Query 011220
Match_columns 490
No_of_seqs 250 out of 830
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 03:38:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011220.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011220hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qhp_A Type 1 capsular polysac 96.7 0.0033 1.1E-07 55.3 7.1 96 352-457 65-162 (166)
2 2bfw_A GLGA glycogen synthase; 94.2 0.061 2.1E-06 48.4 6.0 88 352-450 106-196 (200)
3 2gek_A Phosphatidylinositol ma 93.7 0.23 7.8E-06 49.4 9.5 92 353-455 274-369 (406)
4 3c48_A Predicted glycosyltrans 92.2 0.27 9.3E-06 49.7 7.7 93 353-455 317-411 (438)
5 3okp_A GDP-mannose-dependent a 92.1 0.11 3.6E-06 51.6 4.3 92 353-455 264-365 (394)
6 2nzw_A Alpha1,3-fucosyltransfe 92.1 0.42 1.4E-05 49.1 8.8 120 306-443 180-308 (371)
7 2jjm_A Glycosyl transferase, g 92.0 0.27 9.4E-06 49.0 7.3 93 353-455 276-371 (394)
8 2iw1_A Lipopolysaccharide core 90.1 0.22 7.7E-06 48.8 4.4 91 353-453 262-355 (374)
9 1f0k_A MURG, UDP-N-acetylgluco 89.5 0.2 6.9E-06 49.3 3.6 86 354-450 247-338 (364)
10 3rhz_A GTF3, nucleotide sugar 89.2 0.33 1.1E-05 49.0 4.9 92 352-457 224-324 (339)
11 2f9f_A First mannosyl transfer 88.6 0.16 5.3E-06 45.4 1.8 41 353-394 89-129 (177)
12 1rzu_A Glycogen synthase 1; gl 85.9 1.8 6.2E-05 44.3 8.3 85 354-447 358-455 (485)
13 2qzs_A Glycogen synthase; glyc 83.8 2.4 8.1E-05 43.5 8.0 85 354-447 359-456 (485)
14 2r60_A Glycosyl transferase, g 83.8 0.28 9.6E-06 50.9 0.9 95 353-457 346-447 (499)
15 3fro_A GLGA glycogen synthase; 83.8 0.54 1.8E-05 47.0 3.0 93 352-455 321-416 (439)
16 3oy2_A Glycosyltransferase B73 83.1 0.69 2.4E-05 46.3 3.5 96 353-457 265-378 (413)
17 2x6q_A Trehalose-synthase TRET 80.5 1.1 3.7E-05 45.0 3.8 91 353-455 307-400 (416)
18 3s2u_A UDP-N-acetylglucosamine 76.4 16 0.00054 36.4 11.1 89 354-449 245-338 (365)
19 2x0d_A WSAF; GT4 family, trans 72.7 2.8 9.6E-05 42.9 4.4 96 352-460 305-401 (413)
20 2iuy_A Avigt4, glycosyltransfe 60.1 7.3 0.00025 37.6 4.4 41 353-394 223-273 (342)
21 2vsy_A XCC0866; transferase, g 58.8 19 0.00063 37.6 7.5 37 353-391 445-481 (568)
22 3s28_A Sucrose synthase 1; gly 58.2 6.5 0.00022 44.3 4.0 95 354-458 656-758 (816)
23 3vue_A GBSS-I, granule-bound s 56.2 12 0.0004 39.8 5.5 98 354-458 394-500 (536)
24 1vgv_A UDP-N-acetylglucosamine 53.7 2.9 0.0001 41.1 0.2 36 353-394 274-309 (384)
25 2o6l_A UDP-glucuronosyltransfe 52.7 36 0.0012 29.2 7.3 87 356-452 79-167 (170)
26 1uqt_A Alpha, alpha-trehalose- 48.4 23 0.00077 37.1 6.1 91 352-452 342-437 (482)
27 3nb0_A Glycogen [starch] synth 45.6 19 0.00065 39.9 5.0 136 335-476 489-637 (725)
28 3otg_A CALG1; calicheamicin, T 31.8 2.6E+02 0.009 27.0 10.7 35 354-393 301-335 (412)
29 3beo_A UDP-N-acetylglucosamine 28.2 44 0.0015 32.2 4.1 36 353-394 274-309 (375)
30 3ia7_A CALG4; glycosysltransfe 24.5 2.9E+02 0.0098 26.5 9.3 34 355-393 291-324 (402)
31 3ot5_A UDP-N-acetylglucosamine 23.9 2.1E+02 0.0073 28.5 8.5 99 353-481 293-393 (403)
32 2hy7_A Glucuronosyltransferase 23.8 58 0.002 32.6 4.1 41 353-394 276-323 (406)
No 1
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=96.66 E-value=0.0033 Score=55.27 Aligned_cols=96 Identities=10% Similarity=0.205 Sum_probs=61.3
Q ss_pred hhhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccccCcccHHHHH
Q 011220 352 TSAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAVL 431 (490)
Q Consensus 352 ~~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~l~~iL 431 (490)
..++.+.|+.+..++.|.-.......+.|||.+||||||..++..... ++--+ ... .++..+.. ++.+.|
T Consensus 65 ~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~---~~~~~-~~~--~~~~~~~~----~l~~~i 134 (166)
T 3qhp_A 65 SNELLEILKTCTLYVHAANVESEAIACLEAISVGIVPVIANSPLSATR---QFALD-ERS--LFEPNNAK----DLSAKI 134 (166)
T ss_dssp HHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGG---GGCSS-GGG--EECTTCHH----HHHHHH
T ss_pred HHHHHHHHHhCCEEEECCcccCccHHHHHHHhcCCCcEEeeCCCCchh---hhccC-Cce--EEcCCCHH----HHHHHH
Confidence 467899999999999998555555679999999999999954321111 11112 233 44544444 344444
Q ss_pred hcC--CHHHHHHHHHHHhhhcceeEEec
Q 011220 432 ESY--SQEEVKRMRDKVIDYIPKFIYAK 457 (490)
Q Consensus 432 ~~I--s~~~i~~Mr~~l~~v~~~f~Y~~ 457 (490)
..+ .++...+|.++..+...+|.|..
T Consensus 135 ~~l~~~~~~~~~~~~~~~~~~~~~s~~~ 162 (166)
T 3qhp_A 135 DWWLENKLERERMQNEYAKSALNYTLEN 162 (166)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHCChhh
Confidence 333 67788899888877667776654
No 2
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=94.24 E-value=0.061 Score=48.39 Aligned_cols=88 Identities=8% Similarity=0.077 Sum_probs=58.7
Q ss_pred hhhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccccCcccHHHHH
Q 011220 352 TSAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAVL 431 (490)
Q Consensus 352 ~~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~l~~iL 431 (490)
..++.+.|+.+.+++.|.-.......++|||.+|| |||.++..... -.+ + ....+.++..+.. ++.+.|
T Consensus 106 ~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~-PvI~~~~~~~~---e~~--~-~~~g~~~~~~~~~----~l~~~i 174 (200)
T 2bfw_A 106 REFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGA-IPIASAVGGLR---DII--T-NETGILVKAGDPG----ELANAI 174 (200)
T ss_dssp HHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTC-EEEEESCHHHH---HHC--C-TTTCEEECTTCHH----HHHHHH
T ss_pred HHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCC-CEEEeCCCChH---HHc--C-CCceEEecCCCHH----HHHHHH
Confidence 35789999999999999866555677999999998 67777643211 112 2 2345556655544 444444
Q ss_pred hcC---CHHHHHHHHHHHhhhc
Q 011220 432 ESY---SQEEVKRMRDKVIDYI 450 (490)
Q Consensus 432 ~~I---s~~~i~~Mr~~l~~v~ 450 (490)
..+ .++++.+|.++..+..
