Query 011220
Match_columns 490
No_of_seqs 250 out of 830
Neff 6.4
Searched_HMMs 46136
Date Thu Mar 28 22:55:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011220.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011220hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1021 Acetylglucosaminyltran 100.0 3E-67 6.4E-72 560.7 26.3 380 91-484 69-459 (464)
2 PF03016 Exostosin: Exostosin 100.0 4.3E-53 9.4E-58 425.1 19.5 285 91-434 1-302 (302)
3 KOG2264 Exostosin EXT1L [Signa 99.9 2.2E-24 4.8E-29 224.6 11.9 332 92-480 156-526 (907)
4 KOG1022 Acetylglucosaminyltran 99.2 2E-10 4.3E-15 120.9 12.3 264 165-480 130-408 (691)
5 cd03814 GT1_like_2 This family 95.7 0.066 1.4E-06 53.4 10.0 93 353-455 258-352 (364)
6 cd03794 GT1_wbuB_like This fam 95.2 0.16 3.4E-06 50.6 10.5 93 353-455 286-386 (394)
7 PF00852 Glyco_transf_10: Glyc 94.2 0.11 2.4E-06 54.3 6.9 112 307-435 176-296 (349)
8 cd03808 GT1_cap1E_like This fa 93.9 0.45 9.7E-06 46.8 10.4 87 353-449 255-343 (359)
9 cd03807 GT1_WbnK_like This fam 93.7 0.51 1.1E-05 46.6 10.2 91 353-455 260-353 (365)
10 PF00534 Glycos_transf_1: Glyc 93.4 0.073 1.6E-06 48.4 3.4 85 352-446 83-169 (172)
11 cd03820 GT1_amsD_like This fam 93.2 0.48 1E-05 46.3 9.1 94 353-455 244-339 (348)
12 cd03822 GT1_ecORF704_like This 92.9 0.14 3E-06 51.3 4.9 93 353-456 259-355 (366)
13 cd03809 GT1_mtfB_like This fam 92.9 0.14 2.9E-06 51.3 4.8 92 353-456 264-357 (365)
14 cd03801 GT1_YqgM_like This fam 92.8 0.18 4E-06 49.4 5.5 93 353-455 267-362 (374)
15 TIGR03449 mycothiol_MshA UDP-N 92.6 0.62 1.4E-05 48.5 9.4 95 353-457 294-390 (405)
16 PLN02871 UDP-sulfoquinovose:DA 92.5 0.21 4.6E-06 53.7 6.0 99 353-458 323-423 (465)
17 cd03800 GT1_Sucrose_synthase T 92.5 0.85 1.8E-05 46.7 10.1 93 353-455 294-389 (398)
18 cd03798 GT1_wlbH_like This fam 91.8 0.83 1.8E-05 45.0 8.9 41 353-394 270-310 (377)
19 PRK09814 beta-1,6-galactofuran 91.8 0.22 4.8E-06 51.2 4.8 88 353-453 218-316 (333)
20 cd04962 GT1_like_5 This family 89.4 0.63 1.4E-05 47.3 5.6 92 354-455 263-357 (371)
21 cd03806 GT1_ALG11_like This fa 88.9 2.6 5.7E-05 44.8 10.2 138 307-456 273-414 (419)
22 cd03819 GT1_WavL_like This fam 88.8 1.3 2.8E-05 44.5 7.4 93 353-455 255-352 (355)
23 cd04951 GT1_WbdM_like This fam 88.5 0.65 1.4E-05 46.7 4.9 40 354-394 255-294 (360)
24 cd03823 GT1_ExpE7_like This fa 88.0 1.1 2.4E-05 44.4 6.2 86 353-448 254-342 (359)
25 TIGR03088 stp2 sugar transfera 88.0 0.77 1.7E-05 47.2 5.2 92 353-456 264-360 (374)
26 cd03818 GT1_ExpC_like This fam 88.0 2.1 4.5E-05 44.8 8.5 94 352-455 291-387 (396)
27 cd03821 GT1_Bme6_like This fam 88.0 0.68 1.5E-05 45.9 4.6 91 353-455 273-366 (375)
28 TIGR02149 glgA_Coryne glycogen 86.7 1.3 2.8E-05 45.5 6.1 98 353-456 272-374 (388)
29 TIGR02095 glgA glycogen/starch 86.6 4.5 9.9E-05 43.5 10.4 95 353-456 357-460 (473)
30 PRK15427 colanic acid biosynth 86.2 2.1 4.5E-05 45.4 7.4 90 353-455 290-392 (406)
31 PRK15484 lipopolysaccharide 1, 86.1 4.5 9.8E-05 42.3 9.8 42 352-394 267-309 (380)
32 cd05844 GT1_like_7 Glycosyltra 85.8 1.8 3.9E-05 43.9 6.4 94 353-456 256-358 (367)
33 PRK00654 glgA glycogen synthas 83.9 7.2 0.00016 42.1 10.3 94 354-456 349-450 (466)
34 PRK14098 glycogen synthase; Pr 83.7 6 0.00013 43.3 9.7 41 353-393 373-413 (489)
35 cd04949 GT1_gtfA_like This fam 83.6 1.6 3.5E-05 44.7 5.0 94 353-455 270-365 (372)
36 KOG2619 Fucosyltransferase [Ca 83.3 4.7 0.0001 42.6 8.2 157 271-442 162-324 (372)
37 cd03804 GT1_wbaZ_like This fam 82.4 1.3 2.8E-05 45.1 3.7 40 353-394 253-292 (351)
38 cd03793 GT1_Glycogen_synthase_ 82.1 2.5 5.4E-05 47.2 5.9 133 335-474 445-589 (590)
39 cd03802 GT1_AviGT4_like This f 82.0 3.7 8.1E-05 40.8 6.8 41 353-394 235-276 (335)
40 PLN02949 transferase, transfer 81.0 5.3 0.00011 43.5 7.9 40 353-392 346-385 (463)
41 cd04955 GT1_like_6 This family 79.2 4.1 8.9E-05 40.9 6.0 41 353-394 259-300 (363)
42 PRK14099 glycogen synthase; Pr 77.3 14 0.00031 40.3 9.9 91 353-457 360-467 (485)
43 PF13524 Glyco_trans_1_2: Glyc 77.3 3.2 7E-05 33.9 3.8 80 365-455 2-83 (92)
44 TIGR03087 stp1 sugar transfera 77.3 4.1 8.8E-05 42.6 5.5 91 354-457 290-385 (397)
45 cd03791 GT1_Glycogen_synthase_ 75.9 18 0.0004 38.6 10.2 39 354-392 363-401 (476)
46 cd03805 GT1_ALG2_like This fam 75.2 5 0.00011 41.3 5.5 41 353-394 291-331 (392)
47 cd03795 GT1_like_4 This family 74.8 8.5 0.00018 38.4 6.9 93 353-455 255-353 (357)
48 PHA01630 putative group 1 glyc 73.7 5.9 0.00013 41.0 5.5 41 353-394 201-241 (331)
49 cd03817 GT1_UGDG_like This fam 73.3 11 0.00024 37.2 7.2 90 353-453 270-361 (374)
50 cd03792 GT1_Trehalose_phosphor 72.4 6.8 0.00015 40.4 5.6 94 352-456 264-359 (372)
51 cd03811 GT1_WabH_like This fam 71.2 9.8 0.00021 37.0 6.2 62 354-421 256-317 (353)
52 cd03799 GT1_amsK_like This is 69.4 13 0.00028 37.1 6.7 93 353-455 247-348 (355)
53 TIGR02472 sucr_P_syn_N sucrose 68.9 7.4 0.00016 41.5 5.1 93 354-456 329-428 (439)
54 cd03825 GT1_wcfI_like This fam 68.3 17 0.00038 36.3 7.5 87 353-449 256-344 (365)
55 cd03796 GT1_PIG-A_like This fa 66.9 3.3 7.2E-05 43.3 1.9 41 353-394 261-301 (398)
56 cd03813 GT1_like_3 This family 66.7 7.8 0.00017 41.9 4.8 87 353-448 362-455 (475)
57 PRK09922 UDP-D-galactose:(gluc 66.1 5.5 0.00012 41.0 3.4 40 353-393 249-288 (359)
58 cd03816 GT1_ALG1_like This fam 66.0 13 0.00029 39.3 6.3 89 352-450 305-399 (415)
59 cd04946 GT1_AmsK_like This fam 60.2 24 0.00052 37.3 7.0 85 353-449 300-391 (407)
60 PHA01633 putative glycosyl tra 57.9 12 0.00026 39.0 4.1 41 353-394 215-255 (335)
61 KOG1387 Glycosyltransferase [C 56.1 60 0.0013 34.3 8.6 96 353-453 348-443 (465)
62 PRK10307 putative glycosyl tra 55.5 12 0.00025 39.3 3.6 96 352-457 294-396 (412)
63 cd03812 GT1_CapH_like This fam 51.8 44 0.00096 33.4 7.0 40 353-393 258-297 (358)
64 PLN02939 transferase, transfer 50.9 27 0.00058 41.5 5.8 38 356-393 851-888 (977)
65 PF13692 Glyco_trans_1_4: Glyc 44.6 24 0.00053 30.3 3.4 41 353-394 62-103 (135)
66 cd01635 Glycosyltransferase_GT 44.6 30 0.00065 31.5 4.2 41 353-394 173-213 (229)
67 PLN02605 monogalactosyldiacylg 44.4 42 0.00092 35.0 5.7 35 354-393 275-309 (382)
68 TIGR02468 sucrsPsyn_pln sucros 42.7 40 0.00088 40.4 5.6 93 354-457 560-659 (1050)
69 TIGR01133 murG undecaprenyldip 42.7 51 0.0011 33.2 5.9 35 354-393 243-277 (348)
70 cd03788 GT1_TPS Trehalose-6-Ph 38.8 31 0.00066 37.4 3.7 87 352-451 351-444 (460)
71 PRK05749 3-deoxy-D-manno-octul 38.3 42 0.00091 35.4 4.6 41 353-394 311-352 (425)
72 TIGR02918 accessory Sec system 35.7 72 0.0016 35.1 6.0 94 354-455 385-486 (500)
73 PRK15490 Vi polysaccharide bio 34.7 44 0.00096 37.5 4.1 41 353-394 464-504 (578)
74 TIGR03590 PseG pseudaminic aci 33.4 1.3E+02 0.0028 30.2 7.0 35 353-393 233-267 (279)
75 PF00919 UPF0004: Uncharacteri 32.6 43 0.00094 28.5 2.9 36 154-193 11-47 (98)
76 PLN00142 sucrose synthase 29.4 85 0.0018 36.8 5.4 97 355-459 659-761 (815)
77 PRK13608 diacylglycerol glucos 29.2 44 0.00096 35.1 2.9 86 354-451 266-354 (391)
78 TIGR02400 trehalose_OtsA alpha 29.0 1E+02 0.0022 33.5 5.8 82 352-447 346-435 (456)
79 COG1819 Glycosyl transferases, 28.6 7.4E+02 0.016 26.4 12.1 111 302-421 233-354 (406)
80 PRK00726 murG undecaprenyldiph 28.5 2.7E+02 0.0058 28.3 8.5 88 353-446 244-335 (357)
81 PF06258 Mito_fiss_Elm1: Mitoc 26.5 3E+02 0.0065 28.4 8.4 37 353-393 220-256 (311)
82 PLN02316 synthase/transferase 21.9 82 0.0018 38.0 3.5 38 357-394 915-952 (1036)
83 COG0438 RfaG Glycosyltransfera 20.4 1.2E+02 0.0025 28.8 3.7 40 353-394 268-308 (381)
84 PRK13609 diacylglycerol glucos 20.3 6.7E+02 0.014 25.7 9.7 35 354-393 266-300 (380)
85 TIGR02470 sucr_synth sucrose s 20.1 1.6E+02 0.0036 34.4 5.4 86 363-460 645-739 (784)
No 1
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=100.00 E-value=3e-67 Score=560.67 Aligned_cols=380 Identities=34% Similarity=0.542 Sum_probs=327.8
Q ss_pred CCCCceEEEeCCchhhhHHHHhhcccCC-CCCC---cCcccccCCCCCcccccCCCCCCCCCCcccccCchhhhHHHHHH
Q 011220 91 QCELGKIYVYDLPKALNEDLLQNCHELN-PWGS---RCDMLLNDGFGRQASALNGVVPENLVPAWHWTDQFVLEIIFHRR 166 (490)
Q Consensus 91 ~c~~~~VYvYdLP~~Fn~~ll~~c~~~~-~w~~---~C~~~~n~G~g~~~~~~~~~~~~~~~~~w~~t~qf~~E~ifh~r 166 (490)
.|.+..||||++|+.||.++++.|.... .|.. +|.+..|+++|+......+..+....++|+.|+||++|.+||++
T Consensus 69 ~~~~~~v~~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~E~~~~~~ 148 (464)
T KOG1021|consen 69 ICAGASVYVYNLPSGFDVSLLLFHKQIPTSPNNKKFMCSYKLNEKRGKVYVYHEGNKPLFHTPSWCLTDQYASEGIFHNR 148 (464)
T ss_pred cccCcceeeeccchhhhhhhhccCccccccCcchhhhhhhhhhcccCceEEecCCCCccccCCCcccccchhHHHHHHHH
Confidence 4999999999999999999999998875 5555 99998889998876655553344556899999999999999999
Q ss_pred h--ccCccccCCCCCceEEEEeccccccccccccCC---CChHHHhHHHHHHHHHHhcCcccccCCCCceEEeecccccc
Q 011220 167 I--LNHRCRTLEPESAAAFYIPFYVGLAVGKYLWSD---SSAKARDMHCDLMLKWVQDQPYWNRSDGWDHFTAMGRITWD 241 (490)
Q Consensus 167 L--l~s~~rT~DPeeAdlFyVP~y~~l~~~~~~~~~---~~~~~r~~~~~~l~~~L~~~PyWnRsgGrDHf~v~~~~~wd 241 (490)
+ ..++|||.||+|||+||||||++++..+++..+ .....++.++..++.|+++||||||++|+|||||++|+.|+
T Consensus 149 ~~~~~~~~Rt~dp~~Ad~f~vPf~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~W~Rs~G~DH~~v~~~~~~~ 228 (464)
T KOG1021|consen 149 MLRRESAFRTLDPLEADAFYVPFYASLDYNRALLWPDERVNAILRSILQDYIVALLSKQPYWNRSSGRDHFFVACHDWGD 228 (464)
T ss_pred HhcccCceecCChhhCcEEEEcceeeEehhhhcccCCcccchHHHHHHHHHHHHHHhcCchhhccCCCceEEEeCCcchh
Confidence 9 578999999999999999999999997764443 23345777889999999999999999999999999999999
Q ss_pred ccCCCCCCCCccccchHHHhhHHHhhhhcCCCCCceeeccCCCccCCCCCCCccccccccCCCCCceeeeecccccCCch
Q 011220 242 FRRSKDEDWGSSCIYKKAMRNITRLLIERNPWDYFDVGVPYPTGFHPRSASDVTQWQDYVRSRNRSSLYCFAGATRMVKN 321 (490)
Q Consensus 242 frr~~~~dwG~~~~~~p~~~n~~~l~ie~~~w~~~Dv~iPy~t~fhP~~~~~~~~w~~~~~~~~R~~L~~FaG~~~~~~~ 321 (490)
+++. .+||+.....+++.|.+.++.+..+|. +|+++||++.+||....+. .|+..+...+|++|++|+|+. .++
T Consensus 229 ~~~~--~~~~~~~~~i~~~~n~a~ls~~~~~~~-~dv~iP~~~~~~~~~~~~~-~~~~~~~~~~R~~L~~F~G~~--~~~ 302 (464)
T KOG1021|consen 229 FRRR--SDWGASISLIPEFCNGALLSLEFFPWN-KDVAIPYPTIPHPLSPPEN-SWQGGVPFSNRPILAFFAGAP--AGG 302 (464)
T ss_pred eeec--cchhhHHHHHHhhCCcceeecccccCC-CcccCCCccCcCccCcccc-ccccCCCCCCCceEEEEeccc--cCC
Confidence 8764 568887777788888878888777776 8999999999999998877 888888889999999999994 234
Q ss_pred hHHHHHHhhhhcCCCCeEEEecCCCccc-CChhhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccc
Q 011220 322 DFRSMLLSHCKNESGSCRVVDCEGTRCM-NGTSAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQY 400 (490)
Q Consensus 322 ~iR~~L~~~~~~~~~~~~~~~c~~~~c~-~~~~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y 400 (490)
.||++|+++|++.++.|..+.|..+.++ .+..+|++.|++|+|||||+||+++|+|+||||++|||||||+|+ .||
T Consensus 303 ~iR~~L~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~m~~S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~---~~l 379 (464)
T KOG1021|consen 303 QIRSILLDLWKKDPDTEVFVNCPRGKVSCDRPLNYMEGMQDSKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDG---IQL 379 (464)
T ss_pred cHHHHHHHHhhcCcCccccccCCCCccccCCcchHHHHhhcCeEEECCCCCCcccHhHHHHHHhCCccEEEcCC---ccc
Confidence 9999999999985556778888766443 456799999999999999999999999999999999999999996 677
Q ss_pred cccCCCCCCceEEEEeccccccCcccHHHHHhcCCHHHHHHHHHHHhh-hcceeEEecCCCCCCchhhHHHHHHHHHHHH
Q 011220 401 AWFLPDEPGSYSVFIDRNEVRNGTKSIKAVLESYSQEEVKRMRDKVID-YIPKFIYAKSREGLGTIKDAFDVAIDGVLRR 479 (490)
Q Consensus 401 ~~~LPfdw~~fSV~I~e~dv~~g~~~l~~iL~~Is~~~i~~Mr~~l~~-v~~~f~Y~~p~~~~~~~~DAfd~~l~~l~~R 479 (490)
+|+.+-||++|||+|++++|+++ |.++|.+|+++++.+||+++++ +.++|.+..+ .....+|||++++++|++|
T Consensus 380 pf~~~~d~~~fSV~v~~~~v~~~---~~~iL~~i~~~~~~~m~~~v~~~v~r~~~~~~~--~~~~~~da~~~~~~~v~~r 454 (464)
T KOG1021|consen 380 PFGDVLDWTEFSVFVPEKDVPEL---IKNILLSIPEEEVLRMRENVIRLVPRHFLKKPP--GPPKRGDAFHMILHSLWRR 454 (464)
T ss_pred CcCCCccceEEEEEEEHHHhhhH---HHHHHHhcCHHHHHHHHHHHHHHHHhhEEeCCC--CCCCcchhHHHHHhhhhhc
Confidence 78888899999999999999944 4999999999999999999995 7888888774 2345599999999999999
Q ss_pred HHhhh
Q 011220 480 IKEQQ 484 (490)
Q Consensus 480 i~~~~ 484 (490)
+.+.+
T Consensus 455 ~~~~~ 459 (464)
T KOG1021|consen 455 LHKLR 459 (464)
T ss_pred ccccc
Confidence 87765
No 2
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=100.00 E-value=4.3e-53 Score=425.07 Aligned_cols=285 Identities=30% Similarity=0.499 Sum_probs=216.1
