BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011226
(490 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255573975|ref|XP_002527905.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532680|gb|EEF34462.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 490
Score = 828 bits (2139), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/490 (80%), Positives = 433/490 (88%)
Query: 1 MAMPQRFGRTKNIAKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGD 60
MAMPQ FGRTKN+AKRSKK+LEEALY RLFK+GSS+V VR+QLNQFLKS KRV+KWEVGD
Sbjct: 1 MAMPQLFGRTKNVAKRSKKYLEEALYFRLFKEGSSEVKVREQLNQFLKSSKRVYKWEVGD 60
Query: 61 TLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS 120
TLKKLR R LYYPALKLSE M KRGMNKTVSDQAIHLDLVAK +GI AAE +F+DLPETS
Sbjct: 61 TLKKLRSRGLYYPALKLSEAMSKRGMNKTVSDQAIHLDLVAKTRGIPAAEIFFIDLPETS 120
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
KNHLTYG+LLNCYC +LMTE+AEAL+EKMKELNLG SSM +NSLMTLY K G PE+IP I
Sbjct: 121 KNHLTYGALLNCYCNQLMTEEAEALMEKMKELNLGLSSMSYNSLMTLYTKIGQPERIPGI 180
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
IQEMK+ SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTT+SNLASIYV
Sbjct: 181 IQEMKSDSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTYSNLASIYV 240
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
+A LFEKAE+ LKELE RN HRD SA+QFLITLYG+ GNL E+YRIWRSLRLAFP T+NI
Sbjct: 241 DAQLFEKAEKTLKELEKRNVHRDHSAFQFLITLYGRIGNLHELYRIWRSLRLAFPKTSNI 300
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
SYLNMIQVLVNLKDLPGAEKCF+EWES C+ YDIRV NV+I AYAK+G LE AEELKERA
Sbjct: 301 SYLNMIQVLVNLKDLPGAEKCFREWESNCSGYDIRVANVLIKAYAKKGLLEKAEELKERA 360
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 420
RGA PNAKTWEIFSDYY NGD+KL+V+CL AI GRGDG KW+PS E + +FM HF
Sbjct: 361 IGRGAKPNAKTWEIFSDYYFENGDIKLSVECLANAISKGRGDGQKWIPSPEVVASFMAHF 420
Query: 421 EQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEAS 480
EQ+KDVDGAEGF+EILKKA DD+ VFE LIRTYAAAGRTS V+ RRLKME VEVSEA
Sbjct: 421 EQQKDVDGAEGFIEILKKATDDVEANVFESLIRTYAAAGRTSQVLRRRLKMENVEVSEAG 480
Query: 481 KKLLEAICVE 490
+KLLE ICVE
Sbjct: 481 QKLLEMICVE 490
>gi|225468646|ref|XP_002267979.1| PREDICTED: pentatricopeptide repeat-containing protein At1g60770
[Vitis vinifera]
Length = 489
Score = 828 bits (2139), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/490 (80%), Positives = 435/490 (88%), Gaps = 1/490 (0%)
Query: 1 MAMPQRFGRTKNIAKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGD 60
MAMPQ RTKNIAKRSKK+LEEALYDRLFK GSS+VSVRQQLN FLKS KRVFKWEVGD
Sbjct: 1 MAMPQ-LSRTKNIAKRSKKYLEEALYDRLFKDGSSEVSVRQQLNHFLKSSKRVFKWEVGD 59
Query: 61 TLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS 120
T+KKLRDRK +YPALKLSE M KRGMN T+SDQAI+LDL+ K +G+ AAENYF+DLPETS
Sbjct: 60 TVKKLRDRKRFYPALKLSETMAKRGMNMTISDQAIYLDLITKTRGVAAAENYFIDLPETS 119
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
KNHLTYG+LLNCYCKEL+TEKAEAL+E+MKEL LG SSMP+NSLMTLY K G PEKIP I
Sbjct: 120 KNHLTYGALLNCYCKELLTEKAEALMERMKELKLGLSSMPYNSLMTLYTKIGQPEKIPTI 179
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
IQE+K+ IMPDSYTYN+WMRALAAVNDISG ERVIEEMKRDGRVA+DWTT+SNLASIYV
Sbjct: 180 IQELKSLDIMPDSYTYNIWMRALAAVNDISGVERVIEEMKRDGRVASDWTTYSNLASIYV 239
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
+AG+FEKAE+ALKELE RNA RDL+A+QFLITLYG+ GNL EVYR+WRSLRLAFP TAN+
Sbjct: 240 DAGVFEKAEKALKELEKRNACRDLTAFQFLITLYGRIGNLLEVYRVWRSLRLAFPKTANV 299
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
SYLNMIQVLVNLKDLPGAEKCF+EWESGC+ YDIRV N +IGAYAK+G LE AEELKE A
Sbjct: 300 SYLNMIQVLVNLKDLPGAEKCFREWESGCSIYDIRVANALIGAYAKDGLLEKAEELKEHA 359
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 420
RRRGA PNAKTWEIF Y+L+N +MK AVDC+ AI TGRGDG KWVPS E I FM+HF
Sbjct: 360 RRRGAKPNAKTWEIFLAYHLKNREMKQAVDCVANAISTGRGDGQKWVPSPEIIGVFMQHF 419
Query: 421 EQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEAS 480
EQEKDVDGAEGFLEILK V+DLGVEVFE LIR YAAAGRTSPVM RRLKME VEVS++
Sbjct: 420 EQEKDVDGAEGFLEILKSTVEDLGVEVFESLIRIYAAAGRTSPVMRRRLKMENVEVSDSC 479
Query: 481 KKLLEAICVE 490
KKLLE + VE
Sbjct: 480 KKLLEEVSVE 489
>gi|224119780|ref|XP_002331159.1| predicted protein [Populus trichocarpa]
gi|118487894|gb|ABK95769.1| unknown [Populus trichocarpa]
gi|222873242|gb|EEF10373.1| predicted protein [Populus trichocarpa]
Length = 490
Score = 820 bits (2119), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/490 (79%), Positives = 435/490 (88%)
Query: 1 MAMPQRFGRTKNIAKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGD 60
MAMPQ +GRTK++ KRSKK+LEEALY RLFK+GSS+VSVRQQLNQFLKS KRVFKWEVGD
Sbjct: 1 MAMPQLYGRTKSVTKRSKKYLEEALYVRLFKEGSSEVSVRQQLNQFLKSSKRVFKWEVGD 60
Query: 61 TLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS 120
T+KKLR R LYYPA+KLSE M RGMNKTVSDQAIHLDLVAK +GI AAENYF+DLPETS
Sbjct: 61 TIKKLRSRNLYYPAVKLSETMSSRGMNKTVSDQAIHLDLVAKTRGIPAAENYFIDLPETS 120
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
KN TYG+LLNCYCKELMTE+AEAL+EKMKELNLG SSM +NSLMTLY K G PE+IPAI
Sbjct: 121 KNLRTYGALLNCYCKELMTEEAEALIEKMKELNLGLSSMSYNSLMTLYTKVGQPERIPAI 180
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
IQEMKA ++MPDSYTYNVWMRALAAVNDISG ERVIEEMKRDGRVAA+WTT+SNLASIYV
Sbjct: 181 IQEMKADNVMPDSYTYNVWMRALAAVNDISGVERVIEEMKRDGRVAANWTTYSNLASIYV 240
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
+AG F+KAE+ALKELE NA++DL A+QFLITLYG+TG L EVYRIWRSLRLAFP TANI
Sbjct: 241 DAGYFDKAEKALKELEKINANKDLFAFQFLITLYGRTGKLIEVYRIWRSLRLAFPKTANI 300
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
SYLNMIQVLVNLKD+PGAEKCF+EWESGC+TYDIRV NV+I AYAKEG ++ AEELKERA
Sbjct: 301 SYLNMIQVLVNLKDVPGAEKCFREWESGCSTYDIRVANVVISAYAKEGLVDKAEELKERA 360
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 420
RRRGA PN+KTWEIF DYYL+NGD+KL VDC+ A+ GRG+G KWVPS + + M HF
Sbjct: 361 RRRGAKPNSKTWEIFCDYYLKNGDVKLGVDCIANAVSAGRGNGQKWVPSPVIVGSLMAHF 420
Query: 421 EQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEAS 480
EQ+KDVDGAE +EILKKAVDD+ VEVFE LIRTYAAAGR S +M RRLKME VEVS+
Sbjct: 421 EQQKDVDGAEDLIEILKKAVDDVAVEVFESLIRTYAAAGRKSQLMRRRLKMENVEVSDDC 480
Query: 481 KKLLEAICVE 490
+KLLEAICVE
Sbjct: 481 QKLLEAICVE 490
>gi|356526773|ref|XP_003531991.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Glycine max]
Length = 490
Score = 773 bits (1995), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/490 (76%), Positives = 417/490 (85%)
Query: 1 MAMPQRFGRTKNIAKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGD 60
M++ Q +GR+K++ KRSKK+LEEALY +LFK GSS + VRQ LN F+KS+KRV+KWEVGD
Sbjct: 1 MSIMQLYGRSKSVVKRSKKYLEEALYMKLFKDGSSQLIVRQSLNNFVKSRKRVYKWEVGD 60
Query: 61 TLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS 120
TLKKLRDRKLY PALKLSE M KR M KTVSD AIHLDL+AK +GI AAENYFV LPE S
Sbjct: 61 TLKKLRDRKLYQPALKLSETMAKRNMIKTVSDHAIHLDLLAKARGITAAENYFVSLPEPS 120
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
KNHL YG+LLNCYCKELMTEK+E L+EKMKEL+L SSMP+NSLMTLY K G PEKIP++
Sbjct: 121 KNHLCYGALLNCYCKELMTEKSEGLMEKMKELSLPLSSMPYNSLMTLYTKVGQPEKIPSL 180
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
IQEMKAS++M DSYTYNVWMRALAAVNDISG ERV +EMKR G+V DWTT+SNLASI+V
Sbjct: 181 IQEMKASNVMLDSYTYNVWMRALAAVNDISGVERVHDEMKRGGQVTGDWTTYSNLASIFV 240
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
+AGLF+KAE ALKELE RNA +DL+AYQFLITLYG+TGNL EVYR+WRSLRLAFP TANI
Sbjct: 241 DAGLFDKAEVALKELEKRNAFKDLTAYQFLITLYGRTGNLYEVYRVWRSLRLAFPKTANI 300
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
SYLNMIQVLVNLKDLPGAEKCF+EWE GC TYDIRV NV+I AY K LE AEELKERA
Sbjct: 301 SYLNMIQVLVNLKDLPGAEKCFREWECGCPTYDIRVANVLIRAYVKLDMLEKAEELKERA 360
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 420
RRRGA PNAKT EIF DYYL GD KLAVD L +AI GRG+G KWVPSS I MRHF
Sbjct: 361 RRRGAKPNAKTLEIFMDYYLLKGDFKLAVDYLNEAISMGRGNGEKWVPSSRIISIMMRHF 420
Query: 421 EQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEAS 480
EQEKDVDGAE FLEILKK+V+ GVEVFE LIRTYAAAGR S M RRLKME VEVSE +
Sbjct: 421 EQEKDVDGAEEFLEILKKSVESPGVEVFESLIRTYAAAGRISSAMQRRLKMENVEVSEGT 480
Query: 481 KKLLEAICVE 490
+KLLEAI VE
Sbjct: 481 QKLLEAISVE 490
>gi|297837423|ref|XP_002886593.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332434|gb|EFH62852.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 491
Score = 743 bits (1919), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/491 (70%), Positives = 412/491 (83%), Gaps = 2/491 (0%)
Query: 1 MAMPQRFGRTKNIAKRS-KKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVG 59
MAM + R++++ KRS KK++EE LY RLFK G ++V VRQQLNQFLK K VFKWEVG
Sbjct: 1 MAM-RHLSRSRDVTKRSTKKYIEEPLYHRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVG 59
Query: 60 DTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET 119
DT+KKLR+R LYYPALKLSE ME+RGMNKTVSDQAIHLDLVAK +GI A ENYFVDLPET
Sbjct: 60 DTIKKLRNRGLYYPALKLSEVMEERGMNKTVSDQAIHLDLVAKARGITAGENYFVDLPET 119
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
SK LTYGSLLNCYCKEL+TEKAE LL KMKELN+ SSM +NSLMTLY KTG EK+PA
Sbjct: 120 SKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGQTEKVPA 179
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+IQE+KA ++MPDSYTYNVWMRALAA NDISG ERVIEEM RDGRVA DWTT+SN+ASIY
Sbjct: 180 MIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIY 239
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
V+AGL +KAE+AL+ELE +N RD +AYQFLITLYG+ G L+EVYRIWRSLRLA P T+N
Sbjct: 240 VDAGLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAMPKTSN 299
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
++YLNMIQVLV L DLPGAE FKEW++ C+TYDIR+ NV+IGAYAKEG +E A+ELKE+
