BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011215
(491 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|147862940|emb|CAN83206.1| hypothetical protein VITISV_019937 [Vitis vinifera]
Length = 566
Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/539 (72%), Positives = 423/539 (78%), Gaps = 51/539 (9%)
Query: 1 MTKKRKNNGSADEDRH---VKSVKVVEQSSPSPPRLGFENPLLPLANTYDDDDEEEEYGG 57
M KR++N DE R +K K +++SSP P L FEN L LA+ DDDDE+EE
Sbjct: 1 MKTKREDNSDEDEGREFPDLKRQKKLDESSPPPASLAFENALHTLASYDDDDDEKEEEEM 60
Query: 58 RGDSGAKVGQNGRTGEDDDEDKDEDEDDLA-------NGYGQGQRSRLVEVRRDCPYLDT 110
+ SG + ++ R E + E+ DD Q +RSRLVEVRRDCPYLDT
Sbjct: 61 KEASGLRGREDNRRAERNGHRDGEEYDDDDDDDDDPHQEANQVKRSRLVEVRRDCPYLDT 120
Query: 111 VNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTE 170
VNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTE
Sbjct: 121 VNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTE 180
Query: 171 KVYCLPDGYEINDPSLEDIRHV---------------------------------GLNNI 197
KVYCLPDGYEINDPSL+DIRHV GLNNI
Sbjct: 181 KVYCLPDGYEINDPSLDDIRHVLNPRFTREQVDQLDKNKQWSRALDGSDYLPGMVGLNNI 240
Query: 198 KETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPH 257
KETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFG+LTRKIWHARNFKGQVSPH
Sbjct: 241 KETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGELTRKIWHARNFKGQVSPH 300
Query: 258 EFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKE 317
EFLQAVMKASKKRFRIG QS+PVEFMSWLLNTLH DLR +KKN+SIIY CFQGELEVVKE
Sbjct: 301 EFLQAVMKASKKRFRIGAQSDPVEFMSWLLNTLHGDLRTSKKNSSIIYNCFQGELEVVKE 360
Query: 318 IPKNTI-----SGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKN 372
IP +G+DQN + D+H ++ ET RMPFLMLGLDLPPPPLFKDVMEKN
Sbjct: 361 IPNKGFFEKRENGDDQNK---ATTADEHADVILETCRMPFLMLGLDLPPPPLFKDVMEKN 417
Query: 373 IIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPT 432
IIPQVPLFNILKKFDGE VTEVVRP +ARMRYRVTRLP+Y+ILHMRRFTKNNFF+EKNPT
Sbjct: 418 IIPQVPLFNILKKFDGELVTEVVRPRIARMRYRVTRLPQYLILHMRRFTKNNFFIEKNPT 477
Query: 433 LVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
LVNFPVKNLELKDYIPLP PKENEKLRSKYDLIANIVHDGKP GFYRVFVQRKSEELW
Sbjct: 478 LVNFPVKNLELKDYIPLPAPKENEKLRSKYDLIANIVHDGKPGEGFYRVFVQRKSEELW 536
>gi|356546089|ref|XP_003541464.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Glycine
max]
Length = 563
Score = 718 bits (1853), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/497 (76%), Positives = 409/497 (82%), Gaps = 47/497 (9%)
Query: 37 NPLLPLANTYDDDDEEEEY--------GGRGDSGAKVGQNGRTGEDDDEDKDEDEDDLAN 88
NPL LAN Y D DEEE+Y R + G++ + + GE DD D+++D + +
Sbjct: 42 NPLSGLANNYADIDEEEDYVRRERGSINERRNDGSQHNGHKKYGEADDSDEEDDSHEQFS 101
Query: 89 GYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQ 148
G R+R VEVR+DCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRG+
Sbjct: 102 G-----RNRQVEVRKDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGK 156
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV---------------- 192
KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSL+DIR+V
Sbjct: 157 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLDDIRNVLNPRFAAKEVEQLDKN 216
Query: 193 -----------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVH 235
GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY+HCKSPLVH
Sbjct: 217 KQWSRALDGSSYLPGMVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYQHCKSPLVH 276
Query: 236 RFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR 295
RFG+LTRKIWH RNFKGQVSPHEFLQAVMKASKKRFRIG QS+PVEFMSWLLNTLH+DL+
Sbjct: 277 RFGELTRKIWHTRNFKGQVSPHEFLQAVMKASKKRFRIGAQSDPVEFMSWLLNTLHADLK 336
Query: 296 NTKKNTSIIYECFQGELEVVKEIPKNTIS-GNDQNTEKGSDGGDDHDNITTETSRMPFLM 354
+KKNTSIIYECFQGELEVVKEIP IS + N EK SDG ++ ETS+MPFLM
Sbjct: 337 TSKKNTSIIYECFQGELEVVKEIPNKVISDKKENNAEKLSDGVNERYAFVKETSKMPFLM 396
Query: 355 LGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMI 414
LGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPH+ARM+YRVTRLPKYMI
Sbjct: 397 LGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHIARMQYRVTRLPKYMI 456
Query: 415 LHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKP 474
LHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLR+KYDLIAN+VHDGKP
Sbjct: 457 LHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRTKYDLIANVVHDGKP 516
Query: 475 EGGFYRVFVQRKSEELW 491
GFYRVFVQRKSEELW
Sbjct: 517 GEGFYRVFVQRKSEELW 533
>gi|356534252|ref|XP_003535671.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Glycine
max]
Length = 569
Score = 716 bits (1849), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/509 (74%), Positives = 400/509 (78%), Gaps = 65/509 (12%)
Query: 37 NPLLPLANTYDDDDEEEEYGGRGDSGAKVGQNGRTGEDDDEDKDEDEDDLANGYGQGQ-- 94
NPL LAN Y D DEEE+ R G ++ D + N YG+
Sbjct: 42 NPLSGLANNYADIDEEEDDVRR-----------ERGSVNERSNDGSHHNGHNKYGEADDS 90
Query: 95 -------------RSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGK 141
R+R VEVR+DCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGK
Sbjct: 91 DEEDDDSHEQFTGRNRQVEVRKDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGK 150
Query: 142 YYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV--------- 192
YYQGRG+KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSL+DIRHV
Sbjct: 151 YYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLDDIRHVLNPRFTAKE 210
Query: 193 ------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRH 228
GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY+H
Sbjct: 211 VEQLDKNKQWSRALDGSSYLPGMVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYQH 270
Query: 229 CKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLN 288
CKSPLVHRFG+LTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG QS+PVEFMSWLLN
Sbjct: 271 CKSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGAQSDPVEFMSWLLN 330
Query: 289 TLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISG------NDQNTEKGSDGGDDHDN 342
TLH+DL+ +KKNTSIIYECFQGELEVVKEIP IS N N EK SDG ++
Sbjct: 331 TLHADLKTSKKNTSIIYECFQGELEVVKEIPNKVISDKKENSENQNNAEKLSDGVNERYA 390
Query: 343 ITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARM 402
ETS+MPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPH+ARM
Sbjct: 391 FVKETSKMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHIARM 450
Query: 403 RYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKY 462
+YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLR+KY
Sbjct: 451 QYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRTKY 510
Query: 463 DLIANIVHDGKPEGGFYRVFVQRKSEELW 491
DLIAN+VHDGKP GFYRVFVQRKSEELW
Sbjct: 511 DLIANVVHDGKPGEGFYRVFVQRKSEELW 539
>gi|255559080|ref|XP_002520562.1| ubiquitin specific protease 39 and snrnp assembly factor, putative
[Ricinus communis]
gi|223540222|gb|EEF41795.1| ubiquitin specific protease 39 and snrnp assembly factor, putative
[Ricinus communis]
Length = 557
Score = 701 bits (1810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/533 (71%), Positives = 424/533 (79%), Gaps = 48/533 (9%)
Query: 1 MTKKRKNNGSADEDRHVKSVKVV---EQSSPSPPRLGFENPLLPLANTYDDDDEEEEYGG 57
MT KRK+ G+ + + + S + E +SPS ++ +NPL+P Y+D D+EE Y
Sbjct: 1 MTTKRKDGGNIEIEGYNTSKRQRVGNEHNSPSSLQV-IDNPLVP----YNDVDDEEHYQR 55
Query: 58 RGDSGAKVGQNGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLD 117
+ G G +DDD+D D+D+DD G Q R +E R DCPYLDTVNRQVLD
Sbjct: 56 FEHNNQSNGYQGLKEDDDDDDDDDDDDDDGQGSNQANRRNQLEPREDCPYLDTVNRQVLD 115
Query: 118 FDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPD 177
FDFE+FCSVSLSNLNVYACLVCGKYYQGRG+KSHAYTHSLEAGHHVYINL+TEKVYCLPD
Sbjct: 116 FDFERFCSVSLSNLNVYACLVCGKYYQGRGRKSHAYTHSLEAGHHVYINLQTEKVYCLPD 175
Query: 178 GYEINDPSLEDIRHV---------------------------------GLNNIKETDFVN 204
GYEI DPSL+DIRHV GLNNIKETDFVN
Sbjct: 176 GYEIIDPSLDDIRHVLNPRFSRDQVEQLDRNRQWSRALDGSDYLPGMVGLNNIKETDFVN 235
Query: 205 VTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVM 264
VTIQSLMRVTPLRNFFLIPENY+HC+SPLVHRFG+LTRKIWHARNFKGQVSPHEFLQAVM
Sbjct: 236 VTIQSLMRVTPLRNFFLIPENYQHCRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVM 295
Query: 265 KASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTIS 324
KASKKRFRIG QS+PVEFM+WLLNTLH+DLR +KKN SIIY+CFQGELEVVKEIP I+
Sbjct: 296 KASKKRFRIGQQSDPVEFMAWLLNTLHADLRTSKKNNSIIYDCFQGELEVVKEIPSKAIA 355
Query: 325 GNDQN------TEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVP 378
+N +K +DGG++HD + TETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVP
Sbjct: 356 EKKENDDEQNSIQKTTDGGNEHD-VVTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVP 414
Query: 379 LFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPV 438
LFNILKKFDGETVTEVVRP VARM+YRVTRLP+Y+ILHM+RF KNNFF+EKNPTLVNFPV
Sbjct: 415 LFNILKKFDGETVTEVVRPRVARMKYRVTRLPQYLILHMQRFKKNNFFIEKNPTLVNFPV 474
Query: 439 KNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
KNLELKDYIPLP PKENE+LRSKYDLIANIVHDGKP GFYRVFVQRKSEELW
Sbjct: 475 KNLELKDYIPLPMPKENERLRSKYDLIANIVHDGKPNEGFYRVFVQRKSEELW 527
>gi|449443550|ref|XP_004139540.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Cucumis
sativus]
Length = 550
Score = 700 bits (1807), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/530 (72%), Positives = 424/530 (80%), Gaps = 49/530 (9%)
Query: 1 MTKKRKNNGSADEDR---HVKSVKVVEQSSPSPPRLGFENPLLPLANTYDDDDEEEEYGG 57
M KR++N DE+ +K K++ + SPS ENP LP N Y DDDEEE++
Sbjct: 1 MGSKRRSNSLLDEEELGPDLKRHKLLGEVSPSSSPPASENPQLPGFN-YGDDDEEEDF-- 57
Query: 58 RGDSGAKVGQNGRT--GEDDDEDKDEDEDDLANGYG-QGQRSRLVEVRRDCPYLDTVNRQ 114
K QNG G++ D + DE++D+ + G Q +RSR VEVR+DCPYLDTVNRQ
Sbjct: 58 ------KFKQNGSKYDGDEGDYNDDEEDDEEYDNNGNQVKRSRDVEVRKDCPYLDTVNRQ 111
Query: 115 VLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYC 174
VLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRG+KSHAYTHSLEAGHHVYINLRTEKVYC
Sbjct: 112 VLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYC 171
Query: 175 LPDGYEINDPSLEDIRHV---------------------------------GLNNIKETD 201
LPDGYEINDPSL+DIR+V GLNNIKETD
Sbjct: 172 LPDGYEINDPSLDDIRYVLNPRFAKEQVEQLDKNKQWSRALDGSDYLPGMVGLNNIKETD 231
Query: 202 FVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQ 261
FVNVTIQSLMRVTPLRNFFLIP NY+HC+SPLVHRFG+LTRKIWHARNFKGQVSPHEFLQ
Sbjct: 232 FVNVTIQSLMRVTPLRNFFLIPANYQHCRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQ 291
Query: 262 AVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKN 321
AVMKASKKRFRIG QS+PVEFMSW LNTLHS+LR TKK++SIIYECFQGELEVVKEI
Sbjct: 292 AVMKASKKRFRIGAQSDPVEFMSWFLNTLHSELRITKKSSSIIYECFQGELEVVKEIHSK 351
Query: 322 TISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFN 381
+ +N E+ D G + ++ ETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFN
Sbjct: 352 ALIEKKENGEE-QDAGTEGSSVAMETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFN 410
Query: 382 ILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNL 441
ILKKFDGET+TEVVRP +ARMRYRVTRLP+Y+ILHMRRFTKNNFFVEKNPTLVNFPVKNL
Sbjct: 411 ILKKFDGETITEVVRPRIARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNFPVKNL 470
Query: 442 ELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
ELKDYIPLPTPK+N+KLRSKYDLIANIVHDGKP G+YRVFVQRKSEELW
Sbjct: 471 ELKDYIPLPTPKDNDKLRSKYDLIANIVHDGKPNEGYYRVFVQRKSEELW 520
>gi|449520261|ref|XP_004167152.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Cucumis
sativus]
Length = 550
Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/530 (72%), Positives = 424/530 (80%), Gaps = 49/530 (9%)
Query: 1 MTKKRKNNGSADEDR---HVKSVKVVEQSSPSPPRLGFENPLLPLANTYDDDDEEEEYGG 57
M KR++N DE+ +K K++ + SPS ENP LP N Y DDDEEE++
Sbjct: 1 MGSKRRSNSLLDEEELGPDLKRHKLLGEVSPSSSPPASENPQLPGFN-YGDDDEEEDF-- 57
Query: 58 RGDSGAKVGQNGRT--GEDDDEDKDEDEDDLANGYG-QGQRSRLVEVRRDCPYLDTVNRQ 114
K QNG G++ D + DE++D+ + G Q +RSR VEVR+DCPYLDTVNRQ
Sbjct: 58 ------KFKQNGSKYDGDEGDYNDDEEDDEEYDNNGNQVKRSRDVEVRKDCPYLDTVNRQ 111
Query: 115 VLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYC 174
VLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRG+KSHAYTHSLEAGHHVYINLRTEKVYC
Sbjct: 112 VLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYC 171
Query: 175 LPDGYEINDPSLEDIRHV---------------------------------GLNNIKETD 201
LPDGYEINDPSL+DIR+V GLNNIKETD
Sbjct: 172 LPDGYEINDPSLDDIRYVLNPRFAKEQVEQLDKNKQWSRALDGSDYLPGMVGLNNIKETD 231
Query: 202 FVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQ 261
FVNVTIQSLMRVTPLRNFFLIP NY+HC+SPLVHRFG+LTRKIWHARNFKGQVSPHEFLQ
Sbjct: 232 FVNVTIQSLMRVTPLRNFFLIPANYQHCRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQ 291
Query: 262 AVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKN 321
A+MKASKKRFRIG QS+PVEFMSW LNTLHS+LR TKK++SIIYECFQGELEVVKEI
Sbjct: 292 AIMKASKKRFRIGAQSDPVEFMSWFLNTLHSELRITKKSSSIIYECFQGELEVVKEIHSK 351
Query: 322 TISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFN 381
+ +N E+ D G + ++ ETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFN
Sbjct: 352 ALIEKKENGEE-QDAGTEGSSVAMETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFN 410
Query: 382 ILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNL 441
ILKKFDGET+TEVVRP +ARMRYRVTRLP+Y+ILHMRRFTKNNFFVEKNPTLVNFPVKNL
Sbjct: 411 ILKKFDGETITEVVRPRIARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNFPVKNL 470
Query: 442 ELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
ELKDYIPLPTPK+N+KLRSKYDLIANIVHDGKP G+YRVFVQRKSEELW
Sbjct: 471 ELKDYIPLPTPKDNDKLRSKYDLIANIVHDGKPNEGYYRVFVQRKSEELW 520
>gi|357474209|ref|XP_003607389.1| U4/U6.U5 tri-snRNP-associated protein [Medicago truncatula]
gi|355508444|gb|AES89586.1| U4/U6.U5 tri-snRNP-associated protein [Medicago truncatula]
Length = 544
Score = 697 bits (1800), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/515 (71%), Positives = 400/515 (77%), Gaps = 56/515 (10%)
Query: 14 DRHVKSVKVVEQSSPSPPRLGFENPLLPLANTYDDDDEEEEYGGRGDSGAKVGQNGRTGE 73
D K +V E SSPSPP + NPL LAN Y D DEEE+Y R +NG + +
Sbjct: 19 DFESKRQRVDEDSSPSPPPVNIANPLSGLANNYADIDEEEDYYQRAKGAVSDKRNGESQQ 78
Query: 74 DDDEDKDEDEDDLANGYGQ----GQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
+ + + +D+ D Q G+ SR VEVR+DCPYLDTVNRQVLDFDFEKFCSVSLS
Sbjct: 79 NGHKYEGDDDSDEEEDSNQQLFGGRSSRQVEVRKDCPYLDTVNRQVLDFDFEKFCSVSLS 138
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
NLNVYACLVCGKYYQGRG+KSHAYTHSLEAGHHVYINL TEKV+CLPDGYEI+DPSL+DI
Sbjct: 139 NLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLLTEKVFCLPDGYEIDDPSLDDI 198
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
RHV GLNNIKETDFVNVTIQSLMRVTPL
Sbjct: 199 RHVLNPRFTAKDVEQLDKNKQWSRALDGSSYLPGMVGLNNIKETDFVNVTIQSLMRVTPL 258
Query: 217 RNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQ 276
RNFFLIPENY+HC+S LV RFG+LTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG Q
Sbjct: 259 RNFFLIPENYQHCESQLVQRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGAQ 318
Query: 277 SNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDG 336
S+PVEF+SWLLNTLH+DL+ KKN SIIYECFQGELEVVK+IP S
Sbjct: 319 SDPVEFVSWLLNTLHADLKPPKKNMSIIYECFQGELEVVKDIPNKNASAK---------- 368
Query: 337 GDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVR 396
ETS+MPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGET+TEVVR
Sbjct: 369 ---------ETSKMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETITEVVR 419
Query: 397 PHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENE 456
PH+ARM+YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPK NE
Sbjct: 420 PHIARMQYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKANE 479
Query: 457 KLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
KLR+KYDLIANIVHDGKP G YR FVQRKSEELW
Sbjct: 480 KLRTKYDLIANIVHDGKPGEGSYRAFVQRKSEELW 514
>gi|224089613|ref|XP_002308779.1| predicted protein [Populus trichocarpa]
gi|222854755|gb|EEE92302.1| predicted protein [Populus trichocarpa]
Length = 557
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/536 (69%), Positives = 410/536 (76%), Gaps = 54/536 (10%)
Query: 1 MTKKRKNN--GSADEDRHVKSVKVVEQSSPSPPRLGFENPLLPLANTYDDDDEEEEYGGR 58
M KR+ + GS +K +V EQSS S G NPL+P Y+D D+E+E R
Sbjct: 1 MKNKREEDDMGSEVSGSVLKRQRVDEQSSAS----GIGNPLVP----YNDVDDEDEDFER 52
Query: 59 GDSGAKVGQNGRTGEDDDEDKDEDEDDLANGYGQG----QRSRLVEVRRDCPYLDTVNRQ 114
G + G + + EDE++ + YGQG +R E R DCPYLDTVNRQ
Sbjct: 53 GKTNNGGGVEESNTQVVAAENGEDEEEEEDVYGQGDSLERRKSQFEPREDCPYLDTVNRQ 112
Query: 115 VLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYC 174
VLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRG+KSHAYTHSLEAGHHVYINLRTEKVYC
Sbjct: 113 VLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYC 172
Query: 175 LPDGYEINDPSLEDIRHV---------------------------------GLNNIKETD 201
LPDGYEI DPSL+DIRHV GLNNIKETD
Sbjct: 173 LPDGYEIIDPSLDDIRHVLNPRFTRDQVGQIDKNRQWSRALDGSDYLPGMVGLNNIKETD 232
Query: 202 FVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQ 261
FVNVTIQSLMRVTPLRNFFLIPENY+HCKSPLV RFG+L RKIWHARNFKGQVSPHEFLQ
Sbjct: 233 FVNVTIQSLMRVTPLRNFFLIPENYQHCKSPLVQRFGELMRKIWHARNFKGQVSPHEFLQ 292
Query: 262 AVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKN 321
AVMK SKKRFRIG QS+PVEFM+WLLNTLH++LR +KKN SIIYECFQGELEV+KE P
Sbjct: 293 AVMKVSKKRFRIGQQSDPVEFMAWLLNTLHANLRTSKKNNSIIYECFQGELEVIKESPNK 352
Query: 322 TISGNDQNTEKGS------DGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIP 375
I+ QN + S DG HD I TETSRM FLMLGLDLPPPPLFKDVMEKNIIP
Sbjct: 353 AITEKKQNADDQSSDQRITDGVTKHD-IFTETSRMQFLMLGLDLPPPPLFKDVMEKNIIP 411
Query: 376 QVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVN 435
QVPLFNILKKFDG+TVTEVVRP VARM+YRVTRLP+Y+ILHM+RF KNNFF+EKNPTLVN
Sbjct: 412 QVPLFNILKKFDGDTVTEVVRPRVARMKYRVTRLPRYLILHMQRFKKNNFFIEKNPTLVN 471
Query: 436 FPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
FPVKNLELKD+IPLP PKENE+LRSKYDLIANIVHDGKP GFYRVFVQRKSEELW
Sbjct: 472 FPVKNLELKDFIPLPMPKENERLRSKYDLIANIVHDGKPNEGFYRVFVQRKSEELW 527
>gi|326495966|dbj|BAJ90605.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 553
Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/504 (72%), Positives = 404/504 (80%), Gaps = 46/504 (9%)
Query: 25 QSSPSPPRLGFEN---PLLPLANTYDDDDEEEEYGGRGDSGAKVGQNGRTGEDDDEDKDE 81
+++ PR G E+ LL LAN Y D++EEE RG + NGR E ++++ +E
Sbjct: 29 EAAEKRPRAGDESEGASLLGLAN-YADEEEEERGAPRGHA------NGRPREQEEDEDEE 81
Query: 82 DEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGK 141
+E+D + R VE+RRDCPYLDTVNRQVLDFDFEKFCS+SLSNLNVYACLVCGK
Sbjct: 82 EEEDERRAPERRPRQ--VELRRDCPYLDTVNRQVLDFDFEKFCSISLSNLNVYACLVCGK 139
Query: 142 YYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV--------- 192
YYQGRG KSHAYTHSLEAGHHV+INL+TEKVYCLPDGYEINDPSLEDIRHV
Sbjct: 140 YYQGRGLKSHAYTHSLEAGHHVFINLQTEKVYCLPDGYEINDPSLEDIRHVLNPRFAREQ 199
Query: 193 ------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRH 228
GLNNIKETDFVNVTIQSLMR+TPLRNFFLIPENY+H
Sbjct: 200 VKILDKNKQWSRALDGSNYLPGMVGLNNIKETDFVNVTIQSLMRITPLRNFFLIPENYQH 259
Query: 229 CKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLN 288
KSPLVHRFG+LTRKIWHARNFKGQVSPHEFLQAVMKAS+K+F+IGVQS+PVEFMSWLLN
Sbjct: 260 SKSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASEKKFQIGVQSDPVEFMSWLLN 319
Query: 289 TLHSDLRNT-KKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTET 347
TLH+ LR++ KKN SIIY+CFQGELEVVKEI + + ++QN E S D + T+T
Sbjct: 320 TLHAKLRSSKKKNRSIIYDCFQGELEVVKEIHRKHLVDDEQNGEASSQVETTSDGMVTQT 379
Query: 348 SRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVT 407
SR+PFLMLGLDLPPPPLFKD MEKNIIPQVPLFNILKKFDGETVTEVVRP +ARMRYRV
Sbjct: 380 SRVPFLMLGLDLPPPPLFKDAMEKNIIPQVPLFNILKKFDGETVTEVVRPSIARMRYRVI 439
Query: 408 RLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIAN 467
RLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLP PKENEKLRSKYDLIAN
Sbjct: 440 RLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPKPKENEKLRSKYDLIAN 499
Query: 468 IVHDGKPEGGFYRVFVQRKSEELW 491
IVHDGKP G YRVFVQRKSEE W
Sbjct: 500 IVHDGKPGEGCYRVFVQRKSEEAW 523
>gi|357110906|ref|XP_003557256.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like
[Brachypodium distachyon]
Length = 546
Score = 670 bits (1729), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/427 (80%), Positives = 364/427 (85%), Gaps = 34/427 (7%)
Query: 99 VEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLE 158
VE+RRDCPYLDTVNRQVLDFDFEKFCS+SLSNLNVYACLVCGKYYQGRG KSHAYTHSLE
Sbjct: 90 VELRRDCPYLDTVNRQVLDFDFEKFCSISLSNLNVYACLVCGKYYQGRGLKSHAYTHSLE 149
Query: 159 AGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV-------------------------- 192
AGHHV+INL+TE+VYCLPDGYEINDPSLEDIRHV
Sbjct: 150 AGHHVFINLQTERVYCLPDGYEINDPSLEDIRHVLNPRFAREQVLNLDKNKQWSRALDGS 209
Query: 193 -------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIW 245
GLNNIKETDFVNVTIQSLMR+TPLRNFFLIPENY+H KSPLVHRFG+LTRKIW
Sbjct: 210 NYLPGMVGLNNIKETDFVNVTIQSLMRITPLRNFFLIPENYQHSKSPLVHRFGELTRKIW 269
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK-KNTSII 304
HARNFKGQVSPHEFLQAVMKAS+K+F+IGVQS+PVEFMSWLLNTLH+ LR++K KN SII
Sbjct: 270 HARNFKGQVSPHEFLQAVMKASEKKFQIGVQSDPVEFMSWLLNTLHAKLRSSKRKNRSII 329
Query: 305 YECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPL 364
Y+CFQGELEVVKEI + I G++QN E S D + TETSR+PFLMLGLDLPPPPL
Sbjct: 330 YDCFQGELEVVKEIHRKHIVGDEQNGESSSQVETTSDGMVTETSRVPFLMLGLDLPPPPL 389
Query: 365 FKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNN 424
FKD MEKNIIPQVPLFNILKKFDGE VTEVVRP +ARMRYRV RLPKYMILHMRRFTKNN
Sbjct: 390 FKDAMEKNIIPQVPLFNILKKFDGEAVTEVVRPSIARMRYRVIRLPKYMILHMRRFTKNN 449
Query: 425 FFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQ 484
FFVEKNPTLVNFPVKNLELKDYIPLP PKE EKLRSKYDLIANIVHDGKP G YRVFVQ
Sbjct: 450 FFVEKNPTLVNFPVKNLELKDYIPLPKPKEKEKLRSKYDLIANIVHDGKPGEGCYRVFVQ 509
Query: 485 RKSEELW 491
RKSEE W
Sbjct: 510 RKSEEAW 516
>gi|242093968|ref|XP_002437474.1| hypothetical protein SORBIDRAFT_10g027800 [Sorghum bicolor]
gi|241915697|gb|EER88841.1| hypothetical protein SORBIDRAFT_10g027800 [Sorghum bicolor]
Length = 549
Score = 666 bits (1718), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/475 (73%), Positives = 379/475 (79%), Gaps = 63/475 (13%)
Query: 79 KDEDEDDLANGYGQGQRS-----------------------RLVEVRRDCPYLDTVNRQV 115
+DEDED+ A G+ G+R+ R E+RRDCPYLDTVNRQV
Sbjct: 46 EDEDEDEAARGHANGRRAVEPDEEEDDDEEDDVRRAPERRPRQAELRRDCPYLDTVNRQV 105
Query: 116 LDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCL 175
LDFDFEKFCS+SLSNLNVYACLVCGKY+QGRG KSHAYTHSLEAGHHV+INL+TEK YCL
Sbjct: 106 LDFDFEKFCSISLSNLNVYACLVCGKYFQGRGLKSHAYTHSLEAGHHVFINLQTEKAYCL 165
Query: 176 PDGYEINDPSLEDIRHV---------------------------------GLNNIKETDF 202
PDGYEINDPSLEDIRHV GLNNIKETDF
Sbjct: 166 PDGYEINDPSLEDIRHVLNPRFTKEQVLNLDKNKQWSRALDGSNYLPGMVGLNNIKETDF 225
Query: 203 VNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQA 262
VNVTIQSLMRVTPLRNFFLIPENY+H KSPLVHRFG+LTRKIWHARNFKGQVSPHEFLQA
Sbjct: 226 VNVTIQSLMRVTPLRNFFLIPENYQHRKSPLVHRFGELTRKIWHARNFKGQVSPHEFLQA 285
Query: 263 VMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT-KKNTSIIYECFQGELEVVKEIPKN 321
VMKAS KRF+IGVQS+PVEFMSWLLNTLH+ L+++ KKN SII++CFQGELEVVKE+ +
Sbjct: 286 VMKASDKRFQIGVQSDPVEFMSWLLNTLHAKLKSSKKKNRSIIHDCFQGELEVVKEVHRK 345
Query: 322 TI-----SGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQ 376
I G++ N E GS G D I TETS++PFLMLGLDLPPPPLFKD MEKNIIPQ
Sbjct: 346 HIMEKREDGDEPNGEAGSVVGTA-DGIVTETSKVPFLMLGLDLPPPPLFKDAMEKNIIPQ 404
Query: 377 VPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNF 436
VPLFNILKKFDGETVTEVVRP +ARMRYRVTRLPKY+ILHMRRFTKNNFFVEKNPTLVNF
Sbjct: 405 VPLFNILKKFDGETVTEVVRPSIARMRYRVTRLPKYLILHMRRFTKNNFFVEKNPTLVNF 464
Query: 437 PVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
PVKNLELKDYIPLP PKEN KLRSKYDLIANIVHDGKP G YRVFVQRKSEE W
Sbjct: 465 PVKNLELKDYIPLPKPKENHKLRSKYDLIANIVHDGKPGEGCYRVFVQRKSEEAW 519
>gi|125605649|gb|EAZ44685.1| hypothetical protein OsJ_29311 [Oryza sativa Japonica Group]
Length = 554
Score = 664 bits (1713), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/436 (78%), Positives = 366/436 (83%), Gaps = 45/436 (10%)
Query: 94 QRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAY 153
+R R VE+RRDCPYLDTVNRQVLDFDFEKFCS+SLSNLNVYACLVCGKYYQGRG KSHAY
Sbjct: 96 RRPRQVELRRDCPYLDTVNRQVLDFDFEKFCSISLSNLNVYACLVCGKYYQGRGLKSHAY 155
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV--------------------- 192
THSLEAGHHV+INL+TEK YCLPDGYEINDPSLEDIRHV
Sbjct: 156 THSLEAGHHVFINLQTEKAYCLPDGYEINDPSLEDIRHVLNPRFTTEQVRNLDRNKQWSR 215
Query: 193 ------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDL 240
GLNNIKETDFVNVTIQSLMR+TPLRNFFLIPENYRH KSPLVHRFG+L
Sbjct: 216 ALDGSNYLPGMVGLNNIKETDFVNVTIQSLMRITPLRNFFLIPENYRHSKSPLVHRFGEL 275
Query: 241 TRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKN 300
TRKIWHARNFKGQVSPHEFLQAVMKAS KRF+IGVQS+PVEFMSWLLNT+HS L++ K+N
Sbjct: 276 TRKIWHARNFKGQVSPHEFLQAVMKASDKRFQIGVQSDPVEFMSWLLNTMHSKLKSRKRN 335
Query: 301 TSIIYECFQGELEVVKEIPKNTI-----SGNDQNTEKGSDGGDDHDNITTETSRMPFLML 355
SII++CFQGELEVVKE K I G++QN + GSD I TETSR+PFLML
Sbjct: 336 RSIIHDCFQGELEVVKEFHKKHIVEKKEDGDEQNGDAGSD-------IVTETSRVPFLML 388
Query: 356 GLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMIL 415
GLDLPPPPLFKD MEKNIIPQVPLFNILKKFDGETVTEVVRP +ARMRYRV RLPKY+IL
Sbjct: 389 GLDLPPPPLFKDAMEKNIIPQVPLFNILKKFDGETVTEVVRPSIARMRYRVIRLPKYLIL 448
Query: 416 HMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPE 475
HMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLP PK++EKLRSKYDLIAN+VHDGKP
Sbjct: 449 HMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPKPKDSEKLRSKYDLIANVVHDGKPG 508
Query: 476 GGFYRVFVQRKSEELW 491
G YRVFVQRKSEE W
Sbjct: 509 EGCYRVFVQRKSEEAW 524
>gi|115479091|ref|NP_001063139.1| Os09g0407900 [Oryza sativa Japonica Group]
gi|51091509|dbj|BAD36247.1| putative U4/U6.U5 tri-snRNP-associated 65 kDa protein [Oryza sativa
Japonica Group]
gi|51091565|dbj|BAD36302.1| putative U4/U6.U5 tri-snRNP-associated 65 kDa protein [Oryza sativa
Japonica Group]
gi|113631372|dbj|BAF25053.1| Os09g0407900 [Oryza sativa Japonica Group]
gi|215678580|dbj|BAG92235.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 663 bits (1711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/436 (78%), Positives = 366/436 (83%), Gaps = 45/436 (10%)
Query: 94 QRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAY 153
+R R VE+RRDCPYLDTVNRQVLDFDFEKFCS+SLSNLNVYACLVCGKYYQGRG KSHAY
Sbjct: 96 RRPRQVELRRDCPYLDTVNRQVLDFDFEKFCSISLSNLNVYACLVCGKYYQGRGLKSHAY 155
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV--------------------- 192
THSLEAGHHV+INL+TEK YCLPDGYEINDPSLEDIRHV
Sbjct: 156 THSLEAGHHVFINLQTEKAYCLPDGYEINDPSLEDIRHVLNPRFTTEQVRNLDRNKQWSR 215
Query: 193 ------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDL 240
GLNNIKETDFVNVTIQSLMR+TPLRNFFLIPENYRH KSPLVHRFG+L
Sbjct: 216 ALDGSNYLPGMVGLNNIKETDFVNVTIQSLMRITPLRNFFLIPENYRHSKSPLVHRFGEL 275
Query: 241 TRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKN 300
TRKIWHARNFKGQVSPHEFLQAVMKAS KRF+IGVQS+PVEFMSWLLNT+HS L++ K+N
Sbjct: 276 TRKIWHARNFKGQVSPHEFLQAVMKASDKRFQIGVQSDPVEFMSWLLNTMHSKLKSRKRN 335
Query: 301 TSIIYECFQGELEVVKEIPKNTI-----SGNDQNTEKGSDGGDDHDNITTETSRMPFLML 355
SII++CFQGELEVVKE K I G++QN + GSD I TETSR+PFLML
Sbjct: 336 RSIIHDCFQGELEVVKEFHKKHIVEKKEDGDEQNGDAGSD-------IVTETSRVPFLML 388
Query: 356 GLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMIL 415
GLDLPPPPLFKD MEKNIIPQVPLFNILKKFDGETVTEVVRP +ARMRYRV RLPKY+IL
Sbjct: 389 GLDLPPPPLFKDAMEKNIIPQVPLFNILKKFDGETVTEVVRPSIARMRYRVIRLPKYLIL 448
Query: 416 HMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPE 475
HMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLP PK++EKLRSKYDLIAN+VHDGKP
Sbjct: 449 HMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPKPKDSEKLRSKYDLIANVVHDGKPG 508
Query: 476 GGFYRVFVQRKSEELW 491
G YRVFVQRKSEE W
Sbjct: 509 EGCYRVFVQRKSEEAW 524
>gi|125563679|gb|EAZ09059.1| hypothetical protein OsI_31320 [Oryza sativa Indica Group]
Length = 555
Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/436 (78%), Positives = 366/436 (83%), Gaps = 45/436 (10%)
Query: 94 QRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAY 153
+R R VE+RRDCPYLDTVNRQVLDFDFEKFCS+SLSNLNVYACLVCGKYYQGRG KSHAY
Sbjct: 97 RRPRQVELRRDCPYLDTVNRQVLDFDFEKFCSISLSNLNVYACLVCGKYYQGRGLKSHAY 156
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV--------------------- 192
THSLEAGHHV+INL+TEK YCLPDGYEINDPSLEDIRHV
Sbjct: 157 THSLEAGHHVFINLQTEKAYCLPDGYEINDPSLEDIRHVLNPRFTTEQVRNLDRNKQWSR 216
Query: 193 ------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDL 240
GLNNIKETDFVNVTIQSLMR+TPLRNFFLIPENYRH KSPLVHRFG+L
Sbjct: 217 ALDGSNYLPGMVGLNNIKETDFVNVTIQSLMRITPLRNFFLIPENYRHSKSPLVHRFGEL 276
Query: 241 TRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKN 300
TRKIWHARNFKGQVSPHEFLQAVMKAS KRF+IGVQS+PVEFMSWLLNT+HS L++ K+N
Sbjct: 277 TRKIWHARNFKGQVSPHEFLQAVMKASDKRFQIGVQSDPVEFMSWLLNTMHSKLKSRKRN 336
Query: 301 TSIIYECFQGELEVVKEIPKNTI-----SGNDQNTEKGSDGGDDHDNITTETSRMPFLML 355
SII++CFQGELEVVKE K I G++QN + GSD I TETSR+PFLML
Sbjct: 337 RSIIHDCFQGELEVVKEFHKKHIVEKKEDGDEQNGDAGSD-------IVTETSRVPFLML 389
Query: 356 GLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMIL 415
GLDLPPPPLFKD MEKNIIPQVPLFNILKKFDGETVTEVVRP +ARMRYRV RLPKY+IL
Sbjct: 390 GLDLPPPPLFKDAMEKNIIPQVPLFNILKKFDGETVTEVVRPSIARMRYRVIRLPKYLIL 449
Query: 416 HMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPE 475
HMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLP PK+++KLRSKYDLIAN+VHDGKP
Sbjct: 450 HMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPKPKDSKKLRSKYDLIANVVHDGKPG 509
Query: 476 GGFYRVFVQRKSEELW 491
G YRVFVQRKSEE W
Sbjct: 510 EGCYRVFVQRKSEEAW 525
>gi|224137344|ref|XP_002322534.1| predicted protein [Populus trichocarpa]
gi|222867164|gb|EEF04295.1| predicted protein [Populus trichocarpa]
Length = 530
Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/520 (69%), Positives = 401/520 (77%), Gaps = 58/520 (11%)
Query: 9 GSADEDRHVKSVKVVEQSSPSPPRLGFENPLLPLANTYDDDDEEEEYGGRGDSGAKV--- 65
G+ + K ++ EQSS S G ENPL+P N DD++E+ E G + G +V
Sbjct: 2 GTEESGGVSKRQRLDEQSSAS----GIENPLVPY-NDVDDEEEDFERGRTANGGGRVEEN 56
Query: 66 -GQNGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFC 124
GQ ++E+++E+ED +R E R DCPYLDTVNRQVLDFDFEKFC
Sbjct: 57 RGQVVAAENGEEEEEEEEEDLYGEENSLEKRKSQFEPREDCPYLDTVNRQVLDFDFEKFC 116
Query: 125 SVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDP 184
SVSLSNLNVYACLVCGKYYQGRG+KSHAYTHSLEAGHHVY+NLRTEKVYCLPDGYEI DP
Sbjct: 117 SVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYVNLRTEKVYCLPDGYEIIDP 176
Query: 185 SLEDIRHV---------------------------------GLNNIKETDFVNVTIQSLM 211
SL+DIRHV GLNNIKETDFVNVTIQSLM
Sbjct: 177 SLDDIRHVLNPRFTRDQVKQLDKNRQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQSLM 236
Query: 212 RVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRF 271
RVTPLRNFFLIPENY+HCKSPLV R+G+LTRKIWHARNFKGQVSPHEFLQAVMKASKKRF
Sbjct: 237 RVTPLRNFFLIPENYQHCKSPLVQRYGELTRKIWHARNFKGQVSPHEFLQAVMKASKKRF 296
Query: 272 RIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTE 331
RIG QS+PVEFM+WLLNTLH++LR KKN SIIYECFQGELEVVKEIP I+ +N
Sbjct: 297 RIGQQSDPVEFMAWLLNTLHTNLRTLKKNNSIIYECFQGELEVVKEIPNKAITEKKEN-- 354
Query: 332 KGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETV 391
ETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE+V
Sbjct: 355 --------------ETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGESV 400
Query: 392 TEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPT 451
TEVVRP VARM+YRV RLP+Y+ILHM+RF KNNFF+EKNPTLVNFPVKNLELKD+IPLP
Sbjct: 401 TEVVRPRVARMKYRVIRLPQYLILHMQRFKKNNFFIEKNPTLVNFPVKNLELKDFIPLPM 460
Query: 452 PKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
PKENE+LRSKYDLIA+IVHDGKP GFYRVFVQRKSEELW
Sbjct: 461 PKENERLRSKYDLIADIVHDGKPNEGFYRVFVQRKSEELW 500
>gi|413934601|gb|AFW69152.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 551
Score = 659 bits (1699), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/437 (78%), Positives = 367/437 (83%), Gaps = 40/437 (9%)
Query: 94 QRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAY 153
+R R VE+RRDCPYLDTVNRQVLDFDFEKFCS+SLSNLNVYACLVCGKY+QGRG KSHAY
Sbjct: 86 RRPRQVELRRDCPYLDTVNRQVLDFDFEKFCSISLSNLNVYACLVCGKYFQGRGLKSHAY 145
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV--------------------- 192
THSLEAGHHV+INL+TEK YCLPDGYEINDPSLEDIRHV
Sbjct: 146 THSLEAGHHVFINLQTEKAYCLPDGYEINDPSLEDIRHVLNPRFTKEQVLNLDKNKQWSR 205
Query: 193 ------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDL 240
GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY+H KSPLVHRFG+L
Sbjct: 206 ALDGSNYLPGMVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYQHSKSPLVHRFGEL 265
Query: 241 TRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT-KK 299
TRKIWHARNFKGQVSPHEFLQAVMKAS K+F+IGVQS+PVEFM+WLLNTLH+ L+++ KK
Sbjct: 266 TRKIWHARNFKGQVSPHEFLQAVMKASDKKFQIGVQSDPVEFMTWLLNTLHAKLKSSKKK 325
Query: 300 NTSIIYECFQGELEVVKEIPKNTI-----SGNDQNTEKGSDGGDDHDNITTETSRMPFLM 354
N SII++CFQGELEVVKE+ + I G + N E GS G D I TETS++PFLM
Sbjct: 326 NRSIIHDCFQGELEVVKEVHRKHIMEKREDGGELNGEAGSVVGTA-DGIVTETSKVPFLM 384
Query: 355 LGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMI 414
LGLDLPPPPLFKD MEKNIIPQVPLFNILKKFDGETVTEVVRP +ARMRYRVTRLPKY+I
Sbjct: 385 LGLDLPPPPLFKDAMEKNIIPQVPLFNILKKFDGETVTEVVRPSIARMRYRVTRLPKYLI 444
Query: 415 LHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKP 474
LHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLP PKEN KLRSKYDLIANIVHDGKP
Sbjct: 445 LHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPKPKENHKLRSKYDLIANIVHDGKP 504
Query: 475 EGGFYRVFVQRKSEELW 491
G YRVFVQRKSEE W
Sbjct: 505 GEGCYRVFVQRKSEEAW 521
>gi|145333717|ref|NP_001078426.1| ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis
thaliana]
gi|23397271|gb|AAN31917.1| unknown protein [Arabidopsis thaliana]
gi|110741459|dbj|BAE98689.1| hypothetical protein [Arabidopsis thaliana]
gi|332659187|gb|AEE84587.1| ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis
thaliana]
Length = 541
Score = 657 bits (1695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/523 (67%), Positives = 404/523 (77%), Gaps = 60/523 (11%)
Query: 8 NGSADEDRHVKSVKVVEQSSPSPPRLGFENPLLPLANTYDDD-----DEEEEYGGRGDSG 62
NG ++E+R VK +V+E+S PP LGF NPLLPLANTYDDD +E+++ RG+
Sbjct: 9 NGVSEEEREVKRKRVMERSDSPPPPLGFNNPLLPLANTYDDDDEEEENEQKKSQARGNGV 68
Query: 63 AKVGQNGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEK 122
AK NG + + +++ +D++D G+G+ SR VEVRRDCPYLDTVNRQVLDFDFE+
Sbjct: 69 AKGEGNGNKVKGEAQEEVDDDEDDDVSKGKGKHSRHVEVRRDCPYLDTVNRQVLDFDFER 128
Query: 123 FCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEIN 182
FCSVSLSNLNVYACLVCGKY+QGR QKSHAYTHSLEAGHHVYINL TEKVYCLPD YEIN
Sbjct: 129 FCSVSLSNLNVYACLVCGKYFQGRSQKSHAYTHSLEAGHHVYINLLTEKVYCLPDSYEIN 188
Query: 183 DPSLEDIRHV---------------------------------GLNNIKETDFVNVTIQS 209
DPSL+DIRHV GLNNI++T+FVNVTIQS
Sbjct: 189 DPSLDDIRHVLNPRFSRAQVNELDKNRQWSRALDGSDYLPGMVGLNNIQKTEFVNVTIQS 248
Query: 210 LMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
LMRVTPLRNFFLIPENY+HCKSPLVHRFG+LTRKIWHARNFKGQVSPHEFLQAVMKASKK
Sbjct: 249 LMRVTPLRNFFLIPENYQHCKSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKK 308
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQN 329
RFRIG QS+PVEFMSWLLNTLH DLR +K +SII++CFQGELEVVKE GN+
Sbjct: 309 RFRIGQQSDPVEFMSWLLNTLHMDLRTSKDASSIIHKCFQGELEVVKE-----FQGNE-- 361
Query: 330 TEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE 389
E SRM FLMLGLDLPPPPLFKDVMEKNIIPQV LF++LKKFDGE
Sbjct: 362 --------------NKEISRMSFLMLGLDLPPPPLFKDVMEKNIIPQVALFDLLKKFDGE 407
Query: 390 TVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIP- 448
TVTEVVRP +ARMRYRV + P+Y++ HM RF KNNFF EKNPTLVNFPVK++EL+DYIP
Sbjct: 408 TVTEVVRPKLARMRYRVIKSPRYLMFHMVRFKKNNFFKEKNPTLVNFPVKDMELRDYIPS 467
Query: 449 LPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
LP E E + SKY+LIANIVHDGKPE G++RVFVQRKS+ELW
Sbjct: 468 LPRAPEGENVCSKYNLIANIVHDGKPEDGYFRVFVQRKSQELW 510
>gi|334186810|ref|NP_001190799.1| U4/U6.U5 tri-snRNP-associated protein 2 [Arabidopsis thaliana]
gi|332659199|gb|AEE84599.1| U4/U6.U5 tri-snRNP-associated protein 2 [Arabidopsis thaliana]
Length = 539
Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/521 (67%), Positives = 399/521 (76%), Gaps = 58/521 (11%)
Query: 8 NGSADEDRHVKSVKVVEQSSPSPPRLGFENPLLPLANTYDDDDEEE-EYGGRGDSGAKVG 66
NG ++E+R VK +V+E+S PP LGF NPLLP AN YDDD+ ++ + R + AK
Sbjct: 9 NGVSEEEREVKRKRVMERSDSPPPPLGFNNPLLPFANAYDDDNNQQNKSQTRCNVVAKGE 68
Query: 67 QNGRT--GEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFC 124
NG GE E D+++DD G+G+ SR VEVRRDCPYLDTVNRQVLDFDFE+FC
Sbjct: 69 GNGNKVKGEAQVEVDDDEDDDDDASKGRGKHSRHVEVRRDCPYLDTVNRQVLDFDFERFC 128
Query: 125 SVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDP 184
SVSLSNLNVYACLVCGKY+QGR QKSHAYTHSLEAGHHVYINL TEKVYCLPD YEINDP
Sbjct: 129 SVSLSNLNVYACLVCGKYFQGRSQKSHAYTHSLEAGHHVYINLLTEKVYCLPDSYEINDP 188
Query: 185 SLEDIRHV---------------------------------GLNNIKETDFVNVTIQSLM 211
SL+DIRHV GLNNI++T+FVNVTIQSLM
Sbjct: 189 SLDDIRHVLNPRFSRAQVNELDKNRQWSRALDGSDYLPGMVGLNNIQKTEFVNVTIQSLM 248
Query: 212 RVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRF 271
RVTPLRNFFLIPENY+HCKSPL HRFG+LTRKIWHARNFKGQVSPHEFLQAVMKASKKRF
Sbjct: 249 RVTPLRNFFLIPENYQHCKSPLGHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKRF 308
Query: 272 RIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTE 331
RIG QS+PVEFMSWLLNTLH DLR +K +SII++CFQGELEVVKE GN+
Sbjct: 309 RIGQQSDPVEFMSWLLNTLHMDLRTSKDASSIIHKCFQGELEVVKE-----YQGNE---- 359
Query: 332 KGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETV 391
E SRMPFLMLGLDLPPPPLFKDVMEKNIIPQV LF++LKKFDGETV
Sbjct: 360 ------------NKEISRMPFLMLGLDLPPPPLFKDVMEKNIIPQVALFDLLKKFDGETV 407
Query: 392 TEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIP-LP 450
TEVVRP +ARMRYRV + P+Y++ HM RF KNNFF EKNPTLVNFPVK++EL+DYIP LP
Sbjct: 408 TEVVRPKLARMRYRVIKSPRYLMFHMVRFKKNNFFKEKNPTLVNFPVKDMELRDYIPSLP 467
Query: 451 TPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
E E + SKY+LIANIVHDGKPE G++RVFVQRKS+ELW
Sbjct: 468 RAPEGENVCSKYNLIANIVHDGKPEDGYFRVFVQRKSQELW 508
>gi|168000765|ref|XP_001753086.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695785|gb|EDQ82127.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 450
Score = 622 bits (1604), Expect = e-175, Method: Compositional matrix adjust.
Identities = 321/439 (73%), Positives = 356/439 (81%), Gaps = 62/439 (14%)
Query: 92 QGQRSRL-----VEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGR 146
+ +RSR +E+R+DCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKY+QGR
Sbjct: 5 EAERSRAGLRRDIELRKDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYFQGR 64
Query: 147 GQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH--------------- 191
G+KSHAYTHSLEAGHHV+INL TEKVYCLPDGYE+NDPSL+DIRH
Sbjct: 65 GRKSHAYTHSLEAGHHVFINLHTEKVYCLPDGYEVNDPSLDDIRHVLNPRFTRAQAEQLD 124
Query: 192 ------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPL 233
VG+NNIKE DFVNVTIQSLMRVTPLRN+FL+PENY+HCKSPL
Sbjct: 125 KIKQWSRALDGSDYLPGMVGINNIKENDFVNVTIQSLMRVTPLRNYFLLPENYKHCKSPL 184
Query: 234 VHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSD 293
V RFG+LT+KIWH +NFKGQVSPHEFLQAVM ASKKRFRIGVQS+PVEFMSWLLNTLH+D
Sbjct: 185 VQRFGELTKKIWHTKNFKGQVSPHEFLQAVMVASKKRFRIGVQSDPVEFMSWLLNTLHTD 244
Query: 294 LRNTKK-NTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPF 352
L TKK N+S+IY+CFQGELEV KE T+K D S+MPF
Sbjct: 245 LGGTKKRNSSVIYKCFQGELEVTKE------------TQKKGD-----------VSKMPF 281
Query: 353 LMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKY 412
LMLGLDLPPPPLFKDVMEKNIIPQ+PLFNILKKFDGETVTEVVRP +ARMRYR+TRLP+Y
Sbjct: 282 LMLGLDLPPPPLFKDVMEKNIIPQIPLFNILKKFDGETVTEVVRPQLARMRYRITRLPQY 341
Query: 413 MILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG 472
+ILHMRRFTKNNFF+EKNPTLVNFPVKNLELKDYIPLP K+ EK R+KYDLIAN+VHDG
Sbjct: 342 IILHMRRFTKNNFFMEKNPTLVNFPVKNLELKDYIPLPKSKDGEKQRTKYDLIANLVHDG 401
Query: 473 KPEGGFYRVFVQRKSEELW 491
KP G YRVFVQRKS+E+W
Sbjct: 402 KPGEGSYRVFVQRKSDEMW 420
>gi|413934600|gb|AFW69151.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 552
Score = 618 bits (1593), Expect = e-174, Method: Compositional matrix adjust.
Identities = 322/414 (77%), Positives = 348/414 (84%), Gaps = 40/414 (9%)
Query: 94 QRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAY 153
+R R VE+RRDCPYLDTVNRQVLDFDFEKFCS+SLSNLNVYACLVCGKY+QGRG KSHAY
Sbjct: 86 RRPRQVELRRDCPYLDTVNRQVLDFDFEKFCSISLSNLNVYACLVCGKYFQGRGLKSHAY 145
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV--------------------- 192
THSLEAGHHV+INL+TEK YCLPDGYEINDPSLEDIRHV
Sbjct: 146 THSLEAGHHVFINLQTEKAYCLPDGYEINDPSLEDIRHVLNPRFTKEQVLNLDKNKQWSR 205
Query: 193 ------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDL 240
GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY+H KSPLVHRFG+L
Sbjct: 206 ALDGSNYLPGMVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYQHSKSPLVHRFGEL 265
Query: 241 TRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT-KK 299
TRKIWHARNFKGQVSPHEFLQAVMKAS K+F+IGVQS+PVEFM+WLLNTLH+ L+++ KK
Sbjct: 266 TRKIWHARNFKGQVSPHEFLQAVMKASDKKFQIGVQSDPVEFMTWLLNTLHAKLKSSKKK 325
Query: 300 NTSIIYECFQGELEVVKEIPKNTI-----SGNDQNTEKGSDGGDDHDNITTETSRMPFLM 354
N SII++CFQGELEVVKE+ + I G + N E GS G D I TETS++PFLM
Sbjct: 326 NRSIIHDCFQGELEVVKEVHRKHIMEKREDGGELNGEAGSVVGTA-DGIVTETSKVPFLM 384
Query: 355 LGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMI 414
LGLDLPPPPLFKD MEKNIIPQVPLFNILKKFDGETVTEVVRP +ARMRYRVTRLPKY+I
Sbjct: 385 LGLDLPPPPLFKDAMEKNIIPQVPLFNILKKFDGETVTEVVRPSIARMRYRVTRLPKYLI 444
Query: 415 LHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANI 468
LHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLP PKEN KLRSKYDLIAN+
Sbjct: 445 LHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPKPKENHKLRSKYDLIANL 498
>gi|226497272|ref|NP_001152034.1| LOC100285671 [Zea mays]
gi|195652005|gb|ACG45470.1| USP39 protein [Zea mays]
Length = 552
Score = 617 bits (1592), Expect = e-174, Method: Compositional matrix adjust.
Identities = 322/414 (77%), Positives = 348/414 (84%), Gaps = 40/414 (9%)
Query: 94 QRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAY 153
+R R VE+RRDCPYLDTVNRQVLDFDFEKFCS+SLSNLNVYACLVCGKY+QGRG KSHAY
Sbjct: 86 RRPRQVELRRDCPYLDTVNRQVLDFDFEKFCSISLSNLNVYACLVCGKYFQGRGLKSHAY 145
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV--------------------- 192
THSLEAGHHV+INL+TEK YCLPDGYEINDPSLEDIRHV
Sbjct: 146 THSLEAGHHVFINLQTEKAYCLPDGYEINDPSLEDIRHVLNPRFTKEQVLNLDKNKQWSR 205
Query: 193 ------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDL 240
GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY+H KSPLVHRFG+L
Sbjct: 206 ALDGSNYLPGMVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYQHSKSPLVHRFGEL 265
Query: 241 TRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT-KK 299
TRKIWHARNFKGQVSPHEFLQAVMKAS K+F+IGVQS+PVEFM+WLLNTLH+ L+++ KK
Sbjct: 266 TRKIWHARNFKGQVSPHEFLQAVMKASDKKFQIGVQSDPVEFMTWLLNTLHAKLKSSKKK 325
Query: 300 NTSIIYECFQGELEVVKEIPKNTI-----SGNDQNTEKGSDGGDDHDNITTETSRMPFLM 354
N SII++CFQGELEVVKE+ + I G + N E GS G D I TETS++PFLM
Sbjct: 326 NRSIIHDCFQGELEVVKEVHRKHIMEKREDGGELNGEAGSVVGTA-DGIVTETSKVPFLM 384
Query: 355 LGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMI 414
LGLDLPPPPLFKD MEKNIIPQVPLFNILKKFDGETVTEVVRP +ARMRYRVTRLPKY+I
Sbjct: 385 LGLDLPPPPLFKDAMEKNIIPQVPLFNILKKFDGETVTEVVRPSIARMRYRVTRLPKYLI 444
Query: 415 LHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANI 468
LHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLP PKEN KLRSKYDLIAN+
Sbjct: 445 LHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPKPKENHKLRSKYDLIANM 498
>gi|22328871|ref|NP_193966.2| U4/U6.U5 tri-snRNP-associated protein 2 [Arabidopsis thaliana]
gi|18087625|gb|AAL58942.1|AF462856_1 AT4g22410/F7K2_7 [Arabidopsis thaliana]
gi|33589748|gb|AAQ22640.1| At4g22410/F7K2_7 [Arabidopsis thaliana]
gi|332659198|gb|AEE84598.1| U4/U6.U5 tri-snRNP-associated protein 2 [Arabidopsis thaliana]
Length = 510
Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust.
Identities = 342/518 (66%), Positives = 384/518 (74%), Gaps = 81/518 (15%)
Query: 8 NGSADEDRHVKSVKVVEQSSPSPPRLGFENPLLPLANTYDDDDEEEEYGGRGDSGAKVGQ 67
NG ++E+R VK +V+E+S PP PL+ G G+ G KV
Sbjct: 9 NGVSEEEREVKRKRVMERSDSPPP------PLVA--------------KGEGN-GNKV-- 45
Query: 68 NGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVS 127
GE E D+++DD G+G+ SR VEVRRDCPYLDTVNRQVLDFDFE+FCSVS
Sbjct: 46 ---KGEAQVEVDDDEDDDDDASKGRGKHSRHVEVRRDCPYLDTVNRQVLDFDFERFCSVS 102
Query: 128 LSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLE 187
LSNLNVYACLVCGKY+QGR QKSHAYTHSLEAGHHVYINL TEKVYCLPD YEINDPSL+
Sbjct: 103 LSNLNVYACLVCGKYFQGRSQKSHAYTHSLEAGHHVYINLLTEKVYCLPDSYEINDPSLD 162
Query: 188 DIRHV---------------------------------GLNNIKETDFVNVTIQSLMRVT 214
DIRHV GLNNI++T+FVNVTIQSLMRVT
Sbjct: 163 DIRHVLNPRFSRAQVNELDKNRQWSRALDGSDYLPGMVGLNNIQKTEFVNVTIQSLMRVT 222
Query: 215 PLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG 274
PLRNFFLIPENY+HCKSPL HRFG+LTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG
Sbjct: 223 PLRNFFLIPENYQHCKSPLGHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG 282
Query: 275 VQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGS 334
QS+PVEFMSWLLNTLH DLR +K +SII++CFQGELEVVKE GN+
Sbjct: 283 QQSDPVEFMSWLLNTLHMDLRTSKDASSIIHKCFQGELEVVKE-----YQGNE------- 330
Query: 335 DGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEV 394
E SRMPFLMLGLDLPPPPLFKDVMEKNIIPQV LF++LKKFDGETVTEV
Sbjct: 331 ---------NKEISRMPFLMLGLDLPPPPLFKDVMEKNIIPQVALFDLLKKFDGETVTEV 381
Query: 395 VRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIP-LPTPK 453
VRP +ARMRYRV + P+Y++ HM RF KNNFF EKNPTLVNFPVK++EL+DYIP LP
Sbjct: 382 VRPKLARMRYRVIKSPRYLMFHMVRFKKNNFFKEKNPTLVNFPVKDMELRDYIPSLPRAP 441
Query: 454 ENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
E E + SKY+LIANIVHDGKPE G++RVFVQRKS+ELW
Sbjct: 442 EGENVCSKYNLIANIVHDGKPEDGYFRVFVQRKSQELW 479
>gi|297799780|ref|XP_002867774.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297313610|gb|EFH44033.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 506
Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust.
Identities = 337/518 (65%), Positives = 379/518 (73%), Gaps = 85/518 (16%)
Query: 8 NGSADEDRHVKSVKVVEQSSPSPPRLGFENPLLPLANTYDDDDEEEEYGGRGDSGAKVGQ 67
NG ++++R VK +V+E+S PP LG E G G V
Sbjct: 9 NGVSEDEREVKRKRVMERSDSPPPPLG-------------------EGNGNKVRGEVVDD 49
Query: 68 NGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVS 127
+DD+ K G+G+ SR VEVRRDCPYLDTVNRQVLDFDFE+FCSVS
Sbjct: 50 EDDDDDDDEASK-----------GRGKHSRHVEVRRDCPYLDTVNRQVLDFDFERFCSVS 98
Query: 128 LSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLE 187
LSNLNVYACLVCGKY+QGR QKSHAYTHSLEAGHHVYINL TEKVYCLPD YEINDPSL+
Sbjct: 99 LSNLNVYACLVCGKYFQGRSQKSHAYTHSLEAGHHVYINLLTEKVYCLPDSYEINDPSLD 158
Query: 188 DIRHV---------------------------------GLNNIKETDFVNVTIQSLMRVT 214
DIRHV GLNNI++T+FVNVTIQSLMRVT
Sbjct: 159 DIRHVLNPRFSRAQVEELDKNRQWSRALDGSDYLPGMVGLNNIQKTEFVNVTIQSLMRVT 218
Query: 215 PLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG 274
PLRNFFLIPENY+HCKSPLVHRFG+LTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG
Sbjct: 219 PLRNFFLIPENYQHCKSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG 278
Query: 275 VQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGS 334
QS+PVEFMSWLLNTLH DL+ +K +SII++CFQGELEVV+E GN+
Sbjct: 279 QQSDPVEFMSWLLNTLHMDLKTSKDASSIIHKCFQGELEVVRE-----YQGNE------- 326
Query: 335 DGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEV 394
E SRMPFLMLGLDLPPPPLFKDVMEKNIIPQV LF++LKKFDGETVTEV
Sbjct: 327 ---------NKEISRMPFLMLGLDLPPPPLFKDVMEKNIIPQVALFDLLKKFDGETVTEV 377
Query: 395 VRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIP-LPTPK 453
VRP +ARMRYR+T+ P Y++ HM RF KNNFF EKNPTLVNFPVK++EL+DYIP LP
Sbjct: 378 VRPKLARMRYRITKSPPYLMFHMVRFKKNNFFKEKNPTLVNFPVKDMELRDYIPSLPRAP 437
Query: 454 ENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
E EK+ SKY+LIANIVHDGKPE G++RVFVQRKS+ELW
Sbjct: 438 EGEKVCSKYNLIANIVHDGKPEDGYFRVFVQRKSQELW 475
>gi|302771339|ref|XP_002969088.1| hypothetical protein SELMODRAFT_90860 [Selaginella moellendorffii]
gi|302784408|ref|XP_002973976.1| hypothetical protein SELMODRAFT_100186 [Selaginella moellendorffii]
gi|300158308|gb|EFJ24931.1| hypothetical protein SELMODRAFT_100186 [Selaginella moellendorffii]
gi|300163593|gb|EFJ30204.1| hypothetical protein SELMODRAFT_90860 [Selaginella moellendorffii]
Length = 458
Score = 609 bits (1570), Expect = e-171, Method: Compositional matrix adjust.
Identities = 318/426 (74%), Positives = 345/426 (80%), Gaps = 54/426 (12%)
Query: 100 EVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEA 159
EVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKY+QGRG+KSHAYTHSLEA
Sbjct: 23 EVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYFQGRGRKSHAYTHSLEA 82
Query: 160 GHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV--------------------------- 192
GHHV+INL +EKVYCLPDGYE++DPSL+DIRHV
Sbjct: 83 GHHVFINLHSEKVYCLPDGYEVDDPSLDDIRHVLNPRFTGAQVSQLDKSKQWARALDGSD 142
Query: 193 ------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWH 246
GLNNIKETDFVNV IQSLMRVTPLR+FFLIPENYRH SPLVHRFG+LTRKIWH
Sbjct: 143 YLPGMVGLNNIKETDFVNVIIQSLMRVTPLRDFFLIPENYRHSSSPLVHRFGELTRKIWH 202
Query: 247 ARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK-KNTSIIY 305
ARNFKGQVSPHEFLQA+M ASKK+FRIGVQS+PVEF SWLLNTLHS+L T +N+SIIY
Sbjct: 203 ARNFKGQVSPHEFLQAIMSASKKKFRIGVQSDPVEFFSWLLNTLHSELGGTTLRNSSIIY 262
Query: 306 ECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLF 365
+CFQGELEV+KE+ +D N E SR+PFLMLGLDLPPPPLF
Sbjct: 263 QCFQGELEVLKEL------QSDPNNR--------------EISRLPFLMLGLDLPPPPLF 302
Query: 366 KDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNF 425
KDVMEKNIIPQVPLFNILKKFDGET TEVVRP ARMRYRVTRLP+Y+ILHMRRF KNNF
Sbjct: 303 KDVMEKNIIPQVPLFNILKKFDGETPTEVVRPQPARMRYRVTRLPRYLILHMRRFKKNNF 362
Query: 426 FVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQR 485
F+EKNPTLVNFPVKNLELKDYIPL + ++K RSKYDLIAN VHDGKP G YRVFVQR
Sbjct: 363 FIEKNPTLVNFPVKNLELKDYIPLGSADGSKKARSKYDLIANTVHDGKPREGSYRVFVQR 422
Query: 486 KSEELW 491
KSEE+W
Sbjct: 423 KSEEVW 428
>gi|2832685|emb|CAA16785.1| putative protein [Arabidopsis thaliana]
gi|7269081|emb|CAB79190.1| putative protein [Arabidopsis thaliana]
Length = 477
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 305/488 (62%), Positives = 350/488 (71%), Gaps = 54/488 (11%)
Query: 8 NGSADEDRHVKSVKVVEQSSPSPPRLGFENPLLPLANTYDDDDEEE-EYGGRGDSGAKVG 66
NG ++E+R VK +V+E+S PP LGF NPLLP AN YDDD+ ++ + R + AK
Sbjct: 9 NGVSEEEREVKRKRVMERSDSPPPPLGFNNPLLPFANAYDDDNNQQNKSQTRCNVVAKGE 68
Query: 67 QNGRT--GEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFC 124
NG GE E D+++DD G+G+ SR VEVRRDCPYLDTVNRQVLDFDFE+FC
Sbjct: 69 GNGNKVKGEAQVEVDDDEDDDDDASKGRGKHSRHVEVRRDCPYLDTVNRQVLDFDFERFC 128
Query: 125 SVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDP 184
SVSLSNLNVYACLVCGKY+QGR QKSHAYTHSLEAGHHVYINL TEKVYCLPD YEINDP
Sbjct: 129 SVSLSNLNVYACLVCGKYFQGRSQKSHAYTHSLEAGHHVYINLLTEKVYCLPDSYEINDP 188
Query: 185 SLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKI 244
SL+DIRHV LN F + L + +R +
Sbjct: 189 SLDDIRHV-LN----PRFSRAQVNEL------------------------DKNRQWSRAL 219
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSII 304
+ G VSPHEFLQAVMKASKKRFRIG QS+PVEFMSWLLNTLH DLR +K +SII
Sbjct: 220 DGSDYLPGMVSPHEFLQAVMKASKKRFRIGQQSDPVEFMSWLLNTLHMDLRTSKDASSII 279
Query: 305 YECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPL 364
++CFQGELEVVKE GN+ E SRMPFLMLGLDLPPPPL
Sbjct: 280 HKCFQGELEVVKE-----YQGNE----------------NKEISRMPFLMLGLDLPPPPL 318
Query: 365 FKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNN 424
FKDVMEKNIIPQV LF++LKKFDGETVTEVVRP +ARMRYRV + P+Y++ HM RF KNN
Sbjct: 319 FKDVMEKNIIPQVALFDLLKKFDGETVTEVVRPKLARMRYRVIKSPRYLMFHMVRFKKNN 378
Query: 425 FFVEKNPTLVNFPVKNLELKDYIP-LPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFV 483
FF EKNPTLVNFPVK++EL+DYIP LP E E + SKY+LIANIVHDGKPE G++RVFV
Sbjct: 379 FFKEKNPTLVNFPVKDMELRDYIPSLPRAPEGENVCSKYNLIANIVHDGKPEDGYFRVFV 438
Query: 484 QRKSEELW 491
QRKS+ELW
Sbjct: 439 QRKSQELW 446
>gi|2832679|emb|CAA16779.1| putative protein [Arabidopsis thaliana]
gi|7269075|emb|CAB79184.1| putative protein [Arabidopsis thaliana]
Length = 974
Score = 533 bits (1373), Expect = e-149, Method: Compositional matrix adjust.
Identities = 312/526 (59%), Positives = 371/526 (70%), Gaps = 64/526 (12%)
Query: 8 NGSADEDRHVKSVKVVEQSSPSPPRLGFENPLLPLANTYDDD-----DEEEEYGGRGDSG 62
NG ++E+R VK +V+E+S PP LGF NPLLPLANTYDDD +E+++ RG+
Sbjct: 440 NGVSEEEREVKRKRVMERSDSPPPPLGFNNPLLPLANTYDDDDEEEENEQKKSQARGNGV 499
Query: 63 AKVGQNGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEK 122
AK NG + + +++ +D++D G+G+ SR VEVRRDCPYLDTVNRQVLDFDFE+
Sbjct: 500 AKGEGNGNKVKGEAQEEVDDDEDDDVSKGKGKHSRHVEVRRDCPYLDTVNRQVLDFDFER 559
Query: 123 FCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEIN 182
FCSVSLSNLNVYACLVCGKY+QGR QKSHAYTHSLEAGHHVYINL TEKVYCLPD YEIN
Sbjct: 560 FCSVSLSNLNVYACLVCGKYFQGRSQKSHAYTHSLEAGHHVYINLLTEKVYCLPDSYEIN 619
Query: 183 DPSLEDIRHVGLN--NIKETDFVNVTIQS-----------LMRVTPLRNFFLIPENYRHC 229
DPSL+DIRHV LN I+ D+ + + + + ++ L F LI +
Sbjct: 620 DPSLDDIRHV-LNPRYIRSCDYYFIVLTAFCVLICEHLEHITLLSCLVKFSLILQFLFMK 678
Query: 230 KSPL-VHRFG-----------DLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQS 277
S L ++RF +R + + G VSPHEFLQAVMKASKKRFRIG QS
Sbjct: 679 ASVLSIYRFSRAQVNELDKNRQWSRALDGSDYLPGMVSPHEFLQAVMKASKKRFRIGQQS 738
Query: 278 NPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGG 337
+PVEFMSWLLNTLH DLR +K +SII++CFQGELEVVKE GN+
Sbjct: 739 DPVEFMSWLLNTLHMDLRTSKDASSIIHKCFQGELEVVKE-----FQGNENK-------- 785
Query: 338 DDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRP 397
E SRM FLMLGLDLPPPPLFKDVMEKNIIPQV LF++LKKFDGETVTEVVRP
Sbjct: 786 --------EISRMSFLMLGLDLPPPPLFKDVMEKNIIPQVALFDLLKKFDGETVTEVVRP 837
Query: 398 HVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTL-----------VNFPVKNLELKDY 446
+ARMRYRV + P+Y++ HM RF KNNFF EKNPTL VNFPVK++EL+DY
Sbjct: 838 KLARMRYRVIKSPRYLMFHMVRFKKNNFFKEKNPTLGSLMPIFSYATVNFPVKDMELRDY 897
Query: 447 IP-LPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
IP LP E E + SKY+LIANIVHDGKPE G++RVFVQRKS+ELW
Sbjct: 898 IPSLPRAPEGENVCSKYNLIANIVHDGKPEDGYFRVFVQRKSQELW 943
>gi|384247659|gb|EIE21145.1| cysteine proteinase [Coccomyxa subellipsoidea C-169]
Length = 484
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 243/452 (53%), Positives = 304/452 (67%), Gaps = 54/452 (11%)
Query: 74 DDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNV 133
DDD D DE L +R+ V +CPYLDTV+RQ LDFDFEK CSVSLS +NV
Sbjct: 17 DDDSDLDEPVQPL-------RRASQVRKGHECPYLDTVSRQNLDFDFEKCCSVSLSPVNV 69
Query: 134 YACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV- 192
YACLVCGKY+QGRGQ++HA+TH+LE GHH+++ L +VYCLP+GYE++D SL+ IR+V
Sbjct: 70 YACLVCGKYFQGRGQQTHAFTHALETGHHMFMKLSDGRVYCLPEGYEVDDRSLDAIRYVL 129
Query: 193 --------------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFF 220
GLNN+K D+VNV +Q+L+RV PLRNFF
Sbjct: 130 NPTFTPEKIASLDTDARWVRSLDGSEYMPGLVGLNNMKANDYVNVIVQALLRVLPLRNFF 189
Query: 221 LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPV 280
L+PENY CKS LV RFG+L RK + RNFKGQVSPHEF+QAVM AS K+F I QS+PV
Sbjct: 190 LLPENYASCKSQLVQRFGELLRKACNPRNFKGQVSPHEFMQAVMTASAKKFTIEKQSDPV 249
Query: 281 EFMSWLLNTLHSDLRNTK-KNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDD 339
+F+SW LN LH+DL K K SII CFQGELE+ T+ + G+
Sbjct: 250 DFLSWFLNMLHADLTGGKRKKASIISRCFQGELEI-------TVEAGTGKAAVPNAAGEV 302
Query: 340 HDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHV 399
D + R+PFLML LDLPP PL+KD +EKNIIPQVP+F +L+KFDG + + ++
Sbjct: 303 RDVV----ERVPFLMLALDLPPAPLYKDALEKNIIPQVPIFELLRKFDGGRIHDDIK--A 356
Query: 400 ARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLR 459
R RYR+TRLP Y++LHM+RFTKNNFF EKNPT+VNFPV+NLEL+D +P+P K E
Sbjct: 357 GRRRYRLTRLPTYLVLHMKRFTKNNFFWEKNPTIVNFPVRNLELRDIVPVPKGKTGEPEA 416
Query: 460 SKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
SKYDL+ NI+HDGK G YR V RK+E+ W
Sbjct: 417 SKYDLVCNILHDGKAGEGTYRAHVHRKAEDAW 448
>gi|302829829|ref|XP_002946481.1| ubiquitin-specific protease 39 [Volvox carteri f. nagariensis]
gi|300268227|gb|EFJ52408.1| ubiquitin-specific protease 39 [Volvox carteri f. nagariensis]
Length = 474
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/432 (55%), Positives = 294/432 (68%), Gaps = 59/432 (13%)
Query: 104 DCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHV 163
+CPYLDT++RQ LDFDFEK CSV+LS +NVY CLVCGKY+QGRG +HAYTHSLE+ HH+
Sbjct: 31 ECPYLDTISRQNLDFDFEKCCSVTLSPVNVYVCLVCGKYFQGRGLNTHAYTHSLESAHHM 90
Query: 164 YINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------G 193
++ L KVYCLPD YE+ D SL+DIRHV G
Sbjct: 91 FMKLDNGKVYCLPDNYEVLDKSLDDIRHVRDPLFRTEEIASLDNSSSISRLLSYMPGLVG 150
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
LNN+K D++NV +Q R+TPLR+FFL P NY C+SPLV RFG+L RK+W+ RNFKGQ
Sbjct: 151 LNNMKNNDYINVIMQICARITPLRDFFLDPANYSDCRSPLVQRFGELLRKMWNTRNFKGQ 210
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGEL 312
VSPHEF+QAV ASKKRF Q +PVE SWLLN LH DL R K SII +C QGEL
Sbjct: 211 VSPHEFVQAVRNASKKRFTADTQCDPVELWSWLLNNLHLDLTRGKPKKPSIITQCLQGEL 270
Query: 313 EVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKN 372
EV T++G + T + G D T R+PFL+LGL+LPP PLFKDV+EKN
Sbjct: 271 EV------TTLAGTGRGTRAATSGED-------VTERVPFLLLGLELPPAPLFKDVLEKN 317
Query: 373 IIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPT 432
IIPQVP+F+I++KFDGET+T+ +R R R+R+TRLP+Y+ LH RRFTKNNFF+EKNPT
Sbjct: 318 IIPQVPIFHIMRKFDGETITDDIR--AGRRRFRITRLPRYLALHYRRFTKNNFFIEKNPT 375
Query: 433 LVNFPVKNLELKDYIPLPTPKENEKL-------------RSKYDLIANIVHDGKPEGGFY 479
LVNFPVK+LEL+D +PLP SKYDL+AN+VHDGK + G Y
Sbjct: 376 LVNFPVKSLELRDILPLPEFPAAAGGAAAGAPDAAAYGSSSKYDLVANLVHDGKADSGTY 435
Query: 480 RVFVQRKSEELW 491
RV V RK E++W
Sbjct: 436 RVHVHRKVEDIW 447
>gi|15235641|ref|NP_193972.1| ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis
thaliana]
gi|5738372|emb|CAB52815.1| putative protein [Arabidopsis thaliana]
gi|7269087|emb|CAB79196.1| putative protein [Arabidopsis thaliana]
gi|332659205|gb|AEE84605.1| ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis
thaliana]
Length = 340
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 254/356 (71%), Positives = 275/356 (77%), Gaps = 54/356 (15%)
Query: 111 VNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTE 170
V QVLDF FE+FCSVSLSNLNVYACLVCGKY+QGR QKSHAYTHSLEAGHHVYINL TE
Sbjct: 2 VEFQVLDFHFERFCSVSLSNLNVYACLVCGKYFQGRSQKSHAYTHSLEAGHHVYINLLTE 61
Query: 171 KVYCLPDGYEINDPSLEDIRHV---------------------------------GLNNI 197
KVYCLPD YEINDPSL+DIRHV GLNNI
Sbjct: 62 KVYCLPDSYEINDPSLDDIRHVLNPRFSRAQVNELDKNRQWSRALDGSDYLPGMVGLNNI 121
Query: 198 KETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPH 257
++T+FVNVTIQSLMRVTPLRNFF IPENY+HCKSPLVH FG+LTRKIWHARNFKGQVSPH
Sbjct: 122 QKTEFVNVTIQSLMRVTPLRNFFHIPENYQHCKSPLVHCFGELTRKIWHARNFKGQVSPH 181
Query: 258 EFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKE 317
EFLQAVMKASKKRFRIG QS+PVEFMSWLLNTLH DLR +K +SII++CFQGELEVVKE
Sbjct: 182 EFLQAVMKASKKRFRIGQQSDPVEFMSWLLNTLHMDLRTSKDASSIIHKCFQGELEVVKE 241
Query: 318 IPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQV 377
GN+ E SRM FLMLGLDLPPPPLFKDVMEKNIIPQV
Sbjct: 242 -----FQGNE----------------NKEISRMSFLMLGLDLPPPPLFKDVMEKNIIPQV 280
Query: 378 PLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTL 433
LF++LKKFDGETVTEVVRP +ARMRYRV + P+Y++ HM RF KNNFF EKNPTL
Sbjct: 281 ALFDLLKKFDGETVTEVVRPKLARMRYRVIKSPRYLMFHMVRFKKNNFFKEKNPTL 336
>gi|307102449|gb|EFN50724.1| hypothetical protein CHLNCDRAFT_33393 [Chlorella variabilis]
Length = 513
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 232/450 (51%), Positives = 294/450 (65%), Gaps = 72/450 (16%)
Query: 96 SRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTH 155
SR V +CPYLDT++RQ LDFDFEK CSV+LS NVYACLVCGKY+QGRG + AYTH
Sbjct: 51 SRSVRKGAECPYLDTISRQNLDFDFEKCCSVTLSGHNVYACLVCGKYFQGRGPSTQAYTH 110
Query: 156 SLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV----------------------- 192
+LEAGHH+++ + + +VYCLPD YE+ D SL DI++V
Sbjct: 111 ALEAGHHMFMKVESGRVYCLPDMYEVQDRSLADIQYVLNPTFTAEDVSKLDGGVSWARAL 170
Query: 193 ----------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTR 242
GLNN+K+ D+ NV +Q+L+RV P+R+FFL PENY C+S LV RFG+L R
Sbjct: 171 DGSEYMPGLVGLNNMKQNDYANVVVQALIRVWPIRDFFLRPENYASCQSLLVQRFGELVR 230
Query: 243 KIWHARNFKGQVSPHEFLQA--------------------VMKASKKRFRIGVQSNPVEF 282
K+W+ R FKGQVSPHEF+QA VM AS KR I QS+P+EF
Sbjct: 231 KVWNPRAFKGQVSPHEFMQARGSWLLARSSWHAAAGSCRAVMSASSKRLIIDRQSDPLEF 290
Query: 283 MSWLLNTLHSDLRNTK-KNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHD 341
+SWL+N+LH DL K K S+I +C QGELEVV TE G+ G +
Sbjct: 291 LSWLVNSLHLDLTGGKRKKRSVITDCLQGELEVV--------------TEAGT--GKAKE 334
Query: 342 NITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVAR 401
I +PFLMLGLDLP PLFKD +EK IIPQVP+F+IL+KFDG+ V E ++ R
Sbjct: 335 AIKDVIDHVPFLMLGLDLPAAPLFKDALEKVIIPQVPIFDILRKFDGQLVHEDIK--AGR 392
Query: 402 MRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSK 461
R+RVTRLP++M+LH+RRF KN FFVEKNPT+VNFPVKNLEL IP+P +++ SK
Sbjct: 393 RRFRVTRLPRFMVLHVRRFLKNQFFVEKNPTIVNFPVKNLELAGCIPVPKGPDSQPAPSK 452
Query: 462 YDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
YDL+AN+VH+GK G YRV + RK E++W
Sbjct: 453 YDLVANVVHEGKAGAGLYRVHIHRKVEDVW 482
>gi|255072647|ref|XP_002499998.1| predicted protein [Micromonas sp. RCC299]
gi|226515260|gb|ACO61256.1| predicted protein [Micromonas sp. RCC299]
Length = 483
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 235/436 (53%), Positives = 283/436 (64%), Gaps = 70/436 (16%)
Query: 105 CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVY 164
CPYLDTVNR +LDFDFEK CSVSL NVYACLVCGKY+QGRG +HAY H+LEA HHV+
Sbjct: 21 CPYLDTVNRSLLDFDFEKCCSVSLVPHNVYACLVCGKYFQGRGPSTHAYVHALEATHHVF 80
Query: 165 INLRTEKVYCLPDGYEINDPSLEDIRHV-------------------------------- 192
+NL T +VYCLPD YE+ D SL+DIRHV
Sbjct: 81 MNLDTGRVYCLPDMYEVVDASLDDIRHVLNPKFTSPQIAEVDHRRLWSRGLDGTDYLTGA 140
Query: 193 -GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY---------------RHCKSPLVHR 236
GLNN++ TD+VNV +QSLMRV P+R+FFL SPL R
Sbjct: 141 VGLNNLRATDYVNVVLQSLMRVGPVRDFFLAQRELGVSGAGGGGAGGAGPGPAASPLARR 200
Query: 237 FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRN 296
FG+LTRKIW++RNFKGQVSPHEF+QAV+ AS +RF I QS+PVEF+SWLLNTL++DL
Sbjct: 201 FGELTRKIWNSRNFKGQVSPHEFMQAVLAASDRRFLIDKQSDPVEFLSWLLNTLNADLSG 260
Query: 297 TKKN-TSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLML 355
K+ SI+ CFQGELEV T G DD RMPF ML
Sbjct: 261 KKRGGKSIVSRCFQGELEV---------------TNAGLAYQDD------PPVRMPFFML 299
Query: 356 GLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMIL 415
LDLP PLF+D MEKN IPQVPLF IL+KFDGET EV+RP R RY++ RLP+Y+I+
Sbjct: 300 SLDLPAAPLFQDAMEKNTIPQVPLFQILRKFDGETEHEVLRPEPRRKRYKLARLPRYLIV 359
Query: 416 HMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPE 475
H +RFTKNNFFVEKNPT+V FPVKNL+L D++P+P + + KY+L+ANI H+GKPE
Sbjct: 360 HHKRFTKNNFFVEKNPTIVTFPVKNLQLSDHVPVPKLPDGRDVPCKYNLVANITHEGKPE 419
Query: 476 GGFYRVFVQRKSEELW 491
G YR V K++ W
Sbjct: 420 SGAYRAAVWHKADGNW 435
>gi|194706300|gb|ACF87234.1| unknown [Zea mays]
Length = 316
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 235/287 (81%), Positives = 254/287 (88%), Gaps = 7/287 (2%)
Query: 211 MRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKR 270
MRVTPLRNFFLIPENY+H KSPLVHRFG+LTRKIWHARNFKGQVSPHEFLQAVMKAS K+
Sbjct: 1 MRVTPLRNFFLIPENYQHSKSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASDKK 60
Query: 271 FRIGVQSNPVEFMSWLLNTLHSDLRNT-KKNTSIIYECFQGELEVVKEIPKNTI-----S 324
F+IGVQS+PVEFM+WLLNTLH+ L+++ KKN SII++CFQGELEVVKE+ + I
Sbjct: 61 FQIGVQSDPVEFMTWLLNTLHAKLKSSKKKNRSIIHDCFQGELEVVKEVHRKHIMEKRED 120
Query: 325 GNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILK 384
G + N E GS G D I TETS++PFLMLGLDLPPPPLFKD MEKNIIPQVPLFNILK
Sbjct: 121 GGELNGEAGSVVGTA-DGIVTETSKVPFLMLGLDLPPPPLFKDAMEKNIIPQVPLFNILK 179
Query: 385 KFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELK 444
KFDGETVTEVVRP +ARMRYRVTRLPKY+ILHMRRFTKNNFFVEKNPTLVNFPVKNLELK
Sbjct: 180 KFDGETVTEVVRPSIARMRYRVTRLPKYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELK 239
Query: 445 DYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
DYIPLP PKEN KLRSKYDLIANIVHDGKP G YRVFVQRKSEE W
Sbjct: 240 DYIPLPKPKENHKLRSKYDLIANIVHDGKPGEGCYRVFVQRKSEEAW 286
>gi|303272677|ref|XP_003055700.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463674|gb|EEH60952.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 501
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 240/444 (54%), Positives = 293/444 (65%), Gaps = 65/444 (14%)
Query: 87 ANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGR 146
A+ +R R RDCPYLDTVNR +LDFDFEK CSVSLS NVYACLVCGKY+ GR
Sbjct: 40 ASRLAAERRERANRASRDCPYLDTVNRALLDFDFEKCCSVSLSPNNVYACLVCGKYFAGR 99
Query: 147 GQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV-------------- 192
G +HAYTHSLEA HHV++NL T KVYCLPD YEI D SL+DIRHV
Sbjct: 100 GPNTHAYTHSLEATHHVFMNLHTGKVYCLPDAYEIVDRSLDDIRHVLDPTFTPAQIEETE 159
Query: 193 -------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPL 233
GLNN+K TD+VNV +Q+LMRV P+RNFFL + +S L
Sbjct: 160 TKKMWSRGLDGTDYLTGAIGLNNLKATDYVNVVLQALMRVKPVRNFFLSDD-----QSLL 214
Query: 234 VHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSD 293
V RFG+LTRKIW++RNFKGQVSPHEF+QAV+ +S++RF + QS+PV+FM+WLLNTLH D
Sbjct: 215 VQRFGELTRKIWNSRNFKGQVSPHEFMQAVLASSRRRFLVDKQSDPVDFMTWLLNTLHRD 274
Query: 294 LRN-TKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPF 352
L K +S+I CFQGELEV T G G T E+++MPF
Sbjct: 275 LSGKMKGGSSVINHCFQGELEV---------------TSVGRPGE------TGESAKMPF 313
Query: 353 LMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKY 412
L LDLPPPPLF+D ME N IPQVPL IL+KFDGET EV+RP Y+++RLP+Y
Sbjct: 314 YTLALDLPPPPLFQDAMENNFIPQVPLSQILRKFDGETPHEVLRPTPGVKTYKISRLPRY 373
Query: 413 MILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPT-----PKENEKLRSKYDLIAN 467
+I+H +RFTKNNFFVEKNPT+V FPVK+L L D++P+PT P + + S YDL+AN
Sbjct: 374 LIVHYKRFTKNNFFVEKNPTIVTFPVKSLRLGDHVPVPTRPNAIPGGGQPVDSTYDLVAN 433
Query: 468 IVHDGKPEGGFYRVFVQRKSEELW 491
+ HDGKP G YR V ++ W
Sbjct: 434 VCHDGKPAEGSYRAMVHHVADGNW 457
>gi|330842890|ref|XP_003293401.1| hypothetical protein DICPUDRAFT_41968 [Dictyostelium purpureum]
gi|325076271|gb|EGC30071.1| hypothetical protein DICPUDRAFT_41968 [Dictyostelium purpureum]
Length = 472
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/457 (47%), Positives = 291/457 (63%), Gaps = 52/457 (11%)
Query: 71 TGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSN 130
T E+DD+D D L + + V+ R+DCPYLDTV+R VLDFDFEK CS+S N
Sbjct: 2 TNENDDDDFDLATYKL--------KKKHVKARKDCPYLDTVDRSVLDFDFEKICSISFHN 53
Query: 131 LNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIR 190
NVYACLVCGKY+QG+ Q SHA H L+ GHHV+INL+T+++YCLPD YE+ D SL+DI+
Sbjct: 54 HNVYACLVCGKYFQGKSQDSHANYHCLQTGHHVFINLKTQQIYCLPDDYEVIDSSLDDIK 113
Query: 191 H---------------------------------VGLNNIKETDFVNVTIQSLMRVTPLR 217
+ +GLNN+K T +VNV IQSL R+ +R
Sbjct: 114 YLLNPTFTTEQIKELDKNTKNSKALDGSFYLPGIIGLNNLKNTSYVNVIIQSLARIPTIR 173
Query: 218 NFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQS 277
++ L N +CKS LV F +L RKIW+ RNFK QVSPHE LQA+ AS+K+F I +
Sbjct: 174 DYLLDFNNISNCKSILVQSFSELLRKIWNPRNFKPQVSPHELLQAIQNASQKKFNIRETA 233
Query: 278 NPVEFMSWLLNTLHSDLRNTKK-NTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDG 336
+P+EF+ W LNTLH DL TK+ N+SIIY+ G++EV E P +D + + DG
Sbjct: 234 DPLEFLQWFLNTLHRDLGGTKQPNSSIIYKALSGQIEVTTEKPIKNDDDSDDSDSEMKDG 293
Query: 337 GDDHDNI--TTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEV 394
+ +T T R PFL L LDLPP +FKD EK+IIPQVPLFN+L K+DG T T +
Sbjct: 294 NKSKKPVQYSTSTMRNPFLFLTLDLPPKQIFKDSQEKSIIPQVPLFNLLSKYDGNTTTTM 353
Query: 395 VRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKE 454
P+ +Y++ +LPKY+IL ++RF+KNNFFVEK PT+VNFP+KNL+L Y+P K
Sbjct: 354 --PNGDLKKYKIIQLPKYLILCIKRFSKNNFFVEKEPTIVNFPIKNLDLSSYLPPDASK- 410
Query: 455 NEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+KY+L+A I H+G+P G Y V++ K ++ W
Sbjct: 411 -----AKYNLLATIKHEGEPNSGNYSVYILNKGKDKW 442
>gi|66828951|ref|XP_647829.1| SAP DNA-binding domain-containing protein [Dictyostelium discoideum
AX4]
gi|60470085|gb|EAL68066.1| SAP DNA-binding domain-containing protein [Dictyostelium discoideum
AX4]
Length = 718
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/433 (48%), Positives = 280/433 (64%), Gaps = 44/433 (10%)
Query: 95 RSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYT 154
+ + ++ R+DCPYLDTVNR VLDFDFEK CSVS N NVYACLVCGKY+QG+ Q SHA
Sbjct: 264 KKKQIKTRKDCPYLDTVNRDVLDFDFEKVCSVSFHNHNVYACLVCGKYFQGKSQDSHANY 323
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH----------------------- 191
H L+ HHV+INL+T+++YCLPD YE+ D SL+DI++
Sbjct: 324 HCLQMDHHVFINLKTQQIYCLPDDYEVIDSSLDDIKYLLNPTFTNDQIKELDRNSKLSRA 383
Query: 192 ----------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLT 241
VGLNNIK T +VNV IQSL R+ +RNF L +N + KSPLV +L
Sbjct: 384 LDDSKYLPGIVGLNNIKNTAYVNVIIQSLARIPTIRNFLLNVDNIKTNKSPLVLTLSELL 443
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-N 300
RKIW+ +NFK QVSPHE LQA+ +S+KRF I S+P++F+ W LNTLH DL TK+ N
Sbjct: 444 RKIWNPKNFKAQVSPHELLQAIQNSSQKRFNIRESSDPLDFLPWFLNTLHKDLGGTKQPN 503
Query: 301 TSIIYECFQGELEVV--KEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLD 358
+SIIY+ F GE+++ K IPK+ + + + TS+ PFL L LD
Sbjct: 504 SSIIYKAFSGEIQITTDKPIPKSVDDDSSDYDNDDGENKKLKTKYSNSTSKQPFLFLTLD 563
Query: 359 LPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMR 418
LPP P+FKD +K+IIPQ+PLFN+L K+DG TE + P+ +Y++ LP Y+IL ++
Sbjct: 564 LPPKPIFKDDQDKSIIPQIPLFNLLSKYDG--TTETILPNGEIKKYKILSLPNYLILCVK 621
Query: 419 RFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGF 478
RF+KNNFF+EK PT+VNFP+KNL+L DY+P +PK SK++L+A I H+G P G
Sbjct: 622 RFSKNNFFIEKEPTIVNFPIKNLDLNDYLPPGSPK------SKFNLLATIKHEGDPNSGN 675
Query: 479 YRVFVQRKSEELW 491
+ V++ K + W
Sbjct: 676 FSVYINHKGNDKW 688
>gi|189235059|ref|XP_974413.2| PREDICTED: similar to ubiquitin specific protease 39 and snrnp
assembly factor [Tribolium castaneum]
gi|270003988|gb|EFA00436.1| hypothetical protein TcasGA2_TC003290 [Tribolium castaneum]
Length = 501
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/437 (48%), Positives = 283/437 (64%), Gaps = 55/437 (12%)
Query: 100 EVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEA 159
+ R CPYLDT+NRQ LDFDFEK CSVSL+ +NVYACLVCGKY+QGRG +HAYTHS+
Sbjct: 43 QTHRLCPYLDTINRQYLDFDFEKLCSVSLTRINVYACLVCGKYFQGRGTNTHAYTHSVAE 102
Query: 160 GHHVYINLRTEKVYCLPDGYEINDPSLEDIRH---------------------------- 191
GHHV++NL T K YCLPD YEI D SL+DI++
Sbjct: 103 GHHVFLNLHTLKFYCLPDNYEIIDSSLDDIKYLLNPTFTEQHISTLDVSTKMSRAIDGLL 162
Query: 192 -----VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGD 239
VGLNNIK D+ NV +Q+L RV PLRN+FL ENY K P LV R+G+
Sbjct: 163 YMPGIVGLNNIKANDYCNVVLQALSRVVPLRNYFLREENYSKIKRPPGDSSYLLVQRYGE 222
Query: 240 LTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR-NTK 298
L RK+W+ RNFK VSPHE LQAV+ SKKRF+I Q +P++F+SW LN LH L N K
Sbjct: 223 LMRKLWNPRNFKAHVSPHEMLQAVVLWSKKRFQITAQGDPIDFLSWFLNALHRALNGNKK 282
Query: 299 KNTSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGL 357
KN+SIIY+ F G +++ ++IP + D ++ ++ I TE+ PFL L
Sbjct: 283 KNSSIIYQSFLGNMKIYTRKIPPTEL---DDRQKRMLLSTPEYQEIITES---PFLYLTC 336
Query: 358 DLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE--VVRPHVARMRYRVTRLPKYMIL 415
DLPPPPLF D +NIIPQV L+ +L KF+G+T E + + + ++ +TRLP Y+IL
Sbjct: 337 DLPPPPLFIDEFRENIIPQVNLYQLLTKFNGQTEKEYKTYKENFLK-KFEITRLPPYLIL 395
Query: 416 HMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLR-SKYDLIANIVHDGKP 474
+++RFTKN F+VEKNPT+VNFPV+N++ +++ TP+ K + + YDL+ANIVHDG+P
Sbjct: 396 YIKRFTKNTFYVEKNPTIVNFPVRNVDFGEFL---TPEVKAKHKHTVYDLVANIVHDGEP 452
Query: 475 EGGFYRVFVQRKSEELW 491
G YRV + +KS W
Sbjct: 453 GKGTYRVHILQKSTGKW 469
>gi|294463557|gb|ADE77307.1| unknown [Picea sitchensis]
Length = 336
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/308 (67%), Positives = 229/308 (74%), Gaps = 57/308 (18%)
Query: 36 ENPLLPLANTYDDDDEEEEYGGRGDSGAKVGQNGRTGEDDDEDKDEDEDDLANGYGQGQR 95
+N LLPLA S + +D++D+DE NG Q +R
Sbjct: 43 DNGLLPLA-----------------SYGDDDDDEDGYGEDEDDRDE------NGAVQERR 79
Query: 96 SRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTH 155
RLVE+R+DCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRG+ SHAYTH
Sbjct: 80 QRLVEIRKDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGRNSHAYTH 139
Query: 156 SLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH------------------------ 191
SLEAGHHVYINLRTEK YCLPDGYE+NDPSL+DIRH
Sbjct: 140 SLEAGHHVYINLRTEKAYCLPDGYEVNDPSLDDIRHVLNPRFSREQVEQLDTIKQWSRAL 199
Query: 192 ---------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTR 242
VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY++CKSPLVHRFG+LTR
Sbjct: 200 DGSDYLPGMVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYQNCKSPLVHRFGELTR 259
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NT 301
KIWH+RNFKGQVSPHEFLQAVM ASKKRFRIG QS+PVEFMSWLLNTLH+DL TKK N+
Sbjct: 260 KIWHSRNFKGQVSPHEFLQAVMVASKKRFRIGAQSDPVEFMSWLLNTLHADLGGTKKSNS 319
Query: 302 SIIYECFQ 309
SIIY+CFQ
Sbjct: 320 SIIYKCFQ 327
>gi|291234279|ref|XP_002737076.1| PREDICTED: ubiquitin specific peptidase 39-like [Saccoglossus
kowalevskii]
Length = 455
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/431 (48%), Positives = 275/431 (63%), Gaps = 49/431 (11%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R+CPYLDT+NR VLDFDFEK CSV LS++NVYACL+CGKY+QGRG KSHAYTHS+E HH
Sbjct: 22 RNCPYLDTINRNVLDFDFEKLCSVCLSHINVYACLICGKYFQGRGLKSHAYTHSVEVDHH 81
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
VY+NL T K YCLPD YE+ D SL+DI++V
Sbjct: 82 VYLNLHTLKFYCLPDNYEVIDSSLDDIKYVLKPTFTRLQIYHMDKTSKLSRAYDGSTYLP 141
Query: 193 ---GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTR 242
GLNNIK+ D+ NV + + V PLRN+FL ENY H K P L RFG+L R
Sbjct: 142 GVVGLNNIKKNDYCNVILHAFAHVPPLRNYFLREENYAHIKRPPGDIMILLSQRFGELMR 201
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRN-TKKNT 301
K+W+ RNFK VSPHE LQAV+ SKK+++I Q +PVEFMSW LN LH L KKN+
Sbjct: 202 KMWNPRNFKAHVSPHEMLQAVVLCSKKKYQITSQGDPVEFMSWFLNALHIALNGGKKKNS 261
Query: 302 SIIYECFQGELEVV-KEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLP 360
SI+Y+ FQG + + +++P + ++ S+ D TS PFL L LD+P
Sbjct: 262 SIVYKTFQGSMRIYSRKLPPADVEDLEKQALIQSEEYQD------TTSDSPFLYLMLDIP 315
Query: 361 PPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMR-YRVTRLPKYMILHMRR 419
P PLFKD +E+NIIPQVPL +L KFDG + E + M+ + +T LP+Y++L ++R
Sbjct: 316 PAPLFKDELEQNIIPQVPLHTLLSKFDGISEKEYKTYKDSTMKKFELTHLPRYLLLCIKR 375
Query: 420 FTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFY 479
FTKN FFVEKNPT+VNFPVKN++ ++++ + + + YDL+ANIVH+G+P G +
Sbjct: 376 FTKNIFFVEKNPTIVNFPVKNVDFREFLCKDPEIQKKHKYTTYDLMANIVHEGEPSKGTF 435
Query: 480 RVFVQRKSEEL 490
R V K + L
Sbjct: 436 RAHVLHKVKHL 446
>gi|121583691|ref|NP_001073539.1| U4/U6.U5 tri-snRNP-associated protein 2 [Danio rerio]
gi|118763915|gb|AAI28869.1| Ubiquitin specific peptidase 39 [Danio rerio]
Length = 497
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/446 (48%), Positives = 277/446 (62%), Gaps = 58/446 (13%)
Query: 89 GYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQ 148
GY + +RSR CPYLDT+NR VLDFDFEK CS+SLS++NVYACL+CGKY+QGRGQ
Sbjct: 26 GYVEDRRSR------HCPYLDTINRSVLDFDFEKLCSISLSHINVYACLICGKYFQGRGQ 79
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV---------------- 192
KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI +V
Sbjct: 80 KSHAYIHSVQVAHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQHISGLDKQ 139
Query: 193 -----------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP--- 232
GLNNIK D+ NV +Q+L V PLRN+FL ENYR + P
Sbjct: 140 GKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQALSNVPPLRNYFLEEENYRGIRRPPGD 199
Query: 233 ----LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLN 288
LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK F+I Q + V+F+SW LN
Sbjct: 200 IMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDAVDFLSWFLN 259
Query: 289 TLHSDLRNTKKNTSIIYECFQGELEVV-KEIPKNTISGNDQNTEKGSDGGDDHDNITTET 347
LH L TKK +SII + FQG + + K++P + ++ + + E
Sbjct: 260 ALHGALGGTKKKSSIITKAFQGSMRIFSKKLPHPDLPPEEKEALLLKEEYQE------EM 313
Query: 348 SRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE--VVRPHVARMRYR 405
S FL L LDLP PL+KD E+ IIPQVPLFNIL KF+G T E + + + R++
Sbjct: 314 SESTFLYLTLDLPTAPLYKDEKEQLIIPQVPLFNILGKFNGNTEKEYKTYKENFLK-RFQ 372
Query: 406 VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLI 465
+T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+ N++L++Y L + + + YDL+
Sbjct: 373 LTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREY--LTEEAQVTEKNTTYDLV 430
Query: 466 ANIVHDGKPEGGFYRVFVQRKSEELW 491
AN+VHDGKP G YR+ V W
Sbjct: 431 ANVVHDGKPTEGSYRIHVLHHGTGKW 456
>gi|348528502|ref|XP_003451756.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Oreochromis
niloticus]
Length = 501
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/442 (48%), Positives = 274/442 (61%), Gaps = 54/442 (12%)
Query: 95 RSRLVEVRRD--CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHA 152
R VE RR CPYLDT+NR VLDFDFEK CS+SLS++NVYACL+CGKY+QGRG KSHA
Sbjct: 28 RGHAVEDRRSRHCPYLDTINRSVLDFDFEKLCSISLSHINVYACLICGKYFQGRGLKSHA 87
Query: 153 YTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV-------------------- 192
YTHS++ HHV++NL T K YCLPD YEI D SLEDI +V
Sbjct: 88 YTHSVQFTHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQHIAGLDKQGKLY 147
Query: 193 -------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP------- 232
GLNNIK D+ NV +Q+ V PLRN+FL ENYR + P
Sbjct: 148 RAYDGTTYLPGIVGLNNIKANDYANVVLQAFSNVPPLRNYFLEEENYRGIRRPPGDIMFL 207
Query: 233 LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHS 292
LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK F+I Q + V+FM+W LN LH
Sbjct: 208 LVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKNFQITKQGDAVDFMTWFLNALHG 267
Query: 293 DLRNTKKNTSIIYECFQGELEVV-KEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMP 351
L TKK SII + FQG + + K++P + ++ +D + + S
Sbjct: 268 ALGGTKKKPSIITKAFQGYMRIFSKKLPHPDLPPEEKEALLTTDEYQE------QMSESS 321
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE--VVRPHVARMRYRVTRL 409
FL L LDLP PL+KD E+ IIPQVPLFNIL KF+G T E + + + R+++T+L
Sbjct: 322 FLFLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGSTEKEYKTYKENFLK-RFQLTKL 380
Query: 410 PKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIV 469
P Y+I ++RFTKNNFFVEKNPT+VNFP+ N++L++Y L + + + YDLIAN+V
Sbjct: 381 PPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREY--LTEEAQATEKNTTYDLIANVV 438
Query: 470 HDGKPEGGFYRVFVQRKSEELW 491
HDGKP G YR+ V W
Sbjct: 439 HDGKPTEGAYRIHVLHHGTGKW 460
>gi|432873973|ref|XP_004072409.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Oryzias
latipes]
Length = 488
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/443 (48%), Positives = 277/443 (62%), Gaps = 54/443 (12%)
Query: 94 QRSRLVEVRRD--CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSH 151
+R R+VE RR CPYLDT+NR VLDFDFEK CS+SLS++NVYACL+CGKY+QGRGQKSH
Sbjct: 25 RRGRVVEDRRSRHCPYLDTINRSVLDFDFEKLCSISLSHINVYACLICGKYFQGRGQKSH 84
Query: 152 AYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------- 192
AYTHS++ HHV++NL T K YCLPD YEI D SLEDI +V
Sbjct: 85 AYTHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQHIEGLDKHGKL 144
Query: 193 --------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP------ 232
GLNNIK D+ N +Q+ V PLRN+FL ENYR + P
Sbjct: 145 YRAYDGTTYLPGIVGLNNIKANDYANAVLQAFSNVPPLRNYFLEEENYRDIRRPPGDIMF 204
Query: 233 -LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH 291
LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK F+I Q + V+FM+W LN +H
Sbjct: 205 LLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKNFQITKQGDAVDFMTWFLNAMH 264
Query: 292 SDLRNTKKNTSIIYECFQGELEVV-KEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM 350
L TKK SI+ + FQG + + K++P + ++ ++ + + S
Sbjct: 265 GALGGTKKKPSILTKVFQGSMRIFSKKLPHPDLPPEEKEALLVTEEYQE------QMSES 318
Query: 351 PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE--VVRPHVARMRYRVTR 408
FL L LDLP PL+KD E+ IIPQVPLFNIL KF+G T E + + + R+++T+
Sbjct: 319 TFLFLTLDLPTAPLYKDEKEQLIIPQVPLFNILGKFNGSTEKEYKTYKENFLK-RFQLTK 377
Query: 409 LPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANI 468
LP Y+I ++RFTKNNFFVEKNPT+VNFP+ N++L++Y L + + + YDLIAN+
Sbjct: 378 LPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREY--LTEEAQATEKNTTYDLIANV 435
Query: 469 VHDGKPEGGFYRVFVQRKSEELW 491
VHDGKP G YR+ V W
Sbjct: 436 VHDGKPTEGSYRIHVLHHGTGKW 458
>gi|307184634|gb|EFN70965.1| U4/U6.U5 tri-snRNP-associated protein 2 [Camponotus floridanus]
Length = 504
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 220/468 (47%), Positives = 286/468 (61%), Gaps = 54/468 (11%)
Query: 68 NGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVS 127
+G G+ D D D+ + +++ E R CPYLDT+NRQ LDFDFEK CSVS
Sbjct: 3 SGPQGKRKLVDIGSDSDNETEKNAKHAKTK-SETPRLCPYLDTINRQFLDFDFEKLCSVS 61
Query: 128 LSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLE 187
LS +NVYACLVCGKY+QGRG +HAYTHS+ HHV++NL T K YCLPD YEI D SL+
Sbjct: 62 LSRINVYACLVCGKYFQGRGTNTHAYTHSVAESHHVFLNLHTLKFYCLPDNYEIVDSSLD 121
Query: 188 DIRHV---------------------------------GLNNIKETDFVNVTIQSLMRVT 214
DI++V GLNNIK D+ NV +Q+L VT
Sbjct: 122 DIKYVLYPTFDKAQIAQLDKSDKQSRAIDGSMYSPGIVGLNNIKANDYCNVILQALSHVT 181
Query: 215 PLRNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKAS 267
PLR+FFL NY H + P LV RFG+L RK+W+ RNFK VSPHE LQAV+ S
Sbjct: 182 PLRDFFLRESNYSHVRRPPGDSSYLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLWS 241
Query: 268 KKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NTSIIYECFQGELEV-VKEIPKNTISG 325
KKRF+ Q +PV+F+SW LN LH L TKK ++SIIY+ F G + + ++IP +
Sbjct: 242 KKRFQFTEQGDPVDFLSWFLNALHLALNGTKKRDSSIIYKTFLGHMRIYTRKIPPLELEE 301
Query: 326 NDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKK 385
+ ++ + ++ TE+ PFL L DLPPPPLFKD +NIIPQV L+ +L K
Sbjct: 302 SQRSELLHT---VEYGETVTES---PFLYLTCDLPPPPLFKDQFTENIIPQVNLYTLLNK 355
Query: 386 FDGETVTEVVRPHVARM-RYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELK 444
F+ T E M R+ +T LP Y+IL+++RFTKN FFVEKNPT+VNFPVKN++
Sbjct: 356 FNAITEKEYKTYKENFMKRFEITELPPYLILYIKRFTKNTFFVEKNPTIVNFPVKNVDFG 415
Query: 445 DYIPLPTPKENEK-LRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
D + TP+ K L + YDL+ANIVHDG+P G YRV + ++ W
Sbjct: 416 DIL---TPEIKAKHLYTTYDLVANIVHDGEPGQGTYRVHILHRATGQW 460
>gi|390335093|ref|XP_001185686.2| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2
[Strongylocentrotus purpuratus]
Length = 517
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/429 (50%), Positives = 274/429 (63%), Gaps = 52/429 (12%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR +LDFDFEK CSVSLS+LNVYACLVCGKY+QGRGQKSHAYTHS+ HH
Sbjct: 43 RSCPYLDTINRGLLDFDFEKLCSVSLSHLNVYACLVCGKYFQGRGQKSHAYTHSVYINHH 102
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL T K YCLPD YEI D SLEDI +V
Sbjct: 103 VFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKKQIKLLDKDPKTCRAYDTTMYTA 162
Query: 193 ---GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTR 242
GLNNIKE D+ NV + +L V P+RN+FL ENY K P L RFG+L R
Sbjct: 163 GIVGLNNIKENDYCNVLLHALSGVVPMRNYFLREENYGDIKLPPGNIMSILSQRFGELMR 222
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NT 301
K+W+ RNFK VSPHE LQA++ SKKRF+I Q +PV+ +SW +N LHS L TKK N+
Sbjct: 223 KMWNQRNFKAHVSPHEMLQAIVLCSKKRFQITEQGDPVDVLSWFINALHSSLAGTKKHNS 282
Query: 302 SIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPP 361
SI+Y+ FQG +++ K + + + EK + T + PFL L LD+PP
Sbjct: 283 SIVYKTFQGRMKI---FTKKVLPADVSDEEKAKLLKTEEYKETEQDQ--PFLFLSLDIPP 337
Query: 362 PPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARM-RYRVTRLPKYMILHMRRF 420
PLFKD +E+NIIPQVPL ++L KFDG+T E + + RY++T+LP Y+IL M+RF
Sbjct: 338 APLFKDELEQNIIPQVPLSSLLAKFDGQTEKEYKTYKESFVKRYQLTQLPPYLILCMKRF 397
Query: 421 TKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLR-SKYDLIANIVHDGKP---EG 476
TKN FFVEKNPT+VNFPVKN++L + + L P+ + + YDL+ANIVH G+P +G
Sbjct: 398 TKNTFFVEKNPTIVNFPVKNIDLAEML-LDDPEVLAAHKYTTYDLVANIVHQGQPGRGKG 456
Query: 477 GFYRVFVQR 485
F + R
Sbjct: 457 AFKAHVIHR 465
>gi|410923080|ref|XP_003975010.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Takifugu
rubripes]
Length = 500
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/443 (47%), Positives = 277/443 (62%), Gaps = 54/443 (12%)
Query: 94 QRSRLVEVRRD--CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSH 151
+R R+VE +R CPYLDT+NR VLDFDFEK CS+SLS++NVYACL+CGKY+QGRG KSH
Sbjct: 27 RRGRVVEDKRSRHCPYLDTINRSVLDFDFEKLCSISLSHINVYACLICGKYFQGRGLKSH 86
Query: 152 AYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------- 192
AYTHS++ HHV++NL T K YCLPD YEI D SLEDI +V
Sbjct: 87 AYTHSVQFTHHVFLNLNTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQHIAGLDKQGKL 146
Query: 193 --------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP------ 232
GLNNIK D+ NV +Q+ V PLRNFFL ENY+ + P
Sbjct: 147 YRAYDGTTYLPGIVGLNNIKANDYANVVLQAFCNVPPLRNFFLEEENYKGIRRPPGDIMF 206
Query: 233 -LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH 291
LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK F+I Q + V+FM+W LN LH
Sbjct: 207 LLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKNFQITKQGDAVDFMTWFLNALH 266
Query: 292 SDLRNTKKNTSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM 350
L TKK SI+ + FQG + + K++P + ++ ++ + + S
Sbjct: 267 GALGGTKKKPSILTKVFQGSMRIFTKKLPHPDLMPEEKEALLVTEEYQE------QMSES 320
Query: 351 PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE--VVRPHVARMRYRVTR 408
FL L LDLP PL+KD E+ IIPQVPLFNIL KF+G T E + + + R+++T+
Sbjct: 321 TFLFLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGNTEKEYKTYKENFLK-RFQLTK 379
Query: 409 LPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANI 468
LP Y++ ++RFTKNNFFVEKNPT+VNFP+ N++L++Y L + + + YDL+ANI
Sbjct: 380 LPPYLVFCIKRFTKNNFFVEKNPTIVNFPITNVDLREY--LTEEAQVSEKNTTYDLVANI 437
Query: 469 VHDGKPEGGFYRVFVQRKSEELW 491
VHDGKP G YR+ V W
Sbjct: 438 VHDGKPTEGAYRIHVLHHGTGKW 460
>gi|340370374|ref|XP_003383721.1| PREDICTED: u4/U6.U5 tri-snRNP-associated protein 2-like [Amphimedon
queenslandica]
Length = 469
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/439 (47%), Positives = 283/439 (64%), Gaps = 54/439 (12%)
Query: 101 VRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAG 160
+ R+CPYLDT+NR +LDFDFEK C+VSLSN NVYACLVCGKY+QGRGQ SHAY HS++
Sbjct: 6 LSRNCPYLDTINRSILDFDFEKLCTVSLSNNNVYACLVCGKYFQGRGQHSHAYIHSVQHY 65
Query: 161 HHVYINLRTEKVYCLPDGYEINDPSLEDIRHV---------------------------- 192
H+V++NL+T + YCLPD YEI DPSLEDI+H+
Sbjct: 66 HYVFLNLKTLQFYCLPDNYEIIDPSLEDIKHICRPTFTSQEIESLDKSAKWMKALDETKY 125
Query: 193 -----GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDL 240
GLNNIK D++NV + +L +TP R++FL +NY P LVHR G+L
Sbjct: 126 LPGILGLNNIKANDYMNVILHTLAHITPFRDYFLNEDNYLSITPPPGDQTFTLVHRLGEL 185
Query: 241 TRKIWHARNF--KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK 298
RK+W+ R F + VSPHE LQAV SKKRF+I Q +PVEFMSWLLNTLH L K
Sbjct: 186 FRKLWNPRYFLFRAHVSPHEMLQAVSSVSKKRFKIVEQGDPVEFMSWLLNTLHFALSAGK 245
Query: 299 KN--TSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLML 355
+ +SI+Y+ FQGE+++ +++P T +N ++ D + E + PFL L
Sbjct: 246 RKNKSSIVYDTFQGEMKIYTRKLPPQT-----ENEDEMMDYLKMEEYKQKEET-TPFLYL 299
Query: 356 GLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMR-YRVTRLPKYMI 414
LDLP PPLF+D +EKNIIPQ+PLF++LKKFDG T E + ++ + +T+LP Y+I
Sbjct: 300 ALDLPAPPLFQDELEKNIIPQIPLFDLLKKFDGTTEKEYKTHRESYVKKFELTKLPPYLI 359
Query: 415 LHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGK- 473
L ++RFTKNNFFVEKNPT+VNFP+K++++ +++ ++ + YDL+AN+ HDG+
Sbjct: 360 LCIKRFTKNNFFVEKNPTIVNFPIKDIDMSEFLSSDPAVQDSHPHTVYDLVANVCHDGQA 419
Query: 474 -PEGGFYRVFVQRKSEELW 491
P G YRV ++ K W
Sbjct: 420 GPGKGTYRVHLRHKGANQW 438
>gi|350415794|ref|XP_003490754.1| PREDICTED: LOW QUALITY PROTEIN: U4/U6.U5 tri-snRNP-associated
protein 2-like [Bombus impatiens]
Length = 508
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/448 (47%), Positives = 278/448 (62%), Gaps = 55/448 (12%)
Query: 91 GQGQRSRLV----EVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGR 146
G ++++++ E R CPYLDT+NRQ LDFDFEK CSVSLS +NVYACLVCGKY+QGR
Sbjct: 24 GIAKKAKIIKTNSEAPRLCPYLDTINRQFLDFDFEKLCSVSLSKINVYACLVCGKYFQGR 83
Query: 147 GQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV-------------- 192
G +HAYTHS+ HHV++NL T K YCLPD YEI D SL+DI++V
Sbjct: 84 GTNTHAYTHSVAESHHVFLNLHTLKFYCLPDNYEIIDSSLDDIKYVLNPTFDKAQIAQLD 143
Query: 193 -------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP- 232
G+NNIK D+ NV +Q+L VTPLR+FFL NY H K P
Sbjct: 144 KSDKLSRAIDGSLYSPGIVGMNNIKANDYCNVILQALSHVTPLRDFFLRESNYSHVKRPP 203
Query: 233 ------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWL 286
LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKKRF+ Q +P++F+SW
Sbjct: 204 GDSSYLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLWSKKRFQFTEQGDPIDFLSWF 263
Query: 287 LNTLHSDLRNTKK-NTSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNIT 344
LN LH L TKK ++SI+Y+ F G + + ++IP + D++ ++
Sbjct: 264 LNALHLALNGTKKRDSSIVYKTFLGHMRIYTRKIPPLEL---DESQRSELLHTVEYGETV 320
Query: 345 TETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARM-R 403
TE+ PFL L DLPPPPLFKD +NIIPQV L+ +L KF+ T E M R
Sbjct: 321 TES---PFLYLTCDLPPPPLFKDQFTENIIPQVNLYTLLNKFNAVTEKEYKTYKENFMKR 377
Query: 404 YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYD 463
+ +T LP Y+IL+++RFTKN FFVEKNPT+VNFPVKN++ D I P K+ + YD
Sbjct: 378 FEITELPPYLILYIKRFTKNTFFVEKNPTIVNFPVKNVDFGD-ILTPEVKQRHPF-TTYD 435
Query: 464 LIANIVHDGKPEGGFYRVFVQRKSEELW 491
L+ANIVHDG+P G YRV + ++ W
Sbjct: 436 LVANIVHDGEPGQGTYRVHILHRATGQW 463
>gi|328703901|ref|XP_001946816.2| PREDICTED: u4/U6.U5 tri-snRNP-associated protein 2-like
[Acyrthosiphon pisum]
Length = 461
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/435 (48%), Positives = 275/435 (63%), Gaps = 51/435 (11%)
Query: 100 EVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEA 159
+V R CPYLDT+NRQVLDFDFEK CSVSLS +NVYACLVCGKY+QGRG +HAYTHS+
Sbjct: 3 KVHRLCPYLDTINRQVLDFDFEKLCSVSLSRINVYACLVCGKYFQGRGTNTHAYTHSVAE 62
Query: 160 GHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV--------------------------- 192
HHV++NL+T K YCLPD YEI D SL+DI++V
Sbjct: 63 SHHVFLNLQTLKFYCLPDNYEIVDSSLDDIKYVLNPTFTPKHVGQLDTCDKRSRAIDGTL 122
Query: 193 ------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGD 239
GLNNIK D+ NV +Q+L VTPLR++FL NY K P LV RFG+
Sbjct: 123 YLPGIVGLNNIKANDYCNVILQALSNVTPLRDYFLDERNYAKVKRPPGDSVFLLVQRFGE 182
Query: 240 LTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK- 298
L RK+W+ RNFK VSPHE LQAV+ S K+F+ Q +P++F+SW LN+LH L K
Sbjct: 183 LMRKLWNPRNFKAHVSPHEMLQAVVLWSGKKFQFTEQGDPIDFLSWFLNSLHRALNGKKS 242
Query: 299 KNTSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGL 357
+++SI+Y+ F G + V ++IP + + + +D +H S PFL L
Sbjct: 243 RHSSIVYKTFMGSMRVKTRKIPPVELDEKQRYSLLCTDEYAEH------VSESPFLYLTC 296
Query: 358 DLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARM-RYRVTRLPKYMILH 416
DLPPPPLFKD + +NIIPQV L+++L KF+ E+ E M R+ +T+LP Y+IL+
Sbjct: 297 DLPPPPLFKDEVMENIIPQVSLYSLLTKFNNESEKEYKTYKENFMKRFEITQLPPYLILY 356
Query: 417 MRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG 476
++RFTKN FFVEKNPT+VNFPVKN++ D I P K K + YDLIANIVHDG+P
Sbjct: 357 IKRFTKNTFFVEKNPTIVNFPVKNVDFGD-ILTPEVKAAHK-NTSYDLIANIVHDGEPNK 414
Query: 477 GFYRVFVQRKSEELW 491
G YRV V ++ W
Sbjct: 415 GTYRVHVLKQGNSKW 429
>gi|307214210|gb|EFN89316.1| U4/U6.U5 tri-snRNP-associated protein 2 [Harpegnathos saltator]
Length = 509
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/454 (48%), Positives = 279/454 (61%), Gaps = 53/454 (11%)
Query: 82 DEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGK 141
D D+ A G+ E R CPYLDT+NRQ LDFDFEK CSVSLS +NVYACLVCGK
Sbjct: 20 DSDNEAEKNGKHVTRTKSEAPRLCPYLDTINRQFLDFDFEKLCSVSLSRINVYACLVCGK 79
Query: 142 YYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV--------- 192
Y+QGRG +HAYTHS+ HHV++NL T K YCLPD YEI D SL+DI++V
Sbjct: 80 YFQGRGSNTHAYTHSVADTHHVFLNLHTLKFYCLPDNYEIVDSSLDDIKYVLNPTFDKTQ 139
Query: 193 ------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRH 228
G+NNIK D+ NV +Q+L VTPLR+FFL NY H
Sbjct: 140 IAQLDKSDKQSRAIDGSMYSPGIVGMNNIKANDYCNVILQALSHVTPLRDFFLRESNYSH 199
Query: 229 CKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVE 281
K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKKRF+ Q +PV+
Sbjct: 200 VKRPPGDSSYLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLWSKKRFQFTEQGDPVD 259
Query: 282 FMSWLLNTLHSDLRNTKK-NTSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDD 339
F+SW LN LH L TKK ++SIIY+ F G + + ++IP + + ++ + +
Sbjct: 260 FLSWFLNALHLALNGTKKRDSSIIYKTFLGHMRIYTRKIPPLELEESQRSELLHT---VE 316
Query: 340 HDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHV 399
+ TE+ PFL L DLPPPPLFKD +NIIPQV L+ +L KF+ T E
Sbjct: 317 YGETVTES---PFLYLTCDLPPPPLFKDQFTENIIPQVNLYTLLNKFNAVTEKEYKTYKE 373
Query: 400 ARM-RYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKL 458
M R+ +T LP Y+IL+++RFTKN FFVEKNPT+VNFPVKN++ D + TP+ K
Sbjct: 374 NFMKRFEITELPPYLILYIKRFTKNTFFVEKNPTIVNFPVKNVDFGDIL---TPEVKAKH 430
Query: 459 -RSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+ YDL+ANIVHDG+P G YRV + ++ W
Sbjct: 431 PYTTYDLVANIVHDGEPGQGTYRVHILHRATGQW 464
>gi|340713360|ref|XP_003395212.1| PREDICTED: u4/U6.U5 tri-snRNP-associated protein 2-like [Bombus
terrestris]
Length = 502
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/435 (48%), Positives = 271/435 (62%), Gaps = 51/435 (11%)
Query: 100 EVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEA 159
E R CPYLDT+NRQ LDFDFEK CSVSLS +NVYACLVCGKY+QGRG +HAYTHS+
Sbjct: 37 EAPRLCPYLDTINRQFLDFDFEKLCSVSLSKINVYACLVCGKYFQGRGTNTHAYTHSVAE 96
Query: 160 GHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV--------------------------- 192
HHV++NL T K YCLPD YEI D SL+DI++V
Sbjct: 97 SHHVFLNLHTLKFYCLPDNYEIIDSSLDDIKYVLNPTFDKAQIAQLDKSDKLSRAIDGSL 156
Query: 193 ------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGD 239
G+NNIK D+ NV +Q+L VTPLR+FFL NY H K P LV RFG+
Sbjct: 157 YSPGIVGMNNIKANDYCNVILQALSHVTPLRDFFLRESNYSHVKRPPGDSSYLLVQRFGE 216
Query: 240 LTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK 299
L RK+W+ RNFK VSPHE LQAV+ SKKRF+ Q +P++F+SW LN LH L TKK
Sbjct: 217 LMRKLWNPRNFKAHVSPHEMLQAVVLWSKKRFQFTEQGDPIDFLSWFLNALHLALNGTKK 276
Query: 300 -NTSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGL 357
++SI+Y+ F G + + ++IP + D++ ++ TE+ PFL L
Sbjct: 277 RDSSIVYKTFLGHMRIYTRKIPPLEL---DESQRSELLHTVEYGETVTES---PFLYLTC 330
Query: 358 DLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARM-RYRVTRLPKYMILH 416
DLPPPPLFKD +NIIPQV L+ +L KF+ T E M R+ +T LP Y+IL+
Sbjct: 331 DLPPPPLFKDQFTENIIPQVNLYTLLNKFNAVTEKEYKTYKENFMKRFEITELPPYLILY 390
Query: 417 MRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG 476
++RFTKN FFVEKNPT+VNFPVKN++ D I P K+ + YDL+ANIVHDG+P
Sbjct: 391 IKRFTKNTFFVEKNPTIVNFPVKNVDFGD-ILTPEVKQRHPF-TTYDLVANIVHDGEPGQ 448
Query: 477 GFYRVFVQRKSEELW 491
G YRV + ++ W
Sbjct: 449 GTYRVHILHRATGQW 463
>gi|332028251|gb|EGI68298.1| U4/U6.U5 tri-snRNP-associated protein 2 [Acromyrmex echinatior]
Length = 507
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/435 (48%), Positives = 272/435 (62%), Gaps = 51/435 (11%)
Query: 100 EVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEA 159
E R CPYLDT+NRQ LDFDFEK CSVSLS +NVYACLVCGKY+QGRG +HAYTHS+
Sbjct: 36 EAPRLCPYLDTINRQFLDFDFEKLCSVSLSRINVYACLVCGKYFQGRGTNTHAYTHSVAE 95
Query: 160 GHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV--------------------------- 192
HHV++NL T K YCLPD YEI D SL+DI++V
Sbjct: 96 SHHVFLNLHTLKFYCLPDNYEIVDSSLDDIKYVLNPTFDKMQIAQLDKSDKQSRAIDGSM 155
Query: 193 ------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGD 239
G+NNIK D+ NV +Q+L VTPLR+FFL NY H + P LV RFG+
Sbjct: 156 YSPGIVGMNNIKANDYCNVILQALSHVTPLRDFFLRESNYAHVRRPPGDSSYLLVQRFGE 215
Query: 240 LTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK 299
L RK+W+ RNFK VSPHE LQAV+ SKKRF+ Q +PV+F+SW LN LH L TKK
Sbjct: 216 LMRKLWNPRNFKAHVSPHEMLQAVVLWSKKRFQFTEQGDPVDFLSWFLNALHLALNGTKK 275
Query: 300 -NTSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGL 357
++SIIY+ F G + + ++IP + + ++ + ++ TE+ PFL L
Sbjct: 276 RDSSIIYKTFLGHMRIYTRKIPPLELEESQRSELLHT---VEYGETVTES---PFLYLTC 329
Query: 358 DLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARM-RYRVTRLPKYMILH 416
DLPPPPLFKD +NIIPQV L+ +L KF+ T E M R+ +T LP Y+IL+
Sbjct: 330 DLPPPPLFKDQFTENIIPQVNLYTLLNKFNAVTEKEYKTYKENFMKRFEITELPPYLILY 389
Query: 417 MRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG 476
++RFTKN FFVEKNPT+VNFPVKN++ D L + + + + YDL+ANIVHDG+P
Sbjct: 390 IKRFTKNTFFVEKNPTIVNFPVKNVDFGDI--LTSEVKAKHPYTTYDLVANIVHDGEPGQ 447
Query: 477 GFYRVFVQRKSEELW 491
G YRV + K+ W
Sbjct: 448 GTYRVHILHKATGQW 462
>gi|322783229|gb|EFZ10815.1| hypothetical protein SINV_09876 [Solenopsis invicta]
Length = 539
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 223/488 (45%), Positives = 294/488 (60%), Gaps = 64/488 (13%)
Query: 48 DDDEEEEYGGRGDSGAKVGQNGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPY 107
DDD+ RG+ + + TG D D + ++D G+ ++R E R CPY
Sbjct: 27 DDDKMAASDRRGNPLKRKFID--TGSDSDNETEKD--------GKHVKTR-AEAPRLCPY 75
Query: 108 LDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINL 167
LDT+NRQ LDFDFEK CSVSLS +NVYACLVCGKY+QGRG + AYTHS+ HHV++NL
Sbjct: 76 LDTINRQFLDFDFEKLCSVSLSRINVYACLVCGKYFQGRGTNTLAYTHSVAESHHVFLNL 135
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV---------------------------------GL 194
T K YCLPD YEI D SL+DI++V G+
Sbjct: 136 HTLKFYCLPDNYEIVDSSLDDIKYVLNPTFDKMQIALLDKSDKQSRAIDGSMYSPGIVGM 195
Query: 195 NNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHA 247
NNIK D+ NV +Q+L VTPLR+FFL NY H + P LV RFG+L RK+W+
Sbjct: 196 NNIKANDYCNVILQALSHVTPLRDFFLRESNYSHVRRPPGDSSYLLVQRFGELMRKLWNP 255
Query: 248 RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NTSIIYE 306
RNFK VSPHE LQAV+ SKKRF+ Q +PV+F+SW LN LH L TKK ++SIIY+
Sbjct: 256 RNFKAHVSPHEMLQAVVLWSKKRFQFTEQGDPVDFLSWFLNALHLALNGTKKRDSSIIYK 315
Query: 307 CFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLF 365
F G + + ++IP + + ++ + ++ TE+ PFL L DLPPPPLF
Sbjct: 316 TFLGHMRIYTRKIPPLELEESQRSELLNT---VEYGETVTES---PFLYLTCDLPPPPLF 369
Query: 366 KDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARM-RYRVTRLPKYMILHMRRFTKNN 424
KD +NIIPQV L+ +L KF+ T E M R+ +T LP Y+IL+++RFT+N
Sbjct: 370 KDQFTENIIPQVNLYTLLNKFNAVTEKEYKTYKENFMKRFEITELPPYLILYIKRFTRNT 429
Query: 425 FFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKL-RSKYDLIANIVHDGKPEGGFYRVFV 483
FFVEKNPT+VNFPVKN++ D + TP+ K + YDL+ANIVHDG+P G YRV +
Sbjct: 430 FFVEKNPTIVNFPVKNVDFGDIL---TPEVKAKHPYTTYDLVANIVHDGEPGQGTYRVHI 486
Query: 484 QRKSEELW 491
++ W
Sbjct: 487 LHRATGQW 494
>gi|156395358|ref|XP_001637078.1| predicted protein [Nematostella vectensis]
gi|156224187|gb|EDO45015.1| predicted protein [Nematostella vectensis]
Length = 470
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/434 (46%), Positives = 279/434 (64%), Gaps = 50/434 (11%)
Query: 103 RDCPYLDTVN--RQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAG 160
R CPY+ R VLDFDFEK CS+SLS++NVYACL+CGKY+QGRG+ S+AYTHS++ G
Sbjct: 12 RHCPYITLFPFPRHVLDFDFEKLCSISLSHINVYACLICGKYFQGRGRHSYAYTHSVQFG 71
Query: 161 HHVYINLRTEKVYCLPDGYEINDPSLEDIRHV---------------------------- 192
HHVY+NL T K YCLPD YE+ D SL+DI++V
Sbjct: 72 HHVYLNLHTLKFYCLPDNYEVIDSSLDDIKYVLNPTFTKKYIKEMDESARLSRAFDGATY 131
Query: 193 -----GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDL 240
GLNNIK D++NV +Q+ +TP+RN+FL ENY K P LV R+G+L
Sbjct: 132 LPGIVGLNNIKANDYLNVVLQAFAFITPIRNYFLREENYNVIKRPPGDIMFQLVQRYGEL 191
Query: 241 TRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK- 299
RK+W+ RNFK VSPHE LQAV+ SKKRF+ Q +P+EF+ W LN LH+ L TKK
Sbjct: 192 LRKLWNPRNFKAHVSPHEMLQAVVLCSKKRFQFTKQGDPIEFLPWFLNALHTALNGTKKM 251
Query: 300 NTSIIYECFQGELEVV-KEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLD 358
++SII++ FQG++ + +++P+ + N++ E+ +++ +E+ PFL+L LD
Sbjct: 252 SSSIIFKSFQGKMRIYSRKVPQTEVQCNEEKAEQMK--LEEYQETVSES---PFLVLALD 306
Query: 359 LPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARM-RYRVTRLPKYMILHM 417
+P PLFKD ++NIIPQVPL ++L KFDG T E + + RY + RLP+Y+IL +
Sbjct: 307 IPASPLFKDEFQQNIIPQVPLSSLLSKFDGTTEKEYKTYKESFIKRYELLRLPQYLILCI 366
Query: 418 RRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGG 477
+RFTKN FFVEKN T+VNFPVK+++L +Y+ ++ + YDL+ANI HDG+PE G
Sbjct: 367 KRFTKNTFFVEKNATVVNFPVKSVDLAEYLSSDPAVQDAHPHTTYDLVANICHDGEPESG 426
Query: 478 FYRVFVQRKSEELW 491
YR+ V + W
Sbjct: 427 TYRLHVLHRGANKW 440
>gi|383862535|ref|XP_003706739.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Megachile
rotundata]
Length = 508
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/437 (47%), Positives = 274/437 (62%), Gaps = 53/437 (12%)
Query: 99 VEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLE 158
++ R CPYLDT+NRQ LDFDFEK CSVSLS +NVYACLVCGKY+QGRG +HAYTHS+
Sbjct: 36 LDAPRLCPYLDTINRQFLDFDFEKLCSVSLSRINVYACLVCGKYFQGRGTNTHAYTHSVA 95
Query: 159 AGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV-------------------------- 192
HHV++NL T K YCLPD YEI D SL+DI++V
Sbjct: 96 ESHHVFLNLHTLKFYCLPDNYEIIDSSLDDIKYVLNPTFDKAQIAQLDKSDKLSRAIDGS 155
Query: 193 -------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFG 238
G+NNIK D+ NV +Q+L VTPLR+FFL NY H K P LV RFG
Sbjct: 156 LYSPGIVGMNNIKANDYCNVILQALSHVTPLRDFFLRESNYSHVKRPPGDSSYLLVQRFG 215
Query: 239 DLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK 298
+L RK+W+ RNFK VSPHE LQAV+ SKKRF+ Q +P++F+SW +N LH L TK
Sbjct: 216 ELMRKLWNPRNFKAHVSPHEMLQAVVLWSKKRFQFTEQGDPIDFLSWFMNALHLALNGTK 275
Query: 299 K-NTSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLG 356
K +++I+Y+ F G + + ++IP + D++ ++ TE+ PFL L
Sbjct: 276 KRDSTIVYKTFLGHMRIYTRKIPPLEL---DESQRSELLHTVEYGETVTES---PFLYLT 329
Query: 357 LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARM-RYRVTRLPKYMIL 415
DLPPPPLFKD +NIIPQV L+ +L KF+ T E M R+ +T LP Y+IL
Sbjct: 330 CDLPPPPLFKDQFTENIIPQVNLYTLLNKFNAVTEKEYKTYKENFMKRFEITELPPYLIL 389
Query: 416 HMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKL-RSKYDLIANIVHDGKP 474
+++RFTKN FFVEKNPT+VNFPVKN++ D + TP+ ++ + YDL+ANIVHDG+P
Sbjct: 390 YIKRFTKNTFFVEKNPTIVNFPVKNVDFGDIL---TPEVKQRHPYTTYDLVANIVHDGEP 446
Query: 475 EGGFYRVFVQRKSEELW 491
G YRV + ++ W
Sbjct: 447 GQGTYRVHILHRATGQW 463
>gi|196011076|ref|XP_002115402.1| hypothetical protein TRIADDRAFT_59295 [Trichoplax adhaerens]
gi|190582173|gb|EDV22247.1| hypothetical protein TRIADDRAFT_59295 [Trichoplax adhaerens]
Length = 527
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/438 (47%), Positives = 273/438 (62%), Gaps = 53/438 (12%)
Query: 100 EVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEA 159
E R+CPYLDT+NR VLDFDFEK CS+SLSN NVYACLVCGKY+QGRG SHAYTHS++
Sbjct: 26 ERSRNCPYLDTINRSVLDFDFEKLCSISLSNQNVYACLVCGKYFQGRGSHSHAYTHSVQC 85
Query: 160 GHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV--------------------------- 192
HHV+INL + K YCLPD YEI D SL+DI++V
Sbjct: 86 FHHVFINLHSLKFYCLPDDYEIIDSSLDDIKYVLDPTFSNEQIEVIDKIAKLSRTLEGKT 145
Query: 193 ------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGD 239
GLNNIK D+ NV +Q+L V PLRN+FL NY++ K P LV RFG+
Sbjct: 146 YLPGMVGLNNIKANDYCNVILQALAHVVPLRNYFLQENNYKNTKRPPGDTSFRLVQRFGE 205
Query: 240 LTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK 299
L RKIW+ NFK +SPHE LQAV+ SKK+F+I Q +P+ F+SW+LN LH L TKK
Sbjct: 206 LIRKIWNPSNFKTHISPHEMLQAVVYCSKKQFQITEQGDPITFLSWMLNHLHMSLNGTKK 265
Query: 300 -NTSIIYECFQGELEVVKE--IPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLG 356
+SIIY+ F G++ + K IP+ T E + D S PFL L
Sbjct: 266 MRSSIIYKTFCGQMRIYKRKVIPEET-------PELQKLELMELDEYKETQSVAPFLYLT 318
Query: 357 LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARM-RYRVTRLPKYMIL 415
LDLPP PL++D + +NIIPQVPL +L KFDG + E M R+ + RLP+Y+IL
Sbjct: 319 LDLPPAPLYQDELNENIIPQVPLSVLLAKFDGTSEREYKTYKETFMKRFELIRLPRYLIL 378
Query: 416 HMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPE 475
+++RFT+NNFFVEKNPT+VNFP+ L++ +Y+ ++ + Y+L+ANI+HDG+P
Sbjct: 379 YVKRFTRNNFFVEKNPTIVNFPIVELDMAEYLSSDPAVQDAHPVTTYNLVANIIHDGQPG 438
Query: 476 G--GFYRVFVQRKSEELW 491
G YRV ++ + + W
Sbjct: 439 AGKGIYRVHLRHRGSKQW 456
>gi|380021530|ref|XP_003694616.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Apis florea]
Length = 508
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/432 (48%), Positives = 271/432 (62%), Gaps = 51/432 (11%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NRQ LDFDFEK CSVSLS +NVYACLVCGKY+QGRG +HAYTHS+ HH
Sbjct: 40 RLCPYLDTINRQFLDFDFEKLCSVSLSRINVYACLVCGKYFQGRGTNTHAYTHSVAESHH 99
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL T K YCLPD YEI D SL+DI++V
Sbjct: 100 VFLNLHTLKFYCLPDNYEIIDSSLDDIKYVLNPTFDKAQIAQLDKSDKLSRAIDGSLYSP 159
Query: 193 ---GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTR 242
G+NNIK D+ NV +Q+L VTPLR+FFL NY H K P LV RFG+L R
Sbjct: 160 GIVGMNNIKANDYCNVILQALSHVTPLRDFFLRESNYSHVKRPPGDSSYLLVQRFGELMR 219
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NT 301
K+W+ RNFK VSPHE LQAV+ SKKRF+ Q +P++F+SW LN LH L TKK ++
Sbjct: 220 KLWNPRNFKAHVSPHEMLQAVVLWSKKRFQFTEQGDPIDFLSWFLNALHLALNGTKKRDS 279
Query: 302 SIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLP 360
SI+Y+ F G + + ++IP + + ++ + ++ TE+ PFL L DLP
Sbjct: 280 SIVYKTFLGHMRIYTRKIPPLELEESQRSELLHT---VEYGETVTES---PFLYLTCDLP 333
Query: 361 PPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARM-RYRVTRLPKYMILHMRR 419
PPPLFKD +NIIPQV L+ +L KF+ T E M R+ +T LP Y+IL+++R
Sbjct: 334 PPPLFKDQFTENIIPQVNLYTLLNKFNAITEKEYKTYKENFMKRFEITELPPYLILYIKR 393
Query: 420 FTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFY 479
FTKN FFVEKNPT+VNFPVKN++ D L + + + + YDL+ANIVHDG+P G Y
Sbjct: 394 FTKNTFFVEKNPTIVNFPVKNVDFGDI--LTSEVKQKHPYTTYDLVANIVHDGEPGQGTY 451
Query: 480 RVFVQRKSEELW 491
RV + ++ W
Sbjct: 452 RVHILHRATGQW 463
>gi|328782425|ref|XP_394503.4| PREDICTED: u4/U6.U5 tri-snRNP-associated protein 2-like [Apis
mellifera]
Length = 508
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/432 (48%), Positives = 271/432 (62%), Gaps = 51/432 (11%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NRQ LDFDFEK CSVSLS +NVYACLVCGKY+QGRG +HAYTHS+ HH
Sbjct: 40 RLCPYLDTINRQFLDFDFEKLCSVSLSRINVYACLVCGKYFQGRGTNTHAYTHSVAESHH 99
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL T K YCLPD YEI D SL+DI++V
Sbjct: 100 VFLNLHTLKFYCLPDNYEIIDSSLDDIKYVLNPTFDKAQIGQLDKSDKLSRAIDGSLYSP 159
Query: 193 ---GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTR 242
G+NNIK D+ NV +Q+L VTPLR+FFL NY H K P LV RFG+L R
Sbjct: 160 GIVGMNNIKANDYCNVILQALSHVTPLRDFFLRESNYSHVKRPPGDSSYLLVQRFGELMR 219
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NT 301
K+W+ RNFK VSPHE LQAV+ SKKRF+ Q +P++F+SW LN LH L TKK ++
Sbjct: 220 KLWNPRNFKAHVSPHEMLQAVVLWSKKRFQFTEQGDPIDFLSWFLNALHLALNGTKKRDS 279
Query: 302 SIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLP 360
SI+Y+ F G + + ++IP + + ++ + ++ TE+ PFL L DLP
Sbjct: 280 SIVYKTFLGHMRIYTRKIPPLELEESQRSELLHT---VEYGETVTES---PFLYLTCDLP 333
Query: 361 PPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARM-RYRVTRLPKYMILHMRR 419
PPPLFKD +NIIPQV L+ +L KF+ T E M R+ +T LP Y+IL+++R
Sbjct: 334 PPPLFKDQFTENIIPQVNLYTLLNKFNAITEKEYKTYKENFMKRFEITELPPYLILYIKR 393
Query: 420 FTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFY 479
FTKN FFVEKNPT+VNFPVKN++ D L + + + + YDL+ANIVHDG+P G Y
Sbjct: 394 FTKNTFFVEKNPTIVNFPVKNVDFGDI--LTSEVKQKHPYTTYDLVANIVHDGEPGQGTY 451
Query: 480 RVFVQRKSEELW 491
RV + ++ W
Sbjct: 452 RVHILHRATGQW 463
>gi|26328829|dbj|BAC28153.1| unnamed protein product [Mus musculus]
Length = 564
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/466 (46%), Positives = 284/466 (60%), Gaps = 57/466 (12%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 73 REREADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 128
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 129 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 188
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 189 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 248
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 249 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 308
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDLRNT-KKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L T KK +I+ + FQG + + K++P + +
Sbjct: 309 TFQITKQGDGVDFLSWFLNALHSALVGTKKKKKTIVNDVFQGSMRIFTKKLPHPDLPAEE 368
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD 387
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+
Sbjct: 369 KEQLLHN---DEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFN 422
Query: 388 GETVTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKD 445
G T E + + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+ N++L++
Sbjct: 423 GITEKEYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLRE 481
Query: 446 YIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+ ++ + YDLIANIVHDGKP G YR+ V W
Sbjct: 482 YLSEEVQAVHKN--TTYDLIANIVHDGKPSEGSYRIHVLHHGTGKW 525
>gi|326427425|gb|EGD72995.1| U4/U6.U5 tri-snRNP-associated protein 2 [Salpingoeca sp. ATCC
50818]
Length = 557
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/425 (48%), Positives = 266/425 (62%), Gaps = 43/425 (10%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR +LDFDFEK CSV++SN NVYACLVCGKYYQGRG +HAYTHSLE GHH
Sbjct: 82 RRCPYLDTINRNMLDFDFEKLCSVTMSNQNVYACLVCGKYYQGRGPGTHAYTHSLEEGHH 141
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V+INL T K YCLPD YE+ D +L+DI+ V
Sbjct: 142 VFINLHTLKFYCLPDNYEVIDSALDDIKFVLYPVYSKDYIAKMDEIGKYSRALDGTRYLP 201
Query: 193 ---GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARN 249
GLNNIK D+VNV +Q+L RV P RNFFL N R + LV GDL RK+ + +
Sbjct: 202 GVVGLNNIKANDYVNVVVQTLNRVAPFRNFFLDTTNTRRIRDRLVQTMGDLIRKVNNPKA 261
Query: 250 FKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQ 309
FKG VSPHEFLQA+ +SKK+FRI QS+P+ +SWLLNTL D + +K ++I + F+
Sbjct: 262 FKGHVSPHEFLQAITTSSKKQFRITEQSDPIRLLSWLLNTL--DAKLSKHGHTVISDTFK 319
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVM 369
G++ V T + + +++ TTE + ++ LGLDLPP PLF D +
Sbjct: 320 GKMLVTSRKLPPTQDMQEVANIRIDPNAEEYKPKTTE---IEYMFLGLDLPPAPLFHDEL 376
Query: 370 EKNIIPQVPLFNILKKFDGETVTEVVRPHVARMR-YRVTRLPKYMILHMRRFTKNNFFVE 428
++N+IPQV LF +L KFDG + E M+ +R+ LPKY+I+H++RFTKN FFVE
Sbjct: 377 QQNVIPQVALFELLNKFDGVSSHEYKTYKDTVMKTFRLKTLPKYLIMHIKRFTKNTFFVE 436
Query: 429 KNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG--KPEGGFYRVFVQRK 486
KNPT+VNFPVKN++L DYI + + ++DL+ANIVHDG P G YR V K
Sbjct: 437 KNPTIVNFPVKNVDLSDYIAEEDKESGDSY--QFDLLANIVHDGLPGPGKGTYRAHVHHK 494
Query: 487 SEELW 491
+ W
Sbjct: 495 GSKKW 499
>gi|357619622|gb|EHJ72117.1| putative ubiquitin specific protease 39 and snrnp assembly factor
[Danaus plexippus]
Length = 485
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/434 (48%), Positives = 272/434 (62%), Gaps = 59/434 (13%)
Query: 105 CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVY 164
CPYLDT+NR VLDFDFEK CSVSL+ +NVYACLVCGKY+QGRG +HAYTHS+ GHHV+
Sbjct: 33 CPYLDTINRHVLDFDFEKLCSVSLTRINVYACLVCGKYFQGRGTNTHAYTHSVAEGHHVF 92
Query: 165 INLRTEKVYCLPDGYEINDPSLEDIRHV-------------------------------- 192
+NL T K YCLPD YE+ D SL DI++V
Sbjct: 93 LNLHTLKFYCLPDNYEVIDSSLNDIKYVLNPIFTPDQIKQLDQNIKMSRAIDGTMYMPGI 152
Query: 193 -GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTRKI 244
GLNNIK D+ NV +Q L +V PLRN+FL ENY K P LV RFG+L RK+
Sbjct: 153 VGLNNIKANDYCNVILQCLAQVRPLRNYFLREENYADVKRPPGDSSFLLVQRFGELLRKL 212
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NTSI 303
W+ R FK VSPHE LQAV+ SKKRF+ QS+P++F+SW LN+LH L TKK N+SI
Sbjct: 213 WNPRAFKAHVSPHEMLQAVVLWSKKRFQFIKQSDPIDFLSWFLNSLHMALNGTKKPNSSI 272
Query: 304 IYECFQGELEV-VKEIP---KNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDL 359
IY+ F G + + +++P + + D N+E +++ + TE+ PFL L DL
Sbjct: 273 IYKSFLGHMRIYTRKLPPPDADEAANVDLNSE-------EYNEMITES---PFLYLTCDL 322
Query: 360 PPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE--VVRPHVARMRYRVTRLPKYMILHM 417
PP PLF D +NIIPQV L+ +L KF+G+ E + + + R+ +T+LP Y+IL++
Sbjct: 323 PPTPLFTDEFRENIIPQVNLYQLLSKFNGQASKEYKTYKENFLK-RFEITQLPPYLILYI 381
Query: 418 RRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGG 477
+RFTKN FFVEKNPT+VNFPVKN++ D I P K ++ Y+L+ NIVHDG PE G
Sbjct: 382 KRFTKNTFFVEKNPTVVNFPVKNVDFGD-ILTPEIKAKHNGKTIYELVGNIVHDGTPEKG 440
Query: 478 FYRVFVQRKSEELW 491
YR V + W
Sbjct: 441 TYRAHVLHTPTQQW 454
>gi|427783021|gb|JAA56962.1| Putative spindle pole body protein [Rhipicephalus pulchellus]
Length = 496
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/462 (45%), Positives = 279/462 (60%), Gaps = 56/462 (12%)
Query: 76 DEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYA 135
D K + +L G + SR + RR+CPYLDT+NR VLDFDFEK CSVSLS +NVYA
Sbjct: 6 DAKKRKLSVELKRGVSTVEHSR--QSRRNCPYLDTINRNVLDFDFEKLCSVSLSRINVYA 63
Query: 136 CLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV--- 192
CLVCGKY+QGRG +HAYTHS++ HHV++NL+T + YCLPD YEI D SL+DI +V
Sbjct: 64 CLVCGKYFQGRGTNTHAYTHSVQVSHHVFLNLQTLRFYCLPDNYEIVDSSLDDITYVLRP 123
Query: 193 ------------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLI 222
GLNNIK D+ NV +Q+L V PLRN+FL
Sbjct: 124 TFTKEDIVRLDTSDRLSRAYDGTTYLPGIVGLNNIKANDYCNVILQALSHVPPLRNYFLR 183
Query: 223 PENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGV 275
ENY K P +V RFG+L RK+W+ RNFK VSPHE LQAV+ SKKRF+I
Sbjct: 184 EENYTTLKRPPGDINFLIVQRFGELIRKLWNPRNFKAHVSPHEMLQAVVLCSKKRFQITQ 243
Query: 276 QSNPVEFMSWLLNTLHSDLRNTKK-NTSIIYECFQGELEVV--KEIPKNTISGNDQNTEK 332
Q +P++F+SW LN+LH L T+K ++SI+Y F+G + V K IP + +
Sbjct: 244 QGDPIDFLSWFLNSLHMALNGTQKISSSIVYRTFRGGMNVYSRKVIPVEMTEAERRAALR 303
Query: 333 GSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVT 392
+ ++D T F+ L DLP PLFKD + +NIIPQVPLF IL KF+G +
Sbjct: 304 TT----EYDEKVESTG---FMYLTADLPAQPLFKDELRENIIPQVPLFTILSKFNGTSEK 356
Query: 393 EVVRPHVARM-RYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPT 451
E + + R+ +T LP Y+IL+++RFTKN FFVEKNPT+VNFP+K+++L + I
Sbjct: 357 EYRTYKDSTLKRFELTSLPPYLILYIKRFTKNTFFVEKNPTIVNFPIKDVDLGELIAANV 416
Query: 452 PKENEKLRSKYDLIANIVHDGKPEG--GFYRVFVQRKSEELW 491
P E YDLIAN+VH+G+P G YR + + W
Sbjct: 417 PDAAEGTYV-YDLIANVVHEGEPGSGKGTYRAHILHRGSGKW 457
>gi|149590362|ref|XP_001518784.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Ornithorhynchus
anatinus]
Length = 529
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 219/481 (45%), Positives = 284/481 (59%), Gaps = 74/481 (15%)
Query: 55 YGGRGDSGAKVGQNGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQ 114
+G RG R G D ED+ RSR CPYLDT+NR
Sbjct: 40 HGSRGGGVCACAARVRHGRLDSEDR---------------RSR------HCPYLDTINRS 78
Query: 115 VLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYC 174
VLDFDFEK CS+SLS++NVYACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YC
Sbjct: 79 VLDFDFEKLCSISLSHINVYACLVCGKYFQGRGLKSHAYIHSVQCSHHVFLNLHTLKFYC 138
Query: 175 LPDGYEINDPSLEDIRHV---------------------------------GLNNIKETD 201
LPD YEI D SLEDI +V GLNNIK D
Sbjct: 139 LPDNYEIIDSSLEDITYVLKPTFTKQQIGNLDKQAKLSRAYDGTTYLPGIVGLNNIKAND 198
Query: 202 FVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQV 254
+ N +Q+L V PLRN+FL ENY++ K P LV RFG+L RK+W+ RNFK V
Sbjct: 199 YANAVLQALSNVPPLRNYFLEEENYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHV 258
Query: 255 SPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELE 313
SPHE LQAV+ SKK F+I Q + V+F+SW LN LHS L KK +I+ + FQG +
Sbjct: 259 SPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMR 318
Query: 314 V-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKN 372
+ K++P + ++ + D++ E++ F+ L LDLP PL+KD E+
Sbjct: 319 IFTKKLPHPDLPAEEK---EHLLHNDEYQETMVEST---FMYLTLDLPTAPLYKDEKEQL 372
Query: 373 IIPQVPLFNILKKFDGETVTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKN 430
IIPQVPLFNIL KF+G T E + + + R+++T+LP Y+I ++RFTKNNFFVEKN
Sbjct: 373 IIPQVPLFNILAKFNGITEKEYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKN 431
Query: 431 PTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEEL 490
PT+VNFP+ N++L++Y+ +E + YDLIANIVHDGKP G YR+ V
Sbjct: 432 PTIVNFPITNVDLREYLSEEVQAVHEN--TTYDLIANIVHDGKPTEGSYRIHVLHHGTGK 489
Query: 491 W 491
W
Sbjct: 490 W 490
>gi|242017490|ref|XP_002429221.1| U4/U6.U5 tri-snRNP-associated protein, putative [Pediculus humanus
corporis]
gi|212514110|gb|EEB16483.1| U4/U6.U5 tri-snRNP-associated protein, putative [Pediculus humanus
corporis]
Length = 482
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/433 (49%), Positives = 272/433 (62%), Gaps = 53/433 (12%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NRQVLDFDFEK CSVSLS +NVYACLVCGKY+QGRG + AYTHS+ GHH
Sbjct: 22 RLCPYLDTINRQVLDFDFEKLCSVSLSRINVYACLVCGKYFQGRGTNTLAYTHSVSDGHH 81
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRH------------------------------- 191
VY+NL T K YCLPD YEI D SL+DI++
Sbjct: 82 VYLNLHTLKFYCLPDNYEIIDSSLDDIKYVLNPTFTSEHINSLDKTDKLSRAIDGTLYLP 141
Query: 192 --VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTR 242
VGLNNIK D+ NV +Q+L V+PLRN+FL NY K P LV RFG+L R
Sbjct: 142 GIVGLNNIKANDYCNVVLQALSHVSPLRNYFLREVNYSKVKRPPGDSSFLLVQRFGELLR 201
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NT 301
K+W+ RNFK VSPHE LQAV+ S+K+F+ Q +P++F+SW +N+LH L TKK ++
Sbjct: 202 KLWNPRNFKAHVSPHEMLQAVVLWSRKKFQFTEQGDPIDFLSWFINSLHIALNGTKKPDS 261
Query: 302 SIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLP 360
SIIY+ F G + + ++IP + + + D++ TE+ PFL L DLP
Sbjct: 262 SIIYKSFLGSMRIYTRKIPPTELEDKQKVALLLT---DEYQEKITES---PFLYLTCDLP 315
Query: 361 PPPLFKDVMEKNIIPQVPLFNILKKFDG--ETVTEVVRPHVARMRYRVTRLPKYMILHMR 418
PPPLFKD +NIIPQV L+ +L KF+G E + + + + R+ +T LP Y+IL+++
Sbjct: 316 PPPLFKDEFMENIIPQVNLYTLLTKFNGTQEKEYKTYKDNFLK-RFEITVLPPYLILYIK 374
Query: 419 RFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGF 478
RFTKN FFVEKNPT+VNFPVKN++ D I K K + YDLIANIVHDG+P G
Sbjct: 375 RFTKNTFFVEKNPTIVNFPVKNVDFAD-IMTDDVKAMHK-YTTYDLIANIVHDGEPNRGT 432
Query: 479 YRVFVQRKSEELW 491
YRV V K W
Sbjct: 433 YRVHVLHKGNGKW 445
>gi|194769538|ref|XP_001966861.1| GF19056 [Drosophila ananassae]
gi|190618382|gb|EDV33906.1| GF19056 [Drosophila ananassae]
Length = 494
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/433 (46%), Positives = 275/433 (63%), Gaps = 51/433 (11%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR +LDFDFEK CS+SL+ +NVYACLVCGKY+QGRG +HAYTHS+ HH
Sbjct: 36 RVCPYLDTINRNLLDFDFEKLCSISLTRINVYACLVCGKYFQGRGTNTHAYTHSVGEAHH 95
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL T + YCLPD YEI D SL+DI++V
Sbjct: 96 VFLNLHTLRFYCLPDNYEIIDSSLDDIKYVLNPTFTRQEIAKLDKVLPKHSRTVDGVLYL 155
Query: 193 ----GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLT 241
GLNNIK D+ NV + +L V PLR++FL +NY H K P LV RFG+L
Sbjct: 156 PGVVGLNNIKANDYCNVVLHALSHVGPLRDYFLREQNYAHIKRPPGDSMFTLVQRFGELM 215
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-N 300
RK+W+ RNFK VSPHE LQAV+ S KRF+I Q +P++F+SW LNTLH ++ K+ N
Sbjct: 216 RKMWNPRNFKAHVSPHEMLQAVVLWSSKRFQITEQGDPIDFLSWFLNTLHRAMKGNKQPN 275
Query: 301 TSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDL 359
+SI+Y+ F GE+++ ++IP + D ++ D++ + +T+ F+ L DL
Sbjct: 276 SSILYKIFLGEMQIYTRKIPPVEL---DDAAKQQLLATDEYKDQVEQTN---FIYLTCDL 329
Query: 360 PPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARM-RYRVTRLPKYMILHMR 418
PPPPLF D +NIIPQV L+ +L KF+G E M R+ +TRLP+++IL+++
Sbjct: 330 PPPPLFTDEFRENIIPQVNLYQLLGKFNGSAEKEYKTYKDNFMKRFEITRLPQFIILYIK 389
Query: 419 RFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGF 478
RFTKN FF+EKNPT+VNFP+KN++ D + + +N K +KY+L+ANIVHDG P+ G
Sbjct: 390 RFTKNTFFLEKNPTIVNFPIKNVDFGDILGMRQRDKNVK-DTKYNLVANIVHDGDPKKGT 448
Query: 479 YRVFVQRKSEELW 491
YR + K+ W
Sbjct: 449 YRAHILHKANGQW 461
>gi|345489070|ref|XP_001603642.2| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Nasonia
vitripennis]
Length = 496
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/457 (47%), Positives = 279/457 (61%), Gaps = 59/457 (12%)
Query: 78 DKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACL 137
D DEDE YG+ QR+ R CPYLDT+NRQ LDFDFEK CSVSLS +NVYACL
Sbjct: 16 DNDEDE-----PYGKEQRAV---APRLCPYLDTINRQFLDFDFEKLCSVSLSRINVYACL 67
Query: 138 VCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV----- 192
VCGKY+QGRG +HAYTHS+ HHV++NL T K YCLPD YEI D SL+DI++V
Sbjct: 68 VCGKYFQGRGNNTHAYTHSVAEYHHVFLNLHTLKFYCLPDNYEIIDSSLDDIKYVLNPTF 127
Query: 193 ----------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE 224
G+NNIK D+ NV +Q+L VTPLR++FL
Sbjct: 128 DKHQIAQLDRNDKLSRAIDGSMYSPGIVGMNNIKANDYCNVILQALSHVTPLRDYFLRES 187
Query: 225 NYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQS 277
NY K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK+F+ Q
Sbjct: 188 NYSKVKRPPGDSSYQLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLWSKKKFQFTEQG 247
Query: 278 NPVEFMSWLLNTLHSDLRNT-KKNTSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSD 335
+PV+F+SW LN LH L T KK++SIIY+ F G + + ++IP + + ++ +
Sbjct: 248 DPVDFLSWFLNALHIALNGTKKKDSSIIYKTFLGHMRIYTRKIPPLELEESQRSELLNT- 306
Query: 336 GGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVV 395
++ TE+ PFL L DLPPPPLFKD +NIIPQV L+ +L KF+ + E
Sbjct: 307 --VEYGETVTES---PFLYLTCDLPPPPLFKDQHAENIIPQVNLYTLLNKFNAVSEKEYK 361
Query: 396 RPHVARM-RYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKE 454
M R+ + LP ++IL+++RFTKN FFVEKNPT+VNFPVKN++ D I P K
Sbjct: 362 TYKENFMKRFEIRELPPFLILYIKRFTKNTFFVEKNPTIVNFPVKNVDFGD-ILTPEVKA 420
Query: 455 NEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+ Y+L+ANIVHDG+P G YRV + K+ W
Sbjct: 421 MHPC-TTYELVANIVHDGEPSHGTYRVHILHKATGQW 456
>gi|395508822|ref|XP_003758708.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Sarcophilus
harrisii]
Length = 607
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 227/519 (43%), Positives = 298/519 (57%), Gaps = 68/519 (13%)
Query: 32 RLGFENPLLPLANTYDDDDEEEEYGGRGDSGAKVGQNGRT------------GEDDDEDK 79
R G P P A D G RG + G+ G G ++
Sbjct: 59 RAGAAAPGQPSAPARRDSARSGPGGRRGCLAVRKGRRGAAPRAXXXXXXXXPGTRVKRER 118
Query: 80 DEDEDDLANGYGQGQRSRL-VEVRRD--CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYAC 136
+ DED G+ + RL E RR CPYLDT+NR VLDFDFEK CS+SLS++N YAC
Sbjct: 119 EADEDSEPEREGRVRYGRLDSEDRRSRHCPYLDTINRSVLDFDFEKLCSISLSHINAYAC 178
Query: 137 LVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV---- 192
LVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI +V
Sbjct: 179 LVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPT 238
Query: 193 -----------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIP 223
GLNNIK D+ N +Q+L V PLRN+FL
Sbjct: 239 FTKQQISNLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNYFLEE 298
Query: 224 ENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQ 276
ENY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK F+I Q
Sbjct: 299 ENYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQ 358
Query: 277 SNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGS 334
+ V+F+SW LN LHS L KK +I+ + FQG + + K++P + ++ +
Sbjct: 359 GDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEKEQLLHN 418
Query: 335 DGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE- 393
D++ E++ F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+G T E
Sbjct: 419 ---DEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGITEKEY 472
Query: 394 -VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTP 452
+ + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+ N++L++Y+
Sbjct: 473 KTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQ 531
Query: 453 KENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
++ + YDLIANIVHDGKP G YR+ V W
Sbjct: 532 AVHKN--TTYDLIANIVHDGKPTEGSYRIHVLHHGTGKW 568
>gi|194220522|ref|XP_001916281.1| PREDICTED: LOW QUALITY PROTEIN: u4/U6.U5 tri-snRNP-associated
protein 2-like [Equus caballus]
Length = 565
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/466 (45%), Positives = 283/466 (60%), Gaps = 57/466 (12%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD 387
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+
Sbjct: 370 KEQLLHN---DEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFN 423
Query: 388 GETVTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKD 445
G T E + + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+ N++L++
Sbjct: 424 GITEKEYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLRE 482
Query: 446 YIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+ ++ + YDLIANIVHDGKP G YR+ V W
Sbjct: 483 YLSEEVQAVHKN--TTYDLIANIVHDGKPSEGSYRIHVLHHGTGKW 526
>gi|148666550|gb|EDK98966.1| ubiquitin specific peptidase 39, isoform CRA_b [Mus musculus]
Length = 604
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/466 (45%), Positives = 283/466 (60%), Gaps = 57/466 (12%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 73 REREADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 128
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 129 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 188
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 189 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 248
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 249 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 308
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 309 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVNDVFQGSMRIFTKKLPHPDLPAEE 368
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD 387
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+
Sbjct: 369 KEQLLHN---DEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFN 422
Query: 388 GETVTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKD 445
G T E + + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+ N++L++
Sbjct: 423 GITEKEYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLRE 481
Query: 446 YIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+ ++ + YDLIANIVHDGKP G YR+ V W
Sbjct: 482 YLSEEVQAVHKN--TTYDLIANIVHDGKPSEGSYRIHVLHHGTGKW 525
>gi|323451594|gb|EGB07471.1| hypothetical protein AURANDRAFT_71813 [Aureococcus anophagefferens]
Length = 1405
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/435 (44%), Positives = 267/435 (61%), Gaps = 49/435 (11%)
Query: 105 CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVY 164
CPYLDT+NR +LDFDFEK CS SL+N NVY+CLVCGK++QGRG+ +HAYTHS + GHH++
Sbjct: 34 CPYLDTINRHLLDFDFEKVCSQSLTNQNVYSCLVCGKFFQGRGRHTHAYTHSTQTGHHMF 93
Query: 165 INLRTEKVYCLPDGYEINDPSLEDIRHV-------------------------------- 192
INL T ++YCLP+ YE+ D SL+D+
Sbjct: 94 INLETCRIYCLPENYEVVDSSLDDVVRCLRPVFGPERIGALDGTTTLARDVHGVAYLPGF 153
Query: 193 -GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
GLNN+K+TD+VNV + +L V PLR+FFL PENY HC +PLVH+FG+L RK+W NFK
Sbjct: 154 CGLNNLKKTDYVNVVVHALAHVAPLRDFFLRPENYAHCPAPLVHKFGELLRKLWSRDNFK 213
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT-KKNTSIIYECFQG 310
+SPHE +Q + ASK RF+IG S+ +F+ W LN LH L T K+ +S+I++ FQG
Sbjct: 214 SVISPHELVQEITVASKLRFQIGETSDAADFLVWFLNELHRSLGGTRKRGSSVIHDAFQG 273
Query: 311 ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVME 370
++ V + ++ D+ + + + +PFL L LD+P PLFKD
Sbjct: 274 DVRVETLSRRTHLTKRDEADVDDTAVSAEAQGWKRDERDLPFLYLTLDVPATPLFKDTQG 333
Query: 371 KNIIPQVPLFNILKKFDGETVTEVVRPHV-ARMRYRVTRLPKYMILHMRRFTKNNFF-VE 428
NI+PQ+PLF++L K++G +++ V+ V +R RY + RLPKY+I H RFTKNNF E
Sbjct: 334 GNIVPQIPLFDVLTKYNGVKLSDSVKSGVQSRKRYVIRRLPKYLIFHFARFTKNNFADSE 393
Query: 429 KNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG------------ 476
KNPT+V+ PVK+LEL+D L E ++KYDL AN HD P G
Sbjct: 394 KNPTIVHIPVKDLELRDQFALEGEAAAEGAKTKYDLCANACHD-LPMGLNKDQRADPLQH 452
Query: 477 GFYRVFVQRKSEELW 491
G YRV V++ + + W
Sbjct: 453 GTYRVHVRQATSDQW 467
>gi|195432803|ref|XP_002064406.1| GK20149 [Drosophila willistoni]
gi|194160491|gb|EDW75392.1| GK20149 [Drosophila willistoni]
Length = 489
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/433 (46%), Positives = 274/433 (63%), Gaps = 51/433 (11%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR +LDFDFEK CS+SL+ +NVYACLVCGKY+QGRG +HAYTHS+ HH
Sbjct: 32 RVCPYLDTINRNLLDFDFEKLCSISLTRINVYACLVCGKYFQGRGNNTHAYTHSVGEAHH 91
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL T + YCLPD YEI D SL+DI++V
Sbjct: 92 VFLNLHTLRFYCLPDNYEIIDSSLDDIKYVLNPTFTKQDIANLDRIRPKHSRTVDGVLYL 151
Query: 193 ----GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLT 241
GLNNIK D+ NV + +L V PLR++FL NY H K P LV RFG+L
Sbjct: 152 PGVVGLNNIKANDYCNVVLHALSHVGPLRDYFLREHNYAHIKRPPGDSMFTLVQRFGELM 211
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-N 300
RK+W+ RNFK VSPHE LQAV+ S KRF+I Q +P++F+SW LNTLH ++ K+ N
Sbjct: 212 RKMWNPRNFKSHVSPHEMLQAVVLWSSKRFQITEQGDPIDFLSWFLNTLHRAMKGNKQPN 271
Query: 301 TSIIYECFQGELEVV-KEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDL 359
+SI+Y+ F GE+++ ++IP + D ++ D++ + +T+ F+ L DL
Sbjct: 272 SSILYKIFLGEMQIYSRKIPPVEL---DDTAKQQLLATDEYQDKVEQTN---FIYLTCDL 325
Query: 360 PPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARM-RYRVTRLPKYMILHMR 418
PPPPLF D +NIIPQV L+ +L KF+G E M R+ +TRLP+++IL+++
Sbjct: 326 PPPPLFTDEFRENIIPQVNLYQLLGKFNGSAEKEYKTYKDNFMKRFEITRLPQFIILYIK 385
Query: 419 RFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGF 478
RFTKN FF+EKNPT+VNFP+KN++ D + + +N K +KY+L+ANIVHDG P+ G
Sbjct: 386 RFTKNTFFLEKNPTIVNFPIKNVDFGDILGMRQRDKNVK-NTKYNLVANIVHDGDPKKGT 444
Query: 479 YRVFVQRKSEELW 491
YR + K+ W
Sbjct: 445 YRAHILHKANGQW 457
>gi|387762647|ref|NP_001248624.1| U4/U6.U5 tri-snRNP-associated protein 2 [Macaca mulatta]
gi|380808926|gb|AFE76338.1| U4/U6.U5 tri-snRNP-associated protein 2 [Macaca mulatta]
gi|383415281|gb|AFH30854.1| U4/U6.U5 tri-snRNP-associated protein 2 [Macaca mulatta]
Length = 565
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/466 (45%), Positives = 283/466 (60%), Gaps = 57/466 (12%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREVDEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD 387
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+
Sbjct: 370 KEQLLHN---DEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFN 423
Query: 388 GETVTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKD 445
G T E + + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+ N++L++
Sbjct: 424 GITEKEYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLRE 482
Query: 446 YIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+ ++ + YDLIANIVHDGKP G YR+ V W
Sbjct: 483 YLSEEVQAVHKN--TTYDLIANIVHDGKPSEGSYRIHVLHHGTGKW 526
>gi|410955233|ref|XP_003984261.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 1 [Felis
catus]
Length = 565
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/466 (45%), Positives = 283/466 (60%), Gaps = 57/466 (12%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD 387
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+
Sbjct: 370 KEQLLHN---DEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFN 423
Query: 388 GETVTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKD 445
G T E + + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+ N++L++
Sbjct: 424 GITEKEYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLRE 482
Query: 446 YIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+ ++ + YDLIANIVHDGKP G YR+ V W
Sbjct: 483 YLSEEVQAVHKN--TTYDLIANIVHDGKPSEGSYRIHVLHHGTGKW 526
>gi|402891448|ref|XP_003908958.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 1 [Papio
anubis]
Length = 565
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/466 (45%), Positives = 283/466 (60%), Gaps = 57/466 (12%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREVDEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD 387
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+
Sbjct: 370 KEQLLHN---DEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFN 423
Query: 388 GETVTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKD 445
G T E + + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+ N++L++
Sbjct: 424 GITEKEYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLRE 482
Query: 446 YIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+ ++ + YDLIANIVHDGKP G YR+ V W
Sbjct: 483 YLSEEVQAVHKN--TTYDLIANIVHDGKPSEGSYRIHVLHHGTGKW 526
>gi|301774987|ref|XP_002922905.1| PREDICTED: u4/U6.U5 tri-snRNP-associated protein 2-like [Ailuropoda
melanoleuca]
Length = 565
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/463 (46%), Positives = 282/463 (60%), Gaps = 58/463 (12%)
Query: 74 DDDEDKD-EDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLN 132
D DED + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS++N
Sbjct: 77 DADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLSHIN 132
Query: 133 VYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV 192
YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI +V
Sbjct: 133 AYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYV 192
Query: 193 ---------------------------------GLNNIKETDFVNVTIQSLMRVTPLRNF 219
GLNNIK D+ N +Q+L V PLRN+
Sbjct: 193 LKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNY 252
Query: 220 FLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFR 272
FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK F+
Sbjct: 253 FLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQ 312
Query: 273 IGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGNDQNT 330
I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + ++
Sbjct: 313 ITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEKEQ 372
Query: 331 EKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGET 390
+ D++ E++ F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+G T
Sbjct: 373 LLQN---DEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGIT 426
Query: 391 VTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIP 448
E + + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+ N++L++Y+
Sbjct: 427 EKEYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLS 485
Query: 449 LPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
++ + YDLIANIVHDGKP G YR+ V W
Sbjct: 486 EEVQAAHKN--TTYDLIANIVHDGKPSEGSYRIHVLHHGTGKW 526
>gi|321473066|gb|EFX84034.1| hypothetical protein DAPPUDRAFT_187802 [Daphnia pulex]
Length = 495
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/468 (46%), Positives = 283/468 (60%), Gaps = 77/468 (16%)
Query: 77 EDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYAC 136
ED D++++ + +SRL CPYLDT+NR VLDFDFEK CSVSL+ +NVYAC
Sbjct: 13 EDFDDEDEPVVKTREPIAKSRL------CPYLDTINRTVLDFDFEKLCSVSLTRINVYAC 66
Query: 137 LVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV---- 192
LVCGKY+QGRG +HAY HS+ GHHV++NL T + YCLPD YEI D SL+DI++V
Sbjct: 67 LVCGKYFQGRGPSTHAYLHSVGEGHHVFLNLHTLRFYCLPDNYEIIDSSLDDIKYVLNPT 126
Query: 193 -----------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIP 223
GLNNIK D+ NV +Q+L V PLR++FL
Sbjct: 127 FKKANIAVLDVIDKVSRSCDGTLYRPGVFGLNNIKANDYCNVVLQALSHVVPLRDYFLRE 186
Query: 224 ENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQ 276
ENY K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK+F+I Q
Sbjct: 187 ENYIGIKRPPGDNNVILVQRFGELIRKLWNPRNFKAHVSPHEMLQAVVLCSKKKFQITSQ 246
Query: 277 SNPVEFMSWLLNTLHSDLRNTKKNT-SIIYECFQGELEV-VKEIPKNTISGNDQNTEKGS 334
+PVEF+SW LN LH L TKK T SIIY+ F G +++ + IP I D TEK
Sbjct: 247 GDPVEFLSWFLNALHLALNGTKKPTSSIIYKSFLGAMKIHSQRIPP--IDATD--TEK-- 300
Query: 335 DGGDDHDNITTETSRM----PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGET 390
D +T E PFL L DLPPPPLFKD +NIIPQV LF +L +F+G
Sbjct: 301 ----DALMLTAEYVETFVDSPFLFLAADLPPPPLFKDEFRENIIPQVSLFALLSQFNGVQ 356
Query: 391 VTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIP 448
E + + + R+ +T+LP+Y+IL+++RFTKN FF+EKNPT++NFP++ ++ D +
Sbjct: 357 QKEYKTYKENFLK-RFELTKLPRYIILNIKRFTKNTFFIEKNPTIINFPIRGVDFGDIL- 414
Query: 449 LPTPKENEKLRSK-----YDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+R+K YDL+ANIVHDG+P G YRV + K+ W
Sbjct: 415 ------GADVRAKHGCTTYDLLANIVHDGEPTKGTYRVHILHKATGKW 456
>gi|426223527|ref|XP_004005926.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 1 [Ovis
aries]
Length = 565
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/466 (45%), Positives = 283/466 (60%), Gaps = 57/466 (12%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD 387
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+
Sbjct: 370 K---EQLLHNDEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFN 423
Query: 388 GETVTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKD 445
G T E + + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+ N++L++
Sbjct: 424 GITEKEYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLRE 482
Query: 446 YIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+ ++ + YDLIANIVHDGKP G YR+ V W
Sbjct: 483 YLSEEVQAVHKN--TTYDLIANIVHDGKPSEGSYRIHVLHHGTGKW 526
>gi|155372015|ref|NP_001094615.1| U4/U6.U5 tri-snRNP-associated protein 2 [Bos taurus]
gi|151556079|gb|AAI50036.1| USP39 protein [Bos taurus]
gi|296482482|tpg|DAA24597.1| TPA: ubiquitin specific protease 39 [Bos taurus]
Length = 565
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/466 (45%), Positives = 283/466 (60%), Gaps = 57/466 (12%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD 387
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+
Sbjct: 370 KEQLLHN---DEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFN 423
Query: 388 GETVTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKD 445
G T E + + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+ N++L++
Sbjct: 424 GITEKEYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLRE 482
Query: 446 YIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+ ++ + YDLIANIVHDGKP G YR+ V W
Sbjct: 483 YLSEEVQAVHKN--TTYDLIANIVHDGKPSEGSYRIHVLHHGTGKW 526
>gi|281342281|gb|EFB17865.1| hypothetical protein PANDA_011952 [Ailuropoda melanoleuca]
Length = 551
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/463 (46%), Positives = 282/463 (60%), Gaps = 58/463 (12%)
Query: 74 DDDEDKD-EDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLN 132
D DED + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS++N
Sbjct: 77 DADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLSHIN 132
Query: 133 VYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV 192
YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI +V
Sbjct: 133 AYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYV 192
Query: 193 ---------------------------------GLNNIKETDFVNVTIQSLMRVTPLRNF 219
GLNNIK D+ N +Q+L V PLRN+
Sbjct: 193 LKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNY 252
Query: 220 FLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFR 272
FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK F+
Sbjct: 253 FLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQ 312
Query: 273 IGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGNDQNT 330
I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + ++
Sbjct: 313 ITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEKEQ 372
Query: 331 EKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGET 390
+ D++ E++ F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+G T
Sbjct: 373 LLQN---DEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGIT 426
Query: 391 VTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIP 448
E + + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+ N++L++Y+
Sbjct: 427 EKEYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLS 485
Query: 449 LPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
++ + YDLIANIVHDGKP G YR+ V W
Sbjct: 486 EEVQAAHKN--TTYDLIANIVHDGKPSEGSYRIHVLHHGTGKW 526
>gi|170031567|ref|XP_001843656.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167870484|gb|EDS33867.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 535
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/466 (44%), Positives = 287/466 (61%), Gaps = 65/466 (13%)
Query: 73 EDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLN 132
EDDDED+ + + + RS+ CPYLDT+NR +LDFDFEK CSVSL+ +N
Sbjct: 37 EDDDEDEQKPKVKVDPAQA-ANRSK------QCPYLDTINRHLLDFDFEKLCSVSLTRIN 89
Query: 133 VYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV 192
VYACLVCGKY+QGRG +HAYTHS+ HHV++NL+T K YCLPD YEI D SL+DI++V
Sbjct: 90 VYACLVCGKYFQGRGTNTHAYTHSVAEAHHVFLNLQTLKFYCLPDNYEIIDSSLDDIKYV 149
Query: 193 ----------------------------------GLNNIKETDFVNVTIQSLMRVTPLRN 218
G+NNIK D+ NV +QSL V P+R+
Sbjct: 150 LNPVFSQRDIRNLDKEDQKMSRTVDGTIYAPGIVGMNNIKANDYCNVILQSLSHVKPIRD 209
Query: 219 FFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRF 271
FFLI +NY + K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ S K+F
Sbjct: 210 FFLIEKNYANTKRPPGDTAFTLVQRFGELLRKLWNPRNFKAHVSPHEMLQAVVLWSSKKF 269
Query: 272 RIGVQSNPVEFMSWLLNTLHSDLRNTKK-NTSIIYECFQGELEV-VKEIPKNTISGNDQN 329
+I Q +P+EF+SW L++LH LR K+ N+S++ F GE+++ +++P + +
Sbjct: 270 QITEQGDPIEFLSWFLHSLHKQLRGNKQPNSSVVNRTFLGEMKIYTRKLPPTELDDVQKQ 329
Query: 330 TEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE 389
+D + +T FL L DLP PLF D +NIIPQV L+ +L KF+
Sbjct: 330 LLLATDEYQEKSETST------FLYLTCDLPATPLFIDEFRENIIPQVNLYQLLAKFNAV 383
Query: 390 TVTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYI 447
+ E + + + R+ +TRLPK++IL+++RFTKN FF+EKNPT+VNFPVKN++ D +
Sbjct: 384 SEKEYKTYKENFLK-RFEITRLPKFVILYIKRFTKNTFFLEKNPTIVNFPVKNIDFGDIL 442
Query: 448 PLPTPKENEKLR--SKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+EN++ +KY+L+ANIVHDG+P+ G YR V +KS W
Sbjct: 443 ----TEENKRAHRFTKYNLVANIVHDGEPKSGTYRCHVLQKSTNQW 484
>gi|403303108|ref|XP_003942186.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 1
[Saimiri boliviensis boliviensis]
Length = 565
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/466 (45%), Positives = 283/466 (60%), Gaps = 57/466 (12%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREIDEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD 387
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+
Sbjct: 370 KEQLLHN---DEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFN 423
Query: 388 GETVTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKD 445
G T E + + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+ N++L++
Sbjct: 424 GITEKEYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLRE 482
Query: 446 YIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+ ++ + YDLIANIVHDGKP G YR+ V W
Sbjct: 483 YLSEEVQAVHKN--TTYDLIANIVHDGKPSEGSYRIHVLHHGTGKW 526
>gi|20070404|ref|NP_613058.1| U4/U6.U5 tri-snRNP-associated protein 2 [Mus musculus]
gi|88909656|sp|Q3TIX9.2|SNUT2_MOUSE RecName: Full=U4/U6.U5 tri-snRNP-associated protein 2; AltName:
Full=Inactive ubiquitin-specific peptidase 39
gi|12845893|dbj|BAB26944.1| unnamed protein product [Mus musculus]
gi|12858383|dbj|BAB31299.1| unnamed protein product [Mus musculus]
gi|20071704|gb|AAH26983.1| Ubiquitin specific peptidase 39 [Mus musculus]
gi|26353338|dbj|BAC40299.1| unnamed protein product [Mus musculus]
gi|74226993|dbj|BAE38302.1| unnamed protein product [Mus musculus]
gi|148666549|gb|EDK98965.1| ubiquitin specific peptidase 39, isoform CRA_a [Mus musculus]
Length = 564
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/466 (45%), Positives = 283/466 (60%), Gaps = 57/466 (12%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 73 REREADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 128
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 129 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 188
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 189 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 248
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 249 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 308
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 309 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVNDVFQGSMRIFTKKLPHPDLPAEE 368
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD 387
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+
Sbjct: 369 KEQLLHN---DEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFN 422
Query: 388 GETVTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKD 445
G T E + + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+ N++L++
Sbjct: 423 GITEKEYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLRE 481
Query: 446 YIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+ ++ + YDLIANIVHDGKP G YR+ V W
Sbjct: 482 YLSEEVQAVHKN--TTYDLIANIVHDGKPSEGSYRIHVLHHGTGKW 525
>gi|296223374|ref|XP_002757592.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 1
[Callithrix jacchus]
Length = 565
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/466 (45%), Positives = 283/466 (60%), Gaps = 57/466 (12%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREVDEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD 387
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+
Sbjct: 370 KEQLLHN---DEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFN 423
Query: 388 GETVTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKD 445
G T E + + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+ N++L++
Sbjct: 424 GITEKEYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLRE 482
Query: 446 YIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+ ++ + YDLIANIVHDGKP G YR+ V W
Sbjct: 483 YLSEEVQAVHKN--TTYDLIANIVHDGKPSEGSYRIHVLHHGTGKW 526
>gi|26337039|dbj|BAC32203.1| unnamed protein product [Mus musculus]
Length = 564
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/466 (45%), Positives = 283/466 (60%), Gaps = 57/466 (12%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 73 REREADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 128
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 129 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 188
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 189 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 248
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 249 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 308
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 309 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVNDVFQGSMRIFTKKLPHPDLPAEE 368
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD 387
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+
Sbjct: 369 KEQLLHN---DEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFN 422
Query: 388 GETVTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKD 445
G T E + + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+ N++L++
Sbjct: 423 GITEKEYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLRE 481
Query: 446 YIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+ ++ + YDLIANIVHDGKP G YR+ V W
Sbjct: 482 YLSEEVQAVHKN--TTYDLIANIVHDGKPSEGSYRIHVLHHGTGKW 525
>gi|354487022|ref|XP_003505674.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Cricetulus
griseus]
gi|344237085|gb|EGV93188.1| U4/U6.U5 tri-snRNP-associated protein 2 [Cricetulus griseus]
Length = 564
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/466 (45%), Positives = 283/466 (60%), Gaps = 57/466 (12%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 73 REREADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 128
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 129 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 188
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 189 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 248
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 249 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 308
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 309 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 368
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD 387
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+
Sbjct: 369 KEQLLHN---DEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFN 422
Query: 388 GETVTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKD 445
G T E + + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+ N++L++
Sbjct: 423 GITEKEYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLRE 481
Query: 446 YIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+ ++ + YDLIANIVHDGKP G YR+ V W
Sbjct: 482 YLSEEVQAVHKN--TTYDLIANIVHDGKPSEGSYRIHVLHHGTGKW 525
>gi|37231483|gb|AAH01384.2| USP39 protein, partial [Homo sapiens]
Length = 562
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/466 (45%), Positives = 283/466 (60%), Gaps = 57/466 (12%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 71 REREVDEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 126
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 127 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 186
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 187 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 246
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 247 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 306
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 307 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 366
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD 387
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+
Sbjct: 367 KEQLLHN---DEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFN 420
Query: 388 GETVTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKD 445
G T E + + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+ N++L++
Sbjct: 421 GITEKEYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLRE 479
Query: 446 YIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+ ++ + YDLIANIVHDGKP G YR+ V W
Sbjct: 480 YLSEEVQAVHKN--TTYDLIANIVHDGKPSEGSYRIHVLHHGTGKW 523
>gi|126305343|ref|XP_001363937.1| PREDICTED: u4/U6.U5 tri-snRNP-associated protein 2 [Monodelphis
domestica]
Length = 572
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 218/475 (45%), Positives = 288/475 (60%), Gaps = 60/475 (12%)
Query: 61 SGAKVGQNGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDF 120
SGA+V R E D++ + E E + G + R R CPYLDT+NR VLDFDF
Sbjct: 75 SGARVK---REREIDEDSEPEREVRVRYGRLDSEDRR----SRHCPYLDTINRSVLDFDF 127
Query: 121 EKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYE 180
EK CS+SLS++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YE
Sbjct: 128 EKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYE 187
Query: 181 INDPSLEDIRHV---------------------------------GLNNIKETDFVNVTI 207
I D SLEDI +V GLNNIK D+ N +
Sbjct: 188 IIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVL 247
Query: 208 QSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFL 260
Q+L V PLRN+FL ENY++ K P LV RFG+L RK+W+ RNFK VSPHE L
Sbjct: 248 QALSNVPPLRNYFLEEENYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEML 307
Query: 261 QAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEI 318
QAV+ SKK F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++
Sbjct: 308 QAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKL 367
Query: 319 PKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVP 378
P + ++ + D++ E++ F+ L LDLP PL+KD E+ IIPQVP
Sbjct: 368 PHPDLPAEEKEQLLHN---DEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVP 421
Query: 379 LFNILKKFDGETVTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNF 436
LFNIL KF+G T E + + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNF
Sbjct: 422 LFNILAKFNGITEKEYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNF 480
Query: 437 PVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
P+ N++L++Y+ ++ + YDLIANIVHDGKP G YR+ V W
Sbjct: 481 PITNVDLREYLSEEVQAVHKD--TTYDLIANIVHDGKPTEGSYRIHVLHHGTGKW 533
>gi|56550051|ref|NP_006581.2| U4/U6.U5 tri-snRNP-associated protein 2 isoform 1 [Homo sapiens]
gi|376319199|ref|NP_001243654.1| U4/U6.U5 tri-snRNP-associated protein 2 isoform 1 [Homo sapiens]
gi|88909655|sp|Q53GS9.2|SNUT2_HUMAN RecName: Full=U4/U6.U5 tri-snRNP-associated protein 2; AltName:
Full=Inactive ubiquitin-specific peptidase 39; AltName:
Full=SAD1 homolog; AltName: Full=U4/U6.U5
tri-snRNP-associated 65 kDa protein; Short=65K
gi|45595659|gb|AAH67273.1| USP39 protein [Homo sapiens]
gi|119619896|gb|EAW99490.1| ubiquitin specific peptidase 39, isoform CRA_a [Homo sapiens]
gi|119619898|gb|EAW99492.1| ubiquitin specific peptidase 39, isoform CRA_a [Homo sapiens]
gi|119619899|gb|EAW99493.1| ubiquitin specific peptidase 39, isoform CRA_a [Homo sapiens]
gi|158259925|dbj|BAF82140.1| unnamed protein product [Homo sapiens]
Length = 565
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/466 (45%), Positives = 283/466 (60%), Gaps = 57/466 (12%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREVDEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD 387
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+
Sbjct: 370 KEQLLHN---DEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFN 423
Query: 388 GETVTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKD 445
G T E + + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+ N++L++
Sbjct: 424 GITEKEYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLRE 482
Query: 446 YIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+ ++ + YDLIANIVHDGKP G YR+ V W
Sbjct: 483 YLSEEVQAVHKN--TTYDLIANIVHDGKPSEGSYRIHVLHHGTGKW 526
>gi|114578552|ref|XP_515591.2| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 4 [Pan
troglodytes]
gi|410217786|gb|JAA06112.1| ubiquitin specific peptidase 39 [Pan troglodytes]
gi|410292746|gb|JAA24973.1| ubiquitin specific peptidase 39 [Pan troglodytes]
gi|410338569|gb|JAA38231.1| ubiquitin specific peptidase 39 [Pan troglodytes]
gi|410338571|gb|JAA38232.1| ubiquitin specific peptidase 39 [Pan troglodytes]
Length = 565
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/466 (45%), Positives = 283/466 (60%), Gaps = 57/466 (12%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREVDEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD 387
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+
Sbjct: 370 KEQLLHN---DEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFN 423
Query: 388 GETVTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKD 445
G T E + + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+ N++L++
Sbjct: 424 GITEKEYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLRE 482
Query: 446 YIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+ ++ + YDLIANIVHDGKP G YR+ V W
Sbjct: 483 YLSEEVQAVHKN--TTYDLIANIVHDGKPSEGSYRIHVLHHGTGKW 526
>gi|344297576|ref|XP_003420473.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Loxodonta
africana]
Length = 565
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/466 (45%), Positives = 282/466 (60%), Gaps = 57/466 (12%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY+ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKTIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD 387
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+
Sbjct: 370 KEQLLHN---DEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFN 423
Query: 388 GETVTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKD 445
G T E + + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+ N++L++
Sbjct: 424 GITEKEYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLRE 482
Query: 446 YIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+ ++ + YDLIANIVHDGKP G YR+ V W
Sbjct: 483 YLSEEVQAVHKN--TTYDLIANIVHDGKPSEGSYRIHVLHHGTGKW 526
>gi|432102466|gb|ELK30043.1| U4/U6.U5 tri-snRNP-associated protein 2 [Myotis davidii]
Length = 608
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/458 (46%), Positives = 282/458 (61%), Gaps = 57/458 (12%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 72 REREADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 127
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 128 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 187
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 188 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 247
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 248 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 307
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 308 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 367
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD 387
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+
Sbjct: 368 K---EQLLHNDEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFN 421
Query: 388 GETVTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKD 445
G T E + + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+ N++L++
Sbjct: 422 GITEKEYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLRE 480
Query: 446 YIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFV 483
Y+ ++ + YDLIANIVHDGKP G YR+ V
Sbjct: 481 YLSEEVQAVHKN--TTYDLIANIVHDGKPSEGSYRIHV 516
>gi|57098329|ref|XP_532977.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 1 [Canis
lupus familiaris]
Length = 561
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/466 (45%), Positives = 283/466 (60%), Gaps = 57/466 (12%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 70 REREVDEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 125
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 126 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 185
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 186 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 245
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 246 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 305
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 306 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 365
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD 387
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+
Sbjct: 366 KEQLLHN---DEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFN 419
Query: 388 GETVTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKD 445
G T E + + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+ N++L++
Sbjct: 420 GITEKEYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLRE 478
Query: 446 YIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+ ++ + YDLIANIVHDGKP G YR+ V W
Sbjct: 479 YLSEEVQAVHKN--TTYDLIANIVHDGKPSEGSYRIHVLHHGTGKW 522
>gi|351709928|gb|EHB12847.1| U4/U6.U5 tri-snRNP-associated protein 2 [Heterocephalus glaber]
Length = 565
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/466 (45%), Positives = 283/466 (60%), Gaps = 57/466 (12%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD 387
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+
Sbjct: 370 KEQLLHN---DEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFN 423
Query: 388 GETVTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKD 445
G T E + + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+ N++L++
Sbjct: 424 GITEKEYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLRE 482
Query: 446 YIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+ ++ + YDLIANIVHDGKP G YR+ V W
Sbjct: 483 YLSEEVQAVHKN--TTYDLIANIVHDGKPSEGSYRIHVLHHGTGKW 526
>gi|195132721|ref|XP_002010791.1| GI21733 [Drosophila mojavensis]
gi|193907579|gb|EDW06446.1| GI21733 [Drosophila mojavensis]
Length = 492
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/433 (45%), Positives = 270/433 (62%), Gaps = 51/433 (11%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR +LDFDFEK CS+SL+ +NVYACLVCGKY+QGRG +HAYTHS+ HH
Sbjct: 35 RVCPYLDTINRNLLDFDFEKLCSISLTRINVYACLVCGKYFQGRGTNTHAYTHSVGEAHH 94
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL T + YCLPD YEI D SL+DI++V
Sbjct: 95 VFLNLHTLRFYCLPDNYEIIDSSLDDIKYVLNPTFLRNEISKLDQLQPKHSRTVDGVLYL 154
Query: 193 ----GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLT 241
GLNNIK D+ NV + +L V+PLR++FL +NY K P LV RFG+L
Sbjct: 155 PGVVGLNNIKANDYCNVVLHALSHVSPLRDYFLREQNYATIKRPPGDSMFTLVQRFGELM 214
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-N 300
RK+W+ RNFK VSPHE LQAV+ S KRF+I Q +P++F+SW LNTLH L+ K+ N
Sbjct: 215 RKMWNPRNFKAHVSPHEMLQAVVLWSNKRFQITEQGDPIDFLSWFLNTLHRALKGNKQPN 274
Query: 301 TSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDL 359
+SI+Y+ F GE+ + ++IP + + +D D + F+ L DL
Sbjct: 275 SSILYKIFLGEMNIYTRKIPPVELDDAAKQQLLATDEYKD------QVEHTNFIYLTCDL 328
Query: 360 PPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARM-RYRVTRLPKYMILHMR 418
PPPPLF D +NIIPQV L+ +L KF+G E M R+ +TRLP+++IL+++
Sbjct: 329 PPPPLFTDEFRENIIPQVNLYQLLAKFNGTAEKEYKTYKDNFMKRFEITRLPQFIILYIK 388
Query: 419 RFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGF 478
RFTKN FF+EKNPT+VNFP+KN++ D + + ++ K +KY+L+ANIVHDG P+ G
Sbjct: 389 RFTKNTFFLEKNPTIVNFPIKNVDFGDILGMKQRDKDLK-ETKYNLVANIVHDGDPKKGT 447
Query: 479 YRVFVQRKSEELW 491
YRV + K+ W
Sbjct: 448 YRVHILHKANGQW 460
>gi|348566421|ref|XP_003469000.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Cavia
porcellus]
Length = 565
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/466 (45%), Positives = 283/466 (60%), Gaps = 57/466 (12%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD 387
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+
Sbjct: 370 KEQLLHN---DEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFN 423
Query: 388 GETVTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKD 445
G T E + + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+ N++L++
Sbjct: 424 GITEKEYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLRE 482
Query: 446 YIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+ ++ + YDLIANIVHDGKP G YR+ V W
Sbjct: 483 YLSEEVQAVHKN--TTYDLIANIVHDGKPSEGSYRIHVLHHGTGKW 526
>gi|291386409|ref|XP_002709714.1| PREDICTED: ubiquitin specific protease 39 [Oryctolagus cuniculus]
Length = 565
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/463 (46%), Positives = 282/463 (60%), Gaps = 58/463 (12%)
Query: 74 DDDEDKD-EDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLN 132
D DED + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS++N
Sbjct: 77 DADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLSHIN 132
Query: 133 VYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV 192
YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI +V
Sbjct: 133 AYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYV 192
Query: 193 ---------------------------------GLNNIKETDFVNVTIQSLMRVTPLRNF 219
GLNNIK D+ N +Q+L V PLRN+
Sbjct: 193 LKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNY 252
Query: 220 FLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFR 272
FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK F+
Sbjct: 253 FLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQ 312
Query: 273 IGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGNDQNT 330
I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + ++
Sbjct: 313 ITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEKEQ 372
Query: 331 EKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGET 390
+ D++ E++ F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+G T
Sbjct: 373 LLHN---DEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGIT 426
Query: 391 VTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIP 448
E + + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+ N++L++Y+
Sbjct: 427 EKEYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLS 485
Query: 449 LPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
++ + YDLIANIVHDGKP G YR+ V W
Sbjct: 486 EEVQAVHKN--TTYDLIANIVHDGKPSEGSYRIHVLHHGTGKW 526
>gi|401395797|ref|XP_003879683.1| ubiquitin carboxyl-terminal hydrolase, related [Neospora caninum
Liverpool]
gi|325114090|emb|CBZ49648.1| ubiquitin carboxyl-terminal hydrolase, related [Neospora caninum
Liverpool]
Length = 562
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/430 (45%), Positives = 272/430 (63%), Gaps = 62/430 (14%)
Query: 100 EVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEA 159
++RR CPYL T+ R +LDFDFEK C + LSN +VYACLVC +Y+QGRG+ ++AY H+L+
Sbjct: 62 QLRRTCPYLGTIKRHLLDFDFEKVCCICLSNQHVYACLVCARYFQGRGKNTYAYMHALQE 121
Query: 160 GHHVYINLRTEKVYCLPDGYEINDPSLEDIRH---------------------------- 191
H+VY+NL+ +VYCLP+ YE+ D SL+DI +
Sbjct: 122 QHYVYLNLKDCRVYCLPENYEVKDASLDDIIYNLHPTYSTEDVAQLSTRIIYGKALDGAD 181
Query: 192 -----VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-----ENYRHCKSPLVHRFGDLT 241
VGLNN+K TDF N IQSL V PLRN+ L+ +NY P++ G+L
Sbjct: 182 YIPGCVGLNNLKRTDFCNAIIQSLCAVIPLRNWLLLLDLSHVQNY----DPVLQTLGELM 237
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNT 301
RKI++ARNFKG VSPHEFLQAV ASKK+FRIG Q++P++F WL+ +H ++ K N+
Sbjct: 238 RKIFNARNFKGIVSPHEFLQAVGVASKKKFRIGEQADPLQFFCWLMARVHQSAKHKKVNS 297
Query: 302 SIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPP 361
+++ +CFQGE+EV T +G G SR+PFL L LDLP
Sbjct: 298 NVVNDCFQGEVEV------------RTTTAEGEATGQ-----PPSVSRIPFLFLTLDLPQ 340
Query: 362 PPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFT 421
P+FKD +++N+IP +P+F++L+KF+GE + E P + RY + RLPKY++LH++RF+
Sbjct: 341 APIFKDSLDRNMIPHIPIFDLLQKFNGEQIQETT-PGTLK-RYSLWRLPKYLVLHVKRFS 398
Query: 422 KNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRV 481
KNNF+VEKNPT+V FPVK+L+L+DY+ P E + +KYDL+ANI H GKP G Y+V
Sbjct: 399 KNNFYVEKNPTIVTFPVKHLDLRDYVHEDAPMELNPV-TKYDLVANICHQGKPHDGQYKV 457
Query: 482 FVQRKSEELW 491
V W
Sbjct: 458 HVLHAPTNEW 467
>gi|346465657|gb|AEO32673.1| hypothetical protein [Amblyomma maculatum]
Length = 490
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/435 (46%), Positives = 267/435 (61%), Gaps = 54/435 (12%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
++CPYLDT+NR VLDFDFEK CSVSLS +NVYACLVCGKY+QGRG +HAYTHS++ HH
Sbjct: 18 QNCPYLDTINRNVLDFDFEKLCSVSLSRINVYACLVCGKYFQGRGTNTHAYTHSVQVSHH 77
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL+T + YCLPD YEI D SL+DI +V
Sbjct: 78 VFLNLQTLRFYCLPDNYEIVDSSLDDITYVLRPTFTKEDIVRLDTSDRLSRAYDGTTYLP 137
Query: 193 ---GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTR 242
GLNNIK D+ NV +Q+L V PLRN+FL ENY K P +V RFG+L R
Sbjct: 138 GIVGLNNIKANDYCNVILQALSHVPPLRNYFLREENYASLKRPPGDINSLIVQRFGELIR 197
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NT 301
K+W+ RNFK VSPHE LQAV+ SKKRF+I Q +P++F+SW LN+LH L T+ N+
Sbjct: 198 KLWNPRNFKAHVSPHEMLQAVVLCSKKRFQITQQGDPIDFLSWFLNSLHMALNGTQSINS 257
Query: 302 SIIYECFQGELEVV--KEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDL 359
SI+Y F+G + V K IP + + ++ + + R F+ L DL
Sbjct: 258 SIVYRTFRGGMNVYSRKVIPVEMTEAERRAALRTTEYDE-------KVERTGFMYLTADL 310
Query: 360 PPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARM-RYRVTRLPKYMILHMR 418
P PLFKD + +NIIPQVPLF IL KF+G + E + + R+ +T LP Y+IL+++
Sbjct: 311 PAQPLFKDELRENIIPQVPLFTILSKFNGTSEKEYRTYKDSTLKRFELTSLPPYLILYIK 370
Query: 419 RFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-- 476
RFTKN FFVEKNPT+VNFP+K+++L + I P E YDLIAN+VH+G+P
Sbjct: 371 RFTKNTFFVEKNPTIVNFPIKDVDLGELIAANVPDAIEGTYV-YDLIANVVHEGEPGSGK 429
Query: 477 GFYRVFVQRKSEELW 491
G YR + + W
Sbjct: 430 GTYRAHILHRGSGKW 444
>gi|157819503|ref|NP_001100067.1| U4/U6.U5 tri-snRNP-associated protein 2 [Rattus norvegicus]
gi|149036402|gb|EDL91020.1| ubiquitin specific protease 39 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 568
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/466 (45%), Positives = 282/466 (60%), Gaps = 57/466 (12%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 73 REREADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 128
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 129 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 188
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 189 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 248
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 249 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 308
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 309 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVNDVFQGSMRIFTKKLPHPDLPAEE 368
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD 387
+ E+ + + + T F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+
Sbjct: 369 K--EQLLHNEEYQETMVEST----FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFN 422
Query: 388 GETVTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKD 445
G T E + + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+ N++L++
Sbjct: 423 GITEKEYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLRE 481
Query: 446 YIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+ ++ + YDLIANIVHDGKP G YR+ V W
Sbjct: 482 YLSEEVQAVHKN--TTYDLIANIVHDGKPSEGSYRIHVLHHGTGKW 525
>gi|149036403|gb|EDL91021.1| ubiquitin specific protease 39 (predicted), isoform CRA_b [Rattus
norvegicus]
gi|183986109|gb|AAI66516.1| Usp39 protein [Rattus norvegicus]
Length = 564
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/466 (45%), Positives = 282/466 (60%), Gaps = 57/466 (12%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 73 REREADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 128
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 129 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 188
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 189 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 248
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 249 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 308
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 309 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVNDVFQGSMRIFTKKLPHPDLPAEE 368
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD 387
+ E+ + + + T F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+
Sbjct: 369 K--EQLLHNEEYQETMVEST----FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFN 422
Query: 388 GETVTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKD 445
G T E + + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+ N++L++
Sbjct: 423 GITEKEYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLRE 481
Query: 446 YIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+ ++ + YDLIANIVHDGKP G YR+ V W
Sbjct: 482 YLSEEVQAVHKN--TTYDLIANIVHDGKPSEGSYRIHVLHHGTGKW 525
>gi|195059123|ref|XP_001995568.1| GH17820 [Drosophila grimshawi]
gi|193896354|gb|EDV95220.1| GH17820 [Drosophila grimshawi]
Length = 491
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/433 (45%), Positives = 272/433 (62%), Gaps = 51/433 (11%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR +LDFDFEK CS+SL+ +NVYACLVCGKY+QGRG +HAYTHS+ HH
Sbjct: 34 RVCPYLDTINRNLLDFDFEKLCSISLTRINVYACLVCGKYFQGRGNNTHAYTHSVGEAHH 93
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL T + YCLPD YEI D SL+DI++V
Sbjct: 94 VFLNLHTLRFYCLPDNYEIIDSSLDDIKYVLNPTFLRNEISKLDQVQPKHSRTVDGILYL 153
Query: 193 ----GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLT 241
GLNNIK D+ NV + +L V+PLR++FL ++Y K P LV RFG+L
Sbjct: 154 PGVVGLNNIKANDYCNVVLHALSHVSPLRDYFLREQSYATIKRPPGDSMFTLVQRFGELM 213
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-N 300
RK+W+ RNFK VSPHE LQAV+ S KRF+I Q +P++F+SW LNTLH L+ K+ N
Sbjct: 214 RKMWNPRNFKAHVSPHEMLQAVVLWSSKRFQITEQGDPIDFLSWFLNTLHRALKGNKQPN 273
Query: 301 TSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDL 359
+SI+Y+ F GE+++ ++IP + + G+D D + + F+ L DL
Sbjct: 274 SSILYKIFLGEMKIYTRKIPPVELDDTAKQQLLGTDEYKD------QVEQTNFIYLTCDL 327
Query: 360 PPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARM-RYRVTRLPKYMILHMR 418
PPPPLF D +NIIPQV L+ +L KF+G E M R+ +TRLP+++IL+++
Sbjct: 328 PPPPLFTDEFRENIIPQVNLYQLLGKFNGSAEKEYKTYKDNFMKRFEITRLPQFIILYIK 387
Query: 419 RFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGF 478
RFTKN FF+EKNPT+VNFP+KN++ D + + + K +KY+L+ANIVHDG P+ G
Sbjct: 388 RFTKNTFFLEKNPTIVNFPIKNVDFGDILGMKQRDKGIK-DTKYNLVANIVHDGDPKKGT 446
Query: 479 YRVFVQRKSEELW 491
YRV + K+ W
Sbjct: 447 YRVHILHKANGQW 459
>gi|74198469|dbj|BAE39717.1| unnamed protein product [Mus musculus]
Length = 564
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/466 (45%), Positives = 283/466 (60%), Gaps = 57/466 (12%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 73 REREADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 128
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 129 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 188
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 189 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 248
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 249 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 308
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 309 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVNDVFQGSMRIFTKKLPHPDLPAEE 368
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD 387
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+
Sbjct: 369 KEQLLHN---DEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFN 422
Query: 388 GETVTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKD 445
G T E + + + R+++T+LP Y+I ++RFTKNNFFVE+NPT+VNFP+ N++L++
Sbjct: 423 GITEKEYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEENPTIVNFPITNVDLRE 481
Query: 446 YIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+ ++ + YDLIANIVHDGKP G YR+ V W
Sbjct: 482 YLSEEVQAVHKN--TTYDLIANIVHDGKPSEGSYRIHVLHHGTGKW 525
>gi|13926071|gb|AAK49524.1|AF353989_1 U4/U6.U5 tri-snRNP-associated 65 kDa protein [Homo sapiens]
Length = 565
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/466 (45%), Positives = 282/466 (60%), Gaps = 57/466 (12%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREVDEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD 387
+ + D++ E++ F+ L LDLP P +KD E+ IIPQVPLFNIL KF+
Sbjct: 370 KEQLLHN---DEYQETMVEST---FMYLTLDLPTAPFYKDEKEQLIIPQVPLFNILAKFN 423
Query: 388 GETVTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKD 445
G T E + + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+ N++L++
Sbjct: 424 GITEKEYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLRE 482
Query: 446 YIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+ ++ + YDLIANIVHDGKP G YR+ V W
Sbjct: 483 YLSEEVQAVHKN--TTYDLIANIVHDGKPSEGSYRIHVLHHGTGKW 526
>gi|157124289|ref|XP_001660405.1| ubiquitin specific protease 39 and snrnp assembly factor [Aedes
aegypti]
gi|108882840|gb|EAT47065.1| AAEL001827-PA [Aedes aegypti]
Length = 520
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/432 (46%), Positives = 273/432 (63%), Gaps = 54/432 (12%)
Query: 105 CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVY 164
CPYLDT+NR +LDFDFEK CSVSL+ +NVYACLVCGKY+QGRG +HAYTHS+ HHV+
Sbjct: 58 CPYLDTINRHLLDFDFEKLCSVSLTRINVYACLVCGKYFQGRGTNTHAYTHSVAESHHVF 117
Query: 165 INLRTEKVYCLPDGYEINDPSLEDIRHV-------------------------------- 192
+NL T K YCLPD YEI D SL+DI++V
Sbjct: 118 LNLSTLKFYCLPDNYEIIDSSLDDIKYVLNPVFTGRDIRNLDKEDQKMSRTVDGTLYSPG 177
Query: 193 --GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTRK 243
G+NNIK D+ NV +QSL V P+R+FFLI +NY + K P LV RFG+L RK
Sbjct: 178 IVGMNNIKANDYCNVILQSLSHVKPIRDFFLIEKNYANIKRPPGDTAFTLVQRFGELLRK 237
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NTS 302
+W+ RNFK VSPHE LQAV+ S K+F+I Q +P+EF+SW L+ LH LR K+ N+S
Sbjct: 238 LWNPRNFKPHVSPHEMLQAVVLWSSKKFQITEQGDPIEFLSWFLHILHKQLRGNKQPNSS 297
Query: 303 IIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPP 361
++Y F GE+++ +++P + + +D + + + T T FL L DLP
Sbjct: 298 VVYRTFLGEMKIYTRKLPPTELDDVQKQLLLATD--EYQEKVETST----FLYLTCDLPA 351
Query: 362 PPLFKDVMEKNIIPQVPLFNILKKFDGETVTE--VVRPHVARMRYRVTRLPKYMILHMRR 419
PLF D +NIIPQV L+ +L KF+ + E + + + R+ +TRLPK++IL+++R
Sbjct: 352 TPLFIDEFRENIIPQVNLYQLLAKFNSVSEKEYKTYKENFLK-RFEITRLPKFIILYIKR 410
Query: 420 FTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFY 479
FTKN FF+EKNPT+VNFPVKN++ D + K+++ +KY+L+ANIVHDG+P G Y
Sbjct: 411 FTKNTFFLEKNPTIVNFPVKNIDFGDILTEENKKQHQ--YTKYNLVANIVHDGEPNAGTY 468
Query: 480 RVFVQRKSEELW 491
R + +KS W
Sbjct: 469 RCHILQKSTNQW 480
>gi|197097880|ref|NP_001126415.1| U4/U6.U5 tri-snRNP-associated protein 2 [Pongo abelii]
gi|75054842|sp|Q5R761.1|SNUT2_PONAB RecName: Full=U4/U6.U5 tri-snRNP-associated protein 2; AltName:
Full=Inactive ubiquitin-specific peptidase 39
gi|55731370|emb|CAH92399.1| hypothetical protein [Pongo abelii]
Length = 565
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/466 (45%), Positives = 282/466 (60%), Gaps = 57/466 (12%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+S S
Sbjct: 74 REREVDEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISPS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HVNAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD 387
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+
Sbjct: 370 KEQLLHN---DEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFN 423
Query: 388 GETVTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKD 445
G T E + + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+ N++L++
Sbjct: 424 GITEKEYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLRE 482
Query: 446 YIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+ +E + YDLIANIVHDGKP G YR+ V W
Sbjct: 483 YLSEEVQAVHEN--TTYDLIANIVHDGKPSEGSYRIHVLHHGTGKW 526
>gi|62897263|dbj|BAD96572.1| ubiquitin specific protease 39 variant [Homo sapiens]
Length = 565
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/466 (45%), Positives = 282/466 (60%), Gaps = 57/466 (12%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREVDEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N Y CLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYVCLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD 387
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+
Sbjct: 370 KEQLLHN---DEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFN 423
Query: 388 GETVTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKD 445
G T E + + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+ N++L++
Sbjct: 424 GITEKEYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLRE 482
Query: 446 YIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+ ++ + YDLIANIVHDGKP G YR+ V W
Sbjct: 483 YLSEEVQAVHKN--TTYDLIANIVHDGKPSEGSYRIHVLHHGTGKW 526
>gi|237841835|ref|XP_002370215.1| ubiquitin carboxyl-terminal hydrolase, putative [Toxoplasma gondii
ME49]
gi|211967879|gb|EEB03075.1| ubiquitin carboxyl-terminal hydrolase, putative [Toxoplasma gondii
ME49]
gi|221503124|gb|EEE28830.1| ubiquitin carboxyl-terminal hydrolase, putative [Toxoplasma gondii
VEG]
Length = 571
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/430 (45%), Positives = 272/430 (63%), Gaps = 62/430 (14%)
Query: 100 EVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEA 159
++RR CPYL T+ R +LDFDFEK C + LSN +VYACLVC +Y+QGRG+ ++AY H+L+
Sbjct: 70 QLRRTCPYLGTIKRHLLDFDFEKVCCICLSNQHVYACLVCARYFQGRGKNTYAYMHALQE 129
Query: 160 GHHVYINLRTEKVYCLPDGYEINDPSLEDIRH---------------------------- 191
H+VY+NL+ +VYCLP+ YE+ D SL+DI +
Sbjct: 130 QHYVYLNLKDCRVYCLPENYEVKDASLDDIIYNLHPTYTKEDVAQLSTRIIYGKALDGAD 189
Query: 192 -----VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-----ENYRHCKSPLVHRFGDLT 241
VGLNN+K TDF N IQSL V PLRN+ L+ +NY P++ G+L
Sbjct: 190 YIPGCVGLNNLKRTDFCNAMIQSLCTVVPLRNWLLLLDLSHVQNY----DPVLQTLGELM 245
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNT 301
RKI++ARNFKG VSPHEFLQAV ASKK+FRIG Q++P++F WL+ +H ++ K N+
Sbjct: 246 RKIFNARNFKGIVSPHEFLQAVGVASKKKFRIGEQADPLQFFCWLMTRVHQSAKHKKLNS 305
Query: 302 SIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPP 361
+++ +CFQGE+EV T +G G SR+PFL L LDLP
Sbjct: 306 NVVNDCFQGEVEV------------RTTTAEGEATGQ-----PPSVSRVPFLFLTLDLPQ 348
Query: 362 PPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFT 421
P+FKD +++N+IP +P+F++L+KF+GE + E P + RY + RLPKY++LH++RF+
Sbjct: 349 APIFKDSLDRNMIPHIPIFDLLQKFNGEQIQEAT-PGTLK-RYSLWRLPKYLVLHVKRFS 406
Query: 422 KNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRV 481
KNNF+VEKNPT+V FPVK+L+L++Y+ P + + +KYDL+ANI H GKP G Y+V
Sbjct: 407 KNNFYVEKNPTIVTFPVKHLDLREYVHEDAPADLNPV-AKYDLVANICHQGKPHDGQYKV 465
Query: 482 FVQRKSEELW 491
V W
Sbjct: 466 HVLHAPTNEW 475
>gi|221482682|gb|EEE21020.1| ubiquitin carboxyl-terminal hydrolase, putative [Toxoplasma gondii
GT1]
Length = 574
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/431 (44%), Positives = 272/431 (63%), Gaps = 61/431 (14%)
Query: 100 EVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEA 159
++RR CPYL T+ R +LDFDFEK C + LSN +VYACLVC +Y+QGRG+ ++AY H+L+
Sbjct: 70 QLRRTCPYLGTIKRHLLDFDFEKVCCICLSNQHVYACLVCARYFQGRGKNTYAYMHALQE 129
Query: 160 GHHVYINLRTEKVYCLPDGYEINDPSLEDIRH---------------------------- 191
H+VY+NL+ +VYCLP+ YE+ D SL+DI +
Sbjct: 130 QHYVYLNLKDCRVYCLPENYEVKDASLDDIIYNLHPTYTKEDVAQLSTRIIYGKALDGAD 189
Query: 192 -----VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-----ENYRHCKSPLVHRFGDLT 241
VGLNN+K TDF N IQSL V PLRN+ L+ +NY P++ G+L
Sbjct: 190 YIPGCVGLNNLKRTDFCNAMIQSLCTVVPLRNWLLLLDLSHVQNY----DPVLQTLGELM 245
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNT 301
RKI++ARNFKG VSPHEFLQAV ASKK+FRIG Q++P++F WL+ +H ++ K N+
Sbjct: 246 RKIFNARNFKGIVSPHEFLQAVGVASKKKFRIGEQADPLQFFCWLMTRVHQSAKHKKLNS 305
Query: 302 SIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPP 361
+++ +CFQGE+EV T +G G SR+PFL L LDLP
Sbjct: 306 NVVNDCFQGEVEV------------RTTTAEGEATGQ-----PPSVSRVPFLFLTLDLPQ 348
Query: 362 PPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARM-RYRVTRLPKYMILHMRRF 420
P+FKD +++N+IP +P+F++L+KF+GE + +R + RY + RLPKY++LH++RF
Sbjct: 349 APIFKDSLDRNMIPHIPIFDLLQKFNGEQIQVRLRATPGTLKRYSLWRLPKYLVLHVKRF 408
Query: 421 TKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYR 480
+KNNF+VEKNPT+V FPVK+L+L++Y+ P + + +KYDL+ANI H GKP G Y+
Sbjct: 409 SKNNFYVEKNPTIVTFPVKHLDLREYVHEDAPADLNPV-AKYDLVANICHQGKPHDGQYK 467
Query: 481 VFVQRKSEELW 491
V V W
Sbjct: 468 VHVLHAPTNEW 478
>gi|95007145|emb|CAJ20366.1| ubiquitin carboxyl-terminal hydrolase, putative [Toxoplasma gondii
RH]
Length = 570
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/430 (45%), Positives = 272/430 (63%), Gaps = 62/430 (14%)
Query: 100 EVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEA 159
++RR CPYL T+ R +LDFDFEK C + LSN +VYACLVC +Y+QGRG+ ++AY H+L+
Sbjct: 69 QLRRTCPYLGTIKRHLLDFDFEKVCCICLSNQHVYACLVCARYFQGRGKNTYAYMHALQE 128
Query: 160 GHHVYINLRTEKVYCLPDGYEINDPSLEDIRH---------------------------- 191
H+VY+NL+ +VYCLP+ YE+ D SL+DI +
Sbjct: 129 QHYVYLNLKDCRVYCLPENYEVKDASLDDIIYNLHPTYTKEDVAQLSTRIIYGKALDGAD 188
Query: 192 -----VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-----ENYRHCKSPLVHRFGDLT 241
VGLNN+K TDF N IQSL V PLRN+ L+ +NY P++ G+L
Sbjct: 189 YIPGCVGLNNLKRTDFCNAMIQSLCTVVPLRNWLLLLDLSHVQNY----DPVLQTLGELM 244
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNT 301
RKI++ARNFKG VSPHEFLQAV ASKK+FRIG Q++P++F WL+ +H ++ K N+
Sbjct: 245 RKIFNARNFKGIVSPHEFLQAVGVASKKKFRIGEQADPLQFFCWLMTRVHQSAKHKKLNS 304
Query: 302 SIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPP 361
+++ +CFQGE+EV T +G G SR+PFL L LDLP
Sbjct: 305 NVVNDCFQGEVEV------------RTTTAEGEATGQ-----PPSVSRVPFLFLTLDLPQ 347
Query: 362 PPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFT 421
P+FKD +++N+IP +P+F++L+KF+GE + E P + RY + RLPKY++LH++RF+
Sbjct: 348 APIFKDSLDRNMIPHIPIFDLLQKFNGEQIQEAT-PGTLK-RYSLWRLPKYLVLHVKRFS 405
Query: 422 KNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRV 481
KNNF+VEKNPT+V FPVK+L+L++Y+ P + + +KYDL+ANI H GKP G Y+V
Sbjct: 406 KNNFYVEKNPTIVTFPVKHLDLREYVHEDAPADLNPV-AKYDLVANICHQGKPHDGQYKV 464
Query: 482 FVQRKSEELW 491
V W
Sbjct: 465 HVLHAPTNEW 474
>gi|195392656|ref|XP_002054973.1| GJ19115 [Drosophila virilis]
gi|194149483|gb|EDW65174.1| GJ19115 [Drosophila virilis]
Length = 493
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/433 (46%), Positives = 274/433 (63%), Gaps = 51/433 (11%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR +LDFDFEK CS+SL+ +NVYACLVCGKY+QGRG +HAYTHS+ HH
Sbjct: 36 RVCPYLDTINRNLLDFDFEKLCSISLTRINVYACLVCGKYFQGRGTNTHAYTHSVGEAHH 95
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL T + YCLPD YEI D SL+DI++V
Sbjct: 96 VFLNLHTLRFYCLPDNYEIIDSSLDDIKYVLNPTFLRNEISKLDKVKPKHSRTVDGILYL 155
Query: 193 ----GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLT 241
GLNNIK D+ NV + +L V PLR++FL +NY K P LV RFG+L
Sbjct: 156 PGVVGLNNIKANDYCNVVLHALSHVGPLRDYFLREQNYATIKRPPGDSMFTLVQRFGELM 215
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-N 300
RK+W+ RNFK VSPHE LQAV+ S KRF+I Q +P++F+SW LNTLH L+ K+ N
Sbjct: 216 RKMWNPRNFKAHVSPHEMLQAVVLWSSKRFQITEQGDPIDFLSWFLNTLHRALKGNKQPN 275
Query: 301 TSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDL 359
+SI+Y+ F GE+++ ++IP + D + ++ D++ + T+ F+ L DL
Sbjct: 276 SSILYKIFLGEMKIYTRKIPPVEL---DDSAKQQLLATDEYKHQVEHTN---FIYLTCDL 329
Query: 360 PPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARM-RYRVTRLPKYMILHMR 418
PPPPLF D +NIIPQV L+ +L KF+G E M R+ +TRLP+++IL+++
Sbjct: 330 PPPPLFTDEFRENIIPQVNLYQLLGKFNGSAEKEYKTYKDNFMKRFEITRLPQFIILYIK 389
Query: 419 RFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGF 478
RFTKN FF+EKNPT+VNFP+KN++ D + + + K +KY+L+ANIVHDG P+ G
Sbjct: 390 RFTKNTFFLEKNPTIVNFPIKNVDFGDILGMKQRDKALK-ETKYNLVANIVHDGDPKKGT 448
Query: 479 YRVFVQRKSEELW 491
YRV + K+ W
Sbjct: 449 YRVHILHKANGQW 461
>gi|440909376|gb|ELR59288.1| U4/U6.U5 tri-snRNP-associated protein 2, partial [Bos grunniens
mutus]
Length = 476
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/433 (47%), Positives = 271/433 (62%), Gaps = 53/433 (12%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR VLDFDFEK CS+SLS++N YACLVCGKY+QGRG KSHAY HS++ HH
Sbjct: 14 RHCPYLDTINRSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHH 73
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL T K YCLPD YEI D SLEDI +V
Sbjct: 74 VFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLP 133
Query: 193 ---GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTR 242
GLNNIK D+ N +Q+L V PLRN+FL +NY++ K P LV RFG+L R
Sbjct: 134 GIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMR 193
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNT 301
K+W+ RNFK VSPHE LQAV+ SKK F+I Q + V+F+SW LN LHS L KK
Sbjct: 194 KLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKK 253
Query: 302 SIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLP 360
+I+ + FQG + + K++P + ++ + D++ E++ F+ L LDLP
Sbjct: 254 TIVTDVFQGSMRIFTKKLPHPDLPAEEK---EQLLHNDEYQETMVEST---FMYLTLDLP 307
Query: 361 PPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE--VVRPHVARMRYRVTRLPKYMILHMR 418
PL+KD E+ IIPQVPLFNIL KF+G T E + + + R+++T+LP Y+I ++
Sbjct: 308 TAPLYKDEKEQLIIPQVPLFNILAKFNGITEKEYKTYKENFLK-RFQLTKLPPYLIFCIK 366
Query: 419 RFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGF 478
RFTKNNFFVEKNPT+VNFP+ N++L++Y+ ++ + YDLIANIVHDGKP G
Sbjct: 367 RFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQAVHK--NTTYDLIANIVHDGKPSEGS 424
Query: 479 YRVFVQRKSEELW 491
YR+ V W
Sbjct: 425 YRIHVLHHGTGKW 437
>gi|312380834|gb|EFR26723.1| hypothetical protein AND_06979 [Anopheles darlingi]
Length = 593
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/445 (44%), Positives = 280/445 (62%), Gaps = 58/445 (13%)
Query: 94 QRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAY 153
++ + + + CPYLDT+NR +LDFDFEK CSVSL+ +NVYACLVCGKY+QGRG +HAY
Sbjct: 126 RKQTITDRSKQCPYLDTINRHLLDFDFEKLCSVSLTRINVYACLVCGKYFQGRGTNTHAY 185
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV--------------------- 192
THS+ HHV++NL T K YCLPD YEI D SL+DI++V
Sbjct: 186 THSVAESHHVFLNLSTLKFYCLPDNYEIIDSSLDDIKYVLDPVFTVRDIRHLDDEDVKQS 245
Query: 193 -------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP------- 232
GLNNIK D+ NV +Q+L V P+R+FFL+ +NY + K P
Sbjct: 246 RTVDGTFYNPGVVGLNNIKANDYCNVILQALSHVKPIRDFFLMEKNYANIKRPPGDTAFT 305
Query: 233 LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHS 292
LV RFG+L RK+W+ RNFK VSPHE LQAV+ S K+F+I Q +P+EF+SW L++LH
Sbjct: 306 LVQRFGELLRKLWNPRNFKAHVSPHEMLQAVVLWSNKQFQITKQGDPIEFLSWFLHSLHK 365
Query: 293 DLR-NTKKNTSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM 350
LR N + N+S++ F GE+++ +++P + + +D + + +T
Sbjct: 366 QLRGNRQPNSSVVNRSFLGEMKIYTRKLPPTELDDVQKQLLLATDEYQEKEETST----- 420
Query: 351 PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD--GETVTEVVRPHVARMRYRVTR 408
FL L DLP PLF D + +NIIPQV L+ +L KF+ E + + + + R+ +TR
Sbjct: 421 -FLYLTCDLPATPLFIDELRENIIPQVNLYQLLAKFNSISEKEYKTYKENFLK-RFEITR 478
Query: 409 LPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLR--SKYDLIA 466
LPKY+IL+++RFTKN FF+EKNPT+VNFPVKN++L D + +EN+K +KY+L+A
Sbjct: 479 LPKYVILYIKRFTKNTFFLEKNPTIVNFPVKNVDLGDIL----TEENKKTHPFTKYNLVA 534
Query: 467 NIVHDGKPEGGFYRVFVQRKSEELW 491
NIVHDG+P G YR + +KS W
Sbjct: 535 NIVHDGEPNSGTYRCHILQKSTNQW 559
>gi|332239223|ref|XP_003268806.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 1
[Nomascus leucogenys]
Length = 487
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/433 (47%), Positives = 271/433 (62%), Gaps = 53/433 (12%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR VLDFDFEK CS+SLS++N YACLVCGKY+QGRG KSHAY HS++ HH
Sbjct: 25 RHCPYLDTINRSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHH 84
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL T K YCLPD YEI D SLEDI +V
Sbjct: 85 VFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLP 144
Query: 193 ---GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTR 242
GLNNIK D+ N +Q+L V PLRN+FL +NY++ K P LV RFG+L R
Sbjct: 145 GIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMR 204
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNT 301
K+W+ RNFK VSPHE LQAV+ SKK F+I Q + V+F+SW LN LHS L KK
Sbjct: 205 KLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKK 264
Query: 302 SIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLP 360
+I+ + FQG + + K++P + ++ + D++ E++ F+ L LDLP
Sbjct: 265 TIVTDVFQGSMRIFTKKLPHPDLPAEEK---EQLLHNDEYQETMVEST---FMYLTLDLP 318
Query: 361 PPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE--VVRPHVARMRYRVTRLPKYMILHMR 418
PL+KD E+ IIPQVPLFNIL KF+G T E + + + R+++T+LP Y+I ++
Sbjct: 319 TAPLYKDEKEQLIIPQVPLFNILAKFNGITEKEYKTYKENFLK-RFQLTKLPPYLIFCIK 377
Query: 419 RFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGF 478
RFTKNNFFVEKNPT+VNFP+ N++L++Y+ ++ + YDLIANIVHDGKP G
Sbjct: 378 RFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQAVHKN--TTYDLIANIVHDGKPSEGS 435
Query: 479 YRVFVQRKSEELW 491
YR+ V W
Sbjct: 436 YRIHVLHHGTGKW 448
>gi|194892734|ref|XP_001977718.1| GG19194 [Drosophila erecta]
gi|190649367|gb|EDV46645.1| GG19194 [Drosophila erecta]
Length = 494
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/433 (45%), Positives = 270/433 (62%), Gaps = 51/433 (11%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR +LDFDFEK CS+SL+ +NVYACLVCGKY+QGRG +HAYTHS+ HH
Sbjct: 36 RVCPYLDTINRNLLDFDFEKLCSISLTRINVYACLVCGKYFQGRGTNTHAYTHSVGEAHH 95
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL T + YCLPD YEI D SL+DI++V
Sbjct: 96 VFLNLHTLRFYCLPDNYEIIDSSLDDIKYVLNPTFTRQEISKLDQLQPKHSRTVDGVLYL 155
Query: 193 ----GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLT 241
GLNNIK D+ NV + +L V PLR++FL ++Y H K P LV RFG+L
Sbjct: 156 PGVVGLNNIKANDYCNVVLHALSHVGPLRDYFLREQSYAHVKRPPGDSMFTLVQRFGELM 215
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-N 300
RK+W+ RNFK VSPHE LQAV+ S KRF+I Q +P++F+SW LNTLH L+ K+ N
Sbjct: 216 RKMWNPRNFKSHVSPHEMLQAVVLWSSKRFQITEQGDPIDFLSWFLNTLHRALKGNKQPN 275
Query: 301 TSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDL 359
+SI+Y+ F GE+++ ++IP + + ++ D T F+ L DL
Sbjct: 276 SSILYKIFLGEMKIYTRKIPPVELDDAAKAQLLATEEYKDQVEYTN------FIYLTCDL 329
Query: 360 PPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARM-RYRVTRLPKYMILHMR 418
PPPPLF D +NIIPQV L+ +L KF+G E M R+ +TRLP+++IL+++
Sbjct: 330 PPPPLFTDEFRENIIPQVNLYQLLGKFNGSAEKEYKTYKDNFMKRFEITRLPQFIILYIK 389
Query: 419 RFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGF 478
RFTKN FF+EKNPT+VNFP+KN++ D + + ++ K +KY+L+ANIVHDG P+ G
Sbjct: 390 RFTKNTFFLEKNPTIVNFPIKNVDFGDILGMRQRDKDVK-DTKYNLVANIVHDGDPKKGT 448
Query: 479 YRVFVQRKSEELW 491
YR + K+ W
Sbjct: 449 YRAHILHKANGQW 461
>gi|376319203|ref|NP_001243656.1| U4/U6.U5 tri-snRNP-associated protein 2 isoform 3 [Homo sapiens]
gi|114578548|ref|XP_001167639.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 2 [Pan
troglodytes]
Length = 487
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/433 (47%), Positives = 271/433 (62%), Gaps = 53/433 (12%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR VLDFDFEK CS+SLS++N YACLVCGKY+QGRG KSHAY HS++ HH
Sbjct: 25 RHCPYLDTINRSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHH 84
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL T K YCLPD YEI D SLEDI +V
Sbjct: 85 VFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLP 144
Query: 193 ---GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTR 242
GLNNIK D+ N +Q+L V PLRN+FL +NY++ K P LV RFG+L R
Sbjct: 145 GIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMR 204
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNT 301
K+W+ RNFK VSPHE LQAV+ SKK F+I Q + V+F+SW LN LHS L KK
Sbjct: 205 KLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKK 264
Query: 302 SIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLP 360
+I+ + FQG + + K++P + ++ + D++ E++ F+ L LDLP
Sbjct: 265 TIVTDVFQGSMRIFTKKLPHPDLPAEEK---EQLLHNDEYQETMVEST---FMYLTLDLP 318
Query: 361 PPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE--VVRPHVARMRYRVTRLPKYMILHMR 418
PL+KD E+ IIPQVPLFNIL KF+G T E + + + R+++T+LP Y+I ++
Sbjct: 319 TAPLYKDEKEQLIIPQVPLFNILAKFNGITEKEYKTYKENFLK-RFQLTKLPPYLIFCIK 377
Query: 419 RFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGF 478
RFTKNNFFVEKNPT+VNFP+ N++L++Y+ ++ + YDLIANIVHDGKP G
Sbjct: 378 RFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQAVHK--NTTYDLIANIVHDGKPSEGS 435
Query: 479 YRVFVQRKSEELW 491
YR+ V W
Sbjct: 436 YRIHVLHHGTGKW 448
>gi|195481512|ref|XP_002101675.1| GE17756 [Drosophila yakuba]
gi|194189199|gb|EDX02783.1| GE17756 [Drosophila yakuba]
Length = 494
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/433 (45%), Positives = 270/433 (62%), Gaps = 51/433 (11%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR +LDFDFEK CS+SL+ +NVYACLVCGKY+QGRG +HAYTHS+ HH
Sbjct: 36 RVCPYLDTINRNLLDFDFEKLCSISLTRINVYACLVCGKYFQGRGTNTHAYTHSVGEAHH 95
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL T + YCLPD YEI D SL+DI++V
Sbjct: 96 VFLNLHTLRFYCLPDNYEIIDSSLDDIKYVLNPTFTRQEISKLDQLQPKHSRTVDGVLYL 155
Query: 193 ----GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLT 241
GLNNIK D+ NV + +L V PLR++FL ++Y H K P LV RFG+L
Sbjct: 156 PGVVGLNNIKANDYCNVVLHALSHVGPLRDYFLREQSYAHVKRPPGDSMFTLVQRFGELM 215
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-N 300
RK+W+ RNFK VSPHE LQAV+ S KRF+I Q +P++F+SW LNTLH L+ K+ N
Sbjct: 216 RKMWNPRNFKSHVSPHEMLQAVVLWSSKRFQITEQGDPIDFLSWFLNTLHRALKGNKQPN 275
Query: 301 TSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDL 359
+SI+Y+ F GE+++ ++IP + + ++ D + F+ L DL
Sbjct: 276 SSILYKIFLGEMKIYTRKIPPVELDDAAKAQLLATEEYKD------QVEHTNFIYLTCDL 329
Query: 360 PPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARM-RYRVTRLPKYMILHMR 418
PPPPLF D +NIIPQV L+ +L KF+G E M R+ +TRLP+++IL+++
Sbjct: 330 PPPPLFTDEFRENIIPQVNLYQLLGKFNGSAEKEYKTYKDNFMKRFEITRLPQFIILYIK 389
Query: 419 RFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGF 478
RFTKN FF+EKNPT+VNFP+KN++ D + + ++ K +KY+L+ANIVHDG P+ G
Sbjct: 390 RFTKNTFFLEKNPTIVNFPIKNVDFGDILGMRQRDKDVK-DTKYNLVANIVHDGDPKKGT 448
Query: 479 YRVFVQRKSEELW 491
YR + K+ W
Sbjct: 449 YRAHILHKANGQW 461
>gi|397491429|ref|XP_003816666.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Pan paniscus]
Length = 545
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/466 (45%), Positives = 278/466 (59%), Gaps = 77/466 (16%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREVDEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP-------- 361
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD 387
H +++T F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+
Sbjct: 362 ------------HPDLST------FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFN 403
Query: 388 GETVTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKD 445
G T E + + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+ N++L++
Sbjct: 404 GITEKEYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLRE 462
Query: 446 YIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+ ++ + YDLIANIVHDGKP G YR+ V W
Sbjct: 463 YLSEEVQAVHKN--TTYDLIANIVHDGKPSEGSYRIHVLHHGTGKW 506
>gi|195345567|ref|XP_002039340.1| GM22925 [Drosophila sechellia]
gi|194134566|gb|EDW56082.1| GM22925 [Drosophila sechellia]
Length = 494
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/437 (45%), Positives = 271/437 (62%), Gaps = 59/437 (13%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR +LDFDFEK CS+SL+ +NVYACLVCGKY+QGRG +HAYTHS+ HH
Sbjct: 36 RVCPYLDTINRNLLDFDFEKLCSISLTRINVYACLVCGKYFQGRGTNTHAYTHSVGEAHH 95
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL T + YCLPD YEI D SL+DI++V
Sbjct: 96 VFLNLHTLRFYCLPDNYEIIDSSLDDIKYVLNPTFTRQEISKLDQLQPKHSRTVDGVLYL 155
Query: 193 ----GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLT 241
GLNNIK D+ NV + +L V PLR++FL ++Y H P LV RFG+L
Sbjct: 156 PGVVGLNNIKANDYCNVVLHALSHVGPLRDYFLQKQSYAHVMRPPGDSVFTLVQRFGELM 215
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-N 300
RK+W+ RNFK VSPHE LQAV+ S KRF+I Q +P++F+SW LNTLH L+ K+ N
Sbjct: 216 RKMWNPRNFKSHVSPHEMLQAVVLWSSKRFQITEQGDPIDFLSWFLNTLHRALKGNKQPN 275
Query: 301 TSIIYECFQGELEV-VKEIP----KNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLML 355
+SI+Y+ F GE+++ ++IP + TE+ D +D + F+ L
Sbjct: 276 SSILYKIFLGEMKIYTRKIPPVELDDATKAKLLATEEYKDQVEDKN----------FIYL 325
Query: 356 GLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARM-RYRVTRLPKYMI 414
DLPPPPLF D +NIIPQV L+ +L KF+G E M R+ +TRLP+++I
Sbjct: 326 TCDLPPPPLFTDEFRENIIPQVNLYQLLSKFNGSAEKEYKTYKANFMKRFEITRLPQFII 385
Query: 415 LHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKP 474
L+++RFTKN FF+EKNPT+VNFP+K+++ D + + ++ K +KY+L+ANIVHDG P
Sbjct: 386 LYIKRFTKNTFFLEKNPTIVNFPIKHVDFGDILGMRQRDKDVK-DTKYNLVANIVHDGDP 444
Query: 475 EGGFYRVFVQRKSEELW 491
+ G YR + K+ W
Sbjct: 445 KKGTYRAHILHKANGQW 461
>gi|301605952|ref|XP_002932588.1| PREDICTED: u4/U6.U5 tri-snRNP-associated protein 2-like [Xenopus
(Silurana) tropicalis]
Length = 501
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/440 (46%), Positives = 267/440 (60%), Gaps = 68/440 (15%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR VLDFDFEK CS+SLS++N YACLVCGKY+QGRG KSHAY HS++ HH
Sbjct: 39 RHCPYLDTINRSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHH 98
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL T K YCLPD Y I D SLEDI +V
Sbjct: 99 VFLNLHTLKFYCLPDNYNIIDSSLEDITYVLKPTFTKQQIGNLDKQAKLSRAYDGTTYLP 158
Query: 193 ---GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTR 242
GLNNIK D+ N +Q+L V PLRN+FL ENY K P LV RFG+L R
Sbjct: 159 GIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEENYCDIKRPPGDIMFLLVQRFGELMR 218
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTS 302
K+W+ RNFK VSPHE LQAV+ SKK F+I Q + V+F+SW LN L+S L KK +
Sbjct: 219 KLWNPRNFKAHVSPHEMLQAVVLCSKKNFQITKQGDGVDFLSWFLNALNSALGGNKKKKT 278
Query: 303 IIYECFQGELEV-VKEIP--------KNTISGNDQNTEKGSDGGDDHDNITTETSRMPFL 353
I+ + FQG + + K++P K + N++ EK + PF+
Sbjct: 279 IVTDVFQGSMRIFTKKLPHPDLPSEEKEQLMQNEEYQEKMLES--------------PFM 324
Query: 354 MLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE--VVRPHVARMRYRVTRLPK 411
L LDLP PL+KD E+ IIPQVPLF+IL KF+G T E + + + R+++T+LP
Sbjct: 325 YLTLDLPTAPLYKDEKEQLIIPQVPLFSILGKFNGITEKEYKTYKENFLK-RFQLTQLPP 383
Query: 412 YMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHD 471
++I ++RFTKNNFFVEKNPT+VNFP+ N++L++Y L ++ + YDLIAN+VHD
Sbjct: 384 FLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREY--LAEEFQSSHKNTTYDLIANVVHD 441
Query: 472 GKPEGGFYRVFVQRKSEELW 491
GKP G YR+ V W
Sbjct: 442 GKPNEGSYRIHVLHHGTGKW 461
>gi|158296728|ref|XP_317070.4| AGAP008381-PA [Anopheles gambiae str. PEST]
gi|157014851|gb|EAA12281.4| AGAP008381-PA [Anopheles gambiae str. PEST]
Length = 501
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/447 (44%), Positives = 281/447 (62%), Gaps = 58/447 (12%)
Query: 92 QGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSH 151
Q ++ + + + CPYLDT+NR +LDFDFEK CSVSL+ +NVYACLVCGKY+QGRG +H
Sbjct: 32 QRRKQTVTDRSKQCPYLDTINRHLLDFDFEKLCSVSLTRINVYACLVCGKYFQGRGTNTH 91
Query: 152 AYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------- 192
AYTHS+ HHV++NL T K YCLPD YEI D SL+DI++V
Sbjct: 92 AYTHSVAESHHVFLNLSTLKFYCLPDNYEIIDSSLDDIKYVLDPVFTVRDIRSLDREDVK 151
Query: 193 ---------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP----- 232
GLNNIK D+ NV +Q+L V P+R+FFL+ +NY + K P
Sbjct: 152 QSRTVDGTFYHPGVVGLNNIKANDYCNVILQALSHVKPIRDFFLMEKNYANIKRPPGDTA 211
Query: 233 --LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL 290
LV RFG+L RK+W+ RNFK VSPHE LQAV+ S K+F+I Q +P+EF+SW L++L
Sbjct: 212 FTLVQRFGELLRKLWNPRNFKAHVSPHEMLQAVVLWSSKQFQITKQGDPIEFLSWFLHSL 271
Query: 291 HSDLRNTKK-NTSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETS 348
H LR K+ ++S+I F GE+++ +++P + + +D + + + T T
Sbjct: 272 HKQLRGNKQPDSSVINRSFLGEMKIYTRKLPPTELDDVQKQLLLATD--EYQEKVETST- 328
Query: 349 RMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD--GETVTEVVRPHVARMRYRV 406
FL L DLP PLF D + +NIIPQV L+ +L KF+ E + + + + R+ +
Sbjct: 329 ---FLYLTCDLPATPLFIDELRENIIPQVNLYQLLAKFNSISEKEYKTYKDNFLK-RFEI 384
Query: 407 TRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLR--SKYDL 464
TRLPKY+IL+++RFTKN FF+EKNPT+VNFPVKN++ D + ++N+K +KY+L
Sbjct: 385 TRLPKYVILYIKRFTKNTFFLEKNPTIVNFPVKNVDFGDIL----TEDNKKTHRYTKYNL 440
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
+ANIVHDG+P G YR + +KS W
Sbjct: 441 VANIVHDGEPNSGTYRCHILQKSTNQW 467
>gi|198469718|ref|XP_002134392.1| GA23380 [Drosophila pseudoobscura pseudoobscura]
gi|198147002|gb|EDY73019.1| GA23380 [Drosophila pseudoobscura pseudoobscura]
Length = 494
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/433 (45%), Positives = 270/433 (62%), Gaps = 51/433 (11%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR +LDFDFEK CSVSL+ +NVYACLVCGKY+QGRG +HAYTHS+ HH
Sbjct: 36 RVCPYLDTINRNLLDFDFEKLCSVSLTRINVYACLVCGKYFQGRGTNTHAYTHSVGEAHH 95
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL T + YCLPD YEI D SL+DI++V
Sbjct: 96 VFLNLHTLRFYCLPDNYEIIDSSLDDIKYVLNPTFTKQEISKLDFVLPKQSRTVDGILYL 155
Query: 193 ----GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLT 241
GLNNIK D+ NV + +L V PLR++FL ++Y K P LV RFG+L
Sbjct: 156 PGVVGLNNIKANDYCNVVLHALSHVGPLRDYFLREQSYAKIKRPPGDSMFTLVQRFGELM 215
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-N 300
RK+W+ RNFK VSPHE LQAV+ S KRF+I Q +P++F+SW LNTLH L+ K+ N
Sbjct: 216 RKMWNPRNFKAHVSPHEMLQAVVLWSSKRFQITEQGDPIDFLSWFLNTLHRALKGNKQPN 275
Query: 301 TSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDL 359
+SI+Y F GE+++ +++P + +D EK + D + F+ L DL
Sbjct: 276 SSILYNIFLGEMQIFTRKMPP--VELDDAAKEKLLATEEYQDQV----EHTNFIYLTCDL 329
Query: 360 PPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARM-RYRVTRLPKYMILHMR 418
PPPPLF D +NIIPQV L+ +L KF+G E M R+ +TRLP+++IL+++
Sbjct: 330 PPPPLFTDEFRENIIPQVNLYQLLGKFNGSAEKEYKTYKDNFMKRFEITRLPQFIILYIK 389
Query: 419 RFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGF 478
RFTKN FF+EKNPT+VNFP+KN++ D + + ++ K +KY+L+ANIVHDG P+ G
Sbjct: 390 RFTKNTFFLEKNPTIVNFPIKNVDFGDILGMRQRDKDVK-DTKYNLVANIVHDGDPKKGT 448
Query: 479 YRVFVQRKSEELW 491
YR + K+ W
Sbjct: 449 YRAHILHKANGQW 461
>gi|221043956|dbj|BAH13655.1| unnamed protein product [Homo sapiens]
Length = 487
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/433 (47%), Positives = 270/433 (62%), Gaps = 53/433 (12%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR VLDFDFEK CS+SLS++N YACLVCGKY+QGRG KSHAY HS++ HH
Sbjct: 25 RHCPYLDTINRSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHH 84
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL T K YCLPD YEI D SLEDI +V
Sbjct: 85 VFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLP 144
Query: 193 ---GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTR 242
GLNNIK D+ N +Q+L V PLRN+FL +NY++ K P LV RFG+L R
Sbjct: 145 GIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMR 204
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNT 301
K+W+ RNFK VSPHE LQAV+ SKK F+I Q + V+F+SW LN HS L KK
Sbjct: 205 KLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNAPHSALGGTKKKKK 264
Query: 302 SIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLP 360
+I+ + FQG + + K++P + ++ + D++ E++ F+ L LDLP
Sbjct: 265 TIVTDVFQGSMRIFTKKLPHPDLPAEEK---EQLLHNDEYQETMVEST---FMYLTLDLP 318
Query: 361 PPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE--VVRPHVARMRYRVTRLPKYMILHMR 418
PL+KD E+ IIPQVPLFNIL KF+G T E + + + R+++T+LP Y+I ++
Sbjct: 319 TAPLYKDEKEQLIIPQVPLFNILAKFNGITEKEYKTYKENFLK-RFQLTKLPPYLIFCIK 377
Query: 419 RFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGF 478
RFTKNNFFVEKNPT+VNFP+ N++L++Y+ ++ + YDLIANIVHDGKP G
Sbjct: 378 RFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQAVHK--NTTYDLIANIVHDGKPSEGS 435
Query: 479 YRVFVQRKSEELW 491
YR+ V W
Sbjct: 436 YRIHVLHHGTGKW 448
>gi|339239199|ref|XP_003381154.1| u4/U6.U5 tri-snRNP-associated protein 2 [Trichinella spiralis]
gi|316975834|gb|EFV59230.1| u4/U6.U5 tri-snRNP-associated protein 2 [Trichinella spiralis]
Length = 538
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/442 (45%), Positives = 278/442 (62%), Gaps = 61/442 (13%)
Query: 99 VEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLE 158
+ + R CPYLD++NRQVLDFDFEK CSVSLS+LNVYACLVCGKY+QGRG +HAYTHS++
Sbjct: 64 LNLSRSCPYLDSINRQVLDFDFEKLCSVSLSHLNVYACLVCGKYFQGRGNNTHAYTHSVD 123
Query: 159 AGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV-------------------------- 192
GH V++NL+T + YCLPD YEI D SL+DI++V
Sbjct: 124 IGHRVFLNLQTLRFYCLPDNYEIIDSSLDDIKYVLKPTYSPEHISTLSSNTKLSRAFDGT 183
Query: 193 -------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFG 238
GLN IK D++NV +Q+L V PLR++FL +NY++ K P L RFG
Sbjct: 184 TYYPGMVGLNIIKANDYMNVILQALAHVPPLRDYFLCEDNYKNVKRPPGDKMVLLYQRFG 243
Query: 239 DLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK 298
+L RK+W+ RNFK VSPHE LQAV+ S KRF+I Q + ++ +SWLLN LH L T
Sbjct: 244 ELIRKMWNPRNFKAHVSPHEMLQAVVLCSNKRFQITEQGDAIDVLSWLLNALHVSLNGTN 303
Query: 299 K-NTSIIYECFQGELEVVKE--IPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLML 355
+ ++SIIY F+G++ K +P + N++ + + + + +PFL L
Sbjct: 304 RTDSSIIYRTFRGKMRTFKRQVLP---VDANEEERTRLLLTEEYQERV----QNLPFLFL 356
Query: 356 GLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARM-RYRVTRLPKYMI 414
LDLPP PL++D +NIIPQVPL +L KF+G T E + M R+ +T LP Y+I
Sbjct: 357 TLDLPPAPLYRDEFFQNIIPQVPLAALLAKFNGITEKEYKTYNENIMKRFEITHLPPYLI 416
Query: 415 LHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLR---SKYDLIANIVHD 471
+ ++RFTKN+F+VEKNPT+VNFP++N++L DY+ E+ K R + YD+IANIVHD
Sbjct: 417 MFVKRFTKNHFYVEKNPTIVNFPIRNVDLYDYL-----SEDGKKRHPYTTYDMIANIVHD 471
Query: 472 GKPE--GGFYRVFVQRKSEELW 491
GKP+ G YR+ + K W
Sbjct: 472 GKPDPGEGSYRIQLVHKGTGKW 493
>gi|403357602|gb|EJY78428.1| U4/U6.U5 tri-snRNP-associated protein 2 [Oxytricha trifallax]
Length = 559
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/454 (43%), Positives = 275/454 (60%), Gaps = 61/454 (13%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHS 156
+L ++DCPYL + R +LDFD EK CSV+LSNLN+Y+CL CGKYYQG+G+ + AY HS
Sbjct: 45 QLKRSKKDCPYLGQIKRHMLDFDLEKQCSVTLSNLNIYSCLTCGKYYQGKGKTTQAYIHS 104
Query: 157 LEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH------------------------- 191
LE H+V+INL+ KV+CLPD YE++D +L DI++
Sbjct: 105 LEQQHNVFINLQDSKVWCLPDNYEVDDAALNDIKYNLIPLYNQQLVDKLDSEPMIARALD 164
Query: 192 --------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI----PENYRHC--KSPLVHRF 237
+GLNN+K+TDFVNV IQSL RV PLR++ L EN K LV +F
Sbjct: 165 GTQFYPGSLGLNNLKQTDFVNVIIQSLCRVKPLRDYCLFYNIHSENLSMADQKHLLVVKF 224
Query: 238 GDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT 297
+L +KIW+ +NFKG VSPHE LQA+ AS+KRF+IG Q +P++ +SWLLNT + DL +
Sbjct: 225 AELIKKIWNPKNFKGHVSPHELLQAISLASQKRFKIGEQKDPIQLLSWLLNTFNEDLHSQ 284
Query: 298 KKN-----TSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHD-NITTETSRMP 351
+K ++I + FQGELE+ IPK N N S D D + +
Sbjct: 285 QKQKKLKGLNMIEKTFQGELEISSLIPKGKQDANFLNKLAVSKTNMDTDVQYEMKNQKTK 344
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVA-RMRYRVTRLP 410
F L LDLP PLFK+ + IPQ+ L +LKK+DG++ E P A + ++R+ LP
Sbjct: 345 FFFLALDLPTIPLFKEQNQLAAIPQIALMQLLKKYDGKSFIE--EPVTAIKKKFRILSLP 402
Query: 411 KYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENE-------------K 457
KY+I+H++RF KN++F EKNPT+VNFP+KNL+L +Y+ P ++++ K
Sbjct: 403 KYLIIHVKRFNKNDYFTEKNPTIVNFPIKNLDLSEYLWSPIAQQHQNDGSNTLNDAQPTK 462
Query: 458 LRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
KYDLIANI+H+GK + G YRV + K + W
Sbjct: 463 ETYKYDLIANIIHEGKHDNGQYRVQIHHKPTDEW 496
>gi|18859907|ref|NP_573334.1| CG7288 [Drosophila melanogaster]
gi|16769542|gb|AAL28990.1| LD38070p [Drosophila melanogaster]
gi|22832531|gb|AAF48897.2| CG7288 [Drosophila melanogaster]
gi|220946848|gb|ACL85967.1| CG7288-PA [synthetic construct]
Length = 494
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/437 (45%), Positives = 270/437 (61%), Gaps = 59/437 (13%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR +LDFDFEK CS+SL+ +NVYACLVCGKY+QGRG +HAYTHS+ HH
Sbjct: 36 RVCPYLDTINRNLLDFDFEKLCSISLTRINVYACLVCGKYFQGRGTNTHAYTHSVGEAHH 95
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL T + YCLPD YEI D SL+DI++V
Sbjct: 96 VFLNLHTLRFYCLPDNYEIIDSSLDDIKYVLNPTFTRQEISKLDQLQPKHSRTVDGVLYL 155
Query: 193 ----GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLT 241
GLNNIK D+ NV + +L V PLR++FL ++Y H P LV RFG+L
Sbjct: 156 PGVVGLNNIKANDYCNVVLHALSHVGPLRDYFLQKQSYAHVVRPPGDSVFTLVQRFGELM 215
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-N 300
RK+W+ RNFK VSPHE LQAV+ S KRF+I Q +P++F+SW LNTLH L+ K N
Sbjct: 216 RKMWNPRNFKSHVSPHEMLQAVVLWSSKRFQITEQGDPIDFLSWFLNTLHRALKGNKHPN 275
Query: 301 TSIIYECFQGELEV-VKEIP----KNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLML 355
+SI+Y+ F GE+++ +++P + TE+ D +D + F+ L
Sbjct: 276 SSILYKIFLGEMKIYTRKMPPVELDDAAKAQLLATEEYKDQVEDKN----------FIYL 325
Query: 356 GLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARM-RYRVTRLPKYMI 414
DLPPPPLF D +NIIPQV L+ +L KF+G E M R+ +TRLP+++I
Sbjct: 326 TCDLPPPPLFTDEFRENIIPQVNLYQLLSKFNGTAEKEYKTYKANFMKRFEITRLPQFII 385
Query: 415 LHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKP 474
L+++RFTKN FF+EKNPT+VNFP+K+++ D + + ++ K +KY+L+ANIVHDG P
Sbjct: 386 LYIKRFTKNTFFLEKNPTIVNFPIKHVDFGDILGMRQRDKDVK-DTKYNLVANIVHDGDP 444
Query: 475 EGGFYRVFVQRKSEELW 491
+ G YR + K+ W
Sbjct: 445 KKGTYRAHILHKANGQW 461
>gi|146186096|ref|XP_001470681.1| ubiquitin specific protease 39 and snrnp assembly factor
[Tetrahymena thermophila]
gi|146143168|gb|EDK31265.1| ubiquitin specific protease 39 and snrnp assembly factor
[Tetrahymena thermophila SB210]
Length = 529
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/484 (41%), Positives = 287/484 (59%), Gaps = 76/484 (15%)
Query: 47 DDDDEEEEYGGRGDSGAKVGQNG-RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDC 105
DD+ +++E G +++ ++ T + DE+++E+ + N ++R++C
Sbjct: 52 DDNTKQQELGNDEILDSQLVKDAYNTQNEHDEEQNEEIQEKKN-----------DIRKEC 100
Query: 106 PYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYI 165
P++ T+ R +LDFDFEK CS+SL+NLNVYACL+CGKYYQGRG+ +HAY HSLE HH+YI
Sbjct: 101 PFIITIKRHLLDFDFEKLCSISLANLNVYACLICGKYYQGRGRNTHAYLHSLETNHHMYI 160
Query: 166 NLRTEKVYCLPDGYEINDPSLEDIRH---------------------------------V 192
NL KVYCLPD YE+ D SL DI++ V
Sbjct: 161 NLHNAKVYCLPDNYEVIDQSLNDIKYNLAPVYSDQQLANLDTMDTKSRALNGIYYQPGFV 220
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFL-----IPENYRHCKSPLVHRFGDLTRKIWHA 247
GLNNIK D+VNV IQ+L R+ LRN + + ++ K+ + RF +L +KIW+
Sbjct: 221 GLNNIKMNDYVNVIIQALCRIPVLRNQIIRFNNTVNQDVFDLKTLISKRFSNLVKKIWNP 280
Query: 248 RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYEC 307
RNFKGQVSPHE LQA++ SKK+F I QS+P++ +SWLLN + S+L NT ++I EC
Sbjct: 281 RNFKGQVSPHELLQAIVLKSKKKFTINEQSDPIKLLSWLLNNIQSELSNTNY-KNLIDEC 339
Query: 308 FQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKD 367
F+GE+E+ P G E PF+ L L++PPPPL KD
Sbjct: 340 FKGEVEIHTYTPLQNQIGYSS---------------VPEIENKPFIYLTLNIPPPPLHKD 384
Query: 368 VMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFV 427
+K IP+ PLFN+LKKFDG T + + R YR+ +LPKY+ILHM RFT N +++
Sbjct: 385 DHKKINIPEQPLFNLLKKFDGITTHDNPK---YRKTYRIKKLPKYLILHMERFTFNKYYL 441
Query: 428 EKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKS 487
EKNPT+V FP+ NL+LK YI E + LR Y+L+ NI H+G + G Y++ V+ K+
Sbjct: 442 EKNPTIVRFPLNNLDLKGYI-----DEGKSLR--YNLLVNICHEGTAKAGTYKIHVRNKA 494
Query: 488 EELW 491
W
Sbjct: 495 NNTW 498
>gi|449541552|gb|EMD32535.1| spindle pole body protein [Ceriporiopsis subvermispora B]
Length = 544
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/478 (43%), Positives = 282/478 (58%), Gaps = 69/478 (14%)
Query: 45 TYDDDDEEEEYGGRGDSGAKVGQNGRTGEDDDEDKDED-----------EDDLANGYGQG 93
T DDD + R D V + R E + +K + ED++A+ +
Sbjct: 6 TRDDDSDRPAKRARVDDQTIVSSSPRVEEKYEANKSKSILMDKNLDSLSEDEMAD---ET 62
Query: 94 QRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAY 153
Q S R YLDT+NR VLDFDFEK CSVSLSN+N+Y CLVCGKY+QGRG+ S+AY
Sbjct: 63 QESGPEPARASDLYLDTINRAVLDFDFEKVCSVSLSNINIYGCLVCGKYFQGRGRSSYAY 122
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIR----------------------- 190
HS+ HHV+INL T KVY LPDGY ++DPSLEDI
Sbjct: 123 AHSIHDDHHVFINLETTKVYVLPDGYAVSDPSLEDISFVLAPSFSQTQIQNLSKPAFALK 182
Query: 191 -------------HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRF 237
++GLNNIK DF+NV I SL+ VTPLR+ L+ +YR +S L+ RF
Sbjct: 183 PSYDLQSKPYIPGYIGLNNIKRNDFMNVVIHSLLHVTPLRDHLLL-SDYRGKESELLRRF 241
Query: 238 GDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT 297
L +K+W+ R FK QVSPHEFLQ V++AS +F + Q +PVEF+SWLLN LH D+ +
Sbjct: 242 AGLAKKVWNPRLFKSQVSPHEFLQEVVRASAGKFSLEKQGDPVEFLSWLLNHLHKDMGGS 301
Query: 298 KK-NTSIIYECFQGE--LEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLM 354
K+ N+SIIY FQG+ +E + + + I+GN++ D I + S PFL
Sbjct: 302 KRQNSSIIYSTFQGQVRMEAQQVLVRPDIAGNEKPR------FDIDREIKSTVS--PFLF 353
Query: 355 LGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMI 414
L +DLPPPPLF+D +EKNIIPQV + ++L K+DG+ E R++ RLP+Y+I
Sbjct: 354 LAVDLPPPPLFQDSVEKNIIPQVSIHSVLAKYDGKVTKESAG---QLQRFKCQRLPQYII 410
Query: 415 LHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG 472
LH +RFT+N F EKNPT+VNFP++ L+ ++Y+ P + YDLIAN+ H+
Sbjct: 411 LHFKRFTRNMFVEEKNPTIVNFPLRGLDFREYLDAPAGHPP----AVYDLIANVTHES 464
>gi|428184928|gb|EKX53782.1| hypothetical protein GUITHDRAFT_100752 [Guillardia theta CCMP2712]
Length = 571
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/412 (48%), Positives = 268/412 (65%), Gaps = 52/412 (12%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGH 161
+R CPYLD++NR +LDFDFEK CS+S S+LNVY CLVCGKY+QGR + S Y HSLE H
Sbjct: 79 QRFCPYLDSINRHILDFDFEKVCSISNSHLNVYVCLVCGKYFQGRARGSPVYFHSLEHNH 138
Query: 162 HVYINLRTEKVYCLPDGYEINDPSLEDIRH------------------------------ 191
HV++ L + +VYC+PD YE+ D SL DI+H
Sbjct: 139 HVFMKLESGRVYCIPDNYEVLDSSLADIKHNLNPTYTSEHVKSLDIDVKYSRGIDGTEFI 198
Query: 192 ---VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHAR 248
VGLNN+K T ++NV IQ+L VT LRNFFL+PENY+H KSPLV RFG+L RK+W+
Sbjct: 199 PGTVGLNNLKNTAYLNVIIQALSCVTELRNFFLLPENYKHFKSPLVQRFGELLRKMWNPS 258
Query: 249 NFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT-KKNTSIIYEC 307
FKGQVSPHE QA+ S +++R V S+P EF++W LN+LH L + K+N+S+I++
Sbjct: 259 AFKGQVSPHELFQAISVESNRKYRSDVHSDPAEFLNWFLNSLHRGLGGSNKRNSSVIHKV 318
Query: 308 FQGEL---EVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPL 364
FQG + EV E K I D+N D DD + +T+ PFL L LDLPP PL
Sbjct: 319 FQGLVRFQEVRVESKKAKIKKADENERMVMDDMDDDEPWDVQTT--PFLQLTLDLPPTPL 376
Query: 365 FKDVMEKNIIPQVPLFNILKKFDG---ETVTEVVRPHVARMRYRVTRLPKYMILHMRRFT 421
+ D +KNIIPQVPL IL KFDG + V V++ R+R+ LP+Y+IL+++RF
Sbjct: 377 YADERDKNIIPQVPLLTILHKFDGVYEQNVRGVLK------RFRLLELPRYLILNIKRFN 430
Query: 422 KNNFF-VEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG 472
N F +EKNPT+V+FP+KNL+L+++I +P E + + ++YDL+ANI H+G
Sbjct: 431 MNTQFEMEKNPTIVSFPIKNLDLREFIDIP---EGQNVVTRYDLVANICHEG 479
>gi|391344446|ref|XP_003746510.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like isoform 1
[Metaseiulus occidentalis]
Length = 505
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/432 (45%), Positives = 267/432 (61%), Gaps = 53/432 (12%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR VLDFDFEK CSVSLS +NVYACLVCGKY+QGRG +HAYTHS+ GHH
Sbjct: 19 RTCPYLDTINRNVLDFDFEKLCSVSLSRINVYACLVCGKYFQGRGPSTHAYTHSVHVGHH 78
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL + + +CLPD Y I D SLEDI V
Sbjct: 79 VFLNLESLEFFCLPDNYRIVDSSLEDILFVLQPRFSAEDIKALDKNEKLSIALDGTKYLP 138
Query: 193 ---GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTR 242
GLNNIK D+ NV +Q+L V PLR+F + ENY+ K P +V RFG+L R
Sbjct: 139 GVIGLNNIKANDYCNVILQALSVVVPLRDFMIRDENYKDIKRPPGDTMFLIVQRFGELLR 198
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKN-T 301
K+W+ R+FK VSPHE LQAV+ SKKRF+I Q +P++F+SW LN+LH L T K+ +
Sbjct: 199 KLWNPRHFKAHVSPHEMLQAVVLCSKKRFQITAQGDPIDFVSWFLNSLHIALNGTNKDSS 258
Query: 302 SIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPP 361
SIIY+ F+G + V K + ++ K D + + + +MPF+ L +DLP
Sbjct: 259 SIIYKTFRGRMRVYT---KKLFPTDPEHQPKTYDPSEYEEKM----EKMPFMYLTVDLPS 311
Query: 362 PPLFKDVMEKNIIPQVPLFNILKKFDG--ETVTEVVRPHVARMRYRVTRLPKYMILHMRR 419
PLFKD ++NIIPQVPL I+ KF+G E + + ++ + R+ + +LP Y+IL+M+R
Sbjct: 312 QPLFKDDQQENIIPQVPLNVIMAKFNGIQEKEYKTYKDNLLK-RFELIKLPMYLILYMKR 370
Query: 420 FTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFY 479
FTKN FF EKNPT++NFP+ N++ D + + N + + Y+L+ANIVH+G+P G Y
Sbjct: 371 FTKNTFFTEKNPTIINFPINNVDFSDLLSPELRRVNPE--NAYELVANIVHEGEPNKGTY 428
Query: 480 RVFVQRKSEELW 491
R V + W
Sbjct: 429 RCHVLHRGTGKW 440
>gi|299756400|ref|XP_001829307.2| ubiquitin C-terminal hydrolase Ubp10 [Coprinopsis cinerea
okayama7#130]
gi|298411659|gb|EAU92267.2| ubiquitin C-terminal hydrolase Ubp10 [Coprinopsis cinerea
okayama7#130]
Length = 560
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/467 (45%), Positives = 276/467 (59%), Gaps = 62/467 (13%)
Query: 50 DEEEEYGGRGDSGAKVGQNGRTGEDDDED--------KDEDEDDLANGYGQGQRSRLVEV 101
D + G GD+ + + R D +D + DEDD G + ++
Sbjct: 10 DIQSRESGEGDNAERPAKRARMDLDQPKDSKDRADSPQSSDEDDETLGQTLPPAT---DL 66
Query: 102 RRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGH 161
R YLDT+NRQ LDFDFEK CSVSLSN+N+Y CLVCGKY+QGRG+ S+AY HS+ H
Sbjct: 67 RSSDLYLDTINRQALDFDFEKLCSVSLSNINIYGCLVCGKYFQGRGRNSYAYAHSIHEDH 126
Query: 162 HVYINLRTEKVYCLPDGYEINDPSLEDIRHV----------------------------- 192
HV+INL T KVY LPDGY ++DPSLEDI V
Sbjct: 127 HVFINLETTKVYVLPDGYHVSDPSLEDISFVLAPKFTPESIKAISTGLYLTKPSYDLSHK 186
Query: 193 -------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIW 245
GLNNIK D +NV I +L+ V PLR+ L+ +Y+ + L+ RF L +K+W
Sbjct: 187 PYLQGFVGLNNIKRNDHMNVIIHALLHVPPLRDSLLL-SDYKGKEPELLKRFAGLAKKVW 245
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT-KKNTSII 304
+ R FK QVSPHEFLQ V +AS +FR+ Q +PVEF+ WLLN LH DL T KK +SII
Sbjct: 246 NPRLFKSQVSPHEFLQEVNRASGGKFRLEEQGDPVEFLGWLLNHLHKDLGGTKKKGSSII 305
Query: 305 YECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPL 364
++ FQGEL V E + + + EK D +I T S PFL L +DLPPPPL
Sbjct: 306 FKTFQGELRV--ETQQVVVRPDAGENEKPR--FDIDRDIKTTVS--PFLFLAVDLPPPPL 359
Query: 365 FKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNN 424
F+D +EKNIIPQV ++++L K+DG T E H+ RY+ +LP Y+ILH +RFTKN
Sbjct: 360 FQDAVEKNIIPQVNIYSVLAKYDGRTTQESAG-HL--RRYKCQKLPPYIILHFKRFTKNL 416
Query: 425 FFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHD 471
F EKNPT+VNFP++ L+ K+YI P E+ + YDLIAN+ H+
Sbjct: 417 FVEEKNPTIVNFPLRGLDFKEYIDAPPSNES----TLYDLIANVTHE 459
>gi|391344448|ref|XP_003746511.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like isoform 2
[Metaseiulus occidentalis]
Length = 492
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/434 (45%), Positives = 268/434 (61%), Gaps = 53/434 (12%)
Query: 101 VRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAG 160
+ R CPYLDT+NR VLDFDFEK CSVSLS +NVYACLVCGKY+QGRG +HAYTHS+ G
Sbjct: 4 MHRTCPYLDTINRNVLDFDFEKLCSVSLSRINVYACLVCGKYFQGRGPSTHAYTHSVHVG 63
Query: 161 HHVYINLRTEKVYCLPDGYEINDPSLEDIRHV---------------------------- 192
HHV++NL + + +CLPD Y I D SLEDI V
Sbjct: 64 HHVFLNLESLEFFCLPDNYRIVDSSLEDILFVLQPRFSAEDIKALDKNEKLSIALDGTKY 123
Query: 193 -----GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDL 240
GLNNIK D+ NV +Q+L V PLR+F + ENY+ K P +V RFG+L
Sbjct: 124 LPGVIGLNNIKANDYCNVILQALSVVVPLRDFMIRDENYKDIKRPPGDTMFLIVQRFGEL 183
Query: 241 TRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKN 300
RK+W+ R+FK VSPHE LQAV+ SKKRF+I Q +P++F+SW LN+LH L T K+
Sbjct: 184 LRKLWNPRHFKAHVSPHEMLQAVVLCSKKRFQITAQGDPIDFVSWFLNSLHIALNGTNKD 243
Query: 301 -TSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDL 359
+SIIY+ F+G + V K + ++ K D + + + +MPF+ L +DL
Sbjct: 244 SSSIIYKTFRGRMRVYT---KKLFPTDPEHQPKTYDPSEYEEKM----EKMPFMYLTVDL 296
Query: 360 PPPPLFKDVMEKNIIPQVPLFNILKKFDG--ETVTEVVRPHVARMRYRVTRLPKYMILHM 417
P PLFKD ++NIIPQVPL I+ KF+G E + + ++ + R+ + +LP Y+IL+M
Sbjct: 297 PSQPLFKDDQQENIIPQVPLNVIMAKFNGIQEKEYKTYKDNLLK-RFELIKLPMYLILYM 355
Query: 418 RRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGG 477
+RFTKN FF EKNPT++NFP+ N++ D + + N + + Y+L+ANIVH+G+P G
Sbjct: 356 KRFTKNTFFTEKNPTIINFPINNVDFSDLLSPELRRVNPE--NAYELVANIVHEGEPNKG 413
Query: 478 FYRVFVQRKSEELW 491
YR V + W
Sbjct: 414 TYRCHVLHRGTGKW 427
>gi|355751467|gb|EHH55722.1| hypothetical protein EGM_04981 [Macaca fascicularis]
Length = 563
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 205/433 (47%), Positives = 270/433 (62%), Gaps = 55/433 (12%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+ R VLDFDFEK CS+SLS++N YACLVCGKY+QGRG KSHAY HS++ HH
Sbjct: 103 RHCPYLDTI-RSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHH 161
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL T K YCLPD YEI D SLEDI +V
Sbjct: 162 VFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLP 221
Query: 193 ---GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTR 242
GLNNIK D+ N +Q+L V PLRN+FL +NY++ K P LV RFG+L R
Sbjct: 222 GIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMR 281
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNT 301
K+W+ RNFK VSPHE LQAV+ SKK F+I Q + V+F+SW LN LHS L KK
Sbjct: 282 KLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKK 341
Query: 302 SIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLP 360
+I+ + FQG + + K++P + ++ + D++ E++ F+ L LDLP
Sbjct: 342 TIVTDVFQGSMRIFTKKLPHPDLPAEEKEQLLHN---DEYQETMVEST---FMYLTLDLP 395
Query: 361 PPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE--VVRPHVARMRYRVTRLPKYMILHMR 418
PL+KD E+ IIPQVPLFNIL KF+G T E + + + R+++T+LP Y+I ++
Sbjct: 396 TAPLYKDEKEQLIIPQVPLFNILAKFNGITEKEYKTYKENFLK-RFQLTKLPPYLIFCIK 454
Query: 419 RFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGF 478
RFTKNNFFVEKNPT+VNFP+ N++L++Y+ ++ + YDLIANIVHDGKP G
Sbjct: 455 RFTKNNFFVEKNPTIVNFPI-NVDLREYLSEEVQAVHKN--TTYDLIANIVHDGKPSEGS 511
Query: 479 YRVFVQRKSEELW 491
YR+ V W
Sbjct: 512 YRIHVLHHGTGKW 524
>gi|384497015|gb|EIE87506.1| hypothetical protein RO3G_12217 [Rhizopus delemar RA 99-880]
Length = 391
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/397 (50%), Positives = 261/397 (65%), Gaps = 55/397 (13%)
Query: 92 QGQRSRL----VEVRRDCP----YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYY 143
Q +R+RL V++D YLDT++R +LDFDFEK CSVSLS+LNVYACL CGKYY
Sbjct: 5 QAKRARLNSPTKNVKKDKETTDLYLDTIDRHMLDFDFEKVCSVSLSHLNVYACLTCGKYY 64
Query: 144 QGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV----------- 192
QGRG+ SHAY HS++ HHV+INL T KVY LPDGYE++DPSL DI++V
Sbjct: 65 QGRGKSSHAYFHSIDKDHHVFINLSTLKVYVLPDGYEVDDPSLNDIKYVLNPILTKKQVE 124
Query: 193 ----------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCK 230
GLNNIK D+VNV IQ+L + P+R++F++ +
Sbjct: 125 ELDKTLKTSYDLNNKKYFPGFVGLNNIKANDYVNVIIQALAHIPPIRDYFILQDFEAKGS 184
Query: 231 SPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL 290
S LV RF L RKIW+ R FKGQVSPHE +Q + AS+KRF++ QSN ++F+SW LNTL
Sbjct: 185 SQLVCRFSALVRKIWNPRAFKGQVSPHELVQEISNASRKRFKLTEQSNAIDFLSWFLNTL 244
Query: 291 HSDLRNT-KKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGG-DDHDNITTETS 348
H DL T KKN+SIIY+ FQGE++V + P TEK + + + ITT TS
Sbjct: 245 HKDLGGTKKKNSSIIYQYFQGEVKVESQEP-------GLPTEKDALAKFNPNRAITTTTS 297
Query: 349 RMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTR 408
PFL L LDLPP PL++D E++I+PQVPL IL KFDG+ V EV RY +TR
Sbjct: 298 --PFLFLALDLPPVPLYQDERERDIVPQVPLTTILSKFDGKRVQEVSN---QLKRYSITR 352
Query: 409 LPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKD 445
LP+++ILH++RFTKN++ EKNPT+VNFP+KN+++ +
Sbjct: 353 LPQFLILHIKRFTKNSWTNEKNPTIVNFPIKNIDMSN 389
>gi|336389959|gb|EGO31102.1| hypothetical protein SERLADRAFT_444682 [Serpula lacrymans var.