Q ss_pred CCCCceEEEeCCchhhhHHHHhhcccCCCCCCcCcccccCCCCCcccccCCCCCCCCCCcccccCchhhhHHHHHHhccC
Q 011220 91 QCELGKIYVYDLPKALNEDLLQNCHELNPWGSRCDMLLNDGFGRQASALNGVVPENLVPAWHWTDQFVLEIIFHRRILNH 170 (490)
Q Consensus 91 ~c~~~~VYvYdLP~~Fn~~ll~~c~~~~~w~~~C~~~~n~G~g~~~~~~~~~~~~~~~~~w~~t~qf~~E~ifh~rLl~s 170 (490)
+|.+++|||||||++||.+++..... ....|+.++||++|.+||++|++|
T Consensus 1 ~~~~lkVYVY~lp~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~e~~l~~~l~~s 50 (302)
T PF03016_consen 1 SHRGLKVYVYPLPPKFNKDLLDPRED------------------------------EQCSWYETSQYALEVILHEALLNS 50 (302)
T ss_pred CCCCCEEEEEeCCccccccceecccc------------------------------ccCCCcccccchHHHHHHHHHHhC
Confidence 58999999999999999999922110 023566789999999999999999
Q ss_pred ccccCCCCCceEEEEeccccccccccccC-CCChHHHhHHHHHHHHHHhcCcccccCCCCceEEeeccccccccCCCCCC
Q 011220 171 RCRTLEPESAAAFYIPFYVGLAVGKYLWS-DSSAKARDMHCDLMLKWVQDQPYWNRSDGWDHFTAMGRITWDFRRSKDED 249 (490)
Q Consensus 171 ~~rT~DPeeAdlFyVP~y~~l~~~~~~~~-~~~~~~r~~~~~~l~~~L~~~PyWnRsgGrDHf~v~~~~~wdfrr~~~~d 249 (490)
++||.||+|||+||||+|.++.. .+.+. +......+.....+..+++++|||||++|+||||+.+ ++
T Consensus 51 ~~~T~dp~eAdlF~vP~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~w~r~~G~dH~~~~~-----------~~ 118 (302)
T PF03016_consen 51 PFRTDDPEEADLFFVPFYSSCYF-HHWWGSPNSGADRDSLSDALRHLLASYPYWNRSGGRDHFFVNS-----------HD 118 (302)
T ss_pred CcEeCCHHHCeEEEEEccccccc-ccccCCccchhhHHHHHHHHHHHHhcCchhhccCCCCeEEEec-----------cc
Confidence 99999999999999999999884 11222 2222345556677788888999999999999999997 56
Q ss_pred CCccc-cchHHHhhHHHhhh-------hcCCCCCceeeccCCCccCCCCCCCccccccccCCCCCceeeeecccccC---
Q 011220 250 WGSSC-IYKKAMRNITRLLI-------ERNPWDYFDVGVPYPTGFHPRSASDVTQWQDYVRSRNRSSLYCFAGATRM--- 318 (490)
Q Consensus 250 wG~~~-~~~p~~~n~~~l~i-------e~~~w~~~Dv~iPy~t~fhP~~~~~~~~w~~~~~~~~R~~L~~FaG~~~~--- 318 (490)
||.+. ...+.+.+.+..++ ...++.++||++|+....++... ...+ ......+|++|++|+|+.++
T Consensus 119 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~P~~~~~~~~~~--~~~~-~~~~~~~R~~l~~f~g~~~~~~~ 195 (302)
T PF03016_consen 119 RGGCSFDRNPRLMNNSIRAVVAFSSFSSSCFRPGFDIVIPPFVPPSSLPD--WRPW-PQRPPARRPYLLFFAGTIRPSSN 195 (302)
T ss_pred cccccccccHhhhccchhheeccCCCCcCcccCCCCeeccccccccccCC--cccc-ccCCccCCceEEEEeeecccccc
Confidence 65543 22334344433333 33467789999998643322111 1111 23457899999999999877
Q ss_pred -CchhHHHHHHhhhhcCCCCeEEEecCCCcccCChhhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCccc
Q 011220 319 -VKNDFRSMLLSHCKNESGSCRVVDCEGTRCMNGTSAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAY 397 (490)
Q Consensus 319 -~~~~iR~~L~~~~~~~~~~~~~~~c~~~~c~~~~~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y 397 (490)
.+..+|..|++.|++.++. .+.. ....+ ....+|.+.|++|+|||+|+|++++++||+|||++|||||||+|+
T Consensus 196 ~~~~~~r~~l~~~~~~~~~~-~~~~-~~~~~-~~~~~~~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~--- 269 (302)
T PF03016_consen 196 DYSGGVRQRLLDECKSDPDF-RCSD-GSETC-PSPSEYMELLRNSKFCLCPRGDGPWSRRLYEALAAGCIPVIISDD--- 269 (302)
T ss_pred ccchhhhhHHHHhcccCCcc-eeee-ccccc-ccchHHHHhcccCeEEEECCCCCcccchHHHHhhhceeeEEecCc---
Confidence 2358999999999876541 1111 11122 234679999999999999999999999999999999999999986
Q ss_pred ccccccCCC----CCCceEEEEeccccccCcccHHHHHhcC
Q 011220 398 FQYAWFLPD----EPGSYSVFIDRNEVRNGTKSIKAVLESY 434 (490)
Q Consensus 398 ~~y~~~LPf----dw~~fSV~I~e~dv~~g~~~l~~iL~~I 434 (490)
++||| ||++|||+|++++++ +|+++|++|
T Consensus 270 ----~~lPf~~~ldw~~fsv~v~~~~~~----~l~~iL~~i 302 (302)
T PF03016_consen 270 ----YVLPFEDVLDWSRFSVRVPEADLP----ELPEILRSI 302 (302)
T ss_pred ----ccCCcccccCHHHEEEEECHHHHH----HHHHHHhcC
Confidence 45888 899999999999998 999999987
No 3
>KOG2264 consensus Exostosin EXT1L [Signal transduction mechanisms]
Probab=99.91 E-value=2.2e-24 Score=224.63 Aligned_cols=332 Identities=17% Similarity=0.250 Sum_probs=220.6
Q ss_pred CCCceEEEeCCchhhh-HHHHhhcccCCCCC-CcCcccccCCCCCcccccCCCCCCCCCCcccccCchhhhHHHHHHhcc
Q 011220 92 CELGKIYVYDLPKALN-EDLLQNCHELNPWG-SRCDMLLNDGFGRQASALNGVVPENLVPAWHWTDQFVLEIIFHRRILN 169 (490)
Q Consensus 92 c~~~~VYvYdLP~~Fn-~~ll~~c~~~~~w~-~~C~~~~n~G~g~~~~~~~~~~~~~~~~~w~~t~qf~~E~ifh~rLl~ 169 (490)
..++.+.--.+|.+.+ ..+...|+..+|+. ++|+. ++||+.++|+.+-.......+.|. -..|.+.+.+
T Consensus 156 ~LP~sllP~~~pr~l~pp~~~~~c~lhncfdySRCsl--tSgfPVYvyd~D~~~~G~~~d~~l-------k~~fq~t~~~ 226 (907)
T KOG2264|consen 156 FLPFSLLPLQIPRELEPPSQISPCQLHNCFDYSRCSL--TSGFPVYVYDSDIITSGQSEDEWL-------KQVFQETIPN 226 (907)
T ss_pred eeccccCcccCcccCCCccccCcccchhccccccccc--cCCceeEEeccceeecccchHHHH-------HHHHHHhccc
Confidence 4444444555555543 24667788888887 79986 679999988754432222222222 2345677888
Q ss_pred CccccCCCCCceEEEEeccccccccccccCCCChHHHhHHHHHHHHHHhcCcccccCCCCceEEeeccccccccCCCCCC
Q 011220 170 HRCRTLEPESAAAFYIPFYVGLAVGKYLWSDSSAKARDMHCDLMLKWVQDQPYWNRSDGWDHFTAMGRITWDFRRSKDED 249 (490)
Q Consensus 170 s~~rT~DPeeAdlFyVP~y~~l~~~~~~~~~~~~~~r~~~~~~l~~~L~~~PyWnRsgGrDHf~v~~~~~wdfrr~~~~d 249 (490)
..+.|.||+.||++.+-+..-.. +.. .. ..+ ++-|-+.||| |++|+||++++.. |. .|
T Consensus 227 n~~~ve~pd~ACiyi~lvge~q~-------P~~-l~----p~e-leklyslp~w-~~dg~Nhvl~Nl~------r~--s~ 284 (907)
T KOG2264|consen 227 NVYLVETPDKACIYIHLVGEIQS-------PVV-LT----PAE-LEKLYSLPHW-RTDGFNHVLFNLG------RP--SD 284 (907)
T ss_pred ceeEeeCCCccEEEEEEeccccC-------CCc-CC----hHh-hhhhhcCccc-cCCCcceEEEEcc------Cc--cc
Confidence 89999999999999886542111 100 00 122 2347789999 8999999999841 11 11
Q ss_pred CCccccch-HHHhhHHH-hhhhc-CCCCCceeeccCCCccCCCCCCCcccccc--ccCCCCCceeeeecccccCCc---h
Q 011220 250 WGSSCIYK-KAMRNITR-LLIER-NPWDYFDVGVPYPTGFHPRSASDVTQWQD--YVRSRNRSSLYCFAGATRMVK---N 321 (490)
Q Consensus 250 wG~~~~~~-p~~~n~~~-l~ie~-~~w~~~Dv~iPy~t~fhP~~~~~~~~w~~--~~~~~~R~~L~~FaG~~~~~~---~ 321 (490)
-. +.++. ..++.+.. .+.+. ..++++|++||+. .|+... ++|+. .+-+.+|++|+.|+|.+++.. +
T Consensus 285 ~~-n~lyn~~t~raivvQssf~~~q~RpgfDl~V~pv--~h~~~e---~~~~e~~p~vP~~RkyL~t~qgki~~~~ssLn 358 (907)
T KOG2264|consen 285 TQ-NLLYNFQTGRAIVVQSSFYTVQIRPGFDLPVDPV--NHIAVE---KNFVELTPLVPFQRKYLITLQGKIESDNSSLN 358 (907)
T ss_pred cc-cceeEeccCceEEEeecceeeeeccCCCcccCcc--cccccC---ccceecCcccchhhheeEEEEeeecccccccc
Confidence 11 12221 11222211 11122 3678999988764 355443 34543 344789999999999887622 2
Q ss_pred hHHHHHHhhhhcCC-----C-CeEEEecCC-------------CcccCChhhHHHhhccCeEEec-cCCCCCCc-----h
Q 011220 322 DFRSMLLSHCKNES-----G-SCRVVDCEG-------------TRCMNGTSAILETFLDSVFCLQ-PRGDSFTR-----R 376 (490)
Q Consensus 322 ~iR~~L~~~~~~~~-----~-~~~~~~c~~-------------~~c~~~~~~y~~~m~~S~FCL~-P~Gds~ss-----r 376 (490)
.++....++..+-+ | .+..+.|.. ..|++. +...+++..|+|||. |+||.--. .
T Consensus 359 ~~~aF~~e~~adp~~~a~qds~i~qv~c~~t~k~Qe~~SLpewalcg~~-~~RrqLlk~STF~lilpp~d~rv~S~~~~~ 437 (907)
T KOG2264|consen 359 EFSAFSEELSADPSRRAVQDSPIVQVKCSFTCKNQENCSLPEWALCGER-ERRRQLLKSSTFCLILPPGDPRVISEMFFQ 437 (907)
T ss_pred hhhhhHHHhccCCcccccccCceEEEEEeeccccCCCCCcchhhhccch-HHHHHHhccceeEEEecCCCcchhhHHHHH
Confidence 23433322222111 1 233444531 145543 467899999999995 88987432 6
Q ss_pred hHHHHHhhCceeEEeecCcccccccccCCC----CCCceEEEEeccccccCcccHHHHHhcCCHHHHHHHHHHHhhhcce
Q 011220 377 SIFDCMVAGSIPVFFWKRSAYFQYAWFLPD----EPGSYSVFIDRNEVRNGTKSIKAVLESYSQEEVKRMRDKVIDYIPK 452 (490)
Q Consensus 377 rl~DAi~aGCIPViisd~~~y~~y~~~LPf----dw~~fSV~I~e~dv~~g~~~l~~iL~~Is~~~i~~Mr~~l~~v~~~ 452 (490)
|+++|+..||||||+++.. .||| ||.+.++++|..+++ +++.+|+++.+.++.+||+++ +
T Consensus 438 r~~eaL~~GavPviLg~~~-------~LPyqd~idWrraal~lPkaR~t----E~HFllrs~~dsDll~mRRqG-----R 501 (907)
T KOG2264|consen 438 RFLEALQLGAVPVILGNSQ-------LLPYQDLIDWRRAALRLPKARLT----EAHFLLRSFEDSDLLEMRRQG-----R 501 (907)
T ss_pred HHHHHHhcCCeeEEecccc-------ccchHHHHHHHHHhhhCCccccc----hHHHHHHhcchhhHHHHHhhh-----h
Confidence 8999999999999999752 4898 899999999999999 999999999999999999997 7
Q ss_pred eEEecCCCCCCchhhHHHHHHHHHHHHH
Q 011220 453 FIYAKSREGLGTIKDAFDVAIDGVLRRI 480 (490)
Q Consensus 453 f~Y~~p~~~~~~~~DAfd~~l~~l~~Ri 480 (490)
|.|+.+.+.. .-.++++++.|+.|+
T Consensus 502 l~wEtYls~~---~~~~~tvlA~lR~rl 526 (907)
T KOG2264|consen 502 LFWETYLSDR---HLLARTVLAALRYRL 526 (907)
T ss_pred hhHHHHhhHH---HHHHHHHHHHHHHhh
Confidence 9999988753 557899999999987
No 4
>KOG1022 consensus Acetylglucosaminyltransferase EXT2/exostosin 2 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=99.16 E-value=2e-10 Score=120.86 Aligned_cols=264 Identities=13% Similarity=0.023 Sum_probs=158.9
Q ss_pred HHhccCccccCCCCCceEEEEeccccccccccccCCCChHHHhHHHHHHHHHHhcCcccccCCCCceEEeeccccccccC
Q 011220 165 RRILNHRCRTLEPESAAAFYIPFYVGLAVGKYLWSDSSAKARDMHCDLMLKWVQDQPYWNRSDGWDHFTAMGRITWDFRR 244 (490)
Q Consensus 165 ~rLl~s~~rT~DPeeAdlFyVP~y~~l~~~~~~~~~~~~~~r~~~~~~l~~~L~~~PyWnRsgGrDHf~v~~~~~wdfrr 244 (490)
+....|.+.|.|+++||+| +|-..-+. +... +.. .....|.+.-.|.| |.+|..+..-+.
T Consensus 130 eA~~~S~yyt~n~N~aclf-~Ps~d~ln--Qn~l-------~~k---l~~~ala~l~~wdr--g~nH~~fnmLpG----- 189 (691)
T KOG1022|consen 130 EAWHLSFYYTFNYNGACLF-MPSSDELN--QNPL-------SWK---LEKVALAKLLVWDR--GVNHEGFNMLPG----- 189 (691)
T ss_pred HHHHhccceecCCCceEEE-ecchhhhc--cCcc-------hHH---HHHHHHhcccchhc--ccceeeEeeccC-----
Confidence 4455789999999999999 88433222 1111 011 11223556679998 999999875322
Q ss_pred CCCCCCCccccchHHHhhHHHhhhh---cCCCCCceeeccCCCccCCCCCCCccccccccCCCCCceeeeecccccCCch
Q 011220 245 SKDEDWGSSCIYKKAMRNITRLLIE---RNPWDYFDVGVPYPTGFHPRSASDVTQWQDYVRSRNRSSLYCFAGATRMVKN 321 (490)
Q Consensus 245 ~~~~dwG~~~~~~p~~~n~~~l~ie---~~~w~~~Dv~iPy~t~fhP~~~~~~~~w~~~~~~~~R~~L~~FaG~~~~~~~ 321 (490)
++++..+. ...+.. ++.-..-. -.++.++||.+|--+ |. ..+. ....+..|.+++-=.|-- +..
T Consensus 190 -g~p~ynta-ldv~~d-~a~~~gggf~tW~yr~g~dv~ipv~S---p~-~v~~----~~~~~g~r~~~l~~~q~n--~~p 256 (691)
T KOG1022|consen 190 -GDPTYNTA-LDVGQD-EAWYSGGGFGTWKYRKGNDVYIPVRS---PG-NVGR----AFLYDGSRYRVLQDCQEN--YGP 256 (691)
T ss_pred -CCCCcccc-ccCCcc-eeEEecCCcCcccccCCCcccccccc---cc-ccCc----cccCCccceeeeeccccc--cch
Confidence 22322211 111110 11110101 124567888888632 32 1111 122345565554443311 334
Q ss_pred hHHHHHHhhhhcCCCCeEEE-ecCC------CcccCC-hhhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeec
Q 011220 322 DFRSMLLSHCKNESGSCRVV-DCEG------TRCMNG-TSAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWK 393 (490)
Q Consensus 322 ~iR~~L~~~~~~~~~~~~~~-~c~~------~~c~~~-~~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd 393 (490)
.+|..+++.....++....+ .|.. +.|.+. .-+|...++..+||+.-+|-+-+..-+.+-+.+||||||..|
T Consensus 257 r~r~~l~el~~kh~e~~l~l~~c~nlsl~~r~~~qhH~~~~yp~~l~~~~fc~~~R~~r~gq~~lv~~~~a~c~pvi~vd 336 (691)
T KOG1022|consen 257 RIRVSLIELLSKHEERELELPFCLNLSLNSRGVRQHHFDVKYPSSLEFIGFCDGDRVTRGGQFHLVILGYASCAPVISVD 336 (691)
T ss_pred HhHHhHHHHHhhccceEEecchhccccccccchhhcccccccccccceeeeEeccccccCCccceehhhhcccceeeeee
Confidence 66666655544333322222 2321 233222 237889999999999999888888889999999999999999
Q ss_pred CcccccccccCCC----CCCceEEEEeccccccCcccHHHHHhcCCHHHHHHHHHHHhhhcceeEEecCCCCCCchhhHH
Q 011220 394 RSAYFQYAWFLPD----EPGSYSVFIDRNEVRNGTKSIKAVLESYSQEEVKRMRDKVIDYIPKFIYAKSREGLGTIKDAF 469 (490)
Q Consensus 394 ~~~y~~y~~~LPf----dw~~fSV~I~e~dv~~g~~~l~~iL~~Is~~~i~~Mr~~l~~v~~~f~Y~~p~~~~~~~~DAf 469 (490)
. ..||| ||...||.++|..+. ++.+.|++|+...+-+||.+.... ++ ....+ +.-.+
T Consensus 337 ~-------y~lpf~~Vvdw~~aSv~~~e~~~~----~v~~~l~~i~~~~i~sl~~r~~~~--rl---~rf~~---~~~~~ 397 (691)
T KOG1022|consen 337 I-------YLLPFLGVVDWIVASVWCMEYYAG----KVMDALLNIETAGICSLQLRRIGS--RL---NRFPP---FKRGF 397 (691)
T ss_pred h-------hhhhhhhhhhceeeeEEeehhhHH----HHHHHhhcchhcchhhhhhhhhhh--hH---hhcch---HHHHH
Confidence 6 35898 899999999999888 899999999999999999875322 22 22222 23345
Q ss_pred HHHHHHHHHHH
Q 011220 470 DVAIDGVLRRI 480 (490)
Q Consensus 470 d~~l~~l~~Ri 480 (490)
=.++..+..|+
T Consensus 398 l~~~~~i~~~l 408 (691)
T KOG1022|consen 398 LLLLSSIGKRL 408 (691)
T ss_pred HHHHHHHhhhh
Confidence 55566666665
No 5
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=95.70 E-value=0.066 Score=53.41 Aligned_cols=93 Identities=12% Similarity=0.207 Sum_probs=60.6
Q ss_pred hhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccccCcccHHHHHh
Q 011220 353 SAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAVLE 432 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~l~~iL~ 432 (490)
.++.+.|..|.+++.|.+.......++|||.+|| |||.++...... .+ .-....+.++..+.. ++.+.+.