Sbjct: 300 VAYLNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAKEGLIEKAKELKEK 359
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
A RRG NAKTWEIF DYY+++GDM A++C+ KA+ G+GDGGKW+PS ET+RT M +
Sbjct: 360 APRRGGKANAKTWEIFMDYYVKSGDMAHALECMSKAVSIGKGDGGKWIPSQETVRTLMSY 419
Query: 420 FEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEA 479
FEQ+KDV+GAE LEILK D++G E+FE LIRTYAAAG++ P M RRLKME VEV+E
Sbjct: 420 FEQKKDVNGAENLLEILKNGTDNIGAEIFESLIRTYAAAGKSHPAMRRRLKMENVEVNEV 479
Query: 480 SKKLLEAICVE 490
+KKLL+ + E
Sbjct: 480 TKKLLDEVSQE 490
>gi|15219808|ref|NP_176276.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097554|sp|O22714.1|PPR86_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g60770
gi|2462744|gb|AAB71963.1| Hypothetical protein [Arabidopsis thaliana]
gi|27754491|gb|AAO22693.1| unknown protein [Arabidopsis thaliana]
gi|28393975|gb|AAO42395.1| unknown protein [Arabidopsis thaliana]
gi|332195609|gb|AEE33730.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 491
Score = 738 bits (1904), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/489 (70%), Positives = 411/489 (84%), Gaps = 2/489 (0%)
Query: 1 MAMPQRFGRTKNIAKRS-KKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVG 59
MAM + R++++ KRS KK++EE LY+RLFK G ++V VRQQLNQFLK K VFKWEVG
Sbjct: 1 MAM-RHLSRSRDVTKRSTKKYIEEPLYNRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVG 59
Query: 60 DTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET 119
DT+KKLR+R LYYPALKLSE ME+RGMNKTVSDQAIHLDLVAK + I A ENYFVDLPET
Sbjct: 60 DTIKKLRNRGLYYPALKLSEVMEERGMNKTVSDQAIHLDLVAKAREITAGENYFVDLPET 119
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
SK LTYGSLLNCYCKEL+TEKAE LL KMKELN+ SSM +NSLMTLY KTG EK+PA
Sbjct: 120 SKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPA 179
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+IQE+KA ++MPDSYTYNVWMRALAA NDISG ERVIEEM RDGRVA DWTT+SN+ASIY
Sbjct: 180 MIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIY 239
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
V+AGL +KAE+AL+ELE +N RD +AYQFLITLYG+ G L+EVYRIWRSLRLA P T+N
Sbjct: 240 VDAGLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSN 299
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
++YLNMIQVLV L DLPGAE FKEW++ C+TYDIR+ NV+IGAYA+EG ++ A ELKE+
Sbjct: 300 VAYLNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEK 359
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
A RRG NAKTWEIF DYY+++GDM A++C+ KA+ G+GDGGKW+PS ET+R M +
Sbjct: 360 APRRGGKLNAKTWEIFMDYYVKSGDMARALECMSKAVSIGKGDGGKWLPSPETVRALMSY 419
Query: 420 FEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEA 479
FEQ+KDV+GAE LEILK D++G E+FEPLIRTYAAAG++ P M RRLKME VEV+EA
Sbjct: 420 FEQKKDVNGAENLLEILKNGTDNIGAEIFEPLIRTYAAAGKSHPAMRRRLKMENVEVNEA 479
Query: 480 SKKLLEAIC 488
+KKLL+ +
Sbjct: 480 TKKLLDEVS 488
>gi|449434959|ref|XP_004135263.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Cucumis sativus]
gi|449478594|ref|XP_004155363.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g60770-like [Cucumis sativus]
Length = 489
Score = 734 bits (1894), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/492 (73%), Positives = 409/492 (83%), Gaps = 5/492 (1%)
Query: 1 MAMP-QRFGRTKNIAKRS-KKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEV 58
MA P Q+F +K++AKRS +K+LEEALY RLFK G S+ SVR QLN+F+KS KRVFKWEV
Sbjct: 1 MASPLQKFRPSKDLAKRSAEKYLEEALYIRLFKDGGSEKSVRLQLNKFIKSHKRVFKWEV 60
Query: 59 GDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE 118
GDTL+KLRDRKLYYPALKLSE M KRGMNKTVSDQAIHLDLVAK +GIDAAENYFV LPE
Sbjct: 61 GDTLRKLRDRKLYYPALKLSEIMAKRGMNKTVSDQAIHLDLVAKARGIDAAENYFVSLPE 120
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
+SKNHL+Y SLLNCYCKEL+TEKAEAL EK+KELNL + +P+NSLMTLY+K G P+K+
Sbjct: 121 SSKNHLSYSSLLNCYCKELLTEKAEALFEKIKELNLPVTPVPYNSLMTLYSKIGRPDKVC 180
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
IIQEMKA+++ D YTY VWMRALAA+NDISG ERVI+EMKRDG V DWTT+SNLASI
Sbjct: 181 TIIQEMKAANVTFDPYTYIVWMRALAALNDISGVERVIDEMKRDG-VKGDWTTYSNLASI 239
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
YV A +FEKA +ALK+LE N RDL +QFLITLYGQ G+L+EVYR+WRSLRLAFP TA
Sbjct: 240 YVNANMFEKAAKALKDLEKINTRRDLIGFQFLITLYGQIGDLTEVYRVWRSLRLAFPRTA 299
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
NISYLNMIQ L LKDLPGAEKCFKEWESG TYDIR+ N +IGAY K G LE A LKE
Sbjct: 300 NISYLNMIQTLTKLKDLPGAEKCFKEWESGSPTYDIRIPNALIGAYTKGGLLEKAMALKE 359
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 418
RA RRGA PNAKTWE F +YYL+NGD KLA DC+ KAI G+GD GKW+PS E I++FM
Sbjct: 360 RALRRGARPNAKTWEFFLNYYLKNGDFKLAGDCVAKAI--GKGDRGKWIPSPEIIKSFMS 417
Query: 419 HFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSE 478
HFEQEKDVDGAE FLEI+KK VD L EVFE LIRTY+AAGRTS M RRLKME VEVSE
Sbjct: 418 HFEQEKDVDGAESFLEIVKKTVDSLESEVFESLIRTYSAAGRTSSSMSRRLKMENVEVSE 477
Query: 479 ASKKLLEAICVE 490
A KKLL I +E
Sbjct: 478 ACKKLLNKISIE 489
>gi|296083491|emb|CBI23460.3| unnamed protein product [Vitis vinifera]
Length = 444
Score = 731 bits (1887), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/490 (73%), Positives = 397/490 (81%), Gaps = 46/490 (9%)
Query: 1 MAMPQRFGRTKNIAKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGD 60
MAMPQ RTKNIAKRSKK+LEEALYDRLFK GSS+VSVRQQLN FLKS KRVFKWEVGD
Sbjct: 1 MAMPQ-LSRTKNIAKRSKKYLEEALYDRLFKDGSSEVSVRQQLNHFLKSSKRVFKWEVGD 59
Query: 61 TLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS 120
T+KKLRDRK +YPALKLSE M KRGMN T+SDQAI+LDL+ K +G+ AAENYF+DLPETS
Sbjct: 60 TVKKLRDRKRFYPALKLSETMAKRGMNMTISDQAIYLDLITKTRGVAAAENYFIDLPETS 119
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
KNHLTYG+LLNCYCKEL+TEKAEAL+E+MKEL LG SSMP+NSLMTLY K G PEKIP I
Sbjct: 120 KNHLTYGALLNCYCKELLTEKAEALMERMKELKLGLSSMPYNSLMTLYTKIGQPEKIPTI 179
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
IQE+K+ IMPDSYTYN+WMRALAAVNDISG ERVIEEMKRDGRVA+DWTT+SNLASIYV
Sbjct: 180 IQELKSLDIMPDSYTYNIWMRALAAVNDISGVERVIEEMKRDGRVASDWTTYSNLASIYV 239
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
+AG+FEKAE+ALKELE RNA RDL+A+QFLITLYG+ GNL EVYR+WRSLRLAFP TAN+
Sbjct: 240 DAGVFEKAEKALKELEKRNACRDLTAFQFLITLYGRIGNLLEVYRVWRSLRLAFPKTANV 299
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
SYLNMIQVLVNLKDLPGAEKCF+EWESGC+ YDIRV N +IGAYAK+G LE AEELKE A
Sbjct: 300 SYLNMIQVLVNLKDLPGAEKCFREWESGCSIYDIRVANALIGAYAKDGLLEKAEELKEHA 359
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 420
RRRGA PNAKTWEIF Y+L+N +MK AVDC+ AI T
Sbjct: 360 RRRGAKPNAKTWEIFLAYHLKNREMKQAVDCVANAIST---------------------- 397
Query: 421 EQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEAS 480
GVEVFE LIR YAAAGRTSPVM RRLKME VEVS++
Sbjct: 398 -----------------------GVEVFESLIRIYAAAGRTSPVMRRRLKMENVEVSDSC 434
Query: 481 KKLLEAICVE 490
KKLLE + VE
Sbjct: 435 KKLLEEVSVE 444
>gi|115457716|ref|NP_001052458.1| Os04g0320200 [Oryza sativa Japonica Group]
gi|32490390|emb|CAE04700.1| OSJNBa0041M06.2 [Oryza sativa Japonica Group]
gi|38344779|emb|CAE01505.2| OSJNBb0026L04.10 [Oryza sativa Japonica Group]
gi|113564029|dbj|BAF14372.1| Os04g0320200 [Oryza sativa Japonica Group]
gi|125543501|gb|EAY89640.1| hypothetical protein OsI_11170 [Oryza sativa Indica Group]
gi|125589896|gb|EAZ30246.1| hypothetical protein OsJ_14297 [Oryza sativa Japonica Group]
gi|215767374|dbj|BAG99602.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 524
Score = 618 bits (1593), Expect = e-174, Method: Compositional matrix adjust.
Identities = 309/520 (59%), Positives = 375/520 (72%), Gaps = 38/520 (7%)
Query: 9 RTKNIAKRS-KKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRD 67
R K++A+RS KK+++EALY RLF++GS+ +VR++++ FL S+KR FKWEVG +++LR
Sbjct: 4 RVKDVARRSSKKYVDEALYRRLFRRGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRRLRK 63
Query: 68 RKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYG 127
+ LY PALKLSE M +RGMN TVSDQAI LDLVAK +GI AAE YF+DLPETSK HLTYG
Sbjct: 64 QALYRPALKLSEVMARRGMNPTVSDQAIRLDLVAKSRGIAAAEKYFLDLPETSKTHLTYG 123
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 187
+LLNCYCK+LMTEKAEAL+ KMKELN F++M +NSLMTLY K EK+P++IQ+MKA
Sbjct: 124 ALLNCYCKDLMTEKAEALMGKMKELNFAFTAMCYNSLMTLYTKVNQHEKVPSVIQDMKAD 183
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
++PD YTYNVWMRALAA DI G ERVIEEMKRDGRV DWTT+SNLASIYV+AGLFEK
Sbjct: 184 DVLPDIYTYNVWMRALAARVDIKGVERVIEEMKRDGRVTPDWTTYSNLASIYVDAGLFEK 243
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 307
AE ALKELE N DL AYQFLITLY +T NL EV+R+WRSL+ P AN+SYLNMIQ
Sbjct: 244 AEAALKELEKWNTSNDLEAYQFLITLYARTQNLVEVHRVWRSLKRNQPRRANMSYLNMIQ 303
Query: 308 VLVNLKDLPGAEKCFKEWES-------------GCA------------------------ 330
L NLKDLPGAE CFKEWE+ G A
Sbjct: 304 ALANLKDLPGAEACFKEWEAQYINPPKTNTKAPGTAETSSNESDVKATKDKGTDGELKHP 363
Query: 331 TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
YDIRV N MI AY EG + A +K+RA+ RG NAKTWEIF ++YL+ GD+K+
Sbjct: 364 KYDIRVANAMIKAYITEGMFDKAVAVKKRAKMRGGRLNAKTWEIFMEHYLKEGDLKMVHW 423
Query: 391 CLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEP 450
C ++AI G G WVP E T M +FE+ KDVDGAE F+E+LKK DLG VFEP
Sbjct: 424 CADRAIKKGHSAGRIWVPPHEVTETLMDYFEKNKDVDGAEKFVEVLKKVQKDLGTVVFEP 483
Query: 451 LIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAICVE 490
L+RTYAAAG+ P M RLK+E VEVSE + KLL+++C++
Sbjct: 484 LVRTYAAAGKKLPGMRHRLKIENVEVSEETAKLLDSVCID 523
>gi|116309055|emb|CAH66166.1| H0107B07.5 [Oryza sativa Indica Group]
Length = 524
Score = 616 bits (1589), Expect = e-174, Method: Compositional matrix adjust.