lacrymans S7.9]
Length = 543
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/467 (44%), Positives = 279/467 (59%), Gaps = 76/467 (16%)
Query: 63 AKVGQNGR--------TGEDDDEDK-----------DEDEDDLANGYGQGQRSRLVEVRR 103
KVG++GR T DD+ + ++D DD GY Q + E +
Sbjct: 21 VKVGEDGRFNGTSSTQTAPPDDQLEGGMEKNMQTFVEDDYDDEIEGYEQSKN----EPKA 76
Query: 104 DCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHV 163
YLDT+NR +LDFDFEK CSVSLSN+N Y CLVCGKY+QGRG+KS+AY HS+ HHV
Sbjct: 77 SDLYLDTINRALLDFDFEKVCSVSLSNINTYGCLVCGKYFQGRGRKSYAYAHSIHDDHHV 136
Query: 164 YINLRTEKVYCLPDGYEINDPSLEDIR--------------------------------- 190
+INL T KV+ LPDGY ++DPSLEDI
Sbjct: 137 FINLETTKVHVLPDGYPVSDPSLEDISFVLAPSFTRSSISSLSSSSHLLKPSYDLSSKPY 196
Query: 191 ---HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA 247
++GLNNIK D +NV I SL+ + PLR++ L+ N+R +S LV RF L +K+W+
Sbjct: 197 LPGYIGLNNIKRNDHMNVIIHSLLHIPPLRDYLLL-SNFRGKESELVKRFATLAKKVWNP 255
Query: 248 RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT-KKNTSIIYE 306
R FK QVSPHEFLQ V +AS +FR+ Q +PVEF+ WLLN LH D T KKN+S+I+
Sbjct: 256 RLFKSQVSPHEFLQEVNRASTGKFRLEQQGDPVEFLGWLLNRLHKDTGGTKKKNSSVIFS 315
Query: 307 CFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLF 365
FQGEL V +++ +G +N + D D + T+ PFL L +DLPPPPLF
Sbjct: 316 TFQGELRVETQQVLVRPDAG--ENEKPRFDIARDSKSTTS-----PFLFLAVDLPPPPLF 368
Query: 366 KDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNF 425
+D +EKNIIPQV + ++L K+DG+T E RY+ RLP+Y+ILH +RFTKN F
Sbjct: 369 QDSVEKNIIPQVSIHSVLAKYDGKTTQESAG---QLRRYKCQRLPEYIILHFKRFTKNAF 425
Query: 426 FVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG 472
EKNPT+VNFP++ ++ +DY+ P P + YDLIAN+ H+
Sbjct: 426 VEEKNPTIVNFPLRGVDFRDYLDAP-PSHPPTV---YDLIANVTHES 468
>gi|426336270|ref|XP_004029623.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Gorilla gorilla
gorilla]
Length = 516
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 205/433 (47%), Positives = 272/433 (62%), Gaps = 40/433 (9%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREVDEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTR 242
T+ +L V PLRN+FL +NY++ K P LV RFG+L R
Sbjct: 190 ----------------TVCALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMR 233
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNT 301
K+W+ RNFK VSPHE LQAV+ SKK F+I Q + V+F+SW LN LHS L KK
Sbjct: 234 KLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKK 293
Query: 302 SIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLP 360
+I+ + FQG + + K++P + ++ + D++ E++ F+ L LDLP
Sbjct: 294 TIVTDVFQGSMRIFTKKLPHPDLPAEEKEQLLHN---DEYQETMVEST---FMYLTLDLP 347
Query: 361 PPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE--VVRPHVARMRYRVTRLPKYMILHMR 418
PL+KD E+ IIPQVPLFNIL KF+G T E + + + R+++T+LP Y+I ++
Sbjct: 348 TAPLYKDEKEQLIIPQVPLFNILAKFNGITEKEYKTYKENFLK-RFQLTKLPPYLIFCIK 406
Query: 419 RFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGF 478
RFTKNNFFVEKNPT+VNFP+ N++L++Y+ ++ + YDLIANIVHDGKP G
Sbjct: 407 RFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQAVHKN--TTYDLIANIVHDGKPSEGS 464
Query: 479 YRVFVQRKSEELW 491
YR+ V W
Sbjct: 465 YRIHVLHHGTGKW 477
>gi|241117268|ref|XP_002401865.1| ubiquitin specific peptidase, putative [Ixodes scapularis]
gi|215493221|gb|EEC02862.1| ubiquitin specific peptidase, putative [Ixodes scapularis]
Length = 505
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 199/443 (44%), Positives = 269/443 (60%), Gaps = 64/443 (14%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGH 161
RR+CPYLDT+NR VLDFDFEK CSVSLS +NVYACLVCGKY+QGRG +HAYTHS++ H
Sbjct: 35 RRNCPYLDTINRNVLDFDFEKLCSVSLSKINVYACLVCGKYFQGRGTNTHAYTHSVQVSH 94
Query: 162 HVYINLRTEKVYCLPDGYEINDPSLEDIRHV----------------------------- 192
HV++NL+T + YCLPD YEI D SL+DI +V
Sbjct: 95 HVFLNLQTLRFYCLPDNYEIVDSSLDDITYVLRPTFTKGDIIRLDLSDRLSRAYDGTTYL 154
Query: 193 ----GLNNIKETDFVNVTIQSLM-------RVTPLRNFFLIPENYRHCKSP-------LV 234
GLNNIK D+ NV +Q+ V PLRN+FL ENY K P +V
Sbjct: 155 PGIVGLNNIKANDYCNVVLQASAAGLAALSHVPPLRNYFLREENYAALKRPPGDITSLIV 214
Query: 235 HRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
RFG+L RK+W+ RNFK VSPHE LQAV+ SKKRF+I Q +P++F+SW LN+LH L
Sbjct: 215 QRFGELIRKLWNPRNFKAHVSPHEMLQAVVLCSKKRFQITEQGDPIDFLSWFLNSLHLAL 274
Query: 295 RNT-KKNTSIIYECFQGELEVV--KEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMP 351
T K+++SI+Y+ F+G + + K +P + + ++ + +N
Sbjct: 275 NGTQKRSSSIVYKTFRGGMNIYSRKVVPVEHTEAERRAALRTAEYQEKVENTG------- 327
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARM-RYRVTRLP 410
F+ L DLP PLFKD + +NIIPQVPLF IL KF+G + E + + R+++T LP
Sbjct: 328 FMYLTADLPAQPLFKDELRENIIPQVPLFTILSKFNGTSEKEYRTYKDSTLKRFQLTSLP 387
Query: 411 KYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVH 470
Y+IL+++RFTKN FFVEKNPT+VNFP+K+++L + + + YDLIAN+VH
Sbjct: 388 PYLILYIKRFTKNTFFVEKNPTIVNFPIKDVDLGELVAGAEGDDT----YVYDLIANVVH 443
Query: 471 DGKPEG--GFYRVFVQRKSEELW 491
+G+P G YR + + W
Sbjct: 444 EGEPGSGKGTYRAHLLHRGSGKW 466
>gi|336376913|gb|EGO05248.1| hypothetical protein SERLA73DRAFT_100998 [Serpula lacrymans var.
lacrymans S7.3]
Length = 496
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 201/431 (46%), Positives = 267/431 (61%), Gaps = 57/431 (13%)
Query: 80 DEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVC 139
++D DD GY Q + E + YLDT+NR +LDFDFEK CSVSLSN+N Y CLVC
Sbjct: 10 EDDYDDEIEGYEQSKN----EPKASDLYLDTINRALLDFDFEKVCSVSLSNINTYGCLVC 65
Query: 140 GKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIR--------- 190
GKY+QGRG+KS+AY HS+ HHV+INL T KV+ LPDGY ++DPSLEDI
Sbjct: 66 GKYFQGRGRKSYAYAHSIHDDHHVFINLETTKVHVLPDGYPVSDPSLEDISFVLAPSFTR 125
Query: 191 ---------------------------HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP 223
++GLNNIK D +NV I SL+ + PLR++ L+
Sbjct: 126 SSISSLSSSSHLLKPSYDLSSKPYLPGYIGLNNIKRNDHMNVIIHSLLHIPPLRDYLLL- 184
Query: 224 ENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFM 283
N+R +S LV RF L +K+W+ R FK QVSPHEFLQ V +AS +FR+ Q +PVEF+
Sbjct: 185 SNFRGKESELVKRFATLAKKVWNPRLFKSQVSPHEFLQEVNRASTGKFRLEQQGDPVEFL 244
Query: 284 SWLLNTLHSDLRNT-KKNTSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHD 341
WLLN LH D T KKN+S+I+ FQGEL V +++ +G +N + D D
Sbjct: 245 GWLLNRLHKDTGGTKKKNSSVIFSTFQGELRVETQQVLVRPDAG--ENEKPRFDIARDSK 302
Query: 342 NITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVAR 401
+ T+ PFL L +DLPPPPLF+D +EKNIIPQV + ++L K+DG+T E
Sbjct: 303 STTS-----PFLFLAVDLPPPPLFQDSVEKNIIPQVSIHSVLAKYDGKTTQESAG---QL 354
Query: 402 MRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSK 461
RY+ RLP+Y+ILH +RFTKN F EKNPT+VNFP++ ++ +DY+ P P +
Sbjct: 355 RRYKCQRLPEYIILHFKRFTKNAFVEEKNPTIVNFPLRGVDFRDYLDAP-PSHPPTV--- 410
Query: 462 YDLIANIVHDG 472
YDLIAN+ H+
Sbjct: 411 YDLIANVTHES 421
>gi|444518815|gb|ELV12403.1| U4/U6.U5 tri-snRNP-associated protein 2 [Tupaia chinensis]
Length = 544
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 210/464 (45%), Positives = 268/464 (57%), Gaps = 77/464 (16%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 77 REREADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 132
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 133 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 192
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 193 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 252
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 253 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 312
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQN 329
F+I Q + V+F+SW LN LHS L G + K K + ND+
Sbjct: 313 TFQITKQGDGVDFLSWFLNALHSAL--------------GGTKKKKKTEEKEQLLHNDEY 358
Query: 330 TEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE 389
E + F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+G
Sbjct: 359 QETMVEST--------------FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGI 404
Query: 390 TVTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYI 447
T E + + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+ N++L++Y+
Sbjct: 405 TEKEYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYL 463
Query: 448 PLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
++ + YDLIANIVHDGKP G YR+ V W
Sbjct: 464 SEEVQAVHKN--TTYDLIANIVHDGKPSEGSYRIHVLHHGTGKW 505
>gi|402220082|gb|EJU00155.1| hypothetical protein DACRYDRAFT_55351 [Dacryopinax sp. DJM-731 SS1]
Length = 485
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 190/406 (46%), Positives = 256/406 (63%), Gaps = 60/406 (14%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R LDFDFEK CSVSLSN+N+Y CLVCGKY+QGRG+ S+AY+HS+ HHV+IN
Sbjct: 33 YLDTIDRSALDFDFEKLCSVSLSNINIYGCLVCGKYFQGRGRSSYAYSHSIHEDHHVFIN 92
Query: 167 LRTEKVYCLPDGYEINDPSLEDIR------------------------------------ 190
L T KVY LPDGY ++DPSL+DI
Sbjct: 93 LETTKVYVLPDGYSVSDPSLQDIAAVLSPKFTANQVAGLSTAEHLTRPSYDLASHPYIPG 152
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE-NYRHCKSPLVHRFGDLTRKIWHARN 249
++GLNNIK D++NV I +L+ V+PLR++ L+ E N ++ S L RF L +K+W+ R
Sbjct: 153 YIGLNNIKRNDYLNVIIHALLHVSPLRDYLLLTELNPKY--SELAKRFATLAKKLWNPRL 210
Query: 250 FKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NTSIIYECF 308
FK QVSPHEFLQ V +AS +F+I Q +PVEFMSWLLN LH L TKK ++S+IY F
Sbjct: 211 FKAQVSPHEFLQEVTRASAGKFKITEQGDPVEFMSWLLNILHKGLGGTKKRDSSVIYHTF 270
Query: 309 QGELEVVKEIPKNTISGNDQNTEKGSD--GGDDHDNITTETSRMPFLMLGLDLPPPPLFK 366
QGE+ + + Q SD G + N +++ PFL L LDLPPPP+F+
Sbjct: 271 QGEVRL-----------DTQQIIVKSDRLGSERPVNTEIKSTSSPFLFLSLDLPPPPIFQ 319
Query: 367 DVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFF 426
D +EKNIIPQV L ++L K++G T E RY+ RLP Y+ILH +RFTKNNF
Sbjct: 320 DSIEKNIIPQVTLASVLAKYNGSTTQEFAG---QLRRYKCQRLPPYIILHFKRFTKNNFV 376
Query: 427 VEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG 472
EKNPT+VNFP++ ++ ++Y+ P P ++ + YDL+AN+ H+
Sbjct: 377 EEKNPTIVNFPLRGVDFREYLDNPIPGQS----TVYDLVANVTHES 418
>gi|390605008|gb|EIN14399.1| cysteine proteinase [Punctularia strigosozonata HHB-11173 SS5]
Length = 514
Score = 367 bits (943), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 197/406 (48%), Positives = 257/406 (63%), Gaps = 55/406 (13%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+NR LDFDFEK CSVS SN+NVY CL+CGKYYQGRG+KS AY HS+ HHV+IN
Sbjct: 53 YLDTINRAALDFDFEKVCSVSTSNVNVYGCLICGKYYQGRGRKSPAYAHSIHEDHHVFIN 112
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------- 192
L T KVY LPDGY +NDPSLEDI V
Sbjct: 113 LETTKVYVLPDGYPVNDPSLEDIAFVLAPSFTTASLPQASSPLYTSKPSYDLSSKPYLPG 172
Query: 193 --GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNF 250
GLNNIK+ D +NV IQSL+ V PLR++ L+ + + L+ RF LT+K+W+ R F
Sbjct: 173 FIGLNNIKKHDHMNVVIQSLLHVPPLRDYLLL-SRFAGKEPELLKRFAALTKKLWNPRLF 231
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NTSIIYECFQ 309
K QVSPHEFLQ V +AS +FR+ Q +PV+F+SWLLN LH D +KK N+SII+ CFQ
Sbjct: 232 KSQVSPHEFLQEVGRASAGKFRLEKQGDPVDFLSWLLNQLHKDTGGSKKANSSIIFSCFQ 291
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVM 369
G+L + E + + + EK D T+T+ PFL L +DLPPPPLF+D +
Sbjct: 292 GQLRM--ETQQIVVRPDAGLNEKPRFDIDRE----TKTTISPFLFLAVDLPPPPLFQDAV 345
Query: 370 EKNIIPQVPLFNILKKFDGETVTEVVRPHVAR---MRYRVTRLPKYMILHMRRFTKNNFF 426
EKNIIPQV + ++L K+DG+T E +VAR R++ RLP+Y+ILH +RFTKNNF
Sbjct: 346 EKNIIPQVTIQSVLAKYDGKTTLE----NVARGQLQRFKCLRLPQYIILHYKRFTKNNFV 401
Query: 427 VEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG 472
EKNPT+VNFP++ L+ +Y+ P+ + YDL+AN+ H+
Sbjct: 402 EEKNPTIVNFPLRGLDFGEYLNAPSSHPP----TMYDLLANVTHES 443
>gi|324506430|gb|ADY42746.1| U4/U6.U5 tri-snRNP-associated protein 2 [Ascaris suum]
Length = 727
Score = 367 bits (943), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 201/449 (44%), Positives = 269/449 (59%), Gaps = 67/449 (14%)
Query: 94 QRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAY 153
+R+++ + R CPYLDT++R LDFDFEK CSVSLS++NVYAC+VCGKY+QGRG +HAY
Sbjct: 238 KRAQIEKPSRQCPYLDTIDRGALDFDFEKLCSVSLSHVNVYACMVCGKYFQGRGTNTHAY 297
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV--------------------- 192
THSL+ H VY+NL T K YCLPD YEI DPSL+DI++V
Sbjct: 298 THSLDTNHRVYLNLETLKFYCLPDNYEIIDPSLDDIKYVLKPTYTTDYIKNIDKAAKMSR 357
Query: 193 ------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------L 233
GLNNIK D+ NV + +L V PLRN+FL ENY K P L
Sbjct: 358 AFDDTTYYPGIVGLNNIKANDYENVILHALSHVPPLRNYFLREENYAGIKRPPGDKLSLL 417
Query: 234 VHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSD 293
RFG+L RK+W+ + FK VSPHE LQA + S+++F+I Q + EF+++LLNTLH
Sbjct: 418 PKRFGELIRKLWNPKAFKAHVSPHEMLQASVLCSERKFQITKQGDASEFLNFLLNTLHIA 477
Query: 294 LRNTKK-NTSIIYECFQGELE--VVKEIPKNT-------ISGNDQNTEKGSDGGDDHDNI 343
L TKK ++SI+Y F+G + K +P T +S +DQ EK D
Sbjct: 478 LNGTKKTSSSIVYRIFRGRMHEYTRKVMPVETTEEERRVLSESDQYQEKMKD-------- 529
Query: 344 TTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARM- 402
+PFL L LDLP PL++D + +NIIPQVPL +L KF+G E + M
Sbjct: 530 ------LPFLYLTLDLPAAPLYRDELMQNIIPQVPLSVLLTKFNGAIEKEYKTYNENFMK 583
Query: 403 RYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKY 462
R+ + RLP Y+I+ +RF KN +FVEKNPT+VNFP+ N++L D + P + K + Y
Sbjct: 584 RFELVRLPPYLIIMYKRFHKNQWFVEKNPTIVNFPISNVDLYDCL-APASRSLHKF-TTY 641
Query: 463 DLIANIVHDGKPEGGFYRVFVQRKSEELW 491
DL++NIVHDG PE G YR+ + + W
Sbjct: 642 DLVSNIVHDGPPESGSYRIQLLHNGTQKW 670
>gi|299470225|emb|CBN79529.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 516
Score = 367 bits (942), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 208/476 (43%), Positives = 270/476 (56%), Gaps = 109/476 (22%)
Query: 125 SVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDP 184
S+SLSN NVYACLVCGKY+QGRG+ +HAYTHS++ GHHV+INLRT +VYCLPD YE+ D
Sbjct: 9 SISLSNNNVYACLVCGKYFQGRGRNTHAYTHSVQNGHHVFINLRTCRVYCLPDSYEVVDS 68
Query: 185 SLEDIRH---------------------------------VGLNNIKETDFVNVTIQSLM 211
SLEDI+ VGLNN+K TDFVNV + +L
Sbjct: 69 SLEDIKRALDPRYSPECIAVLDKNTTLSRDQYGVAYLPGFVGLNNLKCTDFVNVVLHALA 128
Query: 212 RVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRF 271
V PLRNFF+ P+NY+ KS LVH FG++ R++W NFK VSPHEF+QAV ASKKRF
Sbjct: 129 HVPPLRNFFVEPDNYKDSKSTLVHAFGEVVRRVWSPSNFKSAVSPHEFIQAVSYASKKRF 188
Query: 272 RIGVQSNPVEFMSWLLNTLHSDLRNTKK-NTSIIYECFQG--ELEVVKEIPKNTISGNDQ 328
R GVQS ++F++WLLN+LH L T+K +S++++ FQG E+E + + K + +D+
Sbjct: 189 RPGVQSEAIDFLAWLLNSLHQGLGGTRKAGSSVVFQTFQGLVEVETLTKKKKAILDDDDE 248
Query: 329 NTEKGSDG---------------GDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNI 373
G G D + + + +PFL L LD+P PLFKD NI
Sbjct: 249 EGGGGVGNARGKAGAAAAEDELVGFDEADWDKKKAEVPFLHLTLDIPATPLFKDSQGGNI 308
Query: 374 IPQVPLFNILKKFDGETVTEVVRPHV-ARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPT 432
IPQ+PLF +L K++GE T+VV+ V R RY + RLP+Y+I H+ RFTKNNF+VEKNPT
Sbjct: 309 IPQIPLFKVLDKYNGENWTDVVKGGVLTRKRYVLRRLPRYLIFHLARFTKNNFYVEKNPT 368
Query: 433 LVNFPVKNLELKDYIPLP---TPKEN---------------------------------- 455
+VNFPVKNLELKD++ PKE
Sbjct: 369 IVNFPVKNLELKDWLRAEDPGLPKEEDLAGMSIKQLKAHLNKYSISSKDCVERRDLEEKV 428
Query: 456 ---------EKLRSKYDLIANIVHDGKP-----------EGGFYRVFVQRKSEELW 491
E L +KY+L+AN+ HD P G YR VQ K+ E W
Sbjct: 429 RDTLIKTVPELLATKYNLLANVCHDSPPGQGKEGQTDPLSAGCYRAHVQNKATEQW 484
>gi|409051981|gb|EKM61457.1| hypothetical protein PHACADRAFT_156708 [Phanerochaete carnosa
HHB-10118-sp]
Length = 517
Score = 367 bits (941), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 191/411 (46%), Positives = 261/411 (63%), Gaps = 55/411 (13%)
Query: 101 VRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAG 160
VR YLDT+NR VLDFDFEK CSVSLSN+N+Y CLVCGKY+QGRG+ S+AY H++
Sbjct: 54 VRASDLYLDTINRAVLDFDFEKVCSVSLSNINIYGCLVCGKYFQGRGKSSYAYAHAIHDD 113
Query: 161 HHVYINLRTEKVYCLPDGYEINDPSLEDIR------------------------------ 190
HHV+INL T KVY LPDGY ++DPSLEDI
Sbjct: 114 HHVFINLETAKVYVLPDGYPVSDPSLEDISFVLAPSFSKSSIANLSAPAHLLKPSYDLSS 173
Query: 191 ------HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKI 244
++GLNNIK D++NV I SL+ V PLR++ L+ N++ +S ++ RF L +K+
Sbjct: 174 KPYIPGYIGLNNIKRNDYMNVIIHSLLHVPPLRDYLLL-SNFKGKESEMLRRFAGLAKKV 232
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NTSI 303
W+ R FK QVSPHE LQ V +AS +F + Q +P EF+ WLLN LH D+ TKK N+S+
Sbjct: 233 WNPRLFKSQVSPHELLQEVGRASVGKFSLEKQGDPAEFLGWLLNHLHKDMGGTKKRNSSV 292
Query: 304 IYECFQGEL--EVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPP 361
++ FQGEL E + + ++ + GN++ D I T TS PFL L +DLPP
Sbjct: 293 MFSTFQGELRMETQQVVVRSDLRGNEKPR------FDIDREIRTTTS--PFLFLAVDLPP 344
Query: 362 PPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFT 421
PPLF+D +EKNIIPQV + ++L K+DG T E R+++ RLP Y++LH +RFT
Sbjct: 345 PPLFQDSVEKNIIPQVSIQSVLAKYDGRTAQESAG---QLRRFKLQRLPPYIVLHFKRFT 401
Query: 422 KNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG 472
KN F EKNPT+VNFP++ L+L++Y+ +P EN + YDL+AN++H+
Sbjct: 402 KNAFVEEKNPTIVNFPLRGLDLREYLEVP---ENHP-PAMYDLVANVIHES 448
>gi|325181123|emb|CCA15538.1| U4/U6.U5 trisnRNPassociated protein putative [Albugo laibachii
Nc14]
Length = 521
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 199/482 (41%), Positives = 277/482 (57%), Gaps = 98/482 (20%)
Query: 100 EVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEA 159
+ RR CPYLDT+N Q+LDFDFEK CS++LS+ NVYACLVCGKY++GRG+ +HA+THS++A
Sbjct: 19 KTRRKCPYLDTINTQLLDFDFEKICSITLSDQNVYACLVCGKYFKGRGKSTHAFTHSVQA 78
Query: 160 GHHVYINLRTEKVYCLPDGYEINDPSLEDIR----------------------------- 190
HHV+INL+ ++++CLPD YE+ D SL+ I+
Sbjct: 79 SHHVFINLQNDRIFCLPDNYEVVDQSLKPIKDALRPTFTEDMIRNLDQNQVLAQDAFGVS 138
Query: 191 ----HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHC-KSPLVHRFGDLTRKIW 245
+GLNN+K TD+++V + +L + PLR+FFL+ N KS + RFG+L KIW
Sbjct: 139 YLPGFIGLNNLKRTDYISVVVHALAHIPPLRDFFLLTSNTNITHKSSFLLRFGELLCKIW 198
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSII 304
N K +SPHEF+Q V SK+RF IG Q +EFMSWLLN LH +L + T SII
Sbjct: 199 SPYNIKNTISPHEFVQEVSVKSKRRFHIGQQHECIEFMSWLLNELHRELCKRTNSKKSII 258
Query: 305 YECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNIT--TETSRMPFLMLGLDLPPP 362
ECFQG ++V + N+ T+ +H++ T+T + PFL L LDLP
Sbjct: 259 QECFQGFVDVT--------TTNESATKSSETEQKEHESSAPRTQTIKTPFLFLSLDLPTS 310
Query: 363 PLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRP-HVARMRYRVTRLPKYMILHMRRFT 421
PLFKD N+IPQVPL+ +L+K++G T V++ + Y++ P+Y+ILH++RFT
Sbjct: 311 PLFKDSQGGNVIPQVPLYTVLEKYNGSKTTFVLQDLQRHKKTYQIRLHPRYLILHVKRFT 370
Query: 422 KNNFFVEKNPTLVNFPVKNLELKDYIPLPT-------------------------PKENE 456
+NNFFVEKN T+VNFPVKNLE+++Y+ + + P +
Sbjct: 371 RNNFFVEKNSTIVNFPVKNLEIREYLFMDSQSPDMKQLDEKSIAEMRELLDQKEIPYDAS 430
Query: 457 KLRS--------------KYDLIANIVHD-----GKPEG--------GFYRVFVQRKSEE 489
+ RS KY+L+ANI HD GK G YRV VQ K+ E
Sbjct: 431 ETRSQLLIKLQEATLTSTKYNLVANICHDSPLTKGKTTNLNTNPLTEGSYRVHVQNKATE 490
Query: 490 LW 491
W
Sbjct: 491 QW 492
>gi|260830804|ref|XP_002610350.1| hypothetical protein BRAFLDRAFT_120059 [Branchiostoma floridae]
gi|229295715|gb|EEN66360.1| hypothetical protein BRAFLDRAFT_120059 [Branchiostoma floridae]
Length = 464
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 212/465 (45%), Positives = 273/465 (58%), Gaps = 92/465 (19%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R D ED++ + G G RSR CPYLDT+NR +LDFDFEK CSVSLS
Sbjct: 7 RKYSDSSEDEENEPTRRVRG-GSDARSR------HCPYLDTINRSLLDFDFEKLCSVSLS 59
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
+LNVYACLVCGKY+QGRG+KSHAYTHS++ HHV++NL T K YCLPD YE+ D SL+DI
Sbjct: 60 HLNVYACLVCGKYFQGRGRKSHAYTHSVQVDHHVFLNLHTLKFYCLPDNYEVIDSSLDDI 119
Query: 190 RH---------------------------------VGLNNIKETDFVNVTIQSLMRVTPL 216
++ VGLNNIK D+ NV +Q+L V+PL
Sbjct: 120 KYVLNPTFKTDHIQQLDGSSKLSRAYDSTMYLPGIVGLNNIKANDYCNVVLQALSHVSPL 179
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
R++FL ENY+ K P +V RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 180 RDYFLQEENYKDIKRPPGDIMFLIVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 239
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQN 329
RF+I Q +P++F+SW LN +H+ + KK S
Sbjct: 240 RFQITEQGDPIDFLSWFLNAMHASMGGNKKVMS--------------------------- 272
Query: 330 TEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE 389
+TT PF+ L LDLPPPPLF+D E+NIIPQVPL N+L KF+GE
Sbjct: 273 -----------KTVTTS----PFMYLTLDLPPPPLFQDEYEQNIIPQVPLANLLAKFNGE 317
Query: 390 TVTEVVRPHVARM-RYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIP 448
E + + R+ +TRLP Y+IL+++RFTKNNF+VEKNPT+V FPVKN++L++Y+
Sbjct: 318 AEKEYKSYKDSTLKRFELTRLPPYLILYVKRFTKNNFYVEKNPTIVTFPVKNIDLREYLS 377
Query: 449 LPTPKENEKLRSKYDLIANIVHDGKPEG--GFYRVFVQRKSEELW 491
+ + + YDLIANIVHDG P G YRV + K W
Sbjct: 378 KDPEIQKKHPNTTYDLIANIVHDGLPGAGKGTYRVHIYHKGSGQW 422
>gi|170084453|ref|XP_001873450.1| spindle pole body protein [Laccaria bicolor S238N-H82]
gi|164651002|gb|EDR15242.1| spindle pole body protein [Laccaria bicolor S238N-H82]
Length = 519
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 198/415 (47%), Positives = 256/415 (61%), Gaps = 55/415 (13%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHS 156
R E R YLDT+NR +LDFDFEK CSVSLSN+N+Y CLVCGKY+QGRG+KS+AY HS
Sbjct: 53 RAEESRASDLYLDTINRAILDFDFEKVCSVSLSNINIYGCLVCGKYFQGRGRKSYAYAHS 112
Query: 157 LEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------ 192
+ HHV+INL T KVY LPDGY ++DPSLEDI +V
Sbjct: 113 IHDDHHVFINLETTKVYVLPDGYLVSDPSLEDISYVLAPSFTPSSIAHLSSNTHILKPSY 172
Query: 193 ------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDL 240
GLNNIK D +NV I SL+ + PLR+ L+ YR +S L+ RF L
Sbjct: 173 DLTNKPYLPGYVGLNNIKRNDHMNVIIHSLLHIPPLRDSLLL-SRYRGKESELLKRFAGL 231
Query: 241 TRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKN 300
+K+W+ R FK QVSPHEFLQ V +AS +FR+ Q +P EF+ WLLN LH DL TKK
Sbjct: 232 AKKVWNPRLFKSQVSPHEFLQEVNRASGGKFRLEQQGDPAEFLGWLLNRLHKDLGGTKKK 291
Query: 301 -TSIIYECFQGE--LEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGL 357
+S I+ FQGE LE + + + + ND+ D +I T S PFL L +
Sbjct: 292 CSSTIFSTFQGELRLETQQVLVRPDVGENDKPR------FDIDRDIKTSVS--PFLFLAV 343
Query: 358 DLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHM 417
DLPPPPLF+D +EKNIIPQV + ++L K+DG T E H+ RY+ RLP Y+ILH
Sbjct: 344 DLPPPPLFQDAIEKNIIPQVGIHSVLSKYDGRTTQESA-GHL--RRYKCQRLPPYIILHY 400
Query: 418 RRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG 472
+RFTKN F EKNPT+VNFP++ ++ ++Y+ P+ E + YDLIAN+ H+
Sbjct: 401 KRFTKNAFVEEKNPTIVNFPLRGVDFREYVDAPSTNET----TLYDLIANVTHES 451
>gi|392597787|gb|EIW87109.1| cysteine proteinase [Coniophora puteana RWD-64-598 SS2]
Length = 531
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 199/427 (46%), Positives = 260/427 (60%), Gaps = 60/427 (14%)
Query: 83 EDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKY 142
E G GQ + S L YLDT+NR LDFDFEK CSVSLSN+NVY CLVCGKY
Sbjct: 47 EQAAKTGKGQPRASDL--------YLDTINRAQLDFDFEKLCSVSLSNINVYGCLVCGKY 98
Query: 143 YQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIR------------ 190
+QGRG+ S+AY HS+ HHV+INL T KVY LPDGY ++DPSLEDI
Sbjct: 99 FQGRGKSSYAYYHSIHEDHHVFINLETTKVYVLPDGYAVSDPSLEDISFVLNPSFTKSAT 158
Query: 191 ------------------------HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY 226
+VGLNNIK+ D +NV I +L+ + PLR++ L+
Sbjct: 159 AALSTPAHLSRPSYDLAGHAYLPGYVGLNNIKKNDHMNVIIHALLHIPPLRDYLLLTRPT 218
Query: 227 RHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWL 286
++ LV RF L +K+W+ R FK QVSPHEFLQ V +AS RFR+ Q +PVEF+ WL
Sbjct: 219 GK-ETELVRRFAVLAKKLWNPRLFKSQVSPHEFLQEVNRASTGRFRLENQGDPVEFLGWL 277
Query: 287 LNTLHSDLRNT-KKNTSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNIT 344
LN LH D+ T KKN+SII+ FQGEL +++ +G ++ D +I
Sbjct: 278 LNRLHQDMGGTRKKNSSIIFSTFQGELRAQTQQVLVRPDTGTNEKPR-----FDIARDIR 332
Query: 345 TETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRY 404
T S PFL L +DLPPPPLF+D +EKNIIPQV + ++L K+DGET E+ RY
Sbjct: 333 TTVS--PFLFLAVDLPPPPLFQDAVEKNIIPQVNIHSVLAKYDGETTQEL---GGQVKRY 387
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+ RLP Y+I+H +RFTKN F EKNPT+VNFP++ L+ +DY+ P+ + + YDL
Sbjct: 388 KCQRLPPYIIIHFKRFTKNAFVEEKNPTIVNFPLRGLDFRDYLDAPSTAPGDTV---YDL 444
Query: 465 IANIVHD 471
IAN+ H+
Sbjct: 445 IANVTHE 451
>gi|393907486|gb|EFO24316.2| ubiquitin specific peptidase 39 [Loa loa]
Length = 698
Score = 364 bits (934), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 198/447 (44%), Positives = 269/447 (60%), Gaps = 63/447 (14%)
Query: 94 QRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAY 153
+++++ + R CPYLDT++R LDFDFEK CSVSLS++NVYAC+VCGKY+QGRG +HAY
Sbjct: 212 KKAQIEKPSRQCPYLDTIDRCALDFDFEKLCSVSLSHINVYACMVCGKYFQGRGTSTHAY 271
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV--------------------- 192
THSL+ H V++NL T K YCLPD YEI DPSL+DI++V
Sbjct: 272 THSLDTNHRVFLNLSTLKFYCLPDNYEIIDPSLDDIKYVLKPTYTTKYIMEIDKMGKMAR 331
Query: 193 ------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------L 233
GLNNIK D+ NV + +L V PLR++FL ENY + K P L
Sbjct: 332 AFDGTTYHPGVVGLNNIKANDYENVVLHALSHVPPLRDYFLREENYINIKRPPGDKLTLL 391
Query: 234 VHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSD 293
RFG+L RK+W+ + FK VSPHE LQA + S K+F+I Q + EF+++LLNTLH
Sbjct: 392 PKRFGELIRKLWNPKAFKAHVSPHEMLQASVLCSSKKFQITKQGDAAEFLNFLLNTLHIA 451
Query: 294 LRNTKK-NTSIIYECFQGELE--VVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM 350
L T+K ++SIIY+ F+G L K IP T TE+ + D + +
Sbjct: 452 LNGTRKTSSSIIYKIFRGRLHEFTRKVIPVET-------TEEARKNLLETDEYKEKKLEI 504
Query: 351 PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARM-RYRVTRL 409
PFL L LDLP PL++D + +NIIPQVPL +L KF+G T E M R+++ RL
Sbjct: 505 PFLYLTLDLPAAPLYRDELLQNIIPQVPLSVLLTKFNGATEKEYKTYSENFMKRFQLVRL 564
Query: 410 PKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLR-----SKYDL 464
P Y+I+ +RF KN +FVEKNPT+VNFP+ N++L D + E++R + YDL
Sbjct: 565 PPYLIITYKRFHKNQWFVEKNPTIVNFPISNVDLYDCLA-------EEMRPLHKYTTYDL 617
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++NIVHDG P G YR+ + + W
Sbjct: 618 VSNIVHDGPPSSGSYRIQILHNGTQKW 644
>gi|312073962|ref|XP_003139756.1| ubiquitin specific peptidase 39 [Loa loa]
Length = 692
Score = 363 bits (933), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 198/447 (44%), Positives = 269/447 (60%), Gaps = 63/447 (14%)
Query: 94 QRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAY 153
+++++ + R CPYLDT++R LDFDFEK CSVSLS++NVYAC+VCGKY+QGRG +HAY
Sbjct: 206 KKAQIEKPSRQCPYLDTIDRCALDFDFEKLCSVSLSHINVYACMVCGKYFQGRGTSTHAY 265
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV--------------------- 192
THSL+ H V++NL T K YCLPD YEI DPSL+DI++V
Sbjct: 266 THSLDTNHRVFLNLSTLKFYCLPDNYEIIDPSLDDIKYVLKPTYTTKYIMEIDKMGKMAR 325
Query: 193 ------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------L 233
GLNNIK D+ NV + +L V PLR++FL ENY + K P L
Sbjct: 326 AFDGTTYHPGVVGLNNIKANDYENVVLHALSHVPPLRDYFLREENYINIKRPPGDKLTLL 385
Query: 234 VHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSD 293
RFG+L RK+W+ + FK VSPHE LQA + S K+F+I Q + EF+++LLNTLH
Sbjct: 386 PKRFGELIRKLWNPKAFKAHVSPHEMLQASVLCSSKKFQITKQGDAAEFLNFLLNTLHIA 445
Query: 294 LRNTKK-NTSIIYECFQGELE--VVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM 350
L T+K ++SIIY+ F+G L K IP T TE+ + D + +
Sbjct: 446 LNGTRKTSSSIIYKIFRGRLHEFTRKVIPVET-------TEEARKNLLETDEYKEKKLEI 498
Query: 351 PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARM-RYRVTRL 409
PFL L LDLP PL++D + +NIIPQVPL +L KF+G T E M R+++ RL
Sbjct: 499 PFLYLTLDLPAAPLYRDELLQNIIPQVPLSVLLTKFNGATEKEYKTYSENFMKRFQLVRL 558
Query: 410 PKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLR-----SKYDL 464
P Y+I+ +RF KN +FVEKNPT+VNFP+ N++L D + E++R + YDL
Sbjct: 559 PPYLIITYKRFHKNQWFVEKNPTIVNFPISNVDLYDCLA-------EEMRPLHKYTTYDL 611
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++NIVHDG P G YR+ + + W
Sbjct: 612 VSNIVHDGPPSSGSYRIQILHNGTQKW 638
>gi|426201316|gb|EKV51239.1| spindle pole body protein [Agaricus bisporus var. bisporus H97]
Length = 502
Score = 363 bits (933), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 196/404 (48%), Positives = 256/404 (63%), Gaps = 53/404 (13%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+NR VLDFDFEK CSVSLSN+N+Y CLVCGKY+QGRG+KS+AY HS+ HHV+IN
Sbjct: 55 YLDTINRAVLDFDFEKVCSVSLSNINIYGCLVCGKYFQGRGKKSYAYAHSIHEDHHVFIN 114
Query: 167 LRTEKVYCLPDGYEINDPSLEDIR------------------------------------ 190
L T KVY LPDGY + DPSLEDI
Sbjct: 115 LHTTKVYVLPDGYPVADPSLEDIAFVLAPNFTPNSISNLSSPMHLEKLSYDLQHQPYLSG 174
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNF 250
++GLNNIK D +NV I +L+ V PLR++ L+ ++R+ ++ L+ RF L +KIW+ R F
Sbjct: 175 YIGLNNIKRNDHMNVVIHALLHVPPLRDYLLL-SDFRNKETELIKRFAALAKKIWNPRLF 233
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NTSIIYECFQ 309
K QVSPHEFLQ V +AS +FR+ Q +PVEF+ WLLN LH DL +KK N+SII+ FQ
Sbjct: 234 KSQVSPHEFLQEVNRASGGKFRLEQQGDPVEFLGWLLNRLHKDLGGSKKRNSSIIFSTFQ 293
Query: 310 GELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDV 368
GEL V +++ SG ++ D +I + +S PFL L +DLPPPPLF+D
Sbjct: 294 GELRVETQQVLVRPDSGENEKPRFDID-----RDIKSTSS--PFLFLAVDLPPPPLFQDS 346
Query: 369 MEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVE 428
EKNIIPQV + +IL K+DG+T E RY+ +LP Y+ILH +RFTKN F E
Sbjct: 347 HEKNIIPQVGIHSILSKYDGKTTQESAG---QLRRYKCHKLPPYIILHFKRFTKNIFVEE 403
Query: 429 KNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG 472
KNPT+VNFP++ L+ +Y+ +P P L YDLIAN+ H+
Sbjct: 404 KNPTIVNFPLRGLDFGEYVDIP-PDGGSTL---YDLIANVTHES 443
>gi|327287130|ref|XP_003228282.1| PREDICTED: u4/U6.U5 tri-snRNP-associated protein 2-like [Anolis
carolinensis]
Length = 463
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 201/428 (46%), Positives = 264/428 (61%), Gaps = 53/428 (12%)
Query: 108 LDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINL 167
L V + VLDFDFEK CS+SLS++NVYACLVCGKY+QGRG KSHAY HS++ HHV++NL
Sbjct: 5 LTNVLKSVLDFDFEKLCSISLSHINVYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNL 64
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV---------------------------------GL 194
T K YCLPD YEI D SLEDI +V GL
Sbjct: 65 HTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQHIANLDKQAKLSRAYDGTTYLPGIVGL 124
Query: 195 NNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHA 247
NNIK D+ N +Q+L V PLRN+FL ENY++ K P LV RFG+L RK+W+
Sbjct: 125 NNIKANDYANAVLQALSNVPPLRNYFLEEENYKNIKRPPGDIMFLLVQRFGELMRKLWNP 184
Query: 248 RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYE 306
RNFK VSPHE LQAV+ SKK F+I Q + V+F+SW LN LHS L KK +I+ +
Sbjct: 185 RNFKAHVSPHEMLQAVVLCSKKNFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTD 244
Query: 307 CFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLF 365
FQG + + K++P + ++ E+ + + + T F+ L LDLP PL+
Sbjct: 245 VFQGSMRIFTKKLPHPDLPAEEK--EQLLQNEEYQEKMVEST----FMYLTLDLPTAPLY 298
Query: 366 KDVMEKNIIPQVPLFNILKKFDGETVTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKN 423
KD E+ IIPQVPLFNIL KF+G T E + + + R+++T+LP Y+I ++RFTKN
Sbjct: 299 KDEKEQLIIPQVPLFNILAKFNGITEKEYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKN 357
Query: 424 NFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFV 483
NFFVEKNPT+VNFP+ N++L++Y+ ++ + YDLIANIVHDGKP G YR+ V
Sbjct: 358 NFFVEKNPTIVNFPITNVDLREYLSEEVQAVHK--NTTYDLIANIVHDGKPAEGAYRIHV 415
Query: 484 QRKSEELW 491
W
Sbjct: 416 LHHGTGKW 423
>gi|409083639|gb|EKM83996.1| hypothetical protein AGABI1DRAFT_110600 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 502
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 195/404 (48%), Positives = 256/404 (63%), Gaps = 53/404 (13%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+NR VLDFDFEK CSVSLSN+N+Y CLVCGKY+QGRG+KS+AY HS+ HHV+IN
Sbjct: 55 YLDTINRAVLDFDFEKVCSVSLSNINIYGCLVCGKYFQGRGKKSYAYAHSIHEDHHVFIN 114
Query: 167 LRTEKVYCLPDGYEINDPSLEDIR------------------------------------ 190
L T KVY LPDGY + DPSLEDI
Sbjct: 115 LHTTKVYVLPDGYPVADPSLEDIAFVLAPNFTPNSISNLSSPMHLEKLSYDLQHQPYLSG 174
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNF 250
++GLNNIK D +NV I +L+ V PLR++ L+ ++R+ ++ L+ RF L +KIW+ R F
Sbjct: 175 YIGLNNIKRNDHMNVVIHALLHVPPLRDYLLL-SDFRNKETELIKRFAALAKKIWNPRLF 233
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NTSIIYECFQ 309
K QVSPHEFLQ V +AS +FR+ Q +PVEF+ WLLN LH DL +KK N+SII+ FQ
Sbjct: 234 KSQVSPHEFLQEVNRASGGKFRLEQQGDPVEFLGWLLNRLHKDLGGSKKRNSSIIFSTFQ 293
Query: 310 GELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDV 368
GEL V +++ SG ++ D +I + +S PFL L +DLPPPPLF+D
Sbjct: 294 GELRVETQQVLVRPDSGENEKPRFDID-----RDIKSTSS--PFLFLAVDLPPPPLFQDS 346
Query: 369 MEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVE 428
EKNIIPQV + ++L K+DG+T E RY+ +LP Y+ILH +RFTKN F E
Sbjct: 347 HEKNIIPQVGIHSVLSKYDGKTTQESTG---QLRRYKCHKLPPYIILHFKRFTKNIFVEE 403
Query: 429 KNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG 472
KNPT+VNFP++ L+ +Y+ +P P L YDLIAN+ H+
Sbjct: 404 KNPTIVNFPLRGLDFGEYVDIP-PDGGSTL---YDLIANVTHES 443
>gi|355565860|gb|EHH22289.1| hypothetical protein EGK_05524 [Macaca mulatta]
Length = 565
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 205/461 (44%), Positives = 276/461 (59%), Gaps = 56/461 (12%)
Query: 78 DKDEDEDDLANGYGQGQRSRLVEVRRDCP---YLDTVNRQVLDFDFEKFCSVSLSNLNVY 134
+++ DED + + R+ R P +L R VLDFDFEK CS+SLS++N Y
Sbjct: 75 EREVDEDSEPEREVRAKNGRVDSEDRRSPHTCFLFCFLRSVLDFDFEKLCSISLSHINAY 134
Query: 135 ACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV-- 192
ACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI +V
Sbjct: 135 ACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLK 194
Query: 193 -------------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFL 221
GLNNIK D+ N +Q+L V PLRN+FL
Sbjct: 195 PTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNYFL 254
Query: 222 IPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG 274
+NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK F+I
Sbjct: 255 EEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQIT 314
Query: 275 VQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGNDQNTEK 332
Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + ++
Sbjct: 315 KQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEKEQLL 374
Query: 333 GSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVT 392
+ D++ E++ F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+G T
Sbjct: 375 HN---DEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGITEK 428
Query: 393 E--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLP 450
E + + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+ N++L++Y+
Sbjct: 429 EYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLSEE 487
Query: 451 TPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
++ + YDLIANIVHDGKP G YR+ V W
Sbjct: 488 VQAVHKN--TTYDLIANIVHDGKPSEGSYRIHVLHHGTGKW 526
>gi|340502777|gb|EGR29429.1| ubiquitin carboxyl-terminal, putative [Ichthyophthirius
multifiliis]
Length = 545
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 192/448 (42%), Positives = 267/448 (59%), Gaps = 66/448 (14%)
Query: 91 GQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKS 150
G+ Q+ + E+R+DCPY+ T+ R +LDFDFEK CS+SL+NLNVYACL+CGKYYQGR + +
Sbjct: 80 GKSQQEEITEIRKDCPYISTIKRHMLDFDFEKLCSISLANLNVYACLICGKYYQGRCKNT 139
Query: 151 HAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH------------------- 191
+AY H+LE HH+YINL KVYCLPD YE+ D SL DI++
Sbjct: 140 NAYLHALETNHHMYINLHNAKVYCLPDNYEVQDQSLNDIKYNLAPTYSQEQIKNLDTLKP 199
Query: 192 --------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRH-----CKSP 232
VGLNNIK D+VNV IQ+L RV LR+ ++ N + K+
Sbjct: 200 SSKALNGIDYIPGFVGLNNIKMNDYVNVIIQALCRVPLLRDQIILYNNTVNQDVFDLKTL 259
Query: 233 LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHS 292
L RF +L +KIW+ +NFKGQVSPHE LQA++ S K+F I +QS+P++ + WLLN++
Sbjct: 260 LSKRFSNLIKKIWNPKNFKGQVSPHELLQAIVLKSNKKFNINLQSDPIKLLCWLLNSIQI 319
Query: 293 DLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPF 352
+L++T + +I CF+GE+EV P G + M F
Sbjct: 320 ELKDTHF-SDLIENCFKGEVEVHTYKPLQNQIGYSS---------------VPKIEAMSF 363
Query: 353 LMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKY 412
+ L L++PPPPL KD K IP++P+FN+LKKFDG VT P R YR+ +LPKY
Sbjct: 364 IYLTLNIPPPPLHKDDSLKINIPEMPIFNLLKKFDG--VTTYDNPKF-RKTYRIKKLPKY 420
Query: 413 MILHMRRFTKNNFFVEKNPTLVNFPVKNLELKD---------YIPLPTPKENEKLRSKYD 463
+ILHM RFT N +++EKNPT+V FP+ NL+LK YI +E +KY+
Sbjct: 421 LILHMERFTFNKYYLEKNPTIVRFPLNNLDLKGCIYKNINKVYILFQQKDVDEGSCTKYN 480
Query: 464 LIANIVHDGKPEGGFYRVFVQRKSEELW 491
L+A+I H+G + G Y++ V+ K+ W
Sbjct: 481 LLASICHEGPTKNGIYKIHVRNKANNQW 508
>gi|405963740|gb|EKC29293.1| U4/U6.U5 tri-snRNP-associated protein 2 [Crassostrea gigas]
Length = 658
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 210/458 (45%), Positives = 281/458 (61%), Gaps = 57/458 (12%)
Query: 81 EDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCG 140
E E +A+ + + V+ R CPYLDT+NR VLDFDFEK CSVSLS++NVYACLVCG
Sbjct: 151 ESEPKVADAGAEAVQDPKVDRSRSCPYLDTINRSVLDFDFEKLCSVSLSHINVYACLVCG 210
Query: 141 KYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV-------- 192
KY+QGRG+ SHAYTHS+ HHV++NL T+K YCLPD Y+I D SL+DI +V
Sbjct: 211 KYFQGRGKLSHAYTHSVLDSHHVFLNLLTQKFYCLPDNYQIIDSSLDDIIYVLNPTFSNE 270
Query: 193 -------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR 227
GLNNIKE D+ NV +Q+L VTPLRNFFL +NY+
Sbjct: 271 HIASLDSSSKLSRAYDGTTYLPGIVGLNNIKENDYCNVILQALSHVTPLRNFFLQEDNYK 330
Query: 228 HCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPV 280
K P V RFG+L RK+W+ RNFK VSPHE LQAV+ SKK+F+I Q + +
Sbjct: 331 KIKRPPGDQMFLTVQRFGELLRKLWNPRNFKAHVSPHEMLQAVVLCSKKKFQITEQGDAL 390
Query: 281 EFMSWLLNTLHSDLRNTKK-NTSIIYECFQGELEVV--KEIPKNTISGNDQNTEKGSDGG 337
EFMSW LN LH + TKK N++I+ + F+G++ V K +P + +
Sbjct: 391 EFMSWFLNALHLAMNGTKKLNSTIVNKTFRGKMRVYTRKVLPIDLKEEEKEKLLLT---- 446
Query: 338 DDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRP 397
D +P+L L DLPPPPL+ D +++NIIPQVP ++L KF+G + E
Sbjct: 447 ---DEYLEHAEEIPWLYLTCDLPPPPLYPDELQENIIPQVPFASLLTKFNGVSEKEYKTH 503
Query: 398 HVARM-RYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENE 456
+++ R+++TRLP ++I+ ++RFTKN F EKNPT+VNFP+KN++ D L P+
Sbjct: 504 KDSQLKRFQITRLPNFLIIFIKRFTKNYFIKEKNPTIVNFPIKNIDFGD---LLAPEHRV 560
Query: 457 KLR-SKYDLIANIVHDGKPE--GGFYRVFVQRKSEELW 491
R + YDL+ANIVHDG+PE G YRV V K + W
Sbjct: 561 LHRNTTYDLMANIVHDGEPERGKGTYRVHVLHKGTQKW 598
>gi|302694755|ref|XP_003037056.1| hypothetical protein SCHCODRAFT_80616 [Schizophyllum commune H4-8]
gi|300110753|gb|EFJ02154.1| hypothetical protein SCHCODRAFT_80616 [Schizophyllum commune H4-8]
Length = 532
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 204/452 (45%), Positives = 266/452 (58%), Gaps = 71/452 (15%)
Query: 63 AKVGQNGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEK 122
AKV +N D E DEDE A + EV+ YLDT+NR VLDFDFEK
Sbjct: 22 AKVTENVN---GDHESDDEDEPIQAESVPE-------EVKASDLYLDTINRAVLDFDFEK 71
Query: 123 FCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEIN 182
CSVSLS++NVY CLVCGKY+QGRG KS+AY HS+ HHV+INL T KVY LPDGY ++
Sbjct: 72 VCSVSLSDINVYGCLVCGKYFQGRGPKSYAYAHSIHEDHHVFINLETTKVYVLPDGYPVS 131
Query: 183 DPSLEDIR------------------------------------HVGLNNIKETDFVNVT 206
DPSLEDI ++GLNNIK D +NV
Sbjct: 132 DPSLEDIAFVLAPSFTPQGVKALSSPAVLAKQSFDLGHKPYIPGYIGLNNIKHNDHMNVI 191
Query: 207 IQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
I SL+ V PL ++ L+ + ++ LV RF L +KIW+ R FK QVSPHEFLQ V +A
Sbjct: 192 IHSLLHVPPLMDYLLLSKP-NGKQTELVRRFAALAKKIWNPRLFKSQVSPHEFLQEVNRA 250
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NTSIIYECFQGELEVVKEIPKNTISG 325
S +FR+ + +PVEF+ WLLN LH DL TKK N+S+I+ FQGEL +
Sbjct: 251 SGGKFRLEQKGDPVEFIGWLLNRLHKDLGGTKKRNSSVIFSTFQGELRL----------- 299
Query: 326 NDQNTEKGSDGGDDHDNI-----TTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLF 380
Q D G++ + +T+ PFL L +DLP PPLF+D +EKNIIPQ ++
Sbjct: 300 ETQQVLVRPDAGENAKPVFDLDRDIKTTVSPFLFLAVDLPAPPLFQDSVEKNIIPQASIY 359
Query: 381 NILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKN 440
++L K+DG+T E + RY+ RLP Y+ILH +RFTKNNF EKNPT+VNFP++
Sbjct: 360 SVLAKYDGQTTQEYLG---QVRRYKCQRLPPYVILHYKRFTKNNFVEEKNPTIVNFPLRG 416
Query: 441 LELKDYIPLPTPKENEKLRSKYDLIANIVHDG 472
L+LKD + P + + YDL+AN+ H+
Sbjct: 417 LDLKDIVDNPEAHPS----TTYDLLANVTHES 444
>gi|195555380|ref|XP_002077094.1| GD24862 [Drosophila simulans]
gi|194203112|gb|EDX16688.1| GD24862 [Drosophila simulans]
Length = 484
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 192/431 (44%), Positives = 265/431 (61%), Gaps = 57/431 (13%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR +LDFDFEK CS+SL+ +NVYACLVCGKY+QGRG +HAYTHS+ HH
Sbjct: 36 RVCPYLDTINRNLLDFDFEKLCSISLTRINVYACLVCGKYFQGRGTNTHAYTHSVGEAHH 95
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL T + YCLPD YEI D SL+DI++V
Sbjct: 96 VFLNLHTLRFYCLPDNYEIIDSSLDDIKYVLNPTFTRQEISKLDQLQPKHSRTVDGVLYL 155
Query: 193 ----GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGD-LTRKIWHA 247
GLNNIK D+ NV + +L V PLR++FL ++Y H P GD + +W+
Sbjct: 156 PGVVGLNNIKANDYCNVVLHALSHVGPLRDYFLQKQSYAHVMRPP----GDSVFTLMWNP 211
Query: 248 RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NTSIIYE 306
RNFK VSPHE LQAV+ S KRF+I Q +P++F+SW LNTLH L+ K+ N+SI+Y+
Sbjct: 212 RNFKSHVSPHEMLQAVVLWSSKRFQITEQGDPIDFLSWFLNTLHRALKGNKQPNSSILYK 271
Query: 307 CFQGELEV-VKEIP----KNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPP 361
F GE+++ ++IP + TE+ D +D + F+ L DLPP
Sbjct: 272 IFLGEMKIYTRKIPPVELDDAAKAKLLATEEYKDQVEDKN----------FIYLTCDLPP 321
Query: 362 PPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARM-RYRVTRLPKYMILHMRRF 420
PPLF D +NIIPQV L+ +L KF+G E M R+ +TRLP+++IL+++RF
Sbjct: 322 PPLFTDEFRENIIPQVNLYQLLSKFNGSAEKEYKTYKANFMKRFEITRLPQFIILYIKRF 381
Query: 421 TKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYR 480
TKN FF+EKNPT+VNFP+K+++ D + + ++ K +KY+L+ANIVHDG P+ G YR
Sbjct: 382 TKNTFFLEKNPTIVNFPIKHVDFGDILGMRQRDKDVK-DTKYNLVANIVHDGDPKKGTYR 440
Query: 481 VFVQRKSEELW 491
+ K+ W
Sbjct: 441 AHILHKANGQW 451
>gi|268530552|ref|XP_002630402.1| Hypothetical protein CBG04341 [Caenorhabditis briggsae]
Length = 626
Score = 360 bits (925), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 199/455 (43%), Positives = 267/455 (58%), Gaps = 53/455 (11%)
Query: 78 DKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACL 137
D+D DE + Q ++ R CPYLDT++R VLDFDFEK CSVSLS+ NVYAC+
Sbjct: 135 DEDGDEPVWSMKKAQAEKKS-----RTCPYLDTIDRSVLDFDFEKQCSVSLSHQNVYACM 189
Query: 138 VCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV----- 192
VCGKY+QGRG +HAYTH+LE HHV++NL+T K YCLPD YE+ DPSLEDI++V
Sbjct: 190 VCGKYFQGRGTNTHAYTHALETDHHVFLNLQTLKFYCLPDNYEVVDPSLEDIKYVLKPTY 249
Query: 193 ----------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE 224
GLNNIK D+ NV + +L V PLRN+FL
Sbjct: 250 TKEMIGSIDKQARMVRAQDDSTYFPGVVGLNNIKANDYCNVILHALSAVRPLRNWFLKES 309
Query: 225 NYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQS 277
NY K P L RFG+L RK+W+ R + VSPHE LQAV+ S K+F+ Q+
Sbjct: 310 NYLAVKRPPGDKLTLLPQRFGELIRKLWNPRALRTHVSPHEMLQAVVVCSNKKFQFIKQN 369
Query: 278 NPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGG 337
+ +FM +LL TLH+ L ++K SII + F+G + +E + I D EK
Sbjct: 370 DAYDFMLFLLTTLHAALNGSEKRESIISKTFRGRM---REYSRKVIPAEDTEEEKYRKMH 426
Query: 338 DDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRP 397
+ + S PFL L LDLP PL++DV +NIIPQVPL +L+KFDG+T E
Sbjct: 427 --LPDYQEKVSEKPFLFLTLDLPAAPLYRDVQLQNIIPQVPLSTLLEKFDGKTEKEYRTY 484
Query: 398 HVARM-RYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENE 456
+ M RY + +LP+++I+ +RF KN +FVEKNPT+VNFP+ N++L Y L E
Sbjct: 485 NDNIMKRYELLKLPEFLIISYKRFQKNQWFVEKNPTIVNFPIANVDL--YECLAEDVRAE 542
Query: 457 KLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+ YDL+AN+VH+G E G YR+ + + W
Sbjct: 543 HKYTTYDLVANVVHEGTFETGNYRIQIVHQGSGKW 577
>gi|353237014|emb|CCA68997.1| related to SAD1-SnRNP assembly defective [Piriformospora indica DSM
11827]
Length = 569
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 200/441 (45%), Positives = 274/441 (62%), Gaps = 51/441 (11%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCP-YLDTVNRQVLDFDFEKFCSVSL 128
R G D E++D+ +G +RL E +R YLDTVNR VLDFDFEK CSVSL
Sbjct: 67 RNGTSPDARAHEEDDEDEDGGNATPAARLKEEQRASDLYLDTVNRAVLDFDFEKVCSVSL 126
Query: 129 SNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLED 188
SN+N+YACLVCGKY+QGR + + A+ HS+ HHV+INL T +VY LPDGY+++DPSL+D
Sbjct: 127 SNINIYACLVCGKYFQGRSKLTPAFAHSIHDDHHVFINLETLQVYVLPDGYKVSDPSLDD 186
Query: 189 IR--------------------------------HVGLNNIKETDFVNVTIQSLMRVTPL 216
I ++GLNNIK D+ NV I +L+ V PL
Sbjct: 187 ISRVLAPKFTKESIAALSHPQTAFDLQNEPYAPGYIGLNNIKANDYANVIIHALLHV-PL 245
Query: 217 RNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQ 276
L+ NY + + L+ RF L +K+W++ FK QVSPHEFLQ V + S +F I Q
Sbjct: 246 IRDPLLASNYTNKSTQLLIRFATLAKKLWNSHLFKAQVSPHEFLQEVTRVSAGKFGIMKQ 305
Query: 277 SNPVEFMSWLLNTLHSDLRNTK-KNTSIIYECFQGELEVVKE--IPKNTISGNDQNTEKG 333
+PVEF+ WLLN LH D TK +N+S+IY FQGEL + + I K+ +SG+ N
Sbjct: 306 GDPVEFLGWLLNALHKDAGGTKRRNSSMIYSAFQGELRLDTQQVIVKDELSGH-VNARPE 364
Query: 334 SDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVME-KNIIPQVPLFNILKKFDGETVT 392
D + +++R PFL L +DLPPPPLF+D +E KNIIPQV ++ +L K+DG T
Sbjct: 365 FDIDRE-----IKSNRSPFLFLAIDLPPPPLFQDAIEAKNIIPQVSIYQVLAKYDGSTAQ 419
Query: 393 EVVRPHVARM-RYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPT 451
E +V ++ R++ RLP Y+ILH +RFTKNNF EKNPT+VNFP+K L+ ++Y+ +
Sbjct: 420 E----YVGQLKRFKCQRLPPYIILHFKRFTKNNFVEEKNPTIVNFPLKGLDFREYVDI-- 473
Query: 452 PKENEKLRSKYDLIANIVHDG 472
P E +K + Y+L+ANI H+
Sbjct: 474 PPEEKKFPTTYNLLANITHES 494
>gi|392570880|gb|EIW64052.1| cysteine proteinase [Trametes versicolor FP-101664 SS1]
Length = 524
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 185/403 (45%), Positives = 252/403 (62%), Gaps = 51/403 (12%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+NR VLDFDFEK CSVS SN+N+Y CLVCGKY+QGRG+ S+A+ H++ HHV+IN
Sbjct: 63 YLDTINRAVLDFDFEKVCSVSSSNINIYGCLVCGKYFQGRGRNSYAFAHAIHDDHHVFIN 122
Query: 167 LRTEKVYCLPDGYEINDPSLEDIR------------------------------------ 190
L T KVY LPDGY ++DPSLEDI
Sbjct: 123 LETTKVYVLPDGYPVSDPSLEDISFVLSPTFTQASTSTLSTPIHLQKPSYDLSNKSYVPG 182
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNF 250
++GLNNIK D++NV I SL+ V PLR+ L+ NYR +S L+ RF L +K+W+ R F
Sbjct: 183 YIGLNNIKRNDYLNVVIHSLLHVAPLRDHLLL-SNYRGKQSELLRRFAGLAKKLWNPRLF 241
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT-KKNTSIIYECFQ 309
K QVSPHEFLQ V +AS +F + Q +PVEF+ WLLN LH D+ T KKN+S+I+ FQ
Sbjct: 242 KSQVSPHEFLQEVNRASTGKFSLEKQGDPVEFLGWLLNRLHKDMGGTKKKNSSVIFSTFQ 301
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVM 369
GE+ + E + + + + E+ D +++ PFL L +DLPPPPLF+D +
Sbjct: 302 GEVRM--ETQQVLVRPDSETGERPRFDIDRE----LKSAVSPFLFLAVDLPPPPLFQDSV 355
Query: 370 EKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEK 429
EKNIIPQV + ++L K+DG+ E V R++ RLP Y++LH +RFTKN F EK
Sbjct: 356 EKNIIPQVSIQSVLAKYDGQKTQESVG---QLRRFKCQRLPPYIVLHFKRFTKNQFVEEK 412
Query: 430 NPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG 472
NPT+VNFP++ L+ ++Y+ P + + YDLIAN+ H+
Sbjct: 413 NPTVVNFPLRGLDFREYLDAPASHPS----TVYDLIANVTHES 451
>gi|403343237|gb|EJY70942.1| U4/U6.U5 tri-snRNP-associated protein 2 [Oxytricha trifallax]
Length = 497
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 191/436 (43%), Positives = 264/436 (60%), Gaps = 61/436 (13%)
Query: 115 VLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYC 174
+LDFD EK CSV+LSNLN+Y+CL CGKYYQG+G+ + AY HSLE H+V+INL+ KV+C
Sbjct: 1 MLDFDLEKQCSVTLSNLNIYSCLTCGKYYQGKGKTTQAYIHSLEQQHNVFINLQDSKVWC 60
Query: 175 LPDGYEINDPSLEDIRH---------------------------------VGLNNIKETD 201
LPD YE++D +L DI++ +GLNN+K+TD
Sbjct: 61 LPDNYEVDDAALNDIKYNLIPLYNQQLVDKLDSEPMIARALDGTQFYPGSLGLNNLKQTD 120
Query: 202 FVNVTIQSLMRVTPLRNFFLI----PENYRHC--KSPLVHRFGDLTRKIWHARNFKGQVS 255
FVNV IQSL RV PLR++ L EN K LV +F +L +KIW+ +NFKG VS
Sbjct: 121 FVNVIIQSLCRVKPLRDYCLFYNIHSENLSMADQKHLLVVKFAELIKKIWNPKNFKGHVS 180
Query: 256 PHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKN-----TSIIYECFQG 310
PHE LQA+ AS+KRF+IG Q +P++ +SWLLNT + DL + +K ++I + FQG
Sbjct: 181 PHELLQAISLASQKRFKIGEQKDPIQLLSWLLNTFNEDLHSQQKQKKLKGLNMIEKTFQG 240
Query: 311 ELEVVKEIPKNTISGNDQNTEKGSDGGDDHD-NITTETSRMPFLMLGLDLPPPPLFKDVM 369
ELE+ IPK N N S D D + + F L LDLP PLFK+
Sbjct: 241 ELEISSLIPKGKQDANFLNKLAVSKTNMDTDVQYEMKNQKTKFFFLALDLPTIPLFKEQN 300
Query: 370 EKNIIPQVPLFNILKKFDGETVTEVVRPHVA-RMRYRVTRLPKYMILHMRRFTKNNFFVE 428
+ IPQ+ L +LKK+DG++ E P A + ++R+ LPKY+I+H++RF KN++F E
Sbjct: 301 QLAAIPQIALMQLLKKYDGKSFIE--EPVTAIKKKFRILSLPKYLIIHVKRFNKNDYFTE 358
Query: 429 KNPTLVNFPVKNLELKDYIPLPTPKENE-------------KLRSKYDLIANIVHDGKPE 475
KNPT+VNFP+KNL+L +Y+ P ++++ K KYDLIANI+H+GK +
Sbjct: 359 KNPTIVNFPIKNLDLSEYLWSPIAQQHQNDGSNTLNDAQPTKETYKYDLIANIIHEGKHD 418
Query: 476 GGFYRVFVQRKSEELW 491
G YRV + K + W
Sbjct: 419 NGQYRVQIHHKPTDEW 434
>gi|308495270|ref|XP_003109823.1| hypothetical protein CRE_06606 [Caenorhabditis remanei]
gi|308244660|gb|EFO88612.1| hypothetical protein CRE_06606 [Caenorhabditis remanei]
Length = 634
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 190/430 (44%), Positives = 261/430 (60%), Gaps = 48/430 (11%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT++R VLDFDFEK CSVSLS+ NVYAC+VCGKY+QGRG +HAYTH+LE HH
Sbjct: 164 RTCPYLDTIDRSVLDFDFEKQCSVSLSHQNVYACMVCGKYFQGRGTNTHAYTHALETDHH 223
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL+T K YCLPD YE+ DPSLEDI++V
Sbjct: 224 VFLNLQTLKFYCLPDNYEVVDPSLEDIKYVLKPTYTKEMIASIDKQARMVRAYDDSTYFP 283
Query: 193 ---GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTR 242
GLNNIK D+ NV + +L V PLRN+FL NY K P L RFG+L R
Sbjct: 284 GVVGLNNIKANDYCNVILHALSAVRPLRNWFLKESNYLAIKRPPGDKLTLLPQRFGELIR 343
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTS 302
K+W+ R + VSPHE LQAV+ S K+++ Q++ +FM +LL TLH+ L ++K S
Sbjct: 344 KLWNPRALRTHVSPHEMLQAVVVCSNKKYQFIKQNDAYDFMLFLLTTLHTALNGSEKRES 403
Query: 303 IIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPP 362
II + F+G++ +E + I D + EK + S PFL L LDLP
Sbjct: 404 IISKTFRGKM---REYSRKVIPAEDTDEEKYMKMR--MPDYQERVSEKPFLFLTLDLPAA 458
Query: 363 PLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARM-RYRVTRLPKYMILHMRRFT 421
PL++DV +NIIPQVPL +L+KF+G+T E + M RY + +LP+++I+ +RF
Sbjct: 459 PLYRDVQLQNIIPQVPLSTLLEKFNGKTEKEYRTYNDNIMKRYELLKLPEFLIISYKRFQ 518
Query: 422 KNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRV 481
KN +FVEKNPT+VNFP+ N++L + + +N+ + YDL+AN+VH+G E G YR+
Sbjct: 519 KNQWFVEKNPTIVNFPIVNVDLYECLAEDARADNK--YTTYDLVANVVHEGTFETGNYRI 576
Query: 482 FVQRKSEELW 491
+ + W
Sbjct: 577 QIVHQGSGKW 586
>gi|393218241|gb|EJD03729.1| spindle pole body protein [Fomitiporia mediterranea MF3/22]
Length = 536
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 187/404 (46%), Positives = 254/404 (62%), Gaps = 53/404 (13%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDTVNR LDFDFEK CSV LSN+N+Y CLVCGKY+QGRG+ S+AY HS+ HHV+IN
Sbjct: 74 YLDTVNRAALDFDFEKVCSVCLSNINIYGCLVCGKYFQGRGRNSYAYAHSIHDDHHVFIN 133
Query: 167 LRTEKVYCLPDGYEINDPSLEDIR------------------------------------ 190
L T+KVY LPDGY ++DPSLEDI
Sbjct: 134 LDTKKVYVLPDGYIVSDPSLEDISFVLAPSFTPQSIASLSSPSHLTKLSYDLSNKPYLPG 193
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNF 250
+VGLNNIK D +NV I +L + PLR++ L+ + +S L+ RF L +K+W+ R F
Sbjct: 194 YVGLNNIKRHDHMNVIILALTHIPPLRDYLLL-SAFGGKESELLKRFAGLAKKLWNPRLF 252
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT-KKNTSIIYECFQ 309
K QVSPHEFLQ V +AS +FR+ Q +P EF+ WLLN LH D+ + KKN+SIIY FQ
Sbjct: 253 KNQVSPHEFLQEVGRASTGKFRLEEQGDPTEFLGWLLNRLHKDMGGSKKKNSSIIYSTFQ 312
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVM 369
GEL + E + + +++ + D T+T+ PFL L +DLPPPPLF+D +
Sbjct: 313 GELRM--ETQQVIVKPEGESSHRPQFDIDRE----TKTTTSPFLFLSVDLPPPPLFQDSV 366
Query: 370 EKNIIPQVPLFNILKKFDGETVTEVVRPHVARM-RYRVTRLPKYMILHMRRFTKNNFFVE 428
EKNIIPQV L ++L K+DG T E ++ ++ R++ RLP+Y+ILH +RFTKN F E
Sbjct: 367 EKNIIPQVSLASVLSKYDGRTTQE----YLGQLRRFKCQRLPRYLILHFKRFTKNIFVEE 422
Query: 429 KNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG 472
KNPT+VNFP++ ++ +Y+ P + + YDLIAN++H+
Sbjct: 423 KNPTIVNFPLRGVDFSEYLDAPPNHPS----TVYDLIANVIHES 462
>gi|451998697|gb|EMD91161.1| hypothetical protein COCHEDRAFT_1137659 [Cochliobolus
heterostrophus C5]
Length = 551
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 211/519 (40%), Positives = 283/519 (54%), Gaps = 83/519 (15%)
Query: 39 LLPLANTYDDDD--------EEEEYGGRGDSGAKVGQNGRTGEDDDEDKDE--------- 81
L PL YD E+EE +GA + D+DK +
Sbjct: 7 LEPLEEMYDAPSPAMKRPKVEDEEMEDSDTNGATSNGHLMAPRPQDQDKIDILEEAGALD 66
Query: 82 DEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGK 141
DEDD +R E YLDT+NR+VLDFDFEK CSV+LSN+NVYACLVCGK
Sbjct: 67 DEDDDEPAVAAPKRQSAPEAGYTDLYLDTINRKVLDFDFEKLCSVTLSNINVYACLVCGK 126
Query: 142 YYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV--------- 192
YYQGRG KS AY H+LE GHHVY+N+ T+KVY LP+GYE+ SL+DI+ V
Sbjct: 127 YYQGRGPKSQAYFHALEEGHHVYVNMETKKVYVLPEGYEVTSKSLDDIKFVVDPRMSKEE 186
Query: 193 ------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRH 228
G+NNIK D+ NV IQ+L V PLRN+F++ +
Sbjct: 187 VAKLDKEPKVSWDLSNREYIPGFVGMNNIKANDYFNVVIQALSHVVPLRNYFMLED--LS 244
Query: 229 CKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLN 288
+ L RF L RKIW+ R FK VSPHE LQ + S KRF + QS+PV+F+SW LN
Sbjct: 245 NRPQLAQRFSTLVRKIWNPRAFKTHVSPHELLQEIALRSSKRFTLTDQSDPVDFLSWFLN 304
Query: 289 TLHSDL--RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGD--DHDNIT 344
LH + TK ++SII + FQG L++ Q +D GD ++
Sbjct: 305 NLHLAVGGSRTKPHSSIIQKVFQGTLKI-----------EQQEITARADAGDRLRFEDAA 353
Query: 345 TETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRY 404
+T+ FL+L LDLP PLF+D +EKNIIPQVPL NIL K++G T E + R+RY
Sbjct: 354 VQTTTSHFLVLTLDLPAAPLFQDALEKNIIPQVPLVNILSKYNGVTPQEKSK---NRVRY 410
Query: 405 RVTR-LPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRS-KY 462
R+ LP Y++ +++RF+KN F E+NPT+V FPV +L++ Y+ P P + Y
Sbjct: 411 RLVHPLPPYLLFNIKRFSKNKFVSERNPTIVTFPVHSLDMSPYVE-PNPAHYPPGQPIWY 469
Query: 463 DLIANIVH----------DGKPEGGFYRVFVQRKSEELW 491
DL+ANI H +G+ E +RV V+ ++ + W
Sbjct: 470 DLVANITHEAVKKKDDSVEGELESKIWRVQVKDRARDEW 508
>gi|341881288|gb|EGT37223.1| hypothetical protein CAEBREN_03753 [Caenorhabditis brenneri]
Length = 632
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 197/455 (43%), Positives = 265/455 (58%), Gaps = 53/455 (11%)
Query: 78 DKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACL 137
D+D DE + Q ++ R CPYLDT++R VLDFDFEK CSVSLS+ NVYAC+
Sbjct: 141 DEDCDEPVWSMKKAQAEKKS-----RTCPYLDTIDRSVLDFDFEKQCSVSLSHQNVYACM 195
Query: 138 VCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV----- 192
VCGKY+QGRG +HAYTH+LE HHV++NL+T K YCLPD YE+ DPSLEDI++V
Sbjct: 196 VCGKYFQGRGTNTHAYTHALETDHHVFLNLQTLKFYCLPDNYEVVDPSLEDIKYVLKPTY 255
Query: 193 ----------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE 224
GLNNIK D+ NV + +L V PLRN+FL +
Sbjct: 256 TKEMIAAIDQQARMVRAYDDSTYFPGVVGLNNIKANDYCNVILHALSAVRPLRNWFLNEK 315
Query: 225 NYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQS 277
NY K P L RFG+L RK+W+ R + VSPHE LQAV+ SKKRF+ Q+
Sbjct: 316 NYLAIKRPPGDKLTLLPQRFGELIRKLWNPRALRTHVSPHEMLQAVVVCSKKRFQFIKQN 375
Query: 278 NPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGG 337
+ EF+++LL+TLH L + +II + F+G + +E + I D TE+
Sbjct: 376 DAHEFLAFLLDTLHRALNGKEDRQTIISKTFRGRM---REYSRKVIPAED--TEEDRYIK 430
Query: 338 DDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRP 397
+ PF L LDLP PL++DV +NIIPQVPL +L+KFDG T E
Sbjct: 431 ERMPEYQPTIKETPFNFLTLDLPAAPLYRDVQLQNIIPQVPLSTLLEKFDGRTEKEYRTY 490
Query: 398 HVARM-RYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENE 456
+ M RY + +LP+++I+ +RF KN +FVEKNPT+VNFP+ N++L Y L E
Sbjct: 491 NDNIMKRYELLKLPEFLIISYKRFQKNQWFVEKNPTIVNFPIANVDL--YECLAPDVRAE 548
Query: 457 KLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+ YDL+AN+VH+G E G YR+ + + W
Sbjct: 549 HTYTTYDLVANVVHEGTFEDGNYRIQIVHQGSGKW 583
>gi|341877318|gb|EGT33253.1| hypothetical protein CAEBREN_03779 [Caenorhabditis brenneri]
Length = 632
Score = 354 bits (908), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 197/455 (43%), Positives = 265/455 (58%), Gaps = 53/455 (11%)
Query: 78 DKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACL 137
D+D DE + Q ++ R CPYLDT++R VLDFDFEK CSVSLS+ NVYAC+
Sbjct: 141 DEDCDEPVWSMKKAQAEKKS-----RTCPYLDTIDRSVLDFDFEKQCSVSLSHQNVYACM 195
Query: 138 VCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV----- 192
VCGKY+QGRG +HAYTH+LE HHV++NL+T K YCLPD YE+ DPSLEDI++V
Sbjct: 196 VCGKYFQGRGTNTHAYTHALETDHHVFLNLQTLKFYCLPDNYEVVDPSLEDIKYVLKPTY 255
Query: 193 ----------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE 224
GLNNIK D+ NV + +L V PLRN+FL +
Sbjct: 256 TKEMIAAIDQQARMVRAYDDSTYFPGVVGLNNIKANDYCNVILHALSAVRPLRNWFLNEK 315
Query: 225 NYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQS 277
NY K P L RFG+L RK+W+ R + VSPHE LQAV+ SKKRF+ Q+
Sbjct: 316 NYLAIKRPPGDKLTLLPQRFGELIRKLWNPRALRTHVSPHEMLQAVVVCSKKRFQFIKQN 375
Query: 278 NPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGG 337
+ EF+++LL+TLH L + +II + F+G + +E + I D TE+
Sbjct: 376 DAHEFLAFLLDTLHRALNGKEDRQTIISKTFRGRM---REYSRKVIPAED--TEEDRYIK 430
Query: 338 DDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRP 397
+ PF L LDLP PL++DV +NIIPQVPL +L+KFDG T E
Sbjct: 431 ERMPEYQPTIKETPFNFLTLDLPAAPLYRDVQLQNIIPQVPLSTLLEKFDGRTEKEYRTY 490
Query: 398 HVARM-RYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENE 456
+ M RY + +LP+++I+ +RF KN +FVEKNPT+VNFP+ N++L Y L E
Sbjct: 491 NDNIMKRYELLKLPEFLIISYKRFQKNQWFVEKNPTIVNFPIANVDL--YECLAPDVRAE 548
Query: 457 KLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+ YDL+AN+VH+G E G YR+ + + W
Sbjct: 549 HTYTTYDLVANVVHEGTFEEGNYRIQIVHQGSGKW 583
>gi|336472371|gb|EGO60531.1| hypothetical protein NEUTE1DRAFT_75709 [Neurospora tetrasperma FGSC
2508]
gi|350294407|gb|EGZ75492.1| cysteine proteinase [Neurospora tetrasperma FGSC 2509]
Length = 560
Score = 353 bits (907), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 203/459 (44%), Positives = 281/459 (61%), Gaps = 63/459 (13%)
Query: 59 GDSGAKVGQ-NGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCP-------YLDT 110
G + KV Q NG G + +E KDE++DDL G ++ +R+ P YLDT
Sbjct: 49 GSNEEKVEQTNG--GNNSNEVKDEEDDDLEAGEEVEVKA---PIRQAAPTEGYDDLYLDT 103
Query: 111 VNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTE 170
++R VLDFDFEK CS+SLSN+NVYACLVCGKY+QGRG KSHAY H+L+ GHHVYIN+ T+
Sbjct: 104 IDRNVLDFDFEKLCSISLSNINVYACLVCGKYFQGRGPKSHAYFHALDEGHHVYINMSTQ 163
Query: 171 KVYCLPDGYEINDPSLEDIRHV---------------------------------GLNNI 197
KVY LP+GYE+ SL+DI++V G+NNI
Sbjct: 164 KVYVLPEGYEVKSKSLDDIKYVSDPRYTRQEVLDLDRKPHVSRTLLGKEYVPGFVGMNNI 223
Query: 198 KETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPH 257
KE D++NV +Q+L V+PLRNFFL+ E++ + LV R L RKIW+ R FK VSPH
Sbjct: 224 KENDYLNVIVQALSHVSPLRNFFLL-EDFSNAPE-LVKRTSILFRKIWNPRAFKSHVSPH 281
Query: 258 EFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGELEVV 315
E LQ + S K+F + QS+PVEF+SW LN LH L TK ++S+I FQG+L+V
Sbjct: 282 ELLQEISLRSNKKFTLTQQSDPVEFLSWFLNHLHLGLGGSKTKPHSSVIQHIFQGKLKVE 341
Query: 316 KEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIP 375
+ + DQ ++ ++ ++ + SR FL+L LDLPP PLF+D E+NIIP
Sbjct: 342 SQA---ITARADQVHDRLR--FEEAADVQSSVSR--FLLLTLDLPPAPLFQDEQERNIIP 394
Query: 376 QVPLFNILKKFDGETVTEVVRPHVARMRYRVTR-LPKYMILHMRRFTKNNFFVEKNPTLV 434
QVPL IL K++G T E+ + R RYR+ LP +++ H++RF+KN F E+NPT+V
Sbjct: 395 QVPLTTILAKYNGVTAQEL---NAQRKRYRLQHPLPPFLVFHIKRFSKNKFVSERNPTIV 451
Query: 435 NFPVKNLELKDYIPLPTPKENEKLRS-KYDLIANIVHDG 472
F +NL++ Y+ P P ++ YDL+AN+VH+
Sbjct: 452 TFDARNLDVSPYVE-PDPNSHQHGEPIWYDLVANVVHEA 489
>gi|336269902|ref|XP_003349711.1| hypothetical protein SMAC_07064 [Sordaria macrospora k-hell]
gi|380088850|emb|CCC13285.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 541
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 201/470 (42%), Positives = 280/470 (59%), Gaps = 53/470 (11%)
Query: 43 ANTYDDDDEEEEYGGRGDSGAKVGQNGRTGEDDDEDKDE---DEDDLANGYGQGQRSRLV 99
A+ ++ DE E + G N E +DE+ D+ DED+ +++
Sbjct: 37 ASAVENGDETREGSNEEKAEQTNGDNNNNAEVNDEEDDDLRADEDEEVEEKAPIRQAAPT 96
Query: 100 EVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEA 159
E D YLDT++R VLDFDFEK CS+SLSN+NVYACLVCGKY+QGRG KSHAY H+L+
Sbjct: 97 EGYDDL-YLDTIDRNVLDFDFEKLCSISLSNINVYACLVCGKYFQGRGPKSHAYFHALDE 155
Query: 160 GHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV--------------------------- 192
GHHVYIN+ T+KVY LP+GYE+ SL+DI++V
Sbjct: 156 GHHVYINMSTQKVYVLPEGYEVKSKSLDDIKYVSDPRYTRQEVMDLDRKPHLSRTLLGKE 215
Query: 193 ------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWH 246
G+NNIKE D++NV +Q+L V+PLRNFFL+ E++ + LV R L RKIW+
Sbjct: 216 YVPGFVGMNNIKENDYLNVIVQALSHVSPLRNFFLL-EDFSNAPE-LVKRTSILFRKIWN 273
Query: 247 ARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSII 304
R FK VSPHE LQ + S K+F + QS+PVEF+SW LN LH L TK ++S+I
Sbjct: 274 PRAFKSHVSPHELLQEISLRSNKKFTLTQQSDPVEFLSWFLNHLHLGLGGSKTKPHSSVI 333
Query: 305 YECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPL 364
FQG+L+V + + DQ ++ ++ ++ + SR FL+L LDLPP PL
Sbjct: 334 QHIFQGKLKVESQA---ITARADQVHDRLR--FEEATDVQSSVSR--FLLLTLDLPPAPL 386
Query: 365 FKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTR-LPKYMILHMRRFTKN 423
F+D E+NIIPQVPL IL K++G T E+ + R RYR+ LP +++ H++RF+KN
Sbjct: 387 FQDEQERNIIPQVPLTTILAKYNGVTAQEL---NAQRKRYRLQHPLPPFLVFHIKRFSKN 443
Query: 424 NFFVEKNPTLVNFPVKNLELKDYI-PLPTPKENEKLRSKYDLIANIVHDG 472
F E+NPT+V F +NL++ Y+ P P + YDL+AN+VH+
Sbjct: 444 KFVSERNPTIVTFDARNLDVSPYVEPDPNSQHQHGEPIWYDLVANVVHEA 493
>gi|189193545|ref|XP_001933111.1| U4/U6.U5 tri-snRNP-associated protein 2 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187978675|gb|EDU45301.1| U4/U6.U5 tri-snRNP-associated protein 2 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 546
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 214/510 (41%), Positives = 288/510 (56%), Gaps = 76/510 (14%)
Query: 37 NPLLPLANTYDDDDEEEEYGGRGDSGAKVGQNGRTGEDDDEDKDEDEDDLAN--GYGQGQ 94
+P + A D++ EE + G +G + + ED D + DDL + +
Sbjct: 18 SPAMKRARVEDEEMEELQSNGATSNGHVMSPRLQDQEDADLAEAGASDDLDDEPAIAAPK 77
Query: 95 RSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYT 154
R E YLDT+NR+VLDFDFEK CSV+LSN+NVYACLVCGKYYQGRG KS AY
Sbjct: 78 RQTAPEAGYADLYLDTINRKVLDFDFEKLCSVTLSNINVYACLVCGKYYQGRGPKSQAYF 137
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV---------------------- 192
H+LE GHHVY+N+ T+KVY LP+GYE+ SL+DI+ V
Sbjct: 138 HALEEGHHVYVNMETKKVYVLPEGYEVTSKSLDDIKFVVDPRMSKEEVAKLDKEPKVSWD 197
Query: 193 -----------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLT 241
G+NNIK D+ NV IQ+L V PLRN+F++ + K L RF L
Sbjct: 198 LSNREYIPGFVGMNNIKANDYFNVVIQALSHVVPLRNYFMLED--LSGKPQLAQRFSTLV 255
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKK 299
RKIW+ R FK VSPHE LQ + S KRF + QS+PV+F+SW LN LH + TK
Sbjct: 256 RKIWNPRAFKTHVSPHELLQEISLRSSKRFTLTNQSDPVDFLSWFLNNLHLAVGGSRTKP 315
Query: 300 NTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGD----DHDNITTETSRMPFLML 355
++SII + FQG L++ Q +D GD + + TE +R FL+L
Sbjct: 316 SSSIIQKVFQGRLKI-----------EQQEITARADAGDRLRFEDAAVQTEITR--FLVL 362
Query: 356 GLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYR-VTRLPKYMI 414
LDLP PLF+D +EKNIIPQVPL NIL K++G T E + R+RYR + LP Y++
Sbjct: 363 TLDLPAAPLFQDALEKNIIPQVPLVNILAKYNGVTPQEKSK---NRVRYRLLHPLPPYLL 419
Query: 415 LHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKE---NEKLRSKYDLIANIVH- 470
+++RF+KN F E+NPT+V FPV +L++ Y+ P PKE E + YDL+ANI H
Sbjct: 420 FNIKRFSKNKFVSERNPTIVTFPVHSLDMAPYVE-PNPKEYPPGEPIW--YDLVANITHE 476
Query: 471 ---------DGKPEGGFYRVFVQRKSEELW 491
+G+ E +RV V+ ++ E W
Sbjct: 477 AVKKKDDSVEGEQESKVWRVQVKDRAREEW 506
>gi|17533009|ref|NP_494298.1| Protein USP-39 [Caenorhabditis elegans]
gi|351061315|emb|CCD69090.1| Protein USP-39 [Caenorhabditis elegans]
Length = 602
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 196/455 (43%), Positives = 266/455 (58%), Gaps = 54/455 (11%)
Query: 80 DEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVC 139
DE +DD + Q + R CPYLDT++R VLDFDFEK CSVSLS+ NVYAC+VC
Sbjct: 114 DEHDDDPVWSMKKAQAEK---KSRMCPYLDTIDRSVLDFDFEKQCSVSLSHQNVYACMVC 170
Query: 140 GKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV------- 192
GKY+QGRG +HAYTH+LE HHV++NL+T K YCLPD YE+ DPSLEDI++V
Sbjct: 171 GKYFQGRGTNTHAYTHALETDHHVFLNLQTLKFYCLPDNYEVIDPSLEDIKYVLKPTYTK 230
Query: 193 --------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY 226
GLNNIK D+ N +Q+L V PLRN+FL NY
Sbjct: 231 EMIASIDKQSKMVRAYDDSTYFPGVVGLNNIKANDYCNAILQALSAVRPLRNWFLKESNY 290
Query: 227 RHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNP 279
K P L RFG+L RK+W+ R + VSPHE LQAV+ S K+F+ Q++
Sbjct: 291 TSIKRPPGDKLTLLPQRFGELIRKLWNPRALRTHVSPHEMLQAVVVCSNKKFQFIKQNDA 350
Query: 280 VEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSD-GGD 338
+FM +LL TLHS L T K SII + F+G + ++ + I D + EK
Sbjct: 351 ADFMLFLLTTLHSALNGTDKKPSIISKTFRGRM---RQYSRRVIPAEDTDEEKYMKLRMP 407
Query: 339 DHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE--VVR 396
++ E+ PFL L LDLP PL++DV +NIIPQVPL +L+KFDG+T E
Sbjct: 408 EYQEKVIES---PFLYLTLDLPSAPLYRDVQLQNIIPQVPLSTLLEKFDGKTEKEYPTYN 464
Query: 397 PHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENE 456
+ R+ + +LP ++I+ +RF KN +FVEKNPT+VNFP+ N++ D + + N
Sbjct: 465 DNNIMKRFELLQLPDFLIITYKRFQKNQWFVEKNPTIVNFPIANVDFYDCLA-KDARANH 523
Query: 457 KLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
K + YDL+AN+VH+G + G YR+ + + W
Sbjct: 524 KY-TTYDLVANVVHEGTFKDGNYRIQIVHEGSGKW 557
>gi|330914555|ref|XP_003296684.1| hypothetical protein PTT_06849 [Pyrenophora teres f. teres 0-1]
gi|311331025|gb|EFQ95191.1| hypothetical protein PTT_06849 [Pyrenophora teres f. teres 0-1]
Length = 545
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 218/522 (41%), Positives = 288/522 (55%), Gaps = 90/522 (17%)
Query: 39 LLPLANTYD-----------DDDEEEEYGGRGDSGAKVGQNGRTGEDDDEDKDE-----D 82
L PL YD +D+E EE G + + R + D D E D
Sbjct: 7 LEPLEEVYDAPSPAMKRVRVEDEEMEELQSNGATSNGHVMSPRPQDQQDADLAEAGASDD 66
Query: 83 EDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKY 142
+DD +R E YLDT+NR+VLDFDFEK CSV+LSN+NVYACLVCGKY
Sbjct: 67 QDDDEPAIAAPKRQTAPEAGYTDLYLDTINRKVLDFDFEKLCSVTLSNINVYACLVCGKY 126
Query: 143 YQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV---------- 192
YQGRG KS AY H+LE GHHVY+N+ T+KVY LP+GYE+ SL+DI+ V
Sbjct: 127 YQGRGPKSQAYFHALEEGHHVYVNMETKKVYVLPEGYEVTSKSLDDIKFVVDPRMSKEEV 186
Query: 193 -----------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHC 229
G+NNIK D+ NV IQ+L V PLRN+F++ +
Sbjct: 187 AKLDKEPKVSWDLSNREYIPGFVGMNNIKANDYFNVVIQALSHVVPLRNYFMLED--LSG 244
Query: 230 KSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNT 289
K L RF L RKIW+ R FK VSPHE LQ + S KRF + QS+PV+F+SW LN
Sbjct: 245 KPQLAQRFSTLVRKIWNPRAFKTHVSPHELLQEIALRSSKRFTLTDQSDPVDFLSWFLNN 304
Query: 290 LHSDL--RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGD----DHDNI 343
LH + TK ++SII + FQG L++ Q +D GD + +
Sbjct: 305 LHLAVGGSRTKPSSSIIQKVFQGRLKI-----------EQQEITARADAGDRLRFEDAAV 353
Query: 344 TTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMR 403
TE +R FL+L LDLP PLF+D +EKNIIPQVPL NIL K++G T E + R+R
Sbjct: 354 QTEITR--FLVLTLDLPAAPLFQDALEKNIIPQVPLVNILAKYNGVTPQEKSK---NRVR 408
Query: 404 YR-VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKE---NEKLR 459
YR + LP Y++ +++RF+KN F E+NPT+V FPV +L++ Y+ P PKE E +
Sbjct: 409 YRLLHPLPPYLLFNIKRFSKNKFVSERNPTIVTFPVHSLDMAPYVE-PNPKEYPPGEPIW 467
Query: 460 SKYDLIANIVH----------DGKPEGGFYRVFVQRKSEELW 491
YDL+ANI H +G+ E +RV V+ ++ E W
Sbjct: 468 --YDLVANITHEAVKKKDDSVEGEQESKVWRVQVKDRAREEW 507
>gi|256073829|ref|XP_002573230.1| family C19 non-peptidase homologue (C19 family) [Schistosoma
mansoni]
gi|360044721|emb|CCD82269.1| family C19 non-peptidase homologue (C19 family) [Schistosoma
mansoni]
Length = 577
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 199/468 (42%), Positives = 269/468 (57%), Gaps = 63/468 (13%)
Query: 79 KDEDEDDLANGYGQGQRSRLVEVR-RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACL 137
++ DE+ + G G + + R R CPYLDT+ R +LDFDFEK CSVSLS+LNVYACL
Sbjct: 36 EESDEEQVYTGNGAVYNDQNEDTRSRSCPYLDTIRRNMLDFDFEKLCSVSLSHLNVYACL 95
Query: 138 VCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH------ 191
+CGKY+QGRG +HAYTHS+ HHV++NL T + YCLPD YEI D SLEDI +
Sbjct: 96 ICGKYFQGRGNSTHAYTHSVSESHHVFLNLETRRFYCLPDDYEILDGSLEDITYLLNPTF 155
Query: 192 ---------------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE 224
VGLNNIK D+ NV +Q L ++PLRN+FL +
Sbjct: 156 STSEILTLDSYSKMVRAYNGLTYYPGVVGLNNIKANDYCNVILQMLSHISPLRNYFLDIK 215
Query: 225 NYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQS 277
N+ + S LV RF +L RK+W+ RNFK VSPHEFLQAV+ SKKRF+I Q
Sbjct: 216 NFENLPSVSGDQMMLLVQRFSELIRKLWNPRNFKTHVSPHEFLQAVVLCSKKRFQITEQG 275
Query: 278 NPVEFMSWLLNTLHSDLRN----------TKKNTSIIYECFQGELEVVKEIPKNTISGND 327
+ +EF+SWL+N + LR K SI+ +G++ + + + N
Sbjct: 276 DAIEFLSWLVNAIDKALRTKKIPCPKGAVNKTYKSIVSSTLRGKMRMYS---RKIMPVNM 332
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD 387
+ EK S D T S + F L DLPPPPL+ D ++NIIPQV L +L KF+
Sbjct: 333 TDEEKASLA--DSPEYMTTVSDINFFYLTCDLPPPPLYLDEFKENIIPQVSLATLLSKFN 390
Query: 388 GETVTEVVRPHVARM-RYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDY 446
G T E + + R+ + RLP Y+IL+M+RF KN F +EKNPT+VNFP+K++ D+
Sbjct: 391 GVTEKEYKTHRDSTLRRFELRRLPPYLILYMKRFVKNIFTLEKNPTIVNFPIKSI---DF 447
Query: 447 IPLPTPKENEKLR-SKYDLIANIVHDGKPE--GGFYRVFVQRKSEELW 491
L P+ K R + YDL+AN+VHDG P G +R+ + + W
Sbjct: 448 GELLAPEFRAKHRYTTYDLVANVVHDGPPTPGSGTHRIHLVHRGTGKW 495
>gi|358392285|gb|EHK41689.1| hypothetical protein TRIATDRAFT_32182 [Trichoderma atroviride IMI
206040]
Length = 546
Score = 351 bits (901), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 215/497 (43%), Positives = 288/497 (57%), Gaps = 75/497 (15%)
Query: 21 KVVEQSSPSPPRLGFENPLLPLANTYDDDDEEEEYGGRGDSGAKVGQNGRTGEDDDEDKD 80
++++ +SPS R + PLAN++D+ E+ G G+NG ED + D+
Sbjct: 12 ELLDIASPSSKRSRMGDFDSPLANSHDEAQSLEQDGE--------GRNG-DAEDANSDEF 62
Query: 81 EDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCG 140
+DE+D A+ QR + D YLDT++R VLDFDFEK CSVSLSN+NVYACLVCG
Sbjct: 63 DDEEDDASPMVAPQRQKGPADGYDDLYLDTIDRNVLDFDFEKLCSVSLSNINVYACLVCG 122
Query: 141 KYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV-------- 192
KY+QGRG KSHAY HSL+ HHV+INL T+KVY LPDGYE+ SL+DI++V
Sbjct: 123 KYFQGRGVKSHAYFHSLDEDHHVFINLETQKVYVLPDGYEVKSKSLDDIKYVSDPRYTKN 182
Query: 193 --------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY 226
G+NNIKE D++NV +Q+L V+PLRN+ L+ +
Sbjct: 183 EVIQLDRRANHVSWTLDGKQYTPGFVGINNIKENDYLNVVVQALSHVSPLRNYLLLEDFS 242
Query: 227 RHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWL 286
+ KS +V R L RKIW+ R FK VSPHE LQ + S KRF + QS+PVEF+SW
Sbjct: 243 K--KSEIVKRCSILFRKIWNPRAFKSHVSPHELLQEIALLSNKRFTLTNQSDPVEFLSWF 300
Query: 287 LNTLHSDL--RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGD-----D 339
LN LH L TK +S+I FQG+L+V Q +D GD +
Sbjct: 301 LNNLHLGLGGSKTKPGSSMIQRTFQGKLKV-----------ESQAITARADAGDRLRFEE 349
Query: 340 HDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHV 399
+ + R FL L LDLP PLF+D +EKNIIPQVPL IL K+DG+ E H
Sbjct: 350 AGEVKVDIVR--FLFLTLDLPSAPLFQDELEKNIIPQVPLSTILSKYDGKRAQE---HHA 404
Query: 400 ARMRYRVTR-LPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKE---N 455
R RYR+ LP Y++ H++RF++N F E+NPT+V F +NL++ Y+ P P E
Sbjct: 405 QRKRYRLLHPLPPYLMFHVKRFSQNKFVAERNPTIVTFDARNLDISPYVE-PNPNEWPVG 463
Query: 456 EKLRSKYDLIANIVHDG 472
E + YDL+AN+VH+
Sbjct: 464 EPIW--YDLVANVVHES 478
>gi|358335317|dbj|GAA29316.2| U4/U6.U5 tri-snRNP-associated protein 2 [Clonorchis sinensis]
Length = 617
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 200/473 (42%), Positives = 270/473 (57%), Gaps = 68/473 (14%)
Query: 73 EDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLN 132
++DDE + + + N G+ RSR CPYLDT++R +LDFDFEK CSVSLS+LN
Sbjct: 96 DEDDEVLEIKQGPVFNANGEDVRSR------SCPYLDTISRNMLDFDFEKLCSVSLSHLN 149
Query: 133 VYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH- 191
VYACLVCGKY+QGRG +HAYTHS+ GHHV++NL T + YCLPD YEI D SLEDI +
Sbjct: 150 VYACLVCGKYFQGRGTSTHAYTHSVSEGHHVFLNLETHRFYCLPDDYEIIDGSLEDITYL 209
Query: 192 --------------------------------VGLNNIKETDFVNVTIQSLMRVTPLRNF 219
VGLNNIK D+ NV +Q L V+PLR++
Sbjct: 210 LNPTFTSAEISSLDTNNRMVRAYNGLTYYQGVVGLNNIKANDYCNVILQMLAHVSPLRDY 269
Query: 220 FLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFR 272
FL NYR + LV RFG+L RK+W+ RNFK VSPHEFLQAV+ S+KRF+
Sbjct: 270 FLNAANYRGMSTTSSDQMHLLVQRFGELIRKLWNPRNFKTHVSPHEFLQAVVLCSRKRFQ 329
Query: 273 IGVQSNPVEFMSWLLNTLHSDLRNTKKNT----------SIIYECFQGELEVVKEIPKNT 322
Q + VEF+SWLLN L L + +T +++ +G + + +
Sbjct: 330 FTEQGDAVEFLSWLLNALDLALHRKRLSTKPGPKATPERTVVSRALRGTMRIHS---RKI 386
Query: 323 ISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNI 382
+ N EK + D+ T F L DLPPPPL+ D +++IIPQV L +
Sbjct: 387 MPVNMSEEEKATLA--DNPEYMPSTVETKFFYLTCDLPPPPLYLDEYKESIIPQVSLSTL 444
Query: 383 LKKFDGETVTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKN 440
L KF+G T E R V R R+ + RLP Y+IL+M+R KN F +EKNPT+VNFP+K+
Sbjct: 445 LAKFNGTTEKEYKTHRDSVMR-RFELRRLPPYLILYMKRIVKNIFTLEKNPTIVNFPIKS 503
Query: 441 LELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPE--GGFYRVFVQRKSEELW 491
++ + + P + + K + YDL+ANIVHDG P G +R+ + + W
Sbjct: 504 IDFGELLD-PECRAHHKY-TTYDLVANIVHDGPPTPGSGTHRIHLLHRGTNKW 554
>gi|84994334|ref|XP_951889.1| ubiquitin carboxyl-terminal hydrolase [Theileria annulata strain
Ankara]
gi|65302050|emb|CAI74157.1| ubiquitin carboxyl-terminal hydrolase, putative [Theileria
annulata]
Length = 578
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 181/422 (42%), Positives = 256/422 (60%), Gaps = 63/422 (14%)
Query: 104 DCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHV 163
+CPYL T+NR +LDFDFEK CS++LSN++VYACLVCGKY+QGRG+ ++ YTH+LE H++
Sbjct: 143 NCPYLGTINRHLLDFDFEKVCSITLSNVHVYACLVCGKYFQGRGKNTYCYTHALEECHYL 202
Query: 164 YINLRTEKVYCLPDGYEINDPSLEDIRH-------------------------------- 191
++NL +VYC+P+ Y ++D SL+DI+H
Sbjct: 203 FMNLEDCRVYCIPENYPVDDASLDDIKHFLKPVYTKKDVQTLSTQVIYGKALDGTDFIPG 262
Query: 192 -VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE-NYRHCKSPLVHRFGDLTRKIWHARN 249
+GLNN+K TD+ NV IQ + V PLRN FL+ + N P++ L RKI++ +N
Sbjct: 263 CIGLNNLKNTDYFNVIIQLICVVEPLRNLFLVFDVNRVQPPDPVIITLSQLIRKIFNVKN 322
Query: 250 FKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQ 309
FKG VSPHEF+Q+V + ++IGVQS+PV +SWLL +H L N S++ + F
Sbjct: 323 FKGIVSPHEFVQSVGIVTNGLYKIGVQSDPVSLLSWLLARIHQKLHNRNTKESVVTKTFG 382
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVM 369
GEL ++K + K ET R PF ML L +P P+FKD M
Sbjct: 383 GEL-LIKTLKKTR----------------------WETERQPFRMLSLTVPEAPIFKDSM 419
Query: 370 EKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEK 429
+ N IPQ +F +L K+DG VTE V + Y++++LPKY+IL ++RFTKNNFF+EK
Sbjct: 420 DSNAIPQAQIFELLSKYDG--VTETVNANGDVCTYKLSKLPKYLILIIKRFTKNNFFLEK 477
Query: 430 NPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEE 489
NPT+V+FP+KNL+LKDY+ +E + ++YDL NI H+GKP GG ++V V
Sbjct: 478 NPTIVSFPMKNLDLKDYV----TEEIKDSVTRYDLYCNICHEGKPTGGIFKVHVYHAPSG 533
Query: 490 LW 491
W
Sbjct: 534 NW 535
>gi|340522343|gb|EGR52576.1| predicted protein [Trichoderma reesei QM6a]
Length = 554
Score = 350 bits (899), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 198/439 (45%), Positives = 259/439 (58%), Gaps = 73/439 (16%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R VLDFDFEK CSVSLSN+NVYACLVCGKYYQGRG KSHAY HSL+ HHV+IN
Sbjct: 91 YLDTIDRNVLDFDFEKLCSVSLSNINVYACLVCGKYYQGRGVKSHAYFHSLDEDHHVFIN 150
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------- 192
L T+KVY LP+GYE+ SL+DI++V
Sbjct: 151 LETQKVYVLPEGYEVKSKSLDDIKYVSDPRYTKEEVIQLDRRRPNAVSWTLDGKEYTPGF 210
Query: 193 -GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
G+NNIKE D++NV +Q+L V+PLRN+FL+ + + KS LV R L RKIW+ R FK
Sbjct: 211 VGMNNIKENDYLNVVVQALSHVSPLRNYFLLEDFSK--KSELVKRCSILFRKIWNPRAFK 268
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQ 309
VSPHE LQ V S KRF + QS+PVEF+SW LN LH L TK +S+I FQ
Sbjct: 269 AHVSPHELLQEVALQSNKRFTLTHQSDPVEFLSWFLNNLHLGLGGSKTKPGSSMIQRTFQ 328
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDD---HDNITTETSRMPFLMLGLDLPPPPLFK 366
G+L+V Q +D GD + + + FL+L LDLP PLF+
Sbjct: 329 GKLKV-----------ESQAITARADAGDRLRFEEAAEVKVDVVRFLLLTLDLPSAPLFQ 377
Query: 367 DVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTR-LPKYMILHMRRFTKNNF 425
D +EKNIIPQVPL IL K+DG+ E H R RYR+ LP +++LH++RF++N F
Sbjct: 378 DELEKNIIPQVPLSTILSKYDGKRAQE---HHAQRKRYRLLHPLPPFLMLHVKRFSQNKF 434
Query: 426 FVEKNPTLVNFPVKNLELKDYIPLPTPKE---NEKLRSKYDLIANIVH----------DG 472
E+NPT+V F +NL++ Y+ P P E E + YDL+AN+VH D
Sbjct: 435 VAERNPTIVTFDARNLDVSPYVE-PNPNEWPVGEPIW--YDLVANVVHEAVRKRDDVADS 491
Query: 473 KPEGGFYRVFVQRKSEELW 491
E ++V ++ K+ + W
Sbjct: 492 GEEKKTWKVQLKNKATDEW 510
>gi|389751280|gb|EIM92353.1| spindle pole body protein [Stereum hirsutum FP-91666 SS1]
Length = 515
Score = 350 bits (899), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 183/405 (45%), Positives = 246/405 (60%), Gaps = 55/405 (13%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+NR +LDFDFEK CSV SN+N+Y CLVCGKY+QGRG+ S+AY HS+ HHV+IN
Sbjct: 65 YLDTINRAILDFDFEKVCSVCSSNINIYGCLVCGKYFQGRGRNSYAYAHSIHDDHHVFIN 124
Query: 167 LRTEKVYCLPDGYEINDPSLEDIR------------------------------------ 190
L T KVY LPDGY ++DPSLEDI
Sbjct: 125 LETTKVYVLPDGYLVSDPSLEDISFVLSPTFTPATVSTLSSPQHLSKPSYDLTSKPYFPG 184
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNF 250
++GLN+IK D++NV I SL+ V PLR+ L+ + +S + RF L++K+W+ R F
Sbjct: 185 YIGLNDIKRNDYMNVIIHSLLHVAPLRDHLLL-SRFDGKQSEFLKRFASLSKKVWNPRLF 243
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT-KKNTSIIYECFQ 309
K QVSPHEFLQ V ++S +FR+ Q +PVEF+ W+LN LH D+ T KKN+SII+ FQ
Sbjct: 244 KSQVSPHEFLQEVGRSSGGKFRLETQGDPVEFLGWMLNHLHKDMGGTKKKNSSIIFSSFQ 303
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTE--TSRMPFLMLGLDLPPPPLFKD 367
GE V+ + + D T G H +I E T+ PFL L +DLPPPPLF+D
Sbjct: 304 GE---VRMETQQVVVRPDAAT-----GARPHFDIDREIKTAASPFLFLAVDLPPPPLFQD 355
Query: 368 VMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFV 427
+EKNIIPQV + +L K+DG T E R++ RLP Y++LH +RFTKNNF
Sbjct: 356 AVEKNIIPQVGIHTVLAKYDGVTTQE---SRGQLRRFKCQRLPPYIVLHYKRFTKNNFVE 412
Query: 428 EKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG 472
EKNPT+VNFP++ ++ Y+ + + YDL+AN+ H+
Sbjct: 413 EKNPTIVNFPLRGVDFSPYV----DGSSSSPSTLYDLVANVTHES 453
>gi|164429365|ref|XP_958766.2| hypothetical protein NCU09547 [Neurospora crassa OR74A]
gi|38566856|emb|CAE76162.1| related to snRNP-associated protein [Neurospora crassa]
gi|157073452|gb|EAA29530.2| hypothetical protein NCU09547 [Neurospora crassa OR74A]
Length = 560
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 197/446 (44%), Positives = 276/446 (61%), Gaps = 61/446 (13%)
Query: 72 GEDD-DEDKDEDEDDLANGYGQGQRSRLVEVRRDCP-------YLDTVNRQVLDFDFEKF 123
GE++ +E KDE++DDL G ++ +R+ P YLDT++R VLDFDFEK
Sbjct: 60 GENNSNEVKDEEDDDLEAGEEVEVKA---PIRQAAPTEGYDDLYLDTIDRNVLDFDFEKL 116
Query: 124 CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEIND 183
CS+SLSN+NVYACLVCGKY+QGRG KSHAY H+L+ GHHVYIN+ T+KVY LP+GYE+
Sbjct: 117 CSISLSNINVYACLVCGKYFQGRGPKSHAYFHALDEGHHVYINMSTQKVYVLPEGYEVKS 176
Query: 184 PSLEDIRHV---------------------------------GLNNIKETDFVNVTIQSL 210
SL+DI++V G+NNIK+ D++NV +Q+L
Sbjct: 177 KSLDDIKYVSDPRYTRQEVLDLDRKPHVSRTLLGKEYVPGFVGMNNIKDNDYLNVIVQAL 236
Query: 211 MRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKR 270
V+PLRNFFL+ E++ + LV R L RKIW+ R FK VSPHE LQ + S K+
Sbjct: 237 SHVSPLRNFFLL-EDFSNAPE-LVKRTSILFRKIWNPRAFKSHVSPHELLQEISLRSNKK 294
Query: 271 FRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQ 328
F + QS+PVEF+SW LN LH L TK ++S+I FQG+L+V + + DQ
Sbjct: 295 FTLTQQSDPVEFLSWFLNHLHLGLGGSKTKPHSSVIQHIFQGKLKVESQA---ITARADQ 351
Query: 329 NTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDG 388
++ ++ ++ + SR FL+L LDLPP PLF+D E+NIIPQVPL IL K++G
Sbjct: 352 VHDRLR--FEEAADVQSSVSR--FLLLTLDLPPAPLFQDEQERNIIPQVPLTTILAKYNG 407
Query: 389 ETVTEVVRPHVARMRYRVTR-LPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYI 447
T E+ + R RYR+ LP +++ H++RF+KN F E+NPT+V F +NL++ Y+
Sbjct: 408 VTAQEL---NAQRKRYRLQHPLPPFLVFHIKRFSKNKFVSERNPTIVTFDARNLDVSPYV 464
Query: 448 PLPTPKENEKLRS-KYDLIANIVHDG 472
P P ++ YDL+AN+VH+
Sbjct: 465 E-PDPNSHQHGEPIWYDLVANVVHEA 489
>gi|358060680|dbj|GAA93619.1| hypothetical protein E5Q_00263 [Mixia osmundae IAM 14324]
Length = 668
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 190/433 (43%), Positives = 256/433 (59%), Gaps = 86/433 (19%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDTVNR VLDFDFE+ CSVSLS +NVYACLVCG+Y+QGRG+KS AY HS+ HHVYI+
Sbjct: 127 YLDTVNRAVLDFDFERLCSVSLSTINVYACLVCGRYFQGRGEKSQAYAHSIGEDHHVYIS 186
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRH---------------------------------VG 193
L + +VY LPD Y+++DPSL DIR+ VG
Sbjct: 187 LDSLRVYVLPDNYQVHDPSLNDIRYLLQPVFTTSVLTRLDNALLPSYDLAGRAYLPGFVG 246
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLI----------------------------PEN 225
LNNIK +NV +Q+LM V PLR++F++ P
Sbjct: 247 LNNIKANSHMNVVLQALMHVVPLRDYFILNSQPAAQGQISTVPPARDSPMPPSTDPGPSV 306
Query: 226 Y-RHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMS 284
+ R +S LV RFG L RK+W+ + FK QVSPH+FLQ V AS +F +P+EF+S
Sbjct: 307 FERDQRSELVQRFGTLCRKVWNPKMFKAQVSPHDFLQEVTLASGGKFSTTEPGDPLEFLS 366
Query: 285 WLLNTLHSDLRNT-KKNTSIIYECFQGELEVVKEIPKNTISGNDQN----TEKGSDGGDD 339
WLLN+LH DL + K+++SIIYE FQGE+ + DQ TE+GS+
Sbjct: 367 WLLNSLHRDLGGSRKRSSSIIYEAFQGEVRL-----------EDQAVLVMTEEGSEKPQF 415
Query: 340 HDNITTETSRMPFLMLGLDLPPPPLFKD-VMEKNIIPQVPLFNILKKFDGETVTEVVRPH 398
++ PFL L +DLP PPLF+D V EKNIIPQVP+ +IL K+DG T E
Sbjct: 416 DLARDIHGTKSPFLFLVIDLPAPPLFQDAVNEKNIIPQVPIADILAKYDGNTTVE----S 471
Query: 399 VARM-RYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEK 457
R+ RY++ RLP ++I+H +RFT NNF EKNPT+VN+P+K +++++YI + +
Sbjct: 472 AGRLRRYKLNRLPPFLIMHFKRFTSNNFVEEKNPTIVNYPLKGVDMEEYI--DSEAMQDD 529
Query: 458 LRSKYDLIANIVH 470
+ YDL+AN+ H
Sbjct: 530 FSTVYDLVANVTH 542
>gi|332813584|ref|XP_003309127.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Pan
troglodytes]
Length = 488
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 193/413 (46%), Positives = 253/413 (61%), Gaps = 55/413 (13%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREVDEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD 387
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+
Sbjct: 370 KEQLLHN---DEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFN 423
Query: 388 GETVTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPV 438
G T E + + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+
Sbjct: 424 GITEKEYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPI 475
>gi|426223529|ref|XP_004005927.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 2 [Ovis
aries]
Length = 488
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 193/413 (46%), Positives = 253/413 (61%), Gaps = 55/413 (13%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD 387
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+
Sbjct: 370 K---EQLLHNDEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFN 423
Query: 388 GETVTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPV 438
G T E + + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+
Sbjct: 424 GITEKEYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPI 475
>gi|402891450|ref|XP_003908959.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 2 [Papio
anubis]
Length = 488
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 193/413 (46%), Positives = 253/413 (61%), Gaps = 55/413 (13%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREVDEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD 387
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+
Sbjct: 370 KEQLLHN---DEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFN 423
Query: 388 GETVTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPV 438
G T E + + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+
Sbjct: 424 GITEKEYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPI 475
>gi|410955235|ref|XP_003984262.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 2 [Felis
catus]
Length = 488
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 193/413 (46%), Positives = 253/413 (61%), Gaps = 55/413 (13%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD 387
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+
Sbjct: 370 KEQLLHN---DEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFN 423
Query: 388 GETVTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPV 438
G T E + + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+
Sbjct: 424 GITEKEYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPI 475
>gi|376319201|ref|NP_001243655.1| U4/U6.U5 tri-snRNP-associated protein 2 isoform 2 [Homo sapiens]
gi|119619900|gb|EAW99494.1| ubiquitin specific peptidase 39, isoform CRA_c [Homo sapiens]
Length = 488
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 193/413 (46%), Positives = 253/413 (61%), Gaps = 55/413 (13%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREVDEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD 387
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+
Sbjct: 370 KEQLLHN---DEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFN 423
Query: 388 GETVTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPV 438
G T E + + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+
Sbjct: 424 GITEKEYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPI 475
>gi|403303110|ref|XP_003942187.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 2
[Saimiri boliviensis boliviensis]
Length = 488
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 193/413 (46%), Positives = 253/413 (61%), Gaps = 55/413 (13%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREIDEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD 387
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+
Sbjct: 370 KEQLLHN---DEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFN 423
Query: 388 GETVTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPV 438
G T E + + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+
Sbjct: 424 GITEKEYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPI 475
>gi|392573685|gb|EIW66824.1| hypothetical protein TREMEDRAFT_34460 [Tremella mesenterica DSM
1558]
Length = 540
Score = 348 bits (892), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 191/408 (46%), Positives = 253/408 (62%), Gaps = 54/408 (13%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGH 161
RRD YLDT+ RQ LDFDFE+ CS SLSN+NVYACLVCGKY+QGRG+ S AY H++ H
Sbjct: 69 RRDM-YLDTIARQNLDFDFERLCSKSLSNINVYACLVCGKYFQGRGRGSWAYRHAVGDNH 127
Query: 162 HVYINLRTEKVYCLPDGYEINDPSLEDIRHV----------------------------- 192
V++NL TEK Y LP+GY ++DPSL DI HV
Sbjct: 128 RVWLNLSTEKFYVLPEGYLVSDPSLNDIIHVLNPKYKSSDLAALSKLPSPCFTLNSTLYL 187
Query: 193 ----GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPEN--YRHCKSP--LVHRFGDLTRKI 244
GLNNIK D++NV + L+ V P+RNF L P + + P LV R L +++
Sbjct: 188 PGYIGLNNIKHNDYLNVILHLLLHVPPVRNFLLDPATPALKEDRRPTELVQRLSTLCKRL 247
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NTSI 303
W+ + FK Q+SPHEFLQ V K S +F++ Q +PVEF+ WL+NTLH DL TKK N+S+
Sbjct: 248 WNPQLFKAQISPHEFLQEVAKRSAGKFKMTEQGDPVEFLGWLVNTLHRDLGGTKKRNSSV 307
Query: 304 IYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPP 363
IY FQG++ +I + + + D G D +++ PFL L LDLPP P
Sbjct: 308 IYSTFQGKV----QIETQQVITHKEYARPVFDIGRDIQTVSS-----PFLFLALDLPPTP 358
Query: 364 LFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKN 423
LF D+ EK IIPQVPL IL KFDG+ +T+ P + R+ +T LP Y+ILH++RFTKN
Sbjct: 359 LFTDLNEKKIIPQVPLSTILAKFDGK-MTQEFGPTLK--RHHLTALPPYLILHIKRFTKN 415
Query: 424 NFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHD 471
NF EKNPT+VNFP++ +EL DY+ PK ++ L S YDL++N+ D
Sbjct: 416 NFVEEKNPTIVNFPLRGVELNDYV---DPKPSDPLHSVYDLLSNVTLD 460
>gi|403222446|dbj|BAM40578.1| ubiquitin carboxyl-terminal hydrolase [Theileria orientalis strain
Shintoku]
Length = 1027
Score = 348 bits (892), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 180/431 (41%), Positives = 257/431 (59%), Gaps = 63/431 (14%)
Query: 99 VEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLE 158
V + R CPYL T+NR +LDFDFEK CS++L+N++VYACLVCGKY+QGRG+ +H YTH+LE
Sbjct: 100 VSLERKCPYLGTINRHLLDFDFEKVCSITLTNIHVYACLVCGKYFQGRGKNTHCYTHALE 159
Query: 159 AGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH--------------------------- 191
H++++NL KVYC+P+ Y + D SL+DI++
Sbjct: 160 ECHYLFMNLEDCKVYCIPENYLVEDASLDDIKYFLKPSYTRKDVELLKTQVTYGKALDGT 219
Query: 192 ------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE-NYRHCKSPLVHRFGDLTRKI 244
+GLNN+K+TD+ NV IQ + VTPLR+ FL+ + N ++ L RKI
Sbjct: 220 DFIPGCIGLNNLKKTDYFNVIIQMMCVVTPLRDLFLLFDVNKVQPPDAVITTMVQLIRKI 279
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSII 304
++ RNFKG VSPHEF+Q+V AS ++IGVQS+P SWLL +H L+N S++
Sbjct: 280 FNTRNFKGIVSPHEFVQSVGVASNGVYKIGVQSDPASLFSWLLARIHQKLQNRNTKESVV 339
Query: 305 YECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPL 364
F GEL V T+ G +E R PF ML L +P P+
Sbjct: 340 TRAFGGELLV------KTLRGTRWESE-----------------RKPFRMLTLVVPEAPI 376
Query: 365 FKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNN 424
FKD M+ N IPQVP+F++L K+DG+ + + VA +Y++++LP+Y++L ++RFTKNN
Sbjct: 377 FKDSMDTNAIPQVPIFDLLAKYDGKMESVNTQGEVA--KYKLSKLPEYLVLVIKRFTKNN 434
Query: 425 FFVEKNPTLVNFPVKNLELKDYI----PLPTPKENEKLRSKYDLIANIVHDGKPEGGFYR 480
FF+EKNPT+V+FP+KNL+L +Y+ +KYDLI NI H+G P+GG ++
Sbjct: 435 FFLEKNPTIVSFPMKNLDLSEYMVEGGSQGGGNGGSGQSTKYDLICNISHEGTPKGGTFK 494
Query: 481 VFVQRKSEELW 491
V V W
Sbjct: 495 VQVYHTPSNNW 505
>gi|396457844|ref|XP_003833535.1| similar to U4/U6.U5 tri-snRNP-associated protein [Leptosphaeria
maculans JN3]
gi|312210083|emb|CBX90170.1| similar to U4/U6.U5 tri-snRNP-associated protein [Leptosphaeria
maculans JN3]
Length = 554
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 201/450 (44%), Positives = 267/450 (59%), Gaps = 81/450 (18%)
Query: 102 RRDCP-------YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYT 154
R+D P YLDT+NR+VLDFDFEK CSV+LSN+NVYACLVCGKYYQGRG KS AY
Sbjct: 91 RQDAPETGYTDLYLDTINRKVLDFDFEKLCSVTLSNINVYACLVCGKYYQGRGPKSQAYF 150
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV---------------------- 192
H+LE GHHVY+N+ T+KVY LP+GYE+ SL+DI+ V
Sbjct: 151 HALEEGHHVYVNMETKKVYVLPEGYEVKSKSLDDIKFVVDPRMTKSEVARLDKEPKVSWD 210
Query: 193 -----------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLT 241
G+NNIK D+ NV IQ+L V PLRN+F++ + + L RF L
Sbjct: 211 LSNREYIPGFVGMNNIKANDYFNVAIQALAHVVPLRNYFMLED--LSSRPQLAQRFSTLV 268
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKK 299
RKIW+ R FK VSPHE LQ + S KRF + QS+PV+F+SW LN LH + TK
Sbjct: 269 RKIWNPRAFKTHVSPHELLQEIALRSSKRFSLSEQSDPVDFLSWFLNNLHLAVGGSKTKP 328
Query: 300 NTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGD----DHDNITTETSRMPFLML 355
+SII + FQG L++ Q +D GD + + TETSR FL+L
Sbjct: 329 GSSIIQKVFQGTLKI-----------ESQEITARADAGDRLRFEDAAVKTETSR--FLIL 375
Query: 356 GLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYR-VTRLPKYMI 414
LDLP PLF+D +EKNIIPQVPL NIL K++G T E ++ R+RYR + LP Y++
Sbjct: 376 TLDLPSAPLFQDALEKNIIPQVPLVNILSKYNGVTPQEKMK---NRVRYRLLHPLPPYLL 432
Query: 415 LHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKE---NEKLRSKYDLIANIVH- 470
+++RF+KN F E+NPT+V FPV +L++ Y+ P PKE E + YDL+ANI H
Sbjct: 433 FNIKRFSKNKFVSERNPTIVTFPVHSLDMAPYVE-PNPKEYPPGEPIY--YDLVANITHE 489
Query: 471 ---------DGKPEGGFYRVFVQRKSEELW 491
+G+ E +RV ++ ++ + W
Sbjct: 490 AVKSRDDSVEGEQERRVWRVQLKDRARDEW 519
>gi|403417071|emb|CCM03771.1| predicted protein [Fibroporia radiculosa]
Length = 556
Score = 347 bits (890), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 190/442 (42%), Positives = 256/442 (57%), Gaps = 75/442 (16%)
Query: 92 QGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSH 151
+G R R R YLDT+NR VLDFDFEK CSVSLSN+N+Y CLVCGKY+QGRG+ S+
Sbjct: 51 RGPRRRAEPPRASDMYLDTINRAVLDFDFEKVCSVSLSNINIYGCLVCGKYFQGRGRNSY 110
Query: 152 AYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIR--------------------- 190
AY H++ HHV+INL + KVY LPDGY ++DPSLEDI
Sbjct: 111 AYAHAIHEDHHVFINLESTKVYVLPDGYLVSDPSLEDISFVLAPSFTSASIEGLSSPSFI 170
Query: 191 ---------------HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVH 235
++GLN+IK D++NV I SL+ V PLR+ LI N+ +S L+
Sbjct: 171 QKPSYDLSSKPYIPGYIGLNDIKRNDYMNVIIHSLLHVQPLRDHLLI-SNFHGKESELLK 229
Query: 236 RFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR 295
RF L +K+W+ R FK QVSPHEFLQ V +AS +F +G Q +PVEF+ WLLN LH D+
Sbjct: 230 RFASLAKKVWNPRLFKSQVSPHEFLQEVGRASAGKFSLGSQGDPVEFLGWLLNRLHKDMG 289
Query: 296 NTKKN-------------------------TSIIYECFQGELEVVKEIPKNTISGNDQNT 330
TKK T +I+ FQG++ + E + + + +
Sbjct: 290 GTKKKNSSTCSIYLAVLDSREPACAKDRVRTGVIFSTFQGQVRM--ETQQVVVRPDLGDN 347
Query: 331 EKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGET 390
EK D T PFL L +DLPPPPLF+D +EKNIIPQV ++++L K+DG T
Sbjct: 348 EKPRFDIDREIKSTVS----PFLFLAVDLPPPPLFQDAVEKNIIPQVGIYSVLTKYDGRT 403
Query: 391 VTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLP 450
E R++ +LP Y+IL+ +RFTKN F EKNPT+VNFP++ L+L++++ P
Sbjct: 404 TQESAG---QLRRFKCQQLPPYVILNFKRFTKNIFVEEKNPTIVNFPLRGLDLREFLDAP 460
Query: 451 TPKENEKLRSKYDLIANIVHDG 472
P + L YDLIAN+ H+
Sbjct: 461 -PSHSPTL---YDLIANVTHES 478
>gi|358389617|gb|EHK27209.1| hypothetical protein TRIVIDRAFT_62978 [Trichoderma virens Gv29-8]
Length = 551
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 215/490 (43%), Positives = 285/490 (58%), Gaps = 72/490 (14%)
Query: 26 SSPSPPRLGFENPLLPLANTYDDDDEEEEYGGRGDSGAKVGQNGRTGEDDDEDKDEDEDD 85
+SP+ R + PLAN++DD E+ G +NGR ED+D + +DEDD
Sbjct: 17 ASPASKRSRMGDLDSPLANSHDDAQSLEQDGD--------ARNGRP-EDEDSEGFDDEDD 67
Query: 86 LANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQG 145
A+ ++S + D YLDT++R VLDFDFEK CSVSLSN+NVYACLVCGKY+QG
Sbjct: 68 EAHMTAPVRQSGPADGYDDL-YLDTIDRNVLDFDFEKLCSVSLSNINVYACLVCGKYFQG 126
Query: 146 RGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV------------- 192
RG KSHAY HSL+ HHVYINL T+KVY LP+GYE+ SL+DI++V
Sbjct: 127 RGVKSHAYFHSLDEDHHVYINLETQKVYVLPEGYEVKSKSLDDIKYVSDPRYTKNEVIQL 186
Query: 193 ---------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKS 231
G+NNIKE D++NV +Q+L V+PLRN+ L+ + + KS
Sbjct: 187 DRRVNHVSWTLDGKEYTPGFVGMNNIKENDYLNVVVQALSHVSPLRNYLLLEDFSK--KS 244
Query: 232 PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH 291
LV R L RKIW+ R FK VSPHE LQ + S KRF + QS+PVEF+SW LN LH
Sbjct: 245 ELVKRCSILFRKIWNPRAFKSHVSPHELLQEIALLSNKRFTLTNQSDPVEFLSWFLNNLH 304
Query: 292 SDL--RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDD---HDNITTE 346
L TK +S+I FQG+L+V Q +D GD + +
Sbjct: 305 LGLGGSKTKPGSSMIQRTFQGKLKV-----------ESQAITARADAGDRLRFEEAAEVK 353
Query: 347 TSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYR- 405
+ FL L LDLP PLF+D +EKNIIPQVPL IL K+DG+ E H R RYR
Sbjct: 354 VDIVRFLFLTLDLPSAPLFQDELEKNIIPQVPLSTILSKYDGKRAQE---HHAQRKRYRL 410
Query: 406 VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKE---NEKLRSKY 462
+ LP +++LH++RF++N F E+NPT+V F +NL++ Y+ P P E E + Y
Sbjct: 411 LHPLPPFLLLHVKRFSQNKFVSERNPTIVTFDARNLDVSPYVE-PNPNEWPVGEPIW--Y 467
Query: 463 DLIANIVHDG 472
DL+AN+VH+
Sbjct: 468 DLVANVVHEA 477
>gi|145507031|ref|XP_001439476.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406660|emb|CAK72079.1| unnamed protein product [Paramecium tetraurelia]
Length = 447
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 184/431 (42%), Positives = 254/431 (58%), Gaps = 63/431 (14%)
Query: 99 VEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLE 158
V+ + CPY+ T+ R +LDFDFEK CSV+LSNLNVY CL+CGKYYQG+ + AY HSLE
Sbjct: 9 VKYNQQCPYIATICRHMLDFDFEKLCSVTLSNLNVYVCLICGKYYQGKSINTQAYIHSLE 68
Query: 159 AGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH--------------------------- 191
HH+++NL+ K+YCLPD YE+ D SLEDI++
Sbjct: 69 QDHHLFMNLQNTKIYCLPDNYEVVDHSLEDIQYNLDPKFNNLKELDDNVEESRALDGTTF 128
Query: 192 ----VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP------LVHRFGDLT 241
VGLNN+ ++D+ NV +Q+L R+ PLRNF + + + P L RF +LT
Sbjct: 129 LPGFVGLNNLSKSDYFNVVMQALCRIKPLRNFMIFLQFQKSATEPFDYNCLLSQRFSELT 188
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNT 301
RKIW+ RN+KG VSPHE LQAV S K+F+IG QS+P+ + W L+ L +L + K
Sbjct: 189 RKIWNPRNYKGHVSPHELLQAVTLKSNKQFKIGQQSDPMHLIIWFLDNLKKELLHINKIN 248
Query: 302 SIIYECFQGELEVVKEIP-KNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLP 360
+II +CFQGEL+ P KN I G I + S F L LDLP
Sbjct: 249 TIISDCFQGELQYEWYKPLKNAI-------------GYQPIPIIEQKS---FFYLSLDLP 292
Query: 361 PPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRF 420
PL KD +K +IP + + ++KK+DG T T+ R RY +T+ PKY+I+HM+RF
Sbjct: 293 STPLQKDGSQKALIPSISIQELIKKYDGFTNTDSAD---GRRRYTITKFPKYLIIHMKRF 349
Query: 421 TKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYR 480
KNNFF+EKNPT+V FP+ +L+L + L E+ KY+LIANI H+G + G Y+
Sbjct: 350 IKNNFFMEKNPTIVTFPLNDLDLSQCLNL------EQQNVKYNLIANICHEGTAKVGIYK 403
Query: 481 VFVQRKSEELW 491
+ V+ ++ W
Sbjct: 404 IHVKNEANNQW 414
>gi|451848874|gb|EMD62179.1| hypothetical protein COCSADRAFT_147685 [Cochliobolus sativus
ND90Pr]
Length = 548
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 204/472 (43%), Positives = 270/472 (57%), Gaps = 76/472 (16%)
Query: 71 TGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSN 130
G DDED DE +R E YLDT+NR+VLDFDFEK CSV+LSN
Sbjct: 62 AGALDDEDGDEP------AVAAPKRQSAPEAGYTDLYLDTINRKVLDFDFEKLCSVTLSN 115
Query: 131 LNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIR 190
+NVYACLVCGKYYQGRG KS AY H+LE GHHVY+N+ T+KVY LP+GYE+ SL+DI+
Sbjct: 116 INVYACLVCGKYYQGRGPKSQAYFHALEEGHHVYVNMETKKVYVLPEGYEVTSKSLDDIK 175
Query: 191 HV---------------------------------GLNNIKETDFVNVTIQSLMRVTPLR 217
V G+NNIK D+ NV IQ+L V PLR
Sbjct: 176 FVVDPRMSKEEVAKLDKEPKVSWDLSNREYIPGFVGMNNIKANDYFNVVIQALSHVVPLR 235
Query: 218 NFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQS 277
N+F++ + + L RF L RKIW+ R FK VSPHE LQ + S KRF + QS
Sbjct: 236 NYFMLED--LSNRPQLAQRFSTLVRKIWNPRAFKTHVSPHELLQEIALRSSKRFTLTDQS 293
Query: 278 NPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSD 335
+PV+F+SW LN LH + TK ++SII + FQG L++ Q +D
Sbjct: 294 DPVDFLSWFLNNLHLAVGGSRTKPHSSIIQKVFQGTLKI-----------EQQEITARAD 342
Query: 336 GGD--DHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE 393
GD ++ +T+ FL+L LDLP PLF+D +EKNIIPQVPL NIL K++G T E
Sbjct: 343 AGDRLRFEDAAVQTTTSHFLVLTLDLPAAPLFQDALEKNIIPQVPLVNILSKYNGVTPQE 402
Query: 394 VVRPHVARMRYR-VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTP 452
+ R+RYR + LP Y++ +++RF+KN F E+NPT+V FPV +L++ Y+ P P
Sbjct: 403 KSK---NRVRYRLLHPLPPYLLFNIKRFSKNKFVAERNPTIVTFPVHSLDMSPYVE-PNP 458
Query: 453 KE---NEKLRSKYDLIANIVH----------DGKPEGGFYRVFVQRKSEELW 491
E E + YDL+ANI H +G+ E +RV V+ ++ E W
Sbjct: 459 AEYPPGEPIW--YDLVANITHEAVKKKDDSVEGELESKIWRVQVKDRAREEW 508
>gi|393238227|gb|EJD45765.1| cysteine proteinase [Auricularia delicata TFB-10046 SS5]
Length = 602
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 186/403 (46%), Positives = 244/403 (60%), Gaps = 54/403 (13%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDTVNR LDFDFEK CSV LSN+++Y CLVCGKY+QGRG+ S+AY HS+ HHV+IN
Sbjct: 128 YLDTVNRNALDFDFEKLCSVCLSNIHIYGCLVCGKYFQGRGKSSYAYAHSVHEDHHVFIN 187
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------- 192
L T KVY LPDGY ++DPSL+DI HV
Sbjct: 188 LETGKVYVLPDGYLVSDPSLDDIGHVLNPRFTPQSIKYLSSPVHLQTPSYDLSRKPYIPG 247
Query: 193 --GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNF 250
GLNNIK D +NV I +L+ V PLR+F L+ + + LV RF L +K+W+ R F
Sbjct: 248 FVGLNNIKRNDHLNVVIHALLHVAPLRDFLLLSQFDGGKQPELVKRFAALAKKLWNPRLF 307
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NTSIIYECFQ 309
K QVSPHEFLQ V++ S+ RFRI +P EF+ WLLN LH D+ +KK N+SIIY FQ
Sbjct: 308 KAQVSPHEFLQEVVRVSQGRFRITELGDPAEFLGWLLNRLHIDMGGSKKRNSSIIYRTFQ 367
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVM 369
GEL + + + N D +I T+ PFL L LDLP PPLF+D
Sbjct: 368 GELRLETQ----QVKVNKDLFGVARPQFDIDRDIKKTTT--PFLWLALDLPAPPLFQDGE 421
Query: 370 EKNIIPQVPLFNILKKFDGETVTEVVRPHVARM-RYRVTRLPKYMILHMRRFTKNNFFVE 428
+KNI+PQV L ++L K+DG T E + ++ RY++T LP Y++LH +RFTKNNF E
Sbjct: 422 DKNIVPQVTLASVLAKYDGNTTQE----NAGQLKRYKLTALPPYIVLHYKRFTKNNFVEE 477
Query: 429 KNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHD 471
KNPT+VNFP++ ++ +Y+ + YDL+ANI H+
Sbjct: 478 KNPTIVNFPLRGVDFAEYL------DAAGGPQAYDLLANITHE 514
>gi|380480497|emb|CCF42398.1| ubiquitin carboxyl-terminal hydrolase [Colletotrichum higginsianum]
Length = 535
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 187/408 (45%), Positives = 247/408 (60%), Gaps = 61/408 (14%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R VLDFDFEK CSVSLSN+NVYACLVCG+YYQGRG KSHAY H+L+ HHV+IN
Sbjct: 83 YLDTIDRNVLDFDFEKLCSVSLSNINVYACLVCGRYYQGRGPKSHAYFHALDENHHVFIN 142
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------- 192
++T+KVY LP+GYE+N SL+DI+ V
Sbjct: 143 MQTQKVYVLPEGYEVNSKSLDDIKFVSDPRYTRQEVAALDKPPLRASFTLVGKEYAPGFV 202
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKG 252
G+NN+KE D++NV +Q+L V PLRNF L+ + +S L RFG L RKIW+ R FK
Sbjct: 203 GMNNLKENDYLNVVVQALAHVVPLRNFCLLED--LSSRSELAKRFGILVRKIWNPRAFKA 260
Query: 253 QVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQG 310
VSPHE LQ + S KR+ + QS+PVEF+SW LN LH L TK +S++ FQG
Sbjct: 261 HVSPHELLQEISLLSNKRYTLTAQSDPVEFLSWFLNNLHLGLGGSKTKAGSSVVQRIFQG 320
Query: 311 ELEVVKEIPKNTISGNDQNTEKGSDGGD----DHDNITTETSRMPFLMLGLDLPPPPLFK 366
+L+V Q +D GD + ++ TSR F+ L LDLP PLF+
Sbjct: 321 KLKV-----------ESQAITARADAGDRLRFEDAAVSVTTSR--FMFLTLDLPAAPLFQ 367
Query: 367 DVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVA-RMRYRVTR-LPKYMILHMRRFTKNN 424
D +EKNIIPQVPL IL K+DG E H+A R RYR+ LP Y++LH++RF++N
Sbjct: 368 DELEKNIIPQVPLTTILSKYDGIHAQE----HLAQRKRYRLLHPLPPYLVLHVKRFSQNK 423
Query: 425 FFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG 472
F E+NPT+V F + L++ Y+ T + YDL+AN+VH+
Sbjct: 424 FVSERNPTIVTFDPRGLDVSPYVEPNTSEWPPGEPIWYDLVANVVHEA 471
>gi|405123054|gb|AFR97819.1| biquitin thiolesterase/zinc ion binding protein [Cryptococcus
neoformans var. grubii H99]
Length = 562
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 188/409 (45%), Positives = 251/409 (61%), Gaps = 54/409 (13%)
Query: 101 VRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAG 160
RRD YLDT++RQ LDFDFEK CS SLSN+NVYACLVCGKY+QGRG+ S AY H++
Sbjct: 78 TRRDM-YLDTISRQSLDFDFEKLCSKSLSNINVYACLVCGKYFQGRGKGSWAYRHAVGDN 136
Query: 161 HHVYINLRTEKVYCLPDGYEINDPSLEDIRHV---------------------------- 192
H V++NL TEK Y LP+GY ++DPSL DI V
Sbjct: 137 HRVWLNLDTEKFYVLPEGYPVSDPSLNDILRVLHPRYNASDIKALSALPAPSYTLSGQQY 196
Query: 193 -----GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPEN--YRHCKSP--LVHRFGDLTRK 243
G+NNIK+ D+ NV I L+ V PLRNF L P + + P LV RF L R+
Sbjct: 197 TPGFIGVNNIKKNDYCNVVIHLLLHVPPLRNFLLNPNTPELQEERRPTELVKRFATLARR 256
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NTS 302
+W++ FK Q+SPHEFLQ V K S +F+ Q +PVE + WL+NTLH DL +KK N+S
Sbjct: 257 LWNSHLFKSQISPHEFLQEVSKRSNGKFKTTEQGDPVELLGWLVNTLHRDLGGSKKRNSS 316
Query: 303 IIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPP 362
IIY FQG++++ + + + + D G D I++ PFL L LDLP
Sbjct: 317 IIYSTFQGKVQIETQ----QVIVHKEYARPVFDIGRDIQTISS-----PFLFLALDLPIT 367
Query: 363 PLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTK 422
PLF D+ EK IIPQVPL IL KFDG+T E + R+ +T LP Y+ILH++RFTK
Sbjct: 368 PLFTDMNEKKIIPQVPLSQILAKFDGKTTQEF---GPSLKRHHLTSLPPYLILHIKRFTK 424
Query: 423 NNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHD 471
NNF E+NPT+VNFP++ +E+ DY+ PK ++ + ++YDL++N+ D
Sbjct: 425 NNFVEERNPTIVNFPLRGVEMSDYV---DPKPSDPMHTQYDLLSNVFLD 470
>gi|58264574|ref|XP_569443.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134109995|ref|XP_776383.1| hypothetical protein CNBC5990 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259057|gb|EAL21736.1| hypothetical protein CNBC5990 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57225675|gb|AAW42136.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 562
Score = 344 bits (883), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 188/409 (45%), Positives = 252/409 (61%), Gaps = 54/409 (13%)
Query: 101 VRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAG 160
RRD YLDT++RQ LDFDFEK CS SLSN+NVYACLVCGKY+QGRG+ S AY H++
Sbjct: 78 TRRDM-YLDTISRQSLDFDFEKLCSKSLSNINVYACLVCGKYFQGRGKGSWAYRHAVGDN 136
Query: 161 HHVYINLRTEKVYCLPDGYEINDPSLEDIRHV---------------------------- 192
H V++NL TEK Y LP+GY ++DPSL DI V
Sbjct: 137 HRVWLNLDTEKFYVLPEGYPVSDPSLNDILRVLHPRYNASDIKALSTLPAPSYTLSGQQY 196
Query: 193 -----GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPEN--YRHCKSP--LVHRFGDLTRK 243
G+NNIK+ D+ NV I L+ V PLRNF L P+ + + P LV RF L R+
Sbjct: 197 TPGFIGVNNIKKNDYCNVVIHLLLHVPPLRNFLLNPDTPELQDDRRPTELVKRFATLARR 256
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NTS 302
+W++ FK Q+SPHEFLQ V K S +F+ Q +PVE + WL+NTLH DL +KK N+S
Sbjct: 257 LWNSHLFKSQISPHEFLQEVSKRSNGKFKTTEQGDPVELLGWLVNTLHRDLGGSKKRNSS 316
Query: 303 IIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPP 362
IIY FQG++++ + + + + D G D I++ PFL L LDLP
Sbjct: 317 IIYSTFQGKVQIETQ----QVIVHKEYARPVFDIGRDIQTISS-----PFLFLALDLPIT 367
Query: 363 PLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTK 422
PLF D+ EK IIPQVPL IL KFDG+T E + R+ +T LP Y+ILH++RFTK
Sbjct: 368 PLFTDMNEKKIIPQVPLSQILAKFDGKTTQEF---GPSLKRHHLTSLPPYLILHIKRFTK 424
Query: 423 NNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHD 471
NNF E+NPT+VNFP++ +E+ DY+ PK ++ + ++YDL++N+ D
Sbjct: 425 NNFVEERNPTIVNFPLRGVEMSDYV---DPKPSDPMHTQYDLLSNVFLD 470
>gi|328771476|gb|EGF81516.1| hypothetical protein BATDEDRAFT_10470 [Batrachochytrium
dendrobatidis JAM81]
Length = 506
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 208/450 (46%), Positives = 281/450 (62%), Gaps = 65/450 (14%)
Query: 80 DEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVC 139
DE+ D+++N +G+ R L + YLDT+NR LDFDFEK CSVSLSNLNVYACLVC
Sbjct: 51 DEETDEVSNKHGKRIRQDLRGL-----YLDTINRARLDFDFEKLCSVSLSNLNVYACLVC 105
Query: 140 GKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV------- 192
GKY+QG G S+AY HS+ HHV+IN+ T VY LP+ Y+++D SL DI++V
Sbjct: 106 GKYFQGIGVSSNAYYHSMGENHHVFINMDTLNVYVLPELYKVDDLSLNDIKYVIKPTFTE 165
Query: 193 --------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY 226
GLNNIKE D++NV +QS V LR++FL+ ++
Sbjct: 166 KDVEMLNKLSIHSYDLNNKMYIPGFVGLNNIKENDYINVIVQSFAHVELLRDYFLLDKS- 224
Query: 227 RHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWL 286
+S LV RFG L RK+W++R FKGQVSPHE +Q + S KRF++G Q++P +F+SWL
Sbjct: 225 -DSQSELVKRFGLLLRKMWNSRAFKGQVSPHELIQEISNVSDKRFKLGEQADPAQFLSWL 283
Query: 287 LNTLHSDLRNTKKN-TSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITT 345
+N LH L + K N +SI+ + FQGEL V+ P T DQ T G + +N+
Sbjct: 284 INKLHLGLCSKKSNKSSIMQQAFQGEL-YVESRPFIT----DQET-----GESNINNLGD 333
Query: 346 ET-SRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRY 404
T S +PF L LDLPPPPLF D EKNIIPQ+PL +L+KF+G +V E A M Y
Sbjct: 334 ATVSTLPFWFLTLDLPPPPLFSDEAEKNIIPQIPLTTLLEKFNGTSVCETGS---AVMTY 390
Query: 405 RVTRLPKYMILHMRRFTKNNF-FVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYD 463
++ +LP+Y+I +RF+KNN+ EKNPT+VNFP+KNL++ DY+ + E R YD
Sbjct: 391 KIQKLPRYLIFSFKRFSKNNWNAFEKNPTIVNFPIKNLDMADYV-----QGGESAR--YD 443
Query: 464 LIANIVHDGKP--EGGFYRVFVQRKSEELW 491
LIANI H+GKP G Y+V + K++ W
Sbjct: 444 LIANICHEGKPGTGNGAYKVHLLSKAKSQW 473
>gi|310794303|gb|EFQ29764.1| ubiquitin carboxyl-terminal hydrolase [Glomerella graminicola
M1.001]
Length = 535
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 189/411 (45%), Positives = 249/411 (60%), Gaps = 67/411 (16%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R VLDFDFEK CSVSLSN+NVYACLVCG+YYQGRG KSHAY H+L+ HHV+IN
Sbjct: 83 YLDTIDRNVLDFDFEKLCSVSLSNINVYACLVCGRYYQGRGPKSHAYFHALDENHHVFIN 142
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------- 192
++T+KVY LP+GYE+ SL+DI+ V
Sbjct: 143 MQTQKVYVLPEGYEVKSKSLDDIKFVSDPRYTKQEVAVLDKPPMRASFTLAGKEYAPGFV 202
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKG 252
G+NN+KE D++NV +Q+L V PLRNF L+ + +S L RFG L RKIW+ R FK
Sbjct: 203 GMNNLKENDYLNVVVQALAHVAPLRNFCLLED--LSSRSELAKRFGILVRKIWNPRAFKA 260
Query: 253 QVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQG 310
VSPHE LQ + S KR+ + QS+PVEF+SW LN LH L TK +S++ FQG
Sbjct: 261 HVSPHELLQEISLLSNKRYTLTAQSDPVEFLSWFLNNLHLGLGGSKTKPGSSVVQRIFQG 320
Query: 311 ELEVVKEIPKNTISGNDQNTEKGSDGGD----DHDNITTETSRMPFLMLGLDLPPPPLFK 366
+L+V Q +D GD + ++ TSR F+ L LDLP PLF+
Sbjct: 321 KLKV-----------ESQAITARADAGDRLRFEDAAVSMTTSR--FMFLTLDLPAAPLFQ 367
Query: 367 DVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVA-RMRYRVTR-LPKYMILHMRRFTKNN 424
D +EKNIIPQVPL IL K+DG E H+A R RYR+ LP Y++LH++RF++N
Sbjct: 368 DELEKNIIPQVPLTTILAKYDGIHAQE----HLAQRKRYRLLHPLPPYLVLHVKRFSQNK 423
Query: 425 FFVEKNPTLVNFPVKNLELKDYIPLPTPKE---NEKLRSKYDLIANIVHDG 472
F E+NPT+V F + L++ Y+ P P E E + YDL+AN+VH+
Sbjct: 424 FVSERNPTIVTFDPRGLDVSPYVE-PNPGEWPPGEPIW--YDLVANVVHEA 471
>gi|46124823|ref|XP_386965.1| hypothetical protein FG06789.1 [Gibberella zeae PH-1]
Length = 534
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 186/405 (45%), Positives = 248/405 (61%), Gaps = 56/405 (13%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R VLDFDFEK CSVSLSN+NVYACLVCGKY+QGRG KSHAY HSL+ HHVYIN
Sbjct: 78 YLDTIDRNVLDFDFEKLCSVSLSNINVYACLVCGKYFQGRGPKSHAYFHSLDEDHHVYIN 137
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------G 193
L +++VY LP+GYE+ +LEDI++V G
Sbjct: 138 LESQRVYVLPEGYEVKSRALEDIKYVADPRYTKKEVIEMDRTRRTSQTLDAKEYIPGFVG 197
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIKE D+ NV +Q+L V PLRN+ L+ E++ K+ LV R L RKIW+ R FK
Sbjct: 198 MNNIKENDYFNVVVQALAHVAPLRNYLLL-EDF-SSKTELVKRASILVRKIWNPRAFKAH 255
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGE 311
VSPHE LQ + S KRF + +QS+PV+F+SW LN LH L TK +S+I FQG+
Sbjct: 256 VSPHELLQEISLRSNKRFNLTLQSDPVDFLSWFLNNLHIGLGGSKTKPGSSMIQRTFQGK 315
Query: 312 LEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEK 371
+++ + D+ + +D + + R FL+L LDLP PLF+D +EK
Sbjct: 316 MKIESQAITARADATDRLRFEDAD-------VKVDIVR--FLLLTLDLPSTPLFQDELEK 366
Query: 372 NIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTR-LPKYMILHMRRFTKNNFFVEKN 430
NIIPQVPL IL K+DG+ E H R RYR+ LP Y+ H++RF++N F E+N
Sbjct: 367 NIIPQVPLTTILTKYDGQRAQE---HHAQRKRYRLMHPLPPYLAFHVKRFSQNKFVSERN 423
Query: 431 PTLVNFPVKNLELKDYIPLPTPKE---NEKLRSKYDLIANIVHDG 472
PT+V F +NL++ Y+ P PKE E + YDL+AN+VH+
Sbjct: 424 PTIVTFDARNLDMSPYVE-PNPKEWPPGEPIW--YDLVANVVHEA 465
>gi|346974195|gb|EGY17647.1| U4/U6.U5 tri-snRNP-associated protein [Verticillium dahliae
VdLs.17]
Length = 549
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 186/409 (45%), Positives = 250/409 (61%), Gaps = 63/409 (15%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R VLDFDFEK CS+SLSN+NVYACLVCG+Y+QGRG KSHAY H+L+ GHHVYIN
Sbjct: 92 YLDTIDRNVLDFDFEKLCSISLSNINVYACLVCGRYFQGRGPKSHAYFHALDEGHHVYIN 151
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------G 193
++T+ VY LP+GYE+ SL+DI++V G
Sbjct: 152 MQTQNVYVLPEGYEVKSKSLDDIKYVSDPRYTKQEVMELDRRAQPAWTLAGKEYAPGFVG 211
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NN+KE D++NV +Q+L V PLRN+FL+ E++ +S L R L RKIW+ R FK
Sbjct: 212 MNNLKENDYLNVILQALSHVVPLRNYFLL-EDF-SSRSELAKRTSILVRKIWNPRAFKAH 269
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGE 311
VSPHE LQ + S KRF + QS+P+EF+SW LN LH L TK +S+I+ FQG+
Sbjct: 270 VSPHELLQQIALDSNKRFTLTNQSDPIEFLSWFLNNLHLGLGGSKTKPGSSMIHRIFQGK 329
Query: 312 LEVVKEIPKNTISGNDQNTEKGSDGGD-----DHDNITTETSRMPFLMLGLDLPPPPLFK 366
L+V Q +D GD D ++ SR FL+L LDLP PLF+
Sbjct: 330 LKV-----------ESQAITARADAGDRLRFEDAADVHVAVSR--FLLLTLDLPAAPLFQ 376
Query: 367 DVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVA-RMRYRVTR-LPKYMILHMRRFTKNN 424
D +NIIPQVPL IL K+DG E H+A R RYR+ LP Y+++H++RF++N
Sbjct: 377 DENNRNIIPQVPLTTILAKYDGRHAQE----HLAQRKRYRLLHPLPPYLVMHVKRFSQNK 432
Query: 425 FFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRS-KYDLIANIVHDG 472
F E+NPT+V F +NL++ Y+ P P E+ YDL+AN+VH+
Sbjct: 433 FVSERNPTIVTFDARNLDMAPYVE-PNPAEHPPGEPIWYDLVANVVHEA 480
>gi|322696197|gb|EFY87993.1| U4/U6.U5 tri-snRNP-associated protein 2 [Metarhizium acridum CQMa
102]
Length = 543
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 187/405 (46%), Positives = 252/405 (62%), Gaps = 55/405 (13%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++RQVLDFDFEK CS+SLSN+NVYACLVCGKY+QGRG KSHAY H+L+ HHV+IN
Sbjct: 81 YLDTIDRQVLDFDFEKLCSISLSNINVYACLVCGKYFQGRGPKSHAYFHALDEDHHVFIN 140
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------G 193
L T+KVY LP+GYE+ SL+DI++V G
Sbjct: 141 LETQKVYVLPEGYEVKSKSLDDIKYVSDPRYTKREVMSLDRSHHKSWTLAGKEYTPGFVG 200
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIKE D++NV +Q+L V PLRN+FL+ E++ + LV R L RKIW+ R FK
Sbjct: 201 MNNIKENDYLNVIVQALSHVPPLRNYFLL-EDFTKT-TELVKRCSILFRKIWNPRAFKAH 258
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGE 311
VSPHE LQ + S KRF + QS+PVEF+SW LN LH L +K +S+I FQG
Sbjct: 259 VSPHELLQEIALRSNKRFTLTTQSDPVEFLSWFLNNLHLGLGGSRSKPGSSMIQRTFQGR 318
Query: 312 LEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEK 371
L+V + I+ T++ ++ + + R FL+L LDLP PLF+D +E+
Sbjct: 319 LKVESQ----AITARADATDRLR--FEEAAQVKVDIVR--FLLLTLDLPAAPLFQDELER 370
Query: 372 NIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTR-LPKYMILHMRRFTKNNFFVEKN 430
NIIPQVPL IL K+DG++ E H R RYR+ LP Y+I H++RF++N F E+N
Sbjct: 371 NIIPQVPLTTILSKYDGKSAQE---HHAQRKRYRLLHPLPPYLIFHVKRFSQNKFVSERN 427
Query: 431 PTLVNFPVKNLELKDYIPLPTPKE---NEKLRSKYDLIANIVHDG 472
PT+V F +NL++ Y+ P P E +E + YDL+AN+VH+
Sbjct: 428 PTIVTFDARNLDVSPYVE-PNPAEWPASEPIW--YDLVANVVHEA 469
>gi|116206416|ref|XP_001229017.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88183098|gb|EAQ90566.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 552
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 204/460 (44%), Positives = 269/460 (58%), Gaps = 72/460 (15%)
Query: 57 GRGDSGAKVGQNGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVL 116
G +G G+ G T E DED+ E++ + R D YLDT++R VL
Sbjct: 42 GDEQNGTIGGEEGETDEFSDEDEVEEKAPI--------RQSAPTAGYDDLYLDTIDRNVL 93
Query: 117 DFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLP 176
DFDFEK CS++LSN+NVYACLVCGKY+QGRG KSHAY H+LE HHV+IN+ T+KVY LP
Sbjct: 94 DFDFEKLCSITLSNINVYACLVCGKYFQGRGPKSHAYFHALEEDHHVFINMSTQKVYVLP 153
Query: 177 DGYEINDPSLEDIRHV---------------------------------GLNNIKETDFV 203
+GYE+ SL+DI++V G+NNIKE D++
Sbjct: 154 EGYEVTSKSLDDIKYVSDPRYTRQEVTELDRKPHTSWTLGGKEYAPGFVGMNNIKENDYL 213
Query: 204 NVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAV 263
NV +Q+L V PLRN+FL+ E++ LV R L RKIW+ R FK VSPHE LQ +
Sbjct: 214 NVVVQALSHVAPLRNYFLL-EDFTSAPE-LVKRTSILFRKIWNPRAFKSHVSPHELLQEI 271
Query: 264 MKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGELEVVKEIPKN 321
S KRF + QS+PVEF+SW LN LH L TK +S I FQG+L+V E
Sbjct: 272 SLRSNKRFTLTAQSDPVEFLSWFLNHLHLGLGGSKTKPGSSPIQRIFQGKLKV--ESQSI 329
Query: 322 TISGNDQNT----EKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQV 377
T G+ N E+ SD T+ +R FL+L LDLPP PLF+D E+NIIPQV
Sbjct: 330 TARGDGLNDRLRFEEASDA-------KTDIAR--FLLLTLDLPPAPLFQDEQERNIIPQV 380
Query: 378 PLFNILKKFDGETVTEVVRPHVARMRYRVTR-LPKYMILHMRRFTKNNFFVEKNPTLVNF 436
PL IL K++G T E+ + R RYR+ LP ++ILH++RF++N F E+NPT+V F
Sbjct: 381 PLATILAKYNGVTGQEL---NAQRKRYRLMHPLPPFLILHIKRFSQNKFVSERNPTIVTF 437
Query: 437 PVKNLELKDYI-PLPT---PKENEKLRSKYDLIANIVHDG 472
+NL++ Y+ P P P E YDL+AN+VH+
Sbjct: 438 DPRNLDVSPYVEPDPAHCPPGEP----VWYDLVANVVHEA 473
>gi|452819224|gb|EME26289.1| ubiquitin thiolesterase/ zinc ion binding protein [Galdieria
sulphuraria]
Length = 451
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 171/424 (40%), Positives = 265/424 (62%), Gaps = 53/424 (12%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R+CPY+DT++R VLDFD+EK C V+L NVYACLVCGKY+QGRG K+ A+ H++E HH
Sbjct: 17 RECPYMDTIDRTVLDFDYEKLCCVTLERHNVYACLVCGKYFQGRGPKTPAFAHAIEYDHH 76
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
++I+L TEKVYCLP+ Y++ DP+LEDI+ V
Sbjct: 77 LFIHLETEKVYCLPENYQVVDPTLEDIKAVLNPRLDKAQVEELDKRIVKFRTLEGKIRYQ 136
Query: 193 ---GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRH--CKSPLVHRFGDLTRKIWHA 247
G++N++ TD++NV +Q+L+R+ PLR+FFL+ + + + PL+ FG+ RK W+
Sbjct: 137 GVLGMSNLQATDYINVILQALVRIKPLRDFFLLYQMDKQDTIEHPLIASFGEFMRKFWNP 196
Query: 248 RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYEC 307
R F+ Q+SPHE +Q ++K SKKRF I Q NPVEF++W L++L DL + ++
Sbjct: 197 RPFRSQISPHELVQEIVKRSKKRFPILQQGNPVEFLAWFLHSLQDDLMRAGQK-PLMKNT 255
Query: 308 FQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKD 367
F+G++E+ T N++++++ I + FL L L+LPP PLFKD
Sbjct: 256 FEGQMEI------ETFQANEKSSQQL---------IKKDHKLSQFLFLSLELPPMPLFKD 300
Query: 368 VMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFV 427
+E+N+IPQV L ++L +F + + V+ + RYR+ RLP +IL M+RF K+NF
Sbjct: 301 SLERNMIPQVSLASLLSRFVQQELHHDVQTGHS-YRYRLRRLPYCLILVMKRFVKSNFVW 359
Query: 428 EKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKS 487
EKN ++V+FP+++L++ +Y+ + P E YDL A ++HDGKP+GG YR +++ K+
Sbjct: 360 EKNISIVHFPIRDLDMTEYLSMSCPG-IESNGVVYDLTAVVIHDGKPKGGTYRCYIRHKA 418
Query: 488 EELW 491
+ W
Sbjct: 419 SDSW 422
>gi|301117246|ref|XP_002906351.1| U4/U6.U5 tri-snRNP-associated protein, putative [Phytophthora
infestans T30-4]
gi|262107700|gb|EEY65752.1| U4/U6.U5 tri-snRNP-associated protein, putative [Phytophthora
infestans T30-4]
Length = 493
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 194/477 (40%), Positives = 263/477 (55%), Gaps = 127/477 (26%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGH 161
RR CPYLDTVN Q+LDFDFEK CS+SLS+ NVYACLVCGKY+QGRG+ +HA+THS+++ H
Sbjct: 27 RRKCPYLDTVNHQLLDFDFEKVCSISLSDQNVYACLVCGKYFQGRGRNTHAFTHSVQSSH 86
Query: 162 HVYINLRTEKVYCLPDGYEINDPSLEDIR------------------------------- 190
HV+INL+T+++YCLPD YE+ D +L+ ++
Sbjct: 87 HVFINLQTDRIYCLPDNYEVVDNTLKPVQDALRPRFEETQIAQLDQNRILAQDAFGVSYL 146
Query: 191 --HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHAR 248
+GLNN+K TD++NV +Q+L V PLR+FFL KS LV RFG+L RK+W
Sbjct: 147 PGFIGLNNLKHTDYINVVVQALAHVPPLRDFFL-ANKMGKVKSKLVLRFGELLRKMWSPH 205
Query: 249 NFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NTSIIYEC 307
NFK +SPHE +Q + S L T K +SII++C
Sbjct: 206 NFKNTISPHELVQEI----------------------------SGLGGTHKPGSSIIHKC 237
Query: 308 FQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKD 367
FQG +EV + +D+ SD + ++T S PFLM+ LDLP PLFKD
Sbjct: 238 FQGFVEV---------TTDDETKVASSDPAERESAVSTTVS--PFLMMALDLPSTPLFKD 286
Query: 368 VMEKNIIPQVPLFNILKKFDGETVTEVVR-PHVARMRYRVTRLPKYMILHMRRFTKNNFF 426
NIIPQ+PLF +L+K++G +T V++ H + YR+ LP ++I H++RFT+NNFF
Sbjct: 287 SQGGNIIPQIPLFTVLEKYNGSHITHVLQGSHRLKKTYRIDSLPAFLIFHVKRFTRNNFF 346
Query: 427 VEKNPTLVNFPVKNLELKDYIPL--PTPKENE-------KLRS----------------- 460
+EKNPT+VNFPVKNLEL+DY+ L P E E +LRS
Sbjct: 347 IEKNPTIVNFPVKNLELRDYLKLDQSLPSEEELREKSISELRSLLRKHNQSTEDCVEKSD 406
Query: 461 -------------KYDLIANIVHD-----GKPEG--------GFYRVFVQRKSEELW 491
K++L+ANI HD G+ G YRV VQ ++ E W
Sbjct: 407 LVEKILRVTQPCTKFNLVANICHDSPVTTGQEAALQTNPLTEGSYRVHVQNRATEQW 463
>gi|408388380|gb|EKJ68066.1| hypothetical protein FPSE_11877 [Fusarium pseudograminearum CS3096]
Length = 534
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 186/405 (45%), Positives = 247/405 (60%), Gaps = 56/405 (13%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R VLDFDFEK CSVSLSN+NVYACLVCGKY+QGRG KSHAY HSL+ HHVYIN
Sbjct: 78 YLDTIDRNVLDFDFEKLCSVSLSNINVYACLVCGKYFQGRGPKSHAYFHSLDEDHHVYIN 137
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------G 193
L +++VY LP+GYE+ +LEDI++V G
Sbjct: 138 LESQRVYVLPEGYEVKSRALEDIKYVADPRYTKKEVIEMDRTRRTSQTLDAKEYIPGFVG 197
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIKE D+ NV +Q+L V PLRN+ L+ E++ K+ LV R L RKIW+ R FK
Sbjct: 198 MNNIKENDYFNVVVQALAHVAPLRNYLLL-EDF-SSKTELVKRASILVRKIWNPRAFKAH 255
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGE 311
VSPHE LQ + S KRF + QS+PV+F+SW LN LH L TK +S+I FQG+
Sbjct: 256 VSPHELLQEISLRSNKRFNLTSQSDPVDFLSWFLNNLHLGLGGSKTKPGSSMIQRTFQGK 315
Query: 312 LEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEK 371
+++ + D+ + +D + + R FL+L LDLP PLF+D +EK
Sbjct: 316 MKIESQAITARADATDRLRFEDAD-------VKVDIVR--FLLLTLDLPSTPLFQDELEK 366
Query: 372 NIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTR-LPKYMILHMRRFTKNNFFVEKN 430
NIIPQVPL IL K+DG+ E H R RYR+ LP Y+ H++RF++N F E+N
Sbjct: 367 NIIPQVPLTTILTKYDGQRAQE---HHAQRKRYRLMHPLPPYLAFHVKRFSQNKFVSERN 423
Query: 431 PTLVNFPVKNLELKDYIPLPTPKE---NEKLRSKYDLIANIVHDG 472
PT+V F +NL++ Y+ P PKE E + YDL+AN+VH+
Sbjct: 424 PTIVTFDARNLDMSPYVE-PNPKEWPPGEPIW--YDLVANVVHEA 465
>gi|322703747|gb|EFY95351.1| U4/U6.U5 tri-snRNP-associated protein 2 [Metarhizium anisopliae
ARSEF 23]
Length = 544
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 186/405 (45%), Positives = 251/405 (61%), Gaps = 55/405 (13%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++RQVLDFDFEK CS+SLSN+NVYACLVCGKY+QGRG KSHAY H+L+ HHV+IN
Sbjct: 81 YLDTIDRQVLDFDFEKLCSISLSNINVYACLVCGKYFQGRGPKSHAYFHALDEDHHVFIN 140
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------G 193
L T+KVY LP+GYE+ SL+DI++V G
Sbjct: 141 LETQKVYVLPEGYEVKSKSLDDIKYVSDPRYTKREVMSLDRAHHKSWTLAGKEYTPGFVG 200
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIKE D++NV +Q+L V PLRN+ L+ E++ + LV R L RKIW+ R FK
Sbjct: 201 MNNIKENDYLNVIVQALSHVPPLRNYLLL-EDFTKT-TELVKRCSILFRKIWNPRAFKAH 258
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGE 311
VSPHE LQ + S KRF + QS+PVEF+SW LN LH L +K +S+I FQG
Sbjct: 259 VSPHELLQEIALRSNKRFTLTTQSDPVEFLSWFLNNLHLGLGGSKSKPGSSMIQRTFQGR 318
Query: 312 LEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEK 371
L+V + I+ T++ ++ + + R FL+L LDLP PLF+D +E+
Sbjct: 319 LKVESQ----AITARADATDRLR--FEEAAQVKVDIVR--FLLLTLDLPAAPLFQDELER 370
Query: 372 NIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTR-LPKYMILHMRRFTKNNFFVEKN 430
NIIPQVPL IL K+DG++ E H R RYR+ LP Y+I H++RF++N F E+N
Sbjct: 371 NIIPQVPLTTILSKYDGKSAQE---HHAQRKRYRLLHPLPPYLIFHVKRFSQNKFVSERN 427
Query: 431 PTLVNFPVKNLELKDYIPLPTPKE---NEKLRSKYDLIANIVHDG 472
PT+V F +NL++ Y+ P P E +E + YDL+AN+VH+
Sbjct: 428 PTIVTFDARNLDVSPYVE-PNPAEWPVSEPIW--YDLVANVVHEA 469
>gi|429859841|gb|ELA34603.1| u4 tri-snrnp-associated protein 2 [Colletotrichum gloeosporioides
Nara gc5]
Length = 551
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 186/409 (45%), Positives = 244/409 (59%), Gaps = 63/409 (15%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R VLDFDFEK CSVSLSN+NVYACLVCG+YYQGRG KSHAY H+L+ HHV+IN
Sbjct: 96 YLDTIDRNVLDFDFEKLCSVSLSNINVYACLVCGRYYQGRGPKSHAYFHALDENHHVFIN 155
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------- 192
++T+KVY LP+GYE+ SL+DI+ V
Sbjct: 156 MQTQKVYVLPEGYEVKSKSLDDIKFVSDPRYTKQEVAALDRTPLRASFTLAGKEYAPGFV 215
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKG 252
G+NN+KE D++NV +Q+L V PLRNF L+ + +S L RFG L RKIW+ R FK
Sbjct: 216 GMNNLKENDYLNVIVQALSHVAPLRNFCLLED--LSSRSELAKRFGILVRKIWNPRAFKA 273
Query: 253 QVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQG 310
VSPHE LQ + S KRF + QS+PVEF+SW LN LH L TK +S++ FQG
Sbjct: 274 HVSPHELLQEISLLSSKRFTLTAQSDPVEFLSWFLNNLHLGLGGSKTKPGSSVVQRIFQG 333
Query: 311 ELEVVKEIPKNTISGNDQNTEKGSDGGD--DHDNITTETSRMPFLMLGLDLPPPPLFKDV 368
+L+V Q +D GD ++ + F+ L LDLP PLF+D
Sbjct: 334 KLKV-----------ESQAITARADAGDRLRFEDAAVSVTSTRFMFLTLDLPAAPLFQDE 382
Query: 369 MEKNIIPQVPLFNILKKFDGETVTEVVRPHVA-RMRYRVTR-LPKYMILHMRRFTKNNFF 426
+EKNIIPQVPL IL K+DG E H+A R RYR+ LP Y++ H++RF++N F
Sbjct: 383 LEKNIIPQVPLTTILSKYDGIQAQE----HLAQRKRYRLLHPLPPYLVFHVKRFSQNKFV 438
Query: 427 VEKNPTLVNFPVKNLELKDYIPLPTPKE---NEKLRSKYDLIANIVHDG 472
E+NPT+V F L++ Y+ P P E E + YDL+AN+VH+
Sbjct: 439 SERNPTIVTFDPNGLDVSPYVE-PNPGEWPPGEPI--IYDLVANVVHEA 484
>gi|302911281|ref|XP_003050458.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256731395|gb|EEU44745.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 538
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 186/405 (45%), Positives = 249/405 (61%), Gaps = 56/405 (13%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R VLDFDFEK CSVSLSN+NVYACLVCGKY+QGRG KSHAY HSL+ HHV+IN
Sbjct: 81 YLDTIDRNVLDFDFEKLCSVSLSNINVYACLVCGKYFQGRGPKSHAYFHSLDEDHHVFIN 140
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------G 193
L T++VY LP+GYE+ +L+DI++V G
Sbjct: 141 LETQRVYVLPEGYEVKSRALDDIKYVSDPRYTKKEVIEMDRAKRTSYTLDSKEYTPGFVG 200
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIKE D+ NV IQ+L V PLRN+ L+ E++ K+ LV R L RKIW+ R FK
Sbjct: 201 MNNIKENDYFNVVIQALAHVAPLRNYLLL-EDFPD-KTELVKRCSILVRKIWNPRAFKAH 258
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGE 311
VSPHE LQ + S KRF + QS+PV+F+SW LN LH L TK +S++ FQG+
Sbjct: 259 VSPHELLQEISLRSNKRFTLTAQSDPVDFLSWFLNNLHLGLGGSKTKPGSSMVQRTFQGK 318
Query: 312 LEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEK 371
++V + +D+ + +D + + R FL+L LDLP PLF+D +EK
Sbjct: 319 MKVESQAITARADASDRLRFEDAD-------VKVDVVR--FLLLTLDLPSAPLFQDELEK 369
Query: 372 NIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTR-LPKYMILHMRRFTKNNFFVEKN 430
NIIPQVPL IL K+DG+ E H R RYR+ LP Y+I H++RF++N F E+N
Sbjct: 370 NIIPQVPLTTILTKYDGQRAQE---HHAQRKRYRLMHPLPPYLIFHVKRFSQNKFVSERN 426
Query: 431 PTLVNFPVKNLELKDYIPLPTPKE---NEKLRSKYDLIANIVHDG 472
PT+V F +NL++ Y+ P P+E E + YDL+AN+VH+
Sbjct: 427 PTIVTFDARNLDMSPYVE-PNPREWPPGEPIW--YDLVANVVHEA 468
>gi|193785486|dbj|BAG50852.1| unnamed protein product [Homo sapiens]
Length = 488
Score = 340 bits (873), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 190/413 (46%), Positives = 250/413 (60%), Gaps = 55/413 (13%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREVDEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV R G+ RK+W+ RNFK SPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRSGEPMRKLWNPRNFKAHASPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD 387
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+
Sbjct: 370 KEQLLHN---DEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFN 423
Query: 388 GETVTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPV 438
G T E + + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+
Sbjct: 424 GITEKEYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPI 475
>gi|145351909|ref|XP_001420302.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580536|gb|ABO98595.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 423
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 192/430 (44%), Positives = 246/430 (57%), Gaps = 81/430 (18%)
Query: 105 CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVY 164
CPYLDTVN LDFDFEK C+VSLS ++VYACLVCGKY+ GRG+K+HAY H+LE GHHV+
Sbjct: 1 CPYLDTVNLANLDFDFEKRCAVSLSPVHVYACLVCGKYFAGRGKKTHAYAHALECGHHVF 60
Query: 165 INLRTEKVYCLPDGYEIND--PSLEDIRHV------------------------------ 192
+ L +CLPDGYE+ D +L IR V
Sbjct: 61 MRLADGAAWCLPDGYEVVDEGTTLSRIRDVLAPTYAKKYVEEEIEGARPMWRRALDGTEF 120
Query: 193 -----GLNNI--KETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIW 245
GLN I K D V+ +QSL RV PLR L+ + + + D+T+KIW
Sbjct: 121 LVGVVGLNAIWSKRDDGVSAVLQSLNRVAPLRRALLLDDARE--REDVYRALADITKKIW 178
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQS---NPVEFMSWLLNTLHSDLRNTKKNTS 302
+ARNFKG SPHEF+QAV SK F G ++ + +F+ WLLN L D + + S
Sbjct: 179 NARNFKGHSSPHEFMQAVRNRSKDAF--GAETGNHDAAQFLRWLLNELIRDEKKRGEKRS 236
Query: 303 IIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPP 362
+I CFQGE+E++ +D + + S PFLML +DLP
Sbjct: 237 VIQSCFQGEVEII----------DDSSASRAS----------------PFLMLSMDLPNA 270
Query: 363 PLFKDVMEKNIIPQVPL-FNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFT 421
PLF+DVMEKNIIPQV L +LKKFDG T R R+++T+LP Y+I++ RFT
Sbjct: 271 PLFQDVMEKNIIPQVSLERALLKKFDGVTADPKTR-----RRFKITKLPNYLIVNYSRFT 325
Query: 422 KNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRV 481
KNNFFVEKNPT+V FP + L L D+IP+P EN + YDLIANIVHDG P+ G YR
Sbjct: 326 KNNFFVEKNPTIVTFPTRGLNLADHIPVPRGDENS---ATYDLIANIVHDGAPDDGSYRA 382
Query: 482 FVQRKSEELW 491
V ++ W
Sbjct: 383 MVYHAPDKNW 392
>gi|302416643|ref|XP_003006153.1| U4/U6.U5 tri-snRNP-associated protein [Verticillium albo-atrum
VaMs.102]
gi|261355569|gb|EEY17997.1| U4/U6.U5 tri-snRNP-associated protein [Verticillium albo-atrum
VaMs.102]
Length = 549
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 185/409 (45%), Positives = 249/409 (60%), Gaps = 63/409 (15%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R VLDFDFEK CS+SLSN+NVYACLVCG+Y+QGRG KSHAY H+L+ HHVYIN
Sbjct: 92 YLDTIDRNVLDFDFEKLCSISLSNINVYACLVCGRYFQGRGPKSHAYFHALDEDHHVYIN 151
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------G 193
++T+ VY LP+GYE+ SL+DI++V G
Sbjct: 152 MQTQNVYVLPEGYEVKSKSLDDIKYVSDPRYTKQEVMELDRRAQPAWTLAGKEYAPGFVG 211
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NN+KE D++NV +Q+L V PLRN+FL+ E++ +S L R L RKIW+ R FK
Sbjct: 212 MNNLKENDYLNVILQALSHVVPLRNYFLL-EDFS-SRSELAKRTSILVRKIWNPRAFKAH 269
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGE 311
VSPHE LQ + S KRF + QS+P+EF+SW LN LH L TK +S+I+ FQG+
Sbjct: 270 VSPHELLQQIALDSNKRFTLTNQSDPIEFLSWFLNNLHLGLGGSKTKPGSSMIHRIFQGK 329
Query: 312 LEVVKEIPKNTISGNDQNTEKGSDGGD-----DHDNITTETSRMPFLMLGLDLPPPPLFK 366
L+V Q +D GD D ++ SR FL+L LDLP PLF+
Sbjct: 330 LKV-----------ESQAITARADAGDRLRFEDAADVHVAVSR--FLLLTLDLPAAPLFQ 376
Query: 367 DVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVA-RMRYRVTR-LPKYMILHMRRFTKNN 424
D +NIIPQVPL IL K+DG E H+A R RYR+ LP Y+++H++RF++N
Sbjct: 377 DENNRNIIPQVPLTTILAKYDGRHAQE----HLAQRKRYRLLHPLPPYLVMHVKRFSQNK 432
Query: 425 FFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRS-KYDLIANIVHDG 472
F E+NPT+V F +NL++ Y+ P P E+ YDL+AN+VH+
Sbjct: 433 FVSERNPTIVTFDARNLDMAPYVE-PNPAEHPPGEPIWYDLVANVVHEA 480
>gi|167516470|ref|XP_001742576.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779200|gb|EDQ92814.1| predicted protein [Monosiga brevicollis MX1]
Length = 620
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 209/456 (45%), Positives = 277/456 (60%), Gaps = 69/456 (15%)
Query: 89 GYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQ 148
+ + +R +E R+CPYLDT++R LDFDFEK CSV+LSN NVYACLVCGKYYQGRG+
Sbjct: 152 AFRRYEREAQLERSRNCPYLDTISRARLDFDFEKLCSVNLSNQNVYACLVCGKYYQGRGK 211
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV---------------- 192
++AY HSLEA HHV++NL T + YCLPD YE+ D SL DI+ V
Sbjct: 212 GTNAYMHSLEASHHVFLNLHTLRFYCLPDNYEVIDNSLSDIQFVLKPTFSKAMMHALDHS 271
Query: 193 -----------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLV- 234
GLNNIK D+VNV +Q+L RV LRNFFL PE R PL+
Sbjct: 272 SRYSRALDGTTYLPGIVGLNNIKANDYVNVVVQTLNRVPSLRNFFLDPEATRRMTDPLIV 331
Query: 235 -HRFGDLT------RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLL 287
RF RKI + R FK VSPHEFLQAV SK++FR+ Q++PV+ +SWLL
Sbjct: 332 SSRFLLALALAKLIRKINNPRAFKSHVSPHEFLQAVNNGSKRQFRLTEQADPVDLLSWLL 391
Query: 288 NTLHSDLRNTKKNTSIIYECFQGELEVV-KEIPK----NTISG--NDQNTEKGSDGGDDH 340
NTL L +K+ ++I+ + FQG + V +++P +SG D N+E+ D
Sbjct: 392 NTLQRKL--SKRGSNIVADTFQGRMRVTSRKLPPPPDVQEVSGLRIDPNSEEYQD----- 444
Query: 341 DNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE--VVRPH 398
+ S FL LGLDLPPPPL++D +NIIPQVPLF +L KFDG T +E +
Sbjct: 445 -----KVSEQKFLFLGLDLPPPPLYQDETRQNIIPQVPLFELLSKFDGSTSSEYKTYKDT 499
Query: 399 VARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKL 458
+ + +R+ +P+Y+ILH++RFTKN FFVEKNPT+VNFPVK++ D+ L + +
Sbjct: 500 IVK-SFRLLDMPQYLILHVKRFTKNAFFVEKNPTIVNFPVKDI---DFAGLVAEEFRDSS 555
Query: 459 RS-KYDLIANIVHDGKPEG--GFYRVFVQRKSEELW 491
++ KYDL+ NIVHDG P G YR + K + W
Sbjct: 556 KTYKYDLLCNIVHDGLPGAGKGTYRAHLYHKGCKKW 591
>gi|296415598|ref|XP_002837473.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633345|emb|CAZ81664.1| unnamed protein product [Tuber melanosporum]
Length = 550
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 194/468 (41%), Positives = 264/468 (56%), Gaps = 69/468 (14%)
Query: 74 DDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNV 133
D DED D ++D G G+ YLDT+NR ++ DFEK CSVSLSN+NV
Sbjct: 63 DMDEDGDYEDDVAVGQLGVGKAQEGPSEGFSDLYLDTINRLLIKVDFEKLCSVSLSNINV 122
Query: 134 YACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV- 192
YACLVCGKY+QGRG+ SHAYTHSL+ HHV+IN+ + KVY LP+ YE+ + +LEDI++V
Sbjct: 123 YACLVCGKYFQGRGRSSHAYTHSLDQDHHVFINIASLKVYVLPESYEVQNKTLEDIKYVV 182
Query: 193 --------------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFF 220
GLNNIK+ D++NV + +L V PL+N+F
Sbjct: 183 NPTYTKVDVTKLDKEPLVRWDLGGKKYIPGFVGLNNIKQNDYMNVVVHALAHVAPLKNYF 242
Query: 221 LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPV 280
++ + + L RF L RKIW+ R FK VSPHE LQ + S KRF + +QS+PV
Sbjct: 243 MLED--LSSRPELAQRFSILVRKIWNPRAFKSHVSPHELLQEISLRSSKRFTLTIQSDPV 300
Query: 281 EFMSWLLNTLHSDL--RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGD 338
+F+SW +N LH L TK TSII + FQG L+V Q +D D
Sbjct: 301 DFLSWFINNLHLSLGGSKTKPGTSIIQKVFQGRLKV-----------ESQTITARADASD 349
Query: 339 -----DHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE 393
+ I + R F+ML LDLPP P+FKD +KNIIPQVPL IL K+DG E
Sbjct: 350 RLRFEEAAEIKMDIVR--FMMLTLDLPPKPIFKDEQDKNIIPQVPLTTILSKYDGLHSQE 407
Query: 394 VVRPHVARMRYR-VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTP 452
++ R RYR ++ LP ++I H++RF+KN F E+NPT+V FP ++L++ Y+ P+
Sbjct: 408 LLG---QRKRYRLLSPLPPFLIFHIKRFSKNKFVEERNPTIVTFPTRSLDMSPYVE-PSE 463
Query: 453 KENEKLRSKYDLIANIVHD------GKPEG---GFYRVFVQRKSEELW 491
+ YDL+ANI H+ GK EG Y+V + K+ W
Sbjct: 464 GGSSTEPIWYDLVANITHESVTTTSGKKEGDIRSVYKVQLVNKASGEW 511
>gi|345567454|gb|EGX50386.1| hypothetical protein AOL_s00076g150 [Arthrobotrys oligospora ATCC
24927]
Length = 571
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 187/435 (42%), Positives = 257/435 (59%), Gaps = 69/435 (15%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDTVNR +LDFDFEK CS+SLSN+NVYACLVCGKY+QGRGQ SHAY H+L+ HHV+IN
Sbjct: 118 YLDTVNRNLLDFDFEKLCSISLSNINVYACLVCGKYFQGRGQNSHAYFHALDESHHVFIN 177
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------G 193
+ T ++Y LP+ YE+ SL+DI++V G
Sbjct: 178 IATLRIYVLPESYEVKQKSLDDIKYVANPTYTREDVAKLDKEETKKWDLTGKRYTPGFVG 237
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
LNNIKE D++NV + +L VTPLRN+ ++ EN + L RF L RKIW++R F+G
Sbjct: 238 LNNIKENDYLNVVVHALAHVTPLRNYMML-ENM-SSRPELAQRFSILVRKIWNSRAFRGH 295
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK--NTSIIYECFQGE 311
VSPHE LQ + S K+F + QS+PVEF+SW +N LH L +K +SI+ + FQG
Sbjct: 296 VSPHELLQEISLRSSKKFTLTTQSDPVEFLSWFVNNLHLSLGGSKTAPGSSIVQKVFQGR 355
Query: 312 LEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEK 371
L V E T + + + + G+ + T+ R ++ML L+LPP PLF+D ++K
Sbjct: 356 LRV--ESQAITAKADASDRLRFEEAGE----VKTDMHR--YMMLTLELPPAPLFQDELDK 407
Query: 372 NIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTR-LPKYMILHMRRFTKNNFFVEKN 430
NIIPQVPL IL K+DG E++ R RY++ + LP Y++ H++RF+KN F EKN
Sbjct: 408 NIIPQVPLTAILSKYDGTRAQELLG---QRKRYKLLQPLPPYLVFHIKRFSKNKFVFEKN 464
Query: 431 PTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHD-----GKP---------EG 476
PT+V FP +L++ Y E YDL ANIVH+ G P EG
Sbjct: 465 PTIVTFPSTSLDMSPY------AEGATGPIWYDLTANIVHESVARKGGPSGVKSEAGEEG 518
Query: 477 GFYRVFVQRKSEELW 491
Y+V ++ K+ + W
Sbjct: 519 HAYKVQLKDKARDEW 533
>gi|407921556|gb|EKG14698.1| Peptidase C19 ubiquitin carboxyl-terminal hydrolase 2 [Macrophomina
phaseolina MS6]
Length = 558
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 207/501 (41%), Positives = 280/501 (55%), Gaps = 95/501 (18%)
Query: 51 EEEEYGGRGDSGAKV-GQNGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEV--RRDCP- 106
E+E+ G D+ +V G+ G DDED+ +V V R++ P
Sbjct: 54 EDEQNPGIEDAAEEVHGELDEAGAIDDEDEP-----------------MVSVPKRQEAPT 96
Query: 107 ------YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAG 160
YLDT++R+VLDFDFEK CSV+LSN+NVYACLVCGKYYQGRG KS AY H+L+ G
Sbjct: 97 EGYNDLYLDTIDRKVLDFDFEKLCSVTLSNINVYACLVCGKYYQGRGPKSQAYFHALDEG 156
Query: 161 HHVYINLRTEKVYCLPDGYEINDPSLEDIRHV---------------------------- 192
HHVYINL T+KVY LP+GYE+ SLEDI+ V
Sbjct: 157 HHVYINLETKKVYVLPEGYEVKSKSLEDIKFVADPKYSKEEVMKLDKEQKTAWDLVGRKY 216
Query: 193 -----GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA 247
G+NNIK D+ NV I +L VTPLRNFF++ + + L RF L RKIW+
Sbjct: 217 IPGFVGMNNIKANDYFNVAIHALAHVTPLRNFFMLED--LSSRPQLAQRFSTLVRKIWNP 274
Query: 248 RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIY 305
R FK VSPHE LQ + S KRF + QS+PV+F+ W LN LH L +K +SI+
Sbjct: 275 RAFKSHVSPHELLQEIALRSSKRFTLTEQSDPVDFLQWFLNNLHLSLGGSKSKPGSSIVQ 334
Query: 306 ECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLF 365
FQG L++ ++ D+ + SD ++ + F++L LDLPP P+F
Sbjct: 335 RVFQGSLKIESQLITARADAADRLRFEDSD---------VQSEKTHFMILTLDLPPRPVF 385
Query: 366 KDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYR-VTRLPKYMILHMRRFTKNN 424
+D +EKNIIPQVPL IL K+DG + E + R RYR + LP Y++ H++RF+KN
Sbjct: 386 QDELEKNIIPQVPLTRILTKYDGVSAQEHLN---YRKRYRLLHPLPPYLLFHIKRFSKNK 442
Query: 425 FFVEKNPTLVNFPVKNLELKDYI-PLPT---PKENEKLRSKYDLIANIVH---------- 470
F E+NPT+V FP ++L++ Y+ P PT P E YDL+ANI H
Sbjct: 443 FVSERNPTIVTFPTRSLDMSPYVEPNPTIHSPGEP----IWYDLVANITHEAVRIRDDSV 498
Query: 471 DGKPEGGFYRVFVQRKSEELW 491
+G+ E +RV ++ KS + W
Sbjct: 499 EGESEKKVWRVHLRDKSRDEW 519
>gi|367024425|ref|XP_003661497.1| hypothetical protein MYCTH_2300970 [Myceliophthora thermophila ATCC
42464]
gi|347008765|gb|AEO56252.1| hypothetical protein MYCTH_2300970 [Myceliophthora thermophila ATCC
42464]
Length = 557
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 207/498 (41%), Positives = 285/498 (57%), Gaps = 76/498 (15%)
Query: 23 VEQSSPSPPRLGFENPLLPL--ANTYDDDDEEEEYGGRGDSGAKVGQNGRTGEDDDEDKD 80
V SP+ + F++ + + A+ D DDE+ +NG +D + D D
Sbjct: 13 VSADSPASKKSRFDDYTMDVIPASAEDGDDEQTR---------PAHENGVVKQDGNGDAD 63
Query: 81 EDEDDLANGYGQGQRSRLVEVRRDCP-------YLDTVNRQVLDFDFEKFCSVSLSNLNV 133
E + + + +R+ P YLDT++R VLDFDFEK CSV+LSN+NV
Sbjct: 64 E----FSEEEEEEEVEEKAPIRQSAPTAGYDDLYLDTIDRNVLDFDFEKLCSVTLSNINV 119
Query: 134 YACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV- 192
YACLVCGKYYQGRG KSHAY H+L+ HHV+IN+ T+KVY LP+GYE+ SL+DI++V
Sbjct: 120 YACLVCGKYYQGRGPKSHAYFHALDEDHHVFINMSTQKVYVLPEGYEVKSKSLDDIKYVS 179
Query: 193 --------------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFF 220
G+NNIKE D++NV +Q+L V PLRNFF
Sbjct: 180 DPRYTRQEVAEFDRKPRTSLTLAGKEYTPGFVGMNNIKENDYLNVVVQALSHVAPLRNFF 239
Query: 221 LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPV 280
L+ E++ LV R L RKIW+ R FK VSPHE LQ V S KRF + QS+PV
Sbjct: 240 LL-EDFSSAPE-LVKRTSILFRKIWNPRAFKAHVSPHELLQEVSLRSNKRFTLTAQSDPV 297
Query: 281 EFMSWLLNTLHSDL--RNTKKNTSIIYECFQGELEV-VKEIPKNTISGNDQ-NTEKGSDG 336
+F+SW LN LH L TK +S I FQG+L+V + I T + +D+ E+ S+
Sbjct: 298 DFLSWFLNNLHLGLGGSKTKPGSSPIQRIFQGKLKVESQAITARTDTHDDRLRFEEASE- 356
Query: 337 GDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVR 396
I T+ +R FL+L LDLPP PLF+D ++NIIPQVPL IL K++G T E+
Sbjct: 357 ------IKTDIAR--FLLLTLDLPPAPLFQDEEQRNIIPQVPLTTILAKYNGVTSQEL-- 406
Query: 397 PHVARMRYRVTR-LPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKEN 455
+ R RYR+ LP ++ILH++RF++N F E+NPT+V F NL++ Y+ P P +
Sbjct: 407 -NAQRKRYRLVHPLPPFLILHVKRFSRNRFVSERNPTIVTFDPHNLDVSPYVE-PDPAYH 464
Query: 456 EKLRS-KYDLIANIVHDG 472
YDL+AN+VH+
Sbjct: 465 PPGEPIWYDLVANVVHEA 482
>gi|342878492|gb|EGU79829.1| hypothetical protein FOXB_09688 [Fusarium oxysporum Fo5176]
Length = 538
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 184/405 (45%), Positives = 249/405 (61%), Gaps = 56/405 (13%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R VLDFDFEK CSVSLSN+NVYACLVCGKY+QGRG KSHAY HSL+ HHVYIN
Sbjct: 83 YLDTIDRNVLDFDFEKLCSVSLSNINVYACLVCGKYFQGRGPKSHAYFHSLDEDHHVYIN 142
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------G 193
L T++VY LP+GYE+ +L+DI++V G
Sbjct: 143 LETQRVYVLPEGYEVKSRALDDIKYVSDPRYSKKEVIEMDRTPHTSYTLDRKEYIPGFVG 202
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIK+ D++NV +Q+L V PLRN+ L+ E++ + K+ LV R L RKIW+ R FK
Sbjct: 203 MNNIKDNDYLNVIVQALAHVAPLRNYLLL-EDFSN-KTELVKRCSILVRKIWNPRAFKAH 260
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGE 311
VSPHE LQ + S KRF + QS+PV+F+SW LN LH L TK +S+I FQG+
Sbjct: 261 VSPHELLQEISLRSNKRFTLTTQSDPVDFLSWFLNNLHLGLGGSKTKPGSSMIQRTFQGK 320
Query: 312 LEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEK 371
++V + D+ + +D + + R FL+L LDLP PLF+D +EK
Sbjct: 321 MKVESQAITARADATDRLRFEDAD-------VKVDIVR--FLLLTLDLPSAPLFQDELEK 371
Query: 372 NIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTR-LPKYMILHMRRFTKNNFFVEKN 430
NIIPQVPL IL K+DG+ E H R RYR+ LP ++ H++RF++N F E+N
Sbjct: 372 NIIPQVPLTTILTKYDGQRAQE---HHAQRKRYRLMHPLPPFLAFHVKRFSQNKFVSERN 428
Query: 431 PTLVNFPVKNLELKDYIPLPTPKE---NEKLRSKYDLIANIVHDG 472
PT+V F +NL++ Y+ P PKE E + YDL+AN++H+
Sbjct: 429 PTIVTFDARNLDMSPYVE-PNPKEWPPGEPIW--YDLVANVIHEA 470
>gi|347841544|emb|CCD56116.1| similar to U4/U6.U5 tri-snRNP-associated protein [Botryotinia
fuckeliana]
Length = 553
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 198/443 (44%), Positives = 263/443 (59%), Gaps = 69/443 (15%)
Query: 81 EDEDDLANGYG----QGQRSRLVEVRRDCP-------YLDTVNRQVLDFDFEKFCSVSLS 129
EDE+DL NG + + + V R P YLDT+NR VLDFDFEK CS+SLS
Sbjct: 59 EDEEDLKNGMEDLEVEDEDLQFVVPREKAPMEGYDDLYLDTINRNVLDFDFEKLCSISLS 118
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
N+NVYACLVCGKYYQGRG KSHAY H+LE GHHV+IN++T+KVY LP+GYE+ + SL+DI
Sbjct: 119 NINVYACLVCGKYYQGRGTKSHAYFHALEVGHHVFINMQTQKVYVLPEGYEVKNKSLDDI 178
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+ V G+NNIK+ D+ NV IQ+L V PL
Sbjct: 179 KFVSDPTYTKEQVMAMDREAKTSWTLSGKEYIPGFVGMNNIKDNDYFNVVIQALSHVPPL 238
Query: 217 RNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQ 276
RNFFL+ E++ H + L+ R L RKIW+ R FK VSPHE LQ + S K+F + Q
Sbjct: 239 RNFFLL-EDF-HNRPELIKRVSILFRKIWNPRAFKSHVSPHELLQEISLKSNKKFNLTTQ 296
Query: 277 SNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGS 334
S+PV+F+SW LN LH L TK +SII + FQG+L+V Q +
Sbjct: 297 SDPVDFLSWFLNNLHLALGGSKTKPGSSIIQKIFQGKLKV-----------ESQAITAKA 345
Query: 335 DGGD----DHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGET 390
D GD + ++ T+ SR F++L LDLPP PLF+D +E+NIIPQ+PL +IL K+DG
Sbjct: 346 DAGDRLRFEDADVKTDVSR--FMLLTLDLPPAPLFQDELERNIIPQIPLTSILAKYDGLK 403
Query: 391 VTEVVRPHVARMRYR-VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPL 449
E + R RYR + LP +++ H++RF+ N F E+NPT+V F +NL++ YI
Sbjct: 404 AQEHLN---MRKRYRLLHPLPPFLLFHIKRFSHNKFVDERNPTIVTFDARNLDMSPYIEP 460
Query: 450 PTPKENEKLRSKYDLIANIVHDG 472
YDL+ANIVH+
Sbjct: 461 DMKHARPGEPIWYDLVANIVHEA 483
>gi|400600854|gb|EJP68522.1| U4/U6.U5 tri-snRNP-associated protein [Beauveria bassiana ARSEF
2860]
Length = 557
Score = 337 bits (865), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 186/416 (44%), Positives = 245/416 (58%), Gaps = 71/416 (17%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R VLDFDFEK CS+SLSN+NVYACLVCG+Y+QGRG KSHAY HSL+ HHVYIN
Sbjct: 91 YLDTIDRNVLDFDFEKLCSISLSNINVYACLVCGRYFQGRGPKSHAYFHSLDEDHHVYIN 150
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------- 192
L T+KVY LP+GYE+ +L+DI++V
Sbjct: 151 LETQKVYVLPEGYEVRSKALDDIKYVSDPRYTKKEVMELDRPAGGGGGRKKSWTLGGKEY 210
Query: 193 -----GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA 247
G+NNIKE D++NV +Q+L V PLRN+ L+ E++ KS LV R L RKIW+
Sbjct: 211 VPGFVGMNNIKENDYINVIVQALSHVAPLRNYLLL-EDF-SGKSELVKRCSILFRKIWNP 268
Query: 248 RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIY 305
R FK VSPHE LQ + S KRF + QS+PV+F+SW LN LH L T+ +S++
Sbjct: 269 RAFKSHVSPHELLQEIALRSNKRFTLTSQSDPVDFLSWFLNNLHIGLGGSKTRPGSSMVQ 328
Query: 306 ECFQGELEVVKEIPKNTISGNDQNTEKGSDGGD-----DHDNITTETSRMPFLMLGLDLP 360
FQG L+V Q +D GD D ++ + R FL+L LDLP
Sbjct: 329 RAFQGRLKV-----------ESQAITARADVGDRLRFEDAGEVSVDVVR--FLLLTLDLP 375
Query: 361 PPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTR-LPKYMILHMRR 419
PLF+D +E+NIIPQVPL +IL K+DG + E H R RYR+ LP Y+ LH++R
Sbjct: 376 SAPLFQDELERNIIPQVPLTSILAKYDGRSAQE---HHAQRKRYRLLHPLPPYLALHVKR 432
Query: 420 FTKNNFFVEKNPTLVNFPVKNLELKDYI---PLPTPKENEKLRSKYDLIANIVHDG 472
F+ N F E+NPT+V F +NL++ Y+ P P YDL+AN+VH+
Sbjct: 433 FSHNKFVAERNPTIVTFDARNLDVAPYVEPDPAAWPPGEPIW---YDLVANVVHEA 485
>gi|392870120|gb|EAS27281.2| snRNP assembly factor [Coccidioides immitis RS]
Length = 606
Score = 337 bits (864), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 184/412 (44%), Positives = 247/412 (59%), Gaps = 63/412 (15%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R LDFDFEK CSVSLSN+NVYACLVCGKY+QGRG KSHAY HSLE GHHV++N
Sbjct: 99 YLDTIHRSNLDFDFEKLCSVSLSNINVYACLVCGKYFQGRGPKSHAYFHSLEVGHHVFVN 158
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------G 193
+ T+KVY LP+GYE+ + SL+DI++V G
Sbjct: 159 METKKVYVLPEGYEVKNKSLDDIKYVIDPSYVKEEVARLDTVVTEAWDLAGKKYRPGYVG 218
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIK D++NV +Q L V P+RNFFL+ L RFG L RK+W+ + FK
Sbjct: 219 MNNIKSNDYLNVIVQLLAHVRPIRNFFLLHRFPVPGTPQLPLRFGMLVRKLWNPKAFKCH 278
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK----NTSIIYECFQ 309
VSPHE LQ + S KRF + QS+PVEF+SW LN LH L +KK TS+++ FQ
Sbjct: 279 VSPHELLQEIALRSSKRFTLTHQSDPVEFLSWFLNNLHLSLGGSKKPSRTPTSVVHSAFQ 338
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDH----DNITTETSRMPFLMLGLDLPPPPLF 365
G L + Q SD + ++ TT + R PFL+L LDLPP PLF
Sbjct: 339 GHLRI-----------ESQAITARSDAANARLVFSESSTTTSQRTPFLILTLDLPPTPLF 387
Query: 366 KDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTR-LPKYMILHMRRFTKNN 424
+ E++IIPQVPL N+L K++G T E + R+R+R+ LP+Y++ H++RF+KN
Sbjct: 388 QAADEESIIPQVPLVNLLNKYNGVTAIEKL---AHRVRHRLLHPLPQYLLFHIKRFSKNK 444
Query: 425 FFVEKNPTLVNFPV-KNLELKDYI-PLPT--PKENEKLRSKYDLIANIVHDG 472
F E+NPT+V FP + L++ Y+ P P+ P L YDL+AN++ D
Sbjct: 445 FVAERNPTIVTFPSPRGLDMSPYVEPNPSVWPPGEPIL---YDLVANVILDA 493
>gi|156085110|ref|XP_001610038.1| u4/u6.u5 tri-snRNP-associated 65 kDa protein [Babesia bovis T2Bo]
gi|154797290|gb|EDO06470.1| u4/u6.u5 tri-snRNP-associated 65 kDa protein, putative [Babesia
bovis]
Length = 470
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 179/422 (42%), Positives = 256/422 (60%), Gaps = 62/422 (14%)
Query: 105 CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVY 164
CPYL T+NR +LDFDFEK CS++LSN +VYACLVCG+Y++GRG+ ++AYTH+LE H+V+
Sbjct: 40 CPYLGTINRHLLDFDFEKVCSITLSNKHVYACLVCGRYFEGRGKNTYAYTHALEERHYVF 99
Query: 165 INLRTEKVYCLPDGYEINDPSLEDIR---------------------------------H 191
INL KVY LPD Y + D SL DI
Sbjct: 100 INLHDCKVYSLPDNYHVEDASLNDIALFLKPKYTKEYVENIDTKIVYGKGLDGTDFIPGC 159
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP--LVHRFGDLTRKIWHARN 249
+GLNN+K+TD+ NV IQ L V +RN+ L+ + R + P ++ +L RKI++ +N
Sbjct: 160 IGLNNLKQTDYFNVIIQVLCTVATVRNYLLLLDIDR-IQPPDNVISTLVELIRKIYNTKN 218
Query: 250 FKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQ 309
FKG VSPHEFLQAV ASK ++IGV ++PV ++WLLN L + LRN K SI+ + F
Sbjct: 219 FKGIVSPHEFLQAVGVASKGLYKIGVHNDPVALLTWLLNRLDTKLRNKKTKESIVAKAFG 278
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVM 369
G+L V + D DN T + + PF M+ LD+P P+FKD
Sbjct: 279 GQLNVYTQ---------------------DGDNWTQKIT--PFKMITLDVPNAPIFKDDK 315
Query: 370 EKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEK 429
EKNIIPQV +F +L+KF GE+ P+ +Y++ +LP Y++++++RFTKNNFF+EK
Sbjct: 316 EKNIIPQVSIFQLLQKFQGESAH--TSPNGELCKYKIWKLPDYLVINIKRFTKNNFFIEK 373
Query: 430 NPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEE 489
NPT+V+FP+KNL++ YI +P + + + ++YDL ++ H G PE G Y++ V
Sbjct: 374 NPTIVSFPMKNLDMGIYIDDKSPFKGD-INARYDLACSVCHQGNPESGRYKIHVLHPPTG 432
Query: 490 LW 491
W
Sbjct: 433 DW 434
>gi|303314851|ref|XP_003067434.1| ubiquitin carboxyl-terminal hydrolase domain containing protein
[Coccidioides posadasii C735 delta SOWgp]
gi|240107102|gb|EER25289.1| ubiquitin carboxyl-terminal hydrolase domain containing protein
[Coccidioides posadasii C735 delta SOWgp]
gi|320037789|gb|EFW19726.1| snRNP assembly factor [Coccidioides posadasii str. Silveira]
Length = 606
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 196/484 (40%), Positives = 269/484 (55%), Gaps = 76/484 (15%)
Query: 48 DDDEEEEYGGRGDSGAKVGQNGRTGEDDDEDKDEDEDDLANGYGQG------QRSRLVEV 101
+D E E G + + R G D D++ +++ G + V
Sbjct: 27 EDTEPEREGTTPLRERRWEDDERNGADILAAADQEAEEIEEAVGHTSDWDDEEPVSQASV 86
Query: 102 RRDCP-------YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYT 154
R+ P YLDT++R LDFDFEK CSVSLSN+NVYACLVCGKY+QGRG KSHAY
Sbjct: 87 RQTEPLQGYSDLYLDTIHRSNLDFDFEKLCSVSLSNINVYACLVCGKYFQGRGPKSHAYF 146
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV---------------------- 192
HSLE GHHV++N+ T+KVY LP+GYE+ + SL+DI++V
Sbjct: 147 HSLEIGHHVFVNMETKKVYVLPEGYEVKNKSLDDIKYVIDPSYVKEEVARLDTVVTEAWD 206
Query: 193 -----------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLT 241
G+NNIK D++NV +Q L V P+RNFFL+ L RFG L
Sbjct: 207 LAGKKYRPGYVGMNNIKSNDYLNVIVQLLAHVRPIRNFFLLHRFPVPGTPQLPLRFGMLV 266
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-- 299
RK+W+ + FK VSPHE LQ + S KRF + QS+PVEF+SW LN LH L +KK
Sbjct: 267 RKLWNPKAFKCHVSPHELLQEIALRSSKRFTLTHQSDPVEFLSWFLNNLHLSLGGSKKPS 326
Query: 300 --NTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDH----DNITTETSRMPFL 353
TS+++ FQG L + Q SD + ++ TT + R PFL
Sbjct: 327 PTPTSVVHSAFQGHLRI-----------ESQAITARSDAANARLVFSESSTTTSQRTPFL 375
Query: 354 MLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTR-LPKY 412
+L LDLPP PLF+ E++IIPQVPL N+L K++G T E + R+R+R+ LP+Y
Sbjct: 376 ILTLDLPPTPLFQAADEESIIPQVPLVNLLNKYNGVTAIEKL---AHRVRHRLLHPLPQY 432
Query: 413 MILHMRRFTKNNFFVEKNPTLVNFPV-KNLELKDYI-PLPT--PKENEKLRSKYDLIANI 468
++ H++RF+KN F E+NPT+V FP + L++ Y+ P P+ P L YDL+AN+
Sbjct: 433 LLFHIKRFSKNKFVAERNPTIVTFPSPRGLDMSPYVEPNPSVWPPGEPIL---YDLVANV 489
Query: 469 VHDG 472
+ D
Sbjct: 490 ILDA 493
>gi|395334732|gb|EJF67108.1| spindle pole body protein [Dichomitus squalens LYAD-421 SS1]
Length = 530
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 183/423 (43%), Positives = 247/423 (58%), Gaps = 73/423 (17%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+NR VLDFDFEK CSVS SN+N+Y CLVCGKY+QGRG+ S+A+ H++ HHV+IN
Sbjct: 53 YLDTINRAVLDFDFEKVCSVSSSNINIYGCLVCGKYFQGRGRNSYAFAHAIHDDHHVFIN 112
Query: 167 LRTEKVYCLPDGYEINDPSLEDIR------------------------------------ 190
L T KVY LPDGY ++DPSL+DI
Sbjct: 113 LETTKVYVLPDGYLVSDPSLDDISFVLAPKFTLASVSTLSTPEHLRKPSYDLSNKPYIPG 172
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNF 250
++GLNNIK D++NV I SL+ VT LR+ L+ N+R + L+ RF L +K+W+ R F
Sbjct: 173 YIGLNNIKRNDYMNVVIHSLLHVTTLRDHLLL-SNFRGKEPELLKRFAGLAKKMWNPRLF 231
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTS-------- 302
K QVSPHEFLQ V +AS +F + Q +P++F+ WLLN LH D+ TKK S
Sbjct: 232 KSQVSPHEFLQEVNRASAGKFSLEKQGDPIDFLGWLLNHLHKDMGGTKKKNSSWSSGRRY 291
Query: 303 -----------IIYECFQGE--LEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSR 349
+I+ FQGE +E + + + GN++ D I + S