T Consensus 258 ~~~~~~~~~~d~~l~~s~~e~~~~~~lEa~a~g~-PvI~~~~~~~~~---~i--~~~~~g~~~~~~~~~----~l~~~i~ 327 (364)
T cd03814 258 EELAAAYASADVFVFPSRTETFGLVVLEAMASGL-PVVAPDAGGPAD---IV--TDGENGLLVEPGDAE----AFAAALA 327 (364)
T ss_pred HHHHHHHHhCCEEEECcccccCCcHHHHHHHcCC-CEEEcCCCCchh---hh--cCCcceEEcCCCCHH----HHHHHHH
Confidence 4678899999999999877666677999999999 788887532110 01 112345555555543 3444443
Q ss_pred cC--CHHHHHHHHHHHhhhcceeEE
Q 011220 433 SY--SQEEVKRMRDKVIDYIPKFIY 455 (490)
Q Consensus 433 ~I--s~~~i~~Mr~~l~~v~~~f~Y 455 (490)
.+ .+++..+|.++..+....+.|
T Consensus 328 ~l~~~~~~~~~~~~~~~~~~~~~~~ 352 (364)
T cd03814 328 ALLADPELRRRMAARARAEAERRSW 352 (364)
T ss_pred HHHcCHHHHHHHHHHHHHHHhhcCH
Confidence 33 467778888887665544433
No 6
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=95.15 E-value=0.16 Score=50.63 Aligned_cols=93 Identities=18% Similarity=0.258 Sum_probs=60.4
Q ss_pred hhHHHhhccCeEEeccCCCCCC-----chhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccccCcccH
Q 011220 353 SAILETFLDSVFCLQPRGDSFT-----RRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSI 427 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~s-----srrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~l 427 (490)
.++.+.|+.+.+++.|...+.. ...+.|||.+|| |||.++...... .+ .-....+.++.+++. ++
T Consensus 286 ~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~-pvi~~~~~~~~~---~~--~~~~~g~~~~~~~~~----~l 355 (394)
T cd03794 286 EELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGK-PVLASVDGESAE---LV--EEAGAGLVVPPGDPE----AL 355 (394)
T ss_pred HHHHHHHHhhCeeEEeccCcccccccCchHHHHHHHCCC-cEEEecCCCchh---hh--ccCCcceEeCCCCHH----HH
Confidence 4678899999999999776543 455899999997 888887532110 01 111455666665555 55
Q ss_pred HHHHhcC--CHHHHHHHHHHHhhhcc-eeEE
Q 011220 428 KAVLESY--SQEEVKRMRDKVIDYIP-KFIY 455 (490)
Q Consensus 428 ~~iL~~I--s~~~i~~Mr~~l~~v~~-~f~Y 455 (490)
.+.|..+ .+++..+|.++..+... +|-|
T Consensus 356 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~ 386 (394)
T cd03794 356 AAAILELLDDPEERAEMGENGRRYVEEKFSR 386 (394)
T ss_pred HHHHHHHHhChHHHHHHHHHHHHHHHHhhcH
Confidence 5555554 57778888887655443 4444
No 7
>PF00852 Glyco_transf_10: Glycosyltransferase family 10 (fucosyltransferase); InterPro: IPR001503 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 10 GT10 from CAZY comprises enzymes with two known activities; galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) and galactoside 3-fucosyltransferase (2.4.1.152 from EC). The galactoside 3-fucosyltransferases display similarities with the alpha-2 and alpha-6-fucosyltranferases []. The biosynthesis of the carbohydrate antigen sialyl Lewis X (sLe(x)) is dependent on the activity of an galactoside 3-fucosyltransferase. This enzyme catalyses the transfer of fucose from GDP-beta-fucose to the 3-OH of N-acetylglucosamine present in lactosamine acceptors []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) belongs to the Lewis blood group system and is associated with Le(a/b) antigen. ; GO: 0008417 fucosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 2NZX_B 2NZW_C 2NZY_C.
Probab=94.22 E-value=0.11 Score=54.33 Aligned_cols=112 Identities=14% Similarity=0.253 Sum_probs=60.3
Q ss_pred ceeeeecccccCCchhHHHHHHhhhhcCCCCeEEEecCCCccc----CChhhHHHhhccCeEEeccC---CCCCCchhHH
Q 011220 307 SSLYCFAGATRMVKNDFRSMLLSHCKNESGSCRVVDCEGTRCM----NGTSAILETFLDSVFCLQPR---GDSFTRRSIF 379 (490)
Q Consensus 307 ~~L~~FaG~~~~~~~~iR~~L~~~~~~~~~~~~~~~c~~~~c~----~~~~~y~~~m~~S~FCL~P~---Gds~ssrrl~ 379 (490)
+..+.++.+... ..-|..+++++...- .+..+ |.|. .......+.+++-+|.|+.. ..+..+--+|
T Consensus 176 ~~~~w~~Snc~~--~~~R~~~~~~L~~~~-~vd~y----G~c~~~~~~~~~~~~~~~~~ykF~lafENs~c~dYiTEK~~ 248 (349)
T PF00852_consen 176 KLAAWIVSNCNP--HSGREEYVRELSKYI-PVDSY----GKCGNNNPCPRDCKLELLSKYKFYLAFENSNCPDYITEKFW 248 (349)
T ss_dssp EEEEE--S-S----H-HHHHHHHHHHTTS--EEE-----SSTT--SSS--S-HHHHHHTEEEEEEE-SS--TT---HHHH
T ss_pred ceEEEEeeCcCC--cccHHHHHHHHHhhc-CeEcc----CCCCCCCCcccccccccccCcEEEEEecCCCCCCCCCHHHH
Confidence 444555555443 233888888887653 22222 2341 11235889999999999753 4566677799
Q ss_pred HHHhhCceeEEee--cCcccccccccCCCCCCceEEEEeccccccCcccHHHHHhcCC
Q 011220 380 DCMVAGSIPVFFW--KRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAVLESYS 435 (490)
Q Consensus 380 DAi~aGCIPViis--d~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~l~~iL~~Is 435 (490)
+|+.+|||||+++ ... |. -.+|-+ + +|..+|..+-. +|.+.|+.+.
T Consensus 249 ~al~~g~VPI~~G~~~~~-~~---~~~P~~--S---fI~~~df~s~~-~La~yl~~l~ 296 (349)
T PF00852_consen 249 NALLAGTVPIYWGPPRPN-YE---EFAPPN--S---FIHVDDFKSPK-ELADYLKYLD 296 (349)
T ss_dssp HHHHTTSEEEEES---TT-HH---HHS-GG--G---SEEGGGSSSHH-HHHHHHHHHH
T ss_pred HHHHCCeEEEEECCEecc-cc---cCCCCC--C---ccchhcCCCHH-HHHHHHHHHh
Confidence 9999999999999 432 22 235542 1 34444443111 6777777764
No 8
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=93.92 E-value=0.45 Score=46.77 Aligned_cols=87 Identities=14% Similarity=0.165 Sum_probs=55.3
Q ss_pred hhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccccCcccHHHHHh
Q 011220 353 SAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAVLE 432 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~l~~iL~ 432 (490)
.+..+.|+.|.+++.|.........++|||.+|| |||.+|...... . + +-....+.++.++.. ++.+.+.
T Consensus 255 ~~~~~~~~~adi~i~ps~~e~~~~~~~Ea~~~G~-Pvi~s~~~~~~~--~-i--~~~~~g~~~~~~~~~----~~~~~i~ 324 (359)
T cd03808 255 DDVPELLAAADVFVLPSYREGLPRVLLEAMAMGR-PVIATDVPGCRE--A-V--IDGVNGFLVPPGDAE----ALADAIE 324 (359)
T ss_pred ccHHHHHHhccEEEecCcccCcchHHHHHHHcCC-CEEEecCCCchh--h-h--hcCcceEEECCCCHH----HHHHHHH
Confidence 3567889999999999876655667999999995 788887532111 0 1 112445666665554 4445444
Q ss_pred cC--CHHHHHHHHHHHhhh
Q 011220 433 SY--SQEEVKRMRDKVIDY 449 (490)
Q Consensus 433 ~I--s~~~i~~Mr~~l~~v 449 (490)
.+ .++...+|.++..+.
T Consensus 325 ~l~~~~~~~~~~~~~~~~~ 343 (359)
T cd03808 325 RLIEDPELRARMGQAARKR 343 (359)
T ss_pred HHHhCHHHHHHHHHHHHHH
Confidence 43 356677776665443
No 9
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=93.65 E-value=0.51 Score=46.60 Aligned_cols=91 Identities=10% Similarity=0.084 Sum_probs=56.0
Q ss_pred hhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccccCcccHHHHHh
Q 011220 353 SAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAVLE 432 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~l~~iL~ 432 (490)
.+..+.|+.+.+++.|.........+.|||.+|| |||.++..... ++ -.+..+.++.++.. ++.+.+.
T Consensus 260 ~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~g~-PvI~~~~~~~~----e~---~~~~g~~~~~~~~~----~l~~~i~ 327 (365)
T cd03807 260 SDVPALLNALDVFVLSSLSEGFPNVLLEAMACGL-PVVATDVGDNA----EL---VGDTGFLVPPGDPE----ALAEAIE 327 (365)
T ss_pred ccHHHHHHhCCEEEeCCccccCCcHHHHHHhcCC-CEEEcCCCChH----HH---hhcCCEEeCCCCHH----HHHHHHH
Confidence 3567889999999999877666667999999996 78888753211 01 11245566655544 4444444
Q ss_pred cC--CHHHHHHHHHHHhh-hcceeEE
Q 011220 433 SY--SQEEVKRMRDKVID-YIPKFIY 455 (490)
Q Consensus 433 ~I--s~~~i~~Mr~~l~~-v~~~f~Y 455 (490)
.+ .+++..+|.++..+ +..+|.|
T Consensus 328 ~l~~~~~~~~~~~~~~~~~~~~~~s~ 353 (365)
T cd03807 328 ALLADPALRQALGEAARERIEENFSI 353 (365)
T ss_pred HHHhChHHHHHHHHHHHHHHHHhCCH
Confidence 33 23566666666544 3344544
No 10
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=93.36 E-value=0.073 Score=48.40 Aligned_cols=85 Identities=15% Similarity=0.266 Sum_probs=52.8
Q ss_pred hhhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccccCcccHHHHH
Q 011220 352 TSAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAVL 431 (490)
Q Consensus 352 ~~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~l~~iL 431 (490)
..++.+.++.|.+.++|.........+.|||.+|| |||.++..... + .+. + ..-.+.++..++. ++.+.+
T Consensus 83 ~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~-pvI~~~~~~~~--e-~~~-~-~~~g~~~~~~~~~----~l~~~i 152 (172)
T PF00534_consen 83 DDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGC-PVIASDIGGNN--E-IIN-D-GVNGFLFDPNDIE----ELADAI 152 (172)
T ss_dssp HHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT--EEEEESSTHHH--H-HSG-T-TTSEEEESTTSHH----HHHHHH
T ss_pred ccccccccccceecccccccccccccccccccccc-ceeeccccCCc--e-eec-c-ccceEEeCCCCHH----HHHHHH
Confidence 35789999999999999988888888999999999 66677642111 1 111 1 1134566655555 566666
Q ss_pred hcCC--HHHHHHHHHHH
Q 011220 432 ESYS--QEEVKRMRDKV 446 (490)
Q Consensus 432 ~~Is--~~~i~~Mr~~l 446 (490)
..+- ++....|.++.
T Consensus 153 ~~~l~~~~~~~~l~~~~ 169 (172)
T PF00534_consen 153 EKLLNDPELRQKLGKNA 169 (172)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHCCHHHHHHHHHHh
Confidence 5554 34455565554
No 11
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=93.18 E-value=0.48 Score=46.32 Aligned_cols=94 Identities=14% Similarity=0.119 Sum_probs=60.6
Q ss_pred hhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccccCcccHHHHHh
Q 011220 353 SAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAVLE 432 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~l~~iL~ 432 (490)
.+..+.|+++.+++.|.........++|||.+||.. |.++... .+. ++ .+-....+.++..++. ++.+.+.
T Consensus 244 ~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~a~G~Pv-i~~~~~~-~~~--~~-~~~~~~g~~~~~~~~~----~~~~~i~ 314 (348)
T cd03820 244 KNIEEYYAKASIFVLTSRFEGFPMVLLEAMAFGLPV-ISFDCPT-GPS--EI-IEDGVNGLLVPNGDVE----ALAEALL 314 (348)
T ss_pred chHHHHHHhCCEEEeCccccccCHHHHHHHHcCCCE-EEecCCC-chH--hh-hccCcceEEeCCCCHH----HHHHHHH
Confidence 467889999999999986655556799999999865 5555311 110 11 1222356667766655 5555555
Q ss_pred cC--CHHHHHHHHHHHhhhcceeEE
Q 011220 433 SY--SQEEVKRMRDKVIDYIPKFIY 455 (490)
Q Consensus 433 ~I--s~~~i~~Mr~~l~~v~~~f~Y 455 (490)
.+ .++...+|.++..+....|-|
T Consensus 315 ~ll~~~~~~~~~~~~~~~~~~~~~~ 339 (348)
T cd03820 315 RLMEDEELRKRMGANARESAERFSI 339 (348)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHhCH
Confidence 54 577788888887666655544
No 12
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=92.89 E-value=0.14 Score=51.26 Aligned_cols=93 Identities=11% Similarity=0.169 Sum_probs=61.7
Q ss_pred hhHHHhhccCeEEeccCCCC--CCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccccCcccHHHH
Q 011220 353 SAILETFLDSVFCLQPRGDS--FTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAV 430 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds--~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~l~~i 430 (490)
.++.+.|+.|.+++.|.... ..+..+.|||.+|+ |||.+|... . +. + .+ ..-.+.++..++. ++.+.
T Consensus 259 ~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~-PvI~~~~~~-~--~~-i-~~-~~~g~~~~~~d~~----~~~~~ 327 (366)
T cd03822 259 EELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGK-PVISTPVGH-A--EE-V-LD-GGTGLLVPPGDPA----ALAEA 327 (366)
T ss_pred HHHHHHHhhcCEEEecccccccccchHHHHHHHcCC-CEEecCCCC-h--he-e-ee-CCCcEEEcCCCHH----HHHHH
Confidence 46789999999999998777 66667999999999 999987431 1 01 1 11 2234555555544 45555
Q ss_pred HhcC--CHHHHHHHHHHHhhhcceeEEe
Q 011220 431 LESY--SQEEVKRMRDKVIDYIPKFIYA 456 (490)
Q Consensus 431 L~~I--s~~~i~~Mr~~l~~v~~~f~Y~ 456 (490)
|..+ .+++..+|+++..+....+.|+
T Consensus 328 l~~l~~~~~~~~~~~~~~~~~~~~~s~~ 355 (366)
T cd03822 328 IRRLLADPELAQALRARAREYARAMSWE 355 (366)
T ss_pred HHHHHcChHHHHHHHHHHHHHHhhCCHH
Confidence 5443 2467788888887766655443
No 13
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=92.87 E-value=0.14 Score=51.29 Aligned_cols=92 Identities=14% Similarity=0.267 Sum_probs=59.8
Q ss_pred hhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccccCcccHHHHHh
Q 011220 353 SAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAVLE 432 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~l~~iL~ 432 (490)
.++.+.++.+.+++.|.-.......++|||.+|| |||.++.... +---.+..+.++.++.. ++.+.|.
T Consensus 264 ~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~-pvI~~~~~~~-------~e~~~~~~~~~~~~~~~----~~~~~i~ 331 (365)
T cd03809 264 EELAALYRGARAFVFPSLYEGFGLPVLEAMACGT-PVIASNISSL-------PEVAGDAALYFDPLDPE----ALAAAIE 331 (365)
T ss_pred hHHHHHHhhhhhhcccchhccCCCCHHHHhcCCC-cEEecCCCCc-------cceecCceeeeCCCCHH----HHHHHHH
Confidence 4678889999999998644433455999999997 7787764321 11112345566655555 5556555
Q ss_pred c-C-CHHHHHHHHHHHhhhcceeEEe
Q 011220 433 S-Y-SQEEVKRMRDKVIDYIPKFIYA 456 (490)
Q Consensus 433 ~-I-s~~~i~~Mr~~l~~v~~~f~Y~ 456 (490)
. + .++...+|.++..++...+.|+
T Consensus 332 ~l~~~~~~~~~~~~~~~~~~~~~sw~ 357 (365)
T cd03809 332 RLLEDPALREELRERGLARAKRFSWE 357 (365)
T ss_pred HHhcCHHHHHHHHHHHHHHHHhCCHH
Confidence 5 3 4677778887776666666554
No 14
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=92.78 E-value=0.18 Score=49.35 Aligned_cols=93 Identities=12% Similarity=0.155 Sum_probs=60.9
Q ss_pred hhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccccCcccHHHHHh
Q 011220 353 SAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAVLE 432 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~l~~iL~ 432 (490)
.++.+.|..|.+.+.|.-.......++|||.+|| |||.++..... ..+ +.....+.++..+.. ++.+.|.
T Consensus 267 ~~~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g~-pvI~~~~~~~~---~~~--~~~~~g~~~~~~~~~----~l~~~i~ 336 (374)
T cd03801 267 EDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGL-PVVASDVGGIP---EVV--EDGETGLLVPPGDPE----ALAEAIL 336 (374)
T ss_pred hhHHHHHHhcCEEEecchhccccchHHHHHHcCC-cEEEeCCCChh---HHh--cCCcceEEeCCCCHH----HHHHHHH
Confidence 5788999999999999866555667999999997 67777642211 111 224566677766555 5666665
Q ss_pred cC--CHHHHHHHHHHHh-hhcceeEE
Q 011220 433 SY--SQEEVKRMRDKVI-DYIPKFIY 455 (490)
Q Consensus 433 ~I--s~~~i~~Mr~~l~-~v~~~f~Y 455 (490)
.+ .++...+|.++.. .+...+.|
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (374)
T cd03801 337 RLLDDPELRRRLGEAARERVAERFSW 362 (374)
T ss_pred HHHcChHHHHHHHHHHHHHHHHhcCH
Confidence 53 3566777777765 34444433
No 15
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=92.56 E-value=0.62 Score=48.50 Aligned_cols=95 Identities=12% Similarity=0.181 Sum_probs=59.7
Q ss_pred hhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccccCcccHHHHHh
Q 011220 353 SAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAVLE 432 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~l~~iL~ 432 (490)
.++.+.|+.+..++.|.=.......+.|||.+|| |||.++.... + ..+ +-....+.++..|+. ++.+.|.
T Consensus 294 ~~~~~~l~~ad~~v~ps~~E~~g~~~lEAma~G~-Pvi~~~~~~~-~--e~i--~~~~~g~~~~~~d~~----~la~~i~ 363 (405)
T TIGR03449 294 EELVHVYRAADVVAVPSYNESFGLVAMEAQACGT-PVVAARVGGL-P--VAV--ADGETGLLVDGHDPA----DWADALA 363 (405)
T ss_pred HHHHHHHHhCCEEEECCCCCCcChHHHHHHHcCC-CEEEecCCCc-H--hhh--ccCCceEECCCCCHH----HHHHHHH
Confidence 4678899999998888644334456999999996 8888874210 0 011 122345666665554 4443333
Q ss_pred cC--CHHHHHHHHHHHhhhcceeEEec
Q 011220 433 SY--SQEEVKRMRDKVIDYIPKFIYAK 457 (490)
Q Consensus 433 ~I--s~~~i~~Mr~~l~~v~~~f~Y~~ 457 (490)
.+ .++...+|.++..+...+|.|+.
T Consensus 364 ~~l~~~~~~~~~~~~~~~~~~~fsw~~ 390 (405)
T TIGR03449 364 RLLDDPRTRIRMGAAAVEHAAGFSWAA 390 (405)
T ss_pred HHHhCHHHHHHHHHHHHHHHHhCCHHH
Confidence 32 35677888888777666665554
No 16
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=92.51 E-value=0.21 Score=53.69 Aligned_cols=99 Identities=15% Similarity=0.249 Sum_probs=66.0
Q ss_pred hhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccccCcccHHHHHh
Q 011220 353 SAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAVLE 432 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~l~~iL~ 432 (490)
.++.+.|+.+..++.|.........++|||.+| +|||.++..... +..-......-.+.++..|.. ++.+.|.