Identities = 308/520 (59%), Positives = 374/520 (71%), Gaps = 38/520 (7%)
Query: 9 RTKNIAKRS-KKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRD 67
R K++A+RS KK+++EALY RLF++GS+ +VR++++ FL S+KR FKWEVG +++LR
Sbjct: 4 RVKDVARRSSKKYVDEALYRRLFRRGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRRLRK 63
Query: 68 RKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYG 127
+ LY PALKLSE M +RGMN TVSDQAI LDLVAK +GI AAE YF+DLPETSK HLTYG
Sbjct: 64 QALYRPALKLSEVMARRGMNPTVSDQAIRLDLVAKSRGIAAAEKYFLDLPETSKTHLTYG 123
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 187
+LLNCYCK+LMTEKAEAL+ KMKELN F++M +NSLMTLY K EK+P++IQ+MKA
Sbjct: 124 ALLNCYCKDLMTEKAEALMGKMKELNFAFTAMCYNSLMTLYTKVNQHEKVPSVIQDMKAD 183
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
++PD YTYNVWMRALAA DI G ERVIEEMKRDGRV DWTT+SNLASIYV+AGLFEK
Sbjct: 184 DVLPDIYTYNVWMRALAARVDIKGVERVIEEMKRDGRVTPDWTTYSNLASIYVDAGLFEK 243
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 307
AE ALKELE N DL AYQFLITLY +T NL EV+R+WRSL+ P AN+SYLNMIQ
Sbjct: 244 AEAALKELEKWNTSNDLEAYQFLITLYARTQNLVEVHRVWRSLKRNQPRRANMSYLNMIQ 303
Query: 308 VLVNLKDLPGAEKCFKEWES-------------GCA------------------------ 330
L NLKDLPGAE CFKEWE+ G A
Sbjct: 304 ALANLKDLPGAEACFKEWEAQYINPPKTNTKAPGTAETSSNESDVKATKDKGTDGELKHP 363
Query: 331 TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
YDIRV N MI Y EG + A +K+RA+ RG NAKTWEIF ++YL+ GD+K+
Sbjct: 364 KYDIRVANAMIKEYITEGMFDQAVAVKKRAKMRGGRLNAKTWEIFMEHYLKEGDLKMVHW 423
Query: 391 CLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEP 450
C ++AI G G WVP E T M +FE+ KDVDGAE F+E+LKK DLG VFEP
Sbjct: 424 CADRAIKKGHSAGRIWVPPHEVTETLMDYFEKNKDVDGAEKFVEVLKKVQKDLGTVVFEP 483
Query: 451 LIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAICVE 490
L+RTYAAAG+ P M RLK+E VEVSE + KLL+++C++
Sbjct: 484 LVRTYAAAGKKLPGMRHRLKIENVEVSEETAKLLDSVCID 523
>gi|357110627|ref|XP_003557118.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Brachypodium distachyon]
Length = 536
Score = 613 bits (1582), Expect = e-173, Method: Compositional matrix adjust.
Identities = 309/533 (57%), Positives = 377/533 (70%), Gaps = 51/533 (9%)
Query: 9 RTKNIAKRS-KKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRD 67
R K++A+RS KK++EEALY RLF++GS+ +VR++++ FL S+KR FKWEVG +++LR
Sbjct: 4 RVKDLARRSSKKYVEEALYRRLFRRGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRRLRR 63
Query: 68 RKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYG 127
++LY PALKL+E M +RGMN TV DQAI LDLVAK +GI AAE YF+DLPETSK HLTYG
Sbjct: 64 QELYRPALKLTEVMARRGMNPTVGDQAIRLDLVAKSRGIAAAEKYFMDLPETSKTHLTYG 123
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 187
+LLNCYCKE MTEKAEAL+EKMKELN F++M +NSLMTLY K PEK+P+IIQ+MKA
Sbjct: 124 ALLNCYCKESMTEKAEALMEKMKELNFAFTAMSYNSLMTLYTKVNQPEKVPSIIQDMKAD 183
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
++PD YTYNVWMR+LAA DISG ERVIEEMKRDGRV DWTT+SNLASIYVEAGLFEK
Sbjct: 184 DVLPDVYTYNVWMRSLAARQDISGVERVIEEMKRDGRVVPDWTTYSNLASIYVEAGLFEK 243
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 307
AE ALKELE RN DL AYQFLITLYG+T NL EV+ +WRSL+ P AN+SYLNMIQ
Sbjct: 244 AEAALKELEKRNTSNDLEAYQFLITLYGRTQNLVEVHHVWRSLKRNNPRKANMSYLNMIQ 303
Query: 308 VLVNLKDLPGAEKCFKEWES---------------------------------------- 327
VL NLKDLP AE CFKEWE+
Sbjct: 304 VLANLKDLPAAEACFKEWEARYIRPPKTKAIDAVTTETSKLDQESSTTNASNNDSDAKGT 363
Query: 328 ---GCATYD-------IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 377
G D IRV N ++ AY EG L+ A LK+RA+ RG N+KTWEIF +
Sbjct: 364 EDKGMEEIDMKHPKYDIRVANALMKAYVTEGMLDKAVALKKRAKMRGGRLNSKTWEIFME 423
Query: 378 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 437
+Y++ GD+K A C ++AI G G WVP + T M +FE++KDVDGAE F+E+LK
Sbjct: 424 HYIKVGDLKNAHWCTDRAIKKGHSSGRIWVPPRDVTETLMGYFEKKKDVDGAEKFVEVLK 483
Query: 438 KAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAICVE 490
K DLG VFEPL+RTYAAAG+ P M RLK+E VEVSE KL++++CV+
Sbjct: 484 KVQKDLGTVVFEPLVRTYAAAGKKFPGMRHRLKIENVEVSEEIAKLVDSLCVD 536
>gi|242091818|ref|XP_002436399.1| hypothetical protein SORBIDRAFT_10g001830 [Sorghum bicolor]
gi|241914622|gb|EER87766.1| hypothetical protein SORBIDRAFT_10g001830 [Sorghum bicolor]
Length = 536
Score = 613 bits (1580), Expect = e-173, Method: Compositional matrix adjust.
Identities = 307/532 (57%), Positives = 373/532 (70%), Gaps = 50/532 (9%)
Query: 9 RTKNIAKRS-KKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRD 67
R K++A+RS KK++EEALY RLF+KGS+ +VR++++ FL S+KR FKWEVG ++++R
Sbjct: 4 RVKDVARRSTKKYVEEALYRRLFRKGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRRMRR 63
Query: 68 RKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYG 127
LY PALKLSE M +RGMN TVSDQAI LDL+AK +GI AAE YF+DLPETSK HLTYG
Sbjct: 64 NALYRPALKLSEVMTRRGMNPTVSDQAICLDLIAKSRGIAAAEKYFLDLPETSKTHLTYG 123
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 187
+LLN YCKELMTEKAE+L+ KM ELN F++MPFNSLMT+Y K PEK+P IIQ MKA
Sbjct: 124 ALLNSYCKELMTEKAESLMAKMSELNFAFTAMPFNSLMTMYTKVNQPEKVPGIIQYMKAD 183
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
++P +TYNVWMRALAA+NDI G ERVIEEMKRDGRVA DWTT+SNLASIYV+AGLFEK
Sbjct: 184 DVLPHVFTYNVWMRALAALNDIPGVERVIEEMKRDGRVAPDWTTYSNLASIYVDAGLFEK 243
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 307
AE ALKELE RN D+ AYQFLITLYG+T NL EV+R+WRSL+ P AN+SYLNMIQ
Sbjct: 244 AEAALKELEKRNTSNDVEAYQFLITLYGRTQNLVEVHRVWRSLKRNNPRMANMSYLNMIQ 303
Query: 308 VLVNLKDLPGAEKCFKEWE-------------SGC------------------------- 329
VL NLKDLP AE CFKEWE SG
Sbjct: 304 VLANLKDLPAAEACFKEWEARHIHPPKTKAKDSGADNISTTDPESSSNLPNNQSGIKETG 363
Query: 330 -----------ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 378
YDIRV N MI AY EG L+ A +K+RA+ G NAKTWEIF ++
Sbjct: 364 DEAAKDLQLKHPKYDIRVANAMIKAYIAEGMLDKAVAVKKRAKMHGGRLNAKTWEIFMEH 423
Query: 379 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 438
+L+ GD+K+A C ++A+ G G WVP T M +FE+ KDVDGAE ++E LKK
Sbjct: 424 HLKTGDLKMAHWCADRAMKKGHSSGRIWVPPPAVTETLMSYFEENKDVDGAEQYVESLKK 483
Query: 439 AVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAICVE 490
DLG VFEPL+RTYAAAG+ P M +RLK+E VEV E + +LL++IC +
Sbjct: 484 VQKDLGTPVFEPLLRTYAAAGKKFPGMRQRLKIENVEVGEETDQLLDSICAD 535
>gi|413953408|gb|AFW86057.1| hypothetical protein ZEAMMB73_674343 [Zea mays]
Length = 596
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 306/532 (57%), Positives = 374/532 (70%), Gaps = 50/532 (9%)
Query: 9 RTKNIAKRS-KKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRD 67
R K++A+RS KK++EEALY RLF+KGS+ +VR++++ FL S+KR FKWEVG ++++R
Sbjct: 64 RMKDVARRSTKKYVEEALYRRLFRKGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRRMRR 123
Query: 68 RKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYG 127
LY P+LKLSE M +RGMN TVSDQAI LDL+AK +GI AAE YF+DLPETSK HLTYG
Sbjct: 124 NALYRPSLKLSEVMARRGMNPTVSDQAIRLDLIAKSRGIAAAEKYFLDLPETSKTHLTYG 183
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 187
+LLN YCKELMTEKAE+L+EKMKELN F++M FNSLMT+Y K EK+P+IIQ+MKA
Sbjct: 184 ALLNSYCKELMTEKAESLMEKMKELNFAFTAMSFNSLMTMYTKVNQAEKVPSIIQDMKAD 243
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
++PD +TYNVWMRALAA+ DI G ERVIEEMKRDGRVA DWTT+SNLASIYVEAG+FEK
Sbjct: 244 DVLPDVFTYNVWMRALAALKDIPGVERVIEEMKRDGRVAPDWTTYSNLASIYVEAGMFEK 303
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 307
AE ALKELE RN D+ AYQFLITLYG+T NL EV+R+WRSL+ P AN+SYLNMIQ
Sbjct: 304 AEAALKELEKRNTSNDIEAYQFLITLYGRTQNLVEVHRVWRSLKRDNPRMANMSYLNMIQ 363
Query: 308 VLVNLKDLPGAEKCFKEWE-------------SGC------------------------- 329
VL NLKDL AE CFKEWE SG
Sbjct: 364 VLANLKDLSAAEACFKEWEARHIHPPKTNTKGSGADNTPGADPKSPSNPPNNQSGTKETG 423
Query: 330 -----------ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 378
YDIRV N MI AY EG L+ A +K+RA+ RG NAKTWEIF ++
Sbjct: 424 DETAEDLQPKHPKYDIRVANAMIKAYITEGMLDKAVAMKKRAKMRGGRLNAKTWEIFMEH 483
Query: 379 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 438
YL+ GD+K+A C ++A+ G G WVP T M +FE+ KDVDGAE ++ LKK
Sbjct: 484 YLKTGDLKMAHWCADRAMKKGHSSGRIWVPPPAVTETLMSYFEENKDVDGAERYVGALKK 543
Query: 439 AVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAICVE 490
DLG VFEPL+RTYAAAG+ P M +RLK+E VEV E + +LL++IC +
Sbjct: 544 VQKDLGAPVFEPLVRTYAAAGKKFPGMRQRLKIENVEVGEGTAQLLDSICAD 595
>gi|293336604|ref|NP_001168600.1| uncharacterized protein LOC100382384 [Zea mays]
gi|223949449|gb|ACN28808.1| unknown [Zea mays]
Length = 536
Score = 610 bits (1574), Expect = e-172, Method: Compositional matrix adjust.
Identities = 306/532 (57%), Positives = 374/532 (70%), Gaps = 50/532 (9%)
Query: 9 RTKNIAKRS-KKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRD 67
R K++A+RS KK++EEALY RLF+KGS+ +VR++++ FL S+KR FKWEVG ++++R
Sbjct: 4 RMKDVARRSTKKYVEEALYRRLFRKGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRRMRR 63
Query: 68 RKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYG 127
LY P+LKLSE M +RGMN TVSDQAI LDL+AK +GI AAE YF+DLPETSK HLTYG
Sbjct: 64 NALYRPSLKLSEVMARRGMNPTVSDQAIRLDLIAKSRGIAAAEKYFLDLPETSKTHLTYG 123
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 187
+LLN YCKELMTEKAE+L+EKMKELN F++M FNSLMT+Y K EK+P+IIQ+MKA
Sbjct: 124 ALLNSYCKELMTEKAESLMEKMKELNFAFTAMSFNSLMTMYTKVNQAEKVPSIIQDMKAD 183
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
++PD +TYNVWMRALAA+ DI G ERVIEEMKRDGRVA DWTT+SNLASIYVEAG+FEK
Sbjct: 184 DVLPDVFTYNVWMRALAALKDIPGVERVIEEMKRDGRVAPDWTTYSNLASIYVEAGMFEK 243
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 307
AE ALKELE RN D+ AYQFLITLYG+T NL EV+R+WRSL+ P AN+SYLNMIQ
Sbjct: 244 AEAALKELEKRNTSNDIEAYQFLITLYGRTQNLVEVHRVWRSLKRDNPRMANMSYLNMIQ 303
Query: 308 VLVNLKDLPGAEKCFKEWE-------------SGC------------------------- 329
VL NLKDL AE CFKEWE SG
Sbjct: 304 VLANLKDLSAAEACFKEWEARHIHPPKTNTKGSGADNTPGADPKSPSNPPNNQSGTKETG 363
Query: 330 -----------ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 378
YDIRV N MI AY EG L+ A +K+RA+ RG NAKTWEIF ++
Sbjct: 364 DETAEDLQPKHPKYDIRVANAMIKAYITEGMLDKAVAMKKRAKMRGGRLNAKTWEIFMEH 423
Query: 379 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 438
YL+ GD+K+A C ++A+ G G WVP T M +FE+ KDVDGAE ++ LKK
Sbjct: 424 YLKTGDLKMAHWCADRAMKKGHSSGRIWVPPPAVTETLMSYFEENKDVDGAERYVGALKK 483
Query: 439 AVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAICVE 490
DLG VFEPL+RTYAAAG+ P M +RLK+E VEV E + +LL++IC +
Sbjct: 484 VQKDLGAPVFEPLVRTYAAAGKKFPGMRQRLKIENVEVGEGTAQLLDSICAD 535
>gi|413953409|gb|AFW86058.1| hypothetical protein ZEAMMB73_674343 [Zea mays]
Length = 626
Score = 595 bits (1535), Expect = e-167, Method: Compositional matrix adjust.