T Consensus 175 ~~l~~~~~~~~~~~~~~a~~~~ 196 (200)
T 2bfw_A 175 LKALELSRSDLSKFRENCKKRA 196 (200)
T ss_dssp HHHHHCCHHHHHHHHHHHHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHHHH
Confidence 443 6788888888876544
No 3
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=93.67 E-value=0.23 Score=49.40 Aligned_cols=92 Identities=14% Similarity=0.237 Sum_probs=59.6
Q ss_pred hhHHHhhccCeEEeccC--CCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccccCcccHHHH
Q 011220 353 SAILETFLDSVFCLQPR--GDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAV 430 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~--Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~l~~i 430 (490)
.++.+.|+.|.+++.|. +++. ...++|||.+|| |||.++...... + + +-....+.++..+.. ++.+.
T Consensus 274 ~~~~~~~~~adv~v~ps~~~e~~-~~~~~Ea~a~G~-PvI~~~~~~~~e--~-i--~~~~~g~~~~~~d~~----~l~~~ 342 (406)
T 2gek_A 274 ATKASAMRSADVYCAPHLGGESF-GIVLVEAMAAGT-AVVASDLDAFRR--V-L--ADGDAGRLVPVDDAD----GMAAA 342 (406)
T ss_dssp HHHHHHHHHSSEEEECCCSCCSS-CHHHHHHHHHTC-EEEECCCHHHHH--H-H--TTTTSSEECCTTCHH----HHHHH
T ss_pred HHHHHHHHHCCEEEecCCCCCCC-chHHHHHHHcCC-CEEEecCCcHHH--H-h--cCCCceEEeCCCCHH----HHHHH
Confidence 45689999999999995 4444 456999999998 788887532111 0 1 222345566655554 45555
Q ss_pred HhcC--CHHHHHHHHHHHhhhcceeEE
Q 011220 431 LESY--SQEEVKRMRDKVIDYIPKFIY 455 (490)
Q Consensus 431 L~~I--s~~~i~~Mr~~l~~v~~~f~Y 455 (490)
|..+ .++...+|.++..+....|-|
T Consensus 343 i~~l~~~~~~~~~~~~~~~~~~~~~s~ 369 (406)
T 2gek_A 343 LIGILEDDQLRAGYVARASERVHRYDW 369 (406)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHGGGGBH
T ss_pred HHHHHcCHHHHHHHHHHHHHHHHhCCH
Confidence 4443 577788888887766655544
No 4
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=92.22 E-value=0.27 Score=49.66 Aligned_cols=93 Identities=13% Similarity=0.211 Sum_probs=61.0
Q ss_pred hhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccccCcccHHHHHh
Q 011220 353 SAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAVLE 432 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~l~~iL~ 432 (490)
.++.+.|+.+..++.|.-.......++|||.+|| |||.++...... .+ +-....+.++..+.. ++.+.|.
T Consensus 317 ~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~-PvI~~~~~~~~e---~i--~~~~~g~~~~~~d~~----~la~~i~ 386 (438)
T 3c48_A 317 SELVAVYRAADIVAVPSFNESFGLVAMEAQASGT-PVIAARVGGLPI---AV--AEGETGLLVDGHSPH----AWADALA 386 (438)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTC-CEEEESCTTHHH---HS--CBTTTEEEESSCCHH----HHHHHHH
T ss_pred HHHHHHHHhCCEEEECccccCCchHHHHHHHcCC-CEEecCCCChhH---Hh--hCCCcEEECCCCCHH----HHHHHHH
Confidence 4778999999999999866555667999999999 788887532111 11 223345666655554 4444444
Q ss_pred cC--CHHHHHHHHHHHhhhcceeEE
Q 011220 433 SY--SQEEVKRMRDKVIDYIPKFIY 455 (490)
Q Consensus 433 ~I--s~~~i~~Mr~~l~~v~~~f~Y 455 (490)
.+ .++...+|.++..+....|.|
T Consensus 387 ~l~~~~~~~~~~~~~~~~~~~~~s~ 411 (438)
T 3c48_A 387 TLLDDDETRIRMGEDAVEHARTFSW 411 (438)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCHHHHHHHHHHHHHHHHhCCH
Confidence 33 567778888877665554444
No 5
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=92.08 E-value=0.11 Score=51.55 Aligned_cols=92 Identities=10% Similarity=0.140 Sum_probs=60.6
Q ss_pred hhHHHhhccCeEEeccCCC-------CCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccccCcc
Q 011220 353 SAILETFLDSVFCLQPRGD-------SFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTK 425 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gd-------s~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~ 425 (490)
.++.+.|+.+.+++.|.-. ......+.|||.+|| |||.++...... .+ +-. -.+.++..+..
T Consensus 264 ~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~-PvI~~~~~~~~e---~i--~~~-~g~~~~~~d~~---- 332 (394)
T 3okp_A 264 QDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGV-PVIAGTSGGAPE---TV--TPA-TGLVVEGSDVD---- 332 (394)
T ss_dssp HHHHHHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTTC-CEEECSSTTGGG---GC--CTT-TEEECCTTCHH----
T ss_pred HHHHHHHHhCCEEEecCccccccccccccCcHHHHHHHcCC-CEEEeCCCChHH---HH--hcC-CceEeCCCCHH----
Confidence 5788999999999999765 555567999999995 888887532111 11 222 56666665554
Q ss_pred cHHHHHhcC--CHHHHHHHHHHHhhhc-ceeEE
Q 011220 426 SIKAVLESY--SQEEVKRMRDKVIDYI-PKFIY 455 (490)
Q Consensus 426 ~l~~iL~~I--s~~~i~~Mr~~l~~v~-~~f~Y 455 (490)
++.+.|..+ .++...+|.++..+.. .+|-|
T Consensus 333 ~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~ 365 (394)
T 3okp_A 333 KLSELLIELLDDPIRRAAMGAAGRAHVEAEWSW 365 (394)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTBH
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCH
Confidence 444444443 6778888888866543 34544
No 6
>2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} SCOP: c.87.1.11 PDB: 2nzx_A* 2nzy_A*
Probab=92.07 E-value=0.42 Score=49.05 Aligned_cols=120 Identities=14% Similarity=0.135 Sum_probs=71.7
Q ss_pred CceeeeecccccCCchhHHHHHHhhhhcCCCCeEEEecCCCcccC----ChhhHHHhhccCeEEeccC---CCCCCchhH
Q 011220 306 RSSLYCFAGATRMVKNDFRSMLLSHCKNESGSCRVVDCEGTRCMN----GTSAILETFLDSVFCLQPR---GDSFTRRSI 378 (490)
Q Consensus 306 R~~L~~FaG~~~~~~~~iR~~L~~~~~~~~~~~~~~~c~~~~c~~----~~~~y~~~m~~S~FCL~P~---Gds~ssrrl 378 (490)
++..++++.+... ..|..+++++...- .+... +.|.+ ......+.+++-+|.|+.- .....+--|
T Consensus 180 ~k~v~wvvSnc~~---~~R~~~~~~L~k~i-~Vd~~----G~c~~~~~~~~~~~~~~l~~YKFyLafENs~c~dYvTEK~ 251 (371)
T 2nzw_A 180 RGFASFVASNPNA---PIRNAFYDALNSIE-PVTGG----GSVRNTLGYNVKNKNEFLSQYKFNLCFENTQGYGYVTEKI 251 (371)
T ss_dssp SEEEEECCSCCCC---HHHHHHHHHHTTTS-CCEEC----SSTTCCSSSCCSCHHHHHTTEEEEEEECSSCCTTCCCTHH
T ss_pred ceEEEEEEeCCCc---HHHHHHHHHHhCcC-CEeeC----CCccCCCCCccccHHHHHhcCcEEEEEeccCCCCcccHHH
Confidence 3444444555433 47888888887543 22222 23421 1245678899999999753 456666779
Q ss_pred HHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccccCcccHHHHHhcCC--HHHHHHHH
Q 011220 379 FDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAVLESYS--QEEVKRMR 443 (490)
Q Consensus 379 ~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~l~~iL~~Is--~~~i~~Mr 443 (490)
|+|+.+|||||+++... +.+ .+|- .+ +|..+|..+-. +|.+.|+.+. ++.+.++-
T Consensus 252 ~~al~~g~VPI~~G~~~-~~~---~~Pp--~S---fI~~~dF~s~~-~La~yL~~L~~n~~~Y~~y~ 308 (371)
T 2nzw_A 252 IDAYFSHTIPIYWGSPS-VAK---DFNP--KS---FVNVHDFKNFD-EAIDYIKYLHTHKNAYLDML 308 (371)
T ss_dssp HHHHHTTCEEEEESCTT-GGG---TSCG--GG---SEEGGGSSSHH-HHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHhCCeEEEEECCCc-hhh---hCCC--Cc---eEEcccCCCHH-HHHHHHHHHhcCHHHHHHHH
Confidence 99999999999999763 333 2442 12 34444444211 5667776664 45555443
No 7
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=92.00 E-value=0.27 Score=49.04 Aligned_cols=93 Identities=11% Similarity=0.117 Sum_probs=59.8
Q ss_pred hhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccccCcccHHHHHh
Q 011220 353 SAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAVLE 432 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~l~~iL~ 432 (490)
.++.+.|+.+.+++.|.-.......++|||.+| +|||.++..... ++ .+-....+.++..+.. ++.+.|.