T Consensus 323 ~ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~G-~PVI~s~~gg~~--eiv~~~~~~~~G~lv~~~d~~----~la~~i~ 395 (465)
T PLN02871 323 DELSQAYASGDVFVMPSESETLGFVVLEAMASG-VPVVAARAGGIP--DIIPPDQEGKTGFLYTPGDVD----DCVEKLE 395 (465)
T ss_pred HHHHHHHHHCCEEEECCcccccCcHHHHHHHcC-CCEEEcCCCCcH--hhhhcCCCCCceEEeCCCCHH----HHHHHHH
Confidence 478889999999999987666666799999999 899988743210 011000124567777766665 4444444
Q ss_pred cC--CHHHHHHHHHHHhhhcceeEEecC
Q 011220 433 SY--SQEEVKRMRDKVIDYIPKFIYAKS 458 (490)
Q Consensus 433 ~I--s~~~i~~Mr~~l~~v~~~f~Y~~p 458 (490)
.+ .++...+|.++..+....|-|..-
T Consensus 396 ~ll~~~~~~~~~~~~a~~~~~~fsw~~~ 423 (465)
T PLN02871 396 TLLADPELRERMGAAAREEVEKWDWRAA 423 (465)
T ss_pred HHHhCHHHHHHHHHHHHHHHHhCCHHHH
Confidence 43 467778888888776666665543
No 17
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=92.47 E-value=0.85 Score=46.67 Aligned_cols=93 Identities=11% Similarity=0.170 Sum_probs=58.7
Q ss_pred hhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccccCcccHHHHHh
Q 011220 353 SAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAVLE 432 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~l~~iL~ 432 (490)
.++.+.++.|..++.|.-.......++|||.+| +|||.++..... ++ + +-....+.++..+.. ++.+.+.
T Consensus 294 ~~~~~~~~~adi~l~ps~~e~~~~~l~Ea~a~G-~Pvi~s~~~~~~--e~-i--~~~~~g~~~~~~~~~----~l~~~i~ 363 (398)
T cd03800 294 EDLPALYRAADVFVNPALYEPFGLTALEAMACG-LPVVATAVGGPR--DI-V--VDGVTGLLVDPRDPE----ALAAALR 363 (398)
T ss_pred HHHHHHHHhCCEEEecccccccCcHHHHHHhcC-CCEEECCCCCHH--HH-c--cCCCCeEEeCCCCHH----HHHHHHH
Confidence 357788999999999976655556799999999 599998753211 01 1 122345666655544 4444443
Q ss_pred cC--CHHHHHHHHHHHhhhc-ceeEE
Q 011220 433 SY--SQEEVKRMRDKVIDYI-PKFIY 455 (490)
Q Consensus 433 ~I--s~~~i~~Mr~~l~~v~-~~f~Y 455 (490)
.+ .+++..+|.++..+.. .+|.|
T Consensus 364 ~l~~~~~~~~~~~~~a~~~~~~~~s~ 389 (398)
T cd03800 364 RLLTDPALRRRLSRAGLRRARARYTW 389 (398)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHhCCH
Confidence 32 3677788888765543 55544
No 18
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=91.82 E-value=0.83 Score=44.98 Aligned_cols=41 Identities=12% Similarity=0.107 Sum_probs=33.8
Q ss_pred hhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecC
Q 011220 353 SAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKR 394 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~ 394 (490)
.++.+.+.+|.+++.|.......-.++|||.+|| |||.++.
T Consensus 270 ~~~~~~~~~ad~~i~~~~~~~~~~~~~Ea~~~G~-pvI~~~~ 310 (377)
T cd03798 270 EEVPAYYAAADVFVLPSLREGFGLVLLEAMACGL-PVVATDV 310 (377)
T ss_pred HHHHHHHHhcCeeecchhhccCChHHHHHHhcCC-CEEEecC
Confidence 4678899999999999876666667999999999 6777764
No 19
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=91.77 E-value=0.22 Score=51.24 Aligned_cols=88 Identities=17% Similarity=0.350 Sum_probs=60.2
Q ss_pred hhHHHhhccCeEEeccCCCC-----------CCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccc
Q 011220 353 SAILETFLDSVFCLQPRGDS-----------FTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVR 421 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds-----------~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~ 421 (490)
.++.+.|+. .|+|++.+++ ...-.++++|.+| +|||.++..+... +. +-....+.++ ++.
T Consensus 218 eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G-~PVI~~~~~~~~~--~V---~~~~~G~~v~--~~~ 288 (333)
T PRK09814 218 EELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAG-LPVIVWSKAAIAD--FI---VENGLGFVVD--SLE 288 (333)
T ss_pred HHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCC-CCEEECCCccHHH--HH---HhCCceEEeC--CHH
Confidence 455666666 8999887761 1123488888888 5999998643211 00 2234555555 344
Q ss_pred cCcccHHHHHhcCCHHHHHHHHHHHhhhccee
Q 011220 422 NGTKSIKAVLESYSQEEVKRMRDKVIDYIPKF 453 (490)
Q Consensus 422 ~g~~~l~~iL~~Is~~~i~~Mr~~l~~v~~~f 453 (490)
++.+.|..++++++.+|+++..++.+.+
T Consensus 289 ----el~~~l~~~~~~~~~~m~~n~~~~~~~~ 316 (333)
T PRK09814 289 ----ELPEIIDNITEEEYQEMVENVKKISKLL 316 (333)
T ss_pred ----HHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 6889999999999999999998887765
No 20
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=89.41 E-value=0.63 Score=47.31 Aligned_cols=92 Identities=14% Similarity=0.149 Sum_probs=57.4
Q ss_pred hHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccccCcccHHHHHhc
Q 011220 354 AILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAVLES 433 (490)
Q Consensus 354 ~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~l~~iL~~ 433 (490)
++.+.|+.|..++.|.-.......+.|||.+| +|||.++..... ++- +...-...++..++. ++.+.+..
T Consensus 263 ~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g-~PvI~s~~~~~~----e~i-~~~~~G~~~~~~~~~----~l~~~i~~ 332 (371)
T cd04962 263 HVEELLSIADLFLLPSEKESFGLAALEAMACG-VPVVASNAGGIP----EVV-KHGETGFLVDVGDVE----AMAEYALS 332 (371)
T ss_pred cHHHHHHhcCEEEeCCCcCCCccHHHHHHHcC-CCEEEeCCCCch----hhh-cCCCceEEcCCCCHH----HHHHHHHH
Confidence 57888999999999975444456699999999 788888753110 010 112234455555554 44443433
Q ss_pred C--CHHHHHHHHHHHhhh-cceeEE
Q 011220 434 Y--SQEEVKRMRDKVIDY-IPKFIY 455 (490)
Q Consensus 434 I--s~~~i~~Mr~~l~~v-~~~f~Y 455 (490)
+ .+++..+|+++..+. ..+|-|
T Consensus 333 l~~~~~~~~~~~~~~~~~~~~~fs~ 357 (371)
T cd04962 333 LLEDDELWQEFSRAARNRAAERFDS 357 (371)
T ss_pred HHhCHHHHHHHHHHHHHHHHHhCCH
Confidence 2 467788888887665 445433
No 21
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=88.92 E-value=2.6 Score=44.85 Aligned_cols=138 Identities=17% Similarity=0.183 Sum_probs=69.9
Q ss_pred ceeeeecccccC-CchhHHHHHHhhhhcC--CCCeEEEecCCCcccCChhhHHHhhccCeEEeccCCCCCCchhHHHHHh
Q 011220 307 SSLYCFAGATRM-VKNDFRSMLLSHCKNE--SGSCRVVDCEGTRCMNGTSAILETFLDSVFCLQPRGDSFTRRSIFDCMV 383 (490)
Q Consensus 307 ~~L~~FaG~~~~-~~~~iR~~L~~~~~~~--~~~~~~~~c~~~~c~~~~~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~ 383 (490)
+.-+.++|..+. .....++.|.+..++. ++.+.++. .+ ...++.+.|+.|..++.|.=+..-.-.++|||.
T Consensus 273 ~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l~~~V~f~g----~v--~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa 346 (419)
T cd03806 273 KIKLVLIGSCRNEDDEKRVEDLKLLAKELGLEDKVEFVV----NA--PFEELLEELSTASIGLHTMWNEHFGIGVVEYMA 346 (419)
T ss_pred ceEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCeEEEec----CC--CHHHHHHHHHhCeEEEECCccCCcccHHHHHHH
Confidence 456677776443 2223334443333221 23444432 12 235788999999999988644444556999999
Q ss_pred hCceeEEeecCcccccccccCCCCCCceEEEE-eccccccCcccHHHHHhcCCHHHHHHHHHHHhhhcceeEEe
Q 011220 384 AGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFI-DRNEVRNGTKSIKAVLESYSQEEVKRMRDKVIDYIPKFIYA 456 (490)
Q Consensus 384 aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I-~e~dv~~g~~~l~~iL~~Is~~~i~~Mr~~l~~v~~~f~Y~ 456 (490)
+||+||.-..+-.. .+..-|..-..-.+.+ +.+++. ..|.++|+ .++++...|+++-.++..+|-++
T Consensus 347 ~G~pvIa~~~ggp~--~~iv~~~~~g~~G~l~~d~~~la---~ai~~ll~-~~~~~~~~~~~~~~~~~~~fs~~ 414 (419)
T cd03806 347 AGLIPLAHASGGPL--LDIVVPWDGGPTGFLASTAEEYA---EAIEKILS-LSEEERLRIRRAARSSVKRFSDE 414 (419)
T ss_pred cCCcEEEEcCCCCc--hheeeccCCCCceEEeCCHHHHH---HHHHHHHh-CCHHHHHHHHHHHHHHHHhhCHH
Confidence 99976654322100 0111121112222222 222332 12333333 35566666777766666666543
No 22
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=88.80 E-value=1.3 Score=44.53 Aligned_cols=93 Identities=14% Similarity=0.191 Sum_probs=57.9
Q ss_pred hhHHHhhccCeEEeccC-CCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccccCcccHHHHH
Q 011220 353 SAILETFLDSVFCLQPR-GDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAVL 431 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~-Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~l~~iL 431 (490)
.++.+.|+.|..++.|. -.......++|||.+|| |||.++...... .+ +.....+.++.+++. .+.+.|
T Consensus 255 ~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~-PvI~~~~~~~~e---~i--~~~~~g~~~~~~~~~----~l~~~i 324 (355)
T cd03819 255 SDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGR-PVIASDHGGARE---TV--RPGETGLLVPPGDAE----ALAQAL 324 (355)
T ss_pred ccHHHHHHhCCEEEecCCCCCCCchHHHHHHhcCC-CEEEcCCCCcHH---HH--hCCCceEEeCCCCHH----HHHHHH
Confidence 46788999999999986 22333346999999999 778877432110 01 222345566666665 555555
Q ss_pred h-c--CCHHHHHHHHHHHhhh-cceeEE
Q 011220 432 E-S--YSQEEVKRMRDKVIDY-IPKFIY 455 (490)
Q Consensus 432 ~-~--Is~~~i~~Mr~~l~~v-~~~f~Y 455 (490)
. . ..+++..+|+++..+. ..+|.|
T Consensus 325 ~~~~~~~~~~~~~~~~~a~~~~~~~f~~ 352 (355)
T cd03819 325 DQILSLLPEGRAKMFAKARMCVETLFSY 352 (355)
T ss_pred HHHHhhCHHHHHHHHHHHHHHHHHhhhh
Confidence 2 2 3577888888886553 344433
No 23
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=88.51 E-value=0.65 Score=46.66 Aligned_cols=40 Identities=10% Similarity=-0.020 Sum_probs=32.9
Q ss_pred hHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecC
Q 011220 354 AILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKR 394 (490)
Q Consensus 354 ~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~ 394 (490)
+..+.|+.+.+.+.|.........++|||.+|| |||.+|.
T Consensus 255 ~~~~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~-PvI~~~~ 294 (360)
T cd04951 255 DIAAYYNAADLFVLSSAWEGFGLVVAEAMACEL-PVVATDA 294 (360)
T ss_pred cHHHHHHhhceEEecccccCCChHHHHHHHcCC-CEEEecC
Confidence 567789999999998876555567999999999 8888875
No 24
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=88.04 E-value=1.1 Score=44.39 Aligned_cols=86 Identities=15% Similarity=0.232 Sum_probs=54.5
Q ss_pred hhHHHhhccCeEEeccCC-CCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccccCcccHHHHH
Q 011220 353 SAILETFLDSVFCLQPRG-DSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAVL 431 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~G-ds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~l~~iL 431 (490)
.++.+.++.|..++.|.- .......++|||.+| +|||.++...... .+ +.....+.++..|+. ++.+.+
T Consensus 254 ~~~~~~~~~ad~~i~ps~~~e~~~~~~~Ea~a~G-~Pvi~~~~~~~~e---~i--~~~~~g~~~~~~d~~----~l~~~i 323 (359)
T cd03823 254 EEIDDFYAEIDVLVVPSIWPENFPLVIREALAAG-VPVIASDIGGMAE---LV--RDGVNGLLFPPGDAE----DLAAAL 323 (359)
T ss_pred HHHHHHHHhCCEEEEcCcccCCCChHHHHHHHCC-CCEEECCCCCHHH---Hh--cCCCcEEEECCCCHH----HHHHHH
Confidence 578889999999999963 233445699999999 6788876432110 11 223356677766654 444444
Q ss_pred hcC--CHHHHHHHHHHHhh
Q 011220 432 ESY--SQEEVKRMRDKVID 448 (490)
Q Consensus 432 ~~I--s~~~i~~Mr~~l~~ 448 (490)
..+ .++...+|+++..+
T Consensus 324 ~~l~~~~~~~~~~~~~~~~ 342 (359)
T cd03823 324 ERLIDDPDLLERLRAGIEP 342 (359)
T ss_pred HHHHhChHHHHHHHHhHHH
Confidence 333 46677777777543
No 25
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=88.03 E-value=0.77 Score=47.19 Aligned_cols=92 Identities=12% Similarity=0.163 Sum_probs=57.7
Q ss_pred hhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCC--CCCceEEEEeccccccCcccHHHH
Q 011220 353 SAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPD--EPGSYSVFIDRNEVRNGTKSIKAV 430 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPf--dw~~fSV~I~e~dv~~g~~~l~~i 430 (490)
.+..+.|+.|.+++.|.-.......++|||.+|+ |||.+|... .+- +.......++.++.. ++.+.
T Consensus 264 ~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G~-Pvv~s~~~g-------~~e~i~~~~~g~~~~~~d~~----~la~~ 331 (374)
T TIGR03088 264 DDVPALMQALDLFVLPSLAEGISNTILEAMASGL-PVIATAVGG-------NPELVQHGVTGALVPPGDAV----ALARA 331 (374)
T ss_pred CCHHHHHHhcCEEEeccccccCchHHHHHHHcCC-CEEEcCCCC-------cHHHhcCCCceEEeCCCCHH----HHHHH
Confidence 3677889999999988655555567999999996 999987532 111 223456667766555 45555
Q ss_pred HhcC--CHHHHHHHHHHHhhh-cceeEEe
Q 011220 431 LESY--SQEEVKRMRDKVIDY-IPKFIYA 456 (490)
Q Consensus 431 L~~I--s~~~i~~Mr~~l~~v-~~~f~Y~ 456 (490)
|..+ .+++..+|.++..+. ..+|-|.
T Consensus 332 i~~l~~~~~~~~~~~~~a~~~~~~~fs~~ 360 (374)
T TIGR03088 332 LQPYVSDPAARRAHGAAGRARAEQQFSIN 360 (374)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHhCCHH
Confidence 5443 355566666655443 3455443
No 26
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=88.00 E-value=2.1 Score=44.75 Aligned_cols=94 Identities=12% Similarity=0.053 Sum_probs=55.4
Q ss_pred hhhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccccCcccHHHHH
Q 011220 352 TSAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAVL 431 (490)
Q Consensus 352 ~~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~l~~iL 431 (490)
..++.+.|+.|..++.|.-.......++|||.+|| |||.+|.... + -.+ +-..-.+.++..|.. .+.+.+
T Consensus 291 ~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~-PVIas~~~g~-~--e~i--~~~~~G~lv~~~d~~----~la~~i 360 (396)
T cd03818 291 YDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGC-LVVGSDTAPV-R--EVI--TDGENGLLVDFFDPD----ALAAAV 360 (396)
T ss_pred HHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCC-CEEEcCCCCc-h--hhc--ccCCceEEcCCCCHH----HHHHHH
Confidence 35788899999998887654444456999999999 7888874211 0 001 222345566655544 333333
Q ss_pred hcC--CHHHHHHHHHHHhhhc-ceeEE
Q 011220 432 ESY--SQEEVKRMRDKVIDYI-PKFIY 455 (490)
Q Consensus 432 ~~I--s~~~i~~Mr~~l~~v~-~~f~Y 455 (490)
..+ .+++..+|.++..+.. .+|.|
T Consensus 361 ~~ll~~~~~~~~l~~~ar~~~~~~fs~ 387 (396)
T cd03818 361 IELLDDPARRARLRRAARRTALRYDLL 387 (396)
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHhccH
Confidence 322 3566777877765433 33443
No 27
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=87.97 E-value=0.68 Score=45.91 Aligned_cols=91 Identities=12% Similarity=0.202 Sum_probs=54.6
Q ss_pred hhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccccCcccHHHHHh
Q 011220 353 SAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAVLE 432 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~l~~iL~ 432 (490)
.++.+.|..+.+++.|.-.......++|||.+|| |||.++...... .+. + ...+.++.++ . ++.+.+.
T Consensus 273 ~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~-PvI~~~~~~~~~---~~~-~--~~~~~~~~~~-~----~~~~~i~ 340 (375)
T cd03821 273 EDKAAALADADLFVLPSHSENFGIVVAEALACGT-PVVTTDKVPWQE---LIE-Y--GCGWVVDDDV-D----ALAAALR 340 (375)
T ss_pred HHHHHHHhhCCEEEeccccCCCCcHHHHHHhcCC-CEEEcCCCCHHH---Hhh-c--CceEEeCCCh-H----HHHHHHH
Confidence 3677889999999999865555566999999996 888887532111 111 2 3344444332 2 3333333
Q ss_pred cC--CHHHHHHHHHHHhhh-cceeEE
Q 011220 433 SY--SQEEVKRMRDKVIDY-IPKFIY 455 (490)
Q Consensus 433 ~I--s~~~i~~Mr~~l~~v-~~~f~Y 455 (490)
.+ .+++..+|.++..+. ..++.|
T Consensus 341 ~l~~~~~~~~~~~~~~~~~~~~~~s~ 366 (375)
T cd03821 341 RALELPQRLKAMGENGRALVEERFSW 366 (375)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHhcCH
Confidence 32 236777777776654 455544
No 28
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=86.74 E-value=1.3 Score=45.50 Aligned_cols=98 Identities=12% Similarity=0.153 Sum_probs=57.8
Q ss_pred hhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEecccccc-Cc-ccHHHH
Q 011220 353 SAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRN-GT-KSIKAV 430 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~-g~-~~l~~i 430 (490)
.+..+.|..|..++.|.-.......++|||.+|| |||.+|... .. + .+ +-....+.++..+... +. ..+.+.