Identities = 306/562 (54%), Positives = 374/562 (66%), Gaps = 80/562 (14%)
Query: 9 RTKNIAKRS-KKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRD 67
R K++A+RS KK++EEALY RLF+KGS+ +VR++++ FL S+KR FKWEVG ++++R
Sbjct: 64 RMKDVARRSTKKYVEEALYRRLFRKGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRRMRR 123
Query: 68 RKLYYPALK------------------------------LSENMEKRGMNKTVSDQAIHL 97
LY P+LK LSE M +RGMN TVSDQAI L
Sbjct: 124 NALYRPSLKPEQMQNTTPSQARGRCLGRAYALVQDCRLVLSEVMARRGMNPTVSDQAIRL 183
Query: 98 DLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFS 157
DL+AK +GI AAE YF+DLPETSK HLTYG+LLN YCKELMTEKAE+L+EKMKELN F+
Sbjct: 184 DLIAKSRGIAAAEKYFLDLPETSKTHLTYGALLNSYCKELMTEKAESLMEKMKELNFAFT 243
Query: 158 SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIE 217
+M FNSLMT+Y K EK+P+IIQ+MKA ++PD +TYNVWMRALAA+ DI G ERVIE
Sbjct: 244 AMSFNSLMTMYTKVNQAEKVPSIIQDMKADDVLPDVFTYNVWMRALAALKDIPGVERVIE 303
Query: 218 EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQT 277
EMKRDGRVA DWTT+SNLASIYVEAG+FEKAE ALKELE RN D+ AYQFLITLYG+T
Sbjct: 304 EMKRDGRVAPDWTTYSNLASIYVEAGMFEKAEAALKELEKRNTSNDIEAYQFLITLYGRT 363
Query: 278 GNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE----------- 326
NL EV+R+WRSL+ P AN+SYLNMIQVL NLKDL AE CFKEWE
Sbjct: 364 QNLVEVHRVWRSLKRDNPRMANMSYLNMIQVLANLKDLSAAEACFKEWEARHIHPPKTNT 423
Query: 327 --SGC------------------------------------ATYDIRVTNVMIGAYAKEG 348
SG YDIRV N MI AY EG
Sbjct: 424 KGSGADNTPGADPKSPSNPPNNQSGTKETGDETAEDLQPKHPKYDIRVANAMIKAYITEG 483
Query: 349 RLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVP 408
L+ A +K+RA+ RG NAKTWEIF ++YL+ GD+K+A C ++A+ G G WVP
Sbjct: 484 MLDKAVAMKKRAKMRGGRLNAKTWEIFMEHYLKTGDLKMAHWCADRAMKKGHSSGRIWVP 543
Query: 409 SSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRR 468
T M +FE+ KDVDGAE ++ LKK DLG VFEPL+RTYAAAG+ P M +R
Sbjct: 544 PPAVTETLMSYFEENKDVDGAERYVGALKKVQKDLGAPVFEPLVRTYAAAGKKFPGMRQR 603
Query: 469 LKMEKVEVSEASKKLLEAICVE 490
LK+E VEV E + +LL++IC +
Sbjct: 604 LKIENVEVGEGTAQLLDSICAD 625
>gi|356565994|ref|XP_003551220.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g60770-like [Glycine max]
Length = 469
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 288/443 (65%), Positives = 326/443 (73%), Gaps = 30/443 (6%)
Query: 48 KSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGID 107
+S R KWEV DTLKKL DRKLY ALKLSE M KR M KTV D AIHLDL+AK +GI
Sbjct: 57 RSTWRRRKWEVNDTLKKLDDRKLYQLALKLSETMAKRNMIKTVRDHAIHLDLLAKARGIT 116
Query: 108 AAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTL 167
AA+NYFV+LPE++KNHL +G++LNCYCKE M EKAE +EKMKEL+L SSMP+NSL+ L
Sbjct: 117 AAKNYFVNLPESAKNHLCHGAILNCYCKEPMIEKAEGFMEKMKELSLPLSSMPYNSLIML 176
Query: 168 YAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAA 227
Y K G PEK+ ++IQEMK S+IM DSYTYNVWMRALAAVNDIS ERV +EM
Sbjct: 177 YTKVGQPEKVSSLIQEMKTSNIMLDSYTYNVWMRALAAVNDISSVERVHDEMM------- 229
Query: 228 DWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW 287
AL ELE RNA +DL+AYQFLIT YG T NL EV+R+W
Sbjct: 230 -----------------------ALTELEKRNAFKDLTAYQFLITFYGXTSNLYEVFRVW 266
Query: 288 RSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKE 347
RSLRLAFP TANISYLNMI+VLV KDL G EKCF E E GC TYDIRV NV+I AYAK
Sbjct: 267 RSLRLAFPKTANISYLNMIRVLVKSKDLLGEEKCFXEXECGCPTYDIRVVNVLIRAYAKL 326
Query: 348 GRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWV 407
LE AEELKE ARRRGA PN KT EIF DYYL+ G+ K VDCL++AI GR +G KWV
Sbjct: 327 DMLEKAEELKEHARRRGAKPNGKTLEIFMDYYLQKGNFKSTVDCLDEAISMGRWNGEKWV 386
Query: 408 PSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLR 467
P S+ I MR+FEQEKDVDGAE FLEILKK+++ GVEVFE L RTYAA GR S MLR
Sbjct: 387 PXSKIIDIMMRNFEQEKDVDGAEEFLEILKKSMESPGVEVFESLTRTYAATGRISSAMLR 446
Query: 468 RLKMEKVEVSEASKKLLEAICVE 490
RLKME V+VSE ++KLLEAI E
Sbjct: 447 RLKMENVQVSEGTQKLLEAISEE 469
>gi|343172214|gb|AEL98811.1| pentatricopeptide repeat-containing protein, partial [Silene
latifolia]
Length = 359
Score = 545 bits (1404), Expect = e-152, Method: Compositional matrix adjust.
Identities = 251/359 (69%), Positives = 301/359 (83%)
Query: 71 YYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLL 130
YY ALKLS+ M +GMN T+SDQAIHLDL+ K G+ AAENYF+DLPE+SKN YG+LL
Sbjct: 1 YYAALKLSDTMAWKGMNMTISDQAIHLDLIGKTHGVAAAENYFIDLPESSKNIECYGALL 60
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
N YCKEL+ +KAEAL+EKMKEL L ++M +NSLMTLY+KTG PEK+PA++QEMKAS IM
Sbjct: 61 NIYCKELIPDKAEALMEKMKELGLPITAMSYNSLMTLYSKTGLPEKVPALVQEMKASDIM 120
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
+YTYNVWMRALAAV DI G ERV++EMKRDGRVA DWTT+SNLASIYVE+ +FEKAE
Sbjct: 121 LQTYTYNVWMRALAAVKDIYGVERVLDEMKRDGRVAEDWTTYSNLASIYVESKMFEKAEN 180
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
ALKELE RN +DLS YQFL+TLYG+TGNL EVYR+WRSLRLAFP T N++YLNMIQ LV
Sbjct: 181 ALKELEKRNTSQDLSPYQFLLTLYGKTGNLIEVYRVWRSLRLAFPKTPNVAYLNMIQRLV 240
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
LKDL GAEKCF +WES C YDIR+ NV++GAY K+G L+ A+ELK+RA +RGA PNAK
Sbjct: 241 TLKDLKGAEKCFADWESSCTNYDIRIANVLMGAYIKDGLLQQAKELKKRACKRGAKPNAK 300
Query: 371 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 429
TWEIF ++YL+ G++KLAVDC+E+A+ GRGDG KWVPSS+ + + M HFEQ KDVDGA
Sbjct: 301 TWEIFLEHYLKAGEVKLAVDCVERAVAIGRGDGSKWVPSSKVVNSIMGHFEQSKDVDGA 359
>gi|343172216|gb|AEL98812.1| pentatricopeptide repeat-containing protein, partial [Silene
latifolia]
Length = 359
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 248/359 (69%), Positives = 300/359 (83%)
Query: 71 YYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLL 130
YY ALKLS+ M +GMN T++DQAIHLDL+ K G+ AAENYF+DLPE+SKN YG+LL
Sbjct: 1 YYAALKLSDTMAWKGMNMTINDQAIHLDLIGKTHGVAAAENYFIDLPESSKNIECYGALL 60
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
N YCKEL+ +KAEAL+EKMKEL L ++M +NSLMTLY+KTG PEK+PA++QEMKAS IM
Sbjct: 61 NIYCKELIPDKAEALMEKMKELGLPITAMSYNSLMTLYSKTGLPEKVPALVQEMKASDIM 120
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
+YTYNVWMRALAAV DI G ERV++EMKRDGRVA DWTT+SNLASIYVE+ +F+KAE
Sbjct: 121 LQTYTYNVWMRALAAVKDIYGVERVLDEMKRDGRVAEDWTTYSNLASIYVESKMFDKAEN 180
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
ALKELE RN R+LS YQFL+TLYG+TGNL EVYR+WRSLRLAFP T N++YLNMIQ LV
Sbjct: 181 ALKELEKRNTSRELSPYQFLLTLYGKTGNLIEVYRLWRSLRLAFPKTPNVAYLNMIQRLV 240
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
LKDL GAEKCF +WES C YDIR+ NV++GAY K+G L+ A+ELK+RA +RGA PNAK
Sbjct: 241 TLKDLKGAEKCFADWESSCTNYDIRIANVLMGAYIKDGSLQQAKELKKRACKRGAKPNAK 300
Query: 371 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 429
TWEIF ++YL+ G++KLAVDC+E+A+ GRGDG KWVPS+ + + M HFEQ KDVDGA
Sbjct: 301 TWEIFLEHYLKAGEVKLAVDCVERAVAIGRGDGSKWVPSTNVVNSIMGHFEQSKDVDGA 359
>gi|449458295|ref|XP_004146883.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial-like [Cucumis sativus]
gi|449518825|ref|XP_004166436.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial-like [Cucumis sativus]
Length = 474
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/477 (44%), Positives = 302/477 (63%), Gaps = 10/477 (2%)
Query: 16 RSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPAL 75
RS + + LY RL G++ SV + +NQF+ V K+E+ +K+LR + Y+ L
Sbjct: 2 RSPANNQRGLYPRLSALGATGGSVAKTINQFIMEGNIVKKYELEKCIKELRKYRRYHHCL 61
Query: 76 KLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCK 135
++ E ME R +N + +D A+ LDL++KV G+ AAE YF DLP ++KN TYG+LLNCYCK
Sbjct: 62 QIMEWMETRKINYSFTDYALRLDLISKVNGVTAAEKYFYDLPPSAKNRCTYGALLNCYCK 121
Query: 136 ELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYT 195
E+M EKA L +KM EL + +S+ FN+LMT+Y + HPEK+P +I EMK ++T
Sbjct: 122 EMMEEKALTLFKKMDELKIS-TSLSFNNLMTMYMRMDHPEKVPPLIGEMKQRGFYLTTFT 180
Query: 196 YNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 255
YNVWM + A++NDI E ++EEMK + R DWTT+SNLAS YV+AG FEKAE ALK+L
Sbjct: 181 YNVWMNSCASLNDIGKVEEILEEMKMEDRNKFDWTTYSNLASFYVKAGQFEKAELALKKL 240
Query: 256 EN--RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLK 313
E ++ D Y LI+LY T NLSEV RIW +L+ + NISYL M+Q L LK
Sbjct: 241 EEEMKSDKNDRLVYHCLISLYASTSNLSEVNRIWNALKSVYSTMTNISYLVMLQALRKLK 300
Query: 314 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 373
D+ G ++ +KEWES C +D+R+ N +IGAY ++ E+A + E A +R P ++ E
Sbjct: 301 DIEGLKRTYKEWESNCRNFDLRIVNDIIGAYLQQDMYEDAAMIFEDATKRSKGPFSRARE 360
Query: 374 IFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 433
+F Y+L+ + A LE A+ + +W PS T F+ +FE+EKDV+GAE F
Sbjct: 361 MFMVYFLKLKQVDSAFSHLESALSESKEK--EWHPSLATTTAFLNYFEEEKDVEGAEDFA 418
Query: 434 EILK--KAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAIC 488
ILK K +D G + L++TY AAG+ +P M +RLK + +E+S ++LL +C
Sbjct: 419 RILKRLKCLDASG---YHLLLKTYVAAGKLAPDMRKRLKEDDIEISSELEELLGTVC 472
>gi|224064562|ref|XP_002301516.1| predicted protein [Populus trichocarpa]
gi|222843242|gb|EEE80789.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/476 (43%), Positives = 299/476 (62%), Gaps = 16/476 (3%)
Query: 25 LYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKR 84
+Y RL + G+S SV + LN+ + + K + +KKLR + A+++ E M+KR
Sbjct: 1 MYRRLSELGASGGSVSKTLNELILEGGKTSKINLTTCIKKLRKYGRFDHAIEVMEWMQKR 60
Query: 85 GMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEA 144
MN + D A++LDL AK +GI AAENYF +LP + +NH+TY +LLNCYCKELM+EKA
Sbjct: 61 KMNFSHVDHAVYLDLTAKTKGIAAAENYFDNLPPSVQNHVTYSTLLNCYCKELMSEKALT 120
Query: 145 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 204
L EKM ++ L +SMPFN+LMTL+ + G PEK+ I+QEMK + P ++TYN+WM++
Sbjct: 121 LFEKMDKMKLLSTSMPFNNLMTLHMRLGQPEKVLGIVQEMKQRGVSPGTFTYNIWMQSYG 180
Query: 205 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE-------- 256
+ND G +RV++EMK DG+ WTT+SNLA+IYV+AGLF+KAE AL++LE
Sbjct: 181 CLNDFEGVQRVLDEMKTDGKENFSWTTYSNLATIYVKAGLFDKAESALRKLEEQIECGRD 240
Query: 257 -----NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