T Consensus 276 ~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G-~PvI~~~~~~~~----e~-v~~~~~g~~~~~~d~~----~la~~i~ 345 (394)
T 2jjm_A 276 DNVAELLAMSDLMLLLSEKESFGLVLLEAMACG-VPCIGTRVGGIP----EV-IQHGDTGYLCEVGDTT----GVADQAI 345 (394)
T ss_dssp SCTHHHHHTCSEEEECCSCCSCCHHHHHHHHTT-CCEEEECCTTST----TT-CCBTTTEEEECTTCHH----HHHHHHH
T ss_pred hhHHHHHHhCCEEEeccccCCCchHHHHHHhcC-CCEEEecCCChH----HH-hhcCCceEEeCCCCHH----HHHHHHH
Confidence 356788999999999875555556799999999 578887743211 01 1223456667665554 4444444
Q ss_pred cC--CHHHHHHHHHHHhhhc-ceeEE
Q 011220 433 SY--SQEEVKRMRDKVIDYI-PKFIY 455 (490)
Q Consensus 433 ~I--s~~~i~~Mr~~l~~v~-~~f~Y 455 (490)
.+ .++...+|.++..+.. ..|-|
T Consensus 346 ~l~~~~~~~~~~~~~~~~~~~~~~s~ 371 (394)
T 2jjm_A 346 QLLKDEELHRNMGERARESVYEQFRS 371 (394)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHSCH
T ss_pred HHHcCHHHHHHHHHHHHHHHHHhCCH
Confidence 33 5677888888876654 55544
No 8
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=90.10 E-value=0.22 Score=48.85 Aligned_cols=91 Identities=13% Similarity=0.182 Sum_probs=59.4
Q ss_pred hhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEe-ccccccCcccHHHHH
Q 011220 353 SAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFID-RNEVRNGTKSIKAVL 431 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~-e~dv~~g~~~l~~iL 431 (490)
.+..+.|+.|.+++.|.-.......++|||.+|| |||.++...... .+ .-....+.++ ..+.. ++.+.|
T Consensus 262 ~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G~-Pvi~~~~~~~~e---~i--~~~~~g~~~~~~~~~~----~l~~~i 331 (374)
T 2iw1_A 262 NDVSELMAAADLLLHPAYQEAAGIVLLEAITAGL-PVLTTAVCGYAH---YI--ADANCGTVIAEPFSQE----QLNEVL 331 (374)
T ss_dssp SCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTC-CEEEETTSTTTH---HH--HHHTCEEEECSSCCHH----HHHHHH
T ss_pred ccHHHHHHhcCEEEeccccCCcccHHHHHHHCCC-CEEEecCCCchh---hh--ccCCceEEeCCCCCHH----HHHHHH
Confidence 4678899999999999765555667999999999 888887421100 00 1123456665 44444 444444
Q ss_pred hcC--CHHHHHHHHHHHhhhccee
Q 011220 432 ESY--SQEEVKRMRDKVIDYIPKF 453 (490)
Q Consensus 432 ~~I--s~~~i~~Mr~~l~~v~~~f 453 (490)
..+ .++...+|.++..+....+
T Consensus 332 ~~l~~~~~~~~~~~~~~~~~~~~~ 355 (374)
T 2iw1_A 332 RKALTQSPLRMAWAENARHYADTQ 355 (374)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHcChHHHHHHHHHHHHHHHHh
Confidence 433 5778888988877766554
No 9
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=89.54 E-value=0.2 Score=49.25 Aligned_cols=86 Identities=16% Similarity=0.215 Sum_probs=56.9
Q ss_pred hHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcc--ccccc--ccCCCCCCceEEEEeccc--cccCcccH
Q 011220 354 AILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSA--YFQYA--WFLPDEPGSYSVFIDRNE--VRNGTKSI 427 (490)
Q Consensus 354 ~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~--y~~y~--~~LPfdw~~fSV~I~e~d--v~~g~~~l 427 (490)
+..+.|+.+..++.|.| ...+.|||.+|+ |||.++... ..|+. -.+- +- ...+.++..| .. .+
T Consensus 247 ~~~~~~~~ad~~v~~sg----~~~~~EAma~G~-Pvi~~~~~g~~~~q~~~~~~~~-~~-g~g~~~~~~d~~~~----~l 315 (364)
T 1f0k_A 247 DMAAAYAWADVVVCRSG----ALTVSEIAAAGL-PALFVPFQHKDRQQYWNALPLE-KA-GAAKIIEQPQLSVD----AV 315 (364)
T ss_dssp CHHHHHHHCSEEEECCC----HHHHHHHHHHTC-CEEECCCCCTTCHHHHHHHHHH-HT-TSEEECCGGGCCHH----HH
T ss_pred hHHHHHHhCCEEEECCc----hHHHHHHHHhCC-CEEEeeCCCCchhHHHHHHHHH-hC-CcEEEeccccCCHH----HH
Confidence 67788999999999987 456899999997 888887421 00000 0010 11 2367777766 44 67
Q ss_pred HHHHhcCCHHHHHHHHHHHhhhc
Q 011220 428 KAVLESYSQEEVKRMRDKVIDYI 450 (490)
Q Consensus 428 ~~iL~~Is~~~i~~Mr~~l~~v~ 450 (490)
.+.|..+.++...+|.++..+..