T Consensus 272 ~~~~~~~~~aDv~v~ps~~e~~g~~~lEA~a~G~-PvI~s~~~~-~~-e-~i--~~~~~G~~~~~~~~~~~~~~~~l~~~ 345 (388)
T TIGR02149 272 EELVELLSNAEVFVCPSIYEPLGIVNLEAMACGT-PVVASATGG-IP-E-VV--VDGETGFLVPPDNSDADGFQAELAKA 345 (388)
T ss_pred HHHHHHHHhCCEEEeCCccCCCChHHHHHHHcCC-CEEEeCCCC-HH-H-Hh--hCCCceEEcCCCCCcccchHHHHHHH
Confidence 5678889999999998755544556899999999 898887431 00 0 01 1123355555544400 00 034444
Q ss_pred HhcC--CHHHHHHHHHHHhh-hcceeEEe
Q 011220 431 LESY--SQEEVKRMRDKVID-YIPKFIYA 456 (490)
Q Consensus 431 L~~I--s~~~i~~Mr~~l~~-v~~~f~Y~ 456 (490)
|..+ .+++..+|.++..+ +..+|.|+
T Consensus 346 i~~l~~~~~~~~~~~~~a~~~~~~~~s~~ 374 (388)
T TIGR02149 346 INILLADPELAKKMGIAGRKRAEEEFSWG 374 (388)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHhCCHH
Confidence 4432 46677788777654 33455543
No 29
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=86.58 E-value=4.5 Score=43.53 Aligned_cols=95 Identities=11% Similarity=0.181 Sum_probs=54.7
Q ss_pred hhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCC---CceEEEEeccccccCcccHHH
Q 011220 353 SAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEP---GSYSVFIDRNEVRNGTKSIKA 429 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw---~~fSV~I~e~dv~~g~~~l~~ 429 (490)
....+.++.+.+++.|.-..+..-...|||.+||.||. ++...... ..-..++ ..-.+.++..+.. ++.+
T Consensus 357 ~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~-s~~gg~~e--~v~~~~~~~~~~~G~l~~~~d~~----~la~ 429 (473)
T TIGR02095 357 ALAHLIYAGADFILMPSRFEPCGLTQLYAMRYGTVPIV-RRTGGLAD--TVVDGDPEAESGTGFLFEEYDPG----ALLA 429 (473)
T ss_pred HHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCCCCeEE-ccCCCccc--eEecCCCCCCCCceEEeCCCCHH----HHHH
Confidence 34567899999999998777776778999999997654 44211000 0111111 1345566655544 3444
Q ss_pred HHhcC------CHHHHHHHHHHHhhhcceeEEe
Q 011220 430 VLESY------SQEEVKRMRDKVIDYIPKFIYA 456 (490)
Q Consensus 430 iL~~I------s~~~i~~Mr~~l~~v~~~f~Y~ 456 (490)
.|..+ .++...+|.++.. ...|-|.
T Consensus 430 ~i~~~l~~~~~~~~~~~~~~~~~~--~~~fsw~ 460 (473)
T TIGR02095 430 ALSRALRLYRQDPSLWEALQKNAM--SQDFSWD 460 (473)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHh--ccCCCcH
Confidence 33322 3566777776643 2445443
No 30
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=86.24 E-value=2.1 Score=45.43 Aligned_cols=90 Identities=16% Similarity=0.299 Sum_probs=59.3
Q ss_pred hhHHHhhccCeEEeccCC-------CCCCchhHHHHHhhCceeEEeecCcccccccccCCC--CCCceEEEEeccccccC
Q 011220 353 SAILETFLDSVFCLQPRG-------DSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPD--EPGSYSVFIDRNEVRNG 423 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~G-------ds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPf--dw~~fSV~I~e~dv~~g 423 (490)
.+..+.|+.+..++.|.= ++.. ..+.|||.+|+ |||.++... .|- +-..-.+.++..|..
T Consensus 290 ~el~~~l~~aDv~v~pS~~~~~g~~Eg~p-~~llEAma~G~-PVI~t~~~g-------~~E~v~~~~~G~lv~~~d~~-- 358 (406)
T PRK15427 290 HEVKAMLDDADVFLLPSVTGADGDMEGIP-VALMEAMAVGI-PVVSTLHSG-------IPELVEADKSGWLVPENDAQ-- 358 (406)
T ss_pred HHHHHHHHhCCEEEECCccCCCCCccCcc-HHHHHHHhCCC-CEEEeCCCC-------chhhhcCCCceEEeCCCCHH--
Confidence 477889999999998852 3333 45999999995 999987532 221 223456677776665
Q ss_pred cccHHHHHhcC---CHHHHHHHHHHHhh-hcceeEE
Q 011220 424 TKSIKAVLESY---SQEEVKRMRDKVID-YIPKFIY 455 (490)
Q Consensus 424 ~~~l~~iL~~I---s~~~i~~Mr~~l~~-v~~~f~Y 455 (490)
++.+.|..+ .+++..+|.++..+ +..+|-|
T Consensus 359 --~la~ai~~l~~~d~~~~~~~~~~ar~~v~~~f~~ 392 (406)
T PRK15427 359 --ALAQRLAAFSQLDTDELAPVVKRAREKVETDFNQ 392 (406)
T ss_pred --HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCH
Confidence 555555544 56778888887654 3444533
No 31
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=86.06 E-value=4.5 Score=42.30 Aligned_cols=42 Identities=14% Similarity=0.138 Sum_probs=33.2
Q ss_pred hhhHHHhhccCeEEeccCCC-CCCchhHHHHHhhCceeEEeecC
Q 011220 352 TSAILETFLDSVFCLQPRGD-SFTRRSIFDCMVAGSIPVFFWKR 394 (490)
Q Consensus 352 ~~~y~~~m~~S~FCL~P~Gd-s~ssrrl~DAi~aGCIPViisd~ 394 (490)
..+..+.|+.|..++.|..+ ......++|||.+| +|||.++.
T Consensus 267 ~~~l~~~~~~aDv~v~pS~~~E~f~~~~lEAma~G-~PVI~s~~ 309 (380)
T PRK15484 267 PEKMHNYYPLADLVVVPSQVEEAFCMVAVEAMAAG-KPVLASTK 309 (380)
T ss_pred HHHHHHHHHhCCEEEeCCCCccccccHHHHHHHcC-CCEEEeCC
Confidence 35788899999999999753 33334689999999 78999875
No 32
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=85.78 E-value=1.8 Score=43.88 Aligned_cols=94 Identities=16% Similarity=0.186 Sum_probs=57.1
Q ss_pred hhHHHhhccCeEEeccCCC------CCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccccCccc
Q 011220 353 SAILETFLDSVFCLQPRGD------SFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKS 426 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gd------s~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~ 426 (490)
.++.+.|+.|...+.|.-. ......++|||.+|| |||.+|...... + + .-....+.++..++. +
T Consensus 256 ~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~-PvI~s~~~~~~e--~-i--~~~~~g~~~~~~d~~----~ 325 (367)
T cd05844 256 AEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGV-PVVATRHGGIPE--A-V--EDGETGLLVPEGDVA----A 325 (367)
T ss_pred HHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCC-CEEEeCCCCchh--h-e--ecCCeeEEECCCCHH----H
Confidence 4677889999998887532 112345999999996 999988632110 0 1 223456677766655 4
Q ss_pred HHHHHhcC--CHHHHHHHHHHHhh-hcceeEEe
Q 011220 427 IKAVLESY--SQEEVKRMRDKVID-YIPKFIYA 456 (490)
Q Consensus 427 l~~iL~~I--s~~~i~~Mr~~l~~-v~~~f~Y~ 456 (490)
+.+.|..+ .++...+|.++..+ +..+|.|.
T Consensus 326 l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~ 358 (367)
T cd05844 326 LAAALGRLLADPDLRARMGAAGRRRVEERFDLR 358 (367)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHHCCHH
Confidence 54544433 35567777776544 33455443
No 33
>PRK00654 glgA glycogen synthase; Provisional
Probab=83.90 E-value=7.2 Score=42.09 Aligned_cols=94 Identities=9% Similarity=0.107 Sum_probs=54.5
Q ss_pred hHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCC---CceEEEEeccccccCcccHHHH
Q 011220 354 AILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEP---GSYSVFIDRNEVRNGTKSIKAV 430 (490)
Q Consensus 354 ~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw---~~fSV~I~e~dv~~g~~~l~~i 430 (490)
.....++.|.+++.|.=..+..-...|||.+||+||+-.-+-. . +...+.++ +.-.+.++..+.. .+.+.
T Consensus 349 ~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~-~--e~v~~~~~~~~~~~G~lv~~~d~~----~la~~ 421 (466)
T PRK00654 349 LAHRIYAGADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGL-A--DTVIDYNPEDGEATGFVFDDFNAE----DLLRA 421 (466)
T ss_pred HHHHHHhhCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCc-c--ceeecCCCCCCCCceEEeCCCCHH----HHHHH
Confidence 3457889999999998777666779999999998877432210 0 01111111 1345666665554 44444
Q ss_pred HhcC-----CHHHHHHHHHHHhhhcceeEEe
Q 011220 431 LESY-----SQEEVKRMRDKVIDYIPKFIYA 456 (490)
Q Consensus 431 L~~I-----s~~~i~~Mr~~l~~v~~~f~Y~ 456 (490)
|..+ .++...+|.++.. ..+|.|.
T Consensus 422 i~~~l~~~~~~~~~~~~~~~~~--~~~fsw~ 450 (466)
T PRK00654 422 LRRALELYRQPPLWRALQRQAM--AQDFSWD 450 (466)
T ss_pred HHHHHHHhcCHHHHHHHHHHHh--ccCCChH
Confidence 4332 3455667766643 2444443
No 34
>PRK14098 glycogen synthase; Provisional
Probab=83.72 E-value=6 Score=43.27 Aligned_cols=41 Identities=17% Similarity=0.047 Sum_probs=34.0
Q ss_pred hhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeec
Q 011220 353 SAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWK 393 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd 393 (490)
....+.++.|.+++.|.=..+..-...|||.+||+||+...
T Consensus 373 ~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~ 413 (489)
T PRK14098 373 AFFHLAIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAG 413 (489)
T ss_pred HHHHHHHHhCCEEEeCCCCCCchHHHHHHHhCCCCeEEecC
Confidence 35678899999999998776666678999999999998654
No 35
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=83.60 E-value=1.6 Score=44.71 Aligned_cols=94 Identities=10% Similarity=0.225 Sum_probs=57.0
Q ss_pred hhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccccCcccHHHHHh
Q 011220 353 SAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAVLE 432 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~l~~iL~ 432 (490)
.+..+.|+.+..++.|.-.....-.+.|||.+|| |||..+-. +-+-++. .-.+-.+.++..+.. ++.+.|.
T Consensus 270 ~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~-PvI~~~~~-~g~~~~v---~~~~~G~lv~~~d~~----~la~~i~ 340 (372)
T cd04949 270 RDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGL-PVISYDVN-YGPSEII---EDGENGYLVPKGDIE----ALAEAII 340 (372)
T ss_pred CCHHHHHhhhhEEEecccccccChHHHHHHhCCC-CEEEecCC-CCcHHHc---ccCCCceEeCCCcHH----HHHHHHH
Confidence 3567889999999998744333456999999999 77877631 1000111 223455666655544 3444443
Q ss_pred cC--CHHHHHHHHHHHhhhcceeEE
Q 011220 433 SY--SQEEVKRMRDKVIDYIPKFIY 455 (490)
Q Consensus 433 ~I--s~~~i~~Mr~~l~~v~~~f~Y 455 (490)
.+ .++.+.+|+++..+...+|.|
T Consensus 341 ~ll~~~~~~~~~~~~a~~~~~~~s~ 365 (372)
T cd04949 341 ELLNDPKLLQKFSEAAYENAERYSE 365 (372)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHhhH
Confidence 32 356788888887665555443
No 36
>KOG2619 consensus Fucosyltransferase [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=83.29 E-value=4.7 Score=42.62 Aligned_cols=157 Identities=17% Similarity=0.217 Sum_probs=84.5
Q ss_pred CCCCCceeeccCCCccCCC-CCCCccccccccCCCCCceeeeecccccCCchhHHHHHHhhhhcCCCCeEEE-ecCCCcc
Q 011220 271 NPWDYFDVGVPYPTGFHPR-SASDVTQWQDYVRSRNRSSLYCFAGATRMVKNDFRSMLLSHCKNESGSCRVV-DCEGTRC 348 (490)
Q Consensus 271 ~~w~~~Dv~iPy~t~fhP~-~~~~~~~w~~~~~~~~R~~L~~FaG~~~~~~~~iR~~L~~~~~~~~~~~~~~-~c~~~~c 348 (490)
+++.+-|+.+||-...++. ....+ .+++ .-..+++.++.+.-+... ..-|..+++++...- .+.++ .|....+
T Consensus 162 Tyr~dSd~~~pygy~~~~~~~~~~~-p~~~-~~~~k~~~~aw~vSnc~~--~~~R~~~~~~L~k~l-~iD~YG~c~~~~~ 236 (372)
T KOG2619|consen 162 TYRRDSDLFVPYGYLEKPEANPVLV-PVNS-ILSAKTKLAAWLVSNCIP--RSARLDYYKELMKHL-EIDSYGECLRKNA 236 (372)
T ss_pred EEeccCCCCCccceEeecccCceec-cccc-ccccccceeeeeccccCc--chHHHHHHHHHHhhC-ceeeccccccccc
Confidence 4555668888873222222 12111 2231 124456666666654433 456666666654331 12232 2322111
Q ss_pred c-CChhhHHHhhccCeEEeccC---CCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccccCc
Q 011220 349 M-NGTSAILETFLDSVFCLQPR---GDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGT 424 (490)
Q Consensus 349 ~-~~~~~y~~~m~~S~FCL~P~---Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~ 424 (490)
. .+.....+.+.+-||=|.-. -...-+..|+-|+.+|.|||+++..+ | +-.+| + +- +|..+|..+-.
T Consensus 237 ~~~~~~~~~~~~s~YKFyLAfENS~c~DYVTEKfw~al~~gsVPVvlg~~n-~---e~fvP-~--~S--fI~vdDF~s~~ 307 (372)
T KOG2619|consen 237 NRDPSDCLLETLSHYKFYLAFENSNCEDYVTEKFWNALDAGSVPVVLGPPN-Y---ENFVP-P--DS--FIHVDDFQSPQ 307 (372)
T ss_pred cCCCCCcceeecccceEEEEecccCCcccccHHHHhhhhcCcccEEECCcc-c---cccCC-C--cc--eEehhhcCCHH
Confidence 1 11235678888999999542 23444566999999999999999842 2 23466 3 12 45555554222
Q ss_pred ccHHHHHhcCCHHHHHHH
Q 011220 425 KSIKAVLESYSQEEVKRM 442 (490)
Q Consensus 425 ~~l~~iL~~Is~~~i~~M 442 (490)
++...|+.+..++.+-|
T Consensus 308 -ela~ylk~L~~n~~~Y~ 324 (372)
T KOG2619|consen 308 -ELAAYLKKLDKNPAAYL 324 (372)
T ss_pred -HHHHHHHHhhcCHHHHH
Confidence 67777777755444433
No 37
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=82.42 E-value=1.3 Score=45.05 Aligned_cols=40 Identities=18% Similarity=0.375 Sum_probs=32.0
Q ss_pred hhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecC
Q 011220 353 SAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKR 394 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~ 394 (490)
.++.+.|+.+..++.|.-.+.+ -.++|||.+|| |||.++.
T Consensus 253 ~~~~~~~~~ad~~v~ps~e~~g-~~~~Eama~G~-Pvi~~~~ 292 (351)
T cd03804 253 EELRDLYARARAFLFPAEEDFG-IVPVEAMASGT-PVIAYGK 292 (351)
T ss_pred HHHHHHHHhCCEEEECCcCCCC-chHHHHHHcCC-CEEEeCC
Confidence 4688899999999988654444 34799999998 9998875
No 38
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=82.14 E-value=2.5 Score=47.16 Aligned_cols=133 Identities=14% Similarity=0.131 Sum_probs=75.7
Q ss_pred CCCeEEEecCCCcccCC---hhhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCC---CC
Q 011220 335 SGSCRVVDCEGTRCMNG---TSAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPD---EP 408 (490)
Q Consensus 335 ~~~~~~~~c~~~~c~~~---~~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPf---dw 408 (490)
.++++++....-..+++ ...|.+.++.+..++.|.-+.+...-..|||.+| +|||.++..-... | .+- +-
T Consensus 445 ~drVkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G-~PvI~t~~~gf~~--~-v~E~v~~~ 520 (590)
T cd03793 445 EDRVKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMG-IPSITTNLSGFGC--F-MEEHIEDP 520 (590)
T ss_pred CCeEEEEEcccccCCCCCcCCcchHHHhhhceEEEeccccCCCCcHHHHHHHcC-CCEEEccCcchhh--h-hHHHhccC
Confidence 56777765432222222 2478999999999999986666666689999999 5999998632100 1 121 22
Q ss_pred CceEEEEeccc---cccCcccHHHHHhc---CCHHHHHHHHHHHhhhcceeEEecCCCCCCchhhHHHHHHH
Q 011220 409 GSYSVFIDRNE---VRNGTKSIKAVLES---YSQEEVKRMRDKVIDYIPKFIYAKSREGLGTIKDAFDVAID 474 (490)
Q Consensus 409 ~~fSV~I~e~d---v~~g~~~l~~iL~~---Is~~~i~~Mr~~l~~v~~~f~Y~~p~~~~~~~~DAfd~~l~ 474 (490)
.+..|.|...+ +......|.+.|.. -+..+....|..-.++...|.|..-.. -...|.+.+++
T Consensus 521 ~~~gi~V~~r~~~~~~e~v~~La~~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~---~Y~~A~~~Al~ 589 (590)
T cd03793 521 ESYGIYIVDRRFKSPDESVQQLTQYMYEFCQLSRRQRIIQRNRTERLSDLLDWRNLGR---YYRKARQLALS 589 (590)
T ss_pred CCceEEEecCCccchHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHhCCHHHHHH---HHHHHHHHHhh
Confidence 35678886321 11000133333333 233343444433347778888876432 23567777664
No 39
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=82.01 E-value=3.7 Score=40.81 Aligned_cols=41 Identities=20% Similarity=0.186 Sum_probs=32.3
Q ss_pred hhHHHhhccCeEEeccCCC-CCCchhHHHHHhhCceeEEeecC
Q 011220 353 SAILETFLDSVFCLQPRGD-SFTRRSIFDCMVAGSIPVFFWKR 394 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gd-s~ssrrl~DAi~aGCIPViisd~ 394 (490)
.+..+.|+.+.+++.|.-. ......++|||.+|+ |||.+|.
T Consensus 235 ~~~~~~~~~~d~~v~ps~~~E~~~~~~lEAma~G~-PvI~~~~ 276 (335)
T cd03802 235 AEKAELLGNARALLFPILWEEPFGLVMIEAMACGT-PVIAFRR 276 (335)
T ss_pred HHHHHHHHhCcEEEeCCcccCCcchHHHHHHhcCC-CEEEeCC
Confidence 3567889999999999742 333356999999997 9999885
No 40
>PLN02949 transferase, transferring glycosyl groups
Probab=81.03 E-value=5.3 Score=43.47 Aligned_cols=40 Identities=20% Similarity=0.248 Sum_probs=30.0
Q ss_pred hhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEee
Q 011220 353 SAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFW 392 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViis 392 (490)
.+..+.+++|.+++.|.-+...--.+.|||.+||+||.-.
T Consensus 346 ~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~ 385 (463)
T PLN02949 346 RDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHN 385 (463)
T ss_pred HHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCcEEEeC
Confidence 4677889999999877643433345999999998776654
No 41
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=79.17 E-value=4.1 Score=40.93 Aligned_cols=41 Identities=20% Similarity=0.233 Sum_probs=30.4
Q ss_pred hhHHHhhccCeEEeccCCC-CCCchhHHHHHhhCceeEEeecC
Q 011220 353 SAILETFLDSVFCLQPRGD-SFTRRSIFDCMVAGSIPVFFWKR 394 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gd-s~ssrrl~DAi~aGCIPViisd~ 394 (490)
.+..+.+..+..++.|.-. ......++|||.+|| |||.++.