R D AY FLI+LY T NLSEV+R+W SL+ +F T NISYLN++Q L
Sbjct: 241 CDFQKKRRHDADREAYHFLISLYAGTSNLSEVHRVWNSLKSSFRTTTNISYLNVLQALAK 300
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
LKD+ G KCFKEWES C +YD+ + NV I A + E A + + A +R K
Sbjct: 301 LKDVEGILKCFKEWESSCHSYDMGLANVAIRACLEHDMYEEAASIFDEALKRTKGLFFKA 360
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG 431
E+F ++L+N LA+ ++ A + +W P +T+ F+ +FE KDVDGAE
Sbjct: 361 REMFMVFFLKNHQPDLALKHMKAAFSEAKEI--EWQPDQKTVSAFLNYFEDGKDVDGAER 418
Query: 432 FLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAI 487
+I K+ ++ L + L++TY AAGR +P M +RL+ + +E++ + LLE +
Sbjct: 419 LCKIWKQ-INRLNSNAYILLLKTYTAAGRLAPEMRQRLEEDNIEINPELENLLERV 473
>gi|359480173|ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02370, mitochondrial-like [Vitis vinifera]
Length = 506
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/466 (43%), Positives = 301/466 (64%), Gaps = 5/466 (1%)
Query: 25 LYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKR 84
LY RL G++ SV LN+ +K K + K E+ +K+LR + + AL++ + ME R
Sbjct: 46 LYHRLSALGATGGSVADTLNEHIKEGKLIAKHELSSCIKQLRKYRQFQHALEIMDWMENR 105
Query: 85 GMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEA 144
+ + +D A+ LDL++K +G+ AE YF +L ++KN LTYG+LLNCYCKE M EKA A
Sbjct: 106 KIFFSYADYAVRLDLLSKTKGLATAEEYFNNLSPSAKNLLTYGTLLNCYCKEKMEEKALA 165
Query: 145 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 204
L EKM ELN +S+ FN+LM+L+ + G PE +P ++ EMK SI PD++TYN+ M++ A
Sbjct: 166 LFEKMDELNFASTSLTFNNLMSLHMRLGKPEMVPPLVDEMKKRSISPDTFTYNILMQSYA 225
Query: 205 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 264
+NDI GAERV+EE+KR+ WTT+SNLA++YV A LFEKAE ALK+LE D
Sbjct: 226 RLNDIEGAERVLEEIKRENEDKLSWTTYSNLAAVYVNARLFEKAELALKKLEEEMGFHDR 285
Query: 265 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 324
AY FLI+LY NLSEV R+W SL+ AFP T N+SY M+Q L NL D+ G + CF+E
Sbjct: 286 LAYHFLISLYAGINNLSEVNRVWNSLKSAFPKTNNMSYFIMLQALANLNDVDGLKICFEE 345
Query: 325 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 384
W+S C ++D+R+ NV + A+ +++AE + A +R + P ++F ++L+ +
Sbjct: 346 WKSSCFSFDVRLANVAVRAFLGWDMIKDAESILYEAVKRSSGPFYTALDMFMAHHLKVRE 405
Query: 385 MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLG 444
+ A+ +E A + + +W P+ E + F+++FE+EKDV+GAE F +ILK + L
Sbjct: 406 IDTALKYMEAAASEVKNN--EWQPAPERVLAFLKYFEEEKDVEGAEKFCKILKN-ISGLD 462
Query: 445 VEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAICVE 490
++ L++T AAGRT P M +R+K + +EV SK LL+ + E
Sbjct: 463 SNAYQLLLQTXVAAGRTEPEMRKRMKEDDIEVD--SKDLLQRVGPE 506
>gi|255548417|ref|XP_002515265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545745|gb|EEF47249.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/468 (42%), Positives = 299/468 (63%), Gaps = 5/468 (1%)
Query: 23 EALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENME 82
E LY +L G++ SV + LN+ + K + K E+ +++LR + + A ++ E ME
Sbjct: 38 EKLYHKLSALGATGGSVSRTLNEHIMEGKTITKIELSRCIRELRKYRRFDHAFEIMEWME 97
Query: 83 KRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLT-YGSLLNCYCKELMTEK 141
KR MN + +D+AI LDL+ K +GI AAE+YF L ++KNH T YG+LLNCYCKELM++K
Sbjct: 98 KRKMNFSYADRAIRLDLIGKARGIAAAEDYFNGLSPSAKNHHTSYGALLNCYCKELMSDK 157
Query: 142 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 201
A AL ++M E +SS+PFN+LM++Y + G PEK+P ++ EMK + P S+TYN+WM+
Sbjct: 158 ALALFQEMDEKKFLYSSLPFNNLMSMYMRLGQPEKVPPLVDEMKKRKVSPCSFTYNIWMQ 217
Query: 202 ALAAVNDISGAERVIEEMKRDG-RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 260
+ +ND G +RV+ E+ DG + WTT+SNLA+IY++AG+FEKAE ALK+LE
Sbjct: 218 SYGCLNDFQGVDRVLREIVNDGGKDNLQWTTYSNLATIYLKAGIFEKAESALKKLEAIMG 277
Query: 261 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 320
R+ AY FLI++Y TGN +EV R+W L+ +F N+SYL M+Q L LKD+ G K
Sbjct: 278 FRNREAYHFLISIYAGTGNSNEVNRVWGLLKSSFNMINNLSYLVMLQALAKLKDVEGVAK 337
Query: 321 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 380
CF+EWESGC YD+R+ NV I + + E AE + + A +R P K E F ++L
Sbjct: 338 CFREWESGCTNYDMRIANVAIRVFLQHDMYEEAELIFDDALKRTRGPFFKARERFMLFFL 397
Query: 381 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 440
+ + LA+ + A + +W P ET+ + +F EKDVDGAE +ILK +
Sbjct: 398 KIHQLDLALKHMRAAF--SESEKHEWKPLQETVNAYFDYFRTEKDVDGAEKLSKILKH-I 454
Query: 441 DDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAIC 488
+ L V+ L++TY AAG+ +P M +RL+ + +E+S+ + LLE++C
Sbjct: 455 NCLNSSVYSLLLKTYIAAGKLAPEMRQRLEEDNIEISDELEYLLESVC 502
>gi|225450579|ref|XP_002277733.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial [Vitis vinifera]
gi|296089781|emb|CBI39600.3| unnamed protein product [Vitis vinifera]
Length = 498
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/489 (41%), Positives = 308/489 (62%), Gaps = 7/489 (1%)
Query: 1 MAMPQRFGRTKNIAKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGD 60
+A P+ F A + K E +LY +L ++ V + L++++K K V ++++
Sbjct: 14 VATPRWFSTATATAAKDK---EASLYWKLSALRGTEGDVAETLDKWVKEGKSVKRFDMIS 70
Query: 61 TLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS 120
+ +LR K Y A ++ E MEK + +D+AI +DL+AK +GI AENYF L E++
Sbjct: 71 CVNQLRRFKKYKHAAQIYEWMEKSKNDLNNADRAIRIDLLAKTEGIAQAENYFNSLQESA 130
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
K + TYG+LLNCYCKE M +KA L +K+KELN S++ +N++++LY + G PEK+P++
Sbjct: 131 KTNKTYGALLNCYCKENMLDKAVELFKKLKELNFVSSALSYNNMISLYLRVGQPEKVPSL 190
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
+ EM+ I D YTYN+ M + A+V D E+V+++MK+ G V DW T+ NLA+IYV
Sbjct: 191 VHEMEEKDIPADLYTYNLLMNSYASVKDFEAVEQVLDKMKKRG-VERDWFTYGNLANIYV 249
Query: 241 EAGLFEKAERALKELE-NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
+AG +KA AL++LE N+N H D A++ LI LY +T NL V R W SL+LA P N
Sbjct: 250 DAGHTKKANYALQKLEQNKNLH-DPEAFRMLINLYARTSNLEGVNRAWESLKLAHPKINN 308
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
SYL M+ L L D+ G EKCFKEWESGC+TYD+R++NVM+ +Y +E A L E
Sbjct: 309 KSYLIMLLALSKLGDVAGLEKCFKEWESGCSTYDVRLSNVMLESYLNREIIEEANLLSES 368
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
+RG + KT ++F +YL+ + LA+ L+ + KW P+ ETI F+ +
Sbjct: 369 IAKRGPELKLKTLDLFMKFYLKKHQLDLAMKYLDMGASKADPENNKWFPTEETITMFLEY 428
Query: 420 FEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEA 479
FE+ KDVD AE F E ++K + L ++++ L+RTY AAG+ P+M R+K + +E+S
Sbjct: 429 FEEVKDVDSAEKFCETMRK-ISRLDSKIYDSLLRTYIAAGKEEPLMSERMKDDGIEISSE 487
Query: 480 SKKLLEAIC 488
++KLL+ +C
Sbjct: 488 TEKLLQKVC 496
>gi|147819856|emb|CAN71816.1| hypothetical protein VITISV_023421 [Vitis vinifera]
Length = 494
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/471 (42%), Positives = 301/471 (63%), Gaps = 4/471 (0%)
Query: 19 KHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLS 78
K E +LY +L ++ V + L++++K K V ++++ + +LR K Y A ++
Sbjct: 25 KDKEASLYWKLSALRGTEGDVAETLDKWVKEGKSVKRFDMISCVNQLRRFKKYKHAAQIY 84
Query: 79 ENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELM 138
E MEK + +D+AI +DL+AK +GI AENYF L E++K + TYG+LLNCYCKE M
Sbjct: 85 EWMEKSKNDLNNADRAIRIDLLAKTEGIAQAENYFNSLQESAKTNKTYGALLNCYCKENM 144
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
+KA L +K+KELN S++ +N++++LY + G PEK+P+++ EM+ I D YTYN+
Sbjct: 145 VDKAVELFKKLKELNFVSSALSYNNMISLYLRVGQPEKVPSLVHEMEEKDIPADLYTYNL 204
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE-N 257
M + A+V D E+V+E+MK+ G V DW T+ NLA+IYV+AG +KA AL++LE N
Sbjct: 205 LMNSYASVKDFEAVEQVLEKMKKRG-VERDWFTYGNLANIYVDAGHTKKANYALQKLEQN 263
Query: 258 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 317
+N H D A++ LI LY +T NL V R W SL+LA P N SYL M+ L L D+ G
Sbjct: 264 KNLH-DPEAFRMLINLYARTSNLEGVNRAWESLKLAHPKINNKSYLIMLLALSKLGDVAG 322
Query: 318 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 377
EKCFKEWESGC+TYD+R++NVM+ +Y +E A L E +RG + KT ++F
Sbjct: 323 LEKCFKEWESGCSTYDVRLSNVMLESYLNREMIEEANLLSESIAKRGPELKLKTLDLFMK 382
Query: 378 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 437
+YL+ + LA+ L+ + KW P+ ETI F+ +FE+ KDVD AE F E ++
Sbjct: 383 FYLKKHQLDLAMKYLDMGASKADPENNKWFPTEETITMFLEYFEEVKDVDSAEKFCETMR 442
Query: 438 KAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAIC 488
K + L ++++ L+RTY AAG+ P+M R+K + +E+S ++KLL+ +C
Sbjct: 443 K-ISRLDSKIYDSLLRTYIAAGKEEPLMSERMKDDGIEISSETEKLLQKVC 492
>gi|297843032|ref|XP_002889397.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335239|gb|EFH65656.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 524
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/467 (42%), Positives = 285/467 (61%), Gaps = 6/467 (1%)
Query: 25 LYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKR 84
LY +L K + +V + LNQF+ V K ++ K LR + + AL++ + MEKR
Sbjct: 60 LYKKLSKLSVAGGTVAETLNQFIMEGITVRKVDLFRCAKDLRKFRRHQHALEIFDWMEKR 119
Query: 85 GMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHL-TYGSLLNCYCKELMTEKAE 143
M +VSD AI LDL+AK +G++AAENYF +L ++KNH TYG+L+NCYC EL KA+
Sbjct: 120 KMTFSVSDHAIRLDLIAKAKGLEAAENYFNNLDPSAKNHQSTYGALMNCYCVELEEGKAK 179
Query: 144 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 203
A EKM ELN +S+PFN++M++Y + PEK+P ++ MK I P TY++WM++
Sbjct: 180 AHFEKMDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAMKQRGISPCGVTYSIWMQSC 239
Query: 204 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 263
++ND+ G E++I+EM +D W TFSNLA+I+ +AGL+EKAE ALK +E + +
Sbjct: 240 GSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIFTKAGLYEKAESALKSMEKKMNPNN 299
Query: 264 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 323
++ FLI+LY +EVYR+W SL+ A P N+SYL M+Q + L D+ G +K F
Sbjct: 300 RDSHHFLISLYAGISKGTEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDIDGIKKIFT 359
Query: 324 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
EWES C YD+R+ N+ I Y K E AE++ + A + P +K ++ + L NG
Sbjct: 360 EWESKCWAYDMRLANIAINTYLKGNMYEEAEKILDGAMEKSKGPFSKARQLLMIHLLENG 419
Query: 384 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK--KAVD 441