T Consensus 316 a~~i~~l~~~~~~~~~~~~~~~~ 338 (364)
T 1f0k_A 316 ANTLAGWSRETLLTMAERARAAS 338 (364)
T ss_dssp HHHHHTCCHHHHHHHHHHHHHTC
T ss_pred HHHHHhcCHHHHHHHHHHHHHhh
Confidence 77777776677788888765543
No 10
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=89.20 E-value=0.33 Score=48.98 Aligned_cols=92 Identities=15% Similarity=0.183 Sum_probs=62.4
Q ss_pred hhhHHHhhccCeEEeccCCCC-------CCchhHHHHHhhCceeEEeecCcccccccccCCC--CCCceEEEEecccccc
Q 011220 352 TSAILETFLDSVFCLQPRGDS-------FTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPD--EPGSYSVFIDRNEVRN 422 (490)
Q Consensus 352 ~~~y~~~m~~S~FCL~P~Gds-------~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPf--dw~~fSV~I~e~dv~~ 422 (490)
..++.+.|+++.|+|+..-.. -..-.++|+|.+|+ |||.++... ++- +-....+.++ ++.
T Consensus 224 ~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~-PVI~~~~~~-------~~~~v~~~~~G~~~~--~~~- 292 (339)
T 3rhz_A 224 DEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGI-PVIVQEGIA-------NQELIENNGLGWIVK--DVE- 292 (339)
T ss_dssp HHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTC-CEEEETTCT-------TTHHHHHHTCEEEES--SHH-
T ss_pred HHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCC-CEEEccChh-------HHHHHHhCCeEEEeC--CHH-
Confidence 356777888899999971110 11345999999996 999987642 211 1123344443 344
Q ss_pred CcccHHHHHhcCCHHHHHHHHHHHhhhcceeEEec
Q 011220 423 GTKSIKAVLESYSQEEVKRMRDKVIDYIPKFIYAK 457 (490)
Q Consensus 423 g~~~l~~iL~~Is~~~i~~Mr~~l~~v~~~f~Y~~ 457 (490)
++.+.|..++++++.+|+++..+....+..+.
T Consensus 293 ---e~~~~i~~l~~~~~~~m~~na~~~a~~~~~~~ 324 (339)
T 3rhz_A 293 ---EAIMKVKNVNEDEYIELVKNVRSFNPILRKGF 324 (339)
T ss_dssp ---HHHHHHHHCCHHHHHHHHHHHHHHTHHHHTTH
T ss_pred ---HHHHHHHHhCHHHHHHHHHHHHHHHHHhhccH
Confidence 68888888999999999999988877765433
No 11
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=88.65 E-value=0.16 Score=45.37 Aligned_cols=41 Identities=15% Similarity=0.166 Sum_probs=32.4
Q ss_pred hhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecC
Q 011220 353 SAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKR 394 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~ 394 (490)
.++.+.|+.+.+++.|.-.......++|||.+|| |||.++.
T Consensus 89 ~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G~-PvI~~~~ 129 (177)
T 2f9f_A 89 EELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGK-PVIAVNE 129 (177)
T ss_dssp HHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTC-CEEEESS
T ss_pred HHHHHHHHhCCEEEeCCCcCCCChHHHHHHHcCC-cEEEeCC
Confidence 4688999999999997643334456999999998 7888775
No 12
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=85.92 E-value=1.8 Score=44.35 Aligned_cols=85 Identities=6% Similarity=-0.070 Sum_probs=53.0
Q ss_pred hHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCC--------ceEEEEeccccccCcc
Q 011220 354 AILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPG--------SYSVFIDRNEVRNGTK 425 (490)
Q Consensus 354 ~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~--------~fSV~I~e~dv~~g~~ 425 (490)
...+.|+.+..++.|.-.......+.|||.+|| |||.++..... +. + -|.. ...+.++..+..
T Consensus 358 ~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~-PvI~s~~gg~~--e~-v-~~~~~~~~~~~~~~G~l~~~~d~~---- 428 (485)
T 1rzu_A 358 LSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGC-IPVVARTGGLA--DT-V-IDANHAALASKAATGVQFSPVTLD---- 428 (485)
T ss_dssp HHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTC-EEEEESSHHHH--HH-C-CBCCHHHHHTTCCCBEEESSCSHH----
T ss_pred HHHHHHhcCCEEEECcccCCCCHHHHHHHHCCC-CEEEeCCCChh--he-e-cccccccccccCCcceEeCCCCHH----
Confidence 446889999999999765555567999999997 67777642110 01 1 1210 345666665554
Q ss_pred cHHHHHhcC-----CHHHHHHHHHHHh
Q 011220 426 SIKAVLESY-----SQEEVKRMRDKVI 447 (490)
Q Consensus 426 ~l~~iL~~I-----s~~~i~~Mr~~l~ 447 (490)
++.+.|..+ .++...+|.++..
T Consensus 429 ~la~~i~~ll~~~~~~~~~~~~~~~~~ 455 (485)
T 1rzu_A 429 GLKQAIRRTVRYYHDPKLWTQMQKLGM 455 (485)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 444444432 5677788887764
No 13
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=83.80 E-value=2.4 Score=43.45 Aligned_cols=85 Identities=5% Similarity=-0.040 Sum_probs=52.8
Q ss_pred hHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCC--------CceEEEEeccccccCcc
Q 011220 354 AILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEP--------GSYSVFIDRNEVRNGTK 425 (490)
Q Consensus 354 ~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw--------~~fSV~I~e~dv~~g~~ 425 (490)
...+.|+.+..++.|.-.......+.|||.+|| |||.++..... +. + -+. ....+.++..+..
T Consensus 359 ~~~~~~~~adv~v~pS~~E~~g~~~lEAma~G~-PvI~s~~gg~~--e~-v-~~~~~~~~~~~~~~G~l~~~~d~~---- 429 (485)
T 2qzs_A 359 FSHRIMGGADVILVPSRFEPCGLTQLYGLKYGT-LPLVRRTGGLA--DT-V-SDCSLENLADGVASGFVFEDSNAW---- 429 (485)
T ss_dssp HHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTC-EEEEESSHHHH--HH-C-CBCCHHHHHTTCCCBEEECSSSHH----
T ss_pred HHHHHHHhCCEEEECCccCCCcHHHHHHHHCCC-CEEECCCCCcc--ce-e-ccCccccccccccceEEECCCCHH----
Confidence 457889999999999765555567999999997 66777642110 01 1 111 0345666665554
Q ss_pred cHHHHHhcC-----CHHHHHHHHHHHh
Q 011220 426 SIKAVLESY-----SQEEVKRMRDKVI 447 (490)
Q Consensus 426 ~l~~iL~~I-----s~~~i~~Mr~~l~ 447 (490)
++.+.|..+ .++...+|.++..
T Consensus 430 ~la~~i~~ll~~~~~~~~~~~~~~~~~ 456 (485)
T 2qzs_A 430 SLLRAIRRAFVLWSRPSLWRFVQRQAM 456 (485)
T ss_dssp HHHHHHHHHHHHHTSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 444444432 5677778877764
No 14
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=83.78 E-value=0.28 Score=50.89 Aligned_cols=95 Identities=14% Similarity=0.175 Sum_probs=58.1
Q ss_pred hhHHHhhccC----eEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccccCcccHH
Q 011220 353 SAILETFLDS----VFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIK 428 (490)
Q Consensus 353 ~~y~~~m~~S----~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~l~ 428 (490)
.+..+.|+.+ ..++.|.-.......+.|||.+|| |||.++...... .+ +-..-.+.++..+.. ++.