Sbjct: 292 CGPPNDLLLIGVIFSTFQGEVRMETQQVLVRPDTGGNEKPR------FDIDREIKSNVS- 344
Query: 350 MPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRL 409
PFL L +DLPPPPLF+D +EKNIIPQV + ++L K+DG+ E R++ RL
Sbjct: 345 -PFLFLAVDLPPPPLFQDAVEKNIIPQVSIQSVLDKYDGQKTQE---SSGQLRRFKCQRL 400
Query: 410 PKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIV 469
P Y+ILH +RFTKN F EKNPT+VNFP++ L+ KDY+ + + YDLIAN+
Sbjct: 401 PPYIILHFKRFTKNMFVEEKNPTIVNFPLRGLDFKDYLDASAVHPS----TVYDLIANVT 456
Query: 470 HDG 472
H+
Sbjct: 457 HES 459
>gi|348688293|gb|EGZ28107.1| hypothetical protein PHYSODRAFT_309027 [Phytophthora sojae]
Length = 489
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 188/474 (39%), Positives = 258/474 (54%), Gaps = 125/474 (26%)
Query: 105 CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVY 164
CPYLDT+N Q+LDFDFEK CS+SLS+ NVYACLVCGKY++GRG+ +HA+THS+++ HHV+
Sbjct: 24 CPYLDTINHQLLDFDFEKVCSISLSDQNVYACLVCGKYFKGRGRNTHAFTHSVQSSHHVF 83
Query: 165 INLRTEKVYCLPDGYEINDPSLEDIR---------------------------------H 191
INL+T+++YCLPD YE+ D +L+ ++
Sbjct: 84 INLQTDRIYCLPDNYEVVDNTLKPVQDALRPAFEPEQIARLDQNRILAQDAFGVSYLPGF 143
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI-PENYRHCKSPLVHRFGDLTRKIWHARNF 250
+GLNN+K TD++NV +Q+L V PLR+FFL + KS LV RFG+L RK+W NF
Sbjct: 144 IGLNNLKHTDYINVVVQALAHVPPLRDFFLANAATTKKIKSKLVLRFGELLRKMWSPHNF 203
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQG 310
K +SPHE +Q + K +SII++CFQG
Sbjct: 204 KNTISPHELVQEISGLGGSH---------------------------KPGSSIIHKCFQG 236
Query: 311 ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVME 370
+EV + +D+ +D + ++T S PFLM+ LDLP PLFKD
Sbjct: 237 FVEV---------TTDDETKAASADPAERESAVSTTVS--PFLMMALDLPSTPLFKDSQG 285
Query: 371 KNIIPQVPLFNILKKFDGETVTEVVR-PHVARMRYRVTRLPKYMILHMRRFTKNNFFVEK 429
NIIPQ+PLF +L+K++G VT V++ H + YR+ LP Y+I H++RFT+NNFF+EK
Sbjct: 286 GNIIPQIPLFTVLEKYNGSHVTHVLQGSHRLKKTYRIDSLPAYLIFHVKRFTRNNFFIEK 345
Query: 430 NPTLVNFPVKNLELKDYIPL--PTPKENE-------KLR--------------------- 459
NPT+V FPVKNLEL+DY+ L P E E +LR
Sbjct: 346 NPTIVTFPVKNLELRDYLKLDQSLPSEEELRNKSISELRDILRNHKQSTEDCVEKADLVE 405
Query: 460 ---------SKYDLIANIVHD-----GKPEG--------GFYRVFVQRKSEELW 491
+KY+LIANI HD G+ G YRV VQ ++ E W
Sbjct: 406 KILRVTLPSTKYNLIANICHDSPVTTGQEAALQTNPLTEGSYRVHVQNRATEQW 459
>gi|119175368|ref|XP_001239925.1| conserved hypothetical protein [Coccidioides immitis RS]
Length = 787
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 184/412 (44%), Positives = 247/412 (59%), Gaps = 63/412 (15%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R LDFDFEK CSVSLSN+NVYACLVCGKY+QGRG KSHAY HSLE GHHV++N
Sbjct: 280 YLDTIHRSNLDFDFEKLCSVSLSNINVYACLVCGKYFQGRGPKSHAYFHSLEVGHHVFVN 339
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------G 193
+ T+KVY LP+GYE+ + SL+DI++V G
Sbjct: 340 METKKVYVLPEGYEVKNKSLDDIKYVIDPSYVKEEVARLDTVVTEAWDLAGKKYRPGYVG 399
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIK D++NV +Q L V P+RNFFL+ L RFG L RK+W+ + FK
Sbjct: 400 MNNIKSNDYLNVIVQLLAHVRPIRNFFLLHRFPVPGTPQLPLRFGMLVRKLWNPKAFKCH 459
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK----NTSIIYECFQ 309
VSPHE LQ + S KRF + QS+PVEF+SW LN LH L +KK TS+++ FQ
Sbjct: 460 VSPHELLQEIALRSSKRFTLTHQSDPVEFLSWFLNNLHLSLGGSKKPSRTPTSVVHSAFQ 519
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDH----DNITTETSRMPFLMLGLDLPPPPLF 365
G L + Q SD + ++ TT + R PFL+L LDLPP PLF
Sbjct: 520 GHLRI-----------ESQAITARSDAANARLVFSESSTTTSQRTPFLILTLDLPPTPLF 568
Query: 366 KDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTR-LPKYMILHMRRFTKNN 424
+ E++IIPQVPL N+L K++G T E + R+R+R+ LP+Y++ H++RF+KN
Sbjct: 569 QAADEESIIPQVPLVNLLNKYNGVTAIEKL---AHRVRHRLLHPLPQYLLFHIKRFSKNK 625
Query: 425 FFVEKNPTLVNFPV-KNLELKDYI-PLPT--PKENEKLRSKYDLIANIVHDG 472
F E+NPT+V FP + L++ Y+ P P+ P L YDL+AN++ D
Sbjct: 626 FVAERNPTIVTFPSPRGLDMSPYVEPNPSVWPPGEPIL---YDLVANVILDA 674
>gi|340904868|gb|EGS17236.1| ubiquitin thiolesterase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 557
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 185/406 (45%), Positives = 253/406 (62%), Gaps = 56/406 (13%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R VLDFDFEK CSV+LSN+NVYACLVCGKYYQGRG +HAY H+L+ HHV+IN
Sbjct: 94 YLDTIDRNVLDFDFEKLCSVTLSNINVYACLVCGKYYQGRGPNTHAYFHALDEDHHVFIN 153
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------G 193
L T+KVY LP+GYE+ SL+DI++V G
Sbjct: 154 LSTQKVYVLPEGYEVKSKSLDDIKYVSDPRYTRQEVAEFDRKPRTSYTLQGKEYTPGFVG 213
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIKE D++NV +Q+L V+PLRNFFL+ E++ + LV R L RKIW+ R FK
Sbjct: 214 MNNIKENDYLNVIVQALSHVSPLRNFFLL-EDFSNAPE-LVKRTSILFRKIWNPRAFKAH 271
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGE 311
VSPHE LQ V S KRF + QS+PV+F+SW LN LH L TK +S++ FQG+
Sbjct: 272 VSPHELLQEVSLCSNKRFTLTAQSDPVDFLSWYLNNLHLGLGGSKTKPQSSVVQRIFQGK 331
Query: 312 LEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEK 371
L+V + I+ + ++ ++ I + +R FL+L LDLPP PLF+D E+
Sbjct: 332 LKVESQ----AITARADHLDRLR--FEEATEIKVDIAR--FLLLTLDLPPAPLFQDEQER 383
Query: 372 NIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTR-LPKYMILHMRRFTKNNFFVEKN 430
NIIPQVPL +L K++G T E+ + R RYR+ LP +++LH++RFTKN F E+N
Sbjct: 384 NIIPQVPLTTLLAKYNGVTAQEL---NAQRKRYRLMHPLPPFLLLHIKRFTKNRFIAERN 440
Query: 431 PTLVNF-PVKNLELKDYIPLPTPKE---NEKLRSKYDLIANIVHDG 472
PT+V F P L++ Y+ P P + +E + YDL+AN+VH+
Sbjct: 441 PTIVVFDPRSGLDISPYVE-PDPSQHPPDEPI--IYDLVANVVHEA 483
>gi|169601432|ref|XP_001794138.1| hypothetical protein SNOG_03581 [Phaeosphaeria nodorum SN15]
gi|111067666|gb|EAT88786.1| hypothetical protein SNOG_03581 [Phaeosphaeria nodorum SN15]
Length = 560
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 196/464 (42%), Positives = 267/464 (57%), Gaps = 74/464 (15%)
Query: 81 EDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCG 140
+DEDD +R E YLDT+NR+VLDFDFEK CSV+LSN+NVYACLVCG
Sbjct: 76 DDEDDNEPAIAAPKRQTAPEAGYTDLYLDTINRKVLDFDFEKLCSVTLSNINVYACLVCG 135
Query: 141 KYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV-------- 192
KYYQGRG KS AY H+LE GHHVY+N+ T+KV+ LP+GYE+ SL+D++ V
Sbjct: 136 KYYQGRGPKSQAYFHALEEGHHVYVNMETKKVFVLPEGYEVQSKSLDDLKFVVDPRMSKA 195
Query: 193 -------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR 227
G+NNIK D+ NV IQ+L V PLRN+F++ +
Sbjct: 196 EVARLDKEPKVSWDLSNREYIPGFVGMNNIKANDYFNVVIQALSHVVPLRNYFMLED--L 253
Query: 228 HCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLL 287
+ + RF L RKIW+ R FK VSPHE LQ V S KRF + Q++PV+F+SW L
Sbjct: 254 SSRPQIAQRFSTLVRKIWNPRAFKTHVSPHELLQEVALRSSKRFNLTDQADPVDFISWFL 313
Query: 288 NTLHSDL--RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGD----DHD 341
N LH + TK +SI+ + FQG L++ Q +D GD +
Sbjct: 314 NHLHLAVGGSKTKPGSSIVQKVFQGSLKI-----------ESQEITARADAGDRLRFEDA 362
Query: 342 NITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVAR 401
+ TE S+ FL+L LDLP PLF+D +EKNIIPQVPL IL K+DG E ++ R
Sbjct: 363 AVKTEISK--FLVLTLDLPAAPLFQDALEKNIIPQVPLTTILGKYDGMRPQEKMK---NR 417
Query: 402 MRYR-VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKE---NEK 457
+RYR + LP Y++ +++RF+KN F E+NPT+V FP +L++ Y+ P PKE E
Sbjct: 418 VRYRLLHPLPPYLLFNIKRFSKNKFVSERNPTIVTFPTVSLDMSPYVE-PNPKEYPPGEP 476
Query: 458 LRSKYDLIANIVH----------DGKPEGGFYRVFVQRKSEELW 491
+ YDL+ANI H +G+ E +RV ++ ++ + W
Sbjct: 477 IW--YDLVANITHEAVKKKDDSVEGEQESKVWRVQLKDRARDEW 518
>gi|346325327|gb|EGX94924.1| U4/U6.U5 tri-snRNP-associated protein 2 [Cordyceps militaris CM01]
Length = 554
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 186/415 (44%), Positives = 243/415 (58%), Gaps = 71/415 (17%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+NR VLDFDFEK CS+SLSN+NVYACLVCG+Y+QGRG KSHAY HSL+ HHVYIN
Sbjct: 92 YLDTINRNVLDFDFEKLCSISLSNINVYACLVCGRYFQGRGPKSHAYFHSLDEDHHVYIN 151
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------- 192
L T++VY LP+GYE+ +L+DI++V
Sbjct: 152 LETQRVYVLPEGYEVKSKALDDIKYVSDPRYTKKEVMQLDRAAGARKKSWTLGGKEYVPG 211
Query: 193 --GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNF 250
G+NNIKE D++NV +Q+L V PLRN+ L+ + KS LV R L RKIW+ R F
Sbjct: 212 FVGMNNIKENDYLNVIVQALSHVAPLRNYLLLDDF--SGKSELVKRCSILFRKIWNPRAF 269
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECF 308
K VSPHE LQ + S KRF + QS+PV+F+SW LN LH L T+ +S++
Sbjct: 270 KSHVSPHELLQEIALRSNKRFTLTAQSDPVDFLSWFLNYLHLGLGGSKTRPGSSMVQRAL 329
Query: 309 QGELEVVKEIPKNTISGNDQNTEKGSDGGD-----DHDNITTETSRMPFLMLGLDLPPPP 363
QG L+V Q +D GD D + + R FL+L LDLPP P
Sbjct: 330 QGRLKV-----------ESQAITARADAGDRLRFEDAGEVKVDIVR--FLLLTLDLPPAP 376
Query: 364 LFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTR-LPKYMILHMRRFTK 422
LF+D +E+NIIPQVPL +L K+DG + E H R RYR+ LP Y+ LH++RF++
Sbjct: 377 LFQDELERNIIPQVPLAAVLAKYDGRSAQE---HHAQRKRYRLLHPLPPYLALHVKRFSQ 433
Query: 423 NNFFVEKNPTLVNFPVK-NLELKDYI-PLP---TPKENEKLRSKYDLIANIVHDG 472
N F E+NPT+V F + L+L Y+ P P P E YDL+AN+VH+
Sbjct: 434 NKFVAERNPTIVTFDARGGLDLAPYVEPCPDAWPPGEP----IWYDLVANVVHEA 484
>gi|321253150|ref|XP_003192646.1| ubiquitin C-terminal hydrolase [Cryptococcus gattii WM276]
gi|317459115|gb|ADV20859.1| Ubiquitin C-terminal hydrolase, putative [Cryptococcus gattii
WM276]
Length = 573
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 187/418 (44%), Positives = 250/418 (59%), Gaps = 63/418 (15%)
Query: 101 VRRDCPYLDTVN---------RQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSH 151
RRD YLDTV+ RQ LDFDFEK CS SLSN+NVYACLVCGKY+QGRG+ S
Sbjct: 79 TRRDM-YLDTVSPDRISFDISRQSLDFDFEKLCSKSLSNINVYACLVCGKYFQGRGKGSW 137
Query: 152 AYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------- 192
AY H++ H V++NL TEK Y LP+GY ++DPSL DI V
Sbjct: 138 AYRHAVGDNHRVWLNLDTEKFYVLPEGYPVSDPSLNDILRVLHPRYNASDIKALSTLPAP 197
Query: 193 --------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPEN--YRHCKSP--LV 234
G+NNIK+ D+ NV I L+ V PLRNF L P + + P LV
Sbjct: 198 SYTLSGQQYIPGFIGVNNIKKNDYCNVVIHLLLHVPPLRNFLLNPNTPELQEERRPTELV 257
Query: 235 HRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
RF L R++W++ FK Q+SPHEFLQ V K S +F+ Q +PVE + WL+NTLH DL
Sbjct: 258 RRFATLARRLWNSHLFKSQISPHEFLQEVSKRSNGKFKTTEQGDPVELLGWLVNTLHRDL 317
Query: 295 RNTKK-NTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFL 353
+KK N+SIIY FQG++++ + + + + D G D +++ PFL
Sbjct: 318 GGSKKRNSSIIYSTFQGKVQIETQ----QVIVHKEYARPVFDIGRDIQTVSS-----PFL 368
Query: 354 MLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYM 413
L LDLP PLF D+ EK IIPQVPL IL KFDG+T E R+ +T LP Y+
Sbjct: 369 FLALDLPITPLFTDMNEKKIIPQVPLSQILAKFDGKTTQEF---GPTLKRHHLTSLPPYL 425
Query: 414 ILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHD 471
ILH++RFTKNNF E+NPT+VNFP++ +E+ +Y+ PK ++ + ++YDL++N+ D
Sbjct: 426 ILHIKRFTKNNFVEERNPTIVNFPLRGVEMSEYV---DPKPSDPMHTQYDLLSNVFLD 480
>gi|389634977|ref|XP_003715141.1| U4/U6.U5 tri-snRNP-associated protein 2 [Magnaporthe oryzae 70-15]
gi|351647474|gb|EHA55334.1| U4/U6.U5 tri-snRNP-associated protein 2 [Magnaporthe oryzae 70-15]
gi|440475631|gb|ELQ44300.1| U4/U6.U5 tri-snRNP-associated protein 2 [Magnaporthe oryzae Y34]
gi|440480835|gb|ELQ61476.1| U4/U6.U5 tri-snRNP-associated protein 2 [Magnaporthe oryzae P131]
Length = 563
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 183/408 (44%), Positives = 250/408 (61%), Gaps = 57/408 (13%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDTV+R VLDFDFEK CSVSLSN+NVYACLVCGKYYQGRG KSHAY H+L+ HHV+IN
Sbjct: 103 YLDTVDRNVLDFDFEKLCSVSLSNINVYACLVCGKYYQGRGPKSHAYFHALDENHHVFIN 162
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------- 192
++T+KVY LP+GYE+ SL+D+++V
Sbjct: 163 MQTQKVYVLPEGYEVRSSSLDDVKYVSDPRYTRDEVARLDRPGKAPMARTLAGKEYAPGF 222
Query: 193 -GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
G+NNIKE D++NV +Q+L V PLRNFFL+ E+ +S LV R L RKIW+ R FK
Sbjct: 223 VGMNNIKENDYLNVVVQALAHVPPLRNFFLL-EDLSQSQSELVRRTATLFRKIWNPRAFK 281
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQ 309
VSPHE LQ V S KRF + QS+PV+F+SW LN LH L TK +S++ FQ
Sbjct: 282 AHVSPHELLQEVSLRSNKRFTLTAQSDPVDFLSWFLNNLHLGLGGSRTKPGSSMVQRVFQ 341
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFK-DV 368
G+++V + +D+ + ++ + + SR FL+L LDLPP PLF+ D
Sbjct: 342 GKVKVESQAITAKADADDRLRFEDAE-------VKVDVSR--FLLLTLDLPPAPLFQDDD 392
Query: 369 MEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTR-LPKYMILHMRRFTKNNFFV 427
E++IIPQV L I+ K+DG + E + R RYR+ LP Y++LH++RF++N F
Sbjct: 393 EERSIIPQVALTTIMAKYDGVSAQEHMN---HRRRYRLMHPLPPYLVLHVKRFSQNKFVS 449
Query: 428 EKNPTLVNFPVKNLELKDYI-PLPT--PKENEKLRSKYDLIANIVHDG 472
E+NPT+V F + L++ Y+ P P P E + Y+L+AN+VH+
Sbjct: 450 ERNPTIVTFDPETLDVSPYVEPDPNHHPATGEPI--IYELVANVVHEA 495
>gi|171693595|ref|XP_001911722.1| hypothetical protein [Podospora anserina S mat+]
gi|170946746|emb|CAP73550.1| unnamed protein product [Podospora anserina S mat+]
Length = 547
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 183/408 (44%), Positives = 246/408 (60%), Gaps = 61/408 (14%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R VLDFDFEK CS+SLSN+NVYACLVCGKY+QGRG KSHAY H+L+ HHVYIN
Sbjct: 80 YLDTIDRNVLDFDFEKLCSISLSNINVYACLVCGKYFQGRGPKSHAYFHALDEDHHVYIN 139
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------G 193
+ T+KVY LP+GYE+ SL+DI++V G
Sbjct: 140 MSTQKVYVLPEGYEVMSKSLDDIKYVSDPRYTRQEVAEFDRKPRTSRTLLGKEYTPGFVG 199
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIKE D++NV +QSL V+PLRN+FL+ + + + LV R L RKIW+ R FK
Sbjct: 200 MNNIKENDYLNVIVQSLSHVSPLRNYFLLEDLSK--RDELVKRTSILFRKIWNPRAFKSH 257
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK--NTSIIYECFQGE 311
VSPHE LQ + S KRF + QS+PVEF+SW LN LH L +K+ ++S I QG+
Sbjct: 258 VSPHELLQEISLRSNKRFTLTAQSDPVEFLSWYLNNLHLGLGGSKRKPHSSPIQHILQGK 317
Query: 312 LEVVKEIPKNTISGNDQNTEKGSDGGD-----DHDNITTETSRMPFLMLGLDLPPPPLFK 366
L+V Q +D D + + T+ SR FL+L LDLPP PLF+
Sbjct: 318 LKV-----------ESQAITAKADASDRLRFEESAQVQTDISR--FLLLTLDLPPAPLFQ 364
Query: 367 DVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTR-LPKYMILHMRRFTKNNF 425
D E NIIPQVPL +L K++G E+ + R RYR+ LP +++ H++RF+KN F
Sbjct: 365 DEQEANIIPQVPLSLLLAKYNGVKAQEL---NAQRKRYRLMHPLPPFLVFHVKRFSKNKF 421
Query: 426 FVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRS-KYDLIANIVHDG 472
E+NPT+V F +NL++ Y+ P P + YDL+AN+VH+
Sbjct: 422 VSERNPTIVTFDARNLDVGPYVE-PDPSHCQPGEPIWYDLVANVVHEA 468
>gi|406700486|gb|EKD03653.1| ubiquitin hydrolase [Trichosporon asahii var. asahii CBS 8904]
Length = 531
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 182/401 (45%), Positives = 242/401 (60%), Gaps = 53/401 (13%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDTV+R LDFDFE+ CS SLSN+NVY CLVCGKY+QGRG+ S AY H++ H V++N
Sbjct: 68 YLDTVSRANLDFDFERLCSKSLSNINVYCCLVCGKYFQGRGRGSWAYRHAVGENHRVWLN 127
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------G 193
L TEK Y LP+GY ++DPSL DI HV G
Sbjct: 128 LATEKFYVLPEGYLVSDPSLNDILHVLNPRFEAASLAGLSDLRPPSLTLEKREYLPGYVG 187
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP----LVHRFGDLTRKIWHARN 249
LNN+K D++NV Q L+ V P+RNFFL P + +S LV R LTR++W+ R
Sbjct: 188 LNNMKANDYLNVITQMLLHVPPIRNFFLNPNTPQLQESARPTELVSRLAALTRRLWNPRL 247
Query: 250 FKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT-KKNTSIIYECF 308
FK QVSPHEF V K S +F Q +PVEF+ WL+NTLH DL T K+N+S+IY F
Sbjct: 248 FKAQVSPHEFFHEVTKRSNGKFTTIEQGDPVEFLGWLINTLHRDLGGTRKRNSSVIYTTF 307
Query: 309 QGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDV 368
QG++++ + I+ D + D E PFL L LDLP PLF+D
Sbjct: 308 QGKVQIETQ---KIITHKDYARPVFEESRD------IERMSSPFLFLALDLPATPLFQDA 358
Query: 369 MEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVE 428
EK IIPQV L +IL KFDG+T E P + R+ + LP Y+ILH++RFTKNNF E
Sbjct: 359 NEKKIIPQVSLASILAKFDGKTTQE-FGPTLK--RHHLQALPPYLILHIKRFTKNNFVEE 415
Query: 429 KNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIV 469
KNPT+VNFP++ ++++ Y+ PK ++ + + YDL++N+V
Sbjct: 416 KNPTIVNFPMRGVDMQPYV---DPKPSDPIMACYDLLSNVV 453
>gi|259482726|tpe|CBF77479.1| TPA: snRNP assembly factor, putative (AFU_orthologue; AFUA_4G07520)
[Aspergillus nidulans FGSC A4]
Length = 616
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 184/412 (44%), Positives = 253/412 (61%), Gaps = 65/412 (15%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+NR +LDFDFEK CSVSLSN+NVYACLVCGKY+QGRG KS+AY H+LE HHV+IN
Sbjct: 111 YLDTINRHILDFDFEKLCSVSLSNINVYACLVCGKYFQGRGPKSYAYFHALEVSHHVFIN 170
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------G 193
+ T+KVY LP+GYE+ + SL+DI++V G
Sbjct: 171 MGTKKVYVLPEGYEVKNKSLDDIKYVVDPYYTKDEVAKLDKVVTDAFDLSGRRYRPGFVG 230
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIK D++NV Q+L V P+RN+FL+ E + LV RFG L RK+W+ + F+
Sbjct: 231 MNNIKANDYLNVVAQALAHVLPIRNYFLLHEFPQPGTPQLVLRFGTLVRKLWNPKAFRSH 290
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK----NTSIIYECFQ 309
VSPHE LQ V S KRF + QS+PVEF+SW LN LH L ++K TS+++ FQ
Sbjct: 291 VSPHELLQEVALRSSKRFTLTQQSDPVEFLSWFLNNLHLALGGSRKPSKTPTSVVHAAFQ 350
Query: 310 GELEVVKEIPKNTISGNDQN-----TEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPL 364
G L + E T + QN TE G+ I ++T+ PFL+L LDLPP PL
Sbjct: 351 GHLRI--ESQAITAHSDTQNARLVFTESGT--------INSQTT--PFLILTLDLPPTPL 398
Query: 365 FKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTR-LPKYMILHMRRFTKN 423
F+ ++IIPQVPL +L K++G T +E + R+R+R+ LP Y++ H++RF+KN
Sbjct: 399 FQSANRESIIPQVPLTTLLNKYNGITASEKL---AHRVRHRLLHPLPPYLMFHIKRFSKN 455
Query: 424 NFFVEKNPTLVNFPV-KNLELKDYIPLPTPK---ENEKLRSKYDLIANIVHD 471
F E+NPT+V FP ++L++ Y+ P P+ E + YDL+ANI+ D
Sbjct: 456 RFVSERNPTIVTFPSPRSLDMSPYVE-PNPEIWPPGEPIL--YDLVANIILD 504
>gi|290974377|ref|XP_002669922.1| predicted protein [Naegleria gruberi]
gi|284083475|gb|EFC37178.1| predicted protein [Naegleria gruberi]
Length = 477
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 179/427 (41%), Positives = 260/427 (60%), Gaps = 60/427 (14%)
Query: 104 DCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHV 163
+CPYLDT+NR+VLDFDFEK CS +LSN NVY CLV GK+++G+G+ + AY HSL HH+
Sbjct: 43 ECPYLDTINRKVLDFDFEKVCSETLSNTNVYCCLVDGKFFKGKGESTPAYIHSLNEDHHL 102
Query: 164 YINLRTEKVYCLPDGYEINDPSLEDIRH-------------------------------- 191
++++ K+YCLPD YE+ND SLEDI+
Sbjct: 103 FMSISNGKIYCLPDNYEVNDKSLEDIKFNLNPTYSEKDVEELDIQLKTVTSISNGATFMP 162
Query: 192 --VGLNNIKE-TDFVNVTIQSLMRVTPLRNFFLIPE-NYRHCKSPLVHRFGDLTRKIWHA 247
VGLN+IK+ TD +NV IQ+L R+ P+R+FFL+ + N KS V F +L RKIW+
Sbjct: 163 GFVGLNSIKQSTDGINVAIQALTRIKPVRDFFLLDQKNLSKVKSRSVLLFSELLRKIWNP 222
Query: 248 RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR-NTKKNTSIIYE 306
+NFK V+P EF+Q+++ ++ K+F++G +PV+F +WLLN LH +L N K SII E
Sbjct: 223 KNFKNHVNPLEFVQSIL-SNAKQFKLGESIDPVQFFTWLLNYLHGELTDNQPKQKSIISE 281
Query: 307 CFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFK 366
F+G + + ++ K SG G+D + TT + PF+ L LD+P P+FK
Sbjct: 282 SFRGRITITSKVIKRKKSG-------GADKKQVEE--TTSQNTTPFMFLTLDVPSAPIFK 332
Query: 367 DVMEKNIIPQVPLFNILKKFDGETVTEVVR--PHVARMRYRVTRLPKYMILHMRRFTKNN 424
D E+NI+PQV LF++L KF+GE T V +V +Y++ +LP Y++ H++RF+KN
Sbjct: 333 DEYERNILPQVSLFSLLSKFNGEKETAVPLNDGNVEMRKYKIEKLPPYLVFHVKRFSKNF 392
Query: 425 FFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQ 484
FF EKN T+VNFP+ NL++ + P + S Y+L+ANI HD G Y++ V
Sbjct: 393 FFEEKNNTIVNFPLNNLDISEIAP-------DYSGSHYNLVANICHD----GSVYKIHVH 441
Query: 485 RKSEELW 491
+E W
Sbjct: 442 NVAEGKW 448
>gi|350632101|gb|EHA20469.1| hypothetical protein ASPNIDRAFT_44214 [Aspergillus niger ATCC 1015]
Length = 616
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 207/497 (41%), Positives = 285/497 (57%), Gaps = 83/497 (16%)
Query: 31 PRLGFENPLLPLANTYDDDDEEEEYGGR---------GDSGAKVGQNGRTGEDDDEDKDE 81
PR G LP+ EE E G+ G+ A+ Q+G E D D D+
Sbjct: 36 PRRG----ALPIRRATGQQLEEHERSGQDILAAADQEGEELAEAAQDGGP-ESSDIDADD 90
Query: 82 DEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGK 141
D+ +A ++S +E D YLDT+NR++LDFDFEK CSVSLSN+NVYACLVCGK
Sbjct: 91 DKPVIA---APKRQSAPMEGYSDL-YLDTINREILDFDFEKLCSVSLSNINVYACLVCGK 146
Query: 142 YYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV--------- 192
Y+QGRG KSHAY H+LE GHHV++N+ T+KVY LP+GYE+ + SL+DI++V
Sbjct: 147 YFQGRGPKSHAYFHALEVGHHVFVNMGTKKVYVLPEGYEVKNQSLDDIKYVVDPYYSKDE 206
Query: 193 ------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRH 228
G+NNIK D++NV +Q L V P+RN+FL+ E +
Sbjct: 207 VMKLDKEVHDAFDLAGNRYRPGFVGMNNIKANDYLNVVVQLLAHVFPIRNYFLLHEFPQP 266
Query: 229 CKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLN 288
L RF L RK+W+ + F+ VSPHE LQ + S KRF + QS+PVEFMSW LN
Sbjct: 267 GTPQLALRFSTLVRKLWNPKAFRSHVSPHELLQEIALRSSKRFTLTQQSDPVEFMSWFLN 326
Query: 289 TLHSDLRNTKK----NTSIIYECFQGELEVVKEIPKNTISGNDQN-----TEKGSDGGDD 339
LH L +KK TS++ FQG L + E T + QN TE GS
Sbjct: 327 NLHLSLGGSKKPSKAPTSVVQAAFQGHLRI--ESQAITAHSDTQNARLVFTESGS----- 379
Query: 340 HDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHV 399
I ++T+ PFL+L LDLPP PLF+ ++IIPQVPL +L K++G T +E +
Sbjct: 380 ---INSQTT--PFLILTLDLPPTPLFQSANRESIIPQVPLTTLLNKYNGITASEKL---A 431
Query: 400 ARMRYR-VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPV-KNLELKDYIPLPTPK---E 454
R+R+R + LP Y++ H++RF+KN F E+NPT+V FP ++L++ Y+ P P+
Sbjct: 432 HRVRHRLLHPLPPYLLFHIKRFSKNRFVSERNPTIVTFPSPRSLDMSPYVE-PNPEIWPP 490
Query: 455 NEKLRSKYDLIANIVHD 471
E + YDL+ANI+ D
Sbjct: 491 GEPIL--YDLVANIILD 505
>gi|358366048|dbj|GAA82669.1| snRNP assembly factor [Aspergillus kawachii IFO 4308]
Length = 616
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 208/504 (41%), Positives = 290/504 (57%), Gaps = 83/504 (16%)
Query: 24 EQSSPSPPRLGFENPLLPLANTYDDDDEEEEYGGR---------GDSGAKVGQNGRTGED 74
E+ S + PR G LP+ + EE E G+ G+ A+ Q+G E
Sbjct: 29 EELSENDPRRG----ALPIRRATGQELEEHERSGQNILAAADQEGEELAEAAQDGGP-ES 83
Query: 75 DDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVY 134
D D D+D+ +A ++S +E D YLDT+NR++LDFDFEK CSVSLSN+NVY
Sbjct: 84 SDVDADDDKPVIA---APKRQSAPMEGYSDL-YLDTINREILDFDFEKLCSVSLSNINVY 139
Query: 135 ACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV-- 192
ACLVCGKY+QGRG KSHAY H+LE GHHV++N+ T+KVY LP+GYE+ + SL+DI++V
Sbjct: 140 ACLVCGKYFQGRGPKSHAYFHALEVGHHVFVNMGTKKVYVLPEGYEVKNQSLDDIKYVVD 199
Query: 193 -------------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFL 221
G+NNIK D++NV +Q L V P+RN+FL
Sbjct: 200 PYYNKDEVMKLDKEVHDAFDLAGNRYRPGFVGMNNIKANDYLNVVVQLLAHVFPIRNYFL 259
Query: 222 IPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVE 281
+ E + L RF L RK+W+ + F+ VSPHE LQ + S KRF + QS+PV+
Sbjct: 260 LHEFPQPGTPQLALRFSTLVRKLWNPKAFRSHVSPHELLQEIALRSSKRFTLTQQSDPVD 319
Query: 282 FMSWLLNTLHSDLRNTKK----NTSIIYECFQGELEVVKEIPKNTISGNDQN-----TEK 332
FMSW LN LH L +KK TS++ FQG L + E T + QN TE
Sbjct: 320 FMSWFLNNLHLSLGGSKKPSKTPTSVVQAAFQGHLRI--ESQAITAHSDTQNARLVFTES 377
Query: 333 GSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVT 392
GS I ++T+ PFL+L LDLPP PLF+ ++IIPQVPL +L K++G T +
Sbjct: 378 GS--------INSQTT--PFLILTLDLPPTPLFQSANRESIIPQVPLTTLLNKYNGITAS 427
Query: 393 EVVRPHVARMRYR-VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPV-KNLELKDYIPLP 450
E + R+R+R + LP Y++ H++RF+KN F E+NPT+V FP ++L++ Y+ P
Sbjct: 428 EKL---AHRVRHRLLHPLPPYLLFHIKRFSKNRFVSERNPTIVTFPSPRSLDMSPYVE-P 483
Query: 451 TPK---ENEKLRSKYDLIANIVHD 471
P+ E + YDL+ANI+ D
Sbjct: 484 NPEIWPPGEPIL--YDLVANIILD 505
>gi|317038065|ref|XP_001401556.2| snRNP assembly factor [Aspergillus niger CBS 513.88]
Length = 616
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 207/497 (41%), Positives = 285/497 (57%), Gaps = 83/497 (16%)
Query: 31 PRLGFENPLLPLANTYDDDDEEEEYGGR---------GDSGAKVGQNGRTGEDDDEDKDE 81
PR G LP+ EE E G+ G+ A+ Q+G E D D D+
Sbjct: 36 PRRG----ALPIRRATGQQLEEHERSGQDILAAADQEGEELAEAAQDGGP-ESSDIDADD 90
Query: 82 DEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGK 141
D+ +A ++S +E D YLDT+NR++LDFDFEK CSVSLSN+NVYACLVCGK
Sbjct: 91 DKPVIA---APKRQSAPMEGYSDL-YLDTINREILDFDFEKLCSVSLSNINVYACLVCGK 146
Query: 142 YYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV--------- 192
Y+QGRG KSHAY H+LE GHHV++N+ T+KVY LP+GYE+ + SL+DI++V
Sbjct: 147 YFQGRGPKSHAYFHALEVGHHVFVNMGTKKVYVLPEGYEVKNQSLDDIKYVVDPYYSKDE 206
Query: 193 ------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRH 228
G+NNIK D++NV +Q L V P+RN+FL+ E +
Sbjct: 207 VMKLDKEVHDAFDLAGNRYRPGFVGMNNIKANDYLNVVVQLLAHVFPIRNYFLLHEFPQP 266
Query: 229 CKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLN 288
L RF L RK+W+ + F+ VSPHE LQ + S KRF + QS+PVEFMSW LN
Sbjct: 267 GTPQLALRFSTLVRKLWNPKAFRSHVSPHELLQEIALRSSKRFTLTQQSDPVEFMSWFLN 326
Query: 289 TLHSDLRNTKK----NTSIIYECFQGELEVVKEIPKNTISGNDQN-----TEKGSDGGDD 339
LH L +KK TS++ FQG L + E T + QN TE GS
Sbjct: 327 NLHLSLGGSKKPSKTPTSVVQAAFQGHLRI--ESQAITAHSDTQNARLVFTESGS----- 379
Query: 340 HDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHV 399
I ++T+ PFL+L LDLPP PLF+ ++IIPQVPL +L K++G T +E +
Sbjct: 380 ---INSQTT--PFLILTLDLPPTPLFQSANRESIIPQVPLTTLLNKYNGITASEKL---A 431
Query: 400 ARMRYR-VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPV-KNLELKDYIPLPTPK---E 454
R+R+R + LP Y++ H++RF+KN F E+NPT+V FP ++L++ Y+ P P+
Sbjct: 432 HRVRHRLLHPLPPYLLFHIKRFSKNRFVSERNPTIVTFPSPRSLDMSPYVE-PNPEIWPP 490
Query: 455 NEKLRSKYDLIANIVHD 471
E + YDL+ANI+ D
Sbjct: 491 GEPIL--YDLVANIILD 505
>gi|134058466|emb|CAL00675.1| unnamed protein product [Aspergillus niger]
Length = 577
Score = 330 bits (846), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 207/497 (41%), Positives = 285/497 (57%), Gaps = 83/497 (16%)
Query: 31 PRLGFENPLLPLANTYDDDDEEEEYGGR---------GDSGAKVGQNGRTGEDDDEDKDE 81
PR G LP+ EE E G+ G+ A+ Q+G E D D D+
Sbjct: 36 PRRG----ALPIRRATGQQLEEHERSGQDILAAADQEGEELAEAAQDG-GPESSDIDADD 90
Query: 82 DEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGK 141
D+ +A ++S +E D YLDT+NR++LDFDFEK CSVSLSN+NVYACLVCGK
Sbjct: 91 DKPVIA---APKRQSAPMEGYSDL-YLDTINREILDFDFEKLCSVSLSNINVYACLVCGK 146
Query: 142 YYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV--------- 192
Y+QGRG KSHAY H+LE GHHV++N+ T+KVY LP+GYE+ + SL+DI++V
Sbjct: 147 YFQGRGPKSHAYFHALEVGHHVFVNMGTKKVYVLPEGYEVKNQSLDDIKYVVDPYYSKDE 206
Query: 193 ------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRH 228
G+NNIK D++NV +Q L V P+RN+FL+ E +
Sbjct: 207 VMKLDKEVHDAFDLAGNRYRPGFVGMNNIKANDYLNVVVQLLAHVFPIRNYFLLHEFPQP 266
Query: 229 CKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLN 288
L RF L RK+W+ + F+ VSPHE LQ + S KRF + QS+PVEFMSW LN
Sbjct: 267 GTPQLALRFSTLVRKLWNPKAFRSHVSPHELLQEIALRSSKRFTLTQQSDPVEFMSWFLN 326
Query: 289 TLHSDLRNTKK----NTSIIYECFQGELEVVKEIPKNTISGNDQN-----TEKGSDGGDD 339
LH L +KK TS++ FQG L + E T + QN TE GS
Sbjct: 327 NLHLSLGGSKKPSKTPTSVVQAAFQGHLRI--ESQAITAHSDTQNARLVFTESGS----- 379
Query: 340 HDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHV 399
I ++T+ PFL+L LDLPP PLF+ ++IIPQVPL +L K++G T +E +
Sbjct: 380 ---INSQTT--PFLILTLDLPPTPLFQSANRESIIPQVPLTTLLNKYNGITASEKL---A 431
Query: 400 ARMRYR-VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPV-KNLELKDYIPLPTPK---E 454
R+R+R + LP Y++ H++RF+KN F E+NPT+V FP ++L++ Y+ P P+
Sbjct: 432 HRVRHRLLHPLPPYLLFHIKRFSKNRFVSERNPTIVTFPSPRSLDMSPYVE-PNPEIWPP 490
Query: 455 NEKLRSKYDLIANIVHD 471
E + YDL+ANI+ D
Sbjct: 491 GEPIL--YDLVANIILD 505
>gi|212537605|ref|XP_002148958.1| snRNP assembly factor, putative [Talaromyces marneffei ATCC 18224]
gi|210068700|gb|EEA22791.1| snRNP assembly factor, putative [Talaromyces marneffei ATCC 18224]
Length = 612
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 196/443 (44%), Positives = 263/443 (59%), Gaps = 61/443 (13%)
Query: 73 EDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLN 132
E + D DE+E LA Q Q VE D YLDT+NR VLDFDFEK CSVSLSN+N
Sbjct: 71 ESPEADDDEEEAQLAVPQRQSQP---VEGYGDL-YLDTINRAVLDFDFEKLCSVSLSNIN 126
Query: 133 VYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV 192
VYACLVCGKY+QGRG KSHAY H+LE GHHV++N+ T+KVY LP+GYE+ SL+DI++V
Sbjct: 127 VYACLVCGKYFQGRGNKSHAYFHALEIGHHVFVNMETKKVYVLPEGYEVKSKSLDDIKYV 186
Query: 193 ---------------------------------GLNNIKETDFVNVTIQSLMRVTPLRNF 219
G+NNIK D++NV +Q L VTP+RNF
Sbjct: 187 VDPTFTKNDVLKLDKEVRDAWDLLGKKYRPGYVGMNNIKANDYLNVVVQVLAHVTPIRNF 246
Query: 220 FLIPENYRHCKSP-LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSN 278
FL+ +N+ SP L RF L RK+W+ + FK VSPHE LQ + S KRF + QS+
Sbjct: 247 FLL-QNFPVPGSPQLSVRFSTLVRKLWNPKAFKSHVSPHELLQEIALRSSKRFTLTHQSD 305
Query: 279 PVEFMSWLLNTLHSDLRNTKK----NTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGS 334
PVEF+SW LN LH L +KK TS+I + FQG L I I+ + T
Sbjct: 306 PVEFLSWFLNNLHLTLGGSKKPSKAPTSVIQQAFQGHL----RIESQAITAHSDTTNSRL 361
Query: 335 DGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEV 394
+ + T T PFL+L LDLPP PLF+ ++IIPQ+PL +L K++G T +E
Sbjct: 362 VFAESSE---TNTQTSPFLILTLDLPPTPLFQSANRESIIPQIPLTTLLNKYNGITASEK 418
Query: 395 VRPHVARMRYR-VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPV-KNLELKDYIPLPTP 452
+ R+R+R + LP Y++ H++RF+KN F E+NPT+V FP ++L++ Y+ P P
Sbjct: 419 LS---HRVRHRLLHPLPPYLLFHIKRFSKNKFVSERNPTIVTFPSPRSLDMSPYVE-PNP 474
Query: 453 K---ENEKLRSKYDLIANIVHDG 472
+ E + YDL++NI+ D
Sbjct: 475 QLWPPGEPI--IYDLVSNIILDA 495
>gi|449295218|gb|EMC91240.1| hypothetical protein BAUCODRAFT_39392 [Baudoinia compniacensis UAMH
10762]
Length = 561
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 198/492 (40%), Positives = 277/492 (56%), Gaps = 78/492 (15%)
Query: 26 SSPSPPRLGFENPLLPLANTYDDDDEEEEYGGRGDSGAKVGQNGRT-GEDDDEDKDEDED 84
S P+PP E DD D G G +GRT G ++ ED DE+
Sbjct: 33 SRPAPPAASSE------WRENDDSDGNGTINGEG--------SGRTPGHENHEDGTADEE 78
Query: 85 DLANGYGQGQRSRLV--EVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKY 142
+ +G SR + R YLDT++R+ +DFDFEK CS++L+N+NVYACLVCGKY
Sbjct: 79 EDDIDEPRGSSSRPAAPDERYSDLYLDTISRKNMDFDFEKLCSITLANINVYACLVCGKY 138
Query: 143 YQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIR------------ 190
+ GRG K+ AY H+LE GHHVYIN+ T++VY LP+GYE+ SL+DI+
Sbjct: 139 FSGRGPKTPAYFHALEIGHHVYINMETKRVYVLPEGYEVKSKSLDDIKIVVDPRFAPEDV 198
Query: 191 ---------------------HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHC 229
VG+NNIK D++NV +Q+L+ V PLRNFF++ +
Sbjct: 199 KALDRRKEPSWDLFGKKYIPGFVGMNNIKANDYLNVVVQALVHVPPLRNFFMLED--LSS 256
Query: 230 KSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNT 289
K L RF LTRKIW+ + FK VSPHE +Q + S K+F + Q++PVEF+SW LN
Sbjct: 257 KPQLAQRFSILTRKIWNPKAFKSHVSPHELIQEISLRSSKKFLLTEQADPVEFLSWFLNH 316
Query: 290 LHSDL--RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGD--DHDNITT 345
LH L TK +S++ + FQG+L V Q +D GD ++
Sbjct: 317 LHLSLGGSKTKPRSSLVQKIFQGQLRV-----------ESQTITAHADAGDRLRFEDAAI 365
Query: 346 ETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYR 405
++ PF++L LDLPP PLF+D EKNIIPQVPL +L+K++G T E + RMRYR
Sbjct: 366 KSQSTPFMILTLDLPPAPLFQDDAEKNIIPQVPLSTVLQKYNGITAQERMN---TRMRYR 422
Query: 406 VTR-LPKYMILHMRRFTKNNFF-VEKNPTLVNFPVKNLELKDYIPLPTPKEN---EKLRS 460
+ LP Y+I+H++RF N F ++NPT+V F + L++ Y+ P P+ + E L
Sbjct: 423 LLHPLPAYLIMHIKRFQPNKFLQSQRNPTIVTFNPRALDMSPYVE-PNPQCHPLGEPL-- 479
Query: 461 KYDLIANIVHDG 472
YDL+ANI ++G
Sbjct: 480 VYDLVANITYEG 491
>gi|401882743|gb|EJT46987.1| ubiquitin hydrolase [Trichosporon asahii var. asahii CBS 2479]
Length = 531
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 181/401 (45%), Positives = 241/401 (60%), Gaps = 53/401 (13%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDTV+R LDFDFE+ CS SLSN+NVY CLVCGKY+QGRG+ S AY H++ H V++N
Sbjct: 68 YLDTVSRANLDFDFERLCSKSLSNINVYCCLVCGKYFQGRGRGSWAYRHAVGENHRVWLN 127
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------G 193
L TEK Y LP+GY ++DPSL DI HV G
Sbjct: 128 LATEKFYVLPEGYLVSDPSLNDILHVLNPRFEAASLAGLSDLRPPSLTLEKREYLPGYVG 187
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP----LVHRFGDLTRKIWHARN 249
LNN+K D++NV Q L+ V P+RNFFL P + +S LV R LTR++W+ R
Sbjct: 188 LNNMKANDYLNVITQMLLHVPPIRNFFLNPNTPQLQESARPTELVSRLAALTRRLWNPRL 247
Query: 250 FKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT-KKNTSIIYECF 308
FK QVSPHEF V K S +F Q +PVEF+ WL+NTLH L T K+N+S+IY F
Sbjct: 248 FKAQVSPHEFFHEVTKRSNGKFTTIEQGDPVEFLGWLINTLHRGLGGTRKRNSSVIYTTF 307
Query: 309 QGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDV 368
QG++++ + I+ D + D E PFL L LDLP PLF+D
Sbjct: 308 QGKVQIETQ---KIITHKDYARPVFEESRD------IERMSSPFLFLALDLPATPLFQDA 358
Query: 369 MEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVE 428
EK IIPQV L +IL KFDG+T E P + R+ + LP Y+ILH++RFTKNNF E
Sbjct: 359 NEKKIIPQVSLASILAKFDGKTTQE-FGPTLK--RHHLQALPPYLILHIKRFTKNNFVEE 415
Query: 429 KNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIV 469
KNPT+VNFP++ ++++ Y+ PK ++ + + YDL++N+V
Sbjct: 416 KNPTIVNFPMRGVDMQPYV---DPKPSDPIMACYDLLSNVV 453
>gi|255950052|ref|XP_002565793.1| Pc22g18900 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592810|emb|CAP99178.1| Pc22g18900 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 609
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 191/441 (43%), Positives = 258/441 (58%), Gaps = 69/441 (15%)
Query: 78 DKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACL 137
D DED L+ ++S +E D YLDT+NR++LDFDFEK CSVSLSN+NVYACL
Sbjct: 81 DIDEDAPALS---APKRQSAPMEGYGDL-YLDTINREILDFDFEKLCSVSLSNINVYACL 136
Query: 138 VCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV----- 192
VCGKY+QGRG KSHAY H+LE GHHV+IN+ T+KVY LP+GYE+N+ SLEDI++V
Sbjct: 137 VCGKYFQGRGPKSHAYFHALEVGHHVFINIGTKKVYVLPEGYEVNNKSLEDIKYVVDPHY 196
Query: 193 ----------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE 224
G+NNIK D+VNV Q L V P+RNFFL+ E
Sbjct: 197 TKNQVVKLDKEVHDAWDLSGSRYRPGFVGMNNIKANDYVNVVAQLLAHVLPIRNFFLLHE 256
Query: 225 NYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMS 284
++ RF L RK+W+ + F+ VSPHE LQ V S KRF + Q++PV+F+S
Sbjct: 257 FPTPGTPEIILRFSTLVRKLWNPKAFRSHVSPHELLQEVAVRSSKRFTLTNQADPVDFLS 316
Query: 285 WLLNTLHSDLRNTKK----NTSIIYECFQGELEVVKEIPKNTISGNDQN-----TEKGSD 335
W LN+LH L +KK TS+++ FQG + + E T + QN TE G
Sbjct: 317 WFLNSLHLALGGSKKPSPTPTSVVHAAFQGRVRI--ESQAITAHSDTQNARLVFTESG-- 372
Query: 336 GGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVV 395
T + PFL+L LDLPP PLF+ ++ IPQVPL +L K++G T +E +
Sbjct: 373 --------TINSQVTPFLILTLDLPPTPLFQSANRESSIPQVPLTTLLNKYNGYTASEKL 424
Query: 396 RPHVARMRYRVTR-LPKYMILHMRRFTKNNFFVEKNPTLVNFPVKN-LELKDYIPLPTPK 453
R+R+R+ LP Y+ H++RF+KN F E+NPT+V FP + L++ Y+ P
Sbjct: 425 ---AHRVRHRLLHPLPPYLFFHIKRFSKNRFVSERNPTIVTFPSPHGLDMSPYV---EPN 478
Query: 454 ENEKLRSK---YDLIANIVHD 471
N S+ YDL+ANI+ D
Sbjct: 479 PNICSPSEPILYDLVANIILD 499
>gi|406863087|gb|EKD16135.1| U4/U6.U5 tri-snRNP-associated protein 2 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 928
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 193/428 (45%), Positives = 256/428 (59%), Gaps = 72/428 (16%)
Query: 97 RLVEVRRDCP-------YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQK 149
R VR++ P YLDT+NR VLDFDFEK CS+SLSN+NVYACLVCGKYYQGRG K
Sbjct: 448 RKAPVRQEAPMEGFDDLYLDTINRGVLDFDFEKLCSISLSNINVYACLVCGKYYQGRGPK 507
Query: 150 SHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV----------------- 192
SHAY H+LE GHHVYIN++T+KVY LP+GYE+ + SL+DI+ V
Sbjct: 508 SHAYFHALEVGHHVYINMQTQKVYVLPEGYEVKNKSLDDIKFVSDPRYSKEEVMSLDRPG 567
Query: 193 ------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-L 233
G+NNIKE D+ NV +Q+L V PLRN+ L+ E++ K+P L
Sbjct: 568 AKDKAWALGGKEYSPGFVGMNNIKENDYFNVVVQALSHVPPLRNYLLL-EDF--SKAPEL 624
Query: 234 VHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSD 293
V R L RKIW+ R FK VSPHE LQ + S K+F + QS+PV+F+SW LN LH
Sbjct: 625 VKRLSILVRKIWNPRAFKSHVSPHELLQEISLKSNKKFTLTTQSDPVDFLSWFLNNLHLA 684
Query: 294 L--RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGD-----DHDNITTE 346
L TK +S++ FQG+L+V Q +D GD + ++ T+
Sbjct: 685 LGGSKTKPGSSMVQRVFQGKLKV-----------ESQAITAKADAGDRLRFEEAASVQTD 733
Query: 347 TSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYR- 405
+R F+ L LDLP PLF+D ++ NIIPQVPL +IL K+DG E + R RYR
Sbjct: 734 VNR--FMFLTLDLPAAPLFQDELDANIIPQVPLTSILSKYDGRQAQEHLN---MRKRYRL 788
Query: 406 VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRS-KYDL 464
+ LP +++ H++RF+KN F E+NPT+V F +NL+L Y+ P PK + YDL
Sbjct: 789 LHPLPPFLLFHVKRFSKNKFVEERNPTIVTFDARNLDLSPYVE-PDPKVHAMGEPIWYDL 847
Query: 465 IANIVHDG 472
+ANIVH+
Sbjct: 848 VANIVHEA 855
>gi|331223751|ref|XP_003324548.1| hypothetical protein PGTG_05354 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309303538|gb|EFP80129.1| hypothetical protein PGTG_05354 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 715
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 183/417 (43%), Positives = 249/417 (59%), Gaps = 63/417 (15%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDTVNR +LDFDFE+ CSV+LSN+N+YACLVCGKY+QGR + S AY HS+ HHV+IN
Sbjct: 188 YLDTVNRDMLDFDFERLCSVTLSNINIYACLVCGKYFQGRSRTSPAYAHSIGEDHHVFIN 247
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRH----------------------------------V 192
L +EKVY LPDGYE++DPSL+DI++ V
Sbjct: 248 LLSEKVYVLPDGYEVSDPSLDDIKYLLNPTFTPGLLRKLDAGSQGPSYDLHAVAYLPGFV 307
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY----RHCKSPLVHRFGDLTRKIWHAR 248
GLNNIK D++NV + L V P+R++F+ + R S LV RFG L RKIW+ R
Sbjct: 308 GLNNIKANDYLNVIVHLLAHVPPVRDYFVCRSSEGSFERARASELVQRFGTLMRKIWNPR 367
Query: 249 NFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK---------- 298
FK QVSPHEF Q V S +F + Q++PVEF+ WLLNTLH DL +K
Sbjct: 368 AFKAQVSPHEFGQEVATRSGGKFTLTDQADPVEFLGWLLNTLHRDLGGSKASGRKAVVKA 427
Query: 299 KNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM---PFLML 355
K+TSII+ F+G VVK + ++ D G G +I + R+ F+ L
Sbjct: 428 KDTSIIHAAFRG---VVKVEEQEIVAIPD----SGEVGKRPQFDINQDGRRLIESTFMFL 480
Query: 356 GLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMIL 415
LDLPPPP+F+D ++KNIIPQV L +L+K+DG + E R + R + +RLP+++IL
Sbjct: 481 TLDLPPPPVFQDSVQKNIIPQVNLTTLLQKYDGSSKVE--RSGILRT-HSCSRLPEFIIL 537
Query: 416 HMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSK--YDLIANIVH 470
H +RF N+F EKNPT+VNFP K ++ + P + E + S+ YDL+ N+ +
Sbjct: 538 HFKRFGSNSFIEEKNPTIVNFPTKGVDFSVCLGANQPPQPEGVPSEYLYDLLGNVTY 594
>gi|425781824|gb|EKV19768.1| hypothetical protein PDIG_01090 [Penicillium digitatum PHI26]
gi|425782954|gb|EKV20832.1| hypothetical protein PDIP_12410 [Penicillium digitatum Pd1]
Length = 608
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 182/412 (44%), Positives = 245/412 (59%), Gaps = 65/412 (15%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+NR++LDFDFEK CS+SLSN+NVYACLVCGKY+QGRG KSHAY H+LE GHHV+IN
Sbjct: 105 YLDTINREILDFDFEKLCSISLSNINVYACLVCGKYFQGRGPKSHAYFHALEVGHHVFIN 164
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------G 193
+ T+KVY LP+GYE+N+ SLEDI++V G
Sbjct: 165 IGTKKVYVLPEGYEVNNKSLEDIKYVVDPHYTKNQVIKLDKEVHDAWDLSGSRYRPGFVG 224
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIK D+VNV Q L V P+RNFFL+ E ++ RF L RK+W+ + F+
Sbjct: 225 MNNIKANDYVNVVAQLLAHVLPIRNFFLLHEFPTPGTPEIILRFSTLVRKLWNPKAFRSH 284
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK----NTSIIYECFQ 309
VSPHE LQ + S KRF + Q++PV+F+SW LN LH L +KK TS+++ FQ
Sbjct: 285 VSPHELLQEIALRSSKRFTLTNQADPVDFLSWFLNCLHLALGGSKKPSSTPTSVVHAAFQ 344
Query: 310 GELEVVKEIPKNTISGNDQN-----TEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPL 364
G + + E T + QN TE G T + PFL+L LDLPP PL
Sbjct: 345 GRVRI--ESQAITAHSDTQNARLVFTESG----------TINSQVTPFLILTLDLPPTPL 392
Query: 365 FKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTR-LPKYMILHMRRFTKN 423
F+ ++ IPQVPL +L K++G T +E + R+R+R+ LP Y+ H++RF+KN
Sbjct: 393 FQSANRESSIPQVPLTTLLNKYNGYTASEKL---AHRVRHRLLHPLPPYLFFHIKRFSKN 449
Query: 424 NFFVEKNPTLVNFPV-KNLELKDYIPLPTP---KENEKLRSKYDLIANIVHD 471
F E+NPT+V FP NL++ Y+ P P E + YDL+ANI+ D
Sbjct: 450 RFVSERNPTIVTFPSPHNLDMSPYVE-PNPNICSPGEPIL--YDLVANIILD 498
>gi|398395581|ref|XP_003851249.1| hypothetical protein MYCGRDRAFT_110099 [Zymoseptoria tritici
IPO323]
gi|339471128|gb|EGP86225.1| hypothetical protein MYCGRDRAFT_110099 [Zymoseptoria tritici
IPO323]
Length = 533
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 180/411 (43%), Positives = 251/411 (61%), Gaps = 66/411 (16%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R LDFDFEK CSV+LSN+NVYACLVCGKY+ GRG K+ AY H+LE GHHVYIN
Sbjct: 78 YLDTISRTRLDFDFEKLCSVTLSNINVYACLVCGKYFSGRGHKTPAYFHALEEGHHVYIN 137
Query: 167 LRTEKVYCLPDGYEINDPSLEDIR---------------------------------HVG 193
+ T+KV+ LP+GYE+ + SL+DI+ VG
Sbjct: 138 METKKVWVLPEGYEVKNKSLDDIKVVVDPRFTQEEVKTLDKEPKPAWDLLGKKYIPGFVG 197
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
LNNIK D++NV +Q+L VTPLRNF ++ + + LV RF L RKIW+++ FK
Sbjct: 198 LNNIKANDYLNVVVQALSHVTPLRNFLMLED--LSSRPQLVQRFSVLVRKIWNSKAFKSH 255
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGE 311
VSPHE +Q V S K+F + Q++PV+F+SW LN LH L TK ++S++ + FQG
Sbjct: 256 VSPHELIQEVALRSNKKFLLTEQADPVDFLSWFLNNLHLSLGGSKTKSHSSLVQKIFQGT 315
Query: 312 LEVVKEIPKNTISGNDQNTEKGSDGGD-----DHDNITTETSRMPFLMLGLDLPPPPLFK 366
L + Q+ +D GD D I ++TS PF++L LDLPP PLF+
Sbjct: 316 LRI-----------ESQSISARADAGDRLRFEDAGVIKSQTS--PFMILTLDLPPAPLFQ 362
Query: 367 DVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTR-LPKYMILHMRRFTKNNF 425
D +EKNIIPQV L +L+K++G T E + RMRYR+ LP ++I+H++RF N F
Sbjct: 363 DDVEKNIIPQVSLTTVLQKYNGITAQERLN---TRMRYRLQHPLPPFLIMHVKRFASNKF 419
Query: 426 F-VEKNPTLVNFPVKNLELKDYIPLPTPKEN---EKLRSKYDLIANIVHDG 472
++NPT+V F ++L++ Y+ P PK + E L YDL+AN+ ++G
Sbjct: 420 LQAQRNPTIVTFNPRSLDMSPYVE-PDPKIHPIGEPL--VYDLVANVTYEG 467
>gi|402592787|gb|EJW86714.1| U4/U6.U5 tri-snRNP-associated protein 2 [Wuchereria bancrofti]
Length = 690
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 186/447 (41%), Positives = 255/447 (57%), Gaps = 77/447 (17%)
Query: 94 QRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAY 153
+++++ + R CPYLDT++R LDFDFEK CSVSLS++NVYAC+VCGKY+QGRG +HAY
Sbjct: 219 KKAQIEKPSRQCPYLDTIDRCALDFDFEKLCSVSLSHINVYACMVCGKYFQGRGTSTHAY 278
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV--------------------- 192
THSL+ H V++NL T K YCLPD YEI DPSL+DI++V
Sbjct: 279 THSLDTNHRVFLNLSTLKFYCLPDNYEIIDPSLDDIKYVLKPTYTTKYIMEIDKIGKMAR 338
Query: 193 ------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------L 233
GLNNIK D+ NV + +L V PLR++FL E+Y + K P L
Sbjct: 339 AFDGTTYHPGVVGLNNIKANDYENVVLHALSHVPPLRDYFLREESYINIKRPPGDKLTLL 398
Query: 234 VHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSD 293
RFG+L RK+W+ + FK VSPHE LQA + S K+F+I Q + EF+++LLNTLH
Sbjct: 399 PKRFGELIRKLWNPKAFKAHVSPHEMLQASVLCSNKKFQITRQGDAAEFLNFLLNTLHIA 458
Query: 294 LRNTKK-NTSIIYECFQGELE--VVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM 350
L T+K ++SIIY+ F+G L K IP T TE+ + D + +
Sbjct: 459 LNGTRKTSSSIIYKIFRGRLHEFTRKVIPVET-------TEEARKTLLETDEYKEKKLEI 511
Query: 351 PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARM-RYRVTRL 409
PFL L LDLP PL++D + +NIIPQVPL +L KF+G T E M R+++ RL
Sbjct: 512 PFLYLTLDLPAAPLYRDELLQNIIPQVPLSVLLTKFNGATEKEYKTYSENFMKRFQLVRL 571
Query: 410 PKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLR-----SKYDL 464
P Y+I+ +RF KN N++L D + E++R + YDL
Sbjct: 572 PPYLIITYKRFHKNQC--------------NVDLYDCLA-------EEMRPLHKYTTYDL 610
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++NIVHDG P G YR+ + + W
Sbjct: 611 VSNIVHDGPPSAGSYRIQILHNGTQKW 637
>gi|71031494|ref|XP_765389.1| ubiquitin carboxyl-terminal hydrolase [Theileria parva strain
Muguga]
gi|68352345|gb|EAN33106.1| ubiquitin carboxyl-terminal hydrolase, putative [Theileria parva]
Length = 537
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 172/401 (42%), Positives = 244/401 (60%), Gaps = 62/401 (15%)
Query: 104 DCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHV 163
+CPYL T+NR +LDFDFEK CS++LSN++VYACLVCGKY+QGRG+ ++ YTH+LE H++
Sbjct: 143 NCPYLGTINRHLLDFDFEKVCSITLSNIHVYACLVCGKYFQGRGKNTYCYTHALEECHYL 202
Query: 164 YINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP 223
++NL +VYC+P+ Y ++D SL+DI+ + + V PLRN FL+
Sbjct: 203 FMNLEDCRVYCIPENYPVDDASLDDIKLICV------------------VVPLRNLFLVF 244
Query: 224 E-NYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEF 282
+ N P++ L RKI++ +NFKG VSPHEF+Q+V + ++IGVQS+PV
Sbjct: 245 DVNKVQPPDPVITTLSQLIRKIFNVKNFKGIVSPHEFVQSVGIVTNGLYKIGVQSDPVSL 304
Query: 283 MSWLLNTLHSDLRNTKKNT------------SIIYECFQGELEVVKEIPKNTISGNDQNT 330
+SWLL +H L N KNT SI+ + F GEL ++K + KN
Sbjct: 305 LSWLLARIHQKLHN--KNTKGSFKTSFHIVESIVTKTFGGEL-LIKTLKKN--------- 352
Query: 331 EKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGET 390
ET R PF ML L +P P+FKD M+ N IPQ +F +L K+DG
Sbjct: 353 -------------RWETERQPFRMLSLTVPEAPIFKDSMDTNAIPQAQIFELLSKYDG-- 397
Query: 391 VTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLP 450
VTE V Y++++LP Y+IL ++RFTKNNFF+EKNPT+V+FP+KNL+LKDY+
Sbjct: 398 VTETVNSSGDVCTYKLSKLPTYLILIIKRFTKNNFFLEKNPTIVSFPMKNLDLKDYV--- 454
Query: 451 TPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+E + ++YDL N+ H+GKP GG ++V V W
Sbjct: 455 -TEEIKDSVTRYDLYCNVCHEGKPTGGIFKVHVYHPPSGNW 494
>gi|315045442|ref|XP_003172096.1| U4/U6.U5 tri-snRNP-associated protein 2 [Arthroderma gypseum CBS
118893]
gi|311342482|gb|EFR01685.1| U4/U6.U5 tri-snRNP-associated protein 2 [Arthroderma gypseum CBS
118893]
Length = 602
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 208/507 (41%), Positives = 280/507 (55%), Gaps = 82/507 (16%)
Query: 23 VEQSSPSPPRLGFENPLLPLANTYDDDDEEEEYGGRG----DSGAKVGQNGR--TGEDDD 76
VE SP+ R + P+ T D E+ + G G D G GE
Sbjct: 14 VEIDSPASKRPKIYSSEEPIDTTTLTDRTEQRWNGNGHDLNDDTPTTDNRGENEAGEIAA 73
Query: 77 EDKDEDEDDLANGYGQGQRSRLVEVRRDCP-------YLDTVNRQVLDFDFEKFCSVSLS 129
E+ D +EDD +R VR++ P YLDT+ R LDFDFEK CSVSLS
Sbjct: 74 EESDLEEDD----------TRHRTVRQNAPLEGYDDLYLDTIQRGALDFDFEKLCSVSLS 123
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
N+NVYACLVCGKYYQGRG KSHAY H+LE HHV+IN+ T+KVY LP+GYE+ + SL+DI
Sbjct: 124 NINVYACLVCGKYYQGRGPKSHAYFHALEVEHHVFINMETKKVYVLPEGYEVKNKSLDDI 183
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
++V G+NNIK D++NV +Q L V P+
Sbjct: 184 KYVVDPHFSKEEVAKLDKTVIDAFDLLGKRYRPGFVGMNNIKSNDYLNVIVQLLAHVRPI 243
Query: 217 RNFFLIPENYRHCKSP-LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGV 275
RNFFL+ ++ +P L RFG L RK+W+ R FK VSPHE LQ V S KRF +
Sbjct: 244 RNFFLL-HDFPALSTPQLPLRFGMLVRKLWNPRAFKAHVSPHELLQEVAIRSSKRFTLTK 302
Query: 276 QSNPVEFMSWLLNTLHSDLRNTK----KNTSIIYECFQGELEV-VKEIPKNTISGNDQNT 330
QS+P+EF+SW LN LH L +K K TS+I F G+L + + I + S N +
Sbjct: 303 QSDPIEFLSWFLNNLHLTLGGSKKPSSKPTSVIQSAFHGKLRIESQAITARSDSANARLV 362
Query: 331 EKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGET 390
S TT + PFLML LDLPP PLF+ + +IIPQVPL +L K++G T
Sbjct: 363 FSESS--------TTTSQVNPFLMLTLDLPPTPLFQSSNKDSIIPQVPLTTLLNKYNGIT 414
Query: 391 VTEVVRPHVARMRYR-VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKN-LELKDYI- 447
+E + R+R+R + LP Y++ H++RF+KN F E+NPT+V FP + L++ Y+
Sbjct: 415 ASEKL---AHRVRHRLLHPLPPYLLFHIKRFSKNKFVAERNPTIVTFPSPHGLDMSPYVE 471
Query: 448 PLPT--PKENEKLRSKYDLIANIVHDG 472
P P+ P + YDL+AN++ D
Sbjct: 472 PDPSIWPPGEPII---YDLVANVILDA 495
>gi|213409724|ref|XP_002175632.1| U4/U6.U5 tri-snRNP-associated protein [Schizosaccharomyces
japonicus yFS275]
gi|212003679|gb|EEB09339.1| U4/U6.U5 tri-snRNP-associated protein [Schizosaccharomyces
japonicus yFS275]
Length = 506
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 177/435 (40%), Positives = 247/435 (56%), Gaps = 70/435 (16%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+NR +LDFDF+K CSVSLSNLNVYACLVCGKYYQGRG S+AY H+L HHV++N
Sbjct: 59 YLDTINRSMLDFDFDKLCSVSLSNLNVYACLVCGKYYQGRGPNSYAYVHALTENHHVFVN 118
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------G 193
T + Y LP+ Y++ +L+DI++V G
Sbjct: 119 CSTLRFYILPESYQVTSAALDDIKYVMQPTYTKEQVSQLDVKETTSYDLDKKPYFPGFIG 178
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-LVHRFGDLTRKIWHARNFKG 252
+NNIK+ D++NV +Q+L V P RN+FL+ + SP +V R L RKIW+ R FK
Sbjct: 179 MNNIKQNDYLNVIVQALAHVKPFRNYFLLTD---FSSSPSIVQRLATLIRKIWNPRAFKN 235
Query: 253 QVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKN------TSIIYE 306
VSP E Q + S K++ + Q +P+EF++WLL+TLH L ++K TSII+
Sbjct: 236 HVSPQELTQEITVLSHKKYSVNEQQDPIEFLTWLLSTLHVALGGSRKKVFSLKPTSIIHY 295
Query: 307 CFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSR------MPFLMLGLDLP 360
FQG I Q + GD +I E R +PFL L LD P
Sbjct: 296 IFQG-----------CIRMESQKIHAQTRAGD---HIVFEADRRIEVNLVPFLYLTLDPP 341
Query: 361 PPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRF 420
P PLF+D E NIIPQV ++ +L K++G T E+ R R+ +T P Y++ H++RF
Sbjct: 342 PKPLFQDEFEGNIIPQVSVYELLTKYNGVTTQELAG---FRRRFHITHAPSYIMFHVKRF 398
Query: 421 TKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHD----GKPEG 476
T+NN+F E NPT+V FP++ L+L YI ++N KL + Y+L NIVH+ G+ E
Sbjct: 399 TRNNYFPEHNPTIVTFPLEGLDLAPYIDKTFLEKNPKLSTIYNLCVNIVHESIFQGENES 458
Query: 477 GFYRVFVQRKSEELW 491
++V V+ K+ W
Sbjct: 459 HVFKVQVKNKATNKW 473
>gi|326482051|gb|EGE06061.1| snRNP assembly factor [Trichophyton equinum CBS 127.97]
Length = 604
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 199/476 (41%), Positives = 270/476 (56%), Gaps = 73/476 (15%)
Query: 49 DDEEEEYGGRGDSGAKVGQNGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCP-- 106
D E+ + G G + + GE + D +E DL + +R VR++ P
Sbjct: 44 DRTEQRWNGNGHNLNEETATDEGGEKETRDTAAEESDL-----EEDDNRHRTVRQNAPLE 98
Query: 107 -----YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGH 161
YLDT+ R LDFDFEK CSVSLSN+NVYACLVCGKYYQGRG KSHAY H+LE H
Sbjct: 99 GYDDLYLDTIQRAALDFDFEKLCSVSLSNINVYACLVCGKYYQGRGPKSHAYFHALEVEH 158
Query: 162 HVYINLRTEKVYCLPDGYEINDPSLEDIRHV----------------------------- 192
HV+IN+ T+KVY LP+GYE+ + SL+DI++V
Sbjct: 159 HVFINMETKKVYVLPEGYEVKNKSLDDIKYVVDPHFSKEEVAKLDKAVIDAFDLSGKRYR 218
Query: 193 ----GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-LVHRFGDLTRKIWHA 247
G+NNIK D++NV +Q L V P+RNFFL+ ++ +P L RFG L RK+W+
Sbjct: 219 PGFVGMNNIKSNDYLNVIVQLLAHVRPIRNFFLL-HDFPALSTPQLPLRFGVLVRKLWNP 277
Query: 248 RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK----KNTSI 303
R FK VSPHE LQ V S KRF + QS+P+EF+SW LN LH L +K K TS+
Sbjct: 278 RAFKAHVSPHELLQEVAIRSSKRFTLTKQSDPIEFLSWFLNNLHLTLGGSKKPSSKPTSV 337
Query: 304 IYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPP 362
I F G+L + + I + S N + S TT + PFLML LDLPP
Sbjct: 338 IQSAFHGKLRIESQAITARSDSANARLVFSESS--------TTTSQVNPFLMLTLDLPPT 389
Query: 363 PLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYR-VTRLPKYMILHMRRFT 421
PLF+ + +IIPQVPL +L K++G T +E + R+R+R + LP Y++ H++RF+
Sbjct: 390 PLFQSSNKDSIIPQVPLTTLLNKYNGITASEKL---AHRVRHRLLHPLPPYLLFHIKRFS 446
Query: 422 KNNFFVEKNPTLVNFPVKN-LELKDYI-PLPT---PKENEKLRSKYDLIANIVHDG 472
KN F E+NPT+V FP + L++ Y+ P P+ P E YDL+AN++ D
Sbjct: 447 KNKFVAERNPTIVTFPSPHGLDMSPYVEPDPSVWPPGEP----ITYDLVANVILDA 498
>gi|443896604|dbj|GAC73948.1| spindle pole body protein - Sad1p [Pseudozyma antarctica T-34]
Length = 637
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 182/451 (40%), Positives = 253/451 (56%), Gaps = 75/451 (16%)
Query: 96 SRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTH 155
+ L + + YLDT+NR VLDFDFEK CSVSLSN+NVYACLVCGKY+QGRG+ S+AY H
Sbjct: 129 TSLAKNSKSALYLDTINRAVLDFDFEKLCSVSLSNINVYACLVCGKYFQGRGRNSYAYLH 188
Query: 156 SLEAGHHVYINLRTEKVYCLPDGYEI---NDPSLEDIRH--------------------- 191
S++ HHV++NL T + Y LPD Y + + +L+DI++
Sbjct: 189 SIDTSHHVFMNLATSQTYILPDNYAVPEESQAALQDIKYLLNPTFDTRTLATLDEKEAYD 248
Query: 192 ----------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLT 241
VGLNN+ + D+VNV +Q+L+ V PLR+FFL + S LV RFG L
Sbjct: 249 LNGTAYSPGFVGLNNVGKNDYVNVVVQALVHVRPLRDFFLRQHEAQAGTSELVARFGALV 308
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRN----- 296
RKIW+ R FK QVSPHEFLQ V + S RF+I Q++PVEF+ WLLN LH+DL +
Sbjct: 309 RKIWNPRAFKPQVSPHEFLQQVAQVSHNRFKITEQADPVEFLGWLLNRLHADLASPGGKG 368
Query: 297 -TKKNTS-----IIYECFQGELEVVK------EIPKNTISGNDQNTEKGSDGGDDHDNI- 343
+K T+ II CFQG ++V E P++ + Q + G +
Sbjct: 369 AKRKRTAVGVETIISRCFQGVVQVESQPLEKVEKPEDDAAVAAQAERLANGAGPTGGQVD 428
Query: 344 -----------TTETSRMPFLMLGLDLP-PPPLF---KDVMEKNIIPQVPLFNILKKFDG 388
E PF +L +DLP PPP+ D +++PQV + +L K+DG
Sbjct: 429 GNGRACFDPAGKVERKDSPFFLLSMDLPTPPPVLGTDGDDESASLVPQVTIGQLLAKYDG 488
Query: 389 ETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFF-VEKNPTLVNFPVKNLELKDYI 447
T + H +Y++ RLP +++LH RRFTKN+ E+NPTLVNFP NL++ Y
Sbjct: 489 ---TSLHASHARLSKYQLRRLPPFLVLHFRRFTKNSLGQTERNPTLVNFPTTNLDVSRYA 545
Query: 448 PLPTPKE----NEKLRSKYDLIANIVHDGKP 474
PL + + + + YDL+AN+V+D P
Sbjct: 546 PLLPAADAMDTDSPIANAYDLVANVVYDATP 576
>gi|378725539|gb|EHY51998.1| ubiquitin thiolesterase [Exophiala dermatitidis NIH/UT8656]
Length = 588
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 202/501 (40%), Positives = 288/501 (57%), Gaps = 74/501 (14%)
Query: 22 VVEQSSPSPPRLGFEN---PLLPLANTYDDDDEEEEYGGRGDSGAKVGQNGRTGEDDDED 78
V+ ++SP+ R+ E+ P+AN + G GD+ A NG T +
Sbjct: 13 VLTEASPASKRVRIEDIPEEAQPVANGSTSE------GQNGDTAA---LNGNTASSTESV 63
Query: 79 KDEDEDDLANGYGQGQRSRLVEVRRDCP-------YLDTVNRQVLDFDFEKFCSVSLSNL 131
D++D +G + + +R++ P YLDT+NR +LDFDFEK CS++LSN+
Sbjct: 64 NQRDDEDETDGEDEDNEVAVAPLRQNAPTEGYSDLYLDTINRSLLDFDFEKLCSITLSNI 123
Query: 132 NVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH 191
NVYACLVCGKY+QGRG KSHAY H+LE HHV+IN+ T+KVY LP+GYE+++ SL+DI++
Sbjct: 124 NVYACLVCGKYFQGRGPKSHAYFHALEVDHHVFINMETKKVYVLPEGYEVHNKSLDDIKY 183
Query: 192 V---------------------------------GLNNIKETDFVNVTIQSLMRVTPLRN 218
V G+NNIK D++NV +Q+L V PLRN
Sbjct: 184 VVDPKFTEEEVKKLDKEPRVSLDLANRKYRPGFIGMNNIKANDYLNVVVQTLAHVAPLRN 243
Query: 219 FFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSN 278
FFL+ + H L RF L RK+W+ + FK VSPHE LQ + S KRF + QS+
Sbjct: 244 FFLL-HAFPHTAPQLPVRFSTLVRKLWNPKAFKSHVSPHELLQEIALRSSKRFTLTQQSD 302
Query: 279 PVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGELEVVKE--IPKNTISGNDQNTEKGS 334
PVEF+SW LN LH L TK +SII + FQG+L V + K+ I+G+ E+ S
Sbjct: 303 PVEFLSWFLNNLHLSLGGSKTKPFSSIIQKAFQGKLRVESQEITAKSDITGDRLRFEESS 362
Query: 335 DGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVME-KNIIPQVPLFNILKKFDGETVTE 393
T T+ P+L+L LDLPP PLF+D +E KNIIPQVPL ++L+K++G E
Sbjct: 363 ---------TINTNITPYLILTLDLPPVPLFRDAVESKNIIPQVPLTSLLQKYNGLNALE 413
Query: 394 VVRPHVARMRYR-VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPV-KNLELKDYIPLPT 451
R+R+R + LP Y++ H++RF+ N F E+NPT+V FP + L++ Y+ P
Sbjct: 414 R---QSHRVRHRLLHPLPPYLLFHIKRFSVNKFVSERNPTIVTFPSPRGLDMSPYVE-PN 469
Query: 452 PKENEKLRS-KYDLIANIVHD 471
P + Y+++ANI+ D
Sbjct: 470 PAVHPPGEPIYYEMVANIILD 490
>gi|300176119|emb|CBK23430.2| unnamed protein product [Blastocystis hominis]
Length = 501
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 168/426 (39%), Positives = 244/426 (57%), Gaps = 62/426 (14%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDTV+R+VLDFD EK CSV+LS+ NVY CLVCG Y QGR + + Y HS++ HH
Sbjct: 14 RSCPYLDTVDRKVLDFDLEKECSVTLSHKNVYVCLVCGVYLQGRAENTPVYFHSMQEDHH 73
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIR-------------------------------- 190
V++N T+K YCLPD YEI D SLEDI+
Sbjct: 74 VFLNTETKKFYCLPDNYEIVDHSLEDIKMALDPEFTPESIKKLDSNTMHYRVPTGDEYLP 133
Query: 191 -HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARN 249
+G+N + D+VNV +Q+L VTP+R+FFLIP NY + +PLVH FG L RK+W
Sbjct: 134 GEMGMNVVDNADYVNVVVQALSHVTPIRDFFLIPANYSYTSNPLVHSFGVLIRKLWSHTR 193
Query: 250 FKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQ 309
FK V+P+EFL V ++S ++F + + + EF+ WLLN+LH+ L++ + T++I CF+
Sbjct: 194 FKCNVTPYEFLNEVTRSSNEKFTVKERRDASEFLCWLLNSLHTALKDKEHKTTVIDRCFK 253
Query: 310 GELEVVKEIPKNT-ISGNDQNTEKGSDGGDDHDNITTETSRMP----------------- 351
G +EV + K ISG +++ TS P
Sbjct: 254 GRIEVTRRTYKLVGISGFQKSSRIPVSAWKWPPTTAACTSTFPRPRISQILAGNEAKVET 313
Query: 352 ------FLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYR 405
+ ML LDLPP PLF++ +++ ++PL+++LKKFDGET T+ + + A YR
Sbjct: 314 AVKQQDYWMLSLDLPPIPLFRNSNNDSVVNKLPLYSLLKKFDGETPTKEIWEN-AEKTYR 372
Query: 406 VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLI 465
+ +LP+Y+I + RF KN FF EKN ++V FP++N+E++ + P ++DL+
Sbjct: 373 IVKLPRYLIFAIHRFQKNEFFFEKNTSIVQFPIRNMEMRHFFFPP----RRAATVEFDLV 428
Query: 466 ANIVHD 471
ANI HD
Sbjct: 429 ANICHD 434
>gi|302501618|ref|XP_003012801.1| hypothetical protein ARB_01052 [Arthroderma benhamiae CBS 112371]
gi|291176361|gb|EFE32161.1| hypothetical protein ARB_01052 [Arthroderma benhamiae CBS 112371]
Length = 604
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 196/478 (41%), Positives = 267/478 (55%), Gaps = 77/478 (16%)
Query: 49 DDEEEEYGGRGDSGAKVGQNGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCP-- 106
D E+ + G G + + GE + D +E DL + +R VR++ P
Sbjct: 44 DRTEQRWNGNGHNLNEETATYEGGEKETRDTTAEESDL-----EEDDNRHRTVRQNAPLE 98
Query: 107 -----YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGH 161
YLDT+ R LDFDFEK CSVSLSN+NVYACLVCGKYYQGRG KSHAY H+LE H
Sbjct: 99 GYDDLYLDTIQRAALDFDFEKLCSVSLSNINVYACLVCGKYYQGRGPKSHAYFHALEVEH 158
Query: 162 HVYINLRTEKVYCLPDGYEINDPSLEDIRHV----------------------------- 192
HV+IN+ T+KVY LP+GYE+ + SL+DI++V
Sbjct: 159 HVFINMETKKVYVLPEGYEVKNKSLDDIKYVVDPHFSKEEVAKLDKTVIDAFDLSGKRYR 218
Query: 193 ----GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-LVHRFGDLTRKIWHA 247
G+NNIK D++NV +Q L V P+RNFFL+ ++ +P L RFG L RK+W+
Sbjct: 219 PGFVGMNNIKSNDYLNVIVQLLAHVRPIRNFFLL-HDFPALSTPQLPLRFGVLVRKLWNP 277
Query: 248 RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK----KNTSI 303
R FK VSPHE LQ V S KRF + QS+P+EF+SW LN LH L +K K TS+
Sbjct: 278 RAFKAHVSPHELLQEVAIRSSKRFTLTKQSDPIEFLSWFLNNLHLTLGGSKKPSSKPTSV 337
Query: 304 IYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDH----DNITTETSRMPFLMLGLDL 359
I F G+L + Q SD + ++ TT + PFLML LDL
Sbjct: 338 IQSAFHGKLRI-----------ESQAITARSDSANARLVFSESSTTTSQVNPFLMLTLDL 386
Query: 360 PPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYR-VTRLPKYMILHMR 418
PP PLF+ + +IIPQVPL +L K++G T +E + R+R+R + LP Y++ H++
Sbjct: 387 PPTPLFQSSNKDSIIPQVPLTTLLNKYNGITASEKL---AHRVRHRLLHPLPPYLLFHIK 443
Query: 419 RFTKNNFFVEKNPTLVNFPVKN-LELKDYI---PLPTPKENEKLRSKYDLIANIVHDG 472
RF+KN F E+NPT+V FP + L++ Y+ P P + YDL+AN++ D
Sbjct: 444 RFSKNKFVAERNPTIVTFPSPHGLDMSPYVEPDPSVCPPGEPII---YDLVANVILDA 498
>gi|326472703|gb|EGD96712.1| snRNP assembly factor [Trichophyton tonsurans CBS 112818]
Length = 604
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 199/476 (41%), Positives = 270/476 (56%), Gaps = 73/476 (15%)
Query: 49 DDEEEEYGGRGDSGAKVGQNGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCP-- 106
D E+ + G G + + GE + D +E DL + +R VR++ P
Sbjct: 44 DRTEQRWNGNGHNLNEETATDEGGEKETRDTAAEESDL-----EEDDNRHRTVRQNAPLE 98
Query: 107 -----YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGH 161
YLDT+ R LDFDFEK CSVSLSN+NVYACLVCGKYYQGRG KSHAY H+LE H
Sbjct: 99 GYDDLYLDTIQRAALDFDFEKLCSVSLSNINVYACLVCGKYYQGRGPKSHAYFHALEVEH 158
Query: 162 HVYINLRTEKVYCLPDGYEINDPSLEDIRHV----------------------------- 192
HV+IN+ T+KVY LP+GYE+ + SL+DI++V
Sbjct: 159 HVFINMETKKVYVLPEGYEVKNKSLDDIKYVVDPHFSKEEVAKLDKAVIDAFDLSGKRYR 218
Query: 193 ----GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-LVHRFGDLTRKIWHA 247
G+NNIK D++NV +Q L V P+RNFFL+ ++ +P L RFG L RK+W+
Sbjct: 219 PGFVGMNNIKSNDYLNVIVQLLAHVRPIRNFFLL-HDFPALSTPQLPLRFGVLVRKLWNP 277
Query: 248 RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK----KNTSI 303
R FK VSPHE LQ V S KRF + QS+P+EF+SW LN LH L +K K TS+
Sbjct: 278 RAFKAHVSPHELLQEVAIRSSKRFTLTKQSDPIEFLSWFLNNLHLTLGGSKKPSSKPTSV 337
Query: 304 IYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPP 362
I F G+L + + I + S N + S TT + PFLML LDLPP
Sbjct: 338 IQSAFHGKLRIESQAITARSDSANARLVFSESS--------TTTSQVNPFLMLTLDLPPT 389
Query: 363 PLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYR-VTRLPKYMILHMRRFT 421
PLF+ + +IIPQVPL +L K++G T +E + R+R+R + LP Y++ H++RF+
Sbjct: 390 PLFQSSNKDSIIPQVPLTTLLNKYNGITASEKL---AHRVRHRLLHPLPPYLLFHIKRFS 446
Query: 422 KNNFFVEKNPTLVNFPVKN-LELKDYI-PLPT---PKENEKLRSKYDLIANIVHDG 472
KN F E+NPT+V FP + L++ Y+ P P+ P E YDL+AN++ D
Sbjct: 447 KNKFVAERNPTIVTFPSPHGLDMSPYVEPDPSVWPPGEP----IIYDLVANVILDA 498
>gi|242808710|ref|XP_002485221.1| snRNP assembly factor, putative [Talaromyces stipitatus ATCC 10500]
gi|218715846|gb|EED15268.1| snRNP assembly factor, putative [Talaromyces stipitatus ATCC 10500]
Length = 616
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 192/443 (43%), Positives = 262/443 (59%), Gaps = 66/443 (14%)
Query: 77 EDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYAC 136
E + D+DD ++S+ VE D YLDT+NR VLDFDFEK CSVSLSN+NVYAC
Sbjct: 71 ESPEADDDDETLLAAPQRQSQPVEGYGDL-YLDTINRAVLDFDFEKLCSVSLSNINVYAC 129
Query: 137 LVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV---- 192
LVCGKY+QGRG KS+AY H+LE GHHV++N+ T+KVY LP+GYE+ SL+DI++V
Sbjct: 130 LVCGKYFQGRGNKSYAYFHALEIGHHVFVNMETKKVYVLPEGYEVKSKSLDDIKYVVDPT 189
Query: 193 -----------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIP 223
G+NNIK D++NV +Q L VTP+RNFFL+
Sbjct: 190 FTKNDVLKLDKEVRDAWDLQGKKYRPGYVGMNNIKANDYLNVVVQVLAHVTPIRNFFLL- 248
Query: 224 ENYRHCKSP-LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEF 282
+N+ SP L RF L RK+W+ + FK VSPHE LQ + S KRF + QS+PVEF
Sbjct: 249 QNFPVPGSPQLSVRFSTLVRKLWNPKAFKSHVSPHELLQEIALRSSKRFTLTHQSDPVEF 308
Query: 283 MSWLLNTLHSDLRNTKK----NTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGD 338
+SW LN LH L +KK TS+I + FQG L + Q SD +
Sbjct: 309 LSWFLNNLHLSLGGSKKPSKTPTSVIQQAFQGHLRI-----------ESQAITAHSDTTN 357
Query: 339 DH----DNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEV 394
++ T T PFL+L LDLPP PLF+ ++IIPQVPL +L K++G T +E
Sbjct: 358 SRLVFTESSQTNTQTSPFLILTLDLPPTPLFQSANRESIIPQVPLTTLLNKYNGITASEK 417
Query: 395 VRPHVARMRYR-VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPV-KNLELKDYIPLPTP 452
+ R+R+R + LP Y++ H++RF+KN F E+NPT+V FP ++L++ Y+ P P
Sbjct: 418 LS---HRVRHRLLHPLPPYLLFHIKRFSKNKFVSERNPTIVTFPSPRSLDMSPYVE-PNP 473
Query: 453 K---ENEKLRSKYDLIANIVHDG 472
+ E + YDL++NI+ D
Sbjct: 474 ELWPPGEPI--IYDLVSNIILDA 494
>gi|121706833|ref|XP_001271643.1| snRNP assembly factor, putative [Aspergillus clavatus NRRL 1]
gi|119399791|gb|EAW10217.1| snRNP assembly factor, putative [Aspergillus clavatus NRRL 1]
Length = 614
Score = 323 bits (829), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 194/445 (43%), Positives = 260/445 (58%), Gaps = 67/445 (15%)
Query: 74 DDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNV 133
D E D D+D A + Q S +E D YLDT+NRQ+LDFDFEK CS++LSN+NV
Sbjct: 80 DVAESSDVDDDRPAIAAPKRQ-SEPMEGYSDL-YLDTINRQILDFDFEKQCSITLSNINV 137
Query: 134 YACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV- 192
YACLVCGKY+QGRG KSHAY H+LE GHHV+IN+ T+KVY LP+GYE+ + SLEDI++V
Sbjct: 138 YACLVCGKYFQGRGPKSHAYFHALEVGHHVFINMSTKKVYVLPEGYEVKNKSLEDIKYVV 197
Query: 193 --------------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFF 220
G+NNIK D++NV +Q L V P+RN+F
Sbjct: 198 DPHYTKEEVSKLDKQVQDAFDLAGNRYRPGFVGMNNIKANDYLNVVVQLLAHVFPVRNYF 257
Query: 221 LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPV 280
L+ E L RF L RK+W+ + F+ VSPHE LQ + S KRF + QS+PV
Sbjct: 258 LLHEFPTPGTPQLALRFSTLVRKLWNPKAFRSHVSPHELLQEIALRSSKRFTLTQQSDPV 317
Query: 281 EFMSWLLNTLHSDLRNTKK----NTSIIYECFQGELEVVKEIPKNTISGNDQN-----TE 331
EF+SW LN LH L +KK TS+I+ FQG L + E T + QN TE
Sbjct: 318 EFLSWFLNNLHLSLGGSKKPTATPTSVIHAAFQGHLRI--ESQAITAHSDTQNARLVFTE 375
Query: 332 KGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETV 391
G T + + PFL+L LDLPP PLF+ ++IIPQVPL +L K++G T
Sbjct: 376 SG----------TINSQKTPFLILTLDLPPTPLFQSANRESIIPQVPLTTLLNKYNGITA 425
Query: 392 TEVVRPHVARMRYR-VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPV-KNLELKDYI-- 447
+E + R+R+R + LP Y++ H++RF+KN F E+NPT+V FP ++L++ Y+
Sbjct: 426 SEKL---AHRVRHRLLHPLPPYLLFHIKRFSKNRFVSERNPTIVTFPSPRSLDMSPYVEP 482
Query: 448 -PLPTPKENEKLRSKYDLIANIVHD 471
P P L YDL+ANI+ D
Sbjct: 483 NPDIWPPGEPIL---YDLVANIILD 504
>gi|440635643|gb|ELR05562.1| hypothetical protein GMDG_07482 [Geomyces destructans 20631-21]
Length = 536
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 187/436 (42%), Positives = 256/436 (58%), Gaps = 75/436 (17%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R VLDFDFEK CSV+LSN+NVYACLVCG+YYQGRG KSHAY HSL+ HHVYIN
Sbjct: 90 YLDTIDRHVLDFDFEKLCSVTLSNINVYACLVCGRYYQGRGPKSHAYFHSLDVDHHVYIN 149
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------G 193
++T+K+Y LP+GYE+ + SL+DI+ V G
Sbjct: 150 MQTQKIYVLPEGYEVKNKSLDDIKFVSDPRYTKQEVMGLDHAPKEAWALNGKQYTPGFVG 209
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIK+ D+ NV IQ+L V PLRN+F++ + K L R L RKIW+ R FK
Sbjct: 210 MNNIKDNDYFNVVIQALSHVPPLRNYFMLDDF--STKPELAKRLSILVRKIWNPRAFKAH 267
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGE 311
VSPHE LQ V S K+F + Q++PV+F+SW LN LH L TK +SI+ + FQG+
Sbjct: 268 VSPHELLQEVSLRSNKKFSLTQQADPVDFLSWFLNNLHVALGGSKTKPGSSIMQQIFQGK 327
Query: 312 LEVVKEIPKNTISGNDQNTEKGSDGGD-----DHDNITTETSRMPFLMLGLDLPPPPLFK 366
L++ Q +D GD + + + SR FL L LDLP PLF+
Sbjct: 328 LKI-----------ESQAITAKADAGDRLRFEEAAEVKADVSR--FLFLTLDLPAAPLFQ 374
Query: 367 DVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYR-VTRLPKYMILHMRRFTKNNF 425
D +E+NIIPQVPL +IL K+DG E + R RYR + LP Y++ H++RF++N F
Sbjct: 375 DELERNIIPQVPLTSILSKYDGLKAQEQLN---HRRRYRLLHPLPPYLLFHIKRFSQNKF 431
Query: 426 FVEKNPTLVNFPVKNLELKDYIPLPTPK---ENEKLRSKYDLIANIVH----------DG 472
E+NPT+V F +NL + Y+ P PK E + YDL+AN++H +G
Sbjct: 432 VSERNPTIVTFDARNLNMGPYVE-PNPKYAPPGEPIW--YDLVANVIHEAVRGREDSVEG 488
Query: 473 KPEGGFYRVFVQRKSE 488
+ E ++V ++RK +
Sbjct: 489 EAERRAWKVQLRRKED 504
>gi|327304351|ref|XP_003236867.1| snRNP assembly factor [Trichophyton rubrum CBS 118892]
gi|326459865|gb|EGD85318.1| snRNP assembly factor [Trichophyton rubrum CBS 118892]
Length = 605
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 206/513 (40%), Positives = 283/513 (55%), Gaps = 74/513 (14%)
Query: 13 EDRHVKSVKVVEQSSPSPPRLGFENPLLPLANTYD-DDDEEEEYGGRGDSGAKVGQNGRT 71
EDR + V++ +S P E P +T D E+ + G G + +
Sbjct: 8 EDRLDEPVQIDSPASKRPKIYSTEEPTDATTHTRSLTDRTEQRWNGNGHNLNEETATDEG 67
Query: 72 GEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCP-------YLDTVNRQVLDFDFEKFC 124
G+ + D ++ DL + SR VR++ P YLDT+ R LDFDFEK C
Sbjct: 68 GKKETRDASAEDSDL-----EEYDSRHPTVRQNAPLEGYDDLYLDTIQRAALDFDFEKLC 122
Query: 125 SVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDP 184
SVSLSN+NVYACLVCGKYYQGRG KSHAY H+LE HHV+IN+ T+KVY LP+GYE+ +
Sbjct: 123 SVSLSNINVYACLVCGKYYQGRGPKSHAYFHALEVEHHVFINMETKKVYVLPEGYEVKNK 182
Query: 185 SLEDIRHV---------------------------------GLNNIKETDFVNVTIQSLM 211
SL+DI++V G+NNIK D++NV +Q L
Sbjct: 183 SLDDIKYVVDPHFSKEEVAKLDKTVIDAFDLSGKRYRPGFVGMNNIKSNDYLNVIVQLLA 242
Query: 212 RVTPLRNFFLIPENYRHCKSP-LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKR 270
V P+RNFFL+ ++ +P L RFG L RK+W+ R FK VSPHE LQ V S KR
Sbjct: 243 HVRPIRNFFLL-HDFPALSTPQLPLRFGVLVRKLWNPRAFKAHVSPHELLQEVAIRSSKR 301
Query: 271 FRIGVQSNPVEFMSWLLNTLHSDLRNTK----KNTSIIYECFQGELEV-VKEIPKNTISG 325
F + QS+P+EF+SW LN LH L +K K TS+I F G+L + + I + S
Sbjct: 302 FTLTKQSDPIEFLSWFLNNLHLTLGGSKKPSSKPTSVIQSAFHGKLRIESQAITARSDSA 361
Query: 326 NDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKK 385
N + S TT + PFLML LDLPP PLF+ + +IIPQV L +L K
Sbjct: 362 NARLVFSESS--------TTTSQVNPFLMLTLDLPPTPLFQSSNKDSIIPQVALTTLLNK 413
Query: 386 FDGETVTEVVRPHVARMRYR-VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKN-LEL 443
++G T +E + R+R+R + LP Y++ H++RF+KN F E+NPT+V FP + L++
Sbjct: 414 YNGITASEKL---AHRVRHRLLHPLPPYLLFHIKRFSKNKFVAERNPTIVTFPSPHGLDM 470
Query: 444 KDYI-PLPT---PKENEKLRSKYDLIANIVHDG 472
Y+ P P+ P E YDL+AN++ D
Sbjct: 471 SPYVEPDPSVWPPGEP----IIYDLVANVILDA 499
>gi|402085602|gb|EJT80500.1| U4/U6.U5 tri-snRNP-associated protein 2 [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 599
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 184/426 (43%), Positives = 243/426 (57%), Gaps = 77/426 (18%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R VLDFDFEK CSVSLSN+NVYACLVCG+YYQGRG +SHAY H+L+ HHV+IN
Sbjct: 123 YLDTIDRNVLDFDFEKLCSVSLSNINVYACLVCGRYYQGRGPRSHAYFHALDDDHHVFIN 182
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------- 192
++T+KVY LP+GYE+ SL+DI++V
Sbjct: 183 MQTQKVYVLPEGYEVLSSSLDDIKYVSDPRYTRAEVAALDRRRAAPAWTLAGREYAPGFV 242
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------------NYRHCKSPLVHRFG 238
G+NNIKE D+VNV +Q+L V PLRNF L+ + N + LV R
Sbjct: 243 GMNNIKENDYVNVVVQALAHVPPLRNFLLLEDLGGGGGGGGGGGNNNNSSQTAELVRRCS 302
Query: 239 DLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RN 296
L RKIW+ R FK VSPHE LQ V S KRF + QS+PV+F+SW LN LH L
Sbjct: 303 TLMRKIWNPRAFKAHVSPHELLQEVSLLSNKRFTLTAQSDPVDFLSWFLNNLHLGLGGSR 362
Query: 297 TKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDD---HDNITTETSRMPFL 353
T+ +S++ FQG ++V Q +D D D + PFL
Sbjct: 363 TRPGSSMVQRVFQGRVKV-----------ESQAITAKADAFDRLRFEDAAEVKVDVGPFL 411
Query: 354 MLGLDLPPPPLFK---DVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTR-L 409
+L LDLPP PLF+ D E++IIPQVPL +IL K+DG + E + R RYR+ L
Sbjct: 412 LLTLDLPPAPLFQGGGDDEERSIIPQVPLTSILAKYDGVSAQEHLN---HRRRYRLMHPL 468
Query: 410 PKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYI---PLPTPKENEKLRSKYDLIA 466
P Y+ILH++RF++N F E+NPT+V F + L++ Y+ P P L YDL+A
Sbjct: 469 PPYLILHVKRFSRNKFVSERNPTIVTFDPRGLDVAPYVEPDPALHPPGEPVL---YDLVA 525
Query: 467 NIVHDG 472
N+VH+
Sbjct: 526 NVVHEA 531
>gi|296805165|ref|XP_002843407.1| ubiquitin C-terminal hydrolase Ubp10 [Arthroderma otae CBS 113480]
gi|238844709|gb|EEQ34371.1| ubiquitin C-terminal hydrolase Ubp10 [Arthroderma otae CBS 113480]
Length = 604
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 196/479 (40%), Positives = 269/479 (56%), Gaps = 79/479 (16%)
Query: 49 DDEEEEYGGRGDSGAKVGQNGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCP-- 106
D E+ + G G SG V E + ED D D + + +R +R++ P
Sbjct: 44 DRTEQRWDGNGQSGNGVSATAEQVEKEAEDTTADASDW-----EEEENRHQTIRQNAPLE 98
Query: 107 -----YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGH 161
YLDT+ R LDFDFEK CSVSLSN+NVYACLVCGKYYQGRG KSHAY H+LE H
Sbjct: 99 GYDDLYLDTIQRAALDFDFEKLCSVSLSNINVYACLVCGKYYQGRGPKSHAYFHALEVEH 158
Query: 162 HVYINLRTEKVYCLPDGYEINDPSLEDIRHV----------------------------- 192
HV+IN+ T+KVY LP+GYE+ + SL+DI++V
Sbjct: 159 HVFINMETKKVYVLPEGYEVKNKSLDDIKYVVDPHFSKEEVAKLDKAVIDAFDLSGKRYR 218
Query: 193 ----GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-LVHRFGDLTRKIWHA 247
G+NNIK D++NV +Q L V P+RNFFL+ ++ +P L RFG L RK+W+
Sbjct: 219 PGFVGMNNIKSNDYLNVVVQLLAHVRPIRNFFLL-HDFPALNTPQLPLRFGMLVRKLWNP 277
Query: 248 RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL----RNTKKNTSI 303
R FK VSPHE LQ V S KRF + QS+P+EF+SW LN LH L + + K +S+
Sbjct: 278 RAFKAHVSPHELLQEVAIRSSKRFTLTKQSDPIEFLSWFLNNLHLTLGGSKKQSSKPSSV 337
Query: 304 IYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDH----DNITTETSRMPFLMLGLDL 359
I F G+L + Q SD + ++ TT + PFL+L LDL
Sbjct: 338 IQSAFHGKLRI-----------ESQAITARSDSANARLVFSESSTTTSQINPFLILTLDL 386
Query: 360 PPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYR-VTRLPKYMILHMR 418
PP PLF+ + +IIPQVPL +L K++G T +E + R+R+R + LP Y++ H++
Sbjct: 387 PPTPLFQSSNKDSIIPQVPLTTLLNKYNGITASEKL---AHRVRHRLLHPLPPYLLFHIK 443
Query: 419 RFTKNNFFVEKNPTLVNFPVKN-LELKDYI-PLPT---PKENEKLRSKYDLIANIVHDG 472
RF+KN F E+NPT+V FP + L++ Y+ P P+ P E YDL+AN++ D
Sbjct: 444 RFSKNKFVAERNPTIVTFPSPHGLDMSPYVEPDPSILPPGE----PIIYDLVANVILDA 498
>gi|258566686|ref|XP_002584087.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237905533|gb|EEP79934.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 607
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 184/411 (44%), Positives = 252/411 (61%), Gaps = 61/411 (14%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+ R LDFDFEK CSV+LSN+NVYACLVCGKY+QGRG KSHAY HSLE GHHV++N
Sbjct: 100 YLDTIQRSNLDFDFEKLCSVTLSNINVYACLVCGKYFQGRGPKSHAYFHSLEIGHHVFVN 159
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------G 193
+ T++VY LP+GYE+ + SL+DI++V G
Sbjct: 160 METKRVYVLPEGYEVKNKSLDDIKYVVDPTYTKEEVARLDTVVIEAWDLAGRKYRPGYVG 219
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-LVHRFGDLTRKIWHARNFKG 252
+NNIK D++NV +Q L V P+RNFFL+ +++ +P L RFG L RK+W+ + FK
Sbjct: 220 MNNIKSNDYLNVIVQLLAHVRPIRNFFLL-HHFQIPGTPQLPLRFGTLVRKLWNPKAFKC 278
Query: 253 QVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK----NTSIIYECF 308
VSPHE LQ + S KRF + QS+PVEF+SW LN LH L +KK TS+I+ F
Sbjct: 279 HVSPHELLQEIALRSSKRFTLTHQSDPVEFLSWFLNNLHLSLGGSKKPSPTPTSVIHSAF 338
Query: 309 QGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKD 367
QG L + + I + S N + S TT + +MPFL+L LDLPP PLF+
Sbjct: 339 QGHLRIESQAITARSDSANARLVFSESS--------TTTSQKMPFLILTLDLPPTPLFQS 390
Query: 368 VMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYR-VTRLPKYMILHMRRFTKNNFF 426
+++IIPQVPL N+L K++G T E + R+R+R + LP Y++ H++RF+KN F
Sbjct: 391 ADKESIIPQVPLINLLNKYNGVTAIEKLS---HRVRHRLLHPLPPYLLFHIKRFSKNKFV 447
Query: 427 VEKNPTLVNFPV-KNLELKDYI-PLPT---PKENEKLRSKYDLIANIVHDG 472
E+NPT+V FP + L++ Y+ P P+ P E YDL+AN++ D
Sbjct: 448 AERNPTIVTFPSPRGLDMSPYVEPNPSVWPPGEP----IIYDLVANVILDA 494
>gi|452980130|gb|EME79891.1| hypothetical protein MYCFIDRAFT_37991 [Pseudocercospora fijiensis
CIRAD86]
Length = 545
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 182/452 (40%), Positives = 262/452 (57%), Gaps = 67/452 (14%)
Query: 68 NGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCP-------YLDTVNRQVLDFDF 120
NGR D+ D + +D++ G + R++ P YLDT++R LDFDF
Sbjct: 48 NGRANGDNG---DHNAEDVSEEEGDDDGADDAPSRQNAPALGYSDLYLDTISRTRLDFDF 104
Query: 121 EKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYE 180
EK CS++LSN+NVYACLVCGKY+ GRG K+ AY H+LE GHHVY+N++T+KVY LP+GYE
Sbjct: 105 EKLCSITLSNINVYACLVCGKYFTGRGAKTPAYFHALEDGHHVYVNMQTKKVYVLPEGYE 164
Query: 181 INDPSLEDIRHV---------------------------------GLNNIKETDFVNVTI 207
+ + SL+DI+ V GLNNIK D++NV +
Sbjct: 165 VKNKSLDDIKFVVDPTFTPEEVKTLDKEPKPQWDLLGRKYIPGFVGLNNIKANDYLNVVV 224
Query: 208 QSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKAS 267
Q+L V PLRNF ++ + KS L+ RF + RKIW+ + FK VSPHE +Q V S
Sbjct: 225 QALSHVVPLRNFLMLED--LSLKSELIKRFSIMVRKIWNPKAFKSHVSPHELIQEVSLRS 282
Query: 268 KKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGELEVVKEIPKNTISG 325
K+F + Q++P++F+SW LN LH L TK +S+I + FQG L V
Sbjct: 283 GKKFLLTQQADPIDFLSWFLNNLHLALGGSKTKPKSSLIQKIFQGSLRV----------- 331
Query: 326 NDQNTEKGSDGGD--DHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNIL 383
Q +D GD ++ ++ + PF++L LDLPP PLF+D +EKNIIPQV L +L
Sbjct: 332 ESQEITARADAGDRLRFEDTAIKSQQSPFMILTLDLPPAPLFQDDVEKNIIPQVSLTTVL 391
Query: 384 KKFDGETVTEVVRPHVARMRYRVTR-LPKYMILHMRRFTKNNFF-VEKNPTLVNFPVKNL 441
+K++G T E + RMRYR+ LP ++I+H++RF N F ++NPT+V F + L
Sbjct: 392 QKYNGITAQERMN---TRMRYRLLHPLPPFLIMHVKRFQPNKFLGSQRNPTIVTFNPRTL 448
Query: 442 ELKDYIPLPTPKENEKLRS-KYDLIANIVHDG 472
++ Y+ P PK + Y+L+ANI ++G
Sbjct: 449 DVSPYVE-PDPKIHPIGEPIVYELVANITYEG 479
>gi|302662702|ref|XP_003023002.1| hypothetical protein TRV_02823 [Trichophyton verrucosum HKI 0517]
gi|291186978|gb|EFE42384.1| hypothetical protein TRV_02823 [Trichophyton verrucosum HKI 0517]
Length = 604
Score = 320 bits (821), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 206/513 (40%), Positives = 283/513 (55%), Gaps = 74/513 (14%)
Query: 13 EDRHVKSVKVVEQSSPSPPRLGFENPLLPLANTYD-DDDEEEEYGGRGDSGAKVGQNGRT 71
ED + V++ +S P E P A+ D E+ + G G + +
Sbjct: 7 EDSLDEPVQIDSPASKRPKIYSTEEPTDATAHARSLTDRTEQRWNGNGHNLNEETATYEG 66
Query: 72 GEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCP-------YLDTVNRQVLDFDFEKFC 124
GE + D +E DL + +R VR+ P YLDT+ R LDFDFEK C
Sbjct: 67 GEKETRDTTAEESDL-----EEDDNRHRTVRQSAPLEGYDDLYLDTIQRAALDFDFEKLC 121
Query: 125 SVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDP 184
SVSLSN+NVYACLVCGKYYQGRG KSHAY H+LE HHV+IN+ T+KVY LP+GYE+ +
Sbjct: 122 SVSLSNINVYACLVCGKYYQGRGPKSHAYFHALEVEHHVFINMETKKVYVLPEGYEVKNK 181
Query: 185 SLEDIRHV---------------------------------GLNNIKETDFVNVTIQSLM 211
SL+DI++V G+NNIK D++NV +Q L
Sbjct: 182 SLDDIKYVVDPHFSKEEVAKLDKTVIDAFDLSGKRYRPGFVGMNNIKSNDYLNVIVQLLA 241
Query: 212 RVTPLRNFFLIPENYRHCKSP-LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKR 270
V P+RNFFL+ ++ +P L RFG L RK+W+ R FK VSPHE LQ V S KR
Sbjct: 242 HVRPIRNFFLL-HDFPALSTPQLPLRFGVLVRKLWNPRAFKAHVSPHELLQEVAIRSSKR 300
Query: 271 FRIGVQSNPVEFMSWLLNTLHSDLRNTK----KNTSIIYECFQGELEV-VKEIPKNTISG 325
F + QS+P+EF+SW LN LH L +K K TS+I F G+L + + I + S
Sbjct: 301 FTLTKQSDPIEFLSWFLNNLHLTLGGSKKPSSKPTSVIQSAFHGKLRIESQAITARSDSA 360
Query: 326 NDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKK 385
N + S T++ +R FLML LDLPP PLF+ + +IIPQVPL +L K
Sbjct: 361 NARLVFSES------STTTSQVNR--FLMLTLDLPPTPLFQSSNKDSIIPQVPLTTLLNK 412
Query: 386 FDGETVTEVVRPHVARMRYR-VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKN-LEL 443
++G T +E + R+R+R + LP Y++ H++RF+KN F E+NPT+V FP + L++
Sbjct: 413 YNGITASEKL---AHRVRHRLLHPLPPYLLFHIKRFSKNKFVAERNPTIVTFPSPHGLDM 469
Query: 444 KDYI-PLPT---PKENEKLRSKYDLIANIVHDG 472
Y+ P P+ P E YDL+AN++ D
Sbjct: 470 SPYVEPDPSVWPPGEP----IIYDLVANVILDA 498
>gi|90075992|dbj|BAE87676.1| unnamed protein product [Macaca fascicularis]
Length = 485
Score = 320 bits (821), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 184/433 (42%), Positives = 250/433 (57%), Gaps = 71/433 (16%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREVDEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLK------------------ 171
Query: 190 RHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTR 242
F+ +P+NY++ K P LV RFG+L R
Sbjct: 172 -----------------------------FYCLPDNYKNIKRPPGDIMFLLVQRFGELMR 202
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNT 301
K+W+ RNFK VSPHE LQAV+ SKK F+I Q + V+F+SW LN LHS L KK
Sbjct: 203 KLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKK 262
Query: 302 SIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLP 360
+I+ + FQG + + K++P + ++ + D++ E++ F+ L LDLP
Sbjct: 263 TIVTDVFQGSMRIFTKKLPHPDLPAEEKEQLLHN---DEYQETMVEST---FMYLTLDLP 316
Query: 361 PPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE--VVRPHVARMRYRVTRLPKYMILHMR 418
PL+KD E+ IIPQVPLFNIL KF+G T E + + + R+++T+LP Y+I ++
Sbjct: 317 TAPLYKDEKEQLIIPQVPLFNILAKFNGITEKEYKTYKENFLK-RFQLTKLPPYLIFCIK 375
Query: 419 RFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGF 478
RFTKNNFFVEKNPT+VNFP+ N++L++Y+ ++ + YDLIANIVHDGKP G
Sbjct: 376 RFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQAVHKN--TTYDLIANIVHDGKPSEGS 433
Query: 479 YRVFVQRKSEELW 491
YR+ V W
Sbjct: 434 YRIHVLHHGTGKW 446
>gi|154279092|ref|XP_001540359.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150412302|gb|EDN07689.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 616
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 185/439 (42%), Positives = 256/439 (58%), Gaps = 61/439 (13%)
Query: 74 DDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNV 133
D DE++ +E ++ +++ E D YLDT+ R VLDFDFEK CSVSLSN+NV
Sbjct: 81 DSDEEEAGEESAIS---APARQTAPAEGYSDL-YLDTIQRSVLDFDFEKQCSVSLSNINV 136
Query: 134 YACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH-- 191
YACLVCGKYYQGRG KSHAY H+L+ GHHV++N+ T+KVY LP+GYE+ SL+DI++
Sbjct: 137 YACLVCGKYYQGRGPKSHAYFHALDVGHHVFVNMETKKVYVLPEGYEVKSRSLDDIKYVV 196
Query: 192 -------------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY 226
VG+NNIK D++NV +Q L V P+RNFFL+ +
Sbjct: 197 DPQYKKEEVAKLDKAVIDAWDLAGFVGMNNIKSNDYLNVIVQVLSHVRPIRNFFLLHQFP 256
Query: 227 RHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWL 286
L RFG L RK+W+ R FK VSPHE LQ V S KRF + QS+PV+F+SW
Sbjct: 257 MPGTPQLPLRFGILVRKLWNPRAFKSHVSPHELLQEVALRSSKRFTLTQQSDPVDFLSWF 316
Query: 287 LNTLHSDLRNTKK----NTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDH-- 340
LN LH L +KK TS+I+ FQG L + Q SD +
Sbjct: 317 LNNLHLSLGGSKKPSPTPTSVIHSAFQGHLRI-----------ESQAITARSDAANARLV 365
Query: 341 --DNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPH 398
++ T + PFL+L LDLPP PLF+ ++IIPQ+PL +L K++G +E +
Sbjct: 366 FSESSETTSQTTPFLILTLDLPPTPLFQSTNAESIIPQIPLTTLLNKYNGLVASEKLS-- 423
Query: 399 VARMRYR-VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPV-KNLELKDYIPLPTP---K 453
R+R+R + LP Y++ H++RF+KN F E+NPT+V FP ++L++ Y+ P P
Sbjct: 424 -HRVRHRLLHPLPPYLLFHIKRFSKNKFVSERNPTIVTFPSPRSLDMSPYVE-PNPSVCS 481
Query: 454 ENEKLRSKYDLIANIVHDG 472
E + YDL+AN++ D
Sbjct: 482 AGEPIL--YDLVANVILDA 498
>gi|71004356|ref|XP_756844.1| hypothetical protein UM00697.1 [Ustilago maydis 521]
gi|46095544|gb|EAK80777.1| hypothetical protein UM00697.1 [Ustilago maydis 521]
Length = 633
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 186/464 (40%), Positives = 255/464 (54%), Gaps = 92/464 (19%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+NR VLDFDFEK CSVSLSN+NVYACLVCG+Y+QGRG+ S+AY HS++ HHV++N
Sbjct: 141 YLDTINRAVLDFDFEKLCSVSLSNINVYACLVCGRYFQGRGRNSYAYLHSIDDSHHVFMN 200
Query: 167 LRTEKVYCLPDGYEI---NDPSLEDIRH-------------------------------V 192
L T + Y LPD Y + N +L DI++ V
Sbjct: 201 LATAQTYILPDNYAVPEENQAALHDIKYLLNPTFTPKTIHAIEARPAYDLNGDQYYPGFV 260
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIP---ENYRHCKSPLVHRFGDLTRKIWHARN 249
GLNN+ + D+VN IQ+L+ V +R++FL+ E KS LV RFG L RK+W+ R
Sbjct: 261 GLNNVGKNDYVNAVIQALVHVPMIRDYFLLGKEVEGEVGEKSELVKRFGSLVRKVWNPRA 320
Query: 250 FKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKN--------- 300
FK QVSPHEFLQ V S RFRI QS+PVEF+ WLLN LH+DL KN
Sbjct: 321 FKAQVSPHEFLQQVAVVSGNRFRITHQSDPVEFLGWLLNCLHADLTRGGKNGGKRKRGVG 380
Query: 301 ---TSIIYECFQGELEVVKE------------------------IPKNTISGNDQNTEKG 333
S+I CFQG ++V + + + TISG +Q E G
Sbjct: 381 AGGESVISRCFQGVVQVESQPLSRSDETEAASSASTVAAEAEGMLKEATISG-EQVDESG 439
Query: 334 SDGGDDHDNITTETSRMPFLMLGLDLPPP-PLFKDVMEKNIIPQVPLFNILKKFDGETVT 392
D ++ + PF +L +DLPPP P+ +N++PQ+ + +L ++DG+++
Sbjct: 440 RARFD--PSVPVDRRDSPFFLLAMDLPPPAPVISSEEGENLVPQITIGQVLSRYDGQSLH 497
Query: 393 EVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFV-EKNPTLVNFPVKNLELKDYIP--- 448
+ RY + RLP Y+I+H RRFTKN+ E+NPTLVNFP+K L++ ++
Sbjct: 498 A---SNAKLTRYTLRRLPPYLIIHFRRFTKNSLGQEERNPTLVNFPIKGLDVTKHVALCR 554
Query: 449 -----LPTPKENEKLRSKYDLIANIVHDGKPEGGF-YRVFVQRK 486
L +P + KL YDL+AN V P G Y + QR+
Sbjct: 555 DTQQQLSSPDADSKLSEIYDLVANCVK--APAGSVRYTLRAQRR 596
>gi|328859895|gb|EGG09003.1| hypothetical protein MELLADRAFT_84272 [Melampsora larici-populina
98AG31]
Length = 698
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 184/461 (39%), Positives = 255/461 (55%), Gaps = 95/461 (20%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+NR +LDFDFE+ CSV+LSN+N+YACLVCGKY+QGR + S AY HS+ + HHV+IN
Sbjct: 188 YLDTINRDMLDFDFERLCSVTLSNINIYACLVCGKYFQGRSKISPAYAHSIGSDHHVFIN 247
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRH----------------------------------V 192
L +EKVY LPDGYE++DPSL+DI++ V
Sbjct: 248 LLSEKVYVLPDGYEVSDPSLDDIKYLLNPTFTPEFLNRLDTGLYPVAYDLQGISYLPGFV 307
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP------LVHRFGDLTRKIWH 246
GLNNIK D++NV +Q L VTPLR++ + C+ P LV RFG L RK+W+
Sbjct: 308 GLNNIKANDYLNVIVQILSHVTPLRDYLI-------CRKPTSNDTELVKRFGTLMRKLWN 360
Query: 247 ARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL------------ 294
+ FK QVSPHEF Q V K S ++F++ Q++P+EF+ WLLNTLH DL
Sbjct: 361 PKAFKSQVSPHEFGQEVSKRSNRKFKLTEQADPLEFLGWLLNTLHLDLGGHQKKPMKKKH 420
Query: 295 --------------------RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGS 334
+ +SII F+GE+ I ++ I EKG
Sbjct: 421 MKLKNEGNPQESDQMIKKVEEEKDEPSSIIDAAFRGEV----RIEEHDILARPDTGEKGL 476
Query: 335 DGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEV 394
D T + PFL L +DLPPPP+F+D +EKNIIPQ+ L +L K+DG+ E+
Sbjct: 477 KPIFDL-GAEVRTIQTPFLFLTIDLPPPPVFQDTIEKNIIPQIGLNEVLMKYDGKKTIEI 535
Query: 395 VRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKE 454
+ R+++ LP ++ILH +RFT NNF EKNPT+VNF K ++L Y ++
Sbjct: 536 ---NGKLKRFKILGLPPFLILHFKRFTSNNFIEEKNPTIVNFHTKGIDLSPYYEPKPKEK 592
Query: 455 ----NEKLRSKYDLIANIVHDGKP----EGGFYRVFVQRKS 487
+E + YDL+AN+ + E ++V V +S
Sbjct: 593 EKEVDEPIERLYDLLANVTYSSTAGTAKEDSQWKVQVHTRS 633
>gi|399216416|emb|CCF73104.1| unnamed protein product [Babesia microti strain RI]
Length = 461
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 184/463 (39%), Positives = 258/463 (55%), Gaps = 76/463 (16%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVR------RDCPYLDTVNRQVLDFDFEKF 123
+ G DD D+ Y + +R+ LV R RDCPYL T+NR VLDFDFEK
Sbjct: 3 KRGSDDAHTSITVSDE----YRKTKRADLVTKRYESTKRRDCPYLGTINRHVLDFDFEKI 58
Query: 124 CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEIND 183
CSVSLS N+YACLVCGKYYQGRG ++ H+LE GH++YINL+ +VYCLP+ Y + D
Sbjct: 59 CSVSLSTNNIYACLVCGKYYQGRGPNTYCNIHALEEGHYLYINLKDSQVYCLPENYLVQD 118
Query: 184 PSLEDIRH---------------------------------VGLNNIKETDFVNVTIQSL 210
SL DI++ +GLNN+ +TD NV IQ L
Sbjct: 119 NSLNDIKYFLNPTYTNEDVEEKSTKAIYGKALDGTDFIPGVIGLNNLNKTDCFNVIIQIL 178
Query: 211 MRVTPLRNFFLIPENYRHCK-SPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
V PLR+ L + + K +V +L RKI++ NFKG VSPHEFLQ++ ASK
Sbjct: 179 CCVKPLRDKMLTFDTGKLSKPDRVVETLSELIRKIYNPNNFKGIVSPHEFLQSIGLASKG 238
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQN 329
++RIG QS+P F+ WL +HS L+ N+SI+ +CFQGEL + + +
Sbjct: 239 KYRIGNQSDPAVFLQWLFVWIHSKLKRKGTNSSIVTDCFQGELFITEHV----------- 287
Query: 330 TEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE 389
GD+ E + PF +L L++P +F D N I Q+P++++ KFDG
Sbjct: 288 -------GDE-----MEQKKTPFKLLTLEIPQMSVFNDA---NAISQIPIYDLFYKFDGN 332
Query: 390 TVTEVVRPHVARM-RYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIP 448
T E V + Y + RLP+Y+I+ ++RF KNNFFVEKN T+V FP+K+L + +
Sbjct: 333 TPNET---EVGKFCTYSIWRLPEYLIIIVKRFYKNNFFVEKNSTIVTFPLKSLNMSSCLH 389
Query: 449 LPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+ N +KY+L+A+I H G+PE G Y+V+V + W
Sbjct: 390 PDAVQLNP--LTKYNLVASITHVGQPENGSYKVYVCHQPTGDW 430
>gi|453081855|gb|EMF09903.1| U4/U6.U5 tri-snRNP-associated protein 2 [Mycosphaerella populorum
SO2202]
Length = 547
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 176/408 (43%), Positives = 245/408 (60%), Gaps = 61/408 (14%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+ R LDFDFEK CS++LSN+NVYACLVCGKY+ GRG K+ AY H+LE GHHVYIN
Sbjct: 93 YLDTIARSRLDFDFEKLCSITLSNINVYACLVCGKYFSGRGAKTPAYFHALEEGHHVYIN 152
Query: 167 LRTEKVYCLPDGYEINDPSLEDIR---------------------------------HVG 193
+ T+KVY LP+GYE+ + SL+DI+ VG
Sbjct: 153 METKKVYVLPEGYEVKNKSLDDIKVVVDPRFTLEEVKAMDREPKPQWDLLGRKYIPGFVG 212
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
LNNIK D++NV +Q+L VTPLRNF ++ + + LV RF L RK+W+ + FK
Sbjct: 213 LNNIKANDYLNVVVQALSHVTPLRNFLMLED--LSSRPELVKRFSVLVRKMWNPKAFKKH 270
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGE 311
VSPHE +Q + S K+F + Q++PV+F+SW LN LH L TK +SII + FQG
Sbjct: 271 VSPHELIQNISLQSGKKFSLTEQADPVDFLSWFLNNLHLALGGSKTKPKSSIIQKIFQGA 330
Query: 312 LEVVKEIPKNTISGNDQNTEKGSDGGD----DHDNITTETSRMPFLMLGLDLPPPPLFKD 367
L+V Q +D GD + I ++ SR +++L LDLP PLF+D
Sbjct: 331 LKV-----------ESQEISARADAGDRLRFEDTAIKSQQSR--YMILTLDLPAAPLFQD 377
Query: 368 VMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTR-LPKYMILHMRRFTKNNFF 426
+EKNIIPQVPL +L+K++G E + R+RYR+ LP Y+I+H++RF N F
Sbjct: 378 DVEKNIIPQVPLTTVLQKYNGIVAQERMN---TRVRYRLLHPLPPYLIMHVKRFQPNKFL 434
Query: 427 -VEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRS-KYDLIANIVHDG 472
++NPT+V F ++L++ Y+ P PK++ YDLIAN+ ++G
Sbjct: 435 QSQRNPTIVTFNPRSLDMGPYVE-PDPKQHPMGEPIVYDLIANVTYEG 481
>gi|70994592|ref|XP_752073.1| snRNP assembly factor [Aspergillus fumigatus Af293]
gi|66849707|gb|EAL90035.1| snRNP assembly factor, putative [Aspergillus fumigatus Af293]
gi|159125012|gb|EDP50129.1| snRNP assembly factor, putative [Aspergillus fumigatus A1163]
Length = 614
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 181/412 (43%), Positives = 246/412 (59%), Gaps = 65/412 (15%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+NR++LDFDFEK CSVSLSN+NVYACLVCGKY+QGRG +S+AY H+LE GHHV+IN
Sbjct: 111 YLDTINREILDFDFEKLCSVSLSNINVYACLVCGKYFQGRGPRSYAYFHALEVGHHVFIN 170
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------G 193
+ T+KVY LP+GYE+ SLEDI++V G
Sbjct: 171 ISTKKVYVLPEGYEVKSKSLEDIKYVVDPHYSKEEVSKLDKEVHDAFDLAGNRYRPGFVG 230
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIK D++NV +Q L V P+RN+FL+ + L RF L RK+W+ + F+
Sbjct: 231 MNNIKANDYLNVVVQVLAHVLPIRNYFLLHQFPVPGTPELALRFSTLVRKLWNPKAFRSH 290
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK----NTSIIYECFQ 309
VSPHE LQ + S KRF + QS+PVEF+SW LN LH L +KK TS+I FQ
Sbjct: 291 VSPHELLQEIALRSSKRFTLTQQSDPVEFLSWFLNNLHLSLGGSKKPSSTPTSVIQAAFQ 350
Query: 310 GELEVVKEIPKNTISGNDQN-----TEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPL 364
G L + E T + QN TE G T + +PFL+L LDLPP PL
Sbjct: 351 GHLRI--ESQAITAHSDTQNARLVFTESG----------TINSQTIPFLILTLDLPPTPL 398
Query: 365 FKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYR-VTRLPKYMILHMRRFTKN 423
F+ ++IIP VPL +L K++G T +E + R+R+R + LP Y++ H++RF+KN
Sbjct: 399 FQSANRESIIPHVPLTTLLNKYNGITASEKL---AHRVRHRLLHPLPPYLLFHIKRFSKN 455
Query: 424 NFFVEKNPTLVNFPV-KNLELKDYIPLPTPK---ENEKLRSKYDLIANIVHD 471
F E+NPT+V FP ++L++ Y+ P P+ E + YDL+ANI+ D
Sbjct: 456 RFVSERNPTIVTFPSPRSLDMSPYVE-PNPEIWPPGEPIL--YDLVANIILD 504
>gi|328869581|gb|EGG17958.1| SAP DNA-binding domain-containing protein [Dictyostelium
fasciculatum]
Length = 524
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 172/412 (41%), Positives = 247/412 (59%), Gaps = 48/412 (11%)
Query: 101 VRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAG 160
RRDCPYLDTVNR VLDFDF+K CS+S+ NVYACLVCGK +QGRG+ SHA+ H L++
Sbjct: 88 ARRDCPYLDTVNRGVLDFDFDKVCSISMVKHNVYACLVCGKNFQGRGEGSHAHYHCLQSN 147
Query: 161 HHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFF 220
HHV+ NL T+K YCLP+ YEI DPSL+DIR++ +N + ++ ++ + L
Sbjct: 148 HHVFANLHTQKFYCLPEDYEIIDPSLDDIRYL-INPTFTKEQISKMDSNIKQSRSLDGGL 206
Query: 221 LIPENYRHC-------------------KSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQ 261
P+ + S LV F +L R++W+ RNFK QVSPHE +Q
Sbjct: 207 YYPDPLQQIENRNNQNNNQNNVHISFSKSSALVSTFSELLRRMWNPRNFKSQVSPHELIQ 266
Query: 262 AVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNT-------------------- 301
AV+KASKKRF IGV+S+P++ + WLLN+L++D+ K T
Sbjct: 267 AVIKASKKRFSIGVESDPLDLLQWLLNSLNNDIIEQKNITGNSSSSSSSSSSSSSSSSSS 326
Query: 302 SIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPP 361
+II FQG +EV K+ + Q E+ D ++ T +PF L LDLP
Sbjct: 327 TIITNTFQGMVEVTT---KSLLKAPTQQEEQ--DNITNNQEFKTTKQIIPFFTLALDLPS 381
Query: 362 PPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFT 421
+FK+ +K+ IPQ+PL+ +L K+DG TE + P+ R+R+ +LP Y++ ++RF+
Sbjct: 382 RSIFKEDRDKSFIPQIPLYELLNKYDGS--TEKIFPNGDIKRFRLLKLPSYLVFSIKRFS 439
Query: 422 KNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKL-RSKYDLIANIVHDG 472
+NNFF EK T+VNFP+KNLE+KD+I N+ + + KY+L+A I H+G
Sbjct: 440 QNNFFTEKESTIVNFPLKNLEMKDFISRDNQSINDDVEKYKYNLMAMIKHEG 491
>gi|119501032|ref|XP_001267273.1| snRNP assembly factor, putative [Neosartorya fischeri NRRL 181]
gi|119415438|gb|EAW25376.1| snRNP assembly factor, putative [Neosartorya fischeri NRRL 181]
Length = 614
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 190/444 (42%), Positives = 262/444 (59%), Gaps = 69/444 (15%)
Query: 75 DDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVY 134
+ D DED +A ++S +E D YLDT+NR++LDFDFEK CSVSLSN+NVY
Sbjct: 83 ESSDVDEDRPVIA---APKRQSEPMEGYSDL-YLDTINREILDFDFEKLCSVSLSNINVY 138
Query: 135 ACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV-- 192
ACLVCGKY+QGRG KS+AY H+LE GHHV+IN+ T+KVY LP+GYE+ SL+DI++V
Sbjct: 139 ACLVCGKYFQGRGPKSYAYFHALEVGHHVFINISTKKVYVLPEGYEVKSKSLDDIKYVVD 198
Query: 193 -------------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFL 221
G+NNIK D++NV +Q L V P+RN+FL
Sbjct: 199 PHYSKEEVSKLDKEVHDAFDLAGNRYRPGFVGMNNIKANDYLNVVVQVLAHVFPIRNYFL 258
Query: 222 IPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVE 281
+ + L RF L RK+W+ + F+ VSPHE LQ + S KRF + QS+PVE
Sbjct: 259 LHQFPVPGTPELALRFSTLVRKLWNPKAFRSHVSPHELLQEIALRSSKRFTLTQQSDPVE 318
Query: 282 FMSWLLNTLHSDLRNTKK----NTSIIYECFQGELEVVKEIPKNTISGNDQN-----TEK 332
F+SW LN LH L +KK TS+I FQG L + E T + QN TE
Sbjct: 319 FLSWFLNNLHLSLGGSKKPSSTPTSVIQAAFQGHLRI--ESQAITAHSDTQNARLVFTES 376
Query: 333 GSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVT 392
G+ I ++T+ PFL+L LDLPP PLF+ ++IIP VPL +L K++G T +
Sbjct: 377 GT--------INSQTT--PFLILTLDLPPTPLFQSANRESIIPHVPLTTLLNKYNGITAS 426
Query: 393 EVVRPHVARMRYR-VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPV-KNLELKDYIPLP 450
E + R+R+R + LP Y++ H++RF+KN F E+NPT+V FP ++L++ Y+ P
Sbjct: 427 EKL---AHRVRHRLLHPLPPYLLFHIKRFSKNRFVSERNPTIVTFPSPRSLDMSPYVE-P 482
Query: 451 TPK---ENEKLRSKYDLIANIVHD 471
P+ E + YDL+ANI+ D
Sbjct: 483 NPEIWPPGEPIL--YDLVANIILD 504
>gi|391869251|gb|EIT78453.1| spindle pole body protein - Sad1p [Aspergillus oryzae 3.042]
Length = 616
Score = 317 bits (812), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 208/525 (39%), Positives = 286/525 (54%), Gaps = 74/525 (14%)
Query: 1 MTKKRKNNGSADEDR-----HVKSVKVVEQSSPSPPRLGFENPLLPLANTYDDDDEEEEY 55
M KR+ + +ED +K +V + PR G LPL + EE+E
Sbjct: 1 MMSKRQAELALEEDTVAGSPAIKKARVEDDIEEGDPRHG----ALPLRRASGQEREEDER 56
Query: 56 GGRGDSGAKVGQNGRTGEDDDEDKDEDEDDLANG------YGQGQRSRLVEVRRDCPYLD 109
G D A Q G E+ D + D ++S +E D YLD
Sbjct: 57 KG-NDILAAADQEGEELEEAAVDNGAESDFDDADDDRPVIAAPKRQSAPMEGYSDL-YLD 114
Query: 110 TVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRT 169
T+NR +LDFDFEK CSV+LSN+NVYACLVCGKY+QGRG KSHAY H LE GHHV+IN+ T
Sbjct: 115 TINRGILDFDFEKLCSVTLSNINVYACLVCGKYFQGRGPKSHAYFHGLEVGHHVFINMGT 174
Query: 170 EKVYCLPDGYEINDPSLEDIRHV---------------------------------GLNN 196
+KVY LP+GYE+ + SL+DI++V G+NN
Sbjct: 175 KKVYVLPEGYEVKNKSLDDIKYVVDPHYSKEEVSKLDKEVHDAFDLAGNRYRPGFVGMNN 234
Query: 197 IKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSP 256
IK D++NV +Q L V P+RN+FL+ E L RF L RK+W+ + F+ VSP
Sbjct: 235 IKANDYLNVVVQLLAHVFPIRNYFLLHEFPTPGTPQLALRFSTLVRKLWNPKAFRSHVSP 294
Query: 257 HEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK----NTSIIYECFQGEL 312
HE LQ + S KRF + QS+PVEF+SW LN LH L +KK TS++ FQG L
Sbjct: 295 HELLQEIALRSSKRFTLTQQSDPVEFLSWFLNNLHLSLGGSKKPSKTPTSVVQAAFQGHL 354
Query: 313 EVVKEIPKNTISGNDQNTE-KGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEK 371
+ E T + QN ++ GD I ++T+ PFL+L LDLPP PLF+ +
Sbjct: 355 RI--ESQAITAHSDTQNARLVFTESGD----IKSQTT--PFLILTLDLPPTPLFQSANRE 406
Query: 372 NIIPQVPLFNILKKFDGETVTEVVRPHVARMRYR-VTRLPKYMILHMRRFTKNNFFVEKN 430
+IIP VPL +L K++G T +E + R+R+R + LP Y++ H++RF+KN F E+N
Sbjct: 407 SIIPHVPLTTLLNKYNGITASEKL---AHRVRHRLLHPLPPYLLFHIKRFSKNRFVSERN 463
Query: 431 PTLVNFPV-KNLELKDYI---PLPTPKENEKLRSKYDLIANIVHD 471
PT+V FP ++L++ Y+ P P L YDL+ANI+ D
Sbjct: 464 PTIVTFPSPRSLDMSPYVEPNPDIWPPGEPIL---YDLVANIILD 505
>gi|239611636|gb|EEQ88623.1| snRNP assembly factor [Ajellomyces dermatitidis ER-3]
gi|327348352|gb|EGE77209.1| SnRNP assembly factor [Ajellomyces dermatitidis ATCC 18188]
Length = 615
Score = 317 bits (812), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 179/412 (43%), Positives = 243/412 (58%), Gaps = 63/412 (15%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+ R VLDFDFEK CSVSLSN+NVYACLVCGKYYQGRG KSHAY H+L+ GHHV++N
Sbjct: 108 YLDTIQRSVLDFDFEKQCSVSLSNINVYACLVCGKYYQGRGPKSHAYFHALDVGHHVFVN 167
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------G 193
+ T+KVY LP+GYE+ SL+DI++V G
Sbjct: 168 METKKVYVLPEGYEVKSRSLDDIKYVVDPQYKKEEVAKLDKVVIDAWDLAGKRYRPGYVG 227
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIK D++NV +Q L V P+RNFFL+ + L RFG L RK+W+ R F+
Sbjct: 228 MNNIKSNDYLNVIVQVLAHVRPIRNFFLLHQFPTPGTPQLPLRFGILVRKLWNPRAFRSH 287
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK----KNTSIIYECFQ 309
VSPHE LQ V S KRF + QS+PV+F+SW LN LH L +K K TS+I+ FQ
Sbjct: 288 VSPHELLQEVALRSSKRFTLTQQSDPVDFLSWFLNNLHLTLGGSKKPSPKPTSVIHSAFQ 347
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDH----DNITTETSRMPFLMLGLDLPPPPLF 365
G+L + Q SD + +++ T + PFL+L LDLPP PLF
Sbjct: 348 GQLRI-----------ESQAITARSDAANARLVFSESMETTSQTTPFLILTLDLPPTPLF 396
Query: 366 KDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYR-VTRLPKYMILHMRRFTKNN 424
+ ++IIPQVPL +L K++G +E + R+R+R + LP Y++ H++RF+KN
Sbjct: 397 QSTNTESIIPQVPLTTLLNKYNGLVASEKLS---HRVRHRLLHPLPPYLLFHIKRFSKNK 453
Query: 425 FFVEKNPTLVNFPV-KNLELKDYI---PLPTPKENEKLRSKYDLIANIVHDG 472
F E+NPT+V FP ++L++ Y+ P P L YDL+AN++ D
Sbjct: 454 FVSERNPTIVTFPSPRSLDMSPYVEPNPDLYPAGEPIL---YDLVANVILDA 502
>gi|294940392|ref|XP_002782775.1| pre-mRNA-splicing factor SAD1, putative [Perkinsus marinus ATCC
50983]
gi|239894725|gb|EER14570.1| pre-mRNA-splicing factor SAD1, putative [Perkinsus marinus ATCC
50983]
Length = 505
Score = 317 bits (812), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 187/429 (43%), Positives = 244/429 (56%), Gaps = 68/429 (15%)
Query: 101 VRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAG 160
+ + CPYL TVNR +LDFDFEK CSV+LSN NVYACLVCGKYY GRGQ + AYTH+LE
Sbjct: 33 MEKKCPYLGTVNRNMLDFDFEKVCSVTLSNENVYACLVCGKYYTGRGQGTCAYTHALEKD 92
Query: 161 HHVYINLRTEKVYCLPDGYEINDPSLEDIRH----------------------------- 191
H+V+INL+ +VYC+PDGYE+ D SL+DIR+
Sbjct: 93 HYVFINLKNTRVYCIPDGYEVIDASLDDIRYNLNPTFTRDMLNSTIDKSTAIGFTLDGRP 152
Query: 192 -----VGLNNIKE-TDFVNVTIQSLMRVTPLRNFFLIP-ENYRHCKSPLVHRFGDLTRKI 244
VGLN I TD++NV +Q L +V PLRN L ++ ++ + +L RK
Sbjct: 153 FLPGCVGLNTISGGTDYLNVIVQILQQVVPLRNSLLTKKQDLDASRTDITEALAELFRKT 212
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSII 304
++A+NFKG VSPHEFLQ V SKK F Q +P EF++WLLN L + I
Sbjct: 213 YNAKNFKGVVSPHEFLQVVSIKSKKHF-FTSQRDPAEFLTWLLNHL--------RPHKTI 263
Query: 305 YECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPL 364
+ F+GE+ V T D T GD + T+E FL L LDLP PL
Sbjct: 264 NKIFKGEILV------KTCRNLDSQT-----AGDVWEETTSE-----FLTLTLDLPDAPL 307
Query: 365 FKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNN 424
FKD E IPQVP+ ++L KF+GET+ E + H +Y + RLP Y+I +RF KNN
Sbjct: 308 FKDTQE--FIPQVPMISLLDKFNGETIVEDLV-HRQLRKYTLKRLPPYLIFVTKRFKKNN 364
Query: 425 FFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGF--YRVF 482
F VEKNPTLV FP+K L++KD++ NE +KYDL+ + H G+PE G Y+ +
Sbjct: 365 FTVEKNPTLVRFPLKGLDMKDWVHPSWHNINE--HTKYDLVGLVSHSGQPEAGMGVYKAY 422
Query: 483 VQRKSEELW 491
V W
Sbjct: 423 VLHSRTNQW 431
>gi|317146151|ref|XP_001821327.2| snRNP assembly factor [Aspergillus oryzae RIB40]
Length = 615
Score = 317 bits (812), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 203/504 (40%), Positives = 279/504 (55%), Gaps = 69/504 (13%)
Query: 17 VKSVKVVEQSSPSPPRLGFENPLLPLANTYDDDDEEEEYGGRGDSGAKVGQNGRTGEDDD 76
+K +V + PR G LPL + EE+E G D A Q G E+
Sbjct: 21 IKKARVEDDIEEGDPRHG----ALPLRRASGQEREEDERKG-NDILAAADQEGEELEEAA 75
Query: 77 EDKDEDEDDLANG------YGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSN 130
D + D ++S +E D YLDT+NR++LDFDFEK CSV+LSN
Sbjct: 76 VDNGAESDFDDADDDRPVIAAPKRQSAPMEGYSDL-YLDTINREILDFDFEKLCSVTLSN 134
Query: 131 LNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIR 190
+NVYACLVCGKY+QGRG KSHAY H LE GHHV+IN+ T+KVY LP+GYE+ + SL+DI+
Sbjct: 135 INVYACLVCGKYFQGRGPKSHAYFHGLEVGHHVFINMGTKKVYVLPEGYEVKNKSLDDIK 194
Query: 191 HV---------------------------------GLNNIKETDFVNVTIQSLMRVTPLR 217
+V G+NNIK D++NV +Q L V P+R
Sbjct: 195 YVVDPHYSKEEVSKLDKEVHDAFDLAGNRYRPGFVGMNNIKANDYLNVVVQLLAHVFPIR 254
Query: 218 NFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQS 277
N+FL+ E L RF L RK+W+ + F+ VSPHE LQ + S KRF + QS
Sbjct: 255 NYFLLHEFPTPGTPQLALRFSTLVRKLWNPKAFRSHVSPHELLQEIALRSSKRFTLTQQS 314
Query: 278 NPVEFMSWLLNTLHSDLRNTKK----NTSIIYECFQGELEVVKEIPKNTISGNDQNTE-K 332
+PVEF+SW LN LH L +KK TS++ FQG L + E T + QN
Sbjct: 315 DPVEFLSWFLNNLHLSLGGSKKPSKTPTSVVQAAFQGHLRI--ESQAITAHSDTQNARLV 372
Query: 333 GSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVT 392
++ GD I ++T+ PFL+L LDLPP PLF+ ++IIP VPL +L K++G T +
Sbjct: 373 FTESGD----IKSQTT--PFLILTLDLPPTPLFQSANRESIIPHVPLTTLLNKYNGITAS 426
Query: 393 EVVRPHVARMRYR-VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPV-KNLELKDYI--- 447
E + R+R+R + LP Y++ H++RF+KN F E+NPT+V FP ++L++ Y+
Sbjct: 427 EKL---AHRVRHRLLHPLPPYLLFHIKRFSKNRFVSERNPTIVTFPSPRSLDMSPYVEPN 483
Query: 448 PLPTPKENEKLRSKYDLIANIVHD 471
P P L YDL+ANI+ D
Sbjct: 484 PDIWPPGEPIL---YDLVANIILD 504
>gi|261201494|ref|XP_002627147.1| snRNP assembly factor [Ajellomyces dermatitidis SLH14081]
gi|239592206|gb|EEQ74787.1| snRNP assembly factor [Ajellomyces dermatitidis SLH14081]
Length = 615
Score = 317 bits (812), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 179/412 (43%), Positives = 243/412 (58%), Gaps = 63/412 (15%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+ R VLDFDFEK CSVSLSN+NVYACLVCGKYYQGRG KSHAY H+L+ GHHV++N
Sbjct: 108 YLDTIQRSVLDFDFEKQCSVSLSNINVYACLVCGKYYQGRGPKSHAYFHALDVGHHVFVN 167
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------G 193
+ T+KVY LP+GYE+ SL+DI++V G
Sbjct: 168 METKKVYVLPEGYEVKSRSLDDIKYVVDPQYKKEEVAKLDKVVIDAWDLAGKRYRPGYVG 227
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIK D++NV +Q L V P+RNFFL+ + L RFG L RK+W+ R F+
Sbjct: 228 MNNIKSNDYLNVIVQVLAHVRPIRNFFLLHQFPTPGTPQLPLRFGILVRKLWNPRAFRSH 287
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK----KNTSIIYECFQ 309
VSPHE LQ V S KRF + QS+PV+F+SW LN LH L +K K TS+I+ FQ
Sbjct: 288 VSPHELLQEVALRSSKRFTLTQQSDPVDFLSWFLNNLHLTLGGSKKPSPKPTSVIHSAFQ 347
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDH----DNITTETSRMPFLMLGLDLPPPPLF 365
G+L + Q SD + +++ T + PFL+L LDLPP PLF
Sbjct: 348 GQLRI-----------ESQAITARSDAANARLVFSESMETTSQTTPFLILTLDLPPTPLF 396
Query: 366 KDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYR-VTRLPKYMILHMRRFTKNN 424
+ ++IIPQVPL +L K++G +E + R+R+R + LP Y++ H++RF+KN
Sbjct: 397 QSTNTESIIPQVPLTTLLNKYNGLVASEKLS---HRVRHRLLHPLPPYLLFHIKRFSKNK 453
Query: 425 FFVEKNPTLVNFPV-KNLELKDYI---PLPTPKENEKLRSKYDLIANIVHDG 472
F E+NPT+V FP ++L++ Y+ P P L YDL+AN++ D
Sbjct: 454 FVSERNPTIVTFPSPRSLDMSPYVEPNPDLYPAGEPIL---YDLVANVILDA 502
>gi|388855294|emb|CCF51188.1| related to SAD1-protein required for assembly of U4 snRNA into the
U4/U6 particle [Ustilago hordei]
Length = 643
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 189/479 (39%), Positives = 266/479 (55%), Gaps = 97/479 (20%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+NR VLDFDFEK CSVSLSN+NVYACLVCG+Y+QGRG+ S+AY HS++ HHV++N
Sbjct: 136 YLDTINRAVLDFDFEKLCSVSLSNINVYACLVCGRYFQGRGRNSYAYLHSIDDSHHVFMN 195
Query: 167 LRTEKVYCLPDGYEI---NDPSLEDIRH-------------------------------- 191
L + + Y LPD Y + N +L+DI++
Sbjct: 196 LASAQTYILPDNYAVLEENQAALQDIKYLLNPTFTPQLIREVDEKQAYYELKGEKYWPGF 255
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCK---SPLVHRFGDLTRKIWHAR 248
+GLNN+ + D+VN +Q+L+ V +R++FL + + K S LV RFG L RK+W+ R
Sbjct: 256 IGLNNVGKNDYVNAVVQALVHVPVVRDYFLEEKERKDGKGERSELVKRFGALVRKMWNPR 315
Query: 249 NFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK--------- 299
FK QVSPHEFLQ V + S RF+I QS+PVEF+ WLLN LH+DL +
Sbjct: 316 AFKPQVSPHEFLQQVAQVSGNRFKITHQSDPVEFLGWLLNRLHADLTSAPAVAAGKPAKR 375
Query: 300 ------NTSIIYECFQGELEVVKE---------IPKNTISGNDQNTEK---GSDGGDDHD 341
SII CFQG ++V + P +T + ++ ++ SDG D +
Sbjct: 376 KRVGPGGESIISRCFQGTVQVESQPLTRPAEDAYPTSTSAQAERILDQPLTTSDGQIDSE 435
Query: 342 -------NITTETSRMPFLMLGLDLPPPP--LFKDVME--KNIIPQVPLFNILKKFDGET 390
++T PF +L +DLP PP L +D E ++PQV + +L K+DG++
Sbjct: 436 GRAQFDPSLTLNKRDTPFFLLAMDLPTPPPVLAQDDSETGSRLVPQVTIGQVLAKYDGKS 495
Query: 391 VTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFV-EKNPTLVNFPVKNLELKDYIP- 448
+ E H RY + RLP Y+I+H RRFTKN+ E+NPTLVNFP+K+L++ ++P
Sbjct: 496 LHE---SHGKLTRYHLRRLPPYLIIHFRRFTKNSLGQEERNPTLVNFPIKSLDVGKHVPL 552
Query: 449 LPTPKEN--------EKLRSKYDLIANIVHDGKP----EGGFYRVFVQRKS----EELW 491
LP N KL YDL+AN+V+D P +G ++ V S EE W
Sbjct: 553 LPNLTSNGAKKDESDRKLNEVYDLVANVVYDAVPGTVRQGASWKTQVHTNSKPPKEEKW 611
>gi|325092320|gb|EGC45630.1| proteasome component [Ajellomyces capsulatus H88]
Length = 805
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 184/445 (41%), Positives = 256/445 (57%), Gaps = 67/445 (15%)
Query: 74 DDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNV 133
D DE++ +E ++ +++ E D YLDT+ R VLDFDFEK CS+SLSN+NV
Sbjct: 264 DSDEEEAGEESAIS---APARQTAPAEGYSDL-YLDTIQRSVLDFDFEKQCSISLSNINV 319
Query: 134 YACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV- 192
YACLVCGKYYQGRG KSHAY H+L+ GHHV++N+ T+KVY LP+GYE+ SL+DI++V
Sbjct: 320 YACLVCGKYYQGRGPKSHAYFHALDVGHHVFVNMETKKVYVLPEGYEVKSRSLDDIKYVV 379
Query: 193 --------------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFF 220
G+NNIK D++NV +Q L V P+RNFF
Sbjct: 380 DPQYKKEEVAKLDKAVTDAWDLAGKRYRPGFVGMNNIKSNDYLNVIVQVLSHVRPIRNFF 439
Query: 221 LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPV 280
L+ + L RFG L RK+W+ R FK VSPHE LQ V S KRF + QS+PV
Sbjct: 440 LLHQFPMPGTPQLPLRFGILVRKLWNPRAFKSHVSPHELLQEVALRSSKRFTLTQQSDPV 499
Query: 281 EFMSWLLNTLHSDLRNTKK----NTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDG 336
+F+SW LN LH L +KK TS+I+ FQG L + Q SD
Sbjct: 500 DFLSWFLNNLHLSLGGSKKPSPTPTSVIHSAFQGHLRI-----------ESQAITARSDA 548
Query: 337 GDDH----DNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVT 392
+ ++ T + PFL+L LDLPP PLF+ ++IIPQ+PL +L K++G +
Sbjct: 549 ANARLVFSESSETTSQTTPFLILTLDLPPTPLFQSTNAESIIPQIPLTTLLNKYNGLVAS 608
Query: 393 EVVRPHVARMRYR-VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPV-KNLELKDYIPLP 450
E + R+R+R + LP Y++ H++RF+KN F E+NPT+V FP ++L++ Y+ P
Sbjct: 609 EKLS---HRVRHRLLHPLPPYLLFHIKRFSKNKFVSERNPTIVTFPSPRSLDMSPYVE-P 664
Query: 451 TP---KENEKLRSKYDLIANIVHDG 472
P E + YDL+AN++ D
Sbjct: 665 NPSVCSAGEPIL--YDLVANVILDA 687
>gi|452837730|gb|EME39672.1| hypothetical protein DOTSEDRAFT_75352 [Dothistroma septosporum
NZE10]
Length = 543
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 178/426 (41%), Positives = 252/426 (59%), Gaps = 62/426 (14%)
Query: 89 GYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQ 148
G G ++ E D YLDT++R LDFDFEK CSV+LSN+NVYACLVCGKY+ GRG
Sbjct: 71 GIGSLRQKEATEGYSDL-YLDTISRTRLDFDFEKLCSVTLSNINVYACLVCGKYFSGRGP 129
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIR------------------ 190
K+ AY H+LE HHV+IN+ T+KVY LP+GYE+ + SL+DI+
Sbjct: 130 KTPAYFHALEENHHVFINMETKKVYVLPEGYEVKNNSLDDIKVVVDPRFSQEEIKALDKE 189
Query: 191 ---------------HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVH 235
VGLNNIK D++NV +Q+L V PLR+F ++ + + LV
Sbjct: 190 PTPQWDLLGRRYIPGFVGLNNIKANDYLNVVVQALSHVRPLRDFLMLED--LSSRPELVK 247
Query: 236 RFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL- 294
RF + RKIW+ ++FK VSPHE +Q + S K+F + Q++PV+F+SW LN LH L
Sbjct: 248 RFSVMVRKIWNPKSFKSHVSPHELIQEIALRSNKKFLLTEQADPVDFLSWFLNNLHLALG 307
Query: 295 -RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGD----DHDNITTETSR 349
TK +S++ + FQG L V Q +D GD + +I ++TS
Sbjct: 308 GSKTKPRSSLVQKIFQGSLRV-----------ESQAISARADAGDRLRFEDADIKSQTS- 355
Query: 350 MPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTR- 408
PF++L LDLPP PLF+D +EKNIIPQVPL +L+K++G T E + R+RYR+
Sbjct: 356 -PFMILTLDLPPAPLFQDDVEKNIIPQVPLTTVLQKYNGITGQERMN---TRVRYRLQHP 411
Query: 409 LPKYMILHMRRFTKNNFF-VEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRS-KYDLIA 466
LP Y+++H++RF N F ++NPT+V F + L++ Y+ P PK + YDL+A
Sbjct: 412 LPPYLVMHVKRFQPNKFLQSQRNPTIVTFNPRALDMSPYVQ-PDPKLHATGEPIIYDLVA 470
Query: 467 NIVHDG 472
NI ++G
Sbjct: 471 NITYEG 476
>gi|225562344|gb|EEH10623.1| proteasome component C11 [Ajellomyces capsulatus G186AR]
Length = 805
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 185/445 (41%), Positives = 256/445 (57%), Gaps = 67/445 (15%)
Query: 74 DDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNV 133
D DE++ +E ++ +++ E D YLDT+ R VLDFDFEK CSVSLSN+NV
Sbjct: 264 DSDEEEAGEESAIS---APARQTAPAEGYSDL-YLDTIQRSVLDFDFEKQCSVSLSNINV 319
Query: 134 YACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV- 192
YACLVCGKYYQGRG KSHAY H+L+ GHHV++N+ T+KVY LP+GYE+ SL+DI++V
Sbjct: 320 YACLVCGKYYQGRGPKSHAYFHALDVGHHVFVNMETKKVYVLPEGYEVKSRSLDDIKYVV 379
Query: 193 --------------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFF 220
G+NNIK D++NV +Q L V P+RNFF
Sbjct: 380 DPQYKKEEVAKLDKAVIDAWDLAGKRYRPGFVGMNNIKSNDYLNVIVQVLSHVRPIRNFF 439
Query: 221 LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPV 280
L+ + L RFG L RK+W+ R FK VSPHE LQ V S KRF + QS+PV
Sbjct: 440 LLHQFPMPGTPQLPLRFGILVRKLWNPRAFKSHVSPHELLQEVALRSSKRFTLTQQSDPV 499
Query: 281 EFMSWLLNTLHSDLRNTKK----NTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDG 336
+F+SW LN LH L +KK TS+I+ FQG L + Q SD
Sbjct: 500 DFLSWFLNNLHLSLGGSKKPSPTPTSVIHSAFQGHLRI-----------ESQAITARSDA 548
Query: 337 GDDH----DNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVT 392
+ ++ T + PFL+L LDLPP PLF+ ++IIPQ+PL +L K++G +
Sbjct: 549 ANARLVFSESSETTSQTTPFLILTLDLPPTPLFQSTNAESIIPQIPLTTLLNKYNGLVAS 608
Query: 393 EVVRPHVARMRYR-VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPV-KNLELKDYIPLP 450
E + R+R+R + LP Y++ H++RF+KN F E+NPT+V FP ++L++ Y+ P
Sbjct: 609 EKLS---HRVRHRLLHPLPPYLLFHIKRFSKNKFVSERNPTIVTFPSPRSLDMSPYVE-P 664
Query: 451 TP---KENEKLRSKYDLIANIVHDG 472
P E + YDL+AN++ D
Sbjct: 665 NPSVCSAGEPIL--YDLVANVILDA 687
>gi|19112097|ref|NP_595305.1| ubiquitin C-terminal hydrolase Ubp10 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74638873|sp|Q9USR2.1|UBP10_SCHPO RecName: Full=Probable mRNA-splicing protein ubp10; AltName:
Full=Probable inactive ubiquitin-specific-processing
protease 10
gi|5830507|emb|CAB54815.1| ubiquitin C-terminal hydrolase Ubp10 (predicted)
[Schizosaccharomyces pombe]
Length = 502
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 173/426 (40%), Positives = 245/426 (57%), Gaps = 54/426 (12%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+NR++LDFDFEK CSVSL+NL+VYACLVCG+Y+QGRG SHAY H+L HHV++N
Sbjct: 60 YLDTINRKLLDFDFEKVCSVSLTNLSVYACLVCGRYFQGRGPSSHAYFHALTENHHVFVN 119
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------G 193
T K Y LP+ Y++ +L+DI +V G
Sbjct: 120 CSTLKFYVLPESYQVESSALQDIAYVMRPTFTKLEVQRLDHTPQLSYDLMLKPYVPGFVG 179
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIK D+ NV I L V P RN+FL+ +N+ +C LV R L RK+W+ + FK
Sbjct: 180 MNNIKNNDYFNVVIHMLAHVKPFRNYFLL-KNFDNCPQ-LVQRLAILIRKLWNHKAFKSH 237
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK----KNTSIIYECFQ 309
VSP E +Q V S K++ I Q +PVEF+SW LNTLH+ L K K TSI++ FQ
Sbjct: 238 VSPQELIQEVTVLSHKKYSINEQKDPVEFLSWFLNTLHNCLGGKKSTIAKPTSIVHYSFQ 297
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVM 369
G + + + + Q+ EKG D + +T+ +PFL L LDLPP P+F+D
Sbjct: 298 GFVRIESQKIR-------QHAEKGEQVVFTGDRVI-QTNVVPFLYLTLDLPPKPIFQDEF 349
Query: 370 EKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEK 429
E NIIPQV L IL K++G E+ R R+ + P Y I H++RF KNN+F E+
Sbjct: 350 EGNIIPQVELKEILNKYNGVHTQELAG---MRRRFHLMTAPPYFIFHIKRFMKNNYFTER 406
Query: 430 NPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHD----GKPEGGFYRVFVQR 485
N T+V FP+ + ++ +I + N K+ +KY+L+ANI+H+ + E +R+ ++
Sbjct: 407 NQTIVTFPLDDFDMSPFIDDSFIQSNPKISTKYNLVANIIHESVTHAEEEFHNFRIQIRN 466
Query: 486 KSEELW 491
S W
Sbjct: 467 PSTNKW 472
>gi|313228455|emb|CBY23606.1| unnamed protein product [Oikopleura dioica]
Length = 582
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 178/437 (40%), Positives = 246/437 (56%), Gaps = 60/437 (13%)
Query: 105 CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVY 164
CPYLDT++R +LDFDFEK CSVSLS+ NVY CL+C KY+QGRG+ +HAY H+L+ H+VY
Sbjct: 87 CPYLDTIHRAILDFDFEKLCSVSLSHNNVYCCLICSKYFQGRGKGTHAYLHALDCKHYVY 146
Query: 165 INLRTEKVYCLPDGYEINDPSLEDIRH--------------------------------- 191
+NL K YCLPD YEI DPSL+DI +
Sbjct: 147 LNLHNAKFYCLPDNYEIVDPSLDDILYQLNPMFTQEDLKELHYYEEVMTKKLVAFRRNGS 206
Query: 192 ------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI---PENYRHCKSPLVHRFGDLTR 242
+G+NNIK D++NV IQ L +V R+ FL+ N + ++ R G+L R
Sbjct: 207 KYWTGLIGMNNIKHNDYINVVIQGLAQVPKFRDHFLVRTFAGNKQTSDRIMLRRLGELLR 266
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKN-- 300
K+W +++ VSPHEFLQ+V+ SK RF+ + N EF++W LN+L +R +KN
Sbjct: 267 KLWKNHHYRPHVSPHEFLQSVVIESKGRFQFTERGNAGEFLTWFLNSLDKVMRKYEKNKE 326
Query: 301 TSIIYECFQGELEVV-KEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDL 359
+S I F+GE+EV + IP +S EK + R F+ L LDL
Sbjct: 327 SSFIRNIFEGEIEVTSRRIPNPELS----EEEKRKLLQLPKYKFEGVSERQKFMFLLLDL 382
Query: 360 PPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVV-----RPHVARMRYRVTRLPKYMI 414
P PLF D ++ IPQV + +L+KF+G+ E R R+RV RLP +I
Sbjct: 383 PAKPLFVDPHKQIPIPQVHINTLLEKFNGQQEKEYKLKGEDRRDPLLKRFRVVRLPDVLI 442
Query: 415 LHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKP 474
++RFTKNNFFVEKNPT+V +PV +L++ Y +E +DL+ANIVHDG+P
Sbjct: 443 FQIQRFTKNNFFVEKNPTIVQYPVSSLDMGPYCLEDDGQE------IFDLVANIVHDGEP 496
Query: 475 EGGFYRVFVQRKSEELW 491
+ G YR+ V K +W
Sbjct: 497 KDGSYRIHVNHKLTNMW 513
>gi|225680871|gb|EEH19155.1| U4/U6.U5 tri-snRNP-associated protein [Paracoccidioides
brasiliensis Pb03]
Length = 615
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 186/469 (39%), Positives = 262/469 (55%), Gaps = 61/469 (13%)
Query: 47 DDDDEEEEYGGRGDSGAKVGQNGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCP 106
DD+ ++ D + + G + D+DE+E ++ +++ E D
Sbjct: 52 DDERNGKDILAAADQEEEEIEEGSAHQIPISDEDEEESAVS---APARQTAPTEGYSDL- 107
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+ R VLDFDFEK CSVSLSN+NVYACLVCG+YYQGRG KSHAY H+L+ GHHV++N
Sbjct: 108 YLDTIQRSVLDFDFEKQCSVSLSNINVYACLVCGRYYQGRGPKSHAYFHALDVGHHVFVN 167
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------G 193
+ T+KVY LP+GYE+ SL+DI++V G
Sbjct: 168 METKKVYVLPEGYEVKSSSLDDIKYVVDPQYKKEEVTKLDKVVIDAVDLAGKRYRPGFVG 227
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIK D++NV +Q L V P+RNFFL+ L RFG L RK+W+ R FK
Sbjct: 228 MNNIKSNDYLNVIVQVLAHVRPIRNFFLLHRFPTPGTPQLPLRFGILVRKLWNPRAFKSH 287
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK----NTSIIYECFQ 309
VSPHE LQ V S KRF + QS+PVEF+SW LN LH L +K+ TS+I+ FQ
Sbjct: 288 VSPHELLQEVALRSSKRFTLTQQSDPVEFLSWFLNNLHLSLGGSKRPSPTPTSVIHTAFQ 347
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDH----DNITTETSRMPFLMLGLDLPPPPLF 365
G L + Q SD + ++ +T + PFL+L LDLPP PLF
Sbjct: 348 GHLRI-----------ESQAITARSDAANARLVFSESSSTTSQTTPFLILTLDLPPTPLF 396
Query: 366 KDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYR-VTRLPKYMILHMRRFTKNN 424
+ +++IPQVPL +L K++G +E + R+R+R + LP Y++ H++RF+KN
Sbjct: 397 QSTNAESVIPQVPLTTLLNKYNGLIASEKLS---HRVRHRLLHPLPPYLLFHIKRFSKNK 453
Query: 425 FFVEKNPTLVNFPV-KNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG 472
F E+NPT+V FP ++L++ Y+ T YDL+AN++ D
Sbjct: 454 FVSERNPTIVTFPSPRSLDMSPYVEPNTSICAPGEPIWYDLVANVILDA 502
>gi|226292573|gb|EEH47993.1| U4/U6.U5 tri-snRNP-associated protein [Paracoccidioides
brasiliensis Pb18]
Length = 615
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 186/469 (39%), Positives = 262/469 (55%), Gaps = 61/469 (13%)
Query: 47 DDDDEEEEYGGRGDSGAKVGQNGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCP 106
DD+ ++ D + + G + D+DE+E ++ +++ E D
Sbjct: 52 DDERNGKDILAAADQEEEEIEEGSAHQIPISDEDEEESAVS---APARQTAPTEGYSDL- 107
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+ R VLDFDFEK CSVSLSN+NVYACLVCG+YYQGRG KSHAY H+L+ GHHV++N
Sbjct: 108 YLDTIQRSVLDFDFEKQCSVSLSNINVYACLVCGRYYQGRGPKSHAYFHALDVGHHVFVN 167
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------G 193
+ T+KVY LP+GYE+ SL+DI++V G
Sbjct: 168 METKKVYVLPEGYEVKSSSLDDIKYVVDPQYKKEEVTKLDKVVIDAVDLAGKRYRPGFVG 227
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIK D++NV +Q L V P+RNFFL+ L RFG L RK+W+ R FK
Sbjct: 228 MNNIKSNDYLNVIVQVLAHVRPIRNFFLLHRFPTPGTPQLPLRFGILVRKLWNPRAFKSH 287
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK----NTSIIYECFQ 309
VSPHE LQ V S KRF + QS+PVEF+SW LN LH L +K+ TS+I+ FQ
Sbjct: 288 VSPHELLQEVALRSSKRFTLTQQSDPVEFLSWFLNNLHLSLGGSKRPSPTPTSVIHTAFQ 347
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDH----DNITTETSRMPFLMLGLDLPPPPLF 365
G L + Q SD + ++ +T + PFL+L LDLPP PLF
Sbjct: 348 GHLRI-----------ESQAITARSDAANARLVFSESSSTTSQTTPFLILTLDLPPTPLF 396
Query: 366 KDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYR-VTRLPKYMILHMRRFTKNN 424
+ +++IPQVPL +L K++G +E + R+R+R + LP Y++ H++RF+KN
Sbjct: 397 QSTNAESVIPQVPLTTLLNKYNGLIASEKLS---HRVRHRLLHPLPPYLLFHIKRFSKNK 453
Query: 425 FFVEKNPTLVNFPV-KNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG 472
F E+NPT+V FP ++L++ Y+ T YDL+AN++ D
Sbjct: 454 FVSERNPTIVTFPSPRSLDMSPYVEPNTSICAPGEPIWYDLVANVILDA 502
>gi|388582119|gb|EIM22425.1| putative U4/U6.U5 tri-snRNP-associated protein [Wallemia sebi CBS
633.66]
Length = 449
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 169/405 (41%), Positives = 243/405 (60%), Gaps = 55/405 (13%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDTVNR +LDFDFEK CSV+LSN ++Y CL+CGKYYQGR + S AY HS++ HHVY+
Sbjct: 11 YLDTVNRHLLDFDFEKVCSVTLSNKSIYCCLICGKYYQGRSKTSAAYNHSIDEEHHVYLG 70
Query: 167 LRTEKVYCLPDGYEINDPSLEDIR--------------------------------HVGL 194
L +++ Y LP+ Y+++D SL DI ++GL
Sbjct: 71 LDSKQFYILPENYKVDDNSLADILKVLEPSYESGDLDKLDSDLVGQDLNKNDYLVGYIGL 130
Query: 195 NNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQV 254
NN+ D+ NV + L + PLRN FL+ + CK+ L+ R+ +++W+ + FK QV
Sbjct: 131 NNMSNNDYANVILNMLTHIRPLRNHFLLLND---CKTELLRRYSLFNKRVWNDKLFKSQV 187
Query: 255 SPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NTSIIYECFQGELE 313
SPHE LQ + K S +F I S+PVEF+++LLN LH DL KK N+SIIY+ FQG+L
Sbjct: 188 SPHEVLQLITKLSANKFNIQNSSDPVEFLTFLLNQLHKDLGGNKKPNSSIIYQLFQGQLR 247
Query: 314 VVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNI 373
+ + I D+N E + D +TT + PFL+L DLPP P+F D +NI
Sbjct: 248 MTSQ----KIIQLDEN-EDINKKFIKEDKVTTINT--PFLILSCDLPPKPVFND--NENI 298
Query: 374 IPQVPLFNILKKFDGETVTEVVRPHVARMR-YRVTRLPKYMILHMRRFTKNNFFVEKNPT 432
IPQV L ++LKK+DG T E H+ + R Y++T+LPKY+++H +RF+KN F E N T
Sbjct: 299 IPQVSLGDVLKKYDGVTTQE----HLGQSRQYKLTKLPKYLLIHFKRFSKNRFTSEYNQT 354
Query: 433 LVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGG 477
+VN+P+ ++ KDY+ E + + YDL+ NI H+ + G
Sbjct: 355 IVNYPISGVDFKDYVD-----STENINTVYDLVGNISHEHQATAG 394
>gi|376319206|ref|NP_001243657.1| U4/U6.U5 tri-snRNP-associated protein 2 isoform 4 [Homo sapiens]
gi|410035306|ref|XP_003949873.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Pan
troglodytes]
gi|194379788|dbj|BAG58246.1| unnamed protein product [Homo sapiens]
Length = 462
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 183/433 (42%), Positives = 245/433 (56%), Gaps = 78/433 (18%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+N F F + GRG KSHAY HS++ HH
Sbjct: 25 RHCPYLDTIN------SFSPFPT-------------------GRGLKSHAYIHSVQFSHH 59
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL T K YCLPD YEI D SLEDI +V
Sbjct: 60 VFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLP 119
Query: 193 ---GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTR 242
GLNNIK D+ N +Q+L V PLRN+FL +NY++ K P LV RFG+L R
Sbjct: 120 GIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMR 179
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNT 301
K+W+ RNFK VSPHE LQAV+ SKK F+I Q + V+F+SW LN LHS L KK
Sbjct: 180 KLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKK 239
Query: 302 SIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLP 360
+I+ + FQG + + K++P + ++ + D++ E++ F+ L LDLP
Sbjct: 240 TIVTDVFQGSMRIFTKKLPHPDLPAEEK---EQLLHNDEYQETMVEST---FMYLTLDLP 293
Query: 361 PPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE--VVRPHVARMRYRVTRLPKYMILHMR 418
PL+KD E+ IIPQVPLFNIL KF+G T E + + + R+++T+LP Y+I ++
Sbjct: 294 TAPLYKDEKEQLIIPQVPLFNILAKFNGITEKEYKTYKENFLK-RFQLTKLPPYLIFCIK 352
Query: 419 RFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGF 478
RFTKNNFFVEKNPT+VNFP+ N++L++Y+ ++ + YDLIANIVHDGKP G
Sbjct: 353 RFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQAVHKN--TTYDLIANIVHDGKPSEGS 410
Query: 479 YRVFVQRKSEELW 491
YR+ V W
Sbjct: 411 YRIHVLHHGTGKW 423
>gi|219122453|ref|XP_002181559.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406835|gb|EEC46773.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 474
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 177/445 (39%), Positives = 246/445 (55%), Gaps = 78/445 (17%)
Query: 105 CPYLDTVNRQVLDFDFEKFCSVSL-SNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHV 163
CPYLDT+ R +LDFDFE CS+S+ + ++Y CLVCGKY++GRG ++ AYTHS+E H V
Sbjct: 19 CPYLDTIQRSLLDFDFEPACSISMQTGPHIYGCLVCGKYFRGRGIQTPAYTHSVEESHFV 78
Query: 164 YINLRTEKVYCLPDGYEINDPSLEDIR--------------------------------- 190
+++L +CLPD YEI D SL DI+
Sbjct: 79 FVHLTNGTFHCLPDDYEIKDTSLVDIQDALHPKFSPSEIRTIDTHTELSRDLFGRRYLPG 138
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL--------IPENYRHCKSPLVHR----FG 238
VGLNN+ +TD VN +Q+L V PLR+FFL + + L H FG
Sbjct: 139 FVGLNNLHKTDCVNAAVQALAHVQPLRDFFLSKSHNESLLSSKKSQASNRLAHHVAQCFG 198
Query: 239 DLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK 298
+L RKIW ++ FK V PH +QA+ ASKKRF++GVQ+ E ++WLL+ LH +
Sbjct: 199 ELVRKIWSSKRFKSTVDPHMLIQAIATASKKRFKVGVQAEAGELVAWLLHRLHVGTGGGR 258
Query: 299 K-NTSIIYECFQGELEVVKEIPKNTISGNDQN--TEKGSDGGDDHDNITTETSRMPFLML 355
K +SI+++ FQG K + NDQ E D H FL L
Sbjct: 259 KAGSSIVHKTFQG---------KEGLKMNDQEVLVEIEETATDTH-----------FLQL 298
Query: 356 GLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVV-RPHVA-RMRYRVTRLPKYM 413
LD+P PLF+D +IPQ PL ++LKKFDG T ++ + R VA R RY++ +LP Y+
Sbjct: 299 TLDIPEKPLFRDEDGGLVIPQEPLVSVLKKFDGVTFSDALNRSGVAQRKRYQLLKLPDYL 358
Query: 414 ILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYI-----PLPTPKE--NEKLRSKYDLIA 466
ILH+ RF N + EKNP++V FPVKNL+L +Y+ LPT ++ +R KYDL+A
Sbjct: 359 ILHLARFKDNRYTKEKNPSIVMFPVKNLDLGEYVHKEKQSLPTEEQIRGMTVRQKYDLVA 418
Query: 467 NIVHDGKPEGGFYRVFVQRKSEELW 491
NI H+ + G Y+ VQ ++ W
Sbjct: 419 NITHESPADDGHYKCHVQHQATRQW 443
>gi|367037283|ref|XP_003649022.1| hypothetical protein THITE_2107139 [Thielavia terrestris NRRL 8126]
gi|346996283|gb|AEO62686.1| hypothetical protein THITE_2107139 [Thielavia terrestris NRRL 8126]
Length = 559
Score = 307 bits (787), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 182/407 (44%), Positives = 251/407 (61%), Gaps = 55/407 (13%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R VLDFDFEK CSV+LSN+NVYACLVCGKY+QGRG KSHAY H+L+ HHV+IN
Sbjct: 92 YLDTIDRNVLDFDFEKLCSVTLSNINVYACLVCGKYFQGRGPKSHAYFHALDEDHHVFIN 151
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------G 193
+ T+KVY LP+GYE+ SL+DI++V G
Sbjct: 152 MSTQKVYVLPEGYEVKSKSLDDIKYVSDPRYTRQEVAEFDRKPRTSWTLAGKEYTPGFVG 211
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIKE D++NV +Q+L V+PLRN+FL+ E++ LV R L RKIW+ R FK
Sbjct: 212 MNNIKENDYLNVVVQALSHVSPLRNYFLL-EDF-SAAPELVKRTSILFRKIWNPRAFKAH 269
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGE 311
VSPHE LQ + S KRF + QS+PV+F+SW LN LH L TK +S+I FQG+
Sbjct: 270 VSPHELLQEISLQSNKRFTLTTQSDPVDFLSWFLNHLHLGLGGSKTKPGSSVIQRIFQGK 329
Query: 312 LEV-VKEIPKNTISGNDQ-NTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVM 369
L+V + I T + D+ E+ +D + + +R FL+L LDLPP PLF+D
Sbjct: 330 LKVESQAITARTDTQQDRLRFEEAAD-------VKVDIAR--FLLLTLDLPPTPLFQDEQ 380
Query: 370 EKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTR-LPKYMILHMRRFTKNNFFVE 428
E+NIIPQVPL +L K++G T E+ + R RYR+ LP +++LH++RF+ N F E
Sbjct: 381 ERNIIPQVPLTTLLAKYNGVTAQEL---NAQRRRYRLMHPLPPFLLLHIKRFSHNRFVAE 437
Query: 429 KNPTLVNFPVK-NLELKDYIPLPTPKENEKLRSK--YDLIANIVHDG 472
+NPT+V F + +L+L ++ P + YDL+AN+VH+
Sbjct: 438 RNPTIVTFDARSSLDLAPFVEPPAEGGGQGAGGPIWYDLVANVVHEA 484
>gi|332239227|ref|XP_003268808.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 3
[Nomascus leucogenys]
Length = 462
Score = 307 bits (786), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 183/433 (42%), Positives = 245/433 (56%), Gaps = 78/433 (18%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+N +L F GRG KSHAY HS++ HH
Sbjct: 25 RHCPYLDTIN-SLLPFP------------------------TGRGLKSHAYIHSVQFSHH 59
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL T K YCLPD YEI D SLEDI +V
Sbjct: 60 VFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLP 119
Query: 193 ---GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTR 242
GLNNIK D+ N +Q+L V PLRN+FL +NY++ K P LV RFG+L R
Sbjct: 120 GIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMR 179
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNT 301
K+W+ RNFK VSPHE LQAV+ SKK F+I Q + V+F+SW LN LHS L KK
Sbjct: 180 KLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKK 239
Query: 302 SIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLP 360
+I+ + FQG + + K++P + ++ + D++ E++ F+ L LDLP
Sbjct: 240 TIVTDVFQGSMRIFTKKLPHPDLPAEEK---EQLLHNDEYQETMVEST---FMYLTLDLP 293
Query: 361 PPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE--VVRPHVARMRYRVTRLPKYMILHMR 418
PL+KD E+ IIPQVPLFNIL KF+G T E + + + R+++T+LP Y+I ++
Sbjct: 294 TAPLYKDEKEQLIIPQVPLFNILAKFNGITEKEYKTYKENFLK-RFQLTKLPPYLIFCIK 352
Query: 419 RFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGF 478
RFTKNNFFVEKNPT+VNFP+ N++L++Y+ ++ + YDLIANIVHDGKP G
Sbjct: 353 RFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQAVHKN--TTYDLIANIVHDGKPSEGS 410
Query: 479 YRVFVQRKSEELW 491
YR+ V W
Sbjct: 411 YRIHVLHHGTGKW 423
>gi|342321041|gb|EGU12979.1| Spindle pole body protein [Rhodotorula glutinis ATCC 204091]
Length = 674
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 175/402 (43%), Positives = 239/402 (59%), Gaps = 56/402 (13%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+NR LDFDFE+ CSV+LS+ ++YACLVCGKY+QGRG+ + AY H+L HHVYIN
Sbjct: 180 YLDTINRAALDFDFERLCSVTLSHNHIYACLVCGKYFQGRGKSTPAYAHALNEDHHVYIN 239
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRH---------------------------------VG 193
L T KVY LPDGYE++D SL DI++ VG
Sbjct: 240 LDTRKVYVLPDGYEVDDASLADIKYLLYPTFTPQMLEKIDHQTQPELDLARKEYYPGFVG 299
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLI----PENYRHCKSPLVHRFGDLTRKIWHARN 249
LNN+K ++N +Q L+ V PLR++ ++ S L R G L RK+W+
Sbjct: 300 LNNMKHNSYMNAVLQLLLHVPPLRDYLILQLDPSSTSSRPTSELTTRLGLLARKLWNPHA 359
Query: 250 FKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NTSIIYECF 308
FK QVSPHEFLQ V AS +F+I Q +P+EF+ WLLN +H DL +K +SI+Y F
Sbjct: 360 FKSQVSPHEFLQEVANASGGKFKITEQGDPLEFLKWLLNQVHRDLGGGRKPRSSIVYSAF 419
Query: 309 QGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTE--TSRMPFLMLGLDLPPPPLFK 366
QGE+ V + Q + G G +I E +++ PFL L LDLPPPPLF+
Sbjct: 420 QGEVRV----------DDQQIIKTGEFGTKPKFDIDREIKSTKTPFLFLALDLPPPPLFQ 469
Query: 367 DVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFF 426
D +E NIIPQVP+ +L K+DG T E + V + R ++TRLP ++I++ +RF N F
Sbjct: 470 DAVETNIIPQVPISAVLSKYDGSTTREDTQAGVLK-RSKITRLPPFLIVYYKRFLSNRFL 528
Query: 427 VEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANI 468
EKNPT+VNFP+K +++ +Y+ E L + YDL AN+
Sbjct: 529 EEKNPTIVNFPLKGVDMSEYV-----DSAETLAAHYDLTANL 565
>gi|156053570|ref|XP_001592711.1| hypothetical protein SS1G_05632 [Sclerotinia sclerotiorum 1980]
gi|154703413|gb|EDO03152.1| hypothetical protein SS1G_05632 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 541
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 186/443 (41%), Positives = 252/443 (56%), Gaps = 81/443 (18%)
Query: 81 EDEDDLANGYGQGQRS----RLVEVRRDCP-------YLDTVNRQVLDFDFEKFCSVSLS 129
EDE+DL NG + ++V R P YLDT+NR VLDFDFEK CS+SLS
Sbjct: 59 EDEEDLKNGMEDLEVEDEELKVVVPREKAPMEGYDDLYLDTINRSVLDFDFEKLCSISLS 118
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
N+NVYACL SHAY H+LE GHHV+IN++T+KVY LP+GYE+ + SL+DI
Sbjct: 119 NINVYACL------------SHAYFHALEVGHHVFINMQTQKVYVLPEGYEVKNKSLDDI 166
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+ V G+NNIK+ D+ NV IQ+L V PL
Sbjct: 167 KFVSDPTYTKEQVMAMDREAKTSWTLSGKEYIPGFVGMNNIKDNDYFNVIIQALSHVPPL 226
Query: 217 RNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQ 276
RNFFL+ E++R+ K L+ R L RKIW+ R FK VSPHE LQ + S K+F + Q
Sbjct: 227 RNFFLL-EDFRN-KPELIKRVSILFRKIWNPRAFKSHVSPHELLQEISLKSNKKFNLTTQ 284
Query: 277 SNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGS 334
S+PV+F+SW LN LH L TK +S+I + FQG+L+V Q +
Sbjct: 285 SDPVDFLSWFLNNLHLALGGSKTKPGSSVIQKIFQGKLKV-----------ESQAITAKA 333
Query: 335 DGGD----DHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGET 390
D GD + ++ T+ SR F++L LDLP PLF+D +E+NIIPQ+PL +IL K+DG
Sbjct: 334 DAGDRLRFEDADVKTDVSR--FMLLTLDLPAAPLFQDELERNIIPQIPLTSILAKYDGLK 391
Query: 391 VTEVVRPHVARMRYR-VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPL 449
E + R RYR + LP +++ H++RF+ N F E+NPT+V F +NL++ YI
Sbjct: 392 AQEHLN---MRKRYRLLHPLPPFLLFHIKRFSHNKFVDERNPTIVTFDARNLDMSPYIEP 448
Query: 450 PTPKENEKLRSKYDLIANIVHDG 472
YDL+ANIVH+
Sbjct: 449 DMKHARPGEPIWYDLVANIVHEA 471
>gi|323508249|emb|CBQ68120.1| related to SAD1-protein required for assembly of U4 snRNA into the
U4/U6 particle [Sporisorium reilianum SRZ2]
Length = 626
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 180/446 (40%), Positives = 248/446 (55%), Gaps = 80/446 (17%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
+ YLDT+NR VLDFDFEK CS+SLSN+NVYACLVCG+Y QGRG+ S+AY HS++ HH
Sbjct: 131 KSALYLDTINRAVLDFDFEKLCSISLSNINVYACLVCGRYLQGRGRNSYAYLHSIDDSHH 190
Query: 163 VYINLRTEKVYCLPDGYEI---NDPSLEDIRH---------------------------- 191
V++NL T + Y LPD Y + N +L+DI++
Sbjct: 191 VFMNLSTAQTYILPDNYAVPEENQAALQDIKYLLNPTFSRKTIDAIDAGPAYDLNGEQYY 250
Query: 192 ---VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHC---KSPLVHRFGDLTRKIW 245
VGLNN+ + D+VN +Q+L+ V +R++FL+ E+ R KS LV RFG L RK+W
Sbjct: 251 PGFVGLNNVGKNDYVNAVVQALVHVPAIRDYFLL-EHEREGDVEKSELVKRFGALVRKMW 309
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR---------- 295
+ + FK QVSPHEFLQ V S RF+I QS+PVEF+ WLLN LH+DL
Sbjct: 310 NPKAFKAQVSPHEFLQQVAAVSGNRFKITHQSDPVEFLGWLLNRLHADLAGGKGGKRKRG 369
Query: 296 NTKKNTSIIYECFQGELEV---------------------VKEIPKNTISGNDQNTEKGS 334
S+I + FQG ++V E T N Q E+G
Sbjct: 370 PGAAGESVISKSFQGVVQVESQPLAARSEEAEPSASAVAAQAEPLLKTQQSNGQTDEQGR 429
Query: 335 DGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVME-KNIIPQVPLFNILKKFDGETVTE 393
D ++ S PFL+L +DLPPPP E +++PQV L +L K+DG+++
Sbjct: 430 VRFDPALSVDKRDS--PFLLLAMDLPPPPPVLGGEEGGHLVPQVTLGQVLAKYDGDSLHA 487
Query: 394 VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFV-EKNPTLVNFPVKNLELKDYIPL--- 449
+ RY + RLP Y+I+H RRFTKN+ E+NPTLVNFP+K L++ ++PL
Sbjct: 488 ---SNAKLTRYALRRLPPYLIVHFRRFTKNSLGQEERNPTLVNFPIKGLDVAKHVPLLNN 544
Query: 450 -PTPKENEKLRSKYDLIANIVHDGKP 474
++ L YDL+AN+V+D P
Sbjct: 545 AQASTQDANLSEVYDLVANVVYDAVP 570
>gi|443920630|gb|ELU40516.1| spindle pole body protein [Rhizoctonia solani AG-1 IA]
Length = 532
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 188/446 (42%), Positives = 251/446 (56%), Gaps = 72/446 (16%)
Query: 80 DEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVC 139
D D++D GY + Q + R YLDTVNR LDFDFEK CSVS+SN N+Y CLVC
Sbjct: 43 DLDDEDPYAGYDEKQEN----TRAADLYLDTVNRAALDFDFEKVCSVSMSNQNIYGCLVC 98
Query: 140 GKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV------- 192
GKY+QGRG+ SHAY HS+ HHV+I+L T +VY LPDGY+++DPSL+DI++V
Sbjct: 99 GKYFQGRGKSSHAYAHSIHEDHHVFIHLETTEVYVLPDGYQVSDPSLDDIKYVLSPRFSP 158
Query: 193 ---------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPEN 225
GL NIK D+++V +Q+L+ V P+R+F L +
Sbjct: 159 AQIAKLRTDNIQTSYDLMSRPYIPGYVGLQNIKRNDYLSVIVQALLHVPPVRDFLLAMDG 218
Query: 226 --------------YRHCKSP--LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
+ K P LV RF L +K+W+ R FK QVSPHEFLQ V + S
Sbjct: 219 STVPTPKTKPSAAPIKPVKQPSELVRRFAGLAKKVWNPRLFKSQVSPHEFLQEVARVSVG 278
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQG-ELEVVKEIPKNTISGNDQ 328
+F+I Q +PVEF+ WLLN +H+DL TKK S Y LE + I K
Sbjct: 279 KFKITEQGDPVEFLGWLLNRIHADLGGTKKRGSSEYFLVGTFGLETQQVIVK-------- 330
Query: 329 NTEKGSDGGDDHDNITTETSRMP--FLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF 386
+ G H +I E + FL+L LDLPPPPLF+D +EKNIIPQV L ++L K+
Sbjct: 331 --ADAASGVKPHFDIDREIKQTTTPFLLLALDLPPPPLFQDAVEKNIIPQVSLASLLAKY 388
Query: 387 DGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDY 446
DG+T E R+R T+LP Y+ILH +RFTKNNF E+NPT+VNFP+ ++
Sbjct: 389 DGKTTQEFAG---QLKRFRCTKLPPYIILHFKRFTKNNFVEERNPTIVNFPIDGVDFSQV 445
Query: 447 IPLPTPKENEKLRSKYDLIANIVHDG 472
+ N + YDL+AN+ +
Sbjct: 446 LERSPELANAPI--IYDLVANVTQES 469
>gi|332239225|ref|XP_003268807.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 2
[Nomascus leucogenys]
Length = 449
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 173/391 (44%), Positives = 233/391 (59%), Gaps = 53/391 (13%)
Query: 145 GRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV------------ 192
GRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI +V
Sbjct: 29 GRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQQIAN 88
Query: 193 ---------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKS 231
GLNNIK D+ N +Q+L V PLRN+FL +NY++ K
Sbjct: 89 LDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKR 148
Query: 232 P-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMS 284
P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK F+I Q + V+F+S
Sbjct: 149 PPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLS 208
Query: 285 WLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDN 342
W LN LHS L KK +I+ + FQG + + K++P + ++ + D++
Sbjct: 209 WFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEK---EQLLHNDEYQE 265
Query: 343 ITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE--VVRPHVA 400
E++ F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+G T E + +
Sbjct: 266 TMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGITEKEYKTYKENFL 322
Query: 401 RMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRS 460
+ R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+ N++L++Y+ ++ +
Sbjct: 323 K-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQAVHK--NT 379
Query: 461 KYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
YDLIANIVHDGKP G YR+ V W
Sbjct: 380 TYDLIANIVHDGKPSEGSYRIHVLHHGTGKW 410
>gi|350582197|ref|XP_003354795.2| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Sus scrofa]
Length = 431
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 171/362 (47%), Positives = 217/362 (59%), Gaps = 57/362 (15%)
Query: 74 DDDEDKD-EDEDDLANGY--GQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSN 130
D DED + E E NG + QRSR CPYLDT+NR VLDFDFEK CS+SLS+
Sbjct: 77 DVDEDSEPEREVRAKNGRLDSEDQRSR------HCPYLDTINRSVLDFDFEKLCSISLSH 130
Query: 131 LNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIR 190
+N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 131 INAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDIT 190
Query: 191 HV---------------------------------GLNNIKETDFVNVTIQSLMRVTPLR 217
+V GLNNIK D+ N +Q+L V PLR
Sbjct: 191 YVLKPTFTKQQIANLEKQVKFSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLR 250
Query: 218 NFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKR 270
N+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 251 NYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKT 310
Query: 271 FRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGNDQ 328
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + ++
Sbjct: 311 FQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEK 370
Query: 329 NTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDG 388
+ D++ E++ F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+G
Sbjct: 371 EQLLHN---DEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNG 424
Query: 389 ET 390
T
Sbjct: 425 IT 426
>gi|431899736|gb|ELK07687.1| U4/U6.U5 tri-snRNP-associated protein 2 [Pteropus alecto]
Length = 646
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 168/363 (46%), Positives = 216/363 (59%), Gaps = 52/363 (14%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD 387
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+
Sbjct: 370 KEQLLHN---DEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFN 423
Query: 388 GET 390
G T
Sbjct: 424 GIT 426
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 63/89 (70%), Gaps = 2/89 (2%)
Query: 403 RYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKY 462
R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+ N++L++Y+ ++ + Y
Sbjct: 521 RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQAVHK--HTTY 578
Query: 463 DLIANIVHDGKPEGGFYRVFVQRKSEELW 491
DLIANIVHDGKP G YR+ V W
Sbjct: 579 DLIANIVHDGKPSEGSYRIHVLHHGTGKW 607
>gi|83769188|dbj|BAE59325.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 599
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 195/488 (39%), Positives = 272/488 (55%), Gaps = 53/488 (10%)
Query: 17 VKSVKVVEQSSPSPPRLGFENPLLPLANTYDDDDEEEEYGGRGDSGAKVGQNGRTGEDDD 76
+K +V + PR G LPL + EE+E G D A Q G E+
Sbjct: 21 IKKARVEDDIEEGDPRHG----ALPLRRASGQEREEDERKG-NDILAAADQEGEELEEAA 75
Query: 77 EDKDEDEDDLANGY------GQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSN 130
D + D ++S +E D YLDT+NR++LDFDFEK CSV+LSN
Sbjct: 76 VDNGAESDFDDADDDRPVIAAPKRQSAPMEGYSDL-YLDTINREILDFDFEKLCSVTLSN 134
Query: 131 LNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIR 190
+NVYACLVCGKY+QGRG KSHAY H LE GHHV+IN+ T+KVY LP+GYE+ + SL+DI+
Sbjct: 135 INVYACLVCGKYFQGRGPKSHAYFHGLEVGHHVFINMGTKKVYVLPEGYEVKNKSLDDIK 194
Query: 191 HVGLNNIKETDFVNV-----------------TIQSLMRVTPLRNFFLIPENYRHCKSPL 233
+V + + + + +Q L V P+RN+FL+ E L
Sbjct: 195 YVVDPHYSKEEVSKLDKEVHDAFDLAGNRYRPVVQLLAHVFPIRNYFLLHEFPTPGTPQL 254
Query: 234 VHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSD 293
RF L RK+W+ + F+ VSPHE LQ + S KRF + QS+PVEF+SW LN LH
Sbjct: 255 ALRFSTLVRKLWNPKAFRSHVSPHELLQEIALRSSKRFTLTQQSDPVEFLSWFLNNLHLS 314
Query: 294 LRNTKK----NTSIIYECFQGELEVVKEIPKNTISGNDQNTE-KGSDGGDDHDNITTETS 348
L +KK TS++ FQG L + E T + QN ++ GD I ++T+
Sbjct: 315 LGGSKKPSKTPTSVVQAAFQGHLRI--ESQAITAHSDTQNARLVFTESGD----IKSQTT 368
Query: 349 RMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYR-VT 407
PFL+L LDLPP PLF+ ++IIP VPL +L K++G T +E + R+R+R +
Sbjct: 369 --PFLILTLDLPPTPLFQSANRESIIPHVPLTTLLNKYNGITASEKL---AHRVRHRLLH 423
Query: 408 RLPKYMILHMRRFTKNNFFVEKNPTLVNFPV-KNLELKDYI---PLPTPKENEKLRSKYD 463
LP Y++ H++RF+KN F E+NPT+V FP ++L++ Y+ P P L YD
Sbjct: 424 PLPPYLLFHIKRFSKNRFVSERNPTIVTFPSPRSLDMSPYVEPNPDIWPPGEPIL---YD 480
Query: 464 LIANIVHD 471
L+ANI+ D
Sbjct: 481 LVANIILD 488
>gi|449666515|ref|XP_002155067.2| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like, partial
[Hydra magnipapillata]
Length = 427
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 172/393 (43%), Positives = 236/393 (60%), Gaps = 53/393 (13%)
Query: 146 RGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH-------------- 191
RG SHAYTHS+ GHHVY+NL T K YCLPD YEI DPSLEDI++
Sbjct: 1 RGNNSHAYTHSVHLGHHVYLNLHTLKFYCLPDNYEIIDPSLEDIKYLLQPTFSKEHIRLL 60
Query: 192 -------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP 232
VGLNNIK D++NV +Q+L+ V P+RN+FL E+Y + K P
Sbjct: 61 DSSTKVSRALNGTVYIPGVVGLNNIKANDYLNVVLQALVFVPPIRNYFLRVEHYNNIKRP 120
Query: 233 -------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRF---RIGVQSNPVEF 282
LV RFG+LTRKIW+ RNFK VSPHE LQ+V+ SK R ++ +P+EF
Sbjct: 121 PGDIMFPLVQRFGELTRKIWNPRNFKSHVSPHEMLQSVLIFSKLRHSFTKVNHYGDPIEF 180
Query: 283 MSWLLNTLHSDLRNTKKN-TSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHD 341
+SW +N LH L TKK+ +S+IY+ F+GE+ K+ + + +D+ E+ +++
Sbjct: 181 LSWFINALHFTLNGTKKSKSSVIYKAFRGEM---KQFYRKLPATDDKEIERKLLESEEYK 237
Query: 342 NITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEV-VRPHVA 400
+ + PFL L LD+P PLFKD +E+N IPQVPL N+L+KF+G E ++
Sbjct: 238 EKESVS---PFLYLTLDVPASPLFKDELEQNAIPQVPLINLLQKFNGHQEKEYKTYNEIS 294
Query: 401 RMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRS 460
++ +T+LPKY+IL ++RF N FFVEKNPT+VNFPVK L++K+++ +
Sbjct: 295 VKKFILTKLPKYLILFIKRFNNNTFFVEKNPTVVNFPVKGLDMKEFLLDDKEVLENNKDT 354
Query: 461 KYDLIANIVHDGKPEG--GFYRVFVQRKSEELW 491
YDLIANI HDG+P G YRV V K + W
Sbjct: 355 CYDLIANISHDGEPGSGKGTYRVHVHHKGNKEW 387
>gi|320166703|gb|EFW43602.1| ubiquitin specific peptidase 39 [Capsaspora owczarzaki ATCC 30864]
Length = 492
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 162/400 (40%), Positives = 223/400 (55%), Gaps = 57/400 (14%)
Query: 105 CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVY 164
CPYLDTV+R LDFDFEK CSVSLS+ N+YACL+CGKY+Q Q S+ +Y
Sbjct: 97 CPYLDTVDRSQLDFDFEKVCSVSLSDFNIYACLICGKYFQAIQQLDTVSRQSVGLDGVLY 156
Query: 165 INLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE 224
+ P + VGLNNI D++NV IQ L R+ PLR+F L +
Sbjct: 157 L------------------PGV-----VGLNNIIHNDYMNVIIQMLNRIQPLRDFLLSSQ 193
Query: 225 NYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMS 284
CK+PL +L RKIW+ RNFKG VSPH LQ++ AS KRF + Q++P + +S
Sbjct: 194 ADEACKTPLTSAASELFRKIWNPRNFKGHVSPHVMLQSIASASSKRFTLAQQADPSDLLS 253
Query: 285 WLLNTLHSDLRNTKKN-TSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGD----- 338
WLLNT H+DL T+++ +SII++ FQG ++++ + + + E
Sbjct: 254 WLLNTFHTDLGGTRRSGSSIIHKIFQGSMKMISRKMPAVVDEEEASEEPAVHAAKRARLE 313
Query: 339 ---DHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVV 395
D + S PF+ L LDLPP PLFKD KN IPQ + +T ++
Sbjct: 314 EDVAEDEYEDKVSESPFMFLSLDLPPAPLFKDETGKNFIPQ----------EYKTGRDLF 363
Query: 396 RPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKEN 455
R+ +T LP+Y+IL +RRFTKNNFF+EKN T+VNFP++ L+++DY+ EN
Sbjct: 364 MK-----RFILTSLPQYLILVVRRFTKNNFFLEKNATIVNFPLRGLDMRDYV------EN 412
Query: 456 EKL--RSKYDLIANIVHDGKPEG--GFYRVFVQRKSEELW 491
+ YDL+ANI HDG E G Y V K+ + W
Sbjct: 413 AAAVGSTTYDLVANIYHDGSLEAGQGTYHAHVLHKATKSW 452
>gi|224015415|ref|XP_002297362.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220967962|gb|EED86325.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 487
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 176/471 (37%), Positives = 250/471 (53%), Gaps = 110/471 (23%)
Query: 105 CPYLDTVNRQVLDFDFEKFCSVSL-SNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHV 163
CPYLDT+NR LDFDF CS +L S+ ++YACLVCGK+++G+G+++ AYTHS+E GH V
Sbjct: 9 CPYLDTINRTHLDFDFSPHCSSTLESSPHIYACLVCGKFFRGKGRQTPAYTHSVEEGHFV 68
Query: 164 YINLRTEKVYCLPDGYEIN---DPSLEDIR------------------------------ 190
+++L +CLPDGYEI+ +PSL DI
Sbjct: 69 FVHLSNGTFWCLPDGYEISTKEEPSLSDISLALNPSFTSEEVGRLDDNQELARDLFGRRY 128
Query: 191 ---HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLI--------PENYRHCKSPLVHRFGD 239
VGLNN+ +TD++N +Q+L V PLR+FFL+ P +Y + SPL F
Sbjct: 129 LPGFVGLNNLNKTDYLNCVVQALAHVRPLRDFFLLAGSQTSHQPLSYANF-SPLAKAFSL 187
Query: 240 LTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL----- 294
L R +W + FK V PH +QAV AS KR+ +G Q+ +F++WLL+ LH +
Sbjct: 188 LLRNMWSSHRFKSNVDPHMLVQAVSVASNKRYHVGKQAEAGDFLAWLLHQLHVGIGGSVG 247
Query: 295 --RNTKKNTSIIYECFQGELEVV--KEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM 350
+ + +++I++ F G++E V K++ + T+ T S+ ++ TET
Sbjct: 248 KKKRSSGGSTVIHQTFMGKVETVARKQLKRETL------TSLASETVIVEESTVTETD-- 299
Query: 351 PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVA---------- 400
FL L LD+P PLFKD +IPQ PL N+L+KFDG + + + +
Sbjct: 300 -FLQLTLDIPEKPLFKDADGGLVIPQEPLVNVLRKFDGVSFCDALALQKSEEASASNTVD 358
Query: 401 --------RMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTP 452
+ RYR+ +LP Y+ILH+ RF NNF VEKNPT+V FPVKN +L
Sbjct: 359 GGSVVVSKKRRYRLKKLPNYLILHLSRFKHNNFTVEKNPTIVMFPVKNFDL--------- 409
Query: 453 KENEKLRSKYDLIANIVHD--------GKP----EGGFYRVFVQRKSEELW 491
+KYDL+ANI HD GK E G YR VQ K+ W
Sbjct: 410 -------NKYDLVANITHDLPAEVGREGKQRNPLEEGSYRCHVQHKATGQW 453
>gi|320588581|gb|EFX01049.1| snRNP assembly protein [Grosmannia clavigera kw1407]
Length = 566
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 171/454 (37%), Positives = 234/454 (51%), Gaps = 93/454 (20%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R VLDFDFEK CSVSLSN+NVYACLVCG+YYQGRG +SHAY H+L+ HHV+IN
Sbjct: 45 YLDTIDRNVLDFDFEKLCSVSLSNINVYACLVCGRYYQGRGPRSHAYFHALDEDHHVFIN 104
Query: 167 LRTEKVYCLPDGYEINDPSLEDIR------------------------------------ 190
++T++VY LP+GYE++ SL+DI+
Sbjct: 105 MQTQRVYVLPEGYEVHSRSLDDIKFVADPRYTRADVAGLDGGRRQTQTQTQTQQHHVTLA 164
Query: 191 -------HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRH--------------- 228
+VG+NNIKE D++NV +Q+L V PLRNFFL+ E
Sbjct: 165 GRPYAPGYVGMNNIKENDYLNVVVQALAHVPPLRNFFLLDEVAAQEARRRSSNTATTGEK 224
Query: 229 -----CKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFM 283
LV RFG L RKIW+ R FK VSPHE LQ V S KRF + QS+P +F+
Sbjct: 225 RPEAAANRELVRRFGLLVRKIWNPRAFKAHVSPHELLQEVALRSSKRFTLTAQSDPADFL 284
Query: 284 SWLLNTLHSDLRNTKKN--TSIIYECFQGELEVVKEI-----------------PKNTIS 324
+W LN LH L ++ +SI+ FQG + V E +
Sbjct: 285 AWFLNHLHLGLGGSRSRPASSIVQRVFQGRVRVRSETLAAVGARAAAAAADDAMQVDDDD 344
Query: 325 GNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILK 384
ND+ + + G + S PP D E+NIIPQVPL +L
Sbjct: 345 NNDKASSYHTSG-----PLPATASPSLPPPPPPSSSIPPPPGDEQERNIIPQVPLAALLA 399
Query: 385 KFDGETVTEVVRPHVARMRYRVTR-LPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLEL 443
K+DGE+ E R R+R+ LP Y++LH++RF+ N F E+NPT+V F L++
Sbjct: 400 KYDGESARE---QGDVRRRFRLQAPLPPYLVLHIKRFSANKFVAERNPTIVTFDPLGLDM 456
Query: 444 KDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGG 477
+ ++ + + YDL+AN+VH+ GG
Sbjct: 457 RPFVDGEPGSADSPI--PYDLVANVVHEAVRAGG 488
>gi|67528520|ref|XP_662062.1| hypothetical protein AN4458.2 [Aspergillus nidulans FGSC A4]
gi|40741033|gb|EAA60223.1| hypothetical protein AN4458.2 [Aspergillus nidulans FGSC A4]
Length = 597
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 167/412 (40%), Positives = 234/412 (56%), Gaps = 84/412 (20%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+NR +LDFDFEK CS GRG KS+AY H+LE HHV+IN
Sbjct: 111 YLDTINRHILDFDFEKLCS-------------------GRGPKSYAYFHALEVSHHVFIN 151
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------G 193
+ T+KVY LP+GYE+ + SL+DI++V G
Sbjct: 152 MGTKKVYVLPEGYEVKNKSLDDIKYVVDPYYTKDEVAKLDKVVTDAFDLSGRRYRPGFVG 211
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIK D++NV Q+L V P+RN+FL+ E + LV RFG L RK+W+ + F+
Sbjct: 212 MNNIKANDYLNVVAQALAHVLPIRNYFLLHEFPQPGTPQLVLRFGTLVRKLWNPKAFRSH 271
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK----NTSIIYECFQ 309
VSPHE LQ V S KRF + QS+PVEF+SW LN LH L ++K TS+++ FQ
Sbjct: 272 VSPHELLQEVALRSSKRFTLTQQSDPVEFLSWFLNNLHLALGGSRKPSKTPTSVVHAAFQ 331
Query: 310 GELEVVKEIPKNTISGNDQN-----TEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPL 364
G L + E T + QN TE G+ I ++T+ PFL+L LDLPP PL
Sbjct: 332 GHLRI--ESQAITAHSDTQNARLVFTESGT--------INSQTT--PFLILTLDLPPTPL 379
Query: 365 FKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTR-LPKYMILHMRRFTKN 423
F+ ++IIPQVPL +L K++G T +E + R+R+R+ LP Y++ H++RF+KN
Sbjct: 380 FQSANRESIIPQVPLTTLLNKYNGITASEKL---AHRVRHRLLHPLPPYLMFHIKRFSKN 436
Query: 424 NFFVEKNPTLVNFPV-KNLELKDYIPLPTPK---ENEKLRSKYDLIANIVHD 471
F E+NPT+V FP ++L++ Y+ P P+ E + YDL+ANI+ D
Sbjct: 437 RFVSERNPTIVTFPSPRSLDMSPYVE-PNPEIWPPGEPIL--YDLVANIILD 485
>gi|240281183|gb|EER44686.1| U4/U6.U5 tri-snRNP-associated protein [Ajellomyces capsulatus H143]
Length = 587
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 171/437 (39%), Positives = 236/437 (54%), Gaps = 86/437 (19%)
Query: 74 DDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNV 133
D DE++ +E ++ +++ E D YLDT+ R VLDFDFEK CS+SLSN+NV
Sbjct: 81 DSDEEEAGEESAIS---APARQTAPAEGYSDL-YLDTIQRSVLDFDFEKQCSISLSNINV 136
Query: 134 YACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH-- 191
YACLVCGKYYQGRG KSHAY H+L+ GHHV++N+ T+KVY LP+GYE+ SL+DI++
Sbjct: 137 YACLVCGKYYQGRGPKSHAYFHALDVGHHVFVNMETKKVYVLPEGYEVKSRSLDDIKYVV 196
Query: 192 -------------------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFF 220
VG+NNIK D++NV +Q L V P+RNFF
Sbjct: 197 DPQYKKEEVAKLDKAVTDAWDLAGKRYRPGFVGMNNIKSNDYLNVIVQVLSHVRPIRNFF 256
Query: 221 LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPV 280
L+ + L RFG L RK+W+ R FK VSPHE LQ V S KRF + QS+PV
Sbjct: 257 LLHQFPMPGTPQLPLRFGILVRKLWNPRAFKSHVSPHELLQEVALRSSKRFTLTQQSDPV 316
Query: 281 EFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDH 340
+F+SW LN LH L +KK + P T N N
Sbjct: 317 DFLSWFLNNLHLSLGGSKKPS-----------------PTPTSRNNLANNT--------- 350
Query: 341 DNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVA 400
F + LDLP F+ + IIPQ+PL +L K++G +E +
Sbjct: 351 -----------FPHITLDLPSHTTFQSQC-RIIIPQIPLTTLLNKYNGLVASEKLS---H 395
Query: 401 RMRYR-VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPV-KNLELKDYIPLPTP---KEN 455
R+R+R + LP Y++ H++RF+KN F E+NPT+V FP ++L++ Y+ P P
Sbjct: 396 RVRHRLLHPLPPYLLFHIKRFSKNKFVSERNPTIVTFPSPRSLDMSPYVE-PNPSVCSAG 454
Query: 456 EKLRSKYDLIANIVHDG 472
E + YDL+AN++ D
Sbjct: 455 EPIL--YDLVANVILDA 469
>gi|395853581|ref|XP_003799283.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Otolemur
garnettii]
Length = 479
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 157/397 (39%), Positives = 216/397 (54%), Gaps = 91/397 (22%)
Query: 105 CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVY 164
C +R VLDFDFEK CS+SLS++N YACLVCGKY+QGRG KSHAY HS++ HHV+
Sbjct: 125 CFVFTKASRSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVF 184
Query: 165 INLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE 224
+NL T K F+ +P+
Sbjct: 185 LNLHTLK-----------------------------------------------FYCLPD 197
Query: 225 NYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQS 277
NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK F+I Q+
Sbjct: 198 NYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQA 257
Query: 278 NPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDG 336
I+ + FQG + + K++P + ++ +D
Sbjct: 258 -------------------------IVTDVFQGSMRIFTKKLPHPDLPAEEKEQLLHND- 291
Query: 337 GDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE--V 394
++ E++ F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+G T E
Sbjct: 292 --EYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGITEKEYKT 346
Query: 395 VRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKE 454
+ + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+ N++L++Y+
Sbjct: 347 YKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQAV 405
Query: 455 NEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
++ + YDLIANIVHDGKP G YR+ V W
Sbjct: 406 HKN--TTYDLIANIVHDGKPSEGSYRIHVLHHGTGKW 440
>gi|50552960|ref|XP_503890.1| YALI0E13167p [Yarrowia lipolytica]
gi|49649759|emb|CAG79483.1| YALI0E13167p [Yarrowia lipolytica CLIB122]
Length = 440
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 154/400 (38%), Positives = 220/400 (55%), Gaps = 58/400 (14%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDTV+R LDFDFEK CSVSLS NVY CLVCG+Y+QGRG+ SHAY HS+ HHV++N
Sbjct: 12 YLDTVDRSKLDFDFEKVCSVSLSPTNVYCCLVCGRYFQGRGKSSHAYFHSINDDHHVFLN 71
Query: 167 LRTEKVYCLPDGYEINDPSLEDIR--------------------------------HVGL 194
+ T +VY LP+GY+ L+DI+ ++G+
Sbjct: 72 METYEVYVLPEGYKETSRDLDDIKSVANPVYEESQINRLDVDKTSYTLTNKVYRPGYIGI 131
Query: 195 NNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQV 254
NNIK +D+ NV +Q L PLRN+ L+ + +S +V ++R+IW+ R FK V
Sbjct: 132 NNIKHSDYANVVVQLLSHTKPLRNYLLL---HPKSESAIVSALSQISRRIWNPRAFKNHV 188
Query: 255 SPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NTSIIYECFQGELE 313
SPHE + K S+ +F Q++P +F+ WLL H L + K +S+I+ FQG+L
Sbjct: 189 SPHELVNLAEKLSQGKFSANFQADPCQFLVWLLVQTHLGLGGSSKPGSSLIHHIFQGKLN 248