LA+ LE A+ + +W SSE + F HF++ KDVDGAE F +IL K VD
Sbjct: 420 KADLAMKHLETAVSDPAENKDEWSWSSELVSLFFLHFKRAKDVDGAEDFCKILSNWKPVD 479
Query: 442 DLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAIC 488
E LI+TYAAA +T P M RL ++EVSE + LL+ +C
Sbjct: 480 ---CETMSFLIKTYAAAEKTCPDMRERLSQHQIEVSEEIQDLLKTVC 523
>gi|224130976|ref|XP_002320971.1| predicted protein [Populus trichocarpa]
gi|222861744|gb|EEE99286.1| predicted protein [Populus trichocarpa]
Length = 473
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 193/464 (41%), Positives = 292/464 (62%), Gaps = 6/464 (1%)
Query: 25 LYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKR 84
LY RL + G+S SV + LN F+ + K ++ +++LR + A+++ E M+KR
Sbjct: 15 LYKRLSELGASGESVSKTLNDFVLEGGKTNKVDLLACIRELRKYGRFDYAIEVMEWMQKR 74
Query: 85 GMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEA 144
MN + A++LDL+AK +GI AAENYF L + +NH T+G+LL+CYC+ELM+EKA
Sbjct: 75 KMNVS---HAVYLDLIAKKEGIAAAENYFDGLSPSEQNHSTHGALLSCYCRELMSEKALT 131
Query: 145 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 204
L EKM ++ +S+PFN+L++L+ + PEK+ I+QEMK + P ++TYN+WM++
Sbjct: 132 LFEKMDKMKFLLTSLPFNNLISLHLRLDQPEKVLPIVQEMKQKGVSPCTFTYNMWMQSYG 191
Query: 205 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 264
+ND G ERV++EMK DG+ WTT++NLA+IYV+AG F+KAE ALK++E +
Sbjct: 192 CLNDFEGVERVLDEMKMDGQKNFSWTTYTNLATIYVKAGHFDKAESALKKVEEQIERDYR 251
Query: 265 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 324
AY FLITLY T NL EV R+W SL+ F T N+SYL M+ L LKD+ G KCFKE
Sbjct: 252 EAYHFLITLYAGTSNLGEVNRVWNSLKSNFHTTTNVSYLTMLHTLAKLKDVEGLLKCFKE 311
Query: 325 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 384
WES C +YD+R+ NV I A + E A + + A +R E+F ++L+N
Sbjct: 312 WESSCHSYDMRLANVAIRACLEHDMYEEAALIFDDALKRTEGLFFNAREMFMVFFLKNHQ 371
Query: 385 MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLG 444
+ LA+ ++ A + +W P +T+ F +FE EKDV+GAE +ILK ++ L
Sbjct: 372 LDLALKHMKAAFSEVKEI--EWQPEPKTVSAFFAYFEDEKDVNGAERLCKILKH-INRLD 428
Query: 445 VEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAIC 488
++ L++TY AAG+ +P M +RL+ + +E++ + LLE +C
Sbjct: 429 SNAYDLLLKTYIAAGKLAPEMRQRLEEDGIEINPELENLLERVC 472
>gi|297743994|emb|CBI36964.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 183/413 (44%), Positives = 271/413 (65%), Gaps = 2/413 (0%)
Query: 25 LYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKR 84
LY RL G++ SV LN+ +K K + K E+ +K+LR + + AL++ + ME R
Sbjct: 85 LYHRLSALGATGGSVADTLNEHIKEGKLIAKHELSSCIKQLRKYRQFQHALEIMDWMENR 144
Query: 85 GMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEA 144
+ + +D A+ LDL++K +G+ AE YF +L ++KN LTYG+LLNCYCKE M EKA A
Sbjct: 145 KIFFSYADYAVRLDLLSKTKGLATAEEYFNNLSPSAKNLLTYGTLLNCYCKEKMEEKALA 204
Query: 145 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 204
L EKM ELN +S+ FN+LM+L+ + G PE +P ++ EMK SI PD++TYN+ M++ A
Sbjct: 205 LFEKMDELNFASTSLTFNNLMSLHMRLGKPEMVPPLVDEMKKRSISPDTFTYNILMQSYA 264
Query: 205 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 264
+NDI GAERV+EE+KR+ WTT+SNLA++YV A LFEKAE ALK+LE D
Sbjct: 265 RLNDIEGAERVLEEIKRENEDKLSWTTYSNLAAVYVNARLFEKAELALKKLEEEMGFHDR 324
Query: 265 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 324
AY FLI+LY NLSEV R+W SL+ AFP T N+SY M+Q L NL D+ G + CF+E
Sbjct: 325 LAYHFLISLYAGINNLSEVNRVWNSLKSAFPKTNNMSYFIMLQALANLNDVDGLKICFEE 384
Query: 325 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 384
W+S C ++D+R+ NV + A+ +++AE + A +R + P ++F ++L+ +
Sbjct: 385 WKSSCFSFDVRLANVAVRAFLGWDMIKDAESILYEAVKRSSGPFYTALDMFMAHHLKVRE 444
Query: 385 MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 437
+ A+ +E A + + +W P+ E + F+++FE+EKDV+GAE F +ILK
Sbjct: 445 IDTALKYMEAAASEVKNN--EWQPAPERVLAFLKYFEEEKDVEGAEKFCKILK 495
>gi|15217734|ref|NP_171739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173342|sp|Q9FZ24.1|PPR4_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g02370, mitochondrial; Flags: Precursor
gi|9857533|gb|AAG00888.1|AC064879_6 Hypothetical protein [Arabidopsis thaliana]
gi|332189300|gb|AEE27421.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 195/482 (40%), Positives = 286/482 (59%), Gaps = 2/482 (0%)
Query: 8 GRTKNIAKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRD 67
G ++A + + LY +L + +V + LNQF+ V K ++ K LR
Sbjct: 56 GVRTSVAAPTVASRQRELYKKLSMLSVTGGTVAETLNQFIMEGITVRKDDLFRCAKTLRK 115
Query: 68 RKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHL-TY 126
+ A ++ + MEKR M +VSD AI LDL+ K +G++AAENYF +L ++KNH TY
Sbjct: 116 FRRPQHAFEIFDWMEKRKMTFSVSDHAICLDLIGKTKGLEAAENYFNNLDPSAKNHQSTY 175
Query: 127 GSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKA 186
G+L+NCYC EL EKA+A E M ELN +S+PFN++M++Y + PEK+P ++ MK
Sbjct: 176 GALMNCYCVELEEEKAKAHFEIMDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAMKQ 235
Query: 187 SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE 246
I P TY++WM++ ++ND+ G E++I+EM +D W TFSNLA+IY +AGL+E
Sbjct: 236 RGISPCGVTYSIWMQSCGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIYTKAGLYE 295
Query: 247 KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI 306
KA+ ALK +E + + ++ FL++LY EVYR+W SL+ A P N+SYL M+
Sbjct: 296 KADSALKSMEEKMNPNNRDSHHFLMSLYAGISKGPEVYRVWESLKKARPEVNNLSYLVML 355
Query: 307 QVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD 366
Q + L DL G +K F EWES C YD+R+ N+ I Y K E AE++ + A ++
Sbjct: 356 QAMSKLGDLDGIKKIFTEWESKCWAYDMRLANIAINTYLKGNMYEEAEKILDGAMKKSKG 415
Query: 367 PNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDV 426
P +K ++ + L N LA+ LE A+ + +W SSE + F HFE+ KDV
Sbjct: 416 PFSKARQLLMIHLLENDKADLAMKHLEAAVSDSAENKDEWGWSSELVSLFFLHFEKAKDV 475
Query: 427 DGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEA 486
DGAE F +IL L E LI+TYAAA +TSP M RL +++EVSE + LL+
Sbjct: 476 DGAEDFCKILSN-WKPLDSETMTFLIKTYAAAEKTSPDMRERLSQQQIEVSEEIQDLLKT 534
Query: 487 IC 488
+C
Sbjct: 535 VC 536
>gi|17529324|gb|AAL38889.1| unknown protein [Arabidopsis thaliana]
Length = 537
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 194/482 (40%), Positives = 286/482 (59%), Gaps = 2/482 (0%)
Query: 8 GRTKNIAKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRD 67
G ++A + + LY +L + +V + LNQF+ V K ++ K LR
Sbjct: 56 GVRTSVAAPTVASRQRELYKKLSMLSVTGGTVAETLNQFIMEGITVRKDDLFRCAKTLRK 115
Query: 68 RKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHL-TY 126
+ A ++ + MEKR M +VSD AI LDL+ K +G++AAENYF +L ++KNH TY
Sbjct: 116 FRRPQHAFEIFDWMEKRKMTFSVSDHAICLDLIGKTKGLEAAENYFNNLDPSAKNHQSTY 175
Query: 127 GSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKA 186
G+L+NCYC EL EKA+A E M ELN +S+PFN++M++Y + PEK+P ++ +K
Sbjct: 176 GALMNCYCVELEEEKAKAHFEIMDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAIKQ 235
Query: 187 SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE 246
I P TY++WM++ ++ND+ G E++I+EM +D W TFSNLA+IY +AGL+E
Sbjct: 236 RGISPCGVTYSIWMQSCGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIYTKAGLYE 295
Query: 247 KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI 306
KA+ ALK +E + + ++ FL++LY EVYR+W SL+ A P N+SYL M+
Sbjct: 296 KADSALKSMEEKMNPNNRDSHHFLMSLYAGISKGPEVYRVWESLKKARPEVNNLSYLVML 355
Query: 307 QVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD 366
Q + L DL G +K F EWES C YD+R+ N+ I Y K E AE++ + A ++
Sbjct: 356 QAMSKLGDLDGIKKIFTEWESKCWAYDMRLANIAINTYLKGNMYEEAEKILDGAMKKSKG 415
Query: 367 PNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDV 426
P +K ++ + L N LA+ LE A+ + +W SSE + F HFE+ KDV
Sbjct: 416 PFSKARQLLMIHLLENDKADLAMKHLEAAVSDSAENKDEWGWSSELVSLFFLHFEKAKDV 475
Query: 427 DGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEA 486
DGAE F +IL L E LI+TYAAA +TSP M RL +++EVSE + LL+
Sbjct: 476 DGAEDFCKILSN-WKPLDSETMTFLIKTYAAAEKTSPDMRERLSQQQIEVSEEIQDLLKT 534
Query: 487 IC 488
+C
Sbjct: 535 VC 536
>gi|395146485|gb|AFN53641.1| pentatricopeptide repeat-containing protein [Linum usitatissimum]
Length = 516
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 190/472 (40%), Positives = 288/472 (61%), Gaps = 7/472 (1%)
Query: 25 LYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKR 84
LY RL G++ +V + LN ++ + K E+ +K+LR + L++ E MEKR
Sbjct: 46 LYRRLSALGATGGTVDKVLNDYVMDGMSIRKVELMRCVKELRKYGRFNHGLEIMEWMEKR 105
Query: 85 GMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEA 144
G+N D A+ LDL+ K +GI AENYF L ++KN TYGSLLN YCK+L +EKA
Sbjct: 106 GINLGHGDLAVRLDLICKTKGITEAENYFNGLVPSAKNPATYGSLLNSYCKKLDSEKALQ 165
Query: 145 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 204
L +KM +L +S+PFN+LM++Y + G EK+P ++ +MK ++ P ++TYN+W+++L
Sbjct: 166 LFQKMDKLKFFRNSLPFNNLMSMYMRLGQQEKVPELVSQMKQMNLPPCTFTYNIWIQSLG 225
Query: 205 AVNDISGAERVIEEMKRDGRVAA--DWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 262
+ D G ++V+EEM+ D +WTT+SNLA++Y AG FE+A+ ALK +E R
Sbjct: 226 HMRDFEGIKKVLEEMRNDVNFGNNFNWTTYSNLAAVYTSAGEFERAKLALKMMEERIDSH 285
Query: 263 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 322
D +AY FL+TLYG +L EV+R+W L+ F N SYL M+Q L LKD+ G K F
Sbjct: 286 DRNAYHFLLTLYGGIADLEEVHRVWGCLKAKFNQVTNASYLVMLQALARLKDVEGISKVF 345
Query: 323 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 382
+EWES C +YD+RV NV I Y ++G AE + + A R P KT E+ L+
Sbjct: 346 EEWESVCTSYDMRVANVAIRVYLEKGMYNEAEAVFDGAMERTPGPYFKTREMLMVSLLKR 405
Query: 383 GDMKLAVDCLEKAI-DTGRGDGG---KWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 438
++ A+ ++ A + G+ + G +W PS+E + F +FE+EKDV+GAE +IL K
Sbjct: 406 RQLEPALKQMKAAFTEVGQNEKGHEKEWRPSAEIVNAFFGYFEEEKDVEGAEKMWKIL-K 464
Query: 439 AVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAICVE 490
++ V+ L++TY AAG+++ M RL + VEV E ++LL+ +C E
Sbjct: 465 CINRCDSTVYRLLMKTYIAAGKSAVDMRTRLAEDAVEVDEEIQRLLDVVCPE 516
>gi|297809953|ref|XP_002872860.1| hypothetical protein ARALYDRAFT_490379 [Arabidopsis lyrata subsp.