T Consensus 346 ~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~-PvI~s~~~g~~e---~v--~~~~~g~l~~~~d~~----~la 415 (499)
T 2r60_A 346 QELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGL-PAVVTRNGGPAE---IL--DGGKYGVLVDPEDPE----DIA 415 (499)
T ss_dssp HHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTC-CEEEESSBHHHH---HT--GGGTSSEEECTTCHH----HHH
T ss_pred HHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCC-CEEEecCCCHHH---Hh--cCCceEEEeCCCCHH----HHH
Confidence 5788899999 888888644444456999999998 788887422110 11 112235566655554 444
Q ss_pred HHHhcC--CHHHHHHHHHHHhhhcc-eeEEec
Q 011220 429 AVLESY--SQEEVKRMRDKVIDYIP-KFIYAK 457 (490)
Q Consensus 429 ~iL~~I--s~~~i~~Mr~~l~~v~~-~f~Y~~ 457 (490)
+.|..+ .++...+|.++..+... +|-|..
T Consensus 416 ~~i~~ll~~~~~~~~~~~~a~~~~~~~fs~~~ 447 (499)
T 2r60_A 416 RGLLKAFESEETWSAYQEKGKQRVEERYTWQE 447 (499)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHHHHHHHSBHHH
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHH
Confidence 444332 56777888877655443 365544
No 15
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=83.77 E-value=0.54 Score=47.00 Aligned_cols=93 Identities=9% Similarity=0.093 Sum_probs=60.1
Q ss_pred hhhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccccCcccHHHHH
Q 011220 352 TSAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAVL 431 (490)
Q Consensus 352 ~~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~l~~iL 431 (490)
..++.+.|+.|..++.|.-.......++|||.+|| |||.++..... -.+ +- ...+.++..+.. ++.+.|
T Consensus 321 ~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~-Pvi~s~~~~~~---e~~--~~-~~g~~~~~~d~~----~la~~i 389 (439)
T 3fro_A 321 REFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGA-IPIASAVGGLR---DII--TN-ETGILVKAGDPG----ELANAI 389 (439)
T ss_dssp HHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTTC-EEEEESSTHHH---HHC--CT-TTCEEECTTCHH----HHHHHH
T ss_pred HHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCCC-CeEEcCCCCcc---eeE--Ec-CceEEeCCCCHH----HHHHHH
Confidence 35678899999999999876666677999999995 78887743211 011 11 255666665554 444444
Q ss_pred hcC---CHHHHHHHHHHHhhhcceeEE
Q 011220 432 ESY---SQEEVKRMRDKVIDYIPKFIY 455 (490)
Q Consensus 432 ~~I---s~~~i~~Mr~~l~~v~~~f~Y 455 (490)
..+ .++...+|.++..+...+|-|
T Consensus 390 ~~ll~~~~~~~~~~~~~~~~~~~~~s~ 416 (439)
T 3fro_A 390 LKALELSRSDLSKFRENCKKRAMSFSW 416 (439)
T ss_dssp HHHHHHTTTTTHHHHHHHHHHHHTSCH
T ss_pred HHHHhcCHHHHHHHHHHHHHHHhhCcH
Confidence 432 356677888877665555544
No 16
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=83.06 E-value=0.69 Score=46.29 Aligned_cols=96 Identities=8% Similarity=0.083 Sum_probs=58.5
Q ss_pred hhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCc--------------eEE--EEe
Q 011220 353 SAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGS--------------YSV--FID 416 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~--------------fSV--~I~ 416 (490)
.+..+.|+.|..++.|.-.......+.|||.+|| |||.++...... .+. +... ..+ .++
T Consensus 265 ~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~-PvI~s~~~g~~e---~v~-~~~~~~i~~~~~~~~~~~~G~~gl~~ 339 (413)
T 3oy2_A 265 ERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGK-PLIISAVGGADD---YFS-GDCVYKIKPSAWISVDDRDGIGGIEG 339 (413)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTC-CEEEECCHHHHH---HSC-TTTSEEECCCEEEECTTTCSSCCEEE
T ss_pred HHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCC-CEEEcCCCChHH---HHc-cCcccccccccccccccccCcceeeC
Confidence 4688899999999999765555567999999996 888887532100 010 1111 133 444
Q ss_pred ccccccCcccHHHHHhcC-CHHHHHHHHHHHhhhc-ceeEEec
Q 011220 417 RNEVRNGTKSIKAVLESY-SQEEVKRMRDKVIDYI-PKFIYAK 457 (490)
Q Consensus 417 e~dv~~g~~~l~~iL~~I-s~~~i~~Mr~~l~~v~-~~f~Y~~ 457 (490)
..+.. ++.+.|+-+ .++...+|.++..+.. .+|.|..
T Consensus 340 ~~d~~----~la~~i~l~~~~~~~~~~~~~a~~~~~~~fs~~~ 378 (413)
T 3oy2_A 340 IIDVD----DLVEAFTFFKDEKNRKEYGKRVQDFVKTKPTWDD 378 (413)
T ss_dssp ECCHH----HHHHHHHHTTSHHHHHHHHHHHHHHHTTSCCHHH
T ss_pred CCCHH----HHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCHHH
Confidence 44444 444444212 4677788888876653 5665543
No 17
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=80.46 E-value=1.1 Score=44.96 Aligned_cols=91 Identities=16% Similarity=0.084 Sum_probs=55.2
Q ss_pred hhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccccCcccHHHHHh
Q 011220 353 SAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAVLE 432 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~l~~iL~ 432 (490)
.+..+.|+.+..++.|.-.......+.|||.+|| |||.++...... .+ +-....+.++ +.. ++.+.|.
T Consensus 307 ~~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~G~-PvI~~~~~g~~e---~i--~~~~~g~l~~--d~~----~la~~i~ 374 (416)
T 2x6q_A 307 REVNAFQRASDVILQMSIREGFGLTVTEAMWKGK-PVIGRAVGGIKF---QI--VDGETGFLVR--DAN----EAVEVVL 374 (416)
T ss_dssp HHHHHHHHHCSEEEECCSSCSSCHHHHHHHHTTC-CEEEESCHHHHH---HC--CBTTTEEEES--SHH----HHHHHHH
T ss_pred HHHHHHHHhCCEEEECCCcCCCccHHHHHHHcCC-CEEEccCCCChh---he--ecCCCeEEEC--CHH----HHHHHHH
Confidence 4678889999999988754545567999999998 788887421100 01 1123444554 333 3334333
Q ss_pred cC--CHHHHHHHHHHHhhhc-ceeEE
Q 011220 433 SY--SQEEVKRMRDKVIDYI-PKFIY 455 (490)
Q Consensus 433 ~I--s~~~i~~Mr~~l~~v~-~~f~Y 455 (490)
.+ .++...+|.++..+.. .+|.|
T Consensus 375 ~ll~~~~~~~~~~~~a~~~~~~~fs~ 400 (416)
T 2x6q_A 375 YLLKHPEVSKEMGAKAKERVRKNFII 400 (416)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHTBH
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHcCH
Confidence 32 5677888888765543 34544
No 18
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=76.40 E-value=16 Score=36.39 Aligned_cols=89 Identities=12% Similarity=0.102 Sum_probs=53.7
Q ss_pred hHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcc---cccccccCCCCCCceEEEEeccccccCcccHHHH
Q 011220 354 AILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSA---YFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAV 430 (490)
Q Consensus 354 ~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~---y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~l~~i 430 (490)
+..+.|+.+..+++-.| .-.+.|++.+|. |+|+-+-.. -.|+.=---+.-...++.|+++++... .|.+.