T Consensus 259 ~~~~~~~~~ad~~v~ps~~~e~~~~~~~EAma~G~-PvI~s~~ 300 (363)
T cd04955 259 QELLELLRYAALFYLHGHSVGGTNPSLLEAMAYGC-PVLASDN 300 (363)
T ss_pred HHHHHHHHhCCEEEeCCccCCCCChHHHHHHHcCC-CEEEecC
Confidence 4567788888888877644 334456999999999 7777764
No 42
>PRK14099 glycogen synthase; Provisional
Probab=77.31 E-value=14 Score=40.32 Aligned_cols=91 Identities=13% Similarity=0.164 Sum_probs=55.7
Q ss_pred hhHHHhh-ccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCC---CCC--------ceEEEEecccc
Q 011220 353 SAILETF-LDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPD---EPG--------SYSVFIDRNEV 420 (490)
Q Consensus 353 ~~y~~~m-~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPf---dw~--------~fSV~I~e~dv 420 (490)
.+....+ +.|.+.+.|.=..+..-...|||.+||+||+-.-+- ++- +.. .-.+.++..+.
T Consensus 360 ~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~GG--------l~d~V~~~~~~~~~~~~~~G~l~~~~d~ 431 (485)
T PRK14099 360 EALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGG--------LADTVVDANEMAIATGVATGVQFSPVTA 431 (485)
T ss_pred HHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEEeCCCC--------ccceeecccccccccCCCceEEeCCCCH
Confidence 3555665 568888888777776677899999999998843221 111 221 24566666555
Q ss_pred ccCcccHHHHHhc----C-CHHHHHHHHHHHhhhcceeEEec
Q 011220 421 RNGTKSIKAVLES----Y-SQEEVKRMRDKVIDYIPKFIYAK 457 (490)
Q Consensus 421 ~~g~~~l~~iL~~----I-s~~~i~~Mr~~l~~v~~~f~Y~~ 457 (490)
. .+.+.|.. + .++...+|+++.. ...|.|..
T Consensus 432 ~----~La~ai~~a~~l~~d~~~~~~l~~~~~--~~~fSw~~ 467 (485)
T PRK14099 432 D----ALAAALRKTAALFADPVAWRRLQRNGM--TTDVSWRN 467 (485)
T ss_pred H----HHHHHHHHHHHHhcCHHHHHHHHHHhh--hhcCChHH
Confidence 4 44444432 2 3567778887753 35565544
No 43
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=77.26 E-value=3.2 Score=33.91 Aligned_cols=80 Identities=16% Similarity=0.219 Sum_probs=42.7
Q ss_pred EeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEe-ccccccCcccHHHHHhcCCHHHHHHHH
Q 011220 365 CLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFID-RNEVRNGTKSIKAVLESYSQEEVKRMR 443 (490)
Q Consensus 365 CL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~-e~dv~~g~~~l~~iL~~Is~~~i~~Mr 443 (490)
||-|.-.+-...|+||+|.+|++.| ..+...+.. + |++.+-.+.++ .+++. +..+.|.+ .++++++|.
T Consensus 2 ~Ln~~~~~~~~~r~~E~~a~G~~vi-~~~~~~~~~----~-~~~~~~~~~~~~~~el~----~~i~~ll~-~~~~~~~ia 70 (92)
T PF13524_consen 2 NLNPSRSDGPNMRIFEAMACGTPVI-SDDSPGLRE----I-FEDGEHIITYNDPEELA----EKIEYLLE-NPEERRRIA 70 (92)
T ss_pred EeeCCCCCCCchHHHHHHHCCCeEE-ECChHHHHH----H-cCCCCeEEEECCHHHHH----HHHHHHHC-CHHHHHHHH
Confidence 3444322334457999999999743 333222211 1 45554455554 34554 33333333 678888888
Q ss_pred HHHhhh-cceeEE
Q 011220 444 DKVIDY-IPKFIY 455 (490)
Q Consensus 444 ~~l~~v-~~~f~Y 455 (490)
++..+. ..++.|
T Consensus 71 ~~a~~~v~~~~t~ 83 (92)
T PF13524_consen 71 KNARERVLKRHTW 83 (92)
T ss_pred HHHHHHHHHhCCH
Confidence 887543 334433
No 44
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=77.25 E-value=4.1 Score=42.64 Aligned_cols=91 Identities=8% Similarity=0.164 Sum_probs=53.7
Q ss_pred hHHHhhccCeEEeccC--CCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccccCcccHHHHH
Q 011220 354 AILETFLDSVFCLQPR--GDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAVL 431 (490)
Q Consensus 354 ~y~~~m~~S~FCL~P~--Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~l~~iL 431 (490)
+..+.++.+..++.|. |.+.. ..+.|||.+|| |||.++... ..+.-+ ..-.+.++ .+.. ++.+.+
T Consensus 290 ~~~~~~~~adv~v~Ps~~~eG~~-~~~lEAma~G~-PVV~t~~~~-----~~i~~~-~~~g~lv~-~~~~----~la~ai 356 (397)
T TIGR03087 290 DVRPYLAHAAVAVAPLRIARGIQ-NKVLEAMAMAK-PVVASPEAA-----EGIDAL-PGAELLVA-ADPA----DFAAAI 356 (397)
T ss_pred CHHHHHHhCCEEEecccccCCcc-cHHHHHHHcCC-CEEecCccc-----cccccc-CCcceEeC-CCHH----HHHHHH
Confidence 4667789999999885 44543 35999999998 999987421 012111 12344555 3333 333333
Q ss_pred hcC--CHHHHHHHHHHHhhh-cceeEEec
Q 011220 432 ESY--SQEEVKRMRDKVIDY-IPKFIYAK 457 (490)
Q Consensus 432 ~~I--s~~~i~~Mr~~l~~v-~~~f~Y~~ 457 (490)
..+ .++...+|.++..+. ..+|-|+.
T Consensus 357 ~~ll~~~~~~~~~~~~ar~~v~~~fsw~~ 385 (397)
T TIGR03087 357 LALLANPAEREELGQAARRRVLQHYHWPR 385 (397)
T ss_pred HHHHcCHHHHHHHHHHHHHHHHHhCCHHH
Confidence 322 356677888776553 45665543
No 45
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=75.92 E-value=18 Score=38.62 Aligned_cols=39 Identities=15% Similarity=0.112 Sum_probs=32.2
Q ss_pred hHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEee
Q 011220 354 AILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFW 392 (490)
Q Consensus 354 ~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViis 392 (490)
...+.++.+.+.+.|.-..+......|||.+||.||.-.
T Consensus 363 ~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~ 401 (476)
T cd03791 363 LAHLIYAGADFFLMPSRFEPCGLTQMYAMRYGTVPIVRA 401 (476)
T ss_pred HHHHHHHhCCEEECCCCCCCCcHHHHHHhhCCCCCEECc
Confidence 456788999999999877777777999999999987543
No 46
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=75.23 E-value=5 Score=41.26 Aligned_cols=41 Identities=17% Similarity=0.070 Sum_probs=32.0
Q ss_pred hhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecC
Q 011220 353 SAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKR 394 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~ 394 (490)
....+.++.|.+++.|.......-.+.|||.+| +|||.+|.
T Consensus 291 ~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G-~PvI~s~~ 331 (392)
T cd03805 291 SQKELLLSSARALLYTPSNEHFGIVPLEAMYAG-KPVIACNS 331 (392)
T ss_pred HHHHHHHhhCeEEEECCCcCCCCchHHHHHHcC-CCEEEECC
Confidence 456788999999998876655455689999999 67777764
No 47
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=74.81 E-value=8.5 Score=38.44 Aligned_cols=93 Identities=11% Similarity=0.173 Sum_probs=56.5
Q ss_pred hhHHHhhccCeEEeccC---CCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccccCcccHHH
Q 011220 353 SAILETFLDSVFCLQPR---GDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKA 429 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~---Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~l~~ 429 (490)
.++.+.++.+..++.|. +.+.+ -.+.|||.+| +|||.++...... . + -+.......++.++.. ++.+
T Consensus 255 ~~~~~~~~~ad~~i~ps~~~~e~~g-~~~~Ea~~~g-~Pvi~~~~~~~~~--~-i-~~~~~~g~~~~~~d~~----~~~~ 324 (357)
T cd03795 255 EEKAALLAACDVFVFPSVERSEAFG-IVLLEAMAFG-KPVISTEIGTGGS--Y-V-NLHGVTGLVVPPGDPA----ALAE 324 (357)
T ss_pred HHHHHHHHhCCEEEeCCcccccccc-hHHHHHHHcC-CCEEecCCCCchh--H-H-hhCCCceEEeCCCCHH----HHHH
Confidence 46788899999999885 33444 3599999997 4677776432111 0 0 0124556666665554 4444
Q ss_pred HHhcC--CHHHHHHHHHHHhhhc-ceeEE
Q 011220 430 VLESY--SQEEVKRMRDKVIDYI-PKFIY 455 (490)
Q Consensus 430 iL~~I--s~~~i~~Mr~~l~~v~-~~f~Y 455 (490)
.+..+ .+++..+|+++..+.. ++|.+
T Consensus 325 ~i~~l~~~~~~~~~~~~~~~~~~~~~~s~ 353 (357)
T cd03795 325 AIRRLLEDPELRERLGEAARERAEEEFTA 353 (357)
T ss_pred HHHHHHHCHHHHHHHHHHHHHHHHHhcch
Confidence 44433 4678888988876643 44433
No 48
>PHA01630 putative group 1 glycosyl transferase
Probab=73.72 E-value=5.9 Score=41.05 Aligned_cols=41 Identities=12% Similarity=0.179 Sum_probs=31.0
Q ss_pred hhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecC
Q 011220 353 SAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKR 394 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~ 394 (490)
.+..+.++.+..++.|.-.....--+.|||.+|| |||.+|.
T Consensus 201 ~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~-PVIas~~ 241 (331)
T PHA01630 201 DDIYSLFAGCDILFYPVRGGAFEIPVIEALALGL-DVVVTEK 241 (331)
T ss_pred HHHHHHHHhCCEEEECCccccCChHHHHHHHcCC-CEEEeCC
Confidence 5678889999999998644433455999999998 5666654
No 49
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=73.26 E-value=11 Score=37.23 Aligned_cols=90 Identities=12% Similarity=0.211 Sum_probs=53.4
Q ss_pred hhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccc--cccCcccHHHH
Q 011220 353 SAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNE--VRNGTKSIKAV 430 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~d--v~~g~~~l~~i 430 (490)
.++.+.|+.|.+.+.|.........++|||.+|+ |||.++...... . .+-..-.+.++.++ +. ..|.++
T Consensus 270 ~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g~-PvI~~~~~~~~~---~--i~~~~~g~~~~~~~~~~~---~~i~~l 340 (374)
T cd03817 270 EELPDYYKAADLFVFASTTETQGLVLLEAMAAGL-PVVAVDAPGLPD---L--VADGENGFLFPPGDEALA---EALLRL 340 (374)
T ss_pred HHHHHHHHHcCEEEecccccCcChHHHHHHHcCC-cEEEeCCCChhh---h--eecCceeEEeCCCCHHHH---HHHHHH
Confidence 4678899999999999866555567999999986 556665432110 0 12223455555443 22 023333
Q ss_pred HhcCCHHHHHHHHHHHhhhccee
Q 011220 431 LESYSQEEVKRMRDKVIDYIPKF 453 (490)
Q Consensus 431 L~~Is~~~i~~Mr~~l~~v~~~f 453 (490)
+. .++...+|+++..+...++
T Consensus 341 ~~--~~~~~~~~~~~~~~~~~~~ 361 (374)
T cd03817 341 LQ--DPELRRRLSKNAEESAEKF 361 (374)
T ss_pred Hh--ChHHHHHHHHHHHHHHHHH
Confidence 33 2455577887776655543
No 50
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=72.43 E-value=6.8 Score=40.38 Aligned_cols=94 Identities=16% Similarity=0.121 Sum_probs=55.7
Q ss_pred hhhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEec-cccccCcccHHHH
Q 011220 352 TSAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDR-NEVRNGTKSIKAV 430 (490)
Q Consensus 352 ~~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e-~dv~~g~~~l~~i 430 (490)
..+..+.++.+..++.|.......-.+.|||.+| +|||.++..... ..+ ......+.++. +++. ..|.++
T Consensus 264 ~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G-~Pvv~s~~~~~~---~~i--~~~~~g~~~~~~~~~a---~~i~~l 334 (372)
T cd03792 264 DLEVNALQRASTVVLQKSIREGFGLTVTEALWKG-KPVIAGPVGGIP---LQI--EDGETGFLVDTVEEAA---VRILYL 334 (372)
T ss_pred HHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcC-CCEEEcCCCCch---hhc--ccCCceEEeCCcHHHH---HHHHHH
Confidence 3577888999999999876554455699999999 599998753210 001 11222333332 2221 134444
Q ss_pred HhcCCHHHHHHHHHHHhhh-cceeEEe
Q 011220 431 LESYSQEEVKRMRDKVIDY-IPKFIYA 456 (490)
Q Consensus 431 L~~Is~~~i~~Mr~~l~~v-~~~f~Y~ 456 (490)
|. .++...+|.++..+. ..+|.|.
T Consensus 335 l~--~~~~~~~~~~~a~~~~~~~~s~~ 359 (372)
T cd03792 335 LR--DPELRRKMGANAREHVRENFLIT 359 (372)
T ss_pred Hc--CHHHHHHHHHHHHHHHHHHcCHH
Confidence 43 366778888876653 3455543
No 51
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=71.21 E-value=9.8 Score=36.96 Aligned_cols=62 Identities=8% Similarity=-0.012 Sum_probs=39.8
Q ss_pred hHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccc
Q 011220 354 AILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVR 421 (490)
Q Consensus 354 ~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~ 421 (490)
+..+.+..|.++++|.-.......+.|||.+||. ||.+|..... ++ .+-....+.++.++..
T Consensus 256 ~~~~~~~~~d~~i~ps~~e~~~~~~~Ea~~~G~P-vI~~~~~~~~----e~-i~~~~~g~~~~~~~~~ 317 (353)
T cd03811 256 NPYPYLKAADLFVLSSRYEGFPNVLLEAMALGTP-VVATDCPGPR----EI-LEDGENGLLVPVGDEA 317 (353)
T ss_pred CHHHHHHhCCEEEeCcccCCCCcHHHHHHHhCCC-EEEcCCCChH----HH-hcCCCceEEECCCCHH
Confidence 4567899999999997555445669999999986 5566532110 01 1223456666766554
No 52
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=69.37 E-value=13 Score=37.14 Aligned_cols=93 Identities=13% Similarity=0.091 Sum_probs=54.0
Q ss_pred hhHHHhhccCeEEeccCCC------CCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccccCccc
Q 011220 353 SAILETFLDSVFCLQPRGD------SFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKS 426 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gd------s~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~ 426 (490)
.++.+.++++.+++.|... ......++|||.+||-.| .++..... ++- +-..-...+++.+.. +
T Consensus 247 ~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi-~~~~~~~~----~~i-~~~~~g~~~~~~~~~----~ 316 (355)
T cd03799 247 EEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVI-STDVSGIP----ELV-EDGETGLLVPPGDPE----A 316 (355)
T ss_pred HHHHHHHHhCCEEEecceecCCCCccCccHHHHHHHHcCCCEE-ecCCCCcc----hhh-hCCCceEEeCCCCHH----H
Confidence 5788899999999998654 333456999999998655 45432110 010 112235555554444 4
Q ss_pred HHHHHhcC--CHHHHHHHHHHHhhh-cceeEE
Q 011220 427 IKAVLESY--SQEEVKRMRDKVIDY-IPKFIY 455 (490)
Q Consensus 427 l~~iL~~I--s~~~i~~Mr~~l~~v-~~~f~Y 455 (490)
+.+.|..+ .+++..+|.++..+. ..+|-|
T Consensus 317 l~~~i~~~~~~~~~~~~~~~~a~~~~~~~~s~ 348 (355)
T cd03799 317 LADAIERLLDDPELRREMGEAGRARVEEEFDI 348 (355)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCH
Confidence 44444433 355677777776543 344443
No 53
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=68.91 E-value=7.4 Score=41.55 Aligned_cols=93 Identities=10% Similarity=0.126 Sum_probs=50.6
Q ss_pred hHHHhhccC----eEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccccCcccHHH
Q 011220 354 AILETFLDS----VFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKA 429 (490)
Q Consensus 354 ~y~~~m~~S----~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~l~~ 429 (490)
+..+.++.+ ..++.|.-.......+.|||.+|| |||.++..... +. + +-..-.+.++..|.. .+.+
T Consensus 329 ~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~-PvV~s~~gg~~--ei-v--~~~~~G~lv~~~d~~----~la~ 398 (439)
T TIGR02472 329 DVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGL-PIVATDDGGPR--DI-I--ANCRNGLLVDVLDLE----AIAS 398 (439)
T ss_pred HHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCC-CEEEeCCCCcH--HH-h--cCCCcEEEeCCCCHH----HHHH
Confidence 455556554 444445433333345999999999 99999853210 01 1 223345666665554 3333
Q ss_pred HHhcC--CHHHHHHHHHHHhh-hcceeEEe
Q 011220 430 VLESY--SQEEVKRMRDKVID-YIPKFIYA 456 (490)
Q Consensus 430 iL~~I--s~~~i~~Mr~~l~~-v~~~f~Y~ 456 (490)
.+..+ .+++..+|.++..+ +..+|.|.
T Consensus 399 ~i~~ll~~~~~~~~~~~~a~~~~~~~fsw~ 428 (439)
T TIGR02472 399 ALEDALSDSSQWQLWSRNGIEGVRRHYSWD 428 (439)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHhCCHH
Confidence 33322 35666777766543 44556554
No 54
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=68.29 E-value=17 Score=36.32 Aligned_cols=87 Identities=7% Similarity=0.133 Sum_probs=53.7
Q ss_pred hhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccccCcccHHHHHh
Q 011220 353 SAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAVLE 432 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~l~~iL~ 432 (490)
.++.+.|+.|.+.+.|.........+.|||.+||- ||.++...... +- +-..-.+.++..+.. ++.+.|.
T Consensus 256 ~~~~~~~~~ad~~l~ps~~e~~g~~~~Eam~~g~P-vI~~~~~~~~e----~~-~~~~~g~~~~~~~~~----~~~~~l~ 325 (365)
T cd03825 256 ESLALIYSAADVFVVPSLQENFPNTAIEALACGTP-VVAFDVGGIPD----IV-DHGVTGYLAKPGDPE----DLAEGIE 325 (365)
T ss_pred HHHHHHHHhCCEEEeccccccccHHHHHHHhcCCC-EEEecCCCChh----he-eCCCceEEeCCCCHH----HHHHHHH
Confidence 45778899999999998766666779999999985 66665322111 11 112345566655444 3444333
Q ss_pred cC--CHHHHHHHHHHHhhh
Q 011220 433 SY--SQEEVKRMRDKVIDY 449 (490)
Q Consensus 433 ~I--s~~~i~~Mr~~l~~v 449 (490)
.+ .+++..+|.++..+.
T Consensus 326 ~l~~~~~~~~~~~~~~~~~ 344 (365)
T cd03825 326 WLLADPDEREELGEAAREL 344 (365)
T ss_pred HHHhCHHHHHHHHHHHHHH
Confidence 32 355677787776543
No 55
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=66.93 E-value=3.3 Score=43.32 Aligned_cols=41 Identities=10% Similarity=0.044 Sum_probs=31.2
Q ss_pred hhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecC
Q 011220 353 SAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKR 394 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~ 394 (490)
.++.+.++.+..++.|.-.......+.|||.+|| |||.++.