lyrata]
gi|297318697|gb|EFH49119.1| hypothetical protein ARALYDRAFT_490379 [Arabidopsis lyrata subsp.
lyrata]
Length = 500
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 196/480 (40%), Positives = 286/480 (59%), Gaps = 12/480 (2%)
Query: 12 NIAKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLY 71
++ ++KK+ ++Y +L G+ + + LNQ + V K E+ K LR +
Sbjct: 29 SVPTKAKKN--PSVYKKLSSLGTRGGKMEETLNQLVMEGVPVKKHELIRYAKDLRKFRQP 86
Query: 72 YPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLN 131
AL++ E ME++ + T SD AI LDL+AK +G++AAE YF L ++ KN TYGSLLN
Sbjct: 87 QRALEIFEWMERKEIVFTGSDHAIRLDLIAKTKGLEAAETYFNSLNDSIKNQSTYGSLLN 146
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CYC E +KA+A E M +LN +S+PFN+LM +Y + G EK+PA++ MK +I P
Sbjct: 147 CYCVEKEEDKAKAHFENMVDLNHVSNSLPFNNLMAMYLRIGQSEKVPALVVAMKQKNITP 206
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
TY++W+++ ++ D+ G E+V++EMK +G + W TF+NLA+IY++ GL++KAE A
Sbjct: 207 CDITYSMWIQSCGSLKDLDGVEKVLDEMKAEGEGISSWDTFANLAAIYIKVGLYDKAEEA 266
Query: 252 LKELENR-NAH-RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 309
LK LEN+ N H RD Y FLI+LY N SEVYR+W L+ PN N SYL M+Q L
Sbjct: 267 LKSLENKMNPHIRD--CYHFLISLYAGIANASEVYRVWDLLKKRHPNVNNSSYLTMLQAL 324
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
L D+ G +K F EWES C TYD+R+ NV I +Y K+ E AE + A + +
Sbjct: 325 SKLNDIDGIKKIFTEWESTCWTYDMRMANVAISSYLKQNMYEEAEAVFNGAMTKCKGQFS 384
Query: 370 KTWEIFSDYYLRNGDMKLAVDCLEKAI-DTGRGDGGKWVPSSETIRTFMRHFEQEKDVDG 428
K ++ + L+N LA+ E A+ D + W SSE I +F HFE+ KDVDG
Sbjct: 385 KARQLLMMHLLKNDQADLALKHFEAAVLDLDKN----WTWSSELISSFFLHFEEAKDVDG 440
Query: 429 AEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAIC 488
AE F + L K LG E + L++TY +A + P M +RL+ + ++V E LL IC
Sbjct: 441 AEEFCKTLTK-WSPLGSETYTLLMKTYLSAEKACPDMKKRLEEQGIQVDEEQDCLLSKIC 499
>gi|18411800|ref|NP_567220.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75163252|sp|Q93WC5.1|PP300_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g01990, mitochondrial; Flags: Precursor
gi|14517494|gb|AAK62637.1| AT4g01990/T7B11_26 [Arabidopsis thaliana]
gi|16323354|gb|AAL15390.1| AT4g01990/T7B11_26 [Arabidopsis thaliana]
gi|332656708|gb|AEE82108.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 502
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 196/480 (40%), Positives = 284/480 (59%), Gaps = 11/480 (2%)
Query: 12 NIAKRSKKHLEEALYDRLFKKGS-SDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKL 70
++ ++KKH ++Y +L G+ + + LNQF+ V K ++ K LR +
Sbjct: 30 SVPTKAKKH--RSIYKKLSSLGTRGGGKMEETLNQFVMEGVPVKKHDLIRYAKDLRKFRQ 87
Query: 71 YYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLL 130
AL++ E ME++ + T SD AI L+L+AK +G++AAE YF L ++ KN TYGSLL
Sbjct: 88 PQRALEIFEWMERKEIAFTGSDHAIRLNLIAKSKGLEAAETYFNSLDDSIKNQSTYGSLL 147
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
NCYC E KA+A E M +LN +S+PFN+LM +Y G PEK+PA++ MK SI
Sbjct: 148 NCYCVEKEEVKAKAHFENMVDLNHVSNSLPFNNLMAMYMGLGQPEKVPALVVAMKEKSIT 207
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
P TY++W+++ ++ D+ G E+V++EMK +G W TF+NLA+IY++ GL+ KAE
Sbjct: 208 PCDITYSMWIQSCGSLKDLDGVEKVLDEMKAEGEGIFSWNTFANLAAIYIKVGLYGKAEE 267
Query: 251 ALKELENRNAHRDL-SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 309
ALK LEN N + D+ Y FLI LY N SEVYR+W L+ +PN N SYL M++ L
Sbjct: 268 ALKSLEN-NMNPDVRDCYHFLINLYTGIANASEVYRVWDLLKKRYPNVNNSSYLTMLRAL 326
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
L D+ G +K F EWES C TYD+R+ NV I +Y K+ E AE + A ++ +
Sbjct: 327 SKLDDIDGVKKVFAEWESTCWTYDMRMANVAISSYLKQNMYEEAEAVFNGAMKKCKGQFS 386
Query: 370 KTWEIFSDYYLRNGDMKLAVDCLEKAI-DTGRGDGGKWVPSSETIRTFMRHFEQEKDVDG 428
K ++ + L+N LA+ E A+ D + W SSE I +F HFE+ KDVDG
Sbjct: 387 KARQLLMMHLLKNDQADLALKHFEAAVLDQDKN----WTWSSELISSFFLHFEEAKDVDG 442
Query: 429 AEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAIC 488
AE F + L K L E + L++TY AAG+ P M +RL+ + + V E + LL IC
Sbjct: 443 AEEFCKTLTK-WSPLSSETYTLLMKTYLAAGKACPDMKKRLEEQGILVDEEQECLLSKIC 501
>gi|4558568|gb|AAD22661.1|AC007138_25 hypothetical protein [Arabidopsis thaliana]
gi|7268583|emb|CAB80692.1| hypothetical protein [Arabidopsis thaliana]
Length = 501
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 196/480 (40%), Positives = 284/480 (59%), Gaps = 11/480 (2%)
Query: 12 NIAKRSKKHLEEALYDRLFKKGS-SDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKL 70
++ ++KKH ++Y +L G+ + + LNQF+ V K ++ K LR +
Sbjct: 29 SVPTKAKKH--RSIYKKLSSLGTRGGGKMEETLNQFVMEGVPVKKHDLIRYAKDLRKFRQ 86
Query: 71 YYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLL 130
AL++ E ME++ + T SD AI L+L+AK +G++AAE YF L ++ KN TYGSLL
Sbjct: 87 PQRALEIFEWMERKEIAFTGSDHAIRLNLIAKSKGLEAAETYFNSLDDSIKNQSTYGSLL 146
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
NCYC E KA+A E M +LN +S+PFN+LM +Y G PEK+PA++ MK SI
Sbjct: 147 NCYCVEKEEVKAKAHFENMVDLNHVSNSLPFNNLMAMYMGLGQPEKVPALVVAMKEKSIT 206
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
P TY++W+++ ++ D+ G E+V++EMK +G W TF+NLA+IY++ GL+ KAE
Sbjct: 207 PCDITYSMWIQSCGSLKDLDGVEKVLDEMKAEGEGIFSWNTFANLAAIYIKVGLYGKAEE 266
Query: 251 ALKELENRNAHRDL-SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 309
ALK LEN N + D+ Y FLI LY N SEVYR+W L+ +PN N SYL M++ L
Sbjct: 267 ALKSLEN-NMNPDVRDCYHFLINLYTGIANASEVYRVWDLLKKRYPNVNNSSYLTMLRAL 325
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
L D+ G +K F EWES C TYD+R+ NV I +Y K+ E AE + A ++ +
Sbjct: 326 SKLDDIDGVKKVFAEWESTCWTYDMRMANVAISSYLKQNMYEEAEAVFNGAMKKCKGQFS 385
Query: 370 KTWEIFSDYYLRNGDMKLAVDCLEKAI-DTGRGDGGKWVPSSETIRTFMRHFEQEKDVDG 428
K ++ + L+N LA+ E A+ D + W SSE I +F HFE+ KDVDG
Sbjct: 386 KARQLLMMHLLKNDQADLALKHFEAAVLDQDKN----WTWSSELISSFFLHFEEAKDVDG 441
Query: 429 AEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAIC 488
AE F + L K L E + L++TY AAG+ P M +RL+ + + V E + LL IC
Sbjct: 442 AEEFCKTLTK-WSPLSSETYTLLMKTYLAAGKACPDMKKRLEEQGILVDEEQECLLSKIC 500
>gi|148909871|gb|ABR18022.1| unknown [Picea sitchensis]
Length = 561
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 177/476 (37%), Positives = 283/476 (59%), Gaps = 8/476 (1%)
Query: 14 AKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYP 73
+++ + L + LY R+ + G S ++L +++ + V KW + + +++LR +
Sbjct: 85 TQKTSESLPDNLYRRISRLGDPKRSAVEELERWITEGREVKKWVLREIVRELRKYYRHKH 144
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCY 133
AL++ E M K+ +V D+A+HL L+AKV GI +AE Y+VDL KNHLTY +LLNCY
Sbjct: 145 ALEVFEWMSKK-FPCSVGDRAMHLGLIAKVHGIASAEKYYVDLHHYEKNHLTYFALLNCY 203
Query: 134 CKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDS 193
+E EK+EA++E++K+L ++ P+ +MTLY T EK+P +IQEMK I D
Sbjct: 204 VQEKNIEKSEAIMEELKDLGFIKTAFPYTEMMTLYMNTEQFEKVPLVIQEMKKKGISLDI 263
Query: 194 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 253
+ YN+WMR+ AA++D+ V E++RD + DW+ +S LA+IY+ A + +KA ALK
Sbjct: 264 HCYNIWMRSYAALSDMDQVAEVFNEIERDDNINTDWSIYSTLANIYINAKVLDKAGSALK 323
Query: 254 ELENR----NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 309
E+EN+ +D AY LI+L+G+ GN EVYRIW+S LAFP N SY+ ++ L
Sbjct: 324 EMENKMKEIETKKDQLAYNHLISLHGRLGNKDEVYRIWQSFELAFPKMTNRSYVCLLSSL 383
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
V + D+ GAE K+WES D R+ ++ AY ++G L+ AE L ER +G PNA
Sbjct: 384 VGMGDIEGAEVFIKKWESMKTFDDSRIYYALLNAYIEKGWLQKAELLLERVVDKGGKPNA 443
Query: 370 KTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 429
KTWE ++ Y++N + A++ +++++ W P S + ++HFE++ DV A
Sbjct: 444 KTWETLAEGYIQNEQIHKAMEAMKRSLSI--EGNSPWQPKSVNVLALLKHFEKQGDVKSA 501
Query: 430 EGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLE 485
E F +IL + V + E++ L+RTY G+ P + + + V E + LL+
Sbjct: 502 EEFFKIL-RGVKFVSTEIYNSLLRTYVYVGKVPPRISELMLEDNVSPDEETDNLLK 556
>gi|357131918|ref|XP_003567580.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01990,
mitochondrial-like [Brachypodium distachyon]
Length = 545
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 195/487 (40%), Positives = 292/487 (59%), Gaps = 13/487 (2%)
Query: 2 AMPQRFGRTKNIAKRSKKHLEEALYDRLFKKGSS-DVSVRQQLNQFLKSKKRVFKWEVGD 60
A P K + K S+ LY RL G++ + SV + LN++++ + ++
Sbjct: 62 AHPVAVDANKAVTKDSR-----PLYRRLSALGNAGEGSVSRVLNKWVREGREARSVDLER 116
Query: 61 TLKKLRDRKLYYPALKLSENM-EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET 119
+K+LR K + AL+L + M +GMN + ++ AI LDLV KV+GI+AAE YF LP+
Sbjct: 117 YVKELRKYKRHAQALELMDWMVHTKGMNMSYTNHAIRLDLVYKVRGIEAAEKYFNGLPDP 176
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
+KNH TYG+LLNCYC EKA L KM +L + S++PFN+LM+LY K G +K+
Sbjct: 177 AKNHRTYGALLNCYCSSKKEEKATDLFHKMDDLGIASSTLPFNNLMSLYMKLGQHKKVAG 236
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+ +EMKA ++ PD+ T V M + AA+N I E V++EM+ + A W+ +S LASIY
Sbjct: 237 LFEEMKAKNVKPDNLTCCVLMTSYAALNKIDAVEEVLKEME-EKNAALGWSAYSTLASIY 295
Query: 240 VEAGLFEKAERALKELENRNAHRD-LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
V AGL EKAE ALK+LE RD + FL++LY GNLSEV R+W ++ FP
Sbjct: 296 VSAGLVEKAESALKKLEGLVQPRDGRQPFDFLMSLYASVGNLSEVNRVWDVVKATFPKVT 355