Query: 314 VVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNI 373
E + +E+ G D +++T+ +PFL+L LDLP +FKD
Sbjct: 249 KTTE----------KLSEREVSGKSVFDVKSSKTTCIPFLLLTLDLPAESVFKDGDNDTT 298
Query: 374 IPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRF-TKNNFFVEKNPT 432
+ VPL +LKK+DG T E+ R Y++ LPKY+ILH +RF T + E N T
Sbjct: 299 LEHVPLTRLLKKYDGVTCEELAG---ERNTYQIVSLPKYLILHYKRFSTLPDGTKEYNGT 355
Query: 433 LVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG 472
+VNFP+K L++ Y + L KY+LI NI +G
Sbjct: 356 IVNFPLKGLDMAPY--------TKGLEGKYNLITNITCEG 387
>gi|115398075|ref|XP_001214629.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192820|gb|EAU34520.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 626
Score = 257 bits (657), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 190/529 (35%), Positives = 260/529 (49%), Gaps = 114/529 (21%)
Query: 1 MTKKRKNNGSADEDRHV-----KSVKVVEQSSPSPPRLGFENPLLPLANTYDDDDEEEEY 55
M KR+ S +ED K +V + PR G +PL + E++E
Sbjct: 44 MMSKRQAELSLEEDLSAGSPASKKARVEDDIDEDDPRRG----AVPLQRAPGQEYEQDER 99
Query: 56 GGRGDSGA--KVGQNGRTGEDDD----EDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLD 109
G A + G+ R D+ D DE EDD ++S +E D YLD
Sbjct: 100 RGNDILAAADREGEELREAAQDNGAESSDIDEAEDDRPAIAAPKRQSAPMEGYSDL-YLD 158
Query: 110 TVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRT 169
T+NRQ+LDFDFEK CSVSLSN+NVYACL
Sbjct: 159 TINRQILDFDFEKLCSVSLSNINVYACL-------------------------------- 186
Query: 170 EKVYCLPDGYEINDPSLEDIRHV---------------------------------GLNN 196
KVY LP+GYE+ + SL+DI++V G+NN
Sbjct: 187 -KVYVLPEGYEVKNKSLDDIKYVVDPYYTKEEVNKLDKEVHDAFDLAGNRYRPGFVGMNN 245
Query: 197 IKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSP 256
IK D++NV +Q L V P+RN+FL+ E L RF L RK+W+ + F+ VSP
Sbjct: 246 IKANDYLNVVVQLLAHVYPIRNYFLLHEFPTPGTPQLALRFSTLVRKLWNPKAFRSHVSP 305
Query: 257 HEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK----NTSIIYECFQGEL 312
HE LQ + S KRF + QS+PVEFMSW LN LH L +KK TS+I FQG L
Sbjct: 306 HELLQEIALRSSKRFTLTQQSDPVEFMSWFLNNLHLSLGGSKKPSKTPTSVIQAAFQGHL 365
Query: 313 EVVKEIPKNTISGNDQN-----TEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKD 367
+ E T + QN TE G T + P+L+L LDLPP PLF+
Sbjct: 366 RI--ESQAITAHSDTQNARLVFTESG----------TINSQVTPYLILTLDLPPTPLFQS 413
Query: 368 VMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYR-VTRLPKYMILHMRRFTKNNFF 426
++IIPQVPL +L K++G T +E + R+R+R + LP Y++ H++RF+KN F
Sbjct: 414 ANRESIIPQVPLTTLLNKYNGITASEKL---AHRVRHRLLHPLPPYLLFHIKRFSKNRFV 470
Query: 427 VEKNPTLVNFP-VKNLELKDYIPLPTPK---ENEKLRSKYDLIANIVHD 471
E+NPT+V FP +L++ Y+ P P +E + YDL+ANI+ D
Sbjct: 471 SERNPTIVTFPSTHSLDMSQYVE-PNPDVWPPSEPIY--YDLVANIILD 516
>gi|198420341|ref|XP_002120475.1| PREDICTED: zinc finger (ubiquitin thiolesterase type)-4, partial
[Ciona intestinalis]
gi|93003316|tpd|FAA00241.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 296
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 127/244 (52%), Positives = 158/244 (64%), Gaps = 40/244 (16%)
Query: 99 VEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLE 158
V+ R CPYLDT+NR VLDFDFEK CSVSLS+LNVYACLVCGKY+QGRG+KSHAYTHS+E
Sbjct: 53 VDRSRSCPYLDTINRSVLDFDFEKLCSVSLSHLNVYACLVCGKYFQGRGRKSHAYTHSVE 112
Query: 159 AGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH--------------------------- 191
HHV++NL T K YCLPD Y I D SLEDI +
Sbjct: 113 CNHHVFLNLYTLKFYCLPDNYMIVDSSLEDITYVLNPTFTKKHIKQLLNDSKLMRAYDGT 172
Query: 192 ------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFG 238
VGLNNIK D+ NV +Q+L V PLRN+FL +NY H K P L RFG
Sbjct: 173 TYLPGIVGLNNIKANDYCNVILQALSHVPPLRNYFLREQNYSHIKRPPGDIMILLSQRFG 232
Query: 239 DLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK 298
+L RK+W+ RNFK VSPHE LQ+++ S+KRF+I Q +P++ ++W LN+++ L +K
Sbjct: 233 ELIRKLWNPRNFKAHVSPHEMLQSIVLCSRKRFQITKQGDPLDLLTWFLNSMNVALNGSK 292
Query: 299 KNTS 302
K TS
Sbjct: 293 KRTS 296
>gi|74207475|dbj|BAE39991.1| unnamed protein product [Mus musculus]
Length = 336
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 133/268 (49%), Positives = 162/268 (60%), Gaps = 44/268 (16%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 73 REREADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 128
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 129 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 188
Query: 190 RH---------------------------------VGLNNIKETDFVNVTIQSLMRVTPL 216
+ VGLNNIK D+ N +Q+L V PL
Sbjct: 189 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 248
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 249 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 308
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDLRNT 297
F+I Q + V+F+SW LN LHS L T
Sbjct: 309 TFQITKQGDGVDFLSWFLNALHSALGGT 336
>gi|281212512|gb|EFA86672.1| SAP DNA-binding domain-containing protein [Polysphondylium pallidum
PN500]
Length = 494
Score = 254 bits (649), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 123/260 (47%), Positives = 165/260 (63%), Gaps = 42/260 (16%)
Query: 101 VRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAG 160
RRDCPYLDTVNR VLDFDFEK CSVS NLN+YACLVCGK +QG+ SHA+ H +++
Sbjct: 101 ARRDCPYLDTVNRTVLDFDFEKSCSVSFVNLNIYACLVCGKKFQGKSPGSHAHYHCMQSN 160
Query: 161 HHVYINLRTEKVYCLPDGYEINDPSLEDIRH----------------------------- 191
HHV+INL +K+YCLPD YE+ D SL+DI++
Sbjct: 161 HHVFINLHNQKIYCLPDDYEVVDSSLDDIKYLVNPTFTKEQIALFDKSTKYSRALDGTSY 220
Query: 192 ----VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA 247
+GLNNIK+ ++NV IQSL RV+ +RN+F+ +N ++CKS LV+ FG+L RKIW+
Sbjct: 221 LPGFIGLNNIKKNSYINVVIQSLARVSMIRNYFINQDNLKNCKSALVNNFGELLRKIWNP 280
Query: 248 RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--------RNTKK 299
RNFKG VSPHE ++ V AS RF I +S+P+EF+ W LN+L DL +
Sbjct: 281 RNFKGHVSPHELIRVVQSAS-TRFTISNESDPLEFLQWFLNSLSYDLNVMNGVDTKQQNS 339
Query: 300 NTSIIYECFQGELEVVKEIP 319
N++II + F GE+++ P
Sbjct: 340 NSNIIQQAFSGEIQLTVTPP 359
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 45/67 (67%), Gaps = 8/67 (11%)
Query: 428 EKNPTLVNFPVKNLELKDYIP---LPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQ 484
EK PT+VNFP+KNL+LKDY+ L T K +KY+L++NI H+G+P+ G Y V++
Sbjct: 384 EKEPTIVNFPLKNLDLKDYLSPDVLKTCKS-----TKYNLLSNIKHEGEPDAGNYTVYLH 438
Query: 485 RKSEELW 491
K + W
Sbjct: 439 NKGFDKW 445
>gi|345491244|ref|XP_001607982.2| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Nasonia
vitripennis]
Length = 416
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 139/311 (44%), Positives = 197/311 (63%), Gaps = 20/311 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTRKI 244
+G+NNIK D+ NV +Q+L VTPLR++FL NY K P L+ RFG+L RK+
Sbjct: 75 IGMNNIKANDYCNVILQALSHVTPLRDYFLRESNYSKVKRPPGDSSYQLIQRFGELMRKL 134
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT-KKNTSI 303
W+ RNFK VSPHE LQAV+ SKK+F+ Q +PV+F+SW LN LH L T KK++SI
Sbjct: 135 WNPRNFKVHVSPHEMLQAVVLWSKKKFQFTEQGDPVDFLSWFLNALHLALNGTKKKDSSI 194
Query: 304 IYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPP 362
IY+ F G++ + ++IP + + ++ + ++ TE+ PFL L DLPPP
Sbjct: 195 IYKTFLGQMRIYTRKIPPLELEESQRSELLNT---VEYGETVTES---PFLYLTCDLPPP 248
Query: 363 PLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARM-RYRVTRLPKYMILHMRRFT 421
PLFKD +NIIPQV L+ +L KF+ + E M R+ + LP ++IL+++RFT
Sbjct: 249 PLFKDQHAENIIPQVNLYTLLNKFNAISEKEYKTYKENFMKRFEIRELPPFLILYIKRFT 308
Query: 422 KNNFFVEKNPTLVNFPVKNLELKDYIPLPTPK-ENEKLRSKYDLIANIVHDGKPEGGFYR 480
KN FFVEKNPT+VNFPVKN++ D + TP+ + + Y+L+ANIVHDG+P G Y+
Sbjct: 309 KNTFFVEKNPTIVNFPVKNVDFGDIL---TPEVKAMHPHTNYELVANIVHDGEPSHGTYK 365
Query: 481 VFVQRKSEELW 491
V + K+ W
Sbjct: 366 VHILHKATGQW 376
>gi|294659093|ref|XP_461434.2| DEHA2F25168p [Debaryomyces hansenii CBS767]
gi|202953612|emb|CAG89849.2| DEHA2F25168p [Debaryomyces hansenii CBS767]
Length = 534
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 167/456 (36%), Positives = 236/456 (51%), Gaps = 65/456 (14%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
+T + D +DE+ L Q + D LDT+NR +LDFDFEK CS++LS
Sbjct: 38 KTDSKSEADSSDDEE-LPQYLLQNSPMQDASANDDGFCLDTINRYLLDFDFEKVCSITLS 96
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPS---- 185
N+NVY CLVCGK++QGR + SHAY HS+ A H V+INL T K Y LPD YE+
Sbjct: 97 NVNVYCCLVCGKFFQGRSKSSHAYLHSVNANHRVFINLETAKTYILPDNYELTTQKALKH 156
Query: 186 LEDIR---------------------------------HVGLNNIKETDFVNVTIQSLMR 212
L DI+ +GLNN+ D+ NV Q+L
Sbjct: 157 LSDIKLLLNPVYSKVAIQNLSKKVQIGHDLNHKPYVVGFIGLNNLSANDYANVIFQALSH 216
Query: 213 VTPLRNFFL---IPE----NYRHC-KSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVM 264
+ P+R+F+L IPE N R KS L + FG L RK+W + FKG +SPHE LQ +
Sbjct: 217 IPPIRDFYLSLTIPEKKDLNERIIRKSQLNNLFGLLVRKLWSSYLFKGHISPHELLQYIS 276
Query: 265 KASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEVVKEIPKNTI 323
SKK+F I Q +P FM WLLN LH L ++ K N++I + QG ++ V IP
Sbjct: 277 SVSKKKFGIAEQKSPKAFMVWLLNQLHIQLIKSIKNNSTIFSKSLQGSIQ-VSTIP--IT 333
Query: 324 SGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVM----EKNIIPQVPL 379
+ ++ T K D D +T + F +L LD+P LF+ + + IPQV +
Sbjct: 334 ATTNKLTNKVDFNVQDKDKVTNLSK---FWVLSLDIPGNALFQGTSNQGEQTSQIPQVSI 390
Query: 380 FNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEK-NPTLVNFPV 438
++L+K+DG+T +V R + ++ V LP Y+I H+ R N+ + NPT+V FP
Sbjct: 391 QSLLEKYDGKTTVQVSRAEL-KVYQLVEPLPPYIIFHIDRGLDNDDENSRGNPTVVKFP- 448
Query: 439 KNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKP 474
+ D P NE +R Y LI++I H+ P
Sbjct: 449 ---SVIDMSPYVLNSGNEPIR--YKLISSIKHELIP 479
>gi|359497851|ref|XP_002272213.2| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like, partial
[Vitis vinifera]
Length = 172
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 136/175 (77%), Positives = 149/175 (85%), Gaps = 8/175 (4%)
Query: 264 MKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTI 323
MKASKKRFRIG QS+PVEFMSWLLNTLH DLR +KKN+SIIY CFQGELEVVKEIP
Sbjct: 1 MKASKKRFRIGAQSDPVEFMSWLLNTLHGDLRTSKKNSSIIYNCFQGELEVVKEIPNKGF 60
Query: 324 -----SGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVP 378
+G+DQN + D+H ++ ET RMPFLMLGLDLPPPPLFKDVMEKNIIPQVP
Sbjct: 61 FEKRENGDDQNK---ATTADEHADVILETCRMPFLMLGLDLPPPPLFKDVMEKNIIPQVP 117
Query: 379 LFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTL 433
LFNILKKFDGE VTEVVRP +ARMRYRVTRLP+Y+ILHMRRFTKNNFF+EKNPTL
Sbjct: 118 LFNILKKFDGELVTEVVRPRIARMRYRVTRLPQYLILHMRRFTKNNFFIEKNPTL 172
>gi|150865930|ref|XP_001385345.2| ubiquitin specific protease [Scheffersomyces stipitis CBS 6054]
gi|149387186|gb|ABN67316.2| ubiquitin specific protease [Scheffersomyces stipitis CBS 6054]
Length = 489
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 141/377 (37%), Positives = 207/377 (54%), Gaps = 53/377 (14%)
Query: 101 VRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAG 160
++D YLDT++R +LDFDFEK CSV+LSN NVY CLVCGKY+ GR + S +YTHSLE
Sbjct: 41 AQQDTLYLDTIHRPLLDFDFEKVCSVTLSNTNVYCCLVCGKYFSGRSRTSPSYTHSLENN 100
Query: 161 HHVYINLRTEKVYCLPDGYEIND----PSLEDIR-------------------------- 190
HHV+INL EK Y LP+ YEI SL DI
Sbjct: 101 HHVFINLHNEKYYVLPENYEITSYSALKSLRDINNFLNPKYTKSDIENLPVTARDLDHKS 160
Query: 191 ----HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDL 240
+VGLNNI D+ NV IQ+L + P+RN++L + + SPL + FG L
Sbjct: 161 YDVGYVGLNNISANDYSNVVIQALSHIVPIRNWYLSLSHRQDLNARLESMSPLNYNFGIL 220
Query: 241 TRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKK 299
RK+W ++ VSPHEFLQ + +K +F I QS P + + WLLN LH L ++ KK
Sbjct: 221 VRKLWSKYLYRNHVSPHEFLQYLSSTTKNQFSITRQSTPKKLLVWLLNNLHLQLSKSIKK 280
Query: 300 NTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDL 359
+++++ + +G ++V + +T ND+ E +D +++++ F +L LDL
Sbjct: 281 SSTVLSDNLRGRIKVT-SMEVHTKEVNDK-VEFETDENSAKESVSS------FWVLTLDL 332
Query: 360 PPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRR 419
PLF DV + I +V L +L+K+DG+ ++V + R + LP+Y+I H+ R
Sbjct: 333 ISSPLFMDVTK---IQEVALTKLLQKYDGKQTSQVSSSEL-RTYKLIAPLPRYLIFHIDR 388
Query: 420 FTKNNFFVEKNPTLVNF 436
+ + NPT+V F
Sbjct: 389 GLEKDGSTRGNPTVVQF 405
>gi|448084506|ref|XP_004195622.1| Piso0_005023 [Millerozyma farinosa CBS 7064]
gi|359377044|emb|CCE85427.1| Piso0_005023 [Millerozyma farinosa CBS 7064]
Length = 514
Score = 237 bits (605), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 156/418 (37%), Positives = 227/418 (54%), Gaps = 67/418 (16%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R LDFDFEK CSV+LSN+NVY CLVCG + QGR + S AY HS+ + H +++N
Sbjct: 55 YLDTIDRSKLDFDFEKVCSVTLSNVNVYCCLVCGTFLQGRSKSSPAYLHSINSSHRIFLN 114
Query: 167 LRTEKVYCLPDGYEINDP----SLEDIR-------------------------------- 190
L TEK + LPD YE++ L+DIR
Sbjct: 115 LHTEKFFILPDNYELSSNIVTRHLDDIRLLLNPRYDIRRIKELSTKVFKGYDLRNHAYDV 174
Query: 191 -HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL---IPENYRHC-----KSPLVHRFGDLT 241
+GLNNI+ D+ NVTIQ+L + +R+F+L + EN KS L H F L
Sbjct: 175 GFIGLNNIQNNDYANVTIQALSHIVLIRDFYLSLSLEENQSEHELVSRKSVLNHNFEVLL 234
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT-KKN 300
+K+W FK VSPHEFLQ V + K+F +++P +F+ WLLN LHSDL T +
Sbjct: 235 KKLWSQHLFKNHVSPHEFLQVVSSITSKKFSTTSETSPKDFLVWLLNRLHSDLVKTFSRK 294
Query: 301 TSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLP 360
SI+ + QG +EV+ IP + ++ T K + + +T+ + ML LDLP
Sbjct: 295 RSILSKTLQGNVEVIT-IPIE--AKTNEYTLKVDFSIQEEKKSSKKTN---YWMLSLDLP 348
Query: 361 PPPLFKDVME---KNIIPQVPLFNILKKFDGETVTEVVRPHVARMR-YRVTR-LPKYMIL 415
P PLFK+ + N IPQV +F +LKK++G T+ V+ +R Y++ LP Y+IL
Sbjct: 349 PDPLFKNSVSGKYGNEIPQVSIFELLKKYNG---TQTVQSSSTELRSYKLLEPLPPYIIL 405
Query: 416 HMRRFTKNNFFVEK-NPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG 472
R + ++ NPT+V FP++ ++ +Y+ P+ K Y LI+NI H+
Sbjct: 406 FYDRGIEEPGKSKRGNPTVVKFPLE-IDFSEYLEKPS-----KSPLNYRLISNIKHES 457
>gi|448080029|ref|XP_004194524.1| Piso0_005023 [Millerozyma farinosa CBS 7064]
gi|359375946|emb|CCE86528.1| Piso0_005023 [Millerozyma farinosa CBS 7064]
Length = 514
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 165/474 (34%), Positives = 238/474 (50%), Gaps = 75/474 (15%)
Query: 56 GGRGDSGAKVGQNGRTGEDDDEDKDE-DEDDLANGYGQGQRSRLVEVRRD-CPYLDTVNR 113
RG N +T D + D DE+D + + +RD YLDT++R
Sbjct: 2 SKRGIEDDDSTYNKKTRHDTNTALDNPDENDQTLHDSKASEQTVNNSKRDNTYYLDTIDR 61
Query: 114 QVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVY 173
LDFDFEK CSV+LSN+NVY CLVCG + QGR + S AY HS+ + H +++NL TEK +
Sbjct: 62 SKLDFDFEKVCSVTLSNVNVYCCLVCGTFLQGRSKSSPAYLHSINSSHRMFLNLHTEKFF 121
Query: 174 CLPDGYEINDP----SLEDIR---------------------------------HVGLNN 196
LPD YE++ L+DIR +GLNN
Sbjct: 122 ILPDNYELSSNIVTRHLDDIRLLLNPRYDSRRIKDLSSKVLKGYDLRNHAYDVGFIGLNN 181
Query: 197 IKETDFVNVTIQSLMRVTPLRNFFL--------IPENYRHCKSPLVHRFGDLTRKIWHAR 248
I+ D+ NV I +L + P+R+F+L + KS L H F L +K+W
Sbjct: 182 IQNNDYANVIIHALSHIAPIRDFYLGLSLEKNQTEQELVSRKSVLNHNFEILLKKLWSQH 241
Query: 249 NFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT-KKNTSIIYEC 307
FK VSPHEFLQ V + K+F +++P +F++WLLN LHSDL T + SI+ +
Sbjct: 242 LFKNHVSPHEFLQVVSSITSKKFSTTSETSPKDFLAWLLNRLHSDLVKTFARKRSILSKT 301
Query: 308 FQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKD 367
QG +EV+ IP I D + +++ ++ + ML LDLPP PLFK+
Sbjct: 302 LQGNVEVIT-IP---IEAKTNEYTLKVDFSIQEEKKSSK--KINYWMLSLDLPPDPLFKN 355
Query: 368 VME---KNIIPQVPLFNILKKFDGETVTEVVRPHVARMR-YRVTR-LPKYMILHMRRFT- 421
+ N IPQV +F +LKK+DG+ + V+ +R Y++ LP Y+IL R
Sbjct: 356 SVTGKYGNEIPQVSIFELLKKYDGK---QTVQSTSTELRSYKLLEPLPPYIILFYDRGIE 412
Query: 422 ---KNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG 472
KN NPT+V FP++ ++ Y+ P+ K Y LI+NI H+
Sbjct: 413 EPEKNK---RGNPTVVKFPLE-IDFSQYLEKPS-----KSPLNYRLISNIKHES 457
>gi|190345136|gb|EDK36962.2| hypothetical protein PGUG_01060 [Meyerozyma guilliermondii ATCC
6260]
Length = 487
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 149/407 (36%), Positives = 206/407 (50%), Gaps = 60/407 (14%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
Y+DT+NR +DFDFEK CSVSLS NVY CLVCGKY+QGR S AY HS+E HHV++N
Sbjct: 31 YIDTINRNKIDFDFEKLCSVSLSKSNVYCCLVCGKYFQGRSVSSPAYNHSIEWNHHVFMN 90
Query: 167 LRTEKVYCLPDGYEIN-----------------------------DPSLEDIRH------ 191
L+T K Y LP+ Y++ +PS D+ H
Sbjct: 91 LQTHKTYILPEDYQVTSPKALKHLQDIIYLLNPTYSQQDVARLDTEPSAYDLTHKPYFVG 150
Query: 192 -VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPEN-----YRHCKSPLVHRFGDLTRKIW 245
+GLN I + D+ NV +Q+L + P+R+F L+ N K PLV FG + RKIW
Sbjct: 151 YIGLNKISKNDYSNVIVQALAHIQPIRDFLLLLPNDSLYEVLEHKYPLVSMFGLMVRKIW 210
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSII 304
FK VSPHEFLQ V SKK F I QS+P FM W LN LHS L R K +I+
Sbjct: 211 SRHLFKPHVSPHEFLQLVSLMSKKSFSITHQSSPKHFMVWFLNQLHSQLTRAIGKKRTIL 270
Query: 305 YECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPL 364
+ QGE+ +V IP +D + + + S F L L L P
Sbjct: 271 SKTLQGEI-IVTTIPVVQKQASDSTVQF------ERQESMKKISISKFWHLSLSLGPASA 323
Query: 365 FKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHM-RRFTKN 423
K + +PQV + ++L K+DG T ++ + + + P ++I+H+ R +
Sbjct: 324 LKIQDTNDTVPQVSIESLLSKYDGTTTSQASASELRTYKLKYPG-PPFLIMHIDRNLEEG 382
Query: 424 NFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVH 470
N + NPT+V FP+ L++ YI E E KY L+++I H
Sbjct: 383 N--IRGNPTVVKFPMV-LDMAPYI------EGEIGPQKYQLVSSIKH 420
>gi|363746060|ref|XP_003643514.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like, partial
[Gallus gallus]
Length = 228
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 119/225 (52%), Positives = 143/225 (63%), Gaps = 40/225 (17%)
Query: 115 VLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYC 174
VLDFDFEK CS+SLS++NVYACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YC
Sbjct: 1 VLDFDFEKLCSISLSHINVYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYC 60
Query: 175 LPDGYEINDPSLEDIRH---------------------------------VGLNNIKETD 201
LPD YEI D SLEDI + VGLNNIK D
Sbjct: 61 LPDNYEIIDSSLEDITYVLKPTFTAQQIGNLDKQAKLSRAYDGTTYLPGIVGLNNIKAND 120
Query: 202 FVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQV 254
+ N +Q+L V PLRN+FL +NY++ K P LV RFG+L RK+W+ RNFK V
Sbjct: 121 YANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHV 180
Query: 255 SPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK 299
SPHE LQAV+ SKK F+I Q + V+F+SW LN LHS L TKK
Sbjct: 181 SPHEMLQAVVLCSKKNFQITKQGDGVDFLSWFLNALHSALGGTKK 225
>gi|146423511|ref|XP_001487683.1| hypothetical protein PGUG_01060 [Meyerozyma guilliermondii ATCC
6260]
Length = 487
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 148/407 (36%), Positives = 205/407 (50%), Gaps = 60/407 (14%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
Y+DT+NR +DFDFEK C VSLS NVY CLVCGKY+QGR S AY HS+E HHV++N
Sbjct: 31 YIDTINRNKIDFDFEKLCLVSLSKSNVYCCLVCGKYFQGRSVSSPAYNHSIEWNHHVFMN 90
Query: 167 LRTEKVYCLPDGYEIN-----------------------------DPSLEDIRH------ 191
L+T K Y LP+ Y++ +PS D+ H
Sbjct: 91 LQTHKTYILPEDYQVTSPKALKHLQDIIYLLNPTYSQQDVARLDTEPSAYDLTHKPYFVG 150
Query: 192 -VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPEN-----YRHCKSPLVHRFGDLTRKIW 245
+GLN I + D+ NV +Q+L + P+R+F L+ N K PLV FG + RKIW
Sbjct: 151 YIGLNKISKNDYSNVIVQALAHIQPIRDFLLLLPNDSLYEVLEHKYPLVSMFGLMVRKIW 210
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSII 304
FK VSPHEFLQ V SKK F I QS+P FM W LN LHS L R K +I+
Sbjct: 211 SRHLFKPHVSPHEFLQLVSLMSKKSFSITHQSSPKHFMVWFLNQLHSQLTRAIGKKRTIL 270
Query: 305 YECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPL 364
+ QGE+ +V IP +D + + + S + F L L L P
Sbjct: 271 SKTLQGEI-IVTTIPVVQKQASDSTVQF------ERQESMKKISILKFWHLSLSLGPASA 323
Query: 365 FKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHM-RRFTKN 423
K + +PQV + +L K+DG T ++ + + + P ++I+H+ R +
Sbjct: 324 LKIQDTNDTVPQVSIELLLLKYDGTTTSQASASELRTYKLKYPG-PPFLIMHIDRNLEEG 382
Query: 424 NFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVH 470
N + NPT+V FP+ L++ YI E E KY L+++I H
Sbjct: 383 N--IRGNPTVVKFPMV-LDMAPYI------EGEIGPQKYQLVSSIKH 420
>gi|350582186|ref|XP_003125016.3| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like, partial
[Sus scrofa]
Length = 316
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 125/246 (50%), Positives = 149/246 (60%), Gaps = 49/246 (19%)
Query: 74 DDDEDKD-EDEDDLANGY--GQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSN 130
D DED + E E NG + QRSR CPYLDT+NR VLDFDFEK CS+SLS+
Sbjct: 77 DVDEDSEPEREVRAKNGRLDSEDQRSR------HCPYLDTINRSVLDFDFEKLCSISLSH 130
Query: 131 LNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIR 190
+N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 131 INAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDIT 190
Query: 191 H---------------------------------VGLNNIKETDFVNVTIQSLMRVTPLR 217
+ VGLNNIK D+ N +Q+L V PLR
Sbjct: 191 YVLKPTFTKQQIANLEKQVKFSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLR 250
Query: 218 NFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKR 270
N+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 251 NYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKT 310
Query: 271 FRIGVQ 276
F+I Q
Sbjct: 311 FQITKQ 316
>gi|443719395|gb|ELU09579.1| hypothetical protein CAPTEDRAFT_165273 [Capitella teleta]
Length = 358
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 143/313 (45%), Positives = 198/313 (63%), Gaps = 22/313 (7%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTRKI 244
VG+NNIK D+ NV +Q+L V PLRN+FL ENY K P L RFG+L RK+
Sbjct: 15 VGMNNIKANDYCNVILQALSHVAPLRNYFLQEENYNTIKRPPGDQMFLLARRFGELLRKL 74
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NTSI 303
W+ RNFK VSPHE LQAV+ SKK F+I Q + VEF+SW LN+LH L KK N+SI
Sbjct: 75 WNPRNFKAHVSPHEMLQAVVLCSKKHFQITKQGDSVEFLSWFLNSLHQCLGGNKKVNSSI 134
Query: 304 IYECFQGELEVV-KEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPP 362
+ + F+G + V ++IP + +++ + +++ ET PFL L DLPPP
Sbjct: 135 VSKTFRGSMRVYSRKIPALELREDEKLKLLET---EEYQETCAET---PFLYLTCDLPPP 188
Query: 363 PLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARM-RYRVTRLPKYMILHMRRFT 421
PL+ D +++NIIPQ+P++N+L KF+G + E + M R+ +TRLP ++IL+ +RFT
Sbjct: 189 PLYPDGLQENIIPQIPIYNVLNKFNGISEKEYKTHKDSTMRRFVITRLPPFIILYFKRFT 248
Query: 422 KNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRS-KYDLIANIVHDGKPEGGF-- 478
KN F +EKNPT+VNFPVK + D+ L PK+ K +S YDL+ANIVH+GKP GG
Sbjct: 249 KNTFILEKNPTIVNFPVKGI---DFGELLDPKDRAKHKSTTYDLVANIVHEGKPGGGTGS 305
Query: 479 YRVFVQRKSEELW 491
Y+ + K W
Sbjct: 306 YKCHLLHKGSGKW 318
>gi|221060993|ref|XP_002262066.1| Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger protein
[Plasmodium knowlesi strain H]
gi|193811216|emb|CAQ41944.1| Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger protein,
putative [Plasmodium knowlesi strain H]
Length = 682
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 107/220 (48%), Positives = 142/220 (64%), Gaps = 33/220 (15%)
Query: 105 CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVY 164
CPYL T+NR +LDFDFEK CS+S+SNL+VYACLVCG Y+QG G+ +HAYTH+LE H+V+
Sbjct: 83 CPYLRTINRNLLDFDFEKLCSISMSNLHVYACLVCGVYFQGIGKGTHAYTHALEKNHYVF 142
Query: 165 INLRTEKVYCLPDGYEINDPSLEDIRH--------------------------------- 191
INL T K CLP+ YEI D SL DI++
Sbjct: 143 INLETCKTCCLPENYEIEDASLNDIKYFLKPTYSRDQVEYICRNSILGKSLDGADFFPGF 202
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
VGLNN+K TD+ NV IQ + + PLRNFFL+ EN ++ +V +L +KI++ RNFK
Sbjct: 203 VGLNNLKHTDYCNVIIQLVCSIIPLRNFFLVFENKKYVSKNIVSSLSELIKKIFNPRNFK 262
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH 291
G VSPHEFLQ V SKK F+IG +++P++F WL++ +H
Sbjct: 263 GVVSPHEFLQTVGIESKKTFKIGSKNDPLDFFLWLISKIH 302
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 107/175 (61%), Gaps = 9/175 (5%)
Query: 320 KNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPL 379
+N +S +D++ DG + ++ T ++PF L L LP PP+FK E NIIPQV +
Sbjct: 476 ENDMSNSDEDDTDLQDGEELNEEKNYVTEKIPFRTLSLKLPNPPIFKSTTESNIIPQVSI 535
Query: 380 FNILKKFDGET---VTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNF 436
F +L KFDGET + E P + ++LPKY++ ++RF+KNNFFVEKN T+VNF
Sbjct: 536 FELLTKFDGETESFLNEKSEPSTLIL----SKLPKYLVFTIKRFSKNNFFVEKNGTIVNF 591
Query: 437 PVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+KNL++KDYI ++N +KY+LIANI H G G Y++ V ++ W
Sbjct: 592 VIKNLDMKDYIHEDYLEKNP--VTKYNLIANIFHSGSVNNGTYKIHVLNQASNEW 644
>gi|164661019|ref|XP_001731632.1| hypothetical protein MGL_0900 [Malassezia globosa CBS 7966]
gi|159105533|gb|EDP44418.1| hypothetical protein MGL_0900 [Malassezia globosa CBS 7966]
Length = 376
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 128/299 (42%), Positives = 172/299 (57%), Gaps = 32/299 (10%)
Query: 203 VNVTIQSLMRVTPLRNFFLIPENYRHCKSP---------LVHRFGDLTRKIWHARNFKGQ 253
+NV IQ+L V PLRN+FL N S LV RF L R++W+ R FK Q
Sbjct: 1 MNVVIQALAHVPPLRNYFLQSGNGDASASASDTLPQSTELVRRFATLIRRLWNPRAFKSQ 60
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL----RNTKKNTSIIYECFQ 309
VSPHEFLQ V +AS+ RFR+ +PVEF+ WLLN LH DL +K SII ECF+
Sbjct: 61 VSPHEFLQEVTEASQGRFRLTEPCDPVEFLGWLLNRLHMDLVGSGSKARKQPSIITECFR 120
Query: 310 GEL--EVVKEIPKNTISGNDQNTEK-----GSDGGDDHDNI---------TTETSRMPFL 353
G L E K I + + +D G G D + ++PFL
Sbjct: 121 GALRLESQKVIVRTGLEDDDDLVVDKLDHDGRRAGGQQDEFGHAKFNIDKAIKVDQVPFL 180
Query: 354 MLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYM 413
+L +DLPP P+F+DV+ NIIPQVP+ ++L K+DG T+ E H R+++TRLP Y+
Sbjct: 181 LLAIDLPPLPVFQDVVADNIIPQVPIAHLLAKYDGTTIQE---SHGLIRRHKITRLPPYL 237
Query: 414 ILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG 472
I+H RRFT N F E+N T+VNFP L+L+DY+ P E+ +L S Y+L+ANI H+
Sbjct: 238 IIHFRRFTHNRFVDERNTTIVNFPPVGLQLQDYVDAPELNESPRLGSVYNLLANITHEA 296
>gi|209875567|ref|XP_002139226.1| ubiquitin carboxyl-terminal hydrolase family protein
[Cryptosporidium muris RN66]
gi|209554832|gb|EEA04877.1| ubiquitin carboxyl-terminal hydrolase family protein
[Cryptosporidium muris RN66]
Length = 469
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 146/453 (32%), Positives = 225/453 (49%), Gaps = 78/453 (17%)
Query: 101 VRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAG 160
+ + CP+L T+NR VLDFD EK CSV+L N +VY CLVCG +QGRG+ S AY H+LE
Sbjct: 1 MEKKCPFLSTINRGVLDFDHEKLCSVTLRNEHVYCCLVCGTNFQGRGKGSIAYCHALEMS 60
Query: 161 HHVYINLRTEKVYCLPDGYEINDPSLEDIR------------------------------ 190
HH++INL T ++YCLPD YE+ + SL+DI+
Sbjct: 61 HHMFINLHTSRIYCLPDNYEVKEHSLDDIKQYLQPKFDKKLISILDKNCKTYDGSEYIPG 120
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLI-----PENYRHC-KSP---LVHRFGDLT 241
++GL N +TD +NV I L R+ PLR+FFL EN++ K P L+ ++
Sbjct: 121 YIGLYNFGKTDALNVVILLLSRIIPLRDFFLYFPIYDSENFQKISKVPLDKLMFSIIEIV 180
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGV----QSN----------PVEFMSWLL 287
KI++ NFKG SP + + S + QSN P+ +SW++
Sbjct: 181 CKIFNPYNFKGMASPFVLANTIERKSNSLLPVSTNTEKQSNKTSQDTQFVDPMALLSWII 240
Query: 288 NTLHSDLRNTKKNTSIIYECF-QGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTE 346
+ + L K CF Q ++ K I + I G N K + N++ +
Sbjct: 241 HYMKKKLSKIKLGYQ---RCFYQDKMSKSKNIIASCIEGQVLNCTKINGIEPKSLNLSYD 297
Query: 347 TSRM-------PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILK-KFDGETVTEVVRPH 398
+ + F+ L L++P P + ++ IPQ+ +F++L+ KF + T
Sbjct: 298 SMKSVHGSTVNSFISLSLNIPLPSVLNPSLDSR-IPQIAIFDLLQNKFLENSST------ 350
Query: 399 VARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKL 458
++ LP Y+I+H +RF+ +F +EKNPT+++FP+KNL+L Y+ N
Sbjct: 351 ----FQKIWLLPCYLIVHFKRFSMESFGLEKNPTIISFPIKNLDLLPYVHPDNLHANP-- 404
Query: 459 RSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+KYDLIANI H G + G + + + W
Sbjct: 405 NTKYDLIANIAHKGDTKSGVFTIQMYHSGRNEW 437
>gi|156102809|ref|XP_001617097.1| ubiquitin carboxyl-terminal hydrolase [Plasmodium vivax Sal-1]
gi|148805971|gb|EDL47370.1| ubiquitin carboxyl-terminal hydrolase, putative [Plasmodium vivax]
Length = 685
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 104/220 (47%), Positives = 141/220 (64%), Gaps = 33/220 (15%)
Query: 105 CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVY 164
CPYL T+NR +LDFDFEK CS+S+SNL+VYACLVCG Y+QG G+ ++AYTH+LE H+V+
Sbjct: 91 CPYLRTINRNLLDFDFEKLCSISMSNLHVYACLVCGMYFQGIGKGTYAYTHALEKNHYVF 150
Query: 165 INLRTEKVYCLPDGYEINDPSLEDIRH--------------------------------- 191
INL + K CLP+ YEI D SL DI++
Sbjct: 151 INLESCKTCCLPENYEIEDASLNDIKYFLKPMYTVEQVEYICRNSILGKSLDGADFFPGF 210
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
VGLNN+K TD+ NV IQ + + PLRNFFL+ E ++ ++ +L +KI++ RNFK
Sbjct: 211 VGLNNLKHTDYCNVIIQLVCSIIPLRNFFLVFETKKYMAKNIISSLSELIKKIYNPRNFK 270
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH 291
G VSPHEFLQ V SKK F+IG Q++P++F WL++ +H
Sbjct: 271 GVVSPHEFLQTVGIESKKNFKIGSQNDPLDFFLWLISKIH 310
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 94/148 (63%), Gaps = 9/148 (6%)
Query: 347 TSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGET---VTEVVRPHVARMR 403
T ++PF L L LP PP+FK E NIIPQV +F +L KFDGET + E P
Sbjct: 506 TEKIPFRTLSLKLPNPPIFKSTTESNIIPQVSIFELLTKFDGETESFLNEKSEPSTLI-- 563
Query: 404 YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYD 463
+++LPKY++ ++RF++NNFFVEKN T+VNF +KNL++KDY+ ++N +KY+
Sbjct: 564 --ISKLPKYLVFTIKRFSRNNFFVEKNGTIVNFVIKNLDMKDYVHEDYLEKNP--VTKYN 619
Query: 464 LIANIVHDGKPEGGFYRVFVQRKSEELW 491
LIANI H G G Y++ V ++ W
Sbjct: 620 LIANIFHSGSVSSGTYKIHVLNQASNEW 647
>gi|124513102|ref|XP_001349907.1| Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger protein
[Plasmodium falciparum 3D7]
gi|23615324|emb|CAD52315.1| Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger protein
[Plasmodium falciparum 3D7]
Length = 640
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 110/233 (47%), Positives = 145/233 (62%), Gaps = 35/233 (15%)
Query: 94 QRSRLVEVRRD--CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSH 151
Q++ L+ +R+ CPYL T+NR +LDFDFEK CS+SLSNL+VYACLVCG Y+QG G+ +H
Sbjct: 75 QKNNLLYKKRNRVCPYLRTINRNLLDFDFEKLCSISLSNLHVYACLVCGLYFQGIGKGTH 134
Query: 152 AYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH-------------------- 191
AYTHSLE H+V+INL T K C+P+GYEI D SL DI++
Sbjct: 135 AYTHSLEKNHYVFINLETCKTCCIPEGYEIVDASLNDIKYFLKPTYNKEQVEHLCYNSVL 194
Query: 192 -------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFG 238
VGLNN+K TD+ NV IQ + + PLRN L+ E + ++
Sbjct: 195 GKSLDGGDFLPGLVGLNNLKNTDYCNVIIQLICSIIPLRNTLLLYECKENIAKNIIVVLS 254
Query: 239 DLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH 291
DL +KI++ RNFKG VSPHEFLQAV S K F+IG + P++F WLLN ++
Sbjct: 255 DLIKKIYNPRNFKGVVSPHEFLQAVGIESNKNFKIGTKKYPLDFFLWLLNKIY 307
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/143 (44%), Positives = 87/143 (60%), Gaps = 2/143 (1%)
Query: 349 RMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTR 408
++PF L L LP P+FK E NIIPQV +F +L KFDGET T + +++
Sbjct: 463 KIPFRTLSLKLPNAPVFKSTTESNIIPQVSIFELLSKFDGETETFLQEHFKIPNTLIISK 522
Query: 409 LPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANI 468
LPKY+I + RF+KNNFF+EKN T+VNF +KNL++KDY+ N +KY+LIANI
Sbjct: 523 LPKYLIFTIERFSKNNFFIEKNGTIVNFVIKNLDMKDYVHEDFLSLNP--VTKYNLIANI 580
Query: 469 VHDGKPEGGFYRVFVQRKSEELW 491
H G G Y++ V + W
Sbjct: 581 FHTGTVNQGSYKIHVLNQPTNEW 603
>gi|83318021|ref|XP_731414.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23491448|gb|EAA22979.1| Arabidopsis thaliana At4g22410/F7K2_7-related [Plasmodium yoelii
yoelii]
Length = 640
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 119/275 (43%), Positives = 163/275 (59%), Gaps = 36/275 (13%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYL T+NR +LDFDFEK CS+SLSNL+VYACLVCG Y+QG G+ ++AYTH+LE H+
Sbjct: 86 RVCPYLRTINRNLLDFDFEKLCSISLSNLHVYACLVCGIYFQGIGRGTYAYTHALEKNHY 145
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRH------------------------------- 191
V+INL T K C+P+ YEI+D SL DI++
Sbjct: 146 VFINLETCKTCCIPENYEIHDASLNDIKYFLKPVYNKEQVEHLCNNLILGKSLDGADFFP 205
Query: 192 --VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARN 249
VGLNN+K TD+ NV IQ L + PLRN L+ E+ ++ L+ +L +KI++ +N
Sbjct: 206 GCVGLNNLKHTDYCNVIIQLLCCIVPLRNMLLLYESKQNIAKNLIVVLAELLKKIYNPKN 265
Query: 250 FKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL--HSDLRNTKKNTSIIYEC 307
FKG VSPHEFLQAV SKK F+IG +++P+ F W++N + HS+ + KK +I +
Sbjct: 266 FKGVVSPHEFLQAVGIESKKNFKIGTKNDPLNFFLWIINKIHRHSEKKLQKKKKNIPNQA 325
Query: 308 F-QGELEVVKEIPKNTISGNDQNTEKGSDGGDDHD 341
Q L I KN ND+ + + DHD
Sbjct: 326 NKQNNLIANNNISKNAHPKNDEGEKNYTSTKKDHD 360
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 111/210 (52%), Gaps = 23/210 (10%)
Query: 302 SIIYECFQGELEVVKEIPK--------------------NTISGNDQNTEKGSDGGDDHD 341
+II CF GEL + + K N I+ N + + D + +
Sbjct: 396 NIIDYCFDGELIIKTKKTKDDMTEEGTHYDGKNDTTGSTNYIAHNQNDNSQYEDDNEFSE 455
Query: 342 NITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVAR 401
N + PF L L LP PP+FK E NIIPQV +F +L K+DGET T +
Sbjct: 456 NKNYIFKKTPFRTLSLKLPNPPIFKSTTESNIIPQVSIFELLTKYDGETET-FLSDKATP 514
Query: 402 MRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSK 461
+++LPKY+I ++RF+KNNFF EKN T+VNF +KNL++KDY+ +N +K
Sbjct: 515 STLIISKLPKYLIFTIQRFSKNNFFTEKNGTIVNFVIKNLDMKDYVHQDYLDQNP--VTK 572
Query: 462 YDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+L+ANI H G G Y++ V +++ W
Sbjct: 573 YNLVANIFHSGTVTNGSYKIHVLQQATNEW 602
>gi|406604319|emb|CCH44221.1| U4/U6.U5 tri-snRNP-associated protein [Wickerhamomyces ciferrii]
Length = 433
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 138/402 (34%), Positives = 202/402 (50%), Gaps = 79/402 (19%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R+ LDFDFEK CSVSL+N+N+Y CL CGKY+QGR S A+ HS+ HHV+IN
Sbjct: 21 YLDTIDRKKLDFDFEKICSVSLNNINIYGCLTCGKYFQGRSPNSVAFNHSILENHHVFIN 80
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRH---------------------------------VG 193
KVY LP+ YE+ SL DI++ VG
Sbjct: 81 FNNFKVYILPENYEVKSNSLNDIKYQILPSYTQEDLKKFNDPGFKARDLNGNEYVPGYVG 140
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
LNN+K D+ NV +QS+ V+ +R+ L+ + K L RF L +K+W ++ FK
Sbjct: 141 LNNMKNNDYSNVILQSISHVSLIRDKLLLS-SLDSYKDELNKRFIILVKKLWSSKLFKNH 199
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELE 313
+SPHE LQ + S K F I Q +P +F+ W LNTL+ ++ N SI+ + QG++
Sbjct: 200 ISPHELLQYISILSNKSFGINEQKDPKDFLIWFLNTLNKTFKSD--NDSILSKAIQGKIL 257
Query: 314 VVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNI 373
+ + P G + +ITT+ F +L L+LP P KD
Sbjct: 258 IQNQKP----------------GSKEFKDITTK-----FWLLNLELPTVPFLKDSKGIQQ 296
Query: 374 IPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNF-----FVE 428
I QV L +L + +T E + + +Y++ +LPK++IL+ RF E
Sbjct: 297 IQQVKLSKLLDVY--KTQEEQLLSNGEIRKYKILKLPKFLILNFNRFKDQKLDLKLSLKE 354
Query: 429 KNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVH 470
+N TLV FP+ E E L KY LI+N+++
Sbjct: 355 RNQTLVEFPL---------------EMEFLGFKYKLISNVIN 381
>gi|68075081|ref|XP_679457.1| Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger protein
[Plasmodium berghei strain ANKA]
gi|56500209|emb|CAH98685.1| Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger protein,
putative [Plasmodium berghei]
Length = 634
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 105/222 (47%), Positives = 142/222 (63%), Gaps = 33/222 (14%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYL T+NR +LDFDFEK CS+SLSNL+VYACLVCG Y+QG G+ ++AYTH+LE H+
Sbjct: 86 RVCPYLRTINRNLLDFDFEKLCSISLSNLHVYACLVCGLYFQGIGRGTYAYTHALEKNHY 145
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRH------------------------------- 191
V+INL T K C+P+ YEI+D SL DI++
Sbjct: 146 VFINLETCKTCCIPENYEIHDASLNDIKYFLKPVYNKEQVEHLCNNLILGKSLDGADFFP 205
Query: 192 --VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARN 249
VGLNN+K TD+ NV IQ L + PLRN L+ E+ ++ L+ +L +KI++ +N
Sbjct: 206 GCVGLNNLKHTDYCNVIIQLLCCIVPLRNMLLLYESKQNIAKNLIVVLAELLKKIYNPKN 265
Query: 250 FKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH 291
FKG VSPHEFLQAV SKK F+IG +++P+ F W++N +H
Sbjct: 266 FKGVVSPHEFLQAVGIESKKNFKIGTKNDPLNFFLWIINKIH 307
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 112/213 (52%), Gaps = 25/213 (11%)
Query: 301 TSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTET------------- 347
T+II CF GEL + + K+ I+ + E +D + I
Sbjct: 387 TNIIDYCFDGELIIKTKKTKDDITEEGTSYEGKNDTTGRTNYIAHNQNDNNNNQYEDDNE 446
Query: 348 ---------SRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPH 398
+ PF L L LP PP+FK E NIIPQV +F +L K+DGET T +
Sbjct: 447 FSENKKYIFKKTPFRTLSLKLPNPPIFKSTTESNIIPQVSIFELLTKYDGETETFLSDKA 506
Query: 399 VARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKL 458
+ +++LPKY+I ++RF+KNNFF EKN T+VNF +KNL++KDY+ +N
Sbjct: 507 IPSTLI-ISKLPKYLIFTIQRFSKNNFFTEKNGTIVNFVIKNLDMKDYVHQDYLDQNP-- 563
Query: 459 RSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+KY+L+ANI H G G Y++ V +++ W
Sbjct: 564 VTKYNLVANIFHSGTVTNGSYKIHVLQQATNEW 596
>gi|308809297|ref|XP_003081958.1| putative U4/U6.U5 tri-snRNP-associated (ISS) [Ostreococcus tauri]
gi|116060425|emb|CAL55761.1| putative U4/U6.U5 tri-snRNP-associated (ISS) [Ostreococcus tauri]
Length = 308
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 127/312 (40%), Positives = 176/312 (56%), Gaps = 59/312 (18%)
Query: 203 VNVTIQSLMRVTPLRNFFLIPE----NYR--HCKSPLVHRFGDLTRKIWHARNFKGQVSP 256
+N +Q+L RV PLR L+ E N R H ++ L +L +K+W+A+NFKG SP
Sbjct: 1 MNAVVQALARVGPLRRALLLREEDELNARRGHHQTSLFSALANLMKKMWNAKNFKGHSSP 60
Query: 257 HEFLQAVMKASKKRF-------RIGVQSNPVEFMSWLLNTL-HSDLRNTKKN-------T 301
HEFLQAV K SK+ F + + ++F+ W+LN L + ++ KN +
Sbjct: 61 HEFLQAVRKQSKEMFGGVKASKTAATRPDAMQFLRWMLNELIREEKKDIAKNASLSGDIS 120
Query: 302 SIIYECFQGELEVVKE-IPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLP 360
S++ CFQGE+E+V E P S + T K FLML +DLP
Sbjct: 121 SVVEACFQGEVEIVPEGDPDLAASSAPRKTSK-------------------FLMLSMDLP 161
Query: 361 PPPLFKDVMEKNIIPQVPL-FNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRR 419
PLF+DVMEK IIPQV L +LKKFDG ++R+T+LP+Y+I+ R
Sbjct: 162 AAPLFQDVMEKKIIPQVSLERQLLKKFDG-------------TKFRITKLPEYLIVTYSR 208
Query: 420 FTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFY 479
FTKNNFFVEKNPT+V FP + L + D++P+ ++ K + YDLIANIVHDG P+ G Y
Sbjct: 209 FTKNNFFVEKNPTIVTFPTRGLNIADHVPI----DDVKGSTTYDLIANIVHDGTPDEGSY 264
Query: 480 RVFVQRKSEELW 491
R V S++ W
Sbjct: 265 RSMVYHASDKNW 276
>gi|410035308|ref|XP_003949874.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Pan
troglodytes]
gi|11493496|gb|AAG35521.1|AF130117_55 PRO2855 [Homo sapiens]
gi|90085477|dbj|BAE91479.1| unnamed protein product [Macaca fascicularis]
gi|119619897|gb|EAW99491.1| ubiquitin specific peptidase 39, isoform CRA_b [Homo sapiens]
gi|193786396|dbj|BAG51679.1| unnamed protein product [Homo sapiens]
gi|343958404|dbj|BAK63057.1| U4/U6.U5 tri-snRNP-associated protein 2 [Pan troglodytes]
Length = 296
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/263 (45%), Positives = 168/263 (63%), Gaps = 13/263 (4%)
Query: 233 LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHS 292
LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK F+I Q + V+F+SW LN LHS
Sbjct: 4 LVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHS 63
Query: 293 DL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM 350
L KK +I+ + FQG + + K++P + ++ + D++ E++
Sbjct: 64 ALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEK---EQLLHNDEYQETMVEST-- 118
Query: 351 PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE--VVRPHVARMRYRVTR 408
F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+G T E + + + R+++T+
Sbjct: 119 -FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGITEKEYKTYKENFLK-RFQLTK 176
Query: 409 LPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANI 468
LP Y+I ++RFTKNNFFVEKNPT+VNFP+ N++L++Y+ ++ + YDLIANI
Sbjct: 177 LPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQAVHK--NTTYDLIANI 234
Query: 469 VHDGKPEGGFYRVFVQRKSEELW 491
VHDGKP G YR+ V W
Sbjct: 235 VHDGKPSEGSYRIHVLHHGTGKW 257
>gi|193785997|dbj|BAG50973.1| unnamed protein product [Homo sapiens]
Length = 296
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 119/263 (45%), Positives = 168/263 (63%), Gaps = 13/263 (4%)
Query: 233 LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHS 292
LV RFG+L RK+W+ RNF+ VSPHE LQAV+ SKK F+I Q + V+F+SW LN LHS
Sbjct: 4 LVQRFGELMRKLWNPRNFRAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHS 63
Query: 293 DL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM 350
L KK +I+ + FQG + + K++P + ++ + D++ E++
Sbjct: 64 ALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEK---EQLLHNDEYQETMVEST-- 118
Query: 351 PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE--VVRPHVARMRYRVTR 408
F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+G T E + + + R+++T+
Sbjct: 119 -FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGITEKEYKTYKENFLK-RFQLTK 176
Query: 409 LPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANI 468
LP Y+I ++RFTKNNFFVEKNPT+VNFP+ N++L++Y+ ++ + YDLIANI
Sbjct: 177 LPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQAVHK--NTTYDLIANI 234
Query: 469 VHDGKPEGGFYRVFVQRKSEELW 491
VHDGKP G YR+ V W
Sbjct: 235 VHDGKPSEGSYRIHVLHHGTGKW 257
>gi|429328896|gb|AFZ80655.1| ubiquitin carboxyl-terminal hydrolase, putative [Babesia equi]
Length = 395
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 110/251 (43%), Positives = 150/251 (59%), Gaps = 39/251 (15%)
Query: 88 NGYGQGQ---RSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQ 144
NG G + S+ ++ +CPYL T+NR +LDFDFEK CS+SLSN +VYACL+CGKY+Q
Sbjct: 137 NGVGDKKIEKNSQTADIPVNCPYLGTINRHLLDFDFEKICSISLSNKHVYACLICGKYFQ 196
Query: 145 GRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH------------- 191
GRG+ +H YTH+LE GH++++NL VYCLP+ Y ++D SL DI+
Sbjct: 197 GRGKNTHCYTHALEEGHYLFMNLEDCTVYCLPENYRVDDASLNDIKDFLKPKFTKSDVEK 256
Query: 192 --------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR-HCK 230
+GLNN+K TDF NV IQ + PLRN L+ + R
Sbjct: 257 ISKEVLYGKALDGTDFIPGCIGLNNLKNTDFFNVIIQMFCCIVPLRNKLLLMDVERVQPP 316
Query: 231 SPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL 290
++ +L RK ++ NFKG VSPHEFLQAV +S ++IG+Q +PV +SWLLN L
Sbjct: 317 DAVLSTLVELVRKNFNPHNFKGIVSPHEFLQAVGVSSSGLYKIGIQGDPVALLSWLLNRL 376
Query: 291 HSDLRNTKKNT 301
H +R KK+T
Sbjct: 377 H--VRLHKKHT 385
>gi|167388869|ref|XP_001738726.1| pre-mRNA-splicing factor SAD1 [Entamoeba dispar SAW760]
gi|165897895|gb|EDR24939.1| pre-mRNA-splicing factor SAD1, putative [Entamoeba dispar SAW760]
Length = 427
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 134/430 (31%), Positives = 210/430 (48%), Gaps = 87/430 (20%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGH 161
R CPY++TV+R ++DFD EK C +L +Y C++CGKYYQGR S AY HSLE H
Sbjct: 15 RAYCPYVETVDRNLIDFDKEKVCCKTLKTNQIYCCMICGKYYQGRDVGSPAYVHSLEENH 74
Query: 162 HVYINLRTEKVYCLPDGYEINDPSLEDIRH------------------------------ 191
H++++L T++ + LP G E+ +PS +DI +
Sbjct: 75 HIFLSLNTKQFFNLPHGNEVIEPSFKDIINALDPVYTSNDISHLDDENKVIQLKDHFNKK 134
Query: 192 -----VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-----LVHRFGDLT 241
+G NN+ TD +N +QS+ +RN L E S L+ R L
Sbjct: 135 YIIGFIGFNNLGRTDSINCLVQSIGHCKEIRNLLLSYEEIEKISSKARCGELIKRVSMLI 194
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNT 301
RK W+ K +SP+E + + + KK F I Q + +EF + +N L
Sbjct: 195 RKQWNPTLIKSVISPYELMSELNRL-KKSFSIEKQEDLIEFYMFFINALLP--------- 244
Query: 302 SIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPP 361
+ + FQG++++ E+G H + + LDLPP
Sbjct: 245 --LTQSFQGQIQI----------------EEGKKKYIKH-----------CICIPLDLPP 275
Query: 362 PPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFT 421
PL+ D M++ IIPQ+ L +ILKK+DG+T T + + V +Y + +LPKY+ ++RF
Sbjct: 276 MPLYPDQMKEKIIPQLLLKDILKKYDGKTETLIGKRSV---KYLIKKLPKYLTFVIKRFE 332
Query: 422 KNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRV 481
+N F +KN T+V F L++ DY+ + K+ ++ Y L++ I HDG E G Y
Sbjct: 333 RNTFQGDKNITVVEFE-DTLDMSDYVVNDSIKQ----QTNYHLVSAIKHDGGIEDGTYSS 387
Query: 482 FVQRKSEELW 491
F+ +S + W
Sbjct: 388 FLYHQSLKKW 397
>gi|4680681|gb|AAD27730.1|AF132955_1 CGI-21 protein [Homo sapiens]
Length = 324
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 118/257 (45%), Positives = 162/257 (63%), Gaps = 18/257 (7%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTRKI 244
VGLNNIK D+ N +Q+L V PLRN+FL +NY++ K P LV RFG+L RK+
Sbjct: 64 VGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKL 123
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSI 303
W+ RNFK VSPHE LQAV+ SKK F+I Q + V+F+SW LN LHS L KK +I
Sbjct: 124 WNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTI 183
Query: 304 IYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPP 362
+ + FQG + + K++P + ++ + D++ E++ F+ L LDLP
Sbjct: 184 VTDVFQGSMRIFTKKLPHPDLPAEEK---EQLLHNDEYQETMVEST---FMYLTLDLPTA 237
Query: 363 PLFKDVMEKNIIPQVPLFNILKKFDGETVTE--VVRPHVARMRYRVTRLPKYMILHMRRF 420
PL+KD E+ IIPQVPLFNIL KF+G T E + + + R+++T+LP Y+I ++ F
Sbjct: 238 PLYKDEKEQLIIPQVPLFNILAKFNGITEKEYKTYKENFLK-RFQLTKLPPYLIFCIKIF 296
Query: 421 TKNNFFVEKNPTLVNFP 437
TKNNFFVEKNPT FP
Sbjct: 297 TKNNFFVEKNPTSCQFP 313
>gi|238491730|ref|XP_002377102.1| snRNP assembly factor, putative [Aspergillus flavus NRRL3357]
gi|220697515|gb|EED53856.1| snRNP assembly factor, putative [Aspergillus flavus NRRL3357]
Length = 509
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 137/370 (37%), Positives = 198/370 (53%), Gaps = 87/370 (23%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+NR++LDFDFEK CSV+LSN+NVYACLVCGKY+QGRG KSHAY H LE GHHV+IN
Sbjct: 111 YLDTINREILDFDFEKLCSVTLSNINVYACLVCGKYFQGRGPKSHAYFHGLEVGHHVFIN 170
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY 226
+ T+KVY LP+GYE+ + SL+DI++V + + + + +
Sbjct: 171 MGTKKVYVLPEGYEVKNKSLDDIKYVVDPHYSKEEVSKLDKE------------------ 212
Query: 227 RHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWL 286
VH DL + + K +P +QA + RI Q+
Sbjct: 213 -------VHDAFDLAGNRYRPGSKKPSKTPTSVVQAAFQG---HLRIESQA--------- 253
Query: 287 LNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTE 346
T HSD +N + +++ TE G +I ++
Sbjct: 254 -ITAHSDTQNAR----LVF------------------------TESG--------DIKSQ 276
Query: 347 TSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYR- 405
T+ PFL+L LDLPP PLF+ ++IIP VPL +L K++G T +E + R+R+R
Sbjct: 277 TT--PFLILTLDLPPTPLFQSANRESIIPHVPLTTLLNKYNGITASEKL---AHRVRHRL 331
Query: 406 VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPV-KNLELKDYI---PLPTPKENEKLRSK 461
+ LP Y++ H++RF+KN F E+NPT+V FP ++L++ Y+ P P L
Sbjct: 332 LHPLPPYLLFHIKRFSKNRFVSERNPTIVTFPSPRSLDMSPYVEPNPDIWPPGEPIL--- 388
Query: 462 YDLIANIVHD 471
YDL+ANI+ D
Sbjct: 389 YDLVANIILD 398
>gi|389586106|dbj|GAB68835.1| ubiquitin carboxyl-terminal hydrolase, partial [Plasmodium
cynomolgi strain B]
Length = 287
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 99/204 (48%), Positives = 129/204 (63%), Gaps = 33/204 (16%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYL T+NR +LDFDFEK CS+S+SNL+VYACLVCG Y+QG G+ ++AYTH+LE H+
Sbjct: 84 RVCPYLRTINRNLLDFDFEKLCSISMSNLHVYACLVCGLYFQGIGKGTYAYTHALEKNHY 143
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRH------------------------------- 191
V+INL T K CLP+ YEI D SL DI++
Sbjct: 144 VFINLETCKTCCLPENYEIEDASLNDIKYFLKPMYTIQQVEYICRNSILGKSLDGADFFP 203
Query: 192 --VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARN 249
VGLNN+K TD+ NV IQ + + PLRN+FLI +N ++ ++ +L +KI++ RN
Sbjct: 204 GFVGLNNLKNTDYCNVIIQLVCSIIPLRNYFLIFQNKKYMTKNIISSLSELIKKIFNPRN 263
Query: 250 FKGQVSPHEFLQAVMKASKKRFRI 273
FKG VSPHEFLQ V SKK F+I
Sbjct: 264 FKGVVSPHEFLQTVGIESKKNFKI 287
>gi|449269014|gb|EMC79824.1| U4/U6.U5 tri-snRNP-associated protein 2 [Columba livia]
Length = 395
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 133/340 (39%), Positives = 182/340 (53%), Gaps = 60/340 (17%)
Query: 146 RGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNV 205
RG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI + L + + F
Sbjct: 21 RGLKSHAYIHSVQLSHHVFLNLHTLKFYCLPDNYEIIDSSLEDIT-ISLQYVLKPTFTAQ 79
Query: 206 TIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMK 265
I +L R R P HR A
Sbjct: 80 QIANLDR------------QVRWHHVPAGHR------------------------GAQQH 103
Query: 266 ASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK-KNTSIIYECFQGELEV-VKEIPKNTI 323
S++ + + VEF+SW LN LHS L TK K +I+ + FQG + + K++P +
Sbjct: 104 QSQRLRQRRAAGDGVEFLSWFLNALHSALGGTKRKKKTIVTDVFQGSMRIFTKKLPHPDL 163
Query: 324 SGND-----QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVP 378
+ QN E + + E++ F+ L LDLP PL+KD E+ IIPQVP
Sbjct: 164 PAEEKAQLLQNAE--------YQEMMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVP 212
Query: 379 LFNILKKFDGETVTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNF 436
LF+IL KF+G T E + + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNF
Sbjct: 213 LFSILAKFNGVTEKEYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNF 271
Query: 437 PVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG 476
P+ N++L++Y L + + YDLIANIVHDGKP G
Sbjct: 272 PITNVDLREY--LSEEVQAAHANTTYDLIANIVHDGKPSG 309
>gi|67484272|ref|XP_657356.1| ubiquitin carboxyl-terminal hydrolase domain containing protein
[Entamoeba histolytica HM-1:IMSS]
gi|56474587|gb|EAL51950.1| ubiquitin carboxyl-terminal hydrolase domain containing protein
[Entamoeba histolytica HM-1:IMSS]
gi|449707548|gb|EMD47193.1| ubiquitin carboxylterminal hydrolase domain containing protein
[Entamoeba histolytica KU27]
Length = 444
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 134/443 (30%), Positives = 208/443 (46%), Gaps = 96/443 (21%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGH 161
R CPY++TV+R ++DFD EK C +L +Y C++CGK+YQGR S AY HSLE H
Sbjct: 15 RTYCPYVETVDRSLIDFDKEKVCCKTLKTNQLYCCMICGKFYQGRDVGSPAYVHSLEENH 74
Query: 162 HVYINLRTEKVYCLPDGYEINDPSLEDIR------------------------------- 190
H++++L T++ + LP G E+ + S +DI
Sbjct: 75 HIFLSLSTKQFFNLPHGNEVIETSFKDIINALDPVYTLNDISHLDDENKVIQLKDHFNKK 134
Query: 191 ----HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-----LVHRFGDLT 241
++G NN+ TD +N +QS+ +RN L E + S L+ R L
Sbjct: 135 YIIGYIGFNNLGRTDSINCLLQSIGHCKEIRNLLLSYEEIENISSKARCGELIKRVSMLI 194
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNT 301
RK W++ K +SP+E + + + +K F I Q + +EF + +N L
Sbjct: 195 RKQWNSTIIKSVISPYELMSELSRL-RKNFSIEKQEDVIEFYMFFINALLP--------- 244
Query: 302 SIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPP 361
+ +CFQG++++ DG T + LDLPP
Sbjct: 245 --LTQCFQGQIQI------------------EEDGKKSIKKCTC---------IPLDLPP 275
Query: 362 PPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFT 421
PL+ D M++ IIPQ+ L +ILKK+DG+T T + + V R+ + LPKY+ ++RF
Sbjct: 276 MPLYPDQMKEKIIPQLLLKDILKKYDGKTDTLIGKRSV---RFLIKTLPKYLTFVIKRFE 332
Query: 422 KNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKL-------------RSKYDLIANI 468
+N F EKN T+V F L++ DY+ + K+ K Y L++ I
Sbjct: 333 RNTFQGEKNITVVEFE-DTLDMSDYVVNDSIKQQTKFVFLLLFYKVLLCSLLSYHLVSAI 391
Query: 469 VHDGKPEGGFYRVFVQRKSEELW 491
HDG E G Y F+ +S + W
Sbjct: 392 KHDGGIEDGTYSSFLYHQSLKKW 414
>gi|363755536|ref|XP_003647983.1| hypothetical protein Ecym_7334 [Eremothecium cymbalariae
DBVPG#7215]
gi|356892019|gb|AET41166.1| hypothetical protein Ecym_7334 [Eremothecium cymbalariae
DBVPG#7215]
Length = 472
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 140/435 (32%), Positives = 226/435 (51%), Gaps = 70/435 (16%)
Query: 73 EDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLN 132
E D+D+D++ L N + E R YLDT++++ LDFD EK C+V+LSN+N
Sbjct: 7 EISDDDEDDNYQALRNDNSLKRVKLFTENER---YLDTIDKKKLDFDLEKICAVTLSNIN 63
Query: 133 VYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYE-INDPSLEDIRH 191
VY+CLVCGKY QGR + S A+ HS+E H V+IN+++ K Y LPD Y+ IN SLE I++
Sbjct: 64 VYSCLVCGKYLQGRDEGSPAFAHSMEENHRVFINIQSLKTYVLPDDYQVINSQSLECIKY 123
Query: 192 ------------------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFL 221
VGLNNI D+ NV I L + P+R++ L
Sbjct: 124 CFRPTFEDSAVSEFPVPCFDLYNNKYLNGFVGLNNISSNDYSNVIILLLSHIKPVRDYLL 183
Query: 222 IPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVE 281
+ +N + +F L RKIW + K VSPHEFLQ V S K F + + +P
Sbjct: 184 LNDNLLKKDDVFLQKFTLLIRKIWSPKLPKKHVSPHEFLQHVSSISDKAFSLDRRGDPRS 243
Query: 282 FMSWLLN-TLHSDLRNTKKNTSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDD 339
F+ +++N + S R +K + + QGE+ + +I GN+ + +
Sbjct: 244 FLLFIVNKIMKSSNRGLRK---LFTKQLQGEVSIYTTKIEPVMEEGNNIKFVR------N 294
Query: 340 HDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHV 399
+N+++ T + F +L LDLPP PLFKD + Q+ L +LKK++G+ V H
Sbjct: 295 EENVSSNTVK--FWILSLDLPPKPLFKDGKSVASLTQIKLEQLLKKYNGK-----VEQHT 347
Query: 400 A-RMRY-RVTRLPKYMILHMRRFTKNNFFV-EKNPTLVNFPVKNLELKDYIPLPTPKENE 456
+++ ++ P Y++LH++RF +N + ++N +V F N+++ +
Sbjct: 348 KDSIKFSKIVSYPPYLLLHVKRFDSSNHSIKDRNQAVVEFQ-SNMDIGKF---------- 396
Query: 457 KLRSKYDLIANIVHD 471
+Y L+AN++++
Sbjct: 397 ----RYRLVANLIYE 407
>gi|254583656|ref|XP_002497396.1| ZYRO0F04554p [Zygosaccharomyces rouxii]
gi|238940289|emb|CAR28463.1| ZYRO0F04554p [Zygosaccharomyces rouxii]
Length = 459
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 139/410 (33%), Positives = 201/410 (49%), Gaps = 70/410 (17%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
+L+T++ + LDFD EK CSV+LS LN Y CLVCGKY +GR + + A+ HS+ HHV++N
Sbjct: 29 FLETIDERKLDFDLEKRCSVTLSPLNCYCCLVCGKYLRGRSENTPAFLHSVNEDHHVFVN 88
Query: 167 LRTEKVYCLPDGYEINDPS----LEDIRH------------------------------V 192
+ KVY LPD E+ D L IR+ V
Sbjct: 89 FNSLKVYLLPDNVEVEDKGRIQILARIRNAIRPSFSREEIDNSPHECFDLNNQQYTNGFV 148
Query: 193 GLNN-IKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
G NN D +NV + L + PLR+ FL+ ++Y + +V R G + RK+W + FK
Sbjct: 149 GFNNNASGNDSINVILSLLSHIIPLRDHFLL-QDYLE-EDEIVQRLGIIIRKLWSPKLFK 206
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSN-PVEFMSWLLNTLHSDLRNTKKNTSIIYECFQG 310
VS EFL + I + N P + WL+N L ++ + + + I+ + FQG
Sbjct: 207 PYVSSEEFLAYISVVDPN---ISSKVNDPRQIFIWLVNNL---IKKSSELSRILSDSFQG 260
Query: 311 ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVME 370
++VV K + KG + + S +PF L LDLPP PLFKD
Sbjct: 261 NVQVVTIPIKPVLDA------KGDVVKFQRETAHEKHSTVPFWSLTLDLPPTPLFKDNRN 314
Query: 371 KNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEK- 429
N +PQV + +LKKFDG+ + + +Y++ RLP+Y+ILH RF K N K
Sbjct: 315 ANDLPQVRIEELLKKFDGKQEQQFAQ---GLRKYKLIRLPRYLILHFNRFDKKNPLTVKG 371
Query: 430 -NPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGF 478
N TLV F K +E ++ S+Y L+AN+VHD F
Sbjct: 372 RNQTLVEFSQK-IEFQN--------------SRYTLVANVVHDTIGTTAF 406
>gi|367011451|ref|XP_003680226.1| hypothetical protein TDEL_0C01260 [Torulaspora delbrueckii]
gi|359747885|emb|CCE91015.1| hypothetical protein TDEL_0C01260 [Torulaspora delbrueckii]
Length = 459
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 145/412 (35%), Positives = 204/412 (49%), Gaps = 68/412 (16%)
Query: 106 PYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYI 165
+L+TVNR+ LDFD EK CSV+LS LNVY CLVCGKY QGR S A+ HS+ HHV++
Sbjct: 29 AFLETVNRKKLDFDAEKACSVTLSTLNVYCCLVCGKYLQGRRANSPAFLHSVNDNHHVFV 88
Query: 166 NLRTEKVYCLPDGYEINDPS----LEDIRH------------------------------ 191
+ T K Y LPDG EI D L IR+
Sbjct: 89 DFITLKFYLLPDGIEIEDNGRIQLLNSIRYAIRPQFTKNEISQFPTGCQDLNDNTYFNGF 148
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
+G+NN VNV + +L + PLR++ L+ + + + R RKIW + FK
Sbjct: 149 IGVNNSARNKSVNVVLLALAHLRPLRDYCLLAKIDQ--EDEFTRRLALFIRKIWSVKLFK 206
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGE 311
VS EFL A + + KR + ++P + + WLL + + + K SI+ E QG+
Sbjct: 207 QHVSVDEFL-AFVTVNDKRSAKNL-NDPRKCLLWLLECIQT---SAPKLKSILSEACQGK 261
Query: 312 LEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEK 371
+ V K K I D+N + D +++++ +PF L LDLPP PLFK +
Sbjct: 262 VLVTKTGVK-VIYDEDENVK------DFTREKSSKSTSVPFWSLTLDLPPRPLFKGQINV 314
Query: 372 NIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRF--TKNNFFVEK 429
N +PQV L +++ KF+G + E H M+Y++ +LPKY++LH+ RF T +
Sbjct: 315 NDLPQVRLEDLMCKFNG--IKEKQMSHHI-MQYKILKLPKYLVLHVDRFDSTDAQPVKNR 371
Query: 430 NPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRV 481
N TLV F PL E S Y L+ANIVH G RV
Sbjct: 372 NHTLVEF-----------PLTMKVEG----STYKLLANIVHQVSRTAGTTRV 408
>gi|50309163|ref|XP_454587.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643722|emb|CAG99674.1| KLLA0E14125p [Kluyveromyces lactis]
Length = 477
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 144/444 (32%), Positives = 210/444 (47%), Gaps = 78/444 (17%)
Query: 72 GEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCP--YLDTVNRQVLDFDFEKFCSVSLS 129
GE D D D D D +N G+ V+ +R P YLD ++ + LDFD EK CSV+LS
Sbjct: 9 GEIIDSDGDVDHD--SNKVGKID----VQQKRSVPKVYLDQIDMKKLDFDREKVCSVTLS 62
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEIN---DPSL 186
NVY CL GKY QGRGQ S A+ H++E+ HHV++NL++ KVY LP+ YE + L
Sbjct: 63 RSNVYCCLSSGKYLQGRGQNSVAFKHAIESDHHVFLNLKSLKVYVLPENYEADVVPGSLL 122
Query: 187 EDIRH------------------------------VGLNNIKETDFVNVTIQSLMRVTPL 216
DI + VG+NN+ + V +Q+L V P+
Sbjct: 123 SDIVYAASPRFHNSQLQTFPKVCHDLNDKRYLNGFVGMNNLTPDGYSVVVLQALAHVLPI 182
Query: 217 RNFFLIPENYRHCKSP------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKR 270
R++FL+ E+ + L+ L RK+W + + +SPHE L + SK+R
Sbjct: 183 RDYFLLGESSSGYNTDENDGPGLIGSLSLLIRKLWSCKLLRRNISPHELLNYISLVSKRR 242
Query: 271 FRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNT 330
F + +P F+ WL+++L + + T + + FQG +E+ P T+
Sbjct: 243 FPVDDSRDPRSFLLWLISSLCASKEPSLVRT--VTDQFQGHVEIT-STPIETVVD----- 294
Query: 331 EKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGET 390
EKG T T + F +L LDLP LF + N + Q L +L+KF+GET
Sbjct: 295 EKGKTMKFKKLEAATTTQKTKFWLLSLDLPQMNLFSNGNSANSVSQTKLETLLQKFNGET 354
Query: 391 VTEVVRPHV--ARMRYRVTRLPKYMILHMRRFTKNNFFV-EKNPTLVNFPVKNLELKDYI 447
H + YR+ + PK++ILH RF K + ++N TLV F K LE
Sbjct: 355 -----EYHTKDSIKTYRILKHPKFLILHFNRFDKGFTSIKDRNKTLVEFSEK-LEFSGV- 407
Query: 448 PLPTPKENEKLRSKYDLIANIVHD 471
Y L+ NI HD
Sbjct: 408 -------------HYKLLVNITHD 418
>gi|195174706|ref|XP_002028113.1| GL21350 [Drosophila persimilis]
gi|194115853|gb|EDW37896.1| GL21350 [Drosophila persimilis]
Length = 300
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 110/263 (41%), Positives = 161/263 (61%), Gaps = 11/263 (4%)
Query: 233 LVHRFGDLTRKIWHARNFKGQVSPHEFLQA-VMKASKKRFRIGVQSNPVEFMSWLLNTLH 291
LV RFG+L RK A+ + VSPHE + S KRF+I Q +P++F+SW LNTLH
Sbjct: 12 LVQRFGELMRKCASAQLQRLNVSPHETAAGRWVLWSSKRFQITEQGDPIDFLSWFLNTLH 71
Query: 292 SDLRNTKK-NTSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSR 349
L+ K+ N+SI+Y F GE+++ +++P + +D EK + D +
Sbjct: 72 RALKGNKQPNSSILYNIFLGEMQIFTRKMPP--VELDDAAKEKLLATEEYQDQV----EH 125
Query: 350 MPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARM-RYRVTR 408
F+ L DLPPPPLF D +NIIPQV L+ +L KF+G E M R+ +TR
Sbjct: 126 TNFIYLTCDLPPPPLFTDEFRENIIPQVNLYQLLGKFNGSAEKEYKTYKDNFMKRFEITR 185
Query: 409 LPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANI 468
LP+++IL+++RFTKN FF+EKNPT+VNFP+KN++ D + + ++ K +KY+L+ANI
Sbjct: 186 LPQFIILYIKRFTKNTFFLEKNPTIVNFPIKNVDFGDILGMRQRDKDVK-DTKYNLVANI 244
Query: 469 VHDGKPEGGFYRVFVQRKSEELW 491
VHDG P+ G YR + K+ W
Sbjct: 245 VHDGDPKKGTYRAHILHKANGQW 267
>gi|407040896|gb|EKE40394.1| ubiquitin carboxyl-terminal hydrolase domain containing protein
[Entamoeba nuttalli P19]
Length = 375
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 123/397 (30%), Positives = 191/397 (48%), Gaps = 83/397 (20%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGH 161
R CPY++TV+R ++DFD EK C +L +Y C++CGK+YQGR S AY HSLE H
Sbjct: 15 RTYCPYVETVDRSLIDFDKEKVCCKTLKTNQLYCCMICGKFYQGRDVGSPAYVHSLEENH 74
Query: 162 HVYINLRTEKVYCLPDGYEINDPSLEDIR------------------------------- 190
H++++L T++ + LP G E+ + S +DI
Sbjct: 75 HIFLSLSTKQFFNLPHGNEVIETSFKDIINALDPVYTLNDISHLDDESKVIQLKDHFNKK 134
Query: 191 ----HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-----LVHRFGDLT 241
++G NN+ +TD +N +QS+ +RN L E S L+ R L
Sbjct: 135 YIIGYIGFNNLGKTDSINCLLQSIGHCKEIRNLLLNYEEVEKVSSKAKCGELIKRVSMLI 194
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNT 301
RK W++ K +SP+E + + +K F I Q + +EF + +N L
Sbjct: 195 RKQWNSTIIKSVISPYELMSEFSRL-RKNFSIEKQEDVIEFYMFFINALLP--------- 244
Query: 302 SIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPP 361
+ +CFQG++++ DG N T + LDLPP
Sbjct: 245 --LTQCFQGQIQI------------------EEDGKKSIKNCTC---------IPLDLPP 275
Query: 362 PPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFT 421
PL+ D M++ IIPQ+ L +ILKK+DG+T T + + V R+ + LPKY+ ++RF
Sbjct: 276 MPLYPDQMKEKIIPQLLLKDILKKYDGKTDTLISKRSV---RFLIKTLPKYLTFVIKRFE 332
Query: 422 KNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKL 458
+N F EKN T+V F L++ DY+ + K+ K
Sbjct: 333 RNTFQGEKNITVVEFE-DTLDMSDYVVNDSRKQQTKF 368
>gi|76156067|gb|AAX27305.2| SJCHGC05849 protein [Schistosoma japonicum]
Length = 251
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/220 (44%), Positives = 127/220 (57%), Gaps = 46/220 (20%)
Query: 72 GEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNL 131
GE D+E + + N + RSR CPYLDT+ R +LDFDFEK CS+SLS+L
Sbjct: 36 GESDEEPVRTGNEAVFNDMNEDTRSR------SCPYLDTIRRNMLDFDFEKLCSISLSHL 89
Query: 132 NVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH 191
NVYACL+CGKY+QGRG +HAYTHS+ HHV++NL T + YCLPD YEI D SLEDI +
Sbjct: 90 NVYACLICGKYFQGRGNSTHAYTHSVSENHHVFLNLETRRFYCLPDDYEILDGSLEDITY 149
Query: 192 ---------------------------------VGLNNIKETDFVNVTIQSLMRVTPLRN 218
VGLNNIK D+ NV +Q L ++PLR+
Sbjct: 150 LLNPTFSTSEILALDSSSKMVRAYNGLTYYPGVVGLNNIKANDYCNVILQMLSHISPLRD 209
Query: 219 FFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFK 251
+FL +N+ + + LV RF +L RK+W+ RNFK
Sbjct: 210 YFLNIKNFDNLPTISGDQMMLLVQRFSELIRKLWNPRNFK 249
>gi|255710529|ref|XP_002551548.1| KLTH0A02046p [Lachancea thermotolerans]
gi|238932925|emb|CAR21106.1| KLTH0A02046p [Lachancea thermotolerans CBS 6340]
Length = 470
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/376 (32%), Positives = 189/376 (50%), Gaps = 49/376 (13%)
Query: 106 PYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYI 165
PYL+TV+ + LDFD EK CSV+LS LNVY CLVCG+Y QGRG+K+ A+ HS++ HHV+I
Sbjct: 37 PYLETVDVRKLDFDLEKLCSVTLSPLNVYCCLVCGRYLQGRGEKTVAFLHSIQEDHHVFI 96
Query: 166 NLRTEKVYCLPDGYEINDPSL--------------EDIRH-----------------VGL 194
N + K Y LP+ E+ L ED+ +GL
Sbjct: 97 NFVSLKTYLLPENREVQGVQLLETIKFAISPKYTQEDLLQFPRMCFDKSNTPYINGFIGL 156
Query: 195 NNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQV 254
N++ + ++V IQ + +TP+R+FFL+ E+ L+ R L +K+W K +
Sbjct: 157 NDLGDNTHLSVIIQMMAHITPIRDFFLL-ESQSKIDDELIKRLALLIKKLWSPHILKAHL 215
Query: 255 SPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEV 314
SP+E LQ + + +K +P FM WL+N + + KK ++ +GE+EV
Sbjct: 216 SPYELLQQLSRVNKNVNSDNRIKDPKSFMLWLINYMIAKAHPLKK---VLTRNMRGEVEV 272
Query: 315 VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMP-FLMLGLDLPPPPLFKDVMEKNI 373
+ + + ++N E D T+T +P F L LDLPP LF + + N
Sbjct: 273 RSIVVREKGTTGEKNLEFFEDEA-------TKTIVLPKFWSLTLDLPPVSLFNEGSDTNS 325
Query: 374 IPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFF--VEKNP 431
IPQV L ++L KF G + + +Y++ + P+++ ++ RF + +N
Sbjct: 326 IPQVTLDSLLGKFSGH---KKIPTREGMKQYKIVKYPRFLAINFDRFNWDAAMPIRNRNR 382
Query: 432 TLVNFP-VKNLELKDY 446
TLV F E KDY
Sbjct: 383 TLVKFADALRFENKDY 398
>gi|344302364|gb|EGW32669.1| hypothetical protein SPAPADRAFT_61740 [Spathaspora passalidarum
NRRL Y-27907]
Length = 400
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 130/416 (31%), Positives = 206/416 (49%), Gaps = 71/416 (17%)
Query: 109 DTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLR 168
+ +NR++LDFDFEK CSV+LS+ N+ CL CGKY+QG S AY HS+ +GH Y+NL
Sbjct: 12 NQINRKLLDFDFEKTCSVTLSSNNINCCLTCGKYFQGNSPSSPAYNHSITSGHTKYLNLT 71
Query: 169 TEKVYCLPDGYEIN------------DP-----SLED--------------IRHVGLNNI 197
K + LP+ E DP S+E+ + +VGLNN
Sbjct: 72 NHKFFVLPENTEWEGISSVQDIIYYLDPQYTKQSIEESPETALDLNNEKYLVGYVGLNNF 131
Query: 198 KETDFVNVTIQSLMRVTPLRNFFLIPENYRHC-----KSPLVHRFGDLTRKIWHARNFKG 252
K ++NV + L + P+R+F+L+ ++H KSP+ + L RKIW FK
Sbjct: 132 KSNSYINVVLHCLAHIEPIRDFYLLLPKHKHYETITRKSPINDKLSLLVRKIWSPHLFKS 191
Query: 253 QVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGE 311
++PHE + + + S K+F I + P F+ WL+NTLHS L + TK + + QG+
Sbjct: 192 HIAPHELINCISEISNKKFTIEHEQPPKNFLIWLVNTLHSQLVKTTKSKHTTFSQNLQGK 251
Query: 312 LEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEK 371
+E+ TI Q + + T S+ F +L LD+P PL ++K
Sbjct: 252 IEIT------TIPIISQEVKSRVEFTTIESKSKTVESK--FWLLSLDIPHNPLLTAQLDK 303
Query: 372 NIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTR-LPKYMILHMRRFTKNNFFVEKN 430
I +V + +L+K++G T T+V V Y+V LP Y+I+ + + N
Sbjct: 304 --IEEVEIEALLEKYNGTTQTQVNENEVR--TYKVLEPLPPYLIISFEKTS--------N 351
Query: 431 PTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRK 486
T+V FP + L + Y K ++++ Y L++ I D + + + +QRK
Sbjct: 352 STVVKFP-EILNMNKYT-----KSDKEIN--YKLVSTIRQDNQ-----WSISLQRK 394
>gi|412988066|emb|CCO19462.1| U4/U6.U5 tri-snRNP-associated protein 2 [Bathycoccus prasinos]
Length = 492
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 138/411 (33%), Positives = 191/411 (46%), Gaps = 96/411 (23%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLE-AGHHVYI 165
YL VNR +LDFDFEK CSVS + N Y CL CG ++ GRG K+ AYTH+LE H V++
Sbjct: 92 YLSFVNRPLLDFDFEKRCSVSFAKENCYCCLTCGHFFAGRGPKTPAYTHALERENHFVFM 151
Query: 166 NLRTEKVYCLPDGYEINDPSLEDIRH---------------------------------V 192
+L + +CLPD YEI D SLED+R V
Sbjct: 152 HLENGRAFCLPDNYEIFDASLEDVRKVLFPRFTSEEIKRLEKEAIWSKALDGTEYLVGVV 211
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGD----LTRKIWHAR 248
GLN ++ VN +QSL RV LR FL R + D L ++IW+
Sbjct: 212 GLNRVENAKGVNSIVQSLARVEKLRAHFLSASLIRSDGNNNNKNENDTLQSLCQRIWNKH 271
Query: 249 NFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNT---SIIY 305
NF+G SP F++ + K K ++++ + L N + LR+ +
Sbjct: 272 NFRGHTSPDSFVRKLRKQIKLAHPEKLETD----IDNLFNDPFATLRHFLTFVVPKKYVD 327
Query: 306 ECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLF 365
E F+GEL ++ N +N + PF+ + L LP PLF
Sbjct: 328 ELFRGELLML----------NQKNKTQ------------------PFVFVPLKLPDAPLF 359
Query: 366 KDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMIL-HMRRFTKNN 424
+DVMEKN IPQV L +LK F +T P+Y+IL + RF+KN
Sbjct: 360 RDVMEKNAIPQVALAELLKPFALKTA------------------PEYLILAFVNRFSKNQ 401
Query: 425 FF--VEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGK 473
F V KNPT+V FPVKNL+++ + + YDL+AN+ GK
Sbjct: 402 FTKEVSKNPTIVTFPVKNLKIQASSAAGSNSNSNPF--SYDLLANVDSAGK 450
>gi|241957679|ref|XP_002421559.1| ubiquitin carboxyl hydrolase, putative [Candida dubliniensis CD36]
gi|223644903|emb|CAX40901.1| ubiquitin carboxyl hydrolase, putative [Candida dubliniensis CD36]
Length = 391
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/345 (32%), Positives = 176/345 (51%), Gaps = 71/345 (20%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGH 161
RR D +NR+VLDFDF K CS +LS++NVY CLVCGKY++GR + S AY H++ H
Sbjct: 8 RRRIEAGDVINREVLDFDFAKVCSQTLSSINVYCCLVCGKYFEGRSESSPAYNHAISTNH 67
Query: 162 HVYINLRTEKVYCLPDGYEINDPSLEDI------------------------------RH 191
Y++ TEK Y LP+G EI PS +D+ +
Sbjct: 68 QKYLSFETEKFYLLPEGKEI--PSQQDVIDYLNPRYTQRDIELLPRISFDLHTKKYLVGY 125
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
VGLNNIK D+ NV +Q L + P+RN +L+ + + S L L RK+W FK
Sbjct: 126 VGLNNIKNNDYANVVVQVLAHIEPIRNHYLLMADNTNSDS-LNGHLALLIRKMWSPHLFK 184
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGE 311
++PHEF+ +V+ SKKRF + + +P F+ WLLN + YEC +GE
Sbjct: 185 SHIAPHEFMNSVIDTSKKRFTLE-KGHPKLFLVWLLNGVDGP-----------YECLRGE 232
Query: 312 LEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEK 371
+E+ T + +EK + ++ T+T++ F L +D+P
Sbjct: 233 IEIT-----TTPVVPHEGSEKV-----EFVSLDTKTTQSKFWFLSVDVPSQ--------- 273
Query: 372 NIIPQVPLFNILKKFDGETVTEVVRPHVARMR-YRVTRLPKYMIL 415
+ +V L +++K+DGE+ T+ + +R Y++ PK+M++
Sbjct: 274 --VEEVSLVELMRKYDGESTTQGKQ----EIRTYKIVEYPKFMVV 312
>gi|156843267|ref|XP_001644702.1| hypothetical protein Kpol_1056p45 [Vanderwaltozyma polyspora DSM
70294]
gi|156115350|gb|EDO16844.1| hypothetical protein Kpol_1056p45 [Vanderwaltozyma polyspora DSM
70294]
Length = 451
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 127/401 (31%), Positives = 202/401 (50%), Gaps = 82/401 (20%)
Query: 108 LDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINL 167
L+TVN++ LDFD EK CSV+ S+LNVY CL+CGKY QGR + S A+ HS+ H V+INL
Sbjct: 33 LNTVNKKRLDFDIEKICSVTSSSLNVYCCLICGKYLQGRREHSPAFLHSVNENHFVFINL 92
Query: 168 RTEKVYCLPDGYEINDPS----LEDIR------------------------------HVG 193
T KVY LP EI D + DIR +VG
Sbjct: 93 DTLKVYNLPTDIEIKDQGKIQLINDIRYAIYPRFDKSEIIHFPQRCFDLNNKLYINGYVG 152
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
++N++ FV +Q L + P+R++FL+ E + + + RK+W + FK
Sbjct: 153 ISNVQSNGFVQSILQLLAHIEPIRDWFLLNE--IDSEESFMKNIKLIIRKLWSTKLFKSH 210
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELE 313
+S EF + + + F +Q + +LL ++S ++++++ I+ E G++
Sbjct: 211 ISADEFFAFL--SIHENFEKMIQDPKI----FLLKIINSIIKSSQELGLILKEQLLGKV- 263
Query: 314 VVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNI 373
I + ISG + N+ K + PF +L LDLP +F++ +E N
Sbjct: 264 ---SISTSAISGKEANSNK--------------VVKSPFWLLTLDLPTQTVFRNALEVND 306
Query: 374 IPQVPLFNILKKFDGETVTEVVRPHVARM-RYRVTRLPKYMILHMRRF--TKNNFFVEKN 430
+PQV L +L KF+G + E P + + +Y++ +LP+Y+ILH RF + ++N
Sbjct: 307 LPQVKLGELLIKFNG--INEY--PTLGGVKKYKILKLPRYLILHFNRFDNKEKTPVKDRN 362
Query: 431 PTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHD 471
TLV FP +EL+ ++KY LIANI+H+
Sbjct: 363 QTLVEFPTL-MELQ--------------KTKYQLIANIIHE 388
>gi|66357988|ref|XP_626172.1| SnRNP assembly defective 1 like ubiquitin C-terminal hydrolase with
a UBP finger at the N-terminus [Cryptosporidium parvum
Iowa II]
gi|46227011|gb|EAK87961.1| SnRNP assembly defective 1 like ubiquitin C-terminal hydrolase with
a UBP finger at the N-terminus [Cryptosporidium parvum
Iowa II]
Length = 498
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 135/471 (28%), Positives = 205/471 (43%), Gaps = 100/471 (21%)
Query: 105 CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVY 164
CPYL ++ R VLDFD+EK CSV+L ++Y CLVCG YQG+G+ S AY HSLE HH++
Sbjct: 12 CPYLSSIKRSVLDFDYEKICSVTLREEHIYCCLVCGINYQGKGKGSMAYKHSLELKHHLF 71
Query: 165 INLRTEKVYCLPDGYEINDPSLEDIR-------------------------------HVG 193
INL + CLP+ YEI + SLEDI+ +G
Sbjct: 72 INLTNSSIICLPNDYEIYEHSLEDIKGYLQPRFNSEIISSSLYDVSRTFDGIEFSPGFIG 131
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY-----RHCKSPLVHRFGDLTRKIWHAR 248
L+N D +N I L R+T R+ L + Y + PL+ + +KI++
Sbjct: 132 LSNFGNNDSLNSIILILSRITEFRDLCLSYQLYSKEIEKRIPDPLLFSIIESIQKIYNPN 191
Query: 249 NFKGQVSPHEFLQAVMKASKKRFRIG------------VQSN----------PVEFMSWL 286
N KG+ SP+ ++ + K S +F +QSN P+ SW+
Sbjct: 192 NLKGKFSPYNLVKIIEKKSNGKFSFSKISNISTSSNSFIQSNVGTQNSTIIDPMALFSWI 251
Query: 287 LNTLHSDL----------------RNT-KKNTSIIYECFQGELEVVKEIPKNTISGNDQN 329
L + +NT K N +I C +GEL K + N++
Sbjct: 252 TYNLKKKIDKYLRKFQIKFIPDIDKNTNKSNMNIFDVCIKGEL-----YNKASKYPNNKK 306
Query: 330 TEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVM---------EKNIIPQVPLF 380
+E +D + S L L P + + M E I Q+P++
Sbjct: 307 SESSTDNLMKSKKCSELKSTASICFNCLSLTLPSIIETTMGISNSAQSNEDKTISQIPIY 366
Query: 381 NILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKN 440
+L + + +++LP Y+ +H RF+K N +EKN TLV+FP+ +
Sbjct: 367 QLL---------DSKFFSSSSSSQLISKLPYYLFIHFSRFSKANLNLEKNKTLVSFPLID 417
Query: 441 LELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
L+L YI N +KY+LIANI H G + G + + + W
Sbjct: 418 LDLSSYIHPDYISLNP--CTKYNLIANISHKGTIQSGKFLTQLLHPTRNEW 466
>gi|255728995|ref|XP_002549423.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240133739|gb|EER33295.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 400
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 126/376 (33%), Positives = 192/376 (51%), Gaps = 74/376 (19%)
Query: 109 DTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLR 168
DT++R++LDFDFEK CSV+L + NVY CLVCGKY+QGR + S AY H++ HH ++NL
Sbjct: 16 DTIHRELLDFDFEKVCSVTLDSTNVYCCLVCGKYFQGRSKSSPAYNHAITMNHHKFLNLT 75
Query: 169 TEKVYCLPDGYEI-NDPSLEDIR------------------------------HVGLNNI 197
+EK Y LP+ EI L+DI +VGLNNI
Sbjct: 76 SEKFYNLPEDIEIPKSHELQDILEYLNPRYTQRDIDLLPRISFDLNSEKYRVGYVGLNNI 135
Query: 198 KETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPH 257
K D+ NV +Q+L + P+R+++L N + L +FG+L RKIW FK +SP
Sbjct: 136 KHNDYANVVVQALAHIKPIRDYYLQLPN----GNSLNAKFGELVRKIWSPHLFKSHISPQ 191
Query: 258 EFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKE 317
F+ + + SK++F + P F+ W+LN L ++C +G++E+
Sbjct: 192 GFITTISEESKRKFTTE-KGTPKAFLLWILNKLDGP-----------FQCLRGKIEITST 239
Query: 318 --IPKNTISGNDQNTEKGSDGGDDHDNITTETSRMP----FLMLGLDLPPPPLFKDVMEK 371
+P +G D + +T E+ R F +L +D+P F +K
Sbjct: 240 PIVPH--------------EGNDKVEFVTLESKRKTTESNFWILSVDVPSSS-FNSHGDK 284
Query: 372 NIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNP 431
I ++ L ++L K+DGET T+ P R Y+VT+LP+Y+I+ R +K + V K P
Sbjct: 285 --IEELHLEDLLLKYDGETTTQ--GPKDIRT-YKVTKLPQYLIISYER-SKESKAVVKFP 338
Query: 432 TLVNFPVKNLELKDYI 447
++ F K EL I
Sbjct: 339 EVLEFYGKKYELVSSI 354
>gi|374109923|gb|AEY98828.1| FAGR007Cp [Ashbya gossypii FDAG1]
Length = 498
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 139/442 (31%), Positives = 215/442 (48%), Gaps = 65/442 (14%)
Query: 67 QNGRTGEDDDEDKDEDEDDLANGYGQGQRSRL-VEVRRDCPYLDTVNRQVLDFDFEKFCS 125
+ R GE ++ +E D + Y + RL + + L T+ ++ LDF EK CS
Sbjct: 24 ETARVGERMPGKREVEESDSEDLYREEGNKRLHISSSDERGLLQTIEKKRLDFYSEKVCS 83
Query: 126 VSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-NDP 184
V+LS ++VY+CL CGKY QGR + S A+ HS+E H +++++RT K Y LP+ N
Sbjct: 84 VTLSTIDVYSCLTCGKYLQGRNEGSPAFKHSIEDLHRLFMHMRTFKTYILPENRPFRNAE 143
Query: 185 SLEDIRH------------------------------VGLNNIKETDFVNVTIQSLMRVT 214
L+ IR+ VGL+NI NV + L +
Sbjct: 144 VLDQIRYGFKPTYGRLQVADFPQDCEDLNGQPYLNGFVGLHNISNNGSSNVILLMLAHIK 203
Query: 215 PLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG 274
P+R+ FL+ ++ P +++ L R IW F+ VSPHEFLQ V + +
Sbjct: 204 PVRDLFLLNDDLLERADPFINKLALLIRHIWSPNLFRRHVSPHEFLQYVATHLAQPSSMK 263
Query: 275 VQSNPVEFMSWLLN-TLHSDLRNTKKNTSIIYECFQGELEV--VKEIPKNTISGNDQNTE 331
S+P FM +++N L S +K + + QG + + K +P + ND
Sbjct: 264 AYSDPRNFMLFVINRMLKSSCGEVRKTLT---DNIQGTVTIRTTKIVP----APNDD--- 313
Query: 332 KGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETV 391
GS D T +++ + F ML LDLPP PLFKD N +PQV L ++ KFDG TV
Sbjct: 314 -GSAIKFVLDTRTAKSTDVMFWMLSLDLPPRPLFKDGKSANSLPQVKLEELMGKFDG-TV 371
Query: 392 TEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFV-EKNPTLVNFPVKNLELKDYIPLP 450
+ ++ V +V+R P+Y++LH++RF F V E+N T+V F + LE +
Sbjct: 372 EQHLKESVK--LNKVSRCPRYLVLHLKRFEPGKFPVQERNQTVVEFG-QELEFRSV---- 424
Query: 451 TPKENEKLRSKYDLIANIVHDG 472
K+ L+ N+VH+
Sbjct: 425 ----------KFRLLMNVVHEA 436
>gi|302309338|ref|NP_986672.2| AGR007Cp [Ashbya gossypii ATCC 10895]
gi|299788311|gb|AAS54496.2| AGR007Cp [Ashbya gossypii ATCC 10895]
Length = 498
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 138/442 (31%), Positives = 215/442 (48%), Gaps = 65/442 (14%)
Query: 67 QNGRTGEDDDEDKDEDEDDLANGYGQGQRSRL-VEVRRDCPYLDTVNRQVLDFDFEKFCS 125
+ R GE ++ +E D + Y + RL + + L T+ ++ LDF EK CS
Sbjct: 24 ETTRVGERMPGKREVEESDSEDLYREEGNKRLHISSSDERGLLQTIEKKRLDFYSEKVCS 83
Query: 126 VSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-NDP 184
V+LS ++VY+CL CGKY QGR + S A+ HS+E H +++++RT K Y LP+ N
Sbjct: 84 VTLSTIDVYSCLTCGKYLQGRNEGSPAFKHSIEDLHRLFMHMRTFKTYILPENRPFRNAE 143
Query: 185 SLEDIRH------------------------------VGLNNIKETDFVNVTIQSLMRVT 214
L+ IR+ VGL+NI NV + L +
Sbjct: 144 VLDQIRYGFKPTYGRLQVADFPQDCEDLNGQPYLNGFVGLHNISNNGSSNVILLMLAHIK 203
Query: 215 PLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG 274
P+R+ FL+ ++ P +++ L R IW F+ VSPHEFLQ V + +
Sbjct: 204 PVRDLFLLNDDLLERADPFINKLALLIRHIWSPNLFRRHVSPHEFLQYVATHLAQPSSMK 263
Query: 275 VQSNPVEFMSWLLN-TLHSDLRNTKKNTSIIYECFQGELEV--VKEIPKNTISGNDQNTE 331
S+P FM +++N L S +K + + QG + + K +P + +D
Sbjct: 264 AYSDPRNFMLFVINRMLKSSCGEVRKTLT---DNIQGTVTIRTTKIVP---VPNDD---- 313
Query: 332 KGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETV 391
GS D T +++ + F ML LDLPP PLFKD N +PQV L ++ KFDG TV
Sbjct: 314 -GSAIKFVLDTRTAKSTDVMFWMLSLDLPPRPLFKDGKSANSLPQVKLEELMGKFDG-TV 371
Query: 392 TEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFV-EKNPTLVNFPVKNLELKDYIPLP 450
+ ++ V +V+R P+Y++LH++RF F V E+N T+V F + LE +
Sbjct: 372 EQHLKESVK--LNKVSRCPRYLVLHLKRFEPGKFPVQERNQTVVEFG-QELEFRSV---- 424
Query: 451 TPKENEKLRSKYDLIANIVHDG 472
K+ L+ N+VH+
Sbjct: 425 ----------KFRLLMNVVHEA 436
>gi|397635035|gb|EJK71690.1| hypothetical protein THAOC_06844 [Thalassiosira oceanica]
Length = 631
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 135/255 (52%), Gaps = 68/255 (26%)
Query: 105 CPYLDTVNRQVLDFDF-EKFCSVSL-SNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
CPYLDT+NR LDFD + CSV+L ++ ++YACLVCGK+++GRG+++ AYTH++E GH+
Sbjct: 20 CPYLDTINRPALDFDAPDHACSVTLDASPHIYACLVCGKFFRGRGRQTPAYTHAVEEGHY 79
Query: 163 VYINLRTEKVYCLPDGYEI--NDPSLEDI------------------------------- 189
V+++L +CLPDGYE+ ++PSL DI
Sbjct: 80 VFVHLTNGTFWCLPDGYEVPRSEPSLRDIGLALHPKFEPAEVAGLDGNDELARDLFGRRY 139
Query: 190 --RHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCK----------------- 230
VGLNN+ +TD++N +Q+L V PLR++FL+ N+
Sbjct: 140 LPGFVGLNNLSKTDYLNAVVQALAHVRPLRDYFLLAPNFDELGGGAGEAPAGGGGKRRLA 199
Query: 231 --------------SPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQ 276
SPL F L R +W + FK V PH +QAV AS KR+ +G Q
Sbjct: 200 GQQQQVRRLAYSEFSPLARSFSLLLRNMWSSHRFKSNVDPHMLVQAVSAASNKRYHVGRQ 259
Query: 277 SNPVEFMSWLLNTLH 291
+ EF++WLL+ LH
Sbjct: 260 AEAGEFLAWLLHQLH 274
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 70/110 (63%), Gaps = 14/110 (12%)
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPH------------- 398
FL L LD+P PLFKD +IPQ PL N+L+KFDG + ++V+
Sbjct: 384 FLQLTLDIPEKPLFKDKDGGLVIPQEPLVNVLRKFDGVSFSDVLASQQQPAQSKQGDGTV 443
Query: 399 VARMR-YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYI 447
V+R R Y++ RLP Y+ILH+ RF KN +F+EKNPT+V FPVKN +L Y+
Sbjct: 444 VSRKRRYKLKRLPNYLILHLSRFKKNGYFIEKNPTIVMFPVKNFDLSQYV 493
>gi|67609257|ref|XP_666934.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54658011|gb|EAL36705.1| hypothetical protein Chro.50143 [Cryptosporidium hominis]
Length = 425
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 126/428 (29%), Positives = 188/428 (43%), Gaps = 102/428 (23%)
Query: 105 CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVY 164
CPYL ++ R VLDFD+EK CSV+L ++Y CLVCG YQG+G+ S AY HSLE HH++
Sbjct: 12 CPYLSSIKRSVLDFDYEKICSVTLREEHIYCCLVCGINYQGKGKGSMAYKHSLELKHHLF 71
Query: 165 INLRTEKVYCLPDGYEINDPSLEDIR-------------------------------HVG 193
INL + CLP+ YEI + SLEDI+ +G
Sbjct: 72 INLTNSSIICLPNDYEIYEHSLEDIKGYLQPRFNSEIISSSLYDVSRTFDGIEFFPGFIG 131
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY-----RHCKSPLVHRFGDLTRKIWHAR 248
L+N D +N I L R+T R+ L + Y + PL+ + +KI++
Sbjct: 132 LSNFGNNDSLNSIILILSRITEFRDLCLSYQLYSKEIEKRIPDPLLFSIIESIQKIYNPN 191
Query: 249 NFKGQVSPHEFLQAVMKASKKRFRIG------------VQSN----------PVEFMSWL 286
N KG+ SP+ ++ + K S +F +QSN P+ SW+
Sbjct: 192 NLKGKFSPYNLVKIIEKKSNGKFSFSKISNISTSSNSFIQSNVGTQNSTIIDPMALFSWI 251
Query: 287 LNTLHSDL----------------RNT-KKNTSIIYECFQGELEVVKEIPKNTISGNDQN 329
L + +NT K N +II C +G+L K + N++
Sbjct: 252 TYNLKKKIDKYLRKFQIKFIPDIDKNTNKSNMNIIDVCIKGKL-----YNKASKYPNNKK 306
Query: 330 TEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVM---------EKNIIPQVPLF 380
+E +D S L L P + + M E I Q+P++
Sbjct: 307 SESSTDNLMKSKKCPELKSTASICFNCLSLTLPSIIETTMGISNSAQSNEDKTISQIPIY 366
Query: 381 NIL-KKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVK 439
+L KF T +++LP Y+ +H RF+K N +EKN TLV+FP+
Sbjct: 367 QLLDSKFFSST------------SQLISKLPYYLFIHFSRFSKANLNLEKNKTLVSFPLI 414
Query: 440 NLELKDYI 447
+L+L YI
Sbjct: 415 DLDLSSYI 422
>gi|444317463|ref|XP_004179388.1| hypothetical protein TBLA_0C00530 [Tetrapisispora blattae CBS 6284]
gi|387512429|emb|CCH59869.1| hypothetical protein TBLA_0C00530 [Tetrapisispora blattae CBS 6284]
Length = 483
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 125/420 (29%), Positives = 204/420 (48%), Gaps = 56/420 (13%)
Query: 93 GQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHA 152
+R + ++ + + LDT+N ++LDFDF+K C +S S++NVY CL CGKY QGR + + A
Sbjct: 17 NERFKRLKSQPNLSMLDTINIKLLDFDFDKVCCISSSSINVYCCLTCGKYLQGRLENTPA 76
Query: 153 YTHSLEAGHHVYINLRTEKVYCLPDGYEIND----PSLEDIRH----------------- 191
+ HSL H ++IN +T K+Y LPD +D + +IRH
Sbjct: 77 FIHSLNFNHRLFINFQTLKIYILPDNTLFHDEGTISVINEIRHLISPTFEEEEISTFPKR 136
Query: 192 -------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRH--CKSP-LVH 235
V LN+ +T ++ + + +TP+R++FL+ ++ KSP L +
Sbjct: 137 CLSLNKKEYLTGFVNLNSTSDTSYITTIVLAFAHITPIRDYFLLKKDDVGDILKSPNLEN 196
Query: 236 RFGDLTRKIWHARNFKGQVSPHEFLQA--VMKASKKRFRIGVQSNPVEFMSWLLNTLHSD 293
+ G L RKIW + K +SP+E + + + S Q+ P++ + L TL
Sbjct: 197 KLGLLIRKIWSPQLAKPHISPNELIDYLNIHQKSNNESTPSQQTVPLKNPTTFLLTLIHQ 256
Query: 294 LRNTKKNT-SIIYECFQGELEV--VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM 350
L T N +I++E QG++++ + KN I DQ + S N T
Sbjct: 257 LSKTSNNLKTILFENLQGKIDIKSSSTVTKNII---DQPVDDESKKKIKAKNKIVHT--- 310
Query: 351 PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLP 410
PF +L L+LP P+ K ++ + IP+V L +L K++G T + ++ + LP
Sbjct: 311 PFWLLKLELPSMPILKKGLKADDIPRVKLGTLLSKYNGTVSTHAAGNQLRSLKLK--SLP 368
Query: 411 KYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVH 470
Y+I+ RF KNN V + +N L DY P + + L +Y LI NI+H
Sbjct: 369 NYLIIQYDRF-KNNLHVNGIKNGFSVRNRNQTLIDY-----PMKMKLLNREYQLIMNIIH 422
>gi|410832770|gb|AFV92867.1| putative ubiquitinyl hydrolase 1, partial [Eimeria tenella]
Length = 182
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/207 (42%), Positives = 129/207 (62%), Gaps = 29/207 (14%)
Query: 285 WLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNIT 344
WLLN LH D ++ K SII++CFQGE+ V D +E+G
Sbjct: 1 WLLNVLHRDQKDKKTGGSIIHDCFQGEVLVT-----------DAQSEEGR---------- 39
Query: 345 TETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRY 404
+ PFL L LDLPP P+FKD +++N+IP VP+F++L+KFDGET + + R +
Sbjct: 40 ----KTPFLYLTLDLPPAPIFKDSLDRNMIPTVPIFDLLQKFDGETDSGPTP--LQRKKC 93
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+ +LP+Y++L ++RF+KNNFFVEKNPT+V FPVKNL+L++Y+ P E+ + ++Y+L
Sbjct: 94 SLYKLPRYLVLAVKRFSKNNFFVEKNPTIVTFPVKNLDLREYV-HPDALEDNPV-TRYNL 151
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
+ANI H GKP GFY+ V W
Sbjct: 152 VANICHQGKPHDGFYKAQVLHAPTNEW 178
>gi|6841314|gb|AAF29010.1|AF161450_1 HSPC332 [Homo sapiens]
Length = 261
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/230 (43%), Positives = 142/230 (61%), Gaps = 13/230 (5%)
Query: 266 ASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTS-IIYECFQGELEV-VKEIPKNTI 323
SKK F+I Q + V+F+SW LN LHS L TKK I+ + FQG + + K++P +
Sbjct: 2 CSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDL 61
Query: 324 SGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNIL 383
++ + D++ E++ F+ L LDLP PL+KD E+ IIPQVPLFNIL
Sbjct: 62 PAEEK---EQLLHNDEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNIL 115
Query: 384 KKFDGETVTE--VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNL 441
KF+G T E + + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+ N+
Sbjct: 116 AKFNGITEKEYKTYKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNV 174
Query: 442 ELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+L++Y+ ++ + YDLIANIVHDGKP G YR+ V W
Sbjct: 175 DLREYLSEEVQAVHK--NTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKW 222
>gi|47226447|emb|CAG08463.1| unnamed protein product [Tetraodon nigroviridis]
Length = 208
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 99/158 (62%), Gaps = 35/158 (22%)
Query: 94 QRSRLVEVRRD--CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSH 151
+R R+VE +R CPYLDT+NR VLDFDFEK CS+SLS++NVYACL+CGKY+QGRG KSH
Sbjct: 3 RRGRVVEDKRSRHCPYLDTINRSVLDFDFEKLCSISLSHINVYACLICGKYFQGRGLKSH 62
Query: 152 AYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH-------------------- 191
AYTHS++ HHV++NL T K YCLPD YEI D SLEDI +
Sbjct: 63 AYTHSVQFTHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQHIGGLDKQGKL 122
Query: 192 -------------VGLNNIKETDFVNVTIQSLMRVTPL 216
VGLNNIK D+ NV +Q+ V P
Sbjct: 123 YRAYDGTTYLPGIVGLNNIKANDYANVVLQAFCNVPPF 160
>gi|328351655|emb|CCA38054.1| U4/U6.U5 tri-snRNP-associated protein 2 [Komagataella pastoris CBS
7435]
Length = 426
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 123/462 (26%), Positives = 199/462 (43%), Gaps = 134/462 (29%)
Query: 77 EDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYAC 136
E+ E+++D+ G+ +RL +VR Y +T+NR LDFDFEK C V+LS NVY C
Sbjct: 22 ENDGENDNDIGKHANDGETNRLSQVRN--LYFNTINRHKLDFDFEKKCQVTLSKSNVYCC 79
Query: 137 LVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI--NDPSLEDIRH--- 191
LVCGKY QGR S AY HSL+ HH++I+ T K + LP+G+E+ +D SL+DI+
Sbjct: 80 LVCGKYLQGRSPTSQAYLHSLDVNHHLFISFSTLKTFALPEGFEVKDHDGSLDDIKELIS 139
Query: 192 ------------------------------VGLNNIKE-TDFVNVTIQSLMRVTPLRNFF 220
+GLNN+K D+ N + +L + +RN++
Sbjct: 140 PAYTKDQVASLDKQTTTARDIDGNPYRPGFIGLNNVKGFNDYSNTVLLALGHIKAVRNYY 199
Query: 221 LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPV 280
L+ K G R++W ++ F+ +SP E ++ V + SK RF + Q P
Sbjct: 200 LL----NSFKDSFNQELGLFIRRMWSSKQFRPHISPAEIMRVVTEESKNRFNLTQQKTPR 255
Query: 281 EFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDH 340
+F +LL+ + +R + +G+ GG
Sbjct: 256 DFFLFLLHLMPHRVR---------------------------------KSFRGAAGGSS- 281
Query: 341 DNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVA 400
FLM+ L LP +F D PQ+ L ++ +F+ + +P
Sbjct: 282 -----------FLMIPLKLPRTTVFNDET-----PQINLQTLINQFEKD------KP--- 316
Query: 401 RMRYRVTRLPKYMILHMRRFTKNNFFVEK------NPTLVNFPVKNLELKDYIPLPTPKE 454
V P+ ++LH R + + ++ N T++NFP +
Sbjct: 317 -----VKEAPRVLLLHFDR-NQQDIQLDSVSGSAINNTIINFP----------------Q 354
Query: 455 NEKLRSKYDLIANIVHDGKPEGG-----FYRVFVQRKSEELW 491
+ + Y L+ANIV D P Y++ + K + W
Sbjct: 355 DLQFNQTYKLVANIVQDVVPGSSGEDTIAYKIQLYDKGRDQW 396
>gi|254569472|ref|XP_002491846.1| Conserved zinc-finger domain protein involved in pre-mRNA splicing
[Komagataella pastoris GS115]
gi|238031643|emb|CAY69566.1| Conserved zinc-finger domain protein involved in pre-mRNA splicing
[Komagataella pastoris GS115]
Length = 444
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/462 (26%), Positives = 199/462 (43%), Gaps = 134/462 (29%)
Query: 77 EDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYAC 136
E+ E+++D+ G+ +RL +VR Y +T+NR LDFDFEK C V+LS NVY C
Sbjct: 40 ENDGENDNDIGKHANDGETNRLSQVRN--LYFNTINRHKLDFDFEKKCQVTLSKSNVYCC 97
Query: 137 LVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI--NDPSLEDIRH--- 191
LVCGKY QGR S AY HSL+ HH++I+ T K + LP+G+E+ +D SL+DI+
Sbjct: 98 LVCGKYLQGRSPTSQAYLHSLDVNHHLFISFSTLKTFALPEGFEVKDHDGSLDDIKELIS 157
Query: 192 ------------------------------VGLNNIKE-TDFVNVTIQSLMRVTPLRNFF 220
+GLNN+K D+ N + +L + +RN++
Sbjct: 158 PAYTKDQVASLDKQTTTARDIDGNPYRPGFIGLNNVKGFNDYSNTVLLALGHIKAVRNYY 217
Query: 221 LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPV 280
L+ K G R++W ++ F+ +SP E ++ V + SK RF + Q P
Sbjct: 218 LL----NSFKDSFNQELGLFIRRMWSSKQFRPHISPAEIMRVVTEESKNRFNLTQQKTPR 273
Query: 281 EFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDH 340
+F +LL+ + +R + +G+ GG
Sbjct: 274 DFFLFLLHLMPHRVR---------------------------------KSFRGAAGGSS- 299
Query: 341 DNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVA 400
FLM+ L LP +F D PQ+ L ++ +F+ + +P
Sbjct: 300 -----------FLMIPLKLPRTTVFNDET-----PQINLQTLINQFEKD------KP--- 334
Query: 401 RMRYRVTRLPKYMILHMRRFTKNNFFVEK------NPTLVNFPVKNLELKDYIPLPTPKE 454
V P+ ++LH R + + ++ N T++NFP +
Sbjct: 335 -----VKEAPRVLLLHFDR-NQQDIQLDSVSGSAINNTIINFP----------------Q 372
Query: 455 NEKLRSKYDLIANIVHDGKPEGG-----FYRVFVQRKSEELW 491
+ + Y L+ANIV D P Y++ + K + W
Sbjct: 373 DLQFNQTYKLVANIVQDVVPGSSGEDTIAYKIQLYDKGRDQW 414
>gi|50293525|ref|XP_449174.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528487|emb|CAG62144.1| unnamed protein product [Candida glabrata]
Length = 427
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 125/402 (31%), Positives = 177/402 (44%), Gaps = 79/402 (19%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R P+L TVN++ L+FD EK CSVSLS+LNVY CLVCGKY QGR S A++HS+ HH
Sbjct: 8 RAIPFLSTVNQKALNFDLEKVCSVSLSHLNVYCCLVCGKYLQGREPNSPAFSHSVNENHH 67
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKET---------------------- 200
+++ +T++ Y LP+G I ++ +NI T
Sbjct: 68 IFVRFQTQRFYILPEGKIIKPVDYNEVLKTIRDNISPTYEPEAVRLFPVNCTDVSSHTYY 127
Query: 201 ------------DFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHAR 248
DF NV I L + P+R+ FL+ + PLV FG + RK W
Sbjct: 128 NGFIPLYDSSHRDFANVVIVMLSHIPPIRDTFLVGMDTDKF-DPLVKLFGLILRKHWSKN 186
Query: 249 NFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECF 308
+ V E L + K +P F+ LLN L S K++ ++C
Sbjct: 187 LLRAHVLTDELLSYISINYPKLLE---NKDPRVFLLSLLNALISKCPQLKQS----FDCI 239
Query: 309 QGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDV 368
+G ++ S DD D T+ +PF L LDLP +FK
Sbjct: 240 KGRID--------------------SQDIDD-DGKITKRRLLPFTCLTLDLPGDSVFKSS 278
Query: 369 MEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVE 428
I Q + +++KK+DGE T V RYR+ LP Y+ILH RF N+
Sbjct: 279 SVDEAILQTNIEDLMKKYDGEQETLVGN---TIKRYRIAELPDYLILHYHRFDPNS---- 331
Query: 429 KNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVH 470
PVKN + + + PT + L + LI N+VH
Sbjct: 332 ------KQPVKNRK-RAIVTFPT--SIKILDVDFVLIENVVH 364
>gi|401839190|gb|EJT42510.1| SAD1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 448
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/401 (28%), Positives = 185/401 (46%), Gaps = 77/401 (19%)
Query: 104 DCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHV 163
D YL+TV R+ +DFD EK C ++LS LNVY CLVCG YYQGR +KS A+ HS+ HHV
Sbjct: 28 DYAYLETVVREKIDFDSEKICCITLSPLNVYCCLVCGHYYQGRHEKSPAFIHSINENHHV 87
Query: 164 YINLRTEKVYCLPDGYEI-NDPSLEDIR-------------------------------- 190
++NL K Y LP +I ND ++ +
Sbjct: 88 FLNLTNLKFYILPQNIQILNDNKIQLLNGIKYALYPTYCTKDLQSFPKQCFDLSNRAYLN 147
Query: 191 -HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARN 249
+G N D+ + + + + PLR+ FL+ N+ + + R +KIW +
Sbjct: 148 GFIGFTNSAAYDYAHTVLLLISHIAPLRDCFLL--NHFDNEGEFIKRLSICIKKIWSPKL 205
Query: 250 FKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQ 309
FK +S ++F+ + R +P F+ WLLN + S ++K+ SI+ + +
Sbjct: 206 FKHHLSVNDFVTYLKVKEGLDLRF---IDPRFFLLWLLNKICS---SSKQLKSILNQSCK 259
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVM 369
G++++ K ++ E G I ++ + PF +L LDLP FKD
Sbjct: 260 GKVKITK--------IENETEENGP--------IISKVNVKPFWVLTLDLPEFSPFKDGN 303
Query: 370 EKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEK 429
+PQV + +L KF + + A + +TRLP+++I H RF +++
Sbjct: 304 TVENLPQVNIIQLLTKFSNR------QTYYADTLFELTRLPQFLIFHFNRFDRSS----- 352
Query: 430 NPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVH 470
PVKN ++ + E E L +KY L N+VH
Sbjct: 353 -----EHPVKN---RNQTIVEFSSELELLHAKYRLKTNVVH 385
>gi|238878183|gb|EEQ41821.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 242
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 126/233 (54%), Gaps = 48/233 (20%)
Query: 111 VNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTE 170
+NR+VLDFDF K CS +LS+ NVYACL+CGKY++GR S AY H++ H +Y++ TE
Sbjct: 15 INREVLDFDFAKICSQTLSSTNVYACLMCGKYFEGRSPSSPAYKHAVSTNHQMYMSFATE 74
Query: 171 KVYCLPDGYEIN---------DPSLED------------------IRHVGLNNIKETDFV 203
K Y LP E++ +P + +VGLNNIK+ D+
Sbjct: 75 KFYELPQDREVSPVQDVIDYYNPRYTPRDIDLLPRISFDLHKKYLVGYVGLNNIKKNDYA 134
Query: 204 NVTIQSLMRVTPLRNFFLI--PENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQ 261
NV +Q L + P+RN++L+ P N PL G L RK+W FK ++PHEF+
Sbjct: 135 NVVVQVLAHIEPVRNYYLLETPTN------PLNVHLGLLIRKMWSPHLFKSHIAPHEFMN 188
Query: 262 AVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEV 314
+V + SKKRF + + +P F+ WLL N YEC +G++EV
Sbjct: 189 SVTEESKKRFTLE-KGHPKSFLLWLL------------NRGGPYECLRGKVEV 228
>gi|68482089|ref|XP_715062.1| hypothetical protein CaO19.7265 [Candida albicans SC5314]
gi|46436668|gb|EAK96027.1| hypothetical protein CaO19.7265 [Candida albicans SC5314]
Length = 242
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 125/233 (53%), Gaps = 48/233 (20%)
Query: 111 VNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTE 170
+NR+VLDFDF K CS +LS+ NVYACL CGKY++GR S AY H++ H +Y++ TE
Sbjct: 15 INREVLDFDFAKICSQTLSSTNVYACLACGKYFEGRSPSSPAYKHAVSTNHQMYMSFATE 74
Query: 171 KVYCLPDGYEIN---------DPSLED------------------IRHVGLNNIKETDFV 203
K Y LP E++ +P + +VGLNNIK+ D+
Sbjct: 75 KFYELPQDREVSPVQDVIDYYNPRYTPRDIDLLPRISFDLHKKYLVGYVGLNNIKKNDYA 134
Query: 204 NVTIQSLMRVTPLRNFFLI--PENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQ 261
NV +Q L + P+RN++L+ P N PL G L RK+W FK ++PHEF+
Sbjct: 135 NVVVQVLAHIEPVRNYYLLETPTN------PLNVHLGLLIRKMWSPHLFKSHIAPHEFMN 188
Query: 262 AVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEV 314
+V + SKKRF + + +P F+ WLL N YEC +G++EV
Sbjct: 189 SVSEESKKRFTLE-KGHPKSFLLWLL------------NRGGPYECLRGKVEV 228
>gi|365760941|gb|EHN02623.1| Sad1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 448
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 185/401 (46%), Gaps = 77/401 (19%)
Query: 104 DCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHV 163
D YL+TV R+ +DFD EK C ++LS LNVY CLVCG YYQGR +KS A+ HS+ HHV
Sbjct: 28 DYAYLETVVREKIDFDSEKICCITLSPLNVYCCLVCGHYYQGRHEKSPAFIHSINENHHV 87
Query: 164 YINLRTEKVYCLPDGYEI-NDPSLEDIR-------------------------------- 190
++NL K Y LP +I ND ++ +
Sbjct: 88 FLNLTNLKFYILPQNIQILNDNKIQLLNGIKYALYPTYCTKDLQSFPKQCFDLSNRAYLN 147
Query: 191 -HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARN 249
+G + D+ + + + + PLR+ FL+ N+ + + R +KIW +
Sbjct: 148 GFIGFTDSAAYDYAHTVLLLISHIAPLRDCFLL--NHFDNEGEFIKRLSTCIKKIWSPKL 205
Query: 250 FKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQ 309
FK +S ++F+ + R +P F+ WLLN + S ++K+ SI+ + +
Sbjct: 206 FKHHLSVNDFVTYLKVKEGLDLRF---IDPRFFLLWLLNKICS---SSKQLKSILNQSCK 259
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVM 369
G++++ K ++ E G I ++ + PF +L LDLP FKD
Sbjct: 260 GKVKITK--------IENETEENGP--------IISKVNVKPFWVLTLDLPEFSPFKDGN 303
Query: 370 EKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEK 429
+PQV + +L KF + + A + +TRLP+++I H RF +++
Sbjct: 304 TVENLPQVNIIQLLTKFSNR------QTYYADTLFELTRLPQFLIFHFNRFDRSS----- 352
Query: 430 NPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVH 470
PVKN ++ + E E L +KY L N+VH
Sbjct: 353 -----EHPVKN---RNQTVVEFSNELEILHAKYRLKTNVVH 385
>gi|401625923|gb|EJS43903.1| sad1p [Saccharomyces arboricola H-6]
Length = 448
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 120/399 (30%), Positives = 192/399 (48%), Gaps = 77/399 (19%)
Query: 106 PYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYI 165
YL+TV R+ LDFD EK C ++LS LNVY CLVCG++YQGR +KS A+ HS+ HHV++
Sbjct: 30 AYLETVVREKLDFDSEKICCITLSPLNVYCCLVCGRFYQGRHEKSPAFIHSINENHHVFL 89
Query: 166 NLRTEKVYCLPDGYEI-NDPSLE----------------DIRH----------------- 191
NL T K Y LP +I +D ++ D+++
Sbjct: 90 NLTTLKFYILPQNIQILHDDKVQLLNGIKYALYPTYRVKDLQNFPRQCFDLSNRVYLNGF 149
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
+G N D+ + + + + PLR+ FL+ N + + R +KIW + FK
Sbjct: 150 IGFTNTAVYDYAHSVLLIISHMIPLRDHFLL--NDFDDQDEFIKRLSICIKKIWSPKLFK 207
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGE 311
+S +F+ + K+ + V NP + WLLN + S ++K+ SI+ + +G+
Sbjct: 208 HYLSVDDFVTYL--KVKEGLSLSV-VNPRFLLLWLLNKICS---SSKQLKSILNQYCKGK 261
Query: 312 LEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEK 371
+ ++ GN + TE GS +T++ + PF +L LDLP FKD
Sbjct: 262 VRII---------GNKRETE-GS------GTVTSKVNVKPFWVLTLDLPEFSPFKDGNTV 305
Query: 372 NIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNP 431
+ +PQV + +L KF VR + + +LP+++I H RF +++
Sbjct: 306 DNLPQVNITQLLTKFTN------VRTSSVDTVFEIVQLPQFLIFHFNRFDRSS------- 352
Query: 432 TLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVH 470
PVKN ++ + E E L +KY L AN+VH
Sbjct: 353 ---EHPVKN---RNQTIVEFSSELEVLHAKYRLKANVVH 385
>gi|14318527|ref|NP_116660.1| Sad1p [Saccharomyces cerevisiae S288c]
gi|1175976|sp|P43589.1|SAD1_YEAST RecName: Full=Pre-mRNA-splicing factor SAD1; AltName: Full=snRNP
assembly-defective protein 1
gi|836760|dbj|BAA09244.1| unnamed protein product [Saccharomyces cerevisiae]
gi|51012983|gb|AAT92785.1| YFR005C [Saccharomyces cerevisiae]
gi|285811900|tpg|DAA12445.1| TPA: Sad1p [Saccharomyces cerevisiae S288c]
gi|349577920|dbj|GAA23087.1| K7_Sad1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 448
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 117/401 (29%), Positives = 184/401 (45%), Gaps = 83/401 (20%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YL+TV R+ LDFD EK C ++LS LNVY CLVCG YYQGR +KS A+ HS++ HHV++N
Sbjct: 31 YLETVVREKLDFDSEKICCITLSPLNVYCCLVCGHYYQGRHEKSPAFIHSIDENHHVFLN 90
Query: 167 LRTEKVYCLPDGYEI--------------------NDPSLEDI--------------RHV 192
L + K Y LP +I LED +
Sbjct: 91 LTSLKFYMLPQNVQILHDGEVQLLNSIKFAAYPTYCPKDLEDFPRQCFDLSNRTYLNGFI 150
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKG 252
G N D+ + + + + P+R+ FL+ N+ + + R +KIW + FK
Sbjct: 151 GFTNAATYDYAHSVLLLISHMVPVRDHFLL--NHFDNQGEFIKRLSICVKKIWSPKLFKH 208
Query: 253 QVSPHEFLQAVMKASKKRFRIGVQSNPVE---FMSWLLNTLHSDLRNTKKNTSIIYECFQ 309
+S +F+ S + R G+ NP++ F+ WL N + S + K SI+ +
Sbjct: 209 HLSVDDFV------SYLKVREGLNLNPIDPRLFLLWLFNKICSSSNDLK---SILNHSCK 259
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVM 369
G++++ K +N + S+ +T + PF +L LDLP F+D
Sbjct: 260 GKVKIAKV----------ENKPEASES------VTGKVIVKPFWVLTLDLPEFSPFEDGN 303
Query: 370 EKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEK 429
+ +PQ+ + +L KF + + +TRLP+++I H RF +N+
Sbjct: 304 SVDDLPQINITKLLTKFTKSRSSS------TSTVFELTRLPQFLIFHFNRFDRNS----- 352
Query: 430 NPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVH 470
+ PVKN ++ + E E L KY L AN+VH
Sbjct: 353 -----DHPVKN---RNQTLVEFSSELEILHVKYRLKANVVH 385
>gi|151940767|gb|EDN59154.1| conserved zinc-finger domain protein involved in pre-mRNA splicing
[Saccharomyces cerevisiae YJM789]
gi|392299676|gb|EIW10769.1| Sad1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 448
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 117/401 (29%), Positives = 182/401 (45%), Gaps = 83/401 (20%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YL+TV R+ LDFD EK C ++LS LNVY CLVCG YYQGR +KS A+ HS++ HHV++N
Sbjct: 31 YLETVVREKLDFDSEKICCITLSPLNVYCCLVCGHYYQGRHEKSPAFIHSIDENHHVFLN 90
Query: 167 LRTEKVYCLPDGYEI--------------------NDPSLEDI--------------RHV 192
L + K Y LP +I LED +
Sbjct: 91 LTSLKFYMLPQNVQILHDGEVQLLNSIKFAAYPTYCPKDLEDFPRQCFDLSNRTYLNGFI 150
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKG 252
G N D+ + + + + P+R+ FL+ N+ + + R +KIW + FK
Sbjct: 151 GFTNAATYDYAHSVLLLISHMVPVRDHFLL--NHFDNQGEFIKRLSICVKKIWSPKLFKH 208
Query: 253 QVSPHEFLQAVMKASKKRFRIGVQSNPVE---FMSWLLNTLHSDLRNTKKNTSIIYECFQ 309
+S +F+ S + R G+ NP++ F+ WL N + S K SI+ +
Sbjct: 209 HLSVDDFV------SYLKVREGLNLNPIDPRLFLLWLFNKICSSSNELK---SILNHSCK 259
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVM 369
G++++ K K S +++T + PF +L LDLP F+D
Sbjct: 260 GKVKIAKVESKPEAS----------------ESVTGKVIVKPFWVLTLDLPEFSPFEDGN 303
Query: 370 EKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEK 429
+ +PQ+ + +L KF + + +TRLP+++I H RF +N+
Sbjct: 304 SVDDLPQINITKLLTKFTKSRSSS------TSTVFELTRLPQFLIFHFNRFDRNS----- 352
Query: 430 NPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVH 470
+ PVKN ++ + E E L KY L AN+VH
Sbjct: 353 -----DHPVKN---RNQTLVEFSSELEILHVKYRLKANVVH 385
>gi|365765846|gb|EHN07351.1| Sad1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 448
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 117/401 (29%), Positives = 181/401 (45%), Gaps = 83/401 (20%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YL+TV R+ LDFD EK C ++LS LNVY CLVCG YYQGR +KS A+ HS++ HHV++N
Sbjct: 31 YLETVVREKLDFDSEKICCITLSPLNVYCCLVCGNYYQGRHEKSPAFIHSIDENHHVFLN 90
Query: 167 LRTEKVYCLPDGYEI--------------------NDPSLEDI--------------RHV 192
L + K Y LP +I LED +
Sbjct: 91 LTSLKFYMLPQNVQILHDGEVQLLNSIKFAAYPTYCPKDLEDFPRQCFDLSNRTYLNGFI 150
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKG 252
G N D+ + + + + P+R+ FL+ N+ + + R +KIW + FK
Sbjct: 151 GFTNAATYDYAHSVLLLISHMVPVRDHFLL--NHFDNQGEFIKRLSICVKKIWSPKLFKX 208
Query: 253 QVSPHEFLQAVMKASKKRFRIGVQSNPVE---FMSWLLNTLHSDLRNTKKNTSIIYECFQ 309
+S +FL S + R G+ NP++ F+ WL N + K SI+ +
Sbjct: 209 HLSVDDFL------SYLKVREGLNLNPIDPRLFLLWLFNKICXSSNELK---SILNHSCK 259
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVM 369
G++++ K K S +++T + PF +L LDLP F+D
Sbjct: 260 GKVKIAKVESKPEAS----------------ESVTGKVIVKPFWVLTLDLPEFSPFEDGN 303
Query: 370 EKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEK 429
+ +PQ+ + +L KF + + +TRLP+++I H RF +N+
Sbjct: 304 SVDDLPQINITKLLTKFTKSRSSS------TSTVFELTRLPQFLIFHFNRFDRNS----- 352
Query: 430 NPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVH 470
+ PVKN ++ + E E L KY L AN+VH
Sbjct: 353 -----DHPVKN---RNQTLVEFSSELEILHVKYRLKANVVH 385
>gi|313246467|emb|CBY35373.1| unnamed protein product [Oikopleura dioica]
Length = 492
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 72/157 (45%), Positives = 93/157 (59%), Gaps = 39/157 (24%)
Query: 105 CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVY 164
CPYLDT++R +LDFDFEK CSVSLS+ NVY CL+C KY+QGRG+ +HAY H+L+ H+VY
Sbjct: 87 CPYLDTIHRAILDFDFEKLCSVSLSHNNVYCCLICSKYFQGRGKGTHAYLHALDCKHYVY 146
Query: 165 INLRTEKVYCLPDGYEINDPSLEDIRH--------------------------------- 191
+NL K YCLPD YEI DPSL+DI +
Sbjct: 147 LNLHNAKFYCLPDNYEIVDPSLDDILYQLNPMFTQEDLKELHYYEEVMTKKLVAFRRNGS 206
Query: 192 ------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI 222
+G+NNIK D++NV IQ L +V R+ FL+
Sbjct: 207 KYWTGLIGMNNIKHNDYINVVIQGLAQVPKFRDHFLV 243
>gi|190406577|gb|EDV09844.1| hypothetical protein SCRG_05551 [Saccharomyces cerevisiae RM11-1a]
gi|256268857|gb|EEU04209.1| Sad1p [Saccharomyces cerevisiae JAY291]
gi|259146195|emb|CAY79454.1| Sad1p [Saccharomyces cerevisiae EC1118]
gi|323337778|gb|EGA79021.1| Sad1p [Saccharomyces cerevisiae Vin13]
gi|323355182|gb|EGA87009.1| Sad1p [Saccharomyces cerevisiae VL3]
Length = 448
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 116/401 (28%), Positives = 183/401 (45%), Gaps = 83/401 (20%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YL+TV R+ LDFD EK C ++LS LNVY CLVCG YYQGR +KS A+ HS++ HHV++N
Sbjct: 31 YLETVVREKLDFDSEKICCITLSPLNVYCCLVCGNYYQGRHEKSPAFIHSIDENHHVFLN 90
Query: 167 LRTEKVYCLPDGYEI--------------------NDPSLEDI--------------RHV 192
L + K Y LP +I LED +
Sbjct: 91 LTSLKFYMLPQNVQILHDGEVQLLNSIKFAAYPTYCPKDLEDFPRQCFDLSNRTYLNGFI 150
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKG 252
G N D+ + + + + P+R+ FL+ N+ + + R +KIW + FK
Sbjct: 151 GFTNAATYDYAHSVLLLISHMVPVRDHFLL--NHFDNQGEFIKRLSICVKKIWSPKLFKH 208
Query: 253 QVSPHEFLQAVMKASKKRFRIGVQSNPVE---FMSWLLNTLHSDLRNTKKNTSIIYECFQ 309
+S +FL S + R G+ NP++ F+ WL N + ++ + SI+ +
Sbjct: 209 HLSVDDFL------SYLKVREGLNLNPIDPRLFLLWLFNKI---CLSSNELKSILNHSCK 259
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVM 369
G++++ K K S +++T + PF +L LDLP F+D
Sbjct: 260 GKVKIAKVESKPEAS----------------ESVTGKVIVKPFWVLTLDLPEFSPFEDGN 303
Query: 370 EKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEK 429
+ +PQ+ + +L KF + + +TRLP+++I H RF +N+
Sbjct: 304 SVDDLPQINITKLLTKFTKSRSSS------TSTVFELTRLPQFLIFHFNRFDRNS----- 352
Query: 430 NPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVH 470
+ PVKN ++ + E E L KY L AN+VH
Sbjct: 353 -----DHPVKN---RNQTLVEFSSELEILHVKYRLKANVVH 385
>gi|367007818|ref|XP_003688638.1| hypothetical protein TPHA_0P00460 [Tetrapisispora phaffii CBS 4417]
gi|357526948|emb|CCE66204.1| hypothetical protein TPHA_0P00460 [Tetrapisispora phaffii CBS 4417]
Length = 482
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 112/410 (27%), Positives = 194/410 (47%), Gaps = 83/410 (20%)
Query: 106 PYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYI 165
P L ++N++ LDFD E+ CS++ +N+NVY CLVCGKY++GR + S A+ HS+ H+++I
Sbjct: 45 PLLRSINKKKLDFDAERICSITATNVNVYCCLVCGKYFKGRNEGSPAFLHSIGENHNIFI 104
Query: 166 NLRTEKVYCLPDGYEINDPS---------LEDIRHV-----GLNNIKE------------ 199
N+ K++ LP + D ++DI++ L +IK+
Sbjct: 105 NMTNLKLFNLPANIPLEDAVTLNLTEQKIIDDIKYAINPQFTLESIKDFPIICKDVDNEE 164
Query: 200 ---------------TDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKI 244
D + + L + +R++FL+ +N + +P + L ++I
Sbjct: 165 YLNGFVGISYNANASNDSIASIVMMLTHMDDIRDYFLLDKNLTN-DTPFETKLRLLMKRI 223
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSII 304
W + FK V+ +E L ++ R ++ + + +
Sbjct: 224 WSPKLFKSHVAMNELLSFILIDPSFSNR--------------------NINDPRLLLLSL 263
Query: 305 YECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPL 364
+ +K+I I G T + S I + + MPF +L LDLP P+
Sbjct: 264 INSNINISKPLKDIIDTNIRGQVLVTSEKSVANSKESKI--KKTIMPFSLLSLDLPDVPV 321
Query: 365 FKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRF-TKN 423
FKD M+ N +PQ+ L +L KF+G +TE ++ + ++++ LP+Y+ILH RF +K
Sbjct: 322 FKDGMDTNALPQIKLSEMLMKFNG--ITEHIQSKELKKKFKLESLPRYLILHFNRFDSKT 379
Query: 424 NFFV-EKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG 472
N V ++N TLV FP +ELK ++KY LI+N+VH+
Sbjct: 380 NTPVKDRNQTLVEFPTL-MELK--------------KTKYRLISNLVHEA 414
>gi|195174704|ref|XP_002028112.1| GL21349 [Drosophila persimilis]
gi|194115852|gb|EDW37895.1| GL21349 [Drosophila persimilis]
Length = 170
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/107 (63%), Positives = 82/107 (76%), Gaps = 7/107 (6%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR +LDFDFEK CSVSL+ +NVYACLVCGKY+QGRG +HAYTHS+ HH
Sbjct: 36 RVCPYLDTINRNLLDFDFEKLCSVSLTRINVYACLVCGKYFQGRGTNTHAYTHSVGEAHH 95
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHVGLN------NIKETDFV 203
V++NL T + YCLPD YEI D SL+DI++V LN I + DFV
Sbjct: 96 VFLNLHTLRFYCLPDNYEIIDSSLDDIKYV-LNPTFTKQEISKLDFV 141
>gi|323309248|gb|EGA62469.1| Sad1p [Saccharomyces cerevisiae FostersO]
Length = 358
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 162/355 (45%), Gaps = 70/355 (19%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YL+TV R+ LDFD EK C ++LS LNVY CLVCG YYQGR +KS A+ HS++ HHV++N
Sbjct: 31 YLETVVREKLDFDSEKICCITLSPLNVYCCLVCGNYYQGRHEKSPAFIHSIDENHHVFLN 90
Query: 167 LRTEKVYCLPDGYEI--------------------NDPSLEDI--------------RHV 192
L + K Y LP +I LED +
Sbjct: 91 LTSLKFYMLPQNVQILHDGEVQLLNSIKFAAYPTYCPKDLEDFPRQCFDLSNRTYLNGFI 150
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKG 252
G N D+ + + + + P+R+ FL+ N+ + + R +KIW + FK
Sbjct: 151 GFTNAATYDYAHSVLLLISHMVPVRDHFLL--NHFDNQGEFIKRLSICVKKIWSPKLFKH 208
Query: 253 QVSPHEFLQAVMKASKKRFRIGVQSNPVE---FMSWLLNTLHSDLRNTKKNTSIIYECFQ 309
+S +FL S + R G+ NP++ F+ WL N + K SI+ +
Sbjct: 209 HLSVDDFL------SYLKVREGLNLNPIDPRLFLLWLFNKICXSSNXLK---SILNHSCK 259
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVM 369
G++++ K K S +++T + PF +L LDLP F+D
Sbjct: 260 GKVKIAKVEXKPEAS----------------ESVTGKVIVKPFWVLTLDLPEFSPFEDGN 303
Query: 370 EKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNN 424
+ +PQ+ + +L KF + + +TRLP+++I H RF +N+
Sbjct: 304 SVDDLPQINITKLLTKFTKSRSSS------TSTVFELTRLPQFLIFHFNRFDRNS 352
>gi|47226448|emb|CAG08464.1| unnamed protein product [Tetraodon nigroviridis]
Length = 238
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/148 (49%), Positives = 99/148 (66%), Gaps = 5/148 (3%)
Query: 346 ETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE--VVRPHVARMR 403
+ S FL L LDLP PL+KD E+ IIPQVPLFNIL KF+G T E + + + R
Sbjct: 54 QMSESTFLFLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGNTEKEYKTYKENFLK-R 112
Query: 404 YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYD 463
+++T+LP Y++ ++RFTKNNFFVEKNPT+VNFP+ N++L++Y L + + + YD
Sbjct: 113 FQLTKLPPYLVFCIKRFTKNNFFVEKNPTIVNFPITNVDLREY--LTEEAQVTEKNTTYD 170
Query: 464 LIANIVHDGKPEGGFYRVFVQRKSEELW 491
L+ANIVHDGKP G YR+ V W
Sbjct: 171 LVANIVHDGKPTEGAYRIHVLHHGTGKW 198
>gi|366990323|ref|XP_003674929.1| hypothetical protein NCAS_0B04730 [Naumovozyma castellii CBS 4309]
gi|342300793|emb|CCC68557.1| hypothetical protein NCAS_0B04730 [Naumovozyma castellii CBS 4309]
Length = 441
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 190/401 (47%), Gaps = 99/401 (24%)
Query: 108 LDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINL 167
+ T+N + L+FDF+K CSV+LS +VY CLVCGKY+QGR ++S A+ HS+++ HH++IN+
Sbjct: 45 VSTINLKKLNFDFKKVCSVTLSPTHVYCCLVCGKYFQGRNERSPAFVHSIDSKHHIFINM 104
Query: 168 RTEKVYCLPDGYEI---NDPSLEDIRHVGL-----NNIKE-------------------- 199
+ + + LP+ +I +D L+ IR+ + IKE
Sbjct: 105 NSLEYFELPENIQIEAVDDKILKVIRYAICPTYSNDAIKEFPLECIDTYGKVYANGFIGV 164
Query: 200 -------TDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKG 252
+ F+NV + + + P+RNFFL+ + ++ L+ + L RKIW +
Sbjct: 165 TDSSNNHSAFINVVLMLIGHINPIRNFFLLTD--LQGENLLLQKLSILMRKIWSPHLIRN 222
Query: 253 QVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGEL 312
+ EFL ++ + + + +P F+ WL+N L + K+ ++ C QG++
Sbjct: 223 YICTDEFLDFLVINKQLQ---KLPKDPKIFLLWLINNLAIKSKILKQ--QLMLHC-QGKI 276
Query: 313 EVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKN 372
I N++ T +PF L LDL P+F+ + N
Sbjct: 277 ---------VIKMNNKKT-------------------IPFWNLTLDL---PVFRS--DFN 303
Query: 373 IIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPT 432
+PQV + ++LKK+D E +Y + +LP ++ILH RF + F KN
Sbjct: 304 AVPQVKIGDLLKKYDDED----------SEKYTLKQLPHFLILHFNRFDAKSEFPIKN-- 351
Query: 433 LVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGK 473
+N L ++ L T + + Y LI+NI+H K
Sbjct: 352 ------RNQTLVEFNELLTIRN-----TNYKLISNIIHSVK 381
>gi|311252223|ref|XP_003124988.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Sus
scrofa]
Length = 213
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/157 (47%), Positives = 102/157 (64%), Gaps = 8/157 (5%)
Query: 337 GDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE--V 394
D++ E++ F+ L LDLP PL+KD E+ IIPQVPLFNIL KF+G T E
Sbjct: 24 NDEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGITEKEYKT 80
Query: 395 VRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKE 454
+ + + R+++T+LP Y+I ++RFTKNNFFVEKNPT+VNFP+ N++L++Y L +
Sbjct: 81 YKENFLK-RFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREY--LSEEVQ 137
Query: 455 NEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+ YDLIANIVHDGKP G YR+ V W
Sbjct: 138 AVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKW 174
>gi|198413147|ref|XP_002123896.1| PREDICTED: similar to ubiquitin specific protease 39 [Ciona
intestinalis]
Length = 215
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/154 (47%), Positives = 99/154 (64%), Gaps = 7/154 (4%)
Query: 341 DNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVA 400
D + + PFL L LDLP PL+KD +E NIIPQVPL +L KF+G T E +
Sbjct: 25 DEYQEKMEKSPFLYLALDLPAAPLYKDELEHNIIPQVPLATLLAKFNGMTEKEYKGKRDS 84
Query: 401 RM-RYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLR 459
M R+ +TRLP Y+I +++RFTKN FF+EKNPT+VNFPV N++L++ + + +
Sbjct: 85 TMKRFEITRLPPYLIFYIKRFTKNLFFIEKNPTIVNFPVTNIDLEELV----AADADVPH 140
Query: 460 SKYDLIANIVHDGKP-EG-GFYRVFVQRKSEELW 491
+ YDL+ANIVHDG P EG G YRV + + W
Sbjct: 141 TCYDLMANIVHDGDPNEGKGSYRVHILHQGSNQW 174
>gi|365983318|ref|XP_003668492.1| hypothetical protein NDAI_0B02140 [Naumovozyma dairenensis CBS 421]
gi|343767259|emb|CCD23249.1| hypothetical protein NDAI_0B02140 [Naumovozyma dairenensis CBS 421]
Length = 438
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 177/396 (44%), Gaps = 88/396 (22%)
Query: 108 LDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINL 167
L TVN LDF EK CSV+LS LNVY CLVCGKY+QG +KS A+ HS+ H+++ NL
Sbjct: 34 LQTVNLHKLDFGLEKICSVTLSKLNVYCCLVCGKYFQGHNEKSPAFLHSINNNHNLFFNL 93
Query: 168 RTEKVYCLPDGYEI---NDPSLEDIR------------------------------HVGL 194
T LPD I ++P LE I+ V +
Sbjct: 94 YTSDFIKLPDAILIEGDHEPLLESIKAAFFPKYSHEEIVAFPKKCKDLNKRLYVNGFVRV 153
Query: 195 NNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQV 254
N D +NV + L VTPLR++ L+ + +S V ++ RKIW FK V
Sbjct: 154 TNSSSLDHLNVILLLLSHVTPLRDWLLLSD--VSAESTFVQGLSNIVRKIWSPYLFKNHV 211
Query: 255 SPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEV 314
S EF + + + ++++P + + W+LN + D + K+ I++E QG++
Sbjct: 212 SADEFADFL---TVQNLINKLRNDPADLLIWMLNFMAFDSKALKR---ILHESCQGKINF 265
Query: 315 VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNII 374
NT K S +PF L LDLP + K+ N +
Sbjct: 266 --------------NTRKTSQI-------------LPFWKLSLDLPVNSILKEGQNANNL 298
Query: 375 PQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLV 434
V L ++L+KF + + Y + +LP +++LH RF +F E
Sbjct: 299 HHVDLHDLLRKFTS-------KGNSNSKNYSLEKLPHFLVLHYNRF---DFKSE------ 342
Query: 435 NFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVH 470
+PVKN ++ I + P + +Y L AN+VH
Sbjct: 343 -YPVKN---RNQILVQYPSVLKLKEVEYVLQANVVH 374
>gi|371536781|gb|AEX33653.1| peptidase [Uromyces hobsonii]
Length = 97
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 57/64 (89%), Positives = 63/64 (98%)
Query: 129 SNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLED 188
SNLNVYACLVCGKYYQGRG+KSHAYTHSLEAGHHVYINLR+EKV+CLPDGYE+ DPSL+D
Sbjct: 6 SNLNVYACLVCGKYYQGRGRKSHAYTHSLEAGHHVYINLRSEKVFCLPDGYEVIDPSLDD 65
Query: 189 IRHV 192
IR+V
Sbjct: 66 IRYV 69
>gi|429328899|gb|AFZ80658.1| ubiquitin carboxyl-terminal hydrolase, putative [Babesia equi]
Length = 161
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 65/138 (47%), Positives = 94/138 (68%), Gaps = 5/138 (3%)
Query: 354 MLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYM 413
ML L++P P+FKD E+NIIPQV +F++LKK+DG T + V +Y + RLP+Y+
Sbjct: 1 MLMLEVPDAPIFKDSHERNIIPQVSIFDLLKKYDGNTESYVSG---KIQKYSIWRLPEYL 57
Query: 414 ILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGK 473
IL ++RF KN +F EKNPT+V FP+KNL+L +Y+ +P++ E R YDL+ NI H+GK
Sbjct: 58 ILIVKRFFKNEYFEEKNPTIVAFPMKNLDLSEYVDEDSPEKGENAR--YDLVCNICHEGK 115
Query: 474 PEGGFYRVFVQRKSEELW 491
P+ G ++VFV W
Sbjct: 116 PKDGSFKVFVFHPPSSNW 133
>gi|430813518|emb|CCJ29131.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 203
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 57/99 (57%), Positives = 72/99 (72%), Gaps = 13/99 (13%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQ-------------GRGQKSHAY 153
YLDTV+R LDFDFEK CS+SLSNLNVYACL+CGKY+Q GRG+ S+AY
Sbjct: 88 YLDTVDRTRLDFDFEKLCSISLSNLNVYACLICGKYFQGLFLFFCSLLNELGRGRSSYAY 147
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV 192
HSL+ HHVYINL + K+Y LP+ YE+ +L+DI++V
Sbjct: 148 FHSLDEAHHVYINLHSLKIYVLPESYEVRTNALDDIKYV 186
>gi|452818584|gb|EME25856.1| ubiquitin thiolesterase/ zinc ion binding protein [Galdieria
sulphuraria]
Length = 197
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 97/152 (63%), Gaps = 4/152 (2%)
Query: 341 DNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF-DGETVTEVVRPHV 399
D I + FL L L+LPP PLFKD +E+N+IPQV L ++L +F E +V H
Sbjct: 20 DIIKKDHKSSQFLFLSLELPPMPLFKDSLERNMIPQVSLSSLLSRFVQQELHHDVQTGHF 79
Query: 400 ARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLR 459
RYR+ RLP +IL M+RF K+NF EKN ++V+FP+++L++ +Y+ + P E
Sbjct: 80 --YRYRLRRLPYCLILVMKRFAKSNFVWEKNISIVHFPIRDLDMTEYLSMSCPG-IESNG 136
Query: 460 SKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
YDL A ++HDGKP+GG YR +++ K+ + W
Sbjct: 137 VVYDLTAVVIHDGKPKGGTYRCYIRHKASDSW 168
>gi|410076064|ref|XP_003955614.1| hypothetical protein KAFR_0B01800 [Kazachstania africana CBS 2517]
gi|372462197|emb|CCF56479.1| hypothetical protein KAFR_0B01800 [Kazachstania africana CBS 2517]
Length = 436
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 115/413 (27%), Positives = 175/413 (42%), Gaps = 115/413 (27%)
Query: 79 KDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLV 138
K EDD +G Q + R +E D Y+D +N + LDFD K CSV+LS +NVY CL
Sbjct: 3 KTSREDD--DGSVQDLKKRKIE--SDHEYIDQINVKKLDFDQNKVCSVTLSPINVYCCLQ 58
Query: 139 CGKYYQGRGQKSHAYTHSL-EAGHHVYINLRTEKVYCLPDGYEI----NDPSLEDIR--- 190
CGK++QGRG +S A+ HS+ E+ H + INL T +Y LPD EI DP + IR
Sbjct: 59 CGKFFQGRGIQSPAFQHSIDESSHKLLINLNTTSIYILPDNKEILKDSTDPLVRKIRFAI 118
Query: 191 -----------------------HVGLNNIKETDFVNVTIQS-------------LM--R 212
+G+NN +DFVN I + LM
Sbjct: 119 NPQYTREDIVQLSQRVSNHYVCGFIGINN-NNSDFVNSRIATGKSIEIDHINSALLMFSH 177
Query: 213 VTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNF-KGQVSPHEFLQAVMKASKKRF 271
+ P+R+ L+ ++ + L + + +KIW K +S E + +M F
Sbjct: 178 IFPVRDHLLLLDHKDTKINELSRKISLIVKKIWSPNLISKYHISTIEVITYLMIHEPHLF 237
Query: 272 RIGVQSNPVEFMSWLLNTLHSDLRNTKKNT---SIIYECFQGELEVVKEIPKNTISGNDQ 328
+ NP ++WLLN L TKK+ S++ + QG +E+
Sbjct: 238 K---NHNPKLMLTWLLNYL------TKKDKDIGSVLKKNLQGTIEM-------------- 274
Query: 329 NTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNIL-KKFD 387
+ + F L + LPP +FKD N PQV L ++ KF
Sbjct: 275 -----------------RSKHINFWHLTVSLPPITVFKDGNNVNKFPQVKLETLINNKFL 317
Query: 388 GETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKN 440
Y++ +LP Y+I+ + R +N + + FP+K+
Sbjct: 318 SNNA-----------EYKLEKLPNYLIISIDR--------SENDSTLKFPIKD 351
>gi|297734726|emb|CBI16960.3| unnamed protein product [Vitis vinifera]
Length = 87
Score = 118 bits (296), Expect = 7e-24, Method: Composition-based stats.
Identities = 52/86 (60%), Positives = 68/86 (79%), Gaps = 1/86 (1%)
Query: 211 MRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA-SKK 269
MRV PLRNFFLI ENY+HC SPL+HRF +LTR+ WH N + ++ + FL AV KA S
Sbjct: 1 MRVIPLRNFFLILENYKHCNSPLIHRFQELTRRYWHPWNCRIKLKSYTFLNAVTKATSNN 60
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDLR 295
R+++GV+S+P+EFM+WLLN+LH DLR
Sbjct: 61 RYQMGVESDPIEFMAWLLNSLHVDLR 86
>gi|159478228|ref|XP_001697206.1| hypothetical protein CHLREDRAFT_119899 [Chlamydomonas reinhardtii]
gi|158274680|gb|EDP00461.1| predicted protein [Chlamydomonas reinhardtii]
Length = 124
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/99 (58%), Positives = 70/99 (70%), Gaps = 13/99 (13%)
Query: 406 VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLP------------TPK 453
+TRLP+Y+ LH RRFTKNNFF+EKNPTLVNFPVKNLEL+D +PLP P
Sbjct: 1 ITRLPRYLALHYRRFTKNNFFIEKNPTLVNFPVKNLELRDVLPLPERPAAAGGAAAGAPH 60
Query: 454 ENE-KLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+ L SKYDL+AN+VHDGK G YRV V R+ E++W
Sbjct: 61 ADAFALSSKYDLVANLVHDGKAGSGSYRVHVHRRVEDIW 99
>gi|56759084|gb|AAW27682.1| SJCHGC05944 protein [Schistosoma japonicum]
Length = 250
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/175 (41%), Positives = 98/175 (56%), Gaps = 19/175 (10%)
Query: 326 NDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKK 385
N + EK S D T S F L DLPPPPL+ D ++NIIPQV L +L K
Sbjct: 4 NMTDEEKASLA--DSPEYMTSISDTNFFYLTCDLPPPPLYLDEFKENIIPQVSLATLLSK 61
Query: 386 FDG--ETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLEL 443
F+G E + R R R+ + RLP Y+IL+M+RF KN F +EKNPT+VNFP+K+++
Sbjct: 62 FNGIAEKEYKTHRDSTLR-RFELRRLPPYLILYMKRFVKNIFTLEKNPTIVNFPIKSIDF 120
Query: 444 KDYIPLPTPKENEKLRSK-----YDLIANIVHDGKPE--GGFYRVFVQRKSEELW 491
D + + + R+K YDLIANIVHDG P G +R+ + + W
Sbjct: 121 GDLL-------SSEFRAKHRYTTYDLIANIVHDGPPTPGSGTHRIHLLHRGTGKW 168
>gi|238578223|ref|XP_002388644.1| hypothetical protein MPER_12308 [Moniliophthora perniciosa FA553]
gi|215450114|gb|EEB89574.1| hypothetical protein MPER_12308 [Moniliophthora perniciosa FA553]
Length = 169
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 64/84 (76%), Gaps = 4/84 (4%)
Query: 90 YGQGQRSRLVE-VRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQ 148
YG+G +VE V+ YLDT+NR VLDFDFEK CSVSLSN+N Y CLVCGKY+QGRG+
Sbjct: 41 YGEGD---VVEPVKASDLYLDTINRAVLDFDFEKVCSVSLSNINTYGCLVCGKYFQGRGR 97
Query: 149 KSHAYTHSLEAGHHVYINLRTEKV 172
KS+AY HS+ HHV+INL T K
Sbjct: 98 KSYAYAHSIHEDHHVFINLETTKA 121
>gi|440803653|gb|ELR24536.1| ubiquitin specific protease 39 and snrnp assembly factor, putative,
partial [Acanthamoeba castellanii str. Neff]
Length = 262
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/134 (45%), Positives = 73/134 (54%), Gaps = 30/134 (22%)
Query: 61 SGAKVGQNGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDF 120
+GA+ + R DDE + A G V R CPYLDTVNR +LDFDF
Sbjct: 32 AGAEGSHSKRPKHVDDEQDESRRGAHATG----------AVVRRCPYLDTVNRALLDFDF 81
Query: 121 EKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYE 180
EK C RG+ SHAY HSL+A HHV+INL EKVYCLPDGYE
Sbjct: 82 EKVCR--------------------RGRGSHAYYHSLQADHHVFINLLNEKVYCLPDGYE 121
Query: 181 INDPSLEDIRHVGL 194
+ DPSL+DI+ + L
Sbjct: 122 VQDPSLDDIKVIAL 135
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 29/40 (72%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKS 231
VGLNNIK D++N + SL V PLR+FFL+ ENYR ++
Sbjct: 197 VGLNNIKNNDYINAVVHSLAHVRPLRDFFLLEENYRDVRT 236
>gi|323348778|gb|EGA83018.1| Sad1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 219
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 90/191 (47%), Gaps = 36/191 (18%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YL+TV R+ LDFD EK C ++LS LNVY CLVCG YYQGR +KS A+ HS++ HHV++N
Sbjct: 31 YLETVVREKLDFDSEKICCITLSPLNVYCCLVCGNYYQGRHEKSPAFIHSIDENHHVFLN 90
Query: 167 LRTEKVYCLPDGYEI--------------------NDPSLEDI--------------RHV 192
L + K Y LP +I LED +
Sbjct: 91 LTSLKFYMLPQNVQILHDGEVQLLNSIKFAAYPTYCPKDLEDFPRQCFDLSNRTYLNGFI 150
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKG 252
G N D+ + + + + P+R+ FL+ N+ + + R +KIW + FK
Sbjct: 151 GFTNAATYDYAHSVLLLISHMVPVRDHFLL--NHFDNQGEFIKRLSICVKKIWSPKLFKX 208
Query: 253 QVSPHEFLQAV 263
+S F +
Sbjct: 209 HLSVDXFFILI 219
>gi|403215501|emb|CCK70000.1| hypothetical protein KNAG_0D02510 [Kazachstania naganishii CBS
8797]
Length = 419
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 159/366 (43%), Gaps = 98/366 (26%)
Query: 116 LDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSL-EAGHHVYINLRTEKVYC 174
LDFD K CSV + L VY CL CGK+ QGRG +S + H++ + H +++NLR KVY
Sbjct: 34 LDFDQVKRCSVKCTPLEVYCCLQCGKFLQGRGARSPCFLHAVNNSRHSMFMNLRDAKVYE 93
Query: 175 LPDGYEINDP--------------SLEDIR--------------------HVGLNNIKET 200
LP E++ E R VG+ +
Sbjct: 94 LPLNREVDTARDTLLQRLQLALQPQFESDRLQAFPQNCTDLVAGKQYTNGFVGITG--KP 151
Query: 201 DFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFL 260
VN + L +TP+R+ L+ + + LV + +++W +G VSP E++
Sbjct: 152 QLVNYIVILLAHITPVRDNLLL---CKQQEGTLVGQVTQFVQRLWSTTLLRGHVSPEEWV 208
Query: 261 QAVMKASKKRFRIGVQSNPVEFMSWLLNTL-HSDLRNTKKNTSIIYECFQGELEVVKEIP 319
+ S+ + ++P +WL+N L S L++T + +GE+EV
Sbjct: 209 SYLQVHSRDWLDV---TDPKLAFNWLINQLIKSPLQDT------LASACRGEIEV----- 254
Query: 320 KNTISGNDQNTEKGSDGGDDHDNITTETSR-MPFLMLGLDLP--PPPLFKDVMEKNIIPQ 376
+TSR +PF + LDLP +FKD E N +PQ
Sbjct: 255 -------------------------KQTSRVVPFWNVTLDLPTSSATIFKDGREVNDLPQ 289
Query: 377 VPLFNILK-KFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNF---FVEKNPT 432
+ L +L+ KFD +T P++ R LP+++I++ R + ++N T
Sbjct: 290 IQLSTLLQNKFDSDTA-----PYMFR------SLPEHLIVYYNRHSGARLPFPVRDRNQT 338
Query: 433 LVNFPV 438
+V+FP+
Sbjct: 339 MVDFPL 344
>gi|154415994|ref|XP_001581020.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
gi|121915244|gb|EAY20034.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
Length = 425
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/408 (21%), Positives = 184/408 (45%), Gaps = 80/408 (19%)
Query: 111 VNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTE 170
++R V+ FD + C S+ N++ CL CG+ + G S H A H + +NL+T
Sbjct: 18 IDRTVIRFDQDMICCQSMVRENLFMCLECGQIFAGGTVGSPLLLHYGRAAHTIALNLKTN 77
Query: 171 KVYCLPDGYEIND------------PSLED-IRHVGLNNIKETDFVN------------- 204
KV LP+ E++D P+ D + ++ L KE +N
Sbjct: 78 KVVMLPNYQELSDYKEISDIQFASRPTYTDKVINLILQKQKEGIKINNKLFYPGQLLFDL 137
Query: 205 --------VTIQSLMRVTPLRNFFLI-PENYRHCKSPLVHRFGDLTRKIWHARNFKGQVS 255
I+ + R+TPLR+F L+ P++ +PL + ++ ++ F+ +S
Sbjct: 138 RSKQSSQLSVIRFISRITPLRDFLLLNPQS-----TPLANELSRYFKQAFNPYGFRDHIS 192
Query: 256 PHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVV 315
P L+++ S ++ + + NPVE+ +++L L+ ++ I+ + G+L V
Sbjct: 193 PFTLLRSIQTLSNDKYNVQNEVNPVEYFTFILQLLNQEIPG-----KIVSKLICGKLNFV 247
Query: 316 KEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEK-NII 374
+ D++ + + + + + L+ PL+++ +EK II
Sbjct: 248 E---------------------DNNGDCNYTSKIINYWSIPLEPYECPLYRNGLEKEKII 286
Query: 375 PQVPLFNILKKFDGE--TVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEK-NP 431
PQ L ++L++++G TV + + + + + + +++ +++ R +F +EK N
Sbjct: 287 PQATLESLLERYNGTQITVKSIGNRQIVQRKMSIHKSSEFLWINVNRIRPASFGLEKLNL 346
Query: 432 TLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFY 479
+V+ +++L Y + +KYDL++ I H+G G Y
Sbjct: 347 HIVHSDDGSIDLSKY----------GVNAKYDLVSVISHEGDVNSGVY 384
>gi|207345663|gb|EDZ72415.1| YFR005Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 393
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 155/365 (42%), Gaps = 85/365 (23%)
Query: 144 QGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEIND-------------------- 183
+GR +KS A+ HS++ HHV++NL + K Y LP +I
Sbjct: 13 RGRHEKSPAFIHSIDENHHVFLNLTSLKFYMLPQNVQILHDGEVQLLNSIKFAAYPTYCP 72
Query: 184 PSLEDI--------------RHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHC 229
LED +G N D+ + + + + P+R+ FL+ N+
Sbjct: 73 KDLEDFPRQCFDLSNRTYLNGFIGFTNAATYDYAHSVLLLISHMVPVRDHFLL--NHFDN 130
Query: 230 KSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVE---FMSWL 286
+ + R +KIW + FK +S +FL S + R G+ NP++ F+ WL
Sbjct: 131 QGEFIKRLSICVKKIWSPKLFKHHLSVDDFL------SYLKVREGLNLNPIDPRLFLLWL 184
Query: 287 LNTLHSDLRNTKKNTSII-YECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITT 345
N + S K SI+ Y C +G++++ K K S +++T
Sbjct: 185 FNKICSSSNELK---SILNYSC-KGKVKIAKVESKPEAS----------------ESVTG 224
Query: 346 ETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYR 405
+ PF +L LDLP F+D + +PQ+ + +L KF + +
Sbjct: 225 KVIVKPFWVLTLDLPEFSPFEDGNSVDDLPQINITKLLTKFTKSRSSS------TSTVFE 278
Query: 406 VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLI 465
+TRLP+++I H RF +N+ + PVKN ++ + E E L KY L
Sbjct: 279 LTRLPQFLIFHFNRFDRNS----------DHPVKN---RNQTLVEFSSELEILHVKYRLK 325
Query: 466 ANIVH 470
AN+VH
Sbjct: 326 ANVVH 330
>gi|390363573|ref|XP_781718.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3
[Strongylocentrotus purpuratus]
Length = 503
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 104/433 (24%), Positives = 163/433 (37%), Gaps = 87/433 (20%)
Query: 124 CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYC-LPDGYEIN 182
C+V SN N + CL CG GR HA H E H IN VYC + D + +N
Sbjct: 31 CAVCRSNKNPWMCLACGVVLCGRYVNGHAKKHYEENQHSASINCENLAVYCYVCDDHALN 90
Query: 183 DPSLEDIRHV---------------------------------------------GLNNI 197
D E I+HV GL N+
Sbjct: 91 DNKTETIKHVRQFLQAKVNLQYEKQLKTLTGDVAGDHIDGPPRKKLAANTRANIPGLRNL 150
Query: 198 KETDFVNVTIQSLMRVTPLRNFFL-IPE-----------------NYRHCKSPLVHRFGD 239
T F+N +QSL + +F +P N +H LV
Sbjct: 151 GNTCFMNAVLQSLSNINQFCGYFKDLPAVELRSGKTAGKRIYNTRNMKHDDVSLVEEIRK 210
Query: 240 LTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK 299
+W + +SP + L VM RFR Q + EFM +LL+ LH++L+ +
Sbjct: 211 TLCALWQGD--QTAISP-DSLFTVMWKIFPRFRGYQQQDAHEFMRYLLDRLHTELQGSTW 267
Query: 300 NTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDL 359
T+ + G +V I G + G + I PFL + LD+
Sbjct: 268 PTTPKKQ-TNGHATIVSVI----FGGLLLSEVTCRPCGSLYKKID------PFLDVSLDI 316
Query: 360 P----PPPLFKDVME----KNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPK 411
P P KD + ++ + L++ + + + + ++ + +P
Sbjct: 317 PERFRPRSKNKDGSQVCRLQDCMQSFIAVEELEETEQYMCPKCQQRQPSTKKFWLKAIPN 376
Query: 412 YMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHD 471
+ +H++RFT + F K T V FP+K L+++ ++ P ++ + YDL A IVH
Sbjct: 377 VLCIHLKRFTWSGFLRTKIDTYVQFPMKGLDIQPFMLGPECQDENVSTTVYDLAAVIVHQ 436
Query: 472 GKPEG-GFYRVFV 483
G G G Y F
Sbjct: 437 GSGAGAGHYIAFA 449
>gi|443688793|gb|ELT91385.1| hypothetical protein CAPTEDRAFT_151271 [Capitella teleta]
Length = 412
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 148/342 (43%), Gaps = 42/342 (12%)
Query: 175 LPDGYEINDP-SLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENY 226
L +GY + SL + VGL N+ T F+N IQ L LR++ + +
Sbjct: 53 LSNGYNTDSSTSLSNRGIVGLRNLGNTCFMNSVIQCLSNTRLLRDYCRRDEHKDEVNKTT 112
Query: 227 RHCKSPLVHRFGDLTRKIWHARNFKG----QVSPHEFLQAVMKASKKRFRIGVQSNPVEF 282
+ K L++ F +L IW KG VSP++F + + +K RF Q + EF
Sbjct: 113 SNMKGALINAFANLMHSIW-----KGAPDTHVSPNDFKSQIARFAK-RFVGYNQQDAQEF 166
Query: 283 MSWLLNTLHSDLRNTK-KNTSIIYECFQGELEVVKEIPKNTISGND---------QNTEK 332
+ +LL LH D+ K K + IY+ + +E+ K + ND Q
Sbjct: 167 LMYLLEGLHEDVNRVKEKRKNRIYDEDDSKTVSAQEMWKMYLHQNDSKIVDIFVGQLKSS 226
Query: 333 GSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE--- 389
+ G H + T + PF L L + + + + ++ LF + DG+
Sbjct: 227 LTCTGCGHVSDTFD----PFWDLSLPIKKGHGYGN--DVSLESCFELFTSEEVLDGDEKP 280
Query: 390 TVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPL 449
++ + + + R PK +I+H++RF +++ + K T+VNFP+++LEL +
Sbjct: 281 MCSKCKKRQKCTKSFSIQRFPKVLIIHLKRFNQDSSYRSKLSTMVNFPLQSLELNQFAA- 339
Query: 450 PTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
E + Y+L A H G P GG Y + + W
Sbjct: 340 ----EKNGAPAMYNLFAVSNHSGTPFGGHYTAYTKHPETSTW 377
>gi|384498157|gb|EIE88648.1| hypothetical protein RO3G_13359 [Rhizopus delemar RA 99-880]
Length = 523
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 150/366 (40%), Gaps = 55/366 (15%)
Query: 169 TEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRH 228
T ++ +P +L + GL N+ T ++N IQ L P +F+ +H
Sbjct: 147 TSNIHQIPSSVFSQQGALIVVGTTGLKNLGNTCYMNSIIQCLSGTLPFARYFISGVFRQH 206
Query: 229 CKSP--------LVHRFGDLTRKIWHAR-NFKGQVSPHEFLQAVMKASKKRFRIGVQSNP 279
L +F DL R IW+ NF VSP F +A+++ + RF Q +
Sbjct: 207 VNRTNKLGTGGILTEKFADLLRAIWNENYNF---VSPMSFREAIIRFAP-RFSGTDQHDS 262
Query: 280 VEFMSWLLNTLHSDLRNTKKNTS--IIYECFQGELEVVKEIPKNTISGN------DQNTE 331
EF+++LL+ +H D+ N S + Q ELE K +P S +NT
Sbjct: 263 QEFLTFLLDGIHEDVNLASHNHSGHLPTMTKQEELEFEK-LPDWQASAMAWERYLSRNTS 321
Query: 332 KGSD--GGDDHDNIT------TETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNIL 383
G +T T T+ PF+ L L +P K I V L+ L
Sbjct: 322 IVVSLFQGQYRSRLTCSSCKHTSTTYTPFMSLSLPIPAKSRLK-------ISNVTLYQCL 374
Query: 384 KKFDGETVTE----VVRPHVARMR-----YRVTRLPKYMILHMRRFTKNNFFVEKNPTLV 434
F E V E + P + R ++RLP +++H++RF+ + F K +V
Sbjct: 375 DYFVKEEVLEKDDAWMCPKCGKKRKATKQLMISRLPDVLLIHLKRFSADGLFKNKLDVMV 434
Query: 435 NFPVKNLELKDYIP---------LPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQR 485
+P+K L+L +Y+ T ++ S YDL A H G GG Y +V+
Sbjct: 435 KYPIKGLDLYNYVSRFIPPRPPSSSTSLAQDRTLSTYDLYAVSNHYGSLSGGHYTAYVKD 494
Query: 486 KSEELW 491
+W
Sbjct: 495 GHRNIW 500
>gi|221101271|ref|XP_002154126.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like, partial
[Hydra magnipapillata]
Length = 76
Score = 87.0 bits (214), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/46 (80%), Positives = 41/46 (89%)
Query: 99 VEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQ 144
V+ R CPYLDT+NR VLDFDFEK CSVSLS+LNVYACLVCGKY+Q
Sbjct: 31 VDKSRHCPYLDTINRSVLDFDFEKLCSVSLSHLNVYACLVCGKYFQ 76
>gi|410908263|ref|XP_003967610.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Takifugu
rubripes]
Length = 612
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 114/465 (24%), Positives = 168/465 (36%), Gaps = 122/465 (26%)
Query: 124 CSVSLSNLNVYACLVC-----GKYYQGRGQKSHAYTHSL------------EAGHH-VYI 165
CSV SN + + CL C G+Y G +K T ++ E HH V +
Sbjct: 29 CSVCRSNKSPWICLTCLMVHCGRYVNGHAKKHFEETQAVGVSQRKSDKQDKEKYHHSVCM 88
Query: 166 NLRTEKVYCL-PDGYEINDPSLEDIRHV-------------------------------- 192
+ + V+C D + +ND L ++ V
Sbjct: 89 DCSSYSVFCYRCDDFVVNDTKLGQVQKVREHLQSLENFALMGDRQRKRKFQESLSADSKL 148
Query: 193 ------------GLNNIKETDFVNVTIQSLMRVTPLRNFF--LIPENYRHCKSP------ 232
GL N+ T F+N +QSL + +F L + R K+
Sbjct: 149 MKDNDGIAVGATGLRNLGNTCFMNAILQSLSNIEQFSCYFKELPAVSLRSGKTAGRRMYH 208
Query: 233 ----------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEF 282
LV F +W + SP + K FR Q + EF
Sbjct: 209 TRSQGDSSVSLVEEFRKTLCSLWQGS--QTAFSPDSLFYTIWKI-MPSFRGYQQQDAHEF 265
Query: 283 MSWLLNTLHSDLRNTKKNTSIIYE--------------CFQGELEVVKEIPKNTISGNDQ 328
M +LL+ LH +L+ + S C G VV I G Q
Sbjct: 266 MRYLLDHLHRELQYGRNGASHAASPQDGVRLSAADGKCCINGTASVVTSI----FGGILQ 321
Query: 329 NTEKGSDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF- 386
N G TE+ + PFL L LD+P K ++ P L + L+ F
Sbjct: 322 NEVNCLICG-------TESRKFDPFLDLSLDIPSQFRQKRSKDQEPGPTCTLSDCLRSFT 374
Query: 387 DGETV--TEVVRPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPV 438
D E + TE+ H + R + V +LPK + LH++RF F K T V FP+
Sbjct: 375 DLEELDETELYFCHKCKKRQKSTKKFWVQKLPKVLCLHLKRFHWTAFLRNKIDTYVEFPL 434
Query: 439 KNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVF 482
K L+++ Y L P+ + YDL+A +VH G G G Y +
Sbjct: 435 KGLDMRGY--LLEPENSLPESCVYDLVAVVVHHGSGVGSGHYTAY 477
>gi|348532572|ref|XP_003453780.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like
[Oreochromis niloticus]
Length = 403
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 139/332 (41%), Gaps = 60/332 (18%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPENYRHCKS--PLVHRFGDLTRKIW 245
VGL N+ T F+N +Q L LR++ L I + +C+S L+ F LT+ +W
Sbjct: 59 VGLRNLGNTCFMNSILQCLSNTLELRDYCLRNCHITDLNNNCRSNTALIEEFAKLTQSLW 118
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIY 305
+ N +SP EF V + + K F Q + EF+ +LL+ LH
Sbjct: 119 TSAN-NEPISPSEFRNQVQRCAPK-FVGCNQQDAQEFLRFLLDGLH-------------- 162
Query: 306 ECFQGELEVVKEIPKNTISGNDQ--NTEKGSDGGDDHDNITTETSRMPFLMLG------- 356
E+ V PK ++ D + EKG + + + E S++ L +G
Sbjct: 163 ----NEVNRVTVRPKVSVLDFDHLADDEKGRRMWNMY--LAREDSKVVDLFVGQLKSSLT 216
Query: 357 --------------LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---TVTEVVRPHV 399
DL P K E + + LF DGE T T+
Sbjct: 217 CTACGFRSTVFDPFWDLSIPIAQKISGEVTLKDCLRLFTKEDVLDGEERPTCTKCKARRK 276
Query: 400 ARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLR 459
R+ + + P+ ++LH++RF+ +N K T VNFP+K+L+L+++ P+ R
Sbjct: 277 CTKRFSIQKFPQILVLHLKRFSDSNVRASKLSTYVNFPLKDLDLREFASEPSE------R 330
Query: 460 SKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+L A H G GG Y + + + W
Sbjct: 331 PVYNLYAVSNHSGNALGGHYTAYCKNPALGEW 362
>gi|327533544|pdb|2Y6E|A Chain A, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533545|pdb|2Y6E|B Chain B, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533546|pdb|2Y6E|C Chain C, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533547|pdb|2Y6E|D Chain D, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533548|pdb|2Y6E|E Chain E, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533549|pdb|2Y6E|F Chain F, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
Length = 367
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 146/333 (43%), Gaps = 45/333 (13%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL ++FL E N K + + +L ++
Sbjct: 9 CGLGNLGNTXFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 68
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 69 MWSGRD--AHVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 125
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 126 ELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 185
Query: 357 LDLPPPPLFKD-VMEKNII-PQ------VPLFNILKKFDG-ETVTE--------VVRPHV 399
L P PL KD VME ++ PQ V L + ++ F ET+ E +
Sbjct: 186 L---PLPLKKDRVMEGPMLQPQKKKKTTVALRDCIELFTTMETLGEHDPWYCPNCKKHQQ 242
Query: 400 ARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLR 459
A ++ + LPK +++H++RF+ N ++ +K T+V FP++ L + +++ N R
Sbjct: 243 ATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVC------NLSAR 296
Query: 460 SK-YDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
YDLIA H G G Y + + K W
Sbjct: 297 PYVYDLIAVSNHYGAMGVGHYTAYAKNKLNGKW 329
>gi|449662479|ref|XP_002167244.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Hydra
magnipapillata]
Length = 503
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 113/451 (25%), Positives = 169/451 (37%), Gaps = 116/451 (25%)
Query: 124 CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLE-AGHHVYINLRTEKVYCLP-DGYEI 181
CSV +N + + CL CG+ GR HA HS A H+V I+ + V+C D + I
Sbjct: 30 CSVCKTNKSPWMCLKCGEVLCGRYVNGHAKMHSESCASHNVCID-ASLMVFCYKCDDFII 88
Query: 182 NDPSLEDI--------------------------------------------------RH 191
ND S DI R
Sbjct: 89 NDTSTGDINLIRTALQNEIPRIQKRKRRQSIDQQLSKESPMKKLNRSPSKENKAGNNVRT 148
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFF-------------------LIPENYRHCKSP 232
VGL N+ T F+N +QSL + +F +Y+
Sbjct: 149 VGLRNLGNTCFMNAILQSLSNLKYFSGYFKELPAIELNVKNMDEQTKKYYTRSYQSDDIS 208
Query: 233 LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHS 292
LV + +W + +SP V K RFR Q + EFM LL+ +H+
Sbjct: 209 LVEELRKVLCALWQ-QGSNTAISPESLFTVVWKVVP-RFRGYQQHDAHEFMHCLLDRVHN 266
Query: 293 DLRNTKKNT----SIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTET 347
+L +K+ T +II F G+L+ V + TIS K + D
Sbjct: 267 ELLTSKRFTNGCDTIISGIFGGQLQSDVTCLTCGTIS-------KKQEAYRD-------- 311
Query: 348 SRMPFLMLGLDLPPPPLFKDVMEKNIIPQ-VPLFNILKKF-DGETVTE--------VVRP 397
L LD+P P K K P L + L+ F + ET+ E +
Sbjct: 312 -------LSLDIPFKPKLKTSPGKKKTPSACQLIDCLQSFVEMETLDESEWYMCEKCNKK 364
Query: 398 HVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEK 457
+ ++ + RLP + LH++RF + K T V FP+K L + +I L T ++ +
Sbjct: 365 QPSTKKFWILRLPNVLCLHLKRFRYSPLARTKVDTFVRFPIKELNMDPFI-LKTNQKTNR 423
Query: 458 LRSK---YDLIANIVHDGKPEG-GFYRVFVQ 484
+ K YDL A +VH G G G Y + +
Sbjct: 424 MSIKAHLYDLAACVVHHGSGAGSGHYTTYAR 454
>gi|402223712|gb|EJU03776.1| cysteine proteinase [Dacryopinax sp. DJM-731 SS1]
Length = 434
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 147/345 (42%), Gaps = 45/345 (13%)
Query: 187 EDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKS--PLVHR------FG 238
+ I GL N+ T ++N +Q L P FFL R + PL R F
Sbjct: 66 QAISTSGLKNLGNTCYMNAPLQCLSATVPFARFFLENRWQRAVNTVNPLGTRGQLAGAFA 125
Query: 239 DLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK 298
+ +++W A NF + P F ++V + F G Q + EF+S+LL+ LH DL
Sbjct: 126 KMVQEMWQA-NFT-YLDPTNFRRSVCHYAPS-FAGGDQHDAQEFISFLLDGLHEDLNRIL 182
Query: 299 KNTSIIYECFQGELEVVKEIPKNTISGND--QNTEKGSDG-------GDDHDNI------ 343
+ + + E E+ + +P+ I+G Q ++ D G + +
Sbjct: 183 QKPANDDPTPEHEAEL-ERLPQQ-IAGEQEWQRYQRRDDSLVVDYFQGQFRNKLECMTCH 240
Query: 344 TTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMR 403
T T+ F+ L L +P V + + I++K D + A +
Sbjct: 241 KTSTTYNAFMYLSLPIPTGRGMSKVTLQQCMDAFVKEEIMEKGDAWKCPHCMALRKATKQ 300
Query: 404 YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRS--- 460
++RLP +++H++RF+ FV+K TLV+FP+K+L+L +Y+P P P +K S
Sbjct: 301 LSISRLPPVLLIHLKRFSYKGPFVDKLETLVDFPLKDLDLTNYMPSPLPPGVDKGFSQSS 360
Query: 461 --------------KYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+Y+L A H G G Y F+ K ++
Sbjct: 361 PIKLDDPRSQIPPYRYELYAVTNHFGSLTSGHYTAFIASKGSWVY 405
>gi|392565337|gb|EIW58514.1| cysteine proteinase [Trametes versicolor FP-101664 SS1]
Length = 1173
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 150/365 (41%), Gaps = 66/365 (18%)
Query: 175 LPDGYEIND-PSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFF--------LIPEN 225
+P Y + P L+ I GL N+ T ++N TIQ L P FF + N
Sbjct: 798 IPSDYPVTYWPDLQ-IGTTGLKNLGNTCYMNSTIQCLSATVPFSRFFTDGRWKSAVNMMN 856
Query: 226 YRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSW 285
K L + F ++ R++W + G +SP F +++ + + F Q + EF+S+
Sbjct: 857 PMGTKGNLANAFANILREMWQGEH--GTLSPVPFRRSLCSHAPQ-FSGSEQHDSQEFLSF 913
Query: 286 LLNTLHSDL-RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGG------- 337
LL+ LH DL R K + + ELE +P S + + D
Sbjct: 914 LLDGLHEDLNRILAKPQVVSTPEREAELE---RLPTQIASEQEWQIYRMRDDSLVVDFFQ 970
Query: 338 ----DDHDNIT---TETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGET 390
+ + +T T T+ F+ L L +PP K+ +VPL + F E
Sbjct: 971 GQYRNRMECLTCHKTSTTYNTFMYLTLPVPP---------KSGNAKVPLQQCIDAFVKEE 1021
Query: 391 VTEVVR----PHV-----ARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNL 441
V + PH A R ++RLP +++H++RF+ F +K T V FP+K L
Sbjct: 1022 VMDKSDAWHCPHCKTLRKATKRLSLSRLPPVLLIHLKRFSAKGPFTDKIETTVEFPLKGL 1081
Query: 442 ELKDYIPLPTPK---------------ENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRK 486
+L +Y+P P P +N R YDL H G G Y F+ +
Sbjct: 1082 DLTNYMPPPLPPGVSGGSPVQPDDPRYQNPPYR--YDLYGVTNHFGSLSTGHYTAFIASR 1139
Query: 487 SEELW 491
L+
Sbjct: 1140 GGWLY 1144
>gi|426379399|ref|XP_004056385.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Gorilla gorilla
gorilla]
Length = 724
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 122/462 (26%), Positives = 181/462 (39%), Gaps = 101/462 (21%)
Query: 101 VRRDCPYLDTVNRQVLDFDFEKF---------CSVSLSNLNVYACLVCGKYYQGRGQKSH 151
V +CP+L + + D KF CSV SN + + CL C + GR H
Sbjct: 241 VAMECPHLSS--SVCIAPDSAKFPNGSPSSWCCSVCRSNKSPWVCLTCSSVHCGRYVNGH 298
Query: 152 AYTH----------------SLEAGHHVYINLRTEKVYCL-PDGYEINDPSLEDIRHV-- 192
A H +A H V ++ + YC D + +ND L ++ V
Sbjct: 299 AKKHYEDAQVPLTNHKKSEKQDKAQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVRE 358
Query: 193 GLNNIKETDFV-----------NVTIQS-LMRV---------TPLRNF----FL--IPEN 225
L N++ + F N T+ S L++V T LRN F+ I ++
Sbjct: 359 HLQNLENSAFTADRHRKRKLLENSTLNSKLLKVNGSTTAICATGLRNLGNTCFMNAILQS 418
Query: 226 YRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSW 285
R LV F +W + SP V K FR Q + EFM +
Sbjct: 419 LRS----LVEEFRKTLCALWQGS--QTAFSPESLFYVVWKI-MPNFRGYQQQDAHEFMRY 471
Query: 286 LLNTLHSDLR---NTKKNTSIIYE----------CFQGELEVVKEIPKNTISGNDQNTEK 332
LL+ LH +L+ N ++I+ E C G VV I G QN
Sbjct: 472 LLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAI----FGGILQNEVN 527
Query: 333 GSDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF-DGET 390
G TE+ + PFL L LD+P K + P L + L+ F D E
Sbjct: 528 CLICG-------TESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEE 580
Query: 391 V--TEVVRPH------VARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLE 442
+ TE+ H + ++ + +LPK + LH++RF + K T V FP++ L+
Sbjct: 581 LDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLD 640
Query: 443 LKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
+K Y L P+ + YDL A +VH G G G Y +
Sbjct: 641 MKCY--LLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYA 680
>gi|348505611|ref|XP_003440354.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Oreochromis
niloticus]
Length = 623
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 149/383 (38%), Gaps = 61/383 (15%)
Query: 145 GRGQKSHAYTHSLEAGHHVYINLRTEKVYCLP--DGYEINDPSLEDIRHVGLNNIKETDF 202
G+ QK + SLE + R K+ P DG + D + GL N+ T F
Sbjct: 111 GQVQKLREHLQSLENSALMGERQRKRKLQDSPAGDGKLLKDSDGVALGATGLRNLGNTCF 170
Query: 203 VNVTIQSLMRVTPLRNFF------------LIPENYRHCKS------PLVHRFGDLTRKI 244
+N +QSL + +F H +S LV F +
Sbjct: 171 MNAILQSLSNIEQFSCYFKELPAVALRSGKTAGRRMYHTRSQGDNSVSLVEEFRKTLCSL 230
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSII 304
W + SP A+ K FR Q + EFM +LL+ LH +L+ ++ S
Sbjct: 231 WQGN--QTAFSPDSLFYAIWKI-MPSFRGYQQQDAHEFMRYLLDHLHRELQYSRNGASHP 287
Query: 305 YE--------------CFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM 350
C G VV I G QN G TE+ +
Sbjct: 288 LSPQDGVRLSSTDGKCCTNGTASVVTSI----FGGILQNEVNCLICG-------TESRKF 336
Query: 351 -PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF-DGETV--TEVVRPHVARMRYRV 406
PFL L LD+P K ++ +P L + L F D E + TE+ H + R +
Sbjct: 337 DPFLDLSLDIPSQFRQKRNKDQEPVPTCTLRDCLHSFTDLEELDDTELYYCHKCKKRQKS 396
Query: 407 TR------LPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRS 460
T+ LPK + LH++RF F K T V FP+K L+++ Y L P+++
Sbjct: 397 TKKFWIQKLPKVLCLHLKRFHWTAFLRNKVDTYVEFPLKGLDMRGY--LLEPEKSLPGSC 454
Query: 461 KYDLIANIVHDGKPEG-GFYRVF 482
YDL+A +VH G G G Y +
Sbjct: 455 LYDLVAVVVHHGSGVGSGHYTAY 477
>gi|170573077|ref|XP_001892342.1| ubiquitin thiolesterase homolog [Brugia malayi]
gi|158602339|gb|EDP38837.1| ubiquitin thiolesterase homolog, putative [Brugia malayi]
Length = 282
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 38/42 (90%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQ 144
R CPYLDT++R LDFDFEK CSVSLS++NVYAC+VCGKY+Q
Sbjct: 222 RQCPYLDTIDRCALDFDFEKLCSVSLSHINVYACMVCGKYFQ 263
>gi|70934810|ref|XP_738578.1| Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger protein
[Plasmodium chabaudi chabaudi]
gi|56514911|emb|CAH78953.1| Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger protein,
putative [Plasmodium chabaudi chabaudi]
Length = 124
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 59/86 (68%), Gaps = 2/86 (2%)
Query: 406 VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLI 465
+++LPKY+I ++RF+KNNFF EKN T+VNF +KNL++KDY+ +N +KY+L+
Sbjct: 3 ISKLPKYLIFTIQRFSKNNFFTEKNGTIVNFVIKNLDMKDYVHQDYLDQNP--VTKYNLV 60
Query: 466 ANIVHDGKPEGGFYRVFVQRKSEELW 491
ANI H G G Y++ V +++ W
Sbjct: 61 ANIFHSGTVTNGSYKIHVLQQATNEW 86
>gi|417402232|gb|JAA47969.1| Putative ubiquitin carboxyl-terminal hydrolase 3 [Desmodus
rotundus]
Length = 520
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 120/474 (25%), Positives = 171/474 (36%), Gaps = 126/474 (26%)
Query: 124 CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAG----------------HHVYINL 167
CSV SN + + CL C + GR HA H +A H V ++
Sbjct: 29 CSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQVPLTNHKKSEKQDKVQHTVCMDC 88
Query: 168 RTEKVYCL-PDGYEINDPSLEDIRHV---------------------------------- 192
+ YC D + +ND L ++ V
Sbjct: 89 SSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHRKRKLLENSSLNSKLLK 148
Query: 193 -----------GLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYRHC 229
GL N+ T F+N +QSL + LRN H
Sbjct: 149 VNGSTTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHT 208
Query: 230 KS------PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFM 283
+S LV F +W + SP V K FR Q + EFM
Sbjct: 209 RSQGDNNVSLVEEFRKTLCALWQGS--QTAFSPESLFYVVWKI-MPNFRGYQQQDAHEFM 265
Query: 284 SWLLNTLHSDLR---NTKKNTSIIYE----------CFQGELEVVKEIPKNTISGNDQNT 330
+LL+ LH +L+ N ++I+ E C G VV I G QN
Sbjct: 266 RYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAI----FGGILQNE 321
Query: 331 EKGSDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNI--IPQVPLFNILKKF- 386
G TE+ + PFL L LD+P F++ KN P L + L+ F
Sbjct: 322 VNCLICG-------TESRKFDPFLDLSLDIPSQ--FRNKRSKNQENGPVCSLRDCLRSFT 372
Query: 387 DGETV--TEVVRPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPV 438
D E + TE+ H R + + + +LPK + LH++RF + K T V FP+
Sbjct: 373 DLEELDETELYMCHKCRKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPL 432
Query: 439 KNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFVQRKSEELW 491
+ L++K Y L P+ + YDL A +VH G G G Y + K E W
Sbjct: 433 RGLDMKCY--LLEPENSGPENCLYDLAAVVVHHGSGVGSGHYTAYA--KHEGRW 482
>gi|213983223|ref|NP_001135522.1| ubiquitin specific peptidase 2 [Xenopus (Silurana) tropicalis]
gi|195540057|gb|AAI67952.1| Unknown (protein for MGC:147993) [Xenopus (Silurana) tropicalis]
Length = 383
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 135/330 (40%), Gaps = 57/330 (17%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRH------CKSPLVHRFGDLTRKIW 245
VGL N+ T F+N +Q L LR++ L +YR C + ++ F L + IW
Sbjct: 46 VGLRNLGNTCFMNSILQCLSNTKDLRDYCL-QNSYRRDLSSKKCNTAIMEEFARLLQAIW 104
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIY 305
+ + VSP EF + K + RF Q + EF+ +LL+ LH+++
Sbjct: 105 TS-SANEVVSPSEFKTQIQKYAP-RFMGYNQQDAQEFLRFLLDGLHNEVNRV-------- 154
Query: 306 ECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLG--------- 356
VK P + + ++EKG + + E SR+ L +G
Sbjct: 155 --------TVKPRPSSQDLDHMPDSEKGKHMWKRY--LEREDSRIVELFVGQLKSSLTCT 204
Query: 357 ------------LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---TVTEVVRPHVAR 401
DL P K E +++ + LF DG+ T
Sbjct: 205 ECGYCSTVFDPFWDLSLPIAKKSASEVSLVDCMRLFTKEDVLDGDEKPTCCRCKARRRCT 264
Query: 402 MRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSK 461
++ + + PK ++LH++RF++ K T VNFP+K+L+L+++ P +
Sbjct: 265 KKFTIQKFPKILVLHLKRFSEGRIRSGKLSTFVNFPLKDLDLREFSSESNP------HAT 318
Query: 462 YDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+L A H G GG Y + + S W
Sbjct: 319 YNLYAVSNHSGTTMGGHYTAYCKNPSNGEW 348
>gi|74179937|dbj|BAE36525.1| unnamed protein product [Mus musculus]
Length = 482
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 175/432 (40%), Gaps = 94/432 (21%)
Query: 124 CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTH----------------SLEAGHHVYINL 167
CSV SN + + CL C + GR HA H +A H V ++
Sbjct: 29 CSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQIPLLNHKRSEKQEKAQHTVCMDC 88
Query: 168 RTEKVYCL-PDGYEINDPSLEDIRHV--GLNNIKETDFV-----------NVTIQS-LMR 212
+ YC D + +ND L ++ V L N++ + F N ++ S L++
Sbjct: 89 SSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHRKRKLLENSSLNSKLLK 148
Query: 213 V---------TPLRNF----FL--IPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPH 257
V T LRN F+ I ++ R LV F +W + SP
Sbjct: 149 VNGSTTAICATGLRNLGNTCFMNAILQSLR----SLVEEFRKTLCALWQGS--QTAFSPE 202
Query: 258 EFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR---NTKKNTSIIYECFQGELEV 314
V K FR Q + EFM +LL+ LH +L+ N ++I+ E
Sbjct: 203 SLFYVVWKI-MPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQE-------- 253
Query: 315 VKEIPKNTISGNDQNTEKGSD-------GGDDHDNIT-----TETSRM-PFLMLGLDLPP 361
K+T+S +++ G+ GG + + TE+ + PFL L LD+P
Sbjct: 254 -----KSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPS 308
Query: 362 PPLFKDVMEKNIIPQVPLFNILKKF-DGETV--TEVVRPHVARMR------YRVTRLPKY 412
K + P L + L+ F D E + TE+ H + + + + +LPK
Sbjct: 309 QFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKA 368
Query: 413 MILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG 472
+ LH++RF + K T V FP++ L++K Y L P+ + YDL A +VH G
Sbjct: 369 LCLHLKRFHWTAYLRNKVDTYVQFPLRGLDMKCY--LLEPENSGPDSCLYDLAAVVVHHG 426
Query: 473 KPEG-GFYRVFV 483
G G Y +
Sbjct: 427 SGVGSGHYTAYA 438
>gi|384494007|gb|EIE84498.1| hypothetical protein RO3G_09208 [Rhizopus delemar RA 99-880]
Length = 837
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 143/338 (42%), Gaps = 48/338 (14%)
Query: 189 IRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLI--------PENYRHCKSPLVHRFGDL 240
I GL N+ T ++N IQ L P +F+ EN+ L + F L
Sbjct: 481 IGGTGLKNLGNTCYMNSIIQCLSGTIPFARYFISGLYKQHINKENFLGTGGVLANEFATL 540
Query: 241 TRKIWHAR-NFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK 299
R +W A NF +SP +F +A+ + S + F+ Q + EF+++LL+ LH D KK
Sbjct: 541 LRSMWGANCNF---ISPVQFREAITQFSPQ-FKGSEQHDSQEFLNFLLDGLHEDCNLIKK 596
Query: 300 NTSIIYECFQGELEVVKEIP--KNTISGNDQNTEKGSD------GGDDHDNIT------T 345
S E + E + +P K + ++ E+ S G +T T
Sbjct: 597 RPSQPPESPEEEARF-ERLPDWKASAVAWEKYLERNSSVVVSLFQGQYRSRLTCLTCHTT 655
Query: 346 ETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF-DGETVTEVVRPHVARMR- 403
T+ F+ L L +P + V L+ L F ET+ + H R +
Sbjct: 656 STTYNSFMSLSLPIP--------ATRTSPATVNLYQCLDYFVKEETLDDDDAWHCPRCKK 707
Query: 404 -------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIP---LPTPK 453
+++LP +++H++RF+ + F K T+V+ P++ L+L Y+P P +
Sbjct: 708 LCRASKSLTISKLPDVLLIHLKRFSFDGPFNNKLETMVDSPIRGLDLSKYVPSSMFPPDQ 767
Query: 454 ENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+EK YDL A H G GG Y V+ W
Sbjct: 768 PSEKSTFSYDLYAVSNHYGSLTGGHYTACVRNGYRNEW 805
>gi|320169093|gb|EFW45992.1| hypothetical protein CAOG_08358 [Capsaspora owczarzaki ATCC 30864]
Length = 142
Score = 81.6 bits (200), Expect = 9e-13, Method: Composition-based stats.