T Consensus 245 dm~~~l~~aDlvI~raG----~~Tv~E~~a~G~-P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~~~~~--~L~~~ 317 (365)
T 3s2u_A 245 DMAAAYAWADLVICRAG----ALTVSELTAAGL-PAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAA--ELAAQ 317 (365)
T ss_dssp CHHHHHHHCSEEEECCC----HHHHHHHHHHTC-CEEECC-----CCHHHHHHHHHHTTTSEEECCTTTCCHH--HHHHH
T ss_pred hhhhhhccceEEEecCC----cchHHHHHHhCC-CeEEeccCCCCCcHHHHHHHHHHHCCCEEEeecCCCCHH--HHHHH
Confidence 56788999999998776 235889999996 888754100 000000000013457888988776422 23333
Q ss_pred HhcC--CHHHHHHHHHHHhhh
Q 011220 431 LESY--SQEEVKRMRDKVIDY 449 (490)
Q Consensus 431 L~~I--s~~~i~~Mr~~l~~v 449 (490)
|..+ .++++.+|.++..++
T Consensus 318 i~~ll~d~~~~~~m~~~a~~~ 338 (365)
T 3s2u_A 318 LSEVLMHPETLRSMADQARSL 338 (365)
T ss_dssp HHHHHHCTHHHHHHHHHHHHT
T ss_pred HHHHHCCHHHHHHHHHHHHhc
Confidence 3332 467889999987654
No 19
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=72.69 E-value=2.8 Score=42.87 Aligned_cols=96 Identities=11% Similarity=-0.054 Sum_probs=51.8
Q ss_pred hhhHHHhhccCeEEeccCC-CCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccccCcccHHHH
Q 011220 352 TSAILETFLDSVFCLQPRG-DSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAV 430 (490)
Q Consensus 352 ~~~y~~~m~~S~FCL~P~G-ds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~l~~i 430 (490)
..+..+.++.+..++.|.= .+++ .-+.|||.+|| |||..+... .++- +-..-.+.++..|.. .+-+.
T Consensus 305 ~~~l~~~~~~adv~v~pS~~E~~g-~~~lEAmA~G~-PVV~~~~g~-----~e~v-~~~~~G~lv~~~d~~----~la~a 372 (413)
T 2x0d_A 305 LEDYADLLKRSSIGISLMISPHPS-YPPLEMAHFGL-RVITNKYEN-----KDLS-NWHSNIVSLEQLNPE----NIAET 372 (413)
T ss_dssp HHHHHHHHHHCCEEECCCSSSSCC-SHHHHHHHTTC-EEEEECBTT-----BCGG-GTBTTEEEESSCSHH----HHHHH
T ss_pred HHHHHHHHHhCCEEEEecCCCCCC-cHHHHHHhCCC-cEEEeCCCc-----chhh-hcCCCEEEeCCCCHH----HHHHH
Confidence 3578899999999999863 3443 34899999998 666654321 1111 223446677766655 45444
Q ss_pred HhcCCHHHHHHHHHHHhhhcceeEEecCCC
Q 011220 431 LESYSQEEVKRMRDKVIDYIPKFIYAKSRE 460 (490)
Q Consensus 431 L~~Is~~~i~~Mr~~l~~v~~~f~Y~~p~~ 460 (490)
|..+-+..-.+.+ +..+....|.|.....
T Consensus 373 i~~ll~~~~~~~~-~~~~~~~~~~W~~~~~ 401 (413)
T 2x0d_A 373 LVELCMSFNNRDV-DKKESSNMMFYINEFN 401 (413)
T ss_dssp HHHHHHHTC--------CCBSCGGGCCCC-
T ss_pred HHHHHcCHHHHHH-hHHHHHHhCCHHHHHH
Confidence 4433221111111 3333445677766543
No 20
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=60.12 E-value=7.3 Score=37.58 Aligned_cols=41 Identities=15% Similarity=0.069 Sum_probs=32.9
Q ss_pred hhHHHhhccCeEEeccCC----------CCCCchhHHHHHhhCceeEEeecC
Q 011220 353 SAILETFLDSVFCLQPRG----------DSFTRRSIFDCMVAGSIPVFFWKR 394 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~G----------ds~ssrrl~DAi~aGCIPViisd~ 394 (490)
.++.+.|+.+..++.|.- .......+.|||.+|| |||.++.
T Consensus 223 ~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~-PvI~s~~ 273 (342)
T 2iuy_A 223 ERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGT-PVVGTGN 273 (342)
T ss_dssp HHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTC-CEEECCT
T ss_pred HHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCC-CEEEcCC
Confidence 466889999999999876 3444567999999997 8888874
No 21
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=58.81 E-value=19 Score=37.55 Aligned_cols=37 Identities=16% Similarity=0.276 Sum_probs=30.6
Q ss_pred hhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEe
Q 011220 353 SAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFF 391 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPVii 391 (490)
.++.+.|+.+..++.|.-.+ ....+.|||.+|| |||.
T Consensus 445 ~~~~~~~~~adv~v~ps~~~-~g~~~lEAma~G~-Pvv~ 481 (568)
T 2vsy_A 445 PQYLARYRHADLFLDTHPYN-AHTTASDALWTGC-PVLT 481 (568)
T ss_dssp HHHHHHGGGCSEEECCSSSC-CSHHHHHHHHTTC-CEEB
T ss_pred HHHHHHHhcCCEEeeCCCCC-CcHHHHHHHhCCC-CEEe
Confidence 47888999999999887663 3456999999996 9999
No 22
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=58.21 E-value=6.5 Score=44.29 Aligned_cols=95 Identities=13% Similarity=0.103 Sum_probs=55.9
Q ss_pred hHHHhhc-cCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccccCcccHHHHHh
Q 011220 354 AILETFL-DSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAVLE 432 (490)
Q Consensus 354 ~y~~~m~-~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~l~~iL~ 432 (490)
+..+.++ .+..++.|.=.....-.+.|||.+|| |||.++..... -.+ .-..-.+.++..|.. .+.+.|.
T Consensus 656 eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~-PVIasd~GG~~---EiV--~dg~~Gllv~p~D~e----~LA~aI~ 725 (816)
T 3s28_A 656 ELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL-PTFATCKGGPA---EII--VHGKSGFHIDPYHGD----QAADTLA 725 (816)
T ss_dssp HHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTC-CEEEESSBTHH---HHC--CBTTTBEEECTTSHH----HHHHHHH
T ss_pred HHHHHHHhcCeEEEECCCccCccHHHHHHHHcCC-CEEEeCCCChH---HHH--ccCCcEEEeCCCCHH----HHHHHHH
Confidence 4556666 45566667644444566999999997 78888642110 011 223345677765554 3444332
Q ss_pred c------CCHHHHHHHHHHHhhhc-ceeEEecC
Q 011220 433 S------YSQEEVKRMRDKVIDYI-PKFIYAKS 458 (490)
Q Consensus 433 ~------Is~~~i~~Mr~~l~~v~-~~f~Y~~p 458 (490)
. -.++...+|.++..+.. .+|-|..-
T Consensus 726 ~lL~~Ll~d~~~~~~m~~~ar~~a~~~fSwe~~ 758 (816)
T 3s28_A 726 DFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIY 758 (816)
T ss_dssp HHHHHHHHCTHHHHHHHHHHHHHHHHSCCHHHH
T ss_pred HHHHHhccCHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 1 14677888888876654 67766543
No 23
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=56.16 E-value=12 Score=39.78 Aligned_cols=98 Identities=7% Similarity=0.024 Sum_probs=53.3
Q ss_pred hHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCCC-CCceE--------EEEeccccccCc
Q 011220 354 AILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDE-PGSYS--------VFIDRNEVRNGT 424 (490)
Q Consensus 354 ~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfd-w~~fS--------V~I~e~dv~~g~ 424 (490)
...+.++.|.+.+.|.=..+....+.|||.+||.+| .++...- + +... | -+-|. ..++..|...-.