T Consensus 261 ~~~~~~l~~ad~~v~pS~~E~~g~~~~EAma~G~-PVI~s~~ 301 (398)
T cd03796 261 ERVRDVLVQGHIFLNTSLTEAFCIAIVEAASCGL-LVVSTRV 301 (398)
T ss_pred HHHHHHHHhCCEEEeCChhhccCHHHHHHHHcCC-CEEECCC
Confidence 5788899999999988644333457999999998 5666663
No 56
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=66.69 E-value=7.8 Score=41.93 Aligned_cols=87 Identities=13% Similarity=0.063 Sum_probs=53.3
Q ss_pred hhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCC-----CceEEEEeccccccCcccH
Q 011220 353 SAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEP-----GSYSVFIDRNEVRNGTKSI 427 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw-----~~fSV~I~e~dv~~g~~~l 427 (490)
.++.+.|..+..++.|.-.......++|||.+|| |||.+|..... ++--+- ....+.++..|.. ++
T Consensus 362 ~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~-PVVatd~g~~~----elv~~~~~~~~g~~G~lv~~~d~~----~l 432 (475)
T cd03813 362 QNVKEYLPKLDVLVLTSISEGQPLVILEAMAAGI-PVVATDVGSCR----ELIEGADDEALGPAGEVVPPADPE----AL 432 (475)
T ss_pred ccHHHHHHhCCEEEeCchhhcCChHHHHHHHcCC-CEEECCCCChH----HHhcCCcccccCCceEEECCCCHH----HH
Confidence 3567788889988888633333456999999999 88888743211 111121 2356667766555 44
Q ss_pred HHHHhcC--CHHHHHHHHHHHhh
Q 011220 428 KAVLESY--SQEEVKRMRDKVID 448 (490)
Q Consensus 428 ~~iL~~I--s~~~i~~Mr~~l~~ 448 (490)
.+.+..+ .++...+|.++..+
T Consensus 433 a~ai~~ll~~~~~~~~~~~~a~~ 455 (475)
T cd03813 433 ARAILRLLKDPELRRAMGEAGRK 455 (475)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHH
Confidence 4444332 46777888777654
No 57
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=66.05 E-value=5.5 Score=41.00 Aligned_cols=40 Identities=13% Similarity=0.086 Sum_probs=30.9
Q ss_pred hhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeec
Q 011220 353 SAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWK 393 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd 393 (490)
..+.+.++.+..++.|.........++|||.+| +|||.+|
T Consensus 249 ~~~~~~~~~~d~~v~~s~~Egf~~~~lEAma~G-~Pvv~s~ 288 (359)
T PRK09922 249 EVVQQKIKNVSALLLTSKFEGFPMTLLEAMSYG-IPCISSD 288 (359)
T ss_pred HHHHHHHhcCcEEEECCcccCcChHHHHHHHcC-CCEEEeC
Confidence 345667788888888876554456799999999 6788887
No 58
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=65.98 E-value=13 Score=39.34 Aligned_cols=89 Identities=10% Similarity=0.159 Sum_probs=50.4
Q ss_pred hhhHHHhhccCeEEeccC----CCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEe-ccccccCccc
Q 011220 352 TSAILETFLDSVFCLQPR----GDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFID-RNEVRNGTKS 426 (490)
Q Consensus 352 ~~~y~~~m~~S~FCL~P~----Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~-e~dv~~g~~~ 426 (490)
..++.+.|+.|..++.|. |.+. ...++|||.+|+ |||.++... .+ ++= +-..-.+.++ .+++. ..
T Consensus 305 ~~~~~~~l~~aDv~v~~~~~~~~~~~-p~~~~Eama~G~-PVI~s~~~~-~~---eiv-~~~~~G~lv~d~~~la---~~ 374 (415)
T cd03816 305 AEDYPKLLASADLGVSLHTSSSGLDL-PMKVVDMFGCGL-PVCALDFKC-ID---ELV-KHGENGLVFGDSEELA---EQ 374 (415)
T ss_pred HHHHHHHHHhCCEEEEccccccccCC-cHHHHHHHHcCC-CEEEeCCCC-HH---HHh-cCCCCEEEECCHHHHH---HH
Confidence 467888999999887532 4443 345999999998 999987421 00 010 1122233332 12222 12
Q ss_pred HHHHHhc-CCHHHHHHHHHHHhhhc
Q 011220 427 IKAVLES-YSQEEVKRMRDKVIDYI 450 (490)
Q Consensus 427 l~~iL~~-Is~~~i~~Mr~~l~~v~ 450 (490)
|..+|.. .++++..+|.++..+..
T Consensus 375 i~~ll~~~~~~~~~~~m~~~~~~~~ 399 (415)
T cd03816 375 LIDLLSNFPNRGKLNSLKKGAQEES 399 (415)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHhh
Confidence 3334442 12678888888765543
No 59
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=60.25 E-value=24 Score=37.29 Aligned_cols=85 Identities=18% Similarity=0.313 Sum_probs=46.7
Q ss_pred hhHHHhhccC--eEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCC--CCCceEEEEec-cccccCcccH
Q 011220 353 SAILETFLDS--VFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPD--EPGSYSVFIDR-NEVRNGTKSI 427 (490)
Q Consensus 353 ~~y~~~m~~S--~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPf--dw~~fSV~I~e-~dv~~g~~~l 427 (490)
.+..+.++.+ ...+.|.-.....-.+.|||.+|+ |||.+|... .|- +-..-.+.++. +++. ++
T Consensus 300 ~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~-PVIas~vgg-------~~e~i~~~~~G~l~~~~~~~~----~l 367 (407)
T cd04946 300 SEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGI-PVIATNVGG-------TPEIVDNGGNGLLLSKDPTPN----EL 367 (407)
T ss_pred HHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCC-CEEeCCCCC-------cHHHhcCCCcEEEeCCCCCHH----HH
Confidence 3556666653 333334333223456999999995 999887421 221 22223445543 2333 34
Q ss_pred HHHHhcC--CHHHHHHHHHHHhhh
Q 011220 428 KAVLESY--SQEEVKRMRDKVIDY 449 (490)
Q Consensus 428 ~~iL~~I--s~~~i~~Mr~~l~~v 449 (490)
.+.|..+ .+++..+|+++..+.
T Consensus 368 a~~I~~ll~~~~~~~~m~~~ar~~ 391 (407)
T cd04946 368 VSSLSKFIDNEEEYQTMREKAREK 391 (407)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHH
Confidence 4444332 478888898886553
No 60
>PHA01633 putative glycosyl transferase group 1
Probab=57.90 E-value=12 Score=39.03 Aligned_cols=41 Identities=20% Similarity=0.289 Sum_probs=33.9
Q ss_pred hhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecC
Q 011220 353 SAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKR 394 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~ 394 (490)
.+..+.++.|.+.+.|.-......-+.|||.+|| |||-++-
T Consensus 215 ~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~-PVVas~~ 255 (335)
T PHA01633 215 EYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGT-PVIHQLM 255 (335)
T ss_pred HHHHHHHHhCCEEEECCccccCCHHHHHHHHcCC-CEEEccC
Confidence 5678899999998888765555566999999999 9999874
No 61
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=56.08 E-value=60 Score=34.35 Aligned_cols=96 Identities=14% Similarity=0.185 Sum_probs=55.0
Q ss_pred hhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccccCcccHHHHHh
Q 011220 353 SAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAVLE 432 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~l~~iL~ 432 (490)
.+..+++.++++-+.-.=+..---++.|+|++|-|||.=..+- .-...+.|+|-+.-...- +++..- ...+.+|+.
T Consensus 348 ~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgG--P~lDIV~~~~G~~tGFla-~t~~EY-aE~iLkIv~ 423 (465)
T KOG1387|consen 348 EKLVELLGKATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGG--PLLDIVTPWDGETTGFLA-PTDEEY-AEAILKIVK 423 (465)
T ss_pred HHHHHHhccceeehhhhhhhhcchhHHHHHhcCceEEEeCCCC--CceeeeeccCCccceeec-CChHHH-HHHHHHHHH
Confidence 4678899999999987655544456999999999998765432 112244555433322222 221110 002444444
Q ss_pred cCCHHHHHHHHHHHhhhccee
Q 011220 433 SYSQEEVKRMRDKVIDYIPKF 453 (490)
Q Consensus 433 ~Is~~~i~~Mr~~l~~v~~~f 453 (490)
. ..++...||++-+.-.-+|
T Consensus 424 ~-~~~~r~~~r~~AR~s~~RF 443 (465)
T KOG1387|consen 424 L-NYDERNMMRRNARKSLARF 443 (465)
T ss_pred c-CHHHHHHHHHHHHHHHHHh
Confidence 3 3455778888765444444
No 62
>PRK10307 putative glycosyl transferase; Provisional
Probab=55.47 E-value=12 Score=39.33 Aligned_cols=96 Identities=8% Similarity=0.017 Sum_probs=58.0
Q ss_pred hhhHHHhhccCeEEeccCCCCC----CchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccccCcccH
Q 011220 352 TSAILETFLDSVFCLQPRGDSF----TRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSI 427 (490)
Q Consensus 352 ~~~y~~~m~~S~FCL~P~Gds~----ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~l 427 (490)
..++.+.|+.|..++.|.=.+. ....++|||.+| +|||.++...-...+. . + .-.+.++..++. ++
T Consensus 294 ~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G-~PVi~s~~~g~~~~~~-i--~--~~G~~~~~~d~~----~l 363 (412)
T PRK10307 294 YDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASG-RNVVATAEPGTELGQL-V--E--GIGVCVEPESVE----AL 363 (412)
T ss_pred HHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcC-CCEEEEeCCCchHHHH-H--h--CCcEEeCCCCHH----HH
Confidence 3577888999999888743221 123489999999 6888886321000001 1 2 345666666665 56
Q ss_pred HHHHhcC--CHHHHHHHHHHHhh-hcceeEEec
Q 011220 428 KAVLESY--SQEEVKRMRDKVID-YIPKFIYAK 457 (490)
Q Consensus 428 ~~iL~~I--s~~~i~~Mr~~l~~-v~~~f~Y~~ 457 (490)
.+.|..+ .++...+|+++..+ +..+|-|..
T Consensus 364 a~~i~~l~~~~~~~~~~~~~a~~~~~~~fs~~~ 396 (412)
T PRK10307 364 VAAIAALARQALLRPKLGTVAREYAERTLDKEN 396 (412)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHH
Confidence 6666554 35677888888765 344665543
No 63
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=51.78 E-value=44 Score=33.36 Aligned_cols=40 Identities=10% Similarity=-0.029 Sum_probs=32.2
Q ss_pred hhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeec
Q 011220 353 SAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWK 393 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd 393 (490)
.+..+.+.++.++++|.-.......+.|||.+||-. |.++
T Consensus 258 ~~~~~~~~~adi~v~ps~~E~~~~~~lEAma~G~Pv-I~s~ 297 (358)
T cd03812 258 NDVPELLQAMDVFLFPSLYEGLPLVLIEAQASGLPC-ILSD 297 (358)
T ss_pred CCHHHHHHhcCEEEecccccCCCHHHHHHHHhCCCE-EEEc
Confidence 356788999999999986666667799999999854 5555
No 64
>PLN02939 transferase, transferring glycosyl groups
Probab=50.89 E-value=27 Score=41.46 Aligned_cols=38 Identities=16% Similarity=0.077 Sum_probs=32.0
Q ss_pred HHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeec
Q 011220 356 LETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWK 393 (490)
Q Consensus 356 ~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd 393 (490)
...++.|.+++.|.=..+..-...+||.+||+||+..-
T Consensus 851 h~IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~v 888 (977)
T PLN02939 851 HSIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKT 888 (977)
T ss_pred HHHHHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecC
Confidence 46789999999998777766779999999999997643
No 65
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=44.65 E-value=24 Score=30.26 Aligned_cols=41 Identities=17% Similarity=0.181 Sum_probs=27.1
Q ss_pred hhHHHhhccCeEEeccCC-CCCCchhHHHHHhhCceeEEeecC
Q 011220 353 SAILETFLDSVFCLQPRG-DSFTRRSIFDCMVAGSIPVFFWKR 394 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~G-ds~ssrrl~DAi~aGCIPViisd~ 394 (490)
.++.+.++++.+++.|.- +...+..++|+|.+||- ||.++.
T Consensus 62 ~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~p-vi~~~~ 103 (135)
T PF13692_consen 62 EELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKP-VIASDN 103 (135)
T ss_dssp HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT---EEEEHH
T ss_pred HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCC-EEECCc
Confidence 478999999999999973 22345679999999985 555553
No 66
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=44.65 E-value=30 Score=31.54 Aligned_cols=41 Identities=10% Similarity=-0.012 Sum_probs=31.6
Q ss_pred hhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecC
Q 011220 353 SAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKR 394 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~ 394 (490)
..+...++.|..++.|.........++|||.+||. ||.++.
T Consensus 173 ~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~p-vi~s~~ 213 (229)
T cd01635 173 ELLALLLAAADVFVLPSLREGFGLVVLEAMACGLP-VIATDV 213 (229)
T ss_pred HHHHHHhhcCCEEEecccccCcChHHHHHHhCCCC-EEEcCC
Confidence 45556666699999999877777889999999864 555654
No 67
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=44.35 E-value=42 Score=34.99 Aligned_cols=35 Identities=14% Similarity=0.194 Sum_probs=27.5
Q ss_pred hHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeec
Q 011220 354 AILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWK 393 (490)
Q Consensus 354 ~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd 393 (490)
+..+.|+.|...+.++| +. .+.|||.+|+ |||+.+
T Consensus 275 ~~~~l~~aaDv~V~~~g--~~--ti~EAma~g~-PvI~~~ 309 (382)
T PLN02605 275 NMEEWMGACDCIITKAG--PG--TIAEALIRGL-PIILNG 309 (382)
T ss_pred cHHHHHHhCCEEEECCC--cc--hHHHHHHcCC-CEEEec
Confidence 57888999999888776 22 3799999997 677765
No 68
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=42.75 E-value=40 Score=40.44 Aligned_cols=93 Identities=13% Similarity=0.144 Sum_probs=53.5
Q ss_pred hHHHhhccC-----eEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccccCcccHH
Q 011220 354 AILETFLDS-----VFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIK 428 (490)
Q Consensus 354 ~y~~~m~~S-----~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~l~ 428 (490)
+..+.++.+ .||+ |.=..+----+.|||.+|+ |||.++.... + ++ .+-..-.+.|+..|.. .|-
T Consensus 560 dvp~lYr~Ad~s~DVFV~-PS~~EgFGLvlLEAMAcGl-PVVASdvGG~-~---EI-I~~g~nGlLVdP~D~e----aLA 628 (1050)
T TIGR02468 560 DVPDIYRLAAKTKGVFIN-PAFIEPFGLTLIEAAAHGL-PMVATKNGGP-V---DI-HRVLDNGLLVDPHDQQ----AIA 628 (1050)
T ss_pred HHHHHHHHhhhcCCeeeC-CcccCCCCHHHHHHHHhCC-CEEEeCCCCc-H---HH-hccCCcEEEECCCCHH----HHH
Confidence 445556554 4544 5433333345999999995 8999874210 0 01 0223456677766655 444
Q ss_pred HHHhcC--CHHHHHHHHHHHhhhcceeEEec
Q 011220 429 AVLESY--SQEEVKRMRDKVIDYIPKFIYAK 457 (490)
Q Consensus 429 ~iL~~I--s~~~i~~Mr~~l~~v~~~f~Y~~ 457 (490)
+.|..+ .++...+|.++..+...+|-|..
T Consensus 629 ~AL~~LL~Dpelr~~m~~~gr~~v~~FSWe~ 659 (1050)
T TIGR02468 629 DALLKLVADKQLWAECRQNGLKNIHLFSWPE 659 (1050)
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHHHHCCHHH
Confidence 444433 46677888888776666665543
No 69
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=42.70 E-value=51 Score=33.19 Aligned_cols=35 Identities=11% Similarity=0.305 Sum_probs=28.0
Q ss_pred hHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeec
Q 011220 354 AILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWK 393 (490)
Q Consensus 354 ~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd 393 (490)
++.+.|..+..++.+.| ...++|||.+|+ |||+.+
T Consensus 243 ~~~~~l~~ad~~v~~~g----~~~l~Ea~~~g~-Pvv~~~ 277 (348)
T TIGR01133 243 NMAAAYAAADLVISRAG----ASTVAELAAAGV-PAILIP 277 (348)
T ss_pred CHHHHHHhCCEEEECCC----hhHHHHHHHcCC-CEEEee
Confidence 67889999999999876 235899999996 777654
No 70
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=38.78 E-value=31 Score=37.40 Aligned_cols=87 Identities=8% Similarity=0.110 Sum_probs=52.7
Q ss_pred hhhHHHhhccCeEEeccCC-CCCCchhHHHHHhhCce---eEEeecCcccccccccCCCCCCceEEEEeccccccCcccH
Q 011220 352 TSAILETFLDSVFCLQPRG-DSFTRRSIFDCMVAGSI---PVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSI 427 (490)
Q Consensus 352 ~~~y~~~m~~S~FCL~P~G-ds~ssrrl~DAi~aGCI---PViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~l 427 (490)
..++.+.++.+.-++.|.- ++.+ --+.|||.+||= |||+++...-.. . ..-.+.|+..|+. ++
T Consensus 351 ~~el~~~y~~aDv~v~pS~~Eg~~-lv~lEAma~g~p~~g~vV~S~~~G~~~----~----~~~g~lv~p~d~~----~l 417 (460)
T cd03788 351 REELAALYRAADVALVTPLRDGMN-LVAKEYVACQDDDPGVLILSEFAGAAE----E----LSGALLVNPYDID----EV 417 (460)
T ss_pred HHHHHHHHHhccEEEeCccccccC-cccceeEEEecCCCceEEEeccccchh----h----cCCCEEECCCCHH----HH
Confidence 4577888999988887753 3333 347899999996 699997432111 1 2235667665554 34
Q ss_pred HHHHh---cCCHHHHHHHHHHHhhhcc
Q 011220 428 KAVLE---SYSQEEVKRMRDKVIDYIP 451 (490)
Q Consensus 428 ~~iL~---~Is~~~i~~Mr~~l~~v~~ 451 (490)
-+.|. ..++++..+|.++..+...
T Consensus 418 a~ai~~~l~~~~~e~~~~~~~~~~~v~ 444 (460)
T cd03788 418 ADAIHRALTMPLEERRERHRKLREYVR 444 (460)
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 44332 2356666666666554433
No 71
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=38.32 E-value=42 Score=35.39 Aligned_cols=41 Identities=7% Similarity=-0.062 Sum_probs=28.1
Q ss_pred hhHHHhhccCeEEeccCCC-CCCchhHHHHHhhCceeEEeecC
Q 011220 353 SAILETFLDSVFCLQPRGD-SFTRRSIFDCMVAGSIPVFFWKR 394 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gd-s~ssrrl~DAi~aGCIPViisd~ 394 (490)
.+..+.++.+..|+++... ......+.|||.+|| |||.++.
T Consensus 311 ~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~-PVI~g~~ 352 (425)
T PRK05749 311 GELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGV-PVISGPH 352 (425)
T ss_pred HHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCC-CEEECCC
Confidence 4678888999887665322 112233899999996 7888764
No 72
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=35.72 E-value=72 Score=35.08 Aligned_cols=94 Identities=10% Similarity=0.168 Sum_probs=49.3
Q ss_pred hHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEec----cc----cccCcc
Q 011220 354 AILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDR----NE----VRNGTK 425 (490)
Q Consensus 354 ~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e----~d----v~~g~~ 425 (490)
+..+.++.+.-++.|.=.......+.|||.+|| |||.+|-. |-.-++. +-..-.+.|+. .+ +..-..