Identities = 32/42 (76%), Positives = 38/42 (90%)
Query: 105 CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGR 146
CPYLDTV+R LDFDFEK CSVSLS+ N+YACL+CGKY+QG+
Sbjct: 97 CPYLDTVDRSQLDFDFEKVCSVSLSDFNIYACLICGKYFQGK 138
>gi|432866297|ref|XP_004070782.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like [Oryzias
latipes]
Length = 404
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 129/313 (41%), Gaps = 25/313 (7%)
Query: 183 DPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCK-----SPLVHRF 237
DP VGL NI T F+N +Q L LRN+ L+ ++Y+H K + L+ F
Sbjct: 54 DPLALGSGRVGLRNIGNTCFLNAVVQCLSHTRALRNYSLL-KSYKHEKFSKEDAKLMEAF 112
Query: 238 GDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--- 294
+ +W + V P +F ++ K + F Q + EF+ +LL+ LH+++
Sbjct: 113 SKVLSGLWDVNDGDTVVHPRKFY-SIFKDAVPYFSGYSQQDAQEFLRFLLDKLHTEINRR 171
Query: 295 ---RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTE--KGSDGGDDHDNITTETSR 349
R T K Y F+ E K+ + E G H ++ + S
Sbjct: 172 PNVRKTGKEPEQKYARFRIAEEAAAMWKKHLERDDSIIVELFSGQLRSSLHCSVCSHYSN 231
Query: 350 MPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGET--VTEVVRPHV-ARMRYRV 406
+ L LP P E + + LF+ +K D E + E H R +
Sbjct: 232 TFDVFCDLSLPIPKR-SSGREVTLWECLDLFSQEEKLDKENSPMCERCNRHTECTKRLSI 290
Query: 407 TRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIA 466
R P+ +++H+ RFT + + + K+ V+FP+ NL+L Y P YDL A
Sbjct: 291 QRFPQVLVIHLNRFTTSRWSISKSTVHVSFPITNLDLGPYGPADCGP------VLYDLYA 344
Query: 467 NIVHDGKPEGGFY 479
H G G Y
Sbjct: 345 ICNHAGTVNMGHY 357
>gi|426233170|ref|XP_004010590.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1 [Ovis
aries]
Length = 520
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 117/466 (25%), Positives = 168/466 (36%), Gaps = 124/466 (26%)
Query: 124 CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTH----------------SLEAGHHVYINL 167
CSV SN + + CL C + GR HA H +A H V ++
Sbjct: 29 CSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQIPLTNHKKSERQEKAQHTVCMDC 88
Query: 168 RTEKVYCL-PDGYEINDPSLEDIRHV---------------------------------- 192
+ YC D + +ND L ++ V
Sbjct: 89 SSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHRKRKLLENSSLNSKLLK 148
Query: 193 -----------GLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYRHC 229
GL N+ T F+N +QSL + LRN H
Sbjct: 149 VNGSTTAVCATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHT 208
Query: 230 KS------PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFM 283
+S LV F +W + SP V K FR Q + EFM
Sbjct: 209 RSQGDSNVSLVEEFRKTLCALWQGS--QTAFSPESLFYVVWKI-MPNFRGYQQQDAHEFM 265
Query: 284 SWLLNTLHSDLR---NTKKNTSIIYE----------CFQGELEVVKEIPKNTISGNDQNT 330
+LL+ LH +L+ N +SI+ E C G VV I G QN
Sbjct: 266 RYLLDHLHLELQGGFNGISRSSILQENSTLSASNKCCINGASTVVTAI----FGGILQNE 321
Query: 331 EKGSDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNI--IPQVPLFNILKKF- 386
G TE+ + PFL L LD+P F++ KN P L + L+ F
Sbjct: 322 VNCLICG-------TESRKFDPFLDLSLDIPSQ--FRNKRSKNQENGPTCSLRDCLRSFT 372
Query: 387 DGETV--TEVVRPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPV 438
D E + TE+ H + + + + +LPK + LH++RF + K T V FP+
Sbjct: 373 DLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPL 432
Query: 439 KNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
+ L++K Y L P+ + YDL A +VH G G G Y +
Sbjct: 433 RGLDMKCY--LLEPENSGPENCLYDLAAVVVHHGSGVGSGHYTAYA 476
>gi|118359579|ref|XP_001013029.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila]
gi|89294796|gb|EAR92784.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila SB210]
Length = 528
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 146/346 (42%), Gaps = 81/346 (23%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI--PENYRHCKSPL------VHRFGDLTRK 243
VGL N+ T F+N +Q L + PL ++ L +N + ++P+ + F +L R+
Sbjct: 167 VGLINLGNTCFMNSALQCLSNLQPLTDYCLQNKEDNEINIQNPMGSGGVVIKAFANLVRQ 226
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT------ 297
IW+ + + VSP EFL+ V+ K + G Q + EF+ +LL+ +H DL
Sbjct: 227 IWNQK--EDSVSPDEFLR-VISYFNKIYSSGRQQDSQEFLLYLLDQIHEDLNRVEKKPYV 283
Query: 298 --------------------------KKNTSIIYECFQGELEVVKEIPKNTISGNDQNTE 331
K+N S+I + FQG+L KNT+
Sbjct: 284 EQKEYFKNLNQKELEKLAADSWGDYLKRNKSVIVDLFQGQL-------KNTLKC------ 330
Query: 332 KGSDGGDDHDNITTETSRM---PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDG 388
+ +T++ PF+ L + +P K E NI + F + DG
Sbjct: 331 -----------LKCKTAKYQFEPFMYLTVPIPQ----KAENEINIQDCIEQFTEKEILDG 375
Query: 389 ET---VTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKD 445
+ E + + + +LP +++ M+RF +K T V FPV++ ++ +
Sbjct: 376 DEKWFCPECKDFQKSEKKIDLWKLPPILMICMKRFQYTAQSKKKITTKVQFPVQHFDMSE 435
Query: 446 YIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+IP KE + YDL + I H G G Y + + + ++ W
Sbjct: 436 FIPKTLQKE----KPIYDLFSVISHKGYLNFGHYVAYCKNQEDKQW 477
>gi|410899749|ref|XP_003963359.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like [Takifugu
rubripes]
Length = 411
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 128/306 (41%), Gaps = 29/306 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCK-----SPLVHRFGDLTRKIWH 246
+GL NI T F+N +Q L LR++ L+ + YR K + L F + +W
Sbjct: 63 IGLRNIGNTCFLNAIVQCLSHTCGLRDYVLL-KRYRQEKCAKEDAKLTEAFSQVLTGLWE 121
Query: 247 ARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL------RNTKKN 300
V+P +F V K + F Q + EF+ +LL+ LH ++ R T K
Sbjct: 122 ETEAVSVVNPRQFYN-VFKEAVPYFSGYSQQDAQEFLRFLLDKLHVEINRRPYVRRTVKE 180
Query: 301 TSIIYECFQGELEVVKEIPKNTISGNDQNTE--KGSDGGDDHDNITTETSRM--PFLMLG 356
T+ Y F+ E K+ + + + G H ++ + S F L
Sbjct: 181 TTQKYARFRISEEAAVMWKKHLERDDSRIVDLFSGQLRSSLHCSVCSHYSNTFDVFCDLS 240
Query: 357 LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---TVTEVVRPHVARMRYRVTRLPKYM 413
L +P ++VM K+ + LF+ +K D E R R + R P+ +
Sbjct: 241 LPIPKRSSGREVMLKDCLD---LFSQEEKLDRENSPMCERCTRHTECTKRLSIQRFPQVI 297
Query: 414 ILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGK 473
++H+ RFT + + + K+ V+FP+ NL+L Y P+ YDL A H G
Sbjct: 298 VIHLNRFTMSRWSISKSTVYVSFPLTNLDLGPYGPVDCGP------VLYDLYAICNHVGT 351
Query: 474 PEGGFY 479
G Y
Sbjct: 352 VNMGHY 357
>gi|348583870|ref|XP_003477695.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Cavia
porcellus]
Length = 520
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 114/464 (24%), Positives = 165/464 (35%), Gaps = 120/464 (25%)
Query: 124 CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAG----------------HHVYINL 167
CSV SN + + CL C + GR HA H +A H V ++
Sbjct: 29 CSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQIPLTNFKKSEKQDKPQHTVCMDC 88
Query: 168 RTEKVYCL-PDGYEINDPSLEDIRHV---------------------------------- 192
+ YC D + +ND L ++ V
Sbjct: 89 SSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHRKRKFSENSSLNSKLLK 148
Query: 193 -----------GLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYRHC 229
GL N+ T F+N +QSL + LRN H
Sbjct: 149 VNGSTTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHT 208
Query: 230 KS------PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFM 283
+S LV F +W + SP V K FR Q + EFM
Sbjct: 209 RSQGDSSVSLVEEFRKTLCALWQGS--QTAFSPESLFYVVWKI-MPNFRGYQQQDAHEFM 265
Query: 284 SWLLNTLHSDLR---NTKKNTSIIYE----------CFQGELEVVKEIPKNTISGNDQNT 330
+LL+ LH +L+ N T+I+ E C G VV + G QN
Sbjct: 266 RYLLDHLHLELQGGFNGVSGTAILQENSSLAASNKCCINGASTVVTAV----FGGVLQNE 321
Query: 331 EKGSDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF-DG 388
G TE+ + PFL L LD+P K + P L + L+ F D
Sbjct: 322 VNCLICG-------TESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDL 374
Query: 389 ETV--TEVVRPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKN 440
E + TE+ H + + + + +LPK + LH++RF + K T V FP++
Sbjct: 375 EELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRG 434
Query: 441 LELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
L++K Y L P+ + YDL A +VH G G G Y +
Sbjct: 435 LDMKCY--LLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYA 476
>gi|428180637|gb|EKX49504.1| hypothetical protein GUITHDRAFT_47981, partial [Guillardia theta
CCMP2712]
Length = 316
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 126/317 (39%), Gaps = 30/317 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY------RHCKSPLVHRFGDLTRKIW 245
VGL N+ T F+N IQ L V P R+FFL + + L FG+L KIW
Sbjct: 3 VGLQNLGNTCFLNACIQCLAAVPPFRDFFLSNHHIFRLDTGSSMRGTLALSFGELLHKIW 62
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKN-TSII 304
+ + L+ + +F Q + EF+ +LL+ LH DL+ + +
Sbjct: 63 QGEPYSSVSA--AILKDRVSKFAPQFTGCRQHDSQEFLRFLLDGLHEDLKTSDNDEMRQF 120
Query: 305 YECFQGELEVV----KEIPKNTISGNDQ-NTEKGSDGGDDHDNITTET----SRM--PFL 353
E +V + +P + D + + GG I T SR PFL
Sbjct: 121 MEVRMAHDQVASKYNESMPAMEMYCLDNLSCVTAAFGGQLVSQIECRTCSHQSRCYDPFL 180
Query: 354 MLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE---------VVRPHVARMRY 404
+ L +P P FK+ E+ P+ L + F + V E A +
Sbjct: 181 DISLPIPSPSQFKEGQEQAHRPRCHLTDCFNLFTEKEVLEGENMYSCPNCNSRSCATKQL 240
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+ LP ++LH++RF+ EK T + FP L+L + + T + YDL
Sbjct: 241 KFVSLPPILVLHIKRFSYTEVSREKLVTSLEFPKAGLDLSPF-AVETGSGEREYPPIYDL 299
Query: 465 IANIVHDGKPEGGFYRV 481
+ +H G GG Y
Sbjct: 300 KSVALHVGGMAGGHYHA 316
>gi|315468039|ref|NP_001186800.1| ubiquitin specific peptidase 3 [Danio rerio]
Length = 524
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 114/495 (23%), Positives = 175/495 (35%), Gaps = 133/495 (26%)
Query: 104 DCPYLDTVNRQVLDFDFEKF---------CSVSLSNLNVYACLVCGKYYQGRGQKSHAYT 154
+CP+L++ + D +F CSV SN + + CL C + GR HA
Sbjct: 2 ECPHLNS--SVCMTVDLTRFPNGSPSSWCCSVCRSNKSPWVCLTCMNVHCGRYVNGHAKK 59
Query: 155 H--SLEA------------------GHHVYINLRTEKVYCLP-DGYEINDPSLEDIRHV- 192
H +EA H V ++ + +C D + +ND L ++ V
Sbjct: 60 HFEEIEAPGCSQRKPDREKLREKGQQHSVCMDCNSYSTFCYKCDEFVVNDTKLGHVQRVR 119
Query: 193 --------------------------------------------GLNNIKETDFVNVTIQ 208
GL N+ T F+N +Q
Sbjct: 120 EHLQSLENSVCNTDRQRKRKMSESFSPDSKMKQDSEGALVQCATGLRNLGNTCFMNAILQ 179
Query: 209 SLMRVTPLRNFF------------LIPENYRHCKS------PLVHRFGDLTRKIWHARNF 250
SL + +F H +S LV F +W
Sbjct: 180 SLSNIQVFSCYFKELPSVALRSGKTAGRRMYHTRSQGDSSVSLVEEFRKTLCSLWQGS-- 237
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK----------- 299
+ SP + K FR Q + EF+ +LL+ LH +++ K
Sbjct: 238 QTAFSPDALFYVIWKIMPS-FRGYQQQDAHEFLRYLLDHLHREMQGNKNGSPSPPVTSDE 296
Query: 300 -NTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-PFLMLGL 357
N + +CF + I + G QN G TE+ + PFL L L
Sbjct: 297 PNHASESKCF---INGTSTIVTSVFGGVLQNEVYCLICG-------TESRKFDPFLDLSL 346
Query: 358 DLPPPPLFKDVMEKNIIPQVPLFNILKKF-DGETV--TEVVRPHVARMR------YRVTR 408
D+P K ++ P L + L+ F D E + TE+ H + R + + +
Sbjct: 347 DIPNQFRIKTTKDQEPGPTCTLSDCLRSFTDLEELDETELYMCHKCKKRQKSTKKFWIQK 406
Query: 409 LPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANI 468
LPK + LH++RF F K T V FP+ L++K Y L P+ + R YDL A +
Sbjct: 407 LPKVLCLHLKRFHWTAFLRNKVDTYVEFPMCGLDMKSY--LLEPENSLPERCLYDLAAVV 464
Query: 469 VHDGKPEG-GFYRVF 482
VH G G G Y +
Sbjct: 465 VHHGSGIGSGHYTAY 479
>gi|47225852|emb|CAF98332.1| unnamed protein product [Tetraodon nigroviridis]
Length = 511
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 112/447 (25%), Positives = 163/447 (36%), Gaps = 120/447 (26%)
Query: 124 CSVSLSNLNVYACLVC-----GKYYQGRGQKSHAYTHSL------------EAGHH-VYI 165
CSV SN + + CL C G+Y G +K T ++ E HH V +
Sbjct: 29 CSVCRSNKSPWICLTCLVVHCGRYVNGHAKKHFEETQAVGVSQRKNDKQEKEKYHHCVCM 88
Query: 166 NLRTEKVYCL-PDGYEINDP-------------SLEDI---------------------- 189
+ + V+C D + +ND SLE I
Sbjct: 89 DCSSYSVFCYRCDDFVVNDTKLGQVQKAREHLQSLETITSMSDRQRKRKLQESLAPDSKL 148
Query: 190 --------RHVGLNNIKETDFVNVTIQSLMRVTPLRNFF--LIPENYRHCKSP------- 232
R GL N+ T F+N +QSL + +F L + R K+
Sbjct: 149 VKERWDCSRCTGLRNLGNTCFMNAILQSLSNIEQFSCYFKELPAVSLRSGKTAGRRMYHT 208
Query: 233 ---------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFM 283
LV F +W + SP + K FR Q + EFM
Sbjct: 209 RSQGESSVSLVEEFRKTLCSLWQGS--QTAFSPDSLFYTIWKIMPS-FRGYQQQDAHEFM 265
Query: 284 SWLLNTLHSDLRNTKKNTSIIYE--------------CFQGELEVVKEIPKNTISGNDQN 329
+LL+ LH +L+N++ S C G VV I G QN
Sbjct: 266 RYLLDHLHRELQNSRNGASHTASPQDGVRLTAADGKCCINGTASVVTSI----FGGILQN 321
Query: 330 TEKGSDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF-D 387
G TE+ + PFL L LD+P K ++ P L + L+ F D
Sbjct: 322 EVNCLICG-------TESRKFDPFLDLSLDIPSQFRQKRSKDQEPGPTCTLSDCLRSFTD 374
Query: 388 GETV--TEVVRPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVK 439
E + TE+ H + R + V +LPK + LH++RF F K T V FP+K
Sbjct: 375 LEELDDTELYFCHKCKKRQKSTKKFWVQKLPKVLCLHLKRFHWTAFLRNKIDTYVEFPLK 434
Query: 440 NLELKDYIPLPTPKENEKLRSKYDLIA 466
L+++ Y L P+ + YDL+A
Sbjct: 435 GLDMRGY--LLEPENSLPESCVYDLVA 459
>gi|345316872|ref|XP_003429803.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Ornithorhynchus
anatinus]
Length = 494
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 114/440 (25%), Positives = 163/440 (37%), Gaps = 98/440 (22%)
Query: 124 CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAG----------------HHVYINL 167
CSV SN + + CL C + GR HA H +A H V ++
Sbjct: 29 CSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQIPLNNHKKTEKQEKVQHTVCMDC 88
Query: 168 RTEKVYCLPDGYEI-----NDPSLED---------------IRHVGLNNIKETDFVNVTI 207
+ YC I PS+ + GL N+ T F+N +
Sbjct: 89 SSYSTYCTGPPLLILLLHNEAPSVTSSLRSRLLKINGSTTALCATGLRNLGNTCFMNAIL 148
Query: 208 QSLMRV------------TPLRNFFLIPENYRHCKS------PLVHRFGDLTRKIWHARN 249
QSL + LRN H +S LV F +W
Sbjct: 149 QSLSNIQQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGS- 207
Query: 250 FKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR---NTKKNTSIIYE 306
+ SP V K FR Q + EFM +LL+ LH +L+ N + I+ E
Sbjct: 208 -QTAFSPESLFYVVWKI-MPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSVILQE 265
Query: 307 ----------CFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-PFLML 355
C G VV I G QN G TE+ + PFL L
Sbjct: 266 NSGLSASNKCCINGASTVVTAI----FGGILQNEVNCLICG-------TESRKFDPFLDL 314
Query: 356 GLDLPPPPLFKDVMEKNI--IPQVPLFNILKKF-DGETV--TEVVRPHVARMR------Y 404
LD+P F++ KN P L + L+ F D E + TE+ H + + +
Sbjct: 315 SLDIPSQ--FRNKRSKNQENGPMCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKF 372
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+ +LPK + LH++RF + K T V FP++ L++K Y L P+ + YDL
Sbjct: 373 WIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY--LLEPENSGPESCLYDL 430
Query: 465 IANIVHDGKPEG-GFYRVFV 483
A +VH G G G Y +
Sbjct: 431 AAVVVHHGSGVGSGHYTAYA 450
>gi|395822291|ref|XP_003784454.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1
[Otolemur garnettii]
Length = 520
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 114/464 (24%), Positives = 166/464 (35%), Gaps = 120/464 (25%)
Query: 124 CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAG----------------HHVYINL 167
CSV SN + + CL C + GR HA H +A H V ++
Sbjct: 29 CSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQIPLTNHKKSEKQDKVQHTVCMDC 88
Query: 168 RTEKVYCL-PDGYEINDPSLEDIRHV---------------------------------- 192
+ YC D + +ND L ++ V
Sbjct: 89 SSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFIADRHRKRKLVENSSLNSKLLK 148
Query: 193 -----------GLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYRHC 229
GL N+ T F+N +QSL + LRN H
Sbjct: 149 VNGSTAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHT 208
Query: 230 KS------PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFM 283
+S LV F +W + SP V K FR Q + EFM
Sbjct: 209 RSQGDNNVSLVEEFRKTLCALWQGS--QTAFSPESLFYVVWKI-MPNFRGYQQQDAHEFM 265
Query: 284 SWLLNTLHSDLR---NTKKNTSIIYE----------CFQGELEVVKEIPKNTISGNDQNT 330
+LL+ LH +L+ N +++I+ E C G VV I G QN
Sbjct: 266 RYLLDHLHLELQDGFNGVSHSAILQENSTLSTSNKCCINGSSTVVTAI----FGGILQNE 321
Query: 331 EKGSDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF-DG 388
G TE+ + PFL L LD+P K + P L + L+ F D
Sbjct: 322 VNCLICG-------TESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDL 374
Query: 389 ETV--TEVVRPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKN 440
E + TE+ H + + + + +LPK + LH++RF + K T V FP++
Sbjct: 375 EELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRG 434
Query: 441 LELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
L++K Y L P+ + YDL A +VH G G G Y +
Sbjct: 435 LDMKCY--LLEPENSGPENCLYDLAAVVVHHGSGVGSGHYTAYA 476
>gi|443706691|gb|ELU02606.1| hypothetical protein CAPTEDRAFT_165719 [Capitella teleta]
Length = 515
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 111/450 (24%), Positives = 162/450 (36%), Gaps = 104/450 (23%)
Query: 124 CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAG--HHVYINLRTEKVYC-LPDGYE 180
CSV +N +++ CL CG GR HA +H E H V ++ ++C + D +
Sbjct: 30 CSVCKTNKSLWLCLCCGLVSCGRYIAGHAKSHHKEKEPLHSVCLDCHNMAIFCYICDEFV 89
Query: 181 IND----------PSLEDI----------------------------------------- 189
IND L+DI
Sbjct: 90 INDTPNGDIEKIRSRLQDISASAENQTKENRQLRRRCSSDSTSTENSRKRQKKTDDKKRL 149
Query: 190 RHVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-IPE----------NYRHCKSP----LV 234
R GL N+ T F+N +QSL + + +P R C +V
Sbjct: 150 RRSGLRNLGNTCFMNAVLQSLSNIQTFCGYIQQLPSLEQKMSKKKITTRSCTEGNDVFVV 209
Query: 235 HRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+W K +SP + K RFR Q + EFM +LL+ LH++L
Sbjct: 210 EELRKTLVALWQGS--KAAISPESLFSVIWKVVP-RFRGYQQQDAHEFMRYLLDRLHTEL 266
Query: 295 RN------TKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETS 348
T + S G+ VV I + G + HD
Sbjct: 267 MTLIPYNATVRPNSPYVGSPLGKSSVVTAIFGGILQSEVNCLICGMES-KKHD------- 318
Query: 349 RMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF-DGETV--TEVVRPHVARMRYR 405
PFL + LD+P K KN L + L F D E + TE+ + R R
Sbjct: 319 --PFLDISLDIPSKFTCKTPNPKNGEIVCDLSDCLSSFTDVEELEDTELYMCANCKCRQR 376
Query: 406 VT------RLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEK-- 457
T RLP + LH++RF + + K T +NFP++ LE+ ++ L E
Sbjct: 377 STKKFWIRRLPNVLCLHLKRFRWSTYLRVKVDTHINFPLRGLEMNHFM-LDNLHETRNSS 435
Query: 458 ---LRSKYDLIANIVHDGKPEG-GFYRVFV 483
+SKYDL A +VH G G G Y +
Sbjct: 436 ASGSQSKYDLAAVVVHHGSGAGSGHYTSYA 465
>gi|388453361|ref|NP_001252999.1| ubiquitin carboxyl-terminal hydrolase 3 [Macaca mulatta]
gi|383423389|gb|AFH34908.1| ubiquitin carboxyl-terminal hydrolase 3 [Macaca mulatta]
gi|384939762|gb|AFI33486.1| ubiquitin carboxyl-terminal hydrolase 3 [Macaca mulatta]
Length = 520
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 120/493 (24%), Positives = 175/493 (35%), Gaps = 131/493 (26%)
Query: 104 DCPYLDTVNRQVLDFDFEKF---------CSVSLSNLNVYACLVCGKYYQGRGQKSHAYT 154
+CP+L + + D KF CSV SN + + CL C + GR HA
Sbjct: 2 ECPHLSS--SVCIAPDAAKFPNGSPSSWCCSVCRSNKSPWVCLTCSSVHCGRYVNGHAKK 59
Query: 155 HSLEAG----------------HHVYINLRTEKVYCL-PDGYEINDPSLEDIRHV----- 192
H +A H V ++ + YC D + +ND L ++ V
Sbjct: 60 HYEDAQVPLTNHKKSEKQDKAQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQ 119
Query: 193 ----------------------------------------GLNNIKETDFVNVTIQSLMR 212
GL N+ T F+N +QSL
Sbjct: 120 NLENSAFTADRHRKRKLLENSTLNSKLLKVNGSTTAICATGLRNLGNTCFMNAILQSLSN 179
Query: 213 V------------TPLRNFFLIPENYRHCKS------PLVHRFGDLTRKIWHARNFKGQV 254
+ LRN H +S LV F +W +
Sbjct: 180 IEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGS--QTAF 237
Query: 255 SPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR---NTKKNTSIIYE----- 306
SP V K FR Q + EFM +LL+ LH +L+ N ++I+ E
Sbjct: 238 SPESLFYVVWKI-MPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLS 296
Query: 307 -----CFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-PFLMLGLDLP 360
C G VV I G QN G TE+ + PFL L LD+P
Sbjct: 297 ASNKCCINGASTVVTAI----FGGILQNEVNCLICG-------TESRKFDPFLDLSLDIP 345
Query: 361 PPPLFKDVMEKNIIPQVPLFNILKKF-DGETV--TEVVRPHVARMR------YRVTRLPK 411
K + P L + L+ F D E + TE+ H + + + + +LPK
Sbjct: 346 SQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPK 405
Query: 412 YMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHD 471
+ LH++RF + K T V FP++ L++K Y L P+ + YDL A +VH
Sbjct: 406 VLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY--LLEPENSGPESCLYDLAAVVVHH 463
Query: 472 GKPEG-GFYRVFV 483
G G G Y +
Sbjct: 464 GSGVGSGHYTAYA 476
>gi|332235881|ref|XP_003267133.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1
[Nomascus leucogenys]
Length = 520
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 114/464 (24%), Positives = 165/464 (35%), Gaps = 120/464 (25%)
Query: 124 CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTH----------------SLEAGHHVYINL 167
CSV SN + + CL C + GR HA H +A H V ++
Sbjct: 29 CSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQVPLTNHKKSEKQEKAQHTVCMDC 88
Query: 168 RTEKVYCL-PDGYEINDPSLEDIRHV---------------------------------- 192
+ YC D + +ND L ++ V
Sbjct: 89 SSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHRKRKLLENSTLNSKLLK 148
Query: 193 -----------GLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYRHC 229
GL N+ T F+N +QSL + LRN H
Sbjct: 149 VNGSTTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHT 208
Query: 230 KS------PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFM 283
+S LV F +W + SP V K FR Q + EFM
Sbjct: 209 RSQGDNNVSLVEEFRKTLCALWQGS--QTAFSPESLFYVVWKI-MPNFRGYQQQDAHEFM 265
Query: 284 SWLLNTLHSDLR---NTKKNTSIIYE----------CFQGELEVVKEIPKNTISGNDQNT 330
+LL+ LH +L+ N ++I+ E C G VV I G QN
Sbjct: 266 RYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAI----FGGILQNE 321
Query: 331 EKGSDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF-DG 388
G TE+ + PFL L LD+P K + P L + L+ F D
Sbjct: 322 VNCLICG-------TESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDL 374
Query: 389 ETV--TEVVRPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKN 440
E + TE+ H + + + + +LPK + LH++RF + K T V FP++
Sbjct: 375 EELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRG 434
Query: 441 LELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
L++K Y L P+ + YDL A +VH G G G Y +
Sbjct: 435 LDMKCY--LLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYA 476
>gi|196001277|ref|XP_002110506.1| hypothetical protein TRIADDRAFT_22897 [Trichoplax adhaerens]
gi|190586457|gb|EDV26510.1| hypothetical protein TRIADDRAFT_22897 [Trichoplax adhaerens]
Length = 477
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 107/447 (23%), Positives = 161/447 (36%), Gaps = 134/447 (29%)
Query: 134 YACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLP-DGYEINDP---SLEDI 189
+ CL CG GR K HA H + H VYC D Y IND ++ I
Sbjct: 37 WICLSCGNISCGRYVKGHAKKHYEDLNQHCLCLDPAFAVYCYSCDEYIINDSEDNKIQKI 96
Query: 190 RH------------------------------------------VGLNNIKETDFVNVTI 207
R +GL N+ T ++N +
Sbjct: 97 RDQLQSNLERLNKIDAKRYAKNISSLKIVPSVLFIIVSTSAYQILGLKNLGNTCYLNAIL 156
Query: 208 QSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLT----RKIWHARNFKGQ---------- 253
QSL + P +F F LT RK HA N + Q
Sbjct: 157 QSLSNIDPFCRYF--------------KTFRSLTDSDPRKEKHAHNTRAQGDNVCIVDEL 202
Query: 254 ---------------VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR--- 295
SP+ FL A+ K RFR Q + EFM +LL+ LH++L
Sbjct: 203 RKVLDGLGEISSSSYYSPNSFLTAICKLIP-RFRGYHQQDAHEFMRYLLDRLHTELGRMR 261
Query: 296 -----NTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM 350
N + + +I+ F+G L + E+ N + T+
Sbjct: 262 APYYGNKQVSNTIVTTLFRGSL--LNEVNCLVCDINSRKTD------------------- 300
Query: 351 PFLMLGLDLPPPPLFK--DVMEKNIIPQVPLFNILKKF-------DGET--VTEVVRPHV 399
FL L LD+P + + + N I L + L F D E + + +
Sbjct: 301 SFLDLSLDIPSEFISRRNKSIGDNDISICKLTDCLSSFTELEKLEDSELYYCSSCTKKQL 360
Query: 400 ARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLR 459
+ + R+ LP+ + LH++RF ++ +K V FP+ L++K Y+ L K+ R
Sbjct: 361 STKQLRIKTLPRVLCLHLKRFRWSSCIRKKLDIYVEFPMIGLDMKPYLTL---KQTSNGR 417
Query: 460 SKYDLIANIVHDGKPEG-GFYRVFVQR 485
S YDLIA + H G G G Y + +
Sbjct: 418 SMYDLIAVVEHHGSGYGSGHYTAYAYK 444
>gi|21450103|ref|NP_659186.1| ubiquitin carboxyl-terminal hydrolase 3 [Mus musculus]
gi|30580632|sp|Q91W36.1|UBP3_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 3; AltName:
Full=Deubiquitinating enzyme 3; AltName: Full=Ubiquitin
thioesterase 3; AltName:
Full=Ubiquitin-specific-processing protease 3
gi|16877850|gb|AAH17156.1| Ubiquitin specific peptidase 3 [Mus musculus]
gi|26327065|dbj|BAC27276.1| unnamed protein product [Mus musculus]
gi|148694176|gb|EDL26123.1| ubiquitin specific peptidase 3 [Mus musculus]
Length = 520
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 120/493 (24%), Positives = 175/493 (35%), Gaps = 131/493 (26%)
Query: 104 DCPYLDTVNRQVLDFDFEKF---------CSVSLSNLNVYACLVCGKYYQGRGQKSHAYT 154
+CP+L + + D KF CSV SN + + CL C + GR HA
Sbjct: 2 ECPHLSS--SVCIAPDSAKFPNGSPSSWCCSVCRSNKSPWVCLTCSSVHCGRYVNGHAKK 59
Query: 155 H----------------SLEAGHHVYINLRTEKVYCL-PDGYEINDPSLEDIRHV----- 192
H +A H V ++ + YC D + +ND L ++ V
Sbjct: 60 HYEDAQIPLLNHKRSEKQEKAQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQ 119
Query: 193 ----------------------------------------GLNNIKETDFVNVTIQSLMR 212
GL N+ T F+N +QSL
Sbjct: 120 NLENSAFTADRHRKRKLLENSSLNSKLLKVNGSTTAICATGLRNLGNTCFMNAILQSLSN 179
Query: 213 V------------TPLRNFFLIPENYRHCKS------PLVHRFGDLTRKIWHARNFKGQV 254
+ LRN H +S LV F +W +
Sbjct: 180 IEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDSNVSLVEEFRKTLCALWQGS--QTAF 237
Query: 255 SPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR---NTKKNTSIIYE----- 306
SP V K FR Q + EFM +LL+ LH +L+ N ++I+ E
Sbjct: 238 SPESLFYVVWKI-MPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLS 296
Query: 307 -----CFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-PFLMLGLDLP 360
C G VV I G QN G TE+ + PFL L LD+P
Sbjct: 297 ASNKCCINGASTVVTAI----FGGILQNEVNCLICG-------TESRKFDPFLDLSLDIP 345
Query: 361 PPPLFKDVMEKNIIPQVPLFNILKKF-DGETV--TEVVRPHVARMR------YRVTRLPK 411
K + P L + L+ F D E + TE+ H + + + + +LPK
Sbjct: 346 SQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPK 405
Query: 412 YMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHD 471
+ LH++RF + K T V FP++ L++K Y L P+ + YDL A +VH
Sbjct: 406 ALCLHLKRFHWTAYLRNKVDTYVQFPLRGLDMKCY--LLEPENSGPDSCLYDLAAVVVHH 463
Query: 472 GKPEG-GFYRVFV 483
G G G Y +
Sbjct: 464 GSGVGSGHYTAYA 476
>gi|297696821|ref|XP_002825578.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 3 [Pongo
abelii]
Length = 520
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 114/464 (24%), Positives = 165/464 (35%), Gaps = 120/464 (25%)
Query: 124 CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAG----------------HHVYINL 167
CSV SN + + CL C + GR HA H +A H V ++
Sbjct: 29 CSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQVPLTNHKKSEKQDKAQHTVCMDC 88
Query: 168 RTEKVYCL-PDGYEINDPSLEDIRHV---------------------------------- 192
+ YC D + +ND L ++ V
Sbjct: 89 SSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHRKRKLLENSTLNSKLLK 148
Query: 193 -----------GLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYRHC 229
GL N+ T F+N +QSL + LRN H
Sbjct: 149 VNGSTTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHT 208
Query: 230 KS------PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFM 283
+S LV F +W + SP V K FR Q + EFM
Sbjct: 209 RSQGDNNVSLVEEFRKTLCALWQGS--QTAFSPESLFYVVWKI-MPNFRGYQQQDAHEFM 265
Query: 284 SWLLNTLHSDLR---NTKKNTSIIYE----------CFQGELEVVKEIPKNTISGNDQNT 330
+LL+ LH +L+ N ++I+ E C G VV I G QN
Sbjct: 266 RYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAI----FGGILQNE 321
Query: 331 EKGSDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF-DG 388
G TE+ + PFL L LD+P K + P L + L+ F D
Sbjct: 322 VNCLICG-------TESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDL 374
Query: 389 ETV--TEVVRPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKN 440
E + TE+ H + + + + +LPK + LH++RF + K T V FP++
Sbjct: 375 EELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRG 434
Query: 441 LELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
L++K Y L P+ + YDL A +VH G G G Y +
Sbjct: 435 LDMKCY--LLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYA 476
>gi|410212190|gb|JAA03314.1| ubiquitin specific peptidase 3 [Pan troglodytes]
gi|410255768|gb|JAA15851.1| ubiquitin specific peptidase 3 [Pan troglodytes]
gi|410292238|gb|JAA24719.1| ubiquitin specific peptidase 3 [Pan troglodytes]
gi|410334293|gb|JAA36093.1| ubiquitin specific peptidase 3 [Pan troglodytes]
Length = 520
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 114/464 (24%), Positives = 165/464 (35%), Gaps = 120/464 (25%)
Query: 124 CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAG----------------HHVYINL 167
CSV SN + + CL C + GR HA H +A H V ++
Sbjct: 29 CSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQVPLTNHKKSEKQDKAQHTVCMDC 88
Query: 168 RTEKVYCL-PDGYEINDPSLEDIRHV---------------------------------- 192
+ YC D + +ND L ++ V
Sbjct: 89 SSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHRKRKLLENSTLNSKLLK 148
Query: 193 -----------GLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYRHC 229
GL N+ T F+N +QSL + LRN H
Sbjct: 149 VNGSTTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHT 208
Query: 230 KS------PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFM 283
+S LV F +W + SP V K FR Q + EFM
Sbjct: 209 RSQGDNNVSLVEEFRKTLCALWQGS--QTAFSPESLFYVVWKI-MPNFRGYQQQDAHEFM 265
Query: 284 SWLLNTLHSDLR---NTKKNTSIIYE----------CFQGELEVVKEIPKNTISGNDQNT 330
+LL+ LH +L+ N ++I+ E C G VV I G QN
Sbjct: 266 RYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAI----FGGILQNE 321
Query: 331 EKGSDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF-DG 388
G TE+ + PFL L LD+P K + P L + L+ F D
Sbjct: 322 VNCLICG-------TESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDL 374
Query: 389 ETV--TEVVRPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKN 440
E + TE+ H + + + + +LPK + LH++RF + K T V FP++
Sbjct: 375 EELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRG 434
Query: 441 LELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
L++K Y L P+ + YDL A +VH G G G Y +
Sbjct: 435 LDMKCY--LLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYA 476
>gi|345795041|ref|XP_544715.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1 [Canis
lupus familiaris]
Length = 520
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 116/466 (24%), Positives = 168/466 (36%), Gaps = 124/466 (26%)
Query: 124 CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAG----------------HHVYINL 167
CSV SN + + CL C + GR HA H +A H V ++
Sbjct: 29 CSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQVPLTNHKKSEKQDKPQHTVCMDC 88
Query: 168 RTEKVYCL-PDGYEINDPSLEDIRHV---------------------------------- 192
+ YC D + +ND L ++ V
Sbjct: 89 SSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHRKRKLLENSSLNSKLLK 148
Query: 193 -----------GLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYRHC 229
GL N+ T F+N +QSL + LRN H
Sbjct: 149 VNGSTAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHT 208
Query: 230 KS------PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFM 283
+S LV F +W + SP V K FR Q + EFM
Sbjct: 209 RSQGDNNVSLVEEFRKTLCALWQGS--QTAFSPESLFYVVWKI-MPNFRGYQQQDAHEFM 265
Query: 284 SWLLNTLHSDLR---NTKKNTSIIYE----------CFQGELEVVKEIPKNTISGNDQNT 330
+LL+ LH +L+ N ++I+ E C G VV I G QN
Sbjct: 266 RYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAI----FGGILQNE 321
Query: 331 EKGSDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNI--IPQVPLFNILKKF- 386
G TE+ + PFL L LD+P F++ KN P L + L+ F
Sbjct: 322 VNCLICG-------TESRKFDPFLDLSLDIPSQ--FRNKRSKNQENGPVCSLRDCLRSFT 372
Query: 387 DGETV--TEVVRPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPV 438
D E + TE+ H + + + + +LPK + LH++RF + K T V FP+
Sbjct: 373 DLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPL 432
Query: 439 KNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
+ L++K Y L P+ + YDL A +VH G G G Y +
Sbjct: 433 RGLDMKCY--LLEPENSGPEHCLYDLAAVVVHHGSGVGSGHYTAYA 476
>gi|296213409|ref|XP_002753258.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1
[Callithrix jacchus]
Length = 520
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 114/464 (24%), Positives = 165/464 (35%), Gaps = 120/464 (25%)
Query: 124 CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAG----------------HHVYINL 167
CSV SN + + CL C + GR HA H +A H V ++
Sbjct: 29 CSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQVPLTNHKKSEKQDKAQHTVCMDC 88
Query: 168 RTEKVYCL-PDGYEINDPSLEDIRHV---------------------------------- 192
+ YC D + +ND L ++ V
Sbjct: 89 SSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHRKRKLLENSTLNSKLLK 148
Query: 193 -----------GLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYRHC 229
GL N+ T F+N +QSL + LRN H
Sbjct: 149 VNGSTTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHT 208
Query: 230 KS------PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFM 283
+S LV F +W + SP V K FR Q + EFM
Sbjct: 209 RSQGDSNVSLVEEFRKTLCALWQGS--QTAFSPESLFYVVWKI-MPNFRGYQQQDAHEFM 265
Query: 284 SWLLNTLHSDLR---NTKKNTSIIYE----------CFQGELEVVKEIPKNTISGNDQNT 330
+LL+ LH +L+ N ++I+ E C G VV I G QN
Sbjct: 266 RYLLDHLHLELQGGFNGVSRSAILQENSTLFASNKCCINGASTVVTAI----FGGILQNE 321
Query: 331 EKGSDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF-DG 388
G TE+ + PFL L LD+P K + P L + L+ F D
Sbjct: 322 VNCLICG-------TESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDL 374
Query: 389 ETV--TEVVRPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKN 440
E + TE+ H + + + + +LPK + LH++RF + K T V FP++
Sbjct: 375 EELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRG 434
Query: 441 LELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
L++K Y L P+ + YDL A +VH G G G Y +
Sbjct: 435 LDMKCY--LLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYA 476
>gi|363737872|ref|XP_413755.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Gallus gallus]
Length = 520
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 113/464 (24%), Positives = 165/464 (35%), Gaps = 120/464 (25%)
Query: 124 CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAG----------------HHVYINL 167
CSV SN + + CL C + GR HA H +A H V ++
Sbjct: 29 CSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQIPMTNHKKTEKQEKVQHTVCMDC 88
Query: 168 RTEKVYCL-PDGYEINDPSLEDIRHV---------------------------------- 192
+ YC D + +ND L ++ V
Sbjct: 89 SSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTSDRHRKRKLLENSSLNSKLLK 148
Query: 193 -----------GLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYRHC 229
GL N+ T F+N +QSL + LRN H
Sbjct: 149 VNGSTTALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYHT 208
Query: 230 KS------PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFM 283
+S LV F +W + SP V K FR Q + EFM
Sbjct: 209 RSQGDNNVSLVEEFRKTLCALWQGS--QTAFSPESLFYVVWKI-MPNFRGYQQQDAHEFM 265
Query: 284 SWLLNTLHSDLRN----------TKKNTSIIYE---CFQGELEVVKEIPKNTISGNDQNT 330
+LL+ LH +L+ ++N+S+ C G VV I G QN
Sbjct: 266 RYLLDHLHLELQGGFNGVSRSVILQENSSLTASSKCCINGASTVVTAI----FGGILQNE 321
Query: 331 EKGSDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF-DG 388
G TE+ + PFL L LD+P K + P L + L+ F D
Sbjct: 322 VNCLICG-------TESRKFDPFLDLSLDIPSQFRNKRTKNQENGPMCTLRDCLRSFTDL 374
Query: 389 ETV--TEVVRPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKN 440
E + TE+ H + + + + +LPK + LH++RF + K T V FP++
Sbjct: 375 EELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRG 434
Query: 441 LELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
L++K Y L P+ + YDL A +VH G G G Y +
Sbjct: 435 LDMKCY--LLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYA 476
>gi|55770886|ref|NP_006528.2| ubiquitin carboxyl-terminal hydrolase 3 isoform 1 [Homo sapiens]
gi|205371844|sp|Q9Y6I4.2|UBP3_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 3; AltName:
Full=Deubiquitinating enzyme 3; AltName: Full=Ubiquitin
thioesterase 3; AltName:
Full=Ubiquitin-specific-processing protease 3
gi|17390251|gb|AAH18113.1| Ubiquitin specific peptidase 3 [Homo sapiens]
gi|30583377|gb|AAP35933.1| ubiquitin specific protease 3 [Homo sapiens]
gi|61359968|gb|AAX41792.1| ubiquitin specific protease 3 [synthetic construct]
gi|61359975|gb|AAX41793.1| ubiquitin specific protease 3 [synthetic construct]
gi|76828049|gb|AAI07138.1| Ubiquitin specific peptidase 3 [Homo sapiens]
gi|76828053|gb|AAI07139.1| Ubiquitin specific peptidase 3 [Homo sapiens]
gi|112180754|gb|AAH65300.1| Ubiquitin specific peptidase 3 [Homo sapiens]
gi|119598057|gb|EAW77651.1| ubiquitin specific peptidase 3 [Homo sapiens]
gi|123980244|gb|ABM81951.1| ubiquitin specific peptidase 3 [synthetic construct]
gi|123995059|gb|ABM85131.1| ubiquitin specific peptidase 3 [synthetic construct]
gi|168277636|dbj|BAG10796.1| ubiquitin carboxyl-terminal hydrolase 3 [synthetic construct]
Length = 520
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 114/464 (24%), Positives = 165/464 (35%), Gaps = 120/464 (25%)
Query: 124 CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAG----------------HHVYINL 167
CSV SN + + CL C + GR HA H +A H V ++
Sbjct: 29 CSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQVPLTNHKKSEKQDKVQHTVCMDC 88
Query: 168 RTEKVYCL-PDGYEINDPSLEDIRHV---------------------------------- 192
+ YC D + +ND L ++ V
Sbjct: 89 SSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHKKRKLLENSTLNSKLLK 148
Query: 193 -----------GLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYRHC 229
GL N+ T F+N +QSL + LRN H
Sbjct: 149 VNGSTTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHT 208
Query: 230 KS------PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFM 283
+S LV F +W + SP V K FR Q + EFM
Sbjct: 209 RSQGDNNVSLVEEFRKTLCALWQGS--QTAFSPESLFYVVWKI-MPNFRGYQQQDAHEFM 265
Query: 284 SWLLNTLHSDLR---NTKKNTSIIYE----------CFQGELEVVKEIPKNTISGNDQNT 330
+LL+ LH +L+ N ++I+ E C G VV I G QN
Sbjct: 266 RYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAI----FGGILQNE 321
Query: 331 EKGSDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF-DG 388
G TE+ + PFL L LD+P K + P L + L+ F D
Sbjct: 322 VNCLICG-------TESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDL 374
Query: 389 ETV--TEVVRPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKN 440
E + TE+ H + + + + +LPK + LH++RF + K T V FP++
Sbjct: 375 EELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRG 434
Query: 441 LELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
L++K Y L P+ + YDL A +VH G G G Y +
Sbjct: 435 LDMKCY--LLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYA 476
>gi|301756861|ref|XP_002914278.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Ailuropoda
melanoleuca]
gi|281347308|gb|EFB22892.1| hypothetical protein PANDA_002153 [Ailuropoda melanoleuca]
Length = 520
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 116/466 (24%), Positives = 168/466 (36%), Gaps = 124/466 (26%)
Query: 124 CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAG----------------HHVYINL 167
CSV SN + + CL C + GR HA H +A H V ++
Sbjct: 29 CSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQVPLTNHKKSEKQDKPQHTVCMDC 88
Query: 168 RTEKVYCL-PDGYEINDPSLEDIRHV---------------------------------- 192
+ YC D + +ND L ++ V
Sbjct: 89 SSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHRKRKLLENSSLNSKLLK 148
Query: 193 -----------GLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYRHC 229
GL N+ T F+N +QSL + LRN H
Sbjct: 149 VNGSTAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHT 208
Query: 230 KS------PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFM 283
+S LV F +W + SP V K FR Q + EFM
Sbjct: 209 RSQGDNNVSLVEEFRKTLCALWQGS--QTAFSPESLFYVVWKI-MPNFRGYQQQDAHEFM 265
Query: 284 SWLLNTLHSDLR---NTKKNTSIIYE----------CFQGELEVVKEIPKNTISGNDQNT 330
+LL+ LH +L+ N ++I+ E C G VV I G QN
Sbjct: 266 RYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAI----FGGILQNE 321
Query: 331 EKGSDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNI--IPQVPLFNILKKF- 386
G TE+ + PFL L LD+P F++ KN P L + L+ F
Sbjct: 322 VNCLICG-------TESRKFDPFLDLSLDIPSQ--FRNKRSKNQENGPVCSLRDCLRSFT 372
Query: 387 DGETV--TEVVRPH------VARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPV 438
D E + TE+ H + ++ + +LPK + LH++RF + K T V FP+
Sbjct: 373 DLEELDETELYMCHRCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPL 432
Query: 439 KNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
+ L++K Y L P+ + YDL A +VH G G G Y +
Sbjct: 433 RGLDMKCY--LLEPENSGPEHCLYDLAAVVVHHGSGVGSGHYTAYA 476
>gi|153792416|ref|NP_001093229.1| ubiquitin carboxyl-terminal hydrolase 3 [Equus caballus]
gi|148529824|gb|ABQ82144.1| ubiquitin specific peptidase 3 [Equus caballus]
Length = 520
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 116/466 (24%), Positives = 168/466 (36%), Gaps = 124/466 (26%)
Query: 124 CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAG----------------HHVYINL 167
CSV SN + + CL C + GR HA H +A H V ++
Sbjct: 29 CSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQTPLTNHKKSEKQDKAQHTVCMDC 88
Query: 168 RTEKVYCL-PDGYEINDPSLEDIRHV---------------------------------- 192
+ YC D + +ND L ++ V
Sbjct: 89 SSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHRKRKLLENSSLNSKLLK 148
Query: 193 -----------GLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYRHC 229
GL N+ T F+N +QSL + LRN H
Sbjct: 149 VNGSTTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHT 208
Query: 230 KS------PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFM 283
+S LV F +W + SP V K FR Q + EFM
Sbjct: 209 RSQGDNNVSLVEEFRKTLCALWQGS--QTAFSPESLFYVVWKI-MPNFRGYQQQDAHEFM 265
Query: 284 SWLLNTLHSDLR---NTKKNTSIIYE----------CFQGELEVVKEIPKNTISGNDQNT 330
+LL+ LH +L+ N ++I+ E C G VV I G QN
Sbjct: 266 RYLLDHLHLELQGGFNGVSRSAILQENSTLSPSNKCCINGASTVVTAI----FGGILQNE 321
Query: 331 EKGSDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNI--IPQVPLFNILKKF- 386
G TE+ + PFL L LD+P F++ KN P L + L+ F
Sbjct: 322 VNCLICG-------TESRKFDPFLDLSLDIPSQ--FRNKRSKNQENGPVCSLRDCLRSFT 372
Query: 387 DGETV--TEVVRPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPV 438
D E + TE+ H + + + + +LPK + LH++RF + K T V FP+
Sbjct: 373 DLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPL 432
Query: 439 KNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
+ L++K Y L P+ + YDL A +VH G G G Y +
Sbjct: 433 RGLDMKCY--LLEPENSGPENCLYDLAAVVVHHGSGVGSGHYTAYA 476
>gi|395326677|gb|EJF59084.1| cysteine proteinase [Dichomitus squalens LYAD-421 SS1]
Length = 1201
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 145/365 (39%), Gaps = 67/365 (18%)
Query: 175 LPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFF----------LIPE 224
+P Y + S I GL N+ T ++N TIQ L P FF ++
Sbjct: 827 IPSDYPVTYWSDTQIGTSGLKNLGNTCYMNSTIQCLSATVPFSRFFTDGRWKSAVNMV-- 884
Query: 225 NYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMS 284
N K L F ++ R +W G +SP F +++ + + F Q + EF+S
Sbjct: 885 NPMGTKGVLALAFANILRDMWQGEG--GTLSPVTFRRSICSHAPQ-FSGSEQHDSQEFLS 941
Query: 285 WLLNTLHSDLRNT--KKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGG----- 337
+LL+ LH DL K+N E + ELE ++P S + + D
Sbjct: 942 FLLDGLHEDLNRILQKRNIESTPE-REAELE---KLPTQIASEQEWQIYRMRDDSLIVDF 997
Query: 338 ------DDHDNIT---TETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDG 388
+ + +T T T+ F+ L L +P +V L + + F
Sbjct: 998 FQGQYRNRMECLTCHKTSTTYNTFMYLTLPIP----------TGRASKVTLQHCIDAFVK 1047
Query: 389 ETVTEVVR----PHVARMR-----YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVK 439
E V E PH +R ++RLP +++H++RF+ F +K T V FP+K
Sbjct: 1048 EEVMEKSDAWNCPHCKALRKATKQLSLSRLPPVLLIHLKRFSAKGPFTDKIETFVEFPLK 1107
Query: 440 NLELKDYIPLPTPKENEKLRS-------------KYDLIANIVHDGKPEGGFYRVFVQRK 486
L+L +Y+P P P + +YDL A H G G Y F+ +
Sbjct: 1108 GLDLTNYMPPPLPPGAIGVPPLSPDDPRCQLPPYRYDLYAVTNHFGTLSTGHYTAFIASR 1167
Query: 487 SEELW 491
L+
Sbjct: 1168 GGWLY 1172
>gi|344293364|ref|XP_003418393.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Loxodonta
africana]
Length = 520
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 117/466 (25%), Positives = 167/466 (35%), Gaps = 124/466 (26%)
Query: 124 CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAG----------------HHVYINL 167
CSV SN + + CL C + GR HA H +A H V ++
Sbjct: 29 CSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQVPLTNHKKSEKQDKAQHTVCMDC 88
Query: 168 RTEKVYCL-PDGYEINDPSLEDIRHV---------------------------------- 192
+ YC D + +ND L ++ V
Sbjct: 89 SSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHRKRKLLENSSLNSKLLK 148
Query: 193 -----------GLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYRHC 229
GL N+ T F+N +QSL + LRN H
Sbjct: 149 VNGSTTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHT 208
Query: 230 KS------PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFM 283
+S LV F +W SP V K FR Q + EFM
Sbjct: 209 RSQGDNNVSLVEEFRKTLCALWQGS--PTAFSPESLFYVVWKI-MPNFRGYQQQDAHEFM 265
Query: 284 SWLLNTLHSDLR---NTKKNTSIIYE----------CFQGELEVVKEIPKNTISGNDQNT 330
+LL+ LH +L+ N ++I+ E C G VV I G QN
Sbjct: 266 RYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAI----FGGVLQNE 321
Query: 331 EKGSDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNI--IPQVPLFNILKKF- 386
G TE+ + PFL L LD+P F++ KN P L + L+ F
Sbjct: 322 VNCLICG-------TESRKFDPFLDLSLDIPSQ--FRNKRSKNQENGPVCSLRDCLRSFT 372
Query: 387 DGETV--TEVVRPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPV 438
D E + TE+ H + + + + +LPK + LH++RF + K T V FP+
Sbjct: 373 DLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPL 432
Query: 439 KNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
+ L++K Y L P+ + YDL A +VH G G G Y F
Sbjct: 433 RGLDMKCY--LLEPENSGPENCLYDLAAVVVHHGSGVGSGHYTAFA 476
>gi|406698097|gb|EKD01342.1| ubiquitin-specific protease [Trichosporon asahii var. asahii CBS
8904]
Length = 1243
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 138/342 (40%), Gaps = 55/342 (16%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T ++N TIQ L P FFL N + L H F +L
Sbjct: 883 TGLKNLGNTCYMNSTIQCLSATLPFARFFLDGHYKKEVNLTNTLGTRGNLAHAFAELLSA 942
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W + +SP F Q + K F Q + EF+S++++ LH DL +
Sbjct: 943 LW--KEHYTFLSPITFRQKSIINFKSDFAGTEQHDSQEFLSFVMDGLHEDLNRVRVKPKP 1000
Query: 304 IYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTE-TSRMPFL----MLGLD 358
+ Q E E+ + +P S + K + D + +RM L L LD
Sbjct: 1001 VEMTPQREAEL-ETLPPQIASDKEWAIYKQRNDSFIVDVFQGQYMNRMECLTCHKWLTLD 1059
Query: 359 LPP---PPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYR---------- 405
LP P + ++ ++ + P++ DG+ +R ++ YR
Sbjct: 1060 LPTSRKPIVLPELFDRYVQPEI--------LDGDDKCPKLRQLRPKLTYRFCPRCKKNRR 1111
Query: 406 ------VTRLPKYMILHMRRFTKNNF--FVEKNPTLVNFPVKNLELKDYIPLPTPKENEK 457
+ RLP +++ ++RF N F +K+ T V FP+KNL+L Y+P+ P E
Sbjct: 1112 ASKTMTIVRLPPVLMIQLKRFLPVNGGQFWDKSDTPVIFPLKNLDLTRYVPVRQPNGTED 1171
Query: 458 LRS--------KYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
L KYDL A H G G Y FV K + W
Sbjct: 1172 LDDPRTQIGPFKYDLYAVSNHMGTLSSGHYTAFV--KGSDHW 1211
>gi|291402890|ref|XP_002718220.1| PREDICTED: ubiquitin thiolesterase 3 [Oryctolagus cuniculus]
Length = 520
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 118/493 (23%), Positives = 176/493 (35%), Gaps = 131/493 (26%)
Query: 104 DCPYLDTVNRQVLDFDFEKF---------CSVSLSNLNVYACLVCGKYYQGRGQKSHAYT 154
+CP+L + + D KF CSV SN + + CL C + GR HA
Sbjct: 2 ECPHLSS--SVCIAPDSAKFPNGSPSSWCCSVCRSNKSPWVCLTCSSVHCGRYVNGHAKK 59
Query: 155 HSLEAG----------------HHVYINLRTEKVYCL-PDGYEINDPSLEDIRHV----- 192
H +A H V ++ + YC D + +ND L ++ V
Sbjct: 60 HYEDAQIPLTNHKKSEKQEKIQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQ 119
Query: 193 ----------------------------------------GLNNIKETDFVNVTIQSLMR 212
GL N+ T F+N +QSL
Sbjct: 120 NLENSAYTADRHRKRKLLENSSLNSKLLKVNGSTAAICATGLRNLGNTCFMNAILQSLSN 179
Query: 213 V------------TPLRNFFLIPENYRHCKS------PLVHRFGDLTRKIWHARNFKGQV 254
+ LRN H +S LV F +W +
Sbjct: 180 IEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDTSVSLVEEFRKTLCALWQGS--QTAF 237
Query: 255 SPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR---NTKKNTSIIYE----- 306
SP + K FR Q + EFM +LL+ LH +L+ N ++++ E
Sbjct: 238 SPESLFYVIWKI-MPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAVLQENSTLS 296
Query: 307 -----CFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-PFLMLGLDLP 360
C G VV I G QN G TE+ + PFL L LD+P
Sbjct: 297 ASSKCCVNGASTVVTAI----FGGILQNEVNCLICG-------TESRKFDPFLDLSLDIP 345
Query: 361 PPPLFKDVMEKNIIPQVPLFNILKKF-DGETV--TEVVRPHVARMR------YRVTRLPK 411
K + P L + L+ F D E + TE+ H + + + + +LPK
Sbjct: 346 SQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPK 405
Query: 412 YMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHD 471
+ LH++RF + K T V FP++ L++K Y L P+ ++ YDL A +VH
Sbjct: 406 VLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY--LLEPENSDPENCLYDLAAVVVHH 463
Query: 472 GKPEG-GFYRVFV 483
G G G Y +
Sbjct: 464 GSGVGSGHYTAYA 476
>gi|395822293|ref|XP_003784455.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2
[Otolemur garnettii]
Length = 476
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 160/423 (37%), Gaps = 82/423 (19%)
Query: 124 CSVSLSNLNVYACLVCGKYYQGR---------------GQKSHAYTHSLEAGHHVYINLR 168
CSV SN + + CL C + G QK + +LE + R
Sbjct: 29 CSVCRSNKSPWVCLTCSSVHCGSYRCDDFVVNDTKLGLVQKVREHLQNLENSAFIADRHR 88
Query: 169 TEKVYCLPDGYEIN------DPSLEDIRHVGLNNIKETDFVNVTIQSLMRV--------- 213
K L + +N + S I GL N+ T F+N +QSL +
Sbjct: 89 KRK---LVENSSLNSKLLKVNGSTAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKE 145
Query: 214 ---TPLRNFFLIPENYRHCKS------PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVM 264
LRN H +S LV F +W + SP V
Sbjct: 146 LPAVELRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGS--QTAFSPESLFYVVW 203
Query: 265 KASKKRFRIGVQSNPVEFMSWLLNTLHSDLR---NTKKNTSIIYE----------CFQGE 311
K FR Q + EFM +LL+ LH +L+ N +++I+ E C G
Sbjct: 204 KI-MPNFRGYQQQDAHEFMRYLLDHLHLELQDGFNGVSHSAILQENSTLSTSNKCCINGS 262
Query: 312 LEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVME 370
VV I G QN G TE+ + PFL L LD+P K
Sbjct: 263 STVVTAI----FGGILQNEVNCLICG-------TESRKFDPFLDLSLDIPSQFRSKRSKN 311
Query: 371 KNIIPQVPLFNILKKF-DGETV--TEVVRPHVARMR------YRVTRLPKYMILHMRRFT 421
+ P L + L+ F D E + TE+ H + + + + +LPK + LH++RF
Sbjct: 312 QENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFH 371
Query: 422 KNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYR 480
+ K T V FP++ L++K Y L P+ + YDL A +VH G G G Y
Sbjct: 372 WTAYLRNKVDTYVEFPLRGLDMKCY--LLEPENSGPENCLYDLAAVVVHHGSGVGSGHYT 429
Query: 481 VFV 483
+
Sbjct: 430 AYA 432
>gi|432863250|ref|XP_004070044.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Oryzias
latipes]
Length = 508
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 134/349 (38%), Gaps = 59/349 (16%)
Query: 177 DGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFF------------LIPE 224
DG + D + GL N+ T F+N +QSL + +F
Sbjct: 69 DGKLLKDGENVALGATGLRNLGNTCFMNAILQSLSNIEQFSCYFKELPAVALRSGKTAGR 128
Query: 225 NYRHCKS------PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSN 278
H +S LV F +W + SP A+ K FR Q +
Sbjct: 129 RMYHTRSQGDNSVSLVEEFRKTLCSLWQGN--QTAFSPDSLFYAIWKIMPS-FRGYQQQD 185
Query: 279 PVEFMSWLLNTLHSDLRNTKKNTSIIYE--------------CFQGELEVVKEIPKNTIS 324
EFM +LL+ LH +L+ ++ S C G VV I
Sbjct: 186 AHEFMRYLLDHLHRELQYSRNGASHPVSPQDGVRLSSAEGKCCTNGAPSVVTSI----FG 241
Query: 325 GNDQNTEKGSDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNIL 383
G QN G TE+ + PFL L LD+P K ++ P L + L
Sbjct: 242 GLLQNEVNCLICG-------TESRKFDPFLDLSLDIPSQFRQKRSKDQEPSPTCTLRDCL 294
Query: 384 KKF-DGETV--TEVVRPHVARMRYRVTR------LPKYMILHMRRFTKNNFFVEKNPTLV 434
F D E + TE+ H + R + T+ LPK + LH++RF F K T V
Sbjct: 295 YSFTDLEELDETELYYCHKCKKRQKSTKKFWIHNLPKVLCLHLKRFHWTAFLRNKIDTYV 354
Query: 435 NFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVF 482
FP+K L+++ Y L P+ + YDL+A +VH G G G Y +
Sbjct: 355 EFPLKGLDMRGY--LLEPENSLPGSCLYDLVAVVVHHGSGVGSGHYTAY 401
>gi|145545853|ref|XP_001458610.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426431|emb|CAK91213.1| unnamed protein product [Paramecium tetraurelia]
Length = 503
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 139/343 (40%), Gaps = 78/343 (22%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLI--------PENYRHCKSPLVHRFGDLTRKI 244
GL N+ T F+N +IQ+L PL ++F+ PEN + +V F L R +
Sbjct: 69 GLTNLGNTCFLNSSIQALSNTQPLTDYFMSQLHIKEINPENPLSSQGNIVKSFAQLIRLL 128
Query: 245 W-----HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK 299
W + + + P +F+ V + F G Q + EF+++LL+ +H DL KK
Sbjct: 129 WQKVDQYQYDDMKVLKPTQFISTVGNYN-PIFAEGTQEDAHEFIAFLLDMIHEDLNRIKK 187
Query: 300 ----------------------------NTSIIYECFQGELEVVKEIPKNTISGNDQNTE 331
N SII + FQG++
Sbjct: 188 KPYVEQAKFTKFPTNEDADAEWKKYLSRNQSIIVDLFQGQM------------------- 228
Query: 332 KGSDGGDDHDNITTETSRM---PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDG 388
D +T ++SR PF+ L + P L ++ + I + LK +G
Sbjct: 229 -----LDTLSCLTCKSSRYCFEPFMYLSV----PVLNRECELQECIEEFLKKETLKGDEG 279
Query: 389 ETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIP 448
T + + + + +P +I+H++RF N+ F K +LV +P++NL ++
Sbjct: 280 WNCTNCNQRRDSNKKIDLWSMPNILIIHLKRFKFNSQFRAKIRSLVKYPLQNLSFEN--- 336
Query: 449 LPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
L K+ EK YDL A I H G G Y + + + + W
Sbjct: 337 LVCTKQVEK--PTYDLYAVINHSGTLTSGHYTAYGKNRDDLHW 377
>gi|307193102|gb|EFN76019.1| Ubiquitin carboxyl-terminal hydrolase 8 [Harpegnathos saltator]
Length = 991
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 126/312 (40%), Gaps = 26/312 (8%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFF--------LIPENYRHCKSPLVHRFGDLTRK 243
GL N+ + ++N IQ L T L +F L N + +V + +
Sbjct: 658 TGLKNLGNSCYMNSIIQCLSNTTHLAKYFTDNSYADDLNTNNDNMTQGQVVEEVAQVIKA 717
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R +SPH+ L+ + K +F Q + EF+++LL+ +H+DL KK + +
Sbjct: 718 LW--RGQYKSISPHD-LKVAVGQYKLQFESYDQQDSHEFLTFLLDWMHNDL---KKESKM 771
Query: 304 IYECFQGELEVVKEI--PKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPP 361
E E E K + K+ IS + + +T L + L
Sbjct: 772 PIEMTNAEKEWDKAMNSQKSIISDLFFGQLRSTITCSFCKQASTTYETFNSLTMSLSHSN 831
Query: 362 PPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFT 421
D MEK + Q K G + P A ++ +L +++H+ RF
Sbjct: 832 RCTLNDCMEKFVTGQ--------KVIGWKCPKCQTPRDATKKFDFVKLAPIVVIHLNRFA 883
Query: 422 KNNFFVEKNPTLVNFPVKNLELKDYIPL--PTPKENEKLRSKYDLIANIVHDGKPEGGFY 479
++ ++EK T V+FP+ LK Y+ PT N Y L A H G EGG Y
Sbjct: 884 ESGGWLEKRNTAVDFPLTGFNLKPYLVSENPTAMSNNIRNYNYTLYAMSNHYGTMEGGHY 943
Query: 480 RVFVQRKSEELW 491
F + ++ W
Sbjct: 944 TAFCKNATQNKW 955
>gi|389739172|gb|EIM80366.1| hypothetical protein STEHIDRAFT_172638 [Stereum hirsutum FP-91666
SS1]
Length = 1408
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 136/343 (39%), Gaps = 56/343 (16%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRKI 244
GL N+ T ++N T+Q L P FF N K + F + +I
Sbjct: 1049 GLRNLGNTCYMNATMQCLSATVPFARFFTEGRWRAAVNMMNKMGTKGAIAQAFAHILHEI 1108
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSI 303
W SP F +++ + + F Q + EF+SWLL+ LH DL R K+T
Sbjct: 1109 WQGE--MSFFSPISFRRSICSYASQ-FAGSEQHDSQEFLSWLLDALHEDLNRVISKSTYE 1165
Query: 304 IYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNIT------------------- 344
+ + ELE ++P+ S + + + D+I
Sbjct: 1166 VTPEREAELE---KLPQQIASEQEWRIYRMRN-----DSIVVDFFQGQFRNRMECMTCHK 1217
Query: 345 TETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRY 404
T T+ F+ L L +P K ++ N + +++K D A +
Sbjct: 1218 TSTTYNSFMNLSLPVPTSKHGKITLQ-NCLDAFVKEEVMEKSDAWNCPNCKVLRKATKQL 1276
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRS---- 460
++RLP +++ +RF+ F +K V+FP+K LEL +Y+P P P ++ ++
Sbjct: 1277 SLSRLPPVLLIQFKRFSFKGPFTDKIDKHVDFPLKGLELTNYMPPPLPPGVDRGQAAVQY 1336
Query: 461 ------------KYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
KYDL A H G G Y F+ + + L+
Sbjct: 1337 GNDDPRQQTPPYKYDLYAVTNHFGSLSSGHYTAFINSRGQWLY 1379
>gi|67968614|dbj|BAE00666.1| unnamed protein product [Macaca fascicularis]
Length = 435
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 136/344 (39%), Gaps = 60/344 (17%)
Query: 183 DPSLEDIRHVGLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYRHCK 230
+ S I GL N+ T F+N +QSL + LRN H +
Sbjct: 65 NGSTTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR 124
Query: 231 S------PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMS 284
S LV F +W + SP V K FR Q + EFM
Sbjct: 125 SQGDNNVSLVEEFRKTLCALWQGS--QTAFSPESLFYVVWKI-MPNFRGYQQQDAHEFMR 181
Query: 285 WLLNTLHSDLR---NTKKNTSIIYE----------CFQGELEVVKEIPKNTISGNDQNTE 331
+LL+ LH +L+ N ++I+ E C G VV I G QN
Sbjct: 182 YLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAI----FGGILQNEV 237
Query: 332 KGSDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF-DGE 389
G TE+ + PFL L LD+P K + P L + L+ F D E
Sbjct: 238 NCLICG-------TESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLE 290
Query: 390 TV--TEVVRPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNL 441
+ TE+ H + + + + +LPK + LH++RF + K T V FP++ L
Sbjct: 291 ELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGL 350
Query: 442 ELKDYIPLPTPKENEKLRSK-YDLIANIVHDGKPEG-GFYRVFV 483
++K Y+ P EN L S YDL A +VH G G G Y +
Sbjct: 351 DMKCYLLEP---ENSGLESCLYDLAAVVVHHGSGVGSGHYTAYA 391
>gi|405972649|gb|EKC37407.1| Ubiquitin carboxyl-terminal hydrolase 3 [Crassostrea gigas]
Length = 479
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 105/448 (23%), Positives = 164/448 (36%), Gaps = 117/448 (26%)
Query: 134 YACLVCGKYYQGRGQKSHAYTHSLEAGHH-VYINLRTEKVYCLP-DGYEINDPS---LED 188
+ C+ CG+ + GR HA H EA +H V ++ V+C D + IND + LE
Sbjct: 12 WICVKCGRIHCGRYVNGHAKLHHEEATNHAVCMDCDNLAVFCYKCDEFVINDTAPGHLEK 71
Query: 189 IRH---------------------------------------------VGLNNIKETDFV 203
+R GL N+ T F+
Sbjct: 72 LRQQLKSISSAQARMRQKSRRRCSTDSQENEKATKKIKKDDRLSKPRSSGLRNLGNTCFM 131
Query: 204 NVTIQSLMRVTPLRNFF-LIPE-----------NYRHCKSP-----LVHRFGDLTRKIWH 246
N +QSL + + +P R K+P LV +W
Sbjct: 132 NAVLQSLSNIQQFCGYIKQLPSLEEKVTKVKKIQTRKSKTPEEDVLLVEELRKTLCALWQ 191
Query: 247 ARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT--------- 297
KG +SP E L AV+ RFR Q + EFM +LL+ LH++L
Sbjct: 192 GS--KGAISP-ESLFAVIWKVVPRFRGYQQQDAHEFMRYLLDRLHTELLTLLPYPNSDSP 248
Query: 298 ----KKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFL 353
K ++I+ F G L+ N+ HD PFL
Sbjct: 249 FIGPKGKSTIVTAIFGGLLQ------------NEVTCLVCGVESKKHD---------PFL 287
Query: 354 MLGLDLPPPPLFKDVMEKNIIP-QVPLFNILKKFDGE---------TVTEVVRPHVARMR 403
L LD+P + V K+ + L + L+ F + + + +
Sbjct: 288 DLSLDIPQQFCTRGVKAKDGEQLRCTLSDCLQSFTELEELEESELYMCSTCKKKQRSTKK 347
Query: 404 YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIP--LPTPKENEKLRSK 461
+ + RLP + LH++RF +FF K T V FP++ L + YI L + + ++
Sbjct: 348 FWIRRLPNVLCLHIKRFRWQSFFRVKLETFVEFPLEGLNMHKYILDNLHETRGSGSGSNE 407
Query: 462 YDLIANIVHDGKPEG-GFYRVFVQRKSE 488
YDL A +VH G G G Y + + + +
Sbjct: 408 YDLAAVVVHHGSGAGSGHYTSYARHEGQ 435
>gi|328863265|gb|EGG12365.1| ubiquitin-specific protease [Melampsora larici-populina 98AG31]
Length = 1194
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 121/292 (41%), Gaps = 32/292 (10%)
Query: 185 SLED--IRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHC---------KSPL 233
S ED + GL N+ T ++N T+Q + PL FF +Y+ C K L
Sbjct: 859 SFEDGQVGMTGLKNLGNTCYMNSTLQCISATIPLARFFKD-GSYKRCINRVNPLGTKGAL 917
Query: 234 VHRFGDLTRKIWHAR-NFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHS 292
+L R +W A+ F VSP F +A+ + + + FR Q + EF+ +LL+ LH
Sbjct: 918 AETVAELVRMMWSAQYTF---VSPTIFREAICRFAPQ-FRGSDQHDAQEFLGFLLDGLHE 973
Query: 293 DLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDG--------GDDHDNI- 343
DL + I E E+ + +P S + K D G +
Sbjct: 974 DLNLVTHKPAPIEMSSAREAEL-EALPTQLASAREWEIYKRRDNSVIVELFQGQYRSRLQ 1032
Query: 344 -----TTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPH 398
TT T+ F+ L L +P V + I++K D +
Sbjct: 1033 CLTCGTTSTTYNTFMYLSLPIPTGRGMSKVSLTQCLDAFLKEEIMEKDDAWNCPKCKTRR 1092
Query: 399 VARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLP 450
A R + RLP +++H++RF+ F +K V +P+ L+L +YIP P
Sbjct: 1093 KATKRLSIARLPPILLIHLKRFSFKGPFSDKLEAFVQYPLYGLDLTNYIPAP 1144
>gi|126277020|ref|XP_001366252.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Monodelphis
domestica]
Length = 520
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 116/466 (24%), Positives = 166/466 (35%), Gaps = 124/466 (26%)
Query: 124 CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAG----------------HHVYINL 167
CSV SN + + CL C + GR HA H +A H V ++
Sbjct: 29 CSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQISLTNHKKTEKQEKVQHTVCMDC 88
Query: 168 RTEKVYCL-PDGYEINDPSLEDIRHV---------------------------------- 192
+ YC D + +ND L ++ V
Sbjct: 89 SSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHRKRKLLENSSLNSKLLK 148
Query: 193 -----------GLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYRHC 229
GL N+ T F+N +QSL + LRN H
Sbjct: 149 VNGSTTALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYHT 208
Query: 230 KS------PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFM 283
+S LV F +W + SP V K FR Q + EFM
Sbjct: 209 RSQGDNNVSLVEEFRKTLCALWQGS--QTAFSPESLFYVVWKI-MPNFRGYQQQDAHEFM 265
Query: 284 SWLLNTLHSDLR---NTKKNTSIIYE----------CFQGELEVVKEIPKNTISGNDQNT 330
+LL+ LH +L+ N + I+ E C G VV I G QN
Sbjct: 266 RYLLDHLHLELQGGFNGVSRSVILQENSSLSASNKCCINGASTVVTAI----FGGILQNE 321
Query: 331 EKGSDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNI--IPQVPLFNILKKF- 386
G TE+ + PFL L LD+P F++ KN P L + L+ F
Sbjct: 322 VNCLICG-------TESRKFDPFLDLSLDIPSQ--FRNKRSKNQENGPLCSLRDCLRSFT 372
Query: 387 DGETV--TEVVRPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPV 438
D E + TE+ H + + + + +LPK + LH++RF + K T V FP+
Sbjct: 373 DLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPL 432
Query: 439 KNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
+ L++K Y+ P E YDL A +VH G G G Y +
Sbjct: 433 RGLDMKCYLLEPENSGPESCL--YDLAAVVVHHGSGVGSGHYTAYA 476
>gi|431895934|gb|ELK05352.1| Ubiquitin carboxyl-terminal hydrolase 3 [Pteropus alecto]
Length = 520
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 115/466 (24%), Positives = 167/466 (35%), Gaps = 124/466 (26%)
Query: 124 CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAG----------------HHVYINL 167
CSV SN + + CL C + GR HA H +A H V ++
Sbjct: 29 CSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQVPLTNHKKSEKQDKAQHTVCMDC 88
Query: 168 RTEKVYCL-PDGYEINDPSLEDIRHV---------------------------------- 192
+ YC D + +ND L ++ V
Sbjct: 89 SSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHRKRKLLENSSLNSKLLK 148
Query: 193 -----------GLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYRHC 229
GL N+ T F+N +QSL + LRN H
Sbjct: 149 VNGSTTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHT 208
Query: 230 KS------PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFM 283
+S LV F +W + SP V K FR Q + EFM
Sbjct: 209 RSQGDNNVSLVEEFRKTLCALWQGS--QTAFSPESLFYVVWKI-MPNFRGYQQQDAHEFM 265
Query: 284 SWLLNTLHSDLR---NTKKNTSIIYE----------CFQGELEVVKEIPKNTISGNDQNT 330
+LL+ LH +L+ N ++I+ E C G VV I G QN
Sbjct: 266 RYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAI----FGGFLQNE 321
Query: 331 EKGSDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNI--IPQVPLFNILKKF- 386
G TE+ + PFL L LD+P F++ KN P L + L+ F
Sbjct: 322 VNCLICG-------TESRKFDPFLDLSLDIPSQ--FRNKRSKNQENGPVCSLRDCLRSFT 372
Query: 387 DGETV--TEVVRPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPV 438
D E + TE+ H + + + + +LPK + LH++RF + K V FP+
Sbjct: 373 DLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDIYVEFPL 432
Query: 439 KNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
+ L++K Y L P+ + YDL A +VH G G G Y +
Sbjct: 433 RGLDMKCY--LLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYA 476
>gi|426233172|ref|XP_004010591.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Ovis
aries]
Length = 476
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 161/425 (37%), Gaps = 86/425 (20%)
Query: 124 CSVSLSNLNVYACLVCGKYYQGR---------------GQKSHAYTHSLEAGHHVYINLR 168
CSV SN + + CL C + G QK + +LE R
Sbjct: 29 CSVCRSNKSPWVCLTCSSVHCGSYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHR 88
Query: 169 TEKVYCLPDGYEIN------DPSLEDIRHVGLNNIKETDFVNVTIQSLMRV--------- 213
K L + +N + S + GL N+ T F+N +QSL +
Sbjct: 89 KRK---LLENSSLNSKLLKVNGSTTAVCATGLRNLGNTCFMNAILQSLSNIEQFCCYFKE 145
Query: 214 ---TPLRNFFLIPENYRHCKS------PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVM 264
LRN H +S LV F +W + SP V
Sbjct: 146 LPAVELRNGKTAGRRTYHTRSQGDSNVSLVEEFRKTLCALWQGS--QTAFSPESLFYVVW 203
Query: 265 KASKKRFRIGVQSNPVEFMSWLLNTLHSDLR---NTKKNTSIIYE----------CFQGE 311
K FR Q + EFM +LL+ LH +L+ N +SI+ E C G
Sbjct: 204 KI-MPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGISRSSILQENSTLSASNKCCINGA 262
Query: 312 LEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVME 370
VV I G QN G TE+ + PFL L LD+P F++
Sbjct: 263 STVVTAI----FGGILQNEVNCLICG-------TESRKFDPFLDLSLDIPSQ--FRNKRS 309
Query: 371 KNI--IPQVPLFNILKKF-DGETV--TEVVRPHVARMR------YRVTRLPKYMILHMRR 419
KN P L + L+ F D E + TE+ H + + + + +LPK + LH++R
Sbjct: 310 KNQENGPTCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKR 369
Query: 420 FTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GF 478
F + K T V FP++ L++K Y L P+ + YDL A +VH G G G
Sbjct: 370 FHWTAYLRNKVDTYVEFPLRGLDMKCY--LLEPENSGPENCLYDLAAVVVHHGSGVGSGH 427
Query: 479 YRVFV 483
Y +
Sbjct: 428 YTAYA 432
>gi|70794797|ref|NP_001020595.1| ubiquitin carboxyl-terminal hydrolase 3 [Rattus norvegicus]
gi|68480670|gb|AAY97907.1| ubiquitin specific protease 3 [Rattus norvegicus]
Length = 520
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 111/466 (23%), Positives = 167/466 (35%), Gaps = 124/466 (26%)
Query: 124 CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTH----------------SLEAGHHVYINL 167
CSV SN + + CL C GR HA H +A H V ++
Sbjct: 29 CSVCRSNKSPWVCLTCSSVLCGRYVNGHAKKHYEDAQIPLLNHKRSEKQEKAQHTVCMDC 88
Query: 168 RTEKVYCL-PDGYEINDPSLEDIRHV---------------------------------- 192
+ YC D + +ND L ++ V
Sbjct: 89 SSYSTYCYRCDDFVVNDTKLGLVQKVREHLQSLENSAFTADRHRKRKLLENSSLNSKLLK 148
Query: 193 -----------GLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYRHC 229
GL N+ T F+N +QSL + LRN H
Sbjct: 149 VNGSTAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHT 208
Query: 230 KS------PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFM 283
+S LV F +W + SP V K FR Q + EFM
Sbjct: 209 RSQGDSNVSLVEEFRKTLCALWQGS--QTAFSPESLFYVVWKI-MPNFRGYRQQDAHEFM 265
Query: 284 SWLLNTLHSDLR---NTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSD----- 335
+LL+ LH +L+ N ++I+ E +T+S N++ G+
Sbjct: 266 RYLLDHLHLELQGGFNGVSRSAILQE-------------NSTLSANNKCCINGASTVVTT 312
Query: 336 --GGDDHDNIT-----TETSRM-PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF- 386
GG + + TE+ + PFL L LD+P K + P L + L+ F
Sbjct: 313 IFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFT 372
Query: 387 DGETV--TEVVRPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPV 438
D E + TE+ H + + + + +LPK + LH++RF + K T V FP+
Sbjct: 373 DLEELDETELYMCHKCKKKQKSTKKFWIQKLPKALCLHLKRFHWTAYLRNKVDTYVQFPL 432
Query: 439 KNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
+ L++K Y L P+ + YDL A VH G G G Y +
Sbjct: 433 RGLDMKCY--LLEPENSGPDSCLYDLAAVFVHHGSGVGSGHYTAYA 476
>gi|440907019|gb|ELR57212.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Bos grunniens
mutus]
Length = 492
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 116/465 (24%), Positives = 167/465 (35%), Gaps = 124/465 (26%)
Query: 125 SVSLSNLNVYACLVCGKYYQGRGQKSHAYTH----------------SLEAGHHVYINLR 168
SV SN + + CL C + GR HA H +A H V ++
Sbjct: 2 SVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQIPLTNHKKSEKQEKAQHTVCMDCS 61
Query: 169 TEKVYCL-PDGYEINDPSLEDIRHV----------------------------------- 192
+ YC D + +ND L ++ V
Sbjct: 62 SYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHRKRKLLENSSLNSKLLKV 121
Query: 193 ----------GLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYRHCK 230
GL N+ T F+N +QSL + LRN H +
Sbjct: 122 NGSTTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR 181
Query: 231 S------PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMS 284
S LV F +W + SP V K FR Q + EFM
Sbjct: 182 SQGENNVSLVEEFRKTLCALWQGS--QTAFSPESLFYVVWKI-MPNFRGYQQQDAHEFMR 238
Query: 285 WLLNTLHSDLR---NTKKNTSIIYE----------CFQGELEVVKEIPKNTISGNDQNTE 331
+LL+ LH +L+ N +SI+ E C G VV I G QN
Sbjct: 239 YLLDHLHLELQGGFNGISRSSILQENSTLSASNKCCINGASTVVTAI----FGGILQNEV 294
Query: 332 KGSDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNI--IPQVPLFNILKKF-D 387
G TE+ + PFL L LD+P F++ KN P L + L+ F D
Sbjct: 295 NCLICG-------TESRKFDPFLDLSLDIPSQ--FRNKRSKNQENGPTCSLRDCLRSFTD 345
Query: 388 GETV--TEVVRPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVK 439
E + TE+ H + + + + +LPK + LH++RF + K T V FP++
Sbjct: 346 LEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLR 405
Query: 440 NLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
L++K Y L P+ + YDL A +VH G G G Y +
Sbjct: 406 GLDMKCY--LLEPENSGPENCLYDLAAVVVHHGSGVGSGHYTAYA 448
>gi|440797226|gb|ELR18321.1| Ubiquitin carboxylterminal hydrolase [Acanthamoeba castellanii str.
Neff]
Length = 926
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 108/468 (23%), Positives = 170/468 (36%), Gaps = 120/468 (25%)
Query: 121 EKFCSVSLSNLNVYACLV--CGKYYQGRGQKSHAYTH-------SLEAGHHVYINLRTEK 171
E CS L +L +ACL C GR Q H H ++ H V INLRT+
Sbjct: 37 ETQCSHGLPHL--WACLGANCTFIGCGRDQNKHLMAHYNLAKKRNMGEEHCVCINLRTKM 94
Query: 172 VYCLPDGYEINDPSLEDIRHV-------------------------GLNNIKETDFVNVT 206
V+C E+ L + + GL N+ T + N
Sbjct: 95 VWCYACDEEVIVEQLREALAIPVASPVPASRPATALSTSTHTRGACGLANLGNTCYANAA 154
Query: 207 IQSLMRVTPLRNFFLI----PENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQA 262
+Q L PLR +FL R SPLV F L +W R + P E L+
Sbjct: 155 MQCLSNCPPLRTYFLRYMARQVKGRKKTSPLVFHFTQLIYDMWGGR--YSSLRPGEVLRE 212
Query: 263 VMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNT 322
+ + + F Q + EFM LL+ LH D + EL ++ P ++
Sbjct: 213 IRRFNPM-FGGYAQQDSQEFMRCLLDRLHEDTKE--------------ELPRIESSPTSS 257
Query: 323 ISGNDQNTEKGS---DGGDDHDNITTET------SRMPFLMLG---------LDL----- 359
S + EK + G D N E+ SR+ L G DL
Sbjct: 258 GSADSGEKEKETKPPQGHDSDSNGVVESTPGYLLSRIKCLKCGKVSPTKDAFYDLSIPIP 317
Query: 360 -----------------------PPPPLFKDVMEKNIIPQ--VPLFNILKKFDGETVTEV 394
P P LF V ++ V L + L+ F T E+
Sbjct: 318 DDKMLDKVTKEIEAEGVLSNSKRPSPGLFSKVTNWLMLSNRTVTLEDCLQAFC--TKEEL 375
Query: 395 VRPHVARMRY-----------RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLEL 443
+ R + R+ + P+ + +H++RF +++F K +V FP+++L++
Sbjct: 376 MGADRYRCEHCKTLNDSQKFLRIAQPPELLCIHIKRFRHDSYFGGKLSDVVQFPLRDLDI 435
Query: 444 KDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+ + ++ KYDL++ + H G GG Y + + W
Sbjct: 436 SRFC--EQDADAPQVSMKYDLVSVVNHIGGISGGHYIAYALNDEDGKW 481
>gi|327286811|ref|XP_003228123.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Anolis
carolinensis]
Length = 533
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 139/349 (39%), Gaps = 63/349 (18%)
Query: 180 EINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYR 227
+IN + + GL N+ T F+N +QSL + LRN
Sbjct: 148 KINGSTAAALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTY 207
Query: 228 HCKS------PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVE 281
H +S LV F +W + SP V K FR Q + E
Sbjct: 208 HTRSQGDNGVSLVEEFRKTLCALWQGS--QAAFSPESLFYVVWKI-MPNFRGYQQQDAHE 264
Query: 282 FMSWLLNTLHSDLR---NTKKNTSIIYE-----------CFQGELEVVKEIPKNTISGND 327
FM +LL+ LH +L+ N +S++ + C G VV I G
Sbjct: 265 FMRYLLDHLHRELQGGFNGVSRSSVLLQENSGLSAGGRCCINGASTVVTAI----FGGIL 320
Query: 328 QNTEKGSDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNI--IPQVPLFNILK 384
QN G TE+ + PFL L LD+P F++ KN P L + L+
Sbjct: 321 QNEVNCLICG-------TESRKFDPFLDLSLDIPSQ--FRNKRSKNQENGPTCTLRDCLR 371
Query: 385 KF-DGETV--TEVVRPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVN 435
F D E + TE+ H + + + + +LPK + LH++RF + K T V
Sbjct: 372 SFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVE 431
Query: 436 FPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
FP++ L++K + L P+ + YDL A +VH G G G Y +
Sbjct: 432 FPLRGLDMKCF--LLEPENSRPENCLYDLAAVVVHHGSGVGSGHYTAYA 478
>gi|323333728|gb|EGA75120.1| Sad1p [Saccharomyces cerevisiae AWRI796]
Length = 346
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 125/282 (44%), Gaps = 49/282 (17%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
+G N D+ + + + + P+R+ FL+ N+ + + R +KIW + FK
Sbjct: 53 IGFTNAATYDYAHSVLLLISHMVPVRDHFLL--NHFDNQGEFIKRLSICVKKIWSPKLFK 110
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVE---FMSWLLNTLHSDLRNTKKNTSIIYECF 308
+S +FL S + R G+ NP++ F+ WL N + ++ + SI+
Sbjct: 111 HHLSVDDFL------SYLKVREGLNLNPIDPRLFLLWLFNKI---CLSSNELKSILNHSC 161
Query: 309 QGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDV 368
+G++++ K K S +++T + PF +L LDLP F+D
Sbjct: 162 KGKVKIAKVESKPEAS----------------ESVTGKVIVKPFWVLTLDLPEFSPFEDG 205
Query: 369 MEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVE 428
+ +PQ+ + +L KF + + +TRLP+++I H RF +N+
Sbjct: 206 NSVDDLPQINITKLLTKFTKSRSSS------TSTVFELTRLPQFLIFHFNRFDRNS---- 255
Query: 429 KNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVH 470
+ PVKN ++ + E E L KY L AN+VH
Sbjct: 256 ------DHPVKN---RNQTLVEFSSELEILHVKYRLKANVVH 288
>gi|345795043|ref|XP_865326.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Canis
lupus familiaris]
Length = 476
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 161/425 (37%), Gaps = 86/425 (20%)
Query: 124 CSVSLSNLNVYACLVCGKYYQGR---------------GQKSHAYTHSLEAGHHVYINLR 168
CSV SN + + CL C + G QK + +LE R
Sbjct: 29 CSVCRSNKSPWVCLTCSSVHCGSYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHR 88
Query: 169 TEKVYCLPDGYEIN------DPSLEDIRHVGLNNIKETDFVNVTIQSLMRV--------- 213
K L + +N + S I GL N+ T F+N +QSL +
Sbjct: 89 KRK---LLENSSLNSKLLKVNGSTAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKE 145
Query: 214 ---TPLRNFFLIPENYRHCKS------PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVM 264
LRN H +S LV F +W + SP V
Sbjct: 146 LPAVELRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGS--QTAFSPESLFYVVW 203
Query: 265 KASKKRFRIGVQSNPVEFMSWLLNTLHSDLR---NTKKNTSIIYE----------CFQGE 311
K FR Q + EFM +LL+ LH +L+ N ++I+ E C G
Sbjct: 204 KI-MPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGA 262
Query: 312 LEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVME 370
VV I G QN G TE+ + PFL L LD+P F++
Sbjct: 263 STVVTAI----FGGILQNEVNCLICG-------TESRKFDPFLDLSLDIPSQ--FRNKRS 309
Query: 371 KNI--IPQVPLFNILKKF-DGETV--TEVVRPHVARMR------YRVTRLPKYMILHMRR 419
KN P L + L+ F D E + TE+ H + + + + +LPK + LH++R
Sbjct: 310 KNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKR 369
Query: 420 FTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GF 478
F + K T V FP++ L++K Y L P+ + YDL A +VH G G G
Sbjct: 370 FHWTAYLRNKVDTYVEFPLRGLDMKCY--LLEPENSGPEHCLYDLAAVVVHHGSGVGSGH 427
Query: 479 YRVFV 483
Y +
Sbjct: 428 YTAYA 432
>gi|297696819|ref|XP_002825577.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Pongo
abelii]
gi|332235885|ref|XP_003267135.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 3
[Nomascus leucogenys]
Length = 476
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 158/423 (37%), Gaps = 82/423 (19%)
Query: 124 CSVSLSNLNVYACLVCGKYYQGR---------------GQKSHAYTHSLEAGHHVYINLR 168
CSV SN + + CL C + G QK + +LE R
Sbjct: 29 CSVCRSNKSPWVCLTCSSVHCGSYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHR 88
Query: 169 TEKVYCLPDGYEINDPSLE------DIRHVGLNNIKETDFVNVTIQSLMRV--------- 213
K L + +N L+ I GL N+ T F+N +QSL +
Sbjct: 89 KRK---LLENSTLNSKLLKVNGSTTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKE 145
Query: 214 ---TPLRNFFLIPENYRHCKS------PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVM 264
LRN H +S LV F +W + SP V
Sbjct: 146 LPAVELRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGS--QTAFSPESLFYVVW 203
Query: 265 KASKKRFRIGVQSNPVEFMSWLLNTLHSDLR---NTKKNTSIIYE----------CFQGE 311
K FR Q + EFM +LL+ LH +L+ N ++I+ E C G
Sbjct: 204 KI-MPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGA 262
Query: 312 LEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVME 370
VV I G QN G TE+ + PFL L LD+P K
Sbjct: 263 STVVTAI----FGGILQNEVNCLICG-------TESRKFDPFLDLSLDIPSQFRSKRSKN 311
Query: 371 KNIIPQVPLFNILKKF-DGETV--TEVVRPHVARMR------YRVTRLPKYMILHMRRFT 421
+ P L + L+ F D E + TE+ H + + + + +LPK + LH++RF
Sbjct: 312 QENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFH 371
Query: 422 KNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYR 480
+ K T V FP++ L++K Y L P+ + YDL A +VH G G G Y
Sbjct: 372 WTAYLRNKVDTYVEFPLRGLDMKCY--LLEPENSGPESCLYDLAAVVVHHGSGVGSGHYT 429
Query: 481 VFV 483
+
Sbjct: 430 AYA 432
>gi|145551979|ref|XP_001461666.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429501|emb|CAK94293.1| unnamed protein product [Paramecium tetraurelia]
Length = 484
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 137/344 (39%), Gaps = 78/344 (22%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI--------PENYRHCKSPLVHRFGDLTRK 243
+GL N+ T F+N +IQ+L PL ++F+ P+N + +V F L R
Sbjct: 49 LGLTNLGNTCFLNSSIQALSNTQPLTDYFMSQLHVKEINPDNPLSSQGNIVQSFAQLIRL 108
Query: 244 IW-----HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK 298
+W + + P +F+ + + F G Q + EF+++LL+ +H DL K
Sbjct: 109 LWQKVDQYTLEEIQALKPTQFISTIGNYNPI-FAEGTQEDAHEFIAFLLDMIHEDLNRIK 167
Query: 299 K----------------------------NTSIIYECFQGELEVVKEIPKNTISGNDQNT 330
K N SII + FQG +
Sbjct: 168 KKPYVEQTKFTKLPTNDDAHQEWTKYLSRNQSIIVDLFQGHM------------------ 209
Query: 331 EKGSDGGDDHDNITTETSRM---PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD 387
D +T ++SR PF+ L + P L ++ I + L +
Sbjct: 210 ------LDTLSCLTCKSSRYCFEPFMYLSV----PVLSRECDLLECIEEFLKTETLTGDE 259
Query: 388 GETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYI 447
G T+ + + + + +P +I+H++RF N+ F K +LV +P++NL ++
Sbjct: 260 GWNCTKCSQRRDSNKKIDLWSMPNILIIHLKRFKFNSQFRAKIRSLVRYPLQNLSFEN-- 317
Query: 448 PLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
L K+ EK YDL A I H G G Y + + + + W
Sbjct: 318 -LVCTKQIEK--PTYDLYAVINHSGTLTSGHYTAYAKNRDDLQW 358
>gi|449472093|ref|XP_002191422.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Taeniopygia
guttata]
Length = 640
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 130/334 (38%), Gaps = 58/334 (17%)
Query: 192 VGLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYRHCKS------PL 233
GL N+ T F+N +QSL + LRN H +S L
Sbjct: 279 TGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSL 338
Query: 234 VHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSD 293
V F +W + SP V K FR Q + EFM +LL+ LH +
Sbjct: 339 VEEFRKTLCALWQGN--QTAFSPESLFYVVWKIMPN-FRGYQQQDAHEFMRYLLDHLHLE 395
Query: 294 LR---NTKKNTSIIYE----------CFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDH 340
L+ N + I+ E C G VV I G QN G
Sbjct: 396 LQGGFNGVSRSVILQENSSLSASNKCCINGASTVVTAI----FGGILQNEVNCLICG--- 448
Query: 341 DNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF-DGETV--TEVVR 396
TE+ + PFL L LD+P K + P L + L+ F D E + TE+
Sbjct: 449 ----TESRKFDPFLDLSLDIPSQFRNKRTKNQESGPMCTLRDCLRSFTDLEELDETELYM 504
Query: 397 PHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLP 450
H + + + + +LPK + LH++RF + K T V FP++ L++K Y+ P
Sbjct: 505 CHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEP 564
Query: 451 TPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
E YDL+A +VH G G G Y +
Sbjct: 565 ENSGPESCL--YDLVAVVVHHGSGVGSGHYTAYA 596
>gi|47228612|emb|CAG07344.1| unnamed protein product [Tetraodon nigroviridis]
Length = 313
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 118/275 (42%), Gaps = 21/275 (7%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP----ENYRHCKSPLVHRFGDLTRKIWHA 247
+GL NI T F+N +Q L LR++ L+ E + + + L F + +W
Sbjct: 3 IGLRNIGNTCFLNAIVQCLSHTRGLRDYCLLKRYRQEKFANQDAKLTEAFSQVLTGLWDE 62
Query: 248 RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL------RNTKKNT 301
+ ++P + L +V K + F Q + EF+ +LL+ LH ++ R K
Sbjct: 63 NEVESAINPRQ-LYSVFKEAVPYFSGYSQQDAQEFLRFLLDKLHVEINRRPYVRRPVKEH 121
Query: 302 SIIYECFQGELEVVKEIPKNTISGNDQNTE--KGSDGGDDHDNITTETSRMPFLMLGLDL 359
IY F+ E K+ + + + G H ++ + S + L L
Sbjct: 122 EQIYARFRISEEAAVMWKKHLERDDSRIVDLFSGQLRSSLHCSVCSHHSNTFDVFCDLSL 181
Query: 360 PPPPLF--KDVMEKNIIPQVPLFNILKKFDGE---TVTEVVRPHVARMRYRVTRLPKYMI 414
P P +DV K+ + LF+ +K D E R R + R P+ ++
Sbjct: 182 PIPKRSSGRDVTLKDCLD---LFSQEEKLDKENSPMCERCTRHTACTKRLSIQRFPQVIV 238
Query: 415 LHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPL 449
+H+ RFT + + + K+ V+FP+ NL+L Y P+
Sbjct: 239 IHLNRFTTSRWSISKSTVYVSFPLTNLDLGPYGPV 273
>gi|393214464|gb|EJC99956.1| cysteine proteinase [Fomitiporia mediterranea MF3/22]
Length = 1206
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 143/373 (38%), Gaps = 93/373 (24%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T ++N TIQ L P FF+ N K L F +
Sbjct: 825 AGLKNLGNTCYMNSTIQCLSATVPFARFFIDGRWKSAVNFLNPLGTKGHLTAAFASILHD 884
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + ++P F ++V ++ F Q + EF+++LL+ LH DL R K
Sbjct: 885 LWHQES--PTITPLAFRKSVCMYGQQ-FAGSEQHDSQEFLNFLLDGLHEDLNRILNKEPV 941
Query: 303 IIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGG-----------DDHDNIT---TETS 348
+ + ELE+ +P+ S + N + D + + +T T T+
Sbjct: 942 LRTPEREAELEL---LPQQIASQQEWNLYRMRDDSIVVDFFQGQFRNRMECLTCRKTSTT 998
Query: 349 RMPFLMLGLDLP----------------PPPLFKDVMEKNIIPQVPLFNILKKFDGETVT 392
F+ L L +P + ++VMEK Q P L+K
Sbjct: 999 YNSFMYLTLPIPMGGRGFGGKATLQQCLDAFVQEEVMEKADAWQCPNCKTLRK------- 1051
Query: 393 EVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTP 452
A + ++RLP +++H++RFT F +K T V+FP++ L+L +Y+P P P
Sbjct: 1052 -------ATKKLSISRLPPVLLIHLKRFTTKGHFTDKLETFVDFPLRGLDLTNYMPAPLP 1104
Query: 453 K--ENEKLRS--------------------------------KYDLIANIVHDGKPEGGF 478
+ KL S KYDL A H G G
Sbjct: 1105 PNVDRSKLYSSATGMLNGSAQVAGTTQTPISLDDPRSQVPPYKYDLYAVTNHFGTLSSGH 1164
Query: 479 YRVFVQRKSEELW 491
Y FV + L+
Sbjct: 1165 YTAFVNSRGNWLY 1177
>gi|380798287|gb|AFE71019.1| ubiquitin carboxyl-terminal hydrolase 3, partial [Macaca mulatta]
Length = 491
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 113/463 (24%), Positives = 163/463 (35%), Gaps = 120/463 (25%)
Query: 125 SVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAG----------------HHVYINLR 168
SV SN + + CL C + GR HA H +A H V ++
Sbjct: 1 SVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQVPLTNHKKSEKQDKAQHTVCMDCS 60
Query: 169 TEKVYCL-PDGYEINDPSLEDIRHV----------------------------------- 192
+ YC D + +ND L ++ V
Sbjct: 61 SYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHRKRKLLENSTLNSKLLKV 120
Query: 193 ----------GLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYRHCK 230
GL N+ T F+N +QSL + LRN H +
Sbjct: 121 NGSTTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR 180
Query: 231 S------PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMS 284
S LV F +W + SP V K FR Q + EFM
Sbjct: 181 SQGDNNVSLVEEFRKTLCALWQGS--QTAFSPESLFYVVWKI-MPNFRGYQQQDAHEFMR 237
Query: 285 WLLNTLHSDLR---NTKKNTSIIYE----------CFQGELEVVKEIPKNTISGNDQNTE 331
+LL+ LH +L+ N ++I+ E C G VV I G QN
Sbjct: 238 YLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAI----FGGILQNEV 293
Query: 332 KGSDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF-DGE 389
G TE+ + PFL L LD+P K + P L + L+ F D E
Sbjct: 294 NCLICG-------TESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLE 346
Query: 390 TV--TEVVRPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNL 441
+ TE+ H + + + + +LPK + LH++RF + K T V FP++ L
Sbjct: 347 ELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGL 406
Query: 442 ELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
++K Y+ P E YDL A +VH G G G Y +
Sbjct: 407 DMKCYLLEPENSGPESCL--YDLAAVVVHHGSGVGSGHYTAYA 447
>gi|354474362|ref|XP_003499400.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Cricetulus
griseus]
Length = 502
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 114/463 (24%), Positives = 163/463 (35%), Gaps = 120/463 (25%)
Query: 125 SVSLSNLNVYACLVCGKYYQGRGQKSHAYTH----------------SLEAGHHVYINLR 168
SV SN + + CL C + GR HA H +A H V ++
Sbjct: 12 SVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQIPLLNHKRSEKQEKAQHTVCMDCS 71
Query: 169 TEKVYCL-PDGYEINDPSLEDIRHV----------------------------------- 192
+ YC D + +ND L ++ V
Sbjct: 72 SYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHRKRKLLENSSLNSKLLKV 131
Query: 193 ----------GLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYRHCK 230
GL N+ T F+N +QSL + LRN H +
Sbjct: 132 NGSTTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR 191
Query: 231 S------PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMS 284
S LV F +W + SP V K FR Q + EFM
Sbjct: 192 SQGDSNVSLVEEFRKTLCALWQGS--QTAFSPESLFYVVWKI-MPNFRGYQQQDAHEFMR 248
Query: 285 WLLNTLHSDLR---NTKKNTSIIYE----------CFQGELEVVKEIPKNTISGNDQNTE 331
+LL+ LH +L+ N +SI+ E C G VV I G QN
Sbjct: 249 YLLDHLHLELQGGFNGVPRSSILQENSTLSANNKCCINGASTVVTAI----FGGILQNEV 304
Query: 332 KGSDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF-DGE 389
G TE+ + PFL L LD+P K + P L + L+ F D E
Sbjct: 305 NCLICG-------TESRKFDPFLDLSLDIPSQFRSKRSKNQESGPVCSLRDCLRSFTDLE 357
Query: 390 TV--TEVVRPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNL 441
+ TE+ H + + + + +LPK + LH++RF + K T V FP++ L
Sbjct: 358 ELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGL 417
Query: 442 ELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
++K Y+ P E YDL A +VH G G G Y +
Sbjct: 418 DMKCYLLEPENIGPES--CLYDLAAVVVHHGSGVGSGHYTAYA 458
>gi|125817446|ref|XP_001337596.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Danio
rerio]
gi|125817457|ref|XP_692507.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Danio
rerio]
Length = 398
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 135/317 (42%), Gaps = 31/317 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRKI 244
VGL N+ T F+N +Q L LR++ L + N R K+ L+ F LT+ I
Sbjct: 62 VGLRNLGNTCFMNSILQCLSNTHDLRDYCLRNTHRTDLNNNCRA-KAALMDEFAKLTQTI 120
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSI 303
W + + + +SP +F + K + RF Q + EF+ +LL+ LH+++ R T K+ +
Sbjct: 121 WTSASNEA-ISPSDFKMQIQKYAP-RFVGYNQQDAQEFLRFLLDGLHNEVNRVTVKSRAP 178
Query: 304 IYEC-FQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLGL 357
+ + E E K + + D G +E PF L L
Sbjct: 179 VEDLDHLSEDEKGKRMWNKYLESEDSKVVDLFVGQLKSSLTCSECGFCSTVFDPFWDLSL 238
Query: 358 DLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARM---RYRVTRLPKYMI 414
P+ K E ++ + LF DG R R ++ + + PK ++
Sbjct: 239 -----PIAKTSGEVSLNDCLRLFTKEDVLDGNERPTCHRCKTRRKCTKKFTIQKFPKILV 293
Query: 415 LHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKP 474
LH++RF++ K T VNFP+K L+L+++ + + + Y+L A H G
Sbjct: 294 LHLKRFSECRVRTSKLSTFVNFPLKELDLREF------ASDNSVNAVYNLYAVSNHTGTS 347
Query: 475 EGGFYRVFVQRKSEELW 491
GG Y + + W
Sbjct: 348 LGGHYTAYCRSPCTGEW 364
>gi|260836461|ref|XP_002613224.1| hypothetical protein BRAFLDRAFT_210578 [Branchiostoma floridae]
gi|229298609|gb|EEN69233.1| hypothetical protein BRAFLDRAFT_210578 [Branchiostoma floridae]
Length = 346
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 133/332 (40%), Gaps = 57/332 (17%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY--------RHCKSPLVHRFGDLTRK 243
VGL N+ T F+N +Q L L ++ + ENY K L+ F +L R+
Sbjct: 6 VGLRNLGNTCFMNSILQCLSHTKQLADY-CMNENYIFDLKDSNSSMKGALMKAFANLIRQ 64
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R VSP F + K + RF Q + EF+ +LL LH D+ +
Sbjct: 65 MW--RGSSDAVSPSAFKAQIQKFAP-RFVGYNQQDSQEFLRFLLEGLHDDINKVQVKPKP 121
Query: 304 IYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGD---------------DHDNITTETS 348
Y E+E + + K + N S D H ++T +
Sbjct: 122 SYS-DDEEIEKLSDERKARHAWNKYLLRDNSQITDLFVGQLKSVLQCTHCQHCSVTFD-- 178
Query: 349 RMPFLMLGLDLPPPP------LFKDVMEKNIIPQVPLFNILKKFDGE---TVTEVVRPHV 399
PF L L +P +D +E+ I+ DG+ T ++
Sbjct: 179 --PFWDLSLPIPKKSSIDVRDCLRDFVEEEIL------------DGDEKPTCSKCKARRK 224
Query: 400 ARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLR 459
R+ + RLPK ++LH++RF+ + +K T VNFP+ L L+++ P+
Sbjct: 225 CTKRFFLQRLPKILVLHLKRFSGMR-YRQKLSTTVNFPLAKLNLQEFT---CPESRGSAP 280
Query: 460 SKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+ YDL A H G GG Y + + + W
Sbjct: 281 ATYDLYAVSNHSGTTFGGHYTAYCKYPTTGDW 312
>gi|193700037|ref|XP_001944500.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like
[Acyrthosiphon pisum]
Length = 565
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 133/322 (41%), Gaps = 43/322 (13%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
VG+ NI T ++N +Q L L + L ++ L+ + DL +IW A +
Sbjct: 233 VGIRNIGNTCYMNSVLQCLSNTKSLTDSVL--DDVDGADGKLIRVYRDLLSRIWTASD-S 289
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK------------- 298
V F A + S RF Q + EF+ LL+ LH D+ K
Sbjct: 290 HPVDTTAFKSAFQRLSP-RFAGYEQQDAQEFLRLLLDRLHMDVNRVKVKPRAMPDVDETL 348
Query: 299 KNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLD 358
K+ ++ E +Q L + +G ++T + S G H +IT E F + L
Sbjct: 349 KDNALAAEFWQRYLVTDNSTVVDLFAGQLKSTLECSSCG--HKSITFEV----FWDVSLP 402
Query: 359 LPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVV-RPHVARMR--------YRVTRL 409
LP NI V + ++L F E V + RP + + YR RL
Sbjct: 403 LPSSG------STNI---VSINDLLHNFTQEEVLDFRERPRCSVCKVDRKMFKSYRFQRL 453
Query: 410 PKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIV 469
P+Y++LH++RF + +K +LV FP +L++ Y+ T + + KY+L A
Sbjct: 454 PRYLVLHLKRFQGTQSY-KKITSLVAFPSVSLDMSPYVS-GTARSIQPHACKYNLYAVSN 511
Query: 470 HDGKPEGGFYRVFVQRKSEELW 491
H G P G Y + W
Sbjct: 512 HTGTPIAGHYTAMCKHPVTGDW 533
>gi|323305107|gb|EGA58857.1| Sad1p [Saccharomyces cerevisiae FostersB]
Length = 362
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 122/282 (43%), Gaps = 49/282 (17%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
+G N D+ + + + + P+R+ FL+ N+ + + R +KIW + FK
Sbjct: 53 IGFTNAATYDYAHSVLLLISHMVPVRDHFLL--NHFDNQGEFIKRLSICVKKIWSPKLFK 110
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVE---FMSWLLNTLHSDLRNTKKNTSIIYECF 308
+S +F S + R G+ NP++ F+ WL N + K SI+
Sbjct: 111 HHLSVDDF------XSYLKVREGLNLNPIDPRLFLLWLFNKICXSSNXLK---SILNHSC 161
Query: 309 QGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDV 368
+G++++ K K S +++T + PF +L LDLP F+D
Sbjct: 162 KGKVKIAKVEXKPEAS----------------ESVTGKVIVKPFWVLTLDLPEFSPFEDG 205
Query: 369 MEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVE 428
+ +PQ+ + +L KF + + +TRLP+++I H RF +N+
Sbjct: 206 NSVDDLPQINITKLLTKFTKSRSSS------TSTVFELTRLPQFLIFHFNRFDRNS---- 255
Query: 429 KNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVH 470
+ PVKN ++ + E E L KY L AN+VH
Sbjct: 256 ------DHPVKN---RNQTLVEFSSELEILHVKYRLKANVVH 288
>gi|388856574|emb|CCF49880.1| related to Ubiquitin carboxyl-terminal hydrolase 4 [Ustilago hordei]
Length = 1223
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 155/370 (41%), Gaps = 44/370 (11%)
Query: 157 LEAGHHVYINLRTEKVYCLP-DGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTP 215
+ G+ +++ ++ ++Y P +G +++ GL N+ + ++N T+Q L P
Sbjct: 833 MAPGYAGHLSTQSSRIYTSPTNGRSVDE---SKFGLTGLKNLGNSCYMNSTLQCLSATIP 889
Query: 216 LRNFFLIPENYRHC---------KSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
L F L+ +Y+ + L + L +W + +SP F +A+ K
Sbjct: 890 LARF-LLDGSYKQAINRTNPLGTQGQLANTLAGLIHVMWGEK--YAFISPVTFREAMAKF 946
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGN 326
+ FR Q + EF++ LL+ LH DL + I + E E+ + +P+ S
Sbjct: 947 APS-FRGYDQHDSQEFLAILLDGLHEDLNYVVTRPAAIEMTPERENEL-ETLPQQIASLK 1004
Query: 327 DQNTEKGSDG--------GDDHDNIT------TETSRMPFLMLGLDLPPPPLFKDVMEKN 372
+ + + + G + +T T T+ + L L +P V +
Sbjct: 1005 EWSIYRMRNDSLVVDCFQGQFRNKLTCLTCGKTSTTYEAYTYLSLPVPHGRGANKVTLQQ 1064
Query: 373 IIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPT 432
+ +L K D +P A R ++RLP +++H++RF+ F +K T
Sbjct: 1065 CLDAFVREEVLDKADMWNCPRCKKPRKATKRLSISRLPHILLIHLKRFSFKGPFTDKIDT 1124
Query: 433 LVNFPV-KNLELKDYIPLPTP----------KENEKLRSKYDLIANIVHDGKPEGGFYRV 481
V FP +L+L +Y+P P P +++K YDL A H G G Y
Sbjct: 1125 TVTFPTNTSLDLTNYMPPPLPPGSAGAGALVSQSQKPPYLYDLYAATHHFGSLNTGHYTA 1184
Query: 482 FVQRKSEELW 491
V R ++E W
Sbjct: 1185 TV-RCNKEWW 1193
>gi|355727980|gb|AES09374.1| ubiquitin specific peptidase 3 [Mustela putorius furo]
Length = 472
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 136/343 (39%), Gaps = 62/343 (18%)
Query: 185 SLEDIRHVGLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYRHCKS- 231
S I GL N+ T F+N +QSL + LRN H +S
Sbjct: 104 STAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQ 163
Query: 232 -----PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWL 286
LV F +W + SP V K FR Q + EFM +L
Sbjct: 164 GDNNVSLVEEFRKTLCALWQGS--QTAFSPESLFYVVWKI-MPNFRGYQQQDAHEFMRYL 220
Query: 287 LNTLHSDLR---NTKKNTSIIYE----------CFQGELEVVKEIPKNTISGNDQNTEKG 333
L+ LH +L+ N ++I+ E C G VV I G QN
Sbjct: 221 LDHLHLELQGGFNGVSRSAILQENSALSASNKCCINGASTVVTAI----FGGILQNEVNC 276
Query: 334 SDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNI--IPQVPLFNILKKF-DGE 389
G TE+ + PFL L LD+P F++ KN P L + L+ F D E
Sbjct: 277 LICG-------TESRKFDPFLDLSLDIPSQ--FRNKRSKNQENGPVCSLRDCLRSFTDLE 327
Query: 390 TV--TEVVRPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNL 441
+ TE+ H + + + + +LPK + LH++RF + K T V FP++ L
Sbjct: 328 ELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGL 387
Query: 442 ELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
++K Y L P+ + YDL A +VH G G G Y +
Sbjct: 388 DMKCY--LLEPENSGPEHCLYDLAAVVVHHGSGVGSGHYTAYA 428
>gi|355692783|gb|EHH27386.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Macaca mulatta]
gi|355778099|gb|EHH63135.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Macaca
fascicularis]
Length = 490
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 132/341 (38%), Gaps = 58/341 (17%)
Query: 185 SLEDIRHVGLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYRHCKS- 231
S I GL N+ T F+N +QSL + LRN H +S
Sbjct: 122 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQ 181
Query: 232 -----PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWL 286
LV F +W + SP V K FR Q + EFM +L
Sbjct: 182 GDNNVSLVEEFRKTLCALWQGS--QTAFSPESLFYVVWKI-MPNFRGYQQQDAHEFMRYL 238
Query: 287 LNTLHSDLR---NTKKNTSIIYE----------CFQGELEVVKEIPKNTISGNDQNTEKG 333
L+ LH +L+ N ++I+ E C G VV I G QN
Sbjct: 239 LDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAI----FGGILQNEVNC 294
Query: 334 SDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF-DGETV 391
G TE+ + PFL L LD+P K + P L + L+ F D E +
Sbjct: 295 LICG-------TESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEEL 347
Query: 392 --TEVVRPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLEL 443
TE+ H + + + + +LPK + LH++RF + K T V FP++ L++
Sbjct: 348 DETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDM 407
Query: 444 KDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
K Y+ P E YDL A +VH G G G Y +
Sbjct: 408 KCYLLEPENSGPESCL--YDLAAVVVHHGSGVGSGHYTAYA 446
>gi|241628902|ref|XP_002410027.1| ubiquitin-specific protease, putative [Ixodes scapularis]
gi|215503290|gb|EEC12784.1| ubiquitin-specific protease, putative [Ixodes scapularis]
Length = 340
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 123/312 (39%), Gaps = 43/312 (13%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRKI 244
+GL N+ T F+N +Q L PL + L I + L F L + I
Sbjct: 1 LGLRNLGNTCFMNSIVQCLAHTRPLLEYCLKDCYTSEINNITSSNRGALFEAFATLMKSI 60
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSI 303
W + N + +SP F + K + RF Q + EF+ +LL LH D+ R T + +
Sbjct: 61 WRSSNGEYAISPQAFRSQIQKFA-PRFMGYSQQDSQEFLHYLLQGLHEDINRITSRPRHV 119
Query: 304 IYEC------FQGELEVVKEIPK-------NTISGNDQNTEKGSDGGDDHDNITTETSRM 350
E Q E K + + G ++T K S G H ++T +
Sbjct: 120 TTEIDDNLSDSQKAAEAWKRYLRFDDSKIVDCFVGQLKSTLKCSVCG--HKSVTFD---- 173
Query: 351 PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---TVTEVVRPHVARMRYRVT 407
PF L L +P K I + LF + DG+ T + + +
Sbjct: 174 PFWDLSLPIP-----KSSDSVTIQQCLSLFTKEEVLDGDEKPTCSNCKTRQRCTKSFTIH 228
Query: 408 RLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIAN 467
R PK ++LH++RF+ F K T V FP+ NL+L Y+ + Y+L A
Sbjct: 229 RCPKILVLHLKRFSPGERFRAKLNTRVEFPLTNLDLCPYM-------SNSHYVMYNLYAV 281
Query: 468 IVHDGKPEGGFY 479
H G G Y
Sbjct: 282 SNHSGSTYSGHY 293
>gi|357620428|gb|EHJ72623.1| hypothetical protein KGM_20167 [Danaus plexippus]
Length = 563
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 143/351 (40%), Gaps = 67/351 (19%)
Query: 178 GYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFL------IPENYR---H 228
G +N S +D + VGL N+ T F+N +QSL + +F + N R H
Sbjct: 210 GLPLNGKSQKDKKIVGLKNLGNTCFMNAVLQSLNNIQEFSYYFSQLPSLEMKTNGRKVYH 269
Query: 229 CKSPLVHRFGDLT-----RKIWHARNF-----KGQVSPHEFLQAVMKASKKRFRIGVQSN 278
+S D+ RK+ N K +SP E L V+ RFR Q +
Sbjct: 270 SRSYTRQEMHDVVMAEELRKVLINLNTGGCGSKAAISP-ECLFLVIWKVVPRFRGYQQQD 328
Query: 279 PVEFMSWLLNTLHSDLRN--------TKKNTSIIYECFQGELEVVKEIPKNTISGNDQNT 330
EF+ ++L+ LH++L+ K SI+ F G L Q+
Sbjct: 329 AHEFLRYMLDRLHTELQQLVPDRPEGVKAPASIVTAVFGGTL---------------QSE 373
Query: 331 EKGSDGGDDHDNITTETSRM-PFLMLGLDLP------PPPLFKDVMEKNIIPQVPLFNIL 383
+ G TE+ + PFL L L+LP P D + + + L +
Sbjct: 374 VRCLACG-------TESKKFDPFLDLSLELPESGRHDAPVSLTDCL-ASFVQIEELADTE 425
Query: 384 KKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLEL 443
+ F + + ++ + RLP + LH++RF +N+F K T ++FP+ +L++
Sbjct: 426 RYF----CSSCKCKQKSTKQFWIRRLPNVLCLHLKRFRWHNYFRTKVDTSISFPLLSLDM 481
Query: 444 KDYIPLPTPKENEKLRSK--YDLIANIVHDGKPEG-GFYRVFVQRKSEELW 491
++ P R YDL A IVH G G G Y F +EE W
Sbjct: 482 SGFVLPNVPDTRRSGRGSLLYDLAAVIVHHGSGAGSGHYTAFA--INEEQW 530
>gi|114657520|ref|XP_001173962.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 3 [Pan
troglodytes]
Length = 498
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 133/341 (39%), Gaps = 58/341 (17%)
Query: 185 SLEDIRHVGLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYRHCKS- 231
S I GL N+ T F+N +QSL + LRN H +S
Sbjct: 130 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQ 189
Query: 232 -----PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWL 286
LV F +W + SP V K FR Q + EFM +L
Sbjct: 190 GDNNVSLVEEFRKTLCALWQGS--QTAFSPESLFYVVWKI-MPNFRGYQQQDAHEFMRYL 246
Query: 287 LNTLHSDLR---NTKKNTSIIYE----------CFQGELEVVKEIPKNTISGNDQNTEKG 333
L+ LH +L+ N ++I+ E C G VV I G QN
Sbjct: 247 LDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAI----FGGILQNEVNC 302
Query: 334 SDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF-DGETV 391
G TE+ + PFL L LD+P K + P L + L+ F D E +
Sbjct: 303 LICG-------TESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEEL 355
Query: 392 --TEVVRPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLEL 443
TE+ H + + + + +LPK + LH++RF + K T V FP++ L++
Sbjct: 356 DETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDM 415
Query: 444 KDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
K Y L P+ + YDL A +VH G G G Y +
Sbjct: 416 KCY--LLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYA 454
>gi|332235883|ref|XP_003267134.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2
[Nomascus leucogenys]
Length = 498
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 112/463 (24%), Positives = 164/463 (35%), Gaps = 120/463 (25%)
Query: 125 SVSLSNLNVYACLVCGKYYQGRGQKSHAYTH----------------SLEAGHHVYINLR 168
+V SN + + CL C + GR HA H +A H V ++
Sbjct: 8 AVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQVPLTNHKKSEKQEKAQHTVCMDCS 67
Query: 169 TEKVYCL-PDGYEINDPSLEDIRHV----------------------------------- 192
+ YC D + +ND L ++ V
Sbjct: 68 SYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHRKRKLLENSTLNSKLLKV 127
Query: 193 ----------GLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYRHCK 230
GL N+ T F+N +QSL + LRN H +
Sbjct: 128 NGSTTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR 187
Query: 231 S------PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMS 284
S LV F +W + SP V K FR Q + EFM
Sbjct: 188 SQGDNNVSLVEEFRKTLCALWQGS--QTAFSPESLFYVVWKI-MPNFRGYQQQDAHEFMR 244
Query: 285 WLLNTLHSDLR---NTKKNTSIIYE----------CFQGELEVVKEIPKNTISGNDQNTE 331
+LL+ LH +L+ N ++I+ E C G VV I G QN
Sbjct: 245 YLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAI----FGGILQNEV 300
Query: 332 KGSDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF-DGE 389
G TE+ + PFL L LD+P K + P L + L+ F D E
Sbjct: 301 NCLICG-------TESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLE 353
Query: 390 TV--TEVVRPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNL 441
+ TE+ H + + + + +LPK + LH++RF + K T V FP++ L
Sbjct: 354 ELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGL 413
Query: 442 ELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
++K Y L P+ + YDL A +VH G G G Y +
Sbjct: 414 DMKCY--LLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYA 454
>gi|395746826|ref|XP_003778518.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Pongo abelii]
Length = 498
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 132/341 (38%), Gaps = 58/341 (17%)
Query: 185 SLEDIRHVGLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYRHCKS- 231
S I GL N+ T F+N +QSL + LRN H +S
Sbjct: 130 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQ 189
Query: 232 -----PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWL 286
LV F +W + SP V K FR Q + EFM +L
Sbjct: 190 GDNNVSLVEEFRKTLCALWQGS--QTAFSPESLFYVVWKI-MPNFRGYQQQDAHEFMRYL 246
Query: 287 LNTLHSDLR---NTKKNTSIIYE----------CFQGELEVVKEIPKNTISGNDQNTEKG 333
L+ LH +L+ N ++I+ E C G VV I G QN
Sbjct: 247 LDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAI----FGGILQNEVNC 302
Query: 334 SDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF-DGETV 391
G TE+ + PFL L LD+P K + P L + L+ F D E +
Sbjct: 303 LICG-------TESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEEL 355
Query: 392 --TEVVRPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLEL 443
TE+ H + + + + +LPK + LH++RF + K T V FP++ L++
Sbjct: 356 DETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDM 415
Query: 444 KDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
K Y+ P E YDL A +VH G G G Y +
Sbjct: 416 KCYLLEPENSGPESCL--YDLAAVVVHHGSGVGSGHYTAYA 454
>gi|47681481|gb|AAT37507.1| UBP protein [Homo sapiens]
Length = 498
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 133/341 (39%), Gaps = 58/341 (17%)
Query: 185 SLEDIRHVGLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYRHCKS- 231
S I GL N+ T F+N +QSL + LRN H +S
Sbjct: 130 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQ 189
Query: 232 -----PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWL 286
LV F +W + SP V K FR Q + EFM +L
Sbjct: 190 GDNNVSLVEEFRKTLCALWQGS--QTAFSPESLFYVVWKI-MPNFRGYQQQDAHEFMRYL 246
Query: 287 LNTLHSDLR---NTKKNTSIIYE----------CFQGELEVVKEIPKNTISGNDQNTEKG 333
L+ LH +L+ N ++I+ E C G VV I G QN
Sbjct: 247 LDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAI----FGGILQNEVNC 302
Query: 334 SDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF-DGETV 391
G TE+ + PFL L LD+P K + P L + L+ F D E +
Sbjct: 303 LICG-------TESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEEL 355
Query: 392 --TEVVRPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLEL 443
TE+ H + + + + +LPK + LH++RF + K T V FP++ L++
Sbjct: 356 DETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDM 415
Query: 444 KDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
K Y L P+ + YDL A +VH G G G Y +
Sbjct: 416 KCY--LLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYA 454
>gi|375493565|ref|NP_001243631.1| ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Homo sapiens]
Length = 476
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 133/341 (39%), Gaps = 58/341 (17%)
Query: 185 SLEDIRHVGLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYRHCKS- 231
S I GL N+ T F+N +QSL + LRN H +S
Sbjct: 108 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQ 167
Query: 232 -----PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWL 286
LV F +W + SP V K FR Q + EFM +L
Sbjct: 168 GDNNVSLVEEFRKTLCALWQGS--QTAFSPESLFYVVWKI-MPNFRGYQQQDAHEFMRYL 224
Query: 287 LNTLHSDLR---NTKKNTSIIYE----------CFQGELEVVKEIPKNTISGNDQNTEKG 333
L+ LH +L+ N ++I+ E C G VV I G QN
Sbjct: 225 LDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAI----FGGILQNEVNC 280
Query: 334 SDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF-DGETV 391
G TE+ + PFL L LD+P K + P L + L+ F D E +
Sbjct: 281 LICG-------TESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEEL 333
Query: 392 --TEVVRPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLEL 443
TE+ H + + + + +LPK + LH++RF + K T V FP++ L++
Sbjct: 334 DETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDM 393
Query: 444 KDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
K Y L P+ + YDL A +VH G G G Y +
Sbjct: 394 KCY--LLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYA 432
>gi|15235644|ref|NP_193973.1| Ubiquitin-specific protease family C19-related protein [Arabidopsis
thaliana]
gi|75209745|sp|Q9SUX7.1|FB245_ARATH RecName: Full=Putative F-box protein At4g22420
gi|5738373|emb|CAB52816.1| putative protein [Arabidopsis thaliana]
gi|7269088|emb|CAB79197.1| putative protein [Arabidopsis thaliana]
gi|332659206|gb|AEE84606.1| Ubiquitin-specific protease family C19-related protein [Arabidopsis
thaliana]
Length = 184
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 70/118 (59%), Gaps = 7/118 (5%)
Query: 21 KVVEQSSPSPPRLGFENPLLPLANTYDD-----DDEEEEYGGRGDSGAKVGQNGR--TGE 73
+V+E+S PP LGF N LLPLAN YDD +E ++ R + AK NG GE
Sbjct: 41 RVIERSDSPPPPLGFNNHLLPLANAYDDDDEEEGNELKKSQARRNGVAKGEGNGNKVNGE 100
Query: 74 DDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNL 131
+E DE++DD G+G+ SR VEVRRDCPYLDTVNRQV+ D V L+ +
Sbjct: 101 AQEEVDDEEDDDDDASKGRGKHSRHVEVRRDCPYLDTVNRQVIIIDQFLMLRVPLATM 158
>gi|326933314|ref|XP_003212751.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Meleagris
gallopavo]
Length = 549
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 139/324 (42%), Gaps = 44/324 (13%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L + R ++ L+ F L + +W
Sbjct: 211 TGLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNSRMRTALMSEFAKLIQLLW 270
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIY 305
+ + VSP EF + + + RF Q + EF+ +LL+ LHS++ N ++
Sbjct: 271 TS-SPNDSVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHSEV-----NRVLVR 323
Query: 306 ECFQGELEVVKEIPKNTISGN------DQNTEKGSD--GGDDHDNITTE------TSRMP 351
+ + + +P + S ++ + SD G ++T T+ P
Sbjct: 324 P--RANADTLDHLPDDEKSRQMWRRYQEREDSRVSDLFVGQLKSSLTCSECGYCSTAFDP 381
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMR----YRVT 407
F L L +P K E ++ + LF DG+ R AR R + +
Sbjct: 382 FWDLSLPIPK----KGYGEVTLMDCLRLFTKEDVLDGDEKPTCCRCK-ARTRCTKKFSIQ 436
Query: 408 RLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIAN 467
+ PK ++LH++RF++ K T VNFP+K+L+L+++ + N + Y+L A
Sbjct: 437 KFPKILVLHLKRFSEARIRASKLSTFVNFPLKDLDLREFA---SQSCNHAV---YNLYAV 490
Query: 468 IVHDGKPEGGFYRVFVQRKSEELW 491
H G GG Y + + W
Sbjct: 491 SNHSGTTMGGHYTAYCKSPISSEW 514
>gi|403298210|ref|XP_003939924.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Saimiri
boliviensis boliviensis]
Length = 498
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 133/341 (39%), Gaps = 58/341 (17%)
Query: 185 SLEDIRHVGLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYRHCKS- 231
S I GL N+ T F+N +QSL + LRN H +S
Sbjct: 130 STAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQ 189
Query: 232 -----PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWL 286
LV F +W + SP V K FR Q + EFM +L
Sbjct: 190 GDNNVSLVEEFRKTLCALWQGS--QTAFSPESLFYVVWKI-MPNFRGYQQQDAHEFMRYL 246
Query: 287 LNTLHSDLR---NTKKNTSIIYE----------CFQGELEVVKEIPKNTISGNDQNTEKG 333
L+ LH +L+ N ++I+ E C G VV I G QN
Sbjct: 247 LDHLHLELQGGFNGVSRSTILQENSALSASNKCCINGASTVVTAI----FGGILQNEVNC 302
Query: 334 SDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF-DGETV 391
G TE+ + PFL L LD+P K + P L + L+ F D E +
Sbjct: 303 LICG-------TESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEEL 355
Query: 392 --TEVVRPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLEL 443
TE+ H + + + + +LPK + LH++RF + K T V FP++ L++
Sbjct: 356 DETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDM 415
Query: 444 KDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
K Y L P+ + YDL A +VH G G G Y +
Sbjct: 416 KCY--LLEPENSGPDSCLYDLAAVVVHHGSGVGSGHYTAYA 454
>gi|343426659|emb|CBQ70188.1| related to Ubiquitin carboxyl-terminal hydrolase 4 [Sporisorium
reilianum SRZ2]
Length = 1184
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 162/396 (40%), Gaps = 50/396 (12%)
Query: 134 YACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIR--H 191
+A LV G G S + G+ +++ ++ ++Y P N + ++I+
Sbjct: 771 FAPLVPGTGSAGGNDPSK--KQVMAPGYAGHLSTQSSRMYASP----TNGRNADEIKIGL 824
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHC---------KSPLVHRFGDLTR 242
GL N+ + ++N T+Q L TPL F L+ +Y+ + L L
Sbjct: 825 TGLKNLGNSCYMNSTLQCLSATTPLARF-LLDGSYKQAINRTNPLGTQGQLATALAGLVH 883
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTS 302
+W + VSP F +A+ + + FR Q + EF++ LL+ LH DL +
Sbjct: 884 VMWGEK--YAFVSPVTFREAMARFAPS-FRGYDQHDSQEFLAILLDGLHEDLNYVVTRPA 940
Query: 303 IIYECFQGELEVVKEIPKNTISGNDQNTEKGSDG--------GDDHDNIT------TETS 348
+ + E E+ + +P+ S + + + + G + +T T T+
Sbjct: 941 AVEMTPERENEL-ETLPQQIASVKEWSIYRMRNDSLVVDWFQGQFRNKLTCLTCGKTSTT 999
Query: 349 RMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTR 408
F L L +P V + + +L K D +P A R ++R
Sbjct: 1000 YEAFTYLSLPVPHGRGVGKVALQQCLDAFVREEVLDKADMWNCPRCRKPRKATKRLSISR 1059
Query: 409 LPKYMILHMRRFTKNNFFVEKNPTLVNFPVKN-LELKDYIPLPTP------------KEN 455
LP+ +++H++RF+ F +K T V FP + L+L +Y+P P P ++
Sbjct: 1060 LPQILLIHLKRFSFKGPFTDKIDTTVTFPTNSALDLTNYMPPPLPPGTVVKGGNVAVSQS 1119
Query: 456 EKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+ YDL A H G G Y + R + E W
Sbjct: 1120 QVPPYLYDLYAVTHHFGSLNTGHYTATI-RSNREWW 1154
>gi|344251056|gb|EGW07160.1| Ubiquitin carboxyl-terminal hydrolase 3 [Cricetulus griseus]
Length = 435
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 132/341 (38%), Gaps = 58/341 (17%)
Query: 185 SLEDIRHVGLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYRHCKS- 231
S I GL N+ T F+N +QSL + LRN H +S
Sbjct: 67 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQ 126
Query: 232 -----PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWL 286
LV F +W + SP V K FR Q + EFM +L
Sbjct: 127 GDSNVSLVEEFRKTLCALWQGS--QTAFSPESLFYVVWKI-MPNFRGYQQQDAHEFMRYL 183
Query: 287 LNTLHSDLR---NTKKNTSIIYE----------CFQGELEVVKEIPKNTISGNDQNTEKG 333
L+ LH +L+ N +SI+ E C G VV I G QN
Sbjct: 184 LDHLHLELQGGFNGVPRSSILQENSTLSANNKCCINGASTVVTAI----FGGILQNEVNC 239
Query: 334 SDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF-DGETV 391
G TE+ + PFL L LD+P K + P L + L+ F D E +
Sbjct: 240 LICG-------TESRKFDPFLDLSLDIPSQFRSKRSKNQESGPVCSLRDCLRSFTDLEEL 292
Query: 392 --TEVVRPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLEL 443
TE+ H + + + + +LPK + LH++RF + K T V FP++ L++
Sbjct: 293 DETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDM 352
Query: 444 KDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
K Y+ P E YDL A +VH G G G Y +
Sbjct: 353 KCYLLEPENIGPES--CLYDLAAVVVHHGSGVGSGHYTAYA 391
>gi|344297764|ref|XP_003420566.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Loxodonta africana]
Length = 367
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 133/314 (42%), Gaps = 41/314 (13%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPENYRHCKSPLVHRFGDLTRKIWHAR 248
GL N+ T ++N +Q L ++PL +FL I + C + F L +W
Sbjct: 45 GLRNLGNTCYMNAILQCLCSISPLVEYFLSGKYITALQKSC-GEVATAFAYLMTDMWLGD 103
Query: 249 NFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECF 308
+ G VSP E ++ + F Q + EF+ ++LN LH L+ + + YE
Sbjct: 104 S--GCVSP-EIFRSALGNLYPAFMKKTQQDAQEFLIYVLNDLHEALKKYHRRS---YE-- 155
Query: 309 QGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPF---LMLGLDLPPPPLF 365
+G + + I+ + +G ++D I + + + L LP P +
Sbjct: 156 KGS---TRRCCRKVIATESSIITRLFEGQLNYDVICLKCENCSYKNEVFTVLSLPIPSEY 212
Query: 366 KDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVA--------RMRYRVTRLPKYMILHM 417
+ ++ + F F +T+T + H + +R +++ PK +I H+
Sbjct: 213 ECSLQDCL----QCF-----FQQDTLTWNNQIHCSFCETKQETAVRASISKAPKIIIFHL 263
Query: 418 RRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGG 477
+RF K T +++P+ NL+L YI P +++ KY L A + H G +GG
Sbjct: 264 KRFDVQGTMKRKLRTHIHYPLTNLDLTPYI-CPIFRKHP----KYSLCAVVNHFGDLDGG 318
Query: 478 FYRVFVQRKSEELW 491
Y F + + W
Sbjct: 319 HYTAFCRNSVTQAW 332
>gi|410961062|ref|XP_003987104.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Felis catus]
Length = 503
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 136/343 (39%), Gaps = 62/343 (18%)
Query: 185 SLEDIRHVGLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYRHCKS- 231
S I GL N+ T F+N +QSL + LRN H +S
Sbjct: 135 STTGICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQ 194
Query: 232 -----PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWL 286
LV F +W + SP V K FR Q + EFM +L
Sbjct: 195 GDNNVSLVEEFRKTLCALWQGS--QTAFSPESLFYVVWKI-MPNFRGYQQQDAHEFMRYL 251
Query: 287 LNTLHSDLR---NTKKNTSIIYE----------CFQGELEVVKEIPKNTISGNDQNTEKG 333
L+ LH +L+ N ++I+ E C G VV I G QN
Sbjct: 252 LDHLHLELQGGFNGVSRSAILQENSALSGSNKCCINGASTVVTAI----FGGILQNEVNC 307
Query: 334 SDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNI--IPQVPLFNILKKF-DGE 389
G TE+ + PFL L LD+P F++ KN P L + L+ F D E
Sbjct: 308 LICG-------TESRKFDPFLDLSLDIPSQ--FRNKRSKNQENGPVCSLRDCLRSFTDLE 358
Query: 390 TV--TEVVRPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNL 441
+ TE+ H + + + + +LPK + LH++RF + K T V FP++ L
Sbjct: 359 ELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGL 418
Query: 442 ELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
++K Y L P+ + YDL A +VH G G G Y +
Sbjct: 419 DMKCY--LLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYA 459
>gi|393240409|gb|EJD47935.1| cysteine proteinase [Auricularia delicata TFB-10046 SS5]
Length = 1128
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 134/353 (37%), Gaps = 48/353 (13%)
Query: 179 YEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCK 230
Y + S + GL N+ T ++N TIQ L P FF N K
Sbjct: 755 YPVMSWSEMQVATSGLKNLGNTCYMNATIQCLSATVPFARFFTDGRWKTAVNMVNPLGTK 814
Query: 231 SPLVHRFGDLTRKIWHARNFKGQV---SPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLL 287
L F L ++WH G + SP+ F + V A +F Q + EF+S LL
Sbjct: 815 GQLASAFATLLHEMWH-----GDLPYRSPYAFRKTVC-AFATQFNNSEQHDCQEFLSALL 868
Query: 288 NTLHSDLRN--TKKNTSIIYECFQGELE-----VVKEIPKNTISGNDQNTEKGSDGGDDH 340
+ LH DL K N E + ELE + E D + G
Sbjct: 869 DGLHEDLNRIIAKPNVETTPE-REAELETLAVQIASEQEWQIYQMRDDSLIVDYFQGQFR 927
Query: 341 DNIT------TETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEV 394
+ + T T+ F+ L L +P V + ++ + +
Sbjct: 928 NRVQCLTCHKTSTTYNSFMYLSLPIPAGRGVNKVTLNQCLDHFVREEVIDRENAWNCPNC 987
Query: 395 VRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTP-- 452
P A + ++RLP +++H++RF+ F +K T+V+FP + L+L +Y+P P P
Sbjct: 988 KCPRRATTQLSLSRLPPVLLIHLKRFSVKGPFTDKLETVVDFPQRGLDLTNYMPPPLPPG 1047
Query: 453 -----KENEKLRS----------KYDLIANIVHDGKPEGGFYRVFVQRKSEEL 490
+ LR+ KYDL A H G GG Y + + L
Sbjct: 1048 TARPARAGAPLRTDDPRIQVPPYKYDLYAVTNHYGTLTGGHYTALIASRGTWL 1100
>gi|219127485|ref|XP_002183965.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404688|gb|EEC44634.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 344
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 129/326 (39%), Gaps = 38/326 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCK-----------SPLVHRFGDL 240
GL+N+ T + N IQ M PL +L+ Y+ L+ F +L
Sbjct: 3 CGLSNLGNTCYANSAIQC-MSYLPLLRAYLLSSQYKTAGDLNRDNPLGTGGKLLEEFAEL 61
Query: 241 TRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKN 300
R +W A+ G+ SP F + K + + F Q + EF++++L+ LH D +
Sbjct: 62 LRSMWSAK--LGEKSPVRFRSQLGKVNDQ-FSGADQQDAQEFLNYMLDVLHEDSNKPGEG 118
Query: 301 TSIIYEC--FQGELEVV----------KEIPKNTISGNDQNTEKGSDGGDDHDNITTETS 348
+ C F+G L + + I + G NT N
Sbjct: 119 LYMQSFCVWFRGMLTLRCLSCRFLRRNRSIMADVAMGQVLNTVTCPQCNFSSRNFD---- 174
Query: 349 RMPFLMLGLDLPPPPLFKDVMEKNI-IPQVPLFNILKKFDGETVTEVVRPHVARMRYRVT 407
PF +L + +P + D M+ + + + L D + + +
Sbjct: 175 --PFNLLSIPIPTAQVAGDGMDLGVCLTEFCKTQNLSLSDNWKCPRCKKFRQGQQNMNLW 232
Query: 408 RLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTP--KENEKLRSKYDLI 465
RLP + H++RF + + EK T +NFP+ L+L+ + +P + + S YDLI
Sbjct: 233 RLPDLLTFHLKRFNMSARWREKLTTKINFPLTGLDLRHWCHKESPAVQVDPMESSVYDLI 292
Query: 466 ANIVHDGKPEGGFYRVFVQRKSEELW 491
+ H G GG Y V +E LW
Sbjct: 293 GVVNHYGSMTGGHYA--VSESAEPLW 316
>gi|291398653|ref|XP_002715595.1| PREDICTED: ubiquitin specific protease 33 [Oryctolagus cuniculus]
Length = 873
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 98/235 (41%), Gaps = 41/235 (17%)
Query: 98 LVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQK 149
+ +R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 1 MSALRNHCPHLDSVGEITKEDLIQKSHGTCQDCKVRGPNL--WACLENRCSYVGCGESQV 58
Query: 150 SHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH----------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 59 DHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQAQENNVQQ 118
Query: 192 ---------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY-RHCKSPLVHR-FGDL 240
GL NI T ++N +Q+L PL FFL R K P + + + L
Sbjct: 119 SELAFGQGLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKL 178
Query: 241 TRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR 295
++WH ++ G V P Q + K FR Q + EF+ L++ LH +L+
Sbjct: 179 MTELWH-KSRPGSVVPTNLFQGI-KTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 231
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 539 KVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPTQ----IVTYDL 594
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 595 LSVICHHGTASSGHYIAYCRNNLNNLW 621
>gi|395746828|ref|XP_003778519.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Pongo abelii]
Length = 431
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 133/343 (38%), Gaps = 58/343 (16%)
Query: 183 DPSLEDIRHVGLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYRHCK 230
+ S I GL N+ T F+N +QSL + LRN H +
Sbjct: 61 NGSTTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR 120
Query: 231 S------PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMS 284
S LV F +W + SP V K FR Q + EFM
Sbjct: 121 SQGDNNVSLVEEFRKTLCALWQGS--QTAFSPESLFYVVWKI-MPNFRGYQQQDAHEFMR 177
Query: 285 WLLNTLHSDLR---NTKKNTSIIYE----------CFQGELEVVKEIPKNTISGNDQNTE 331
+LL+ LH +L+ N ++I+ E C G VV I G QN
Sbjct: 178 YLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAI----FGGILQNEV 233
Query: 332 KGSDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF-DGE 389
G TE+ + PFL L LD+P K + P L + L+ F D E
Sbjct: 234 NCLICG-------TESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLE 286
Query: 390 TV--TEVVRPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNL 441
+ TE+ H + + + + +LPK + LH++RF + K T V FP++ L
Sbjct: 287 ELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGL 346
Query: 442 ELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
++K Y+ P E YDL A +VH G G G Y +
Sbjct: 347 DMKCYLLEPENSGPES--CLYDLAAVVVHHGSGVGSGHYTAYA 387
>gi|348572084|ref|XP_003471824.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Cavia porcellus]
Length = 378
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 147/369 (39%), Gaps = 56/369 (15%)
Query: 145 GRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH-------VGLNNI 197
R + +HA HS G + + RTE LPD P+ ED GL N+
Sbjct: 4 SRARPAHAIAHSHAVGLYYALTERTE----LPDPL----PAREDPARPPNPPGVAGLRNL 55
Query: 198 KETDFVNVTIQSLMRVTPLRNFF----LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
T ++N +Q L V PL +F + + C+ + F L +W
Sbjct: 56 GNTCYMNAVLQCLASVPPLAQYFRSGQYVTALRKDCRE-VATAFAYLLTDMWLGD--ADC 112
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELE 313
VSP EF +A + F Q + EF+ ++LN LH LR + + GE
Sbjct: 113 VSPEEF-RAALGRLHPDFTKRTQQDAQEFLIYVLNALHEALRKYHQRS--------GEKR 163
Query: 314 VVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPF---LMLGLDLPPPPLFKDVME 370
+ I+ + +G ++ + + + + L LP P ++ ++
Sbjct: 164 STQRCCSRGIASETSIITQLFEGQLNYSIMCLKCENCSYRNEVFTVLSLPIPSEYECTLQ 223
Query: 371 KNIIPQVPLFNILKKFDGETVTEVVRPHVA--------RMRYRVTRLPKYMILHMRRFTK 422
+ F F +T+T + H + +R +++ PK +I H++RF
Sbjct: 224 DCL----QCF-----FQQDTLTWNNQIHCSFCETKQETAVRASISKPPKTIIFHLKRFDI 274
Query: 423 NNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVF 482
K T +++P+ NL+L YI P +++ KY+L A + H G +GG Y
Sbjct: 275 QGQVKRKLRTDIHYPLTNLDLTPYI-CPVFRKHP----KYNLCAVVNHFGDLDGGHYTAS 329
Query: 483 VQRKSEELW 491
+ + W
Sbjct: 330 CRNSVTQAW 338
>gi|90075368|dbj|BAE87364.1| unnamed protein product [Macaca fascicularis]
Length = 431
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 133/343 (38%), Gaps = 58/343 (16%)
Query: 183 DPSLEDIRHVGLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYRHCK 230
+ S I GL N+ T F+N +QSL + LRN H +
Sbjct: 61 NGSTTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR 120
Query: 231 S------PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMS 284
S LV F +W + SP V K FR Q + EFM
Sbjct: 121 SQGDNNVSLVEEFRKTLCALWQGS--QTAFSPESLFYVVWKI-MPNFRGYQQQDAHEFMR 177
Query: 285 WLLNTLHSDLR---NTKKNTSIIYE----------CFQGELEVVKEIPKNTISGNDQNTE 331
+LL+ LH +L+ N ++I+ E C G VV I G QN
Sbjct: 178 YLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAI----FGGILQNEV 233
Query: 332 KGSDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF-DGE 389
G TE+ + PFL L LD+P K + P L + L+ F D E
Sbjct: 234 NCLICG-------TESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLE 286
Query: 390 TV--TEVVRPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNL 441
+ TE+ H + + + + +LPK + LH++RF + K T V FP++ L
Sbjct: 287 ELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGL 346
Query: 442 ELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
++K Y+ P E YDL A +VH G G G Y +
Sbjct: 347 DMKCYLLEPENSGPES--CLYDLAAVVVHHGSGVGSGHYTAYA 387
>gi|194376096|dbj|BAG62807.1| unnamed protein product [Homo sapiens]
Length = 476
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 133/341 (39%), Gaps = 58/341 (17%)
Query: 185 SLEDIRHVGLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYRHCKS- 231
S I GL N+ T F+N +QSL + LRN H +S
Sbjct: 108 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQ 167
Query: 232 -----PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWL 286
LV F +W + SP V K FR Q + EFM +L
Sbjct: 168 GDNNVSLVEEFRKTLCALWQGS--QTAFSPESLFYVVWKI-MPNFRGYQQQDAHEFMRYL 224
Query: 287 LNTLHSDLR---NTKKNTSIIYE----------CFQGELEVVKEIPKNTISGNDQNTEKG 333
L+ LH +L+ N ++I+ E C G VV I G QN
Sbjct: 225 LDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAI----FGGILQNEVNC 280
Query: 334 SDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF-DGETV 391
G TE+ + PFL L LD+P K + P L + L+ F D E +
Sbjct: 281 LICG-------TESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEEL 333
Query: 392 --TEVVRPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLEL 443
TE+ H + + + + +LPK + LH++RF + K T V FP++ L++
Sbjct: 334 DETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDM 393
Query: 444 KDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
K Y L P+ + YDL A +VH G G G Y +
Sbjct: 394 KCY--LLEPENSGPESCLYDLAAVVVHHGSGVGSGHYIAYA 432
>gi|156373862|ref|XP_001629529.1| predicted protein [Nematostella vectensis]
gi|156216531|gb|EDO37466.1| predicted protein [Nematostella vectensis]
Length = 452
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 105/436 (24%), Positives = 158/436 (36%), Gaps = 125/436 (28%)
Query: 134 YACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLP-DGYEINDPSLEDIRHV 192
+ CL CG + GR +HA +H + H ++ +C D + IND D++ V
Sbjct: 9 WICLRCGIVHCGRYVNAHAKSHCEKYPQHSVCLDQSLAAFCYSCDEFIINDTKGGDVQRV 68
Query: 193 ----------------------------------------GLNNIKETDFVNVTIQSLMR 212
GL N+ T F+N +QSL
Sbjct: 69 REIILERQNREAENAKKKRLISRTRFLRNQQNIGRIKQLPGLRNLGNTCFMNAVLQSLSN 128
Query: 213 VTPLRNFFLI---------------PENYRHCKS---PLVHRFGDLTRKIWHARNFKGQV 254
+ +F P R KS LV + +W
Sbjct: 129 IQTFSCYFKDLPAFELRTDTSCEKNPYFTRSRKSDDGCLVEELRKVLCALWQGNCVSH-- 186
Query: 255 SPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEV 314
SP V K RFR Q + EFM +L++ LH++L ++K CF G+ +
Sbjct: 187 SPEALFSTVWKVVP-RFRGYQQQDAHEFMHYLMDRLHTELLLSQK------ACF-GQDTI 238
Query: 315 VKEIPKNTISGNDQNTEKGSDGGDDHDNIT-----TETSRM-PFLMLGLDLPPP------ 362
V G GG +T TE+ ++ PFL L L++PP
Sbjct: 239 VT----------------GIFGGILQSEVTCLTCMTESRKLDPFLDLSLEIPPEFQTRKA 282
Query: 363 -----PL--FKDVMEKNI----IPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPK 411
P +D M+ + + + L+ LK E T+ ++ + RLP
Sbjct: 283 KSRENPFCQLEDCMKHFVALEKLAESELYMCLKCKKKEQSTK---------KFWIQRLPN 333
Query: 412 YMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSK---YDLIANI 468
+ LH++RF F K T V FP++ L++ Y T K EK +K YDL A +
Sbjct: 334 VLCLHLKRFRFQAFLRSKIDTYVQFPIRGLDMSPY----TLKGQEKGETKPVLYDLAAVV 389
Query: 469 VHDGK-PEGGFYRVFV 483
VH G G Y F
Sbjct: 390 VHHGSGVSAGHYTTFA 405
>gi|164655843|ref|XP_001729050.1| hypothetical protein MGL_3838 [Malassezia globosa CBS 7966]
gi|159102939|gb|EDP41836.1| hypothetical protein MGL_3838 [Malassezia globosa CBS 7966]
Length = 808
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 140/350 (40%), Gaps = 56/350 (16%)
Query: 184 PSLEDIR--HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLI--------PENYRHCKSPL 233
P DIR GL N +T ++N TIQ L L + L +N + L
Sbjct: 443 PKPRDIRIGLTGLRNFGQTCYMNATIQCLSASVLLAQYLLDGTYKRAINTQNPLGTRGAL 502
Query: 234 VHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSD 293
+ F L R +W ++ V+P F +A+ + + FR Q + EF+ +LL+ LH D
Sbjct: 503 ANAFASLLRALWSEQSVS--VAPTAFREAIGQFAPA-FRGNEQQDSQEFLMFLLDGLHED 559
Query: 294 LRNTKKNTSIIY--ECFQGELEVVKE-----------------IPKNTISGNDQNTEKGS 334
L + + E Q EL + + I +T G +N
Sbjct: 560 LNLVVQRPPALELGEAQQAELSRLPQQLASVAEWSLYRRRNDSIVVDTFQGQLRNQLTCL 619
Query: 335 DGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLF---NILKKFDGETV 391
G H +IT F+ L L P P + V ++ + F +L+K +
Sbjct: 620 TCG--HTSITYNA----FMSLSL---PVPTGRGVSRASLYQCMDAFVREEVLEKGNAWHC 670
Query: 392 TEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPT 451
+ +P + R + RLP +I+H++RFT K T V F L+L +++P P
Sbjct: 671 PKCKKPRRSTKRLSLARLPPVLIIHLKRFTFRGPASNKIETPVVFATDALDLSNFMPPPL 730
Query: 452 P----------KENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
P E+++ YDL A H G G Y V +++ +W
Sbjct: 731 PPGTSVRGIPISESQRPPYLYDLFAVTHHFGTLHSGHYTASV--RTQGIW 778
>gi|332017535|gb|EGI58246.1| Ubiquitin carboxyl-terminal hydrolase 8 [Acromyrmex echinatior]
Length = 1005
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 128/313 (40%), Gaps = 27/313 (8%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFF--------LIPENYRHCKSPLVHRFGDLTRK 243
GL N+ + ++N IQ L T L +F L N + +V + +
Sbjct: 671 TGLKNLGNSCYMNSIIQCLSNTTNLAKYFTDNSYADDLNTNNDNMTQGQVVEEVAQVIKA 730
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W + +K +SP++ L+ + K +F Q + EF+++LL+ +H++L KKN +
Sbjct: 731 LWRGQ-YKS-ISPYD-LKVAVGQYKLQFESYEQQDSHEFLTFLLDWMHNEL---KKNVKM 784
Query: 304 IYECFQGELEVVKEI--PKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPP 361
E E E K + ++ IS + + +T L + L
Sbjct: 785 PIEITNAEKEWDKAMNSQRSIISDLFFGQLRSTITCSFCKQASTTYETFNSLTMSLSQSN 844
Query: 362 PPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFT 421
D MEK + Q K G + P A ++ +L +++H+ RF
Sbjct: 845 RCTLNDCMEKFVTGQ--------KVSGWKCPKCQTPRDATKKFDFVKLAPIVVIHLNRFA 896
Query: 422 KNNFFVEKNPTLVNFPVKNLELKDYIPLPTPK---ENEKLRSKYDLIANIVHDGKPEGGF 478
++ ++EK T V+FP+ LK Y+ L K N Y L A H G +GG
Sbjct: 897 ESGGWLEKRNTAVDFPLTGFNLKPYLVLENTKAIMSNNIRNYNYTLYAISNHYGTMDGGH 956
Query: 479 YRVFVQRKSEELW 491
Y F + ++ W
Sbjct: 957 YTAFCKNSTQNKW 969
>gi|196016423|ref|XP_002118064.1| hypothetical protein TRIADDRAFT_33494 [Trichoplax adhaerens]
gi|190579367|gb|EDV19464.1| hypothetical protein TRIADDRAFT_33494 [Trichoplax adhaerens]
Length = 342
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 133/326 (40%), Gaps = 47/326 (14%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNF--------FLIPENYRHCKSPLVHRFGDLTRK 243
VGL N+ T F+N +Q L L +F F+ ++ H K L+ + L R
Sbjct: 3 VGLKNLGNTCFMNSILQCLSNTKALTSFVLDNSYSRFISGKSSMHGK--LMEAYASLMRS 60
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+W + + +SP F + + + RF Q + EF+ +LL LH DL N+++
Sbjct: 61 MWKSDTKETALSPATFKSQIQRFAP-RFVGYSQQDAQEFLRFLLAGLHEDLLHNSREKPK 119
Query: 303 II----YECFQGELEVVK--EIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM--PFLM 354
II Y+ Q E + V ++ K+T G + S PF
Sbjct: 120 IISTEEYDELQPEDKAVYCWKLYKSTDDSKVAELFVGQLKSTLECTVCKNQSVTFDPFWD 179
Query: 355 LGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---------TVTEVVRPHVARMRYR 405
L L +P I + L + LK F E T ++ V +
Sbjct: 180 LSLPIPK------------ISTITLLDCLKLFTREETLSGDNMPTCSKCKTKTVCTKKLS 227
Query: 406 VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLI 465
V + P+ +++H +RF+ ++ + N TL++FP+ L+L ++ + KY+L
Sbjct: 228 VQKFPQILVIHFKRFSGIHYRTKLN-TLIDFPIDKLDLLNF-----AGTTSTISCKYNLY 281
Query: 466 ANIVHDGKPEGGFYRVFVQRKSEELW 491
A H G GG Y + + + W
Sbjct: 282 AISNHSGSTVGGHYTAYCKSPHTQTW 307
>gi|449266379|gb|EMC77432.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Columba livia]
Length = 490
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 112/462 (24%), Positives = 161/462 (34%), Gaps = 120/462 (25%)
Query: 126 VSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAG----------------HHVYINLRT 169
V SN + + CL C + GR HA H +A H V ++ +
Sbjct: 1 VCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQIPMTNHKKTEKQEKVQHTVCMDCSS 60
Query: 170 EKVYCL-PDGYEINDPSLEDIRHV------------------------------------ 192
YC D + +ND L ++ V
Sbjct: 61 YSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTSDRHRKRKLLENSSLNSKLLKVN 120
Query: 193 ---------GLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYRHCKS 231
GL N+ T F+N +QSL + LRN H +S
Sbjct: 121 GSTTALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYHTRS 180
Query: 232 ------PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSW 285
LV F +W + SP V K FR Q + EFM +
Sbjct: 181 QGDNNVSLVEEFRKTLCALWQGS--QTAFSPESLFYVVWKI-MPNFRGYQQQDAHEFMRY 237
Query: 286 LLNTLHSDLR---NTKKNTSIIYE----------CFQGELEVVKEIPKNTISGNDQNTEK 332
LL+ LH +L+ N + I+ E C G VV I G QN
Sbjct: 238 LLDHLHLELQGGFNGVSRSVILQENATLSASNKCCINGASTVVTAI----FGGILQNEVN 293
Query: 333 GSDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF-DGET 390
G TE+ + PFL L LD+P K + P L + L+ F D E
Sbjct: 294 CLICG-------TESRKFDPFLDLSLDIPSQFRNKRTKNQENGPMCTLRDCLRSFTDLEE 346
Query: 391 V--TEVVRPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLE 442
+ TE+ H + + + + +LPK + LH++RF + K T V FP++ L+
Sbjct: 347 LDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLD 406
Query: 443 LKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
+K Y+ P E YDL A +VH G G G Y +
Sbjct: 407 MKCYLLEPENSGPESCL--YDLAAVVVHHGSGVGSGHYTAYA 446
>gi|3800764|gb|AAC68865.1| ubiquitin specific protease 66 [Gallus gallus]
Length = 587
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 137/324 (42%), Gaps = 44/324 (13%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L + R ++PL+ F L + +W
Sbjct: 46 TGLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNSRMRTPLMSEFAKLIQLLW 105
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIY 305
+ VSP EF + + + RF Q + EF+ +LL+ LH ++ N ++
Sbjct: 106 TSSP-NDSVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHGEV-----NRVLVR 158
Query: 306 ECFQGELEVVKEIPKNTISGN------DQNTEKGSD--GGDDHDNITTE------TSRMP 351
+ + + +P + S ++ + SD G ++T T+ P
Sbjct: 159 P--RANADTLDHLPDDEKSRQMWRRYQEREDSRVSDLFVGQLKSSLTCSECGYCSTAFDP 216
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMR----YRVT 407
F L L +P K E ++ + LF DG+ R AR R + +
Sbjct: 217 FWDLSLPIPK----KGYGEVTLMDCLRLFTKEDVLDGDEKPTCCRCK-ARTRCTKKFSIQ 271
Query: 408 RLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIAN 467
+ PK ++LH++RF++ K T VNFP+K+L+L+++ + Y+L A
Sbjct: 272 KFPKILVLHLKRFSEARIRASKLTTFVNFPLKDLDLREF------ASQSCNHAVYNLYAV 325
Query: 468 IVHDGKPEGGFYRVFVQRKSEELW 491
H G GG Y + + + W
Sbjct: 326 ANHSGTTMGGHYTAYCKEPHLQEW 349
>gi|348521632|ref|XP_003448330.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like
[Oreochromis niloticus]
Length = 404
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 126/305 (41%), Gaps = 27/305 (8%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCK-----SPLVHRFGDLTRKIWH 246
GL NI T F+N +Q L LR++ L+ ++Y+H K + L+ F + +W
Sbjct: 63 TGLRNIGNTCFLNAVVQCLSHTCGLRDYCLL-KSYKHEKFSKEEAKLMEAFSKVLSGLWG 121
Query: 247 ARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL------RNTKKN 300
+ V+P +F +A F Q + EF+ +LL+ LH+++ R T K
Sbjct: 122 VNEGETVVNPRQFYNVFTEAVPY-FSGYSQQDAQEFLRFLLDKLHTEINRRPYIRRTGKE 180
Query: 301 TSIIYECFQGELEVVKEIPKNTISGNDQ---NTEKGSDGGDDHDNITTETSRMPFLMLGL 357
+ F+ E + K + +D + G H ++ + S + L
Sbjct: 181 PEQKFARFRISEEAAV-MWKKHLERDDSIIVDLFSGQLRSSLHCSVCSHYSNTFDVFCDL 239
Query: 358 DLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---TVTEVVRPHVARMRYRVTRLPKYMI 414
LP P E + + LF+ +K D E R R + R P+ ++
Sbjct: 240 SLPIPKR-SSSGEVTLRECLDLFSQEEKLDKENSPMCERCNRRTECTKRLSIQRFPQVIV 298
Query: 415 LHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKP 474
+H+ RFT + + + K+ V+FP+ NL+L Y P+ YDL A H G
Sbjct: 299 IHLNRFTTSRWSISKSTVYVSFPLTNLDLGPYGPVDCGS------VLYDLYAICNHAGTV 352
Query: 475 EGGFY 479
G Y
Sbjct: 353 NMGHY 357
>gi|449267415|gb|EMC78360.1| Ubiquitin carboxyl-terminal hydrolase 2, partial [Columba livia]
Length = 450
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 145/342 (42%), Gaps = 46/342 (13%)
Query: 174 CLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------ 227
C E ND L+ + GL N+ T F+N +Q L LR++ L + R
Sbjct: 96 CSSQPCERNDGYLQGL--TGLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNS 153
Query: 228 HCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLL 287
++ L+ F L + +W + + VSP EF + + + RF Q + EF+ +LL
Sbjct: 154 RMRTALMSEFAKLIQLLWTS-SPNENVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLL 211
Query: 288 NTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGN------DQNTEKGSD--GGDD 339
+ LHS++ N ++ + + + +P + S ++ + SD G
Sbjct: 212 DGLHSEV-----NRVLVRP--RASTDTLDHLPDDEKSRQMWRRYQEREDSRISDLFVGQL 264
Query: 340 HDNITTE------TSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE 393
++T T+ PF L L +P K E ++ + LF DG+
Sbjct: 265 KSSLTCSECGYCSTAFDPFWDLSLPIPK----KSYGEVTLMDCLRLFTKEDVLDGDEKPT 320
Query: 394 VVRPHVARMR----YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPL 449
R AR R + + + PK ++LH++RF++ K T VNF +K+L+L+++
Sbjct: 321 CCRCK-ARTRCTKKFSIQKFPKILVLHLKRFSEARIRTSKLTTFVNFQLKDLDLREFA-- 377
Query: 450 PTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+ N + Y+L A H G GG Y + + W
Sbjct: 378 -SQSCNHAV---YNLYAVSNHSGTTMGGHYTAYCKNPVSSEW 415
>gi|392887711|ref|NP_493434.3| Protein USP-3 [Caenorhabditis elegans]
gi|379657283|emb|CAC14423.3| Protein USP-3 [Caenorhabditis elegans]
Length = 550
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 136/314 (43%), Gaps = 52/314 (16%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIP---ENYRHC-KSPL----VHRFGDLTRKI 244
G+ N+ T F+N +Q+L ++ R + + E+Y H K P D RK+
Sbjct: 230 GMRNVGNTCFMNAVLQALASISEFREYIMSLSSLEDYIHDEKEPKNGGNYCYLTDEYRKL 289
Query: 245 W---HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNT 301
AR+F+ +P+EF +A + RFR Q + EFM + +++LH+++R +K
Sbjct: 290 LISQSARSFREPTAPNEFREAFISVCP-RFRGFRQHDSHEFMRYFMDSLHTEMRKCRKLP 348
Query: 302 SI-------IYECFQGELE--VVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPF 352
+ I + F+G L+ V+ + +N + D+ F
Sbjct: 349 GMPDDKHTPISKYFEGTLQSSVICQTCRNCSNKIDE-----------------------F 385
Query: 353 LMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKY 412
+ L LD+P V + + +L+K + + + + +LP+
Sbjct: 386 MDLSLDIPAQRNASKVRLSDCLSTFFKLEMLEKGEKPECAKCKTKQTCSKQMFIRKLPQV 445
Query: 413 MILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG 472
+ LHM+RF N KN +++FP+ L++ ++ ++++ Y L + IVH G
Sbjct: 446 LCLHMKRFRDNG---GKNDAIIDFPMGQLDVTQFL----TDDSDEAPCTYSLQSIIVHIG 498
Query: 473 KPEG-GFYRVFVQR 485
G G Y F +R
Sbjct: 499 YGCGSGHYIAFGKR 512
>gi|198433676|ref|XP_002129026.1| PREDICTED: similar to ubiquitin specific protease 41 [Ciona
intestinalis]
Length = 543
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 134/345 (38%), Gaps = 80/345 (23%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRH-------CKSPLVHRFGDLTRK 243
+VGL NI T F+N +Q L T LR + + E Y+ K L+ F ++ +
Sbjct: 200 NVGLRNIGNTCFMNSILQCLSNTTILREY-CMDETYKGEINRNSPMKGDLMRAFVEVLVR 258
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRN------- 296
+W SP+ F + K S RF Q + EF+ +LL LH D+
Sbjct: 259 LWKPNGISH--SPNNFKSKIQKFSP-RFMGYEQQDCQEFLRFLLEGLHEDINRVRIKSKE 315
Query: 297 ---------------------TKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSD 335
T K+ S I++ F G+LE E +
Sbjct: 316 PLRELSHLSPQEKARATWSWYTTKDDSFIFDLFVGQLESSLECQECR------------- 362
Query: 336 GGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD-GETVTEV 394
H ++T + PF L L P+ K + + + + L F ET+ +
Sbjct: 363 ----HTSLTYD----PFWDLSL-----PISKKMYSNEV---TTITDCLDNFTREETLDKD 406
Query: 395 VRPHVARMRYRVT--------RLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDY 446
+P R + R T + PK ++LH++RF + + + +K LV FPV +L L+++
Sbjct: 407 EKPICERCKVRRTMTKKLSIHKFPKVLVLHLKRFNEGSRYRQKLNNLVKFPVTSLNLRNF 466
Query: 447 IPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+ L YDL A H G GG Y + S W
Sbjct: 467 A---SKTREGNLPPTYDLYAVSNHCGSCYGGHYTAYCYNSSSHAW 508
>gi|401883333|gb|EJT47546.1| ubiquitin-specific protease [Trichosporon asahii var. asahii CBS
2479]
Length = 1164
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 132/328 (40%), Gaps = 53/328 (16%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T ++N TIQ L P FFL N + L H F +L
Sbjct: 803 TGLKNLGNTCYMNSTIQCLSATLPFARFFLDGHYKKEVNLTNTLGTRGNLAHAFAELLSA 862
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W + +SP F Q + K F Q + EF+S++++ LH DL +
Sbjct: 863 LW--KEHYTFLSPITFRQKSIINFKSDFAGTEQHDSQEFLSFVMDGLHEDLNRVRVKPKP 920
Query: 304 IYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTE-TSRMPFL----MLGLD 358
+ Q E E+ + +P S + K + D + +RM L L LD
Sbjct: 921 VEMTPQREAEL-ETLPPQIASDKEWAIYKQRNDSFIVDVFQGQYMNRMECLTCHKWLTLD 979
Query: 359 LPP---PPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYR---------- 405
LP P + ++ ++ + P++ DG+ +R ++ YR
Sbjct: 980 LPTSRKPIVLPELFDRYVQPEI--------LDGDDKCPKLRQLRPKLTYRFCPRCKKNRR 1031
Query: 406 ------VTRLPKYMILHMRRFTKNNF--FVEKNPTLVNFPVKNLELKDYIPLPTPKENEK 457
+ RLP +++ ++RF N F +K+ T V FP+KNL+L Y+P+ P E
Sbjct: 1032 ASKTMTIVRLPPVLMIQLKRFLPVNGGQFWDKSDTPVIFPLKNLDLTRYVPVRQPNGTED 1091
Query: 458 LRS--------KYDLIANIVHDGKPEGG 477
L KYDL A H G G
Sbjct: 1092 LDDPRTQIGPFKYDLYAVSNHMGTLSSG 1119
>gi|89269005|emb|CAJ81533.1| ubiquitin specific protease 3 [Xenopus (Silurana) tropicalis]
Length = 522
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 107/468 (22%), Positives = 162/468 (34%), Gaps = 120/468 (25%)
Query: 124 CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAG------------------HHVYI 165
CSV SN + + CL C + GR HA H +A H V +
Sbjct: 29 CSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQAPLNCHKRQEKTDKDRMQHTVCM 88
Query: 166 NLRTEKVYCL-PDGYEINDPSLEDIRHV-------------------------------- 192
+ + YC D + +ND L ++ V
Sbjct: 89 DCSSYSTYCYRCDDFVVNDTKLCLVQKVREHLQNLENSAFTAERHRKRKFLESASLSKKL 148
Query: 193 -------------GLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYR 227
GL N+ T F+N +QSL + LRN
Sbjct: 149 LKVNGSTTALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTY 208
Query: 228 HCKS------PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVE 281
H +S LV F +W + SP V K FR Q + E
Sbjct: 209 HTRSQGDVNVSLVEEFRKTLCALWQGN--QTAFSPESLFYVVWKI-MPNFRGYQQQDAHE 265
Query: 282 FMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSD------ 335
FM +LL+ LH +L+ F G V + S ++ G+
Sbjct: 266 FMRYLLDHLHLELQGE----------FDGSSHSVLSQANCSRSACNKCCINGASTVVTSV 315
Query: 336 -GGDDHDNIT-----TETSRM-PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF-D 387
GG + + TE+ + PFL L LD+P K + P L + L+ F D
Sbjct: 316 FGGVLQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRCKNQENGPTCTLRDCLRSFTD 375
Query: 388 GE--------TVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVK 439
E T + + + ++ + +LPK + LH++RF + K T V+FP++
Sbjct: 376 LEELDETELYTCLKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVDFPLR 435
Query: 440 NLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFVQRK 486
L++K ++ P E YDL A +VH G G G Y + K
Sbjct: 436 GLDMKSFLLEPENIGPESCL--YDLAAVVVHHGSGVGSGHYTAYATHK 481
>gi|354504731|ref|XP_003514427.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 1
[Cricetulus griseus]
gi|354504733|ref|XP_003514428.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 2
[Cricetulus griseus]
gi|354504735|ref|XP_003514429.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 3
[Cricetulus griseus]
Length = 613
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 134/322 (41%), Gaps = 40/322 (12%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R + + L+ F L + IW
Sbjct: 275 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSNAHTALMEEFAKLIQTIW 334
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-------RNTK 298
+ + VSP EF + + + RF Q + EF+ +LL+ LH+++ + +
Sbjct: 335 TS-SPNDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKPSP 392
Query: 299 KNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLD 358
+N + + +G K + + D + D T PF L L
Sbjct: 393 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 452
Query: 359 LPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEV-VRPHVARMRYR--------VTRL 409
+ K P+V L + ++ F E V + +P R R R V R
Sbjct: 453 I----------AKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCYRCRARKRCIKKFSVQRF 502
Query: 410 PKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIV 469
PK ++LH++RF+++ K T VNFP+++L+L+++ EN + Y+L A
Sbjct: 503 PKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFA-----SENTN-HAVYNLYAVSN 556
Query: 470 HDGKPEGGFYRVFVQRKSEELW 491
H G GG Y + + W
Sbjct: 557 HSGTTMGGHYTAYCRSPVTGEW 578
>gi|296417169|ref|XP_002838233.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634156|emb|CAZ82424.1| unnamed protein product [Tuber melanosporum]
Length = 1078
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 133/363 (36%), Gaps = 90/363 (24%)
Query: 188 DIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHC--------KSPLVHRFGD 239
+I GL N+ T ++N +Q + PL +FL H + L F
Sbjct: 716 NIGTTGLKNLGNTCYMNAVLQCMSGTIPLSRYFLDGSYKSHVSKDNPLGSRGVLAEAFAA 775
Query: 240 LTRKIWHAR-NFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL---- 294
+ R +W +F ++ ++ V + FR Q + EF+ +LL+ LH DL
Sbjct: 776 IVRHLWSGEYSFISPIT----IKDVAGRLNEMFRNNDQQDAQEFLEFLLDGLHEDLNPHA 831
Query: 295 ------------------------------RNTKKNTSIIYECFQGELEVVKEIPKNTIS 324
R T N S++ FQG+L +
Sbjct: 832 NHGKLRPLNDDEECRRERLPVQLASIIEWQRYTHHNYSVVVNWFQGQLSSMLSC---LTC 888
Query: 325 GNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPP----LFKDVMEKNIIPQVPLF 380
G T T+ PF+ L L +P +D +E+ + +
Sbjct: 889 GR------------------TSTTYSPFMYLSLPIPATKSNNFTLRDCLEEFVGEET--- 927
Query: 381 NILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKN 440
L+ D + A + +TRLP +I+H++RFT + +K T V+ P+++
Sbjct: 928 --LEGNDAWLCPRCKKARKATKKLTITRLPHILIIHLKRFTNRGPWRDKLNTFVDIPLRH 985
Query: 441 LELKDYIPLPTPKENEKLRSK------------YDLIANIVHDGKPEGGFYRVFVQRKSE 488
L+L Y+P P +E R+ YDL A H G GG Y V+ +
Sbjct: 986 LDLTKYMPPPL-ASDELPRTLPPPTAETTPPFFYDLYAICNHYGTINGGHYTAVVRSSCK 1044
Query: 489 ELW 491
W
Sbjct: 1045 GGW 1047
>gi|432092259|gb|ELK24883.1| Ubiquitin carboxyl-terminal hydrolase 3 [Myotis davidii]
Length = 449
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 135/343 (39%), Gaps = 62/343 (18%)
Query: 185 SLEDIRHVGLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYRHCKS- 231
S I GL N+ T F+N +QSL + LRN H +S
Sbjct: 81 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQ 140
Query: 232 -----PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWL 286
LV F +W + SP V K FR Q + EFM +L
Sbjct: 141 GDNNVSLVEEFRKTLCALWQGS--QTAFSPESLFYVVWKIMPN-FRGYQQQDAHEFMRYL 197
Query: 287 LNTLHSDLR---NTKKNTSIIYE----------CFQGELEVVKEIPKNTISGNDQNTEKG 333
L+ LH +L+ N + I+ E C G VV I G QN
Sbjct: 198 LDHLHLELQGGFNGVSCSPILQENSTLSASNKCCINGASTVVTAI----FGGILQNEVNC 253
Query: 334 SDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNI--IPQVPLFNILKKF-DGE 389
G TE+ + PFL L LD+P F++ KN P L + L+ F D E
Sbjct: 254 LICG-------TESRKFDPFLDLSLDIPSQ--FRNKRSKNQENGPVCSLRDCLRSFTDLE 304
Query: 390 TV--TEVVRPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNL 441
+ TE+ H + + + + +LPK + LH++RF + K T V FP++ L
Sbjct: 305 ELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGL 364
Query: 442 ELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
++K Y L P+ + YDL A +VH G G G Y +
Sbjct: 365 DMKCY--LLEPENSGPENCLYDLAAVVVHHGSGVGSGHYTAYA 405
>gi|449489446|ref|XP_002194208.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Taeniopygia
guttata]
Length = 625
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 136/323 (42%), Gaps = 42/323 (13%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L + R ++ L+ F L + +W
Sbjct: 287 TGLRNLGNTCFMNSILQCLSNSKELRDYCLQNQYLRDLNNNSRMRTALMSEFAKLIQLLW 346
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-----RNTKKN 300
+ + VSP EF + + + RF Q + EF+ +LL+ LHS++ R
Sbjct: 347 TS-SPNESVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHSEVNRVLVRPRAST 404
Query: 301 TSIIY----ECFQGELEVVKEIPKNTIS----GNDQNTEKGSDGGDDHDNITTETSRMPF 352
S+ + E + +E + IS G +++ S+ G T+ PF
Sbjct: 405 DSLDHLPDDEKSRQMWRRYQEREDSRISDLFVGQLKSSLTCSECG------YCSTAFDPF 458
Query: 353 LMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMR----YRVTR 408
L L +P K E ++ + LF DG+ R AR R + + +
Sbjct: 459 WDLSLPIPK----KGYGEVTLMDCLRLFTKEDVLDGDEKPTCCRCK-ARTRCTKKFSIQK 513
Query: 409 LPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANI 468
PK ++LH++RF++ K T VNFP+K+L+L+++ + Y+L A
Sbjct: 514 FPKILVLHLKRFSEARIRSSKLTTFVNFPLKDLDLREF------ASQSCNHAVYNLYAVS 567
Query: 469 VHDGKPEGGFYRVFVQRKSEELW 491
H G GG Y + + W
Sbjct: 568 NHSGTTMGGHYTAYCKSPVSSEW 590
>gi|384247322|gb|EIE20809.1| peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, partial
[Coccomyxa subellipsoidea C-169]
Length = 380
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 129/318 (40%), Gaps = 32/318 (10%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI--------PENYRHCKSPLVHRFGDLTRK 243
GL+N+ T F+N ++Q L PL FL P+N K L FG L +
Sbjct: 3 AGLSNLGNTCFMNSSVQCLAHAAPLVRVFLTGAYKRDLNPDNPLGNKGELAEAFGSLMKL 62
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W G VSP F +A + +F Q + E +++LL+ LH DL ++ +
Sbjct: 63 LWQGG--VGSVSPKGF-KAALARFAPQFGGYSQQDSQELLAFLLDGLHEDLNRVRQKPYV 119
Query: 304 IYECFQGELE--VVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+G + V E N ND G + + S PF+ L
Sbjct: 120 EEADAEGRPDKVVAAEAWDNYRKRNDSVVVDHFQGLYKSTLVCPQCSFSSVKFDPFMYLS 179
Query: 357 LDLPPP---PLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYM 413
L LP L+ ++ + P+ + + E VR A + + LP+ +
Sbjct: 180 LPLPSSKTRTLYITLIYAFLQPEQ--LDAADSWYCGRCKEHVR---AEKKLDLWSLPELL 234
Query: 414 ILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGK 473
++H++RF+ + +K V+FP+ L+L ++ + + YDL A H G
Sbjct: 235 VVHLKRFSYSRHSRDKLDAPVHFPLSALDLSSFL-----LREQDVAPVYDLYAVSNHFGG 289
Query: 474 PEGGFYRVFVQRKSEELW 491
GG Y + R ++ W
Sbjct: 290 LGGGHYTAYC-RMDDDGW 306
>gi|335776008|gb|AEH58762.1| ubiquitin carboxyl-terminal hydrolase 3-like protein [Equus
caballus]
Length = 413
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 132/331 (39%), Gaps = 61/331 (18%)
Query: 185 SLEDIRHVGLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYRHCKS- 231
S I GL N+ T F+N +QSL + LRN H +S
Sbjct: 100 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQ 159
Query: 232 -----PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWL 286
LV F +W + SP V K FR Q + EFM +L
Sbjct: 160 GDNNVSLVEEFRKTLCALWQGS--QTAFSPESLFYVVWKI-MPNFRGYQQQDAHEFMRYL 216
Query: 287 LNTLHSDLR---NTKKNTSIIYE----------CFQGELEVVKEIPKNTISGNDQNTEKG 333
L+ LH +L+ N ++I+ E C G VV I G QN
Sbjct: 217 LDHLHLELQGGFNGVSRSAILQENSTLSPSNKCCINGASTVVTAI----FGGILQNEVNC 272
Query: 334 SDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNII--PQVPLFNILKKF-DGE 389
G TE+ + PFL L LD+P F++ KN P L + L+ F D E
Sbjct: 273 LICG-------TESRKFDPFLDLSLDIPSQ--FRNKRSKNQENGPVCSLRDCLRSFTDLE 323
Query: 390 TV--TEVVRPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNL 441
+ TE+ H + + + + +LPK + LH++RF + K T V FP++ L
Sbjct: 324 ELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGL 383
Query: 442 ELKDYIPLPTPKENEKLRSKYDLIANIVHDG 472
++K Y L P+ + YDL A +VH G
Sbjct: 384 DMKCY--LLEPENSGPENCLYDLAAVVVHHG 412
>gi|3800762|gb|AAC68864.1| ubiquitin specific protease 52 [Gallus gallus]
Length = 465
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 133/327 (40%), Gaps = 50/327 (15%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L + R ++ L+ F L + +W
Sbjct: 127 TGLGNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNSRMRTALMSEFAKLIQLLW 186
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSD------------ 293
+ VSP EF + + + RF Q + EF+ +LL+ LH +
Sbjct: 187 TSSP-NHSVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHGEVNRVLVRPRANA 244
Query: 294 -----LRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETS 348
L + +K+ + + E V ++ + + +E G T+
Sbjct: 245 DTLDHLPDDEKSRQMWRRYQEREDSRVSDLFVAQLKSSLTCSECG----------YCSTA 294
Query: 349 RMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMR----Y 404
PF L L +P K E ++ + LF DG+ R AR R +
Sbjct: 295 FDPFWDLSLPIPK----KGYGEVTLMDCLRLFTKEDVLDGDEKPTCCRCK-ARTRCTKKF 349
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+ + PK ++LH++RF++ K T VNFP+K+L+L+++ + N + Y+L
Sbjct: 350 SIQKFPKILVLHLKRFSEARIRASKLTTFVNFPLKDLDLREFA---SQSCNHAV---YNL 403
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
A H G GG Y + + W
Sbjct: 404 YAVSNHSGATMGGHYTAYCKSPISSEW 430
>gi|395502639|ref|XP_003755686.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Sarcophilus
harrisii]
Length = 711
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 114/464 (24%), Positives = 165/464 (35%), Gaps = 124/464 (26%)
Query: 126 VSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAG----------------HHVYINLRT 169
V SN + + CL C + GR HA H +A H V ++ +
Sbjct: 222 VCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQIPLTNHKKTEKQEKVQHTVCMDCSS 281
Query: 170 EKVYCL-PDGYEINDPSLEDIRHV------------------------------------ 192
YC D + +ND L ++ V
Sbjct: 282 YSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHRKRKLLENSSLNSKLLKVN 341
Query: 193 ---------GLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYRHCKS 231
GL N+ T F+N +QSL + LRN H +S
Sbjct: 342 GSTTALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYHTRS 401
Query: 232 ------PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSW 285
LV F +W + SP V K FR Q + EFM +
Sbjct: 402 QGDNNVSLVEEFRKTLCALWQGS--QTAFSPESLFYVVWKIMPN-FRGYQQQDAHEFMRY 458
Query: 286 LLNTLHSDLR---NTKKNTSIIYE----------CFQGELEVVKEIPKNTISGNDQNTEK 332
LL+ LH +L+ N + I+ E C G VV I G QN
Sbjct: 459 LLDHLHLELQGGFNGVSRSVILQENSSLSASNKCCINGASTVVTAI----FGGILQNEVN 514
Query: 333 GSDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNI--IPQVPLFNILKKF-DG 388
G TE+ + PFL L LD+P F++ KN P L + L+ F D
Sbjct: 515 CLICG-------TESRKFDPFLDLSLDIPSQ--FRNKRSKNQENGPLCSLRDCLRSFTDL 565
Query: 389 ETV--TEVVRPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKN 440
E + TE+ H + + + + +LPK + LH++RF + K T V FP++
Sbjct: 566 EELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRG 625
Query: 441 LELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
L++K Y L P+ + YDL A +VH G G G Y +
Sbjct: 626 LDMKCY--LLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYA 667
>gi|444514644|gb|ELV10629.1| Putative ubiquitin carboxyl-terminal hydrolase 50 [Tupaia
chinensis]
Length = 373
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 129/317 (40%), Gaps = 44/317 (13%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPENYRHCKSPLVHRFGDLTRKIWHA 247
GL N+ T ++N +Q L ++PL +FL + + C S + F L +W
Sbjct: 44 TGLRNLGNTCYMNAILQCLCSISPLVEYFLSGKYMTALQKDC-SEVATAFAYLMTDMWLG 102
Query: 248 RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYEC 307
+ VSP E ++ + F Q + EF+ ++LN LH L+ + S
Sbjct: 103 DS--DCVSP-EIFRSALGNLYPEFMKKTQQDAQEFLIYVLNELHEALKTYHRKRSY---- 155
Query: 308 FQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMP-----FLMLGLDLPPP 362
E ++ + I+ + +G +D + + F +L L +P
Sbjct: 156 ---EKRSTQQCCRKVIASETSIITQLFEGQLRYDIVCLKCDNCAHKNEVFSILSLPIPSD 212
Query: 363 PLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVA--------RMRYRVTRLPKYMI 414
E ++ + F F +T+T + H + +R +++ PK +I
Sbjct: 213 ------YECSLQDCLQCF-----FQQDTLTWNNQMHCSLCDTMQETAVRASISKAPKVVI 261
Query: 415 LHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKP 474
H++RF K T +++P+ NL+L YI P +++ KY L A + H G
Sbjct: 262 FHLKRFDIQGMTKRKLRTDIHYPLTNLDLTPYI-CPVARKHP----KYSLCAVVNHFGDL 316
Query: 475 EGGFYRVFVQRKSEELW 491
+GG Y F + + W
Sbjct: 317 DGGHYTAFCKNSVTQAW 333
>gi|336381480|gb|EGO22632.1| hypothetical protein SERLADRAFT_372069 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1030
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 142/336 (42%), Gaps = 50/336 (14%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRKI 244
GL N+ T ++N TIQ L P FF N K L F ++ ++
Sbjct: 669 GLKNLGNTCYMNSTIQCLSATVPFARFFTDGRWKNAVNMLNPLGTKGNLALAFSNILYEM 728
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSII 304
H+ ++P+ F +++ + + F Q + EF+S+LL+ LH DL +
Sbjct: 729 AHSE--LPHLTPNAFRRSICSHAPQ-FSGSEQHDSQEFLSFLLDGLHEDLNRVLQKPH-- 783
Query: 305 YECFQGELEVVKEIPKNTISGNDQNTEKGSDGG-----------DDHDNIT---TETSRM 350
YE ++++P+ S + N + + + + +T T T+
Sbjct: 784 YEVTPEREAELEKLPQQIASQQEWNLYRMRNDSLVVDYFQGQFRNRMECLTCHKTSTTYN 843
Query: 351 PFLMLGLDLPPPPLFKDVMEKNIIPQVPLF---NILKKFDGETVTEVVRPHVARMRYRVT 407
F+ L L P P+ + + ++ + F IL+ D A R ++
Sbjct: 844 TFMYLTL---PIPIVRGSSKVSLQSCLDAFVKEEILENTDAWHCPNCKALRKATKRLSLS 900
Query: 408 RLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTP--------------K 453
RLP +++H++RF+ F +K T+V+FP++ L+L +Y+P P P
Sbjct: 901 RLPPILLIHLKRFSFKGPFTDKIETVVDFPLRTLDLTNYMPPPLPPGMDKGNMNGANLST 960
Query: 454 ENEKLRS---KYDLIANIVHDGKPEGGFYRVFVQRK 486
E+ ++++ KYDL H G GG Y F+ +
Sbjct: 961 EDPRMQTPPYKYDLYGVTNHFGTLSGGHYTAFIASR 996
>gi|449548362|gb|EMD39329.1| hypothetical protein CERSUDRAFT_64183 [Ceriporiopsis subvermispora B]
Length = 1166
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 135/336 (40%), Gaps = 44/336 (13%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRKI 244
GL N+ T ++N TIQ L P FF N K L H F + R++
Sbjct: 809 GLKNLGNTCYMNSTIQCLSATVPFTRFFTEGRWKNAVNMVNPLGTKGALAHAFASILREM 868
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT--KKNTS 302
W N ++P F ++V + + F Q + EF++ LL+ LH DL K +T
Sbjct: 869 WQGEN--QCLTPVTFRRSVCTYAPQ-FSGSEQHDSQEFLTSLLDGLHEDLNRVLHKPHTE 925
Query: 303 IIYECFQGELEVVKEIPKNTISGNDQNTEKGSDG--------GDDHDNI------TTETS 348
E + ELE +P S + + + G + + T T+
Sbjct: 926 PTPEQ-EAELE---RLPVQIASEREWQIYRMRNDSLVVDFFQGQFRNRLECLTCHKTSTT 981
Query: 349 RMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTR 408
F+ L L +P V + + +++K D A R ++R
Sbjct: 982 YNAFMYLTLPIPSTRSGSKVSLQQCLDAFVKEEVMEKSDAWNCPHCKTLRKATKRLSLSR 1041
Query: 409 LPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRS-------- 460
LP +++H++RF+ F +K T+V+FP++ L+L +Y+P P P S
Sbjct: 1042 LPPVLLIHLKRFSAKGPFTDKVETVVDFPLRGLDLTNYMPPPLPPGVGGGPSISRDDPRC 1101
Query: 461 -----KYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+YDL A H G GG Y F+ + L+
Sbjct: 1102 QMPPYRYDLYAVTNHFGTLSGGHYTAFISSRGGWLY 1137
>gi|10720326|sp|O57429.1|UBP2_CHICK RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=41 kDa ubiquitin-specific protease; AltName:
Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2
gi|2736064|gb|AAC13729.1| ubiquitin specific protease 41 [Gallus gallus]
Length = 357
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 137/324 (42%), Gaps = 44/324 (13%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L + R ++ L+ F L + +W
Sbjct: 19 TGLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNSRMRTALMSEFAKLIQLLW 78
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIY 305
+ VSP EF + + + RF Q + EF+ +LL+ LH ++ N ++
Sbjct: 79 TSSP-NDSVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHGEV-----NRVLVR 131
Query: 306 ECFQGELEVVKEIPKNTISGN------DQNTEKGSD--GGDDHDNITTE------TSRMP 351
+ + + +P + S ++ + SD G ++T T+ P
Sbjct: 132 P--RANADTLDHLPDDEKSRQMWRRYQEREDSRVSDLFVGQLKSSLTCSECGYCSTAFDP 189
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMR----YRVT 407
F L L +P K E ++ + LF DG+ R AR R + +
Sbjct: 190 FWDLSLPIPK----KGYGEVTLMDCLRLFTKEDVLDGDEKPTCCRCK-ARTRCTKKFSIQ 244
Query: 408 RLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIAN 467
+ PK ++LH++RF++ K T VNFP+K+L+L+++ + N + Y+L A
Sbjct: 245 KFPKILVLHLKRFSEARIRASKLTTFVNFPLKDLDLREF---ASQSCNHAV---YNLYAV 298
Query: 468 IVHDGKPEGGFYRVFVQRKSEELW 491
H G GG Y + + W
Sbjct: 299 SNHSGTTMGGHYTAYCKSPISSEW 322
>gi|159488883|ref|XP_001702430.1| predicted protein [Chlamydomonas reinhardtii]
gi|158271098|gb|EDO96925.1| predicted protein [Chlamydomonas reinhardtii]
Length = 347
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 126/333 (37%), Gaps = 74/333 (22%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP--------ENYRHCKSPLVHRFGDLTRK 243
GL+N+ T F+N ++Q L PL FL N K L FG L ++
Sbjct: 3 AGLSNLGNTCFMNSSLQCLAHAVPLMQAFLGGTYIKDLNRTNPLGMKGELAEAFGMLLQQ 62
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK----- 298
+W R VSP F +A + +F Q + EF+++LL+ LH D K
Sbjct: 63 LW--RGGVSSVSPRSF-KAKIGRFAPQFSGYAQHDSQEFLAFLLDGLHEDTNRIKTKPYF 119
Query: 299 -----------------------KNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSD 335
+N S++ + FQG L+ + PK
Sbjct: 120 ETKDEPGRPDEELATEAWSQYRARNNSLVVDHFQGLLKSGLDCPKCA------------- 166
Query: 336 GGDDHDNITTETSRMPFLMLGLDLPP----PPLFKDVMEKNIIPQVPLFNILKKFDGETV 391
+ ++ + PF+ L L LP P +D M + P+ L + D
Sbjct: 167 ----YHSVKFD----PFMYLSLPLPESRRRPVALEDCMRVFLQPER-----LDESDAWYC 213
Query: 392 TEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPT 451
A + + LP+ +++H++RF+ + K T V+FP+ L+L Y+
Sbjct: 214 PRCKEHVCADKKLDLWSLPEVLVVHLKRFSYTRYSRNKLDTRVDFPLHGLDLGSYV---- 269
Query: 452 PKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQ 484
+ + YD A H G GG Y + +
Sbjct: 270 -LRAQGVAPLYDCFAVSNHFGSMGGGHYTAYAK 301
>gi|403414636|emb|CCM01336.1| predicted protein [Fibroporia radiculosa]
Length = 1176
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 138/344 (40%), Gaps = 60/344 (17%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFF--------LIPENYRHCKSPLVHRFGDLTRKI 244
GL N+ T ++N TIQ L P FF + N K L H F ++ R +
Sbjct: 819 GLKNLGNTCYMNSTIQCLSATVPFARFFTDGRWKSAVNMMNPMGTKGNLAHAFANILRDM 878
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSII 304
W +SP F +++ + + + F Q + EF+++LL+ LH DL + I
Sbjct: 879 WQGE--LQCLSPVTFRRSLCQYAPQ-FGGTEQHDSQEFLNFLLDGLHEDLNRVLQKPQID 935
Query: 305 YEC-FQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNIT--------------TETSR 349
+ ELE +P S + + + D T T+
Sbjct: 936 STPEREAELE---RLPTQIASEQEWQIWRMRNDSLVVDFFQGQFRNRLECLTCHKTSTTY 992
Query: 350 MPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVR----PHVARMR-- 403
F+ L L +P + +V L + L F E V E PH +R
Sbjct: 993 NTFMYLTLPIP---------TSRSLSKVSLSHCLDAFVKEEVMEKSDAWNCPHCKTLRKA 1043
Query: 404 ---YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLP---------- 450
++RLP +++H++RF+ F +K T V++P++ L+L +Y+P P
Sbjct: 1044 TKNLSLSRLPPVLLIHLKRFSSKGHFTDKIETFVDYPLRGLDLTNYMPPPLPPGVNAGPQ 1103
Query: 451 TPKENEKLR---SKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
P+++ + + +YDL H G G Y F+ + L+
Sbjct: 1104 MPRDDPRAQIPPYRYDLYGVTNHFGTLSSGHYTAFISSRGGWLY 1147
>gi|442748253|gb|JAA66286.1| Putative ubiquitin specific peptidase 2 [Ixodes ricinus]
Length = 373
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 120/312 (38%), Gaps = 43/312 (13%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRKI 244
+GL N+ T F+N +Q L PL + L I + L F L + I
Sbjct: 34 LGLRNLGNTCFMNSIVQCLAHTRPLLEYCLKDCYTSEINNITSSNRGALFEAFATLMKSI 93
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSI 303
W + N + +SP F + K + RF Q + EF+ +LL LH D+ R T + +
Sbjct: 94 WRSSNGEYAISPQAFRSQIQKFA-PRFMGYSQQDSQEFLHYLLQGLHEDINRITSRPRHV 152
Query: 304 IYEC------FQGELEVVKEIPK-------NTISGNDQNTEKGSDGGDDHDNITTETSRM 350
E Q E K + + T K S G H ++T +
Sbjct: 153 TTEIDDNLSDSQKAAEAWKRYLRFDDSKIVDCFVXXXXXTLKCSVCG--HKSVTFD---- 206
Query: 351 PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---TVTEVVRPHVARMRYRVT 407
PF L L +P K I + LF + DG+ T + + +
Sbjct: 207 PFWDLSLPIP-----KSSDSVTIQQCLSLFTKEEVLDGDEKPTCSNCETRQRCTKSFTIH 261
Query: 408 RLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIAN 467
R PK ++LH++RF+ F K T V FP+ NL+L Y+ + Y+L A
Sbjct: 262 RCPKILVLHLKRFSPGERFRAKLNTRVEFPLTNLDLCPYM-------SNSHYVMYNLYAV 314
Query: 468 IVHDGKPEGGFY 479
H G G Y
Sbjct: 315 SNHSGSTYSGHY 326
>gi|149692387|ref|XP_001501949.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Equus caballus]
Length = 373
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 132/318 (41%), Gaps = 46/318 (14%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPENYRHCKSPLVHRFGDLTRKIWHA 247
GL N+ T ++N +Q L ++PL +FL I + C S + F + +W
Sbjct: 44 TGLRNLGNTCYMNAILQCLCSISPLVEYFLSGKYITALQKDC-SEVATAFAYVMTDMWLG 102
Query: 248 RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYEC 307
+ VSP E ++ + F Q + EF+ ++LN LH L+ + S C
Sbjct: 103 DS--DCVSP-EIFRSALGNLYPAFMKKTQQDAQEFLIYVLNELHEALKKYHRRRS----C 155
Query: 308 FQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHD--NITTETSRMP---FLMLGLDLPPP 362
+G V + I+ + +G ++ +T E F +L L +P
Sbjct: 156 EKGS---VPRCCRKAIANETSIITRLFEGQLNYSVTCLTCENCTYKNEVFTVLSLPIPSE 212
Query: 363 PLFKDVMEKNIIPQVPLFNILKKF-DGETVTEVVRPHVA--------RMRYRVTRLPKYM 413
Q L + L+ F +T+T R H + +R +++ PK +
Sbjct: 213 A------------QCSLQDCLQCFFQQDTLTWNNRIHCSFCETKQETAVRASISKAPKTV 260
Query: 414 ILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGK 473
I H++RF K T +++P+ NL+L YI P +++ SKY+L A + H G
Sbjct: 261 IFHLKRFDILGTMKRKLRTNIHYPLTNLDLTPYI-CPIFRKH----SKYNLCAVVNHFGD 315
Query: 474 PEGGFYRVFVQRKSEELW 491
+GG Y F + W
Sbjct: 316 LDGGHYTAFCKNSVTHAW 333
>gi|327290078|ref|XP_003229751.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 2-like, partial [Anolis carolinensis]
Length = 666
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 130/330 (39%), Gaps = 55/330 (16%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE------NYRHCKSPLVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L + N + L+ F L + +W
Sbjct: 327 TGLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYVRDLNNNSRMQMNLMAEFAKLIQALW 386
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIY 305
+ + VSP EF + + + RF Q + EF+ +LL+ LHS++ I+
Sbjct: 387 TS-SPNESVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHSEVNR------ILV 438
Query: 306 ECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLG--------- 356
G + + +P + EKG + + E SR+ L +G
Sbjct: 439 RPKGGSSDSLDHLP---------DEEKGRQMWMRY--LAREDSRIGDLFVGQLKSSLTCS 487
Query: 357 ------------LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---TVTEVVRPHVAR 401
DL P K E N+ + LF DG+ T
Sbjct: 488 VCGHCSTAFDPFWDLSLPIAKKSYGEVNLADCLRLFTKEDILDGDEKPTCCHCKARTKCT 547
Query: 402 MRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSK 461
++ + R PK ++LH++RF++ K T VNFP+K+L+L+++ +
Sbjct: 548 KKFSIQRFPKILVLHLKRFSEARIRSSKLTTFVNFPLKDLDLREF------ASQSCNHAV 601
Query: 462 YDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+L A H G GG Y + + W
Sbjct: 602 YNLYAVSNHSGTTMGGHYTAYCKNPVSGEW 631
>gi|148238088|ref|NP_001090549.1| ubiquitin thiolesterase 3 [Xenopus laevis]
gi|117558253|gb|AAI26024.1| LOC100036785 protein [Xenopus laevis]
Length = 522
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 110/466 (23%), Positives = 161/466 (34%), Gaps = 122/466 (26%)
Query: 124 CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAG------------------HHVYI 165
CSV SN + + CL C + GR HA H +A H V +
Sbjct: 29 CSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQAPLSSHKRQEKTEKERTQHTVCM 88
Query: 166 NLRTEKVYCL-PDGYEINDPSLEDIRHV-------------------------------- 192
+ + YC D + +ND L I+ V
Sbjct: 89 DCSSYSTYCYRCDDFVVNDTKLCLIQKVREHLQNLENSAFTAERHRKRKFLESASLSKKL 148
Query: 193 -------------GLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYR 227
GL N+ T F+N +QSL + LRN
Sbjct: 149 LKVNGSTTALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTY 208
Query: 228 HCKS------PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVE 281
H +S LV F +W + SP V K FR Q + E
Sbjct: 209 HTRSQGDVNVSLVEEFRKTLCALWQGN--QTAFSPESLFYVVWKI-MPNFRGYQQQDAHE 265
Query: 282 FMSWLLNTLHSDLRN----------TKKNTSIIYE---CFQGELEVVKEIPKNTISGNDQ 328
FM +LL+ LH +L+ ++ N S C G VV + G Q
Sbjct: 266 FMRYLLDHLHLELQGEFDGSSHSVLSQANCSRSVSNKCCINGASTVVTSV----FGGVLQ 321
Query: 329 NTEKGSDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF- 386
N G TE+ + PFL L LD+P K + P L + L+ F
Sbjct: 322 NEVNCLICG-------TESRKFDPFLDLSLDIPSQFRNKRCKNQENGPTCTLRDCLRSFT 374
Query: 387 DGETVTEV--------VRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPV 438
D E + E + + ++ + +LPK + LH++RF + K T V+FP+
Sbjct: 375 DLEELDETELYTCLKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVDFPL 434
Query: 439 KNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
+ L++K ++ P E YDL A +VH G G G Y +
Sbjct: 435 RGLDMKSFLLEPENIGPESCL--YDLEAVVVHHGSGVGSGHYTAYA 478
>gi|426244688|ref|XP_004016152.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 1 [Ovis
aries]
gi|426244690|ref|XP_004016153.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 2 [Ovis
aries]
Length = 606
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 134/328 (40%), Gaps = 52/328 (15%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R + L+ F L + IW
Sbjct: 268 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLSHSSRAHTALMEEFAKLIQTIW 327
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT----KKNT 301
+ + VSP EF + + + RF Q + EF+ +LL+ LH+++ K NT
Sbjct: 328 TS-SPNDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHNEVNRVTARPKSNT 385
Query: 302 SII---------YECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPF 352
+ + ++ LE + G +++ +D G T PF
Sbjct: 386 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCG------YCSTVFDPF 439
Query: 353 LMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEV-VRPHVARMRYR------ 405
L L + K P+V L + ++ F E V + +P R R
Sbjct: 440 WDLSLPI----------TKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCHCRARKRCIKK 489
Query: 406 --VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYD 463
+ R PK ++LH++RF+++ K VNFP+++L+L+++ EN + Y+
Sbjct: 490 FSIQRFPKILVLHLKRFSESRIRTSKLTAFVNFPLRDLDLREFA-----SENTN-HAVYN 543
Query: 464 LIANIVHDGKPEGGFYRVFVQRKSEELW 491
L A H G GG Y + + W
Sbjct: 544 LYAVSNHSGTTMGGHYTAYCRSPVTGEW 571
>gi|395822175|ref|XP_003784399.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Otolemur garnettii]
Length = 375
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 127/312 (40%), Gaps = 36/312 (11%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPENYRHCKSPLVHRFGDLTRKIWHAR 248
GL N+ T ++N +Q L ++PL +FL + + C S + F L +W
Sbjct: 47 GLRNLGNTCYMNAILQCLCSISPLVEYFLSGKYMTALQKDC-SEVATAFAYLMTDMWLGD 105
Query: 249 NFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECF 308
+ VSP E ++ + F Q + EF+ ++LN LH L+ + S
Sbjct: 106 S--DCVSP-EIFRSALGNLYPAFMKKTQQDAQEFLIYVLNELHEALKKYHRRRSY----- 157
Query: 309 QGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPF---LMLGLDLPPPPLF 365
E ++ + I+ + +G ++ + + + + L LP P +
Sbjct: 158 --EKRSIQRCCRKVIANETSIITRLFEGQLNYSIVCLKCENCTYRNEVFTVLSLPIPCEY 215
Query: 366 KDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVAR------MRYRVTRLPKYMILHMRR 419
+ ++ + + D T +R +R +++ PK ++ H++R
Sbjct: 216 ECSLQDCL-------QCFFQQDTLTWNNQIRCAFCETNQETAVRASISKAPKIIVFHLKR 268
Query: 420 FTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFY 479
F K T +++P+ NL+L YI P +++ KY+L A + H G +GG Y
Sbjct: 269 FDIQGMMKRKLRTNIHYPLTNLDLTSYI-CPIFRKHP----KYNLCAVVNHFGDLDGGHY 323
Query: 480 RVFVQRKSEELW 491
F + + W
Sbjct: 324 TAFCKNSVTQAW 335
>gi|354504737|ref|XP_003514430.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 4
[Cricetulus griseus]
Length = 396
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 133/322 (41%), Gaps = 40/322 (12%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R + + L+ F L + IW
Sbjct: 58 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSNAHTALMEEFAKLIQTIW 117
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-------RNTK 298
+ VSP EF + + + RF Q + EF+ +LL+ LH+++ + +
Sbjct: 118 TSSP-NDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKPSP 175
Query: 299 KNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLD 358
+N + + +G K + + D + D T PF L L
Sbjct: 176 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 235
Query: 359 LPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEV-VRPHVARMRYR--------VTRL 409
+ K P+V L + ++ F E V + +P R R R V R
Sbjct: 236 IA----------KRGYPEVTLMDCMRLFTKEDVLDGDEKPTCYRCRARKRCIKKFSVQRF 285
Query: 410 PKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIV 469
PK ++LH++RF+++ K T VNFP+++L+L+++ EN + Y+L A
Sbjct: 286 PKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREF-----ASENTN-HAVYNLYAVSN 339
Query: 470 HDGKPEGGFYRVFVQRKSEELW 491
H G GG Y + + W
Sbjct: 340 HSGTTMGGHYTAYCRSPVTGEW 361
>gi|336363428|gb|EGN91818.1| hypothetical protein SERLA73DRAFT_66796 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1114
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 146/344 (42%), Gaps = 64/344 (18%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRKI 244
GL N+ T ++N TIQ L P FF N K L F ++ ++
Sbjct: 751 GLKNLGNTCYMNSTIQCLSATVPFARFFTDGRWKNAVNMLNPLGTKGNLALAFSNILYEM 810
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSII 304
H+ ++P+ F +++ + + F Q + EF+S+LL+ LH DL +
Sbjct: 811 AHSE--LPHLTPNAFRRSICSHAPQ-FSGSEQHDSQEFLSFLLDGLHEDLNRVLQKPH-- 865
Query: 305 YECFQGELEVVKEIPKNTISGNDQNTEKGSDGG-----------DDHDNIT---TETSRM 350
YE ++++P+ S + N + + + + +T T T+
Sbjct: 866 YEVTPEREAELEKLPQQIASQQEWNLYRMRNDSLVVDYFQGQFRNRMECLTCHKTSTTYN 925
Query: 351 PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE------VVRPHV----- 399
F+ L L +P ++ + +V L + L F E + E V P+
Sbjct: 926 TFMYLTLPIP-------IVRGSS--KVSLQSCLDAFVKEEILENTDAWYVHCPNCKALRK 976
Query: 400 ARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTP------- 452
A R ++RLP +++H++RF+ F +K T+V+FP++ L+L +Y+P P P
Sbjct: 977 ATKRLSLSRLPPILLIHLKRFSFKGPFTDKIETVVDFPLRTLDLTNYMPPPLPPGMDKGN 1036
Query: 453 -------KENEKLRS---KYDLIANIVHDGKPEGGFYRVFVQRK 486
E+ ++++ KYDL H G GG Y F+ +
Sbjct: 1037 MNGANLSTEDPRMQTPPYKYDLYGVTNHFGTLSGGHYTAFIASR 1080
>gi|291403016|ref|XP_002717774.1| PREDICTED: Putative ubiquitin carboxyl-terminal hydrolase 50-like
[Oryctolagus cuniculus]
Length = 373
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 137/325 (42%), Gaps = 42/325 (12%)
Query: 182 NDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPENYRHCKSPLVHRF 237
N P + + GL N+ T ++N +Q L ++PL +FL I + C S + F
Sbjct: 36 NQPHFQGV--TGLRNLGNTCYMNAILQCLGSISPLVEYFLSGKYITALQKDC-SDVATAF 92
Query: 238 GDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT 297
L +W + VSP E ++ + F Q + EF+ ++LN LH L+
Sbjct: 93 AYLMTDMWLGDS--DCVSP-EIFRSALGNLYPAFMKKTQQDAQEFLIYVLNELHEALKKY 149
Query: 298 KKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPF---LM 354
+ S YE +G + + I+ + +G ++ I + + +
Sbjct: 150 HRRRS--YE--KGS---TQRCCRKAIANETSIITQLFEGQLNYGIICLKCENCTYRNEVF 202
Query: 355 LGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVA--------RMRYRV 406
L LP P ++ ++ + F F +T+T + H + +R +
Sbjct: 203 TVLSLPIPSEYECSLQDCL----QCF-----FQQDTLTWNNQIHCSFCETKQETAVRASI 253
Query: 407 TRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIA 466
++ PK +I H++RF K T +++P+ NL+L YI P +++ KY+L A
Sbjct: 254 SKAPKIIIFHLKRFDIQGTVKRKLRTDIHYPLTNLDLTPYI-CPVFRKHP----KYNLCA 308
Query: 467 NIVHDGKPEGGFYRVFVQRKSEELW 491
+ H G +GG Y F + + W
Sbjct: 309 VVNHFGDLDGGHYTAFCKNSVTQAW 333
>gi|383855982|ref|XP_003703489.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Megachile
rotundata]
Length = 997
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 131/313 (41%), Gaps = 30/313 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFF--------LIPENYRHCKSPLVHRFGDLTRK 243
GL N+ + ++N IQ L T L +F L N + +V + +
Sbjct: 666 TGLKNLGNSCYMNSIIQCLSNTTHLAKYFMDNLYTDDLNTSNDNTTQGQVVQEVAQVIKA 725
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK---N 300
+W + +K +SP + L+ V+ K +F Q + EF+++LL+ +H+DL+ + K +
Sbjct: 726 LWRGQ-YKS-ISPLD-LKIVVGQYKLQFESYEQQDSHEFLTFLLDWMHNDLKKSCKVPSD 782
Query: 301 TSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLP 360
++ + + +E K I + G ++T S + T+ F L + LP
Sbjct: 783 LTVAEKAWDKAMESQKSIISDLFFGQLRSTITCSFCKQ------SSTTYETFNSLTMSLP 836
Query: 361 PP--PLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMR 418
D + K + Q K G + A ++ +L +++H+
Sbjct: 837 HANRCTLNDCILKFVSGQ--------KVIGWKCPKCQTSREATKKFDFVKLAPIIVIHLN 888
Query: 419 RFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGF 478
RF ++ ++EK T V+FP+ LK Y+ L + Y L A H G EGG
Sbjct: 889 RFAESGGWLEKRNTGVDFPLTGFNLKPYVVLDSNTIPNIRNYSYSLYAMSNHYGTMEGGH 948
Query: 479 YRVFVQRKSEELW 491
Y F + ++ W
Sbjct: 949 YTAFCKNAAQNKW 961
>gi|45382531|ref|NP_990257.1| ubiquitin carboxyl-terminal hydrolase 2 [Gallus gallus]
gi|3800760|gb|AAC68863.1| ubiquitin specific protease 46 [Gallus gallus]
Length = 403
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 130/323 (40%), Gaps = 42/323 (13%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDLTRKIW 245
GL N+ T ++N +Q L LR++ L + R ++ + F L + W
Sbjct: 19 TGLRNLGNTCYMNSILQCLSNTKELRDYCLQNQYLRDFNNNSRMRTAFMSEFAKLIQLFW 78
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSD----LRNTKKNT 301
+ VSP EF + + + RF Q + EF+ +LL+ LH + L + N
Sbjct: 79 TSSP-NDSVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHGEVNRVLVRPRANA 136
Query: 302 SII---------YECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPF 352
+ + ++ E + G +++ S+ G T+ PF
Sbjct: 137 DTLDHFPDDEKSRQMWRRYQEREDSPVSDFFLGQLKSSLTSSECG------YCSTAFDPF 190
Query: 353 LMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMR----YRVTR 408
L L +P K E ++ +PLF DG+ R AR R + + +
Sbjct: 191 WDLSLPIPK----KGYGEVTLMHCLPLFTKEDLLDGDEKPTCCRCK-ARTRCTKKFSIQK 245
Query: 409 LPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANI 468
PK ++LH++RF++ K T V+FP+K+L+L+++ + Y L
Sbjct: 246 FPKILLLHLKRFSEARIRASKLTTFVDFPLKDLDLREFA------SQSCNHAVYKLYGVS 299
Query: 469 VHDGKPEGGFYRVFVQRKSEELW 491
H G GG Y ++R S W
Sbjct: 300 NHSGTTMGGHYHCLLKRPSPAEW 322
>gi|70926345|ref|XP_735726.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56509642|emb|CAH88845.1| hypothetical protein PC000558.00.0 [Plasmodium chabaudi chabaudi]
Length = 115
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 59/110 (53%), Gaps = 24/110 (21%)
Query: 47 DDDD---------EEEEYGGRGDSGAKVGQNGRTGEDDD-EDKDE--------DEDDLAN 88
DDDD E+ + ++ AK N R D++ DK+E +E+D N
Sbjct: 12 DDDDGVVPKRRKNEKNKNSSETETNAKNNLNKREQIDNNINDKNESYNKTTKNNENDSIN 71
Query: 89 GYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLV 138
+ R+ CPYL T+NR +LDFDFEK CS+SLSNL+VYACLV
Sbjct: 72 NTSDNNKIRV------CPYLRTINRNLLDFDFEKLCSISLSNLHVYACLV 115
>gi|291413016|ref|XP_002722763.1| PREDICTED: ubiquitin specific peptidase 2 [Oryctolagus cuniculus]
Length = 607
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 133/322 (41%), Gaps = 40/322 (12%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R + + L+ F L + IW
Sbjct: 269 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSNAHTALMEEFAKLIQTIW 328
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-------RNTK 298
+ + VSP EF + + + RF Q + EF+ +LL+ LH+++ ++
Sbjct: 329 TS-SPNDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHNEVNRVTARPKSNP 386
Query: 299 KNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLD 358
+N + + +G K + + D + D T PF L L
Sbjct: 387 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 446
Query: 359 LPPPPLFKDVMEKNIIPQVPLFNILKKF------DGE---TVTEVVRPHVARMRYRVTRL 409
+ K P+V L + ++ F DGE T ++ + R
Sbjct: 447 I----------AKRGYPEVTLMDCMRLFTKEDVLDGEEKPTCCRCRARKRCIKKFSIQRF 496
Query: 410 PKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIV 469
PK ++LH++RF+++ K T VNFP+++L+L+++ EN + Y+L A
Sbjct: 497 PKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFA-----SENTN-HAVYNLYAVSN 550
Query: 470 HDGKPEGGFYRVFVQRKSEELW 491
H G GG Y + + + W
Sbjct: 551 HSGTTMGGHYTAYCRSPATGEW 572
>gi|30584279|gb|AAP36388.1| Homo sapiens ubiquitin specific protease 2 [synthetic construct]
gi|60652721|gb|AAX29055.1| ubiquitin specific protease 2 [synthetic construct]
Length = 606
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 130/322 (40%), Gaps = 40/322 (12%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R + + LV F L + IW
Sbjct: 267 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIW 326
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-------RNTK 298
+ + VSP EF + + + RF Q + EF+ +LL+ LH+++ ++
Sbjct: 327 TS-SPNDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 384
Query: 299 KNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLD 358
+N + + +G K + + D + D T PF L L
Sbjct: 385 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 444
Query: 359 LPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---------TVTEVVRPHVARMRYRVTRL 409
+ K P+V L + ++ F E T ++ + R
Sbjct: 445 I----------AKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRF 494
Query: 410 PKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIV 469
PK ++LH++RF+++ K T VNFP+++L+L+++ EN + Y+L A
Sbjct: 495 PKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFA-----SENTN-HAVYNLYAVSN 548
Query: 470 HDGKPEGGFYRVFVQRKSEELW 491
H G GG Y + + W
Sbjct: 549 HSGTTMGGHYTAYCRSPGTGEW 570
>gi|188528692|ref|NP_004196.4| ubiquitin carboxyl-terminal hydrolase 2 isoform a [Homo sapiens]
gi|20141855|sp|O75604.2|UBP2_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=41 kDa ubiquitin-specific protease; AltName:
Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2
gi|12804005|gb|AAH02854.1| Ubiquitin specific peptidase 2 [Homo sapiens]
gi|12804195|gb|AAH02955.1| Ubiquitin specific peptidase 2 [Homo sapiens]
gi|119587889|gb|EAW67485.1| ubiquitin specific peptidase 2, isoform CRA_b [Homo sapiens]
gi|123983451|gb|ABM83458.1| ubiquitin specific peptidase 2 [synthetic construct]
gi|167887743|gb|ACA06097.1| ubiquitin carboxyl-terminal hydrolase 2 variant 1 [Homo sapiens]
Length = 605
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 130/322 (40%), Gaps = 40/322 (12%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R + + LV F L + IW
Sbjct: 267 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIW 326
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-------RNTK 298
+ + VSP EF + + + RF Q + EF+ +LL+ LH+++ ++
Sbjct: 327 TS-SPNDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 384
Query: 299 KNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLD 358
+N + + +G K + + D + D T PF L L
Sbjct: 385 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 444
Query: 359 LPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---------TVTEVVRPHVARMRYRVTRL 409
+ K P+V L + ++ F E T ++ + R
Sbjct: 445 I----------AKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRF 494
Query: 410 PKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIV 469
PK ++LH++RF+++ K T VNFP+++L+L+++ EN + Y+L A
Sbjct: 495 PKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFA-----SENTN-HAVYNLYAVSN 548
Query: 470 HDGKPEGGFYRVFVQRKSEELW 491
H G GG Y + + W
Sbjct: 549 HSGTTMGGHYTAYCRSPGTGEW 570
>gi|340508522|gb|EGR34211.1| ubiquitin specific peptidase 8, putative [Ichthyophthirius
multifiliis]
Length = 547
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 138/335 (41%), Gaps = 42/335 (12%)
Query: 182 NDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLI--------PENYRHCKSPL 233
N +L+ VGL N+ T ++N +Q L PL ++FL P + +
Sbjct: 71 NSQNLQIYGLVGLYNLGNTCYINAALQCLSNTPPLCDYFLSQLHEKEINPNAFLGSNGQI 130
Query: 234 VHRFGDLTRKIWHA-RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHS 292
+FG L +W +NF + P +F+ + + + ++F G Q + EF+++LL+ LH
Sbjct: 131 TSQFGKLILDLWQTDQNF---IEPIDFINEIGQFA-EQFADGTQQDSHEFLAFLLDILHE 186
Query: 293 DLR-------------NTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDD 339
DL N +K+ E ++ L K I + G ++T K G
Sbjct: 187 DLNRVIKKPYIKEKDYNCEKHEEYSKESWKEYLMRNKSIIVDLFQGQTKSTLKCLVCG-- 244
Query: 340 HDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHV 399
+ F L + +P +++ N+ + F + D +
Sbjct: 245 ----SVSHKFEAFQFLSVPVPANKSHNEII--NLSECIQEFTKEEYLDQNEWWYCFKCKK 298
Query: 400 ARMRYR---VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENE 456
R + + +LP +I+H++RF + K V+FP++N +L+ P +
Sbjct: 299 NRKSTKQIDLWKLPNILIIHLKRFRFDKNIKAKIKNFVDFPIQNFDLQ-----PYTIGRQ 353
Query: 457 KLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+ + YDL A H+G G Y + + ++ + W
Sbjct: 354 RDQPIYDLFAISNHEGNLSSGHYTAYAKNRANQNW 388
>gi|123998135|gb|ABM86669.1| ubiquitin specific peptidase 2 [synthetic construct]
Length = 605
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 130/322 (40%), Gaps = 40/322 (12%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R + + LV F L + IW
Sbjct: 267 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIW 326
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-------RNTK 298
+ + VSP EF + + + RF Q + EF+ +LL+ LH+++ ++
Sbjct: 327 TS-SPNDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 384
Query: 299 KNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLD 358
+N + + +G K + + D + D T PF L L
Sbjct: 385 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 444
Query: 359 LPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---------TVTEVVRPHVARMRYRVTRL 409
+ K P+V L + ++ F E T ++ + R
Sbjct: 445 I----------AKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRF 494
Query: 410 PKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIV 469
PK ++LH++RF+++ K T VNFP+++L+L+++ EN + Y+L A
Sbjct: 495 PKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFA-----SENTN-HAVYNLYAVSN 548
Query: 470 HDGKPEGGFYRVFVQRKSEELW 491
H G GG Y + + W
Sbjct: 549 HSGTTMGGHYTAYCRSPGTGEW 570
>gi|392346694|ref|XP_003749615.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50
[Rattus norvegicus]
Length = 385
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 133/318 (41%), Gaps = 46/318 (14%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPENYRHCKSPLVHRFGDLTRKIWHA 247
GL N+ T ++N +Q L +PL +FL I + C S + F L +W
Sbjct: 40 TGLRNLGNTCYMNAILQCLCSTSPLVEYFLSGKYITALQKDC-SEVTTAFAYLMTDMWLG 98
Query: 248 RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL------RNTKKNT 301
+ VSP FL AV + F Q + EF+ ++LN LH L R ++K T
Sbjct: 99 DS--DCVSPEIFLSAV-GSLYPAFLKKTQQDAQEFLIYVLNELHEALKKHCRGRASEKRT 155
Query: 302 SIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPP 361
+ +++P + S + E T T + + L LP
Sbjct: 156 A---------QNCCRKVPAHETSIITRLFEGQLSYSITCLKCETCTYKNEVFTI-LSLPI 205
Query: 362 PPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVA--------RMRYRVTRLPKYM 413
P ++ ++ + F F +T+T + H + +R +++ PK +
Sbjct: 206 PSEYECSLQDCL----QCF-----FQQDTLTWNNQIHCSFCEIKQETAVRTTISKAPKII 256
Query: 414 ILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGK 473
+LH++RF +K T +++P+ NL+L YI P +++ KY+L A + H G
Sbjct: 257 VLHLKRFDIQGAVKKKLRTDIHYPLTNLDLTPYI-CPVFRKHP----KYNLCAVVNHFGD 311
Query: 474 PEGGFYRVFVQRKSEELW 491
+GG Y F + + W
Sbjct: 312 LDGGHYTAFCKNSVTQAW 329
>gi|397498540|ref|XP_003820038.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Pan paniscus]
Length = 605
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 130/322 (40%), Gaps = 40/322 (12%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R + + LV F L + IW
Sbjct: 267 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIW 326
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-------RNTK 298
+ + VSP EF + + + RF Q + EF+ +LL+ LH+++ ++
Sbjct: 327 TS-SPNDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 384
Query: 299 KNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLD 358
+N + + +G K + + D + D T PF L L
Sbjct: 385 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 444
Query: 359 LPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---------TVTEVVRPHVARMRYRVTRL 409
+ K P+V L + ++ F E T ++ + R
Sbjct: 445 I----------AKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRF 494
Query: 410 PKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIV 469
PK ++LH++RF+++ K T VNFP+++L+L+++ EN + Y+L A
Sbjct: 495 PKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFA-----SENTN-HAVYNLYAVSN 548
Query: 470 HDGKPEGGFYRVFVQRKSEELW 491
H G GG Y + + W
Sbjct: 549 HSGTTMGGHYTAYCRSPGTGEW 570
>gi|432901665|ref|XP_004076886.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Oryzias
latipes]
Length = 401
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 133/329 (40%), Gaps = 56/329 (17%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL-----IPENYRHCKSPLVHRFGDLTRKIWH 246
VGL N+ T F+N +Q L + LR++ L + N R + L+ F LT+ +W
Sbjct: 59 VGLRNLGNTCFMNSILQCLSNTSELRDYCLRNVHRLDVNNRT-NAALMEEFAKLTQSLWT 117
Query: 247 ARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYE 306
+ N + +SP +F + + + K F Q + EF+ LL+ LH
Sbjct: 118 SVNIEA-ISPSDFRSEIQRVAPK-FVGCNQQDAQEFLRSLLDGLH--------------- 160
Query: 307 CFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLG---------- 356
E+ V P++++ D +++ + + E S++ L +G
Sbjct: 161 ---NEVNRVTVRPRSSVEDFDHYSDEEKSKRMWNLYLAREDSKVVDLFVGQLKSSLTCTV 217
Query: 357 -----------LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---TVTEVVRPHVARM 402
DL P + E + + LF DGE T +
Sbjct: 218 CGFRSTMFDPFWDLSIPIAQERPGEVTLKDCLRLFTKEDVLDGEEKPTCNKCKARRKCTK 277
Query: 403 RYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKY 462
R+ + + P+ +++H++RF+ +N K T VNFP+K L+L+++ + Y
Sbjct: 278 RFSIQKFPQILVIHLKRFSDSNSRSSKLSTFVNFPLKELDLREF------SADNSEHPVY 331
Query: 463 DLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+L A H G GG Y + + + W
Sbjct: 332 NLYAVSNHTGNTLGGHYTAYCRNPALGEW 360
>gi|125852016|ref|XP_692003.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like [Danio
rerio]
Length = 404
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 129/317 (40%), Gaps = 25/317 (7%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPENYRHCKSPLVHRFGDLTRKIWH 246
VGL N+ T F+N +Q L LR++ L + + + + + L+ F + +W
Sbjct: 61 QVGLRNVGNTCFLNAIVQCLSHTRSLRDYCLMRAYVQDKHSNQEPVLMDEFSKVLAGLWE 120
Query: 247 ARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSII- 304
+ V+P +F + V K S F Q + EF+ +LL+ LH+++ R K ++I
Sbjct: 121 CDAGETTVNPGKFYR-VFKESVPYFSGYSQQDAQEFLRFLLDRLHTEINRRPSKRPAVIE 179
Query: 305 -----YECFQGELEVVKEIPKNTISGNDQNTE--KGSDGGDDHDNITTETSRMPFLMLGL 357
Y F+ E ++ + + + G H ++ + S + L
Sbjct: 180 RKEPAYTRFRISEEAFAMWQRHLDRDDSKIVDLFSGQLRSSLHCSVCSHYSNTFDVFCDL 239
Query: 358 DLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---TVTEVVRPHVARMRYRVTRLPKYMI 414
LP P + + LF+ +K D E R + R + R P+ ++
Sbjct: 240 SLPIPKKSDYGRAVTLRECLDLFSQEEKLDKENSPMCERCNRRTESTKRLTIQRFPRVLV 299
Query: 415 LHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKP 474
+H+ RF + F + K+ V+FP+ L+L + P+ YDL A H G
Sbjct: 300 IHLNRFAMSRFSISKSTVPVSFPLTALDLGLFGPVDCGP------VLYDLYAVCNHSGTV 353
Query: 475 EGGFYRVFVQRKSEELW 491
G Y + EE W
Sbjct: 354 NMGHYTAAC--REEEGW 368
>gi|114640783|ref|XP_001166112.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 5 [Pan
troglodytes]
Length = 605
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 130/322 (40%), Gaps = 40/322 (12%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R + + LV F L + IW
Sbjct: 267 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIW 326
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-------RNTK 298
+ + VSP EF + + + RF Q + EF+ +LL+ LH+++ ++
Sbjct: 327 TS-SPNDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 384
Query: 299 KNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLD 358
+N + + +G K + + D + D T PF L L
Sbjct: 385 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 444
Query: 359 LPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---------TVTEVVRPHVARMRYRVTRL 409
+ K P+V L + ++ F E T ++ + R
Sbjct: 445 I----------AKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRF 494
Query: 410 PKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIV 469
PK ++LH++RF+++ K T VNFP+++L+L+++ EN + Y+L A
Sbjct: 495 PKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFA-----SENTN-HAVYNLYAVSN 548
Query: 470 HDGKPEGGFYRVFVQRKSEELW 491
H G GG Y + + W
Sbjct: 549 HSGTTMGGHYTAYCRSPGTGEW 570
>gi|55742515|ref|NP_001006783.1| ubiquitin thiolesterase 3 [Xenopus (Silurana) tropicalis]
gi|49523089|gb|AAH75590.1| ubiquitin specific peptidase 3 [Xenopus (Silurana) tropicalis]
Length = 467
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 129/336 (38%), Gaps = 56/336 (16%)
Query: 192 VGLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYRHCKS------PL 233
GL N+ T F+N +QSL + LRN H +S L
Sbjct: 106 TGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDVNVSL 165
Query: 234 VHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSD 293
V F +W + SP V K FR Q + EFM +LL+ LH +
Sbjct: 166 VEEFRKTLCALWQGN--QTAFSPESLFYVVWKIMPN-FRGYQQQDAHEFMRYLLDHLHLE 222
Query: 294 LRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSD-------GGDDHDNIT-- 344
L+ F G V + S +++ G+ GG + +
Sbjct: 223 LQGE----------FDGSSHSVLSQANCSRSASNKCCINGASTVVTSVFGGVLQNEVNCL 272
Query: 345 ---TETSRM-PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF-DGETVTEV----- 394
TE+ + PFL L LD+P K + P L + L+ F D E + E
Sbjct: 273 ICGTESRKFDPFLDLSLDIPSQFRNKRCKNQENGPTCTLRDCLRSFTDLEELDETELYTC 332
Query: 395 ---VRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPT 451
+ + ++ + +LPK + LH++RF + K T V+FP++ L++K ++ P
Sbjct: 333 LKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVDFPLRGLDMKSFLLEPE 392
Query: 452 PKENEKLRSKYDLIANIVHDGKPEG-GFYRVFVQRK 486
E YDL A +VH G G G Y + K
Sbjct: 393 NIGPES--CLYDLAAVVVHHGSGVGSGHYTAYATHK 426
>gi|403262562|ref|XP_003923645.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Saimiri
boliviensis boliviensis]
Length = 606
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 130/322 (40%), Gaps = 40/322 (12%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R + + LV F L + IW
Sbjct: 268 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYVRDLHHSSNAHTALVEEFAKLIQTIW 327
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-------RNTK 298
+ + VSP EF + + + RF Q + EF+ +LL+ LH+++ ++
Sbjct: 328 TS-SPNDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHNEVNRVAPRPKSNP 385
Query: 299 KNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLD 358
+N + + +G K + + D + D T PF L L
Sbjct: 386 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 445
Query: 359 LPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---------TVTEVVRPHVARMRYRVTRL 409
+ K P+V L + ++ F E T ++ + R
Sbjct: 446 I----------AKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRARKRCIKKFSIQRF 495
Query: 410 PKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIV 469
PK ++LH++RF+++ K T VNFP+++L+L+++ EN + Y+L A
Sbjct: 496 PKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFA-----SENTN-HAVYNLYAVSN 549
Query: 470 HDGKPEGGFYRVFVQRKSEELW 491
H G GG Y + + W
Sbjct: 550 HSGTTMGGHYTAYCRSPGTGEW 571
>gi|311264080|ref|XP_003129987.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 1
[Sus scrofa]
Length = 606
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 134/340 (39%), Gaps = 76/340 (22%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL---IPENYRHCKSP---LVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L + H S L+ F L + IW
Sbjct: 268 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSSAHTALMEEFAKLIQTIW 327
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIY 305
+ + VSP EF + + + RF Q + EF+ +LL+ LH+
Sbjct: 328 TS-SPNDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHN------------- 372
Query: 306 ECFQGELEVVKEIPKNTISGNDQ--NTEKGSDGGDDHDNITTETSRMPFLMLG------- 356
E+ V PK++ G D + EKG + + E SR+ L +G
Sbjct: 373 -----EVNRVTVRPKSSPEGLDHLPDDEKGRQMWRKY--LEREDSRIGDLFVGQLKSSLT 425
Query: 357 ----------------LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---------TV 391
L LP + K P+V L + ++ F E T
Sbjct: 426 CTDCGYCSTVFDPFWDLSLP--------IAKRGYPEVTLMDCMRLFTKEDVLDGDEKPTC 477
Query: 392 TEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPT 451
++ V R PK ++LH++RF+++ K T VNFP+++L+L+++
Sbjct: 478 CRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFA---- 533
Query: 452 PKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
EN + Y+L A H G GG Y + + W
Sbjct: 534 -SENIN-HAVYNLYAVSNHSGTTMGGHYTAYCRSPVTGEW 571
>gi|70923767|ref|XP_734840.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56507951|emb|CAH86191.1| hypothetical protein PC301887.00.0 [Plasmodium chabaudi chabaudi]
Length = 164
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 43/59 (72%)
Query: 233 LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH 291
L+ +L +KI++ +NFKG VSPHEFLQAV SKK F+IG +++P+ F W++N +H
Sbjct: 5 LIVVLAELLKKIYNPKNFKGVVSPHEFLQAVGIESKKNFKIGTKNDPLNFFLWIINKIH 63
>gi|340717430|ref|XP_003397185.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Bombus
terrestris]
Length = 996
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 134/317 (42%), Gaps = 34/317 (10%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL--------IPENYRHCKSPLVHRFGDLTRK 243
GL N+ + ++N IQ L T L +F+ N + + +V + +
Sbjct: 661 TGLKNLGNSCYMNSIIQCLSNTTHLAKYFMDNLYADDLNTNNDNNTQGQVVEEVAQVIKA 720
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK---N 300
+W + +K +SPH+ AV + K +F Q + EF+++LL+ +H+DL+ K
Sbjct: 721 LWRGQ-YKS-ISPHDLKIAVGQY-KLQFESYEQQDSHEFLTFLLDWMHNDLKKNCKVPLE 777
Query: 301 TSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLP 360
++ + + ++ K I + G ++T S + T+ F L + LP
Sbjct: 778 MTVAEKAWDKAMDSQKSIISDLFFGQLRSTITCSFCKQ------SSTTYEIFNSLTMSLP 831
Query: 361 PP--PLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMR 418
D + K + Q K G + P A ++ +L +++H+
Sbjct: 832 HANRCTLNDCILKFVSGQ--------KVIGWKCPKCQTPREATKKFDFVKLAPIIVIHLN 883
Query: 419 RFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKEN-EKLRS---KYDLIANIVHDGKP 474
RF ++ ++EK T V+FP+ + LK Y+ + +RS Y L A H G
Sbjct: 884 RFAESGGWLEKRNTAVDFPLTDFNLKPYLVADSSSATISNIRSYNYSYSLYAMSNHYGTM 943
Query: 475 EGGFYRVFVQRKSEELW 491
EGG Y F + ++ W
Sbjct: 944 EGGHYTAFCKNATQNKW 960
>gi|449460062|ref|XP_004147765.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like [Cucumis
sativus]
gi|449519156|ref|XP_004166601.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like [Cucumis
sativus]
Length = 646
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 136/307 (44%), Gaps = 33/307 (10%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHC--KSPLVHR-----FGDLTRKI 244
+GL N+ T ++N +Q L PL NF L ++ C S R F L R+I
Sbjct: 24 LGLKNLGNTCYLNSVLQCLTYTPPLANFCLRNQHSSLCDFASSDADRKRECPFCILERRI 83
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSD---LRNTKKNT 301
+ + + +Q+ ++ + FR+G Q + EF+ ++++ H+ L+ ++N
Sbjct: 84 VRSLSLDLTLDSPLNVQSCLRIFAEHFRLGRQEDAHEFLRYVIDACHNTCLRLKKLRRNG 143
Query: 302 SIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPP 361
S G VVKEI G Q+ K G+D + + + + LD+
Sbjct: 144 SYNGGATTGSSTVVKEI----FGGALQSQVKCLSCGNDSNKVD------EIMDISLDVLH 193
Query: 362 PPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFT 421
K+ ++K Q+ + + K+ + ++V VAR + + + P +++ ++RF
Sbjct: 194 SSSLKEALQK--FFQLEILDGSNKYKCDNCKKLV---VARKQMSILQAPNILVIQLKRF- 247
Query: 422 KNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG-KPEGGFYR 480
F K + + ++L+L +++ K ++ R +Y L IVH G E G Y
Sbjct: 248 -EGIFGGKIDKAIAYE-ESLQLSNFM----CKGSQDSRPEYKLFGTIVHSGFSAESGHYY 301
Query: 481 VFVQRKS 487
+++ S
Sbjct: 302 AYIKDAS 308
>gi|395520122|ref|XP_003764186.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Sarcophilus
harrisii]
Length = 599
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 131/332 (39%), Gaps = 60/332 (18%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R H + L+ F L + IW
Sbjct: 261 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLNSSSHAHTALMEEFAKLIQTIW 320
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSD------------ 293
+ + VSP EF + + + RF Q + EF+ +LL+ LH++
Sbjct: 321 TS-SANDVVSPSEFKTQIQRFAP-RFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKSNP 378
Query: 294 -----LRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETS 348
L + +K + + + E + ++ + + TE G T
Sbjct: 379 ENLDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTECG----------YCSTV 428
Query: 349 RMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---------TVTEVVRPHV 399
PF L L + K P+V L + ++ F E T
Sbjct: 429 FDPFWDLSLPI----------AKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRARKR 478
Query: 400 ARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLR 459
++ + + PK ++LH++RF+++ K T VNFP+++L+L+++ EN
Sbjct: 479 CIKKFSIQKFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFA-----SENTN-H 532
Query: 460 SKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+ Y+L A H G GG Y + + W
Sbjct: 533 AVYNLYAVSNHSGTTMGGHYTAYCRSPVTGEW 564
>gi|118138325|pdb|2IBI|A Chain A, Covalent Ubiquitin-Usp2 Complex
Length = 374
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 130/322 (40%), Gaps = 40/322 (12%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R + + LV F L + IW
Sbjct: 36 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIW 95
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-------RNTK 298
+ VSP EF + + + RF Q + EF+ +LL+ LH+++ ++
Sbjct: 96 TSSP-NDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 153
Query: 299 KNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLD 358
+N + + +G K + + D + D T PF L L
Sbjct: 154 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 213
Query: 359 LPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE---------VVRPHVARMRYRVTRL 409
+ K P+V L + ++ F E V + ++ + R
Sbjct: 214 I----------AKRGYPEVTLMDCMRLFTKEDVLDGDAAPTCCRCRGRKRCIKKFSIQRF 263
Query: 410 PKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIV 469
PK ++LH++RF+++ K T VNFP+++L+L+++ EN + Y+L A
Sbjct: 264 PKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREF-----ASENTN-HAVYNLYAVSN 317
Query: 470 HDGKPEGGFYRVFVQRKSEELW 491
H G GG Y + + W
Sbjct: 318 HSGTTMGGHYTAYCRSPGTGEW 339
>gi|403414385|emb|CCM01085.1| predicted protein [Fibroporia radiculosa]
Length = 658
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 142/367 (38%), Gaps = 100/367 (27%)
Query: 189 IRHVGLNNIKETDFVNVTIQSLMRVTPLRNFF----------LIPENYRHCKSPLVHRFG 238
IR GL N+ T ++N TIQ L P FF +I N K L F
Sbjct: 326 IRTSGLKNLGNTCYMNSTIQCLSATVPFARFFTEGRWKSAINMI--NPMGTKGNLAQAFA 383
Query: 239 DLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT- 297
++ + + + + +SP F +++ + + + F Q + EF+ +LL+ LH DL
Sbjct: 384 NILQDLQQSES--QCLSPGAFRRSLCRHAPQ-FDGTEQHDSQEFLHFLLDGLHEDLNRVL 440
Query: 298 --------------------------------KKNTSIIYECFQGELEVVKEIPKNTISG 325
++N S++ + FQG+L E +
Sbjct: 441 VRAQIDPTPEREAELERLPTQIASEQEWQIWQRRNDSLVVDFFQGQLRNRLECLTCHKTS 500
Query: 326 NDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKK 385
NT F+ L L +P + + +V L L
Sbjct: 501 TTYNT---------------------FMYLTLPVP---------TRRGLSKVSLSQCLDA 530
Query: 386 FDGETVTEVVR----PHVARMR-----YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNF 436
F E V E PH +R ++RLP ++++++RF+ F +K T V++
Sbjct: 531 FVKEEVMEESDAWNCPHCKTLRKATKNLSLSRLPPVLLIYLKRFSSKGHFTDKIETFVDY 590
Query: 437 PVKNLELKDYIPLP----------TPKENEKLR---SKYDLIANIVHDGKPEGGFYRVFV 483
PV++L+L +Y+PLP P+++ ++ +YDL H G G + FV
Sbjct: 591 PVRDLDLTNYMPLPLPPGVDGGPHMPRDDPGVQIPPYRYDLYGVTNHYGTLSSGHCKCFV 650
Query: 484 QRKSEEL 490
+ + L
Sbjct: 651 EDRLSAL 657
>gi|74000108|ref|XP_850913.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50
isoform 1 [Canis lupus familiaris]
Length = 373
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 138/333 (41%), Gaps = 48/333 (14%)
Query: 182 NDPSLEDIRH--------VGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPENYRHC 229
+ P+L ++R GL N+ T ++N +Q L V+PL +F+ I R C
Sbjct: 26 DAPALAELRASPPRRQGVTGLRNLGNTCYMNAILQCLCSVSPLVEYFVSGKYITALQRDC 85
Query: 230 KSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNT 289
+ + F + +W + VSP E ++ + + F Q + EF+ ++LN
Sbjct: 86 RE-VATAFAYVMTDMWLGDS--ECVSP-EVFRSALGSLYPAFMKKTQQDAQEFLIYVLNE 141
Query: 290 LHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSR 349
LH L+ + S E V + I+ + +G ++ + +
Sbjct: 142 LHEALKKYHRKRS-------HEKGSVLRCCRKVIASESSIITQLFEGQLNYSIMCLKCEN 194
Query: 350 MPF---LMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVA------ 400
+ + L LP P ++ ++ + F F +T+T + H +
Sbjct: 195 CTYKNEVFTVLSLPIPSEYECSLQDCL----QCF-----FQQDTLTWNNQIHCSFCETKQ 245
Query: 401 --RMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKL 458
+R +++ PK +I H++RF K T +++P+ NL+L YI P +++
Sbjct: 246 ETAVRASISKAPKIIIFHLKRFDILGTMKRKLRTDIHYPLTNLDLTPYI-CPVFRKHP-- 302
Query: 459 RSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
KY+L A + H G +GG Y F + + W
Sbjct: 303 --KYNLCAVVNHFGDLDGGHYTAFCKNSVTQAW 333
>gi|344278786|ref|XP_003411173.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like [Loxodonta
africana]
Length = 1108
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 99/261 (37%), Gaps = 63/261 (24%)
Query: 96 SRLVEVRRDCPYLDTVNR----QVLDFDFEKFCSVSLSNLNVYACLV--CGKYYQGRGQK 149
SR+ R CP+LD+V ++ + + N++ACL C G Q
Sbjct: 195 SRMSAFRNHCPHLDSVGEITKEDLIQKSYGTCQDCKVRGPNLWACLESRCSYVGCGESQV 254
Query: 150 SHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH----------- 191
H+ THS E H++ +NL T +V+C E+ PS ++R
Sbjct: 255 DHSTTHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSSPNVRQQHSTQENSVQD 314
Query: 192 -----------------------------------VGLNNIKETDFVNVTIQSLMRVTPL 216
GL NI T ++N +Q+L PL
Sbjct: 315 FKIPSNTTLKTPLVAVFDDLDVEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPL 374
Query: 217 RNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG 274
FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 375 TQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTNLFQGI-KTVNPTFRGY 432
Query: 275 VQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 433 SQQDAQEFLRCLMDLLHEELK 453
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 770 KVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 825
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 826 LSVICHHGTASSGHYIAYCRNNLNNLW 852
>gi|299856909|pdb|3NHE|A Chain A, High Resolution Structure (1.26a) Of Usp2a In Complex With
Ubiquitin
Length = 348
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 132/328 (40%), Gaps = 52/328 (15%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R + + LV F L + IW
Sbjct: 10 AGLRNLGNTXFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIW 69
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT----KKNT 301
+ VSP EF + + + RF Q + EF+ +LL+ LH+++ K N
Sbjct: 70 TSSP-NDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 127
Query: 302 SII---------YECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPF 352
+ + ++ LE + G +++ +D G T PF
Sbjct: 128 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCG------YCSTVFDPF 181
Query: 353 LMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE---------VVRPHVARMR 403
L L + K P+V L + ++ F E V + +
Sbjct: 182 WDLSLPIA----------KRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRGRKRCIKK 231
Query: 404 YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYD 463
+ + R PK ++LH++RF+++ K T VNFP+++L+L+++ EN + Y+
Sbjct: 232 FSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREF-----ASENTN-HAVYN 285
Query: 464 LIANIVHDGKPEGGFYRVFVQRKSEELW 491
L A H G GG Y + + W
Sbjct: 286 LYAVSNHSGTTMGGHYTAYCRSPGTGEW 313
>gi|126326536|ref|XP_001370349.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 1
[Monodelphis domestica]
Length = 600
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 131/332 (39%), Gaps = 60/332 (18%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R H + L+ F L + IW
Sbjct: 262 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLNSSSHAHTALMEEFAKLIQTIW 321
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSD------------ 293
+ + VSP EF + + + RF Q + EF+ +LL+ LH++
Sbjct: 322 TS-SANDVVSPSEFKTQIQRFAP-RFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKSNP 379
Query: 294 -----LRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETS 348
L + +K + + + E + ++ + + TE G T
Sbjct: 380 ENLDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTECG----------YCSTV 429
Query: 349 RMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---------TVTEVVRPHV 399
PF L L + K P+V L + ++ F E T
Sbjct: 430 FDPFWDLSLPI----------AKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRARKR 479
Query: 400 ARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLR 459
++ + + PK ++LH++RF+++ K T VNFP+++L+L+++ EN
Sbjct: 480 CIKKFSIQKFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFA-----SENTN-H 533
Query: 460 SKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+ Y+L A H G GG Y + + W
Sbjct: 534 AVYNLYAVSNHSGTTMGGHYTAYCRSPVTGEW 565
>gi|291225440|ref|XP_002732713.1| PREDICTED: ubiquitin specific protease 8-like [Saccoglossus
kowalevskii]
Length = 1150
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 131/341 (38%), Gaps = 79/341 (23%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCK--------SPLVHRFGDLTRK 243
GL N+ T F+N IQSL TPL +F+ H + F +
Sbjct: 809 TGLKNLGNTCFMNSIIQSLANSTPLATYFIEGSYKYHINRENKLGRGGKVAEEFAVVINA 868
Query: 244 IW--HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-- 299
IW H R+ +SP +F V K + F Q + EF+ +LL+ LH DL K
Sbjct: 869 IWSGHYRS----ISPRDFKLTVSKFVPQ-FAGYEQQDSQEFLLFLLDGLHEDLNRVKHRK 923
Query: 300 --------------------------NTSIIYECFQGELEVVKEIPKNTISGNDQNTEKG 333
N SI+ E FQG+ K+T+ +K
Sbjct: 924 YIEEKDNTHLTDDQAAQLAWNNHKRLNESIMVELFQGQF-------KSTLQC--LFCQKK 974
Query: 334 SDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE 393
S D F+ L L PL + ++ V F L+K G
Sbjct: 975 SVTYD------------AFMYLSL-----PLLSN-NRCSLYDCVKNFTKLEKVGGADKWF 1016
Query: 394 VVRPHV---ARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLP 450
+ V A R + +LP +++H++RF+ + K T V+FP+ NL++ ++ P
Sbjct: 1017 CPKCKVHREANKRIEIWKLPHILLIHLKRFSYEGVWRHKLQTDVDFPINNLDMSSHVIGP 1076
Query: 451 TPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
K RS Y+L A H G +GG Y F + + W
Sbjct: 1077 ------KKRSSYNLYAVSNHYGTMDGGHYTAFCKNAIRQKW 1111
>gi|268569258|ref|XP_002640473.1| Hypothetical protein CBG13606 [Caenorhabditis briggsae]
Length = 538
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 146/324 (45%), Gaps = 59/324 (18%)
Query: 190 RHVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-IPENYRHCKSPLVHRFG-----DLTRK 243
R GL N+ T F+N +Q+L + R + L +P + + + + G D +K
Sbjct: 219 RPRGLRNLGNTCFMNAVLQALACIKDFREYILNLPSLEDYVEDEKIAQNGNCFLTDEYQK 278
Query: 244 I---WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK- 299
+ ARNF+ SP+EF +A + A RFR Q + EF+ +LL+ +H+++R +
Sbjct: 279 LLASMSARNFRDPTSPNEFREAFVSAC-PRFRGFRQHDSHEFLRYLLDQMHTEMRKCRNL 337
Query: 300 ------NTSIIYECFQGELE--VVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMP 351
T+ I + F+G L+ V+ + +N S+ DD
Sbjct: 338 PEMPDDKTTPISKSFEGTLQSSVICQTCRNV-----------SNKMDD------------ 374
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQVPLF---NILKKFDGETVTEVVRPHVARMRYRVTR 408
F+ L LD+P + + + LF +L+K + ++ + + +
Sbjct: 375 FMDLSLDVPRVSKARYRLSDCL----DLFFQRELLEKGEKPECSKCKSKQTCSKQMFIKK 430
Query: 409 LPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANI 468
LP+ + LH++RF N ++ TL+ FP+ L + D++ +++++ Y+L + I
Sbjct: 431 LPEVLCLHIKRFRDNGGKID---TLIEFPLTGLSVDDFL----TEDSDEPPCVYELHSII 483
Query: 469 VHDG-KPEGGFYRVFVQRKSEELW 491
VH G G Y F +R ++ W
Sbjct: 484 VHIGYGCSSGHYIAFGRRGAK--W 505
>gi|19920418|ref|NP_608462.1| CG14619, isoform A [Drosophila melanogaster]
gi|24643789|ref|NP_728453.1| CG14619, isoform D [Drosophila melanogaster]
gi|24643791|ref|NP_728454.1| CG14619, isoform E [Drosophila melanogaster]
gi|17862942|gb|AAL39948.1| SD04280p [Drosophila melanogaster]
gi|22832690|gb|AAF50952.2| CG14619, isoform A [Drosophila melanogaster]
gi|22832691|gb|AAN09564.1| CG14619, isoform D [Drosophila melanogaster]
gi|22832692|gb|AAN09565.1| CG14619, isoform E [Drosophila melanogaster]
Length = 856
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 127/349 (36%), Gaps = 70/349 (20%)
Query: 177 DGYEINDPSLEDIRH--VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-- 232
DGY+ S ++ GL NI T F+N IQ L L F R +
Sbjct: 514 DGYKTASSSRDEKSEGLCGLRNIGNTCFMNSVIQCLSHTQELTRFLRSHHGSRSLSTKDQ 573
Query: 233 -LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH 291
++H F L +++W A V+P E L+ + + Q + EF+ + L++LH
Sbjct: 574 QILHEFAKLIQEMWTANVH--TVTPME-LKRAFSTKHRMYSDYNQQDAQEFLRFFLDSLH 630
Query: 292 SDLRN--------------------------TKKNTSIIYECFQGELEVVKEIPKNTISG 325
S L + T+ S++ + F G+L K K T G
Sbjct: 631 SALNSGVKGETLNIDDNLSDNKKADLTWEWYTRHENSLVRDLFVGQL---KSTLKCTTCG 687
Query: 326 NDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKK 385
N T + PF L + LP K + + LF +
Sbjct: 688 N------------------TSVTFDPFWDLSVPLPSSSRCK------LEACLDLFIREEV 723
Query: 386 FDGETVTEVVRPHVARM---RYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLE 442
DG+ + + R + + R PKY+++H++RF++ + K +V FP + E
Sbjct: 724 LDGDEMPTCAKCKTRRKCTKSFTIQRFPKYLVIHLKRFSETRW--SKLSNIVEFPTSDSE 781
Query: 443 LKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
L + + N Y L A H G GG Y + W
Sbjct: 782 LN----MGSYGANSNSNVHYSLYAISNHMGSTAGGHYVALCKHPVSRKW 826
>gi|335295001|ref|XP_003357373.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 2
[Sus scrofa]
Length = 396
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 134/338 (39%), Gaps = 72/338 (21%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL---IPENYRHCKSP---LVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L + H S L+ F L + IW
Sbjct: 58 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSSAHTALMEEFAKLIQTIW 117
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIY 305
+ VSP EF + + + RF Q + EF+ +LL+ LH+
Sbjct: 118 TSSP-NDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHN------------- 162
Query: 306 ECFQGELEVVKEIPKNTISGNDQ--NTEKGSDGGDDHDNITTETSRMPFLMLG------- 356
E+ V PK++ G D + EKG + + E SR+ L +G
Sbjct: 163 -----EVNRVTVRPKSSPEGLDHLPDDEKGRQMWRKY--LEREDSRIGDLFVGQLKSSLT 215
Query: 357 --------------LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE--------- 393
DL P + K P+V L + ++ F E V +
Sbjct: 216 CTDCGYCSTVFDPFWDLSLP------IAKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCR 269
Query: 394 VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPK 453
++ V R PK ++LH++RF+++ K T VNFP+++L+L+++
Sbjct: 270 CRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREF-----AS 324
Query: 454 ENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
EN + Y+L A H G GG Y + + W
Sbjct: 325 ENIN-HAVYNLYAVSNHSGTTMGGHYTAYCRSPVTGEW 361
>gi|114794332|pdb|2HD5|A Chain A, Usp2 In Complex With Ubiquitin
Length = 359
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 132/328 (40%), Gaps = 52/328 (15%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R + + LV F L + IW
Sbjct: 10 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIW 69
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT----KKNT 301
+ VSP EF + + + RF Q + EF+ +LL+ LH+++ K N
Sbjct: 70 TSSP-NDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 127
Query: 302 SII---------YECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPF 352
+ + ++ LE + G +++ +D G T PF
Sbjct: 128 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCG------YCSTVFDPF 181
Query: 353 LMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE---------VVRPHVARMR 403
L L + K P+V L + ++ F E V + +
Sbjct: 182 WDLSLPIA----------KRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRGRKRCIKK 231
Query: 404 YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYD 463
+ + R PK ++LH++RF+++ K T VNFP+++L+L+++ EN + Y+
Sbjct: 232 FSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREF-----ASENTN-HAVYN 285
Query: 464 LIANIVHDGKPEGGFYRVFVQRKSEELW 491
L A H G GG Y + + W
Sbjct: 286 LYAVSNHSGTTMGGHYTAYCRSPGTGEW 313
>gi|430800750|pdb|3V6C|A Chain A, Crystal Structure Of Usp2 In Complex With Mutated
Ubiquitin
gi|430800752|pdb|3V6E|A Chain A, Crystal Structure Of Usp2 And A Mutant Form Of Ubiquitin
Length = 367
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 130/322 (40%), Gaps = 40/322 (12%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R + + LV F L + IW
Sbjct: 29 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIW 88
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-------RNTK 298