T Consensus 394 ~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G~PvI-~s~~gG~-~-e~V~--dg~~G~~~~~~~~~g~l~~~~d~~~la 468 (536)
T 3vue_A 394 LAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCA-CASTGGL-V-DTVI--EGKTGFHMGRLSVDCKVVEPSDVKKVA 468 (536)
T ss_dssp HHHHHHHHCSEEEECCSCCSSCSHHHHHHHTTCCEE-ECSCTHH-H-HHCC--BTTTEEECCCCCSCTTCCCHHHHHHHH
T ss_pred HHHHHHHhhheeecccccCCCCHHHHHHHHcCCCEE-EcCCCCc-h-heee--CCCCccccccCCCceeEECCCCHHHHH
Confidence 456778999999999766665667999999998655 4442110 0 0000 1 01111 122322332000
Q ss_pred ccHHHHHhcCCHHHHHHHHHHHhhhcceeEEecC
Q 011220 425 KSIKAVLESYSQEEVKRMRDKVIDYIPKFIYAKS 458 (490)
Q Consensus 425 ~~l~~iL~~Is~~~i~~Mr~~l~~v~~~f~Y~~p 458 (490)
..|...|.-..++++.+|+++. +.++|.|...
T Consensus 469 ~ai~ral~~~~~~~~~~~~~~a--m~~~fSW~~~ 500 (536)
T 3vue_A 469 ATLKRAIKVVGTPAYEEMVRNC--MNQDLSWKGP 500 (536)
T ss_dssp HHHHHHHHHTTSHHHHHHHHHH--HHSCCSSHHH
T ss_pred HHHHHHHHhcCcHHHHHHHHHH--HHhcCCHHHH
Confidence 1234444445566788888775 4467877653
No 24
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=53.73 E-value=2.9 Score=41.09 Aligned_cols=36 Identities=14% Similarity=0.143 Sum_probs=29.7
Q ss_pred hhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecC
Q 011220 353 SAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKR 394 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~ 394 (490)
.++.+.|+.+..++.|.|- . +.|||.+|+ |||.++.
T Consensus 274 ~~~~~~~~~ad~~v~~Sg~---~--~lEA~a~G~-PvI~~~~ 309 (384)
T 1vgv_A 274 LPFVWLMNHAWLILTDSGG---I--QEEAPSLGK-PVLVMRD 309 (384)
T ss_dssp HHHHHHHHHCSEEEESSST---G--GGTGGGGTC-CEEEESS
T ss_pred HHHHHHHHhCcEEEECCcc---h--HHHHHHcCC-CEEEccC
Confidence 5788999999999988732 1 789999997 9999874
No 25
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=52.72 E-value=36 Score=29.19 Aligned_cols=87 Identities=14% Similarity=0.136 Sum_probs=45.3
Q ss_pred HHhh--ccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccccCcccHHHHHhc
Q 011220 356 LETF--LDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAVLES 433 (490)
Q Consensus 356 ~~~m--~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~l~~iL~~ 433 (490)
.+.| ..+...++..|. -.+.||+.+| +|+|+.+... .|+.+---.......+.++.+++... +|.+.|+.
T Consensus 79 ~~~l~~~~ad~~I~~~G~----~t~~Ea~~~G-~P~i~~p~~~-~Q~~na~~l~~~g~g~~~~~~~~~~~--~l~~~i~~ 150 (170)
T 2o6l_A 79 NDLLGHPKTRAFITHGGA----NGIYEAIYHG-IPMVGIPLFA-DQPDNIAHMKARGAAVRVDFNTMSST--DLLNALKR 150 (170)
T ss_dssp HHHHTSTTEEEEEECCCH----HHHHHHHHHT-CCEEECCCST-THHHHHHHHHTTTSEEECCTTTCCHH--HHHHHHHH
T ss_pred HHHhcCCCcCEEEEcCCc----cHHHHHHHcC-CCEEeccchh-hHHHHHHHHHHcCCeEEeccccCCHH--HHHHHHHH
Confidence 4566 778877776653 4589999999 7998886421 11111000022456777775543211 34444433
Q ss_pred CCHHHHHHHHHHHhhhcce
Q 011220 434 YSQEEVKRMRDKVIDYIPK 452 (490)
Q Consensus 434 Is~~~i~~Mr~~l~~v~~~ 452 (490)
+-.. .+||++..++...
T Consensus 151 ll~~--~~~~~~a~~~~~~ 167 (170)
T 2o6l_A 151 VIND--PSYKENVMKLSRI 167 (170)
T ss_dssp HHHC--HHHHHHHHHHC--
T ss_pred HHcC--HHHHHHHHHHHHH
Confidence 3111 1366666655443
No 26
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=48.39 E-value=23 Score=37.13 Aligned_cols=91 Identities=13% Similarity=0.078 Sum_probs=53.8
Q ss_pred hhhHHHhhccCeEEeccC-CCCCCchhHHHHHhhCc----eeEEeecCcccccccccCCCCCCceEEEEeccccccCccc
Q 011220 352 TSAILETFLDSVFCLQPR-GDSFTRRSIFDCMVAGS----IPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKS 426 (490)
Q Consensus 352 ~~~y~~~m~~S~FCL~P~-Gds~ssrrl~DAi~aGC----IPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~ 426 (490)
..++...++.+.-|+.|. -++.+ --..|||.+|+ -|||+++..--. -++ + -++.|+..|+..-...
T Consensus 342 ~~el~~ly~~ADv~v~pS~~EGfg-Lv~lEAmA~g~~~~~gpvV~S~~~G~~---~~l--~---~g~lv~p~d~~~lA~a 412 (482)
T 1uqt_A 342 RKLLMKIFRYSDVGLVTPLRDGMN-LVAKEYVAAQDPANPGVLVLSQFAGAA---NEL--T---SALIVNPYDRDEVAAA 412 (482)
T ss_dssp HHHHHHHHHHCSEEEECCSSBSCC-HHHHHHHHHSCTTSCCEEEEETTBGGG---GTC--T---TSEEECTTCHHHHHHH
T ss_pred HHHHHHHHHHccEEEECCCcccCC-chHHHHHHhCCCCCCCCEEEECCCCCH---HHh--C---CeEEECCCCHHHHHHH
Confidence 457888899999888775 34444 34899999998 689998742111 123 2 2566776555410012
Q ss_pred HHHHHhcCCHHHHHHHHHHHhhhcce
Q 011220 427 IKAVLESYSQEEVKRMRDKVIDYIPK 452 (490)
Q Consensus 427 l~~iL~~Is~~~i~~Mr~~l~~v~~~ 452 (490)
|.++|. .++++..+|.++..+....