T Consensus 385 ~~~~~~~~adv~v~pS~~Egfgl~~lEAma~G~-PVI~~dv~-~G~~eiI---~~g~nG~lv~~~~~~~d~~~~~~~la~ 459 (500)
T TIGR02918 385 NLSEVYKDYELYLSASTSEGFGLTLMEAVGSGL-GMIGFDVN-YGNPTFI---EDNKNGYLIPIDEEEDDEDQIITALAE 459 (500)
T ss_pred CHHHHHHhCCEEEEcCccccccHHHHHHHHhCC-CEEEecCC-CCCHHHc---cCCCCEEEEeCCccccchhHHHHHHHH
Confidence 455667777777766533333455999999997 67776621 1110111 11223344441 11 210000
Q ss_pred cHHHHHhcCCHHHHHHHHHHHhhhcceeEE
Q 011220 426 SIKAVLESYSQEEVKRMRDKVIDYIPKFIY 455 (490)
Q Consensus 426 ~l~~iL~~Is~~~i~~Mr~~l~~v~~~f~Y 455 (490)
.|..+| .+++..+|.++..+....|.|
T Consensus 460 ~I~~ll---~~~~~~~~~~~a~~~a~~fs~ 486 (500)
T TIGR02918 460 KIVEYF---NSNDIDAFHEYSYQIAEGFLT 486 (500)
T ss_pred HHHHHh---ChHHHHHHHHHHHHHHHhcCH
Confidence 133333 456788888888776666544
No 73
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=34.66 E-value=44 Score=37.48 Aligned_cols=41 Identities=7% Similarity=-0.063 Sum_probs=32.7
Q ss_pred hhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecC
Q 011220 353 SAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKR 394 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~ 394 (490)
.+..+.|+.+..++.|.=.......+.|||.+|| |||.++.
T Consensus 464 ~Dv~~~LaaADVfVlPS~~EGfp~vlLEAMA~Gl-PVVATdv 504 (578)
T PRK15490 464 RDVGYWLQKMNVFILFSRYEGLPNVLIEAQMVGV-PVISTPA 504 (578)
T ss_pred hhHHHHHHhCCEEEEcccccCccHHHHHHHHhCC-CEEEeCC
Confidence 3566778888888888655555667999999999 9998874
No 74
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=33.44 E-value=1.3e+02 Score=30.17 Aligned_cols=35 Identities=14% Similarity=0.236 Sum_probs=28.5
Q ss_pred hhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeec
Q 011220 353 SAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWK 393 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd 393 (490)
.+..+.|..|...++..| -| ++|++.+| +|+|+-.
T Consensus 233 ~~m~~lm~~aDl~Is~~G--~T---~~E~~a~g-~P~i~i~ 267 (279)
T TIGR03590 233 ENMAELMNEADLAIGAAG--ST---SWERCCLG-LPSLAIC 267 (279)
T ss_pred HHHHHHHHHCCEEEECCc--hH---HHHHHHcC-CCEEEEE
Confidence 467899999999999866 22 89999999 7877653
No 75
>PF00919 UPF0004: Uncharacterized protein family UPF0004; InterPro: IPR013848 The methylthiotransferase (MTTase) or miaB-like family is named after the (dimethylallyl)adenosine tRNA MTTase miaB protein, which catalyses a C-H to C-S bond conversion in the methylthiolation of tRNA. A related bacterial enzyme rimO performs a similar methylthiolation, but on a protein substrate. RimO acts on the ribosomal protein S12 and forms a separate MTTase subfamily. The miaB-subfamily includes mammalian CDK5 regulatory subunit-associated proteins and similar proteins in other eukaryotes. Two other subfamilies, yqeV and CDKAL1, are named after a Bacillus subtilis and a human protein, respectively. While yqeV-like proteins are found in bacteria, CDKAL1 subfamily members occur in eukaryotes and in archaebacteria. The likely MTTases from these 4 subfamilies contain an N-terminal MTTase domain, a central radical generating fold and a C-terminal TRAM domain (see PDOC50926 from PROSITEDOC). The core forms a radical SAM fold (or AdoMet radical), containing a cysteine motif CxxxCxxC that binds a [4Fe-4S] cluster [, , ]. A reducing equivalent from the [4Fe-4S]+ cluster is used to cleave S-adenosylmethionine (SAM) to generate methionine and a 5'-deoxyadenosyl radical. The latter is thought to produce a reactive substrate radical that is amenable to sulphur insertion [, ]. The N-terminal MTTase domain contains 3 cysteines that bind a second [4Fe-4S] cluster, in addition to the radical-generating [4Fe-4S] cluster, which could be involved in the thiolation reaction. The C-terminal TRAM domain is not shared with other radical SAM proteins outside the MTTase family. The TRAM domain can bind to RNA substrate and seems to be important for substrate recognition. The tertiary structure of the central radical SAM fold has six beta/alpha motifs resembling a three-quarter TIM barrel core (see PDOC00155 from PROSITEDOC) []. The N-terminal MTTase domain might form an additional [beta/alpha]2 TIM barrel unit []. ; GO: 0003824 catalytic activity, 0051539 4 iron, 4 sulfur cluster binding, 0009451 RNA modification
Probab=32.55 E-value=43 Score=28.49 Aligned_cols=36 Identities=22% Similarity=0.138 Sum_probs=25.5
Q ss_pred cCchhhhHHHHHHhccC-ccccCCCCCceEEEEeccccccc
Q 011220 154 TDQFVLEIIFHRRILNH-RCRTLEPESAAAFYIPFYVGLAV 193 (490)
Q Consensus 154 t~qf~~E~ifh~rLl~s-~~rT~DPeeAdlFyVP~y~~l~~ 193 (490)
.+++-+|.+. ..|.+. --.|.+|++||+++|= +|.+
T Consensus 11 ~N~~Dse~i~-~~l~~~G~~~~~~~e~AD~iiiN---TC~V 47 (98)
T PF00919_consen 11 MNQYDSERIA-SILQAAGYEIVDDPEEADVIIIN---TCTV 47 (98)
T ss_pred ccHHHHHHHH-HHHHhcCCeeecccccCCEEEEE---cCCC
Confidence 4777888773 444444 4689999999999774 5654
No 76
>PLN00142 sucrose synthase
Probab=29.44 E-value=85 Score=36.81 Aligned_cols=97 Identities=13% Similarity=0.123 Sum_probs=52.8
Q ss_pred HHHhhcc-CeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCC--CCCceEEEEeccccccCcccHHHHH
Q 011220 355 ILETFLD-SVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPD--EPGSYSVFIDRNEVRNGTKSIKAVL 431 (490)
Q Consensus 355 y~~~m~~-S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPf--dw~~fSV~I~e~dv~~g~~~l~~iL 431 (490)
+...++. +..+++|.=+..-.-.+.|||.+|+ |||.++.-. ++. ....-.+.|+..+...-...|.+.|
T Consensus 659 Lyr~iadaaDVfVlPS~~EgFGLvvLEAMA~Gl-PVVATdvGG-------~~EIV~dG~tG~LV~P~D~eaLA~aI~~lL 730 (815)
T PLN00142 659 LYRYIADTKGAFVQPALYEAFGLTVVEAMTCGL-PTFATCQGG-------PAEIIVDGVSGFHIDPYHGDEAANKIADFF 730 (815)
T ss_pred HHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCC-CEEEcCCCC-------HHHHhcCCCcEEEeCCCCHHHHHHHHHHHH
Confidence 3344443 3444566544444456999999997 677776421 111 2234466666555440000233333
Q ss_pred hc--CCHHHHHHHHHHH-hhhcceeEEecCC
Q 011220 432 ES--YSQEEVKRMRDKV-IDYIPKFIYAKSR 459 (490)
Q Consensus 432 ~~--Is~~~i~~Mr~~l-~~v~~~f~Y~~p~ 459 (490)
+. -.++...+|.++. .++..+|.|....
T Consensus 731 ekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A 761 (815)
T PLN00142 731 EKCKEDPSYWNKISDAGLQRIYECYTWKIYA 761 (815)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 22 1467778888775 4466788876643
No 77
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=29.23 E-value=44 Score=35.10 Aligned_cols=86 Identities=14% Similarity=0.201 Sum_probs=47.0
Q ss_pred hHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCccccccc--ccCCCCCCceEEEEec-cccccCcccHHHH
Q 011220 354 AILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYA--WFLPDEPGSYSVFIDR-NEVRNGTKSIKAV 430 (490)
Q Consensus 354 ~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~--~~LPfdw~~fSV~I~e-~dv~~g~~~l~~i 430 (490)
++.+.|+.|.+++..+|- -.+.|||.+|+ |||+.+...-++.+ ..+ .-..+.+.+.. +++. ..|.++
T Consensus 266 ~~~~~~~~aDl~I~k~gg----~tl~EA~a~G~-PvI~~~~~pgqe~~N~~~~--~~~G~g~~~~~~~~l~---~~i~~l 335 (391)
T PRK13608 266 HMNEWMASSQLMITKPGG----ITISEGLARCI-PMIFLNPAPGQELENALYF--EEKGFGKIADTPEEAI---KIVASL 335 (391)
T ss_pred hHHHHHHhhhEEEeCCch----HHHHHHHHhCC-CEEECCCCCCcchhHHHHH--HhCCcEEEeCCHHHHH---HHHHHH
Confidence 567889999999885542 24899999985 88887531000000 000 01234444321 1222 023333
Q ss_pred HhcCCHHHHHHHHHHHhhhcc
Q 011220 431 LESYSQEEVKRMRDKVIDYIP 451 (490)
Q Consensus 431 L~~Is~~~i~~Mr~~l~~v~~ 451 (490)
|. .+++..+|+++..+...
T Consensus 336 l~--~~~~~~~m~~~~~~~~~ 354 (391)
T PRK13608 336 TN--GNEQLTNMISTMEQDKI 354 (391)
T ss_pred hc--CHHHHHHHHHHHHHhcC
Confidence 33 46788899998765443
No 78
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=28.97 E-value=1e+02 Score=33.46 Aligned_cols=82 Identities=9% Similarity=0.141 Sum_probs=49.5
Q ss_pred hhhHHHhhccCeEEeccC-CCCCCchhHHHHHhhCcee----EEeecCcccccccccCCCCCCceEEEEeccccccCccc
Q 011220 352 TSAILETFLDSVFCLQPR-GDSFTRRSIFDCMVAGSIP----VFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKS 426 (490)
Q Consensus 352 ~~~y~~~m~~S~FCL~P~-Gds~ssrrl~DAi~aGCIP----Viisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~ 426 (490)
..+..+.++.+.-|+.|. .++.+ --..|||.+|+ | ||+++..--. -.+ . -++.|+..|.. .
T Consensus 346 ~~el~aly~aaDv~vv~S~~EG~~-Lv~lEamA~g~-P~~g~vVlS~~~G~~---~~l--~---~gllVnP~d~~----~ 411 (456)
T TIGR02400 346 REELMALYRAADVGLVTPLRDGMN-LVAKEYVAAQD-PKDGVLILSEFAGAA---QEL--N---GALLVNPYDID----G 411 (456)
T ss_pred HHHHHHHHHhCcEEEECccccccC-ccHHHHHHhcC-CCCceEEEeCCCCCh---HHh--C---CcEEECCCCHH----H
Confidence 467888999999888865 44444 34899999996 8 8998742101 113 1 36777766655 3
Q ss_pred HHHHHhc---CCHHHHHHHHHHHh
Q 011220 427 IKAVLES---YSQEEVKRMRDKVI 447 (490)
Q Consensus 427 l~~iL~~---Is~~~i~~Mr~~l~ 447 (490)
+-+.|.. .++++..++.+++.
T Consensus 412 lA~aI~~aL~~~~~er~~r~~~~~ 435 (456)
T TIGR02400 412 MADAIARALTMPLEEREERHRAMM 435 (456)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4443322 35555444444443
No 79
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=28.64 E-value=7.4e+02 Score=26.39 Aligned_cols=111 Identities=16% Similarity=0.112 Sum_probs=61.2
Q ss_pred CCCCCceeeeecccccCCchhHHHHHHhhhhcCCCCeEEEecCCC-c--ccCC--------hhhHHHhhccCeEEeccCC
Q 011220 302 RSRNRSSLYCFAGATRMVKNDFRSMLLSHCKNESGSCRVVDCEGT-R--CMNG--------TSAILETFLDSVFCLQPRG 370 (490)
Q Consensus 302 ~~~~R~~L~~FaG~~~~~~~~iR~~L~~~~~~~~~~~~~~~c~~~-~--c~~~--------~~~y~~~m~~S~FCL~P~G 370 (490)
....|+.+.+-.|+.... ..+=+.+++.|...+..+.+ +.++ + +... -....+.+.+|.=-++..|
T Consensus 233 ~~~d~~~vyvslGt~~~~-~~l~~~~~~a~~~l~~~vi~--~~~~~~~~~~~~p~n~~v~~~~p~~~~l~~ad~vI~hGG 309 (406)
T COG1819 233 IPADRPIVYVSLGTVGNA-VELLAIVLEALADLDVRVIV--SLGGARDTLVNVPDNVIVADYVPQLELLPRADAVIHHGG 309 (406)
T ss_pred hcCCCCeEEEEcCCcccH-HHHHHHHHHHHhcCCcEEEE--eccccccccccCCCceEEecCCCHHHHhhhcCEEEecCC
Confidence 356788888778877642 34445566677666544322 2222 1 1111 1245678899988888776
Q ss_pred CCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccc
Q 011220 371 DSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVR 421 (490)
Q Consensus 371 ds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~ 421 (490)
.+- +.|||.+| ||+|+-.... .|+.+--=-++....+.++.+.+.
T Consensus 310 ~gt----t~eaL~~g-vP~vv~P~~~-DQ~~nA~rve~~G~G~~l~~~~l~ 354 (406)
T COG1819 310 AGT----TSEALYAG-VPLVVIPDGA-DQPLNAERVEELGAGIALPFEELT 354 (406)
T ss_pred cch----HHHHHHcC-CCEEEecCCc-chhHHHHHHHHcCCceecCcccCC
Confidence 543 57898888 7888765431 121000000244566666654443
No 80
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=28.53 E-value=2.7e+02 Score=28.31 Aligned_cols=88 Identities=10% Similarity=0.107 Sum_probs=47.3
Q ss_pred hhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCc--ccccccccCCCCCCceEEEEeccccccCcccHHHH
Q 011220 353 SAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRS--AYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAV 430 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~--~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~l~~i 430 (490)
.++.+.|..+..++...| ...++|||.+|+--|.+.... ...|....--..-....+.++.+++... .|.+.
T Consensus 244 ~~~~~~~~~~d~~i~~~g----~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~--~l~~~ 317 (357)
T PRK00726 244 DDMAAAYAAADLVICRAG----ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPE--KLAEK 317 (357)
T ss_pred hhHHHHHHhCCEEEECCC----HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHH--HHHHH
Confidence 367889999999998776 234899999997544443210 0000000000011345667776553111 33333
Q ss_pred HhcC--CHHHHHHHHHHH
Q 011220 431 LESY--SQEEVKRMRDKV 446 (490)
Q Consensus 431 L~~I--s~~~i~~Mr~~l 446 (490)
++.+ .++...+|+++.
T Consensus 318 i~~ll~~~~~~~~~~~~~ 335 (357)
T PRK00726 318 LLELLSDPERLEAMAEAA 335 (357)
T ss_pred HHHHHcCHHHHHHHHHHH
Confidence 3332 256677888874
No 81
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=26.54 E-value=3e+02 Score=28.37 Aligned_cols=37 Identities=16% Similarity=0.234 Sum_probs=29.7
Q ss_pred hhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeec
Q 011220 353 SAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWK 393 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd 393 (490)
..|.+.|+.+...++ .+||.+. +.||+.+| -||.+-+
T Consensus 220 nPy~~~La~ad~i~V-T~DSvSM--vsEA~~tG-~pV~v~~ 256 (311)
T PF06258_consen 220 NPYLGFLAAADAIVV-TEDSVSM--VSEAAATG-KPVYVLP 256 (311)
T ss_pred CcHHHHHHhCCEEEE-cCccHHH--HHHHHHcC-CCEEEec
Confidence 468888888887766 4788886 79999999 7888864
No 82
>PLN02316 synthase/transferase
Probab=21.87 E-value=82 Score=37.95 Aligned_cols=38 Identities=24% Similarity=0.149 Sum_probs=32.7
Q ss_pred HhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecC
Q 011220 357 ETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKR 394 (490)
Q Consensus 357 ~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~ 394 (490)
..++.|.+.+.|.=..+..-...+||.+||+||+-.-+
T Consensus 915 ~iyaaADiflmPS~~EP~GLvqLEAMa~GtppVvs~vG 952 (1036)
T PLN02316 915 LIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTG 952 (1036)
T ss_pred HHHHhCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCC
Confidence 67899999999987777778899999999999996543
No 83
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=20.43 E-value=1.2e+02 Score=28.84 Aligned_cols=40 Identities=20% Similarity=0.288 Sum_probs=29.8
Q ss_pred hhHHHhhccCeEEeccCCC-CCCchhHHHHHhhCceeEEeecC
Q 011220 353 SAILETFLDSVFCLQPRGD-SFTRRSIFDCMVAGSIPVFFWKR 394 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gd-s~ssrrl~DAi~aGCIPViisd~ 394 (490)
....+.++.+...+.|.-. +.+.. +.||+.+| +|||.++.
T Consensus 268 ~~~~~~~~~~~~~v~ps~~e~~~~~-~~Ea~a~g-~pvi~~~~ 308 (381)
T COG0438 268 EELAELLASADVFVLPSLSEGFGLV-LLEAMAAG-TPVIASDV 308 (381)
T ss_pred HHHHHHHHhCCEEEeccccccchHH-HHHHHhcC-CcEEECCC
Confidence 3556678888999998533 33322 89999999 99998875
No 84
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=20.30 E-value=6.7e+02 Score=25.69 Aligned_cols=35 Identities=23% Similarity=0.354 Sum_probs=25.0
Q ss_pred hHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeec
Q 011220 354 AILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWK 393 (490)
Q Consensus 354 ~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd 393 (490)
+..+.|+.|...+.-+| .-.+.|||.+|+ |||+.+
T Consensus 266 ~~~~l~~~aD~~v~~~g----g~t~~EA~a~g~-PvI~~~ 300 (380)
T PRK13609 266 NIDELFRVTSCMITKPG----GITLSEAAALGV-PVILYK 300 (380)
T ss_pred hHHHHHHhccEEEeCCC----chHHHHHHHhCC-CEEECC
Confidence 46688899987665444 234889999997 577764
No 85
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=20.10 E-value=1.6e+02 Score=34.38 Aligned_cols=86 Identities=12% Similarity=0.079 Sum_probs=51.8
Q ss_pred eEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCC--CCCceEEEEeccccccCcccHHHHHhc------C
Q 011220 363 VFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPD--EPGSYSVFIDRNEVRNGTKSIKAVLES------Y 434 (490)
Q Consensus 363 ~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPf--dw~~fSV~I~e~dv~~g~~~l~~iL~~------I 434 (490)
..+++|.=..+--.-+.|||.+||- ||.++.-- ++. ....-.+.|+..|.. .+-+.|.. -
T Consensus 645 dVfV~PS~~EpFGLvvLEAMAcGlP-VVAT~~GG-------~~EiV~dg~tGfLVdp~D~e----aLA~aL~~ll~kll~ 712 (784)
T TIGR02470 645 GIFVQPALYEAFGLTVLEAMTCGLP-TFATRFGG-------PLEIIQDGVSGFHIDPYHGE----EAAEKIVDFFEKCDE 712 (784)
T ss_pred cEEEECCcccCCCHHHHHHHHcCCC-EEEcCCCC-------HHHHhcCCCcEEEeCCCCHH----HHHHHHHHHHHHhcC
Confidence 4556666555555669999999985 45554311 111 223456667765554 44444332 1
Q ss_pred CHHHHHHHHHHH-hhhcceeEEecCCC
Q 011220 435 SQEEVKRMRDKV-IDYIPKFIYAKSRE 460 (490)
Q Consensus 435 s~~~i~~Mr~~l-~~v~~~f~Y~~p~~ 460 (490)
.++.+.+|.++. .++..+|.|.....
T Consensus 713 dp~~~~~ms~~a~~rV~~~FSW~~~A~ 739 (784)
T TIGR02470 713 DPSYWQKISQGGLQRIYEKYTWKIYSE 739 (784)
T ss_pred CHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 577888888885 45678888877543
Done!