+ VSP EF + + + RF Q + EF+ +LL+ LH+++ ++
Sbjct: 89 TSSP-NDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 146
Query: 299 KNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLD 358
+N + + +G K + + D + D T PF L L
Sbjct: 147 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 206
Query: 359 LPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE---------VVRPHVARMRYRVTRL 409
+ K P+V L + ++ F E V + ++ + R
Sbjct: 207 I----------AKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRF 256
Query: 410 PKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIV 469
PK ++LH++RF+++ K T VNFP+++L+L+++ EN + Y+L A
Sbjct: 257 PKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREF-----ASENTN-HAVYNLYAVSN 310
Query: 470 HDGKPEGGFYRVFVQRKSEELW 491
H G GG Y + + W
Sbjct: 311 HSGTTMGGHYTAYCRSPGTGEW 332
>gi|426370762|ref|XP_004052330.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Gorilla gorilla
gorilla]
Length = 355
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 132/328 (40%), Gaps = 52/328 (15%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R + + LV F L + IW
Sbjct: 24 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIW 83
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT----KKNT 301
+ VSP EF + + + RF Q + EF+ +LL+ LH+++ K N
Sbjct: 84 TSSP-NDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 141
Query: 302 SII---------YECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPF 352
+ + ++ LE + G +++ +D G T PF
Sbjct: 142 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCG------YCSTVFDPF 195
Query: 353 LMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE---------VVRPHVARMR 403
L L + K P+V L + ++ F E V + +
Sbjct: 196 WDLSLPI----------AKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRGRKRCIKK 245
Query: 404 YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYD 463
+ + R PK ++LH++RF+++ K T VNFP+++L+L+++ EN + Y+
Sbjct: 246 FSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREF-----ASENTN-HAVYN 299
Query: 464 LIANIVHDGKPEGGFYRVFVQRKSEELW 491
L A H G GG Y + + W
Sbjct: 300 LYAVSNHSGTTMGGHYTAYCRSPGTGEW 327
>gi|195058982|ref|XP_001995537.1| GH17708 [Drosophila grimshawi]
gi|193896323|gb|EDV95189.1| GH17708 [Drosophila grimshawi]
Length = 847
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 134/340 (39%), Gaps = 50/340 (14%)
Query: 175 LPDGYEIN-DPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFF----LIPENYRHC 229
+ DGY+ N D E + GL NI T F+N IQ L T L F P +
Sbjct: 505 IDDGYKSNRDEKFEGL--CGLRNIGNTCFMNSVIQCLSHTTELTRFLRGHNASPRSATSK 562
Query: 230 KSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNT 289
++H F L +++W V+P E L+ + + Q + EF+ + L++
Sbjct: 563 DQQILHEFAKLIQEMWTTNVH--SVTPME-LKRAFSLKHRMYNDYNQQDAQEFLRFFLDS 619
Query: 290 LHSDLR--------------NTKKNTSIIYECF-QGELEVVKEIPKNTISGNDQNTEKGS 334
LHS L + K + +E + + E +++++ G ++T K +
Sbjct: 620 LHSALNTGVKGETLNIDDNLSDNKKADLTWEWYARHENSLIRDL----FVGQLKSTLKCT 675
Query: 335 DGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEV 394
G+ T + PF L + LP K + + LF + DG+ +
Sbjct: 676 TCGN------TSVTFDPFWDLSVPLPSSSRCK------LESCLDLFIREEVLDGDEMPTC 723
Query: 395 VRPHVARM---RYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPT 451
+ R + + R PKY+++H++RF++ + K +V FP + EL + +
Sbjct: 724 SKCKTRRKCTKSFTIQRFPKYLVIHLKRFSETRW--SKLSNIVEFPTADRELN----MAS 777
Query: 452 PKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
N Y L A H G GG Y + W
Sbjct: 778 YGANANSNVHYSLYAISNHMGSTAGGHYVAICKHPVSHKW 817
>gi|114052498|ref|NP_932760.2| ubiquitin carboxyl-terminal hydrolase 2 isoform Usp2-69 [Mus
musculus]
gi|114052502|ref|NP_058088.2| ubiquitin carboxyl-terminal hydrolase 2 isoform Usp2-69 [Mus
musculus]
gi|17028406|gb|AAH17517.1| Ubiquitin specific peptidase 2 [Mus musculus]
gi|34874899|gb|AAQ83302.1| deubiquitinating enzyme Usp2-69 [Mus musculus]
gi|34874937|gb|AAQ83304.1| deubiquitinating enzyme Usp2-69 [Mus musculus]
gi|74218334|dbj|BAE23782.1| unnamed protein product [Mus musculus]
Length = 619
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 132/338 (39%), Gaps = 72/338 (21%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR---HCKSP---LVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R H S L+ F L + IW
Sbjct: 281 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQTIW 340
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIY 305
+ + VSP EF + + + RF Q + EF+ +LL+ LH+++
Sbjct: 341 TS-SPNDVVSPSEFKTQIQRYAP-RFMGYNQQDAQEFLRFLLDGLHNEVNRVAARP---- 394
Query: 306 ECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLG--------- 356
+ E + +P + EKG + + E SR+ L +G
Sbjct: 395 ---KASPETLDHLP---------DEEKGRQMWRKY--LEREDSRIGDLFVGQLKSSLTCT 440
Query: 357 --------------LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---------TVTE 393
L LP + K P+V L + ++ F E T
Sbjct: 441 DCGYCSTVFDPFWDLSLP--------IAKRGYPEVTLMDCMRLFTKEDILDGDEKPTCCR 492
Query: 394 VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPK 453
++ V R PK ++LH++RF+++ K T VNFP+++L+L+++
Sbjct: 493 CRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFA-----S 547
Query: 454 ENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
EN + Y+L A H G GG Y + + W
Sbjct: 548 ENTN-HAVYNLYAVSNHSGTTMGGHYTAYCRSPVTGEW 584
>gi|410915022|ref|XP_003970986.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Takifugu
rubripes]
Length = 395
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 136/338 (40%), Gaps = 71/338 (21%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRKI 244
VGL N+ T F+N +Q L LR++ L + +N + L+ F L + +
Sbjct: 50 VGLRNLGNTCFMNTILQCLSNTPDLRDYCLTNVHRLDLGDNCTA-NTTLMEEFAKLIQSL 108
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSII 304
+ + + +SP + + + + K F Q + EF+ +LL+ LH+D+
Sbjct: 109 CLSGSNEA-ISPSDVWKQIQQYGPK-FVGCNQQDAQEFLRFLLDGLHNDVNR-------- 158
Query: 305 YECFQGELEVVKEIPKNTISGNDQNTEKGSDG----------------------GDDHDN 342
+PK +SG+D N G D G +
Sbjct: 159 ----------ASVLPK--VSGHD-NDHLGDDEKSKRMWNLYLEREDSKVVDLFVGQLKSS 205
Query: 343 IT------TETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVR 396
+T T T PF L + +P ++V K+ + LF DG+ R
Sbjct: 206 VTCTFCGFTSTVFDPFWDLSIPIPAQKSSEEVTLKDCLR---LFTKEDVLDGDESPMCCR 262
Query: 397 PHVARM---RYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPK 453
R R+ + R P+ ++LH++RF+ ++ K T VNFP+K LE++++ T
Sbjct: 263 CKSRRKCTKRFSIQRFPQILVLHLKRFSDSSVRTSKLSTYVNFPLKELEMREFA--TTGG 320
Query: 454 ENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
E R YDL A H G GG Y + + S W
Sbjct: 321 E----RVTYDLYAVSNHSGNAMGGHYTAYCRHPSLGEW 354
>gi|118344206|ref|NP_001071926.1| zinc finger protein [Ciona intestinalis]
gi|92081556|dbj|BAE93325.1| zinc finger protein [Ciona intestinalis]
Length = 1145
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 80/164 (48%), Gaps = 27/164 (16%)
Query: 151 HAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSL 210
H T E+GH V N + D +I+ P L + GL N+ T F+N IQ+L
Sbjct: 332 HLETLLHESGHLVSPNT-------VGDTKKISQPGL---GYTGLINLGNTCFMNSVIQAL 381
Query: 211 MRVTPLRNFFLIPENYRHC----KSPL------VHRFGDLTRKIWHARNFKGQVSPHEFL 260
LRN+FL + HC K+PL F + RK+W N SPHEF
Sbjct: 382 ANTPELRNYFL--DEKFHCHINTKNPLGVGGKMAKAFYVVMRKLWGCSN--KAFSPHEFR 437
Query: 261 QAV-MKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
V +K S RF G+Q + EFM++LL+ LH DL + +TSI
Sbjct: 438 DVVGLKGS--RFTDGMQHDAHEFMAFLLDMLHEDLNTARNSTSI 479
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 400 ARMRYRVTRLPKYMILHMRRFT-KNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKL 458
A + + LP +I+ ++RF+ KN + +K ++ PV N ++ Y PK ++ L
Sbjct: 865 AMKKMSLWDLPDVLIIQLKRFSFKNYLWRDKINMFIDLPVSNFDMTSYCN--NPKTSKSL 922
Query: 459 RSKYDLIANIVHDGKPEGGFYRVFVQ 484
YDL A I H G GG Y V+
Sbjct: 923 C--YDLFAVINHHGGILGGHYTTNVR 946
>gi|344293060|ref|XP_003418242.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Loxodonta
africana]
Length = 396
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 136/338 (40%), Gaps = 72/338 (21%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL---IPENYRHCKSP---LVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L + H S L+ F L + IW
Sbjct: 58 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLSHSSSAHTALMEEFAKLIQTIW 117
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIY 305
+ VSP EF + + + RF Q + EF+ +LL+ LH+
Sbjct: 118 TSSP-NDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHN------------- 162
Query: 306 ECFQGELEVVKEIPKNTISGNDQ--NTEKGSDGGDDHDNITTETSRMPFLMLG------- 356
E+ V PK+ D+ + EKG + + E SR+ L +G
Sbjct: 163 -----EVNRVTVRPKSNPENLDRLPDDEKGRQMWRKY--LEREDSRIGDLFVGQLKSSLT 215
Query: 357 --------------LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEV-VRPHVAR 401
DL P + K P+V L + ++ F E V + +P R
Sbjct: 216 CTECGYCSTVFDPFWDLSLP------IAKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCR 269
Query: 402 M--------RYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPK 453
++ + R PK ++LH++RF+++ K T V+FP+++L+L+++
Sbjct: 270 CGARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVSFPLRDLDLREF-----AS 324
Query: 454 ENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
EN + Y+L A H G GG Y + + W
Sbjct: 325 ENTN-HAVYNLYAVSNHSGTTMGGHYTAYCRSPGTGEW 361
>gi|3386550|gb|AAC28392.1| ubiquitin-specific protease UBP41 [Homo sapiens]
Length = 353
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 132/328 (40%), Gaps = 52/328 (15%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R + + LV F L + IW
Sbjct: 15 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIW 74
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT----KKNT 301
+ VSP EF + + + RF Q + EF+ +LL+ LH+++ K N
Sbjct: 75 TSSP-NDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 132
Query: 302 SII---------YECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPF 352
+ + ++ LE + G +++ +D G T PF
Sbjct: 133 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCG------YCSTVFDPF 186
Query: 353 LMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE---------VVRPHVARMR 403
L L + K P+V L + ++ F E V + +
Sbjct: 187 WDLSLPIA----------KRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRGRKRCIKK 236
Query: 404 YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYD 463
+ + R PK ++LH++RF+++ K T VNFP+++L+L+++ EN + Y+
Sbjct: 237 FSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREF-----ASENTN-HAVYN 290
Query: 464 LIANIVHDGKPEGGFYRVFVQRKSEELW 491
L A H G GG Y + + W
Sbjct: 291 LYAVSNHSGTTMGGHYTAYCRSPGTGEW 318
>gi|114152901|sp|O88623.2|UBP2_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=41 kDa ubiquitin-specific protease; AltName:
Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2
gi|34874927|gb|AAQ83303.1| deubiquitinating enzyme Usp2-69 [Mus musculus]
Length = 613
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 132/338 (39%), Gaps = 72/338 (21%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR---HCKSP---LVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R H S L+ F L + IW
Sbjct: 275 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQTIW 334
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIY 305
+ + VSP EF + + + RF Q + EF+ +LL+ LH+++
Sbjct: 335 TS-SPNDVVSPSEFKTQIQRYAP-RFMGYNQQDAQEFLRFLLDGLHNEVNRVAARP---- 388
Query: 306 ECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLG--------- 356
+ E + +P + EKG + + E SR+ L +G
Sbjct: 389 ---KASPETLDHLP---------DEEKGRQMWRKY--LEREDSRIGDLFVGQLKSSLTCT 434
Query: 357 --------------LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---------TVTE 393
L LP + K P+V L + ++ F E T
Sbjct: 435 DCGYCSTVFDPFWDLSLP--------IAKRGYPEVTLMDCMRLFTKEDILDGDEKPTCCR 486
Query: 394 VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPK 453
++ V R PK ++LH++RF+++ K T VNFP+++L+L+++
Sbjct: 487 CRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFA-----S 541
Query: 454 ENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
EN + Y+L A H G GG Y + + W
Sbjct: 542 ENTN-HAVYNLYAVSNHSGTTMGGHYTAYCRSPVTGEW 578
>gi|242211549|ref|XP_002471612.1| predicted protein [Postia placenta Mad-698-R]
gi|220729288|gb|EED83165.1| predicted protein [Postia placenta Mad-698-R]
Length = 1026
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 140/341 (41%), Gaps = 55/341 (16%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFF--------LIPENYRHCKSPLVHRFGDLTRKI 244
GL N+ T ++N TIQ L P FF + N K L + F ++ R +
Sbjct: 670 GLKNLGNTCYMNSTIQCLSATVPFSRFFTDGRWKSAVNMMNPMGTKGNLANAFANILRDM 729
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI- 303
W +SP F +++ + + F Q + EF+++LL+ LH DL + I
Sbjct: 730 WQGE--MQCLSPVTFRRSLCMYAPQ-FGGTEQHDSQEFLNFLLDGLHEDLNRVLQKPQIE 786
Query: 304 IYECFQGELE-----VVKEIPKNTISGNDQNTEKGSDGGDDHDNI------TTETSRMPF 352
+ ELE + +E + + G + + T T+ F
Sbjct: 787 TTPEREAELERLPTQIAREQEWQIWRMRNDSLVVDFFQGQFRNRLECLTCHKTSTTYNTF 846
Query: 353 LMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVR----PHVARMR----- 403
+ L L P P+ + +V L+ L F E V E PH +R
Sbjct: 847 MYLTL---PIPIGRGS-------KVSLYQCLDAFVKEEVMEKSDAWNCPHCKALRKATKN 896
Query: 404 YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTP----------K 453
++RLP +++H++RF+ F +K T V++P+++L+L +Y+P P P +
Sbjct: 897 LSLSRLPPVLLIHLKRFSSKGHFTDKIETFVDYPIRSLDLTNYMPPPLPPGVDMGLQPSR 956
Query: 454 ENEKLRS---KYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
++ + + +YDL H G G Y F+ + L+
Sbjct: 957 DDPRAQVPPYRYDLYGVTNHFGTLSSGHYTAFISSRGGWLY 997
>gi|299744717|ref|XP_001831228.2| ubiquitin carboxyl-terminal hydrolase 4 [Coprinopsis cinerea
okayama7#130]
gi|298406256|gb|EAU90391.2| ubiquitin carboxyl-terminal hydrolase 4 [Coprinopsis cinerea
okayama7#130]
Length = 1108
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 136/342 (39%), Gaps = 54/342 (15%)
Query: 189 IRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-----IPENYRHC---KSPLVHRFGDL 240
I GL N+ T ++N IQ L P FF NY + + LV F L
Sbjct: 743 IGTSGLKNLGNTCYMNAPIQCLSATVPFARFFTEGRWKTAINYTNSLGSQGRLVQAFAKL 802
Query: 241 TRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGV-QSNPVEFMSWLLNTLHSDLRNTKK 299
++W ++P +F +++ + +++ IG Q + EF+S+LL+ +H DL
Sbjct: 803 VHEMWGGD--LPYLTPMDFRKSICQLNQQY--IGSDQHDSQEFLSFLLDGVHEDLNRVMV 858
Query: 300 NTSIIYECFQ-GELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNIT-------------- 344
I+ Q ELE +P S + K + D
Sbjct: 859 KPKIVVTPEQEAELE---RLPPMIASDREWRNWKARNDSIIVDFFQGQFRSRLQCLTCEK 915
Query: 345 TETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFN--ILKKFDGETVTEVVRPHVARM 402
T T+ F +L + +P K +++ + LFN +L+K D + A
Sbjct: 916 TSTTYNVFSILQVPIPNSRSSKVPLQRCLDA---LFNEEVLEKDDAWDCPQCKTKRRASK 972
Query: 403 RYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLR--- 459
+ RLP +++H++RF N F +K T V FP+K+L+L +Y+P P P +K
Sbjct: 973 TLSLARLPPILLIHLKRFEANGRFSDKIDTFVEFPMKSLDLTNYMPPPLPPGADKSEING 1032
Query: 460 ---------------SKYDLIANIVHDGKPEGGFYRVFVQRK 486
KYDL H G G Y ++ +
Sbjct: 1033 GVPMSLEDPRTQVPPYKYDLYGVTNHYGNLSSGHYTAYIASR 1074
>gi|344313155|ref|NP_001230688.1| ubiquitin carboxyl-terminal hydrolase 2 isoform c [Homo sapiens]
Length = 362
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 130/322 (40%), Gaps = 40/322 (12%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R + + LV F L + IW
Sbjct: 24 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIW 83
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-------RNTK 298
+ VSP EF + + + RF Q + EF+ +LL+ LH+++ ++
Sbjct: 84 TSSP-NDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 141
Query: 299 KNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLD 358
+N + + +G K + + D + D T PF L L
Sbjct: 142 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 201
Query: 359 LPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE---------VVRPHVARMRYRVTRL 409
+ K P+V L + ++ F E V + ++ + R
Sbjct: 202 I----------AKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRF 251
Query: 410 PKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIV 469
PK ++LH++RF+++ K T VNFP+++L+L+++ EN + Y+L A
Sbjct: 252 PKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREF-----ASENTN-HAVYNLYAVSN 305
Query: 470 HDGKPEGGFYRVFVQRKSEELW 491
H G GG Y + + W
Sbjct: 306 HSGTTMGGHYTAYCRSPGTGEW 327
>gi|351698262|gb|EHB01181.1| Ubiquitin carboxyl-terminal hydrolase 3 [Heterocephalus glaber]
Length = 537
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 130/332 (39%), Gaps = 71/332 (21%)
Query: 185 SLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKI 244
S I GL N+ T F+N +QSL LV F +
Sbjct: 200 STTAICATGLRNLGNTCFMNAILQSL--------------------RSLVEEFRKTLCAL 239
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR---NTKKNT 301
W + SP V K FR Q + EFM +LL+ LH +L+ N +
Sbjct: 240 WQGS--QTAFSPESLFYVVWKI-MPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRS 296
Query: 302 SIIYE----------CFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM- 350
+++ E C G VV I G QN G TE+ +
Sbjct: 297 AMLQENSSLSASNKCCINGASTVVTAI----FGGILQNEVNCLICG-------TESRKFD 345
Query: 351 PFLMLGLDLPPPPLFKDVMEKN--------IIPQVPLFN-ILKKF-DGETV--TEVVRPH 398
PFL L LD+P F+ KN + Q+ L + L+ F D E + TE+ H
Sbjct: 346 PFLDLSLDIPSQ--FRSKRSKNQENGPVCSLRAQITLVSDCLRSFTDLEELDETELYMCH 403
Query: 399 VARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTP 452
+ + + + +LPK + LH++RF + K T V FP++ L++K Y L P
Sbjct: 404 KCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY--LLEP 461
Query: 453 KENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
+ + YDL A +VH G G G Y +
Sbjct: 462 ENSGPESCLYDLAAVVVHHGSGVGSGHYTAYA 493
>gi|426233320|ref|XP_004010665.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Ovis aries]
Length = 378
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 136/327 (41%), Gaps = 42/327 (12%)
Query: 180 EINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPENYRHCKSPLVH 235
E N P L+ + GL N+ T ++N +Q L ++PL +FL I + C S +
Sbjct: 39 EENQPHLQGV--TGLRNLGNTCYMNAILQCLCSISPLVEYFLSGKYINALQKGC-SEVAT 95
Query: 236 RFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR 295
F + +W A VSP E L++ + F Q + EF+ ++LN LH L+
Sbjct: 96 AFAYVMTDMWLADC--DCVSP-EILRSALGNLYPVFMKKTQQDAQEFLIYVLNELHEALK 152
Query: 296 NTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPF--- 352
+ S E + + I+ + +G + + + +
Sbjct: 153 KYHRRKSY-------EKRSIPRYCRKMIANESSIITRLFEGQLSYSIVCLKCENCTYKNE 205
Query: 353 LMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVA--------RMRY 404
+ + LP P ++ ++ + F F +T+T + H + +R
Sbjct: 206 VFTIISLPIPSKYECSLQDCL----QCF-----FQQDTLTWNNQIHCSFCETKQETAVRA 256
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+++ PK ++ H++RF K T +++P+ NL+L YI P +++ KY+L
Sbjct: 257 TISKAPKTIVFHLKRFDILGTMKRKLRTDIHYPLTNLDLTPYI-CPIFRKH----PKYNL 311
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
A + H G +GG Y F + + W
Sbjct: 312 CAVVNHFGDLDGGHYTAFSKNSVTQAW 338
>gi|410961319|ref|XP_003987231.1| PREDICTED: LOW QUALITY PROTEIN: putative ubiquitin
carboxyl-terminal hydrolase 50-like [Felis catus]
Length = 381
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 138/327 (42%), Gaps = 43/327 (13%)
Query: 180 EINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPENYRHCKSPLVH 235
E N P + + GL N+ T ++N +Q L ++PL +FL I + C S +
Sbjct: 34 EENQPHSQGV--TGLRNLGNTCYMNAILQCLCSISPLAEYFLSGKYITALQKDC-SEVAT 90
Query: 236 RFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR 295
F + +W + VSP E ++ F Q + EF+ ++LN LH L+
Sbjct: 91 AFAYVMTDMWLGDS--ECVSP-EIFRSAFGNLYPAFMKKTQQDAQEFLIYVLNELHESLK 147
Query: 296 NTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPF--- 352
+ + YE +G + + TI+ + +G ++ + + +
Sbjct: 148 KCHRKS---YE--KGS---IPRCCRKTIANEVSIITQLFEGQLNYSIMCLKCENCTYKNE 199
Query: 353 LMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVA--------RMRY 404
+ L LP P ++ ++ + F F +T+T + H + +R
Sbjct: 200 VFTILCLPIPSDYECSLQDCL----QCF-----FQQDTLTWHNQIHCSFCETKQETAVRA 250
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+++ PK +I H++RF K T +++P+ NL+L YI P +++ KY+L
Sbjct: 251 SISKAPKVIIFHLKRFDILGTMKRKLRTDIHYPLTNLDLSPYI-CPVFRKH----PKYNL 305
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
A + H G +GG Y F + + W
Sbjct: 306 CAVVNHFGDLDGGHYTAFCKNSVTQAW 332
>gi|358341643|dbj|GAA49264.1| ubiquitin carboxyl-terminal hydrolase 2 [Clonorchis sinensis]
Length = 655
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 127/326 (38%), Gaps = 45/326 (13%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY-------RHCKSPLVHRFGDLTRKI 244
VGLNN+ T F+N IQ L PL + I E Y + L + L ++
Sbjct: 319 VGLNNLGNTCFMNSIIQCLSNTHPLLE-YCISERYVNDLNKSSTMRGNLFTAYASLMNEL 377
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSII 304
W F+ SP +F + + + RF Q + EF+ ++L LH+++ K +
Sbjct: 378 WDPEMFESSTSPMQFKTQIQRFA-PRFVGYSQQDSQEFLRYVLEGLHNEVNRVTKRPHPV 436
Query: 305 YECFQGE----------------LEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETS 348
+ E L + + G +T + ++ G T+
Sbjct: 437 TPDYAAEDKLADRDKADLYWKRYLSMDNSAIVDLFVGQLMSTLECAECG------FKSTT 490
Query: 349 RMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARM---RYR 405
PF L L +P NI+ + LF + DG R V R +
Sbjct: 491 FDPFWDLSLPIP------KKANVNIMDCLRLFTSKEDLDGHERPMCGRCKVRRRCTKHFS 544
Query: 406 VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLI 465
+ + P+ ++LH++RF+ F K LV++P+ +L L ++ +P ++ ++Y+L
Sbjct: 545 LQKFPRILVLHLKRFSGER-FRSKMSVLVDYPLNDLNLSEFA---SPSCQQRY-ARYNLY 599
Query: 466 ANIVHDGKPEGGFYRVFVQRKSEELW 491
A H G G Y + W
Sbjct: 600 AVSNHSGSVYAGHYTAICRHHYRNSW 625
>gi|441644453|ref|XP_003253547.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Nomascus
leucogenys]
Length = 577
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 130/322 (40%), Gaps = 40/322 (12%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R + + L+ F L + IW
Sbjct: 267 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALMEEFAKLIQTIW 326
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-------RNTK 298
+ + VSP EF + + + RF Q + EF+ +LL+ LH+++ ++
Sbjct: 327 TS-SPNDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 384
Query: 299 KNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLD 358
+N + + +G K + + D + D T PF L L
Sbjct: 385 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 444
Query: 359 LPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---------TVTEVVRPHVARMRYRVTRL 409
+ K P+V L + ++ F E T ++ + R
Sbjct: 445 I----------AKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRF 494
Query: 410 PKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIV 469
PK ++LH++RF+++ K T VNFP+++L+L+++ EN + Y+L A
Sbjct: 495 PKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFA-----SENTN-HAVYNLYAVSN 548
Query: 470 HDGKPEGGFYRVFVQRKSEELW 491
H G GG Y + + W
Sbjct: 549 HSGTTMGGHYTAYCRSPGTGEW 570
>gi|402895527|ref|XP_003910877.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Papio anubis]
Length = 605
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 130/322 (40%), Gaps = 40/322 (12%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R + + L+ F L + IW
Sbjct: 267 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHSSNAHTALMEEFAKLIQTIW 326
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-------RNTK 298
+ + VSP EF + + + RF Q + EF+ +LL+ LH+++ ++
Sbjct: 327 TS-SPNDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 384
Query: 299 KNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLD 358
+N + + +G K + + D + D T PF L L
Sbjct: 385 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 444
Query: 359 LPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---------TVTEVVRPHVARMRYRVTRL 409
+ K P+V L + ++ F E T ++ + R
Sbjct: 445 I----------AKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRF 494
Query: 410 PKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIV 469
PK ++LH++RF+++ K T VNFP+++L+L+++ EN + Y+L A
Sbjct: 495 PKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFA-----SENTN-HAVYNLYAVSN 548
Query: 470 HDGKPEGGFYRVFVQRKSEELW 491
H G GG Y + + W
Sbjct: 549 HSGTTMGGHYTAYCRSPGTGEW 570
>gi|27371223|gb|AAH41366.1| USP2 protein [Homo sapiens]
gi|119587890|gb|EAW67486.1| ubiquitin specific peptidase 2, isoform CRA_c [Homo sapiens]
Length = 362
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 132/328 (40%), Gaps = 52/328 (15%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R + + LV F L + IW
Sbjct: 24 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIW 83
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT----KKNT 301
+ VSP EF + + + RF Q + EF+ +LL+ LH+++ K N
Sbjct: 84 TSSP-NDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 141
Query: 302 SII---------YECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPF 352
+ + ++ LE + G +++ +D G T PF
Sbjct: 142 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCG------YCSTVFDPF 195
Query: 353 LMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE---------VVRPHVARMR 403
L L + K P+V L + ++ F E V + +
Sbjct: 196 WDLSLPI----------AKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRGRKRCIKK 245
Query: 404 YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYD 463
+ + R PK ++LH++RF+++ K T VNFP+++L+L+++ EN + Y+
Sbjct: 246 FSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREF-----ASENTN-HAVYN 299
Query: 464 LIANIVHDGKPEGGFYRVFVQRKSEELW 491
L A H G GG Y + + W
Sbjct: 300 LYAVSNHSGTTMGGHYTAYCRSPGTGEW 327
>gi|328708865|ref|XP_003243820.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like
[Acyrthosiphon pisum]
Length = 792
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 135/334 (40%), Gaps = 80/334 (23%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFL-IPENYRHCKSP----LVHRFGDLTRKIWH- 246
GL N+ T ++N +Q L L +F+ I N+ + KS + F ++ + +W
Sbjct: 474 GLQNLGNTCYMNSILQCLSSTEDLVKYFINIYSNFTNYKSRTKGLVAKEFSNVIKNLWSQ 533
Query: 247 -ARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRN--------- 296
R F+ Q + + K F+ Q + EF++ LL+ LH DL
Sbjct: 534 SGRGFQSQQ-----FKDTIGEYKDMFKHYDQQDSHEFLTILLDWLHDDLNQPEDNRVILG 588
Query: 297 -------------TKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNI 343
TK N SII + F G+ K+T+S D EK +
Sbjct: 589 ASKETGEEDWGNWTKANNSIIQQLFYGQ-------QKSTVSC-DTCFEKS---------V 631
Query: 344 TTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF-DGETVTEVVRPHVARM 402
T E PFL L L LP E N + L + L+ + +GE++ P R
Sbjct: 632 TFE----PFLSLSLPLPS--------EGN---KCTLSDCLQLYLNGESICGWHCPKCKRN 676
Query: 403 R-----YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEK 457
R + RLP Y+I+H++RF+ N + K + V FP NL++ ++I E
Sbjct: 677 RDATKKLDIMRLPPYLIIHLKRFSSNGY---KKNSNVEFPKMNLDMSNFI-----NGLEH 728
Query: 458 LRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
KY L H G +GG Y + S W
Sbjct: 729 RNWKYYLYGVSNHSGSLDGGHYTASCFKNSINKW 762
>gi|28565285|ref|NP_741994.1| ubiquitin carboxyl-terminal hydrolase 2 isoform b [Homo sapiens]
gi|410045962|ref|XP_003952100.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Pan
troglodytes]
gi|24943173|gb|AAN65363.1|AF440755_1 ubiquitin specific protease 2b [Homo sapiens]
gi|119587888|gb|EAW67484.1| ubiquitin specific peptidase 2, isoform CRA_a [Homo sapiens]
gi|158257942|dbj|BAF84944.1| unnamed protein product [Homo sapiens]
gi|167887742|gb|ACA06096.1| ubiquitin carboxyl-terminal hydrolase 2 variant 2 [Homo sapiens]
Length = 396
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 132/328 (40%), Gaps = 52/328 (15%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R + + LV F L + IW
Sbjct: 58 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIW 117
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT----KKNT 301
+ VSP EF + + + RF Q + EF+ +LL+ LH+++ K N
Sbjct: 118 TSSP-NDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 175
Query: 302 SII---------YECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPF 352
+ + ++ LE + G +++ +D G T PF
Sbjct: 176 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCG------YCSTVFDPF 229
Query: 353 LMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE---------VVRPHVARMR 403
L L + K P+V L + ++ F E V + +
Sbjct: 230 WDLSLPIA----------KRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRGRKRCIKK 279
Query: 404 YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYD 463
+ + R PK ++LH++RF+++ K T VNFP+++L+L+++ EN + Y+
Sbjct: 280 FSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREF-----ASENTN-HAVYN 333
Query: 464 LIANIVHDGKPEGGFYRVFVQRKSEELW 491
L A H G GG Y + + W
Sbjct: 334 LYAVSNHSGTTMGGHYTAYCRSPGTGEW 361
>gi|195356149|ref|XP_002044543.1| GM11729 [Drosophila sechellia]
gi|194132165|gb|EDW53792.1| GM11729 [Drosophila sechellia]
Length = 1022
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 128/351 (36%), Gaps = 70/351 (19%)
Query: 175 LPDGYEINDPSLEDIRH--VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP 232
L DGY+ S ++ GL NI T F+N IQ L L F R +
Sbjct: 678 LDDGYKSASSSRDEKSEGLCGLRNIGNTCFMNSVIQCLSHTQELTRFLRSHHGSRSLSTK 737
Query: 233 ---LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNT 289
++H F L +++W + V+P E L+ + + Q + EF+ + L++
Sbjct: 738 DQQILHEFAKLIQEMWTSNVH--TVTPME-LKRAFSTKHRMYSDYNQQDAQEFLRFFLDS 794
Query: 290 LHSDLRN--------------------------TKKNTSIIYECFQGELEVVKEIPKNTI 323
LHS L + T+ S++ + F G+L K K T
Sbjct: 795 LHSALNSGVKGETLNIDDNLSDNKKADLTWEWYTRHENSLVRDLFVGQL---KSTLKCTT 851
Query: 324 SGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNIL 383
GN T + PF L + LP K + + LF
Sbjct: 852 CGN------------------TSVTFDPFWDLSVPLPSSSRCK------LDACLDLFIRE 887
Query: 384 KKFDGETVTEVVRPHVARM---RYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKN 440
+ DG+ + + R + + R PKY+++H++RF++ + K +V FP +
Sbjct: 888 EVLDGDEMPTCAKCKTRRKCTKSFTIQRFPKYLVIHLKRFSETRW--SKLSNIVEFPTSD 945
Query: 441 LELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
EL + + N Y L A H G GG Y + W
Sbjct: 946 SELN----MGSYGANSNSNVHYSLYAISNHMGSTAGGHYVALCKHPVSRKW 992
>gi|350407452|ref|XP_003488090.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Bombus
impatiens]
Length = 994
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 134/317 (42%), Gaps = 34/317 (10%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL--------IPENYRHCKSPLVHRFGDLTRK 243
GL N+ + ++N IQ L T L +F+ N + + +V + +
Sbjct: 659 TGLKNLGNSCYMNSIIQCLSNTTHLAKYFMDNLYADDLNTNNDNNTQGQVVEEVAQVIKA 718
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK---N 300
+W + +K +SPH+ AV + K +F Q + EF+++LL+ +H+DL+ K
Sbjct: 719 LWRGQ-YKS-ISPHDLKIAVGQY-KLQFESYEQQDSHEFLTFLLDWMHNDLKKNCKVPLE 775
Query: 301 TSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLP 360
++ + + ++ K I + G ++T S + T+ F L + LP
Sbjct: 776 MTVAEKAWDKAMDSQKSIISDLFFGQLRSTITCSFCKQ------SSTTYEMFNSLTMSLP 829
Query: 361 PP--PLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMR 418
D + K + Q K G + P A ++ +L +++H+
Sbjct: 830 HANRCTLNDCILKFVSGQ--------KVVGWKCPKCQTPREATKKFDFVKLAPIIVIHLN 881
Query: 419 RFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKEN-EKLRS---KYDLIANIVHDGKP 474
RF ++ ++EK T V+FP+ + LK Y+ + +RS Y L A H G
Sbjct: 882 RFAESGGWLEKRNTAVDFPLTDFNLKPYLVADSNSAAISNIRSYNYNYSLYAMSNHYGTM 941
Query: 475 EGGFYRVFVQRKSEELW 491
EGG Y F + ++ W
Sbjct: 942 EGGHYTAFCKNATQNKW 958
>gi|388454150|ref|NP_001252825.1| ubiquitin carboxyl-terminal hydrolase 2 [Macaca mulatta]
gi|355567137|gb|EHH23516.1| hypothetical protein EGK_06991 [Macaca mulatta]
gi|355752713|gb|EHH56833.1| hypothetical protein EGM_06315 [Macaca fascicularis]
gi|380789853|gb|AFE66802.1| ubiquitin carboxyl-terminal hydrolase 2 isoform a [Macaca mulatta]
Length = 605
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 130/322 (40%), Gaps = 40/322 (12%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R + + L+ F L + IW
Sbjct: 267 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHSSNAHTALMEEFAKLIQTIW 326
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-------RNTK 298
+ + VSP EF + + + RF Q + EF+ +LL+ LH+++ ++
Sbjct: 327 TS-SPNDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 384
Query: 299 KNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLD 358
+N + + +G K + + D + D T PF L L
Sbjct: 385 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 444
Query: 359 LPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---------TVTEVVRPHVARMRYRVTRL 409
+ K P+V L + ++ F E T ++ + R
Sbjct: 445 I----------AKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRF 494
Query: 410 PKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIV 469
PK ++LH++RF+++ K T VNFP+++L+L+++ EN + Y+L A
Sbjct: 495 PKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFA-----SENTN-HAVYNLYAVSN 548
Query: 470 HDGKPEGGFYRVFVQRKSEELW 491
H G GG Y + + W
Sbjct: 549 HSGTTMGGHYTAYCRSPGTGEW 570
>gi|301770087|ref|XP_002920465.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Ailuropoda melanoleuca]
Length = 373
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 137/325 (42%), Gaps = 42/325 (12%)
Query: 182 NDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPENYRHCKSPLVHRF 237
N P + + GL N+ T ++N +Q L ++PL +FL I + C S + F
Sbjct: 36 NRPHFQGV--TGLRNLGNTCYMNAILQCLGSISPLAEYFLSGKYITALQKDC-SEVATAF 92
Query: 238 GDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT 297
+ +W + VSP E ++ + + F Q + EF+ ++LN LH L+
Sbjct: 93 AYVMTDMWLGDS--ECVSP-EIFRSALGSLYPAFMKKTQQDAQEFLIYVLNELHEALKKY 149
Query: 298 KKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPF---LM 354
+ S G+ E V + I+ + +G ++ + + + +
Sbjct: 150 HRRRSY------GK-ESVPRCCRKVIANETSIITQLFEGQLNYSIMCLKCESCTYKNEVF 202
Query: 355 LGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVA--------RMRYRV 406
L LP P ++ ++ + F F +T+T + H + +R +
Sbjct: 203 TVLSLPIPSEYECYLQDCL----QCF-----FQQDTLTWNNQIHCSFCETKQETAVRASI 253
Query: 407 TRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIA 466
++ PK +I H++RF K T +++P+ NL+L +I P +++ KY+L A
Sbjct: 254 SKAPKIIIFHLKRFDILGTMKRKLRTDIHYPLTNLDLTPFI-CPVFRKH----PKYNLCA 308
Query: 467 NIVHDGKPEGGFYRVFVQRKSEELW 491
+ H G +GG Y F + + W
Sbjct: 309 VVNHFGDLDGGHYTAFCKNSVTQAW 333
>gi|195392830|ref|XP_002055057.1| GJ19166 [Drosophila virilis]
gi|194149567|gb|EDW65258.1| GJ19166 [Drosophila virilis]
Length = 938
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 125/351 (35%), Gaps = 72/351 (20%)
Query: 175 LPDGYE-INDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP- 232
L DGY+ D E + GL NI T F+N IQ L T L F +
Sbjct: 596 LDDGYKSTRDEKFEGL--CGLRNIGNTCFMNSVIQCLSHTTELTRFLRAHHTSTRTATSK 653
Query: 233 ---LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNT 289
++H F L +++W V+P E L+ + + Q + EF+ + L++
Sbjct: 654 DQQILHEFAKLIQEMWTTNVH--SVTPME-LKRAFSTKHRMYSDYNQQDAQEFLRFFLDS 710
Query: 290 LHSDLRN--------------------------TKKNTSIIYECFQGELEVVKEIPKNTI 323
LHS L + S+I + F G+L K K T
Sbjct: 711 LHSALNTGVKGETLNIDDNLSDNKKADLTWEWYARHENSLIRDLFVGQL---KSTLKCTT 767
Query: 324 SGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNIL 383
GN T + PF L + LP K + + LF
Sbjct: 768 CGN------------------TSVTFDPFWDLSVPLPSSSRCK------LEACLDLFIRE 803
Query: 384 KKFDGETVTEVVRPHVARM---RYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKN 440
+ DG+ + + R + + R PKY+++H++RF++ + K +V FP +
Sbjct: 804 EVLDGDEMPTCSKCKTRRKCTKSFTIQRFPKYLVIHLKRFSETRW--SKLSNIVEFPTAD 861
Query: 441 LELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
EL + + N Y L A H G GG Y + W
Sbjct: 862 RELN----MASYGANANSNVHYSLYAISNHMGSTAGGHYVALCKHPVSHKW 908
>gi|53987037|gb|AAV27298.1| poly-histidine-tagged Usp2-cc [Ubiquitin protease vector pHUsp2-cc]
Length = 378
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 131/336 (38%), Gaps = 68/336 (20%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR---HCKSP---LVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R H S L+ F L + IW
Sbjct: 40 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQTIW 99
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIY 305
+ VSP EF + + + RF Q + EF+ +LL+ LH+++
Sbjct: 100 TSSP-NDVVSPSEFKTQIQRYAP-RFMGYNQQDAQEFLRFLLDGLHNEVNRVAARP---- 153
Query: 306 ECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLG--------- 356
+ E + +P + EKG + + E SR+ L +G
Sbjct: 154 ---KASPETLDHLP---------DEEKGRQMWRKY--LEREDSRIGDLFVGQLKSSLTCT 199
Query: 357 ------------LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---------TVTEVV 395
DL P + K P+V L + ++ F E T
Sbjct: 200 DCGYCSTVFDPFWDLSLP------IAKRGYPEVTLMDCMRLFTKEDILDGDEKPTCCRCR 253
Query: 396 RPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKEN 455
++ V R PK ++LH++RF+++ K T VNFP+++L+L+++ EN
Sbjct: 254 ARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREF-----ASEN 308
Query: 456 EKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+ Y+L A H G GG Y + + W
Sbjct: 309 TN-HAVYNLYAVSNHSGTTMGGHYTAYCRSPVTGEW 343
>gi|334314734|ref|XP_001380549.2| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Monodelphis domestica]
Length = 370
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 124/315 (39%), Gaps = 41/315 (13%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCK---SPLVHRFGDLTRKIWHAR 248
GL N+ T ++N +Q L +TPL +FL + + F L +W
Sbjct: 42 TGLRNLGNTCYMNAILQCLCSITPLVEYFLSGKYITALQKDSGEAATAFAYLMTDMWLGD 101
Query: 249 NFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECF 308
+ VSP F A+ K F Q + EF+ ++LN LH L+ ++
Sbjct: 102 S--DCVSPEVFRTAIGKIYPT-FLKRTQQDAQEFLIYVLNELHEALKKYRRK-------- 150
Query: 309 QGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPF---LMLGLDLPPPPLF 365
+ +V + + S + +G ++D + + + + L LP P
Sbjct: 151 KPHEKVTTKCYRKVASSESSIITRLFEGQLNYDIVCLKCENCTYKNEVFTVLSLPIP--- 207
Query: 366 KDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVA--------RMRYRVTRLPKYMILHM 417
E ++ + F F +T+T + H A +R + + PK +I H+
Sbjct: 208 -SECECSLQECLGCF-----FQQDTLTWNNQIHCAFCESKQDAAVRASIAKAPKTVIFHL 261
Query: 418 RRFTKNNFFVEKNPTLVNFPVKNLELKDYI-PLPTPKENEKLRSKYDLIANIVHDGKPEG 476
+RF K T +++P+ NL+L YI PL + KY L + H G +G
Sbjct: 262 KRFDCQGRMKRKLRTDIHYPLNNLDLSPYIYPL------FRKHPKYSLCGVVNHFGDLDG 315
Query: 477 GFYRVFVQRKSEELW 491
G Y F + + W
Sbjct: 316 GHYTAFCKNTVSQTW 330
>gi|3386552|gb|AAC28393.1| ubiquitin-specific protease UBP41 [Mus musculus]
Length = 353
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 131/336 (38%), Gaps = 68/336 (20%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR---HCKSP---LVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R H S L+ F L + IW
Sbjct: 15 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQTIW 74
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIY 305
+ VSP EF + + + RF Q + EF+ +LL+ LH+++
Sbjct: 75 TSSP-NDVVSPSEFKTQIQRYAP-RFMGYNQQDAQEFLRFLLDGLHNEVNRVAARP---- 128
Query: 306 ECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLG--------- 356
+ E + +P + EKG + + E SR+ L +G
Sbjct: 129 ---KASPETLDHLP---------DEEKGRQMWRKY--LEREDSRIGDLFVGQLKSSLTCT 174
Query: 357 ------------LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---------TVTEVV 395
DL P + K P+V L + ++ F E T
Sbjct: 175 DCGYCSTVFDPFWDLSLP------IAKRGYPEVTLMDCMRLFTKEDILDGDEKPTCCRCR 228
Query: 396 RPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKEN 455
++ V R PK ++LH++RF+++ K T VNFP+++L+L+++ EN
Sbjct: 229 ARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREF-----ASEN 283
Query: 456 EKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+ Y+L A H G GG Y + + W
Sbjct: 284 TN-HAVYNLYAVSNHSGTTMGGHYTAYCRSPVTGEW 318
>gi|281349070|gb|EFB24654.1| hypothetical protein PANDA_011320 [Ailuropoda melanoleuca]
Length = 929
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 99/262 (37%), Gaps = 67/262 (25%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQ 148
R+ R CP+LD+V D +K C V NL +ACL C G Q
Sbjct: 17 RMAAFRNHCPHLDSVGEITKDDLIQKSHGTCQDCKVRGPNL--WACLENRCSYVGCGESQ 74
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRHV--------- 192
H+ HS E H++ +NL T +V+C E+ PSL +R +
Sbjct: 75 VDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRPLQQTQENSVQ 134
Query: 193 -------------------------------------GLNNIKETDFVNVTIQSLMRVTP 215
GL NI T ++N +Q+L P
Sbjct: 135 DFKIPSNTTLKTPLVAVFDDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPP 194
Query: 216 LRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
L FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 195 LTQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTTLFQGI-KTVNPTFRG 252
Query: 274 GVQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 253 YSQQDAQEFLRCLMDLLHEELK 274
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 591 KVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPVQ----IVTYDL 646
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 647 LSVICHHGTASSGHYIAYCRNNLNNLW 673
>gi|242024423|ref|XP_002432627.1| ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus
corporis]
gi|212518097|gb|EEB19889.1| ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus
corporis]
Length = 462
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 130/326 (39%), Gaps = 48/326 (14%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE-------NYRHCKSPLVHRFGDLTRKIW 245
GL NI T F+N +Q L PL + L E K L+ F ++ +++W
Sbjct: 123 GLKNIGNTCFMNSVLQCLSNTKPLLEYLLHEEYMTDINFTISAMKGSLIKAFSNVIQELW 182
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSII 304
A N + ++ ++ ++ RF Q + EF+ +LL LH D+ R T K I+
Sbjct: 183 -APNAEDKIINTTNFKSQIQKFAPRFMGYAQQDAQEFLRYLLEGLHEDVNRVTVKPQQIL 241
Query: 305 Y-------------ECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMP 351
E ++ L + + G ++T + + G H ++T + P
Sbjct: 242 TDIDDSLSDNQKATEAWKRYLRMDDSKVVDIFVGQLKSTLQCTVCG--HCSVTFD----P 295
Query: 352 FLMLGLDLPP---PPLFKDVMEKNIIPQVPLFNILKKFDGE---TVTEVVRPHVARMRYR 405
F L L +P P + ++ F + DGE T ++ +
Sbjct: 296 FWDLSLPVPSRTGQPKLQSCLDA--------FTKEEVLDGEEKPTCSKCETRRKCTKSFS 347
Query: 406 VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLI 465
+ + PK ++LH++RF+ + K V+FP+ NL+L Y N+ Y+L
Sbjct: 348 IQKFPKILVLHLKRFSPTERYRGKLSITVDFPLTNLDLSPY------AANKGQGCTYNLY 401
Query: 466 ANIVHDGKPEGGFYRVFVQRKSEELW 491
A H G GG Y + + W
Sbjct: 402 AISNHSGTAYGGHYTAYCKHPYSGNW 427
>gi|6573163|gb|AAF17574.1| ubiquitin specific processing protease [Rattus norvegicus]
Length = 618
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 132/340 (38%), Gaps = 76/340 (22%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR---HCKSP---LVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R H S L+ F L + IW
Sbjct: 280 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQTIW 339
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIY 305
+ + VSP EF + + + RF Q + EF+ +LL+ LH+
Sbjct: 340 TS-SPNDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHN------------- 384
Query: 306 ECFQGELEVVKEIPKNTISGNDQ--NTEKGSDGGDDHDNITTETSRMPFLMLG------- 356
E+ V PK + D + EKG + + E SR+ L +G
Sbjct: 385 -----EVNRVAARPKPSPESLDHLPDEEKGRQMWRKY--LEREDSRIGDLFVGQLKSSLT 437
Query: 357 ----------------LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---------TV 391
L LP + K P+V L + ++ F E T
Sbjct: 438 CTDCGYCSTVFDPFWDLSLP--------IAKRGYPEVTLMDCMRLFTKEDVLDGDEKPTC 489
Query: 392 TEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPT 451
++ V R PK ++LH++RF+++ K T VNFP+++L+L+++
Sbjct: 490 CRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFA---- 545
Query: 452 PKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
EN + Y+L A H G GG Y + + W
Sbjct: 546 -SENTN-HAVYNLYAVSNHSGTTMGGHYTAYCRSPVTGEW 583
>gi|81883550|sp|Q5U349.1|UBP2_RAT RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=41 kDa ubiquitin-specific protease; AltName:
Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2; AltName:
Full=Ubiquitin-specific-processing protease testis;
Short=UBP-t
gi|55250569|gb|AAH85719.1| Ubiquitin specific peptidase 2 [Rattus norvegicus]
gi|149041433|gb|EDL95274.1| ubiquitin specific peptidase 2, isoform CRA_a [Rattus norvegicus]
gi|149041435|gb|EDL95276.1| ubiquitin specific peptidase 2, isoform CRA_a [Rattus norvegicus]
Length = 618
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 132/340 (38%), Gaps = 76/340 (22%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR---HCKSP---LVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R H S L+ F L + IW
Sbjct: 280 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQTIW 339
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIY 305
+ + VSP EF + + + RF Q + EF+ +LL+ LH+
Sbjct: 340 TS-SPNDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHN------------- 384
Query: 306 ECFQGELEVVKEIPKNTISGNDQ--NTEKGSDGGDDHDNITTETSRMPFLMLG------- 356
E+ V PK + D + EKG + + E SR+ L +G
Sbjct: 385 -----EVNRVAARPKPSPESLDHLPDEEKGRQMWRKY--LEREDSRIGDLFVGQLKSSLT 437
Query: 357 ----------------LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---------TV 391
L LP + K P+V L + ++ F E T
Sbjct: 438 CTDCGYCSTVFDPFWDLSLP--------IAKRGYPEVTLMDCMRLFTKEDVLDGDEKPTC 489
Query: 392 TEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPT 451
++ V R PK ++LH++RF+++ K T VNFP+++L+L+++
Sbjct: 490 CRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFA---- 545
Query: 452 PKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
EN + Y+L A H G GG Y + + W
Sbjct: 546 -SENTN-HAVYNLYAVSNHSGTTMGGHYTAYCRSPVTGEW 583
>gi|51592088|ref|NP_446226.2| ubiquitin carboxyl-terminal hydrolase 2 [Rattus norvegicus]
gi|6492126|gb|AAF14190.1|AF106659_1 deubiquitinating enzyme Ubp69 [Rattus norvegicus]
Length = 618
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 132/340 (38%), Gaps = 76/340 (22%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR---HCKSP---LVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R H S L+ F L + IW
Sbjct: 280 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQTIW 339
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIY 305
+ + VSP EF + + + RF Q + EF+ +LL+ LH+
Sbjct: 340 TS-SPNDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHN------------- 384
Query: 306 ECFQGELEVVKEIPKNTISGNDQ--NTEKGSDGGDDHDNITTETSRMPFLMLG------- 356
E+ V PK + D + EKG + + E SR+ L +G
Sbjct: 385 -----EVNRVAARPKPSPESLDHLPDEEKGRQMWRKY--LEREDSRIGDLFVGQLKSSLT 437
Query: 357 ----------------LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---------TV 391
L LP + K P+V L + ++ F E T
Sbjct: 438 CTDCGYCSTVFDPFWDLSLP--------IAKRGYPEVTLMDCMRLFTKEDVLDGDEKPTC 489
Query: 392 TEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPT 451
++ V R PK ++LH++RF+++ K T VNFP+++L+L+++
Sbjct: 490 CRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFA---- 545
Query: 452 PKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
EN + Y+L A H G GG Y + + W
Sbjct: 546 -SENTN-HAVYNLYAVSNHSGTTMGGHYTAYCRSPVTGEW 583
>gi|291290972|ref|NP_001073699.2| ubiquitin specific peptidase 50 [Bos taurus]
Length = 378
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 136/327 (41%), Gaps = 42/327 (12%)
Query: 180 EINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPENYRHCKSPLVH 235
E N P L+ + GL N+ T ++N +Q L ++PL +FL I + C S +
Sbjct: 39 EENQPHLQGV--TGLRNLGNTCYMNAILQCLCSISPLVEYFLSGKYINALQKDC-SEVAT 95
Query: 236 RFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR 295
F + +W + VSP E ++ + F Q + EF+ ++LN LH L+
Sbjct: 96 AFAYVMTDMWLGDS--DCVSP-EIFRSALGNLYPVFMKKTQQDAQEFLIYVLNELHEALK 152
Query: 296 NTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPF--- 352
+ + E + + I+ + +G + + + +
Sbjct: 153 KYHRRKAY-------EKRSIPRCCRKMIANESSIITRLFEGQLSYSIVCLKCENCTYKNE 205
Query: 353 LMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHV--------ARMRY 404
+ + LP P ++ ++ + F F +T+T + H A +R
Sbjct: 206 VFTIISLPIPSEYECSLQDCL----QCF-----FQQDTLTWNNQIHCSFCETKQEAAVRA 256
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
++++PK ++ H++RF K T +++P+ NL+L YI P +++ KY+L
Sbjct: 257 TISKVPKTIVFHLKRFDILGTMKRKLRTDIHYPLTNLDLTPYI-CPIFRKH----PKYNL 311
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
A + H G +GG Y F + + W
Sbjct: 312 CAVVNHFGDLDGGHYTAFSKNSVTQAW 338
>gi|301773886|ref|XP_002922367.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like
[Ailuropoda melanoleuca]
Length = 932
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 99/262 (37%), Gaps = 67/262 (25%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQ 148
R+ R CP+LD+V D +K C V NL +ACL C G Q
Sbjct: 28 RMAAFRNHCPHLDSVGEITKDDLIQKSHGTCQDCKVRGPNL--WACLENRCSYVGCGESQ 85
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRHV--------- 192
H+ HS E H++ +NL T +V+C E+ PSL +R +
Sbjct: 86 VDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRPLQQTQENSVQ 145
Query: 193 -------------------------------------GLNNIKETDFVNVTIQSLMRVTP 215
GL NI T ++N +Q+L P
Sbjct: 146 DFKIPSNTTLKTPLVAVFDDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPP 205
Query: 216 LRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
L FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 206 LTQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTTLFQGI-KTVNPTFRG 263
Query: 274 GVQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 264 YSQQDAQEFLRCLMDLLHEELK 285
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 594 KVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPVQ----IVTYDL 649
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 650 LSVICHHGTASSGHYIAYCRNNLNNLW 676
>gi|320165971|gb|EFW42870.1| DUB1 [Capsaspora owczarzaki ATCC 30864]
Length = 495
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 127/305 (41%), Gaps = 36/305 (11%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKG 252
GL+N+ T F+N +Q L PL ++ L + + C+ P + +L + I A +G
Sbjct: 206 GLSNMGNTCFLNSVLQCLTYTPPLASYALSGAHSQACRLPEICMCCELEQHIRRALVHRG 265
Query: 253 QVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGEL 312
++P ++ + K FR+G Q + EF+ L+ ++ I + F GE
Sbjct: 266 NIAPKPIIRQLRKIGS--FRLGHQEDAHEFLRCLMESVQQS----------ILKSFGGEK 313
Query: 313 EVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKN 372
+ + + T+ S + ++T FL L LD+ D + K
Sbjct: 314 RIAHRVQETTLVHQMLGGYSNSRVHCTNCKANSDTYEA-FLDLSLDIGNCASVADALAK- 371
Query: 373 IIPQVPLFNILKKFD--GETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKN 430
+ ++++ + + R A + + R P + LH++RF F+ +
Sbjct: 372 -------YTVIERLEKNAYNCEKCKRKVTATKQTSIHRAPNVLSLHLKRFD----FLRSH 420
Query: 431 PTLVNFPVK---NLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKP-EGGFYRVFVQRK 486
+N P++ L+L ++ P++N +Y L A +VH G G Y +V R
Sbjct: 421 NAKINRPIRFDEELDLSPFMSKGLPQQN----LRYRLYAVLVHAGHSCHSGHYYCYV-RN 475
Query: 487 SEELW 491
S+ W
Sbjct: 476 SDNQW 480
>gi|348521962|ref|XP_003448495.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like
[Oreochromis niloticus]
Length = 911
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 98/251 (39%), Gaps = 61/251 (24%)
Query: 104 DCPYLDTVNR----QVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQK--SHAYTHSL 157
DCP+LD V +++ + + N++ACL G Y G G+ H+ HS
Sbjct: 8 DCPHLDCVGEITKEELIQKSHGQCQDCKVGGPNLWACLENGCAYVGCGESHTDHSTVHSQ 67
Query: 158 EAGHHVYINLRTEKVYCLPDGYEI----------------------ND------------ 183
+ H++ +NL T +V+C G E+ ND
Sbjct: 68 DTRHNLTVNLTTLRVWCYACGKEVFLERKLGPHSPHGNSKPLPLPQNDGNKAPGSPTSLR 127
Query: 184 -PS---LEDIRH-------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY 226
PS EDI GL NI T ++N +Q+L PL FFL
Sbjct: 128 VPSNGGCEDIDMETEEEDEIRARGLTGLKNIGNTCYMNAALQALSNCPPLTQFFLECGGL 187
Query: 227 -RHCKSP-LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMS 284
R K P L + L +WH +N V P Q + KA FR Q + EF+
Sbjct: 188 VRTDKKPALCKSYQKLVSDLWH-KNRPSYVVPTNLFQGI-KAINPMFRGYAQQDSQEFLR 245
Query: 285 WLLNTLHSDLR 295
L++ LH +L+
Sbjct: 246 CLMDQLHEELK 256
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
++ LP+ + +H++RF F K T V+FP++ L+L+ ++ K++ + YDL
Sbjct: 573 KMQSLPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFL----AKDSSAQTTSYDL 628
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 629 LSVICHHGTASNGHYIAYCRNDVNNLW 655
>gi|226480822|emb|CAX73508.1| Ubiquitin carboxyl-terminal hydrolase 2 [Schistosoma japonicum]
Length = 496
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 128/313 (40%), Gaps = 43/313 (13%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNF-----FLIPENYRHCKSPLVHR-FGDLTRKIW 245
VGLNN+ T F+N +Q L PL + +L N + ++ R + DL ++IW
Sbjct: 160 VGLNNLGNTCFMNSILQCLSNTAPLTEYCLEDRYLKDINKSSSMNGMLFRSYADLMKEIW 219
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKN---TS 302
SP F + + + RF Q + EF+ ++L LH ++ +K T
Sbjct: 220 DPDMANSSTSPSRFKSQIQRFA-PRFMGYSQQDSQEFLRYVLEGLHMEVNRVQKRPIPTK 278
Query: 303 IIYEC-------------FQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSR 349
YE ++ L + + G +T + +D T+
Sbjct: 279 PDYEAEDRLPDNEKANLYWRRYLSMDNSEIVDLFVGQLMSTLECADCS------FKSTTF 332
Query: 350 MPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVAR---MRYRV 406
PF L L +P P NI+ + LF ++ DG+ R R + +
Sbjct: 333 DPFWDLSLPIPKKP------NVNILDCLNLFTSKEELDGDERAICSRCKTRRRCTKSFSI 386
Query: 407 TRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIA 466
+ P+ ++LH++RF+ F K +V++P++NL+L I T +K ++Y L A
Sbjct: 387 QKFPQILVLHLKRFSGER-FRSKMSVMVDYPLRNLDL---IEFATSSCTQK-SAQYKLYA 441
Query: 467 NIVHDGKPEGGFY 479
H G G Y
Sbjct: 442 VSNHSGSVYTGHY 454
>gi|7670525|dbj|BAA95110.1| unnamed protein product [Mus musculus]
Length = 393
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 131/336 (38%), Gaps = 68/336 (20%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR---HCKSP---LVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R H S L+ F L + IW
Sbjct: 55 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQTIW 114
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIY 305
+ VSP EF + + + RF Q + EF+ +LL+ LH+++
Sbjct: 115 TSSP-NDVVSPSEFKTQIQRYAP-RFMGYNQQDAQEFLRFLLDGLHNEVNRVAARP---- 168
Query: 306 ECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLG--------- 356
+ E + +P + EKG + + E SR+ L +G
Sbjct: 169 ---KASPETLDHLP---------DEEKGRQMWRKY--LEREDSRIGDLFVGQLKSSLTCT 214
Query: 357 ------------LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---------TVTEVV 395
DL P + K P+V L + ++ F E T
Sbjct: 215 DCGYCSTVFDPFWDLSLP------IAKRGYPEVTLMDCMRLFTKEDILDGDEKPTCCRCR 268
Query: 396 RPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKEN 455
++ V R PK ++LH++RF+++ K T VNFP+++L+L+++ EN
Sbjct: 269 ARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREF-----ASEN 323
Query: 456 EKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+ Y+L A H G GG Y + + W
Sbjct: 324 TN-HAVYNLYAVSNHSGTTMGGHYTAYCRSPVTGEW 358
>gi|16552833|dbj|BAB71388.1| unnamed protein product [Homo sapiens]
Length = 605
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 131/332 (39%), Gaps = 60/332 (18%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R + + LV F L + IW
Sbjct: 267 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIW 326
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSD------------ 293
+ + VSP EF + + + RF Q + EF+ +LL+ LH++
Sbjct: 327 TS-SPNDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 384
Query: 294 -----LRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETS 348
L + +K + + + E + ++ + G+ T+ G T
Sbjct: 385 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKGSLTCTDCG----------YCSTV 434
Query: 349 RMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---------TVTEVVRPHV 399
PF L L + K P+V L + ++ F E T
Sbjct: 435 FDPFWDLSLPI----------AKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRGRKR 484
Query: 400 ARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLR 459
++ + R PK ++L ++RF+++ K T VNFP+++L+L+++ EN
Sbjct: 485 CIKKFSIQRFPKILVLRLKRFSESRIRTSKLTTFVNFPLRDLDLREFA-----SENTN-H 538
Query: 460 SKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+ Y+L A H G GG Y + + W
Sbjct: 539 AVYNLYAVSNHSGTTMGGHYTAYCRSPGTGEW 570
>gi|256081222|ref|XP_002576871.1| ubiquitin-specific peptidase 8 (C19 family) [Schistosoma mansoni]
Length = 1027
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 138/334 (41%), Gaps = 40/334 (11%)
Query: 182 NDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFL--------IPENYRHCKSPL 233
N+ ++ R GL N+ T ++N +QSL L ++FL + N +
Sbjct: 666 NNQAIHQTRTNGLRNLGNTCYINSVVQSLSHTRALVHYFLDGFHERQAVVSNRLGYGGEI 725
Query: 234 VHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSD 293
V F L +++ N ++ ++F AV K K F Q + +EF+ +LL+ LH D
Sbjct: 726 VKHFEMLLSALYNQPNQDAEL--YKFRSAVAKHQSK-FSSNDQQDSLEFLLFLLDGLHED 782
Query: 294 LRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFL 353
L KKN + +L+ + + + T S N+Q E D +N +S L
Sbjct: 783 LNEVKKNNN------STKLKHNESMIEYT-SSNEQ-AEAAWIQHKDFNNSIIVSSFQGLL 834
Query: 354 MLGLDLPPPPLFKDVMEKNIIPQVP-------LFNILKKF-DGETVTEVVRPHVARMRYR 405
+ + + ++ +P L + LK F + E + R H R
Sbjct: 835 RSTVKCNSCHVTSTTFDVFMVLSLPIEQNKCQLTDCLKLFLEKEEMVGQCRWHCPSCNTR 894
Query: 406 --------VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEK 457
+ +LP Y+I+H++RF K T V+FP++ L++ +I P +E
Sbjct: 895 RDASKWIELWKLPTYLIIHLKRFRYEYGNWRKQTTNVDFPIECLDMSSFIVGPKLHSSE- 953
Query: 458 LRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y L + + H G E G Y F + + W
Sbjct: 954 ----YALYSVLNHRGTMESGHYTTFCRNIRDGRW 983
>gi|37674279|ref|NP_932759.1| ubiquitin carboxyl-terminal hydrolase 2 isoform Usp2-45 [Mus
musculus]
gi|34874871|gb|AAQ83301.1| deubiquitinating enzyme Usp2-45 [Mus musculus]
gi|148693614|gb|EDL25561.1| ubiquitin specific peptidase 2, isoform CRA_b [Mus musculus]
Length = 396
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 131/336 (38%), Gaps = 68/336 (20%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR---HCKSP---LVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R H S L+ F L + IW
Sbjct: 58 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQTIW 117
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIY 305
+ VSP EF + + + RF Q + EF+ +LL+ LH+++
Sbjct: 118 TSSP-NDVVSPSEFKTQIQRYAP-RFMGYNQQDAQEFLRFLLDGLHNEVNRVAARP---- 171
Query: 306 ECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLG--------- 356
+ E + +P + EKG + + E SR+ L +G
Sbjct: 172 ---KASPETLDHLP---------DEEKGRQMWRKY--LEREDSRIGDLFVGQLKSSLTCT 217
Query: 357 ------------LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---------TVTEVV 395
DL P + K P+V L + ++ F E T
Sbjct: 218 DCGYCSTVFDPFWDLSLP------IAKRGYPEVTLMDCMRLFTKEDILDGDEKPTCCRCR 271
Query: 396 RPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKEN 455
++ V R PK ++LH++RF+++ K T VNFP+++L+L+++ EN
Sbjct: 272 ARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFA-----SEN 326
Query: 456 EKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+ Y+L A H G GG Y + + W
Sbjct: 327 TN-HAVYNLYAVSNHSGTTMGGHYTAYCRSPVTGEW 361
>gi|194212776|ref|XP_001501250.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Equus
caballus]
Length = 606
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 130/322 (40%), Gaps = 40/322 (12%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R + + L+ F L + IW
Sbjct: 268 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSNAHTALMEEFAKLIQTIW 327
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-------RNTK 298
+ + VSP EF + + + RF Q + EF+ +LL+ LH+++ ++
Sbjct: 328 TS-SPNDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKSNP 385
Query: 299 KNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLD 358
+N + + +G K + + D + D T PF L L
Sbjct: 386 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 445
Query: 359 LPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---------TVTEVVRPHVARMRYRVTRL 409
+ K P+V L + ++ F E T ++ + R
Sbjct: 446 I----------AKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRARKRCIKKFSIQRF 495
Query: 410 PKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIV 469
PK ++LH++RF+++ K T VNFP+++L+L+++ EN + Y+L A
Sbjct: 496 PKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFA-----SENTN-HAVYNLYAVSN 549
Query: 470 HDGKPEGGFYRVFVQRKSEELW 491
H G GG Y + + W
Sbjct: 550 HSGTTMGGHYTAYCRSPVTGEW 571
>gi|114053169|ref|NP_001039728.1| ubiquitin carboxyl-terminal hydrolase 2 [Bos taurus]
gi|122135912|sp|Q2KHV7.1|UBP2_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=41 kDa ubiquitin-specific protease; AltName:
Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2
gi|86438174|gb|AAI12867.1| Ubiquitin specific peptidase 2 [Bos taurus]
gi|296480118|tpg|DAA22233.1| TPA: ubiquitin specific peptidase 2 [Bos taurus]
gi|440904915|gb|ELR55367.1| Ubiquitin carboxyl-terminal hydrolase 2 [Bos grunniens mutus]
Length = 606
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 131/328 (39%), Gaps = 52/328 (15%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R + L+ F L + IW
Sbjct: 268 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLSHSSRAHTALMEEFAKLIQTIW 327
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT----KKNT 301
+ + VSP EF + + + RF Q + EF+ +LL+ LH+++ K NT
Sbjct: 328 TS-SPNDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHNEVNRVIARPKSNT 385
Query: 302 SII---------YECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPF 352
+ + ++ LE + G +++ +D G T PF
Sbjct: 386 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCG------YCSTVFDPF 439
Query: 353 LMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---------TVTEVVRPHVARMR 403
L L + K P+V L + ++ F E T +
Sbjct: 440 WDLSLPI----------TKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRARKRCIKK 489
Query: 404 YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYD 463
+ + R PK ++LH++RF+++ K VNFP+++L+L+++ EN + Y+
Sbjct: 490 FSIQRFPKILVLHLKRFSESRIRTSKLTAFVNFPLRDLDLREFA-----SENTN-HAVYN 543
Query: 464 LIANIVHDGKPEGGFYRVFVQRKSEELW 491
L A H G GG Y + + W
Sbjct: 544 LYAVSNHSGTTMGGHYTAYCRSPVTGEW 571
>gi|58259279|ref|XP_567052.1| ubiquitin-specific protease [Cryptococcus neoformans var. neoformans
JEC21]
gi|134107425|ref|XP_777597.1| hypothetical protein CNBA7180 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260291|gb|EAL22950.1| hypothetical protein CNBA7180 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223189|gb|AAW41233.1| ubiquitin-specific protease, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1312
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 134/338 (39%), Gaps = 45/338 (13%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI--------PENYRHCKSPLVHRFGDLTRK 243
GL N+ T ++N TIQ L P FFL EN K L + +L R
Sbjct: 951 TGLKNLGNTCYMNSTIQCLSATYPFSTFFLDGTFARSINKENPLGTKGELAKAWAELLRV 1010
Query: 244 IWHAR-NFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTS 302
+W + F +SP F + + + + F Q + EF+S++L+ LH DL K+
Sbjct: 1011 LWSEKYEF---LSPMTFRKQITHFAPQ-FLGSDQHDSQEFLSFVLDGLHEDLNRVKRKPP 1066
Query: 303 IIYECFQGELEVVKEIPKNTISGNDQNTEKGSDG--------GDDHDNITT----ETSRM 350
+ + E +++ P S + + + G + + +TS
Sbjct: 1067 PVEMTPEREA-MLESAPPEVASEREWAIYRQRNDSLIVDLFQGQYRNRLECLTCHKTSTT 1125
Query: 351 PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLP 410
+ + LP P V+ + +I + +++K + A + RLP
Sbjct: 1126 YDAFMYMSLPVPSGKTKVVIQELIDEFVKAEVMEKENAWYCPRCKTNRRASKTLTIARLP 1185
Query: 411 KYMILHMRRFT-KNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRS--------- 460
+++ ++RFT ++ F +K+ T V FP++ L+L Y+P P R
Sbjct: 1186 PVLLIQLKRFTTRDGLFWDKSETPVIFPIRGLDLTRYLPGPAGSSIGSGRQVGPDGTFDP 1245
Query: 461 -------KYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
KYDL H G G Y FV KS+E W
Sbjct: 1246 RAQVGPFKYDLYGVSNHMGTLSSGHYTAFV--KSKEGW 1281
>gi|395503246|ref|XP_003755981.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
isoform 2 [Sarcophilus harrisii]
Length = 371
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 124/315 (39%), Gaps = 40/315 (12%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCK---SPLVHRFGDLTRKIWHAR 248
GL N+ T ++N +Q L +TPL +FL + + F L +W
Sbjct: 42 TGLRNLGNTCYMNAILQCLCSITPLVEYFLSGKYITALQKDSGEAATAFAYLMTDMWLGD 101
Query: 249 NFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECF 308
+ VSP F A+ K F Q + EF+ ++LN LH L+ ++ +
Sbjct: 102 S--DCVSPEVFRAAIGKIYPA-FLKRTQQDAQEFLIYVLNELHEALKKYRRKKT------ 152
Query: 309 QGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPF---LMLGLDLPPPPLF 365
E + + + S + +G ++D + + + + L LP P
Sbjct: 153 -QENGLSTKCYRKVASSESSIITRLFEGQLNYDIVCLKCENCTYKNEVFTVLSLPIP--- 208
Query: 366 KDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVA--------RMRYRVTRLPKYMILHM 417
E ++ + F F +T+T + H A +R + + PK +I H+
Sbjct: 209 -SECECSLQECLGCF-----FQQDTLTWNNQIHCAFCESKQDAAVRASIAKAPKTVIFHL 262
Query: 418 RRFTKNNFFVEKNPTLVNFPVKNLELKDYI-PLPTPKENEKLRSKYDLIANIVHDGKPEG 476
+RF K T +++P+ NL+L YI PL + KY L + H G +G
Sbjct: 263 KRFDCQGRVKRKLRTDIHYPLNNLDLSPYIYPL------FRKHPKYSLCGVVNHFGDLDG 316
Query: 477 GFYRVFVQRKSEELW 491
G Y F + + W
Sbjct: 317 GHYTAFCKNTVNQTW 331
>gi|195568052|ref|XP_002107569.1| GD17542 [Drosophila simulans]
gi|194204979|gb|EDX18555.1| GD17542 [Drosophila simulans]
Length = 398
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 127/351 (36%), Gaps = 70/351 (19%)
Query: 175 LPDGYEINDPSLEDIRH--VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP 232
L DGY+ S ++ GL NI T F+N IQ L L F R +
Sbjct: 54 LDDGYKSASSSRDEKSEGLCGLRNIGNTCFMNSVIQCLSHTQELTRFLRSHHGSRSLSTK 113
Query: 233 ---LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNT 289
++H F L ++W + V+P E L+ + + Q + EF+ + L++
Sbjct: 114 DQQILHEFAKLIHEMWTSN--VHTVTPME-LKRAFSTKHRMYSDYNQQDAQEFLRFFLDS 170
Query: 290 LHSDLRN--------------------------TKKNTSIIYECFQGELEVVKEIPKNTI 323
LHS L + T+ S++ + F G+L K K T
Sbjct: 171 LHSALNSGVKGETLNIDDNLSDNKKADLTWEWYTRHENSLVRDLFVGQL---KSTLKCTT 227
Query: 324 SGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNIL 383
GN T + PF L + LP K + + LF
Sbjct: 228 CGN------------------TSVTFDPFWDLSVPLPSSSRCK------LDACLDLFIRE 263
Query: 384 KKFDGETVTEVVRPHVARM---RYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKN 440
+ DG+ + + R + + R PKY+++H++RF++ + K +V FP +
Sbjct: 264 EVLDGDEMPTCAKCKTRRKCTKSFTIQRFPKYLVIHLKRFSETRW--SKLSNIVEFPTSD 321
Query: 441 LELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
EL + + N Y L A H G GG Y + W
Sbjct: 322 SELN----MGSYGANSNSNVHYSLYAISNHMGSTAGGHYVALCKHPVSRKW 368
>gi|397515506|ref|XP_003827991.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 3 [Pan paniscus]
Length = 501
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 112/275 (40%), Gaps = 40/275 (14%)
Query: 233 LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHS 292
LV F +W + SP V K FR Q + EFM +LL+ LH
Sbjct: 199 LVEEFRKTLCALWQGS--QTAFSPESLFYVVWKI-MPNFRGYQQQDAHEFMRYLLDHLHL 255
Query: 293 DLR---NTKKNTSIIYE----------CFQGELEVVKEIPKNTISGNDQNTEKGSDGGDD 339
+L+ N ++I+ E C G VV I G QN G
Sbjct: 256 ELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAI----FGGILQNEVNCLICG-- 309
Query: 340 HDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF-DGETV--TEVV 395
TE+ + PFL L LD+P K + P L + L+ F D E + TE+
Sbjct: 310 -----TESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELY 364
Query: 396 RPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPL 449
H + + + + +LPK + LH++RF + K T V FP++ L++K Y L
Sbjct: 365 MCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY--L 422
Query: 450 PTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
P+ + YDL A +VH G G G Y +
Sbjct: 423 LEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYA 457
>gi|395848444|ref|XP_003796860.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Otolemur
garnettii]
Length = 606
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 129/322 (40%), Gaps = 40/322 (12%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R + L+ F L + IW
Sbjct: 268 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHGSSAHTALMEEFAKLIQTIW 327
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-------RNTK 298
+ + VSP EF + + + RF Q + EF+ +LL+ LH+++ ++
Sbjct: 328 TS-SPNDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHNEVNRVAPRPKSNP 385
Query: 299 KNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLD 358
+N + + +G K + + D + D T PF L L
Sbjct: 386 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 445
Query: 359 LPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---------TVTEVVRPHVARMRYRVTRL 409
+ K P+V L + ++ F E T ++ + R
Sbjct: 446 I----------AKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRARKRCIKKFSIQRF 495
Query: 410 PKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIV 469
PK ++LH++RF+++ K T VNFP+++L+L+++ EN + Y+L A
Sbjct: 496 PKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFA-----SENTN-HAVYNLYAVSN 549
Query: 470 HDGKPEGGFYRVFVQRKSEELW 491
H G GG Y + + W
Sbjct: 550 HSGTTMGGHYTAYCRSPVTGEW 571
>gi|260166690|ref|NP_083439.2| putative ubiquitin carboxyl-terminal hydrolase 50 [Mus musculus]
gi|81892336|sp|Q6P8X6.1|UBP50_MOUSE RecName: Full=Putative ubiquitin carboxyl-terminal hydrolase 50;
AltName: Full=Deubiquitinating enzyme 50; AltName:
Full=Ubiquitin thioesterase 50; AltName:
Full=Ubiquitin-specific-processing protease 50
gi|38174591|gb|AAH61020.1| Ubiquitin specific peptidase 50 [Mus musculus]
gi|148696219|gb|EDL28166.1| ubiquitin specific peptidase 50, isoform CRA_a [Mus musculus]
Length = 390
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 131/331 (39%), Gaps = 72/331 (21%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPENYRHCKSPLVHRFGDLTRKIWHA 247
GL N+ T ++N +Q L V+PL +FL I + C S + F L +W
Sbjct: 45 TGLRNLGNTCYMNAILQCLCSVSPLVEYFLSGKYITALKKDC-SEVTTAFAYLMTDMWLG 103
Query: 248 RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR-------NTKKN 300
+ VSP FL AV + F Q + EF+ ++LN LH L+ N K+
Sbjct: 104 DS--DCVSPEIFLSAV-GSLYPAFLKKTQQDAQEFLIYVLNELHEALKKHCRRRVNEKRT 160
Query: 301 ------------TSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETS 348
TSII F+G+L T + T K
Sbjct: 161 GQSCCRKVPAQETSIITRLFEGQLSY-----SITCLKCESCTHKNE-------------- 201
Query: 349 RMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHV--------A 400
F +L L +P E ++ + F F +T+T + + A
Sbjct: 202 --VFTILSLPIPSD------YECSLQDCLQCF-----FQQDTLTWSNQIYCSFCEIKQEA 248
Query: 401 RMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRS 460
+R ++++PK ++ H +RF K T +++P+ NL+L YI P +++
Sbjct: 249 AVRTTISKVPKIIVFHFKRFDIQGTVKRKLRTDIHYPLTNLDLTPYI-CPVFRKHP---- 303
Query: 461 KYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+L A + H G +GG Y F + + W
Sbjct: 304 MYNLCAVVNHFGDLDGGHYTAFCKNSVTQAW 334
>gi|417403199|gb|JAA48417.1| Putative ubiquitin carboxyl-terminal hydrolase 2 [Desmodus
rotundus]
Length = 602
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 133/322 (41%), Gaps = 40/322 (12%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R + + L+ F L + IW
Sbjct: 264 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSNAHTALMEEFAKLIQTIW 323
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-------RNTK 298
+ + VSP EF + + + RF Q + EF+ +LL+ LH+ + ++
Sbjct: 324 TS-SLNDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHNAVNRVTVRPKSNP 381
Query: 299 KNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLD 358
+N + + +G K + + D + D T PF L L
Sbjct: 382 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 441
Query: 359 LPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEV-VRPHVARM--------RYRVTRL 409
+ K P+V L + ++ F E V + +P R ++ + R
Sbjct: 442 I----------AKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRTRKRCIKKFSIQRF 491
Query: 410 PKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIV 469
PK ++LH++RF+++ K T VNFP+++L+L+++ T N + Y+L A
Sbjct: 492 PKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFASETT---NHAV---YNLYAVSN 545
Query: 470 HDGKPEGGFYRVFVQRKSEELW 491
H G GG Y + + W
Sbjct: 546 HSGTTVGGHYTAYCRSPVTGEW 567
>gi|348574067|ref|XP_003472812.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 1
[Cavia porcellus]
Length = 611
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 130/322 (40%), Gaps = 40/322 (12%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL---IPENYRHCKS---PLVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L + H S L+ F L + IW
Sbjct: 273 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHTSSVHTGLMEEFAKLIQTIW 332
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-------RNTK 298
+ VSP EF + + + RF Q + EF+ +LL+ LH+++ +++
Sbjct: 333 TSCP-NDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHNEVNRVAVRPKSSH 390
Query: 299 KNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLD 358
+N + + +G K + + D + D T PF L L
Sbjct: 391 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 450
Query: 359 LPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---------TVTEVVRPHVARMRYRVTRL 409
+ K P+V L + ++ F E T ++ + R
Sbjct: 451 I----------AKRGYPEVTLMDCMRLFTKEDILDGDEKPTCCRCRARKRCIKKFSIQRF 500
Query: 410 PKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIV 469
PK ++LH++RF+++ K T VNFP+++L+L+++ EN + Y+L A
Sbjct: 501 PKILVLHLKRFSESRIRTSKLSTFVNFPLRDLDLREFA-----SENTN-HAVYNLYAVSN 554
Query: 470 HDGKPEGGFYRVFVQRKSEELW 491
H G GG Y + + W
Sbjct: 555 HSGTTMGGHYTAYCRSPVTGEW 576
>gi|354471307|ref|XP_003497884.1| PREDICTED: LOW QUALITY PROTEIN: putative ubiquitin
carboxyl-terminal hydrolase 50-like [Cricetulus griseus]
Length = 450
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 133/331 (40%), Gaps = 72/331 (21%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPENYRHCKSPLVHRFGDLTRKIWHA 247
GL N+ T ++N +Q L ++PL +FL I + C S + F L +W
Sbjct: 69 TGLRNLGNTCYMNAILQCLCNISPLVEYFLSGKYITALQKDC-SEVTTAFAYLMTDMWLG 127
Query: 248 RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-----------RN 296
+ VSP FL A + + F Q + EF+ ++LN LH L R+
Sbjct: 128 DS--DCVSPEIFLSA-LGSLYPAFLKKTQQDAQEFLIYVLNELHEALKKHCRRRAYERRS 184
Query: 297 TKK--------NTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETS 348
++K TSII F+G+L K +N T +
Sbjct: 185 SQKCCRKVMASETSIITRLFEGQLNYSITCLKC-------------------ENCTYKNE 225
Query: 349 RMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVA-------- 400
+ L LP P ++ ++ + F F +T+T + H +
Sbjct: 226 ----VFTVLSLPIPSEYECSLQDCL----QCF-----FQQDTLTWNNQIHCSFCEIKQET 272
Query: 401 RMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRS 460
+R +++ PK ++ H++RF K T + +P+ NL++ YI P +++
Sbjct: 273 AVRATISKAPKIIVFHLKRFDIQGSVKRKLRTDIRYPLTNLDITPYI-CPVFRKHP---- 327
Query: 461 KYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
KY+L A + H G +GG Y F + + W
Sbjct: 328 KYNLCAVVNHFGDLDGGHYTAFCKNSVTQAW 358
>gi|148693613|gb|EDL25560.1| ubiquitin specific peptidase 2, isoform CRA_a [Mus musculus]
Length = 411
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 124/322 (38%), Gaps = 40/322 (12%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR---HCKSP---LVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R H S L+ F L + IW
Sbjct: 73 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQTIW 132
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIY 305
+ VSP EF + + + RF Q + EF+ +LL+ LH+++
Sbjct: 133 TSSP-NDVVSPSEFKTQIQRYAP-RFMGYNQQDAQEFLRFLLDGLHNEVNRVAARPKASP 190
Query: 306 ECF-------QGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLD 358
E +G K + + D + D T PF L L
Sbjct: 191 ETLDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 250
Query: 359 LPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---------TVTEVVRPHVARMRYRVTRL 409
+ K P+V L + ++ F E T ++ V R
Sbjct: 251 I----------AKRGYPEVTLMDCMRLFTKEDILDGDEKPTCCRCRARKRCIKKFSVQRF 300
Query: 410 PKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIV 469
PK ++LH++RF+++ K T VNFP+++L+L+++ EN + Y+L A
Sbjct: 301 PKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFA-----SENTN-HAVYNLYAVSN 354
Query: 470 HDGKPEGGFYRVFVQRKSEELW 491
H G GG Y + + W
Sbjct: 355 HSGTTMGGHYTAYCRSPVTGEW 376
>gi|410924033|ref|XP_003975486.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like [Takifugu
rubripes]
Length = 909
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 95/254 (37%), Gaps = 64/254 (25%)
Query: 104 DCPYLDTVNR----QVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQK--SHAYTHSL 157
DCP+LD V +++ + + N++ACL G Y G G+ H+ HS
Sbjct: 8 DCPHLDCVGEVTKEELIQKSHGQCQDCKVGGPNLWACLENGCMYVGCGESHADHSTVHSQ 67
Query: 158 EAGHHVYINLRTEKVYCLPDGYEI---------------------NDPSLEDIRHV---- 192
E H++ +NL T +V+C E+ DP +D R
Sbjct: 68 ETRHNLTVNLTTLRVWCYACSKEVFLERKLGPHSLHVSGEVLPSPKDPGQDDNRMARSPT 127
Query: 193 -----------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFL-I 222
GL NI T ++N +Q+L PL FFL
Sbjct: 128 SLKVSTSGACEDVDMETEEEDDLRAKGLTGLKNIGNTCYMNAALQALSNCPPLTQFFLEC 187
Query: 223 PENYRHCKSP-LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVE 281
R K P L + L +WH +N V P Q + KA FR Q + E
Sbjct: 188 GGMVRTDKKPALCKSYQKLVSDLWH-KNRSSYVVPTNLFQGI-KAINPMFRGYSQQDSQE 245
Query: 282 FMSWLLNTLHSDLR 295
F+ L++ LH +L+
Sbjct: 246 FLRCLMDQLHEELK 259
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
++ LP+ + +H++RF F K T V+FP++ L+L+ ++ K++ + YDL
Sbjct: 571 KMQNLPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFL----AKDSFSQTTNYDL 626
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 627 LSVICHHGTASSGHYIAYCRNDENNLW 653
>gi|24643793|ref|NP_728455.1| CG14619, isoform C [Drosophila melanogaster]
gi|386764876|ref|NP_001245799.1| CG14619, isoform F [Drosophila melanogaster]
gi|386764878|ref|NP_001245800.1| CG14619, isoform G [Drosophila melanogaster]
gi|22832693|gb|AAN09566.1| CG14619, isoform C [Drosophila melanogaster]
gi|28317311|gb|AAO39652.1| AT11044p [Drosophila melanogaster]
gi|262331596|gb|ACY46087.1| MIP13335p [Drosophila melanogaster]
gi|383293538|gb|AFH07511.1| CG14619, isoform F [Drosophila melanogaster]
gi|383293539|gb|AFH07512.1| CG14619, isoform G [Drosophila melanogaster]
Length = 938
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 127/349 (36%), Gaps = 70/349 (20%)
Query: 177 DGYEINDPSLEDIRH--VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-- 232
DGY+ S ++ GL NI T F+N IQ L L F R +
Sbjct: 596 DGYKTASSSRDEKSEGLCGLRNIGNTCFMNSVIQCLSHTQELTRFLRSHHGSRSLSTKDQ 655
Query: 233 -LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH 291
++H F L +++W A V+P E L+ + + Q + EF+ + L++LH
Sbjct: 656 QILHEFAKLIQEMWTANVH--TVTPME-LKRAFSTKHRMYSDYNQQDAQEFLRFFLDSLH 712
Query: 292 SDLRN--------------------------TKKNTSIIYECFQGELEVVKEIPKNTISG 325
S L + T+ S++ + F G+L K K T G
Sbjct: 713 SALNSGVKGETLNIDDNLSDNKKADLTWEWYTRHENSLVRDLFVGQL---KSTLKCTTCG 769
Query: 326 NDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKK 385
N T + PF L + LP K + + LF +
Sbjct: 770 N------------------TSVTFDPFWDLSVPLPSSSRCK------LEACLDLFIREEV 805
Query: 386 FDGETVTEVVRPHVARM---RYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLE 442
DG+ + + R + + R PKY+++H++RF++ + K +V FP + E
Sbjct: 806 LDGDEMPTCAKCKTRRKCTKSFTIQRFPKYLVIHLKRFSETRW--SKLSNIVEFPTSDSE 863
Query: 443 LKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
L + + N Y L A H G GG Y + W
Sbjct: 864 LN----MGSYGANSNSNVHYSLYAISNHMGSTAGGHYVALCKHPVSRKW 908
>gi|301756532|ref|XP_002914115.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Ailuropoda
melanoleuca]
gi|281347816|gb|EFB23400.1| hypothetical protein PANDA_001954 [Ailuropoda melanoleuca]
Length = 606
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 130/322 (40%), Gaps = 40/322 (12%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R + + L+ F L + IW
Sbjct: 268 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSNVHTALMEEFAKLIQTIW 327
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-------RNTK 298
+ + VSP EF + + + RF Q + EF+ +LL+ LH+++ ++
Sbjct: 328 TS-SPNDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKSNP 385
Query: 299 KNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLD 358
+N + + +G K + + D + D T PF L L
Sbjct: 386 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 445
Query: 359 LPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---------TVTEVVRPHVARMRYRVTRL 409
+ K P+V L + ++ F E T ++ + R
Sbjct: 446 I----------AKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRARKRCIKKFSIQRF 495
Query: 410 PKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIV 469
PK ++LH++RF+++ K T VNFP+++L+L+++ EN + Y+L A
Sbjct: 496 PKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFA-----SENTN-HAVYNLYAVSN 549
Query: 470 HDGKPEGGFYRVFVQRKSEELW 491
H G GG Y + + W
Sbjct: 550 HSGTTMGGHYTAYCRSPVTGEW 571
>gi|12854228|dbj|BAB29966.1| unnamed protein product [Mus musculus]
Length = 390
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 131/311 (42%), Gaps = 34/311 (10%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPENYRHCKSPLVHRFGDLTRKIWHAR 248
GL N+ T ++N +Q L V+PL +FL I + C S + F L +W
Sbjct: 46 GLRNLGNTCYMNAILQCLCSVSPLVEYFLSGKYITALKKDC-SEVTTAFAYLMTDMWLGD 104
Query: 249 NFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECF 308
+ VSP FL AV + F Q + EF+ ++LN LH L+ K + E
Sbjct: 105 S--DCVSPEIFLSAV-GSLYPAFLKKTQQDAQEFLIYVLNELHEALK--KHCRRRVNEKR 159
Query: 309 QGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDV 368
G+ +++P IS + E + T + + L LP P ++
Sbjct: 160 TGQ-SCCRKVPAQEISIITRLFEGQLSYSITCLKCESCTHKNEVFTI-LSLPIPSDYECS 217
Query: 369 MEKNIIPQVPLFNILKKFDGETVTEVVRPHV--------ARMRYRVTRLPKYMILHMRRF 420
++ + F F +T+T + + A +R ++++PK ++ H +RF
Sbjct: 218 LQDCL----QCF-----FQQDTLTWSNQIYCSFCEIKQEAAVRTTISKVPKIIVFHFKRF 268
Query: 421 TKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYR 480
K T +++P+ NL+L YI P +++ Y+L A + H G +GG Y
Sbjct: 269 DIQGTVKRKLRTDIHYPLTNLDLTPYI-CPVFRKHP----MYNLCAVVNHFGDLDGGHYT 323
Query: 481 VFVQRKSEELW 491
F + + W
Sbjct: 324 AFCKNSVTQAW 334
>gi|4689128|gb|AAD27773.1|AF077040_1 SIH003 [Homo sapiens]
Length = 317
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 112/275 (40%), Gaps = 40/275 (14%)
Query: 233 LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHS 292
LV F +W + SP V K FR Q + EFM +LL+ LH
Sbjct: 49 LVEEFRKTLCALWQGS--QTAFSPESLFYVVWKI-MPNFRGYQQQDAHEFMRYLLDHLHL 105
Query: 293 DLR---NTKKNTSIIYE----------CFQGELEVVKEIPKNTISGNDQNTEKGSDGGDD 339
+L+ N ++I+ E C G VV I G QN G
Sbjct: 106 ELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAI----FGGILQNEVNCLICG-- 159
Query: 340 HDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF-DGETV--TEVV 395
TE+ + PFL L LD+P K + P L + L+ F D E + TE+
Sbjct: 160 -----TESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELY 214
Query: 396 RPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPL 449
H + + + + +LPK + LH++RF + K T V FP++ L++K Y L
Sbjct: 215 MCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY--L 272
Query: 450 PTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
P+ + YDL A +VH G G G Y +
Sbjct: 273 LEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYA 307
>gi|410972085|ref|XP_003992491.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Felis catus]
Length = 606
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 130/322 (40%), Gaps = 40/322 (12%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL---IPENYRHCKS---PLVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L + H S L+ F L + IW
Sbjct: 268 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHGSSVHTALMEEFAKLIQTIW 327
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-------RNTK 298
+ + VSP EF + + + RF Q + EF+ +LL+ LH+++ ++
Sbjct: 328 TS-SPNDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKSNP 385
Query: 299 KNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLD 358
+N + + +G K + + D + D T PF L L
Sbjct: 386 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 445
Query: 359 LPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---------TVTEVVRPHVARMRYRVTRL 409
+ K P+V L + ++ F E T ++ + R
Sbjct: 446 I----------AKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRARKRCIKKFSIQRF 495
Query: 410 PKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIV 469
PK ++LH++RF+++ K T VNFP+++L+L+++ EN + Y+L A
Sbjct: 496 PKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFA-----SENTN-HAVYNLYAVSN 549
Query: 470 HDGKPEGGFYRVFVQRKSEELW 491
H G GG Y + + W
Sbjct: 550 HSGTTMGGHYTAYCRSPVTGEW 571
>gi|6573165|gb|AAF17575.1| testis ubiquitin specific processing protease [Rattus norvegicus]
gi|149041436|gb|EDL95277.1| ubiquitin specific peptidase 2, isoform CRA_c [Rattus norvegicus]
Length = 396
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 131/338 (38%), Gaps = 72/338 (21%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR---HCKSP---LVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R H S L+ F L + IW
Sbjct: 58 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQTIW 117
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIY 305
+ VSP EF + + + RF Q + EF+ +LL+ LH+
Sbjct: 118 TSSP-NDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHN------------- 162
Query: 306 ECFQGELEVVKEIPKNTISGNDQ--NTEKGSDGGDDHDNITTETSRMPFLMLG------- 356
E+ V PK + D + EKG + + E SR+ L +G
Sbjct: 163 -----EVNRVAARPKPSPESLDHLPDEEKGRQMWRKY--LEREDSRIGDLFVGQLKSSLT 215
Query: 357 --------------LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---------TVTE 393
DL P + K P+V L + ++ F E T
Sbjct: 216 CTDCGYCSTVFDPFWDLSLP------IAKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCR 269
Query: 394 VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPK 453
++ V R PK ++LH++RF+++ K T VNFP+++L+L+++
Sbjct: 270 CRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREF-----AS 324
Query: 454 ENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
EN + Y+L A H G GG Y + + W
Sbjct: 325 ENTN-HAVYNLYAVSNHSGTTMGGHYTAYCRSPVTGEW 361
>gi|321250129|ref|XP_003191699.1| ubiquitin-specific protease [Cryptococcus gattii WM276]
gi|317458166|gb|ADV19912.1| Ubiquitin-specific protease, putative [Cryptococcus gattii WM276]
Length = 1310
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 134/338 (39%), Gaps = 45/338 (13%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI--------PENYRHCKSPLVHRFGDLTRK 243
GL N+ T ++N TIQ L P FFL EN K L + +L R
Sbjct: 949 TGLKNLGNTCYMNSTIQCLSATYPFSTFFLDGTFSRSINKENPLGTKGELAKAWAELLRV 1008
Query: 244 IWHAR-NFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTS 302
+W + F +SP F + + + + F Q + EF+S++L+ LH DL K+
Sbjct: 1009 LWSEKYEF---LSPMTFRKQITHFAPQ-FLGSDQHDSQEFLSFVLDGLHEDLNRIKRKPP 1064
Query: 303 IIYECFQGELEVVKEIPKNTISGNDQNTEKGSDG--------GDDHDNITT----ETSRM 350
+ + E +++ P S + + + G + + +TS
Sbjct: 1065 PVEMTPERE-AMLESAPPEVASEREWAIYRQRNDSLIVDLFQGQYRNRLECLTCHKTSTT 1123
Query: 351 PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLP 410
+ + LP P V+ + +I + +++K + A + RLP
Sbjct: 1124 YDAFMYMSLPVPSGKTKVVIQELIDEFVKAEVMEKENAWYCPRCKTNRRASKTLTIARLP 1183
Query: 411 KYMILHMRRFT-KNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRS--------- 460
+++ ++RFT ++ F +K+ T V FP++ L+L Y+P P R
Sbjct: 1184 PVLLIQLKRFTTRDGLFWDKSETPVIFPIRGLDLTRYLPGPAGSSVGSGRQVGPDGTFDP 1243
Query: 461 -------KYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
KYDL H G G Y FV KS+E W
Sbjct: 1244 RAQVGPFKYDLYGVSNHMGTLSSGHYTAFV--KSKEGW 1279
>gi|390594435|gb|EIN03846.1| cysteine proteinase [Punctularia strigosozonata HHB-11173 SS5]
Length = 1186
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 142/347 (40%), Gaps = 55/347 (15%)
Query: 189 IRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHC---------KSPLVHRFGD 239
I GL N+ T ++N TIQ L P FFL ++H K + F
Sbjct: 822 ISPAGLKNMGNTCYMNSTIQCLNATVPFARFFLD-GYWQHAINMVNPLGTKGAVTAGFAT 880
Query: 240 LTRKIWHARNFKGQVS---PHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-R 295
L R I +G VS P +F ++ + + F Q + EF+S LL++LH D+ R
Sbjct: 881 LLRDI-----NQGAVSYLTPVKFRADFIRHANQ-FDGSEQHDCQEFLSTLLDSLHEDMNR 934
Query: 296 NTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDG--------GDDHDNI---- 343
+K T + ELE +P+ S + + + + G + +
Sbjct: 935 ILQKPTYQPTPERERELE---RLPQQIASEQEWHIYRMRNDSLIVDFFQGQFRNRLQCLT 991
Query: 344 --TTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVAR 401
T T+ F+ L L +P L K +++ + V I++K D A
Sbjct: 992 CQNTSTTYNTFMYLTLPVPTGRLSKVTLQQCLDAFV-KEEIMEKSDAWNCPHCKALRRAT 1050
Query: 402 MRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTP--------- 452
+ ++RLP +++H++RF+ +K T V+FP K L+L +Y+P P P
Sbjct: 1051 KQLSLSRLPPILLIHLKRFSSKGAAADKIETFVDFPTKGLDLTNYMPPPLPPGVDNGIPG 1110
Query: 453 --------KENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+ KYDL A H G G Y F+ +++ L+
Sbjct: 1111 AQQLSLDDPRRQIPPYKYDLYAVTNHFGSLSSGHYTAFISSRNQWLY 1157
>gi|6492124|gb|AAF14189.1|AF106658_1 deubiquitinating enzyme Ubp45 [Rattus norvegicus]
Length = 396
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 132/338 (39%), Gaps = 72/338 (21%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR---HCKSP---LVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R H S L+ F L + IW
Sbjct: 58 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQTIW 117
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIY 305
+ VSP EF + + + RF Q + EF+ +LL+ LH+
Sbjct: 118 TSSP-NDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHN------------- 162
Query: 306 ECFQGELEVVKEIPKNTISGNDQ--NTEKGSDGGDDHDNITTETSRMPFLMLG------- 356
E+ V PK + D + EKG + + E SR+ L +G
Sbjct: 163 -----EVNRVAARPKPSPESLDHLPDEEKGRQMWRKY--LEREDSRIGDLFVGQLKSSLT 215
Query: 357 --------------LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE--------- 393
DL P + K P+V L + ++ F E V +
Sbjct: 216 CTDCGYCSTVFDPFWDLSLP------IAKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCR 269
Query: 394 VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPK 453
++ V R PK ++LH++RF+++ K T VNFP+++L+L+++
Sbjct: 270 CRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREF-----AS 324
Query: 454 ENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
EN + Y+L A H G GG Y + + W
Sbjct: 325 ENTN-HAVYNLYAVSNHSGTTMGGHYTAYCRSPVTGEW 361
>gi|167518329|ref|XP_001743505.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778604|gb|EDQ92219.1| predicted protein [Monosiga brevicollis MX1]
Length = 328
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 126/311 (40%), Gaps = 43/311 (13%)
Query: 203 VNVTIQSLMRVTPLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQV 254
+N +Q L+ PL +F L N CK L + L ++ + R ++ +
Sbjct: 1 MNSVLQCLLYARPLTMYFTQGRYRKDLNRTNPMGCKGELAEEYSALVVEL-NKRCYR-YL 58
Query: 255 SPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYEC------- 307
+P +F +A + + +F Q + EF S+ L+ LH DL +K + +C
Sbjct: 59 AP-KFFKATLASFAPQFEGTQQQDAQEFASFFLDGLHEDLNRVRKK---VCDCNLDGMPD 114
Query: 308 -------FQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLP 360
+ L I + G ++ + G + N + PF+ L L +P
Sbjct: 115 HLAADKAWNEYLTRHNSIIVDLFQGQYRSAMRCLTCGHESLNFS------PFMFLTLPIP 168
Query: 361 PPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRF 420
P +I + F ++ +G + A + RLP +++H++RF
Sbjct: 169 ANP------SVDIRACLQEFVRAERVNGWRCPKCKCARDASKTLSIWRLPPLLMIHLKRF 222
Query: 421 TKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYR 480
T + F +K T V+FP+ NL+++D + P +E ++ Y L H G GG Y
Sbjct: 223 TFSGPFRDKLSTRVDFPLTNLKIQDGVANPKLQEQKR---DYKLFGVSNHYGNMSGGHYI 279
Query: 481 VFVQRKSEELW 491
F + W
Sbjct: 280 AFCRDFQSRRW 290
>gi|417400194|gb|JAA47059.1| Putative ubiquitin carboxyl-terminal hydrolase 2 [Desmodus
rotundus]
Length = 396
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 132/328 (40%), Gaps = 52/328 (15%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R + + L+ F L + IW
Sbjct: 58 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSNAHTALMEEFAKLIQTIW 117
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT----KKNT 301
+ + VSP EF + + + RF Q + EF+ +LL+ LH+ + K N
Sbjct: 118 TS-SLNDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHNAVNRVTVRPKSNP 175
Query: 302 SII---------YECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPF 352
+ + ++ LE + G +++ +D G T PF
Sbjct: 176 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCG------YCSTVFDPF 229
Query: 353 LMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE---------VVRPHVARMR 403
L LP + K P+V L + ++ F E V + +
Sbjct: 230 W--DLSLP--------IAKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRTRKRCIKK 279
Query: 404 YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYD 463
+ + R PK ++LH++RF+++ K T VNFP+++L+L+++ T + Y+
Sbjct: 280 FSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFASETTN------HAVYN 333
Query: 464 LIANIVHDGKPEGGFYRVFVQRKSEELW 491
L A H G GG Y + + W
Sbjct: 334 LYAVSNHSGTTVGGHYTAYCRSPVTGEW 361
>gi|405118112|gb|AFR92887.1| ubiquitin-specific protease [Cryptococcus neoformans var. grubii H99]
Length = 1246
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 134/338 (39%), Gaps = 45/338 (13%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI--------PENYRHCKSPLVHRFGDLTRK 243
GL N+ T ++N TIQ L P FFL EN K L + +L R
Sbjct: 885 TGLKNLGNTCYMNSTIQCLSATYPFSTFFLDGTFARSINKENPLGTKGELAKAWAELLRV 944
Query: 244 IWHAR-NFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTS 302
+W + F +SP F + + + + F Q + EF+S++L+ LH DL K+
Sbjct: 945 LWSEKYEF---LSPMTFRKQITHFAPQ-FLGSDQHDSQEFLSFVLDGLHEDLNRIKRKPP 1000
Query: 303 IIYECFQGELEVVKEIPKNTISGNDQNTEKGSDG--------GDDHDNITT----ETSRM 350
+ + E +++ P S + + + G + + +TS
Sbjct: 1001 PVEMTPEREA-MLESAPPEVASEREWAIYRQRNDSLIVDLFQGQYRNRLECLTCHKTSTT 1059
Query: 351 PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLP 410
+ + LP P V+ + +I + +++K + A + RLP
Sbjct: 1060 YDAFMYMSLPVPSGKTKVVIQELIDEFVKAEVMEKENAWYCPRCKTNRRASKTLTIARLP 1119
Query: 411 KYMILHMRRFT-KNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRS--------- 460
+++ ++RFT ++ F +K+ T V FP++ L+L Y+P P R
Sbjct: 1120 PVLLIQLKRFTTRDGLFWDKSETPVIFPIRGLDLTRYLPGPAGSSIGSGRQVGPDGTFDP 1179
Query: 461 -------KYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
KYDL H G G Y FV KS+E W
Sbjct: 1180 RAQVGPFKYDLYGVSNHMGTLSSGHYTAFV--KSKEGW 1215
>gi|195157880|ref|XP_002019822.1| GL12603 [Drosophila persimilis]
gi|194116413|gb|EDW38456.1| GL12603 [Drosophila persimilis]
Length = 901
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 135/331 (40%), Gaps = 64/331 (19%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKS-------PLVHRFGDLTRKI 244
GL N+ T ++N +Q L TP + + + Y++ S ++ L +++
Sbjct: 563 TGLKNLGNTCYMNSILQCLSN-TPQLTEYCLSDKYKNYISRSNKTNGQVIEEVAALIKEL 621
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRN-------- 296
W+ + +K S L++V+ + FR Q + EF++ L++ LHSDL+
Sbjct: 622 WNGQ-YKCVASRD--LRSVVGQYQNIFRGVDQQDSHEFLTILMDWLHSDLQTLDVSRMRE 678
Query: 297 ------------TKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNIT 344
TK SII F G++ K+T+ N E T
Sbjct: 679 TIGAAEQAWLDFTKAKESIILHLFYGQM-------KSTVKCVTCNKESA----------T 721
Query: 345 TETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRY 404
E F L L+LPP + E + + ++ ++ G A +
Sbjct: 722 YEC----FSNLSLELPP-----NANECQLNQCMDMYFSGERIQGWNCPNCKTKRAAIKKL 772
Query: 405 RVTRLPKYMILHMRRF---TKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSK 461
+++LP +++H++RF T N K ++FP++NLE+ YI E+ + K
Sbjct: 773 DISKLPPVLVVHLKRFYADTSNTGSYAKKQNFLSFPLQNLEMSPYI---ARAESRAAKPK 829
Query: 462 -YDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y L A H G EGG Y F + + W
Sbjct: 830 TYQLYAVSNHYGTMEGGHYTAFCKSPNYGRW 860
>gi|198455403|ref|XP_001359977.2| GA19137, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198133229|gb|EAL29129.2| GA19137, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 901
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 135/331 (40%), Gaps = 64/331 (19%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKS-------PLVHRFGDLTRKI 244
GL N+ T ++N +Q L TP + + + Y++ S ++ L +++
Sbjct: 563 TGLKNLGNTCYMNSILQCLSN-TPQLTEYCLSDKYKNYISRSNKTNGQVIEEVAALIKEL 621
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRN-------- 296
W+ + +K S L++V+ + FR Q + EF++ L++ LHSDL+
Sbjct: 622 WNGQ-YKCVASRD--LRSVVGQYQNIFRGVDQQDSHEFLTILMDWLHSDLQTLDVSRMRE 678
Query: 297 ------------TKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNIT 344
TK SII F G++ K+T+ N E T
Sbjct: 679 TIGAAEQAWLDFTKAKESIILHLFYGQM-------KSTVKCVTCNKESA----------T 721
Query: 345 TETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRY 404
E F L L+LPP + E + + ++ ++ G A +
Sbjct: 722 YEC----FSNLSLELPP-----NANECQLNQCMDMYFSGERIQGWNCPNCKTKRAAIKKL 772
Query: 405 RVTRLPKYMILHMRRF---TKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSK 461
+++LP +++H++RF T N K ++FP++NLE+ YI E+ + K
Sbjct: 773 DISKLPPVLVVHLKRFYADTSNTGSYAKKQNFLSFPLQNLEMSPYI---ARAESRAAKPK 829
Query: 462 -YDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y L A H G EGG Y F + + W
Sbjct: 830 TYQLYAVSNHYGTMEGGHYTAFCKSPNYGRW 860
>gi|194034732|ref|XP_001927691.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Sus scrofa]
Length = 373
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 132/325 (40%), Gaps = 42/325 (12%)
Query: 182 NDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPENYRHCKSPLVHRF 237
N P + + GL N+ T ++N +Q L ++PL +FL I + C S + F
Sbjct: 36 NQPHFQGV--TGLRNLGNTCYMNAILQCLCSISPLVEYFLSGKYITALQKDC-SEVATAF 92
Query: 238 GDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT 297
+ +W + VSP F A+ + Q + EF+ ++LN LH L+
Sbjct: 93 AYVMTDMWLGDS--ECVSPEIFRSALGNLYPALMK-KTQQDAQEFLIYVLNELHEALKKY 149
Query: 298 KKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPF---LM 354
+ S E + + I+ + +G + I + + +
Sbjct: 150 HRRRSY-------ENRSIPRCCRKMIASESSIITRLFEGQLSYSIICLKCENCTYKNEVF 202
Query: 355 LGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVA--------RMRYRV 406
L LP P ++ ++ + F F +T+T + H + +R +
Sbjct: 203 TVLPLPIPSEYECSLQDCL----QCF-----FQQDTLTWNNQIHCSFCETKQETAVRASI 253
Query: 407 TRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIA 466
++ PK ++ H++RF K T +++P+ NL+L YI P +++ KY+L A
Sbjct: 254 SKAPKIIVFHLKRFDILGTMKRKLRTDIHYPLTNLDLTPYI-CPIFRKHP----KYNLCA 308
Query: 467 NIVHDGKPEGGFYRVFVQRKSEELW 491
+ H G +GG Y F + + W
Sbjct: 309 VVNHFGDLDGGHYTAFCKNSVTQAW 333
>gi|348545019|ref|XP_003459978.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like
[Oreochromis niloticus]
Length = 394
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 135/332 (40%), Gaps = 61/332 (18%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDLTRKIW 245
VGL N+ T F+N +Q L LR++ L + R + L+ F L + +W
Sbjct: 58 VGLKNLGNTCFMNSILQCLSNTQSLRDYCLHNSHRRDLNNNSRTNTALMEEFAKLIQTMW 117
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIY 305
+ VSP EF + + + RF Q + EF+ +LL+ LH+
Sbjct: 118 -TSSSSEAVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHN------------- 162
Query: 306 ECFQGELEVVKEIPKNTISGNDQ--NTEKGSDGGDDHDNITTETSRMPFLMLG------- 356
E+ V P+ T+ D + EKG + + E S++ L +G
Sbjct: 163 -----EVNRVTVRPRGTVEDFDHLPDEEKGKKMWSKY--LEREDSKIVDLFVGQLKSSLT 215
Query: 357 --------------LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARM 402
DL P K E +++ + LF DG+ R R
Sbjct: 216 CSHCGFCSTVFDPFWDLSLPIAKKGYGEVSLMDCMRLFTKEDVLDGDEKPTCYRCKARRR 275
Query: 403 ---RYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLR 459
++ + + PK ++LH++RF++ K T VNFP+K+L+L+++ EN +
Sbjct: 276 CTKKFTIQKFPKILVLHLKRFSEAR-RTSKLSTFVNFPMKDLDLREF-----ASENS-IN 328
Query: 460 SKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+ Y+L A H G GG Y + + S W
Sbjct: 329 AVYNLYAVSNHSGTTMGGHYTAYCRNPSSGEW 360
>gi|405973690|gb|EKC38387.1| Ubiquitin carboxyl-terminal hydrolase 36 [Crassostrea gigas]
Length = 1002
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 122/307 (39%), Gaps = 48/307 (15%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNFK 251
GL N+ T F+N T+Q L PL N+ E+ + CK P +L R I N
Sbjct: 100 GLVNMGNTCFLNSTLQCLAYTAPLVNYCFSGEHNQTCKQPGFCMMCELQRHIKRCYENSG 159
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL-------HSDLRNTKKNTSII 304
+ P LQ +K K G Q + EF+ ++++++ H+ L K T+++
Sbjct: 160 SNIKPQAILQK-LKMIAKHMHWGRQEDAHEFLRYVVDSMQKSILNGHAKLDKFSKETTVV 218
Query: 305 YECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPL 364
+ F G L + + N + PFL + LD+ P
Sbjct: 219 NQIFGGYLRSQVQCLRCKEKSNTYD---------------------PFLDISLDIKTVPS 257
Query: 365 FKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHV---ARMRYRVTRLPKYMILHMRRFT 421
+ EK ++P+ K D + R A R+ V + P + + ++RF
Sbjct: 258 LEKAFEKYVLPE--------KLDCDNAYMCNRCKQKVPALKRFSVHKPPNVLTVSLKRFD 309
Query: 422 KNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG-KPEGGFYR 480
+ K V+FP K L L+ Y+ + + E + + L A +VH G G Y
Sbjct: 310 YSKMVQGKIGRHVHFPEK-LNLRPYM---SNRGGEPIL--FHLNAVLVHSGYTANSGHYY 363
Query: 481 VFVQRKS 487
+V+ S
Sbjct: 364 CYVKASS 370
>gi|73954632|ref|XP_859639.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 2 [Canis
lupus familiaris]
Length = 606
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 130/322 (40%), Gaps = 40/322 (12%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R + + L+ F L + IW
Sbjct: 268 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSNVHTALMEEFAKLIQTIW 327
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-------RNTK 298
+ + VSP EF + + + RF Q + EF+ +LL+ LH+++ ++
Sbjct: 328 TS-SPNDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKSNP 385
Query: 299 KNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLD 358
+N + + +G K + + D + D T PF L L
Sbjct: 386 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 445
Query: 359 LPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---------TVTEVVRPHVARMRYRVTRL 409
+ K P+V L + ++ F E T ++ + R
Sbjct: 446 I----------AKRGYPEVTLTDCMRLFTKEDVLDGDEKPTCCRCRARKRCIKKFSIQRF 495
Query: 410 PKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIV 469
PK ++LH++RF+++ K T VNFP+++L+L+++ EN + Y+L A
Sbjct: 496 PKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFA-----SENTN-HAVYNLYAVSN 549
Query: 470 HDGKPEGGFYRVFVQRKSEELW 491
H G GG Y + + W
Sbjct: 550 HSGTTMGGHYTAYCRSPVTGEW 571
>gi|353230425|emb|CCD76596.1| ubiquitin-specific peptidase 8 (C19 family) [Schistosoma mansoni]
Length = 654
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 136/337 (40%), Gaps = 44/337 (13%)
Query: 182 NDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFL--------IPENYRHCKSPL 233
N+ ++ R GL N+ T ++N +QSL L ++FL + N +
Sbjct: 291 NNQAIHQTRTNGLRNLGNTCYINSVVQSLSHTRALVHYFLDGFHERQAVVSNRLGYGGEI 350
Query: 234 VHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSD 293
V F L +++ N ++ ++F AV K K F Q + +EF+ +LL+ LH D
Sbjct: 351 VKHFEMLLSALYNQPNQDAEL--YKFRSAVAKHQSK-FSSNDQQDSLEFLLFLLDGLHED 407
Query: 294 L---RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM 350
L R+ K N S + + +E S N+Q E D +N +S
Sbjct: 408 LNEARSEKNNNSTKLKHNESMIEYT--------SSNEQ-AEAAWIQHKDFNNSIIVSSFQ 458
Query: 351 PFLMLGLDLPPPPLFKDVMEKNIIPQVP-------LFNILKKF-DGETVTEVVRPHVARM 402
L + + + ++ +P L + LK F + E + R H
Sbjct: 459 GLLRSTVKCNSCHVTSTTFDVFMVLSLPIEQNKCQLTDCLKLFLEKEEMVGQCRWHCPSC 518
Query: 403 RYR--------VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKE 454
R + +LP Y+I+H++RF K T V+FP++ L++ +I P
Sbjct: 519 NTRRDASKWIELWKLPTYLIIHLKRFRYEYGNWRKQTTNVDFPIECLDMSSFIVGPKLHS 578
Query: 455 NEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+E Y L + + H G E G Y F + + W
Sbjct: 579 SE-----YALYSVLNHRGTMESGHYTTFCRNIRDGRW 610
>gi|33438289|dbj|BAC65724.2| mKIAA1097 protein [Mus musculus]
Length = 837
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 98/262 (37%), Gaps = 67/262 (25%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQ 148
++ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 13 KMTTFRNHCPHLDSVGEITKEDLIQKSLGACQDCKVRGPNL--WACLENRCSYVGCGESQ 70
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH---------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 71 VDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTPPSLPHVRQPQQTQENSVQ 130
Query: 192 ------------------------------------VGLNNIKETDFVNVTIQSLMRVTP 215
GL NI T ++N +Q+L P
Sbjct: 131 DFKIPSNPALKTPMVAVSEDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPP 190
Query: 216 LRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
L FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 191 LTQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPANLFQGI-KTVNPTFRG 248
Query: 274 GVQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 249 YSQQDAQEFLRCLMDLLHEELK 270
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 499 KVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 554
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 555 LSVICHHGTASSGHYIAYCRNNLNNLW 581
>gi|194897797|ref|XP_001978724.1| GG19743 [Drosophila erecta]
gi|190650373|gb|EDV47651.1| GG19743 [Drosophila erecta]
Length = 1414
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 129/350 (36%), Gaps = 72/350 (20%)
Query: 177 DGYEINDPSLEDIRH--VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-- 232
DGY+ S ++ GL NI T F+N IQ L L F R +
Sbjct: 1072 DGYKSASSSRDEKSEGLCGLRNIGNTCFMNSVIQCLSHTQELTRFLRSHHGSRSSATKDQ 1131
Query: 233 -LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGV-QSNPVEFMSWLLNTL 290
++H F L +++W + V+P E +A ++K R Q + EF+ + L++L
Sbjct: 1132 QILHEFAKLIQEMWTSNVH--TVTPMELKRAF--STKHRMYSDYNQQDAQEFLRFFLDSL 1187
Query: 291 HSDLRN--------------------------TKKNTSIIYECFQGELEVVKEIPKNTIS 324
HS L + T+ S++ + F G+L K K T
Sbjct: 1188 HSALNSGVKGETLNIDDNLSDNKKADLTWEWYTRHENSLVRDLFVGQL---KSTLKCTTC 1244
Query: 325 GNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILK 384
GN T + PF L + LP K + + LF +
Sbjct: 1245 GN------------------TSVTFDPFWDLSVPLPSSSRCK------LEACLDLFIREE 1280
Query: 385 KFDGETVTEVVRPHVARM---RYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNL 441
DG+ + + R + + R PKY+++H++RF++ + K +V FP +
Sbjct: 1281 VLDGDEMPTCAKCKTRRKCTKSFTIQRFPKYLVIHLKRFSETRW--SKLSNIVEFPTSDS 1338
Query: 442 ELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
EL + + N Y L A H G GG Y + W
Sbjct: 1339 ELN----MGSYGANSNSNVHYSLYAISNHMGSTAGGHYVALCKHPVSRKW 1384
>gi|348574069|ref|XP_003472813.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 2
[Cavia porcellus]
Length = 396
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 130/322 (40%), Gaps = 40/322 (12%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL---IPENYRHCKSP---LVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L + H S L+ F L + IW
Sbjct: 58 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHTSSVHTGLMEEFAKLIQTIW 117
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-------RNTK 298
+ VSP EF + + + RF Q + EF+ +LL+ LH+++ +++
Sbjct: 118 TSCP-NDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHNEVNRVAVRPKSSH 175
Query: 299 KNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLD 358
+N + + +G K + + D + D T PF L L
Sbjct: 176 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 235
Query: 359 LPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---------TVTEVVRPHVARMRYRVTRL 409
+ K P+V L + ++ F E T ++ + R
Sbjct: 236 I----------AKRGYPEVTLMDCMRLFTKEDILDGDEKPTCCRCRARKRCIKKFSIQRF 285
Query: 410 PKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIV 469
PK ++LH++RF+++ K T VNFP+++L+L+++ EN + Y+L A
Sbjct: 286 PKILVLHLKRFSESRIRTSKLSTFVNFPLRDLDLREF-----ASENTN-HAVYNLYAVSN 339
Query: 470 HDGKPEGGFYRVFVQRKSEELW 491
H G GG Y + + W
Sbjct: 340 HSGTTMGGHYTAYCRSPVTGEW 361
>gi|444722556|gb|ELW63246.1| Ubiquitin carboxyl-terminal hydrolase 2 [Tupaia chinensis]
Length = 395
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 132/338 (39%), Gaps = 72/338 (21%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL---IPENYRHCKS---PLVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L + H S L+ F L + IW
Sbjct: 57 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLSHSSSTHTALMEEFAKLIQAIW 116
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIY 305
+ VSP EF + + + RF Q + EF+ +LL+ LH+
Sbjct: 117 TSSP-NDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHN------------- 161
Query: 306 ECFQGELEVVKEIPKNTISGNDQ--NTEKGSDGGDDHDNITTETSRMPFLMLG------- 356
E+ V PK + D + EKG + + E SR+ L +G
Sbjct: 162 -----EVNRVTARPKPSPENLDHLPDDEKGRQMWRRY--LEREDSRIGDLFVGQLKSSLT 214
Query: 357 --------------LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE--------- 393
DL P + K P+V L + ++ F E V +
Sbjct: 215 CTDCGFCSTVFDPFWDLSLP------IAKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCR 268
Query: 394 VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPK 453
++ + R PK ++LH++RF+++ K T VNFP+++L+L+++
Sbjct: 269 CRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREF-----AS 323
Query: 454 ENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
EN + Y+L A H G GG Y + + W
Sbjct: 324 ENTN-HAVYNLYAVSNHSGTTMGGHYTAYCRSPVTGEW 360
>gi|351698851|gb|EHB01770.1| Ubiquitin carboxyl-terminal hydrolase 33 [Heterocephalus glaber]
Length = 909
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 96/256 (37%), Gaps = 66/256 (25%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQKSHAY 153
R CP+LD+V + +K C V NL +ACL C G Q H+
Sbjct: 5 RNHCPHLDSVGEITKEDLIQKSHGTCQDCKVRGPNL--WACLENRCSYVGCGESQVDHST 62
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH--------------- 191
HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 63 VHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQQQIQENTVQDFKIPS 122
Query: 192 ------------------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFL 221
GL NI T ++N +Q+L PL FFL
Sbjct: 123 NTTLKTPLVAVFDDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPLTQFFL 182
Query: 222 IPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNP 279
R K P + + + L ++WH ++ G V P Q + K FR Q +
Sbjct: 183 DCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTNLFQGI-KTVNPMFRGYCQQDA 240
Query: 280 VEFMSWLLNTLHSDLR 295
EF+ L++ LH +L+
Sbjct: 241 QEFLRCLMDLLHEELK 256
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 571 KVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 626
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 627 LSVICHHGTASSGHYIAYCRNNLNNLW 653
>gi|13529590|gb|AAH05506.1| Usp33 protein, partial [Mus musculus]
Length = 956
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 98/262 (37%), Gaps = 67/262 (25%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQ 148
++ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 55 KMTTFRNHCPHLDSVGEITKEDLIQKSLGACQDCKVRGPNL--WACLENRCSYVGCGESQ 112
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH---------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 113 VDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTPPSLPHVRQPQQTQENSVQ 172
Query: 192 ------------------------------------VGLNNIKETDFVNVTIQSLMRVTP 215
GL NI T ++N +Q+L P
Sbjct: 173 DFKIPSNPALKTPMVAVSEDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPP 232
Query: 216 LRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
L FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 233 LTQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPANLFQGI-KTVNPTFRG 290
Query: 274 GVQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 291 YSQQDAQEFLRCLMDLLHEELK 312
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 618 KVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 673
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 674 LSVICHHGTASSGHYIAYCRNNLNNLW 700
>gi|345799830|ref|XP_003434615.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Canis lupus
familiaris]
Length = 395
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 130/322 (40%), Gaps = 40/322 (12%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDLTRKIW 245
GL N+ T F+N +Q L LR++ L R + + L+ F L + IW
Sbjct: 57 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSNVHTALMEEFAKLIQTIW 116
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-------RNTK 298
+ VSP EF + + + RF Q + EF+ +LL+ LH+++ ++
Sbjct: 117 TSSP-NDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKSNP 174
Query: 299 KNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLD 358
+N + + +G K + + D + D T PF L L
Sbjct: 175 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 234
Query: 359 LPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE---------VVRPHVARMRYRVTRL 409
+ K P+V L + ++ F E V + ++ + R
Sbjct: 235 I----------AKRGYPEVTLTDCMRLFTKEDVLDGDEKPTCCRCRARKRCIKKFSIQRF 284
Query: 410 PKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIV 469
PK ++LH++RF+++ K T VNFP+++L+L+++ EN + Y+L A
Sbjct: 285 PKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFA-----SENTN-HAVYNLYAVSN 338
Query: 470 HDGKPEGGFYRVFVQRKSEELW 491
H G GG Y + + W
Sbjct: 339 HSGTTMGGHYTAYCRSPVTGEW 360
>gi|387019607|gb|AFJ51921.1| Ubiquitin carboxyl-terminal hydrolase 21 [Crotalus adamanteus]
Length = 629
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 136/334 (40%), Gaps = 59/334 (17%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRH---C----KSPLVHRFGDLTRK 243
H+GL N+ T F+N +Q L PLR++ L E +R C + L D+
Sbjct: 280 HIGLRNLGNTCFMNAVLQCLSSTKPLRDYCLRRE-FRQEQPCTLRTQQELTEALADVIAT 338
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + +P F ++V + F Q + EF+ +L++ LH ++ R +K+
Sbjct: 339 LWHPDTSEA-ANPSRF-KSVFQKYVPSFTGYSQQDAQEFLKFLMDRLHVEINRKGRKSPC 396
Query: 303 IIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTE---------------- 346
I+ + + V E T+S ++Q + + D+ +
Sbjct: 397 ILSD---AKWPSVLE-DSETLSDDEQANQMWKRYLEREDSKIVDLFVGQLKSCLKCQACG 452
Query: 347 ---TSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKK---FDGETVTEVVRPHVA 400
T+ F L L +P K + + FN+ K D E +
Sbjct: 453 YRSTTFEVFCDLSLPIP-----KKGFAGGKVSLLDCFNLFTKEEELDSENAPVCDK---C 504
Query: 401 RMRYRVT------RLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKE 454
R R R T R P+ ++LH+ RF+ + ++K V+FP++ L LK++
Sbjct: 505 RQRTRSTKKLTIQRFPRILVLHLNRFSTTRYSIKKCSVYVDFPLQQLNLKEFA------- 557
Query: 455 NEKLRSK-YDLIANIVHDGKPEGGFYRVFVQRKS 487
+EK + Y+L A H G G Y F + +S
Sbjct: 558 SEKAGTPVYNLYALCNHSGSVHYGHYTAFCKDQS 591
>gi|58477257|gb|AAH89315.1| Usp33 protein, partial [Mus musculus]
Length = 954
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 98/262 (37%), Gaps = 67/262 (25%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQ 148
++ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 53 KMTTFRNHCPHLDSVGEITKEDLIQKSLGACQDCKVRGPNL--WACLENRCSYVGCGESQ 110
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH---------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 111 VDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTPPSLPHVRQPQQTQENSVQ 170
Query: 192 ------------------------------------VGLNNIKETDFVNVTIQSLMRVTP 215
GL NI T ++N +Q+L P
Sbjct: 171 DFKIPSNPALKTPMVAVSEDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPP 230
Query: 216 LRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
L FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 231 LTQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPANLFQGI-KTVNPTFRG 288
Query: 274 GVQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 289 YSQQDAQEFLRCLMDLLHEELK 310
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 616 KVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 671
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 672 LSVICHHGTASSGHYIAYCRNNLNNLW 698
>gi|344240807|gb|EGV96910.1| Ubiquitin carboxyl-terminal hydrolase 2 [Cricetulus griseus]
Length = 379
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 132/322 (40%), Gaps = 40/322 (12%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDLTRKIW 245
VGL K F+N +Q L LR++ L R + + L+ F L + IW
Sbjct: 41 VGLLLNKAKCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSNAHTALMEEFAKLIQTIW 100
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-------RNTK 298
+ VSP EF + + + RF Q + EF+ +LL+ LH+++ + +
Sbjct: 101 TSSP-NDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKPSP 158
Query: 299 KNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLD 358
+N + + +G K + + D + D T PF L L
Sbjct: 159 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 218
Query: 359 LPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEV-VRPHVARMRYR--------VTRL 409
+ K P+V L + ++ F E V + +P R R R V R
Sbjct: 219 IA----------KRGYPEVTLMDCMRLFTKEDVLDGDEKPTCYRCRARKRCIKKFSVQRF 268
Query: 410 PKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIV 469
PK ++LH++RF+++ K T VNFP+++L+L+++ EN + Y+L A
Sbjct: 269 PKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREF-----ASENTN-HAVYNLYAVSN 322
Query: 470 HDGKPEGGFYRVFVQRKSEELW 491
H G GG Y + + W
Sbjct: 323 HSGTTMGGHYTAYCRSPVTGEW 344
>gi|24643795|ref|NP_728456.1| CG14619, isoform B [Drosophila melanogaster]
gi|22832694|gb|AAN09567.1| CG14619, isoform B [Drosophila melanogaster]
Length = 337
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 125/321 (38%), Gaps = 46/321 (14%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP---LVHRFGDLTRKIWHAR 248
GL NI T F+N IQ L L F R + ++H F L +++W A
Sbjct: 12 CGLRNIGNTCFMNSVIQCLSHTQELTRFLRSHHGSRSLSTKDQQILHEFAKLIQEMWTAN 71
Query: 249 NFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT----------- 297
V+P E L+ + + Q + EF+ + L++LHS L +
Sbjct: 72 --VHTVTPME-LKRAFSTKHRMYSDYNQQDAQEFLRFFLDSLHSALNSGVKGETLNIDDN 128
Query: 298 ---KKNTSIIYECF-QGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFL 353
K + +E + + E +V+++ G ++T K + G+ T + PF
Sbjct: 129 LSDNKKADLTWEWYTRHENSLVRDL----FVGQLKSTLKCTTCGN------TSVTFDPFW 178
Query: 354 MLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARM---RYRVTRLP 410
L + LP K + + LF + DG+ + + R + + R P
Sbjct: 179 DLSVPLPSSSRCK------LEACLDLFIREEVLDGDEMPTCAKCKTRRKCTKSFTIQRFP 232
Query: 411 KYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVH 470
KY+++H++RF++ + K +V FP + EL + + N Y L A H
Sbjct: 233 KYLVIHLKRFSETRW--SKLSNIVEFPTSDSELN----MGSYGANSNSNVHYSLYAISNH 286
Query: 471 DGKPEGGFYRVFVQRKSEELW 491
G GG Y + W
Sbjct: 287 MGSTAGGHYVALCKHPVSRKW 307
>gi|71022651|ref|XP_761555.1| hypothetical protein UM05408.1 [Ustilago maydis 521]
gi|46101424|gb|EAK86657.1| hypothetical protein UM05408.1 [Ustilago maydis 521]
Length = 1198
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 152/372 (40%), Gaps = 58/372 (15%)
Query: 159 AGHHVYINLRTEKVYCLPDGYEINDPSLEDIR--HVGLNNIKETDFVNVTIQSLMRVTPL 216
AGH ++ +VY P+ ++++I+ GL N+ + ++N T+Q L PL
Sbjct: 818 AGH-----VQASRVYSTPNR------NIDEIKIGLTGLKNLGNSCYMNSTLQCLSATIPL 866
Query: 217 RNFFLIPENYRHC---------KSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKAS 267
F L+ +Y+ + L L +W + VSP F +A+ + +
Sbjct: 867 ARF-LLDGSYKTAINRTNPLGTQGQLATALAGLVHVMWGEK--YAFVSPVTFREAMARFA 923
Query: 268 KKRFRIGVQSNPVEFMSWLLNTLHSDLR--NTKKNTSIIYECFQGELEVVKEIPKNTISG 325
FR Q + EF++ LL+ LH DL T+ + + ELE +P+ S
Sbjct: 924 PS-FRGYDQHDSQEFLAILLDGLHEDLNYVTTRPAAIEMTPARENELET---LPQQIASI 979
Query: 326 NDQNTEKGSDG--------GDDHDNIT------TETSRMPFLMLGLDLPPPPLFKDVMEK 371
+ + + G + +T T T+ F L L +P V +
Sbjct: 980 KEWGIYRMRNDSLVVDWFQGQFRNKLTCLTCGKTSTTYEAFTYLSLPVPSGRGVGKVALQ 1039
Query: 372 NIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNP 431
+ +L K D + RP A R ++RLP+ +++H++RF+ F +K
Sbjct: 1040 QCLDAFVREEVLDKGDMWNCSRCKRPRKATKRLSISRLPRVLLIHLKRFSFKGPFTDKID 1099
Query: 432 TLVNFPVKN-LELKDYIPLPTPKE-------NEKLRSK----YDLIANIVHDGKPEGGFY 479
T V FPV L+L +Y+P P P E L + YDL A H G G Y
Sbjct: 1100 TTVTFPVNTALDLTNYMPPPLPPGAAAAAGVKESLSQQPPYLYDLYAATHHFGSLNTGHY 1159
Query: 480 RVFVQRKSEELW 491
V + + + W
Sbjct: 1160 TATV-KSANDWW 1170
>gi|42516567|ref|NP_055832.3| ubiquitin carboxyl-terminal hydrolase 33 isoform 1 [Homo sapiens]
gi|116242838|sp|Q8TEY7.2|UBP33_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 33; AltName:
Full=Deubiquitinating enzyme 33; AltName: Full=Ubiquitin
thioesterase 33; AltName:
Full=Ubiquitin-specific-processing protease 33; AltName:
Full=VHL-interacting deubiquitinating enzyme 1;
Short=hVDU1
gi|119626774|gb|EAX06369.1| ubiquitin specific peptidase 33, isoform CRA_c [Homo sapiens]
Length = 942
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 98/262 (37%), Gaps = 67/262 (25%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQ 148
++ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 31 KMSAFRNHCPHLDSVGEITKEDLIQKSLGTCQDCKVQGPNL--WACLENRCSYVGCGESQ 88
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH---------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 89 VDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQ 148
Query: 192 ------------------------------------VGLNNIKETDFVNVTIQSLMRVTP 215
GL NI T ++N +Q+L P
Sbjct: 149 DFKIPSNTTLKTPLVAVFDDLDIEADEEDELRARGLTGLKNIGNTCYMNAALQALSNCPP 208
Query: 216 LRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
L FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 209 LTQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTTLFQGI-KTVNPTFRG 266
Query: 274 GVQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 267 YSQQDAQEFLRCLMDLLHEELK 288
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 604 KVQNFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 659
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 660 LSVICHHGTASSGHYIAYCRNNLNNLW 686
>gi|119626776|gb|EAX06371.1| ubiquitin specific peptidase 33, isoform CRA_e [Homo sapiens]
Length = 942
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 98/262 (37%), Gaps = 67/262 (25%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQ 148
++ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 31 KMSAFRNHCPHLDSVGEITKEDLIQKSLGTCQDCKVQGPNL--WACLENRCSYVGCGESQ 88
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH---------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 89 VDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQ 148
Query: 192 ------------------------------------VGLNNIKETDFVNVTIQSLMRVTP 215
GL NI T ++N +Q+L P
Sbjct: 149 DFKIPSNTTLKTPLVAVFDDLDIEADEEDELRARGLTGLKNIGNTCYMNAALQALSNCPP 208
Query: 216 LRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
L FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 209 LTQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTTLFQGI-KTVNPTFRG 266
Query: 274 GVQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 267 YSQQDAQEFLRCLMDLLHEELK 288
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 604 KVQNFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 659
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 660 LSVICHHGTASSGHYIAYCRNNLNNLW 686
>gi|297278990|ref|XP_002808266.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 33-like [Macaca mulatta]
Length = 1001
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 98/262 (37%), Gaps = 67/262 (25%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQ 148
++ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 137 KMSAFRNHCPHLDSVGEITKEDLIQKSHGTCQDCKVRGPNL--WACLENRCSYVGCGESQ 194
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH---------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 195 VDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQ 254
Query: 192 ------------------------------------VGLNNIKETDFVNVTIQSLMRVTP 215
GL NI T ++N +Q+L P
Sbjct: 255 DFKIPSNTTLKTPLVAVFDDLDIEVDEEDELRARGLTGLKNIGNTCYMNAALQALSNCPP 314
Query: 216 LRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
L FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 315 LTQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTNLFQGI-KTVNPTFRG 372
Query: 274 GVQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 373 YSQQDAQEFLRCLMDLLHEELK 394
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 663 KVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 718
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 719 LSVICHHGTASSGHYIAYCRNNLNNLW 745
>gi|392576694|gb|EIW69824.1| hypothetical protein TREMEDRAFT_30214 [Tremella mesenterica DSM 1558]
Length = 1221
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 132/337 (39%), Gaps = 50/337 (14%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP--------ENYRHCKSPLVHRFGDLTRK 243
GL N+ T ++N TIQ L P FL N K L FGDL
Sbjct: 876 TGLKNLGATCYMNSTIQCLSATYPFARLFLDGGYKKMVNVSNPLGTKGVLAKAFGDLLHA 935
Query: 244 IWHAR-NFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTS 302
+W + +F ++P F ++ + + Q + EF+S++L+ LH DL
Sbjct: 936 LWEEQYHF---LTPKTFRASITAFAPQFTATNEQHDSQEFLSFVLDGLHEDLNRVLVKPP 992
Query: 303 II---------YECFQGELEVVKE----------IPKNTISGNDQNTEKGSDGGDDHDNI 343
+ E E+ KE + G +N + G
Sbjct: 993 PVEMTPEREHALETLSPEVASEKEWQIYRMRDDSFIVDLFQGQYRNRLECLTCGK----- 1047
Query: 344 TTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMR 403
T T+ F+ + L +P ++ + +I + I+ K D P A
Sbjct: 1048 -TSTTYDAFMYMSLQIPR--GKNKLVVQELIDEFVETEIIDKDDAWYCPRCKVPRRASKT 1104
Query: 404 YRVTRLPKYMILHMRRF-TKNNFFVEKNPTLVNFPVKNLELKDYIP--LPTPKEN----- 455
+ RLP +++ ++RF TK+ F +K+ + FP+KNL+L Y+P + T +E+
Sbjct: 1105 LTIARLPPVLLIQLKRFSTKDGLFWDKSDAHIVFPLKNLDLSRYVPPRMSTGREDLGDPR 1164
Query: 456 -EKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+ KYD A H G G Y +V KS + W
Sbjct: 1165 TQVAPFKYDCYAVSNHIGTLSSGHYTAYV--KSSKGW 1199
>gi|353240766|emb|CCA72619.1| related to Ubiquitin carboxyl-terminal hydrolase 4 [Piriformospora
indica DSM 11827]
Length = 1027
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 131/360 (36%), Gaps = 60/360 (16%)
Query: 185 SLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHC---------KSPLVH 235
S +I GL N+ T ++N +Q L P FF I +R+ K L
Sbjct: 639 SASEIGMSGLKNLGNTCYMNSVLQCLSATAPFARFF-IDGRWRNAVNMLNPLGTKGKLTE 697
Query: 236 RFGDLTRKIWHARNFKGQVSPHEF----------------LQAVMKASKKRFRIGVQSNP 279
+ L +W A G ++P F L+ + A +F Q +
Sbjct: 698 GYARLLVDMWQAD--MGALTPIPFRVRGSRLRPVEDAEICLKKTVCAYAPQFADSNQHDA 755
Query: 280 VEFMSWLLNTLHSDLR--------NTKKNTSIIYECFQGELEVVKEIPKNTISGN----D 327
EFM +LL+ LH DL T+ E ++ +E ++ N D
Sbjct: 756 QEFMIFLLDGLHEDLNRILQRHIIETRPEREAELEALSTQIASEQEWQLYRMTNNSIIVD 815
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD 387
+ + + T T+ F+ L L +P V + + +++K D
Sbjct: 816 YFQGQFRNRMECMTCHKTSTTYNTFMHLSLPVPDHKQASRVSLQQCLDAFVQQEVMEKTD 875
Query: 388 GETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYI 447
A + RLP +++H++RF+ F EK TLV+FP+ NL+L Y+
Sbjct: 876 AWNCPNCKALRKATKVLTLCRLPPVLLIHLKRFSFKGPFTEKIETLVDFPINNLDLTGYM 935
Query: 448 PLPTPKENEK----------LRS----------KYDLIANIVHDGKPEGGFYRVFVQRKS 487
P P P E+ L S KYDL H G G Y FV +
Sbjct: 936 PPPLPAGAERTIVKYGRPQVLGSDDPRRQQPPYKYDLFGVTNHYGTLSSGHYTAFVSSAA 995
>gi|410301274|gb|JAA29237.1| ubiquitin specific peptidase 33 [Pan troglodytes]
Length = 942
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 98/262 (37%), Gaps = 67/262 (25%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQ 148
++ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 31 KMSAFRNHCPHLDSVGEITKEDLIQKSHGTCQDCKVQGPNL--WACLENRCSYVGCGESQ 88
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH---------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 89 VDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQ 148
Query: 192 ------------------------------------VGLNNIKETDFVNVTIQSLMRVTP 215
GL NI T ++N +Q+L P
Sbjct: 149 DFKIPSNTTLKTPLVAVFDDLDIEADEEDELRARGLTGLKNIGNTCYMNAALQALSNCPP 208
Query: 216 LRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
L FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 209 LTQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTTLFQGI-KTVNPTFRG 266
Query: 274 GVQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 267 YSQQDAQEFLRCLMDLLHEELK 288
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 604 KVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 659
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 660 LSVICHHGTASSGHYIAYCRNNLNNLW 686
>gi|332809268|ref|XP_003308213.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 1 [Pan
troglodytes]
gi|397472608|ref|XP_003807832.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 2 [Pan
paniscus]
Length = 942
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 98/262 (37%), Gaps = 67/262 (25%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQ 148
++ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 31 KMSAFRNHCPHLDSVGEITKEDLIQKSHGTCQDCKVQGPNL--WACLENRCSYVGCGESQ 88
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH---------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 89 VDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQ 148
Query: 192 ------------------------------------VGLNNIKETDFVNVTIQSLMRVTP 215
GL NI T ++N +Q+L P
Sbjct: 149 DFKIPSNTTLKTPLVAVFDDLDIEADEEDELRARGLTGLKNIGNTCYMNAALQALSNCPP 208
Query: 216 LRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
L FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 209 LTQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTTLFQGI-KTVNPTFRG 266
Query: 274 GVQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 267 YSQQDAQEFLRCLMDLLHEELK 288
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 604 KVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 659
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 660 LSVICHHGTASSGHYIAYCRNNLNNLW 686
>gi|395746718|ref|XP_002825502.2| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Pongo abelii]
Length = 360
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 127/323 (39%), Gaps = 36/323 (11%)
Query: 182 NDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPENYRHCKSPLVHRF 237
N P + + GL N+ T +VN +Q L + PL +FL I C S + F
Sbjct: 36 NQPHFQGV--TGLQNLCNTCYVNAILQCLCSILPLVEYFLSGKYITALQNDC-SEVATAF 92
Query: 238 GDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT 297
L +W + VSP E Q+ + F Q + EF+ ++LN LH L+
Sbjct: 93 AYLMTDMWLGDS--DCVSP-EIFQSALGNLYPAFMKKTQQDAQEFLIYVLNELHEALKKY 149
Query: 298 KKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPF---LM 354
YE +G + + NT + +G ++ + + + +
Sbjct: 150 HYPRRRSYE--KGSTQRCCRMWINT---ETSVITQLFEGQLNYSIVCLNCEKCTYKNEVF 204
Query: 355 LGLDLPPPPLF----KDVMEKNIIPQVPLFN--ILKKFDGETVTEVVRPHVARMRYRVTR 408
L LP P + +D ++ +N I F ET E ++ +++
Sbjct: 205 TVLSLPIPSEYECSLQDCLQSFFQQDALTWNNEIHCSF-CETKQETA------VKANISK 257
Query: 409 LPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANI 468
PK +I H++R+ K T +++P+ NL+L YI K KY L A +
Sbjct: 258 APKIIIFHLKRYDIQGTTKRKLRTDIHYPLTNLDLAPYICSICRK-----YPKYSLCAVV 312
Query: 469 VHDGKPEGGFYRVFVQRKSEELW 491
H G +GG Y F + + W
Sbjct: 313 NHFGDLDGGHYTAFCKNSVTQAW 335
>gi|256088992|ref|XP_002580603.1| ubiquitin-specific peptidase 2 (C19 family) [Schistosoma mansoni]
Length = 756
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 128/309 (41%), Gaps = 38/309 (12%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNF-----FLIPENYRHCKSPLV-HRFGDLTRKIW 245
VGLNN+ T F+N +Q L PL + FL N + L+ H + DL ++IW
Sbjct: 162 VGLNNLGNTCFMNSILQCLSNTAPLTEYCLEDRFLKDINKSSSMNGLLFHSYADLMKEIW 221
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIY 305
SP F + + + RF Q + EF+ ++L LH ++ +K + I
Sbjct: 222 DPDMANSSTSPSRFKSQIQRFA-PRFMGYSQQDSQEFLRYVLEGLHMEVNRVQKRPNPIK 280
Query: 306 ECFQGE-------LEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLD 358
++ E L + + + D + + + T+ PF L L
Sbjct: 281 PDYEAEDYNEKANLYWRRYLSMDNSEIVDLFVGQLMSTLECGECSFKSTTFDPFWDLSLP 340
Query: 359 LPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYR--------VTRLP 410
+P +I+ + LF ++ DG RP +R + R + + P
Sbjct: 341 IP------KKSNVSILDCLNLFTSKEELDGNE-----RPICSRCKTRRRCAKSFSIQKFP 389
Query: 411 KYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVH 470
+ ++LH++RF+ F K +V++P++NL+L I T +K ++Y L A H
Sbjct: 390 QILVLHLKRFSGER-FRSKMSVMVDYPLRNLDL---IGFATSSCTQK-SAQYKLYAVSNH 444
Query: 471 DGKPEGGFY 479
G G Y
Sbjct: 445 SGSVYTGHY 453
>gi|351705889|gb|EHB08808.1| Ubiquitin carboxyl-terminal hydrolase 2 [Heterocephalus glaber]
Length = 612
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 130/322 (40%), Gaps = 40/322 (12%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL---IPENYRHCKS---PLVHRFGDLTRKIW 245
GL N+ T F+N +Q L L+++ L ++ H S L+ F L + IW
Sbjct: 274 AGLRNLGNTCFMNSILQCLSNTRELKDYCLQRLYMQDLSHTSSTHTALMEEFAKLIQTIW 333
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-------RNTK 298
+ VSP EF + + + RF Q + EF+ +LL+ LH+++ ++
Sbjct: 334 TSCP-NDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKSNP 391
Query: 299 KNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLD 358
+N + + + +G K + + D + D T PF L L
Sbjct: 392 ENLNHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 451
Query: 359 LPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---------TVTEVVRPHVARMRYRVTRL 409
+ K P+V L + ++ F E T ++ + R
Sbjct: 452 I----------AKRSYPEVTLMDCMRLFTKEDVLDGDEKPTCCCCRARKRCIKKFSIQRF 501
Query: 410 PKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIV 469
P ++LH++RF+++ K T VNFP+++L+L+++ EN + Y+L A
Sbjct: 502 PTILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFA-----SENTN-HAVYNLYAVSN 555
Query: 470 HDGKPEGGFYRVFVQRKSEELW 491
H G GG Y + + W
Sbjct: 556 HSGTTMGGHYTAYCRSPVTGEW 577
>gi|332809270|ref|XP_003308214.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 2 [Pan
troglodytes]
Length = 828
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 98/262 (37%), Gaps = 67/262 (25%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQ 148
++ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 31 KMSAFRNHCPHLDSVGEITKEDLIQKSHGTCQDCKVQGPNL--WACLENRCSYVGCGESQ 88
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH---------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 89 VDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQ 148
Query: 192 ------------------------------------VGLNNIKETDFVNVTIQSLMRVTP 215
GL NI T ++N +Q+L P
Sbjct: 149 DFKIPSNTTLKTPLVAVFDDLDIEADEEDELRARGLTGLKNIGNTCYMNAALQALSNCPP 208
Query: 216 LRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
L FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 209 LTQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTTLFQGI-KTVNPTFRG 266
Query: 274 GVQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 267 YSQQDAQEFLRCLMDLLHEELK 288
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 596 KVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 651
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 652 LSVICHHGTASSGHYIAYCRNNLNNLW 678
>gi|340502542|gb|EGR29222.1| ubiquitin carboxyl-terminal hydrolase family protein, putative
[Ichthyophthirius multifiliis]
Length = 669
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 133/323 (41%), Gaps = 32/323 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL-IPENYRHCKSPLV---------HRFGDLT 241
GL NI T F+N +Q + R F I + Y + + V + F L
Sbjct: 15 CGLINIGNTSFINSILQIFSNIPIFRKVFKKIYKVYSNLNTDAVPSSLNKKVTYYFSKLV 74
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR------ 295
+IW ++ + P E +Q V +KRF+ +P +F +N LH D +
Sbjct: 75 DQIWQGQH--RALKPLELVQ-VFYQIEKRFKGYGFKDPYDFFKQFVNILHDDFKYISSKA 131
Query: 296 -NTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM---- 350
+ K+NT + + F E +++ I T ++ KG T+ +++
Sbjct: 132 YDMKRNTPVC-KSFLEEWDIINNIKNYTDYSIISSSFKGKLCARVK---CTQCNQIYWCE 187
Query: 351 -PFLMLGLDLPPPP-LFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTR 408
F+ + LD+P L+K V I + LF K+ + + Y
Sbjct: 188 EDFMGISLDIPQKGFLYKKVQNPQIHKYLFLFLKNKQTISFYCEQCKDQVIIEKTYTFLT 247
Query: 409 LPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANI 468
LP + +H++RF + F +KN T++ FP+ LE +I + ++ ++++L+ I
Sbjct: 248 LPNILCIHLQRFKEKAF--QKNKTVIEFPINQLEFSHFIKVYIFNSYDQKLTQFELLGLI 305
Query: 469 VHDGKPEGGFYRVFVQRKSEELW 491
H+ G Y V+ L+
Sbjct: 306 EHEQSQGGDHYSTIVRNNKNGLF 328
>gi|42516561|ref|NP_963920.1| ubiquitin carboxyl-terminal hydrolase 33 isoform 3 [Homo sapiens]
gi|16741735|gb|AAH16663.1| Ubiquitin specific peptidase 33 [Homo sapiens]
gi|119626773|gb|EAX06368.1| ubiquitin specific peptidase 33, isoform CRA_b [Homo sapiens]
gi|123981168|gb|ABM82413.1| ubiquitin specific peptidase 33 [synthetic construct]
gi|123995993|gb|ABM85598.1| ubiquitin specific peptidase 33 [synthetic construct]
Length = 828
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 98/262 (37%), Gaps = 67/262 (25%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQ 148
++ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 31 KMSAFRNHCPHLDSVGEITKEDLIQKSLGTCQDCKVQGPNL--WACLENRCSYVGCGESQ 88
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH---------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 89 VDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQ 148
Query: 192 ------------------------------------VGLNNIKETDFVNVTIQSLMRVTP 215
GL NI T ++N +Q+L P
Sbjct: 149 DFKIPSNTTLKTPLVAVFDDLDIEADEEDELRARGLTGLKNIGNTCYMNAALQALSNCPP 208
Query: 216 LRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
L FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 209 LTQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTTLFQGI-KTVNPTFRG 266
Query: 274 GVQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 267 YSQQDAQEFLRCLMDLLHEELK 288
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 596 KVQNFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 651
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 652 LSVICHHGTASSGHYIAYCRNNLNNLW 678
>gi|10434504|dbj|BAB14279.1| unnamed protein product [Homo sapiens]
Length = 828
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 98/262 (37%), Gaps = 67/262 (25%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQ 148
++ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 31 KMSAFRNHCPHLDSVGEITKEDLIQKSLGTCQDCKVQGPNL--WACLENRCSYVGCGESQ 88
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH---------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 89 VDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQ 148
Query: 192 ------------------------------------VGLNNIKETDFVNVTIQSLMRVTP 215
GL NI T ++N +Q+L P
Sbjct: 149 DFKIPSNTTLKTPLVAVFDDLDIEADEEDELRARGLTGLKNIGNTCYMNAALQALSNCPP 208
Query: 216 LRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
L FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 209 LTQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTTLFQGI-KTVNPTFRG 266
Query: 274 GVQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 267 YSQQDAQEFLRCLMDLLHEELK 288
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V P+ + +H+RRF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 596 KVQNFPEILCIHLRRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 651
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 652 LSVICHHGTASSGHYIAYCRNNLNNLW 678
>gi|56693219|ref|NP_001008574.1| ubiquitin carboxyl-terminal hydrolase 2 [Danio rerio]
gi|56269271|gb|AAH86963.1| Zgc:92134 [Danio rerio]
Length = 391
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 130/314 (41%), Gaps = 41/314 (13%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDLTRKIW 245
VGL N+ T F+N +Q L LR++ L + R + L+ F L + +W
Sbjct: 58 VGLRNLGNTCFMNSILQCLSNTQSLRDYCLHNSHRRDLNNNNRTHTALMEEFAKLIQTMW 117
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT----KKNT 301
+ VSP EF + + + RF Q + EF+ +LL+ LH+++ + NT
Sbjct: 118 -TSSSSEAVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPRGNT 175
Query: 302 SII---------YECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPF 352
+ + LE + G +++ S+ G T PF
Sbjct: 176 EDFDHLPDEEKGKKMWSKYLEREDSKIVDLFVGQLKSSLTCSECG------YCSTVFDPF 229
Query: 353 LMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARM---RYRVTRL 409
L L P+ K E +++ + LF DG+ R R ++ V +
Sbjct: 230 WDLSL-----PIAKGYGEVSLMDCMRLFTKEDVLDGDEKPTCYRCKARRRCTKKFTVQKF 284
Query: 410 PKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIV 469
PK ++LH++RF++ K T VNFP+K+L+L+++ + + Y+L A
Sbjct: 285 PKILVLHLKRFSEARIRTSKLSTFVNFPMKDLDLREF------ASDRSSSAVYNLYAVSN 338
Query: 470 HDGKPEGGFYRVFV 483
H G GG Y +
Sbjct: 339 HSGTTMGGHYTAYC 352
>gi|402874529|ref|XP_003901088.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Papio
anubis]
Length = 351
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 112/275 (40%), Gaps = 40/275 (14%)
Query: 233 LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHS 292
LV F +W + SP V K FR Q + EFM +LL+ LH
Sbjct: 49 LVEEFRKTLCALWQGS--QTAFSPESLFYVVWKI-MPNFRGYQQQDAHEFMRYLLDHLHL 105
Query: 293 DLR---NTKKNTSIIYE----------CFQGELEVVKEIPKNTISGNDQNTEKGSDGGDD 339
+L+ N ++I+ E C G VV I G QN G
Sbjct: 106 ELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAI----FGGILQNEVNCLICG-- 159
Query: 340 HDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF-DGETV--TEVV 395
TE+ + PFL L LD+P K + P + + L+ F D E + TE+
Sbjct: 160 -----TESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCWVRDCLRSFTDLEELDETELY 214
Query: 396 RPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPL 449
H + + + + +LPK + LH++RF + K T V FP++ L++K Y L
Sbjct: 215 MCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY--L 272
Query: 450 PTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
P+ + YDL A +VH G G G Y +
Sbjct: 273 LEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYA 307
>gi|119626775|gb|EAX06370.1| ubiquitin specific peptidase 33, isoform CRA_d [Homo sapiens]
Length = 911
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 96/257 (37%), Gaps = 67/257 (26%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQKSHAY 153
R CP+LD+V + +K C V NL +ACL C G Q H+
Sbjct: 5 RNHCPHLDSVGEITKEDLIQKSLGTCQDCKVQGPNL--WACLENRCSYVGCGESQVDHST 62
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH--------------- 191
HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 63 IHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQDFKIP 122
Query: 192 -------------------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFF 220
GL NI T ++N +Q+L PL FF
Sbjct: 123 SNTTLKTPLVAVFDDLDIEADEEDELRARGLTGLKNIGNTCYMNAALQALSNCPPLTQFF 182
Query: 221 LIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSN 278
L R K P + + + L ++WH ++ G V P Q + K FR Q +
Sbjct: 183 LDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTTLFQGI-KTVNPTFRGYSQQD 240
Query: 279 PVEFMSWLLNTLHSDLR 295
EF+ L++ LH +L+
Sbjct: 241 AQEFLRCLMDLLHEELK 257
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 573 KVQNFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 628
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 629 LSVICHHGTASSGHYIAYCRNNLNNLW 655
>gi|198470304|ref|XP_001355290.2| GA13118 [Drosophila pseudoobscura pseudoobscura]
gi|198145386|gb|EAL32347.2| GA13118 [Drosophila pseudoobscura pseudoobscura]
Length = 872
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 121/332 (36%), Gaps = 68/332 (20%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP---LVHRFGDLTRKIWHAR 248
GL NI T F+N IQ L T L F R + ++ F L +++W +
Sbjct: 547 CGLRNIGNTCFMNSVIQCLSHTTELTRFLRTHHGSRSSATKDQLILFEFAKLIQEMWTSS 606
Query: 249 NFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRN------------ 296
V+P + L+ A + + Q + EF+ + L++LHS L +
Sbjct: 607 VH--TVTPMD-LKRAFSAKHRMYSDYNQQDAQEFLRFFLDSLHSALNSGIKGETLNIDDN 663
Query: 297 --------------TKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDN 342
T+ S++ + F G+L K K T GN
Sbjct: 664 LSDNKKADLTWEWYTRHENSLVRDLFVGQL---KSTLKCTTCGN---------------- 704
Query: 343 ITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARM 402
T + PF L + LP K + + LF + DG+ + + R
Sbjct: 705 --TSVTFDPFWDLSVPLPSSSRCK------LEACLDLFIREEILDGDEMPTCSKCKTRRK 756
Query: 403 ---RYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLR 459
+ + R PKY+++H++RF++ + K +V FP + +L + + N
Sbjct: 757 CTKSFTIQRFPKYLVIHLKRFSETRW--SKLSNIVEFPTADRDLN----MASYGANSNSN 810
Query: 460 SKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y L A H G GG Y + W
Sbjct: 811 VHYSLYAISNHMGSTAGGHYTALCKHPVSRKW 842
>gi|358054547|dbj|GAA99473.1| hypothetical protein E5Q_06172 [Mixia osmundae IAM 14324]
Length = 1213
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 138/354 (38%), Gaps = 90/354 (25%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFF--------LIPENYRHCKSPLVHRFGDLTRK 243
GL N+ T ++N TIQ L PL FF + +N + L G+L +
Sbjct: 789 TGLKNMGNTCYMNSTIQCLSATIPLARFFKDGSYRRAINRQNPMGTQGVLADAVGELIKV 848
Query: 244 IW-HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR------- 295
+W NF V+P F A+ + + + FR Q + EF+++LL+ LH DL
Sbjct: 849 LWTETYNF---VAPVSFRDAICRFAPQ-FRGTDQHDSQEFLAFLLDGLHEDLNFVVKKPR 904
Query: 296 ---------------------------NTKKNTSIIYECFQGELEVVKEIPKNTISGNDQ 328
T++N S+I FQG+ +N + Q
Sbjct: 905 PVEMTPEREAALESLPTQVASEKEWQIYTRRNNSVIVNWFQGQY-------RNRL----Q 953
Query: 329 NTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLF---NILKK 385
G T T+ F+ L L LP K E ++ + F +L+K
Sbjct: 954 CLTCGK----------TSTTYDTFMYLSLPLP----NKSRSEVSLQQCLDAFVKEEVLEK 999
Query: 386 FDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKD 445
+ A R ++RLP +++H +RF+ F E+ T+V +P+ +L+L +
Sbjct: 1000 SEAWNCPRCKTRRKATKRLTLSRLPPILLIHFKRFSFKGPFSERLDTVVRYPLSSLDLTN 1059
Query: 446 YIPLPTPKENEKLRS---------------KYDLIANIVHDGKPEGGFYRVFVQ 484
Y+P P P L + +YDL A H G G Y FV+
Sbjct: 1060 YLPPPLPPATANLYNVKPETVGPTASSSSYRYDLYAVSNHFGSLSSGHYTAFVK 1113
>gi|332809266|ref|XP_513509.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 3 [Pan
troglodytes]
gi|397472606|ref|XP_003807831.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 1 [Pan
paniscus]
Length = 911
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 96/257 (37%), Gaps = 67/257 (26%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQKSHAY 153
R CP+LD+V + +K C V NL +ACL C G Q H+
Sbjct: 5 RNHCPHLDSVGEITKEDLIQKSHGTCQDCKVQGPNL--WACLENRCSYVGCGESQVDHST 62
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH--------------- 191
HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 63 IHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQDFKIP 122
Query: 192 -------------------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFF 220
GL NI T ++N +Q+L PL FF
Sbjct: 123 SNTTLKTPLVAVFDDLDIEADEEDELRARGLTGLKNIGNTCYMNAALQALSNCPPLTQFF 182
Query: 221 LIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSN 278
L R K P + + + L ++WH ++ G V P Q + K FR Q +
Sbjct: 183 LDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTTLFQGI-KTVNPTFRGYSQQD 240
Query: 279 PVEFMSWLLNTLHSDLR 295
EF+ L++ LH +L+
Sbjct: 241 AQEFLRCLMDLLHEELK 257
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 573 KVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 628
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 629 LSVICHHGTASSGHYIAYCRNNLNNLW 655
>gi|148679976|gb|EDL11923.1| ubiquitin specific peptidase 33, isoform CRA_a [Mus musculus]
Length = 901
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 97/261 (37%), Gaps = 67/261 (25%)
Query: 98 LVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQK 149
+ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 1 MTTFRNHCPHLDSVGEITKEDLIQKSLGACQDCKVRGPNL--WACLENRCSYVGCGESQV 58
Query: 150 SHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH----------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 59 DHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTPPSLPHVRQPQQTQENSVQD 118
Query: 192 -----------------------------------VGLNNIKETDFVNVTIQSLMRVTPL 216
GL NI T ++N +Q+L PL
Sbjct: 119 FKIPSNPALKTPMVAVSEDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPL 178
Query: 217 RNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG 274
FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 179 TQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPANLFQGI-KTVNPTFRGY 236
Query: 275 VQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 237 SQQDAQEFLRCLMDLLHEELK 257
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 563 KVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 618
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 619 LSVICHHGTASSGHYIAYCRNNLNNLW 645
>gi|403365930|gb|EJY82756.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 828
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 157/393 (39%), Gaps = 76/393 (19%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYE--------INDPSLE-DIRHVGLNNIKETDFVNV 205
++ +G+ + +R + +P+G++ + +L D G+ N+ T F+N
Sbjct: 149 NNFSSGYDLETVIRDQDYRSIPNGFKNKLGVAFSTTEANLAMDAGLCGIYNMGNTCFLNT 208
Query: 206 TIQSLMRVTPLRNFFL--IPENYRHCKSPLVHR------FGDLTRKIWHARNFKGQVSPH 257
IQ L V PL +FFL + E + +P+ F +L + IW + K + P
Sbjct: 209 AIQCLSAVQPLTDFFLGDLHEQTINKTNPMGTSGEISIYFANLLKDIWRGKEEK--IYPQ 266
Query: 258 EFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKE 317
+ L KK + EF+++LL+ LH DL K ++ Q E++ K+
Sbjct: 267 KLL-------KKLNEFAPHQDAQEFLAYLLDCLHEDLNRADKFNNLKK---QKEIDHKKK 316
Query: 318 IPKNTISGNDQNTEK---------------GSDGGDDH--------------------DN 342
I T+ Q TE+ D DH
Sbjct: 317 IQSLTLG--KQETEQQENFAGYSEERQELIAYDAWKDHLFNNRSIIVDLFQGQLKSALKC 374
Query: 343 ITTETSRMPF-LMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHV-- 399
+T + + F + L +P P +K + V F + DG+ + + +
Sbjct: 375 LTCQHMSIKFDSFMYLSVPIPSGYKG-RNPTLEECVEEFTREEILDGDDKWKCPKCKINQ 433
Query: 400 -ARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKL 458
A + + +LP +I+H++RF + K V+FP+ NL L Y+ + ++
Sbjct: 434 RASKKIDIWKLPSILIVHLKRFEFHEKRYGKINDYVDFPLHNLNLTPYVS-----KLQRE 488
Query: 459 RSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+ YDL A H+G GG Y F + + +LW
Sbjct: 489 KPIYDLFAVSNHEGYLGGGHYYAFTKHRQNQLW 521
>gi|156366016|ref|XP_001626937.1| predicted protein [Nematostella vectensis]
gi|156213831|gb|EDO34837.1| predicted protein [Nematostella vectensis]
Length = 359
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 127/325 (39%), Gaps = 31/325 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL------IPENYRHCKSPLVHRFGDLTRKIW 245
VGL N+ T F+N +Q L L N L N K LV F DL + +W
Sbjct: 6 VGLRNLGNTCFMNSILQCLSSTWLLTNIVLKGTYVSSINNKSSMKGRLVQAFADLIKSMW 65
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK---KNTS 302
+ +S H F + + + RF Q + EF+ +LL LH DL + K
Sbjct: 66 KHDATESAISAHAFKTQIQRFA-PRFVGFNQQDAQEFLHFLLEGLHDDLNKVQEKPKYKM 124
Query: 303 IIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLGL 357
++ +LE K+ K I ++ G I E PF L L
Sbjct: 125 CEFDNSLSDLEKAKKAWKLYIERDNSLITDLFVGVLKSTLICLECGFKSVTFDPFWDLSL 184
Query: 358 DLP-------PPPLFKDVMEKNIIPQVPLFNILKKFDGE---TVTEVVRPHVARMRYRVT 407
+P + D + +I + LF + DG+ T + + + ++ V
Sbjct: 185 PIPRKSGSRYSSSRYTDGGDVDIRDCMELFTKEEVLDGDERPTCEKCKKKRKSTKKFTVQ 244
Query: 408 RLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKN-LELKDYIPLPTPKENEKLRSKYDLIA 466
R P+ +++H++RF+ F K T V FPV + EL ++ P+ E + Y L A
Sbjct: 245 RFPRILVIHLKRFSGYG-FRSKLQTNVVFPVTSPQELGEFAADPS----EGQSAVYSLYA 299
Query: 467 NIVHDGKPEGGFYRVFVQRKSEELW 491
H G GG Y + + W
Sbjct: 300 VSNHSGSTYGGHYTAYCKHPQSRQW 324
>gi|194376994|dbj|BAG63058.1| unnamed protein product [Homo sapiens]
Length = 271
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 102/237 (43%), Gaps = 37/237 (15%)
Query: 271 FRIGVQSNPVEFMSWLLNTLHSDLR---NTKKNTSIIYE----------CFQGELEVVKE 317
FR Q + EFM +LL+ LH +L+ N ++I+ E C G VV
Sbjct: 4 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTA 63
Query: 318 IPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNIIPQ 376
I G QN G TE+ + PFL L LD+P K + P
Sbjct: 64 I----FGGILQNEVNCLICG-------TESRKFDPFLDLSLDIPSQFRSKRSKNQENGPV 112
Query: 377 VPLFNILKKF-DGETV--TEVVRPHVARMR------YRVTRLPKYMILHMRRFTKNNFFV 427
L + L+ F D E + TE+ H + + + + +LPK + LH++RF +
Sbjct: 113 CSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLR 172
Query: 428 EKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
K T V FP++ L++K Y L P+ + YDL A +VH G G G Y +
Sbjct: 173 NKVDTYVEFPLRGLDMKCY--LLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYA 227
>gi|148679977|gb|EDL11924.1| ubiquitin specific peptidase 33, isoform CRA_b [Mus musculus]
Length = 909
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 97/261 (37%), Gaps = 67/261 (25%)
Query: 98 LVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQK 149
+ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 1 MTTFRNHCPHLDSVGEITKEDLIQKSLGACQDCKVRGPNL--WACLENRCSYVGCGESQV 58
Query: 150 SHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH----------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 59 DHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTPPSLPHVRQPQQTQENSVQD 118
Query: 192 -----------------------------------VGLNNIKETDFVNVTIQSLMRVTPL 216
GL NI T ++N +Q+L PL
Sbjct: 119 FKIPSNPALKTPMVAVSEDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPL 178
Query: 217 RNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG 274
FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 179 TQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPANLFQGI-KTVNPTFRGY 236
Query: 275 VQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 237 SQQDAQEFLRCLMDLLHEELK 257
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 571 KVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 626
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 627 LSVICHHGTASSGHYIAYCRNNLNNLW 653
>gi|357197190|ref|NP_001239415.1| ubiquitin carboxyl-terminal hydrolase 33 isoform 3 [Mus musculus]
Length = 901
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 97/261 (37%), Gaps = 67/261 (25%)
Query: 98 LVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQK 149
+ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 1 MTTFRNHCPHLDSVGEITKEDLIQKSLGACQDCKVRGPNL--WACLENRCSYVGCGESQV 58
Query: 150 SHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH----------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 59 DHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTPPSLPHVRQPQQTQENSVQD 118
Query: 192 -----------------------------------VGLNNIKETDFVNVTIQSLMRVTPL 216
GL NI T ++N +Q+L PL
Sbjct: 119 FKIPSNPALKTPMVAVSEDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPL 178
Query: 217 RNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG 274
FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 179 TQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPANLFQGI-KTVNPTFRGY 236
Query: 275 VQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 237 SQQDAQEFLRCLMDLLHEELK 257
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 563 KVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 618
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 619 LSVICHHGTASSGHYIAYCRNNLNNLW 645
>gi|42516565|ref|NP_963918.1| ubiquitin carboxyl-terminal hydrolase 33 isoform 2 [Homo sapiens]
gi|119626772|gb|EAX06367.1| ubiquitin specific peptidase 33, isoform CRA_a [Homo sapiens]
Length = 911
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 96/257 (37%), Gaps = 67/257 (26%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQKSHAY 153
R CP+LD+V + +K C V NL +ACL C G Q H+
Sbjct: 5 RNHCPHLDSVGEITKEDLIQKSLGTCQDCKVQGPNL--WACLENRCSYVGCGESQVDHST 62
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH--------------- 191
HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 63 IHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQDFKIP 122
Query: 192 -------------------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFF 220
GL NI T ++N +Q+L PL FF
Sbjct: 123 SNTTLKTPLVAVFDDLDIEADEEDELRARGLTGLKNIGNTCYMNAALQALSNCPPLTQFF 182
Query: 221 LIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSN 278
L R K P + + + L ++WH ++ G V P Q + K FR Q +
Sbjct: 183 LDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTTLFQGI-KTVNPTFRGYSQQD 240
Query: 279 PVEFMSWLLNTLHSDLR 295
EF+ L++ LH +L+
Sbjct: 241 AQEFLRCLMDLLHEELK 257
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 573 KVQNFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 628
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 629 LSVICHHGTASSGHYIAYCRNNLNNLW 655
>gi|148679978|gb|EDL11925.1| ubiquitin specific peptidase 33, isoform CRA_c [Mus musculus]
Length = 897
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 97/261 (37%), Gaps = 67/261 (25%)
Query: 98 LVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQK 149
+ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 1 MTTFRNHCPHLDSVGEITKEDLIQKSLGACQDCKVRGPNL--WACLENRCSYVGCGESQV 58
Query: 150 SHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH----------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 59 DHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTPPSLPHVRQPQQTQENSVQD 118
Query: 192 -----------------------------------VGLNNIKETDFVNVTIQSLMRVTPL 216
GL NI T ++N +Q+L PL
Sbjct: 119 FKIPSNPALKTPMVAVSEDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPL 178
Query: 217 RNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG 274
FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 179 TQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPANLFQGI-KTVNPTFRGY 236
Query: 275 VQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 237 SQQDAQEFLRCLMDLLHEELK 257
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 563 KVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 618
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 619 LSVICHHGTASSGHYIAYCRNNLNNLW 645
>gi|354468064|ref|XP_003496487.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Cricetulus
griseus]
Length = 898
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 97/261 (37%), Gaps = 67/261 (25%)
Query: 98 LVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQK 149
+ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 1 MTTFRNHCPHLDSVGEITKEDLIQKSHGACQDCKVRGPNL--WACLENRCSYVGCGESQV 58
Query: 150 SHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH----------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 59 DHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTPPSLPHVRQPPQTQENSVQD 118
Query: 192 -----------------------------------VGLNNIKETDFVNVTIQSLMRVTPL 216
GL NI T ++N +Q+L PL
Sbjct: 119 FKIPSNTALKTPLVAVFEDLDIEVDEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPL 178
Query: 217 RNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG 274
FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 179 TQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPANLFQGI-KTVNPTFRGY 236
Query: 275 VQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 237 SQQDAQEFLRCLMDLLHEELK 257
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 564 KVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 619
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 620 LSVICHHGTASSGHYIAYCRNNLNNLW 646
>gi|116008150|ref|NP_573510.2| ubiquitin carboxyl-terminal hydrolase 33 isoform 1 [Mus musculus]
gi|281312489|sp|Q8R5K2.2|UBP33_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 33; AltName:
Full=Deubiquitinating enzyme 33; AltName: Full=Ubiquitin
thioesterase 33; AltName:
Full=Ubiquitin-specific-processing protease 33; AltName:
Full=VHL-interacting deubiquitinating enzyme 1
gi|148921994|gb|AAI46303.1| Ubiquitin specific peptidase 33 [synthetic construct]
gi|151556748|gb|AAI48746.1| Ubiquitin specific peptidase 33 [synthetic construct]
Length = 909
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 97/261 (37%), Gaps = 67/261 (25%)
Query: 98 LVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQK 149
+ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 1 MTTFRNHCPHLDSVGEITKEDLIQKSLGACQDCKVRGPNL--WACLENRCSYVGCGESQV 58
Query: 150 SHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH----------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 59 DHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTPPSLPHVRQPQQTQENSVQD 118
Query: 192 -----------------------------------VGLNNIKETDFVNVTIQSLMRVTPL 216
GL NI T ++N +Q+L PL
Sbjct: 119 FKIPSNPALKTPMVAVSEDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPL 178
Query: 217 RNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG 274
FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 179 TQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPANLFQGI-KTVNPTFRGY 236
Query: 275 VQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 237 SQQDAQEFLRCLMDLLHEELK 257
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 571 KVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 626
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 627 LSVICHHGTASSGHYIAYCRNNLNNLW 653
>gi|18698437|gb|AAL78316.1|AF383174_1 pVHL-interacting deubiquitinating enzyme 1 [Mus musculus]
Length = 909
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 97/261 (37%), Gaps = 67/261 (25%)
Query: 98 LVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQK 149
+ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 1 MTTFRNHCPHLDSVGEITKEDLIQKSLGACQDCKVRGPNL--WACLENRCSYVGCGESQV 58
Query: 150 SHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH----------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 59 DHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTPPSLPHVRQPQQTQENSVQD 118
Query: 192 -----------------------------------VGLNNIKETDFVNVTIQSLMRVTPL 216
GL NI T ++N +Q+L PL
Sbjct: 119 FKIPSNPALKTPMVAVSEDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPL 178
Query: 217 RNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG 274
FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 179 TQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPANLFQGI-KTVNPTFRGY 236
Query: 275 VQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 237 SQQDAQEFLRCLMDLLHEELK 257
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 571 KVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 626
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 627 LSVICHHGTASSGHYIAYCRNNLNNLW 653
>gi|344237481|gb|EGV93584.1| Ubiquitin carboxyl-terminal hydrolase 33 [Cricetulus griseus]
Length = 910
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 97/261 (37%), Gaps = 67/261 (25%)
Query: 98 LVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQK 149
+ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 1 MTTFRNHCPHLDSVGEITKEDLIQKSHGACQDCKVRGPNL--WACLENRCSYVGCGESQV 58
Query: 150 SHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH----------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 59 DHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTPPSLPHVRQPPQTQENSVQD 118
Query: 192 -----------------------------------VGLNNIKETDFVNVTIQSLMRVTPL 216
GL NI T ++N +Q+L PL
Sbjct: 119 FKIPSNTALKTPLVAVFEDLDIEVDEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPL 178
Query: 217 RNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG 274
FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 179 TQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPANLFQGI-KTVNPTFRGY 236
Query: 275 VQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 237 SQQDAQEFLRCLMDLLHEELK 257
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 572 KVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 627
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 628 LSVICHHGTASSGHYIAYCRNNLNNLW 654
>gi|116008148|ref|NP_001070144.1| ubiquitin carboxyl-terminal hydrolase 33 isoform 2 [Mus musculus]
Length = 897
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 97/261 (37%), Gaps = 67/261 (25%)
Query: 98 LVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQK 149
+ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 1 MTTFRNHCPHLDSVGEITKEDLIQKSLGACQDCKVRGPNL--WACLENRCSYVGCGESQV 58
Query: 150 SHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH----------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 59 DHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTPPSLPHVRQPQQTQENSVQD 118
Query: 192 -----------------------------------VGLNNIKETDFVNVTIQSLMRVTPL 216
GL NI T ++N +Q+L PL
Sbjct: 119 FKIPSNPALKTPMVAVSEDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPL 178
Query: 217 RNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG 274
FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 179 TQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPANLFQGI-KTVNPTFRGY 236
Query: 275 VQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 237 SQQDAQEFLRCLMDLLHEELK 257
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 563 KVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 618
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 619 LSVICHHGTASSGHYIAYCRNNLNNLW 645
>gi|157131752|ref|XP_001662320.1| ubiquitin specific protease [Aedes aegypti]
gi|108871397|gb|EAT35622.1| AAEL012219-PA [Aedes aegypti]
Length = 648
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 131/323 (40%), Gaps = 42/323 (13%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRH-------CKSPLVHRFGDLTRKI 244
GL N+ T ++N +Q L T L +FL E ++ + + + + +
Sbjct: 308 TGLKNLGNTCYMNSILQCLSNTTFLNEYFL-EEQFKQNLNRNNKTQGRIAEEVAAVIKAL 366
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR--------- 295
W + +K S + L+ V+ +++F Q + E ++ L++ LHSDL+
Sbjct: 367 WTGQ-YKCIASKN--LRFVVGQYERQFGGIEQQDSHELLTILMDWLHSDLQTVPIEIDTS 423
Query: 296 --NTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFL 353
N + E F+G+ V ++ I + G + T E+ F
Sbjct: 424 LENLPASERAWVEYFKGKESYVAQLSYGQIKSMVKCVRCGKESA------TYES----FS 473
Query: 354 MLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYM 413
L LDLP D ++ + ++ ++ G + VA + ++RLP +
Sbjct: 474 SLSLDLPS-----DANRCDLSDCLDMYFNGERIMGWNCPQCKSSQVAIKKLDISRLPSIL 528
Query: 414 ILHMRRFTKN----NFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRS-KYDLIANI 468
++H +RF + + +K V FP+ +L++ ++ N KL+S +Y L
Sbjct: 529 VIHFKRFYADPEALSTVYKKKQNYVKFPLTDLDMSPHVAPSEKTRNHKLKSRRYHLYGVS 588
Query: 469 VHDGKPEGGFYRVFVQRKSEELW 491
H G E G Y F + K W
Sbjct: 589 NHYGSMESGHYTAFCRNKLHNKW 611
>gi|297296433|ref|XP_001107612.2| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Macaca mulatta]
gi|75076336|sp|Q4R6D3.1|UBP50_MACFA RecName: Full=Putative ubiquitin carboxyl-terminal hydrolase 50;
AltName: Full=Deubiquitinating enzyme 50; AltName:
Full=Ubiquitin thioesterase 50; AltName:
Full=Ubiquitin-specific-processing protease 50
gi|67969991|dbj|BAE01342.1| unnamed protein product [Macaca fascicularis]
Length = 373
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 131/326 (40%), Gaps = 60/326 (18%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPENYRHCKSPLVHRFGDLTRKIWHA 247
GL N+ T ++N +Q L ++PL +FL I C S + F L +W
Sbjct: 44 TGLRNLGNTCYMNAILQCLCSISPLVEYFLSGKYITALQNDC-SEVATAFAYLMTDMWLG 102
Query: 248 RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYEC 307
+ VSP E ++ + F Q + EF+ ++LN LH L+
Sbjct: 103 DS--DCVSP-EIFRSALGNLYPAFTKKTQQDAQEFLIYVLNELHEALKK----------- 148
Query: 308 FQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETS--------RMPFLMLGLDL 359
P+ ++ EKGS ITTETS ++ + ++ L
Sbjct: 149 --------YHYPRR------RSHEKGSAQRCCRKWITTETSVITQLFEGQLNYSIVCLKC 194
Query: 360 PPPPLFKDVMEKNIIP-----QVPLFNILKKF-DGETVTEVVRPHVA--------RMRYR 405
+V +P + L + L+ F +T+T + H + +R
Sbjct: 195 EKCTYKNEVFTVLSLPIPSEYECSLQDCLQCFFQQDTLTWNNQIHCSFCETKQETAVRAG 254
Query: 406 VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLI 465
+++ PK +I H++RF K T +++P+ NL+L YI P ++ KY+L
Sbjct: 255 ISKAPKIIIFHLKRFDIQGTTKRKLRTDIHYPLTNLDLTPYI-CPIFRK----YPKYNLC 309
Query: 466 ANIVHDGKPEGGFYRVFVQRKSEELW 491
A + H G +GG Y F + + W
Sbjct: 310 AVVNHFGDLDGGHYTAFCKNSFTQAW 335
>gi|74180673|dbj|BAE25565.1| unnamed protein product [Mus musculus]
Length = 880
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 97/261 (37%), Gaps = 67/261 (25%)
Query: 98 LVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQK 149
+ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 1 MTTFRNHCPHLDSVGEITKEDLIQKSLGACQDCKVRGPNL--WACLENRCSYVGCGESQV 58
Query: 150 SHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH----------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 59 DHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTPPSLPHVRQPQQTQENSVQD 118
Query: 192 -----------------------------------VGLNNIKETDFVNVTIQSLMRVTPL 216
GL NI T ++N +Q+L PL
Sbjct: 119 FKIPSNPALKTPMVAVSEDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPL 178
Query: 217 RNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG 274
FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 179 TQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPANLFQGI-KTVNPTFRGY 236
Query: 275 VQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 237 SQQDAQEFLRCLMDLLHEELK 257
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 571 KVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 626
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 627 LSVICHHGTASSGHYIAYCRNNLNNLW 653
>gi|75055226|sp|Q5REG5.1|UBP33_PONAB RecName: Full=Ubiquitin carboxyl-terminal hydrolase 33; AltName:
Full=Deubiquitinating enzyme 33; AltName: Full=Ubiquitin
thioesterase 33; AltName:
Full=Ubiquitin-specific-processing protease 33
gi|55726137|emb|CAH89842.1| hypothetical protein [Pongo abelii]
Length = 914
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 97/255 (38%), Gaps = 63/255 (24%)
Query: 102 RRDCPYLDTV---NRQVLDFDFEKFCS-VSLSNLNVYACLV--CGKYYQGRGQKSHAYTH 155
R CP+LD+V ++ L + C + N++ACL C G Q H+ H
Sbjct: 5 RNHCPHLDSVGEITKEDLIQKSQGTCQDCKVRGPNLWACLENRCSYVGCGESQVDHSTIH 64
Query: 156 SLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH----------------- 191
S E H++ +NL T +V+C E+ PSL +R
Sbjct: 65 SQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQDFKIPSN 124
Query: 192 -----------------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI 222
GL NI T ++N +Q+L PL FFL
Sbjct: 125 TTLKTPLVAVFDDLDIEVDEEDELRARGLTGLKNIGNTCYMNAALQALSNCPPLTQFFLD 184
Query: 223 PENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPV 280
R K P + + + L ++WH ++ G V P Q + K FR Q +
Sbjct: 185 CGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTNLFQGI-KTVNPTFRGYSQQDAQ 242
Query: 281 EFMSWLLNTLHSDLR 295
EF+ L++ LH +L+
Sbjct: 243 EFLRCLMDLLHEELK 257
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 572 KVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 627
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 628 LSVICHHGTASSGHYIAYCRNNLNNLW 654
>gi|402855020|ref|XP_003892146.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Papio anubis]
gi|380786519|gb|AFE65135.1| ubiquitin carboxyl-terminal hydrolase 33 isoform 1 [Macaca mulatta]
Length = 911
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 96/257 (37%), Gaps = 67/257 (26%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQKSHAY 153
R CP+LD+V + +K C V NL +ACL C G Q H+
Sbjct: 5 RNHCPHLDSVGEITKEDLIQKSHGTCQDCKVRGPNL--WACLENRCSYVGCGESQVDHST 62
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH--------------- 191
HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 63 IHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQDFKIP 122
Query: 192 -------------------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFF 220
GL NI T ++N +Q+L PL FF
Sbjct: 123 SNTTLKTPLVAVFDDLDIEVDEEDELRARGLTGLKNIGNTCYMNAALQALSNCPPLTQFF 182
Query: 221 LIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSN 278
L R K P + + + L ++WH ++ G V P Q + K FR Q +
Sbjct: 183 LDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTNLFQGI-KTVNPTFRGYSQQD 240
Query: 279 PVEFMSWLLNTLHSDLR 295
EF+ L++ LH +L+
Sbjct: 241 AQEFLRCLMDLLHEELK 257
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 573 KVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 628
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 629 LSVICHHGTASSGHYIAYCRNNLNNLW 655
>gi|209413794|ref|NP_001124855.1| ubiquitin carboxyl-terminal hydrolase 33 [Pongo abelii]
Length = 910
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 96/257 (37%), Gaps = 67/257 (26%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQKSHAY 153
R CP+LD+V + +K C V NL +ACL C G Q H+
Sbjct: 5 RNHCPHLDSVGEITKEDLIQKSHGTCQDCKVRGPNL--WACLENRCSYVGCGESQVDHST 62
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH--------------- 191
HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 63 VHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQDFKIP 122
Query: 192 -------------------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFF 220
GL NI T ++N +Q+L PL FF
Sbjct: 123 SNTTLKTPLVAVFDDLDIEVDEEDELRARGLTGLKNIGNTCYMNAALQALSNCPPLTQFF 182
Query: 221 LIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSN 278
L R K P + + + L ++WH ++ G V P Q + K FR Q +
Sbjct: 183 LDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTNLFQGI-KTVNPTFRGYSQQD 240
Query: 279 PVEFMSWLLNTLHSDLR 295
EF+ L++ LH +L+
Sbjct: 241 AQEFLRCLMDLLHEELK 257
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 572 KVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 627
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 628 LSVICHHGTASSGHYIAYCRNNLNNLW 654
>gi|417413151|gb|JAA52921.1| Putative ubiquitin carboxyl-terminal hydrolase 33, partial
[Desmodus rotundus]
Length = 927
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 99/260 (38%), Gaps = 63/260 (24%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKFCSVS----LSNLNVYACLV--CGKYYQGRGQKS 150
++ R CP+LD+V + +K S + N++ACL C G Q
Sbjct: 22 KMSGFRNHCPHLDSVGEITKEDLIQKSHSTCQDCKVRGPNLWACLENRCSYVGCGESQVD 81
Query: 151 HAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRHV----------- 192
H+ HS E H++ +NL T +V+C E+ PSL +R +
Sbjct: 82 HSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRPLHQTQDNSVQDF 141
Query: 193 -----------------------------------GLNNIKETDFVNVTIQSLMRVTPLR 217
GL NI T ++N +Q+L PL
Sbjct: 142 KIPSNTTLKTPLVAVFDDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPLT 201
Query: 218 NFFL-IPENYRHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGV 275
FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 202 QFFLDCGGLVRTDKKPAICKSYLKLMTELWH-KSRPGSVVPTNLFQGI-KTVNPTFRGYS 259
Query: 276 QSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 260 QQDAQEFLRCLMDLLHEELK 279
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 589 KVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 644
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 645 LSVICHHGTASSGHYIAYCRNNLNNLW 671
>gi|443897977|dbj|GAC75315.1| ubiquitin C-terminal hydrolase [Pseudozyma antarctica T-34]
Length = 1070
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 135/331 (40%), Gaps = 37/331 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHC---------KSPLVHRFGDLTR 242
GL N+ + ++N T+Q L PL F L+ +Y+ + L L
Sbjct: 717 TGLKNLGNSCYMNSTLQCLSATIPLARF-LLDGSYKQAINRTNPLGTQGQLAMALAGLIH 775
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTS 302
+W + VSP F +A+ + + FR Q + EF++ LL+ LH DL +
Sbjct: 776 VMWGEK--YAFVSPVTFREAMARFAPS-FRGYDQHDSQEFLAILLDGLHEDLNYVVTRPA 832
Query: 303 IIYECFQGELEVVKEIPKNTISGNDQNTEKGSDG--------GDDHDNIT------TETS 348
+ + E ++ + +P+ S + + + G + +T T T+
Sbjct: 833 AVEMTPEREAQL-ETLPQQVASVKEWAIYRMRNDSLVVDWFQGQFRNKLTCLTCGKTSTT 891
Query: 349 RMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTR 408
+ L L +P V + + +L K D +P A R ++R
Sbjct: 892 YEAYTYLSLPVPHGRGVGKVSLEQCLDAFVREEVLDKADMWNCPRCNKPRKATKRLSISR 951
Query: 409 LPKYMILHMRRFTKNNFFVEK-NPTLVNFPVKNLELKDYIPLPTPKENEKLRS------- 460
LP+ +++H++RF+ F +K + T+ ++L +Y+P P P + ++ S
Sbjct: 952 LPQILLIHLKRFSFKGPFTDKIDTTVTFPTTTPMDLTNYMPAPLPPGSGQVESGSQRPPY 1011
Query: 461 KYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+YDL A H G G Y V + S E W
Sbjct: 1012 RYDLYAVTHHFGSLNTGHYTATV-KSSGEWW 1041
>gi|308505570|ref|XP_003114968.1| CRE-USP-3 protein [Caenorhabditis remanei]
gi|308259150|gb|EFP03103.1| CRE-USP-3 protein [Caenorhabditis remanei]
Length = 547
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 141/321 (43%), Gaps = 61/321 (19%)
Query: 189 IRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-IPENYRHCKSPLVHRFG-----DLTR 242
R GL NI T F+N +Q+L + R + + +P + + + + G D R
Sbjct: 227 CRPRGLRNIGNTCFMNAVLQALASIYDFREYIMSLPSLEDYVEDEKLSKNGNCFLTDEYR 286
Query: 243 KI---WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK 299
K+ A+N++ +P+EF +A + A RFR Q + EF+ +LL+ L++++R +
Sbjct: 287 KLLISMSAKNYRDPTAPNEFREAFVSACP-RFRGFRQHDSHEFLRYLLDQLNTEMRKCRH 345
Query: 300 NTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMP------FL 353
+ ++P + ++ ++ E G ++ +T R F+
Sbjct: 346 ---------------LPDMPDDKVTPISKHFE-----GILQSSVICQTCRNCSNKMDEFM 385
Query: 354 MLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVT------ 407
L LD+P + K I ++ F E + + +P ++ + + T
Sbjct: 386 DLSLDVPR-------LSKARIRLSDCLDLF--FQKELLEKGEKPECSKCKSKQTCSKQMF 436
Query: 408 --RLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLI 465
+LP + LH++RF N K TL+ FP+ L + D++ +++++ YDL
Sbjct: 437 IKKLPDVLCLHIKRFRDNG---GKIDTLIEFPMAGLSVDDFL----TEDSDEPPCVYDLQ 489
Query: 466 ANIVHDG-KPEGGFYRVFVQR 485
+ IVH G G Y F +R
Sbjct: 490 SIIVHIGYGCSSGHYIAFGRR 510
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 120 FEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGY 179
F+ FC + + CL CG+ GR HA H GH V I+ T ++YC
Sbjct: 53 FKTFCDECDNCNKSFMCLFCGRILCGRNDSGHAIEHCENLGHPVVIDCITFELYCYSCDD 112
Query: 180 EIN---DPSL 186
E++ +PSL
Sbjct: 113 EVSLDFEPSL 122
>gi|417413175|gb|JAA52933.1| Putative ubiquitin carboxyl-terminal hydrolase 33, partial
[Desmodus rotundus]
Length = 935
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 99/260 (38%), Gaps = 63/260 (24%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKFCSVS----LSNLNVYACLV--CGKYYQGRGQKS 150
++ R CP+LD+V + +K S + N++ACL C G Q
Sbjct: 22 KMSGFRNHCPHLDSVGEITKEDLIQKSHSTCQDCKVRGPNLWACLENRCSYVGCGESQVD 81
Query: 151 HAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRHV----------- 192
H+ HS E H++ +NL T +V+C E+ PSL +R +
Sbjct: 82 HSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRPLHQTQDNSVQDF 141
Query: 193 -----------------------------------GLNNIKETDFVNVTIQSLMRVTPLR 217
GL NI T ++N +Q+L PL
Sbjct: 142 KIPSNTTLKTPLVAVFDDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPLT 201
Query: 218 NFFL-IPENYRHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGV 275
FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 202 QFFLDCGGLVRTDKKPAICKSYLKLMTELWH-KSRPGSVVPTNLFQGI-KTVNPTFRGYS 259
Query: 276 QSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 260 QQDAQEFLRCLMDLLHEELK 279
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 597 KVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 652
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 653 LSVICHHGTASSGHYIAYCRNNLNNLW 679
>gi|194211186|ref|XP_001498483.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Equus
caballus]
Length = 961
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 99/262 (37%), Gaps = 67/262 (25%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQ 148
++ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 49 KMSTFRNHCPHLDSVGEITKEDLIQKSHGTCQDCKVRGPNL--WACLENRCSYVGCGESQ 106
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRHV--------- 192
H+ HS E H++ +NL T +V+C E+ PSL +R +
Sbjct: 107 VDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRPLHQTQDNSIQ 166
Query: 193 -------------------------------------GLNNIKETDFVNVTIQSLMRVTP 215
GL NI T ++N +Q+L P
Sbjct: 167 DFKIPSNTTLKTPLVAVFDDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPP 226
Query: 216 LRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
L FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 227 LTQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTNLFQGI-KTVNPTFRG 284
Query: 274 GVQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 285 YSQQDAQEFLRCLMDLLHEELK 306
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 623 KVQKFPEILCIHLKRFRHELMFSTKINTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 678
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 679 LSVICHHGTASSGHYIAYCRNNLNNLW 705
>gi|395822081|ref|XP_003784352.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Otolemur
garnettii]
Length = 1125
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 96/257 (37%), Gaps = 67/257 (26%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQKSHAY 153
R CP+LD+V + +K C V NL +ACL C G Q H+
Sbjct: 227 RNYCPHLDSVGEITKEDLIQKSHGTCQDCKVRGPNL--WACLENRCSYVGCGESQVDHST 284
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH--------------- 191
HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 285 IHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPLQTQENSVQDFKIP 344
Query: 192 -------------------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFF 220
GL NI T ++N +Q+L PL FF
Sbjct: 345 TNTTLKTPLVAVFEDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPLTQFF 404
Query: 221 LIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSN 278
L R K P + + + L ++WH ++ G V P Q + K FR Q +
Sbjct: 405 LDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTNLFQGI-KTVNPTFRGYSQQD 462
Query: 279 PVEFMSWLLNTLHSDLR 295
EF+ L++ LH +L+
Sbjct: 463 AQEFLRCLMDLLHEELK 479
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 787 KVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPTQ----IVTYDL 842
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 843 LSVICHHGTASSGHYIAYCRNNLNNLW 869
>gi|428179085|gb|EKX47957.1| hypothetical protein GUITHDRAFT_106044 [Guillardia theta CCMP2712]
Length = 353
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 138/326 (42%), Gaps = 34/326 (10%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY----RHCKS-PLVHRFGDLTRKIWH 246
VGL+N+ T F+N +Q L+ PL +F+ E R KS LV + L + +W
Sbjct: 12 VGLSNLGNTCFMNSVLQCLVNTAPLSAYFVADEYSGELNRSSKSWQLVDDYASLAKDMWR 71
Query: 247 -ARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIY 305
A N ++P + + +++ F Q + E + +LL+ L L K+ Y
Sbjct: 72 TAGNTHTSINPSALKMQISRWARQ-FSGYEQHDSQELLRFLLDGLQEGLMRPKREPPWPY 130
Query: 306 ECFQGELEVVKEIPKNTISGN-DQNTEKGSD--GGDDHDNITTETSRM------PFLMLG 356
+ E + E + +N + +D G +T T + PF+
Sbjct: 131 DDKDFEKRAIAEQSRRMWENYLARNNSQITDIFCGQLRSRVTCATCKRESNCYDPFM--D 188
Query: 357 LDLPPPPLFKDVME-KNIIPQVPLFNILKKFDGET---------VTEVVRPHVARMRYRV 406
L LP P F+ + + ++ + L + L++F E + + VA ++
Sbjct: 189 LSLPIPKKFQGLSKWRSSAQECKLQDCLEQFVDEEKLEGNEMYYCSRCKKHQVAIKEMKI 248
Query: 407 TRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIA 466
R P ++LH++RF K + K V FP +LEL Y+ +P + S +DL
Sbjct: 249 FRCPLVLVLHLKRFDKRSSSRSKLNASVRFPTASLELAPYMSSDSPDLST---STFDLYG 305
Query: 467 NI-VHDGKPEGGFYRVFVQRKSEELW 491
+++ + + G ++ F R + LW
Sbjct: 306 ETSLYENEEDDGRFQGF--RNIQALW 329
>gi|55731067|emb|CAH92249.1| hypothetical protein [Pongo abelii]
Length = 789
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 96/257 (37%), Gaps = 67/257 (26%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQKSHAY 153
R CP+LD+V + +K C V NL +ACL C G Q H+
Sbjct: 5 RNHCPHLDSVGEITKEDLIQKSHGTCQDCKVRGPNL--WACLENRCSYVGCGESQVDHST 62
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH--------------- 191
HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 63 VHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQDFKIP 122
Query: 192 -------------------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFF 220
GL NI T ++N +Q+L PL FF
Sbjct: 123 SNTTLKTPLVAVFDDLDIEVDEEDELRARGLTGLKNIGNTCYMNAALQALSNCPPLTQFF 182
Query: 221 LIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSN 278
L R K P + + + L ++WH ++ G V P Q + K FR Q +
Sbjct: 183 LDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTNLFQGI-KTVNPTFRGYSQQD 240
Query: 279 PVEFMSWLLNTLHSDLR 295
EF+ L++ LH +L+
Sbjct: 241 AQEFLRCLMDLLHEELK 257
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 572 KVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 627
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 628 LSVICHHGTASSGHYIAYCRNNLNNLW 654
>gi|299689340|pdb|3N3K|A Chain A, The Catalytic Domain Of Usp8 In Complex With A Usp8
Specific Inhibitor
Length = 396
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 147/384 (38%), Gaps = 105/384 (27%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI+ S IR++ GL N+ T ++N +Q L
Sbjct: 28 RENKPTCYPKA-EISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 86
Query: 216 LRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ---VSPHEFLQAVM 264
L ++F + N K + FG + + +W GQ +SP +F +
Sbjct: 87 LADYFNRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDFKITIG 141
Query: 265 KASKKRFRIGVQSNPVEFMSWLLNTLHSDL----------------------------RN 296
K + + F Q + E + +L++ LH DL ++
Sbjct: 142 KINDQ-FAGYSQQDSQELLLFLMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEHAWQKH 200
Query: 297 TKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLG 356
+ N SII FQG+ + + + SR +
Sbjct: 201 KQLNESIIVALFQGQFKSTVQCL-----------------------TCHKKSRTFEAFMY 237
Query: 357 LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR--------VT 407
L LP K ++ + L+ F E +T+ R + + R R +
Sbjct: 238 LSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIW 287
Query: 408 RLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIAN 467
+LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK N K KY+L +
Sbjct: 288 KLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNNLK---KYNLFSV 342
Query: 468 IVHDGKPEGGFYRVFVQRKSEELW 491
H G +GG Y + + + + W
Sbjct: 343 SNHYGGLDGGHYTAYCKNAARQRW 366
>gi|367010522|ref|XP_003679762.1| hypothetical protein TDEL_0B04220 [Torulaspora delbrueckii]
gi|359747420|emb|CCE90551.1| hypothetical protein TDEL_0B04220 [Torulaspora delbrueckii]
Length = 825
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 130/339 (38%), Gaps = 48/339 (14%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRH--------CKSPLVHRFGDLTRK 243
VGL N+ + ++N +Q L+ L N FL RH K L F LT
Sbjct: 463 VGLENMGNSCYINCIVQCLLGTHELTNIFLNKSYERHINMNSRLGSKGVLAKYFAKLTHS 522
Query: 244 IW----HARNFKGQ-VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK 298
++ H N KG+ V P EF A + FR Q + EF +LL+ LH DL
Sbjct: 523 MYQNASHKLNEKGKPVQPMEFKMACGTIN-SLFRESGQQDCQEFCQFLLDGLHEDLNQCG 581
Query: 299 KNTSIIYECFQGE-------LEVVKEIPKNTISGNDQNTEKGSDGGDDHDNI------TT 345
N + + E L + I D + G + T
Sbjct: 582 GNPPLKELSDEAEKMREKLSLRIASSIEWERFLTTDFSVIVDLFQGQYASQLRCQVCGLT 641
Query: 346 ETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---TVTEVVRPHVARM 402
T+ PF +L + +P NII F ++K + + + + +
Sbjct: 642 STTYQPFSVLSVPVP------HAKSCNIIDCFKEFTKVEKLETDEQWSCPRCKKKQPSTK 695
Query: 403 RYRVTRLPKYMILHMRRF----TKNNFFVEKNPTLVNFPVKNLELKDYIP------LPTP 452
+ +TRLP+ +I+H++RF KNN FV+ TL P + +P LPT
Sbjct: 696 KLTITRLPRNLIIHLKRFDNMMNKNNVFVKYPFTLDLTPYWANDFDGRLPPGVTEELPTR 755
Query: 453 KENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
++ K IA+ H G GG Y +V + + W
Sbjct: 756 GQSPPFNYKLYGIAS--HVGSLYGGHYTSYVDKGPKRGW 792
>gi|290993516|ref|XP_002679379.1| predicted protein [Naegleria gruberi]
gi|284092995|gb|EFC46635.1| predicted protein [Naegleria gruberi]
Length = 365
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 132/312 (42%), Gaps = 40/312 (12%)
Query: 190 RHVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-----IPENYRHCKSPLVHRFGDLTRKI 244
++ GL N T + N +Q+L P RN L IP+N + L+ DL ++
Sbjct: 36 KYFGLENFGNTCYANSVLQALYFCKPFRNHILNYYKTIPQN---SEPNLLVSLADLFYQL 92
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLN----TLHSDLRNTKKN 300
+ + G + P F+Q ++ + F+ +Q + EF+++LLN L +L+N +
Sbjct: 93 NNQKKKTGYLGPKAFIQR-LRLDNEMFKSLMQQDAQEFLNYLLNHFVEILQHELKNQESQ 151
Query: 301 TSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLP 360
T+ +L+ +K + G N + +N+T+ FL L +D+
Sbjct: 152 TND-----NEDLKKLKTFIHDIFEGTLINETRCIMC----ENVTSREE--SFLDLSVDVQ 200
Query: 361 PPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRF 420
+ + + + ILK + A+ ++ R P+ + + ++RF
Sbjct: 201 Q---YSSITQ--CLKNFSGMQILKSNNKFYCDRCCSHQEAQTSMKIKRQPQVLAIQLKRF 255
Query: 421 TKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGK-PEGGFY 479
N +K V FP LP ++EK+++ Y L A +VH G P G Y
Sbjct: 256 KYMNNNFKKLSYRVTFPFD-------FKLPNLSQDEKVKT-YKLFAAVVHIGSGPNCGHY 307
Query: 480 RVFVQRKSEELW 491
+ + +SEE W
Sbjct: 308 KCII--RSEERW 317
>gi|296208309|ref|XP_002751018.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Callithrix
jacchus]
Length = 1035
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 98/262 (37%), Gaps = 67/262 (25%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQ 148
++ + CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 132 KMSAFQNHCPHLDSVGEITKEDLIQKSHGTCQDCKVRGPNL--WACLENRCSYVGCGESQ 189
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH---------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 190 VDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQVQENNIQ 249
Query: 192 ------------------------------------VGLNNIKETDFVNVTIQSLMRVTP 215
GL NI T ++N +Q+L P
Sbjct: 250 DFKIPSNTTLKTPLVAVFDDLDIEVDEEDELRARGLTGLKNIGNTCYMNAALQALSNCPP 309
Query: 216 LRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
L FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 310 LTQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTNLFQGI-KTVNPTFRG 367
Query: 274 GVQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 368 YSQQDAQEFLRCLMDLLHEELK 389
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 697 KVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 752
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 753 LSVICHHGTASSGHYIAYCRNNLNNLW 779
>gi|444725487|gb|ELW66051.1| Ubiquitin carboxyl-terminal hydrolase 49 [Tupaia chinensis]
Length = 459
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 168/428 (39%), Gaps = 82/428 (19%)
Query: 121 EKFCSVSLSNL-NVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYC-LPDG 178
+K+C + + +V+ACL C GR + HA H + GH + + +R V+C L
Sbjct: 22 QKWCCLECATTESVWACLKCSHVACGRYIEDHALKHFEDTGHPLAMEVRDLYVFCYLCKD 81
Query: 179 YEINDPSLEDIRHV------------------GLNNIKETDFVNVTIQSLMRVTPLRNFF 220
Y +ND D++ + GL N+ T ++N +Q L + R F
Sbjct: 82 YVLNDNPEGDLKLLRSSLLAPRRQPAVAPGVTGLRNLGNTCYMNSILQVLSHLQKFRECF 141
Query: 221 --LIPENYRHC-------KSP------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMK 265
L P H K P L H L R +W + VSP L +V
Sbjct: 142 LNLDPSKTGHLSLELIQNKEPSSKHISLCHELHTLFRVMWSGK--WALVSPFAMLHSVWS 199
Query: 266 ASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGEL--EVVKEIPKNTI 323
FR Q + EF+ LL+ + +L + I+ Q +L +V+K + NTI
Sbjct: 200 LIPA-FRGYDQQDAQEFLCELLHKVQQELESEGAARRILIPFSQRKLTKQVLKVV--NTI 256
Query: 324 SGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIP----QVPL 379
+ Q + + ++ + T E PF L L+ P +EK +P + L
Sbjct: 257 F-HGQLLSQVTCVSCNYKSNTIE----PFWDLSLEFPER---YHCIEKGFVPLNQTECLL 308
Query: 380 FNILKKFDGETVTEVVRPHV----------------------ARMRYRVTRLPKYMILHM 417
+L KF T TE + V AR + + RLP+ + LH+
Sbjct: 309 TEMLAKF---TETEALEGRVYACDQCNSKRRKSNPKPLVLSEARKQLMIYRLPQVLRLHL 365
Query: 418 RRFTKNNF-FVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG 476
+RF + EK V F + L ++ Y +K YDL A ++H GK G
Sbjct: 366 KRFRWSGRNHREKIGVHVVFD-QVLTMEPYCCRDMLSSLDKETFAYDLSAVVMHHGKGFG 424
Query: 477 -GFYRVFV 483
G Y +
Sbjct: 425 SGHYTAYC 432
>gi|195169026|ref|XP_002025329.1| GL13296 [Drosophila persimilis]
gi|194108785|gb|EDW30828.1| GL13296 [Drosophila persimilis]
Length = 820
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 121/332 (36%), Gaps = 68/332 (20%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP---LVHRFGDLTRKIWHAR 248
GL NI T F+N IQ L T L F R + ++ F L +++W +
Sbjct: 495 CGLRNIGNTCFMNSVIQCLSHTTELTRFLRTHHGSRSSATKDQLILFEFAKLIQEMWTSS 554
Query: 249 NFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRN------------ 296
V+P + L+ A + + Q + EF+ + L++LHS L +
Sbjct: 555 VH--TVTPMD-LKRAFSAKHRMYSDYNQQDAQEFLRFFLDSLHSALNSGIKGETLNIDDN 611
Query: 297 --------------TKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDN 342
T+ S++ + F G+L K K T GN
Sbjct: 612 LSDNKKADLTWEWYTRHENSLVRDLFVGQL---KSTLKCTTCGN---------------- 652
Query: 343 ITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARM 402
T + PF L + LP K + + LF + DG+ + + R
Sbjct: 653 --TSVTFDPFWDLSVPLPSSSRCK------LEACLDLFIREEILDGDEMPTCSKCKTRRK 704
Query: 403 ---RYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLR 459
+ + R PKY+++H++RF++ + K +V FP + +L + + N
Sbjct: 705 CTKSFTIQRFPKYLVIHLKRFSETRW--SKLSNIVEFPTADRDLN----MASYGANSNSN 758
Query: 460 SKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y L A H G GG Y + W
Sbjct: 759 VHYSLYAISNHMGSTAGGHYTALCKHPVSRKW 790
>gi|195130331|ref|XP_002009605.1| GI15450 [Drosophila mojavensis]
gi|193908055|gb|EDW06922.1| GI15450 [Drosophila mojavensis]
Length = 1158
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 129/351 (36%), Gaps = 72/351 (20%)
Query: 175 LPDGYEIN-DPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE-NYRHCKSP 232
L +GY+ + D E + GL NI T F+N IQ L T L F N R S
Sbjct: 816 LDEGYKSSRDEKFEGL--CGLRNIGNTCFMNSVIQCLSHTTELTRFLRAHHTNTRTATSK 873
Query: 233 ---LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNT 289
+++ F L +++W + V+P E L+ + + Q + EF+ + L++
Sbjct: 874 DQQILYEFAKLIQEMWTSNVH--SVTPME-LKRAFSTKHRMYSDYNQQDAQEFLRFFLDS 930
Query: 290 LHSDLRN--------------------------TKKNTSIIYECFQGELEVVKEIPKNTI 323
LHS L + S+I + F G+L K K T
Sbjct: 931 LHSALNTGVKGETLNIDDNLSDNKKADLTWEWYARHENSLIRDLFVGQL---KSTLKCTT 987
Query: 324 SGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNIL 383
GN T + PF L + LP K + + LF
Sbjct: 988 CGN------------------TSVTFDPFWDLSVPLPSSSRCK------LEACLDLFIRE 1023
Query: 384 KKFDGETVTEVVRPHVARM---RYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKN 440
+ DG+ + + R + + R PKY+++H++RF++ + K +V FP +
Sbjct: 1024 EVLDGDEMPTCSKCKTRRKCTKSFTIQRFPKYLVIHLKRFSETRW--SKLSNIVEFPTAD 1081
Query: 441 LELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
EL + + N Y L A H G GG Y + W
Sbjct: 1082 RELN----MASYGANANSNVHYSLYAISNHMGSTAGGHYVAICKHPVSRKW 1128
>gi|432921873|ref|XP_004080264.1| PREDICTED: uncharacterized protein LOC101169567 [Oryzias latipes]
Length = 1080
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 125/311 (40%), Gaps = 50/311 (16%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
GL N+ T F+N +Q L PL N L E+ + C+ P + I
Sbjct: 113 AGLQNMGNTCFLNSALQCLTYTPPLANHMLSREHSKTCQEPGFCMMCTMQNHIIQVFANS 172
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-SDLRNTK-----KNTSIIY 305
G V + +K K FR G Q + EF+ + ++ + S L TK + T+ I+
Sbjct: 173 GNVIKPIGVLNELKRIAKHFRYGSQEDAHEFLRYTVDAMQKSCLPGTKLDRQTQATTFIH 232
Query: 306 ECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPL 364
+ F G L VK + +S D D PFL + L++ P
Sbjct: 233 QVFGGYLRSRVKCLSCKAVS-------------DTFD---------PFLDITLEIKMAPS 270
Query: 365 FKDVMEKNIIPQVPLFNILKKFDGETV---TEVVRPHVARMRYRVTRLPKYMILHMRRFT 421
+E+ + P+ + DGE T+ + A R+ + R P + L ++RF
Sbjct: 271 VSKALEQFVKPE--------QLDGENAYKCTKCKKMVTASKRFTIHRSPNVLTLSLKRFA 322
Query: 422 KNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG-KPEGGFYR 480
NF K V +P ++L+L+ ++ +++ Y L A +VH G G Y
Sbjct: 323 --NFTGGKITKDVKYP-ESLDLRPFM-----SQSQGEPQNYGLYAVLVHSGFSCHAGHYF 374
Query: 481 VFVQRKSEELW 491
++ + S W
Sbjct: 375 CYI-KASNGQW 384
>gi|403258399|ref|XP_003921756.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 33 [Saimiri boliviensis boliviensis]
Length = 1020
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 98/262 (37%), Gaps = 67/262 (25%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQ 148
++ + CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 132 KMSAFQNHCPHLDSVGEITKEDLIQKSHGTCQDCKVRGPNL--WACLENRCSYVGCGESQ 189
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH---------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 190 VDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQVQENNVQ 249
Query: 192 ------------------------------------VGLNNIKETDFVNVTIQSLMRVTP 215
GL NI T ++N +Q+L P
Sbjct: 250 DFKIPSNTTLKTPLVAVFDDLDIEVDEEDELRARGLTGLKNIGNTCYMNAALQALSNCPP 309
Query: 216 LRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
L FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 310 LTQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTNLFQGI-KTVNPTFRG 367
Query: 274 GVQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 368 YSQQDAQEFLRCLMDLLHEELK 389
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 705 KVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 760
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 761 LSVICHHGTASSGHYIAYCRNNLNNLW 787
>gi|344248884|gb|EGW04988.1| Transient receptor potential cation channel subfamily M member 7
[Cricetulus griseus]
Length = 2128
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 133/330 (40%), Gaps = 72/330 (21%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPENYRHCKSPLVHRFGDLTRKIWHAR 248
GL N+ T ++N +Q L ++PL +FL I + C S + F L +W
Sbjct: 1800 GLRNLGNTCYMNAILQCLCNISPLVEYFLSGKYITALQKDC-SEVTTAFAYLMTDMWLGD 1858
Query: 249 NFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-----------RNT 297
+ VSP FL A + + F Q + EF+ ++LN LH L R++
Sbjct: 1859 S--DCVSPEIFLSA-LGSLYPAFLKKTQQDAQEFLIYVLNELHEALKKHCRRRAYERRSS 1915
Query: 298 KK--------NTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSR 349
+K TSII F+G+L N T + + + T
Sbjct: 1916 QKCCRKVMASETSIITRLFEGQL-------------NYSITCLKCENCTYKNEVFTV--- 1959
Query: 350 MPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVA--------R 401
L LP P ++ ++ + F F +T+T + H +
Sbjct: 1960 -------LSLPIPSEYECSLQDCL----QCF-----FQQDTLTWNNQIHCSFCEIKQETA 2003
Query: 402 MRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSK 461
+R +++ PK ++ H++RF K T + +P+ NL++ YI P +++ K
Sbjct: 2004 VRATISKAPKIIVFHLKRFDIQGSVKRKLRTDIRYPLTNLDITPYI-CPVFRKH----PK 2058
Query: 462 YDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+L A + H G +GG Y F + + W
Sbjct: 2059 YNLCAVVNHFGDLDGGHYTAFCKNSVTQAW 2088
>gi|440905214|gb|ELR55625.1| Ubiquitin carboxyl-terminal hydrolase 33, partial [Bos grunniens
mutus]
Length = 929
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 99/262 (37%), Gaps = 67/262 (25%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQ 148
++ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 17 KMSSFRSHCPHLDSVGEITKEDLIQKSHGSCQDCKVRGPNL--WACLENRCSYVGCGESQ 74
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRHV--------- 192
H+ HS E H++ +NL T +V+C E+ PSL ++ +
Sbjct: 75 VDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVKPLHQIQENGVQ 134
Query: 193 -------------------------------------GLNNIKETDFVNVTIQSLMRVTP 215
GL NI T ++N +Q+L P
Sbjct: 135 DFKIPSNTTLKTPLVAVFDDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPP 194
Query: 216 LRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
L FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 195 LTQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTTLFQGI-KTVNPTFRG 252
Query: 274 GVQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 253 YSQQDAQEFLRCLMDLLHEELK 274
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 591 KVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 646
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 647 LSVICHHGTASSGHYIAYCRNNLNNLW 673
>gi|5689531|dbj|BAA83049.1| KIAA1097 protein [Homo sapiens]
Length = 980
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 98/262 (37%), Gaps = 67/262 (25%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQ 148
++ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 69 KMSAFRNHCPHLDSVGEITKEDLIQKSLGTCQDCKVQGPNL--WACLENRCSYVGCGESQ 126
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH---------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 127 VDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQ 186
Query: 192 ------------------------------------VGLNNIKETDFVNVTIQSLMRVTP 215
GL NI T ++N +Q+L P
Sbjct: 187 DFKIPSNTTLKTPLVAVFDDLDIEADEEDELRARGLTGLKNIGNTCYMNAALQALSNCPP 246
Query: 216 LRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
L FFL R K P + + + L ++W+ ++ G V P Q + K FR
Sbjct: 247 LTQFFLDCGGLARTDKKPAICKSYLKLMTELWY-KSRPGSVVPTTLFQGI-KTVNPTFRG 304
Query: 274 GVQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 305 YSQQDAQEFLRCLMDLLHEELK 326
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 642 KVQNFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 697
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 698 LSVICHHGTASSGHYIAYCRNNLNNLW 724
>gi|18698433|gb|AAL78314.1|AF383172_1 pVHL-interacting deubiquitinating enzyme 1 type I [Homo sapiens]
Length = 942
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 98/262 (37%), Gaps = 67/262 (25%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQ 148
++ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 31 KMSAFRNHCPHLDSVGEITKEDLIQKSLGTCQDCKVQGPNL--WACLENRCSYVGCGESQ 88
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH---------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 89 VDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQ 148
Query: 192 ------------------------------------VGLNNIKETDFVNVTIQSLMRVTP 215
GL NI T ++N +Q+L P
Sbjct: 149 DFKIPSNTTLKTPLVAVFDDLDIEADEEDELRARGLTGLKNIGNTCYMNAALQALSNCPP 208
Query: 216 LRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
L FFL R K P + + + L ++W+ ++ G V P Q + K FR
Sbjct: 209 LTQFFLDCGGLARTDKKPAICKSYLKLMTELWY-KSRPGSVVPTTLFQGI-KTVNPTFRG 266
Query: 274 GVQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 267 YSQQDAQEFLRCLMDLLHEELK 288
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 604 KVQNFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 659
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 660 LSVICHHGTASSGHYIAYCRNNLNNLW 686
>gi|195439036|ref|XP_002067437.1| GK16418 [Drosophila willistoni]
gi|194163522|gb|EDW78423.1| GK16418 [Drosophila willistoni]
Length = 1396
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 122/335 (36%), Gaps = 71/335 (21%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP----LVHRFGDLTRKIWHA 247
GL NI T F+N IQ L T L F R + ++H F L +++W
Sbjct: 1068 CGLRNIGNTCFMNSVIQCLSHTTELTRFLRTHHGSRSSSATKDQQILHEFAKLIQEMWTT 1127
Query: 248 RNFKGQVSPHEFLQAVMKASKKRFRIGV-QSNPVEFMSWLLNTLHSDLRN---------- 296
V+P E +A ++K R Q + EF+ + L++LHS L
Sbjct: 1128 NVH--TVTPMELKRAF--STKHRMYSDFNQQDAQEFLRFFLDSLHSALNTGVKGGEALNI 1183
Query: 297 -----------------TKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDD 339
T+ S++ + F G+L K K T GN
Sbjct: 1184 DDNLSDNKKADLTWDWYTRHENSLVRDLFVGQL---KSTLKCTTCGN------------- 1227
Query: 340 HDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---TVTEVVR 396
T + PF L + LPP + + LF + DG+ T ++
Sbjct: 1228 -----TSVTFDPFWDLSVPLPPSS-----SRCKLDACLDLFIREEVLDGDEMPTCSKCKT 1277
Query: 397 PHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENE 456
+ + + R PKY+++H++RF++ + K +V FP + EL + + N
Sbjct: 1278 RRKCKKSFTIQRFPKYLVIHLKRFSETRW--SKLLNVVEFPTSDRELN----MGSYGSNS 1331
Query: 457 KLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y L A H G GG Y + W
Sbjct: 1332 NSSVHYSLYAISNHMGSTAGGHYVALCKHPDSRKW 1366
>gi|224809307|ref|NP_038947.2| ubiquitin carboxyl-terminal hydrolase 21 [Mus musculus]
Length = 566
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 126/337 (37%), Gaps = 65/337 (19%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 211 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 268
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 269 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 326
Query: 303 IIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNIT------TETSRMPFLMLG 356
I+ +P G E+ DD N+ E S++ L +G
Sbjct: 327 IL---------ASGPVPSPPCRGGGALHEEPELSDDDRANLMWKRYLEREDSKIVDLFVG 377
Query: 357 -----------------------LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE 393
L LP P + ++ LF ++ + E
Sbjct: 378 QLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEELESENAPV 437
Query: 394 VVRPHVARMRYR------VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYI 447
R R + R V R P+ ++LH+ RF+ + ++K+ V+FP++ L L D+
Sbjct: 438 CDR---CRQKTRSTKKLTVQRFPRILVLHLNRFSTSRGSIKKSSVGVDFPLQRLSLGDF- 493
Query: 448 PLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQ 484
++ Y L A H G G Y +
Sbjct: 494 -----ASDKAGSPVYQLYALCNHSGSVHYGHYTALCR 525
>gi|193785704|dbj|BAG51139.1| unnamed protein product [Homo sapiens]
Length = 356
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 118/305 (38%), Gaps = 55/305 (18%)
Query: 183 DPSLEDIRHVGLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYRHCK 230
+ S I GL N+ T F+N +QSL + LRN H +
Sbjct: 65 NGSTTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR 124
Query: 231 S------PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMS 284
S LV F +W + SP V K FR Q + EFM
Sbjct: 125 SQGDNNVSLVEEFRKTLCALWQGS--QTAFSPESLFYVVWKIMPN-FRGYQQQDAHEFMR 181
Query: 285 WLLNTLHSDLR---NTKKNTSIIYE----------CFQGELEVVKEIPKNTISGNDQNTE 331
+LL+ LH +L+ N ++I+ E C G VV I G QN
Sbjct: 182 YLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAI----FGGILQNEV 237
Query: 332 KGSDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF-DGE 389
G TE+ + PFL L LD+P K + P L + L+ F D E
Sbjct: 238 NCLICG-------TESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLE 290
Query: 390 TV--TEVVRPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNL 441
+ TE+ H + + + + +LPK + LH++RF + K T V FP++ L
Sbjct: 291 ELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGL 350
Query: 442 ELKDY 446
++K Y
Sbjct: 351 DMKCY 355
>gi|349603765|gb|AEP99510.1| Ubiquitin carboxyl-terminal hydrolase 8-like protein, partial
[Equus caballus]
Length = 394
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 151/361 (41%), Gaps = 71/361 (19%)
Query: 176 PDGY---EINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTPLRNFF 220
P GY EI S IR++ GL N+ T ++N +Q L L ++F
Sbjct: 22 PTGYPKAEITRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYF 81
Query: 221 --------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ---VSPHEFLQAVMKASKK 269
+ N K + FG + + +W GQ +SP +F + K + +
Sbjct: 82 NRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDFKITIGKINDQ 136
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-------RNTKKNTSII--YECFQGELEVVKEIPK 320
F Q + E + +L++ LH DL R+ ++N + ++ + + K++ +
Sbjct: 137 -FAGYSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNE 195
Query: 321 NTISGNDQNTEKGSDGGDDHDNITTETSRMPF-LMLGLDLPPPPLFKDVMEKNIIPQVPL 379
+ I Q K + +T F + L LP K ++
Sbjct: 196 SIIVALFQGQFKSTV-----QCLTCHKKSRTFEAFMYLSLPLASTSKCTLQ--------- 241
Query: 380 FNILKKFDGE-TVTEVVRPHVARMRYR--------VTRLPKYMILHMRRFTKNNFFVEKN 430
+ L+ F E +T+ R + + R R + +LP +++H++RF+ + + +K
Sbjct: 242 -DCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKL 300
Query: 431 PTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEEL 490
T V+FP++NL+L Y+ PK N K KY+L + H G +GG Y + + + +
Sbjct: 301 QTSVDFPLENLDLSQYV--IGPKNNLK---KYNLFSVSNHYGGLDGGHYTAYCKNAARQR 355
Query: 491 W 491
W
Sbjct: 356 W 356
>gi|195482373|ref|XP_002102021.1| GE17938 [Drosophila yakuba]
gi|194189545|gb|EDX03129.1| GE17938 [Drosophila yakuba]
Length = 1409
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 129/350 (36%), Gaps = 72/350 (20%)
Query: 177 DGYEINDPSLEDIRH--VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-- 232
DGY+ S ++ GL NI T F+N IQ L L F R +
Sbjct: 1067 DGYKSASASRDEKSEGLCGLRNIGNTCFMNSVIQCLSHTQELTRFLRSHHGSRSSSTKDQ 1126
Query: 233 -LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGV-QSNPVEFMSWLLNTL 290
++H F L +++W + V+P E +A ++K R Q + EF+ + L++L
Sbjct: 1127 QILHEFAKLIQEMWTSNVH--TVTPMELKRAF--STKHRMYSDYNQQDAQEFLRFFLDSL 1182
Query: 291 HSDLRN--------------------------TKKNTSIIYECFQGELEVVKEIPKNTIS 324
HS L + T+ S++ + F G+L K K T
Sbjct: 1183 HSALNSGVKGETLNIDDNLSDNKKADLTWEWYTRHENSLVRDLFVGQL---KSTLKCTTC 1239
Query: 325 GNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILK 384
GN T + PF L + LP K + + LF +
Sbjct: 1240 GN------------------TSVTFDPFWDLSVPLPSSSRCK------LEACLDLFIREE 1275
Query: 385 KFDGETVTEVVRPHVARM---RYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNL 441
DG+ + + R + + R PKY+++H++RF++ + K +V FP +
Sbjct: 1276 VLDGDEMPTCAKCKTRRKCTKSFTIQRFPKYLVIHLKRFSETRW--SKLSNIVEFPTSDS 1333
Query: 442 ELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
EL + + N Y L A H G GG Y + W
Sbjct: 1334 ELN----MGSYGANSNSNVHYSLYAISNHMGSTAGGHYVALCKHPVSRKW 1379
>gi|345490133|ref|XP_001599439.2| PREDICTED: hypothetical protein LOC100114408 [Nasonia vitripennis]
Length = 823
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 122/320 (38%), Gaps = 37/320 (11%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRKIW 245
GL NI T F+N IQ L PL + L I K L+ F + +++W
Sbjct: 485 GLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQYLTDINTTTSSMKGALIKAFSQVIQELW 544
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSI- 303
N V L++ ++ RF Q + EF+ +LL LH D+ R T K I
Sbjct: 545 --ENDGDHVVNTSSLKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTVKPQPIH 602
Query: 304 --IYECFQGELEVVKEIPK----------NTISGNDQNTEKGSDGGDDHDNITTETSRMP 351
I + + ++ + + + G +++ + + DH ++T + P
Sbjct: 603 TDIPDSYSDSMKAAESWKRYLRSEDSTIVDVFVGQLRSSLRCTVC--DHVSVTLD----P 656
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPK 411
F L LP P V + +L + T ++ + + + PK
Sbjct: 657 FW--DLSLPIPSRSGTVRLNQCLEHFTREEVLDGDEKPTCSKCQMRRKCTKSFAIQKFPK 714
Query: 412 YMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHD 471
+++H++RF+ F K LV+FP+ LEL + P+ Y+L H
Sbjct: 715 ILVIHLKRFSPMERFRGKLSVLVDFPLTGLELSAFA---APRVQG---CTYNLYGVANHS 768
Query: 472 GKPEGGFYRVFVQRKSEELW 491
G G Y + + W
Sbjct: 769 GTTHSGHYTAYCKHPYSGEW 788
>gi|431897014|gb|ELK06278.1| Ubiquitin carboxyl-terminal hydrolase 33 [Pteropus alecto]
Length = 931
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 98/262 (37%), Gaps = 67/262 (25%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQ 148
++ R C +LD+V + EK C V NL +ACL C G Q
Sbjct: 30 KMSAFRSHCSHLDSVGEITKEDLIEKSHGTCQDCKVRGPNL--WACLENRCSYVGCGESQ 87
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRHV--------- 192
H+ HS E H++ +NL T +V+C E+ PSL +R +
Sbjct: 88 VDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRPLHQTPENSVQ 147
Query: 193 -------------------------------------GLNNIKETDFVNVTIQSLMRVTP 215
GL NI T ++N +Q+L P
Sbjct: 148 DFKIPSNTTLKTPLVAVFDDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPP 207
Query: 216 LRNFFL-IPENYRHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
L FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 208 LTQFFLDCGGLVRTDKKPAICKSYLKLMTELWH-KSRPGSVVPTSLFQGI-KTVNPTFRG 265
Query: 274 GVQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 266 YSQQDAQEFLRCLMDLLHEELK 287
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 593 KVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 648
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + W
Sbjct: 649 LSVICHHGTASSGHYIAYCRNNLNNHW 675
>gi|194373951|dbj|BAG62288.1| unnamed protein product [Homo sapiens]
Length = 565
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 149/384 (38%), Gaps = 105/384 (27%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI+ S IR++ GL N+ T ++N +Q L
Sbjct: 189 RENKPTCYPKA-EISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 247
Query: 216 LRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ---VSPHEFLQAVM 264
L ++F + N K + FG + + +W GQ +SP +F V
Sbjct: 248 LADYFNRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDFKITVG 302
Query: 265 KASKKRFRIGVQSNPVEFMSWLLNTLHSDL----------------------------RN 296
K + + F Q + E + +L++ LH DL ++
Sbjct: 303 KINDQ-FAGYSQQDSQELLLFLMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEHAWQKH 361
Query: 297 TKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLG 356
+ N SII FQG+ K+T+ + SR +
Sbjct: 362 KQLNESIIVALFQGQF-------KSTVQCL----------------TCHKKSRTFEAFMY 398
Query: 357 LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR--------VT 407
L LP K ++ + L+ F E +T+ R + + R R +
Sbjct: 399 LSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIW 448
Query: 408 RLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIAN 467
+LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK N K KY+L +
Sbjct: 449 KLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNNLK---KYNLFSV 503
Query: 468 IVHDGKPEGGFYRVFVQRKSEELW 491
H G +GG Y + + + + W
Sbjct: 504 SNHYGGLDGGHYTAYCKNAARQRW 527
>gi|410967706|ref|XP_003990358.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Felis catus]
Length = 1042
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 95/254 (37%), Gaps = 67/254 (26%)
Query: 105 CPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQKSHAYTHS 156
CP+LD+V + +K C V NL +ACL C G Q H+ HS
Sbjct: 147 CPHLDSVGEITKEDLMQKSHGTCQDCKVRGPNL--WACLENRCSYVGCGESQVDHSTIHS 204
Query: 157 LEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH------------------ 191
E H++ +NL T +V+C E+ PSL +R
Sbjct: 205 QETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRPPHQTQENSVQDFKIPSST 264
Query: 192 ----------------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP 223
GL NI T ++N +Q+L PL FFL
Sbjct: 265 TLKTPLVAVFDDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDC 324
Query: 224 ENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVE 281
R K P + + + L ++WH ++ G V P Q + K FR Q + E
Sbjct: 325 GGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTTLFQGI-KTVNPTFRGYSQQDAQE 382
Query: 282 FMSWLLNTLHSDLR 295
F+ L++ LH +L+
Sbjct: 383 FLRCLMDLLHEELK 396
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 704 KVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPVQ----IVTYDL 759
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 760 LSVICHHGTASSGHYIAYCRNNLNNLW 786
>gi|402874299|ref|XP_003900979.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Papio anubis]
Length = 373
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 130/315 (41%), Gaps = 38/315 (12%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPENYRHCKSPLVHRFGDLTRKIWHA 247
GL N+ T ++N +Q L ++PL +FL I C S + F L +W
Sbjct: 44 TGLRNLGNTCYMNAILQCLCSISPLVEYFLSGKYITALQNDC-SEVATAFAYLMTDMWLG 102
Query: 248 RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYEC 307
+ VSP E ++ + F Q + EF+ ++LN LH L+ +E
Sbjct: 103 DS--DCVSP-EIFRSALGNLYPAFTKKTQQDAQEFLIYVLNELHEALKKYHYPRRRSHE- 158
Query: 308 FQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPF---LMLGLDLPPPPL 364
+G + + I+ + +G ++ + + + + + L LP P
Sbjct: 159 -KGP---AQRCCRKWITTETSVITQLFEGQLNYSIVCLKCEKCTYKNEVFTVLSLPIPSE 214
Query: 365 FKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVA--------RMRYRVTRLPKYMILH 416
++ ++ + F F +T+T + H + +R +++ PK +I H
Sbjct: 215 YECSLQDCL----QCF-----FQQDTLTWNNQIHCSFCETKQETAVRAGISKAPKIIIFH 265
Query: 417 MRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG 476
++RF K T +++P+ NL+L YI P ++ KY+L A + H G +G
Sbjct: 266 LKRFDIQRTTKRKLRTDIHYPLTNLDLTPYI-CPIFRK----YPKYNLCAVVNHFGDLDG 320
Query: 477 GFYRVFVQRKSEELW 491
G Y F + + W
Sbjct: 321 GHYTAFCKNSFTQAW 335
>gi|426196486|gb|EKV46414.1| hypothetical protein AGABI2DRAFT_205603 [Agaricus bisporus var.