T Consensus 413 i~~lL~-~~~~~r~~~~~~~~~~v~~ 437 (482)
T 1uqt_A 413 LDRALT-MSLAERISRHAEMLDVIVK 437 (482)
T ss_dssp HHHHHT-CCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHc-CCHHHHHHHHHHHHHHHHh
Confidence 333332 3566666666665554433
No 27
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=45.60 E-value=19 Score=39.88 Aligned_cols=136 Identities=11% Similarity=0.044 Sum_probs=78.9
Q ss_pred CCCeEEEecCCCcccCC---hhhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCC---
Q 011220 335 SGSCRVVDCEGTRCMNG---TSAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEP--- 408 (490)
Q Consensus 335 ~~~~~~~~c~~~~c~~~---~~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw--- 408 (490)
.+++.++...+..-+.+ ..++.+.|+.+...+.|.=..+...-..|||.+|+ |||.++..-.. ++.....-
T Consensus 489 ~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~-PvI~s~~gG~~--d~V~dg~~~~~ 565 (725)
T 3nb0_A 489 SDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGV-PSITTNVSGFG--SYMEDLIETNQ 565 (725)
T ss_dssp TCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTC-CEEEETTBHHH--HHHHTTSCHHH
T ss_pred CCceeEEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHcCC-CEEEeCCCChh--hhhhccccccC
Confidence 46777776543222222 24789999999999999755656666999999996 56666642110 01111110
Q ss_pred -CceEEEEecc---ccccCcccHHHHHh---cCCHHHHHHHHHHHhhhcceeEEecCCCCCCchhhHHHHHHHHH
Q 011220 409 -GSYSVFIDRN---EVRNGTKSIKAVLE---SYSQEEVKRMRDKVIDYIPKFIYAKSREGLGTIKDAFDVAIDGV 476 (490)
Q Consensus 409 -~~fSV~I~e~---dv~~g~~~l~~iL~---~Is~~~i~~Mr~~l~~v~~~f~Y~~p~~~~~~~~DAfd~~l~~l 476 (490)
....+.|+.. +...-...|.+.|. .-++++..+|+++..++...|.|..-... ..++++.++...
T Consensus 566 ~~~tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~iA~~---Yl~~Ye~aL~~~ 637 (725)
T 3nb0_A 566 AKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLDWKRMGLE---YVKARQLALRRG 637 (725)
T ss_dssp HHHTTEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHHHHHH---HHHHHHHHHHHH
T ss_pred CCCceEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHH---HHHHHHHHHhhc
Confidence 0234555321 11100003444443 34678889999998888899999875432 245555555443
No 28
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=31.77 E-value=2.6e+02 Score=26.99 Aligned_cols=35 Identities=11% Similarity=0.235 Sum_probs=28.2
Q ss_pred hHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeec
Q 011220 354 AILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWK 393 (490)
Q Consensus 354 ~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd 393 (490)
+..+.|+.+..++++.|. ..+.|||.+| +|||+.+
T Consensus 301 ~~~~~l~~ad~~v~~~g~----~t~~Ea~a~G-~P~v~~p 335 (412)
T 3otg_A 301 PQAALLPHVDLVVHHGGS----GTTLGALGAG-VPQLSFP 335 (412)
T ss_dssp CHHHHGGGCSEEEESCCH----HHHHHHHHHT-CCEEECC
T ss_pred CHHHHHhcCcEEEECCch----HHHHHHHHhC-CCEEecC
Confidence 567889999988888764 3589999999 5898864
No 29
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=28.17 E-value=44 Score=32.18 Aligned_cols=36 Identities=17% Similarity=0.161 Sum_probs=29.3
Q ss_pred hhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecC
Q 011220 353 SAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKR 394 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~ 394 (490)
.++.+.|+.+.+++.|.| .-+.|||.+|+ |||.++.
T Consensus 274 ~~~~~~~~~ad~~v~~sg-----~~~lEA~a~G~-Pvi~~~~ 309 (375)
T 3beo_A 274 IDFHNVAARSYLMLTDSG-----GVQEEAPSLGV-PVLVLRD 309 (375)
T ss_dssp HHHHHHHHTCSEEEECCH-----HHHHHHHHHTC-CEEECSS
T ss_pred HHHHHHHHhCcEEEECCC-----ChHHHHHhcCC-CEEEecC
Confidence 478889999999999862 22899999997 8998854
No 30
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=24.46 E-value=2.9e+02 Score=26.49 Aligned_cols=34 Identities=15% Similarity=0.394 Sum_probs=26.9
Q ss_pred HHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeec
Q 011220 355 ILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWK 393 (490)
Q Consensus 355 y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd 393 (490)
..++|..+..+++..|. -.+.||+.+| +|+|+..
T Consensus 291 ~~~ll~~ad~~v~~~G~----~t~~Ea~~~G-~P~v~~p 324 (402)
T 3ia7_A 291 FHSVLAHARACLTHGTT----GAVLEAFAAG-VPLVLVP 324 (402)
T ss_dssp HHHHHTTEEEEEECCCH----HHHHHHHHTT-CCEEECG
T ss_pred HHHHHhhCCEEEECCCH----HHHHHHHHhC-CCEEEeC
Confidence 34899999999988774 3479999999 5888764
No 31
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=23.89 E-value=2.1e+02 Score=28.50 Aligned_cols=99 Identities=11% Similarity=0.080 Sum_probs=54.3
Q ss_pred hhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccccCcccHHHHHh
Q 011220 353 SAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAVLE 432 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~l~~iL~ 432 (490)
.++...|+.|.+.+.+.| + -..||+.+| +|||+.++..-.|. + .+ ....+.++. +.. +|.+.+.
T Consensus 293 ~~~~~l~~~ad~vv~~SG---g--~~~EA~a~g-~PvV~~~~~~~~~e---~-v~-~g~~~lv~~-d~~----~l~~ai~ 356 (403)
T 3ot5_A 293 IDFHNFLRKSYLVFTDSG---G--VQEEAPGMG-VPVLVLRDTTERPE---G-IE-AGTLKLIGT-NKE----NLIKEAL 356 (403)
T ss_dssp HHHHHHHHHEEEEEECCH---H--HHHHGGGTT-CCEEECCSSCSCHH---H-HH-HTSEEECCS-CHH----HHHHHHH
T ss_pred HHHHHHHHhcCEEEECCc---c--HHHHHHHhC-CCEEEecCCCcchh---h-ee-CCcEEEcCC-CHH----HHHHHHH
Confidence 478899999999887654 1 126999888 69998753211110 1 01 123344432 221 3333333
Q ss_pred cC--CHHHHHHHHHHHhhhcceeEEecCCCCCCchhhHHHHHHHHHHHHHH
Q 011220 433 SY--SQEEVKRMRDKVIDYIPKFIYAKSREGLGTIKDAFDVAIDGVLRRIK 481 (490)
Q Consensus 433 ~I--s~~~i~~Mr~~l~~v~~~f~Y~~p~~~~~~~~DAfd~~l~~l~~Ri~ 481 (490)
.+ .++...+|.++. .. | +. .+|-+-+++.|.+.+.
T Consensus 357 ~ll~~~~~~~~m~~~~----~~--~----g~----~~aa~rI~~~l~~~l~ 393 (403)
T 3ot5_A 357 DLLDNKESHDKMAQAA----NP--Y----GD----GFAANRILAAIKSHFE 393 (403)
T ss_dssp HHHHCHHHHHHHHHSC----CT--T----CC----SCHHHHHHHHHHHHHT
T ss_pred HHHcCHHHHHHHHhhc----Cc--c----cC----CcHHHHHHHHHHHHhC
Confidence 22 466677776542 11 2 21 4677777777776654
No 32
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=23.75 E-value=58 Score=32.61 Aligned_cols=41 Identities=12% Similarity=0.119 Sum_probs=32.6
Q ss_pred hhHHHhhccCeEEeccCCCCCCchhHHHHH-------hhCceeEEeecC
Q 011220 353 SAILETFLDSVFCLQPRGDSFTRRSIFDCM-------VAGSIPVFFWKR 394 (490)
Q Consensus 353 ~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi-------~aGCIPViisd~ 394 (490)
.+..+.|+.+..++.|.-.......+.||| .+|+ |||.++.
T Consensus 276 ~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~-PVIas~~ 323 (406)
T 2hy7_A 276 AQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGL-PAVCPNA 323 (406)
T ss_dssp HHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTC-CEEEEGG
T ss_pred HHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCC-cEEEehh
Confidence 467889999999999875544455689999 9995 8999874
Done!