bisporus H97]
Length = 1106
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 138/344 (40%), Gaps = 56/344 (16%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTR------KIWH 246
GL N+ T ++N IQ L P FF EN + FG R K+ +
Sbjct: 746 GLKNLGNTCYMNAPIQCLSATVPFSRFFN--ENRWKNAINYTNPFGSKGRITSAFAKLLY 803
Query: 247 ARNFKGQ----VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNT 301
+GQ V+P EF +++ + + ++ Q + EF+S+L++ +H DL R K
Sbjct: 804 --QMRGQDLPYVTPIEFRKSICQL-RSQYDNSDQHDSQEFLSFLMDGIHEDLNRVIVKPK 860
Query: 302 SIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNIT--------------TET 347
+ ELE +P S + K + D T T
Sbjct: 861 WTQTPEQEAELE---RLPPLIASEREWKEWKARNDSIIVDYFQGQFRSRLQCLTCHQTST 917
Query: 348 SRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFN--ILKKFDGETVTEVVRPHVARMRYR 405
+ F +L L +P + +EK + LFN IL+K D + A
Sbjct: 918 TYNVFSILQLPIPHGRNGRVTIEKCLDA---LFNEEILEKDDAWDCPKCKTKRRASKTLS 974
Query: 406 VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKL------- 458
+ RLP +++H +RF N F +K T V +P+K+L+L +Y+P P P +K
Sbjct: 975 LARLPPVLLIHFKRFEANGRFSDKIDTFVEYPMKSLDLTNYMPAPLPPGADKSELNGGLP 1034
Query: 459 ------RS-----KYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
RS +YDL A H G G Y FV + ++
Sbjct: 1035 MSLEDPRSQLPPYRYDLYAVTNHYGNLTSGHYTSFVASRGGWMY 1078
>gi|313234636|emb|CBY10591.1| unnamed protein product [Oikopleura dioica]
Length = 482
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 95/448 (21%), Positives = 168/448 (37%), Gaps = 93/448 (20%)
Query: 105 CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVY 164
CP+ + +R+ + C ++ACL C + G +K H + H GH++
Sbjct: 30 CPHSEFFSREAISLLKCMLCRSRRGKHRLHACLHC--VFIGCFEKKHLHRHQKATGHNLS 87
Query: 165 INLRTEKVYCLPDGYEINDPSLEDIRHV-------------------------------- 192
I+L +C + D E +R
Sbjct: 88 IDLTFGNTHCASCRDYVYDDDFEKVRLACRNGHRNGIHQNLPVWEPEKIDLNFLGQHAKR 147
Query: 193 ------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR----HCKSPLVHR 236
GL N T F+NV IQ+L LR++FL+ ++ R S +V
Sbjct: 148 LTVDGRSTLGLRGLVNQGNTCFMNVVIQALTHSPVLRDYFLMEKHPRCSPSEISSCIVCE 207
Query: 237 FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGV-QSNPVEFMSWLLNTLHSDLR 295
F + ++ + N ++P+ L V + S+ + G Q + EF+ +L+ +H L+
Sbjct: 208 FSQIFQEFFSNEN-SNPMTPYRLLLLVWRNSE--YLAGYEQQDAHEFLIAVLDMIHERLQ 264
Query: 296 NTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLML 355
+ SI G E + I +G Q+ + G+ I P +
Sbjct: 265 PRIEGGSID---LTGHAE--RSIIDQVFTGYMQSNVVCNQCGNISQTID------PLRDI 313
Query: 356 GLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD-GETVTEVVRPHVARMRYR--------V 406
LD+P +P L + L KF E + + + + R +
Sbjct: 314 SLDIPQ------------VPSASLMDCLSKFTKKEQLGNASKINCKKCGKRQESSKQLTI 361
Query: 407 TRLPKYMILHMRRFTKNNFFV-EKNPTLVNFPVKNLELKDYIPLP-----TPKENEKLRS 460
+RLP LH++RF + K T V+FP K L++ ++ +P+ +
Sbjct: 362 SRLPVVACLHLKRFEQTATGSRSKVATPVSFP-KTLDMGPFMSSARNTSLSPEFCDSAHY 420
Query: 461 KYDLIANIVHDGKPEGGFYRVFVQRKSE 488
KY+L A + H G + G Y F+++ S
Sbjct: 421 KYELFAVVNHMGNLQSGHYTSFIRQTSS 448
>gi|302686404|ref|XP_003032882.1| hypothetical protein SCHCODRAFT_32018 [Schizophyllum commune H4-8]
gi|300106576|gb|EFI97979.1| hypothetical protein SCHCODRAFT_32018, partial [Schizophyllum
commune H4-8]
Length = 300
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 115/326 (35%), Gaps = 71/326 (21%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFF--------LIPENYRHCKSPLVHRFGDLTRKI 244
GL N+ T + N +Q L P FF + N K L F L ++
Sbjct: 4 GLKNLGNTCYANAPLQCLSATIPFAQFFKDTRWKNAINMHNTMGSKGVLSAAFAALVHQM 63
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK----- 299
W + + Q+ P EF++A+ +A ++++ Q + EF+S+LL+ +H DL K
Sbjct: 64 WSS---ESQLIPSEFMRAI-RAINEQYKGSDQHDSQEFLSFLLDGIHEDLNRILKRENYT 119
Query: 300 ----------------------------NTSIIYECFQGELEVVKEIPKNTISGNDQNTE 331
N SII + FQG+L +N
Sbjct: 120 RTPEQEAELERLPPQIASEQEWQAWRLRNDSIIVDYFQGQL---------------RNQV 164
Query: 332 KGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETV 391
K G T T+ F +L L +P K + L+K D
Sbjct: 165 KCLTCGQ------TSTTYNTFSILSLPVPHARAGGKAHLKQCLDAFFNSETLEKDDAWDC 218
Query: 392 TEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPT 451
A + RLP +++H++RF + F +K T V+FP+ P
Sbjct: 219 PRCKTKRSASKSLMLARLPPVLVIHLKRFEAHGRFSDKIDTFVDFPLNGASTS-----PE 273
Query: 452 PKENEKLRSKYDLIANIVHDGKPEGG 477
+ KYDL H G G
Sbjct: 274 DPRTQLPPYKYDLYGVTNHFGNLSSG 299
>gi|426215772|ref|XP_004002143.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Ovis aries]
Length = 912
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 97/257 (37%), Gaps = 67/257 (26%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQKSHAY 153
R CP+LD+V + +K C V NL +ACL C G Q H+
Sbjct: 5 RSHCPHLDSVGEITKEDLIQKSHGSCQDCKVRGPNL--WACLENRCSYVGCGESQVDHST 62
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRHV-------------- 192
HS E H++ +NL T +V+C E+ PSL ++ +
Sbjct: 63 IHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVKPLHQIQENGVQDFKIP 122
Query: 193 --------------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFF 220
GL NI T ++N +Q+L PL FF
Sbjct: 123 SNTTLKTPLVAVFDDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPLTQFF 182
Query: 221 LIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSN 278
L R K P + + + L ++WH ++ G V P Q + K FR Q +
Sbjct: 183 LDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTTLFQGI-KTVNPTFRGYSQQD 240
Query: 279 PVEFMSWLLNTLHSDLR 295
EF+ L++ LH +L+
Sbjct: 241 AQEFLRCLMDLLHEELK 257
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 574 KVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVNYDL 629
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 630 LSVICHHGTASSGHYIAYCRNNLNNLW 656
>gi|155372005|ref|NP_001094609.1| ubiquitin carboxyl-terminal hydrolase 33 [Bos taurus]
gi|281312480|sp|A6QNM7.1|UBP33_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 33; AltName:
Full=Deubiquitinating enzyme 33; AltName: Full=Ubiquitin
thioesterase 33; AltName:
Full=Ubiquitin-specific-processing protease 33
gi|151556801|gb|AAI48906.1| USP33 protein [Bos taurus]
gi|296489213|tpg|DAA31326.1| TPA: ubiquitin specific protease 33 [Bos taurus]
Length = 912
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 97/257 (37%), Gaps = 67/257 (26%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQKSHAY 153
R CP+LD+V + +K C V NL +ACL C G Q H+
Sbjct: 5 RSHCPHLDSVGEITKEDLIQKSHGSCQDCKVRGPNL--WACLENRCSYVGCGESQVDHST 62
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRHV-------------- 192
HS E H++ +NL T +V+C E+ PSL ++ +
Sbjct: 63 IHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVKPLHQIQENGVQDFKIP 122
Query: 193 --------------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFF 220
GL NI T ++N +Q+L PL FF
Sbjct: 123 SNTTLKTPLVAVFDDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPLTQFF 182
Query: 221 LIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSN 278
L R K P + + + L ++WH ++ G V P Q + K FR Q +
Sbjct: 183 LDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTTLFQGI-KTVNPTFRGYSQQD 240
Query: 279 PVEFMSWLLNTLHSDLR 295
EF+ L++ LH +L+
Sbjct: 241 AQEFLRCLMDLLHEELK 257
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 574 KVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPVQ----IVTYDL 629
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 630 LSVICHHGTASSGHYIAYCRNNLNNLW 656
>gi|348502126|ref|XP_003438620.1| PREDICTED: hypothetical protein LOC100709216 [Oreochromis
niloticus]
Length = 1174
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 122/311 (39%), Gaps = 49/311 (15%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
GL N+ T F+N +Q L PL N+ L E+ + C P + +
Sbjct: 84 AGLQNMGNTCFLNSALQCLTYTPPLANYMLTREHSKTCHEPGFCMMCTMQNHVIQVFANS 143
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-SDLRNTK-----KNTSIIY 305
G V + +K K FR G Q + EF+ + ++ + S L TK + TS I+
Sbjct: 144 GNVIKPIGVLNELKRIAKHFRYGSQEDAHEFLRYTVDAMQKSCLPGTKLDRQTQATSFIH 203
Query: 306 ECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPL 364
+ F G L VK + N + SD D PFL + L++ P
Sbjct: 204 QVFGGYLRSRVKCL----------NCKAVSDTFD------------PFLDITLEIKTAPN 241
Query: 365 FKDVMEKNIIPQVPLFNILKKFDGETV---TEVVRPHVARMRYRVTRLPKYMILHMRRFT 421
+E+ + P+ + DGE T+ + A R+ + R + L ++RF
Sbjct: 242 VSKALEQFVKPE--------QLDGENAYKCTKCKKMVTASKRFTIHRSANVLTLSLKRFA 293
Query: 422 KNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG-KPEGGFYR 480
NF K + VK LE D P + + E Y L A +VH G G Y
Sbjct: 294 --NFSGGK----ITKDVKYLEHLDLRPFMSQSQGEP--QLYGLYAVLVHSGFSCHAGHYF 345
Query: 481 VFVQRKSEELW 491
+++ + + +
Sbjct: 346 CYIKASNGQWY 356
>gi|332018399|gb|EGI58993.1| Ubiquitin carboxyl-terminal hydrolase 2 [Acromyrmex echinatior]
Length = 749
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 120/320 (37%), Gaps = 37/320 (11%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRKIW 245
GL NI T F+N IQ L PL + L I K L+ F +T ++W
Sbjct: 411 GLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQYLTDINTTTSSMKGALIKAFSQVTHELW 470
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSI- 303
V L++ ++ RF Q + EF+ +LL LH D+ R T K I
Sbjct: 471 EVGG--DHVVNTTALKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTTKLPPIH 528
Query: 304 -----IYECFQGELEVVKEIPKNTIS-------GNDQNTEKGSDGGDDHDNITTETSRMP 351
Y Q +E K ++ S G +++ + + DH ++T + P
Sbjct: 529 GDIPDSYTDMQKAVESWKRYLRSEDSTIVDVFVGQLRSSLRCTSC--DHVSVTLD----P 582
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPK 411
F L LP P V + +L + T ++ + + + PK
Sbjct: 583 FW--DLSLPIPARSGTVKLSQCLEHFTREEVLDGDEKPTCSKCQMRRKCTKSFSIQKFPK 640
Query: 412 YMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHD 471
+++H++RF+ F K +V+FP+ L+L + P Y+L H
Sbjct: 641 ILVIHLKRFSPMERFRGKLNVMVDFPLTGLDLSAFAAPRVPG------CTYNLYGVANHS 694
Query: 472 GKPEGGFYRVFVQRKSEELW 491
G G Y + + W
Sbjct: 695 GTTYSGHYTAYCKHPYSGEW 714
>gi|123455008|ref|XP_001315252.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
gi|121897923|gb|EAY03029.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
Length = 614
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 140/370 (37%), Gaps = 72/370 (19%)
Query: 156 SLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTP 215
S ++G Y+ + +P + PS + +GLNN+ T + N Q ++RV P
Sbjct: 254 SNDSGRRSYLLSKLSSNSTIPSKF---GPSKYYPKPIGLNNLGNTCYFNAATQCIIRVKP 310
Query: 216 LRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKAS 267
L +F L P N + K + + D ++ + + + +P AV+ +
Sbjct: 311 LTDFIFSPIFESQLNPSNKKSSKGKIAKAYKDFLLQMSTSSSRMAE-NPSNLRSAVI-SK 368
Query: 268 KKRFRIGVQSNPVEFMSWLLNTLHSDLRNT-----------------------KKNTSII 304
+RF Q + E+++ LL+ LH D+ + KN S I
Sbjct: 369 FRRFANYSQHDSQEYLNALLDGLHEDMNQSFGAGGNKPEIKITGDSNGWDLLLSKNDSPI 428
Query: 305 YECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPL 364
+ F GE E P+ T+R PFL L + +P
Sbjct: 429 VDMFYGEFFANTECPQCGY---------------------VSTNREPFLFLTVTIPKVS- 466
Query: 365 FKDVMEKNIIPQVPLFNIL---KKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFT 421
+ V ++++ + L K+ E ++VR A R + R+ +I+H++RF+
Sbjct: 467 YGSVNLEDLLSNFSQDDELDDKNKWKCEKCKKMVR---ATRRIGILRVADVIIVHLKRFS 523
Query: 422 KNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRV 481
+F K T V +P L + Y + Y L+ + H G GG Y
Sbjct: 524 DEGYFTTKIETEVKYPSL-LNMSRY-------AKDGHTGFYKLVGAVFHSGGLGGGHYTA 575
Query: 482 FVQRKSEELW 491
+S W
Sbjct: 576 AALDQSTNSW 585
>gi|391328793|ref|XP_003738868.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like
[Metaseiulus occidentalis]
Length = 334
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 130/316 (41%), Gaps = 47/316 (14%)
Query: 184 PSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-IPENYRHCKSPLVHRFGDLTR 242
PS E R++GL N T + N +Q+L P R L + + L+ DL
Sbjct: 16 PSTE--RYLGLVNFGNTCYCNSVLQALYYCKPFREKVLEYKAKNKRTRETLLTCLADLFH 73
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR--NTKKN 300
I + G ++P +F+ A ++ + F +Q + EF+++LLNT+ L+ + K
Sbjct: 74 NIHSHKKKTGTLAPKKFI-ARLRKDNEVFDNYLQQDAHEFLNYLLNTIGDLLQAESISKE 132
Query: 301 TSIIYECFQGEL-EVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDL 359
S ++E FQG L + + TIS D++ FL L +D+
Sbjct: 133 PSWVHEIFQGTLVNETRCLTCETISSKDED----------------------FLDLSVDI 170
Query: 360 PPPPLFKDVMEKNIIPQVPLFNILKKFDGE---TVTEVVRPHVARMRYRVTRLPKYMILH 416
P + F+ + GE + A+ +V +LP + LH
Sbjct: 171 SPNTSISHCLRG--------FSSTETLRGEHKYHCEQCNSKQEAQKSLKVKKLPPILALH 222
Query: 417 MRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGK-PE 475
++RF K +N L V LEL+ + ++L YDL+A +VH G P
Sbjct: 223 LKRF-KYTEQQNRNTKLSWRVVFPLELRLFNTSDDAVNGDRL---YDLVAIVVHCGTGPN 278
Query: 476 GGFYRVFVQRKSEELW 491
G Y V KS +W
Sbjct: 279 RGHYISIV--KSHGVW 292
>gi|145236731|ref|XP_001391013.1| ubiquitin carboxyl-terminal hydrolase [Aspergillus niger CBS
513.88]
gi|134075474|emb|CAK48035.1| unnamed protein product [Aspergillus niger]
Length = 490
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 85/409 (20%), Positives = 149/409 (36%), Gaps = 87/409 (21%)
Query: 134 YACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV- 192
Y CL CG+ G+K+H + + H Y+ R VYC G + D LE +R
Sbjct: 72 YTCLTCGEAMPMGGRKAH----TEKTSHQFYMESRARTVYCQACGDFVYDHGLERLRCST 127
Query: 193 --------------------------------------GLNNIKETDFVNVTIQSLMRVT 214
GL N+ +T ++NV +Q+L+
Sbjct: 128 TESALQVAKKRRFSDSSADELYIRSNASKRPCAKQGVRGLFNLGQTCYLNVILQTLLHDP 187
Query: 215 PLRNFFLIPENYRH-CKS------PLVHRFGDLTRKIWHARNFKGQVSPHEF-----LQA 262
L +FL + H C + + F D F P F L A
Sbjct: 188 ILNTYFLGNGHQPHDCTASDCVGCAVAEAFAD----------FNSSDKPEGFAALNLLLA 237
Query: 263 VMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRN-----TKKNTSIIYECFQGELEVVKE 317
+AS Q + E+ +L++ LH N K ++ F G+L
Sbjct: 238 SWRASSTLAGYQ-QQDAHEYYQFLVDKLHLSTENHREGHEKGCPCFFHKTFYGKL----- 291
Query: 318 IPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQV 377
+++++ + +D ++ + M G +P P +E P+
Sbjct: 292 --RSSVTCDKCGNVTRTDDPMVDLSLDVQVQAKKRAMGGTGVPSTPTLSGCLESYTSPEK 349
Query: 378 PLFNILK-KFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNF 436
+ + G T P A + R+ +LP + + ++RF EK ++F
Sbjct: 350 LMAGVYNCSHCGGT------PQKATKQLRIRKLPAILCMQLKRFEHTFSVSEKLEGKIDF 403
Query: 437 PVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQR 485
P+ ++ + Y P K ++ R YDL + +VH GK + G Y V+ ++
Sbjct: 404 PL-SINMLPYTTSPQAKV-DRSRFVYDLSSAVVHQGKLDAGHYYVYCRQ 450
>gi|18698435|gb|AAL78315.1|AF383173_1 pVHL-interacting deubiquitinating enzyme 1 type II [Homo sapiens]
gi|168278803|dbj|BAG11281.1| ubiquitin carboxyl-terminal hydrolase 33 [synthetic construct]
Length = 911
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 96/257 (37%), Gaps = 67/257 (26%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQKSHAY 153
R CP+LD+V + +K C V NL +ACL C G Q H+
Sbjct: 5 RNHCPHLDSVGEITKEDLIQKSLGTCQDCKVQGPNL--WACLENRCSYVGCGESQVDHST 62
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH--------------- 191
HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 63 IHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQDFKIP 122
Query: 192 -------------------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFF 220
GL NI T ++N +Q+L PL FF
Sbjct: 123 SNTTLKTPLVAVFDDLDIEADEEDELRARGLTGLKNIGNTCYMNAALQALSNCPPLTQFF 182
Query: 221 LIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSN 278
L R K P + + + L ++W+ ++ G V P Q + K FR Q +
Sbjct: 183 LDCGGLARTDKKPAICKSYLKLMTELWY-KSRPGSVVPTTLFQGI-KTVNPTFRGYSQQD 240
Query: 279 PVEFMSWLLNTLHSDLR 295
EF+ L++ LH +L+
Sbjct: 241 AQEFLRCLMDLLHEELK 257
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 573 KVQNFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 628
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 629 LSVICHHGTASSGHYIAYCRNNLNNLW 655
>gi|300797726|ref|NP_001178023.1| ubiquitin carboxyl-terminal hydrolase 33 [Rattus norvegicus]
Length = 897
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 99/260 (38%), Gaps = 66/260 (25%)
Query: 98 LVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLVCGKYYQGRGQ-KS 150
+ R CP+LD+V + +K C V NL +ACL Y G G+ +
Sbjct: 1 MTTFRNHCPHLDSVGEITKEDLIQKSHGACQDCKVRGPNL--WACLENRCSYVGCGESQD 58
Query: 151 HAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH------------ 191
H+ HS + H++ +NL T +V+C E+ PSL +R
Sbjct: 59 HSTIHSKKTKHYLTVNLTTLRVWCYACSKEVFLDRKLGTPPSLPHVRQPQQTQENSVQDF 118
Query: 192 ----------------------------------VGLNNIKETDFVNVTIQSLMRVTPLR 217
GL NI T ++N +Q+L PL
Sbjct: 119 KIPSNTALKTPLVAVFEDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPLT 178
Query: 218 NFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGV 275
FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 179 QFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPANLFQGI-KTVNPTFRGYS 236
Query: 276 QSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 237 QQDAQEFLRCLMDLLHEELK 256
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 563 KVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 618
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 619 LSVICHHGTASSGHYIAYCRNNLNNLW 645
>gi|332222240|ref|XP_003260275.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 33 [Nomascus leucogenys]
Length = 942
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 97/260 (37%), Gaps = 63/260 (24%)
Query: 97 RLVEVRRDCPYLDTV---NRQVLDFDFEKFCS-VSLSNLNVYACLV--CGKYYQGRGQKS 150
++ R CP+LD+V ++ L + C + N++ACL C G Q
Sbjct: 31 KMSAFRNYCPHLDSVGEITKEDLMQKSQGTCQDCKVRGPNLWACLENRCSYVGCGESQVD 90
Query: 151 HAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH------------ 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 91 HSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPQVRQPHQIQENSVQDF 150
Query: 192 ----------------------------------VGLNNIKETDFVNVTIQSLMRVTPLR 217
GL NI T ++N +Q+L PL
Sbjct: 151 KIPSNTTLKTPLVAVFDDLDIEVDEEDELRARGLTGLKNIGNTCYMNAALQALSNCPPLT 210
Query: 218 NFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGV 275
FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 211 QFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTNLFQGI-KTVNPTFRGYS 268
Query: 276 QSNPVEFMSWLLNTLHSDLR 295
Q + EF+ ++ LH D +
Sbjct: 269 QQDGQEFLRCFMDDLHEDXK 288
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 604 KVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 659
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 660 LSVICHHGTASSGHYIAYCRNNLNNLW 686
>gi|355728146|gb|AES09431.1| ubiquitin specific peptidase 8 [Mustela putorius furo]
Length = 487
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 152/366 (41%), Gaps = 69/366 (18%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI S IR++ GL N+ T ++N +Q L
Sbjct: 111 RENKPTCYPKA-EITRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 169
Query: 216 LRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ---VSPHEFLQAVM 264
L ++F + N K + FG + + +W GQ +SP +F +
Sbjct: 170 LADYFNRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDFKITIG 224
Query: 265 KASKKRFRIGVQSNPVEFMSWLLNTLHSDL-------RNTKKNTSII--YECFQGELEVV 315
K + + F Q + E + +L++ LH DL R+ ++N + ++ + +
Sbjct: 225 KINDQ-FAGYSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEHAWQKH 283
Query: 316 KEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPF-LMLGLDLPPPPLFKDVMEKNII 374
K++ ++ I Q K + +T F + L LP K ++
Sbjct: 284 KQLNESIIVALFQGQFKSTV-----QCLTCHKKSRTFEAFMYLSLPLASTSKCTLQ---- 334
Query: 375 PQVPLFNILKKFDGE-TVTEVVRPHVARMRYR--------VTRLPKYMILHMRRFTKNNF 425
+ L+ F E +T+ R + + R R + +LP +++H++RF+ +
Sbjct: 335 ------DCLRLFSKEEKLTDNNRFYCSHCRTRRDSLKKIEIWKLPPVLLVHLKRFSYDGR 388
Query: 426 FVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQR 485
+ +K T V+FP++NL+L Y+ PK N K KY+L + H G +GG Y + +
Sbjct: 389 WKQKLQTSVDFPLENLDLSQYV--IGPKNNLK---KYNLFSVSNHYGGLDGGHYTAYCKN 443
Query: 486 KSEELW 491
+ + W
Sbjct: 444 AARQRW 449
>gi|409048865|gb|EKM58343.1| hypothetical protein PHACADRAFT_140190 [Phanerochaete carnosa
HHB-10118-sp]
Length = 550
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 89/439 (20%), Positives = 157/439 (35%), Gaps = 103/439 (23%)
Query: 124 CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEIND 183
C ++LS + CL C ++ ++SH + H E GH + ++ +YCL + D
Sbjct: 62 CQITLSR--PFVCLQC--FHTACWRESHIHDHFREVGHSFCADSKSGAIYCLDCDDFVYD 117
Query: 184 PSLEDIRHV-----------------------------------------------GLNN 196
P+ + GL N
Sbjct: 118 PTFTSVLSSTSVTASERLMSGNLAKSRKEPYKPWIPDSKDNAALEGAVALPCQGRRGLLN 177
Query: 197 IKETDFVNVTIQSLMRVTPLRNFFLIPE------NYRHCKSPLVHRFGDLTRKIWHARNF 250
+ +T F+N +QS + LRNFFL + + + C S + R L +++ +
Sbjct: 178 LGQTCFLNAILQSFLANPLLRNFFLSDKHNEKLCSTKDCTSCEMDR---LFTEVYSGKG- 233
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH--SDLRNTKKNTSIIYECF 308
G + P FL KAS Q + EF LN +H S + I++ F
Sbjct: 234 -GPLGPISFLATTWKASPTELSGYAQQDAHEFFISALNQIHATSKGKTAASCICIVHTTF 292
Query: 309 QGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDV 368
G L+ +D E+ N+T+ T M + L ++ + +D+
Sbjct: 293 DGLLQ------------SDVRCERCG-------NVTSTTDPMFDISLEIEAKGSAIAQDI 333
Query: 369 MEKNIIPQVPLFNILKKFDGETVTEVVRPHV-ARMRYRVTRLPKYMILHMRRF---TKNN 424
+ + Q L L D HV A R + +LP + +RF T +
Sbjct: 334 TLASCLRQYTLPEKLALNDYTCGKCSKASHVRASKRLSIRKLPPVLSFQFKRFEHPTADK 393
Query: 425 FFVEKNPTLVNFPVKNLELKDYI--PLPTPKENEKLRS-------------KYDLIANIV 469
K + V FP +L + ++ + + K +S +YDL + +
Sbjct: 394 STARKIESPVRFPA-SLNMAEFTTHAMKSSAPGSKAKSTPDISNPGPDSLYEYDLFSVVC 452
Query: 470 HDGKPEGGFYRVFVQRKSE 488
H+G + G Y + + + E
Sbjct: 453 HEGSIDNGHYTCYTRHQDE 471
>gi|308808989|ref|XP_003081804.1| putative ubiquitin-specific protease (ISS) [Ostreococcus tauri]
gi|116060271|emb|CAL55607.1| putative ubiquitin-specific protease (ISS) [Ostreococcus tauri]
Length = 688
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 119/314 (37%), Gaps = 54/314 (17%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
GL N+ T F+N +Q L L +F L E+ ++ S + ++ + A N
Sbjct: 123 AGLANLGNTCFLNSVLQCLTHTPALAHFALSGEHKKYKTSGSFNAMYEIGEHVARALNSS 182
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL----------RNTKKNT 301
G+ + M+A K FR G Q + E LL+ +H + + T
Sbjct: 183 GRTIAPTAVVKNMRALSKTFRKGRQEDAHELARCLLDAMHKKCVELVKPKISPNSARGET 242
Query: 302 SIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPP 361
S +++ F G+L + T N + + PFL L L++
Sbjct: 243 SFVWKVFGGKLR--SRVNCKTCGRNSETFD-------------------PFLDLSLEVG- 280
Query: 362 PPLFKDVMEKNIIPQVPLFNILKKFDGETVTEV-------VRPHV--ARMRYRVTRLPKY 412
K+++ LF + DG+ + +PH A ++ V + P
Sbjct: 281 -------RAKSVLGAFKLFTHTEILDGDNKYKCEGKNPGQSKPHFTKASKQFTVDQAPNV 333
Query: 413 MILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIP-LPTPKENEKLRSKYDLIANIVHD 471
+ + ++RF F K V +P+ + D P L N K R+ YDL +VH
Sbjct: 334 LAVQLKRFAYVPFGRGKLSHFVEYPL----VLDVTPYLSDEDRNSKNRAVYDLYGVLVHA 389
Query: 472 GKPE-GGFYRVFVQ 484
G G Y FV+
Sbjct: 390 GSSSNSGHYYCFVK 403
>gi|326675880|ref|XP_693811.5| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Danio rerio]
Length = 1067
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 143/369 (38%), Gaps = 98/369 (26%)
Query: 180 EINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTPLRNFF------- 220
EI PS IR++ GL N+ T ++N +Q L + ++F
Sbjct: 711 EITRPSAAKIRNLNPVFGGQGPLLTGLRNLGNTCYMNSILQCLCNTVAMADYFNRNYYQD 770
Query: 221 -LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNP 279
+ N K + F + + +W + +K +SP +F + K + RF +
Sbjct: 771 DINRANILGHKGEVAEEFSVVMKALWLGQ-YK-MISPLDFKGTICKINS-RFSSYEHQDS 827
Query: 280 VEFMSWLLNTLHSDLRNTKK----------------------------NTSIIYECFQGE 311
E + +L++ LH DL K N SII FQG+
Sbjct: 828 QELLLFLMDGLHEDLNKADKRRGYKEEEIEHLDDVSAADLAWSKHKQLNESIIVALFQGQ 887
Query: 312 LEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEK 371
K+T+ H + T ET F+ L L++
Sbjct: 888 F-------KSTVQCM----------SCQHKSRTFET----FMYLTLEM------------ 914
Query: 372 NIIPQVPLFNILKKFDGET-VTEVVRPHV--------ARMRYRVTRLPKYMILHMRRFTK 422
+ L + LK F E +T+ R + A R ++ +LP +++H++RF
Sbjct: 915 TASSKCSLQDCLKLFHKEERLTDGNRFYCRHCKTHRDAIKRMQIWKLPPILLVHLKRFKY 974
Query: 423 NNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVF 482
+ EK TLV+FP+ NL+L Y+ PK N K KY+L A H G +GG Y +
Sbjct: 975 EGRWREKLQTLVDFPLDNLDLSQYV--IGPKNNLK---KYNLYAVSNHYGGMDGGHYTAY 1029
Query: 483 VQRKSEELW 491
+ ++ W
Sbjct: 1030 CKNPMKQRW 1038
>gi|406603343|emb|CCH45135.1| Ubiquitin carboxyl-terminal hydrolase [Wickerhamomyces ciferrii]
Length = 815
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 140/358 (39%), Gaps = 86/358 (24%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHC--------KSPLVHRFGDLTRK 243
GL NI T ++N IQ L+ P FFL H K + F +L +
Sbjct: 455 TGLYNIGNTCYMNSIIQCLLGTPPFLQFFLNGSYKEHVNINSKLGTKGIMAKFFAELAQA 514
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--------- 294
++ G+V + + + + F+ Q + EF++++L+ LH DL
Sbjct: 515 VFKQN---GRVYEPKNFKIAIGSLNTSFKNNDQQDCSEFLNFVLDGLHEDLNEEGNRPRL 571
Query: 295 -------------------------RNTKKNTSIIYECFQGE-LEVVKEIPKNTISGNDQ 328
R K N S + FQG+ L +K +
Sbjct: 572 GDLTTEEEELRERMPIRLASVIEWERYLKTNYSAVVALFQGQYLSQLKCL---------- 621
Query: 329 NTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQ-VPLFNILKKFD 387
E G TT T+ F +L L +P L + +EK + + + F L+ D
Sbjct: 622 --ECG----------TTSTTYQAFSVLSLPIPQE-LVQSPLEKISLKRCLEEFTKLEVLD 668
Query: 388 GE---TVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELK 444
G+ ++ + + + +TRLP +++H++RF K ++K T + +P + ++L
Sbjct: 669 GDDRWNCSKCKQLRKSTKKITITRLPSNLVIHLKRF-KTGVNLQKITTFIEYPFE-MDLT 726
Query: 445 DYIPLPTPKENEK------LRS-----KYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
DY P KE K LR KY+L H G GG Y +V + + + W
Sbjct: 727 DYWPKVVSKEESKKLLTFPLRGQTPPFKYNLYGVSNHSGTLVGGHYTSYVWKGTNKKW 784
>gi|254566709|ref|XP_002490465.1| Ubiquitin-specific protease [Komagataella pastoris GS115]
gi|238030261|emb|CAY68184.1| Ubiquitin-specific protease [Komagataella pastoris GS115]
gi|328350857|emb|CCA37257.1| ubiquitin carboxyl-terminal hydrolase 22/27/51 [Komagataella
pastoris CBS 7435]
Length = 502
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 88/413 (21%), Positives = 150/413 (36%), Gaps = 79/413 (19%)
Query: 124 CSVSLSNLNV-YACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEIN 182
C L +L+ Y CL C + G + HA H+ GH I+ +T ++C G +
Sbjct: 84 CRECLESLSCTYFCLQCS--HVGCWKNGHASAHTKSTGHVFGIDSQTGYIFCFRCGDYVG 141
Query: 183 DPSLEDIRHV----------------------------------GLNNIKETDFVNVTIQ 208
D LE IR G N+ T F++ +Q
Sbjct: 142 DQRLEFIRQSKQGERTEPIMNNLGTETIIDGSRPPSLKASTGLRGFINMGATCFMSSIVQ 201
Query: 209 SLMRVTPLRNFFLIPENYRHCKS--PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
+++ +R++FL + + K + D K+++ + P L A +
Sbjct: 202 TIVHNPFVRDYFLSGYHAKCTKKMDTCITCCIDEIFKVFYGTDETKGYGPTALLTAAWRV 261
Query: 267 SKKRFRIGVQSNPVEFMSWLLNT-------LHSDLRNTKKNTSIIYECFQGELEVVKEIP 319
K + + EF +LL+ LH +L +T I ++ F G+L+
Sbjct: 262 -KNSLAGYSEQDAHEFWQFLLDEIHKSDTELHPELDDTSTCRCITHKTFAGQLQSTVTCE 320
Query: 320 KNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPL 379
K S N + ML L L + KD + N + L
Sbjct: 321 KCLHSKNTVDP-----------------------MLDLSLEIAKISKDKVTLN--DCLDL 355
Query: 380 FNILKKFDGETVTEVVRPHVARMRYRVTR-LPKYMILHMRRFTKNNFFVEKNPTLVNFPV 438
F +K D T+ + R + + R LP + ++RF + K T V FP+
Sbjct: 356 FTSKEKLDSMTICSHCKKETTRTKQLLVRKLPPILAFQLKRFEHSASSSTKIETHVGFPL 415
Query: 439 KNLELKDYIPLPTPKENEKLRSK-----YDLIANIVHDGKPEGGFYRVFVQRK 486
L+++ Y T NE+ R+ Y L A ++H G G Y ++ +
Sbjct: 416 -FLDMEPYTVSETLNSNEQGRASWGLMTYQLFAIVIHIGSVNTGHYICIIKNR 467
>gi|118094484|ref|XP_422389.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Gallus gallus]
Length = 910
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 104/259 (40%), Gaps = 65/259 (25%)
Query: 98 LVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLVCGKYYQGRGQK-- 149
+ + +CP+L++V + +K C V NL +ACL Y G G+
Sbjct: 1 MSSLSSNCPHLESVGEITKEELIQKSHGSCQDCKVRGPNL--WACLENRCTYVGCGETHV 58
Query: 150 SHAYTHSLEAGHHVYINLRTEKVYC------------------LPDG--YEINDPSLEDI 189
H+ THS E H + +NL T +V+C LPD + + S++D
Sbjct: 59 DHSTTHSQETKHCLTVNLTTLRVWCYACSKEVFLDRKLGSHSPLPDARLTQTQENSVQDF 118
Query: 190 RH-------------------------------VGLNNIKETDFVNVTIQSLMRVTPLRN 218
+ GL NI T ++N +Q+L PL +
Sbjct: 119 KMPSIPTLKIPLSAVFDDLDIEVEEDELKTRGLTGLKNIGNTCYMNAALQALSNCPPLTH 178
Query: 219 FFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQ 276
FFL R K P + + + L ++WH +N G V P Q + K+ FR Q
Sbjct: 179 FFLDCGGLARTDKKPAICKSYLKLMTELWH-KNRPGSVVPTGLFQGI-KSVNPTFRGYSQ 236
Query: 277 SNPVEFMSWLLNTLHSDLR 295
+ EF+ L++ LH +L+
Sbjct: 237 QDAQEFLRCLMDLLHEELK 255
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 572 KVQKFPEILCIHLKRFRHELMFSTKIGTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 627
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 628 LSVICHHGTASSGHYIAYCRNNLNNLW 654
>gi|149026258|gb|EDL82501.1| rCG28827, isoform CRA_b [Rattus norvegicus]
Length = 672
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 99/260 (38%), Gaps = 66/260 (25%)
Query: 98 LVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLVCGKYYQGRGQ-KS 150
+ R CP+LD+V + +K C V NL +ACL Y G G+ +
Sbjct: 1 MTTFRNHCPHLDSVGEITKEDLIQKSHGACQDCKVRGPNL--WACLENRCSYVGCGESQD 58
Query: 151 HAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH------------ 191
H+ HS + H++ +NL T +V+C E+ PSL +R
Sbjct: 59 HSTIHSKKTKHYLTVNLTTLRVWCYACSKEVFLDRKLGTPPSLPHVRQPQQTQENSVQDF 118
Query: 192 ----------------------------------VGLNNIKETDFVNVTIQSLMRVTPLR 217
GL NI T ++N +Q+L PL
Sbjct: 119 KIPSNTALKTPLVAVFEDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPLT 178
Query: 218 NFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGV 275
FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 179 QFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPANLFQGI-KTVNPTFRGYS 236
Query: 276 QSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 237 QQDAQEFLRCLMDLLHEELK 256
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 563 KVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 618
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 619 LSVICHHGTASSGHYIAYCRNNLNNLW 645
>gi|149026259|gb|EDL82502.1| rCG28827, isoform CRA_c [Rattus norvegicus]
Length = 680
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 99/260 (38%), Gaps = 66/260 (25%)
Query: 98 LVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLVCGKYYQGRGQ-KS 150
+ R CP+LD+V + +K C V NL +ACL Y G G+ +
Sbjct: 1 MTTFRNHCPHLDSVGEITKEDLIQKSHGACQDCKVRGPNL--WACLENRCSYVGCGESQD 58
Query: 151 HAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH------------ 191
H+ HS + H++ +NL T +V+C E+ PSL +R
Sbjct: 59 HSTIHSKKTKHYLTVNLTTLRVWCYACSKEVFLDRKLGTPPSLPHVRQPQQTQENSVQDF 118
Query: 192 ----------------------------------VGLNNIKETDFVNVTIQSLMRVTPLR 217
GL NI T ++N +Q+L PL
Sbjct: 119 KIPSNTALKTPLVAVFEDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPLT 178
Query: 218 NFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGV 275
FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 179 QFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPANLFQGI-KTVNPTFRGYS 236
Query: 276 QSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 237 QQDAQEFLRCLMDLLHEELK 256
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 571 KVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 626
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 627 LSVICHHGTASSGHYIAYCRNNLNNLW 653
>gi|194763591|ref|XP_001963916.1| GF21001 [Drosophila ananassae]
gi|190618841|gb|EDV34365.1| GF21001 [Drosophila ananassae]
Length = 1296
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 120/332 (36%), Gaps = 68/332 (20%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP---LVHRFGDLTRKIWHAR 248
GL NI T F+N IQ L L F R + ++H F L +++W +
Sbjct: 971 CGLRNIGNTCFMNSVIQCLSHTQELTRFLRSHHGSRSSSTKDQQILHEFAKLIQEMWTSN 1030
Query: 249 NFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRN------------ 296
V+P E L+ + + Q + EF+ + L++LHS L +
Sbjct: 1031 VHT--VTPME-LKRAFSTKHRMYSDYNQQDAQEFLRFFLDSLHSALNSGVKGETLNIDDN 1087
Query: 297 --------------TKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDN 342
T+ S++ + F G+L K K T GN
Sbjct: 1088 LSDNKKADLTWEWYTRHENSLVRDLFVGQL---KSTLKCTTCGN---------------- 1128
Query: 343 ITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARM 402
T + PF L + LP K + + LF + DG+ + + R
Sbjct: 1129 --TSVTFDPFWDLSVPLPSSSRCK------LEACLDLFIREEVLDGDEMPTCAKCKTRRK 1180
Query: 403 ---RYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLR 459
+ + R PKY+++H++RF++ + K +V FP + EL + + N
Sbjct: 1181 CTKSFTIQRFPKYLVIHLKRFSETRW--SKLSNIVEFPTMDRELN----MGSYGANSNSN 1234
Query: 460 SKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y L A H G GG Y + W
Sbjct: 1235 VHYSLYAISNHMGSTAGGHYVALCKHPVSRKW 1266
>gi|409081251|gb|EKM81610.1| hypothetical protein AGABI1DRAFT_35800 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1121
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 138/344 (40%), Gaps = 56/344 (16%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTR------KIWH 246
GL N+ T ++N IQ L P FF EN + FG R K+ +
Sbjct: 761 GLKNLGNTCYMNAPIQCLSATVPFSRFFN--ENRWKNAINYTNPFGSKGRITSAFAKLLY 818
Query: 247 ARNFKGQ----VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNT 301
+GQ V+P EF +++ + + ++ Q + EF+S+L++ +H DL R K
Sbjct: 819 --QMRGQDLPYVTPIEFRKSICQL-RSQYDNSDQHDSQEFLSFLMDGIHEDLNRVIVKPK 875
Query: 302 SIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNIT--------------TET 347
+ ELE +P S + K + D T T
Sbjct: 876 WTQTPEQEAELE---RLPPLIASEREWKEWKARNDSIIVDYFQGQFRSRLQCLTCHQTST 932
Query: 348 SRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFN--ILKKFDGETVTEVVRPHVARMRYR 405
+ F +L L +P + +E+ + LFN IL+K D + A
Sbjct: 933 TYNVFSILQLPIPHGRNGRVTIERCLDA---LFNEEILEKDDAWDCPKCKTKRRASKTLS 989
Query: 406 VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKL------- 458
+ RLP +++H +RF N F +K T V +P+K+L+L +Y+P P P +K
Sbjct: 990 LARLPPVLLIHFKRFEANGRFSDKIDTFVEYPMKSLDLTNYMPAPLPPGADKSELNGGLP 1049
Query: 459 ------RS-----KYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
RS +YDL A H G G Y FV + ++
Sbjct: 1050 MSLEDPRSQLPPYRYDLYAVTNHYGNLTSGHYTSFVASRGGWMY 1093
>gi|10720332|sp|Q9QZL6.1|UBP21_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 21; AltName:
Full=Deubiquitinating enzyme 21; AltName: Full=Ubiquitin
thioesterase 21; AltName:
Full=Ubiquitin-specific-processing protease 21
gi|5853115|gb|AAD54322.1|AF177759_1 ubiquitin specific protease 16 [Mus musculus]
gi|18257320|gb|AAH21903.1| Ubiquitin specific peptidase 21 [Mus musculus]
Length = 566
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 126/337 (37%), Gaps = 65/337 (19%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 211 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 268
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 269 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 326
Query: 303 IIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNIT------TETSRMPFLMLG 356
I+ +P G E+ DD N+ E S++ L +G
Sbjct: 327 IL---------ASGPVPSPPRRGGGALHEEPELSDDDRANLMWKRYLEREDSKIVDLFVG 377
Query: 357 -----------------------LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE 393
L LP P + ++ LF ++ + E
Sbjct: 378 QLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEELESENAPV 437
Query: 394 VVRPHVARMRYR------VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYI 447
R R + R V R P+ ++LH+ RF+ + ++K+ V+FP++ L L D+
Sbjct: 438 CDR---CRQKTRSTKKLTVQRFPRILVLHLNRFSTSRGSIKKSSVGVDFPLQRLSLGDF- 493
Query: 448 PLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQ 484
++ Y L A H G G Y +
Sbjct: 494 -----ASDKAGSPVYQLYALCNHSGSVHYGHYTALCR 525
>gi|47210494|emb|CAF91634.1| unnamed protein product [Tetraodon nigroviridis]
Length = 842
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 94/242 (38%), Gaps = 53/242 (21%)
Query: 105 CPYLDTVNR----QVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQK--SHAYTHSLE 158
CP+LD V +++ + + N++ACL G Y G G+ H+ HS E
Sbjct: 1 CPHLDCVGEVTKEELIQKSHGQCQDCKVGGPNLWACLENGCMYVGCGESHADHSTMHSQE 60
Query: 159 AGHHVYINLRTEKVYCL-------------PDGYEINDPSL------------------- 186
H++ +NL T +V+C P +N+ L
Sbjct: 61 TRHNLTVNLTTLRVWCYACSKEVFLERKLGPHSLHVNNEMLPVAGSPTCLKMSTSGACED 120
Query: 187 -------EDIRH----VGLNNIKETDFVNVTIQSLMRVTPLRNFFL-IPENYRHCKSP-L 233
E+ H GL NI T ++N +Q+L PL FFL R K P L
Sbjct: 121 LDMEMEEEEDLHSRGLTGLKNIGNTCYMNAALQALSNCPPLTQFFLECGGMVRTDKKPAL 180
Query: 234 VHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSD 293
+ L +WH +N V P Q + K FR Q + EF+ L++ LH +
Sbjct: 181 CKSYQKLVSDLWH-KNSSSYVVPTTLFQGI-KTINPMFRGYSQQDSQEFLRCLMDQLHEE 238
Query: 294 LR 295
L+
Sbjct: 239 LK 240
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
++ LP+ + +H++RF F K T V+FP++ L+L+ ++ K++ + YDL
Sbjct: 555 KMQNLPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFL----AKDSSCQTTNYDL 610
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 611 LSVICHHGTASSGHYIAYCRNDGNNLW 637
>gi|281312481|sp|A5PMR2.1|UBP33_DANRE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 33; AltName:
Full=Deubiquitinating enzyme 33; AltName: Full=Ubiquitin
thioesterase 33; AltName:
Full=Ubiquitin-specific-processing protease 33
Length = 897
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 95/254 (37%), Gaps = 64/254 (25%)
Query: 104 DCPYLDTVNR----QVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQK--SHAYTHSL 157
DCP+L+ V +++ + + N++ACL G Y G G+ H+ HS
Sbjct: 8 DCPHLECVGEITKEELIQKSHGQCQDCKVGGPNLWACLENGCSYVGCGESHADHSTVHSQ 67
Query: 158 EAGHHVYINLRTEKVYC------------------LPDGYEINDP--------------- 184
E H++ +NL T +V+C LP+ + P
Sbjct: 68 ETRHNLTVNLTTLRVWCYACTKEVFLERKLGPHKQLPNAAKAVSPVQTPCQDLNTPGSPT 127
Query: 185 --------SLEDIRH-------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP 223
+ +D+ GL NI T ++N +Q+L PL FFL
Sbjct: 128 SLRVPSAGTCDDLDMETEEEDELRTRGLTGLKNIGNTCYMNAALQALSNCPPLTQFFLEC 187
Query: 224 ENYRHC--KSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVE 281
K L + L +WH +N V P Q + KA FR Q + E
Sbjct: 188 GGLVKTDKKPALCKSYQKLITDLWH-KNRNAYVVPTNLFQGI-KAVNPMFRGYSQQDSQE 245
Query: 282 FMSWLLNTLHSDLR 295
F+ L++ LH +L+
Sbjct: 246 FLRCLMDQLHEELK 259
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V LP+ + +H++RF F K T V+FP++ LE++ ++ K++ L + YDL
Sbjct: 559 KVQSLPEILCIHLKRFRHELMFSTKIGTHVSFPLEGLEMQPFL----AKDSSALTTTYDL 614
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + + +LW
Sbjct: 615 LSVICHHGTASSGHYIAYCRNELNQLW 641
>gi|5410230|gb|AAD42992.1|AF073344_1 ubiquitin-specific protease 3 [Homo sapiens]
Length = 521
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 105/457 (22%), Positives = 162/457 (35%), Gaps = 105/457 (22%)
Query: 124 CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAG----------------HHVYINL 167
CSV SN + + CL C + GR HA H +A H V ++
Sbjct: 29 CSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQVPLTNHKKSEKQDKVQHTVCMDC 88
Query: 168 RTEKVYCL-PDGYEINDPSLEDIRHV---------------------------------- 192
+ YC D + +ND L ++ V
Sbjct: 89 SSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHKKRKLLENSTLNSKLLK 148
Query: 193 -----------GLNNIKETDFVNVTIQSLMRV------------TPLRNFFLIPENYRHC 229
GL N+ T F+N +QSL + LRN H
Sbjct: 149 VNGSTTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHT 208
Query: 230 KS------PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFM 283
+S LV F +W + SP V K FR Q + EF
Sbjct: 209 RSQGDNNVSLVEEFRKTLCALWQGS--QTAFSPESLFYVVWKI-MPNFRGYQQQDAHEFN 265
Query: 284 SWLLNTLHSDLRNTKKNTSII-YECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDN 342
+ L L N + +++ + F + + ++ K I+G GG +
Sbjct: 266 A--LPFGPPTLGNFRAVSTVFPAQQFCRRILLCLQVNKCCINGAS-TVVTAIFGGILQNE 322
Query: 343 IT-----TETSRM-PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF-DGETV--TE 393
+ TE+ + PFL L LD+P K + P L + L+ F D E + TE
Sbjct: 323 VNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETE 382
Query: 394 VVRPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYI 447
+ H + + + + +LPK + LH++RF + K T V FP++ L++K Y
Sbjct: 383 LYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKWY- 441
Query: 448 PLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
L P+ + YDL A +VH G G G Y +
Sbjct: 442 -LLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYA 477
>gi|345560761|gb|EGX43880.1| hypothetical protein AOL_s00210g327 [Arthrobotrys oligospora ATCC
24927]
Length = 1191
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 114/287 (39%), Gaps = 39/287 (13%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP--------ENYRHCKSPLVHRFGDLTRK 243
GL N+ T ++N IQ + PL +FL EN + F +L R
Sbjct: 825 TGLKNLGNTCYMNSIIQCMSGTVPLARYFLSGFYKGHLNRENRLGSRGIFAEAFANLNRN 884
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W VSP ++ + +FR Q + E++ + L+ LH DL N
Sbjct: 885 LWE--ETYAFVSPVT-IKDISGRLNSQFRGKDQQDAQEYLEFFLDYLHEDL-NANAGKPR 940
Query: 304 IYECFQGELEVVKEIPKNTIS--------------------GNDQNTEKGSDGGDDHDNI 343
+ E E + +E+P S G ++ K G
Sbjct: 941 LRELTDDEEKRREELPVQLASYYEWERYVHTNLSMIVKWFQGQFRSRLKCLKCGH----- 995
Query: 344 TTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMR 403
T T+ PF+ L L +P K+ + + IL D +P A +
Sbjct: 996 -TSTTYSPFMYLSLPIPAKAGPNGCTLKDCMDEFTKEEILDGDDAWHCPVCKKPRKASKQ 1054
Query: 404 YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLP 450
++R+P +I+H++RF+ + + +K TLVNF K+++L Y+P P
Sbjct: 1055 LSISRMPVVLIIHLKRFSNHGMWRDKVNTLVNF-GKSVDLTRYVPPP 1100
>gi|432110442|gb|ELK34059.1| Ubiquitin carboxyl-terminal hydrolase 2 [Myotis davidii]
Length = 599
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 114/280 (40%), Gaps = 34/280 (12%)
Query: 228 HCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLL 287
H + L+ F L + IW + VSP EF + + + RF Q + EF+ +LL
Sbjct: 303 HAHTALMEEFAKLIQAIWTS-PLNDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLL 360
Query: 288 NTLHSDL-------RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDH 340
+ LH+++ ++T +N + + +G K + + D +
Sbjct: 361 DGLHNEVNRVTVRPKSTPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLRSSLTCT 420
Query: 341 DNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---------TV 391
D T PF L L + K P+V L + ++ F E T
Sbjct: 421 DCGHCSTVFDPFWDLSLPI----------AKRGYPEVTLMDCMRLFTKEDVLDGDEKPTC 470
Query: 392 TEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPT 451
++ + R PK ++LH++RF+++ K T V+FP+++L+L+++
Sbjct: 471 CRCRARRRCLKKFSIQRFPKVLVLHLKRFSESRVRTSKLTTFVSFPLRDLDLREFA---- 526
Query: 452 PKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
EN + Y+L A H G GG Y + + + W
Sbjct: 527 -SENTN-HAVYNLYAVSNHSGTTMGGHYTAYCRSPATGEW 564
>gi|328784869|ref|XP_392493.4| PREDICTED: hypothetical protein LOC408964 [Apis mellifera]
Length = 987
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 119/320 (37%), Gaps = 37/320 (11%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRKIW 245
GL NI T F+N IQ L PL + L I K L+ F + ++W
Sbjct: 649 GLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQYLADINTTTSSMKGALIKAFSQVIHELW 708
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSI- 303
V L++ ++ RF Q + EF+ +LL LH D+ R T K I
Sbjct: 709 EVGG--DLVVNTTALKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTVKPQPIH 766
Query: 304 -----IYECFQGELEVVKEIPKNTIS-------GNDQNTEKGSDGGDDHDNITTETSRMP 351
+Y Q +E K ++ S G +++ + DH ++T + P
Sbjct: 767 TDIPEMYTDSQKAVESWKRYLRSEDSMIVDVFVGQLRSSLHCTSC--DHVSVTLD----P 820
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPK 411
F L LP P V + +L + T ++ + + + PK
Sbjct: 821 FW--DLSLPIPARSGTVKLSQCLEHFTREEVLDGDEKPTCSKCQMRRKCTKSFSIQKFPK 878
Query: 412 YMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHD 471
+++H++RF+ F K +V+FP+ L+L + P Y+L H
Sbjct: 879 ILVIHLKRFSPMERFRSKLNVMVDFPLTGLDLSAFAAPRVPG------CTYNLYGVANHS 932
Query: 472 GKPEGGFYRVFVQRKSEELW 491
G G Y + + W
Sbjct: 933 GTTHSGHYTAYCKHPYSAEW 952
>gi|47086035|ref|NP_998392.1| ubiquitin carboxyl-terminal hydrolase 33 [Danio rerio]
gi|46362501|gb|AAH66557.1| Ubiquitin specific peptidase 33 [Danio rerio]
Length = 897
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 95/254 (37%), Gaps = 64/254 (25%)
Query: 104 DCPYLDTVNR----QVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQK--SHAYTHSL 157
DCP+L+ V +++ + + N++ACL G Y G G+ H+ HS
Sbjct: 8 DCPHLECVGEITKEELIQKSHGQCQDCKVGGPNLWACLENGCSYVGCGESHADHSTVHSQ 67
Query: 158 EAGHHVYINLRTEKVYC------------------LPDGYEINDP--------------- 184
E H++ +NL T +V+C LP+ + P
Sbjct: 68 ETRHNLTVNLTTLRVWCYACTKEVFLERKLGPHKQLPNAAKAVSPVQTPCQDLNTPGSPT 127
Query: 185 --------SLEDIRH-------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP 223
+ +D+ GL NI T ++N +Q+L PL FFL
Sbjct: 128 SLRVPSAGTCDDLDMETEEEDELRTRGLTGLKNIGNTCYMNAALQALSNCPPLTQFFLEC 187
Query: 224 ENYRHC--KSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVE 281
K L + L +WH +N V P Q + KA FR Q + E
Sbjct: 188 GGLVKTDKKPALCKSYQKLVTDLWH-KNRNSYVVPTNLFQGI-KAVNPMFRGYSQQDSQE 245
Query: 282 FMSWLLNTLHSDLR 295
F+ L++ LH +L+
Sbjct: 246 FLRCLMDQLHEELK 259
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V LP+ + +H++RF F K T V+FP++ LE++ ++ K++ L + YDL
Sbjct: 559 KVQSLPEILCIHLKRFRHELMFSTKIGTHVSFPLEGLEMQPFL----AKDSSALTTTYDL 614
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + + +LW
Sbjct: 615 LSVICHHGTASSGHYIAYCRNELNQLW 641
>gi|149042015|gb|EDL95856.1| rCG58374 [Rattus norvegicus]
Length = 471
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 106/465 (22%), Positives = 165/465 (35%), Gaps = 124/465 (26%)
Query: 104 DCPYLDTVNRQVLDFDFEKF---------CSVSLSNLNVYACLVCGKYYQGRGQKSHAYT 154
+CP+L + + D KF CSV SN + + CL C + GR HA
Sbjct: 2 ECPHLSS--SVCIAPDSAKFPNGSPSSWCCSVCRSNKSPWVCLTCSSVHCGRYVNGHAKK 59
Query: 155 H----------------SLEAGHHVYINLRTEKVYCL-PDGYEINDPSLEDIRHV----- 192
H +A H V ++ + YC D + +ND L ++ V
Sbjct: 60 HYEDAQIPLLNHKRSEKQEKAQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQ 119
Query: 193 ----------------------------------------GLNNIKETDFVNVTIQSLMR 212
GL N+ T F+N +QSL
Sbjct: 120 NLENSAFTADRHRKRKLLENSSLNSKLLKVNGSTAAICATGLRNLGNTCFMNAILQSLSN 179
Query: 213 VTPLRNFF--LIPENYRHCKSPLVHRFGDLTRKIWHARN-FKGQVSPHEFLQAVMKASKK 269
+ +F L R+ K+ R+ +H R+ VS E + + A +
Sbjct: 180 IEQFCCYFKELPAVELRNGKTA--------GRRTYHTRSQGDSNVSLVEEFRKTLCALWQ 231
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQN 329
+ + ++ W + + RN G VV I G QN
Sbjct: 232 GSQTAFSPESLFYVVW---KIMPNFRN-------------GASTVVTTI----FGGILQN 271
Query: 330 TEKGSDGGDDHDNITTETSRM-PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF-D 387
G TE+ + PFL L LD+P K + P L + L+ F D
Sbjct: 272 EVNCLICG-------TESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTD 324
Query: 388 GETV--TEVVRPHVARMR------YRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVK 439
E + TE+ H + + + + +LPK + LH++RF + K T V FP++
Sbjct: 325 LEELDETELYMCHKCKKKQKSTKKFWIQKLPKALCLHLKRFHWTAYLRNKVDTYVQFPLR 384
Query: 440 NLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
L++K Y L P+ + YDL A +VH G G G Y +
Sbjct: 385 GLDMKCY--LLEPENSGPDSCLYDLAAVVVHHGSGVGSGHYTAYA 427
>gi|340727179|ref|XP_003401926.1| PREDICTED: hypothetical protein LOC100649397 [Bombus terrestris]
Length = 977
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 120/320 (37%), Gaps = 37/320 (11%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRKIW 245
GL NI T F+N IQ L PL + L I + K L+ F + ++W
Sbjct: 639 GLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQYLADINTSTSSMKGALIKAFSQVIHELW 698
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSI- 303
V L++ ++ RF Q + EF+ +LL LH D+ R T K I
Sbjct: 699 EVGG--DLVVNTTALKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTVKPQPIH 756
Query: 304 -----IYECFQGELEVVKEIPKNTIS-------GNDQNTEKGSDGGDDHDNITTETSRMP 351
+Y Q +E K ++ S G +++ + DH ++T + P
Sbjct: 757 TDIPEMYTDSQKAVESWKRYLRSEDSMIVDVFVGQLRSSLHCTSC--DHVSVTLD----P 810
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPK 411
F L LP P V + +L + T ++ + + + PK
Sbjct: 811 FW--DLSLPIPARSGTVKLSQCLEHFTREEVLDGDEKPTCSKCQMRRKCTKSFSIQKFPK 868
Query: 412 YMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHD 471
+++H++RF+ F K +V+FP+ L+L + P Y+L H
Sbjct: 869 ILVIHLKRFSPMERFRSKLNVMVDFPLTGLDLSAFAAPRVPG------CTYNLYGVANHS 922
Query: 472 GKPEGGFYRVFVQRKSEELW 491
G G Y + + W
Sbjct: 923 GTTHSGHYTAYCKHPYSGEW 942
>gi|157108246|ref|XP_001650143.1| hypothetical protein AaeL_AAEL004980 [Aedes aegypti]
gi|108879378|gb|EAT43603.1| AAEL004980-PA [Aedes aegypti]
Length = 626
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 130/331 (39%), Gaps = 51/331 (15%)
Query: 190 RHVGLNNIKETDFVNVTIQSLMRVTPLRNFF-LIP--ENYRHCKSPLVHR-----FGDL- 240
R VGL N+ T F+N +QSL + +F +P E +H R D+
Sbjct: 227 RVVGLRNLGNTCFMNSVLQSLSNIQEFSGYFNTMPSLETGKHKHKAYQSRSMKENLDDVF 286
Query: 241 ----TRKIW-----HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH 291
RK+ KG +SP E L V+ +FR Q + EF+ ++L+ LH
Sbjct: 287 VVEELRKVLLNLSQGGDGSKGAISP-ECLFLVIWKVVPQFRGHRQHDAHEFLRYMLDRLH 345
Query: 292 SDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSD-------GGDDHDNIT 344
++L+ I Q E K P N I KG + GG +
Sbjct: 346 TELQQVSFPVEISSPSAQKASET-KSNPYN-IPALSHLQSKGRNSIVTNVFGGILQSEVR 403
Query: 345 TETSRM------PFLMLGLDLPPPPLFKD---VMEKNIIPQVPLFNI---LKKFDGET-- 390
M PFL L LD+P KD EK+ P+ NI L F
Sbjct: 404 CLICGMESKKHDPFLDLSLDIPEKFYNKDPPESGEKDKEGNPPVCNISDCLASFTEVEEL 463
Query: 391 -------VTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLEL 443
+ + R+ + RLP + LH++RF NNF+ K ++FP+ L++
Sbjct: 464 TETELYYCSSCKCKQKSTKRFWIRRLPNVLCLHIKRFRWNNFYRTKIDLRISFPINALDM 523
Query: 444 KDYI--PLPTPKENEKLRSKYDLIANIVHDG 472
++ P + + + YDL A IVH G
Sbjct: 524 SQFVLNNGPETRRSNSSCNIYDLAAVIVHHG 554
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 134 YACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLP-DGYEINDP---SLEDI 189
+ CL CG GR + HA HS + H++ IN VYC D + +ND +LE+I
Sbjct: 63 WMCLQCGSVRCGRYESGHALKHSAKQNHNICINTVNLSVYCYKCDEFVVNDTPENTLEEI 122
Query: 190 RH 191
R
Sbjct: 123 RQ 124
>gi|297834320|ref|XP_002885042.1| ubiquitin-specific protease 25 [Arabidopsis lyrata subsp. lyrata]
gi|297330882|gb|EFH61301.1| ubiquitin-specific protease 25 [Arabidopsis lyrata subsp. lyrata]
Length = 662
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 132/301 (43%), Gaps = 32/301 (10%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHR------FGDLTRKIW 245
+GL N+ T ++N +Q L PL NF L ++ HC S + F + ++I
Sbjct: 24 LGLRNLGNTCYLNSVLQCLTFTPPLANFCLTHKHSSHCDSYVDGERKRDCPFCIVEKRIA 83
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIY 305
+ + + + +K + F++G Q + EF+ ++++ H+ KK
Sbjct: 84 RSLSVDLTTDAPNKISSCLKIFAEHFKLGRQEDAHEFLRYVIDACHNTSLRLKKLRIKGN 143
Query: 306 ECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLM-LGLDLPPPPL 364
E F G VVKEI G Q+ K G E+++ +M + L++
Sbjct: 144 EPFNGN-TVVKEI----FGGALQSQVKCLSCG-------AESNKADEIMDISLEILHSSS 191
Query: 365 FKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNN 424
K+ M+K Q + + K+ ET ++V AR + + + P +++ ++RF
Sbjct: 192 VKESMQKFF--QSEILDGNNKYKCETCEKLV---TARKQMSILQAPNILVIQLKRF--GG 244
Query: 425 FFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG-KPEGGFYRVFV 483
F K ++F + L L +++ K ++ + +Y L IVH G PE G Y +V
Sbjct: 245 IFGGKIDKAISFG-EILVLSNFM----SKASKDPQPEYKLFGIIVHSGFSPESGHYYAYV 299
Query: 484 Q 484
+
Sbjct: 300 K 300
>gi|410896095|ref|XP_003961535.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Takifugu
rubripes]
Length = 1162
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 120/311 (38%), Gaps = 49/311 (15%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
GL N+ T F+N +Q L P N+ L E+ + C P + I
Sbjct: 83 AGLQNMGNTCFLNSALQCLTYTAPFSNYMLTREHSKTCHEPGFCMMCTMQNHIIQVFANS 142
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-SDLRNTK-----KNTSIIY 305
G V + +K K FR G Q + EF+ + ++ + S L TK + T+ I+
Sbjct: 143 GNVIKPIGVLNELKRIAKHFRYGSQEDAHEFLRYTVDAMQKSCLPGTKLDRQTQATTFIH 202
Query: 306 ECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPL 364
+ F G L VK + N + SD D PFL + L++ P
Sbjct: 203 QVFGGYLRSRVKCL----------NCKAVSDTFD------------PFLDIPLEIKTAPS 240
Query: 365 FKDVMEKNIIPQVPLFNILKKFDGETV---TEVVRPHVARMRYRVTRLPKYMILHMRRFT 421
+E+ + P+ + DGE T+ + A R+ + R + L ++RF
Sbjct: 241 VSKALEQFVKPE--------QLDGENAYKCTKCKKMVTASKRFTIHRSANVLTLALKRFA 292
Query: 422 KNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG-KPEGGFYR 480
NF K V +P E D P + + E Y L A +VH G G Y
Sbjct: 293 --NFSGGKITKDVKYP----EYLDLRPFMSQSQGEP--QVYGLYAVLVHSGFSCHAGHYF 344
Query: 481 VFVQRKSEELW 491
+++ + + +
Sbjct: 345 CYIKASNGQWY 355
>gi|322801296|gb|EFZ21983.1| hypothetical protein SINV_10772 [Solenopsis invicta]
Length = 886
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 119/320 (37%), Gaps = 37/320 (11%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRKIW 245
GL NI T F+N IQ L PL + L I K L+ F + ++W
Sbjct: 548 GLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQYLADINTTTSSMKGALIKAFSQVIHELW 607
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSI- 303
V L++ ++ RF Q + EF+ +LL LH D+ R T K I
Sbjct: 608 EVGG--DHVVNTTALKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTTKLPPIH 665
Query: 304 -----IYECFQGELEVVKEIPKNTIS-------GNDQNTEKGSDGGDDHDNITTETSRMP 351
Y Q +E K ++ S G +++ + + DH ++T + P
Sbjct: 666 GDIPDSYTDMQKAVESWKRYLRSEDSTIVDVFVGQLRSSLRCTSC--DHVSVTLD----P 719
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPK 411
F L LP P V + +L + T ++ + + + PK
Sbjct: 720 FW--DLSLPIPARSGTVKLSQCLEHFTREEVLDGDEKPTCSKCQMRRKCTKSFSIQKFPK 777
Query: 412 YMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHD 471
+++H++RF+ F K +V+FP+ L+L + P Y+L H
Sbjct: 778 ILVIHLKRFSPMERFRGKLNVMVDFPLTGLDLSAFAAPRVPG------CTYNLYGVANHS 831
Query: 472 GKPEGGFYRVFVQRKSEELW 491
G G Y + + W
Sbjct: 832 GTTYSGHYTAYCKHPYSGEW 851
>gi|432911380|ref|XP_004078651.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like [Oryzias
latipes]
Length = 911
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 96/255 (37%), Gaps = 67/255 (26%)
Query: 104 DCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLVCGKYYQGRGQK--SHAYTH 155
DCP+L V + +K C+V NL +ACL G Y G G+ H+ H
Sbjct: 9 DCPHLACVGEITKEELIQKSHGHCRDCNVKGPNL--WACLESGCAYVGCGESHTDHSTVH 66
Query: 156 SLEAGHHVYINLRTEKVYC------------------------LPDGYEIND-------- 183
S E+ H++ +NL T +V+C LP + D
Sbjct: 67 SQESRHNLTVNLTTLRVWCYSCSKEVFLERKLGPHSPHVSFKPLPPPQNVQDAMRDSGSP 126
Query: 184 -----PS---LEDIRH-------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI 222
PS ED+ GL NI T ++N +Q+L PL FFL
Sbjct: 127 TPLRVPSSGGCEDLDMDTEEEDDMRVRGLSGLKNIGNTCYMNAALQALSNCPPLTQFFLE 186
Query: 223 PENYRHC--KSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPV 280
K L + L +WH +N V P Q + KA FR Q +
Sbjct: 187 CGGLVKTDKKPALCKSYQKLVSDLWH-KNRPSYVVPTTLFQGI-KAINPMFRGYSQQDSQ 244
Query: 281 EFMSWLLNTLHSDLR 295
EF+ L++ LH +L+
Sbjct: 245 EFLRCLMDQLHEELK 259
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
++ +LP+ + +H++RF F K T V+FP++ L+L+ ++ K++ + YDL
Sbjct: 573 KMQKLPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFL----SKDSSAQTTNYDL 628
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + S LW
Sbjct: 629 LSVICHHGTASSGHYIAYCRNDSNNLW 655
>gi|350424674|ref|XP_003493875.1| PREDICTED: hypothetical protein LOC100741560 [Bombus impatiens]
Length = 979
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 120/320 (37%), Gaps = 37/320 (11%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRKIW 245
GL NI T F+N IQ L PL + L I + K L+ F + ++W
Sbjct: 641 GLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQYLADINTSTSSMKGALIKAFSQVIHELW 700
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSI- 303
V L++ ++ RF Q + EF+ +LL LH D+ R T K I
Sbjct: 701 EVGG--DLVVNTTALKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTVKPQPIH 758
Query: 304 -----IYECFQGELEVVKEIPKNTIS-------GNDQNTEKGSDGGDDHDNITTETSRMP 351
+Y Q +E K ++ S G +++ + DH ++T + P
Sbjct: 759 TDIPEMYTDSQKAVESWKRYLRSEDSMIVDVFVGQLRSSLHCTSC--DHVSVTLD----P 812
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPK 411
F L LP P V + +L + T ++ + + + PK
Sbjct: 813 FW--DLSLPIPARSGTVKLSQCLEHFTREEVLDGDEKPTCSKCQMRRKCTKSFSIQKFPK 870
Query: 412 YMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHD 471
+++H++RF+ F K +V+FP+ L+L + P Y+L H
Sbjct: 871 ILVIHLKRFSPMERFRSKLNVMVDFPLTGLDLSAFAAPRVPG------CTYNLYGVANHS 924
Query: 472 GKPEGGFYRVFVQRKSEELW 491
G G Y + + W
Sbjct: 925 GTTHSGHYTAYCKHPYSGEW 944
>gi|119472760|ref|XP_001258413.1| ubiquitin C-terminal hydrolase Ubp8, putative [Neosartorya fischeri
NRRL 181]
gi|119406565|gb|EAW16516.1| ubiquitin C-terminal hydrolase Ubp8, putative [Neosartorya fischeri
NRRL 181]
Length = 499
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/402 (19%), Positives = 152/402 (37%), Gaps = 71/402 (17%)
Query: 134 YACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV- 192
Y CL C + + H+ E GH Y+ R ++C G + D LE +R +
Sbjct: 79 YTCLTCSEVCAPADRP----VHTKETGHQFYMESRGRTLFCQGCGDFVYDHDLERLRSLP 134
Query: 193 --------------------------------------GLNNIKETDFVNVTIQSLMRVT 214
GL N+ +T ++NV +Q+L+
Sbjct: 135 YGMHQAASRRRRSSESSSDEQFVRNNANKRACAKKGVRGLYNLGQTCYLNVILQTLLH-D 193
Query: 215 PLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG 274
P+ N + + ++ L G + + N + L ++ + + +
Sbjct: 194 PILNAYFLGNGHQSHDCTLQDCIGCAVAEAFADFNSSDKAEGFAALNLLLASWRASPTLA 253
Query: 275 V--QSNPVEFMSWLLNTLHSDLR-----NTKKNTSIIYECFQGELEVVKEIPKNTISGND 327
Q + E+ +L++ LH+ + + + ++ F G+L+ + + N
Sbjct: 254 GYHQQDAHEYYQFLVDKLHTSTEGHVDDHDQGCSCFFHQTFYGKLK------SSVMCDNC 307
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD 387
N K D D ++ + G+ P +E P+ + + +
Sbjct: 308 GNITKTEDPMLDLSLDVQVQAKKRAMGGGVGPSATPTLNGCLESFTSPERLMAGVYNCSE 367
Query: 388 -GETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDY 446
G T P A R R+ +LP + + ++RF ++ EK V+FP+ +
Sbjct: 368 CGGT------PQKATKRLRIKKLPAILCMQLKRFEHSSAVSEKVEGRVDFPLS----INM 417
Query: 447 IPLPTPKENEKL-RSK--YDLIANIVHDGKPEGGFYRVFVQR 485
+P T + +E L +SK YDL + +VH GK + G Y V+ ++
Sbjct: 418 LPYTTHRHSEDLDKSKFVYDLSSAVVHKGKLDAGHYYVYCKQ 459
>gi|62027426|gb|AAH92078.1| Usp8 protein, partial [Mus musculus]
Length = 419
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 148/384 (38%), Gaps = 105/384 (27%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI+ S IR++ GL N+ T ++N +Q L
Sbjct: 43 RENKPPCYPKA-EISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 101
Query: 216 LRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ---VSPHEFLQAVM 264
L ++F + N K + FG + + +W GQ +SP +F +
Sbjct: 102 LADYFNRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDFKVTIG 156
Query: 265 KASKKRFRIGVQSNPVEFMSWLLNTLHSDL----------------------------RN 296
K + + F Q + E + +L++ LH DL ++
Sbjct: 157 KINDQ-FAGSSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNEHLDDLQAAEHAWQKH 215
Query: 297 TKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLG 356
+ N SII FQG+ K+T+ SR +
Sbjct: 216 KQLNESIIVALFQGQF-------KSTVQCL----------------TCRRRSRTFEAFMY 252
Query: 357 LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR--------VT 407
L LP K ++ + L+ F E +T+ R + + R R +
Sbjct: 253 LSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIW 302
Query: 408 RLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIAN 467
+LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK + K KY+L +
Sbjct: 303 KLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNSLK---KYNLFSV 357
Query: 468 IVHDGKPEGGFYRVFVQRKSEELW 491
H G +GG Y + + + + W
Sbjct: 358 SNHYGGLDGGHYTAYCKNAARQRW 381
>gi|224114846|ref|XP_002316872.1| predicted protein [Populus trichocarpa]
gi|222859937|gb|EEE97484.1| predicted protein [Populus trichocarpa]
Length = 657
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 131/302 (43%), Gaps = 32/302 (10%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHR------FGDLTRKIW 245
+GL N+ + ++N +Q L PL NF L ++ C S F L ++I
Sbjct: 28 LGLKNLGNSCYLNSVLQCLTYTPPLANFCLRLQHSSLCDSVANGDRKRDCPFCILEKRIV 87
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-SDLRNTKKNTSII 304
+ + + +Q+ +K + FR G Q + EF+ ++++ H + LR K I
Sbjct: 88 RSLSLDLTLDAPAKIQSCLKIFAEHFRCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGI 147
Query: 305 YECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLM-LGLDLPPPP 363
G + VVKEI G Q+ K E++++ +M + LD+
Sbjct: 148 ENGGGGGVSVVKEI----FGGALQSQVKCL-------CCNYESNKVDEIMDISLDVLNSY 196
Query: 364 LFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKN 423
+D M+K P+V N K+ E ++V AR + + + P +++ ++RF
Sbjct: 197 SVRDAMQKFFQPEVLDGN--NKYKCEKCQKLV---AARKQMSILQAPNVLVIQLKRF--E 249
Query: 424 NFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG-KPEGGFYRVF 482
F K + F + L L ++ K ++ + +Y+L IVH G PE G Y +
Sbjct: 250 GIFGAKIDKAIAFE-EVLVLSSFM----SKTSQDPQPEYNLFGTIVHSGYSPESGHYYAY 304
Query: 483 VQ 484
++
Sbjct: 305 IK 306
>gi|380020720|ref|XP_003694227.1| PREDICTED: uncharacterized protein LOC100870505 [Apis florea]
Length = 1055
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 119/320 (37%), Gaps = 37/320 (11%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRKIW 245
GL NI T F+N IQ L PL + L I K L+ F + ++W
Sbjct: 717 GLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQYLADINTTTSSMKGALIKAFSQVIHELW 776
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSI- 303
V L++ ++ RF Q + EF+ +LL LH D+ R T K I
Sbjct: 777 EVGG--DLVVNTTALKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTVKPQPIH 834
Query: 304 -----IYECFQGELEVVKEIPKNTIS-------GNDQNTEKGSDGGDDHDNITTETSRMP 351
+Y Q +E K ++ S G +++ + DH ++T + P
Sbjct: 835 TDIPEMYTDSQKAVESWKRYLRSEDSMIVDVFVGQLRSSLHCTSC--DHVSVTLD----P 888
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPK 411
F L LP P V + +L + T ++ + + + PK
Sbjct: 889 FW--DLSLPIPARSGTVKLSQCLEHFTREEVLDGDEKPTCSKCQMRRKCTKSFSIQKFPK 946
Query: 412 YMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHD 471
+++H++RF+ F K +V+FP+ L+L + P Y+L H
Sbjct: 947 ILVIHLKRFSPMERFRSKLNVMVDFPLTGLDLSAFAAPRVPG------CTYNLYGVANHS 1000
Query: 472 GKPEGGFYRVFVQRKSEELW 491
G G Y + + W
Sbjct: 1001 GTTHSGHYTAYCKHPYSAEW 1020
>gi|321477460|gb|EFX88419.1| hypothetical protein DAPPUDRAFT_305599 [Daphnia pulex]
Length = 513
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 106/444 (23%), Positives = 159/444 (35%), Gaps = 119/444 (26%)
Query: 121 EKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYE 180
+ F +V L+ V C CG Y R ++ A H +A ++L +VY + E
Sbjct: 82 KHFLAVDLT-YGVVCCFQCGDYVYDRELETIAQKHQTKAS----LSLGLGQVYHSWEPSE 136
Query: 181 --------------INDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFL----- 221
I D + +R GL N+ T F+N +Q+L++V LR+FFL
Sbjct: 137 EEIELLKKHTRRKKITDSATIGLR--GLVNLGNTCFMNCIVQALLKVPLLRDFFLSDRHI 194
Query: 222 ------------------IPENYRHCKSPL-VHRFGDLTRKIW-HARNFKG--QVSPHEF 259
E Y K+PL +HR L IW HAR+ G Q HEF
Sbjct: 195 CQFQDEPSRCLVCEISRLFQEFYSGNKAPLTLHRLLHL---IWTHARHLAGYEQQDAHEF 251
Query: 260 LQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIP 319
A + + R P E S + + T II + F G L+ ++
Sbjct: 252 FIATLDVLHRHCR-----GPNEQQS-----TQPQENSVNRCTCIIDQIFTGGLQ--SDVV 299
Query: 320 KNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVP- 378
G T+ PF + LDL P P K V N +P
Sbjct: 300 CQACHG-------------------VSTTVDPFWDISLDLGPSPSTKVVTTGNGPGSIPT 340
Query: 379 -LFNILKKFD-GETVTEVVRPHVARM--------RYRVTRLPKYMILHMRRFTKNNFFVE 428
L + L++F E + + +R + + +LP H++RF +N F +
Sbjct: 341 SLQDCLERFTRAEHLGSSAKIKCSRCLSYQESTKQLTMKKLPVVASFHLKRFEHSNRFHK 400
Query: 429 KNPTLVNFPVKNLELKDYIPL---------------------PTPKENEKLRSKYDLIAN 467
K + + FP E D P P K + Y L A
Sbjct: 401 KISSFIAFP----EYLDMSPFMSHRRNINNNVNSDSPDRSDRPVHKPLISTENMYSLFAV 456
Query: 468 IVHDGKPEGGFYRVFVQRKSEELW 491
I H G E G Y ++ R+ + W
Sbjct: 457 INHVGTIEAGHYTAYI-RQHRDHW 479
>gi|326925187|ref|XP_003208801.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like [Meleagris
gallopavo]
Length = 910
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 102/259 (39%), Gaps = 65/259 (25%)
Query: 98 LVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLVCGKYYQGRGQK-- 149
+ + +CP+L++V + +K C V NL +ACL Y G G+
Sbjct: 1 MASLSSNCPHLESVGEITKEELIQKSHGTCQDCKVRGPNL--WACLENRCTYVGCGESHV 58
Query: 150 SHAYTHSLEAGHHVYINLRTEKVYC------------------LPDG------------- 178
H+ THS E H + +NL T +V+C LP+
Sbjct: 59 DHSTTHSQETKHCLTVNLTTLRVWCYACSKEVFLDRKLGCHSPLPNARLTQTLENSVQDF 118
Query: 179 --------------------YEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRN 218
E+ + L+ GL NI T ++N +Q+L PL +
Sbjct: 119 KIPSVPTLKIPLSAVFDDLDIEVEEDELKTRGLTGLKNIGNTCYMNAALQALSNCPPLTH 178
Query: 219 FFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQ 276
FFL R K P + + + L ++WH +N G V P Q + K+ FR Q
Sbjct: 179 FFLDCGGLARTDKKPAICKSYLKLMTELWH-KNRPGSVVPTGLFQGI-KSVNPTFRGYSQ 236
Query: 277 SNPVEFMSWLLNTLHSDLR 295
+ EF+ L++ LH +L+
Sbjct: 237 QDAQEFLRCLMDLLHEELK 255
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 572 KVQKFPEILCIHLKRFRHELMFSTKIGTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 627
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 628 LSVICHHGTASSGHYIAYCRNNLNNLW 654
>gi|47226066|emb|CAG04440.1| unnamed protein product [Tetraodon nigroviridis]
Length = 535
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 120/310 (38%), Gaps = 49/310 (15%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKG 252
GL N+ T F+N +Q L P N+ L E+ + C P + I G
Sbjct: 30 GLQNMGNTCFLNSALQCLTYTAPFANYMLTREHSKTCHEPGFCMMCTMQNHIIQVFANTG 89
Query: 253 QVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-SDLRNTK-----KNTSIIYE 306
V + +K K FR G Q + EF+ + ++ + S L TK + T+ I++
Sbjct: 90 NVIKPIGVLNELKRIAKHFRYGSQEDAHEFLRYTVDAMQKSCLPGTKLDRQTQATTFIHQ 149
Query: 307 CFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLF 365
F G L VK + N + SD D PFL + L++ P
Sbjct: 150 VFGGYLRSRVKCL----------NCKAVSDTFD------------PFLDIPLEIKTAPSV 187
Query: 366 KDVMEKNIIPQVPLFNILKKFDGETV---TEVVRPHVARMRYRVTRLPKYMILHMRRFTK 422
+E+ + P+ + DGE T+ + A R+ + R + L ++RF
Sbjct: 188 SKALEQFVKPE--------QLDGENAYKCTKCKKMVTASKRFTIHRSANVLTLALKRFA- 238
Query: 423 NNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG-KPEGGFYRV 481
NF K V +P E D P + + E Y L A +VH G G Y
Sbjct: 239 -NFSGGKITKDVKYP----EYLDLRPFMSQSQGEP--QVYGLYAVLVHSGFSCHAGHYFC 291
Query: 482 FVQRKSEELW 491
+++ + + +
Sbjct: 292 YIKASNGQWY 301
>gi|145491367|ref|XP_001431683.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124398788|emb|CAK64285.1| unnamed protein product [Paramecium tetraurelia]
Length = 451
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 143/331 (43%), Gaps = 45/331 (13%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHC----KSPLVHR------FGDLT 241
VGL N+ ++N +IQ L + PL ++F+ E+++ K+P+ + F +L
Sbjct: 85 VGLKNLGNKCYMNASIQLLSNLQPLSDYFI--EDFQLTEINRKNPISTQGLATVAFANLI 142
Query: 242 RKIWHA----RNFKGQ--VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL- 294
+ +W KG + P EF ++ K F Q + EF+ +LL+ +H DL
Sbjct: 143 KSLWQMDIQKLTVKGTPIIIPEEF-NKIIGYCNKSFSDNTQQDAQEFLMYLLDMIHEDLN 201
Query: 295 RNTKKNTSIIY-----ECFQGELEVVK--------EIPKNTISGNDQNTEKGSDGGDDHD 341
R T S+ +C Q ELE + K+ I Q K S D
Sbjct: 202 RVTFPIKSVQLREYSGDCNQRELEKQAAETWGDYLQRSKSIIVDLMQGQFKNSLKCLSCD 261
Query: 342 NITTETSRMPFLMLGLDLPPPPLFKDV-MEKNIIPQVPLFNILKKFDGETVTEVVRPHVA 400
N T + P + L + +P + + K + + L N + F E ++V A
Sbjct: 262 NYTYKFE--PLMYLSVPIPESEECQLIECIKEYVKEEQLTNGNQWF-CENCHKLVD---A 315
Query: 401 RMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRS 460
+ + +LP +I+H++RF ++K +NFP+++L L +P + +K +
Sbjct: 316 IKKIDLWKLPTILIIHLKRFKFIENGIKKIEQAINFPMESLNLSQCLP-----KLQKEKP 370
Query: 461 KYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+L+ I H G + G Y + + K W
Sbjct: 371 IYELLGVICHTGTSDRGHYYTYARSKENFNW 401
>gi|345801778|ref|XP_537108.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 1
[Canis lupus familiaris]
Length = 907
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 95/252 (37%), Gaps = 62/252 (24%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQKSHAY 153
R CP+LD+V + +K C V NL +ACL C G Q H+
Sbjct: 5 RNHCPHLDSVGEITKEDLIQKSHGTCQDCKVRGPNL--WACLENRCSYVGCGESQVDHST 62
Query: 154 THSLEAGHHVYINLRTEKVYC--------------------------------LPDGYEI 181
HS E H++ +NL T +V+C +P +
Sbjct: 63 IHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPPLPHSAVFSVIKDFKIPSNTTL 122
Query: 182 NDP----------------SLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPEN 225
P L+ GL NI T ++N +Q+L PL FFL
Sbjct: 123 KTPLVAVFDDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGG 182
Query: 226 Y-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFM 283
R K P + + + L ++WH ++ G V P Q + K FR Q + EF+
Sbjct: 183 LARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTTLFQGI-KTVNPTFRGYSQQDAQEFL 240
Query: 284 SWLLNTLHSDLR 295
L++ LH +L+
Sbjct: 241 RCLMDLLHEELK 252
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 569 KVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 624
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 625 LSVICHHGTASSGHYIAYCRNNLNNLW 651
>gi|93279989|pdb|2GFO|A Chain A, Structure Of The Catalytic Domain Of Human Ubiquitin
Carboxyl-terminal Hydrolase 8
Length = 396
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 144/384 (37%), Gaps = 105/384 (27%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI+ S IR++ GL N+ T + N +Q L
Sbjct: 28 RENKPTCYPKA-EISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYXNSILQCLCNAPH 86
Query: 216 LRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ---VSPHEFLQAVM 264
L ++F + N K + FG + + +W GQ +SP +F +
Sbjct: 87 LADYFNRNCYQDDINRSNLLGHKGEVAEEFGIIXKALW-----TGQYRYISPKDFKITIG 141
Query: 265 KASKKRFRIGVQSNPVEFMSWLLNTLHSDL----------------------------RN 296
K + + F Q + E + +L + LH DL ++
Sbjct: 142 KINDQ-FAGYSQQDSQELLLFLXDGLHEDLNKADNRKRYKEENNDHLDDFKAAEHAWQKH 200
Query: 297 TKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLG 356
+ N SII FQG+ + + + SR
Sbjct: 201 KQLNESIIVALFQGQFKSTVQCL-----------------------TCHKKSRTFEAFXY 237
Query: 357 LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR--------VT 407
L LP K ++ + L+ F E +T+ R + + R R +
Sbjct: 238 LSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIW 287
Query: 408 RLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIAN 467
+LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK N K KY+L +
Sbjct: 288 KLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNNLK---KYNLFSV 342
Query: 468 IVHDGKPEGGFYRVFVQRKSEELW 491
H G +GG Y + + + + W
Sbjct: 343 SNHYGGLDGGHYTAYCKNAARQRW 366
>gi|374073975|pdb|2Y5B|A Chain A, Structure Of Usp21 In Complex With Linear
Diubiquitin-Aldehyde
gi|374073977|pdb|2Y5B|E Chain E, Structure Of Usp21 In Complex With Linear
Diubiquitin-Aldehyde
Length = 370
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 125/339 (36%), Gaps = 70/339 (20%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 16 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 73
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 74 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 131
Query: 303 IIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNIT------TETSRMPFLMLG 356
I+ +P G E+ DD N+ E S++ L +G
Sbjct: 132 ILAN---------GPVPSPPRRGGAL-LEEPELSDDDRANLMWKRYLEREDSKIVDLFVG 181
Query: 357 -----------------------LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE 393
L LP P K + FN+ K E +
Sbjct: 182 QLKSCLKCQACGYRSTTFEVFCDLSLPIP---KKGFAGGKVSLRDCFNLFTK--EEELES 236
Query: 394 VVRPHVARMRYR--------VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKD 445
P R R + V R P+ ++LH+ RF+ + ++K+ V+FP++ L L D
Sbjct: 237 ENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKKSSVGVDFPLQRLSLGD 296
Query: 446 YIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQ 484
+ ++ Y L A H G G Y +
Sbjct: 297 F------ASDKAGSPVYQLYALCNHSGSVHYGHYTALCR 329
>gi|297787764|pdb|3MTN|A Chain A, Usp21 In Complex With A Ubiquitin-based, Usp21-specific
Inhibitor
gi|297787766|pdb|3MTN|C Chain C, Usp21 In Complex With A Ubiquitin-based, Usp21-specific
Inhibitor
Length = 373
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 125/339 (36%), Gaps = 70/339 (20%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 22 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 79
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 80 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 137
Query: 303 IIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNIT------TETSRMPFLMLG 356
I+ +P G E+ DD N+ E S++ L +G
Sbjct: 138 ILAN---------GPVPSPPRRGGAL-LEEPELSDDDRANLMWKRYLEREDSKIVDLFVG 187
Query: 357 -----------------------LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE 393
L LP P K + FN+ K E +
Sbjct: 188 QLKSCLKCQACGYRSTTFEVFCDLSLPIP---KKGFAGGKVSLRDCFNLFTK--EEELES 242
Query: 394 VVRPHVARMRYR--------VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKD 445
P R R + V R P+ ++LH+ RF+ + ++K+ V+FP++ L L D
Sbjct: 243 ENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKKSSVGVDFPLQRLSLGD 302
Query: 446 YIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQ 484
+ ++ Y L A H G G Y +
Sbjct: 303 F------ASDKAGSPVYQLYALCNHSGSVHYGHYTALCR 335
>gi|431917785|gb|ELK17027.1| Ubiquitin carboxyl-terminal hydrolase 11 [Pteropus alecto]
Length = 881
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 9/158 (5%)
Query: 334 SDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE 393
S+G D N +T P++ +D P M+K +V +K
Sbjct: 671 SNGTSDRSNFNEDTHAQPYI--AIDWEPE------MKKRYYDEVEAEGYVKHDCVGYCPS 722
Query: 394 VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPK 453
+ +A + + +LP+ +I+H++RF+ F EK TLV FP+++L+ +++ P +
Sbjct: 723 CKQHQLATKKLDLWKLPETLIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVIKPQNE 782
Query: 454 ENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+L KYDLIA H G G Y F K W
Sbjct: 783 SAPELY-KYDLIAVSNHYGGLRDGHYTTFACNKDSGQW 819
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 15/118 (12%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL---IPENYRHC-----KSPLVHRFGDLTRK 243
GL N+ T F+N +Q L V L +FL E C K + + DL ++
Sbjct: 255 CGLTNLGNTCFMNSALQCLSNVPQLTEYFLKNRYLEELNFCNPLGMKGEIAEAYADLVKQ 314
Query: 244 IW--HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK 299
W H R+ QV + + +F Q + E +S+LL+ LH DL KK
Sbjct: 315 AWSGHHRSIVPQV-----FKTKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKK 367
>gi|254575047|pdb|3I3T|A Chain A, Crystal Structure Of Covalent Ubiquitin-usp21 Complex
gi|254575048|pdb|3I3T|C Chain C, Crystal Structure Of Covalent Ubiquitin-usp21 Complex
gi|254575049|pdb|3I3T|E Chain E, Crystal Structure Of Covalent Ubiquitin-usp21 Complex
gi|254575050|pdb|3I3T|G Chain G, Crystal Structure Of Covalent Ubiquitin-usp21 Complex
Length = 355
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 125/339 (36%), Gaps = 70/339 (20%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 3 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 60
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 61 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 118
Query: 303 IIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNIT------TETSRMPFLMLG 356
I+ +P G E+ DD N+ E S++ L +G
Sbjct: 119 ILAN---------GPVPSPPRRGGAL-LEEPELSDDDRANLMWKRYLEREDSKIVDLFVG 168
Query: 357 -----------------------LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE 393
L LP P K + FN+ K E +
Sbjct: 169 QLKSCLKCQACGYRSTTFEVFCDLSLPIP---KKGFAGGKVSLRDCFNLFTK--EEELES 223
Query: 394 VVRPHVARMRYR--------VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKD 445
P R R + V R P+ ++LH+ RF+ + ++K+ V+FP++ L L D
Sbjct: 224 ENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKKSSVGVDFPLQRLSLGD 283
Query: 446 YIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQ 484
+ ++ Y L A H G G Y +
Sbjct: 284 F------ASDKAGSPVYQLYALCNHSGSVHYGHYTALCR 316
>gi|146324510|ref|XP_751149.2| ubiquitin C-terminal hydrolase Ubp8 [Aspergillus fumigatus Af293]
gi|129557282|gb|EAL89111.2| ubiquitin C-terminal hydrolase Ubp8, putative [Aspergillus
fumigatus Af293]
gi|159124720|gb|EDP49838.1| ubiquitin C-terminal hydrolase Ubp8, putative [Aspergillus
fumigatus A1163]
Length = 499
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/402 (19%), Positives = 152/402 (37%), Gaps = 71/402 (17%)
Query: 134 YACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV- 192
Y CL C + + +H + E GH Y+ R ++C G + D LE +R +
Sbjct: 79 YTCLTCSEVCAPADRPAH----TKETGHQFYMESRGRILFCQGCGDFVYDHDLERLRSLP 134
Query: 193 --------------------------------------GLNNIKETDFVNVTIQSLMRVT 214
GL N+ +T ++NV +Q+L+
Sbjct: 135 YGMHQAASRRRRSSESSSDEQFVRNNANKRACAKQGVRGLYNLGQTCYLNVILQTLLH-D 193
Query: 215 PLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG 274
P+ N + + ++ L G + + N + L ++ + + +
Sbjct: 194 PILNAYFLGNGHQSHDCTLQDCIGCAVAEAFADFNSSDKAEGFAALNLLLASWRASPTLA 253
Query: 275 V--QSNPVEFMSWLLNTLHSDLR-----NTKKNTSIIYECFQGELEVVKEIPKNTISGND 327
Q + E+ +L++ LH+ + + + ++ F G+L+ + + N
Sbjct: 254 GYHQQDAHEYYQFLVDKLHTSTEGHVDDHDQGCSCFFHQTFYGKLK------SSVMCDNC 307
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD 387
N K D D ++ + G+ P +E P+ + + +
Sbjct: 308 GNITKTEDPMLDLSLDVQVQAKKRAMGGGVGPSATPTLNGCLESFTSPERLMAGVYNCSE 367
Query: 388 -GETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDY 446
G T P A R R+ +LP + + ++RF ++ EK V+FP+ +
Sbjct: 368 CGGT------PQKATKRLRIKKLPAILCMQLKRFEHSSAVSEKVEGRVDFPLS----INM 417
Query: 447 IPLPTPKENEKL-RSK--YDLIANIVHDGKPEGGFYRVFVQR 485
+P T + E L +SK YDL + +VH GK + G Y V+ ++
Sbjct: 418 LPYTTHRHREDLDKSKFVYDLSSAVVHKGKLDAGHYYVYCKQ 459
>gi|348586746|ref|XP_003479129.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like [Cavia
porcellus]
Length = 857
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 95/257 (36%), Gaps = 67/257 (26%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQKSHAY 153
R CP+LD+V + +K C V NL +ACL C G Q H+
Sbjct: 5 RNHCPHLDSVGEITKEDLIQKSHGTCQDCKVRGPNL--WACLENRCSYVGCGESQVDHST 62
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH--------------- 191
HS + H++ +NL T +V+C E+ SL +R
Sbjct: 63 IHSQDTKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQTSLPHVRQPQQIQENSVQDFKIP 122
Query: 192 -------------------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFF 220
GL NI T ++N +Q+L PL FF
Sbjct: 123 NNTTLKTPLVAVFDDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPLTQFF 182
Query: 221 LIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSN 278
L R K P + + + L ++WH ++ G V P Q + K FR Q +
Sbjct: 183 LDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTNLFQGI-KTVNPTFRGYSQQD 240
Query: 279 PVEFMSWLLNTLHSDLR 295
EF+ L++ LH +L+
Sbjct: 241 AQEFLRCLMDLLHEELK 257
>gi|365985319|ref|XP_003669492.1| hypothetical protein NDAI_0C05900 [Naumovozyma dairenensis CBS 421]
gi|343768260|emb|CCD24249.1| hypothetical protein NDAI_0C05900 [Naumovozyma dairenensis CBS 421]
Length = 826
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 136/352 (38%), Gaps = 51/352 (14%)
Query: 184 PSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLI--------PENYRHCKSPLVH 235
P L+ GL N+K + ++N IQ L+ L +L EN K L
Sbjct: 450 PKLDLDFTTGLENVKNSCYMNCVIQCLLSTHDLTKLYLTNAFLTQINVENKLGSKGFLSK 509
Query: 236 RFGDLTRKIW-------HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLN 288
F +L + ++ + NF V+P EF A + + + EF +LL+
Sbjct: 510 NFANLIQTMYKKSAFQPYNPNFLHPVAPLEFKNAC-GMMNSIYAESTEQDCQEFCEFLLD 568
Query: 289 TLHSDL---------RNTKKNTSIIYECFQGELEVVKEIPKNTISGND----QNTEKGSD 335
LH DL + N + + E + + EI + + N +G
Sbjct: 569 GLHEDLNQCSGNPRPKELSANEAELRESL--SMRIASEIEWESFLTTNFSPIINLFQGQY 626
Query: 336 GGDDHDNIT--TETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGET--- 390
I T T+ PF +L + +P +F + NI+ F ++ D +
Sbjct: 627 ASRLQCLICQHTSTTYQPFSLLSIPVPSM-VFSNGQTCNILDCFKEFTKCERLDNDEKWF 685
Query: 391 VTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFP----VKNLELKDY 446
+ R ++ + ++TRLPK +I+H +RF F+ KN V +P + +L + DY
Sbjct: 686 CPKCRRKQISTKQLKITRLPKNLIIHFKRFDN---FMNKNNIFVQYPYQLDLTSLWVNDY 742
Query: 447 ---IPL----PTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+P P P + KY L A H G G Y +V + W
Sbjct: 743 DGKLPPNFNEPPPSRGQTPPFKYKLNAVSCHSGNLGSGHYTAYVDKGLYRGW 794
>gi|395517798|ref|XP_003763060.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11-like, partial
[Sarcophilus harrisii]
Length = 265
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 396 RPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKEN 455
R +A + + LP+ +I+H++RF+ F EK TLV FP+++L+ ++I P E
Sbjct: 106 RHQLATKKLDLWSLPEALIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFIIKPR-TEA 164
Query: 456 EKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+ + KYDLIA H G G Y F + K W
Sbjct: 165 DPIPCKYDLIAVSNHYGGLRDGHYTTFARNKDSGQW 200
>gi|145537628|ref|XP_001454525.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422291|emb|CAK87128.1| unnamed protein product [Paramecium tetraurelia]
Length = 472
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 134/337 (39%), Gaps = 74/337 (21%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFF--------LIPENYRHCKSPLVHRFGDLTRK 243
+GL N+ T ++N IQ L PL +F L EN + + + + L
Sbjct: 52 IGLQNLGNTCYINAAIQCLSNTQPLTEYFQQNLHNHELNIENPLSSRGQITNAYARLICS 111
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT------ 297
+W +++ ++P E + ++++ F + Q + E +++LL+ LH DL
Sbjct: 112 LW-KESYQKSINPIELI-SMIQLWNPFFVMNSQQDSHELLAFLLDMLHEDLNRVKHKPYI 169
Query: 298 ----------------------KKNTSIIYECFQGE-LEVVKEIPKNTISGNDQNTEKGS 334
K+N SII + FQG+ + +++ + NT S +
Sbjct: 170 EEKTYDQQPNQQQANKAWSDYLKRNRSIIVDLFQGQSINMLQCMVCNTKSYKFET----- 224
Query: 335 DGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEV 394
F+ L L P+ +D I + L + + ++
Sbjct: 225 -----------------FMYLSL-----PIQQDADLIQCISEYLREEELDEANQWHCSKC 262
Query: 395 VRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKE 454
++ ++ +LP +++H++RF + K L+NFP+ NL+L +Y
Sbjct: 263 KSVKKSKKGIKLWKLPNILVIHLKRFKFTANYRCKLRWLINFPMYNLDLSNY-------- 314
Query: 455 NEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+E+ ++ YDL I H G G Y + K + W
Sbjct: 315 SEQEQATYDLYGVINHSGTLHSGHYTSNCKNKDTQKW 351
>gi|20071587|gb|AAH27052.1| Usp8 protein, partial [Mus musculus]
Length = 673
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 148/384 (38%), Gaps = 105/384 (27%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI+ S IR++ GL N+ T ++N +Q L
Sbjct: 297 RENKPPCYPKA-EISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 355
Query: 216 LRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ---VSPHEFLQAVM 264
L ++F + N K + FG + + +W GQ +SP +F +
Sbjct: 356 LADYFNRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDFKVTIG 410
Query: 265 KASKKRFRIGVQSNPVEFMSWLLNTLHSDL----------------------------RN 296
K + + F Q + E + +L++ LH DL ++
Sbjct: 411 KINDQ-FAGSSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNEHLDDLQAAEHAWQKH 469
Query: 297 TKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLG 356
+ N SII FQG+ K+T+ SR +
Sbjct: 470 KQLNESIIVALFQGQF-------KSTVQCL----------------TCRRRSRTFEAFMY 506
Query: 357 LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR--------VT 407
L LP K ++ + L+ F E +T+ R + + R R +
Sbjct: 507 LSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIW 556
Query: 408 RLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIAN 467
+LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK + K KY+L +
Sbjct: 557 KLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNSLK---KYNLFSV 611
Query: 468 IVHDGKPEGGFYRVFVQRKSEELW 491
H G +GG Y + + + + W
Sbjct: 612 SNHYGGLDGGHYTAYCKNAARQRW 635
>gi|213624427|gb|AAI71081.1| hypothetical protein LOC548982 [Xenopus (Silurana) tropicalis]
Length = 892
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 95/249 (38%), Gaps = 61/249 (24%)
Query: 104 DCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLVCGKYYQGRGQK--SHAYTH 155
DCP+L++V + +K C V NL +ACL G Y G G+ H+ H
Sbjct: 7 DCPHLESVGEVTKEELIKKSHGSCQDCRVRGPNL--WACLENGCSYVGCGESHVDHSTLH 64
Query: 156 SLEAGHHVYINLRTEKVYCL---------------PDGYEINDPSLEDIRH--------- 191
S + H + +NL T +V+C P ++ D ++ +
Sbjct: 65 SQDTKHCLTVNLTTLRVWCYTCSKEVFLDRKLSTQPTSAKLQDSHTQESKMSSSLTLKIP 124
Query: 192 -----------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRH 228
GL NI T ++N +Q+L PL ++FL
Sbjct: 125 AAVVSENLDIELEEEDELKTRGLTGLKNIGNTCYMNAALQALSNCPPLTHYFLDCGGLAR 184
Query: 229 C--KSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWL 286
K L + L IWH +N G V P Q + K+ FR Q + EF+ L
Sbjct: 185 TDKKPALCKSYQKLMSDIWH-KNRPGFVIPTNLFQGI-KSVNPTFRGYSQQDAQEFLRCL 242
Query: 287 LNTLHSDLR 295
++ LH +L+
Sbjct: 243 MDVLHEELK 251
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 554 KVQKFPEILCIHLKRFRHELMFSTKIGTHVSFPLEGLDLQPFLAKDSPSQ----IVTYDL 609
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 610 LSVICHHGTASSGHYIAYCRNNLNNLW 636
>gi|62859025|ref|NP_001016228.1| ubiquitin carboxyl-terminal hydrolase 33 [Xenopus (Silurana)
tropicalis]
gi|123892401|sp|Q28CN3.1|UBP33_XENTR RecName: Full=Ubiquitin carboxyl-terminal hydrolase 33; AltName:
Full=Deubiquitinating enzyme 33; AltName: Full=Ubiquitin
thioesterase 33; AltName:
Full=Ubiquitin-specific-processing protease 33
gi|89268163|emb|CAJ82183.1| ubiquitin specific protease 33 [Xenopus (Silurana) tropicalis]
Length = 892
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 95/249 (38%), Gaps = 61/249 (24%)
Query: 104 DCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLVCGKYYQGRGQK--SHAYTH 155
DCP+L++V + +K C V NL +ACL G Y G G+ H+ H
Sbjct: 7 DCPHLESVGEVTKEELIKKSHGSCQDCRVRGPNL--WACLENGCSYVGCGESHVDHSTLH 64
Query: 156 SLEAGHHVYINLRTEKVYCL---------------PDGYEINDPSLEDIRH--------- 191
S + H + +NL T +V+C P ++ D ++ +
Sbjct: 65 SQDTKHCLTVNLTTLRVWCYTCSKEVFLDRKLSTQPTSAKLQDSHTQESKMSSSLTLKIP 124
Query: 192 -----------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRH 228
GL NI T ++N +Q+L PL ++FL
Sbjct: 125 AAVVSENLDIELEEEDELKTRGLTGLKNIGNTCYMNAALQALSNCPPLTHYFLDCGGLAR 184
Query: 229 C--KSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWL 286
K L + L IWH +N G V P Q + K+ FR Q + EF+ L
Sbjct: 185 TDKKPALCKSYQKLMSDIWH-KNRPGFVIPTNLFQGI-KSVNPTFRGYSQQDAQEFLRCL 242
Query: 287 LNTLHSDLR 295
++ LH +L+
Sbjct: 243 MDVLHEELK 251
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 554 KVQKFPEILCIHLKRFRHELMFSTKIGTHVSFPLEGLDLQPFLAKDSPSQ----IVTYDL 609
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 610 LSVICHHGTASSGHYIAYCRNNLNNLW 636
>gi|307211269|gb|EFN87455.1| Ubiquitin carboxyl-terminal hydrolase 2 [Harpegnathos saltator]
Length = 342
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 116/320 (36%), Gaps = 37/320 (11%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRKIW 245
GL NI T F+N IQ L PL + L I K L+ F + ++W
Sbjct: 4 GLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQYLADINTTTSSMKGALIKAFSQVIHELW 63
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKK----- 299
V L++ ++ RF Q + EF+ +LL LH D+ R T K
Sbjct: 64 EVGG--DHVVNTTSLKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTTKLPPIH 121
Query: 300 --------NTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMP 351
T E ++ L + + G +++ + DH ++T + P
Sbjct: 122 GDIPDSYTETQKAVESWKRYLRSEDSMVVDVFVGQLRSSLHCTSC--DHVSVTLD----P 175
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPK 411
F L LP P V + +L + T ++ + + + PK
Sbjct: 176 FW--DLSLPIPARSGTVKLSQCLEHFTREEVLDGDEKPTCSKCQMRRKCTKSFSIQKFPK 233
Query: 412 YMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHD 471
+++H++RF+ F K +V+FP+ L+L + P Y+L H
Sbjct: 234 ILVIHLKRFSPMERFRGKLNVMVDFPLTGLDLSAFAAPKVPG------CTYNLYGVANHS 287
Query: 472 GKPEGGFYRVFVQRKSEELW 491
G G Y + + W
Sbjct: 288 GTTYSGHYTAYCKHPYSGEW 307
>gi|340503036|gb|EGR29667.1| ubiquitin carboxyl-terminal hydrolase family protein, putative
[Ichthyophthirius multifiliis]
Length = 381
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 134/348 (38%), Gaps = 77/348 (22%)
Query: 190 RHVGLNNIKETDFVNVTIQSLMRVTPLRNFFL--IPENYRHCKSPLVH-RFGDLTRKIWH 246
+ VGL NI T ++N +Q L + L +FL I E ++ K+ V F L RK+
Sbjct: 24 QQVGLQNIGNTCYINSALQCLFNCSQLLEYFLQKIDEKEKNQKNKGVSDEFAKLIRKMAT 83
Query: 247 ARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT--------- 297
+ P E ++ K K F+ Q + EF+ LL L+ DL
Sbjct: 84 NNKLTPEY-PSELKSSIEKICTK-FKGNNQEDCQEFLRTLLENLNDDLNRVIGKKPYKEL 141
Query: 298 ----------------------KKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSD 335
+++ SII + F G+L + K EK S
Sbjct: 142 EADPKNQQDLQKISDIWFQYYKERDNSIITDIFTGQLLSIVSCLK---------CEKQSY 192
Query: 336 GGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVME-----KNIIPQVPLFNILKKFDGET 390
D+ F+ L L F V E + + + PL D
Sbjct: 193 AFDN------------FMDLSLSFTNNHRFNFVYELERLIEQFLKEEPL-------DNAY 233
Query: 391 VTEVVRPHV-ARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPL 449
+ + H ++ R+ + +LP +++H++RF + EK + F ++NL+L+ +I
Sbjct: 234 YCQKCKNHTKSKRRFEIQKLPDVLVIHIKRFYFGSIRKEKLLHKITFNIQNLDLRKFIKN 293
Query: 450 PTPKENEKLRSK------YDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+ K+ +KL K YDLI + H G GG Y + + W
Sbjct: 294 SSNKQ-QKLYDKSVLDCTYDLIGIVNHMGGLHGGHYYAECKNPYDGTW 340
>gi|449501186|ref|XP_004161301.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Cucumis
sativus]
Length = 949
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
Query: 396 RPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKEN 455
+P AR + + RLP+ +++H++RF+ + FF K T V+FP+ +L+L +YI +N
Sbjct: 828 KPQQARKKLDLWRLPEILVIHLKRFSYSRFFKNKLETFVDFPIDDLDLSNYIAY----QN 883
Query: 456 EKLRSKYDLIANIVHDGKPEGGFYRVFV 483
L ++Y L A H G G Y +V
Sbjct: 884 SHLSNRYMLYAVSNHYGGMGAGHYTAYV 911
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 76/183 (41%), Gaps = 17/183 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-------ENYRHCKSPLVHRFGDLTRKI 244
GL N+ T F+N +Q L+ L ++FL +N K L FGDL RK+
Sbjct: 349 TGLQNLGNTCFMNSALQCLVHTPKLVDYFLGNFQKEINYDNPLGMKGELALAFGDLLRKL 408
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSII 304
W + P + + +F Q + EF+S+LL+ LH DL K
Sbjct: 409 WAP---GSKSVPPRMFKLKLANFAPQFSGYNQHDSQEFLSFLLDGLHEDLNRVKCKPYFE 465
Query: 305 YECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLGL 357
+ +G + EV +E +N ++ ND G + +++ PF+ L L
Sbjct: 466 AKDVEGRRDEEVAEEYWQNHLARNDSIIVDLCQGQYRSTLVCPACNKLSVTFDPFMYLSL 525
Query: 358 DLP 360
LP
Sbjct: 526 PLP 528
>gi|327276735|ref|XP_003223123.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like isoform 1
[Anolis carolinensis]
Length = 897
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 86/221 (38%), Gaps = 59/221 (26%)
Query: 132 NVYACLVCGKYYQGRGQK--SHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------- 181
N++ACL Y G G+ H+ HS E H + +NL T +V+C E+
Sbjct: 39 NLWACLENRCSYVGCGESHIDHSTIHSQETKHCLTVNLTTLRVWCYACSKEVFLDRKLRS 98
Query: 182 -------------NDPSLEDIRH--------------------------------VGLNN 196
D +++DIR GL N
Sbjct: 99 HSLLQNVRLSHQAPDINMQDIRLPSIPTLKIPLIATFDDLDIQVDEEDEFKARGLTGLKN 158
Query: 197 IKETDFVNVTIQSLMRVTPLRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQV 254
I T ++N +Q+L PL FFL N R K P + R + L ++WH ++ G V
Sbjct: 159 IGNTCYMNAALQALSNCPPLTQFFLDCGNLARTDKKPAICRSYYKLMTELWH-KSRPGAV 217
Query: 255 SPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR 295
P Q + K FR Q + EF+ L++ LH +L+
Sbjct: 218 VPTNLFQGI-KTVNPAFRGYSQQDAQEFLRCLMDLLHEELK 257
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V P+ + +H++RF + F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 560 KVQHFPEILCIHLKRFRHDLMFSTKIGTHVSFPLEGLDLQPFLAKDSPAQ----IVMYDL 615
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + W
Sbjct: 616 LSVICHHGTAINGHYIAYCWNNLNNRW 642
>gi|195389480|ref|XP_002053404.1| GJ23355 [Drosophila virilis]
gi|194151490|gb|EDW66924.1| GJ23355 [Drosophila virilis]
Length = 906
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 136/322 (42%), Gaps = 46/322 (14%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKS-------PLVHRFGDLTRKI 244
GL N+ T ++N +Q L TP F I + Y++ S ++ L +++
Sbjct: 572 TGLKNLGNTCYMNSILQCLSN-TPQLMEFCISDKYKNYISRRNKTNGQVIEEVAALIKEL 630
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK--KNTS 302
W+ + +K S L+ V+ +K FR Q + EF++ L++ LHSDL+ + +
Sbjct: 631 WNGQ-YKCVAS--RDLRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHSDLQTLRVPRKRD 687
Query: 303 IIYECFQGELEVVKE---IPKNTISGNDQNTEKGSDGGDDHDNITTETSRMP-FLMLGLD 358
II + LE K I ++ G ++T K T E++ F L L+
Sbjct: 688 IISAAEKAWLEFTKSQESIIQHLFYGQIKSTVKCV-------TCTKESATYECFSNLSLE 740
Query: 359 LPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMR 418
LP F + + + ++ +K G A + +++LP +++H++
Sbjct: 741 LPANANFCYLHQC-----MDMYFSGEKIHGWNCPNCKTKRDAIKKLDISKLPPVLVIHLK 795
Query: 419 RF----TKNNFFVEKNPTLVNFPVKNLELKDYIP-----LPTPKENEKLRSKYDLIANIV 469
RF + +++K L FP++NLE+K Y TPK Y L A
Sbjct: 796 RFYADPSNAGAYIKKQNYL-QFPLENLEMKPYTARVESRAVTPK-------TYQLYAVSN 847
Query: 470 HDGKPEGGFYRVFVQRKSEELW 491
H G EGG Y F + W
Sbjct: 848 HYGTMEGGHYTAFCKSAHYGRW 869
>gi|195998045|ref|XP_002108891.1| hypothetical protein TRIADDRAFT_19410 [Trichoplax adhaerens]
gi|190589667|gb|EDV29689.1| hypothetical protein TRIADDRAFT_19410 [Trichoplax adhaerens]
Length = 333
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 118/334 (35%), Gaps = 87/334 (26%)
Query: 203 VNVTIQSLMRVTPLRNFFLIP--------ENYRHCKSPLVHRFGDLTRKIWHARNFKGQV 254
+N +Q L+ PL +FL EN + F + W +
Sbjct: 1 MNSILQCLINSVPLTKYFLTSTYRTDLNRENPLGMHGEVAEEFATIVHASWCGE--YRYI 58
Query: 255 SPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-------------------- 294
SP +F + M RF Q + E + LL+ LH D+
Sbjct: 59 SPTDF-KLTMSKFADRFAGNSQHDSQELLMILLDGLHEDINRVKQKDYIEDDDTSHLPDE 117
Query: 295 --------RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTE 346
R+ ++N SII E FQG+ K+T+ +T
Sbjct: 118 EAANIAWDRHKRRNQSIIVELFQGQF-------KSTLVC-----------------LTCN 153
Query: 347 TSRMPF-LMLGLDLPPPP-----LFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVA 400
+ F + + L +P P D +E LF+ ++ G+ +
Sbjct: 154 KRSVTFQVFMNLSVPLPSHRSHCTLNDCLE--------LFSKAERVQGDNKWFCSKCKCY 205
Query: 401 R---MRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEK 457
R + + +LP +++H +RF+ + +K T VNFPV L LK+ P +
Sbjct: 206 REAMKKLEIWKLPPVLLIHFKRFSGTGLYWQKADTAVNFPVNGLTLKNQTVGPKHRH--- 262
Query: 458 LRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+L A H G EGG Y F Q + W
Sbjct: 263 ----YNLYAVSNHYGTLEGGHYTAFCQNPYAKEW 292
>gi|218184165|gb|EEC66592.1| hypothetical protein OsI_32808 [Oryza sativa Indica Group]
Length = 788
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 11/135 (8%)
Query: 177 DGYEINDPSLEDIRHV-GLNNIKETDFVNVTIQSLMRVTPLRNFFLI-------PENYRH 228
DGY ++ + +DI + GL+N+ T F+N IQSL+ PL +FL EN
Sbjct: 295 DGYSFSNGTKDDIHGLSGLHNLGNTCFMNSAIQSLVHTPPLVEYFLQDYSREINTENPLG 354
Query: 229 CKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLN 288
+ L FG+L RK+W A + ++P F + + + + F Q + E +++LL+
Sbjct: 355 LQGELATAFGELLRKLWSAG--RTSIAPRPFKTKLSRFAPQ-FSGYNQHDSQELLAFLLD 411
Query: 289 TLHSDLRNTKKNTSI 303
LH DL KK I
Sbjct: 412 GLHEDLNRVKKKPYI 426
>gi|115481222|ref|NP_001064204.1| Os10g0160000 [Oryza sativa Japonica Group]
gi|78707833|gb|ABB46808.1| Ubiquitin carboxyl-terminal hydrolase family protein, expressed
[Oryza sativa Japonica Group]
gi|113638813|dbj|BAF26118.1| Os10g0160000 [Oryza sativa Japonica Group]
gi|215767234|dbj|BAG99462.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222612471|gb|EEE50603.1| hypothetical protein OsJ_30790 [Oryza sativa Japonica Group]
Length = 931
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 11/135 (8%)
Query: 177 DGYEINDPSLEDIRHV-GLNNIKETDFVNVTIQSLMRVTPLRNFFLI-------PENYRH 228
DGY ++ + +DI + GL+N+ T F+N IQSL+ PL +FL EN
Sbjct: 295 DGYSFSNGTKDDIHGLSGLHNLGNTCFMNSAIQSLVHTPPLVEYFLQDYSREINTENPLG 354
Query: 229 CKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLN 288
+ L FG+L RK+W A + ++P F + + + + F Q + E +++LL+
Sbjct: 355 LQGELATAFGELLRKLWSAG--RTSIAPRPFKTKLSRFAPQ-FSGYNQHDSQELLAFLLD 411
Query: 289 TLHSDLRNTKKNTSI 303
LH DL KK I
Sbjct: 412 GLHEDLNRVKKKPYI 426
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 400 ARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLR 459
A + + RLP+ +++H++RF+ + F K T VNFP+ +L++ Y
Sbjct: 792 ASKKLDLWRLPEILVVHLKRFSYSRFMKNKLDTFVNFPIHDLDMSRY----ANHSRGDQP 847
Query: 460 SKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+L A I H G GG Y + + E+ W
Sbjct: 848 PIYELYAVINHYGGMGGGHYSAYAKLVEEDSW 879
>gi|126310809|ref|XP_001371948.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Monodelphis
domestica]
Length = 564
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 129/337 (38%), Gaps = 65/337 (19%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R + L F D+
Sbjct: 209 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRLEVPSGGR-TQQELTEAFADVLGA 267
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F + V + F Q + EF+ L+ LH ++ R ++
Sbjct: 268 LWHPDSCEA-VNPTRF-RTVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 325
Query: 303 IIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNIT------TETSRMPFLMLG 356
I+ + +P+ G + SD DD N+ E S++ L +G
Sbjct: 326 ILTD------TPAPSLPRR--GGALLEEPELSD--DDQANLMWKRYLDREDSKIVDLFVG 375
Query: 357 -----------------------LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE 393
L LP P + ++ LF ++ + E
Sbjct: 376 QLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEELESENAPV 435
Query: 394 VVRPHVARMRYR------VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYI 447
R R R R V R P+ ++LH+ RF+ + ++K+ V+FP++ L L D+
Sbjct: 436 CDR---CRQRTRSTKKLTVQRFPRILVLHLNRFSASRGSIKKSSVGVDFPLQRLSLGDF- 491
Query: 448 PLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQ 484
++ Y L A H G G Y +
Sbjct: 492 -----ASDKAGSPVYQLYALCNHSGSVHYGHYTALCR 523
>gi|390179554|ref|XP_003736924.1| GA19137, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859895|gb|EIM52997.1| GA19137, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 328
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 115/283 (40%), Gaps = 56/283 (19%)
Query: 233 LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHS 292
++ L +++W+ + +K S L++V+ + FR Q + EF++ L++ LHS
Sbjct: 37 VIEEVAALIKELWNGQ-YKCVASRD--LRSVVGQYQNIFRGVDQQDSHEFLTILMDWLHS 93
Query: 293 DLRN--------------------TKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEK 332
DL+ TK SII F G++ K+T+ N E
Sbjct: 94 DLQTLDVSRMRETIGAAEQAWLDFTKAKESIILHLFYGQM-------KSTVKCVTCNKES 146
Query: 333 GSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVT 392
T E F L L+LPP + E + + ++ ++ G
Sbjct: 147 A----------TYEC----FSNLSLELPP-----NANECQLNQCMDMYFSGERIQGWNCP 187
Query: 393 EVVRPHVARMRYRVTRLPKYMILHMRRF---TKNNFFVEKNPTLVNFPVKNLELKDYIPL 449
A + +++LP +++H++RF T N K ++FP++NLE+ YI
Sbjct: 188 NCKTKRAAIKKLDISKLPPVLVVHLKRFYADTSNTGSYAKKQNFLSFPLQNLEMSPYI-- 245
Query: 450 PTPKENEKLRSK-YDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
E+ + K Y L A H G EGG Y F + + W
Sbjct: 246 -ARAESRAAKPKTYQLYAVSNHYGTMEGGHYTAFCKSPNYGRW 287
>gi|383854138|ref|XP_003702579.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Megachile
rotundata]
Length = 542
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 126/330 (38%), Gaps = 55/330 (16%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHR-------- 236
VGL N+ T F+NV +QS ++ + IP + P HR
Sbjct: 187 VGLRNLGNTCFMNVVLQSFNNISHFCEYLTQMPCLEGIPFD-----EPPTHRGRIVTPGR 241
Query: 237 ---------FGDLTRKIWHARNFKGQ----VSPHEFLQAVMKASKKRFRIGVQSNPVEFM 283
+ RK+ N G +SP E L V+ RFR Q + EF+
Sbjct: 242 AKEFMNDALLAEELRKVLLGLNLGGSNGQAISP-ECLFLVIWKVVPRFRGYQQQDAHEFL 300
Query: 284 SWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNI 343
+++L+ LH++L +G+ +V + T+ +D
Sbjct: 301 TYMLDRLHTELLQLLPRLGHEPLGLRGKQSIVTAVFGGTLLSVVHCMNCRTD-------- 352
Query: 344 TTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVP-----LFNILKKFDGET--VTEVVR 396
+ PF L LD+P L + E+ + + F + + D E +
Sbjct: 353 --SKTHEPFQDLSLDIPDR-LQRRTKEQEEVCSLTYSLSRFFKVEELADSELYFCDNCMG 409
Query: 397 PHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYI--PLPTPKE 454
+ R+ + RLP + LH++RF N + K T V+FP+K+L++ + + K
Sbjct: 410 KQRSTKRFWIHRLPNVLCLHIKRFRWCNSYRSKVDTQVDFPMKSLDMSAFTVRGMTGTKL 469
Query: 455 NEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
YDL A IVH G G G Y F
Sbjct: 470 GASNSHLYDLAAVIVHHGSGAGTGHYTAFA 499
>gi|345305034|ref|XP_001506997.2| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Ornithorhynchus anatinus]
Length = 368
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 117/307 (38%), Gaps = 25/307 (8%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPENYRHCKSPLVHRFGDLTRKIWHA 247
GL N+ T ++N +Q L + PL +FL + +R + + L +W
Sbjct: 42 TGLRNLGNTCYMNAVLQCLASIAPLVEYFLSGKYVTALHRD-RGEVATALAYLLTDMWLG 100
Query: 248 RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYEC 307
V+P F AV F Q + EF+ ++LN LH L+ ++
Sbjct: 101 D--ADCVAPEVFRLAVGD-RHPAFGKKSQQDAQEFLIFVLNALHEALKKPRRR------- 150
Query: 308 FQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPF---LMLGLDLPPPPL 364
+ + +G + +G +D + + + L LP P
Sbjct: 151 -KPSEKAASRRGGKAAAGESSIVSQLFEGQLSYDVVCLKCDSCSYKGETFTVLSLPIPSH 209
Query: 365 FKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNN 424
++ +++ + + + L+ + + A +R V + P +I H++RF
Sbjct: 210 YQCSLQE-CLERFFQQDTLRWNNQIYCSYCDAKQDAAVRATVVKAPNVVIFHLKRFECYG 268
Query: 425 FFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQ 484
K T + +P+ NL+L YI P K KY+L A + H G +GG Y +
Sbjct: 269 KMKRKLRTNIRYPLANLDLSPYIYPPCRKH-----PKYNLWAVVNHFGDLDGGHYTALCK 323
Query: 485 RKSEELW 491
+ W
Sbjct: 324 NTVTQSW 330
>gi|296216400|ref|XP_002754520.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Callithrix
jacchus]
Length = 597
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 124/321 (38%), Gaps = 57/321 (17%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
GL N+ T F+N +Q L LR++ L HR R + H N
Sbjct: 268 AGLRNLGNTCFMNSILQCLSNTRELRDYCL-------------HRL--YVRDLHHGSNAH 312
Query: 252 GQ---------VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-------R 295
VSP EF + + + RF Q + EF+ +LL+ LH+++ +
Sbjct: 313 TALREASPNEVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPK 371
Query: 296 NTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLML 355
+ +N + + +G K + + D + D T PF L
Sbjct: 372 SNPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDL 431
Query: 356 GLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE---------TVTEVVRPHVARMRYRV 406
L + K P+V L + ++ F E T ++ +
Sbjct: 432 SLPI----------AKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSI 481
Query: 407 TRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIA 466
R PK ++LH++RF+++ K T VNFP+++L+L+++ EN + Y+L A
Sbjct: 482 QRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFA-----SENTN-HAVYNLYA 535
Query: 467 NIVHDGKPEGGFYRVFVQRKS 487
H G GG Y + +S
Sbjct: 536 VSNHSGTTMGGHYTAYSNCRS 556
>gi|297696632|ref|XP_002825491.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Pongo
abelii]
gi|395746706|ref|XP_002825492.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Pongo
abelii]
gi|395746709|ref|XP_003778495.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Pongo abelii]
Length = 1118
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 150/389 (38%), Gaps = 115/389 (29%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI+ S IR++ GL N+ T ++N +Q L
Sbjct: 742 RENKPTCYPKA-EISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 800
Query: 216 LRNFFLIPENYRHC-------------KSPLVHRFGDLTRKIWHARNFKGQ---VSPHEF 259
L ++F R+C K + FG + + +W GQ +SP +F
Sbjct: 801 LADYF-----NRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDF 850
Query: 260 LQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL------------------------- 294
+ K + + F Q + E + +L++ LH DL
Sbjct: 851 KITIGKINDQ-FAGYSQQDSQELLLFLMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEH 909
Query: 295 ---RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMP 351
++ + N SII FQG+ K+T+ + SR
Sbjct: 910 AWQKHKQLNESIIVALFQGQF-------KSTVQCL----------------TCHKKSRTF 946
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR----- 405
+ L LP K ++ + L+ F E +T+ R + + R R
Sbjct: 947 EAFMYLSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRARRDSLK 996
Query: 406 ---VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKY 462
+ +LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK N K KY
Sbjct: 997 KIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNNLK---KY 1051
Query: 463 DLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+L + H G +GG Y + + + + W
Sbjct: 1052 NLFSVSNHYGGLDGGHYTAYCKNAARQRW 1080
>gi|31873342|emb|CAD97662.1| hypothetical protein [Homo sapiens]
Length = 1118
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 150/390 (38%), Gaps = 117/390 (30%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI+ S IR++ GL N+ T ++N +Q L
Sbjct: 742 RENKPTCYPKA-EISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 800
Query: 216 LRNFFLIPENYRHC-------------KSPLVHRFGDLTRKIWHARNFKGQ---VSPHEF 259
L ++F R+C K + FG + + +W GQ +SP +F
Sbjct: 801 LADYF-----NRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDF 850
Query: 260 LQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL------------------------- 294
+ K + +F Q + E + +L++ LH DL
Sbjct: 851 KITIGKIND-QFAGYSQQDSQELLLFLMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEH 909
Query: 295 ---RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMP 351
++ + N SII FQG+ K+T+ +T
Sbjct: 910 AWQKHKQLNESIIVALFQGQF-------KSTVQC-----------------LTCHKKSRA 945
Query: 352 F-LMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR---- 405
F + L LP K ++ + L+ F E +T+ R + + R R
Sbjct: 946 FEAFMYLSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRARRDSL 995
Query: 406 ----VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSK 461
+ +LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK N K K
Sbjct: 996 KKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNNLK---K 1050
Query: 462 YDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+L + H G +GG Y + + + + W
Sbjct: 1051 YNLFSVSNHYGGLDGGHYTAYCKNAARQRW 1080
>gi|212646332|ref|NP_507513.2| Protein E01B7.1 [Caenorhabditis elegans]
gi|193248211|emb|CAB05712.2| Protein E01B7.1 [Caenorhabditis elegans]
Length = 811
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 123/321 (38%), Gaps = 37/321 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFF--------LIPENYRHCKSPLVHRFGDLTRK 243
VGL N+ T F++ T+Q L + L F + ++ K + F L+
Sbjct: 478 VGLFNMGNTCFMSATLQCLFQTPGLAEVFTKKVFVSKVNTQSRLGSKGVISAGFASLSDM 537
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
IW+ F + P FLQ + G Q + EF +LL+ LH D T + I
Sbjct: 538 IWNG-TFTA-IRPSRFLQLFSDTVYQPLSDGRQHDASEFQIFLLDALHED---TNQAQRI 592
Query: 304 IYEC-FQGELEVVKEIP-----KNTISGNDQNTEKGSDGGDDHDNITTETSRMPF---LM 354
+E + G + KE S + N GS + +T S F +
Sbjct: 593 SFEQNYHGGAGIAKEAADFLKKHYQFSLSPVNRLLGSITVSEIRCLTCGASSATFEENTI 652
Query: 355 LGLDLPP-PPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRL---P 410
+ +++P D+ ++ Q K DG++ + R R ++L P
Sbjct: 653 ISVEIPSNSSCSLDMCLRSHFSQT-------KLDGDSRWNCPKCKEPRASTRTSKLWQPP 705
Query: 411 KYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVH 470
MI+H++RF N EKN V F +++ Y+ P E + Y L A +H
Sbjct: 706 PVMIIHLKRFALFNGDFEKNTAAVTFETARFDVRPYLHEMAPAE----KPVYKLYAATLH 761
Query: 471 DGKPEGGFYRVFVQRKSEELW 491
+G+ G Y + W
Sbjct: 762 NGRLNSGHYTAVASHLRSDKW 782
>gi|441615298|ref|XP_004088287.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Nomascus
leucogenys]
Length = 1011
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 152/390 (38%), Gaps = 117/390 (30%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI+ S IR++ GL N+ T ++N +Q L
Sbjct: 635 RENKPTCYPKA-EISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 693
Query: 216 LRNFFLIPENYRHC-------------KSPLVHRFGDLTRKIWHARNFKGQ---VSPHEF 259
L ++F R+C K + FG + + +W GQ +SP +F
Sbjct: 694 LADYF-----NRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDF 743
Query: 260 LQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL------------------------- 294
+ K + +F Q + E + +L++ LH DL
Sbjct: 744 KITIGKIND-QFAGYSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEH 802
Query: 295 ---RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITT-ETSRM 350
++ + N SII FQG+ K+T+ +T + SR
Sbjct: 803 AWQKHKQLNESIIVALFQGQF-------KSTVQC-----------------LTCHKKSRT 838
Query: 351 PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR---- 405
+ L LP K ++ + L+ F E +T+ R + + R R
Sbjct: 839 FEAFMYLSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRARRDSL 888
Query: 406 ----VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSK 461
+ +LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK N K K
Sbjct: 889 KKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNNLK---K 943
Query: 462 YDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+L + H G +GG Y + + + + W
Sbjct: 944 YNLFSVSNHYGGLDGGHYTAYCKNAARQRW 973
>gi|340721026|ref|XP_003398928.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Bombus
terrestris]
Length = 541
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 129/331 (38%), Gaps = 57/331 (17%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHR-------- 236
VGL N+ T F+NV +QS ++ + IP + P HR
Sbjct: 186 VGLRNLGNTCFMNVVLQSFNNISHFCEYLTQMPCLEGIPFD-----EPPTHRGRIVTPGR 240
Query: 237 ---------FGDLTRKIWHARNFKGQ----VSPHEFLQAVMKASKKRFRIGVQSNPVEFM 283
+ RK+ N G +SP E L V+ RFR Q + EF+
Sbjct: 241 AKEFMSDALLAEELRKVLLGLNLGGSNGQAISP-ECLFLVIWKVVPRFRGYQQQDAHEFL 299
Query: 284 SWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNI 343
+++L+ LH++L +G+ +V + T+ +D
Sbjct: 300 TYMLDRLHTELLQLLPRLGHEPLGLRGKQSIVTAVFGGTLLSVVHCMNCRTDS------- 352
Query: 344 TTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE--------VV 395
+ PF L LD+P L + E+ + + +++ + F E + + +
Sbjct: 353 ---KTHEPFQDLSLDIPDR-LQRRTKEQEEVCSLT-YSLTRFFKVEELADSELYFCDNCM 407
Query: 396 RPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYI--PLPTPK 453
+ R+ + RLP + LH++RF N + K T V+FP+K+L++ + + K
Sbjct: 408 GKQRSTKRFWIHRLPNVLCLHIKRFRWCNSYRSKVDTQVDFPMKSLDMSAFTVRGVSGTK 467
Query: 454 ENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
YDL A IVH G G G Y F
Sbjct: 468 LGASNSHLYDLAAVIVHHGSGAGTGHYTAFA 498
>gi|350404719|ref|XP_003487196.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Bombus
impatiens]
Length = 541
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 129/331 (38%), Gaps = 57/331 (17%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHR-------- 236
VGL N+ T F+NV +QS ++ + IP + P HR
Sbjct: 186 VGLRNLGNTCFMNVVLQSFNNISHFCEYLTQMPCLEGIPFD-----EPPTHRGRIVTPGR 240
Query: 237 ---------FGDLTRKIWHARNFKGQ----VSPHEFLQAVMKASKKRFRIGVQSNPVEFM 283
+ RK+ N G +SP E L V+ RFR Q + EF+
Sbjct: 241 AKEFMSDALLAEELRKVLLGLNLGGSNGQAISP-ECLFLVIWKVVPRFRGYQQQDAHEFL 299
Query: 284 SWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNI 343
+++L+ LH++L +G+ +V + T+ +D
Sbjct: 300 TYMLDRLHTELLQLLPRLGHEPLGLRGKQSIVTAVFGGTLLSVVHCMNCRTDS------- 352
Query: 344 TTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE--------VV 395
+ PF L LD+P L + E+ + + +++ + F E + + +
Sbjct: 353 ---KTHEPFQDLSLDIPDR-LQRRTKEQEEVCSLT-YSLTRFFKVEELADSELYFCDNCM 407
Query: 396 RPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYI--PLPTPK 453
+ R+ + RLP + LH++RF N + K T V+FP+K+L++ + + K
Sbjct: 408 GKQRSTKRFWIHRLPNVLCLHIKRFRWCNSYRSKVDTQVDFPMKSLDMSAFTVRGVSGTK 467
Query: 454 ENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
YDL A IVH G G G Y F
Sbjct: 468 LGASNSHLYDLAAVIVHHGSGAGTGHYTAFA 498
Score = 41.6 bits (96), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 119 DFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH-VYINLRTEKVYC-LP 176
D C+V + + + CL CG + GR HA H E H V I+ V+C +
Sbjct: 24 DLPFVCAVCGTEKSTWLCLYCGAIHCGRYVAGHALQHHEENNQHCVCIDCENLAVFCYMC 83
Query: 177 DGYEINDPS---LEDIRHV 192
D Y IND + +E IR V
Sbjct: 84 DEYVINDTTSGQIEKIRRV 102
>gi|190684690|ref|NP_005145.3| ubiquitin carboxyl-terminal hydrolase 8 [Homo sapiens]
gi|190684692|ref|NP_001122082.1| ubiquitin carboxyl-terminal hydrolase 8 [Homo sapiens]
gi|190684694|ref|NP_001122083.1| ubiquitin carboxyl-terminal hydrolase 8 [Homo sapiens]
gi|731046|sp|P40818.1|UBP8_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 8; AltName:
Full=Deubiquitinating enzyme 8; AltName: Full=Ubiquitin
isopeptidase Y; Short=hUBPy; AltName: Full=Ubiquitin
thioesterase 8; AltName:
Full=Ubiquitin-specific-processing protease 8
gi|83405557|gb|AAI10591.1| Ubiquitin specific peptidase 8 [Homo sapiens]
gi|119597805|gb|EAW77399.1| ubiquitin specific peptidase 8, isoform CRA_a [Homo sapiens]
gi|119597806|gb|EAW77400.1| ubiquitin specific peptidase 8, isoform CRA_a [Homo sapiens]
gi|119597807|gb|EAW77401.1| ubiquitin specific peptidase 8, isoform CRA_a [Homo sapiens]
gi|168278493|dbj|BAG11126.1| ubiquitin carboxyl-terminal hydrolase 8 [synthetic construct]
Length = 1118
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 150/389 (38%), Gaps = 115/389 (29%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI+ S IR++ GL N+ T ++N +Q L
Sbjct: 742 RENKPTCYPKA-EISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 800
Query: 216 LRNFFLIPENYRHC-------------KSPLVHRFGDLTRKIWHARNFKGQ---VSPHEF 259
L ++F R+C K + FG + + +W GQ +SP +F
Sbjct: 801 LADYF-----NRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDF 850
Query: 260 LQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL------------------------- 294
+ K + + F Q + E + +L++ LH DL
Sbjct: 851 KITIGKINDQ-FAGYSQQDSQELLLFLMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEH 909
Query: 295 ---RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMP 351
++ + N SII FQG+ K+T+ + SR
Sbjct: 910 AWQKHKQLNESIIVALFQGQF-------KSTVQCL----------------TCHKKSRTF 946
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR----- 405
+ L LP K ++ + L+ F E +T+ R + + R R
Sbjct: 947 EAFMYLSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRARRDSLK 996
Query: 406 ---VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKY 462
+ +LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK N K KY
Sbjct: 997 KIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNNLK---KY 1051
Query: 463 DLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+L + H G +GG Y + + + + W
Sbjct: 1052 NLFSVSNHYGGLDGGHYTAYCKNAARQRW 1080
>gi|40789062|dbj|BAA06225.2| KIAA0055 [Homo sapiens]
Length = 1120
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 149/384 (38%), Gaps = 105/384 (27%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI+ S IR++ GL N+ T ++N +Q L
Sbjct: 744 RENKPTCYPKA-EISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 802
Query: 216 LRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ---VSPHEFLQAVM 264
L ++F + N K + FG + + +W GQ +SP +F +
Sbjct: 803 LADYFNRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDFKITIG 857
Query: 265 KASKKRFRIGVQSNPVEFMSWLLNTLHSDL----------------------------RN 296
K + + F Q + E + +L++ LH DL ++
Sbjct: 858 KINDQ-FAGYSQQDSQELLLFLMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEHAWQKH 916
Query: 297 TKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLG 356
+ N SII FQG+ K+T+ + SR +
Sbjct: 917 KQLNESIIVALFQGQF-------KSTVQCL----------------TCHKKSRTFEAFMY 953
Query: 357 LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR--------VT 407
L LP K ++ + L+ F E +T+ R + + R R +
Sbjct: 954 LSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIW 1003
Query: 408 RLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIAN 467
+LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK N K KY+L +
Sbjct: 1004 KLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNNLK---KYNLFSV 1058
Query: 468 IVHDGKPEGGFYRVFVQRKSEELW 491
H G +GG Y + + + + W
Sbjct: 1059 SNHYGGLDGGHYTAYCKNAARQRW 1082
>gi|332235543|ref|XP_003266963.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1
[Nomascus leucogenys]
gi|332235545|ref|XP_003266964.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2
[Nomascus leucogenys]
gi|332235547|ref|XP_003266965.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 3
[Nomascus leucogenys]
Length = 1117
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 150/389 (38%), Gaps = 115/389 (29%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI+ S IR++ GL N+ T ++N +Q L
Sbjct: 741 RENKPTCYPKA-EISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 799
Query: 216 LRNFFLIPENYRHC-------------KSPLVHRFGDLTRKIWHARNFKGQ---VSPHEF 259
L ++F R+C K + FG + + +W GQ +SP +F
Sbjct: 800 LADYF-----NRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDF 849
Query: 260 LQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL------------------------- 294
+ K + + F Q + E + +L++ LH DL
Sbjct: 850 KITIGKINDQ-FAGYSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEH 908
Query: 295 ---RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMP 351
++ + N SII FQG+ K+T+ + SR
Sbjct: 909 AWQKHKQLNESIIVALFQGQF-------KSTVQCL----------------TCHKKSRTF 945
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR----- 405
+ L LP K ++ + L+ F E +T+ R + + R R
Sbjct: 946 EAFMYLSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRARRDSLK 995
Query: 406 ---VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKY 462
+ +LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK N K KY
Sbjct: 996 KIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNNLK---KY 1050
Query: 463 DLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+L + H G +GG Y + + + + W
Sbjct: 1051 NLFSVSNHYGGLDGGHYTAYCKNAARQRW 1079
>gi|402874297|ref|XP_003900978.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase
8 [Papio anubis]
Length = 1109
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 150/389 (38%), Gaps = 115/389 (29%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI+ S IR++ GL N+ T ++N +Q L
Sbjct: 733 RENKPTCYPKA-EISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 791
Query: 216 LRNFFLIPENYRHC-------------KSPLVHRFGDLTRKIWHARNFKGQ---VSPHEF 259
L ++F R+C K + FG + + +W GQ +SP +F
Sbjct: 792 LADYF-----NRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDF 841
Query: 260 LQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL------------------------- 294
+ K + + F Q + E + +L++ LH DL
Sbjct: 842 KITIGKINDQ-FAGYSQQDSQELLLFLMDGLHEDLNKADNRKRYKEENNEHLDDFKAAEH 900
Query: 295 ---RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMP 351
++ + N SII FQG+ K+T+ + SR
Sbjct: 901 AWQKHKQLNESIIVALFQGQF-------KSTVQCL----------------TCHKKSRTF 937
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR----- 405
+ L LP K ++ + L+ F E +T+ R + + R R
Sbjct: 938 EAFMYLSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRARRDSLK 987
Query: 406 ---VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKY 462
+ +LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK N K KY
Sbjct: 988 KIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNNLK---KY 1042
Query: 463 DLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+L + H G +GG Y + + + + W
Sbjct: 1043 NLFSVSNHYGGLDGGHYTAYCKNAARQRW 1071
>gi|397515262|ref|XP_003827873.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Pan paniscus]
Length = 899
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 150/389 (38%), Gaps = 115/389 (29%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI+ S IR++ GL N+ T ++N +Q L
Sbjct: 523 RENKPTCYPKA-EISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 581
Query: 216 LRNFFLIPENYRHC-------------KSPLVHRFGDLTRKIWHARNFKGQ---VSPHEF 259
L ++F R+C K + FG + + +W GQ +SP +F
Sbjct: 582 LADYF-----NRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDF 631
Query: 260 LQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL------------------------- 294
+ K + + F Q + E + +L++ LH DL
Sbjct: 632 KITIGKINDQ-FAGYSQQDSQELLLFLMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEH 690
Query: 295 ---RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMP 351
++ + N SII FQG+ K+T+ + SR
Sbjct: 691 AWQKHKQLNESIIVALFQGQF-------KSTVQCL----------------TCHKKSRTF 727
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR----- 405
+ L LP K ++ + L+ F E +T+ R + + R R
Sbjct: 728 EAFMYLSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRARRDSLK 777
Query: 406 ---VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKY 462
+ +LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK N K KY
Sbjct: 778 KIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNNLK---KY 832
Query: 463 DLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+L + H G +GG Y + + + + W
Sbjct: 833 NLFSVSNHYGGLDGGHYTAYCKNAARQRW 861
>gi|395822737|ref|XP_003784667.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Otolemur
garnettii]
Length = 1087
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 149/384 (38%), Gaps = 105/384 (27%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI+ S IR++ GL N+ T ++N +Q L
Sbjct: 711 RENKPTCYPKA-EISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 769
Query: 216 LRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ---VSPHEFLQAVM 264
L ++F + N K + FG + + +W GQ +SP +F +
Sbjct: 770 LADYFNRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDFKITIG 824
Query: 265 KASKKRFRIGVQSNPVEFMSWLLNTLHSDL----------------------------RN 296
K + + F Q + E + +L++ LH DL ++
Sbjct: 825 KINDQ-FAGYSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEQAWQKH 883
Query: 297 TKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLG 356
+ N SII FQG+ K+T+ + SR +
Sbjct: 884 KQLNESIIVALFQGQF-------KSTVQCL----------------TCHKKSRTFEAFMY 920
Query: 357 LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR--------VT 407
L LP K ++ + L+ F E +T+ R + + R R +
Sbjct: 921 LSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIW 970
Query: 408 RLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIAN 467
+LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK N K KY+L +
Sbjct: 971 KLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNNLK---KYNLFSV 1025
Query: 468 IVHDGKPEGGFYRVFVQRKSEELW 491
H G +GG Y + + + + W
Sbjct: 1026 SNHYGGLDGGHYTAYCKNAARQRW 1049
>gi|158258232|dbj|BAF85089.1| unnamed protein product [Homo sapiens]
Length = 1118
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 150/389 (38%), Gaps = 115/389 (29%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI+ S IR++ GL N+ T ++N +Q L
Sbjct: 742 RENKPTCYPKA-EISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 800
Query: 216 LRNFFLIPENYRHC-------------KSPLVHRFGDLTRKIWHARNFKGQ---VSPHEF 259
L ++F R+C K + FG + + +W GQ +SP +F
Sbjct: 801 LADYF-----NRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDF 850
Query: 260 LQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL------------------------- 294
+ K + + F Q + E + +L++ LH DL
Sbjct: 851 KITIGKINDQ-FAGYSQQDSQELLLFLMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEH 909
Query: 295 ---RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMP 351
++ + N SII FQG+ K+T+ + SR
Sbjct: 910 AWQKHKQLNESIIVALFQGQF-------KSTVQCL----------------TCHKKSRTF 946
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR----- 405
+ L LP K ++ + L+ F E +T+ R + + R R
Sbjct: 947 EAFMYLSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRARRDSLK 996
Query: 406 ---VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKY 462
+ +LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK N K KY
Sbjct: 997 KIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNNLK---KY 1051
Query: 463 DLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+L + H G +GG Y + + + + W
Sbjct: 1052 NLFSVSNHYGGLDGGHYTAYCKNAARQRW 1080
>gi|351699503|gb|EHB02422.1| Ubiquitin carboxyl-terminal hydrolase 11, partial [Heterocephalus
glaber]
Length = 911
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 4/118 (3%)
Query: 377 VPLFNILKKFDGET---VTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTL 433
+ LF ++ + E + + +A + + LP+ +I+H++RF+ + F EK TL
Sbjct: 734 IELFTTVETLEKENPWYCSSCKQHQLATKKLDLWMLPEILIIHLKRFSFSKFSHEKLDTL 793
Query: 434 VNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
V+FP+++L+ D++ P + +L KYDLIA H G G Y F K W
Sbjct: 794 VHFPIRDLDFSDFVIKPQNESAPELY-KYDLIAVSNHYGGIRDGHYTTFACNKDSGQW 850
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 81/204 (39%), Gaps = 24/204 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL---IPENYRHC-----KSPLVHRFGDLTRK 243
GL N+ T F+N T+Q L V L +FL E C K L + DL ++
Sbjct: 255 CGLTNLGNTCFMNSTLQCLSSVPQLTEYFLDNRYLEELNFCNPLGMKGELAEAYADLVKQ 314
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
W + V P+ F V + + F Q + E +S+LL+ LH DL KK +
Sbjct: 315 TWSGCH--RSVVPNVFKNKVSHFASQ-FLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYV 371
Query: 304 IYECFQG--ELEVVKEIPKNTISGND-------QNTEKGSDGGDDHDNITTETSRMPFLM 354
G + EV +E +N ND K + D N++ PF
Sbjct: 372 ELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFD--PFCY 429
Query: 355 LGLDLPPPPLFKDVMEKNIIPQVP 378
L +P P K V+E +P P
Sbjct: 430 LS--VPLPVCHKRVLEVFFVPMDP 451
>gi|426379059|ref|XP_004056223.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Gorilla gorilla
gorilla]
Length = 1118
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 150/389 (38%), Gaps = 115/389 (29%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI+ S IR++ GL N+ T ++N +Q L
Sbjct: 742 RENKPTCYPKA-EISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 800
Query: 216 LRNFFLIPENYRHC-------------KSPLVHRFGDLTRKIWHARNFKGQ---VSPHEF 259
L ++F R+C K + FG + + +W GQ +SP +F
Sbjct: 801 LADYF-----NRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDF 850
Query: 260 LQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL------------------------- 294
+ K + + F Q + E + +L++ LH DL
Sbjct: 851 KITIGKINDQ-FAGYSQQDSQELLLFLMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEH 909
Query: 295 ---RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMP 351
++ + N SII FQG+ K+T+ + SR
Sbjct: 910 AWQKHKQLNESIIVALFQGQF-------KSTVQCL----------------TCHKKSRTF 946
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR----- 405
+ L LP K ++ + L+ F E +T+ R + + R R
Sbjct: 947 EAFMYLSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRARRDSLK 996
Query: 406 ---VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKY 462
+ +LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK N K KY
Sbjct: 997 KIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNNLK---KY 1051
Query: 463 DLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+L + H G +GG Y + + + + W
Sbjct: 1052 NLFSVSNHYGGLDGGHYTAYCKNAARQRW 1080
>gi|397635885|gb|EJK72050.1| hypothetical protein THAOC_06457, partial [Thalassiosira oceanica]
Length = 528
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/343 (20%), Positives = 132/343 (38%), Gaps = 81/343 (23%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI--------PENYRHCKSPLVHRFGDLTRK 243
VGL+N+ T F+N ++Q L PL ++FL +N+ K L + ++ +
Sbjct: 107 VGLSNLGNTCFLNSSVQCLSNTIPLTDYFLGYDYRSEINHDNFLGSKGALASSYAEVVKH 166
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK----- 298
+W + + SP F ++ K + + F Q + E +++LL+ +H DL K
Sbjct: 167 LWLGQGAQ-HYSPGRFKSSLAKFAPQ-FDGSQQHDAQELLAYLLDGMHEDLNRVKSKPYI 224
Query: 299 -----------------------KNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSD 335
++ SI+ + FQG+L + ++ G
Sbjct: 225 EDDDCDGSNDDVDAIAAWSNYLRRDQSIVVDLFQGQL---RSRMTCSVCG---------- 271
Query: 336 GGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVV 395
++ + +L L P+ D + + + LF + G+
Sbjct: 272 ------KVSVKFDSFMYLSL-------PVTADC--RTLDDCLGLFCEEEYLSGDDAWYCP 316
Query: 396 R--PHV-ARMRYRVTRLPKYMILHMRRF----TKNNFFVEKNPTLVNFPVKNLELKDYIP 448
R HV A + + LP +I+H++RF + +E++ +++P+ +L
Sbjct: 317 RCKCHVDAAKKMDLFMLPPILIVHLKRFEFSESGRRSKIERD---ISYPLSEWDLSS--- 370
Query: 449 LPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+ K LR YDL A H G GG Y + + W
Sbjct: 371 --SKKGEGGLRPVYDLYAACHHSGTAGGGHYTATAVNRFDGRW 411
>gi|194383128|dbj|BAG59120.1| unnamed protein product [Homo sapiens]
Length = 1012
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 150/389 (38%), Gaps = 115/389 (29%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI+ S IR++ GL N+ T ++N +Q L
Sbjct: 636 RENKPTCYPKA-EISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 694
Query: 216 LRNFFLIPENYRHC-------------KSPLVHRFGDLTRKIWHARNFKGQ---VSPHEF 259
L ++F R+C K + FG + + +W GQ +SP +F
Sbjct: 695 LADYF-----NRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDF 744
Query: 260 LQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL------------------------- 294
+ K + +F Q + E + +L++ LH DL
Sbjct: 745 KITIGKIND-QFAGYSQQDSQELLLFLMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEH 803
Query: 295 ---RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMP 351
++ + N SII FQG+ K+T+ + SR
Sbjct: 804 AWQKHKQLNESIIVALFQGQF-------KSTVQCL----------------TCHKKSRTF 840
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR----- 405
+ L LP K ++ + L+ F E +T+ R + + R R
Sbjct: 841 EAFMYLSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRARRDSLK 890
Query: 406 ---VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKY 462
+ +LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK N K KY
Sbjct: 891 KIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNNLK---KY 945
Query: 463 DLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+L + H G +GG Y + + + + W
Sbjct: 946 NLFSVSNHYGGLDGGHYTAYCKNAARQRW 974
>gi|221043762|dbj|BAH13558.1| unnamed protein product [Homo sapiens]
Length = 328
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 126/317 (39%), Gaps = 52/317 (16%)
Query: 203 VNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDLTRKIWHARNFKGQVSP 256
+N +Q L LR++ L R + + LV F L + IW + VSP
Sbjct: 1 MNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIWTSSP-NDVVSP 59
Query: 257 HEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT----KKNTSII-------- 304
EF + + + RF Q + EF+ +LL+ LH+++ K N +
Sbjct: 60 SEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNPENLDHLPDDEK 118
Query: 305 -YECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPP 363
+ ++ LE + G +++ +D G T PF L L +
Sbjct: 119 GRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCG------YCSTVFDPFWDLSLPIA--- 169
Query: 364 LFKDVMEKNIIPQVPLFNILKKFDGETVTE---------VVRPHVARMRYRVTRLPKYMI 414
K P+V L + ++ F E V + ++ + R PK ++
Sbjct: 170 -------KRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILV 222
Query: 415 LHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKP 474
LH++RF+++ K T VNFP+++L+L+++ EN + Y+L A H G
Sbjct: 223 LHLKRFSESRIRTSKLTTFVNFPLRDLDLREF-----ASENTN-HAVYNLYAVSNHSGTT 276
Query: 475 EGGFYRVFVQRKSEELW 491
GG Y + + W
Sbjct: 277 MGGHYTAYCRSPGTGEW 293
>gi|417405916|gb|JAA49648.1| Putative ubiquitin carboxyl-terminal hydrolase 8 [Desmodus rotundus]
Length = 1116
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 151/390 (38%), Gaps = 117/390 (30%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI S IR++ GL N+ T ++N +Q L
Sbjct: 740 RENKPTCYPKA-EITRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 798
Query: 216 LRNFFLIPENYRHC-------------KSPLVHRFGDLTRKIWHARNFKGQ---VSPHEF 259
L ++F R+C K + FG + + +W GQ +SP +F
Sbjct: 799 LADYF-----NRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDF 848
Query: 260 LQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL------------------------- 294
+ K + + F Q + E + +L++ LH DL
Sbjct: 849 KTTIGKINDQ-FAGYSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEY 907
Query: 295 ---RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITT-ETSRM 350
++ + N SII FQG+ K+T+ +T + SR
Sbjct: 908 AWQKHKQLNESIIVALFQGQF-------KSTVQC-----------------LTCHKRSRT 943
Query: 351 PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR---- 405
+ L LP K ++ + L+ F E +T+ R + + R R
Sbjct: 944 FEAFMYLSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRARRDSL 993
Query: 406 ----VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSK 461
+ +LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK N K K
Sbjct: 994 KKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNNLK---K 1048
Query: 462 YDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+L + H G +GG Y + + + + W
Sbjct: 1049 YNLFSVSNHYGGLDGGHYTAYCKNAARQRW 1078
>gi|348561662|ref|XP_003466631.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like [Cavia
porcellus]
Length = 566
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 129/337 (38%), Gaps = 66/337 (19%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 212 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 269
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 270 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 327
Query: 303 IIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNIT------TETSRMPFLMLG 356
I+ V +P+ G + SD DD N+ E S++ L +G
Sbjct: 328 ILAN------GPVPSLPRR--GGALLEEPELSD--DDRANLMWKRYLEREDSKIVDLFVG 377
Query: 357 -----------------------LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE 393
L LP P + ++ LF ++ + E
Sbjct: 378 QLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEELESENAPV 437
Query: 394 VVRPHVARMRYRVT------RLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYI 447
R R + R T R P+ ++LH+ RF+ + ++K+ V+FP++ L L D+
Sbjct: 438 CDR---CRQKTRSTKKLTVQRFPRILVLHLNRFSTSRGSIKKSSVGVDFPLQRLSLGDF- 493
Query: 448 PLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQ 484
++ Y L A H G G Y +
Sbjct: 494 -----ASDKAGSPIYQLYALCNHSGSVHYGHYTALCR 525
>gi|355778036|gb|EHH63072.1| Ubiquitin carboxyl-terminal hydrolase 8 [Macaca fascicularis]
gi|383422691|gb|AFH34559.1| ubiquitin carboxyl-terminal hydrolase 8 [Macaca mulatta]
Length = 1118
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 150/389 (38%), Gaps = 115/389 (29%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI+ S IR++ GL N+ T ++N +Q L
Sbjct: 742 RENKPTCYPKA-EISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 800
Query: 216 LRNFFLIPENYRHC-------------KSPLVHRFGDLTRKIWHARNFKGQ---VSPHEF 259
L ++F R+C K + FG + + +W GQ +SP +F
Sbjct: 801 LADYF-----NRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDF 850
Query: 260 LQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL------------------------- 294
+ K + + F Q + E + +L++ LH DL
Sbjct: 851 KITIGKINDQ-FAGYSQQDSQELLLFLMDGLHEDLNKADNRKRYKEENNEHLDDFKAAEH 909
Query: 295 ---RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMP 351
++ + N SII FQG+ K+T+ + SR
Sbjct: 910 AWQKHKQLNESIIVALFQGQF-------KSTVQCL----------------TCHKKSRTF 946
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR----- 405
+ L LP K ++ + L+ F E +T+ R + + R R
Sbjct: 947 EAFMYLSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRARRDSLK 996
Query: 406 ---VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKY 462
+ +LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK N K KY
Sbjct: 997 KIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNNLK---KY 1051
Query: 463 DLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+L + H G +GG Y + + + + W
Sbjct: 1052 NLFSVSNHYGGLDGGHYTAYCKNAARQRW 1080
>gi|427793029|gb|JAA61966.1| Putative ubiquitin carboxyl-terminal hydrolase, partial
[Rhipicephalus pulchellus]
Length = 1076
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 124/312 (39%), Gaps = 45/312 (14%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY-RHCKSPLVHRFGDLTRKIWHARNF 250
GL N+ T F+N IQ L PL N+ L +++ CK+ +L R + A
Sbjct: 168 AGLVNMGNTCFMNTVIQCLTYCPPLANYLLHQDDHCTKCKTLNFCMMCELQRHMKRALEK 227
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL-HSDLRN---------TKKN 300
G ++ +KA K F+ G Q + EF+ ++++ L + L N K
Sbjct: 228 SGDSIKPVYIYQRLKAIAKHFQFGQQEDAHEFLRYVIDNLWKAALANYDGGVKLDPASKE 287
Query: 301 TSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLP 360
T+++ E F G K N DH F+ L LD+
Sbjct: 288 TTVVNEIFGGYHRSQVTCMKCKEKSNTY----------DH-----------FMDLILDIK 326
Query: 361 PPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRF 420
+ +EK + P+ +L+ + +A+ R+ V R P ++RF
Sbjct: 327 NASSLETALEKFVEPE-----LLQNDNAYKCPRCNIKVMAQKRFTVHRAPNVATFQLKRF 381
Query: 421 TKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKP-EGGFY 479
N F K V++P ++LEL+ Y+ + K + + Y L A +VH G G Y
Sbjct: 382 DANRMFGGKITKHVSYP-EHLELRPYM---SDKHGDPV--TYRLNAVLVHLGASCNSGHY 435
Query: 480 RVFVQRKSEELW 491
+V R S W
Sbjct: 436 FCYV-RNSNGSW 446
>gi|426216987|ref|XP_004002735.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 1 [Ovis
aries]
Length = 565
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 124/339 (36%), Gaps = 70/339 (20%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 211 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 268
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ +
Sbjct: 269 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 326
Query: 304 IYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNIT------TETSRMPFLMLG- 356
I L P + G + SD DD N+ E S++ L +G
Sbjct: 327 I-------LASSPAPPPPRLGGALLEEPELSD--DDRANLMWKRYLEREDSKIVDLFVGQ 377
Query: 357 ----------------------LDLPPPPLFKDVMEKNIIPQVPLFNILKK---FDGETV 391
L LP P K + FN+ K + E
Sbjct: 378 LKSCLKCQACGYRSTTFEVFCDLSLPIP---KKGFAGGKVSLRDCFNLFTKEEELESENA 434
Query: 392 TEVVRPHVARMRYRVT------RLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKD 445
R R + R T R P+ ++LH+ RF+ + ++K+ V+FP++ L L D
Sbjct: 435 PVCDR---CRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKKSSVGVDFPLQRLSLGD 491
Query: 446 YIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQ 484
+ ++ Y L A H G G Y +
Sbjct: 492 F------ASDKAGSPVYQLYALCNHSGSVHYGHYTALCR 524
>gi|403274276|ref|XP_003928907.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 1118
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 150/389 (38%), Gaps = 115/389 (29%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI+ S IR++ GL N+ T ++N +Q L
Sbjct: 742 RENKPTCYPKA-EISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 800
Query: 216 LRNFFLIPENYRHC-------------KSPLVHRFGDLTRKIWHARNFKGQ---VSPHEF 259
L ++F R+C K + FG + + +W GQ +SP +F
Sbjct: 801 LADYF-----NRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDF 850
Query: 260 LQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL------------------------- 294
+ K + +F Q + E + +L++ LH DL
Sbjct: 851 KITIGKIND-QFAGYSQQDSQELLLFLMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEH 909
Query: 295 ---RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMP 351
++ + N SII FQG+ K+T+ + SR
Sbjct: 910 AWQKHKQLNESIIVALFQGQF-------KSTVQCL----------------TCHKKSRTF 946
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR----- 405
+ L LP K ++ + L+ F E +T+ R + + R R
Sbjct: 947 EAFMYLSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRARRDSLK 996
Query: 406 ---VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKY 462
+ +LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK N K KY
Sbjct: 997 KIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNNLK---KY 1051
Query: 463 DLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+L + H G +GG Y + + + + W
Sbjct: 1052 NLFSVSNHYGGLDGGHYTAYCKNAARQRW 1080
>gi|403274278|ref|XP_003928908.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2
[Saimiri boliviensis boliviensis]
Length = 1012
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 152/390 (38%), Gaps = 117/390 (30%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI+ S IR++ GL N+ T ++N +Q L
Sbjct: 636 RENKPTCYPKA-EISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 694
Query: 216 LRNFFLIPENYRHC-------------KSPLVHRFGDLTRKIWHARNFKGQ---VSPHEF 259
L ++F R+C K + FG + + +W GQ +SP +F
Sbjct: 695 LADYF-----NRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDF 744
Query: 260 LQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL------------------------- 294
+ K + +F Q + E + +L++ LH DL
Sbjct: 745 KITIGKIND-QFAGYSQQDSQELLLFLMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEH 803
Query: 295 ---RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITT-ETSRM 350
++ + N SII FQG+ K+T+ +T + SR
Sbjct: 804 AWQKHKQLNESIIVALFQGQF-------KSTVQC-----------------LTCHKKSRT 839
Query: 351 PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR---- 405
+ L LP K ++ + L+ F E +T+ R + + R R
Sbjct: 840 FEAFMYLSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRARRDSL 889
Query: 406 ----VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSK 461
+ +LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK N K K
Sbjct: 890 KKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNNLK---K 944
Query: 462 YDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+L + H G +GG Y + + + + W
Sbjct: 945 YNLFSVSNHYGGLDGGHYTAYCKNAARQRW 974
>gi|357145636|ref|XP_003573712.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like
[Brachypodium distachyon]
Length = 931
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 87/200 (43%), Gaps = 19/200 (9%)
Query: 177 DGYEINDPSLEDIRH--VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI-------PENYR 227
DGY ++D H GL+N+ T F+N IQ+L+ PL +FL EN
Sbjct: 296 DGYSSFSNGVKDDMHGLSGLHNLGNTCFMNSAIQALVHTPPLVQYFLKDYSQEINTENPL 355
Query: 228 HCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLL 287
+ L FGDL +K+W A + V P F ++ + +F Q + E +++LL
Sbjct: 356 GLQGELAVAFGDLLQKLWSAG--RTSVPPRAF-KSKLSRFAPQFSGYNQHDSQELLAFLL 412
Query: 288 NTLHSDLRNTKKNTSIIYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITT 345
+ LH DL KK I + G E E +E N + ND G +
Sbjct: 413 DGLHEDLNRVKKKPYIEAKDADGRPEEEFAEECWNNHKARNDSIIVDKFQGQYKSTLVCP 472
Query: 346 ETSRM-----PFLMLGLDLP 360
E +++ PF+ L L LP
Sbjct: 473 ECNKISVTFDPFMYLSLPLP 492
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 400 ARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLR 459
AR + + RLP+ +++H++RF+ + + K T V FP+ +L++ Y ++
Sbjct: 794 ARKKLDLWRLPEILVVHLKRFSYSRYMKNKLDTYVTFPIHDLDMSKY------AKHTSGP 847
Query: 460 SKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+L A I H G GG Y + + EE W
Sbjct: 848 PIYELYAVINHYGGLGGGHYSAYAKLVEEESW 879
>gi|114657016|ref|XP_001168761.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 6 [Pan
troglodytes]
gi|114657018|ref|XP_001168786.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 7 [Pan
troglodytes]
gi|332843784|ref|XP_001168674.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Pan
troglodytes]
gi|410355753|gb|JAA44480.1| ubiquitin specific peptidase 8 [Pan troglodytes]
gi|410355755|gb|JAA44481.1| ubiquitin specific peptidase 8 [Pan troglodytes]
gi|410355757|gb|JAA44482.1| ubiquitin specific peptidase 8 [Pan troglodytes]
gi|410355759|gb|JAA44483.1| ubiquitin specific peptidase 8 [Pan troglodytes]
Length = 1118
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 150/389 (38%), Gaps = 115/389 (29%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI+ S IR++ GL N+ T ++N +Q L
Sbjct: 742 RENKPTCYPKA-EISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 800
Query: 216 LRNFFLIPENYRHC-------------KSPLVHRFGDLTRKIWHARNFKGQ---VSPHEF 259
L ++F R+C K + FG + + +W GQ +SP +F
Sbjct: 801 LADYF-----NRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDF 850
Query: 260 LQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL------------------------- 294
+ K + +F Q + E + +L++ LH DL
Sbjct: 851 KITIGKIND-QFAGYSQQDSQELLLFLMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEH 909
Query: 295 ---RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMP 351
++ + N SII FQG+ K+T+ + SR
Sbjct: 910 AWQKHKQLNESIIVALFQGQF-------KSTVQCL----------------TCHKKSRTF 946
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR----- 405
+ L LP K ++ + L+ F E +T+ R + + R R
Sbjct: 947 EAFMYLSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRARRDSLK 996
Query: 406 ---VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKY 462
+ +LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK N K KY
Sbjct: 997 KIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNNLK---KY 1051
Query: 463 DLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+L + H G +GG Y + + + + W
Sbjct: 1052 NLFSVSNHYGGLDGGHYTAYCKNAARQRW 1080
>gi|296213993|ref|XP_002753525.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2
[Callithrix jacchus]
Length = 1118
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 150/389 (38%), Gaps = 115/389 (29%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI+ S IR++ GL N+ T ++N +Q L
Sbjct: 742 RENKPTCYPKA-EISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 800
Query: 216 LRNFFLIPENYRHC-------------KSPLVHRFGDLTRKIWHARNFKGQ---VSPHEF 259
L ++F R+C K + FG + + +W GQ +SP +F
Sbjct: 801 LADYF-----NRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDF 850
Query: 260 LQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL------------------------- 294
+ K + + F Q + E + +L++ LH DL
Sbjct: 851 KITIGKINDQ-FAGYSQQDSQELLLFLMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEH 909
Query: 295 ---RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMP 351
++ + N SII FQG+ K+T+ + SR
Sbjct: 910 AWQKHKQLNESIIVALFQGQF-------KSTVQCL----------------TCHKKSRTF 946
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR----- 405
+ L LP K ++ + L+ F E +T+ R + + R R
Sbjct: 947 EAFMYLSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRARRDSLK 996
Query: 406 ---VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKY 462
+ +LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK N K KY
Sbjct: 997 KIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNNLK---KY 1051
Query: 463 DLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+L + H G +GG Y + + + + W
Sbjct: 1052 NLFSVSNHYGGLDGGHYTAYCKNAARQRW 1080
>gi|327276737|ref|XP_003223124.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like isoform 2
[Anolis carolinensis]
Length = 890
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 85/214 (39%), Gaps = 52/214 (24%)
Query: 132 NVYACLVCGKYYQGRGQK--SHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------N 182
N++ACL Y G G+ H+ HS E H + +NL T +V+C E+ +
Sbjct: 39 NLWACLENRCSYVGCGESHIDHSTIHSQETKHCLTVNLTTLRVWCYACSKEVFLDRKLRS 98
Query: 183 DPSLEDIRH---------------------------------------VGLNNIKETDFV 203
L+++R GL NI T ++
Sbjct: 99 HSLLQNVRLSHQDIRLPSIPTLKIPLIATFDDLDIQVDEEDEFKARGLTGLKNIGNTCYM 158
Query: 204 NVTIQSLMRVTPLRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQ 261
N +Q+L PL FFL N R K P + R + L ++WH ++ G V P Q
Sbjct: 159 NAALQALSNCPPLTQFFLDCGNLARTDKKPAICRSYYKLMTELWH-KSRPGAVVPTNLFQ 217
Query: 262 AVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR 295
+ K FR Q + EF+ L++ LH +L+
Sbjct: 218 GI-KTVNPAFRGYSQQDAQEFLRCLMDLLHEELK 250
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V P+ + +H++RF + F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 553 KVQHFPEILCIHLKRFRHDLMFSTKIGTHVSFPLEGLDLQPFLAKDSPAQ----IVMYDL 608
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + W
Sbjct: 609 LSVICHHGTAINGHYIAYCWNNLNNRW 635
>gi|332843788|ref|XP_001168540.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Pan
troglodytes]
Length = 1012
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 150/389 (38%), Gaps = 115/389 (29%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI+ S IR++ GL N+ T ++N +Q L
Sbjct: 636 RENKPTCYPKA-EISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 694
Query: 216 LRNFFLIPENYRHC-------------KSPLVHRFGDLTRKIWHARNFKGQ---VSPHEF 259
L ++F R+C K + FG + + +W GQ +SP +F
Sbjct: 695 LADYF-----NRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDF 744
Query: 260 LQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL------------------------- 294
+ K + +F Q + E + +L++ LH DL
Sbjct: 745 KITIGKIND-QFAGYSQQDSQELLLFLMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEH 803
Query: 295 ---RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMP 351
++ + N SII FQG+ K+T+ + SR
Sbjct: 804 AWQKHKQLNESIIVALFQGQF-------KSTVQCL----------------TCHKKSRTF 840
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR----- 405
+ L LP K ++ + L+ F E +T+ R + + R R
Sbjct: 841 EAFMYLSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRARRDSLK 890
Query: 406 ---VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKY 462
+ +LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK N K KY
Sbjct: 891 KIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNNLK---KY 945
Query: 463 DLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+L + H G +GG Y + + + + W
Sbjct: 946 NLFSVSNHYGGLDGGHYTAYCKNAARQRW 974
>gi|301103855|ref|XP_002901013.1| ubiquitin-specific protease, putative [Phytophthora infestans
T30-4]
gi|262101351|gb|EEY59403.1| ubiquitin-specific protease, putative [Phytophthora infestans
T30-4]
Length = 1100
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 110/277 (39%), Gaps = 57/277 (20%)
Query: 112 NRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEK 171
N++ +D E C V + +V S+ Y EAG
Sbjct: 409 NKRWMDAQDELLCPVGTHKAVNASTVVASPVSTHSPASSYRYGRDFEAGR---------- 458
Query: 172 VYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFL--IPENYRHC 229
P E + VGL+N+ T F+N +Q L+ PLR +FL +PE C
Sbjct: 459 ----------GRPEFEGV--VGLSNLGNTCFMNSMLQCLINTAPLREYFLKKVPETGTLC 506
Query: 230 KSPLVHR-------------FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQ 276
+ ++R F L RK+W + FK V+P + L++V+ +F Q
Sbjct: 507 FTKEINRDNPLGMKGIMAVDFASLLRKMW-SNEFK-VVTPTK-LKSVIGQYAPQFAGYQQ 563
Query: 277 SNPVEFMSWLLNTLHSDL-------------RNTKKNTSIIYECFQGELEVVKEIPKNTI 323
+ E M++LL+ LH DL RN + + + E +Q L + +
Sbjct: 564 QDSQELMNFLLDGLHEDLNRVKAKPYTKPVERNGRSDADVAREEWQQFLRRNDSVIVDNF 623
Query: 324 SGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLP 360
G ++ SD H+++T + P++ L + +P
Sbjct: 624 MGQLRSHVTCSDADCGHESVTFD----PYMSLSVPIP 656
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 17/129 (13%)
Query: 376 QVPLFNILKKF-DGETVTEV-------VRPHV-ARMRYRVTRLPKYMILHMRRF--TKNN 424
++ LF+ L KF + E + E + HV A ++ + LPK +I H++RF +N+
Sbjct: 944 RLTLFDCLAKFTEREQLGEADAWYCPKCKSHVRAFKKFDLFSLPKVLIFHLKRFRYAQNS 1003
Query: 425 FFV--EKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVF 482
F++ +K TLV FPV+ L+L +++ P + YDL A H G GG Y
Sbjct: 1004 FYMHRDKISTLVEFPVQELDLAEFVVGP----DSGSARLYDLYAVSEHMGGLGGGHYTAV 1059
Query: 483 VQRKSEELW 491
+ W
Sbjct: 1060 AKNPVNRRW 1068
>gi|440803342|gb|ELR24249.1| Ubiquitin carboxylterminal hydrolase [Acanthamoeba castellanii str.
Neff]
Length = 916
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 9/130 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N T+Q L PL N+F ++ + C+ + R + A +
Sbjct: 12 AGLHNVGNTCFLNSTLQCLTYCPPLANYFQSRQHSKACRKVGFCAMCVMERHVVAALKAT 71
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-SDLRNTKK------NTSI 303
G + P E + + ++A K FR+G Q + EF+ +LL+ +H S L +K TS+
Sbjct: 72 SGAIVPKEIV-SQLRAIVKHFRLGRQEDAQEFLCYLLSGMHKSSLPQGEKLEARIEQTSV 130
Query: 304 IYECFQGELE 313
++ F G L+
Sbjct: 131 VHRIFGGHLQ 140
>gi|380817804|gb|AFE80776.1| ubiquitin carboxyl-terminal hydrolase 8 [Macaca mulatta]
Length = 1118
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 150/389 (38%), Gaps = 115/389 (29%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI+ S IR++ GL N+ T ++N +Q L
Sbjct: 742 RENKPTCYPKA-EISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 800
Query: 216 LRNFFLIPENYRHC-------------KSPLVHRFGDLTRKIWHARNFKGQ---VSPHEF 259
L ++F R+C K + FG + + +W GQ +SP +F
Sbjct: 801 LADYF-----NRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDF 850
Query: 260 LQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL------------------------- 294
+ K + + F Q + E + +L++ LH DL
Sbjct: 851 KITIGKINDQ-FAGYSQQDSQELLLFLMDGLHEDLNKADNRKRYKEENNEHLDDFKAAEH 909
Query: 295 ---RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMP 351
++ + N SII FQG+ K+T+ + SR
Sbjct: 910 AWQKHKQLNESIIVALFQGQF-------KSTVQCL----------------TCHKKSRTF 946
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR----- 405
+ L LP K ++ + L+ F E +T+ R + + R R
Sbjct: 947 EAFMYLSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRARRDSLK 996
Query: 406 ---VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKY 462
+ +LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK N K KY
Sbjct: 997 KIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNNLK---KY 1051
Query: 463 DLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+L + H G +GG Y + + + + W
Sbjct: 1052 NLFSVSNHYGGLDGGHYTAYCKNAARQRW 1080
>gi|157817586|ref|NP_001099972.1| ubiquitin carboxyl-terminal hydrolase 8 [Rattus norvegicus]
gi|149023197|gb|EDL80091.1| ubiquitin specific protease 8 (predicted) [Rattus norvegicus]
Length = 1081
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 149/384 (38%), Gaps = 105/384 (27%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI+ S IR++ GL N+ T ++N +Q L
Sbjct: 705 RENKPPCYPKA-EISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 763
Query: 216 LRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ---VSPHEFLQAVM 264
L ++F + N K + FG + + +W GQ +SP +F +
Sbjct: 764 LADYFNRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDFKVTIG 818
Query: 265 KASKKRFRIGVQSNPVEFMSWLLNTLHSDL----------------------------RN 296
K + + F Q + E + +L++ LH DL ++
Sbjct: 819 KINDQ-FAGSSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEHAWQKH 877
Query: 297 TKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLG 356
+ N SII FQG+ K+T+ + SR +
Sbjct: 878 KQLNESIIVALFQGQF-------KSTVQCL----------------TCHKKSRTFEAFMY 914
Query: 357 LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR--------VT 407
L LP K ++ + L+ F E +T+ R + + R R +
Sbjct: 915 LSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIW 964
Query: 408 RLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIAN 467
+LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK + K KY+L +
Sbjct: 965 KLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKSSLK---KYNLFSV 1019
Query: 468 IVHDGKPEGGFYRVFVQRKSEELW 491
H G +GG Y + + + + W
Sbjct: 1020 SNHYGGLDGGHYTAYCKNAARQRW 1043
>gi|145524988|ref|XP_001448316.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415860|emb|CAK80919.1| unnamed protein product [Paramecium tetraurelia]
Length = 482
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 137/328 (41%), Gaps = 62/328 (18%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP----LVHRFGDLTRKIW-- 245
VGL N+ T + N I + PL ++FL + P + F L +IW
Sbjct: 64 VGLKNLGNTCYFNTAIHCISHTQPLVDYFLSKAYKVNSSCPTSGNITKAFVSLMEQIWDD 123
Query: 246 -----HARNFK----GQ--------VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLN 288
+++FK GQ ++P + L + K SK RF +G Q + E +S+LL+
Sbjct: 124 ENCFAESKDFKQLVQGQKLKPYNKCINPIKLLNLLQKYSK-RFALGDQEDCQELLSYLLD 182
Query: 289 TLHSDLRNTKKNTSIIYECFQGE--------------LEVVKEIPKNTISGNDQNTEKGS 334
LH +L ++ N+ I + + GE L++ + I + G ++T +
Sbjct: 183 LLHQELNRSQPNSKSITKDYTGEYVDPKWAADSWGEHLKINRSIIVDLFQGQLKSTCQCQ 242
Query: 335 DGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEV 394
+ G PFL L L +P + +I + LF + G +
Sbjct: 243 ECGFQSHKFE------PFLFLNLPIPKQKV-------SIYKCLDLFQEPELLSGSCQWKC 289
Query: 395 VRPHVAR---MRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPT 451
+ R + ++ +LP +I+H++RF ++ K T+V FP++ L++ Y
Sbjct: 290 PNCKINRDFKKQIQLWKLPNQLIIHLKRFEFHHRKQVKLNTVVEFPLE-LDMAQYCV--- 345
Query: 452 PKENEKLRSKYDLIANIVHDGKPEGGFY 479
++ S Y L A HDG GG Y
Sbjct: 346 ----DQAISCYQLYAVAQHDGSSYGGHY 369
>gi|355692711|gb|EHH27314.1| Ubiquitin carboxyl-terminal hydrolase 8 [Macaca mulatta]
Length = 1118
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 150/389 (38%), Gaps = 115/389 (29%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI+ S IR++ GL N+ T ++N +Q L
Sbjct: 742 RENKPTCYPKA-EISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 800
Query: 216 LRNFFLIPENYRHC-------------KSPLVHRFGDLTRKIWHARNFKGQ---VSPHEF 259
L ++F R+C K + FG + + +W GQ +SP +F
Sbjct: 801 LADYF-----NRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDF 850
Query: 260 LQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL------------------------- 294
+ K + + F Q + E + +L++ LH DL
Sbjct: 851 KITIGKINDQ-FAGYSQQDSQELLLFLMDGLHEDLNKADNRKRYKEENNEHLDDFKAAEH 909
Query: 295 ---RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMP 351
++ + N SII FQG+ K+T+ + SR
Sbjct: 910 AWQKHKQLNESIIVALFQGQF-------KSTVQCL----------------TCHKKSRTF 946
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR----- 405
+ L LP K ++ + L+ F E +T+ R + + R R
Sbjct: 947 EAFMYLSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRARRDSLK 996
Query: 406 ---VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKY 462
+ +LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK N K KY
Sbjct: 997 KIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNNLK---KY 1051
Query: 463 DLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+L + H G +GG Y + + + + W
Sbjct: 1052 NLFSVSNHYGGLDGGHYTAYCKNAARQRW 1080
>gi|388453897|ref|NP_001252548.1| ubiquitin carboxyl-terminal hydrolase 8 [Macaca mulatta]
gi|387273381|gb|AFJ70185.1| ubiquitin carboxyl-terminal hydrolase 8 [Macaca mulatta]
Length = 1118
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 150/389 (38%), Gaps = 115/389 (29%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI+ S IR++ GL N+ T ++N +Q L
Sbjct: 742 RENKPTCYPKA-EISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 800
Query: 216 LRNFFLIPENYRHC-------------KSPLVHRFGDLTRKIWHARNFKGQ---VSPHEF 259
L ++F R+C K + FG + + +W GQ +SP +F
Sbjct: 801 LADYF-----NRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDF 850
Query: 260 LQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL------------------------- 294
+ K + + F Q + E + +L++ LH DL
Sbjct: 851 KITIGKINDQ-FAGYSQQDSQELLLFLMDGLHEDLNKADNRKRYKEENNEHLDDFKAAEH 909
Query: 295 ---RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMP 351
++ + N SII FQG+ K+T+ + SR
Sbjct: 910 AWQKHKQLNESIIVALFQGQF-------KSTVQCL----------------TCHKKSRTF 946
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR----- 405
+ L LP K ++ + L+ F E +T+ R + + R R
Sbjct: 947 EAFMYLSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRARRDSLK 996
Query: 406 ---VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKY 462
+ +LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK N K KY
Sbjct: 997 KIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNNLK---KY 1051
Query: 463 DLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+L + H G +GG Y + + + + W
Sbjct: 1052 NLFSVSNHYGGLDGGHYTAYCKNAARQRW 1080
>gi|332243835|ref|XP_003271077.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11 [Nomascus
leucogenys]
Length = 963
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 398 HVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEK 457
+A + + LP+ +I+H++RF+ F EK TLV FP+++L+ +++ P + N +
Sbjct: 809 QLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVIQPQNESNPE 868
Query: 458 LRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
L KYDLIA H G G Y F K W
Sbjct: 869 L-YKYDLIAVSNHYGGMRDGHYTTFACNKDSGQW 901
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 84/204 (41%), Gaps = 24/204 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPE-NYRH---CKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L V L +FL + E N+R+ K + + DL ++
Sbjct: 309 CGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQ 368
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
W + + PH F V + + F Q + E +S+LL+ LH DL KK +
Sbjct: 369 AWSGHH--RSIVPHVFKNKVGHFASQ-FLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYV 425
Query: 304 IYECFQG--ELEVVKEIPKNTISGND-------QNTEKGSDGGDDHDNITTETSRMPFLM 354
G + EV +E +N ND K + D N++ PF
Sbjct: 426 ELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFD--PFCY 483
Query: 355 LGLDLPPPPLFKDVMEKNIIPQVP 378
L +P P K V+E IP P
Sbjct: 484 LS--VPLPISHKRVLEVFFIPMDP 505
>gi|24234683|ref|NP_004642.2| ubiquitin carboxyl-terminal hydrolase 11 [Homo sapiens]
gi|251757432|sp|P51784.3|UBP11_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 11; AltName:
Full=Deubiquitinating enzyme 11; AltName: Full=Ubiquitin
thioesterase 11; AltName:
Full=Ubiquitin-specific-processing protease 11
gi|187954551|gb|AAI40850.1| Ubiquitin specific peptidase 11 [Homo sapiens]
Length = 963
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 398 HVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEK 457
+A + + LP+ +I+H++RF+ F EK TLV FP+++L+ +++ P + N +
Sbjct: 809 QLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVIQPQNESNPE 868
Query: 458 LRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
L KYDLIA H G G Y F K W
Sbjct: 869 L-YKYDLIAVSNHYGGMRDGHYTTFACNKDSGQW 901
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 84/204 (41%), Gaps = 24/204 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPE-NYRH---CKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L V L +FL + E N+R+ K + + DL ++
Sbjct: 309 CGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQ 368
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
W + + PH F V + + F Q + E +S+LL+ LH DL KK +
Sbjct: 369 AWSGHH--RSIVPHVFKNKVGHFASQ-FLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYV 425
Query: 304 IYECFQG--ELEVVKEIPKNTISGND-------QNTEKGSDGGDDHDNITTETSRMPFLM 354
G + EV +E +N ND K + D N++ PF
Sbjct: 426 ELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFD--PFCY 483
Query: 355 LGLDLPPPPLFKDVMEKNIIPQVP 378
L +P P K V+E IP P
Sbjct: 484 LS--VPLPISHKRVLEVFFIPMDP 505
>gi|38197496|gb|AAH00350.4| USP11 protein, partial [Homo sapiens]
Length = 921
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 398 HVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEK 457
+A + + LP+ +I+H++RF+ F EK TLV FP+++L+ +++ P + N +
Sbjct: 767 QLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVIQPQNESNPE 826
Query: 458 LRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
L KYDLIA H G G Y F K W
Sbjct: 827 LY-KYDLIAVSNHYGGMRDGHYTTFACNKDSGQW 859
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 11/120 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPE-NYRH---CKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L V L +FL + E N+R+ K + + DL ++
Sbjct: 267 CGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQ 326
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
W + + PH F V + + F Q + E +S+LL+ LH DL KK +
Sbjct: 327 AWSGHH--RSIVPHVFKNKVGHFASQ-FLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYV 383
>gi|380798193|gb|AFE70972.1| ubiquitin carboxyl-terminal hydrolase 11, partial [Macaca mulatta]
Length = 904
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 398 HVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEK 457
+A + + LP+ +I+H++RF+ F EK TLV FP+++L+ +++ P + N +
Sbjct: 750 QLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVIQPQNESNPE 809
Query: 458 LRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
L KYDLIA H G G Y F K W
Sbjct: 810 LY-KYDLIAVSNHYGGMRDGHYTTFACNKDSGQW 842
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 84/204 (41%), Gaps = 24/204 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPE-NYRH---CKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L V L +FL + E N+R+ K + + DL ++
Sbjct: 250 CGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQ 309
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
W + + PH F V + + F Q + E +S+LL+ LH DL KK +
Sbjct: 310 AWSGHH--RSIVPHVFKNKVGHFASQ-FLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYV 366
Query: 304 IYECFQG--ELEVVKEIPKNTISGND-------QNTEKGSDGGDDHDNITTETSRMPFLM 354
G + EV +E +N ND K + D N++ PF
Sbjct: 367 ELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFD--PFCY 424
Query: 355 LGLDLPPPPLFKDVMEKNIIPQVP 378
L +P P K V+E IP P
Sbjct: 425 LS--VPLPISHKRVLEVFFIPMDP 446
>gi|39795322|gb|AAH63668.1| USP11 protein, partial [Homo sapiens]
Length = 923
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 398 HVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEK 457
+A + + LP+ +I+H++RF+ F EK TLV FP+++L+ +++ P + N +
Sbjct: 769 QLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVIQPQNESNPE 828
Query: 458 LRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
L KYDLIA H G G Y F K W
Sbjct: 829 L-YKYDLIAVSNHYGGMRDGHYTTFACNKDSGQW 861
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 84/204 (41%), Gaps = 24/204 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPE-NYRH---CKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L V L +FL + E N+R+ K + + DL ++
Sbjct: 269 CGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQ 328
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
W + + PH F V + + F Q + E +S+LL+ LH DL KK +
Sbjct: 329 AWSGHH--RSIVPHVFKNKVGHFASQ-FLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYV 385
Query: 304 IYECFQG--ELEVVKEIPKNTISGND-------QNTEKGSDGGDDHDNITTETSRMPFLM 354
G + EV +E +N ND K + D N++ PF
Sbjct: 386 ELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFD--PFCY 443
Query: 355 LGLDLPPPPLFKDVMEKNIIPQVP 378
L +P P K V+E IP P
Sbjct: 444 LS--VPLPISHKRVLEVFFIPMDP 465
>gi|345496176|ref|XP_001603604.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Nasonia
vitripennis]
Length = 1000
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 127/334 (38%), Gaps = 70/334 (20%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRH--------CKSPLVHRFGDLTRK 243
GL N+ + ++N IQ L L +F + H + + + +
Sbjct: 664 TGLKNLGNSCYMNSIIQCLSNTVYLAKYFNDNKYTDHLNRNIDKVARGYVAEEVAQVIKA 723
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKN--- 300
+W + +K +SP + L+ V+ K +F Q + EF+ +LL+ +H+DL+ K
Sbjct: 724 LWRGQ-YKS-ISPRD-LKNVIGQYKMQFENFDQQDSHEFLMFLLDWMHNDLKQKIKTRYD 780
Query: 301 -----------------TSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNI 343
+S+I + F G+L E + N +T
Sbjct: 781 RALTIAETEWEKSMNGQSSVISKLFFGQLRSTIE----CLYCNQNST------------- 823
Query: 344 TTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF------DGETVTEVVRP 397
T ET F L + LP + L +KKF G P
Sbjct: 824 TYET----FNSLTMSLP------------TTNKCTLDECVKKFVSGQRVSGWKCPNCKVP 867
Query: 398 HVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEK 457
++ + +LP +++H+ RF + + ++EK T V+FP+ N ++ Y+ N
Sbjct: 868 REGMKKFDIAKLPHIIVIHLNRFGETSGWLEKKNTAVDFPLTNFIMRHYVVQDNDNFNNS 927
Query: 458 LRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+L A H G EGG Y + + + W
Sbjct: 928 QSYNYNLYAMSNHYGTMEGGHYTAYCKSNHQNKW 961
>gi|307172608|gb|EFN63967.1| Ubiquitin carboxyl-terminal hydrolase 8 [Camponotus floridanus]
Length = 971
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 115/296 (38%), Gaps = 28/296 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
GL N+ + ++N IQ L T L +F +Y L ++TR +
Sbjct: 675 TGLKNLGNSCYMNSIIQCLSNTTNLAKYF-TDNSY---ADDLNTTNDNMTRSQVVEEVAQ 730
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGE 311
V H+ +F Q + EF+++LL+ +H+DL KK + E E
Sbjct: 731 VAVGQHKL----------QFENYEQQDSHEFLTFLLDWMHNDL---KKEAKMPIEMTNAE 777
Query: 312 LEVVKEI--PKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVM 369
E K + ++ IS + + +T L + L D M
Sbjct: 778 KEWDKAMNSQRSIISDLFFGQLRSTITCSFCKQASTTYETFNSLTMSLSQSNRCTLNDCM 837
Query: 370 EKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEK 429
EK + Q K G + P A ++ +L +++H+ RF ++EK
Sbjct: 838 EKFVTGQ--------KVSGWKCPKCQTPRDATKKFDFVKLAPIVVIHLNRFADTGGWLEK 889
Query: 430 NPTLVNFPVKNLELKDYIPLPTPKENEKLRS-KYDLIANIVHDGKPEGGFYRVFVQ 484
T V+FP+ LK Y+ + K +R+ Y+L A H G EGG Y F +
Sbjct: 890 RNTAVDFPLTGFNLKPYLVVENTKAMNNIRNYNYNLYAMSNHYGTMEGGHYTAFCK 945
>gi|402909992|ref|XP_003917678.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 11 [Papio anubis]
Length = 963
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 398 HVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEK 457
+A + + LP+ +I+H++RF+ F EK TLV FP+++L+ +++ P + N +
Sbjct: 809 QLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVIQPQNESNPE 868
Query: 458 LRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
L KYDLIA H G G Y F K W
Sbjct: 869 L-YKYDLIAVSNHYGGMRDGHYTTFACNKDSGQW 901
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 84/204 (41%), Gaps = 24/204 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPE-NYRH---CKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L V L +FL + E N+R+ K + + DL ++
Sbjct: 309 CGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQ 368
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
W + + PH F V + + F Q + E +S+LL+ LH DL KK +
Sbjct: 369 AWSGHH--RSIVPHVFKNKVGHFASQ-FLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYV 425
Query: 304 IYECFQG--ELEVVKEIPKNTISGND-------QNTEKGSDGGDDHDNITTETSRMPFLM 354
G + EV +E +N ND K + D N++ PF
Sbjct: 426 ELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFD--PFCY 483
Query: 355 LGLDLPPPPLFKDVMEKNIIPQVP 378
L +P P K V+E IP P
Sbjct: 484 LS--VPLPISHKRVLEVFFIPMDP 505
>gi|348572270|ref|XP_003471916.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Cavia
porcellus]
Length = 1077
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 149/389 (38%), Gaps = 115/389 (29%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI+ S IR++ GL N+ T ++N +Q L
Sbjct: 701 RENKPACYPKA-EISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 759
Query: 216 LRNFFLIPENYRHC-------------KSPLVHRFGDLTRKIWHARNFKGQ---VSPHEF 259
L ++F R+C K + FG + + +W GQ +SP +F
Sbjct: 760 LADYF-----NRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDF 809
Query: 260 LQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL------------------------- 294
+ K + + F Q + E + +L++ LH DL
Sbjct: 810 KITIGKINDQ-FAGYSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEH 868
Query: 295 ---RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMP 351
++ + N SII FQG+ K+T+ SR
Sbjct: 869 AWQKHKQLNESIIVALFQGQF-------KSTVQCL----------------TCHRKSRTF 905
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR----- 405
+ L LP K ++ + L+ F E +T+ R + + R R
Sbjct: 906 EAFMYLSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRARRDSLK 955
Query: 406 ---VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKY 462
+ +LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK N K KY
Sbjct: 956 KIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNNLK---KY 1010
Query: 463 DLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+L + H G +GG Y + + + + W
Sbjct: 1011 NLFSVSNHYGGLDGGHYTAYCKNAARQRW 1039
>gi|355704756|gb|EHH30681.1| Ubiquitin carboxyl-terminal hydrolase 11 [Macaca mulatta]
Length = 929
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 398 HVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEK 457
+A + + LP+ +I+H++RF+ F EK TLV FP+++L+ +++ P + N +
Sbjct: 775 QLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVIQPQNESNPE 834
Query: 458 LRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
L KYDLIA H G G Y F K W
Sbjct: 835 LY-KYDLIAVSNHYGGMRDGHYTTFACNKDSGQW 867
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 84/204 (41%), Gaps = 24/204 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPE-NYRH---CKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L V L +FL + E N+R+ K + + DL ++
Sbjct: 275 CGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQ 334
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
W + + PH F V + + F Q + E +S+LL+ LH DL KK +
Sbjct: 335 AWSGHH--RSIVPHVFKNKVGHFASQ-FLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYV 391
Query: 304 IYECFQG--ELEVVKEIPKNTISGND-------QNTEKGSDGGDDHDNITTETSRMPFLM 354
G + EV +E +N ND K + D N++ PF
Sbjct: 392 ELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFD--PFCY 449
Query: 355 LGLDLPPPPLFKDVMEKNIIPQVP 378
L + LP K V+E IP P
Sbjct: 450 LSVPLPIS--HKRVLEVFFIPMDP 471
>gi|426216989|ref|XP_004002736.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 2 [Ovis
aries]
Length = 592
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 124/339 (36%), Gaps = 70/339 (20%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 238 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 295
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ +
Sbjct: 296 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 353
Query: 304 IYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNIT------TETSRMPFLMLG- 356
I L P + G + SD DD N+ E S++ L +G
Sbjct: 354 I-------LASSPAPPPPRLGGALLEEPELSD--DDRANLMWKRYLEREDSKIVDLFVGQ 404
Query: 357 ----------------------LDLPPPPLFKDVMEKNIIPQVPLFNILKK---FDGETV 391
L LP P K + FN+ K + E
Sbjct: 405 LKSCLKCQACGYRSTTFEVFCDLSLPIP---KKGFAGGKVSLRDCFNLFTKEEELESENA 461
Query: 392 TEVVRPHVARMRYRVT------RLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKD 445
R R + R T R P+ ++LH+ RF+ + ++K+ V+FP++ L L D
Sbjct: 462 PVCDR---CRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKKSSVGVDFPLQRLSLGD 518
Query: 446 YIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQ 484
+ ++ Y L A H G G Y +
Sbjct: 519 F------ASDKAGSPVYQLYALCNHSGSVHYGHYTALCR 551
>gi|119579693|gb|EAW59289.1| ubiquitin specific peptidase 11, isoform CRA_b [Homo sapiens]
gi|168277940|dbj|BAG10948.1| ubiquitin carboxyl-terminal hydrolase 11 [synthetic construct]
Length = 920
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 398 HVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEK 457
+A + + LP+ +I+H++RF+ F EK TLV FP+++L+ +++ P + N +
Sbjct: 766 QLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVIQPQNESNPE 825
Query: 458 LRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
L KYDLIA H G G Y F K W
Sbjct: 826 LY-KYDLIAVSNHYGGMRDGHYTTFACNKDSGQW 858
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 84/204 (41%), Gaps = 24/204 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPE-NYRH---CKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L V L +FL + E N+R+ K + + DL ++
Sbjct: 266 CGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQ 325
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
W + + PH F V + + F Q + E +S+LL+ LH DL KK +
Sbjct: 326 AWSGHH--RSIVPHVFKNKVGHFASQ-FLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYV 382
Query: 304 IYECFQG--ELEVVKEIPKNTISGND-------QNTEKGSDGGDDHDNITTETSRMPFLM 354
G + EV +E +N ND K + D N++ PF
Sbjct: 383 ELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFD--PFCY 440
Query: 355 LGLDLPPPPLFKDVMEKNIIPQVP 378
L +P P K V+E IP P
Sbjct: 441 LS--VPLPISHKRVLEVFFIPMDP 462
>gi|355757316|gb|EHH60841.1| Ubiquitin carboxyl-terminal hydrolase 11 [Macaca fascicularis]
Length = 933
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 398 HVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEK 457
+A + + LP+ +I+H++RF+ F EK TLV FP+++L+ +++ P + N +
Sbjct: 779 QLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVIQPQNESNPE 838
Query: 458 LRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
L KYDLIA H G G Y F K W
Sbjct: 839 LY-KYDLIAVSNHYGGMRDGHYTTFACNKDSGQW 871
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 84/204 (41%), Gaps = 24/204 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPE-NYRH---CKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L V L +FL + E N+R+ K + + DL ++
Sbjct: 279 CGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQ 338
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
W + + PH F V + + F Q + E +S+LL+ LH DL KK +
Sbjct: 339 AWSGHH--RSIVPHVFKNKVGHFASQ-FLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYV 395
Query: 304 IYECFQG--ELEVVKEIPKNTISGND-------QNTEKGSDGGDDHDNITTETSRMPFLM 354
G + EV +E +N ND K + D N++ PF
Sbjct: 396 ELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFD--PFCY 453
Query: 355 LGLDLPPPPLFKDVMEKNIIPQVP 378
L + LP K V+E IP P
Sbjct: 454 LSVPLPIS--HKRVLEVFFIPMDP 475
>gi|443717815|gb|ELU08703.1| hypothetical protein CAPTEDRAFT_136598 [Capitella teleta]
Length = 442
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 127/326 (38%), Gaps = 49/326 (15%)
Query: 176 PDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVH 235
P+ ++ P++ I GL N+ T F+N +Q L PL N+ E+ CK
Sbjct: 111 PEKVKLQWPAVRRIG-AGLTNLGNTCFLNSVLQCLTYTPPLVNYLSSSEHAHTCKQVGFC 169
Query: 236 RFGDLTRKIWHARNFKGQ-VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+L R GQ + PH LQ + K K G Q + EF+ ++++ +
Sbjct: 170 MVCELQRHFRRCYENGGQAIKPHAILQKI-KLIAKHMHWGRQEDAHEFLRYVIDAMQKSC 228
Query: 295 RN-------TKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTET 347
N K T++I + F G L K N +
Sbjct: 229 LNGNTKLDRISKETTVINQIFGGFLRSQVVCLKCKAKSNTYD------------------ 270
Query: 348 SRMPFLMLGLDLPPPPLFKDVMEKNIIP-QVPLFNILKKFDGETVTEVVRPHVARMRYRV 406
PFL + +D+ P + EK + P Q+ L N T+ + A+ R+ +
Sbjct: 271 ---PFLDISVDVKNVPNIQKAFEKFVQPEQLDLDN------AYNCTKCKQKVAAQKRFTI 321
Query: 407 TRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIA 466
+ + + ++R+ V ++ ++FP K L ++ Y+ + ++ Y L A
Sbjct: 322 HKPSNVLTIQLKRYGVMGGKVTRH---ISFPEK-LNIRPYMSV-----SQGAAITYQLYA 372
Query: 467 NIVHDG-KPEGGFYRVFVQRKSEELW 491
+VH G G Y +V R S + W
Sbjct: 373 VLVHMGHSTNSGHYYCYV-RSSNQAW 397
>gi|427795287|gb|JAA63095.1| Putative ubiquitin c-terminal hydrolase posttranslational
modification, partial [Rhipicephalus pulchellus]
Length = 929
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 8/116 (6%)
Query: 379 LFNILKKFDGE--TVTEVVRPH-VARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVN 435
LF +K E R H A ++ + LP+ +I+H++RF+ N F+ +K T V+
Sbjct: 755 LFTTTEKLGAEDPWYCPTCRSHKQATKKFDLWSLPRVLIIHLKRFSYNRFWRDKIDTHVD 814
Query: 436 FPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
FP+ +L + DYI +++E R+ YDLIA H G G Y + + K W
Sbjct: 815 FPITDLCMDDYI---INRKHE--RAVYDLIAVANHYGGMGAGHYTAYAKNKETHKW 865
>gi|109130539|ref|XP_001093504.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11 isoform 4
[Macaca mulatta]
Length = 963
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 398 HVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEK 457
+A + + LP+ +I+H++RF+ F EK TLV FP+++L+ +++ P + N +
Sbjct: 809 QLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVIQPQNESNPE 868
Query: 458 LRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
L KYDLIA H G G Y F K W
Sbjct: 869 L-YKYDLIAVSNHYGGMRDGHYTTFACNKDSGQW 901
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 84/204 (41%), Gaps = 24/204 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPE-NYRH---CKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L V L +FL + E N+R+ K + + DL ++
Sbjct: 309 CGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQ 368
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
W + + PH F V + + F Q + E +S+LL+ LH DL KK +
Sbjct: 369 AWSGHH--RSIVPHVFKNKVGHFASQ-FLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYV 425
Query: 304 IYECFQG--ELEVVKEIPKNTISGND-------QNTEKGSDGGDDHDNITTETSRMPFLM 354
G + EV +E +N ND K + D N++ PF
Sbjct: 426 ELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFD--PFCY 483
Query: 355 LGLDLPPPPLFKDVMEKNIIPQVP 378
L + LP K V+E IP P
Sbjct: 484 LSVPLPIS--HKRVLEVFFIPMDP 505
>gi|397476700|ref|XP_003809730.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 11 [Pan paniscus]
Length = 973
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 398 HVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEK 457
+A + + LP+ +I+H++RF+ F EK TLV FP+++L+ +++ P + N +
Sbjct: 802 QLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVIQPQNESNPE 861
Query: 458 LRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
L KYDLIA H G G Y F K W
Sbjct: 862 L-YKYDLIAVSNHYGGMRDGHYTTFACNKDSGQW 894
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 84/204 (41%), Gaps = 24/204 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPE-NYRH---CKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L V L +FL + E N+R+ K + + DL ++
Sbjct: 309 CGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQ 368
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
W + + PH F V + + F Q + E +S+LL+ LH DL KK +
Sbjct: 369 AWSGHH--RSIVPHVFKNKVGHFASQ-FLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYV 425
Query: 304 IYECFQG--ELEVVKEIPKNTISGND-------QNTEKGSDGGDDHDNITTETSRMPFLM 354
G + EV +E +N ND K + D N++ PF
Sbjct: 426 ELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFD--PFCY 483
Query: 355 LGLDLPPPPLFKDVMEKNIIPQVP 378
L +P P K V+E IP P
Sbjct: 484 LS--VPLPISHKRVLEVFFIPMDP 505
>gi|395546304|ref|XP_003775029.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11-like
[Sarcophilus harrisii]
Length = 935
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 396 RPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKEN 455
R +A + + LP+ +I+H++RF+ F EK TLV FP+++L+ ++I P E
Sbjct: 776 RHQLATKKLDLGALPEALIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFIIKPR-TEA 834
Query: 456 EKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+ KYDLIA H G G Y F + K W
Sbjct: 835 DPTPCKYDLIAVSNHYGGLRDGHYTTFARNKDSGQW 870
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 71/184 (38%), Gaps = 18/184 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL---IPENYRHC-----KSPLVHRFGDLTRK 243
GL N+ T F+N +Q L V PL +FL + C K + + DL ++
Sbjct: 217 CGLTNLGNTCFMNSALQCLSNVPPLTEYFLHNHYLKELNFCNPLGMKGEIAEAYADLVKQ 276
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
W + V P F V + + F Q + E +S+LL+ LH DL KK +
Sbjct: 277 AWSGHH--RSVVPRMFKTKVGHFASQ-FLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYV 333
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
G + EV E +N ND G + E ++ PF L
Sbjct: 334 ELRDAAGRPDQEVADEAWRNHKRRNDSVIVDTFHGLFKSTLVCPECGKVSVTFDPFCYLS 393
Query: 357 LDLP 360
+ LP
Sbjct: 394 VPLP 397
>gi|397515264|ref|XP_003827874.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Pan paniscus]
Length = 373
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 123/336 (36%), Gaps = 62/336 (18%)
Query: 182 NDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPENYRHCKSPLVHRF 237
N P + + GL N+ T VN +Q L + PL +FL I C S + F
Sbjct: 36 NQPHFQGV--TGLWNLGNTCCVNAILQCLCSILPLVEYFLTGKYITALQNDC-SEVATAF 92
Query: 238 GDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT 297
L +W + VSP F A+ F +Q + EF+ +LN L+ L+
Sbjct: 93 AYLMTDMWLGDS--DCVSPEIFWSALGNLYPA-FTKKMQQDAQEFLICVLNELYEALKKY 149
Query: 298 KKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETS--------R 349
+ YE KGS ITTETS +
Sbjct: 150 HYSRRRPYE-------------------------KGSTQRCCRKWITTETSVITQLFEEQ 184
Query: 350 MPFLMLGLDLPPPPLFKDVMEKNIIP-----QVPLFNILKKF---DGETVTEVVRPHVAR 401
+ + ++ L +V +P L + L+ F D T +
Sbjct: 185 LNYSIVCLKCEKCTYKNEVFTVFSLPIPSKYACSLRDCLQCFFQQDALTWNNEIHCSFCE 244
Query: 402 ------MRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKEN 455
+R +++ PK +I H++RF K T +++P+ NL+L YI K
Sbjct: 245 TKQETAVRASISKAPKIIIFHLKRFDIQGTTKRKLRTDIHYPLTNLDLTPYICSIFRK-- 302
Query: 456 EKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
KY+L A + H G EGG Y F + + W
Sbjct: 303 ---YPKYNLCAVVNHSGDLEGGHYTAFYKNSVTQAW 335
>gi|354471265|ref|XP_003497863.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Cricetulus
griseus]
Length = 1079
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 150/389 (38%), Gaps = 115/389 (29%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI+ S IR++ GL N+ T ++N +Q L
Sbjct: 703 RENKKSCRPKA-EISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 761
Query: 216 LRNFFLIPENYRHC-------------KSPLVHRFGDLTRKIWHARNFKGQ---VSPHEF 259
L ++F R+C K + FG + + +W GQ +SP +F
Sbjct: 762 LADYF-----NRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDF 811
Query: 260 LQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL------------------------- 294
+ K + + F Q + E + +L++ LH DL
Sbjct: 812 KVTIGKINDQ-FAGSSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEH 870
Query: 295 ---RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMP 351
++ + N SII FQG+ K+T+ + SR
Sbjct: 871 AWQKHKQLNESIIVALFQGQF-------KSTVQCL----------------TCHKKSRTF 907
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR----- 405
+ L LP K ++ + L+ F E +T+ R + + R R
Sbjct: 908 EAFMYLSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRARRDSLK 957
Query: 406 ---VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKY 462
+ +LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK + K KY
Sbjct: 958 KIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKSSLK---KY 1012
Query: 463 DLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+L + H G +GG Y + + + + W
Sbjct: 1013 NLFSVSNHYGGLDGGHYTAYCKNAARQRW 1041
>gi|296235360|ref|XP_002807922.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 11 [Callithrix jacchus]
Length = 927
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 398 HVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEK 457
+A + + LP+ +I+H++RF+ F EK TLV FP+++L+ +++ P + N +
Sbjct: 773 QLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVIKPQNESNPE 832
Query: 458 LRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
L KYDLIA H G G Y F K W
Sbjct: 833 L-YKYDLIAVSNHYGGMRDGHYTTFACNKDSGQW 865
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 84/204 (41%), Gaps = 24/204 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPE-NYRH---CKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L V L +FL + E N+R+ K + + DL ++
Sbjct: 273 CGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQ 332
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
W + + PH F V + + F Q + E +S+LL+ LH DL KK +
Sbjct: 333 AWSGHH--RSIVPHVFKNKVGHFASQ-FLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYV 389
Query: 304 IYECFQG--ELEVVKEIPKNTISGND-------QNTEKGSDGGDDHDNITTETSRMPFLM 354
G + EV +E +N ND K + D N++ PF
Sbjct: 390 ELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFD--PFCY 447
Query: 355 LGLDLPPPPLFKDVMEKNIIPQVP 378
L +P P K V+E IP P
Sbjct: 448 LS--VPLPISHKRVLEVFFIPMDP 469
>gi|1276912|gb|AAC50450.1| UHX1 protein [Homo sapiens]
gi|119579692|gb|EAW59288.1| ubiquitin specific peptidase 11, isoform CRA_a [Homo sapiens]
gi|194378128|dbj|BAG57814.1| unnamed protein product [Homo sapiens]
gi|1588732|prf||2209322A UHX1 gene
Length = 690
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 398 HVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEK 457
+A + + LP+ +I+H++RF+ F EK TLV FP+++L+ +++ P + N +
Sbjct: 536 QLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVIQPQNESNPE 595
Query: 458 LRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
L KYDLIA H G G Y F K W
Sbjct: 596 LY-KYDLIAVSNHYGGMRDGHYTTFACNKDSGQW 628
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 84/204 (41%), Gaps = 24/204 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPE-NYRH---CKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L V L +FL + E N+R+ K + + DL ++
Sbjct: 36 CGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQ 95
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
W + + PH F V + + F Q + E +S+LL+ LH DL KK +
Sbjct: 96 AWSGHH--RSIVPHVFKNKVGHFASQ-FLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYV 152
Query: 304 IYECFQG--ELEVVKEIPKNTISGND-------QNTEKGSDGGDDHDNITTETSRMPFLM 354
G + EV +E +N ND K + D N++ PF
Sbjct: 153 ELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFD--PFCY 210
Query: 355 LGLDLPPPPLFKDVMEKNIIPQVP 378
L + LP K V+E IP P
Sbjct: 211 LSVPLPIS--HKRVLEVFFIPMDP 232
>gi|193786257|dbj|BAG51540.1| unnamed protein product [Homo sapiens]
Length = 689
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 398 HVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEK 457
+A + + LP+ +I+H++RF+ F EK TLV FP+++L+ +++ P + N +
Sbjct: 535 QLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVIQPQNESNPE 594
Query: 458 LRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
L KYDLIA H G G Y F K W
Sbjct: 595 LY-KYDLIAVSNHYGGMRDGHYTTFACNKDSGQW 627
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 84/204 (41%), Gaps = 24/204 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPE-NYRH---CKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L V L +FL + E N+R+ K + + DL ++
Sbjct: 36 CGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQ 95
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
W + + PH F V + + F Q + E +S+LL+ LH DL KK +
Sbjct: 96 AWSGHH--RSIVPHVFKNKVGHFASQ-FLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYV 152
Query: 304 IYECFQG--ELEVVKEIPKNTISGND-------QNTEKGSDGGDDHDNITTETSRMPFLM 354
G + EV +E +N ND K + D N++ PF
Sbjct: 153 ELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFD--PFCY 210
Query: 355 LGLDLPPPPLFKDVMEKNIIPQVP 378
L + LP K V+E IP P
Sbjct: 211 LSVPLPIS--HKRVLEVFFIPMDP 232
>gi|145546913|ref|XP_001459139.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426962|emb|CAK91742.1| unnamed protein product [Paramecium tetraurelia]
Length = 1025
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 22/195 (11%)
Query: 182 NDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRH--------CKSPL 233
+D S++ I GL+N+ T F+N Q L PL+ +F+ + + L
Sbjct: 365 SDNSIKGI--AGLSNLGNTCFMNSGTQCLSNTYPLKEYFISNKYFEEINEDNPLGTNGQL 422
Query: 234 VHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSD 293
V +FG L +K+W K V P F +AV + + F+ Q + E +++LL+ LH D
Sbjct: 423 VRKFGSLLKKLWCGD--KNVVIPTSFKKAVGQF-QPMFKGFQQHDSSELITFLLDGLHED 479
Query: 294 LRNTKKNTSIIYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM- 350
L KK + + +QG ++EV KE +N ++ N Q+ G + T +
Sbjct: 480 LNRVKKKPYVESKDYQGRPDVEVAKESWENHLARN-QSIIVDLMHGQYKSTLKCPTCQQI 538
Query: 351 -----PFLMLGLDLP 360
PFL +GL +P
Sbjct: 539 SITFDPFLTVGLGIP 553
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 7/112 (6%)
Query: 387 DGETVTEVVRPHV-ARMRYRVTRLPKYMILHMRRF-TKNNFFVEKNPTLVNFPVKNLELK 444
D +V + HV A ++ + +I ++RF + FF +K T V FPV+ L+L
Sbjct: 869 DNAWYCKVCKEHVQAYKSMQIYKASDILIFTLKRFKASHGFFKQKLETFVEFPVQGLDLT 928
Query: 445 DYI-----PLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
++I P + E+ + YDL A H G GG Y + + W
Sbjct: 929 EFILNKNKPNENQIQEEQKKLIYDLYAVSNHFGGMGGGHYTAYAKNHENGKW 980
>gi|23503563|dbj|BAC20463.1| deubiquitinating enzyme [Homo sapiens]
Length = 921
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 398 HVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEK 457
+A + + LP+ +I+H++RF+ F EK TLV FP+++L+ +++ P + N +
Sbjct: 767 QLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVIQPQNESNPE 826
Query: 458 LRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
L KYDLIA H G G Y F K W
Sbjct: 827 L-YKYDLIAVSNHYGGMRDGHYTTFACNKDSGQW 859
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 84/204 (41%), Gaps = 24/204 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPE-NYRH---CKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L V L +FL + E N+R+ K + + DL ++
Sbjct: 267 CGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQ 326
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
W + + PH F V + + F Q + E +S+LL+ LH DL KK +
Sbjct: 327 AWSGHH--RSIVPHVFKNKVGHFASQ-FLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYV 383
Query: 304 IYECFQG--ELEVVKEIPKNTISGND-------QNTEKGSDGGDDHDNITTETSRMPFLM 354
G + EV +E +N ND K + D N++ PF
Sbjct: 384 ELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFD--PFCY 441
Query: 355 LGLDLPPPPLFKDVMEKNIIPQVP 378
L +P P K V+E IP P
Sbjct: 442 LS--VPLPISHKRVLEVFFIPMDP 463
>gi|55846814|gb|AAV67411.1| ubiquitin-specific protease 11 [Macaca fascicularis]
Length = 679
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 398 HVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEK 457
+A + + LP+ +I+H++RF+ F EK TLV FP+++L+ +++ P + N +
Sbjct: 533 QLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVIQPQNESNPE 592
Query: 458 LRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
L KYDLIA H G G Y F K W
Sbjct: 593 LY-KYDLIAVSNHYGGMRDGHYTTFACNKDSGQW 625
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 84/204 (41%), Gaps = 24/204 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPE-NYRH---CKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L V L +FL + E N+R+ K + + DL ++
Sbjct: 33 CGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQ 92
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKN--T 301
W + + PH F V + + F Q + E +S+LL+ LH DL KK
Sbjct: 93 AWSGHH--RSIVPHVFKNKVGHFASQ-FLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYV 149
Query: 302 SIIYECFQGELEVVKEIPKNTISGND-------QNTEKGSDGGDDHDNITTETSRMPFLM 354
+ + + EV +E +N ND K + D N++ PF
Sbjct: 150 ELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFD--PFCY 207
Query: 355 LGLDLPPPPLFKDVMEKNIIPQVP 378
L + LP K V+E IP P
Sbjct: 208 LSVPLPIS--HKRVLEVFFIPMDP 229
>gi|405968000|gb|EKC33109.1| Ubiquitin carboxyl-terminal hydrolase 8 [Crassostrea gigas]
Length = 1129
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 127/332 (38%), Gaps = 83/332 (25%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
GL N+ T ++N TIQ E+ + F + R +W + +K
Sbjct: 809 TGLRNLGNTCYMNSTIQ---------------ESQLGYYGEIADDFSVIIRALWSGQ-YK 852
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK------------ 299
++P +F V K + F Q + +F+++L++ LH L KK
Sbjct: 853 C-ITPRDFKYVVGKHNPD-FAGTTQQDSHDFLTFLMDGLHEGLNRVKKRPEIPEQDNDKM 910
Query: 300 ----------------NTSIIYECFQGELE-VVKEIPKNTISGNDQNTEKGSDGGDDHDN 342
N SII E FQG+L+ + + +S N Q
Sbjct: 911 GDSQAAELAWKHHQLCNESIIVELFQGQLKSTLMCLHCQKMSVNFQA------------- 957
Query: 343 ITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVAR- 401
F+ L L +PP ++ + LF ++ G + R V R
Sbjct: 958 ---------FMFLTLPIPP------SSRCSLGECLKLFLKEERLTGSSRWRCPRCKVDRD 1002
Query: 402 --MRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLR 459
+ + RLP+ +++ + RF + EK + V+FP +NL+L Y+ P + ++
Sbjct: 1003 AVKKIDIWRLPRILLIGLNRFVYKGQWREKINSFVDFPTRNLDLNPYLEGP-----KSIK 1057
Query: 460 SKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
S Y L A H G +GG Y + + E W
Sbjct: 1058 SSYRLYATSNHSGTLDGGHYTAYCRNPCTEKW 1089
>gi|66501571|ref|XP_392160.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Apis
mellifera]
Length = 541
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 129/331 (38%), Gaps = 57/331 (17%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHR-------- 236
VGL N+ T F+NV +QS ++ + IP + P HR
Sbjct: 186 VGLRNLGNTCFMNVVLQSFNNISHFCEYLTQMPCLEGIPFD-----EPPTHRGRIVTPGR 240
Query: 237 ---------FGDLTRKIWHARNFKGQ----VSPHEFLQAVMKASKKRFRIGVQSNPVEFM 283
+ RK+ N G +SP E L V+ RFR Q + EF+
Sbjct: 241 AKEFMSDALLAEELRKVLLGLNLGGSNGQAISP-ECLFLVIWKVVPRFRGYQQQDAHEFL 299
Query: 284 SWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNI 343
+++L+ LH++L +G+ +V + T+ +D
Sbjct: 300 TYMLDRLHTELLQLLPRLGHEPLGLRGKQSIVTAVFGGTLLSVVHCMNCRTDS------- 352
Query: 344 TTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE--------VV 395
+ PF L LD+P L + E+ + + +++ + F E + + +
Sbjct: 353 ---KTHEPFQDLSLDIPDR-LQRRTKEQEEVCSLT-YSLTRFFKVEELADSELYFCDNCM 407
Query: 396 RPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYI--PLPTPK 453
+ R+ + RLP + LH++RF N + K T V+FP+K+L++ + + K
Sbjct: 408 GKQRSTKRFWIHRLPNVLCLHIKRFRWCNSYRSKVDTQVDFPMKSLDMSAFTVRGVNGTK 467
Query: 454 ENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
YDL A IVH G G G Y F
Sbjct: 468 LGASNSHLYDLAAVIVHHGSGAGTGHYTAFA 498
>gi|332219294|ref|XP_003258791.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Nomascus
leucogenys]
Length = 565
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 124/338 (36%), Gaps = 68/338 (20%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 211 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 268
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ +
Sbjct: 269 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 326
Query: 304 IYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNIT------TETSRMPFLMLG- 356
I Q L K G+ + + SD DD N+ E S++ L +G
Sbjct: 327 ILANVQFPLTRRKR-------GSLREQMEASD--DDRANLMWKRYLEREDSKIVDLFVGQ 377
Query: 357 ----------------------LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEV 394
L LP P K + FN+ K E +
Sbjct: 378 LKSCLKCQACGYRSTTFEVFCDLSLPIP---KKGFAGGKVSLRDCFNLFTK--EEELESE 432
Query: 395 VRPHVARMRYR--------VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDY 446
P R R + V R P+ + L + RF+ + ++K+ V+FP++ L L D+
Sbjct: 433 NAPVCDRCRQKTRSTKKLTVQRFPRILGLDLNRFSASRGSIKKSSVGVDFPLQRLSLGDF 492
Query: 447 IPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQ 484
++ Y L A H G G Y +
Sbjct: 493 A------SDKAGSPVYQLYALCNHSGSVHYGHYTALCR 524
>gi|296213995|ref|XP_002753526.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 3
[Callithrix jacchus]
Length = 1012
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 150/389 (38%), Gaps = 115/389 (29%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI+ S IR++ GL N+ T ++N +Q L
Sbjct: 636 RENKPTCYPKA-EISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 694
Query: 216 LRNFFLIPENYRHC-------------KSPLVHRFGDLTRKIWHARNFKGQ---VSPHEF 259
L ++F R+C K + FG + + +W GQ +SP +F
Sbjct: 695 LADYF-----NRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDF 744
Query: 260 LQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL------------------------- 294
+ K + + F Q + E + +L++ LH DL
Sbjct: 745 KITIGKINDQ-FAGYSQQDSQELLLFLMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEH 803
Query: 295 ---RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMP 351
++ + N SII FQG+ K+T+ + SR
Sbjct: 804 AWQKHKQLNESIIVALFQGQF-------KSTVQCL----------------TCHKKSRTF 840
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR----- 405
+ L LP K ++ + L+ F E +T+ R + + R R
Sbjct: 841 EAFMYLSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRARRDSLK 890
Query: 406 ---VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKY 462
+ +LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK N K KY
Sbjct: 891 KIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNNLK---KY 945
Query: 463 DLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+L + H G +GG Y + + + + W
Sbjct: 946 NLFSVSNHYGGLDGGHYTAYCKNAARQRW 974
>gi|380013085|ref|XP_003690600.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Apis
florea]
Length = 542
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 129/331 (38%), Gaps = 57/331 (17%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHR-------- 236
VGL N+ T F+NV +QS ++ + IP + P HR
Sbjct: 187 VGLRNLGNTCFMNVVLQSFNNISHFCEYLTQMPCLEGIPFD-----EPPTHRGRIVTPGR 241
Query: 237 ---------FGDLTRKIWHARNFKGQ----VSPHEFLQAVMKASKKRFRIGVQSNPVEFM 283
+ RK+ N G +SP E L V+ RFR Q + EF+
Sbjct: 242 AKEFMSDALLAEELRKVLLGLNLGGSNGQAISP-ECLFLVIWKVVPRFRGYQQQDAHEFL 300
Query: 284 SWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNI 343
+++L+ LH++L +G+ +V + T+ +D
Sbjct: 301 TYMLDRLHTELLQLLPRLGHEPLGLRGKQSIVTAVFGGTLLSVVHCMNCRTDS------- 353
Query: 344 TTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE--------VV 395
+ PF L LD+P L + E+ + + +++ + F E + + +
Sbjct: 354 ---KTHEPFQDLSLDIPDR-LQRRTKEQEEVCSLT-YSLTRFFKVEELADSELYFCDNCM 408
Query: 396 RPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYI--PLPTPK 453
+ R+ + RLP + LH++RF N + K T V+FP+K+L++ + + K
Sbjct: 409 GKQRSTKRFWIHRLPNVLCLHIKRFRWCNSYRSKVDTQVDFPMKSLDMSAFTVRGVNGTK 468
Query: 454 ENEKLRSKYDLIANIVHDGKPEG-GFYRVFV 483
YDL A IVH G G G Y F
Sbjct: 469 LGASNSHLYDLAAVIVHHGSGAGTGHYTAFA 499
>gi|410961241|ref|XP_003987192.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Felis
catus]
Length = 1087
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 151/390 (38%), Gaps = 117/390 (30%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI S IR++ GL N+ T ++N +Q L
Sbjct: 711 RENKPTCYPKA-EITRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 769
Query: 216 LRNFFLIPENYRHC-------------KSPLVHRFGDLTRKIWHARNFKGQ---VSPHEF 259
L ++F R+C K + FG + + +W GQ +SP +F
Sbjct: 770 LADYF-----NRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDF 819
Query: 260 LQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL------------------------- 294
+ K + + F Q + E + +L++ LH DL
Sbjct: 820 KITIGKINDQ-FAGYSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEH 878
Query: 295 ---RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITT-ETSRM 350
++ + N SII FQG+ K+T+ +T + SR
Sbjct: 879 AWQKHKQLNESIIVALFQGQF-------KSTVQC-----------------LTCHKKSRT 914
Query: 351 PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR---- 405
+ L LP K ++ + L+ F E +T+ R + + R R
Sbjct: 915 FEAFMYLSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRTRRDSL 964
Query: 406 ----VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSK 461
+ +LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK N K K
Sbjct: 965 KKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNNLK---K 1019
Query: 462 YDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+L + H G +GG Y + + + + W
Sbjct: 1020 YNLFSVSNHYGGLDGGHYTAYCKNAARQRW 1049
>gi|327288428|ref|XP_003228928.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Anolis
carolinensis]
Length = 1066
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 140/347 (40%), Gaps = 90/347 (25%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPL-----RNFFLIP---ENYRHCKSPLVHRFGDLTRK 243
GL N+ T ++N +Q L L RN++ + N+ K + FG + +
Sbjct: 725 TGLRNLGNTCYMNSILQCLCNAPHLADYFNRNYYQVDINRSNFLGHKGEVAEEFGIIMKA 784
Query: 244 IWHARNFKGQ---VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL------ 294
+W GQ +SP +F + K + +F Q + E + +L++ LH DL
Sbjct: 785 LW-----AGQYRYISPKDFKMTIGKIND-QFAGYSQQDSQELLLFLMDDLHEDLNKADNR 838
Query: 295 ----------------------RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEK 332
++ + N SII FQG+ K+T+
Sbjct: 839 KRYKEENNDDLDDPKAADLAWHKHKQLNESIIVALFQGQF-------KSTVQCL------ 885
Query: 333 GSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVT 392
+ SR + L LP K +++ F + K E +T
Sbjct: 886 ----------TCHKKSRTFEAFMYLSLPLASTSKCTLQE-------CFRLFSK--EEKLT 926
Query: 393 EVVRPHVARMRYR--------VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELK 444
+ R + + + R + +LP +++H++RF+ + + +K T V+FP+++L++
Sbjct: 927 DNNRFYCSHCKTRRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLESLDVS 986
Query: 445 DYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+ PK N K +Y+L A H G +GG Y + + +++ W
Sbjct: 987 QYV--IGPKSNSK---RYNLFAVSNHYGGLDGGHYTAYCKNATKQRW 1028
>gi|347968815|ref|XP_312004.5| AGAP002900-PA [Anopheles gambiae str. PEST]
gi|333467828|gb|EAA08027.5| AGAP002900-PA [Anopheles gambiae str. PEST]
Length = 901
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 130/327 (39%), Gaps = 51/327 (15%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRH------CKSPLVHRFGDLTRKIW 245
GL N+ T ++N +Q L L FF P H + + + + +W
Sbjct: 561 TGLKNLGNTCYMNSILQCLSNTHFLNEFFHDPSFKMHLNRNNKTQGKIGEEVAAVIKALW 620
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSII- 304
+ +K S + L+ V+ +++F Q + EF++ L++ LHSDL+ + S +
Sbjct: 621 TGQ-YKCIASKN--LRYVVGQYERQFGGIEQQDSHEFLTILMDWLHSDLQTKQMQVSALD 677
Query: 305 ---------YECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLML 355
E F+G+ + E+ G ++T K + H T S F L
Sbjct: 678 QLPPSEKAWIEHFKGKDSYISEL----FYGQIKSTVKCTRC---HKESATYES---FSNL 727
Query: 356 GLDLPPPPLFKDVMEKNIIPQVPLFNILKK-FDGETVTEVVRPHV-----ARMRYRVTRL 409
L+LP + NI L N L F+GE V P A + ++RL
Sbjct: 728 SLELP--------QDSNI---CYLENCLDMYFNGEEVRGWHCPKCKSNQDAIKKLDISRL 776
Query: 410 PKYMILHMRRFTKN----NFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRS-KYDL 464
P +++H +RF + K TLV FP+ L + Y+ N++L + +Y L
Sbjct: 777 PSILVVHFKRFYADPDTMATVYRKKQTLVKFPLSELNMTRYLARTEVNRNKRLTTFRYHL 836
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
H G E G Y F + W
Sbjct: 837 YGVSNHYGSMESGHYTAFCLNNIHQKW 863
>gi|403297385|ref|XP_003939546.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11 [Saimiri
boliviensis boliviensis]
Length = 923
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 398 HVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEK 457
+A + + LP+ +I+H++RF+ F EK TLV FP+++L+ +++ P + N +
Sbjct: 769 QLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVIKPQNESNPE 828
Query: 458 LRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
L KYDLIA H G G Y F K W
Sbjct: 829 L-YKYDLIAVSNHYGGMRDGHYTTFACNKDSGQW 861
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 84/204 (41%), Gaps = 24/204 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPE-NYRH---CKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L V L +FL + E N+R+ K + + DL ++
Sbjct: 269 CGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQ 328
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
W + + PH F V + + F Q + E +S+LL+ LH DL KK +
Sbjct: 329 AWSGHH--RSIVPHVFKNKVGHFASQ-FLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYV 385
Query: 304 IYECFQG--ELEVVKEIPKNTISGND-------QNTEKGSDGGDDHDNITTETSRMPFLM 354
G + EV +E +N ND K + D N++ PF
Sbjct: 386 ELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFD--PFCY 443
Query: 355 LGLDLPPPPLFKDVMEKNIIPQVP 378
L +P P K V+E IP P
Sbjct: 444 LS--VPLPISHKRVLEVFFIPMDP 465
>gi|432892779|ref|XP_004075833.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Oryzias
latipes]
Length = 667
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 132/333 (39%), Gaps = 63/333 (18%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRKI 244
VGL + F+N +Q L LR++ L + N R + L+ F L + +
Sbjct: 331 VGLIINQAKCFMNSILQCLSNTQSLRDYCLHNLHRRDLNNNSR-TNTALMEEFAKLIQTL 389
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSII 304
W + VSP EF + + + RF Q + EF+ +LL+ LH+
Sbjct: 390 W-TSSSSEAVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHN------------ 435
Query: 305 YECFQGELEVVKEIPKNTISGND--QNTEKGSDGGDDHDNITTETSRMPFLMLG------ 356
E+ V P+ T D Q+ EKG + + E S++ L +G
Sbjct: 436 ------EVNRVSVRPRGTAEDFDHLQDEEKGKKMWSKY--VEREDSKIVDLFVGQLKSSL 487
Query: 357 ---------------LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVAR 401
DL P K E +++ + LF DG+ R R
Sbjct: 488 TCSHCGFCSTVFDPFWDLSLPISKKSYGEVSLMDCMRLFTKEDVLDGDEKPTCYRCKARR 547
Query: 402 M---RYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKL 458
++R+ + PK ++LH++RF++ K T VNFP+K+L+L+++
Sbjct: 548 RCTKKFRIQKFPKILVLHLKRFSEAR-RTSKLSTFVNFPLKDLDLREFA------SGNST 600
Query: 459 RSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+ Y+L A H G GG Y + + + W
Sbjct: 601 NAMYNLYAVSNHSGTTMGGHYTAYCRNPNSGEW 633
>gi|388581444|gb|EIM21752.1| cysteine proteinase, partial [Wallemia sebi CBS 633.66]
Length = 454
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 111/308 (36%), Gaps = 87/308 (28%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFF--------LIPENYRHCKSPLVHRFGDLTRK 243
GL N+ T ++N T+Q L P FF + N + L F +
Sbjct: 139 TGLKNLGNTCYMNSTLQCLSATIPFARFFTSGVWRRFVNHNNKMGMQGRLAESFSQILTH 198
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGV-QSNPVEFMSWLLNTLHSDL-------- 294
+W R +SP F + + + + IG Q + EF+S+LL+ LH DL
Sbjct: 199 MW--REQYTFISPMTFRKNICTFANQF--IGTDQHDAQEFLSFLLDGLHEDLMVGEGQKP 254
Query: 295 -----------------------RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTE 331
R + N S+I + FQG+ E
Sbjct: 255 TEDTNNDALESLPTPLGSEREWKRYKQMNDSVIVDYFQGQFRNRMEC------------- 301
Query: 332 KGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETV 391
H TT S F+ L L +P K + V L L F + V
Sbjct: 302 -----MSCHKTSTTYNS---FMYLSLPVP---------TKKLKGSVSLTTCLDSFLKDEV 344
Query: 392 TE-----------VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKN 440
E V R + R+ + RLP +++ ++RF+ N F +K TLV +P+KN
Sbjct: 345 MEKDNAWNCPNCKVARKSIKRLS--IARLPPILLIQLKRFSFNGPFSDKIETLVTYPLKN 402
Query: 441 LELKDYIP 448
L Y P
Sbjct: 403 FNLTPYTP 410
>gi|55727816|emb|CAH90661.1| hypothetical protein [Pongo abelii]
Length = 931
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 398 HVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEK 457
+A + + LP+ +I+H++RF+ F EK TLV FP+++L+ +++ P N +
Sbjct: 777 QLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVIQPQNDSNPE 836
Query: 458 LRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
L KYDLIA H G G Y F K W
Sbjct: 837 LY-KYDLIAVSNHYGGMRDGHYTTFACNKDSGQW 869
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 84/204 (41%), Gaps = 24/204 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPE-NYRH---CKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L V L +FL + E N+R+ K + + DL ++
Sbjct: 277 CGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQ 336
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
W + + PH F V + + F Q + E +S+LL+ LH DL KK +
Sbjct: 337 AWSGHH--RSIVPHVFKNKVGHFASQ-FLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYV 393
Query: 304 IYECFQG--ELEVVKEIPKNTISGND-------QNTEKGSDGGDDHDNITTETSRMPFLM 354
G + EV +E +N ND K + D N++ PF
Sbjct: 394 ELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFD--PFCY 451
Query: 355 LGLDLPPPPLFKDVMEKNIIPQVP 378
L +P P K V+E IP P
Sbjct: 452 LS--VPLPISHKRVLEVFFIPMDP 473
>gi|354489521|ref|XP_003506910.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like
[Cricetulus griseus]
Length = 565
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 129/338 (38%), Gaps = 68/338 (20%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 211 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 268
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 269 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 326
Query: 303 IIYECFQGELEVVKEIPKNTISGNDQNTE-KGSDGGDDHDNIT------TETSRMPFLML 355
I+ +P G + E + SD DD N+ E S++ L +
Sbjct: 327 IL---------ASGPVPSPPRRGGALHEEPELSD--DDRANLMWKRYLEREDSKIVDLFV 375
Query: 356 G-----------------------LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVT 392
G L LP P + ++ LF ++ + E
Sbjct: 376 GQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEELESENAP 435
Query: 393 EVVRPHVARMRYRVT------RLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDY 446
R R + R T R P+ ++LH+ RF+ + ++K+ V+FP++ L L D+
Sbjct: 436 VCDR---CRQKTRSTKKLTVQRFPRILVLHLNRFSTSRGSIKKSSVGVDFPLQRLSLGDF 492
Query: 447 IPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQ 484
++ Y L A H G G Y +
Sbjct: 493 ------ASDKAGSPVYQLYALCNHSGSVHYGHYTALCR 524
>gi|223029565|gb|ACM78504.1| MIP03335p [Drosophila melanogaster]
Length = 367
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 138/320 (43%), Gaps = 44/320 (13%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKS-------PLVHRFGDLTRKIW 245
GL N+ T ++N +Q L TP + I + Y++ S ++ L +++W
Sbjct: 35 GLKNLGNTCYMNSILQCLSN-TPQLTEYCISDKYKNYISRSNKTNGQVIEEVAALIKELW 93
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR--NTKKNTSI 303
+ + +K S L+ V+ +K FR Q + EF++ L++ LHSDL+ + + +
Sbjct: 94 NGQ-YKCVASRD--LRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHSDLQTLHVPRQREM 150
Query: 304 IYECFQGELEVVK---EIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLP 360
I + LE K + + G ++T K ++ T E+ F L L+LP
Sbjct: 151 ISASEKAWLEFTKAKESMILHLFYGQMKSTVKCV--ACHKESATYES----FSNLSLELP 204
Query: 361 PPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHV-----ARMRYRVTRLPKYMIL 415
P +V + N + F GE + P A + +++LP +++
Sbjct: 205 PN---SNVCQLNQCMDM-------YFSGERIHGWNCPSCKTKRDAIKKLDISKLPPVLVV 254
Query: 416 HMRRFT---KNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSK-YDLIANIVHD 471
H++RF N+ K + FP++NL++ YI E+ + K Y L A H
Sbjct: 255 HLKRFYADPSNSGLYMKKQNYLRFPLENLDMNPYI---ARAESRAVTPKTYQLYAVSNHY 311
Query: 472 GKPEGGFYRVFVQRKSEELW 491
G EGG Y F + + W
Sbjct: 312 GTMEGGHYTAFCKSANYGKW 331
>gi|194764571|ref|XP_001964402.1| GF23156 [Drosophila ananassae]
gi|190614674|gb|EDV30198.1| GF23156 [Drosophila ananassae]
Length = 899
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 131/340 (38%), Gaps = 82/340 (24%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKS-------PLVHRFGDLTRKI 244
GL N+ T ++N +Q L TP + I + Y+ S ++ L +++
Sbjct: 566 TGLKNLGNTCYMNSILQCLSN-TPQLTEYCISDKYKSYISRSNRTNGQVIEEVAALIKEL 624
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRN-------- 296
W+ + +K S L+ V+ +K FR Q + EF++ L++ LHSDL+
Sbjct: 625 WNGQ-YKCVASRD--LRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHSDLQTLHVARQRE 681
Query: 297 ------------TKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNIT 344
TK S+I F G++ K+T+ N E T
Sbjct: 682 TISASEKAWLEFTKAKESMILHLFYGQI-------KSTVKCVACNKESA----------T 724
Query: 345 TETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHV----- 399
E F L L+LPP N+ ++ F GE + P+
Sbjct: 725 YEC----FSNLSLELPP--------NSNVCQLNQCMDMY--FSGERIQGWNCPNCNTKRD 770
Query: 400 ARMRYRVTRLPKYMILHMRRFTK---NNFFVEKNPTLVNFPVKNLELKDYIPLP-----T 451
A + +++LP +++H++RF N K + FP+ NLE+ YI T
Sbjct: 771 AIKKLDISKLPPVLVVHLKRFYADPGNTGAYIKKQNYLRFPLDNLEMTPYIARAESRAVT 830
Query: 452 PKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
PK Y L A H G EGG Y F + + W
Sbjct: 831 PK-------TYQLYAVSNHYGTMEGGHYTAFCKSANYGRW 863
>gi|297709837|ref|XP_002831614.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 11 [Pongo abelii]
Length = 934
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 398 HVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEK 457
+A + + LP+ +I+H++RF+ F EK TLV FP+++L+ +++ P N +
Sbjct: 779 QLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVIQPQNDSNPE 838
Query: 458 LRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
L KYDLIA H G G Y F K W
Sbjct: 839 LY-KYDLIAVSNHYGGMRDGHYTTFACFKGSGQW 871
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 86/206 (41%), Gaps = 28/206 (13%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPE-NYRH---CKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L V L +FL + E N+R+ K + + DL ++
Sbjct: 309 CGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQ 368
Query: 244 IW--HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNT 301
W H R+ + PH F V + + F Q + E +S+LL+ LH DL KK
Sbjct: 369 AWSGHHRS----IVPHVFKNKVGHFASQ-FLGYQQHDSQELLSFLLDGLHEDLNRVKKKE 423
Query: 302 SIIYECFQG--ELEVVKEIPKNTISGND-------QNTEKGSDGGDDHDNITTETSRMPF 352
+ G + EV +E +N ND K + D N++ PF
Sbjct: 424 YVELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFD--PF 481
Query: 353 LMLGLDLPPPPLFKDVMEKNIIPQVP 378
L +P P K V+E IP P
Sbjct: 482 CY--LSVPLPISHKRVLEVFFIPMDP 505
>gi|432118440|gb|ELK38094.1| Ubiquitin carboxyl-terminal hydrolase 11 [Myotis davidii]
Length = 379
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 24/158 (15%)
Query: 334 SDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE 393
S+G D N+ +T P++ + D P K K++ E E
Sbjct: 185 SNGTSDRSNLNEDTQAQPYIAIDWD----PEMK-----------------KRYYNEV--E 221
Query: 394 VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPK 453
+ +A + + LP+ +I+H++RF+ F EK TLV FP+++L+ +++ P +
Sbjct: 222 AEQHQLATKKLDLWALPETLIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVIKPQDE 281
Query: 454 ENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+L KYDLIA H G G Y F K W
Sbjct: 282 SAPELY-KYDLIAVSNHYGGLRDGHYTTFACNKDSGQW 318
>gi|410979290|ref|XP_003996018.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Felis catus]
Length = 913
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 97/243 (39%), Gaps = 54/243 (22%)
Query: 105 CPYLDT---VNRQVLDFDFEKFC-SVSLSNLNVYACLVCGKYYQGRGQK--SHAYTHSLE 158
CP+LD+ V ++ L F + C S ++ N++ACL Y G G+ H+ H+
Sbjct: 8 CPHLDSIGEVTKEDLLFKSKGACQSCGVTGPNLWACLQVSCSYVGCGESFADHSTIHAQA 67
Query: 159 AGHHVYINLRTEKVYCLPDGYEI-------------------NDPSL------------- 186
H++ +NL T +V+C E+ DP L
Sbjct: 68 KKHNLTVNLTTFRVWCYACEKEVFLKQRLAAPLAGPSPKFSEQDPPLPSHPLKAVPIAVA 127
Query: 187 ---------EDIRH---VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY-RHCKSP- 232
+D++ G+ N+ + ++N +Q+L PL FFL R K P
Sbjct: 128 DEGESESEDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKPA 187
Query: 233 LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHS 292
L + L ++WH R V P + K FR Q + EF+ L++ LH
Sbjct: 188 LCKSYQKLVSEVWH-RKRPSYVVPTSLSHGI-KLVNPMFRGYAQQDTQEFLRCLMDQLHE 245
Query: 293 DLR 295
+L+
Sbjct: 246 ELK 248
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V RLP+ + +H++RF + K + V+FP++ L+L+ ++ KE + YDL
Sbjct: 573 KVLRLPEILCIHLKRFRHEVMYSFKISSHVSFPLEGLDLRPFL----AKECTSQITTYDL 628
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + Q W
Sbjct: 629 LSVICHHGTAGSGHYIAYCQNVINGQW 655
>gi|410961243|ref|XP_003987193.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Felis
catus]
Length = 1010
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 151/390 (38%), Gaps = 117/390 (30%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI S IR++ GL N+ T ++N +Q L
Sbjct: 634 RENKPTCYPKA-EITRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 692
Query: 216 LRNFFLIPENYRHC-------------KSPLVHRFGDLTRKIWHARNFKGQ---VSPHEF 259
L ++F R+C K + FG + + +W GQ +SP +F
Sbjct: 693 LADYF-----NRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDF 742
Query: 260 LQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL------------------------- 294
+ K + +F Q + E + +L++ LH DL
Sbjct: 743 KITIGKIND-QFAGYSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEH 801
Query: 295 ---RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITT-ETSRM 350
++ + N SII FQG+ K+T+ +T + SR
Sbjct: 802 AWQKHKQLNESIIVALFQGQF-------KSTVQC-----------------LTCHKKSRT 837
Query: 351 PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR---- 405
+ L LP K ++ + L+ F E +T+ R + + R R
Sbjct: 838 FEAFMYLSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRTRRDSL 887
Query: 406 ----VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSK 461
+ +LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK N K K
Sbjct: 888 KKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNNLK---K 942
Query: 462 YDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+L + H G +GG Y + + + + W
Sbjct: 943 YNLFSVSNHYGGLDGGHYTAYCKNAARQRW 972
>gi|55728896|emb|CAH91186.1| hypothetical protein [Pongo abelii]
Length = 920
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 398 HVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEK 457
+A + + LP+ +I+H++RF+ F EK TLV FP+++L+ +++ P N +
Sbjct: 766 QLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVIQPQNDSNPE 825
Query: 458 LRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
L KYDLIA H G G Y F K W
Sbjct: 826 LY-KYDLIAVSNHYGGMRDGHYTTFACNKDSGQW 858
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 84/204 (41%), Gaps = 24/204 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPE-NYRH---CKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L V L +FL + E N+R+ K + + DL ++
Sbjct: 266 CGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQ 325
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
W + + PH F V + + F Q + E +S+LL+ LH DL KK +
Sbjct: 326 AWSGHH--RSIVPHVFKNKVGHFASQ-FLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYV 382
Query: 304 IYECFQG--ELEVVKEIPKNTISGND-------QNTEKGSDGGDDHDNITTETSRMPFLM 354
G + EV +E +N ND K + D N++ PF
Sbjct: 383 ELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFD--PFCY 440
Query: 355 LGLDLPPPPLFKDVMEKNIIPQVP 378
L +P P K V+E IP P
Sbjct: 441 LS--VPLPISHKRVLEVFFIPMDP 462
>gi|391331221|ref|XP_003740048.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like
[Metaseiulus occidentalis]
Length = 908
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 400 ARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLR 459
A R+ + LP +I+H++RF+ N +F EK +VNFPVK+L + ++ P K
Sbjct: 737 ATKRFNLWSLPPILIIHLKRFSFNRYFREKLDVVVNFPVKDLSMGKWVLDPKHKS----- 791
Query: 460 SKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
YDLI H G G Y + + K + W
Sbjct: 792 VPYDLIGVANHTGNLGAGHYTAYAKNKITKKW 823
>gi|334350493|ref|XP_001371319.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11-like
[Monodelphis domestica]
Length = 993
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 396 RPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKEN 455
R +A + + LP+ +I+H++RF+ F EK TLV FP+++L+ +++ P E
Sbjct: 834 RHQLATKKLDLWALPEALIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFLIKPR-SEA 892
Query: 456 EKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+ KYDLIA H G G Y F + K W
Sbjct: 893 DPAPCKYDLIAVSNHYGGLRDGHYTTFARNKDSGQW 928
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 73/186 (39%), Gaps = 22/186 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL---IPENYRHC-----KSPLVHRFGDLTRK 243
GL N+ T F+N +Q L V PL +FL + C K + + DL ++
Sbjct: 353 CGLTNLGNTCFMNSALQCLSNVPPLTEYFLHNHYLKELNFCNPLGMKGEIAEAYADLVKQ 412
Query: 244 IW--HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNT 301
W H R+ V P F V + + F Q + E +S+LL+ LH DL KK
Sbjct: 413 AWSGHHRS----VVPRMFKTKVGHFASQ-FLGYQQHDSQELLSFLLDGLHEDLNRVKKKE 467
Query: 302 SIIYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLM 354
+ G + EV E +N ND G + E ++ PF
Sbjct: 468 YVELRDAAGRPDQEVADEAWRNHKRRNDSVIVDTFHGLFKSTLVCPECGKVSVTFDPFCY 527
Query: 355 LGLDLP 360
L + LP
Sbjct: 528 LSVPLP 533
>gi|224088124|ref|XP_002308332.1| predicted protein [Populus trichocarpa]
gi|222854308|gb|EEE91855.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 79/182 (43%), Gaps = 17/182 (9%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLI-------PENYRHCKSPLVHRFGDLTRKIW 245
GL N+ T F+N IQ L L ++FL EN K L FGDL K+W
Sbjct: 33 GLQNLGNTCFMNSAIQCLAHTPKLVDYFLGDYGKEINQENLLGTKGELALAFGDLLSKLW 92
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIY 305
R+ V+P F + + + + F Q + EF+S+LL+ LH DL K I
Sbjct: 93 TPRD--TPVAPAIFKRKLADFAPQ-FSGYNQHDSQEFLSFLLDGLHEDLNRVKSKPYIAI 149
Query: 306 ECFQGELE--VVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLGLD 358
+ +G L+ V +E +N ++ ND G + ++ PF+ L L
Sbjct: 150 KDAEGRLDEVVAEEYWRNHLARNDSIIVDLCQGQYQSTLVCPACNKKSVTFDPFMYLSLP 209
Query: 359 LP 360
LP
Sbjct: 210 LP 211
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 396 RPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKEN 455
+P AR + + RLP+ +++H++RF+ + + K T V+FP+ + +L Y T K++
Sbjct: 509 KPRQARKKLDLWRLPEILVVHLKRFSYSRYIRNKLETYVDFPIDDFDLSTY----TSKKD 564
Query: 456 EKLRSKYDLIANIVHDGKPEGGFYRVFV 483
+ + Y L A H G G Y F+
Sbjct: 565 SQFSNHYVLYAISNHHGGMGCGHYDAFI 592
>gi|57108191|ref|XP_535474.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Canis
lupus familiaris]
Length = 1116
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 151/390 (38%), Gaps = 117/390 (30%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI S IR++ GL N+ T ++N +Q L
Sbjct: 740 RENKPTCYPKA-EITRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 798
Query: 216 LRNFFLIPENYRHC-------------KSPLVHRFGDLTRKIWHARNFKGQ---VSPHEF 259
L ++F R+C K + FG + + +W GQ +SP +F
Sbjct: 799 LADYF-----NRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDF 848
Query: 260 LQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL------------------------- 294
+ K + +F Q + E + +L++ LH DL
Sbjct: 849 KITIGKIND-QFAGYSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEH 907
Query: 295 ---RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITT-ETSRM 350
++ + N SII FQG+ K+T+ +T + SR
Sbjct: 908 AWQKHKQLNESIIVALFQGQF-------KSTVQC-----------------LTCHKKSRT 943
Query: 351 PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR---- 405
+ L LP K ++ + L+ F E +T+ R + + R R
Sbjct: 944 FEAFMYLSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRTRRDSL 993
Query: 406 ----VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSK 461
+ +LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK N K K
Sbjct: 994 KKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNNLK---K 1048
Query: 462 YDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+L + H G +GG Y + + + + W
Sbjct: 1049 YNLFSVSNHYGGLDGGHYTAYCKNAARQRW 1078
>gi|301770085|ref|XP_002920464.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Ailuropoda
melanoleuca]
gi|281341524|gb|EFB17108.1| hypothetical protein PANDA_009195 [Ailuropoda melanoleuca]
Length = 1116
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 151/390 (38%), Gaps = 117/390 (30%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI S IR++ GL N+ T ++N +Q L
Sbjct: 740 RENKPTCYPKA-EITRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 798
Query: 216 LRNFFLIPENYRHC-------------KSPLVHRFGDLTRKIWHARNFKGQ---VSPHEF 259
L ++F R+C K + FG + + +W GQ +SP +F
Sbjct: 799 LADYF-----NRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDF 848
Query: 260 LQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL------------------------- 294
+ K + + F Q + E + +L++ LH DL
Sbjct: 849 KITIGKINDQ-FAGYSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEH 907
Query: 295 ---RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITT-ETSRM 350
++ + N SII FQG+ K+T+ +T + SR
Sbjct: 908 AWQKHKQLNESIIVALFQGQF-------KSTVQC-----------------LTCHKKSRT 943
Query: 351 PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR---- 405
+ L LP K ++ + L+ F E +T+ R + + R R
Sbjct: 944 FEAFMYLSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRTRRDSL 993
Query: 406 ----VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSK 461
+ +LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK N K K
Sbjct: 994 KKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNNLK---K 1048
Query: 462 YDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+L + H G +GG Y + + + + W
Sbjct: 1049 YNLFSVSNHYGGLDGGHYTAYCKNAARQRW 1078
>gi|345794939|ref|XP_003433957.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Canis lupus
familiaris]
Length = 1010
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 151/390 (38%), Gaps = 117/390 (30%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI S IR++ GL N+ T ++N +Q L
Sbjct: 634 RENKPTCYPKA-EITRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 692
Query: 216 LRNFFLIPENYRHC-------------KSPLVHRFGDLTRKIWHARNFKGQ---VSPHEF 259
L ++F R+C K + FG + + +W GQ +SP +F
Sbjct: 693 LADYF-----NRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDF 742
Query: 260 LQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL------------------------- 294
+ K + +F Q + E + +L++ LH DL
Sbjct: 743 KITIGKIND-QFAGYSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEH 801
Query: 295 ---RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITT-ETSRM 350
++ + N SII FQG+ K+T+ +T + SR
Sbjct: 802 AWQKHKQLNESIIVALFQGQF-------KSTVQC-----------------LTCHKKSRT 837
Query: 351 PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR---- 405
+ L LP K ++ + L+ F E +T+ R + + R R
Sbjct: 838 FEAFMYLSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRTRRDSL 887
Query: 406 ----VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSK 461
+ +LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK N K K
Sbjct: 888 KKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNNLK---K 942
Query: 462 YDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
Y+L + H G +GG Y + + + + W
Sbjct: 943 YNLFSVSNHYGGLDGGHYTAYCKNAARQRW 972
>gi|74218724|dbj|BAE25218.1| unnamed protein product [Mus musculus]
Length = 988
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 149/389 (38%), Gaps = 115/389 (29%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI+ S IR++ GL N+ T ++N +Q L
Sbjct: 612 RENKPPCYPKA-EISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 670
Query: 216 LRNFFLIPENYRHC-------------KSPLVHRFGDLTRKIWHARNFKGQ---VSPHEF 259
L ++F R+C K + FG + + +W GQ +SP +F
Sbjct: 671 LADYF-----NRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDF 720
Query: 260 LQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL------------------------- 294
+ K + + F Q + E + +L++ LH DL
Sbjct: 721 KVTIGKINDQ-FAGSSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNEHLDDLQAAEH 779
Query: 295 ---RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMP 351
++ + N SII FQG+ K+T+ SR
Sbjct: 780 AWQKHKQLNESIIVALFQGQF-------KSTVQCL----------------TCRRRSRTF 816
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR----- 405
+ L LP K ++ + L+ F E +T+ R + + R R
Sbjct: 817 EAFMYLSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRARRDSLK 866
Query: 406 ---VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKY 462
+ +LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK + K KY
Sbjct: 867 KIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNSLK---KY 921
Query: 463 DLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+L + H G +GG Y + + + + W
Sbjct: 922 NLFSVSNHYGGLDGGHYTAYCKNAARQRW 950
>gi|148696218|gb|EDL28165.1| ubiquitin specific peptidase 8, isoform CRA_c [Mus musculus]
Length = 1080
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 149/389 (38%), Gaps = 115/389 (29%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI+ S IR++ GL N+ T ++N +Q L
Sbjct: 704 RENKPPCYPKA-EISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 762
Query: 216 LRNFFLIPENYRHC-------------KSPLVHRFGDLTRKIWHARNFKGQ---VSPHEF 259
L ++F R+C K + FG + + +W GQ +SP +F
Sbjct: 763 LADYF-----NRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDF 812
Query: 260 LQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL------------------------- 294
+ K + + F Q + E + +L++ LH DL
Sbjct: 813 KVTIGKINDQ-FAGSSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNEHLDDLQAAEH 871
Query: 295 ---RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMP 351
++ + N SII FQG+ K+T+ SR
Sbjct: 872 AWQKHKQLNESIIVALFQGQF-------KSTVQCL----------------TCRRRSRTF 908
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR----- 405
+ L LP K ++ + L+ F E +T+ R + + R R
Sbjct: 909 EAFMYLSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRARRDSLK 958
Query: 406 ---VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKY 462
+ +LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK + K KY
Sbjct: 959 KIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNSLK---KY 1013
Query: 463 DLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+L + H G +GG Y + + + + W
Sbjct: 1014 NLFSVSNHYGGLDGGHYTAYCKNAARQRW 1042
>gi|195498419|ref|XP_002096515.1| GE25711 [Drosophila yakuba]
gi|194182616|gb|EDW96227.1| GE25711 [Drosophila yakuba]
Length = 895
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 130/340 (38%), Gaps = 82/340 (24%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKS-------PLVHRFGDLTRKI 244
GL N+ T ++N +Q L TP + I + Y++ S ++ L +++
Sbjct: 562 TGLKNLGNTCYMNSILQCLSN-TPQLTEYCISDKYKNYISRSNKTNGQVIEEVAALIKEL 620
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRN-------- 296
W N + + L+ V+ +K FR Q + EF++ L++ LHSDL+
Sbjct: 621 W---NGQYKCVASRDLRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHSDLQTLHVPRQRE 677
Query: 297 ------------TKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNIT 344
TK S+I F G++ K K + + T +
Sbjct: 678 MISASEKAWLEFTKAKESMILHLFYGQM---KSTVKCVVCHKESATYES----------- 723
Query: 345 TETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHV----- 399
F L L+LPP N+ ++ F GE + P+
Sbjct: 724 -------FSNLSLELPP--------NSNVCQLNQCMDMY--FSGERIHGWNCPNCKTKRD 766
Query: 400 ARMRYRVTRLPKYMILHMRRF---TKNNFFVEKNPTLVNFPVKNLELKDYIPLP-----T 451
A + +++LP M++H++RF N+ K + FP++NL++ YI T
Sbjct: 767 AIKKLDISKLPPVMVVHLKRFYADPSNSGAYMKKQNYLRFPLENLDMNPYIARAESRAVT 826
Query: 452 PKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
PK Y L A H G EGG Y F + + W
Sbjct: 827 PK-------TYQLYAVSNHYGTMEGGHYTAFCKSANYGKW 859
>gi|118399164|ref|XP_001031908.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila]
gi|89286243|gb|EAR84245.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila SB210]
Length = 680
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 145/358 (40%), Gaps = 76/358 (21%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP--------ENYRHCKSPLVHRFGDLTRK 243
VGL+N+ T F+N +Q L V PL ++FL +++ + + +F +L
Sbjct: 84 VGLSNLGNTCFMNSALQCLSNVPPLCDYFLSKLHEKEINYDSFLGSQGKITQQFAELMID 143
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH--SDLRNT-KKN 300
+W+ + + P +FL+A+ +F G Q + EF+++L++ LH S L N ++N
Sbjct: 144 MWNTSD--SYIIPQKFLRAIGNFG-PQFADGSQQDSHEFLAFLMDILHEVSQLTNQLQQN 200
Query: 301 TSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSR----------- 349
+E ++ +L VK+ P I G D N G+D++ E +
Sbjct: 201 KQNFFEIYK-DLNRVKQKP--YIEGKDYN-------GNDYEKYAKECWKEYLMRNRSIIV 250
Query: 350 -----------------------MPFLMLGLDLPPPPLFKDVMEKNIIPQ----VPLFNI 382
F+ L + +P K + K I + L
Sbjct: 251 DLFQGQTKSTLRCLKCNTVSHKFETFMYLSVPIPDSQKSKKLSSKRSIEEDSESFSLQRC 310
Query: 383 LKKFDGETVTE---------VVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTL 433
+++F E E + + + + ++P +I+H++RF N K
Sbjct: 311 IQEFTKEEKLERGELWFCPKCKKHQESTKKIDLWKMPNILIIHLKRFEFNKDRRCKLSNK 370
Query: 434 VNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
++FP+KN ++ L K+ + YDL A H G G Y + + + ++ W
Sbjct: 371 IDFPIKNFDIS---SLTAGKQRD--IPIYDLFAVSNHGGTLSSGHYTSYAKNRIDQNW 423
>gi|351715023|gb|EHB17942.1| Ubiquitin carboxyl-terminal hydrolase 8 [Heterocephalus glaber]
Length = 1106
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 148/385 (38%), Gaps = 107/385 (27%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI+ S IR++ GL N+ T ++N +Q L
Sbjct: 730 RENKPTCCPKA-EISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 788
Query: 216 LRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ---VSPHEFLQAVM 264
L ++F + N K + FG + + +W GQ +SP +F +
Sbjct: 789 LADYFNRNYYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDFKITIG 843
Query: 265 KASKKRFRIGVQSNPVEFMSWLLNTLHSDL----------------------------RN 296
K + + F Q + E + +L++ LH DL ++
Sbjct: 844 KINDQ-FAGYSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEHAWQKH 902
Query: 297 TKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPF-LML 355
+ N SII FQG+ K+T+ +T F +
Sbjct: 903 KQLNESIIVALFQGQF-------KSTVQC-----------------LTCHRKSRTFEAFM 938
Query: 356 GLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR--------V 406
L LP K ++ + L+ F E +T+ R + + R R +
Sbjct: 939 YLSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEI 988
Query: 407 TRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIA 466
+LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK + K KY L +
Sbjct: 989 WKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKHSLK---KYSLFS 1043
Query: 467 NIVHDGKPEGGFYRVFVQRKSEELW 491
H G +GG Y + + + + W
Sbjct: 1044 VSNHYGGLDGGHYTAYCKNAARQRW 1068
>gi|324503928|gb|ADY41696.1| Ubiquitin carboxyl-terminal hydrolase 8 [Ascaris suum]
Length = 939
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 129/329 (39%), Gaps = 47/329 (14%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFF-------LIPE-NYRHCKSPLVHRFGDLTR 242
+ GL N+ T F+N T+Q+L LR F L+ + N + F L
Sbjct: 599 YTGLYNLGNTCFMNSTLQALFNTHSLRCVFTRRRFAELVNQRNKMGTFGVISAAFSALMD 658
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTS 302
+W + P +FL+ Q + EF +LL+ LH D+ + S
Sbjct: 659 AVWSGA--YSAIRPLQFLETFASEVNASLADRRQHDAQEFQIYLLDALHEDMNRVHRPVS 716
Query: 303 I--------IYE---CFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMP 351
++E ++ + ++ P N I G Q + G ++T E
Sbjct: 717 FEQNYTGMNLFEEGADYEAKSKMFSSSPVNDIFGC-QTVSQLQCGTCQAQSVTFEE---- 771
Query: 352 FLMLGLDLPP--PPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTR- 408
L ++LP D ++ + P V DG + R+ RVTR
Sbjct: 772 VTQLSVELPTRGASTIIDCIKAHFKPVV--------LDGSCKWHCPKCKALRVATRVTRI 823
Query: 409 --LPKYMILHMRRFTKNNFFV---EKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSK-Y 462
LPK +++H++RF+ F V EKN L++F L++ + P +E RS+ +
Sbjct: 824 WKLPKVLVVHLKRFS---FVVDGWEKNDALIHFDCLPLDVSSVV-HPLIREKASPRSECF 879
Query: 463 DLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+L A H G+ G Y + + + W
Sbjct: 880 NLYAVTNHSGRLNSGHYTSVMHNEDTKEW 908
>gi|28972047|dbj|BAC65477.1| mKIAA0055 protein [Mus musculus]
Length = 1108
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 149/389 (38%), Gaps = 115/389 (29%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI+ S IR++ GL N+ T ++N +Q L
Sbjct: 732 RENKPPCYPKA-EISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 790
Query: 216 LRNFFLIPENYRHC-------------KSPLVHRFGDLTRKIWHARNFKGQ---VSPHEF 259
L ++F R+C K + FG + + +W GQ +SP +F
Sbjct: 791 LADYF-----NRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDF 840
Query: 260 LQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL------------------------- 294
+ K + + F Q + E + +L++ LH DL
Sbjct: 841 KVTIGKINDQ-FAGSSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNEHLDDLQAAEH 899
Query: 295 ---RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMP 351
++ + N SII FQG+ K+T+ SR
Sbjct: 900 AWQKHKQLNESIIVALFQGQF-------KSTVQCL----------------TCRRRSRTF 936
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR----- 405
+ L LP K ++ + L+ F E +T+ R + + R R
Sbjct: 937 EAFMYLSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRARRDSLK 986
Query: 406 ---VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKY 462
+ +LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK + K KY
Sbjct: 987 KIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNSLK---KY 1041
Query: 463 DLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+L + H G +GG Y + + + + W
Sbjct: 1042 NLFSVSNHYGGLDGGHYTAYCKNAARQRW 1070
>gi|380023879|ref|XP_003695737.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Apis
florea]
Length = 1001
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 128/315 (40%), Gaps = 30/315 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL--------IPENYRHCKSPLVHRFGDLTRK 243
GL N+ + ++N IQ L T L +F+ N + + +V + +
Sbjct: 666 TGLKNLGNSCYMNSIIQCLSNTTHLAKYFMDNLYADDLNINNDNNTQGQVVEEVAQVIKA 725
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK---N 300
+W + +K +SPH+ AV + K +F Q + EF+++LL+ +H+DL+ K
Sbjct: 726 LWRGQ-YKS-ISPHDLKIAVGQY-KLQFESYEQQDSHEFLTFLLDWMHNDLKKNCKVPLE 782
Query: 301 TSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLP 360
+I + + + + I + G ++T S T S L + L
Sbjct: 783 MTIAEKAWDKAMGSQRSIISDLFFGQLRSTITCSFCKQSSTTYETFNS----LTMSLLHS 838
Query: 361 PPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRF 420
D + K + Q K G + P A ++ +L +++H+ RF
Sbjct: 839 NRCTLNDCILKFVSGQ--------KVVGWKCPKCQTPREATKKFDFVKLAPIIVIHLNRF 890
Query: 421 TKNNFFVEKNPTLVNFPVKNLELKDYIPL---PTPKENEKLRSKYDLIANIV-HDGKPEG 476
++ ++EK T V+FP+ + LK Y+ T N + S + + H G EG
Sbjct: 891 AESGGWLEKRNTAVDFPLTDFNLKPYLVADNNSTAISNIRSYSYSYSLYAMSNHYGTMEG 950
Query: 477 GFYRVFVQRKSEELW 491
G Y F + + W
Sbjct: 951 GHYTAFCKNAVQNKW 965
>gi|148696216|gb|EDL28163.1| ubiquitin specific peptidase 8, isoform CRA_a [Mus musculus]
Length = 1108
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 148/384 (38%), Gaps = 105/384 (27%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI+ S IR++ GL N+ T ++N +Q L
Sbjct: 732 RENKPPCYPKA-EISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 790
Query: 216 LRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ---VSPHEFLQAVM 264
L ++F + N K + FG + + +W GQ +SP +F +
Sbjct: 791 LADYFNRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDFKVTIG 845
Query: 265 KASKKRFRIGVQSNPVEFMSWLLNTLHSDL----------------------------RN 296
K + + F Q + E + +L++ LH DL ++
Sbjct: 846 KINDQ-FAGSSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNEHLDDLQAAEHAWQKH 904
Query: 297 TKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLG 356
+ N SII FQG+ K+T+ SR +
Sbjct: 905 KQLNESIIVALFQGQF-------KSTVQCL----------------TCRRRSRTFEAFMY 941
Query: 357 LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR--------VT 407
L LP K ++ + L+ F E +T+ R + + R R +
Sbjct: 942 LSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIW 991
Query: 408 RLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIAN 467
+LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK + K KY+L +
Sbjct: 992 KLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNSLK---KYNLFSV 1046
Query: 468 IVHDGKPEGGFYRVFVQRKSEELW 491
H G +GG Y + + + + W
Sbjct: 1047 SNHYGGLDGGHYTAYCKNAARQRW 1070
>gi|31981044|ref|NP_062703.2| ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Mus musculus]
gi|44888442|sp|Q80U87.2|UBP8_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 8; AltName:
Full=Deubiquitinating enzyme 8; AltName: Full=Ubiquitin
isopeptidase Y; Short=mUBPy; AltName: Full=Ubiquitin
thioesterase 8; AltName:
Full=Ubiquitin-specific-processing protease 8
gi|29747898|gb|AAH50947.1| Ubiquitin specific peptidase 8 [Mus musculus]
gi|38181867|gb|AAH61465.1| Ubiquitin specific peptidase 8 [Mus musculus]
gi|42490777|gb|AAH66126.1| Ubiquitin specific peptidase 8 [Mus musculus]
Length = 1080
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 149/389 (38%), Gaps = 115/389 (29%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI+ S IR++ GL N+ T ++N +Q L
Sbjct: 704 RENKPPCYPKA-EISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 762
Query: 216 LRNFFLIPENYRHC-------------KSPLVHRFGDLTRKIWHARNFKGQ---VSPHEF 259
L ++F R+C K + FG + + +W GQ +SP +F
Sbjct: 763 LADYF-----NRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDF 812
Query: 260 LQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL------------------------- 294
+ K + + F Q + E + +L++ LH DL
Sbjct: 813 KVTIGKINDQ-FAGSSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNEHLDDLQAAEH 871
Query: 295 ---RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMP 351
++ + N SII FQG+ K+T+ SR
Sbjct: 872 AWQKHKQLNESIIVALFQGQF-------KSTVQCL----------------TCRRRSRTF 908
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR----- 405
+ L LP K ++ + L+ F E +T+ R + + R R
Sbjct: 909 EAFMYLSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRARRDSLK 958
Query: 406 ---VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKY 462
+ +LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK + K KY
Sbjct: 959 KIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNSLK---KY 1013
Query: 463 DLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+L + H G +GG Y + + + + W
Sbjct: 1014 NLFSVSNHYGGLDGGHYTAYCKNAARQRW 1042
>gi|148696217|gb|EDL28164.1| ubiquitin specific peptidase 8, isoform CRA_b [Mus musculus]
Length = 1119
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 148/384 (38%), Gaps = 105/384 (27%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI+ S IR++ GL N+ T ++N +Q L
Sbjct: 743 RENKPPCYPKA-EISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 801
Query: 216 LRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ---VSPHEFLQAVM 264
L ++F + N K + FG + + +W GQ +SP +F +
Sbjct: 802 LADYFNRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDFKVTIG 856
Query: 265 KASKKRFRIGVQSNPVEFMSWLLNTLHSDL----------------------------RN 296
K + + F Q + E + +L++ LH DL ++
Sbjct: 857 KINDQ-FAGSSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNEHLDDLQAAEHAWQKH 915
Query: 297 TKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLG 356
+ N SII FQG+ K+T+ SR +
Sbjct: 916 KQLNESIIVALFQGQF-------KSTVQCL----------------TCRRRSRTFEAFMY 952
Query: 357 LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR--------VT 407
L LP K ++ + L+ F E +T+ R + + R R +
Sbjct: 953 LSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIW 1002
Query: 408 RLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIAN 467
+LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK + K KY+L +
Sbjct: 1003 KLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNSLK---KYNLFSV 1057
Query: 468 IVHDGKPEGGFYRVFVQRKSEELW 491
H G +GG Y + + + + W
Sbjct: 1058 SNHYGGLDGGHYTAYCKNAARQRW 1081
>gi|357588457|ref|NP_001239509.1| ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Mus musculus]
Length = 1091
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 149/389 (38%), Gaps = 115/389 (29%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI+ S IR++ GL N+ T ++N +Q L
Sbjct: 715 RENKPPCYPKA-EISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 773
Query: 216 LRNFFLIPENYRHC-------------KSPLVHRFGDLTRKIWHARNFKGQ---VSPHEF 259
L ++F R+C K + FG + + +W GQ +SP +F
Sbjct: 774 LADYF-----NRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDF 823
Query: 260 LQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL------------------------- 294
+ K + + F Q + E + +L++ LH DL
Sbjct: 824 KVTIGKINDQ-FAGSSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNEHLDDLQAAEH 882
Query: 295 ---RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMP 351
++ + N SII FQG+ K+T+ SR
Sbjct: 883 AWQKHKQLNESIIVALFQGQF-------KSTVQCL----------------TCRRRSRTF 919
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR----- 405
+ L LP K ++ + L+ F E +T+ R + + R R
Sbjct: 920 EAFMYLSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRARRDSLK 969
Query: 406 ---VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKY 462
+ +LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK + K KY
Sbjct: 970 KIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNSLK---KY 1024
Query: 463 DLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+L + H G +GG Y + + + + W
Sbjct: 1025 NLFSVSNHYGGLDGGHYTAYCKNAARQRW 1053
>gi|5058999|gb|AAD38869.1|AF057146_1 putative deubiquitinating enzyme UBPY [Mus musculus]
Length = 1080
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 149/389 (38%), Gaps = 115/389 (29%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI+ S IR++ GL N+ T ++N +Q L
Sbjct: 704 RENKPPCYPKA-EISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 762
Query: 216 LRNFFLIPENYRHC-------------KSPLVHRFGDLTRKIWHARNFKGQ---VSPHEF 259
L ++F R+C K + FG + + +W GQ +SP +F
Sbjct: 763 LADYF-----NRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDF 812
Query: 260 LQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL------------------------- 294
+ K + + F Q + E + +L++ LH DL
Sbjct: 813 KVTIGKINDQ-FAGSSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNEHLDDLQAAEH 871
Query: 295 ---RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMP 351
++ + N SII FQG+ K+T+ SR
Sbjct: 872 AWQKHKQLNESIIVALFQGQF-------KSTVQCL----------------TCRRRSRTF 908
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR----- 405
+ L LP K ++ + L+ F E +T+ R + + R R
Sbjct: 909 EAFMYLSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRARRDSLK 958
Query: 406 ---VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKY 462
+ +LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK + K KY
Sbjct: 959 KIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNSLK---KY 1013
Query: 463 DLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+L + H G +GG Y + + + + W
Sbjct: 1014 NLFSVSNHYGGLDGGHYTAYCKNAARQRW 1042
>gi|307177521|gb|EFN66632.1| Ubiquitin carboxyl-terminal hydrolase 2 [Camponotus floridanus]
Length = 762
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 118/320 (36%), Gaps = 37/320 (11%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRKIW 245
GL NI T F+N IQ L PL + L I K L+ F + ++W
Sbjct: 424 GLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQYLADINTTTSSMKGALIKAFSQVIHELW 483
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSI- 303
V L++ ++ RF Q + EF+ +LL LH D+ R T K I
Sbjct: 484 EVGG--DHVVNTTALKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTTKLPPIH 541
Query: 304 -----IYECFQGELEVVKEIPKNTIS-------GNDQNTEKGSDGGDDHDNITTETSRMP 351
Y Q +E K ++ S G +++ + DH ++T + P
Sbjct: 542 GDIPDSYTDMQKAVESWKRYLRSEDSMIVDVFVGQLRSSLHCTSC--DHVSVTLD----P 595
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPK 411
F L LP P V + +L + T ++ + + + PK
Sbjct: 596 FW--DLSLPIPGRSGTVKLSQCLEHFTREEVLDGDEKPTCSKCQMRRKCTKSFSIQKFPK 653
Query: 412 YMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHD 471
+++H++RF+ F K +V+FP+ L+L + P Y+L H
Sbjct: 654 ILVIHLKRFSPMERFRGKLNVMVDFPLTGLDLSAFAAPRVPG------CTYNLYGVANHS 707
Query: 472 GKPEGGFYRVFVQRKSEELW 491
G G Y + + W
Sbjct: 708 GTTYSGHYTAYCKHPYSGEW 727
>gi|74137217|dbj|BAE21996.1| unnamed protein product [Mus musculus]
Length = 1080
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 149/389 (38%), Gaps = 115/389 (29%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI+ S IR++ GL N+ T ++N +Q L
Sbjct: 704 RENKPPCYPKA-EISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 762
Query: 216 LRNFFLIPENYRHC-------------KSPLVHRFGDLTRKIWHARNFKGQ---VSPHEF 259
L ++F R+C K + FG + + +W GQ +SP +F
Sbjct: 763 LADYF-----NRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDF 812
Query: 260 LQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL------------------------- 294
+ K + + F Q + E + +L++ LH DL
Sbjct: 813 KVTIGKINDQ-FAGSSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNEHLDDLQAAEH 871
Query: 295 ---RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMP 351
++ + N SII FQG+ K+T+ SR
Sbjct: 872 AWQKHKQLNESIIVALFQGQF-------KSTVQCL----------------TCRRRSRTF 908
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR----- 405
+ L LP K ++ + L+ F E +T+ R + + R R
Sbjct: 909 EAFMYLSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRARRDSLK 958
Query: 406 ---VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKY 462
+ +LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK + K KY
Sbjct: 959 KIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNSLK---KY 1013
Query: 463 DLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+L + H G +GG Y + + + + W
Sbjct: 1014 NLFSVSNHYGGLDGGHYTAYCKNAARQRW 1042
>gi|10434580|dbj|BAB14306.1| unnamed protein product [Homo sapiens]
gi|37727299|gb|AAO34133.1| deubiquitinating enzyme 1 [Homo sapiens]
Length = 548
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 126/313 (40%), Gaps = 52/313 (16%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 240
Query: 304 IYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPP 362
+++ F G L VK ++S D +D P+L + L++
Sbjct: 241 VHQIFGGYLRSRVKCSVCKSVS-------------DTYD---------PYLDVALEI--- 275
Query: 363 PLFKDVMEKNIIPQVPLF---NILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRR 419
NI+ + LF ++L + + + A R+ + R + L ++R
Sbjct: 276 -----RQAANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKR 330
Query: 420 FTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG-KPEGGF 478
F NF K V +P + L ++ Y+ +N Y L A +VH G G
Sbjct: 331 FA--NFSGGKITKDVGYP-EFLNIRPYM-----SQNNGDPVMYGLYAVLVHSGYSCHAGH 382
Query: 479 YRVFVQRKSEELW 491
Y +V+ + + +
Sbjct: 383 YYCYVKASNGQWY 395
>gi|426226105|ref|XP_004007194.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 20 [Ovis aries]
Length = 992
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 94/243 (38%), Gaps = 54/243 (22%)
Query: 105 CPYLDT---VNRQVLDFDFEKFC-SVSLSNLNVYACLVCGKYYQGRGQK--SHAYTHSLE 158
CP+LD+ V ++ L + C S +S N++ACL Y G G+ H+ H+
Sbjct: 8 CPHLDSIGEVTKEDLLLKSKSTCQSCGVSGPNLWACLQVSCSYVGCGESFADHSTLHAQA 67
Query: 159 AGHHVYINLRTEKVYCLPDGYEI---------------------NDPSLEDIRHV----- 192
H++ +NL T +V+C E+ + P +R V
Sbjct: 68 KKHNLTVNLTTLRVWCYACEKEVLLQPRLATHPPGPAPKFSEQDSPPPSPPLRAVPIAVA 127
Query: 193 ------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFL-IPENYRHCKSP- 232
G+ N+ + ++N +Q+L PL FFL R K P
Sbjct: 128 DEGESESEDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKPA 187
Query: 233 LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHS 292
L + L ++WH R V P + K FR Q + EF+ L++ LH
Sbjct: 188 LCKSYQKLVSEVWH-RKRPSYVVPTSLSHGI-KLVNPMFRGYAQQDTQEFLRCLMDQLHE 245
Query: 293 DLR 295
+L+
Sbjct: 246 ELK 248
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V RLP+ + +H++RF + K + V+FP++ L+L+ ++ KE + YDL
Sbjct: 562 KVLRLPEILCIHLKRFRHEVMYSFKISSHVSFPLEGLDLRPFL----AKECTSQITTYDL 617
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + Q W
Sbjct: 618 LSVICHHGTAGSGHYIAYCQNVINGQW 644
>gi|353238811|emb|CCA70745.1| related to UBP12-ubiquitin C-terminal hydrolase [Piriformospora
indica DSM 11827]
Length = 1142
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 64/135 (47%), Gaps = 13/135 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI--------PENYRHCKSPLVHRFGDLTRK 243
VGLNN+ T F+N +Q L L +FL P N K + FG + K
Sbjct: 400 VGLNNLGNTCFMNSALQCLAHTPELTEYFLTGVYRTELNPTNPLGMKGAIAEVFGGVLDK 459
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+WH ++ V+P EF Q + + + + F Q + EF+++LL+ LH DL K +
Sbjct: 460 LWHPISYA--VAPREFKQQLQRFAPQ-FSGYAQHDTQEFLAFLLDGLHEDLNRVLKKPYV 516
Query: 304 IYECFQ--GELEVVK 316
+ GE E+VK
Sbjct: 517 ENPDWNGGGEKELVK 531
>gi|344248888|gb|EGW04992.1| Ubiquitin carboxyl-terminal hydrolase 8 [Cricetulus griseus]
Length = 1075
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 138/353 (39%), Gaps = 102/353 (28%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHC-------------KSPLVHRFG 238
GL N+ T ++N +Q L L ++F R+C K + FG
Sbjct: 734 TGLRNLGNTCYMNSILQCLCNAPHLADYF-----NRNCYQDDINRSNLLGHKGEVAEEFG 788
Query: 239 DLTRKIWHARNFKGQ---VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL- 294
+ + +W GQ +SP +F + K + + F Q + E + +L++ LH DL
Sbjct: 789 IIMKALW-----TGQYRYISPKDFKVTIGKINDQ-FAGSSQQDSQELLLFLMDGLHEDLN 842
Query: 295 ---------------------------RNTKKNTSIIYECFQGELEVVKEIPKNTISGND 327
++ + N SII FQG+ K+T+
Sbjct: 843 KADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQF-------KSTVQCL- 894
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD 387
+ SR + L LP K ++ + L+ F
Sbjct: 895 ---------------TCHKKSRTFEAFMYLSLPLASTSKCTLQ----------DCLRLFS 929
Query: 388 GE-TVTEVVRPHVARMRYR--------VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPV 438
E +T+ R + + R R + +LP +++H++RF+ + + +K T V+FP+
Sbjct: 930 KEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 989
Query: 439 KNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+NL+L Y+ PK + K KY+L + H G +GG Y + + + + W
Sbjct: 990 ENLDLSQYV--IGPKSSLK---KYNLFSVSNHYGGLDGGHYTAYCKNAARQRW 1037
>gi|18400378|ref|NP_566486.1| ubiquitin carboxyl-terminal hydrolase 25 [Arabidopsis thaliana]
gi|75262798|sp|Q9FPS2.1|UBP25_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 25; AltName:
Full=Deubiquitinating enzyme 25; Short=AtUBP25; AltName:
Full=Ubiquitin thioesterase 25; AltName:
Full=Ubiquitin-specific-processing protease 25
gi|11993490|gb|AAG42763.1|AF302673_1 ubiquitin-specific protease 25 [Arabidopsis thaliana]
gi|60543331|gb|AAX22263.1| At3g14400 [Arabidopsis thaliana]
gi|332641992|gb|AEE75513.1| ubiquitin carboxyl-terminal hydrolase 25 [Arabidopsis thaliana]
Length = 661
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 132/301 (43%), Gaps = 32/301 (10%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHR------FGDLTRKIW 245
+GL N+ T ++N +Q L PL NF L ++ HC + + F + ++I
Sbjct: 24 LGLRNLGNTCYLNSVLQCLTFTPPLANFCLTHKHSSHCDTYVDGERKRDCPFCIVEKRIA 83
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIY 305
+ + + + +K + F++G Q + EF+ ++++ H+ KK
Sbjct: 84 RSLSVDLTTDAPNKISSCLKIFAEHFKLGRQEDAHEFLRYVIDACHNTSLRLKKLRYNGN 143
Query: 306 ECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLM-LGLDLPPPPL 364
E F G VVKEI G Q+ K G E+++ +M + L++
Sbjct: 144 EPFNGN-SVVKEI----FGGALQSQVKCLSCG-------AESNKADEIMDISLEILQSSS 191
Query: 365 FKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNN 424
K+ ++K Q + + K+ E+ ++V AR + + + P +++ ++RF
Sbjct: 192 VKESLQKFF--QSEILDGNNKYRCESCEKLV---TARKQMSILQAPNILVIQLKRF--GG 244
Query: 425 FFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG-KPEGGFYRVFV 483
F K ++F + L L +++ K ++ + +Y L IVH G PE G Y +V
Sbjct: 245 IFGGKIDKAISFG-EILVLSNFM----SKASKDPQPEYKLFGIIVHSGFSPESGHYYAYV 299
Query: 484 Q 484
+
Sbjct: 300 K 300
>gi|297798878|ref|XP_002867323.1| ubiquitin-specific protease 24 [Arabidopsis lyrata subsp. lyrata]
gi|297313159|gb|EFH43582.1| ubiquitin-specific protease 24 [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 144/347 (41%), Gaps = 52/347 (14%)
Query: 184 PSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFF--LIPENYRHCKSPLVHRFGDLT 241
P ++D GL N F+N T+Q+L+ +P + ++ SP + F +
Sbjct: 188 PPVKDFTPRGLINAGNLCFLNATLQALLSCSPFVQLLQRIQLQDIPKADSPTLAAFSEFI 247
Query: 242 RK--IWHARNFKGQVSPHE----FLQAVMKASKKRFRIGV---------QSNPVEFMSWL 286
+ + + + + V+ E F A+ + + F V Q + EF+S++
Sbjct: 248 SELDVPSSSSIRNNVTVVEAGRPFRPAMFEGVLRNFTPDVLNNMSGRPRQEDAQEFLSFI 307
Query: 287 LNTLHSDL--------RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSD--- 335
++ +H +L + T +S+I + E PKN + + S+
Sbjct: 308 MDQMHDELLKLKEQSPKVTASKSSVISSANDDDDEWETVGPKNKSAVTRTQSFVPSELSE 367
Query: 336 --GGDDHDNITTETSRM-----PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDG 388
GG + + ++ P+L+L LD+ P + K I + LF+ + +G
Sbjct: 368 IFGGQLKSVVKAKGTKASATVQPYLLLHLDIHPDGV------KGIEDALHLFSAQEDLEG 421
Query: 389 --ETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVK-NLELKD 445
+VT A ++ +L K MILH+ RF+ + K V FP++ NL
Sbjct: 422 YRASVTGKTGVVSASKSIKIQKLSKIMILHLMRFSYGSQGSTKLHKGVKFPLELNLNRNH 481
Query: 446 YIPLPTPKENEKLRSKYDLIANIVHDG-KPEGGFYRVFVQRKSEELW 491
+ L NE LR Y+L+A I H G P G Y +RK+ + W
Sbjct: 482 LVSL----SNESLR--YELVATITHHGWDPSKGHYTTDARRKNGQ-W 521
>gi|410986643|ref|XP_003999619.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 1
[Felis catus]
gi|410986645|ref|XP_003999620.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 2
[Felis catus]
gi|410986647|ref|XP_003999621.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 3
[Felis catus]
Length = 566
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 124/339 (36%), Gaps = 70/339 (20%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 212 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 269
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ + +
Sbjct: 270 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAAP 327
Query: 304 IYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNIT------TETSRMPFLMLG- 356
I L + G + SD DD N+ E S++ L +G
Sbjct: 328 I-------LASGAAASQPRRGGALLEEPELSD--DDRANLMWKRYLEREDSKIVDLFVGQ 378
Query: 357 ----------------------LDLPPPPLFKDVMEKNIIPQVPLFNILKK---FDGETV 391
L LP P K + FN+ K + E
Sbjct: 379 LKSCLKCQACGYRSTTFEVFCDLSLPIP---KKGFAGGKVSLRDCFNLFTKEEELESENA 435
Query: 392 TEVVRPHVARMRYRVTR------LPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKD 445
R R + R T+ P+ ++LH+ RF+ + ++K+ V+FP++ L L D
Sbjct: 436 PVCDR---CRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKKSSVGVDFPLQRLSLGD 492
Query: 446 YIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQ 484
+ ++ Y L A H G G Y +
Sbjct: 493 F------ASDKAGSPIYQLYALCNHSGSVHYGHYTALCR 525
>gi|340368234|ref|XP_003382657.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Amphimedon
queenslandica]
Length = 884
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Query: 395 VRPHV-ARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPK 453
+ HV A ++ + ++P+ +++H++RF+ N +F K + V FP++NL+L DY+
Sbjct: 701 CKEHVQASKKFDLWKMPEILVIHLKRFSYNRYFRNKIESKVEFPLENLDLSDYV-----V 755
Query: 454 ENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
E+ + YDL A H G GG Y + + K W
Sbjct: 756 NQEEPQPLYDLFAVSNHFGGLGGGHYTAYAKNKDNGKW 793
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 69/172 (40%), Gaps = 46/172 (26%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPEN------YRHC--KSPL------VHRF 237
GL+N+ T F+N +Q L PL +F+ E +H +PL +
Sbjct: 307 CGLSNLGNTCFMNSALQCLGNTKPLVEYFIGKEGEAEKPYKKHINRNNPLGMGGVIAETY 366
Query: 238 GDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT 297
G L ++W+ +N ++P +F + ++ +F Q + E +++LL+ LH DL
Sbjct: 367 GSLLDEMWNGQN--SYLAPRQF-KNIIGRHAPQFSGYSQHDSHELLAFLLDGLHEDLNLV 423
Query: 298 KK-----------------------------NTSIIYECFQGELEVVKEIPK 320
KK N S+I FQG+L+ PK
Sbjct: 424 KKKPYVDMDIKTDGRDDNDIARETWLKYLQRNQSVIVRLFQGQLKSTLHCPK 475
>gi|145351758|ref|XP_001420231.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580465|gb|ABO98524.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 316
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 118/314 (37%), Gaps = 55/314 (17%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
GL N+ T F+N +Q L L NF L E+ ++ + ++ + A N
Sbjct: 2 AGLANLGNTCFLNSVLQCLTHTPALANFALRGEHKKYKTGGSFNALYEIGEHVARALNSS 61
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL----------RNTKKNT 301
G+ L ++A K FR G Q + E LL+ +H + + T
Sbjct: 62 GRTIAPTALVKNLRALSKTFRKGRQEDAHELARCLLDAMHKKCVEVVKPKISPNSARAET 121
Query: 302 SIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPP 361
S +++ F G L ++ T N + + PFL L L++
Sbjct: 122 SFVWKVFGGRLR--SQVNCKTCGRNSETFD-------------------PFLDLSLEVGR 160
Query: 362 PPLFKDVMEKNIIPQVPLFNILKKFDG------ETVTEVVRPHV--ARMRYRVTRLPKYM 413
K+++ +F + DG E + + H+ A ++ V + P +
Sbjct: 161 A--------KSVLGAFKMFTHTEVLDGDNKYRCEGKSANSKSHLTKASKQFTVNQAPNVL 212
Query: 414 ILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSK--YDLIANIVHD 471
L ++RF F K V +P LEL D P T E R K YDL +VH
Sbjct: 213 ALQLKRFAYVPFGRGKLNHFVEYP---LEL-DITPY-TSDEGLTSRGKAVYDLYGVLVHA 267
Query: 472 GKPE-GGFYRVFVQ 484
G G Y FV+
Sbjct: 268 GNSSNSGHYYCFVK 281
>gi|405962262|gb|EKC27956.1| Ubiquitin carboxyl-terminal hydrolase 2 [Crassostrea gigas]
Length = 368
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 111/263 (42%), Gaps = 42/263 (15%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE-------NYRHCKSPLVHRFGDLTRKI 244
VGL N+ T F+N +Q L PL +FL + K LV + +L + +
Sbjct: 64 VGLRNLGNTCFMNSVLQCLSNTKPLLEYFLRDDFTFDKNTTTSSMKGQLVTAYANLMKSM 123
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK---KNT 301
W+ R+ QVSP+ F + + + RF Q + EF+ +LL LH D+ K
Sbjct: 124 WNERS-DSQVSPNSFKTQIQRFA-PRFMGYAQQDAQEFLRYLLEGLHEDVNKVTSKPKPV 181
Query: 302 SIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDG--------GDDHDNITTETSRMPFL 353
+I E F + + KE + ++ ++ + + G DH ++T + PF
Sbjct: 182 TIQDEDFSNDQDKAKEYWRVYLTYDNSHIVEIFVGQLKSELRFDCDHRSVTFD----PF- 236
Query: 354 MLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYR-------- 405
L +P P + DV +II + F + DG+ RP ++ R R
Sbjct: 237 -WDLSVPIPKMRNDV---SIIQCLTAFMKAEVLDGDE-----RPTCSKCRKRMRCTKMFS 287
Query: 406 VTRLPKYMILHMRRFTKNNFFVE 428
+ R P ++L +R N + V
Sbjct: 288 IQRFPTILVLRGKRVLYNLYGVS 310
>gi|432959676|ref|XP_004086360.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11-like [Oryzias
latipes]
Length = 1014
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 4/118 (3%)
Query: 377 VPLFNILKKFDGET--VTEVVRPH-VARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTL 433
+ LF ++ + E V + H +A + + LP+ +I+H++RF+ F EK ++
Sbjct: 822 IELFTTVETLEEENPWYCPVCKKHQLATKKLDLWSLPEVLIIHLKRFSYTKFTREKLDSI 881
Query: 434 VNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
V+FP+++L+ D++ L +E+ S+YDLIA H G G Y + + K W
Sbjct: 882 VDFPLRDLDFSDFL-LRKSLSSEEPPSRYDLIAVSNHYGGLRDGHYTSYAKNKDNAQW 938
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 11/120 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL +FL N K + + D+ ++
Sbjct: 243 CGLTNLGNTCFMNSALQCLSNTPPLTEYFLQNSYLDELNFTNPLGMKGEIAEAYADVIKQ 302
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R++ V P F V + + F Q + E +S+LL+ LH DL K I
Sbjct: 303 MWSGRHYS--VVPRVFKTKVGHFASQ-FLGYQQHDSQELLSFLLDGLHEDLNRVKNKEYI 359
>gi|345316759|ref|XP_001507122.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like, partial
[Ornithorhynchus anatinus]
Length = 631
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 99/253 (39%), Gaps = 66/253 (26%)
Query: 105 CPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLVCGKYYQGRGQK--SHAYTHS 156
CP+L++V + +K C V NL +ACL G Y G G+ H+ HS
Sbjct: 8 CPHLESVGEITKEELIQKSHGTCQDCKVRGPNL--WACLENGCSYVGCGESYVDHSTIHS 65
Query: 157 LEAGHHVYINLRTEKVYC------------------LPDGYEIND-------------PS 185
+ H + +NL T +V+C LP ++ P+
Sbjct: 66 QDTKHCLTVNLTTLRVWCYACSKEVFLDRKLGTQSPLPSARQLQQVQENVQDFKISGTPT 125
Query: 186 LE----------DIR-----------HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-IP 223
L+ DI GL NI T ++N +Q+L PL FFL
Sbjct: 126 LKMPLAAVFDDLDIEVEEEDELKTRGLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCG 185
Query: 224 ENYRHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEF 282
R K P + + + L ++WH ++ G V P Q + K FR Q + EF
Sbjct: 186 GLVRTDKKPAICKSYLKLMTELWH-KSRPGSVVPTNLFQGI-KTVNPAFRGYSQQDAQEF 243
Query: 283 MSWLLNTLHSDLR 295
+ L++ LH +L+
Sbjct: 244 LRCLMDLLHEELK 256
Score = 45.1 bits (105), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 565 KVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQSFLAKDSPAQ----IVTYDL 620
Query: 465 IANIVHDG 472
++ I H G
Sbjct: 621 LSAICHHG 628
>gi|148707161|gb|EDL39108.1| ubiquitin specific peptidase 21, isoform CRA_b [Mus musculus]
Length = 566
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 124/337 (36%), Gaps = 65/337 (19%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 211 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 268
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 269 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 326
Query: 303 IIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNIT------TETSRMPFLMLG 356
I+ +P G E+ DD N+ E S++ L +G
Sbjct: 327 IL---------ASGPVPSPPCRGGGALHEEPELSDDDRANLMWKRYLEREDSKIVDLFVG 377
Query: 357 -----------------------LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTE 393
L LP P + ++ LF ++ + E
Sbjct: 378 QLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEELESENAPV 437
Query: 394 VVRPHVARMRYR------VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYI 447
R R + R V R P+ + L + RF+ + ++K+ V+FP++ L L D+
Sbjct: 438 CDR---CRQKTRSTKKLTVQRFPRILGLDLNRFSTSRGSIKKSSVGVDFPLQRLSLGDF- 493
Query: 448 PLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQ 484
++ Y L A H G G Y +
Sbjct: 494 -----ASDKAGSPVYQLYALCNHSGSVHYGHYTALCR 525
>gi|345805954|ref|XP_537816.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Canis lupus
familiaris]
Length = 915
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 94/243 (38%), Gaps = 54/243 (22%)
Query: 105 CPYLDT---VNRQVLDFDFEKFC-SVSLSNLNVYACLVCGKYYQGRGQK--SHAYTHSLE 158
CP+LD+ V ++ L F + C S ++ N++ACL Y G G+ H+ H+
Sbjct: 8 CPHLDSIGEVTKEDLLFKSKGACQSCGVTGPNLWACLQVACPYVGCGESFADHSTIHAQA 67
Query: 159 AGHHVYINLRTEKVYCL---------------PDG------------------------- 178
H++ +NL T +V+C P G
Sbjct: 68 KKHNLTVNLTTFRVWCYACEKEVFLEQRLAAHPAGPSPRFSEQDSPLPSHPLKAVPIAVA 127
Query: 179 ----YEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-IPENYRHCKSP- 232
E D L+ G+ N+ + ++N +Q+L PL FFL R K P
Sbjct: 128 DEGESESEDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKPA 187
Query: 233 LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHS 292
L + L ++WH R V P + K FR Q + EF+ L++ LH
Sbjct: 188 LCKSYQKLVSEVWHRRR-PSYVVPTSLSHGI-KLVNPMFRGYAQQDTQEFLCCLMDQLHE 245
Query: 293 DLR 295
+L+
Sbjct: 246 ELK 248
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V RLP+ + +H++RF + K + V+FP++ L+L+ ++ KE + YDL
Sbjct: 575 KVLRLPEILYIHLKRFRHEVMYSFKISSHVSFPLEGLDLRPFL----AKECTSQITTYDL 630
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + Q W
Sbjct: 631 LSVICHHGTAGSGHYIAYCQNVINGQW 657
>gi|356535264|ref|XP_003536168.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like isoform 1
[Glycine max]
Length = 926
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 80/183 (43%), Gaps = 17/183 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-------ENYRHCKSPLVHRFGDLTRKI 244
GL N+ T F+N +IQ L+ PL +FL +N + L FGDL RK+
Sbjct: 319 AGLQNLGNTCFMNSSIQCLVHTPPLSEYFLQDYSDEINMDNPLGMRGELALAFGDLLRKL 378
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSII 304
W + + ++P F + + + + F Q + E +++LL+ LH DL K+ I
Sbjct: 379 WSSG--RTAIAPRAFKSKLARFAPQ-FSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 435
Query: 305 YECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLGL 357
+ G + EV E KN ++ ND G + ++ PF+ L L
Sbjct: 436 MKDSDGRPDEEVASECWKNHMARNDSLIVDVCQGQYKSTLVCPVCGKISITFDPFMYLSL 495
Query: 358 DLP 360
LP
Sbjct: 496 PLP 498
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 30/48 (62%)
Query: 400 ARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYI 447
A + + +LP+ ++ H++RF+ + + K T VNFP+ NL+L Y+
Sbjct: 795 ATKKLDLWKLPEILVFHLKRFSYSRYLKNKLDTFVNFPIHNLDLTKYV 842
>gi|118380392|ref|XP_001023360.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila]
gi|89305127|gb|EAS03115.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila SB210]
Length = 807
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 125/302 (41%), Gaps = 23/302 (7%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP----LVHRFGDLTRKIWHA 247
GLNNI T F+N +Q + TP+ N F ++ +P + + L +++ +
Sbjct: 461 AGLNNIGNTCFMNSALQCVFN-TPVFNEFFFSGSFEKDINPKNKGVAQSYSVLIKQVRNT 519
Query: 248 RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL---RNTKKNTSII 304
N Q +P+ +++ + S +F Q + E + LL+ LH DL R K +
Sbjct: 520 GNSSSQ-APYALKKSIERVSS-QFYGTDQQDAQELLRCLLDGLHEDLNRVRAKPKYRELE 577
Query: 305 YECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPL 364
+ + L+ + + G D + G + + L +
Sbjct: 578 ADTNKRTLQEISDDWYQYYKGRDDSVVTDFFSGQLLSKVICSKCKNESLAFDNFMDLSLS 637
Query: 365 FKDVMEKNIIPQVPLFNILKKF-------DGETVTEVVRPHVARMRYRVTRLPKYMILHM 417
F E + L ++LK F D ++ +R ++ + +LP+ +++H+
Sbjct: 638 FSRGQEN----EADLVDLLKAFLKEENLDDDYYCSKCKARTKSRRQFELYKLPQILVIHL 693
Query: 418 RRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGG 477
+RF + K + V+FPV N +++ +I T +N SKY+L + H G GG
Sbjct: 694 KRFNFGRSYRNKISSNVSFPVTNFDVQQFIQSST--DNSVKNSKYELFGIVNHSGSLSGG 751
Query: 478 FY 479
Y
Sbjct: 752 HY 753
>gi|50556092|ref|XP_505454.1| YALI0F15367p [Yarrowia lipolytica]
gi|49651324|emb|CAG78263.1| YALI0F15367p [Yarrowia lipolytica CLIB122]
Length = 992
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 133/337 (39%), Gaps = 59/337 (17%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRH---------CKSPLVHRFGDLTR 242
GL N+ T ++N IQ L T ++ + Y+H K L+ ++ DL +
Sbjct: 634 TGLKNLGNTCYINCIIQCL--ATSQLTKIIVNQAYKHRVNMKSKLGYKGALIAKYADLVQ 691
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTS 302
+ N + P F + ++ +F Q + EF++++L+ LH +L +
Sbjct: 692 AL--VANAYPYLVPTSF-KGIIAHVNSQFSGMEQHDCQEFLTFILDGLHEELNSVGDGQY 748
Query: 303 IIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNI--------------TTETS 348
E + E + +E+ +S + S D T T+
Sbjct: 749 KPRELTESEEKRREEMSVRIVSSLEWERYLKSASSFIVDEFQGQYQSKLQCTVCKMTSTT 808
Query: 349 RMPFLMLGLDLP-----PPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVV-----RPH 398
F L L +P P D + P++ +GE + + RP
Sbjct: 809 YTAFSSLTLPIPKYAGATLPTLYDCFNQFTQPEL--------LEGENMWQCPTCKKPRPT 860
Query: 399 VARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKL 458
+ M+ ++RLP+ +I+H++RF + + +K T V +P++ ++L Y P PT ++ L
Sbjct: 861 IKSMK--ISRLPETLIIHLKRFDHSRGYGDKLNTFVTYPLE-MDLTRYWPPPTSEDEPFL 917
Query: 459 RS----------KYDLIANIVHDGKPEGGFYRVFVQR 485
+ +Y L H G GG Y F +R
Sbjct: 918 KKLLPRGQTAPFRYSLFGVANHYGTLRGGHYTSFCKR 954
>gi|119609939|gb|EAW89533.1| ubiquitin specific peptidase 36, isoform CRA_a [Homo sapiens]
Length = 1075
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 125/313 (39%), Gaps = 53/313 (16%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 240
Query: 304 IYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPP 362
+++ F G L VK ++S D +D P+L + L++
Sbjct: 241 VHQIFGGYLRSRVKCSVCKSVS-------------DTYD---------PYLDVALEI--- 275
Query: 363 PLFKDVMEKNIIPQVPLF---NILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRR 419
NI+ + LF ++L + + + A R+ + R + L ++R
Sbjct: 276 -----RQAANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKR 330
Query: 420 FTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG-KPEGGF 478
F NF K V +P + L ++ Y+ +N Y L A +VH G G
Sbjct: 331 FA--NFSGGKITKDVGYP-EFLNIRPYM-----SQNNGDPVMYGLYAVLVHSGYSCHAGH 382
Query: 479 YRVFVQRKSEELW 491
Y +V + S W
Sbjct: 383 YYCYV-KASNGQW 394
>gi|449508402|ref|XP_004176928.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 2
[Taeniopygia guttata]
Length = 903
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 101/254 (39%), Gaps = 66/254 (25%)
Query: 104 DCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLVCGKYYQGRGQK--SHAYTH 155
+CP+L++V + +K C V NL +ACL Y G G+ H+ TH
Sbjct: 7 NCPHLESVGEITKEELIQKSHGTCQDCKVRGPNL--WACLENKCTYVGCGESHVDHSTTH 64
Query: 156 SLEAGHHVYINLRTEKVYCLPDGYEI--------------------------------ND 183
S E H + +NL T +V+C E+ ++
Sbjct: 65 SQETKHCLTVNLTTLRVWCYACSKEVFLDRKLGSHSPLPSTRLSHQAQENNVQDFKIPSN 124
Query: 184 PSLE----------DIR----------HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP 223
P+L+ DI GL NI T ++N +Q+L PL +FFL
Sbjct: 125 PTLKIPLAAVFDDLDIEVEEDELKTRGLTGLKNIGNTCYMNAALQALSNCPPLTHFFLDC 184
Query: 224 ENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVE 281
R K P + + + L ++WH ++ G V P Q + K FR Q + E
Sbjct: 185 GGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTGLFQGI-KTVNPMFRGYSQQDAQE 242
Query: 282 FMSWLLNTLHSDLR 295
F+ L++ LH +L+
Sbjct: 243 FLRCLMDLLHEELK 256
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 565 KVQKFPEILCIHLKRFRHELMFSTKIGTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 620
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 621 LSVICHHGTASSGHYIAYCRNNLNNLW 647
>gi|116284123|gb|AAH16487.1| USP36 protein [Homo sapiens]
Length = 963
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 125/313 (39%), Gaps = 53/313 (16%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 240
Query: 304 IYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPP 362
+++ F G L VK ++S D +D P+L + L++
Sbjct: 241 VHQIFGGYLRSRVKCSVCKSVS-------------DTYD---------PYLDIALEI--- 275
Query: 363 PLFKDVMEKNIIPQVPLF---NILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRR 419
NI+ + LF ++L + + + A R+ + R + L ++R
Sbjct: 276 -----RQAANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKR 330
Query: 420 FTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG-KPEGGF 478
F NF K V +P + L ++ Y+ +N Y L A +VH G G
Sbjct: 331 FA--NFSGGKITKDVGYP-EFLNIRPYM-----SQNNGDPVMYGLYAVLVHSGYSCHAGH 382
Query: 479 YRVFVQRKSEELW 491
Y +V + S W
Sbjct: 383 YYCYV-KASNGQW 394
>gi|443694057|gb|ELT95284.1| hypothetical protein CAPTEDRAFT_97991, partial [Capitella teleta]
Length = 841
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V RLP+ + +H++RF F K + V+FP++NL++ Y+ K+ E + YDL
Sbjct: 493 KVMRLPEILCIHLKRFRHEFMFSTKINSYVSFPLENLDMGPYL----HKDCENQVTTYDL 548
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
+A I H G GG Y + + W
Sbjct: 549 VAVICHHGTAGGGHYTSYALNHLSQQW 575
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 88/217 (40%), Gaps = 48/217 (22%)
Query: 125 SVSLSNLNVYACLVCGKYYQGRGQ--KSHAYTHSLEAGHHVYI-NLRTEKVYCLPDGYEI 181
S + N++ C+ G + G G+ + H+ TH+ + +H + NL + +++C E+
Sbjct: 3 SCDVQGPNLWLCMHAGCLFTGCGEMAQDHSTTHAKQNKNHCLVMNLTSLRIWCYKCEGEV 62
Query: 182 ----NDP---------------------------------SLEDIRH----VGLNNIKET 200
NDP S +D + GL NI T
Sbjct: 63 FKDNNDPPFLFRSVVEPTSSLHSSPSRSNSPCGDMDTESESDDDTQKPRGLTGLQNIGNT 122
Query: 201 DFVNVTIQSLMRVTPLRNFFL-IPENYRHCKSPLVH-RFGDLTRKIWHARNFKGQVSPHE 258
++N IQSL PL FFL P + K P++ + L ++IWH + V P
Sbjct: 123 CYMNAAIQSLSNCPPLCRFFLDSPAYVKSDKKPMLSLSYMKLMQEIWHKKR-PSYVVPSS 181
Query: 259 FLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR 295
Q + K FR Q + EF+ ++ +H +L+
Sbjct: 182 VSQGI-KFIHPMFRGYTQQDAQEFLRCFMDQVHEELK 217
>gi|301616377|ref|XP_002937632.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Xenopus
(Silurana) tropicalis]
Length = 809
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 122/314 (38%), Gaps = 55/314 (17%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL N+ T F+N T+Q L PL N+ L E+ R+C+ + + N
Sbjct: 120 AGLQNLGNTCFLNATVQCLTYTPPLANYLLSKEHSRNCQQSGFCMLCIMQNHLIQVFANS 179
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL-------HSDLRNTKKNTSI 303
V P F++ + K + + FR G Q + EF+ + ++ + ++ L + TS+
Sbjct: 180 GNNVKPVSFIRDLKKIA-RHFRFGSQEDAHEFLRYTIDAMQKACLNGYARLDRHSQATSL 238
Query: 304 IYECFQGEL--EVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPP 361
+++ F G L V + KN D +D P+L + L++
Sbjct: 239 VHQIFGGYLRSRVTCSVCKNV--------------SDTYD---------PYLDIALEIRN 275
Query: 362 PPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHV---ARMRYRVTRLPKYMILHMR 418
P NI+ + +F GE R A R+ V R + L ++
Sbjct: 276 VP--------NIVCALEMFVKSDVLSGENAYMCARCKKKVPACKRFSVHRESNVLTLSLK 327
Query: 419 RFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG-KPEGG 477
RF N K V +P + L L+ Y+ + + Y L A +VH G G
Sbjct: 328 RFA--NSSGGKITKEVGYP-EFLNLRPYM-----SQRNGVPVMYALYAVLVHSGYSCHAG 379
Query: 478 FYRVFVQRKSEELW 491
Y +V + S W
Sbjct: 380 HYYCYV-KASNGQW 392
>gi|386766198|ref|NP_001247227.1| UBPY ortholog, isoform B [Drosophila melanogaster]
gi|371941032|gb|AEX60474.1| FI18309p1 [Drosophila melanogaster]
gi|383292853|gb|AFH06545.1| UBPY ortholog, isoform B [Drosophila melanogaster]
Length = 367
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 138/316 (43%), Gaps = 34/316 (10%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKS-------PLVHRFGDLTRKI 244
GL N+ T ++N +Q L TP + I + Y++ S ++ L +++
Sbjct: 34 TGLKNLGNTCYMNSILQCLSN-TPQLTEYCISDKYKNYISRSNKTNGQVIEEVAALIKEL 92
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR--NTKKNTS 302
W+ + +K S L+ V+ +K FR Q + EF++ L++ LHSDL+ + +
Sbjct: 93 WNGQ-YKCVASRD--LRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHSDLQTLHVPRQRE 149
Query: 303 IIYECFQGELEVVK---EIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDL 359
+I + LE K + + G ++T K ++ T E+ F L L+L
Sbjct: 150 MISASEKAWLEFTKAKESMILHLFYGQMKSTVKCV--ACHKESATYES----FSNLSLEL 203
Query: 360 PPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRR 419
PP +V + N + ++ ++ G A + +++LP +++H++R
Sbjct: 204 PPN---SNVCQLNQC--MDMYFSGERIHGWNCPSCKTKRDAIKKLDISKLPPVLVVHLKR 258
Query: 420 FT---KNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSK-YDLIANIVHDGKPE 475
F N+ K + FP++NL++ YI E+ + K Y L A H G E
Sbjct: 259 FYADPSNSGSYMKKQNYLRFPLENLDMNPYI---ARAESRAVTPKTYQLYAVSNHYGTME 315
Query: 476 GGFYRVFVQRKSEELW 491
GG Y F + + W
Sbjct: 316 GGHYTAFCKSANYGKW 331
>gi|356535266|ref|XP_003536169.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like isoform 2
[Glycine max]
Length = 931
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 80/183 (43%), Gaps = 17/183 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-------ENYRHCKSPLVHRFGDLTRKI 244
GL N+ T F+N +IQ L+ PL +FL +N + L FGDL RK+
Sbjct: 319 AGLQNLGNTCFMNSSIQCLVHTPPLSEYFLQDYSDEINMDNPLGMRGELALAFGDLLRKL 378
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSII 304
W + + ++P F + + + + F Q + E +++LL+ LH DL K+ I
Sbjct: 379 WSSG--RTAIAPRAFKSKLARFAPQ-FSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 435
Query: 305 YECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLGL 357
+ G + EV E KN ++ ND G + ++ PF+ L L
Sbjct: 436 MKDSDGRPDEEVASECWKNHMARNDSLIVDVCQGQYKSTLVCPVCGKISITFDPFMYLSL 495
Query: 358 DLP 360
LP
Sbjct: 496 PLP 498
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 30/48 (62%)
Query: 400 ARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYI 447
A + + +LP+ ++ H++RF+ + + K T VNFP+ NL+L Y+
Sbjct: 800 ATKKLDLWKLPEILVFHLKRFSYSRYLKNKLDTFVNFPIHNLDLTKYV 847
>gi|426233324|ref|XP_004010667.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Ovis
aries]
Length = 1009
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 140/354 (39%), Gaps = 104/354 (29%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHC-------------KSPLVHRFG 238
GL N+ T ++N +Q L L ++F R+C K + FG
Sbjct: 668 TGLRNLGNTCYMNSILQCLCNTPHLADYF-----NRNCYQDDINRSNLLGHKGEVAEEFG 722
Query: 239 DLTRKIWHARNFKGQ---VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL- 294
+ + +W GQ +SP +F + K + + F Q + E + +L++ LH DL
Sbjct: 723 IIMKALW-----TGQYRYISPKDFKITIGKINDQ-FAGYSQQDSQELLLFLMDGLHEDLN 776
Query: 295 ---------------------------RNTKKNTSIIYECFQGELEVVKEIPKNTISGND 327
++ + N SII FQG+ K+T+
Sbjct: 777 KADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQF-------KSTVQC-- 827
Query: 328 QNTEKGSDGGDDHDNITT-ETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF 386
+T + SR + L LP K ++ + L+ F
Sbjct: 828 ---------------LTCHKKSRTFEAFMYLSLPLASTSKCTLQ----------DCLRLF 862
Query: 387 DGE-TVTEVVRPHVARMRYR--------VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFP 437
E +T+ R + + R R + +LP +++H++RF+ + + +K T V+FP
Sbjct: 863 SKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFP 922
Query: 438 VKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
++NL+L Y+ PK N K KY+L + H G +GG Y + + + + W
Sbjct: 923 LENLDLSQYV--IGPKNNLK---KYNLFSVSNHYGGLDGGHYTAYCKNAARQRW 971
>gi|449508398|ref|XP_002189650.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 1
[Taeniopygia guttata]
Length = 911
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 101/254 (39%), Gaps = 66/254 (25%)
Query: 104 DCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLVCGKYYQGRGQK--SHAYTH 155
+CP+L++V + +K C V NL +ACL Y G G+ H+ TH
Sbjct: 7 NCPHLESVGEITKEELIQKSHGTCQDCKVRGPNL--WACLENKCTYVGCGESHVDHSTTH 64
Query: 156 SLEAGHHVYINLRTEKVYCLPDGYEI--------------------------------ND 183
S E H + +NL T +V+C E+ ++
Sbjct: 65 SQETKHCLTVNLTTLRVWCYACSKEVFLDRKLGSHSPLPSTRLSHQAQENNVQDFKIPSN 124
Query: 184 PSLE----------DIR----------HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP 223
P+L+ DI GL NI T ++N +Q+L PL +FFL
Sbjct: 125 PTLKIPLAAVFDDLDIEVEEDELKTRGLTGLKNIGNTCYMNAALQALSNCPPLTHFFLDC 184
Query: 224 ENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVE 281
R K P + + + L ++WH ++ G V P Q + K FR Q + E
Sbjct: 185 GGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTGLFQGI-KTVNPMFRGYSQQDAQE 242
Query: 282 FMSWLLNTLHSDLR 295
F+ L++ LH +L+
Sbjct: 243 FLRCLMDLLHEELK 256
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 573 KVQKFPEILCIHLKRFRHELMFSTKIGTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 628
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 629 LSVICHHGTASSGHYIAYCRNNLNNLW 655
>gi|426233322|ref|XP_004010666.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Ovis
aries]
Length = 1086
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 140/354 (39%), Gaps = 104/354 (29%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHC-------------KSPLVHRFG 238
GL N+ T ++N +Q L L ++F R+C K + FG
Sbjct: 745 TGLRNLGNTCYMNSILQCLCNTPHLADYF-----NRNCYQDDINRSNLLGHKGEVAEEFG 799
Query: 239 DLTRKIWHARNFKGQ---VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL- 294
+ + +W GQ +SP +F + K + + F Q + E + +L++ LH DL
Sbjct: 800 IIMKALW-----TGQYRYISPKDFKITIGKINDQ-FAGYSQQDSQELLLFLMDGLHEDLN 853
Query: 295 ---------------------------RNTKKNTSIIYECFQGELEVVKEIPKNTISGND 327
++ + N SII FQG+ K+T+
Sbjct: 854 KADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQF-------KSTVQC-- 904
Query: 328 QNTEKGSDGGDDHDNITT-ETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF 386
+T + SR + L LP K ++ + L+ F
Sbjct: 905 ---------------LTCHKKSRTFEAFMYLSLPLASTSKCTLQ----------DCLRLF 939
Query: 387 DGE-TVTEVVRPHVARMRYR--------VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFP 437
E +T+ R + + R R + +LP +++H++RF+ + + +K T V+FP
Sbjct: 940 SKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFP 999
Query: 438 VKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
++NL+L Y+ PK N K KY+L + H G +GG Y + + + + W
Sbjct: 1000 LENLDLSQYV--IGPKNNLK---KYNLFSVSNHYGGLDGGHYTAYCKNAARQRW 1048
>gi|194034734|ref|XP_001927765.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Sus scrofa]
Length = 1117
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 140/354 (39%), Gaps = 104/354 (29%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHC-------------KSPLVHRFG 238
GL N+ T ++N +Q L L ++F R+C K + FG
Sbjct: 776 TGLRNLGNTCYMNSILQCLCNAPHLADYF-----NRNCYQEDINRSNLLGHKGEVAEEFG 830
Query: 239 DLTRKIWHARNFKGQ---VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL- 294
+ + +W GQ +SP +F + K + + F Q + E + +L++ LH DL
Sbjct: 831 IIMKALW-----TGQYRYISPKDFKITIGKINDQ-FAGYSQQDSQELLLFLMDGLHEDLN 884
Query: 295 ---------------------------RNTKKNTSIIYECFQGELEVVKEIPKNTISGND 327
++ + N SII FQG+ K+T+
Sbjct: 885 KADNRKRHKEENNDHLDDFKAAEYAWQKHKQLNESIIVALFQGQF-------KSTVQC-- 935
Query: 328 QNTEKGSDGGDDHDNITT-ETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF 386
+T + SR + L LP K ++ + L+ F
Sbjct: 936 ---------------LTCHKKSRTFEAFMYLSLPLASTSKCTLQ----------DCLRLF 970
Query: 387 DGE-TVTEVVRPHVARMRYR--------VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFP 437
E +T+ R + + R R + +LP +++H++RF+ + + +K T V+FP
Sbjct: 971 SKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFP 1030
Query: 438 VKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
++NL+L Y+ PK N K KY+L + H G +GG Y + + + + W
Sbjct: 1031 LENLDLAQYV--IGPKNNLK---KYNLFSVSNHYGGLDGGHYTAYCKNAARQRW 1079
>gi|395825848|ref|XP_003786132.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Otolemur
garnettii]
Length = 1120
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 126/313 (40%), Gaps = 53/313 (16%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + I A N
Sbjct: 121 AGLHNLGNTCFLNSTIQCLTYTPPLANYLLSREHARSCHQGSFCMLCVMQNHIVQAFANS 180
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL-------HSDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + ++ L + T++
Sbjct: 181 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGYAKLDRQTQATTL 239
Query: 304 IYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPP 362
+++ F G L VK ++S D +D P+L + L++
Sbjct: 240 VHQIFGGYLRSRVKCSVCKSVS-------------DTYD---------PYLDIALEI--- 274
Query: 363 PLFKDVMEKNIIPQVPLF---NILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRR 419
NI+ + LF ++L + + + A R+ + R + L ++R
Sbjct: 275 -----RQAANIVRALELFVKPDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKR 329
Query: 420 FTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG-KPEGGF 478
F NF K V +P + L ++ Y+ +N Y L A +VH G G
Sbjct: 330 FA--NFSGGKITKDVGYP-EFLNIRPYM-----SQNSGEPVMYGLYAVLVHSGYSCHAGH 381
Query: 479 YRVFVQRKSEELW 491
Y +V + S W
Sbjct: 382 YYCYV-KASNGQW 393
>gi|122114651|ref|NP_079366.3| ubiquitin carboxyl-terminal hydrolase 36 [Homo sapiens]
gi|119609940|gb|EAW89534.1| ubiquitin specific peptidase 36, isoform CRA_b [Homo sapiens]
gi|119609941|gb|EAW89535.1| ubiquitin specific peptidase 36, isoform CRA_b [Homo sapiens]
gi|119609942|gb|EAW89536.1| ubiquitin specific peptidase 36, isoform CRA_b [Homo sapiens]
Length = 1123
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 125/313 (39%), Gaps = 53/313 (16%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 240
Query: 304 IYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPP 362
+++ F G L VK ++S D +D P+L + L++
Sbjct: 241 VHQIFGGYLRSRVKCSVCKSVS-------------DTYD---------PYLDVALEI--- 275
Query: 363 PLFKDVMEKNIIPQVPLF---NILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRR 419
NI+ + LF ++L + + + A R+ + R + L ++R
Sbjct: 276 -----RQAANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKR 330
Query: 420 FTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG-KPEGGF 478
F NF K V +P + L ++ Y+ +N Y L A +VH G G
Sbjct: 331 FA--NFSGGKITKDVGYP-EFLNIRPYM-----SQNNGDPVMYGLYAVLVHSGYSCHAGH 382
Query: 479 YRVFVQRKSEELW 491
Y +V + S W
Sbjct: 383 YYCYV-KASNGQW 394
>gi|47940448|gb|AAH71582.1| USP36 protein [Homo sapiens]
Length = 1123
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 125/313 (39%), Gaps = 53/313 (16%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 240
Query: 304 IYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPP 362
+++ F G L VK ++S D +D P+L + L++
Sbjct: 241 VHQIFGGYLRSRVKCSVCKSVS-------------DTYD---------PYLDVALEI--- 275
Query: 363 PLFKDVMEKNIIPQVPLF---NILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRR 419
NI+ + LF ++L + + + A R+ + R + L ++R
Sbjct: 276 -----RQAANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKR 330
Query: 420 FTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG-KPEGGF 478
F NF K V +P + L ++ Y+ +N Y L A +VH G G
Sbjct: 331 FA--NFSGGKITKDVGYP-EFLNIRPYM-----SQNNGDPVMYGLYAVLVHSGYSCHAGH 382
Query: 479 YRVFVQRKSEELW 491
Y +V + S W
Sbjct: 383 YYCYV-KASNGQW 394
>gi|195569249|ref|XP_002102623.1| GD19401 [Drosophila simulans]
gi|194198550|gb|EDX12126.1| GD19401 [Drosophila simulans]
Length = 896
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 136/316 (43%), Gaps = 34/316 (10%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKS-------PLVHRFGDLTRKI 244
GL N+ T ++N +Q L TP + I + Y++ S ++ L +++
Sbjct: 563 TGLKNLGNTCYMNSILQCLSN-TPQLTEYCISDKYKNYISRSNKTNGQVIEEVAALIKEL 621
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR--NTKKNTS 302
W+ + +K S L+ V+ +K FR Q + EF++ L++ LHSDL+ + +
Sbjct: 622 WNGQ-YKCVAS--RDLRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHSDLQTLHVPRQRE 678
Query: 303 IIYECFQGELEVVK---EIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDL 359
+I + LE K + + G ++T K H T S F L L+L
Sbjct: 679 MISASEKAWLEFTKAKESMILHLFYGQMKSTVKCVAC---HKESATYES---FSNLSLEL 732
Query: 360 PPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRR 419
PP +V + N + ++ ++ G A + +++LP +++H++R
Sbjct: 733 PPN---SNVCQLNQC--MDMYFSGERIHGWNCPSCKTKRDAIKKLDISKLPPVLVVHLKR 787
Query: 420 F---TKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSK-YDLIANIVHDGKPE 475
F N+ K + FP++NL++ YI E+ + K Y L A H G E
Sbjct: 788 FYADPSNSGAYMKKQNYLRFPLENLDMNPYI---ARAESRAVTPKTYQLYAVSNHYGTME 844
Query: 476 GGFYRVFVQRKSEELW 491
GG Y F + + W
Sbjct: 845 GGHYTAFCKSANYGKW 860
>gi|195355562|ref|XP_002044260.1| GM15069 [Drosophila sechellia]
gi|194129561|gb|EDW51604.1| GM15069 [Drosophila sechellia]
Length = 896
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 134/316 (42%), Gaps = 34/316 (10%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKS-------PLVHRFGDLTRKI 244
GL N+ T ++N +Q L TP + I + Y++ S ++ L +++
Sbjct: 563 TGLKNLGNTCYMNSILQCLSN-TPQLTEYCISDKYKNYISRSNKTNGQVIEEVAALIKEL 621
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR--NTKKNTS 302
W N + + L+ V+ +K FR Q + EF++ L++ LHSDL+ + +
Sbjct: 622 W---NGQYKCVASRDLRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHSDLQTLHVPRQRE 678
Query: 303 IIYECFQGELEVVK---EIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDL 359
+I + LE K + + G ++T K H T S F L L+L
Sbjct: 679 MISASEKAWLEFTKAKESMILHLFYGQMKSTVKCVAC---HKESATYES---FSNLSLEL 732
Query: 360 PPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRR 419
PP +V + N + ++ ++ G A + +++LP +++H++R
Sbjct: 733 PPN---SNVCQLNQC--MDMYFSGERIHGWNCPSCKTKRDAIKKLDISKLPPVLVVHLKR 787
Query: 420 F---TKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSK-YDLIANIVHDGKPE 475
F N+ K + FP++NL++ YI E+ + K Y L A H G E
Sbjct: 788 FYADPSNSGAYMKKQNYLRFPLENLDMNPYI---ARAESRAVTPKTYQLYAVSNHYGTME 844
Query: 476 GGFYRVFVQRKSEELW 491
GG Y F + + W
Sbjct: 845 GGHYTAFCKSANYGKW 860
>gi|34785787|gb|AAH57482.1| Usp42 protein [Danio rerio]
Length = 985
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 117/311 (37%), Gaps = 49/311 (15%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
GL+N+ T F+N T+Q L PL N+ L E+ + C P + I
Sbjct: 83 AGLHNLGNTCFLNSTLQCLTYTAPLANYMLTREHSKTCHEPGFCMMCTMQNHIIQVFANS 142
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSD------LRNTKKNTSIIY 305
G V + +K K FR G Q + EF+ + ++ + L + T+ ++
Sbjct: 143 GNVIKPISVLNELKRIGKHFRFGSQEDAHEFLRYTVDAMQKSCLPGNKLDRQTQATTFVH 202
Query: 306 ECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPL 364
+ F G L VK + N + SD D P+L + L++
Sbjct: 203 QIFGGYLRSRVKCL----------NCKAVSDTFD------------PYLDISLEIKTAQT 240
Query: 365 FKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPH---VARMRYRVTRLPKYMILHMRRFT 421
E+ + P+ + DG+ + + A R+ V R + + ++RFT
Sbjct: 241 LSKAFEQFVKPE--------QLDGDNAYKCSKCKKMVTASKRFTVHRSSNVLTISLKRFT 292
Query: 422 KNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG-KPEGGFYR 480
NF N + V+ E D P + E Y L A +VH G G Y
Sbjct: 293 --NF----NGGKITKDVRYAEHLDLRPFMSQSHGEP--QIYALYAVLVHSGFSCHAGHYY 344
Query: 481 VFVQRKSEELW 491
+++ + + +
Sbjct: 345 CYIKASNGQWY 355
>gi|28502773|gb|AAH47168.1| Usp42 protein [Danio rerio]
Length = 1016
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 117/311 (37%), Gaps = 49/311 (15%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
GL+N+ T F+N T+Q L PL N+ L E+ + C P + I
Sbjct: 83 AGLHNLGNTCFLNSTLQCLTYTAPLANYMLTREHSKTCHEPGFCMMCTMQNHIIQVFANS 142
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSD------LRNTKKNTSIIY 305
G V + +K K FR G Q + EF+ + ++ + L + T+ ++
Sbjct: 143 GNVIKPISVLNELKRIGKHFRFGSQEDAHEFLRYTVDAMQKSCLPGNKLDRQTQATTFVH 202
Query: 306 ECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPL 364
+ F G L VK + N + SD D P+L + L++
Sbjct: 203 QIFGGYLRSRVKCL----------NCKAVSDTFD------------PYLDISLEIKTAQT 240
Query: 365 FKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPH---VARMRYRVTRLPKYMILHMRRFT 421
E+ + P+ + DG+ + + A R+ V R + + ++RFT
Sbjct: 241 LSKAFEQFVKPE--------QLDGDNAYKCSKCKKMVTASKRFTVHRSSNVLTISLKRFT 292
Query: 422 KNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG-KPEGGFYR 480
NF N + V+ E D P + E Y L A +VH G G Y
Sbjct: 293 --NF----NGGKITKDVRYAEHLDLRPFMSQSHGEP--QIYALYAVLVHSGFSCHAGHYY 344
Query: 481 VFVQRKSEELW 491
+++ + + +
Sbjct: 345 CYIKASNGQWY 355
>gi|189083712|ref|NP_001121110.1| ubiquitin carboxyl-terminal hydrolase 21 [Rattus norvegicus]
gi|226751948|sp|B2GUX4.1|UBP21_RAT RecName: Full=Ubiquitin carboxyl-terminal hydrolase 21; AltName:
Full=Deubiquitinating enzyme 21; AltName: Full=Ubiquitin
thioesterase 21; AltName:
Full=Ubiquitin-specific-processing protease 21
gi|183986536|gb|AAI66443.1| Usp21 protein [Rattus norvegicus]
Length = 565
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 132/339 (38%), Gaps = 70/339 (20%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 211 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 268
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 269 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 326
Query: 303 IIYECFQGELEVVKEIPKNTISGNDQNTE-KGSDGGDDHDNIT------TETSRMPFLML 355
I+ +P G + E + SD DD N+ E S++ L +
Sbjct: 327 IL---------ASGPVPSPPRRGGALHEEPELSD--DDRANLMWKRYLEREDSKIVDLFV 375
Query: 356 G-----------------------LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVT 392
G L LP P + ++ LF ++ + E
Sbjct: 376 GQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEELESENAP 435
Query: 393 EVVRPHVARMRYRVTR------LPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDY 446
R R + R T+ P+ ++LH+ RF+ + ++K+ V+FP++ L L D+
Sbjct: 436 VCDR---CRQKTRSTKKLTVQRFPRILVLHLNRFSTSRGSIKKSSVGVDFPLQRLSLGDF 492
Query: 447 IPLPTPKENEKLRSK-YDLIANIVHDGKPEGGFYRVFVQ 484
++K+ S Y L A H G G Y +
Sbjct: 493 -------ASDKVGSPVYQLYALCNHSGSVHYGHYTALCR 524
>gi|7023072|dbj|BAA91825.1| unnamed protein product [Homo sapiens]
Length = 954
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 125/313 (39%), Gaps = 53/313 (16%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 240
Query: 304 IYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPP 362
+++ F G L VK ++S D +D P+L + L++
Sbjct: 241 VHQIFGGYLRSRVKCSVCKSVS-------------DTYD---------PYLDVALEI--- 275
Query: 363 PLFKDVMEKNIIPQVPLF---NILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRR 419
NI+ + LF ++L + + + A R+ + R + L ++R
Sbjct: 276 -----RQAANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKR 330
Query: 420 FTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG-KPEGGF 478
F NF K V +P + L ++ Y+ +N Y L A +VH G G
Sbjct: 331 FA--NFSGGKITKDVGYP-EFLNIRPYM-----SQNNGDPVMYGLYAVLVHSGYSCHAGH 382
Query: 479 YRVFVQRKSEELW 491
Y +V + S W
Sbjct: 383 YYCYV-KASNGQW 394
>gi|168270556|dbj|BAG10071.1| ubiquitin carboxyl-terminal hydrolase 36 [synthetic construct]
Length = 1121
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 125/313 (39%), Gaps = 53/313 (16%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 240
Query: 304 IYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPP 362
+++ F G L VK ++S D +D P+L + L++
Sbjct: 241 VHQIFGGYLRSRVKCSVCKSVS-------------DTYD---------PYLDVALEI--- 275
Query: 363 PLFKDVMEKNIIPQVPLF---NILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRR 419
NI+ + LF ++L + + + A R+ + R + L ++R
Sbjct: 276 -----RQAANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKR 330
Query: 420 FTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG-KPEGGF 478
F NF K V +P + L ++ Y+ +N Y L A +VH G G
Sbjct: 331 FA--NFSGGKITKDVGYP-EFLNIRPYM-----SQNNGDPVMYGLYAVLVHSGYSCHAGH 382
Query: 479 YRVFVQRKSEELW 491
Y +V + S W
Sbjct: 383 YYCYV-KASNGQW 394
>gi|402901257|ref|XP_003913570.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Papio anubis]
Length = 1123
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 123/306 (40%), Gaps = 52/306 (16%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 240
Query: 304 IYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPP 362
+++ F G L VK ++S D +D P+L + L++
Sbjct: 241 VHQIFGGYLRSRVKCSMCKSVS-------------DTYD---------PYLDVALEI--- 275
Query: 363 PLFKDVMEKNIIPQVPLF---NILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRR 419
NI+ + LF ++L + + + A R+ + R + L ++R
Sbjct: 276 -----RQAANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKR 330
Query: 420 FTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG-KPEGGF 478
F NF K V +P + L ++ Y+ +N Y L A +VH G G
Sbjct: 331 FA--NFSGGKITKDVGYP-EFLNIRPYM-----SQNNGDPVMYGLYAVLVHSGYSCHAGH 382
Query: 479 YRVFVQ 484
Y +V+
Sbjct: 383 YYCYVK 388
>gi|390463858|ref|XP_003733115.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 36 [Callithrix jacchus]
Length = 1124
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 122/306 (39%), Gaps = 52/306 (16%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F N TIQ L PL N+ L E+ R C + I A N
Sbjct: 121 AGLHNLGNTCFFNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIVQAFANS 180
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 181 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 239
Query: 304 IYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPP 362
+++ F G L VK ++S D +D P+L + L++
Sbjct: 240 VHQIFGGYLRSRVKCSMCKSVS-------------DTYD---------PYLDIALEI--- 274
Query: 363 PLFKDVMEKNIIPQVPLF---NILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRR 419
NI+ + LF ++L + + + A R+ + R + L ++R
Sbjct: 275 -----RQAANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKR 329
Query: 420 FTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG-KPEGGF 478
F NF K V +P + L ++ Y+ +N Y L A +VH G G
Sbjct: 330 FA--NFSGGKITKDVGYP-EFLNMRPYM-----SQNNGDPVMYGLYAVLVHSGYSCHAGH 381
Query: 479 YRVFVQ 484
Y +V+
Sbjct: 382 YYCYVK 387
>gi|7959165|dbj|BAA95977.1| KIAA1453 protein [Homo sapiens]
Length = 1123
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 125/313 (39%), Gaps = 53/313 (16%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + I A N
Sbjct: 124 AGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIVQAFANS 183
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 184 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 242
Query: 304 IYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPP 362
+++ F G L VK ++S D +D P+L + L++
Sbjct: 243 VHQIFGGYLRSRVKCSVCKSVS-------------DTYD---------PYLDVALEI--- 277
Query: 363 PLFKDVMEKNIIPQVPLF---NILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRR 419
NI+ + LF ++L + + + A R+ + R + L ++R
Sbjct: 278 -----RQAANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKR 332
Query: 420 FTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG-KPEGGF 478
F NF K V +P + L ++ Y+ +N Y L A +VH G G
Sbjct: 333 FA--NFSGGKITKDVGYP-EFLNIRPYM-----SQNNGDPVMYGLYAVLVHSGYSCHAGH 384
Query: 479 YRVFVQRKSEELW 491
Y +V + S W
Sbjct: 385 YYCYV-KASNGQW 396
>gi|409040949|gb|EKM50435.1| hypothetical protein PHACADRAFT_129620 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1312
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI--------PENYRHCKSPLVHRFGDLTRK 243
+GL N+ T F+N IQ L+ L ++FL P+N + FG L RK
Sbjct: 409 LGLGNMGNTCFMNSAIQCLVHTPELADYFLTGVFEKELNPDNPLGMHGQIAQAFGALLRK 468
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
IW + SP EF +AV+ +F Q + E +++LL+ LH DL
Sbjct: 469 IWAPTSSATSYSPREF-KAVLSKFAPQFSGYQQHDSQELVAFLLDGLHEDL 518
>gi|395503242|ref|XP_003755979.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2
[Sarcophilus harrisii]
Length = 1069
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 150/384 (39%), Gaps = 105/384 (27%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI+ S IR++ GL N+ T ++N +Q L
Sbjct: 693 RENKPACYPKA-EISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 751
Query: 216 L-----RNFF---LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ---VSPHEFLQAVM 264
L RNF+ + N K + FG + + +W GQ +SP +F +
Sbjct: 752 LADYFNRNFYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDFKITIG 806
Query: 265 KASKKRFRIGVQSNPVEFMSWLLNTLHSDL----------------------------RN 296
K + + F Q + E + +L++ LH DL ++
Sbjct: 807 KINDQ-FSGYSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEHAWQKH 865
Query: 297 TKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLG 356
+ N SII FQG+ K+T+ + SR +
Sbjct: 866 KQLNESIIVALFQGQF-------KSTVQCL----------------TCHKKSRTFEAFMY 902
Query: 357 LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR--------VT 407
L LP K ++ + L+ F E +T+ R + + + R +
Sbjct: 903 LSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCKTRRDSMKKIEIW 952
Query: 408 RLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIAN 467
+LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK N K +Y+L +
Sbjct: 953 KLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNNLK---RYNLFSV 1007
Query: 468 IVHDGKPEGGFYRVFVQRKSEELW 491
H G +GG Y + + + + W
Sbjct: 1008 SNHYGGLDGGHYTAYCKNAARQRW 1031
>gi|48257066|gb|AAH03130.2| USP21 protein, partial [Homo sapiens]
Length = 477
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 125/340 (36%), Gaps = 72/340 (21%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 123 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 180
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 181 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 238
Query: 303 IIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNIT------TETSRMPFLMLG 356
I+ +P G E+ DD N+ E S++ L +G
Sbjct: 239 ILAN---------GPVPSPPRRGGAL-LEEPELSDDDRANLMWKRYLEREDSKIVDLFVG 288
Query: 357 -----------------------LDLPPPPLFKDVMEKNIIPQVPLFNILKK---FDGET 390
L LP P K + FN+ K + E
Sbjct: 289 QLKSCLKCQACGYRSTTFEVFCDLSLPIP---KKGFAGGKVSLRDCFNLFTKEEELESEN 345
Query: 391 VTEVVRPHVARMRYRVTR------LPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELK 444
R R + R T+ P+ ++LH+ RF+ + ++K+ V+FP++ L L
Sbjct: 346 APVCDR---CRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKKSSVGVDFPLQRLSLG 402
Query: 445 DYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQ 484
D+ ++ Y L A H G G Y +
Sbjct: 403 DF------ASDKAGSPVYQLYALCNHSGSVHYGHYTALCR 436
>gi|348553563|ref|XP_003462596.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11-like isoform 2
[Cavia porcellus]
Length = 929
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 4/118 (3%)
Query: 377 VPLFNILKKFDGET---VTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTL 433
+ LF ++ + E + + +A + + LP+ +I+H++RF+ + F EK TL
Sbjct: 752 IELFTTVETLEKENPWYCSSCKQHQLATKKLDLWMLPEILIIHLKRFSFSKFSHEKLDTL 811
Query: 434 VNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
V+FP+++L+ +++ P + +L KYDLIA H G G Y F K W
Sbjct: 812 VHFPIRDLDFSEFVIKPQNESAPELY-KYDLIAVSNHYGGIRDGHYTTFACNKDSGQW 868
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 85/204 (41%), Gaps = 24/204 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPE-NYRH---CKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L V L +FL + E N+R+ + L + DL ++
Sbjct: 260 CGLTNLGNTCFMNSALQCLSNVPQLTEYFLDNRYLEELNFRNPLGMRGELAEAYADLVKQ 319
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
W + + P+ F V + + + F Q + E +S+LL+ LH DL KK +
Sbjct: 320 TWSGCH--RSIVPNVFKNKVGRFASQ-FLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYV 376
Query: 304 IYECFQG--ELEVVKEIPKNTISGND-------QNTEKGSDGGDDHDNITTETSRMPFLM 354
G + EV +E +N ND K + D N++ PF
Sbjct: 377 ELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFD--PFCY 434
Query: 355 LGLDLPPPPLFKDVMEKNIIPQVP 378
L +P P K V+E +P P
Sbjct: 435 LS--VPLPVCHKRVLEVFFVPMDP 456
>gi|124056592|sp|Q9P275.3|UBP36_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Ubiquitin
thioesterase 36; AltName:
Full=Ubiquitin-specific-processing protease 36
Length = 1121
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 125/313 (39%), Gaps = 53/313 (16%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 240
Query: 304 IYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPP 362
+++ F G L VK ++S D +D P+L + L++
Sbjct: 241 VHQIFGGYLRSRVKCSVCKSVS-------------DTYD---------PYLDVALEI--- 275
Query: 363 PLFKDVMEKNIIPQVPLF---NILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRR 419
NI+ + LF ++L + + + A R+ + R + L ++R
Sbjct: 276 -----RQAANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKR 330
Query: 420 FTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG-KPEGGF 478
F NF K V +P + L ++ Y+ +N Y L A +VH G G
Sbjct: 331 FA--NFSGGKITKDVGYP-EFLNIRPYM-----SQNNGDPVMYGLYAVLVHSGYSCHAGH 382
Query: 479 YRVFVQRKSEELW 491
Y +V + S W
Sbjct: 383 YYCYV-KASNGQW 394
>gi|348553561|ref|XP_003462595.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11-like isoform 1
[Cavia porcellus]
Length = 956
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 4/118 (3%)
Query: 377 VPLFNILKKFDGET---VTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTL 433
+ LF ++ + E + + +A + + LP+ +I+H++RF+ + F EK TL
Sbjct: 779 IELFTTVETLEKENPWYCSSCKQHQLATKKLDLWMLPEILIIHLKRFSFSKFSHEKLDTL 838
Query: 434 VNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
V+FP+++L+ +++ P + +L KYDLIA H G G Y F K W
Sbjct: 839 VHFPIRDLDFSEFVIKPQNESAPELY-KYDLIAVSNHYGGIRDGHYTTFACNKDSGQW 895
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 85/204 (41%), Gaps = 24/204 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPE-NYRH---CKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L V L +FL + E N+R+ + L + DL ++
Sbjct: 300 CGLTNLGNTCFMNSALQCLSNVPQLTEYFLDNRYLEELNFRNPLGMRGELAEAYADLVKQ 359
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
W + + P+ F V + + + F Q + E +S+LL+ LH DL KK +
Sbjct: 360 TWSGCH--RSIVPNVFKNKVGRFASQ-FLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYV 416
Query: 304 IYECFQG--ELEVVKEIPKNTISGND-------QNTEKGSDGGDDHDNITTETSRMPFLM 354
G + EV +E +N ND K + D N++ PF
Sbjct: 417 ELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFD--PFCY 474
Query: 355 LGLDLPPPPLFKDVMEKNIIPQVP 378
L +P P K V+E +P P
Sbjct: 475 LS--VPLPVCHKRVLEVFFVPMDP 496
>gi|338716960|ref|XP_003363554.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Equus caballus]
Length = 1011
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 148/384 (38%), Gaps = 117/384 (30%)
Query: 176 PDGY---EINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTPLRNFF 220
P GY EI S IR++ GL N+ T ++N +Q L L ++F
Sbjct: 639 PTGYPKAEITRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYF 698
Query: 221 LIPENYRHC-------------KSPLVHRFGDLTRKIWHARNFKGQ---VSPHEFLQAVM 264
R+C K + FG + + +W GQ +SP +F +
Sbjct: 699 -----NRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDFKITIG 748
Query: 265 KASKKRFRIGVQSNPVEFMSWLLNTLHSDL----------------------------RN 296
K + + F Q + E + +L++ LH DL ++
Sbjct: 749 KINDQ-FAGYSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEHAWQKH 807
Query: 297 TKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLG 356
+ N SII FQG+ K+T+ + SR +
Sbjct: 808 KQLNESIIVALFQGQF-------KSTVQCL----------------TCHKKSRTFEAFMY 844
Query: 357 LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR--------VT 407
L LP K ++ + L+ F E +T+ R + + R R +
Sbjct: 845 LSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIW 894
Query: 408 RLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIAN 467
+LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK N K KY+L +
Sbjct: 895 KLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNNLK---KYNLFSV 949
Query: 468 IVHDGKPEGGFYRVFVQRKSEELW 491
H G +GG Y + + + + W
Sbjct: 950 SNHYGGLDGGHYTAYCKNAARQRW 973
>gi|115497674|ref|NP_001069594.1| ubiquitin carboxyl-terminal hydrolase 8 [Bos taurus]
gi|113911783|gb|AAI22572.1| Ubiquitin specific peptidase 8 [Bos taurus]
gi|296483106|tpg|DAA25221.1| TPA: ubiquitin specific peptidase 8 [Bos taurus]
Length = 1085
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 138/353 (39%), Gaps = 102/353 (28%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHC-------------KSPLVHRFG 238
GL N+ T ++N +Q L L ++F R+C K + FG
Sbjct: 744 TGLRNLGNTCYMNSILQCLCNTPHLADYF-----NRNCYQDDINRSNLLGHKGEVAEEFG 798
Query: 239 DLTRKIWHARNFKGQ---VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL- 294
+ + +W GQ +SP +F + K + + F Q + E + +L++ LH DL
Sbjct: 799 IIMKALW-----TGQYRYISPKDFKITIGKINDQ-FAGYSQQDSQELLLFLMDGLHEDLN 852
Query: 295 ---------------------------RNTKKNTSIIYECFQGELEVVKEIPKNTISGND 327
++ + N SII FQG+ K+T+
Sbjct: 853 KADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQF-------KSTVQCL- 904
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD 387
+ SR + L LP K ++ + L+ F
Sbjct: 905 ---------------TCHKKSRTFEAFMYLSLPLASTSKCTLQ----------DCLRLFS 939
Query: 388 GE-TVTEVVRPHVARMRYR--------VTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPV 438
E +T+ R + + R R + +LP +++H++RF+ + + +K T V+FP+
Sbjct: 940 KEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 999
Query: 439 KNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+NL+L Y+ PK N K KY+L + H G +GG Y + + + + W
Sbjct: 1000 ENLDLSQYV--IGPKNNLK---KYNLFSVSNHYGGLDGGHYTAYCKNAARQRW 1047
>gi|225462100|ref|XP_002271760.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like [Vitis
vinifera]
Length = 631
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 128/310 (41%), Gaps = 50/310 (16%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHR----FGDLTRKIWHA 247
+GL N+ + ++N +Q L PL NF L + C S + + F L ++I +
Sbjct: 18 LGLKNLGNSCYLNSVLQCLTYTPPLANFCLNHLHSSLCDSAVDRKRECPFCILEKRIVRS 77
Query: 248 RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-------- 299
+ +Q+ ++ + FR+G Q + EF+ ++++ H+ KK
Sbjct: 78 LSMDLTQDAPSKIQSCLRIFAEHFRLGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGNND 137
Query: 300 ----NTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLML 355
TS++ + F G L Q+ K G + N T E + +
Sbjct: 138 NGPSTTSVVKDIFGGAL---------------QSQVKCLSCGAE-SNKTDE-----IMDI 176
Query: 356 GLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMIL 415
LD+ K ++ P+V N K+ + ++V AR + + + P +++
Sbjct: 177 SLDVLHFNSLKQALQNFFQPEVLDGN--NKYKCDNCKKLVS---ARKQMSILQAPNVLVI 231
Query: 416 HMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG-KP 474
++RF + K L+ F + L L Y+ K ++ +Y+L A IVH G P
Sbjct: 232 QLKRF--EGLYGGKIDKLIAFE-EVLVLSSYMN----KASQDSHPEYNLFATIVHSGYSP 284
Query: 475 EGGFYRVFVQ 484
E G Y +++
Sbjct: 285 ESGHYYAYIK 294
>gi|149691949|ref|XP_001501973.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Equus
caballus]
Length = 1117
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 150/385 (38%), Gaps = 119/385 (30%)
Query: 176 PDGY---EINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTPLRNFF 220
P GY EI S IR++ GL N+ T ++N +Q L L ++F
Sbjct: 745 PTGYPKAEITRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYF 804
Query: 221 LIPENYRHC-------------KSPLVHRFGDLTRKIWHARNFKGQ---VSPHEFLQAVM 264
R+C K + FG + + +W GQ +SP +F +
Sbjct: 805 -----NRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDFKITIG 854
Query: 265 KASKKRFRIGVQSNPVEFMSWLLNTLHSDL----------------------------RN 296
K + +F Q + E + +L++ LH DL ++
Sbjct: 855 KIND-QFAGYSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEHAWQKH 913
Query: 297 TKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITT-ETSRMPFLML 355
+ N SII FQG+ K+T+ +T + SR +
Sbjct: 914 KQLNESIIVALFQGQF-------KSTVQC-----------------LTCHKKSRTFEAFM 949
Query: 356 GLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR--------V 406
L LP K ++ + L+ F E +T+ R + + R R +
Sbjct: 950 YLSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEI 999
Query: 407 TRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIA 466
+LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK N K KY+L +
Sbjct: 1000 WKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNNLK---KYNLFS 1054
Query: 467 NIVHDGKPEGGFYRVFVQRKSEELW 491
H G +GG Y + + + + W
Sbjct: 1055 VSNHYGGLDGGHYTAYCKNAARQRW 1079
>gi|145530694|ref|XP_001451119.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124418763|emb|CAK83722.1| unnamed protein product [Paramecium tetraurelia]
Length = 496
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 130/307 (42%), Gaps = 55/307 (17%)
Query: 186 LEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIW 245
+++I+ VGL N ++N +Q LM + L +F L +Y + L +K
Sbjct: 198 VKEIQIVGLENENYFCYLNSVLQCLMGIRQLNHFLLY--SYNQEVQLFTQAYTFLLKKA- 254
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIY 305
+ +++KG+VSP+E ++K +K F I + ++ L+N + T+ I
Sbjct: 255 NKKHYKGRVSPNE----LIKILEKHFSI-----------YEMHDKELSLKNQLQTTTFID 299
Query: 306 ECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLF 365
E FQG++ + P + N T + F DL P L
Sbjct: 300 ELFQGQITSFMKCP--------------------YCNKTITHQEVYF-----DLSLPLLS 334
Query: 366 KDVMEKNIIPQVPLFNILKK--FDGETVTEVVRPHVARMR--YRVTRLPKYMILHMRRFT 421
K +++ + L N K+ DGE V ++ +++ P +ILH++RF
Sbjct: 335 KSFIQRKLTINECLSNYFKEEIIDGEWRCSVCNQQSKNIKRGIKISSAPNILILHLKRF- 393
Query: 422 KNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRV 481
+N +K VN ++ + +K+Y +KYDL A IVH G + G Y
Sbjct: 394 QNYPLKKKIKEPVNIDME-INIKNYCCTDITD------TKYDLSAMIVHSGTIDEGHYVA 446
Query: 482 FVQRKSE 488
V+R +
Sbjct: 447 VVKRNQQ 453
>gi|21483568|gb|AAM52759.1| SD04548p [Drosophila melanogaster]
Length = 896
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 133/321 (41%), Gaps = 44/321 (13%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKS-------PLVHRFGDLTRKI 244
GL N+ T ++N +Q L TP + I + Y++ S ++ L +++
Sbjct: 563 TGLKNLGNTCYMNSILQCLSN-TPQLTEYCISDKYKNYISRSNKTNGQVIEEVAALIKEL 621
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR--NTKKNTS 302
W N + + L+ V+ +K FR Q + EF++ L++ LHSDL+ + +
Sbjct: 622 W---NGQYKCVASRDLRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHSDLQTLHVPRQRE 678
Query: 303 IIYECFQGELEVVK---EIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDL 359
+I + LE K + + G ++T K H T S F L L+L
Sbjct: 679 MISASEKAWLEFTKAKESMILHLFYGQMKSTVKCVAC---HKESATYES---FSNLSLEL 732
Query: 360 PPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHV-----ARMRYRVTRLPKYMI 414
PP N+ ++ F GE + P A + +++LP ++
Sbjct: 733 PP--------NSNVCQLNQCMDMY--FSGERIHGWKCPSCKTKRDAIKKLDISKLPPVLV 782
Query: 415 LHMRRF---TKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSK-YDLIANIVH 470
+H++RF N+ K + FP++NL++ YI E+ + K Y L A H
Sbjct: 783 VHLKRFYADPSNSGSYMKKQNYLRFPLENLDMNPYI---ARAESRAVTPKTYQLYAVSNH 839
Query: 471 DGKPEGGFYRVFVQRKSEELW 491
G EGG Y F + + W
Sbjct: 840 YGTMEGGHYTAFCKSANYGKW 860
>gi|11414862|dbj|BAB18534.1| deubiquitinating enzyme UBPY [Mus musculus]
Length = 1080
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 153/376 (40%), Gaps = 89/376 (23%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI+ S IR++ GL N+ T ++N +Q L
Sbjct: 704 RENKPPCYPKA-EISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 762
Query: 216 LRNFFLIPENYRHC-------------KSPLVHRFGDLTRKIWHARNFKGQ---VSPHEF 259
L ++F R+C K + FG + + +W GQ +SP +F
Sbjct: 763 LADYF-----NRNCYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDF 812
Query: 260 LQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-------RNTKKNTSIIYECFQGE- 311
+ K + + F Q + E + L++ LH DL R+ ++N + E G
Sbjct: 813 KVTIGKINDQ-FAGSSQQDSQELLLSLMDGLHEDLNKADNRKRHKEENNEHLDEPAGGRA 871
Query: 312 -LEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM------PFLMLGLDLPPPPL 364
L+ K++ ++ I Q K + + T R F+ L L L
Sbjct: 872 RLQKHKQLNESIIRLLFQGQFKAT--------VQCLTCRRRSRTFEAFMYLSLPLAS--- 920
Query: 365 FKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR--------VTRLPKYMIL 415
+ L + L+ F E +T+ R + + R R + +LP +++
Sbjct: 921 ---------TSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLV 971
Query: 416 HMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPE 475
H++RF+ + + +K T V+FP++NL+L Y+ PK + K KY+L + H G +
Sbjct: 972 HLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNSLK---KYNLFSVSNHYGGLD 1026
Query: 476 GGFYRVFVQRKSEELW 491
GG Y + + + + W
Sbjct: 1027 GGHYTAYCKNAARQRW 1042
>gi|296086774|emb|CBI32923.3| unnamed protein product [Vitis vinifera]
Length = 635
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 128/310 (41%), Gaps = 50/310 (16%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHR----FGDLTRKIWHA 247
+GL N+ + ++N +Q L PL NF L + C S + + F L ++I +
Sbjct: 22 LGLKNLGNSCYLNSVLQCLTYTPPLANFCLNHLHSSLCDSAVDRKRECPFCILEKRIVRS 81
Query: 248 RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-------- 299
+ +Q+ ++ + FR+G Q + EF+ ++++ H+ KK
Sbjct: 82 LSMDLTQDAPSKIQSCLRIFAEHFRLGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGNND 141
Query: 300 ----NTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLML 355
TS++ + F G L Q+ K G + N T E + +
Sbjct: 142 NGPSTTSVVKDIFGGAL---------------QSQVKCLSCGAE-SNKTDE-----IMDI 180
Query: 356 GLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMIL 415
LD+ K ++ P+V N K+ + ++V AR + + + P +++
Sbjct: 181 SLDVLHFNSLKQALQNFFQPEVLDGN--NKYKCDNCKKLVS---ARKQMSILQAPNVLVI 235
Query: 416 HMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG-KP 474
++RF + K L+ F + L L Y+ K ++ +Y+L A IVH G P
Sbjct: 236 QLKRF--EGLYGGKIDKLIAFE-EVLVLSSYMN----KASQDSHPEYNLFATIVHSGYSP 288
Query: 475 EGGFYRVFVQ 484
E G Y +++
Sbjct: 289 ESGHYYAYIK 298
>gi|28571791|ref|NP_650948.2| UBPY ortholog, isoform A [Drosophila melanogaster]
gi|28381390|gb|AAF55858.2| UBPY ortholog, isoform A [Drosophila melanogaster]
gi|384551736|gb|AFH97157.1| FI20021p1 [Drosophila melanogaster]
Length = 896
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 136/316 (43%), Gaps = 34/316 (10%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKS-------PLVHRFGDLTRKI 244
GL N+ T ++N +Q L TP + I + Y++ S ++ L +++
Sbjct: 563 TGLKNLGNTCYMNSILQCLSN-TPQLTEYCISDKYKNYISRSNKTNGQVIEEVAALIKEL 621
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR--NTKKNTS 302
W+ + +K S L+ V+ +K FR Q + EF++ L++ LHSDL+ + +
Sbjct: 622 WNGQ-YKCVAS--RDLRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHSDLQTLHVPRQRE 678
Query: 303 IIYECFQGELEVVK---EIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDL 359
+I + LE K + + G ++T K H T S F L L+L
Sbjct: 679 MISASEKAWLEFTKAKESMILHLFYGQMKSTVKCVAC---HKESATYES---FSNLSLEL 732
Query: 360 PPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRR 419
PP +V + N + ++ ++ G A + +++LP +++H++R
Sbjct: 733 PPN---SNVCQLNQC--MDMYFSGERIHGWNCPSCKTKRDAIKKLDISKLPPVLVVHLKR 787
Query: 420 F---TKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSK-YDLIANIVHDGKPE 475
F N+ K + FP++NL++ YI E+ + K Y L A H G E
Sbjct: 788 FYADPSNSGSYMKKQNYLRFPLENLDMNPYI---ARAESRAVTPKTYQLYAVSNHYGTME 844
Query: 476 GGFYRVFVQRKSEELW 491
GG Y F + + W
Sbjct: 845 GGHYTAFCKSANYGKW 860
>gi|297701928|ref|XP_002827948.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Pongo abelii]
Length = 1124
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 123/306 (40%), Gaps = 52/306 (16%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + I A N
Sbjct: 123 AGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIVQAFANS 182
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 183 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 241
Query: 304 IYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPP 362
+++ F G L VK ++S D +D P+L + L++
Sbjct: 242 VHQIFGGYLRSRVKCSMCKSVS-------------DTYD---------PYLDVALEI--- 276
Query: 363 PLFKDVMEKNIIPQVPLF---NILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRR 419
NI+ + LF ++L + + + A R+ + R + L ++R
Sbjct: 277 -----RQAANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKR 331
Query: 420 FTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG-KPEGGF 478
F NF K V +P + L ++ Y+ +N Y L A +VH G G
Sbjct: 332 FA--NFSGGKITKDVGYP-EFLNIRPYM-----SQNNGDPVMYGLYAVLVHSGYSCHAGH 383
Query: 479 YRVFVQ 484
Y +V+
Sbjct: 384 YYCYVK 389
>gi|66820851|ref|XP_643982.1| peptidase C19 family protein [Dictyostelium discoideum AX4]
gi|60472353|gb|EAL70306.1| peptidase C19 family protein [Dictyostelium discoideum AX4]
Length = 919
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 124/312 (39%), Gaps = 50/312 (16%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKG 252
GLNN+ T F+N +Q L PL NF + E+ R C++ F L ++ + G
Sbjct: 235 GLNNVGNTCFMNSVLQCLTYTVPLANFMMSREHSRQCQASGFCIFCSLETQVLQSHKCGG 294
Query: 253 Q-VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH---------SDLRNTKKNTS 302
+ ++P E + K + FRIG Q + EF+ +++ +L + + T+
Sbjct: 295 KSITPKEIASNIRKIA-PTFRIGRQEDSHEFIRFMIESLQKVSLSKYPKGSINHRDAMTT 353
Query: 303 IIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPP 362
+I F G L + + N + PF+ L +D+
Sbjct: 354 VIGSIFGGYLRSQVKCSQCQYESNTYD---------------------PFMDLCVDINQA 392
Query: 363 PLFKDVMEKNIIPQVP--LFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRF 420
D + K + V L + K+ ++V+ A+ R ++ P + ++RF
Sbjct: 393 ----DSLTKGLTNFVKSELLDGSNKYKCSKCKKLVK---AQKRLQIHIAPPILTCQIKRF 445
Query: 421 TKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVH-DGKPEGGFY 479
+ F+ +N ++ + + P T N + YDL A +VH G G Y
Sbjct: 446 S----FLGSYGGKINRQIQFDQSLNLSPFMTQSNNHSI---YDLYAVLVHLGGSTSSGHY 498
Query: 480 RVFVQRKSEELW 491
+V + S +W
Sbjct: 499 YCYV-KGSNGIW 509
>gi|395503240|ref|XP_003755978.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1
[Sarcophilus harrisii]
Length = 1100
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 150/384 (39%), Gaps = 105/384 (27%)
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV------------GLNNIKETDFVNVTIQSLMRVTP 215
R K C P EI+ S IR++ GL N+ T ++N +Q L
Sbjct: 724 RENKPACYPKA-EISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPH 782
Query: 216 L-----RNFF---LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ---VSPHEFLQAVM 264
L RNF+ + N K + FG + + +W GQ +SP +F +
Sbjct: 783 LADYFNRNFYQDDINRSNLLGHKGEVAEEFGIIMKALW-----TGQYRYISPKDFKITIG 837
Query: 265 KASKKRFRIGVQSNPVEFMSWLLNTLHSDL----------------------------RN 296
K + +F Q + E + +L++ LH DL ++
Sbjct: 838 KIND-QFSGYSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEHAWQKH 896
Query: 297 TKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLG 356
+ N SII FQG+ K+T+ + SR +
Sbjct: 897 KQLNESIIVALFQGQF-------KSTVQCL----------------TCHKKSRTFEAFMY 933
Query: 357 LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE-TVTEVVRPHVARMRYR--------VT 407
L LP K ++ + L+ F E +T+ R + + + R +
Sbjct: 934 LSLPLASTSKCTLQ----------DCLRLFSKEEKLTDNNRFYCSHCKTRRDSMKKIEIW 983
Query: 408 RLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIAN 467
+LP +++H++RF+ + + +K T V+FP++NL+L Y+ PK N K +Y+L +
Sbjct: 984 KLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYV--IGPKNNLK---RYNLFSV 1038
Query: 468 IVHDGKPEGGFYRVFVQRKSEELW 491
H G +GG Y + + + + W
Sbjct: 1039 SNHYGGLDGGHYTAYCKNAARQRW 1062
>gi|449275838|gb|EMC84595.1| Ubiquitin carboxyl-terminal hydrolase 33 [Columba livia]
Length = 911
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 99/254 (38%), Gaps = 66/254 (25%)
Query: 104 DCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLVCGKYYQGRGQK--SHAYTH 155
+CP+L++V + +K C V NL +ACL Y G G+ H+ TH
Sbjct: 7 NCPHLESVGEITKEELIQKSHGTCQDCKVRGPNL--WACLENRCTYVGCGESYVDHSTTH 64
Query: 156 SLEAGHHVYINLRTEKVYC------------------LPDG------------------- 178
S E H + +NL T +V+C LP+
Sbjct: 65 SQETKHCLTVNLTTLRVWCYACSKEVFLDRKLRSHSPLPNARLSHHAQENSVQDFKIPSN 124
Query: 179 ---------------YEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP 223
E+ + L+ GL NI T ++N +Q+L PL +FFL
Sbjct: 125 PTLKIPLAAVFDDLDIEVEEDELKTRGLTGLKNIGNTCYMNAALQALSNCPPLTHFFLDC 184
Query: 224 ENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVE 281
R K P + + + L ++WH ++ G V P Q + K FR Q + E
Sbjct: 185 GGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTGLFQGI-KTVNPTFRGYSQQDAQE 242
Query: 282 FMSWLLNTLHSDLR 295
F+ L++ LH +L+
Sbjct: 243 FLRCLMDLLHEELK 256
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V + P+ + +H++RF F K T V+FP++ L+L+ ++ +P + YDL
Sbjct: 573 KVQKFPEILCIHLKRFRHELMFSTKIGTHVSFPLEGLDLQPFLAKDSPAQ----IVTYDL 628
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + + LW
Sbjct: 629 LSVICHHGTASSGHYIAYCRNNLNNLW 655
>gi|197099624|ref|NP_001125307.1| ubiquitin carboxyl-terminal hydrolase 4 [Pongo abelii]
gi|75055118|sp|Q5RCD3.1|UBP4_PONAB RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; AltName: Full=Ubiquitin
thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4
gi|55727639|emb|CAH90574.1| hypothetical protein [Pongo abelii]
Length = 963
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 88/203 (43%), Gaps = 22/203 (10%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL ++FL E N K + + +L ++
Sbjct: 302 CGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 361
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 362 MWSGRD--AHVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
Query: 304 IYECFQGELEVV--KEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G +VV KE +N ND G + E +++ PF L
Sbjct: 419 ELKDANGRPDVVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 478
Query: 357 LDLPPPPLFKD-VMEKNIIPQVP 378
L P PL KD VME ++P P
Sbjct: 479 L---PLPLKKDRVMEVFLVPADP 498
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 409 LPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSK-YDLIAN 467
LPK +++H++RF+ N ++ +K T+V FP++ L + +++ N R YDLIA
Sbjct: 817 LPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVC------NLSARPYVYDLIAV 870
Query: 468 IVHDGKPEGGFYRVFVQRKSEELW 491
H G G Y + + K W
Sbjct: 871 SNHYGAMGVGHYTAYAKNKLNGKW 894
>gi|194899564|ref|XP_001979329.1| GG24410 [Drosophila erecta]
gi|190651032|gb|EDV48287.1| GG24410 [Drosophila erecta]
Length = 895
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 133/320 (41%), Gaps = 42/320 (13%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKS-------PLVHRFGDLTRKI 244
GL N+ T ++N +Q L TP + I + Y++ S ++ L +++
Sbjct: 562 TGLKNLGNTCYMNSILQCLSN-TPQLTEYCISDKYKNYISRSNKTNGQVIEEVAALIKEL 620
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR--NTKKNTS 302
W N + + L+ V+ +K FR Q + EF++ L++ LHSDL+ + +
Sbjct: 621 W---NGQYKCVASRDLRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHSDLQTLHVPRQRE 677
Query: 303 IIYECFQGELEVVK---EIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDL 359
+I + LE K + + G ++T K H T S F L L+L
Sbjct: 678 MISASEKAWLEFTKAKESMILHLFYGQMKSTVKCVAC---HKESATYES---FSNLSLEL 731
Query: 360 PPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRR 419
PP +V + N + ++ ++ G A + +++LP +++H++R
Sbjct: 732 PPN---SNVCQLNQC--MDMYFSGERIHGWNCPSCKTKRDAIKKLDISKLPPVLVVHLKR 786
Query: 420 F---TKNNFFVEKNPTLVNFPVKNLELKDYIPLP-----TPKENEKLRSKYDLIANIVHD 471
F N+ K + FP++NL++ YI TPK Y L A H
Sbjct: 787 FYADPSNSGAYMKKQNYLRFPLENLDMNPYIARAESRAVTPK-------TYQLYAVSNHY 839
Query: 472 GKPEGGFYRVFVQRKSEELW 491
G EGG Y F + + W
Sbjct: 840 GTMEGGHYTAFCKSANYGKW 859
>gi|397494913|ref|XP_003818312.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 36 [Pan paniscus]
Length = 1122
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 125/313 (39%), Gaps = 53/313 (16%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 240
Query: 304 IYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPP 362
+++ F G L VK ++S D +D P+L + L++
Sbjct: 241 VHQIFGGYLRSRVKCSVCKSVS-------------DTYD---------PYLDVALEI--- 275
Query: 363 PLFKDVMEKNIIPQVPLF---NILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRR 419
NI+ + LF ++L + + + A R+ + R + L ++R
Sbjct: 276 -----RQAANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKR 330
Query: 420 FTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG-KPEGGF 478
F NF K V +P + L ++ Y+ +N Y L A +VH G G
Sbjct: 331 FA--NFSGGKITKDVGYP-EFLNIRPYM-----SQNNGDPVMYGLYAVLVHSGYSCHAGH 382
Query: 479 YRVFVQRKSEELW 491
Y +V + S W
Sbjct: 383 YYCYV-KASNGQW 394
>gi|114205510|gb|AAI05614.1| Usp11 protein [Rattus norvegicus]
Length = 728
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 4/118 (3%)
Query: 377 VPLFNILKKFDGET---VTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTL 433
+ LF ++ + E + + +A + + LP+ +I+H++RF+ + F EK TL
Sbjct: 551 IKLFTTVETLEKENPWYCSSCKQHQLATKKLDLWMLPEVLIIHLKRFSFSKFSREKLDTL 610
Query: 434 VNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
V FP+++L+ +++ P + L KYDLIA H G G Y F K W
Sbjct: 611 VQFPIRDLDFSEFVIKPKNESAPDLY-KYDLIAVSNHYGGMRDGHYTTFACNKDSGQW 667
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 86/206 (41%), Gaps = 28/206 (13%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPE-NYRH---CKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L V L +FL + E N+R+ K L + DL ++
Sbjct: 64 CGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNRYLEELNFRNPLGMKGELAEAYADLVKQ 123
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
W + + P+ F V + + F Q + E +S+LL+ LH DL KK +
Sbjct: 124 TWSG--YHRSIVPNVFKNKVGHFASQ-FLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYV 180
Query: 304 IYECFQG----ELEVVKEIPKNTISGND-------QNTEKGSDGGDDHDNITTETSRMPF 352
E G +LEV +E +N ND K + D N++ PF
Sbjct: 181 --ELCNGAGRPDLEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFD--PF 236
Query: 353 LMLGLDLPPPPLFKDVMEKNIIPQVP 378
L +P P + V+E +P P
Sbjct: 237 CYLS--VPLPVCSRRVLEVFFVPMDP 260
>gi|417412856|gb|JAA52787.1| Putative ubiquitin carboxyl-terminal hydrolase 11, partial
[Desmodus rotundus]
Length = 833
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 76/179 (42%), Gaps = 22/179 (12%)
Query: 334 SDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKN----------IIPQVP----- 378
S+G D N +T P++ + + + D +E ++ + P
Sbjct: 592 SNGTSDRSNFNEDTHAQPYIAIDWEPEMKKRYYDEVEAEGYVKHDCVGYVLKKAPVRLQE 651
Query: 379 ---LFNILKKFDGET---VTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPT 432
LF ++ + E + +A + + LP+ +I+H++RF+ F EK T
Sbjct: 652 CIELFTTVETLEKENPWYCPSCKQHQLATKKLDLWTLPETLIIHLKRFSYTKFSREKLDT 711
Query: 433 LVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
LV FP+++L+ +++ P + +L KYDLIA H G G Y F K W
Sbjct: 712 LVEFPIRDLDFSEFVIKPQNESAPELY-KYDLIAVSNHYGGLRDGHYTTFACNKDSGQW 769
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 11/116 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL---IPENYRHC-----KSPLVHRFGDLTRK 243
GL N+ T F+N +Q L V L +FL E C K + + DL ++
Sbjct: 177 CGLTNLGNTCFMNSALQCLSNVPQLTEYFLKNRYLEELNFCNPLGMKGEIAEAYADLVKQ 236
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK 299
W + + P+ F V + + F Q + E +S+LL+ LH DL KK
Sbjct: 237 AWSGHH--RSIVPNVFKTKVGHFASQ-FLGYQQHDSQELLSFLLDGLHEDLNRVKK 289
>gi|296489875|tpg|DAA31988.1| TPA: ubiquitin carboxyl-terminal hydrolase 21 [Bos taurus]
gi|440893879|gb|ELR46495.1| Ubiquitin carboxyl-terminal hydrolase 21 [Bos grunniens mutus]
Length = 565
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 127/340 (37%), Gaps = 72/340 (21%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 211 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 268
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 269 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 326
Query: 303 IIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNIT------TETSRMPFLMLG 356
I+ P+ + G + SD DD N+ E S++ L +G
Sbjct: 327 ILAS------SPAPHPPR--LGGALLEEPELSD--DDRANLMWKRYLEREDSKIVDLFVG 376
Query: 357 -----------------------LDLPPPPLFKDVMEKNIIPQVPLFNILKK---FDGET 390
L LP P K + FN+ K + E
Sbjct: 377 QLKSCLKCQACGYRSTTFEVFCDLSLPIP---KKGFAGGKVSLRDCFNLFTKEEELESEN 433
Query: 391 VTEVVRPHVARMRYRVTR------LPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELK 444
R R + R T+ P+ ++LH+ RF+ + ++K+ V+FP++ L L
Sbjct: 434 APVCDR---CRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKKSSVGVDFPLQRLSLG 490
Query: 445 DYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQ 484
D+ ++ Y L A H G G Y +
Sbjct: 491 DF------ASDKAGSPVYQLYALCNHSGSVHYGHYTALCR 524
>gi|116283676|gb|AAH27992.1| USP36 protein [Homo sapiens]
Length = 959
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 125/313 (39%), Gaps = 53/313 (16%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 240
Query: 304 IYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPP 362
+++ F G L VK ++S D +D P+L + L++
Sbjct: 241 VHQIFGGYLRSRVKCSVCKSVS-------------DTYD---------PYLDVALEI--- 275
Query: 363 PLFKDVMEKNIIPQVPLF---NILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRR 419
NI+ + LF ++L + + + A R+ + R + L ++R
Sbjct: 276 -----RQAANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKR 330
Query: 420 FTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG-KPEGGF 478
F NF K V +P + L ++ Y+ +N Y L A +VH G G
Sbjct: 331 FA--NFSGGKITKDVGYP-EFLNIRPYM-----SQNNGDPVMYGLYAVLVHSGYSCHAGH 382
Query: 479 YRVFVQRKSEELW 491
Y +V + S W
Sbjct: 383 YYCYV-KASNGQW 394
>gi|122692453|ref|NP_001073777.1| ubiquitin carboxyl-terminal hydrolase 11 [Bos taurus]
gi|119936039|gb|ABM06061.1| ubiquitin specific protease 11 [Bos taurus]
gi|296470784|tpg|DAA12899.1| TPA: ubiquitin specific peptidase 11 [Bos taurus]
Length = 756
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 398 HVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEK 457
+A + + LP+ +I+H++RF+ F EK TLV FP+++L+ +++ P + +
Sbjct: 602 QLATKKLDLWMLPETLIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVIKPQNDSSRE 661
Query: 458 LRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
L KYDLIA H G G Y F K W
Sbjct: 662 LY-KYDLIAVSNHYGGLRDGHYTTFACNKDSGQW 694
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 15/118 (12%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL---IPENYRHC-----KSPLVHRFGDLTRK 243
GL N+ T F+N +Q L V L +FL E C K + + DL ++
Sbjct: 102 CGLTNLGNTCFMNSALQCLSNVPQLTEYFLKNRYLEELNFCNPLGMKGEIAQAYADLVKQ 161
Query: 244 IW--HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK 299
W H R+ QV + + +F Q + E +S+LL+ LH DL KK
Sbjct: 162 AWSGHHRSIVPQV-----FKTKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRIKK 214
>gi|62243586|ref|NP_001014443.1| ubiquitin carboxyl-terminal hydrolase 21 [Homo sapiens]
gi|74027267|ref|NP_036607.3| ubiquitin carboxyl-terminal hydrolase 21 [Homo sapiens]
gi|10720334|sp|Q9UK80.1|UBP21_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 21; AltName:
Full=Deubiquitinating enzyme 21; AltName: Full=Ubiquitin
thioesterase 21; AltName:
Full=Ubiquitin-specific-processing protease 21
gi|5853113|gb|AAD54321.1|AF177758_1 ubiquitin specific protease 16 [Homo sapiens]
gi|119573029|gb|EAW52644.1| ubiquitin specific peptidase 21, isoform CRA_c [Homo sapiens]
gi|158258070|dbj|BAF85008.1| unnamed protein product [Homo sapiens]
gi|223460370|gb|AAI36292.1| Ubiquitin specific peptidase 21 [Homo sapiens]
Length = 565
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 125/340 (36%), Gaps = 72/340 (21%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 211 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 268
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 269 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 326
Query: 303 IIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNIT------TETSRMPFLMLG 356
I+ +P G E+ DD N+ E S++ L +G
Sbjct: 327 ILAN---------GPVPSPPRRGGAL-LEEPELSDDDRANLMWKRYLEREDSKIVDLFVG 376
Query: 357 -----------------------LDLPPPPLFKDVMEKNIIPQVPLFNILKK---FDGET 390
L LP P K + FN+ K + E
Sbjct: 377 QLKSCLKCQACGYRSTTFEVFCDLSLPIP---KKGFAGGKVSLRDCFNLFTKEEELESEN 433
Query: 391 VTEVVRPHVARMRYRVTR------LPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELK 444
R R + R T+ P+ ++LH+ RF+ + ++K+ V+FP++ L L
Sbjct: 434 APVCDR---CRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKKSSVGVDFPLQRLSLG 490
Query: 445 DYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQ 484
D+ ++ Y L A H G G Y +
Sbjct: 491 DF------ASDKAGSPVYQLYALCNHSGSVHYGHYTALCR 524
>gi|355558658|gb|EHH15438.1| hypothetical protein EGK_01528 [Macaca mulatta]
gi|355745834|gb|EHH50459.1| hypothetical protein EGM_01292 [Macaca fascicularis]
gi|380811730|gb|AFE77740.1| ubiquitin carboxyl-terminal hydrolase 21 [Macaca mulatta]
gi|383417519|gb|AFH31973.1| ubiquitin carboxyl-terminal hydrolase 21 [Macaca mulatta]
gi|384946444|gb|AFI36827.1| ubiquitin carboxyl-terminal hydrolase 21 [Macaca mulatta]
gi|410219870|gb|JAA07154.1| ubiquitin specific peptidase 21 [Pan troglodytes]
gi|410219872|gb|JAA07155.1| ubiquitin specific peptidase 21 [Pan troglodytes]
gi|410302294|gb|JAA29747.1| ubiquitin specific peptidase 21 [Pan troglodytes]
gi|410351841|gb|JAA42524.1| ubiquitin specific peptidase 21 [Pan troglodytes]
Length = 565
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 125/340 (36%), Gaps = 72/340 (21%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 211 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 268
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 269 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 326
Query: 303 IIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNIT------TETSRMPFLMLG 356
I+ +P G E+ DD N+ E S++ L +G
Sbjct: 327 ILAN---------GPVPSPPRRGGAL-LEEPELSDDDRANLMWKRYLEREDSKIVDLFVG 376
Query: 357 -----------------------LDLPPPPLFKDVMEKNIIPQVPLFNILKK---FDGET 390
L LP P K + FN+ K + E
Sbjct: 377 QLKSCLKCQACGYRSTTFEVFCDLSLPIP---KKGFAGGKVSLRDCFNLFTKEEELESEN 433
Query: 391 VTEVVRPHVARMRYRVTR------LPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELK 444
R R + R T+ P+ ++LH+ RF+ + ++K+ V+FP++ L L
Sbjct: 434 APVCDR---CRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKKSSVGVDFPLQRLSLG 490
Query: 445 DYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQ 484
D+ ++ Y L A H G G Y +
Sbjct: 491 DF------ASDKAGSPVYQLYALCNHSGSVHYGHYTALCR 524
>gi|390594557|gb|EIN03967.1| cysteine proteinase [Punctularia strigosozonata HHB-11173 SS5]
Length = 560
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 129/321 (40%), Gaps = 51/321 (15%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE-NYRHC--KSPLVHRFGDLTRKIWHARN 249
GL N+ +T F+NV +QSL+ LRN+FL + N R C K L R+++
Sbjct: 183 GLLNLGQTCFLNVVLQSLIHNPLLRNYFLGDKHNVRLCKLKECTCCEMDALFREVYSGE- 241
Query: 250 FKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNT--SIIYEC 307
+ P FL + KAS + Q F+S +LN +H R + + II+
Sbjct: 242 -QAPYGPTSFLATLWKASSELSGYAQQDAHECFIS-ILNQIHGTSRGSTNVSCNCIIHST 299
Query: 308 FQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKD 367
FQG+L+ +D E+ N+TT T P L + L+L K
Sbjct: 300 FQGQLQ------------SDVRCERCG-------NVTTTTD--PMLDVNLELRGKG-GKV 337
Query: 368 VMEKNIIPQVPLFNILKKFDGE--TVTEVVR-PHVARMRYRVTRLPKYMILHMRRF---T 421
E ++ + F +K + + + + H A R + +LP + +RF +
Sbjct: 338 SGENTLLGCLTRFTHPEKLGPKEYSCSRCAKGSHEATKRMSIRKLPPALSFQFKRFEHKS 397
Query: 422 KNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRS--------------KYDLIAN 467
+ +K V P L ++ Y NEK +YDL A
Sbjct: 398 SDKATAQKIDAPVRIP-SMLNMQPYTTFIMNGGNEKGSGSAGGFGHPGPGELYEYDLFAV 456
Query: 468 IVHDGKPEGGFYRVFVQRKSE 488
I H+G+ + G Y F + + E
Sbjct: 457 ICHEGQIDNGHYYNFARFQDE 477
>gi|426346503|ref|XP_004040916.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Gorilla
gorilla gorilla]
Length = 1123
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 125/313 (39%), Gaps = 53/313 (16%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 240
Query: 304 IYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPP 362
+++ F G L VK ++S D +D P+L + L++
Sbjct: 241 VHQIFGGYLRSRVKCSVCKSVS-------------DTYD---------PYLDVALEI--- 275
Query: 363 PLFKDVMEKNIIPQVPLF---NILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRR 419
NI+ + LF ++L + + + A R+ + R + L ++R
Sbjct: 276 -----RQAANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKR 330
Query: 420 FTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG-KPEGGF 478
F NF K V +P + L ++ Y+ +N Y L A +VH G G
Sbjct: 331 FA--NFSGGKITKDVGYP-EFLNIRPYM-----SQNNGDPVMYGLYAVLVHSGYSCHAGH 382
Query: 479 YRVFVQRKSEELW 491
Y +V + S W
Sbjct: 383 YYCYV-KASNGQW 394
>gi|410222778|gb|JAA08608.1| ubiquitin specific peptidase 36 [Pan troglodytes]
gi|410266542|gb|JAA21237.1| ubiquitin specific peptidase 36 [Pan troglodytes]
gi|410297248|gb|JAA27224.1| ubiquitin specific peptidase 36 [Pan troglodytes]
gi|410340693|gb|JAA39293.1| ubiquitin specific peptidase 36 [Pan troglodytes]
Length = 1123
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 125/313 (39%), Gaps = 53/313 (16%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 240
Query: 304 IYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPP 362
+++ F G L VK ++S D +D P+L + L++
Sbjct: 241 VHQIFGGYLRSRVKCSVCKSVS-------------DTYD---------PYLDVALEI--- 275
Query: 363 PLFKDVMEKNIIPQVPLF---NILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRR 419
NI+ + LF ++L + + + A R+ + R + L ++R
Sbjct: 276 -----RQAANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKR 330
Query: 420 FTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG-KPEGGF 478
F NF K V +P + L ++ Y+ +N Y L A +VH G G
Sbjct: 331 FA--NFSGGKITKDVGYP-EFLNIRPYM-----SQNNGDPVMYGLYAVLVHSGYSCHAGH 382
Query: 479 YRVFVQRKSEELW 491
Y +V + S W
Sbjct: 383 YYCYV-KASNGQW 394
>gi|384941532|gb|AFI34371.1| ubiquitin carboxyl-terminal hydrolase 36 [Macaca mulatta]
Length = 1123
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 123/306 (40%), Gaps = 52/306 (16%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 240
Query: 304 IYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPP 362
+++ F G L VK ++S D +D P+L + L++
Sbjct: 241 VHQIFGGYLRSRVKCSMCKSVS-------------DTYD---------PYLDVALEI--- 275
Query: 363 PLFKDVMEKNIIPQVPLF---NILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRR 419
NI+ + LF ++L + + + A R+ + R + L ++R
Sbjct: 276 -----RQAANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKR 330
Query: 420 FTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG-KPEGGF 478
F NF K V +P + L ++ Y+ +N Y L A +VH G G
Sbjct: 331 FA--NFSGGKITKDVGYP-EFLNIRPYM-----SQNNGDPVMYGLYAVLVHSGYSCHAGH 382
Query: 479 YRVFVQ 484
Y +V+
Sbjct: 383 YYCYVK 388
>gi|60552608|gb|AAH90946.1| Ubiquitin specific peptidase 21 [Homo sapiens]
Length = 565
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 125/340 (36%), Gaps = 72/340 (21%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 211 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 268
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 269 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 326
Query: 303 IIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNIT------TETSRMPFLMLG 356
I+ +P G E+ DD N+ E S++ L +G
Sbjct: 327 ILAN---------GPVPSPPRRGGAL-LEEPELSDDDRANLMWKRYLEREDSKIVDLFVG 376
Query: 357 -----------------------LDLPPPPLFKDVMEKNIIPQVPLFNILKK---FDGET 390
L LP P K + FN+ K + E
Sbjct: 377 QLKSCLKCQACGYRSTTFEVFCDLSLPIP---KKGFAGGKVSLRDCFNLFTKEEELESEN 433
Query: 391 VTEVVRPHVARMRYRVTR------LPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELK 444
R R + R T+ P+ ++LH+ RF+ + ++K+ V+FP++ L L
Sbjct: 434 APVCDR---CRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKKSSVGVDFPLQRLSLG 490
Query: 445 DYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQ 484
D+ ++ Y L A H G G Y +
Sbjct: 491 DF------ASDKAGSPVYQLYALCNHSGSVHYGHYTALCR 524
>gi|380790487|gb|AFE67119.1| ubiquitin carboxyl-terminal hydrolase 36 [Macaca mulatta]
gi|383411117|gb|AFH28772.1| ubiquitin carboxyl-terminal hydrolase 36 [Macaca mulatta]
Length = 1123
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 123/306 (40%), Gaps = 52/306 (16%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 240
Query: 304 IYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPP 362
+++ F G L VK ++S D +D P+L + L++
Sbjct: 241 VHQIFGGYLRSRVKCSMCKSVS-------------DTYD---------PYLDVALEI--- 275
Query: 363 PLFKDVMEKNIIPQVPLF---NILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRR 419
NI+ + LF ++L + + + A R+ + R + L ++R
Sbjct: 276 -----RQAANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKR 330
Query: 420 FTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG-KPEGGF 478
F NF K V +P + L ++ Y+ +N Y L A +VH G G
Sbjct: 331 FA--NFSGGKITKDVGYP-EFLNIRPYM-----SQNNGDPVMYGLYAVLVHSGYSCHAGH 382
Query: 479 YRVFVQ 484
Y +V+
Sbjct: 383 YYCYVK 388
>gi|119936054|gb|ABM06064.1| ubiquitin specific protease 11 [Bos taurus]
Length = 802
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 398 HVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEK 457
+A + + LP+ +I+H++RF+ F EK TLV FP+++L+ +++ P + +
Sbjct: 648 QLATKKLDLWMLPETLIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVIKPQNDSSRE 707
Query: 458 LRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
L KYDLIA H G G Y F K W
Sbjct: 708 LY-KYDLIAVSNHYGGLRDGHYTTFACNKDSGQW 740
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 15/118 (12%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL---IPENYRHC-----KSPLVHRFGDLTRK 243
GL N+ T F+N +Q L V L +FL E C K + + DL ++
Sbjct: 143 CGLTNLGNTCFMNSALQCLSNVPQLTEYFLKNRYLEELNFCNPLGMKGEIAQAYADLVKQ 202
Query: 244 IW--HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK 299
W H R+ QV + + +F Q + E +S+LL+ LH DL KK
Sbjct: 203 AWSGHHRSIVPQV-----FKTKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRIKK 255
>gi|224073512|ref|XP_002198543.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Taeniopygia
guttata]
Length = 911
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 94/248 (37%), Gaps = 54/248 (21%)
Query: 100 EVRRDCPYLDT---VNRQVLDFDFEKFC-SVSLSNLNVYACLVCGKYYQGRGQK--SHAY 153
+ R CP+LD+ V R L + C S + N++ACL G Y G G+ H+
Sbjct: 3 DTRDICPHLDSIGEVTRDDLLLKSKGTCQSCGAAGPNLWACLQIGCPYVGCGESFADHST 62
Query: 154 THSLEAGHHVYINLRTEKVYCL-------------------------PDG---------- 178
H+ H++ +NL T +V+C PD
Sbjct: 63 LHAQAKKHNLTVNLTTFRVWCYACEKEVFLEQRLAAQPPSPPSKFPEPDSPLPAHPLKAV 122
Query: 179 ---------YEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-IPENYRH 228
E D L+ G+ N+ + ++N +Q+L PL FFL R
Sbjct: 123 PIAVADEGESESEDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRT 182
Query: 229 CKSP-LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLL 287
K P L + L ++WH + V P + K FR Q + EF+ L+
Sbjct: 183 DKKPALCKSYQKLVSEVWHKKR-PSYVVPSSLSHGI-KLVNPMFRGYAQQDTQEFLRCLM 240
Query: 288 NTLHSDLR 295
+ LH +L+
Sbjct: 241 DQLHEELK 248
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V RLP+ + +H++RF + K + V+FP++ L+L+ ++ KE + YDL
Sbjct: 571 KVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFL----AKECVSQITTYDL 626
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + Q W
Sbjct: 627 LSVICHHGTAGSGHYIAYCQNVINGQW 653
>gi|76443681|ref|NP_001008861.2| ubiquitin carboxyl-terminal hydrolase 11 [Rattus norvegicus]
gi|60422774|gb|AAH90333.1| Ubiquitin specific peptidase 11 [Rattus norvegicus]
gi|149044387|gb|EDL97708.1| ubiquitin specific protease 11 [Rattus norvegicus]
Length = 921
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 4/118 (3%)
Query: 377 VPLFNILKKFDGET---VTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTL 433
+ LF ++ + E + + +A + + LP+ +I+H++RF+ + F EK TL
Sbjct: 744 IKLFTTVETLEKENPWYCSSCKQHQLATKKLDLWMLPEVLIIHLKRFSFSKFSREKLDTL 803
Query: 434 VNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
V FP+++L+ +++ P + L KYDLIA H G G Y F K W
Sbjct: 804 VQFPIRDLDFSEFVIKPKNESAPDLY-KYDLIAVSNHYGGMRDGHYTTFACNKDSGQW 860
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 67/148 (45%), Gaps = 17/148 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPE-NYRH---CKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L V L +FL + E N+R+ K L + DL ++
Sbjct: 257 CGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNRYLEELNFRNPLGMKGELAEAYADLVKQ 316
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
W + + P+ F V + + F Q + E +S+LL+ LH DL KK +
Sbjct: 317 TWSG--YHRSIVPNVFKNKVGHFASQ-FLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYV 373
Query: 304 IYECFQG----ELEVVKEIPKNTISGND 327
E G +LEV +E +N ND
Sbjct: 374 --ELCNGAGRPDLEVAQEAWQNHKRRND 399
>gi|196005611|ref|XP_002112672.1| hypothetical protein TRIADDRAFT_56945 [Trichoplax adhaerens]
gi|190584713|gb|EDV24782.1| hypothetical protein TRIADDRAFT_56945 [Trichoplax adhaerens]
Length = 930
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 11/126 (8%)
Query: 181 INDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE-----NYRH---CKSP 232
+ND + GLNN+ T F+N +Q + PLR+FFL + NY + K
Sbjct: 360 VNDLKIVRDGMTGLNNLGNTCFMNSILQCMSNTRPLRDFFLECDLRNEINYDNPLGSKGA 419
Query: 233 LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHS 292
+V F L R +W + SP + L++++ A +F Q + EFM++LL+ LH
Sbjct: 420 IVAAFAVLIRTLWCGK--YHSYSPSK-LKSLVAAKATQFMGYAQQDAQEFMAYLLDGLHE 476
Query: 293 DLRNTK 298
DL +
Sbjct: 477 DLNRVR 482
>gi|410052277|ref|XP_001146571.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Pan
troglodytes]
Length = 1037
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 125/313 (39%), Gaps = 53/313 (16%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 240
Query: 304 IYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPP 362
+++ F G L VK ++S D +D P+L + L++
Sbjct: 241 VHQIFGGYLRSRVKCSVCKSVS-------------DTYD---------PYLDVALEI--- 275
Query: 363 PLFKDVMEKNIIPQVPLF---NILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRR 419
NI+ + LF ++L + + + A R+ + R + L ++R
Sbjct: 276 -----RQAANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKR 330
Query: 420 FTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG-KPEGGF 478
F NF K V +P + L ++ Y+ +N Y L A +VH G G
Sbjct: 331 FA--NFSGGKITKDVGYP-EFLNIRPYM-----SQNNGDPVMYGLYAVLVHSGYSCHAGH 382
Query: 479 YRVFVQRKSEELW 491
Y +V + S W
Sbjct: 383 YYCYV-KASNGQW 394
>gi|426257121|ref|XP_004022183.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11 isoform 1 [Ovis
aries]
Length = 756
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 398 HVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEK 457
+A + + LP+ +I+H++RF+ F EK TLV FP+++L+ +++ P +N+
Sbjct: 602 QLATKKLDLWMLPETLIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVIKP---QNDS 658
Query: 458 LRS--KYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
R KYDLIA H G G Y F K W
Sbjct: 659 ARELYKYDLIAVSNHYGGLRDGHYTTFACNKDSGQW 694
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 15/118 (12%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL---IPENYRHC-----KSPLVHRFGDLTRK 243
GL N+ T F+N +Q L V L +FL E C K + + DL ++
Sbjct: 102 CGLTNLGNTCFMNSALQCLSNVPQLTEYFLKNRYLEELNFCNPLGMKGEIAQAYADLVKQ 161
Query: 244 IW--HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK 299
W H R+ QV + + +F Q + E +S+LL+ LH DL KK
Sbjct: 162 AWSGHHRSIVPQV-----FKTKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKK 214
>gi|328793899|ref|XP_394836.4| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Apis
mellifera]
Length = 1001
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 126/315 (40%), Gaps = 30/315 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL--------IPENYRHCKSPLVHRFGDLTRK 243
GL N+ + ++N IQ L T L +F+ N + + +V + +
Sbjct: 666 TGLKNLGNSCYMNSIIQCLSNTTHLAKYFMDNLYADDLNINNDNNTQGQVVEEVAQVIKA 725
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK---N 300
+W + +K +SPH+ AV + K +F Q + EF+++LL+ +H+DL+ K
Sbjct: 726 LWRGQ-YKS-ISPHDLKIAVGQY-KLQFESYEQQDSHEFLTFLLDWMHNDLKKNCKVPVE 782
Query: 301 TSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLP 360
+I + + + + I + G ++T S T S L + L
Sbjct: 783 MTIAEKAWDKAMGSQRSIISDLFFGQLRSTITCSFCKQSSTTYETFNS----LTMSLLHS 838
Query: 361 PPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRF 420
D + K + Q K G + A ++ +L +++H+ RF
Sbjct: 839 NRCTLNDCILKFVSGQ--------KVIGWKCPKCQTAREATKKFDFVKLAPIIVIHLNRF 890
Query: 421 TKNNFFVEKNPTLVNFPVKNLELKDYIPL----PTPKENEKLRSKYDLIANIVHDGKPEG 476
++ ++EK T V+FP+ + LK Y+ T Y L A H G EG
Sbjct: 891 AESGGWLEKRNTAVDFPLTDFNLKPYLVTDNNSTTISNIRSYSYSYSLYAMSNHYGTMEG 950
Query: 477 GFYRVFVQRKSEELW 491
G Y F + ++ W
Sbjct: 951 GHYTAFCKNAAQNKW 965
>gi|308455726|ref|XP_003090371.1| hypothetical protein CRE_06198 [Caenorhabditis remanei]
gi|308264366|gb|EFP08319.1| hypothetical protein CRE_06198 [Caenorhabditis remanei]
Length = 365
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 126/339 (37%), Gaps = 65/339 (19%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFF----LIPENYRHC----KSPLVHRFGDLTRK 243
VGL N+ T F++ T+Q L + L + F I + H K + F L+
Sbjct: 24 VGLYNMGNTCFMSATLQCLFQTPGLSDVFTKKTFITKVNTHSRLGSKGIISAGFASLSDT 83
Query: 244 IWHARNFKGQVSPHEFL--------QAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR 295
IW+ + P FL Q + K G Q + EF +LL+ LH D
Sbjct: 84 IWNGT--YTAIRPSRFLPPIPLFFQQLFAEEVYKALNDGRQHDASEFQIFLLDALHED-- 139
Query: 296 NTKKNTSIIYEC-FQGELEVVKEIP-----KNTISGNDQNTEKGSDGGDDHDNITTETSR 349
T + I +E ++G + +E + + N GS + +T S
Sbjct: 140 -TNQAARIGFEQNYRGGQAIREEAADFLKKHYMFTASPVNRILGSISVSEVRCLTCHESS 198
Query: 350 MPFLMLGLDLPPPPLFKDVMEKNIIPQVPLF--------NILK------KFDGETVTEVV 395
F E+N I V + N L+ K +G++
Sbjct: 199 ATF-----------------EENTIVSVEIVSTSSCSLDNCLQSHFSTTKLEGDSCWNCP 241
Query: 396 RPHVARMRYRVTRL---PKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTP 452
+ R R ++L P +I+H++RF+ N EKN V+F +N + Y+
Sbjct: 242 KCKQPRPSTRTSKLWQPPTVLIIHLKRFSMFNGDFEKNTAQVSFNPENFNISPYLHEAAS 301
Query: 453 KENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
+E R+ Y L A +H+G+ G Y E W
Sbjct: 302 RE----RTNYKLYAATLHNGRLNSGHYTAVASHLKSERW 336
>gi|148745324|gb|AAI42474.1| USP11 protein [Bos taurus]
Length = 910
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 398 HVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEK 457
+A + + LP+ +I+H++RF+ F EK TLV FP+++L+ +++ P + +
Sbjct: 756 QLATKKLDLWMLPETLIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVIKPQNDSSRE 815
Query: 458 LRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
L KYDLIA H G G Y F K W
Sbjct: 816 L-YKYDLIAVSNHYGGLRDGHYTTFACNKDSGQW 848
Score = 42.0 bits (97), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 17/148 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL---IPENYRHC-----KSPLVHRFGDLTRK 243
GL N+ T F+N +Q L V L +FL E C K + + DL ++
Sbjct: 256 CGLTNLGNTCFMNSALQCLSNVPQLTEYFLKNRYLEELNFCNPLGMKGEIAQAYADLVKQ 315
Query: 244 IW--HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNT 301
W H R+ QV + + +F Q + E +S+LL+ LH DL KK
Sbjct: 316 AWSGHHRSIVPQV-----FKTKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRIKKKE 370
Query: 302 SIIYECFQG--ELEVVKEIPKNTISGND 327
+ G + EV +E +N ND
Sbjct: 371 YVELCDAAGRPDQEVAQEAWQNHKRRND 398
>gi|114052120|ref|NP_001039841.1| ubiquitin carboxyl-terminal hydrolase 21 [Bos taurus]
gi|122136171|sp|Q2KJ72.1|UBP21_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 21; AltName:
Full=Deubiquitinating enzyme 21; AltName: Full=Ubiquitin
thioesterase 21; AltName:
Full=Ubiquitin-specific-processing protease 21
gi|86821766|gb|AAI05489.1| Ubiquitin specific peptidase 21 [Bos taurus]
Length = 565
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 127/340 (37%), Gaps = 72/340 (21%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 211 HVGLRNLGNTCFLNALLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 268
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 269 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 326
Query: 303 IIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNIT------TETSRMPFLMLG 356
I+ P+ + G + SD DD N+ E S++ L +G
Sbjct: 327 ILAS------SPAPHPPR--LGGALLEEPELSD--DDRANLMWKRYLEREDSKIVDLFVG 376
Query: 357 -----------------------LDLPPPPLFKDVMEKNIIPQVPLFNILKK---FDGET 390
L LP P K + FN+ K + E
Sbjct: 377 QLKSCLKCQACGYRSTTFEVFCDLSLPIP---KKGFAGGKVSLRDCFNLFTKEEELESEN 433
Query: 391 VTEVVRPHVARMRYRVTR------LPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELK 444
R R + R T+ P+ ++LH+ RF+ + ++K+ V+FP++ L L
Sbjct: 434 APVCDR---CRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKKSSVGVDFPLQRLSLG 490
Query: 445 DYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQ 484
D+ ++ Y L A H G G Y +
Sbjct: 491 DF------ASDKAGSPVYQLYALCNHSGSVHYGHYTALCR 524
>gi|426257123|ref|XP_004022184.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11 isoform 2 [Ovis
aries]
Length = 802
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 398 HVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEK 457
+A + + LP+ +I+H++RF+ F EK TLV FP+++L+ +++ P +N+
Sbjct: 648 QLATKKLDLWMLPETLIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVIKP---QNDS 704
Query: 458 LRS--KYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
R KYDLIA H G G Y F K W
Sbjct: 705 ARELYKYDLIAVSNHYGGLRDGHYTTFACNKDSGQW 740
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 15/118 (12%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL---IPENYRHC-----KSPLVHRFGDLTRK 243
GL N+ T F+N +Q L V L +FL E C K + + DL ++
Sbjct: 143 CGLTNLGNTCFMNSALQCLSNVPQLTEYFLKNRYLEELNFCNPLGMKGEIAQAYADLVKQ 202
Query: 244 IW--HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK 299
W H R+ QV + + +F Q + E +S+LL+ LH DL KK
Sbjct: 203 AWSGHHRSIVPQV-----FKTKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKK 255
>gi|308081762|ref|NP_001183969.1| ubiquitin carboxyl-terminal hydrolase 11 [Canis lupus familiaris]
Length = 770
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 398 HVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEK 457
+A + + LP+ +I+H++RF+ F EK TLV FP+++L+ +++ P + +
Sbjct: 616 QLATKKLDLWMLPETLIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVIKPQNESAPE 675
Query: 458 LRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
L KYDLIA H G G Y F K W
Sbjct: 676 LY-KYDLIAVSNHYGGLRDGHYTTFACNKDSGQW 708
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 50/116 (43%), Gaps = 11/116 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL---IPENYRHC-----KSPLVHRFGDLTRK 243
GL N+ T F+N +Q L V L +FL E C K + + DL ++
Sbjct: 102 CGLTNLGNTCFMNSALQCLSNVPQLTEYFLKNHYLEELNFCNPLGMKGEIAEAYADLVKQ 161
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK 299
W + + PH F V + + F Q + E +S+LL+ LH DL KK
Sbjct: 162 AWSGHH--RSIVPHVFKTKVGHFASQ-FLGYQQHDSQELLSFLLDGLHEDLNRVKK 214
>gi|363740497|ref|XP_415470.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Gallus gallus]
Length = 892
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 92/242 (38%), Gaps = 48/242 (19%)
Query: 100 EVRRDCPYLDT---VNRQVLDFDFEKFC-SVSLSNLNVYACLVCGKYYQGRGQK--SHAY 153
+ R CP+LD+ V R L + C S N++ACL G Y G G+ H+
Sbjct: 3 DTRDICPHLDSIGEVTRDDLLLKSKGTCQSCGAVGPNLWACLQIGCPYVGCGESFADHST 62
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEI-------------------------------- 181
H+ H++ +NL T +V+C E+
Sbjct: 63 LHAQAKEHNLTVNLTTFRVWCYACEKEVFLDQRLAVHTQSPSDSPLPAHPLKAVPIAVAD 122
Query: 182 ------NDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-IPENYRHCKSP-L 233
D L+ G+ N+ + ++N +Q+L PL FFL R K P L
Sbjct: 123 EGESESEDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKPAL 182
Query: 234 VHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSD 293
+ L ++WH + V P + K FR Q + EF+ L++ LH +
Sbjct: 183 CKSYQKLVSEVWHKKR-PSYVVPSSLSHGI-KLVNPMFRGYAQQDTQEFLRCLMDQLHEE 240
Query: 294 LR 295
L+
Sbjct: 241 LK 242
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V RLP+ + +H++RF + K + V+FP++ L+L+ ++ KE + YDL
Sbjct: 552 KVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFL----AKECVSQITTYDL 607
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + Q W
Sbjct: 608 LSVICHHGTAGSGHYIAYCQNVINGQW 634
>gi|395854375|ref|XP_003799671.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11 [Otolemur
garnettii]
Length = 915
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 398 HVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEK 457
+A + + LP+ +I+H++RF+ F EK TLV FP+++L+ +++ P + +
Sbjct: 761 QLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTLVQFPIRDLDFSEFVLKPQNESAPE 820
Query: 458 LRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
L KYDLIA H G G Y F K W
Sbjct: 821 LY-KYDLIAVSNHYGGMRDGHYTTFACNKDSGQW 853
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 86/206 (41%), Gaps = 28/206 (13%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPE-NYRH---CKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L V L +FL + E N+R+ K + + DL ++
Sbjct: 261 CGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNRYLEELNFRNPLGMKGEIAEAYADLVKQ 320
Query: 244 IW--HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNT 301
W H R+ + PH F V + + F Q + E +S+LL+ LH DL KK
Sbjct: 321 AWSGHHRS----IVPHVFKTKVGHFASQ-FLGYQQHDSQELLSFLLDGLHEDLNRVKKKE 375
Query: 302 SIIYECFQG--ELEVVKEIPKNTISGND-------QNTEKGSDGGDDHDNITTETSRMPF 352
+ G + EV +E +N ND K + D N++ PF
Sbjct: 376 YVELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFD--PF 433
Query: 353 LMLGLDLPPPPLFKDVMEKNIIPQVP 378
L +P P K V+E IP P
Sbjct: 434 CYLS--VPLPVSHKRVLEVFFIPMDP 457
>gi|395852854|ref|XP_003798945.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Otolemur
garnettii]
Length = 1330
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 121/312 (38%), Gaps = 51/312 (16%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
GL N+ T F N +Q L PL N+ L E+ + C + + I A +
Sbjct: 111 AGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCIMQAHITQALSNP 170
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK-------KNTSII 304
G V F+ M+ + FR G Q + EF+ + ++ + N + T+ +
Sbjct: 171 GDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTFV 230
Query: 305 YECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPP 363
+ F G L VK + N + SD D P+L + L++
Sbjct: 231 CQIFGGYLRSRVKCL----------NCKGVSDTFD------------PYLDITLEIKAAQ 268
Query: 364 LFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPH---VARMRYRVTRLPKYMILHMRRF 420
+E+ + P+ + DGE + + A R+ + R + L ++RF
Sbjct: 269 TVNKALEQFVKPE--------QLDGENAYKCSKCKKMVTASKRFTIHRSSNVLTLSLKRF 320
Query: 421 TKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG-KPEGGFY 479
NF K V +P + L+++ Y+ P E + Y L A +VH G G Y
Sbjct: 321 A--NFTGGKIAKDVKYP-EYLDIRPYMSQPN---GEPI--IYVLYAVLVHTGFNCHAGHY 372
Query: 480 RVFVQRKSEELW 491
++ + S LW
Sbjct: 373 FCYI-KASNGLW 383
>gi|429240193|ref|NP_595732.2| ubiquitin C-terminal hydrolase Ubp4 [Schizosaccharomyces pombe
972h-]
gi|384872646|sp|O60139.2|UBP4_SCHPO RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase 4;
AltName: Full=Deubiquitinating enzyme 4; AltName:
Full=Ubiquitin thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4
gi|347834304|emb|CAA18405.2| ubiquitin C-terminal hydrolase Ubp4 [Schizosaccharomyces pombe]
Length = 593
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 152/361 (42%), Gaps = 46/361 (12%)
Query: 153 YTHSLEAGHHVYINLRTEKVYCLPDGYEINDP-------SLEDIRHVGLNNIKETDFVNV 205
Y + + +Y LR+ K+ P E+ +P S E+ + +GL N+ T ++N
Sbjct: 183 YFEDVSLAYKLYSMLRSLKLD--PHFMELANPKKVDSSLSYENYQPIGLTNLGNTCYMNC 240
Query: 206 TIQSLMRVTPLRNFFL----IPENYRHCKSPL------VHRFGDLTRKIWHARNFKGQVS 255
+Q L L L + +N + K+PL F L + + + +S
Sbjct: 241 VLQCLFACKDLTIPMLQGRGLLQNI-NTKNPLGTGGKITSAFFSLLQSVLLNHG-QRSIS 298
Query: 256 PHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVV 315
P FL+ ++++ + F I Q + EF+++ L+ LH DL N+ + S I + +L
Sbjct: 299 PRNFLE-IVQSLNRDFSIDGQCDAQEFLNFFLDKLHEDL-NSNASRSPIAPLTEDQLSAR 356
Query: 316 KEIPKNTISGNDQNTEKGSDGGDDHDNIT--------------TETSRMPFLMLGL---D 358
+E+P + S + N S+ +N T T+ PF L + D
Sbjct: 357 EELPLSHFSHIEWNLHLRSNKSIVVNNFVGQLCSRTQCMTCGRTSTTFAPFTSLAIPIDD 416
Query: 359 LPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMR 418
+ ++ + K P+ +L+ DG A+ +++LP+Y+I+ ++
Sbjct: 417 VSHVVSLQECLLKFSAPE-----LLQGHDGWHCPVCKVQRSAKKVIMISKLPEYLIIQIQ 471
Query: 419 RFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEGGF 478
RF + +K T + ++ + K +P + S Y+L A I H G+ E G
Sbjct: 472 RFKISVMGRKKIDTPLGLSLQ-IPSKMLVPPSFQSGIGYIPSNYNLFAFICHYGQLENGH 530
Query: 479 Y 479
Y
Sbjct: 531 Y 531
>gi|241714784|ref|XP_002413525.1| ubiquitin carboxy-terminal hydrolase, putative [Ixodes scapularis]
gi|215507339|gb|EEC16833.1| ubiquitin carboxy-terminal hydrolase, putative [Ixodes scapularis]
Length = 913
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 379 LFNILKKFDGE--TVTEVVRPH-VARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVN 435
LF +K E R H A ++ + LP+ +I+H++RF+ N F+ +K TLV
Sbjct: 774 LFTTTEKLGAEDPWFCPSCRSHKQATKKFDLWSLPRVLIIHLKRFSYNRFWRDKIDTLVE 833
Query: 436 FPVKNLELKDYIPLPTPKENEKLR-SKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
FP+ NL + DYI N+K + YDLIA H G GG Y + + K E W
Sbjct: 834 FPISNLRMHDYII------NQKHGPAVYDLIAVANHYGGMGGGHYTAYAKNKETEQW 884
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 10/111 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHC--------KSPLVHRFGDLTRK 243
GL N+ T F+N +Q + PL +F+ + + K + + DL R
Sbjct: 271 CGLANLGNTCFMNAAVQCMSNTPPLTEYFMEGRHLQELNHSNPLGMKGEVAKSYADLIRV 330
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+W N + P F + ++ +F Q + E M++LL+ LH DL
Sbjct: 331 MWSG-NCSSTI-PRPFKASGLRGFAPQFSGFQQQDCQELMAFLLDGLHEDL 379
>gi|301764841|ref|XP_002917823.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 11-like [Ailuropoda melanoleuca]
Length = 952
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 398 HVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEK 457
+A + + LP+ +I+H++RF+ F EK TLV FP+++L+ +++ P + +
Sbjct: 798 QLATKKLDLWTLPETLIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVIKPQNESAPE 857
Query: 458 LRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
L KYDLIA H G G Y F K W
Sbjct: 858 LY-KYDLIAVSNHYGGLRDGHYTTFACNKDSGQW 890
>gi|395737001|ref|XP_003776847.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 8-like [Pongo abelii]
Length = 997
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 133/341 (39%), Gaps = 79/341 (23%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFF--------LIPENYRHCKSPLVHRFGDLTRK 243
GL+N++ T ++N +Q L L ++F + N K + FG + +
Sbjct: 646 TGLHNLRNTCYMNSILQCLCNAPHLADYFNXNCYQDDINKSNLLGHKGEVAKVFGIIMKA 705
Query: 244 IWHARNFKGQ---VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-----R 295
+W GQ +SP + L+ + F Q + EF+ +L++ LH DL R
Sbjct: 706 LW-----TGQYRCISPKD-LKITIGKINYHFAGYSQQDSQEFLLFLMDGLHEDLNKTDNR 759
Query: 296 NTKK-----------------------NTSIIYECFQGELEVVKEIPKNTISGNDQNTEK 332
T K N SII FQG+ K+T+ ++ +
Sbjct: 760 KTYKEENNDHLNYFKAAEHAXQKHKRLNESIIVVLFQGQF-------KSTVQCLTRHKKS 812
Query: 333 GSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF--DGET 390
+ F+ L L L + + LF+ +K +
Sbjct: 813 RTFEA--------------FMYLSL------LIASTSNCTLXDCLRLFSKEEKLIDNNRF 852
Query: 391 VTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLP 450
R + + +LP +++H++ F+ N + +K T V+FP++NL L Y+
Sbjct: 853 YCNHCRAQWDSXKEEIWKLPPVLLVHLKHFSYNGRWKQKLQTSVDFPLENLALSQYV--I 910
Query: 451 TPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
PK N K KY+L + H G +GG Y + + +++ W
Sbjct: 911 GPKNNLK---KYNLFSVSDHCGGLDGGHYTAYCKNAAKQRW 948
>gi|145340853|ref|XP_001415532.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575755|gb|ABO93824.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 688
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 12/139 (8%)
Query: 362 PPLFKDVMEKNIIPQVPLFNILKKF--------DGETVTEVVRPHVARMR-YRVTRLPKY 412
P + ++ +E + PL + ++ F D + + HV M+ + R+P
Sbjct: 480 PSVTENAIENSGTQGTPLASCIESFIQEEPLGKDDMWYCKQCKDHVQAMKKLDLWRMPPI 539
Query: 413 MILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG 472
+++H++RF+ + + +K TL++FP+ L++ Y+ P + YDL A + H G
Sbjct: 540 LVMHLKRFSYSRTWRDKIDTLIDFPLNTLDMTPYV---LPNASSGPAPIYDLYAVVNHFG 596
Query: 473 KPEGGFYRVFVQRKSEELW 491
GG Y + + E W
Sbjct: 597 GMGGGHYTAYTRHAEEGTW 615
>gi|350595653|ref|XP_003484153.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 11 [Sus scrofa]
Length = 951
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 398 HVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEK 457
+A + + LP+ +I+H++RF+ F EK TLV FP+++L+ +++ P + +
Sbjct: 797 QLATKKLDLWMLPETLIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVIKPQNESAPE 856
Query: 458 LRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
L KYDLIA H G G Y F K W
Sbjct: 857 LY-KYDLIAVSNHYGGLRDGHYTTFACNKDSGQW 889
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 53/122 (43%), Gaps = 15/122 (12%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL---IPENYRHC-----KSPLVHRFGDLTRK 243
GL N+ T F+N +Q L V L +FL E C K + + DL ++
Sbjct: 297 CGLTNLGNTCFMNSALQCLSNVPQLTEYFLKNRYLEELNFCNPLGMKGEIAEAYADLVKQ 356
Query: 244 IW--HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNT 301
W H R+ + PH F V + + F Q + E +S+LL+ LH DL KK
Sbjct: 357 AWSGHHRS----IVPHVFKTKVGHFASQ-FLGYQQHDSQELLSFLLDGLHEDLNRVKKKE 411
Query: 302 SI 303
+
Sbjct: 412 YV 413
>gi|18086363|gb|AAL57643.1| AT3g14400/MLN21_18 [Arabidopsis thaliana]
Length = 661
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 132/301 (43%), Gaps = 32/301 (10%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHR------FGDLTRKIW 245
+GL N+ T ++N +Q L PL NF L ++ HC + + F + ++I
Sbjct: 24 LGLRNLGNTCYLNSVLQCLTFTPPLANFCLTHKHSSHCDTYVDGERKRDCPFCIVEKRIA 83
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIY 305
+ + + + +K + F++G + + EF+ ++++ H+ KK
Sbjct: 84 RSLSVDLTTDAPNKISSCLKIFAEHFKLGREEDAHEFLRYVIDACHNTSLRLKKLRYNGN 143
Query: 306 ECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLM-LGLDLPPPPL 364
E F G VVKEI G Q+ K G E+++ +M + L++
Sbjct: 144 EPFNGN-SVVKEI----FGGALQSQVKCLSCG-------AESNKADEIMDISLEILQSSS 191
Query: 365 FKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNN 424
K+ ++K Q + + K+ E+ ++V AR + + + P +++ ++RF
Sbjct: 192 VKESLQKFF--QSEILDGNNKYRCESCEKLV---TARKQMSILQAPNILVIQLKRF--GG 244
Query: 425 FFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDG-KPEGGFYRVFV 483
F K ++F + L L +++ K ++ + +Y L IVH G PE G Y +V
Sbjct: 245 IFGGKIDKAISFG-EILVLSNFM----SKASKDPQPEYKLFGIIVHSGFSPESGHYYAYV 299
Query: 484 Q 484
+
Sbjct: 300 K 300
>gi|410988427|ref|XP_004000487.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 11 [Felis catus]
Length = 951
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 398 HVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEK 457
+A + + LP+ +I+H++RF+ F EK TLV FP+++L+ +++ P + +
Sbjct: 797 QLATKKLDLWMLPETLIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVIKPQNESAPE 856
Query: 458 LRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
L KYDLIA H G G Y F K W
Sbjct: 857 LY-KYDLIAVSNHYGGLRDGHYTTFACNKDSGQW 889
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 15/122 (12%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL---IPENYRHC-----KSPLVHRFGDLTRK 243
GL N+ T F+N +Q L V L ++FL E C K + + DL ++
Sbjct: 297 CGLTNLGNTCFMNSALQCLSNVPQLTDYFLKNRYLEELNFCNPLGMKGEIAEAYADLVKQ 356
Query: 244 IW--HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNT 301
W H R+ + PH F V + + F Q + E +S+LL+ LH DL KK
Sbjct: 357 AWSGHHRS----IVPHVFKTKVGHFASQ-FLGYQQHDSQELLSFLLDGLHEDLNRVKKKE 411
Query: 302 SI 303
+
Sbjct: 412 YV 413
>gi|326508908|dbj|BAJ86847.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 762
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 66/115 (57%), Gaps = 5/115 (4%)
Query: 180 EINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGD 239
+++DP+ E I GL N+ T F++ +Q+L+ L ++FL +N + L+ +F D
Sbjct: 130 DLSDPTAE-IGVCGLRNLGNTCFMSAGLQALLSTENLVSYFLSFDN-DGSEETLIGQFSD 187
Query: 240 LTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
L ++ WH + ++PH+F + V+ +FR Q + EF++ LL++L+ +L
Sbjct: 188 LAKRFWHGQ--YSVINPHQF-KYVLGKRYAQFRDCSQHDCQEFLALLLDSLNDEL 239
>gi|403298497|ref|XP_003940054.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Saimiri
boliviensis boliviensis]
Length = 915
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 97/254 (38%), Gaps = 54/254 (21%)
Query: 105 CPYLDT---VNRQVLDFDFEKFC-SVSLSNLNVYACLVCGKYYQGRGQKS--HAYTHSLE 158
CP+LD+ V ++ L + C S ++ N++ACL Y G G+ S H+ H+
Sbjct: 8 CPHLDSIGEVTKEDLLLKSKGTCQSCGVTGPNLWACLQVACPYVGCGESSADHSTIHAQT 67
Query: 159 AGHHVYINLRTEKVYCL---------------PDGY------------------------ 179
H++ +NL T +++C P G
Sbjct: 68 KKHNLTVNLTTFRLWCYACEKEVFLEQQLVAPPPGSFSKFSEQDSPPPSHPLKAVPIAVA 127
Query: 180 -----EINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY-RHCKSP- 232
E D L+ G+ N+ + ++N +Q+L PL FFL R K P
Sbjct: 128 DEGESESEDDDLKPRGLTGMKNVGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKPA 187
Query: 233 LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHS 292
L + L ++WH + V P + K FR Q + EF+ L++ LH
Sbjct: 188 LCKSYQKLVSEVWHKKR-PSYVVPTSLSHGI-KLVNPMFRGYAQQDTQEFLRCLMDQLHE 245
Query: 293 DLRNTKKNTSIIYE 306
+L+ T + E
Sbjct: 246 ELKEPAVATVALME 259
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 405 RVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRSKYDL 464
+V RLP+ + +H++RF + K + V+FP++ L+L+ ++ KE + YDL
Sbjct: 574 KVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFL----AKECTSQITTYDL 629
Query: 465 IANIVHDGKPEGGFYRVFVQRKSEELW 491
++ I H G G Y + Q W
Sbjct: 630 LSVICHHGTAGSGHYIAYCQNVINGQW 656
>gi|395516315|ref|XP_003762336.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 4 [Sarcophilus harrisii]
Length = 989
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 78/184 (42%), Gaps = 18/184 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL +FL E N K + + +L ++
Sbjct: 322 CGLGNLGNTCFMNSALQCLSNTAPLTEYFLKNEYEAEINRDNPLGMKGEIAEAYAELIKQ 381
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W RN QV+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 382 MWSGRN--TQVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 438
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G +L V KE +N ND G + E S++ PF L
Sbjct: 439 ELKDANGRPDLVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECSKISVTFDPFCYLT 498
Query: 357 LDLP 360
L LP
Sbjct: 499 LPLP 502
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 400 ARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLR 459
A ++ + LPK +++H++RF+ N ++ +K T+V FP+++L + +++ P
Sbjct: 833 ATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRDLHMSEFVCDPAAGP----- 887
Query: 460 SKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
YDLIA H G G Y + + K W
Sbjct: 888 YVYDLIAVSNHYGAMGVGHYTAYAKNKLNGKW 919
>gi|338729116|ref|XP_001917109.2| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 11 [Equus caballus]
Length = 960
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 398 HVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEK 457
+A + + LP+ +I+H++RF+ F EK TLV FP+++L+ +++ P + +
Sbjct: 806 QLATKKLDLWMLPETLIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVIKPQNESAPE 865
Query: 458 LRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
L KYDLIA H G G Y F K W
Sbjct: 866 LY-KYDLIAVSNHYGGLRDGHYTTFACNKDSGQW 898
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 15/118 (12%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL---IPENYRHC-----KSPLVHRFGDLTRK 243
GL N+ T F+N +Q L V L +FL E C K + + DL ++
Sbjct: 300 CGLTNLGNTCFMNSALQCLSNVPQLTEYFLKNRYLEELNFCNPLGMKGEIAEAYADLVKQ 359
Query: 244 IW--HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK 299
W H R+ + PH F V + + F Q + E +S+LL+ LH DL KK
Sbjct: 360 AWSGHHRS----IVPHVFKTKVGHFASQ-FLGYQQHDSQELLSFLLDGLHEDLNRVKK 412
>gi|444525919|gb|ELV14207.1| Ubiquitin carboxyl-terminal hydrolase 11 [Tupaia chinensis]
Length = 937
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 398 HVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEK 457
+A + + LP+ +I+H++RF+ F EK TLV FP+++L+ +++ P + +
Sbjct: 783 QLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVIKPQNESAPE 842
Query: 458 LRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELW 491
L KYDLIA H G G Y F K W
Sbjct: 843 LY-KYDLIAVSNHYGGMRDGHYTTFACNKDSGQW 875
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.137 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,466,054,674
Number of Sequences: 23463169
Number of extensions: 397390967
Number of successful extensions: 2009392
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1379
Number of HSP's successfully gapped in prelim test: 2624
Number of HSP's that attempted gapping in prelim test: 1974507
Number of HSP's gapped (non-prelim): 26895
length of query: 491
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 344
effective length of database: 8,910,109,524
effective search space: 3065077676256
effective search space used: 3065077676256
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 79 (35.0 bits)