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
N SY +M+Q L L D ++ F+EWES YD+++TN+M A+ K G + AE L E
Sbjct: 356 NTSYFSMLQALYKLNDADRIKQIFEEWESNHECYDVKLTNIMTRAHLKNGLTKEAELLWE 415
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 418
+A+ +GAD ++KT E+F D+Y+ DMK A+ +E + G E I+ F +
Sbjct: 416 KAKAKGADFDSKTCELFLDHYMGTEDMKSALHWVENVTKLPKKAGK---LDQEKIQKFSK 472
Query: 419 HFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSE 478
+FE++KDV GAE L + + + +V+E L+RTY AAG T+ + +++K +K+E+
Sbjct: 473 YFEEQKDVQGAEKLCSCL-RTLGCIDGKVYESLLRTYLAAGETNHSLRQQIKDDKIEICY 531
Query: 479 ASKKLLE 485
KLL+
Sbjct: 532 DIGKLLK 538
>gi|255647669|gb|ACU24296.1| unknown [Glycine max]
Length = 484
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 177/426 (41%), Positives = 261/426 (61%), Gaps = 10/426 (2%)
Query: 38 SVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHL 97
+V Q L+Q++ K + K E+ +++LR + + AL++ E ME R +N + S+ A+ L
Sbjct: 43 TVSQTLDQYIMEGKVIKKPELERCVEQLRKYRRFQHALEIIEWMEIRKVNFSWSNYAVQL 102
Query: 98 DLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFS 157
DLV+K +G+DAAEN+F LP +KN TYG+LLNCYCKELM +KA + + M EL +
Sbjct: 103 DLVSKTKGVDAAENFFGGLPPPAKNRYTYGALLNCYCKELMKDKALSHFDTMDELGY-VT 161
Query: 158 SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIE 217
++ FN++MTL+ K G P+K+P +++ MK +I +TY++WM + A+ ND+ GAERV E
Sbjct: 162 NLAFNNVMTLFMKLGEPQKVPQLVELMKKRTIPMSPFTYHIWMNSCASSNDLGGAERVYE 221
Query: 218 EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQT 277
EMK + W T+SNLASIYV+ FEKAE LK LE + + AY L+ LY T
Sbjct: 222 EMKTENEGQIGWHTYSNLASIYVKFKDFEKAEMMLKMLEEQVKPKQRDAYHCLLGLYAGT 281
Query: 278 GNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVT 337
GNL EV+R+W SL+ P T N SYL M+ L L D+ G KCFKEWE+ C +YD R+
Sbjct: 282 GNLGEVHRVWDSLKSVSPVT-NFSYLVMLSTLRRLNDMEGLTKCFKEWEASCVSYDARLV 340
Query: 338 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
+V + A+ + LE AE + E A RR P + E F ++L+ ++ AV LE A+
Sbjct: 341 SVCVSAHLNQNMLEEAELVFEEASRRSKGPFFRVREEFMKFFLKKHELDAAVRHLEAALS 400
Query: 398 TGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAA 457
+GD KW PS + + F +++E+E DVDG + F +I K D + I++
Sbjct: 401 EVKGD--KWRPSPQVVGAFFKYYEEETDVDGVDEFSKIFKANNFD------DSWIKSCIT 452
Query: 458 AGRTSP 463
A ++SP
Sbjct: 453 ASKSSP 458
>gi|356536682|ref|XP_003536865.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02370, mitochondrial-like [Glycine max]
Length = 593
Score = 330 bits (847), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 177/426 (41%), Positives = 262/426 (61%), Gaps = 10/426 (2%)
Query: 38 SVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHL 97
+V Q L+Q++ K + K E+ +++LR + + AL++ E ME R +N + S+ A+ L
Sbjct: 43 TVSQTLDQYIMEGKVIKKPELERCVEQLRKYRRFQHALEIIEWMEIRKVNFSWSNYAVQL 102
Query: 98 DLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFS 157
DLV+K +G+DAAEN+F LP +KN TYG+LLNCYCKELM +KA + + M EL +
Sbjct: 103 DLVSKTKGVDAAENFFGGLPPPAKNRYTYGALLNCYCKELMKDKALSHFDTMDELGY-VT 161
Query: 158 SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIE 217
++ FN++MTL+ K G P+K+P +++ MK +I +TY++WM + A+ ND+ GAERV E
Sbjct: 162 NLAFNNVMTLFMKLGEPQKVPQLVELMKKRTIPMSPFTYHIWMNSCASSNDLGGAERVYE 221
Query: 218 EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQT 277
EMK + W T+SNLASIYV+ FEKAE LK LE + + AY L+ LY T
Sbjct: 222 EMKTENEGQIGWHTYSNLASIYVKFKDFEKAEMMLKMLEEQVKPKQRDAYHCLLGLYAGT 281
Query: 278 GNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVT 337
GNL EV+R+W SL+ P T N SYL M+ L L D+ G KCFKEWE+ C +YD R+
Sbjct: 282 GNLGEVHRVWDSLKSVSPVT-NFSYLVMLSTLRRLNDMEGLTKCFKEWEASCVSYDARLV 340
Query: 338 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
+V + A+ + LE AE + E A RR P + E F ++L+ ++ AV LE A+
Sbjct: 341 SVCVSAHLNQNMLEEAELVFEEASRRSKGPFFRVREEFMKFFLKKHELDAAVRHLEAALS 400
Query: 398 TGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAA 457
+GD KW PS + + F++++E+E DVDG + +ILK D + I++
Sbjct: 401 EVKGD--KWRPSPQVVGAFLKYYEEETDVDGVDELSKILKANNFD------DSWIKSCIT 452
Query: 458 AGRTSP 463
A ++SP
Sbjct: 453 ASKSSP 458
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 89/408 (21%), Positives = 164/408 (40%), Gaps = 52/408 (12%)
Query: 76 KLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHL---TYGSLLNC 132
+L E M+KR + + I ++ A + AE + ++ ++ + TY +L +
Sbjct: 183 QLVELMKKRTIPMSPFTYHIWMNSCASSNDLGGAERVYEEMKTENEGQIGWHTYSNLASI 242
Query: 133 YCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPD 192
Y K EKAE +L+ ++E ++ L+ LYA TG+ ++ + +K+ S + +
Sbjct: 243 YVKFKDFEKAEMMLKMLEEQVKPKQRDAYHCLLGLYAGTGNLGEVHRVWDSLKSVSPVTN 302
Query: 193 SYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERAL 252
++Y V + L +ND+ G + +E + V+ D S S ++ + E+AE
Sbjct: 303 -FSYLVMLSTLRRLNDMEGLTKCFKEWEASC-VSYDARLVSVCVSAHLNQNMLEEAELVF 360
Query: 253 KELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNL 312
+E R+ + + + + L R L A + QV+
Sbjct: 361 EEASRRSKGPFFRVREEFMKFFLKKHELDAAVR---HLEAALSEVKGDKWRPSPQVVGAF 417
Query: 313 -------KDLPGAEKCFK---------EWESGCAT------------------------- 331
D+ G ++ K W C T
Sbjct: 418 LKYYEEETDVDGVDELSKILKANNFDDSWIKSCITASKSSPEIDPGMKEDSQVYHAQETR 477
Query: 332 -YDIRVTNVMIGAYAKEGRLENAEELKERARRR-GADPNAKTWEIFSDYYLRNGDMKLAV 389
DI + + +Y K+ +E A + E ARRR +P E Y+L ++ AV
Sbjct: 478 LLDIMEKQLCVASYLKQNTVEEAALVFEEARRRRSKEPLFSIKEKLMSYFLEIHELDDAV 537
Query: 390 DCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 437
LE A +GD +W PS + + F+ ++E+E +VDG + +I K
Sbjct: 538 RHLEVAFSEVKGDD-EWRPSVQIVWDFLEYYEEEMNVDGHDELYKITK 584
>gi|326502008|dbj|BAK06496.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 551
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 191/471 (40%), Positives = 289/471 (61%), Gaps = 18/471 (3%)
Query: 25 LYDRLFKKGSS-DVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENM-E 82
LY RL G++ + SV LN++L+ + ++ +K+LR K + AL+L + M
Sbjct: 86 LYRRLSALGNAGEGSVSAVLNKWLREGRETRSVDLERYVKELRRYKRHSQALELMDWMVH 145
Query: 83 KRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKA 142
+GMN + ++ AI LDL+ KV+G++AAE YF LP+ +KNH T+G+LLNCYC EKA
Sbjct: 146 TKGMNMSYTNHAIRLDLIYKVRGLEAAEKYFEGLPDPAKNHRTFGALLNCYCSSKEEEKA 205
Query: 143 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 202
L KM EL + S++P N+LM+LY K G +K+ ++ +EMK ++ PD+ T + M +
Sbjct: 206 TDLYRKMDELGISSSTLPINNLMSLYMKLGQHKKVCSLFEEMKEKNVKPDNLTCCILMTS 265
Query: 203 LAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 261
LAA+N I E+V++EM ++DG + W+ +S LASIY AGL EKAE ALK+LE
Sbjct: 266 LAALNKIDDVEQVLKEMEEKDGVLG--WSAYSTLASIYQSAGLVEKAESALKKLEGLVQD 323
Query: 262 RD-LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 320
RD + FL++LY GNLSEV R+W ++ FP N SY +M+Q L+ L D ++
Sbjct: 324 RDGRQPFDFLMSLYASVGNLSEVKRVWGVVKATFPKVTNTSYFSMLQALLKLNDADYMKQ 383
Query: 321 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 380
F+EWES YD ++TNVM A+ K G + AE L E+A+ +GA ++KT E+F D+Y+
Sbjct: 384 VFEEWESNHEFYDAKLTNVMTRAHLKNGMAKEAELLWEKAKEKGACFDSKTCELFLDHYM 443
Query: 381 RNGDMKLAVDCLEKAI----DTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 436
GDMK A++ +E T + D K I F ++FE++KDV GAE F L
Sbjct: 444 VAGDMKSALNWVENVTKLPKKTAKLDQDK-------IPKFSKYFEEQKDVQGAERFCRCL 496
Query: 437 KKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAI 487
+A+ + + +E L+RTY AAG TS + +++K +K+E+ KLL+ +
Sbjct: 497 -RALGCIDGKAYESLLRTYLAAGETSRSLRQQIKDDKIEICYDIGKLLKRL 546
>gi|115436124|ref|NP_001042820.1| Os01g0301000 [Oryza sativa Japonica Group]
gi|57899052|dbj|BAD87826.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113532351|dbj|BAF04734.1| Os01g0301000 [Oryza sativa Japonica Group]
gi|215694668|dbj|BAG89859.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215706899|dbj|BAG93359.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 522
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 179/467 (38%), Positives = 283/467 (60%), Gaps = 8/467 (1%)
Query: 24 ALYDRLFK-KGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENM- 81
+LY RL G+ + SV + +N++++ + ++ +K+LR K + AL+L E M
Sbjct: 56 SLYRRLSALGGAGEGSVSRVMNKWVREGREARAADLAKYVKELRKYKRHAHALELMEWMV 115
Query: 82 EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEK 141
+GMN + ++ AI LDL+ KV+GI+AAE YF LP+ KNH TYG+LLNCYC M +K
Sbjct: 116 NTKGMNMSYTNHAIRLDLIYKVRGIEAAEQYFAGLPDPGKNHKTYGALLNCYCSAKMEDK 175
Query: 142 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 201
A + KM EL + S++P N+LM+LY K G K+ ++ +EMK ++ PD+ T + M
Sbjct: 176 ATDIYRKMDELGISSSTLPINNLMSLYVKIGQHRKVTSLFEEMKVKNVKPDNLTCCLLMS 235
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR-NA 260
+ AA+N I V++EM+ + +VA W+ +S LAS+YV A + E+AE ALK+LE+ +
Sbjct: 236 SYAALNKIDTVGEVLKEME-EKKVALGWSAYSTLASLYVNANMVEEAESALKKLESLIDV 294
Query: 261 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 320
+ FL++LY GNLSEV R+W ++ F N SYL M+Q L L D ++
Sbjct: 295 QAGRQPFDFLMSLYASVGNLSEVNRVWNLIKANFQKVTNTSYLGMLQALYKLNDDDRMKQ 354
Query: 321 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 380
+++WES YD R+TN+M A+ + G + AE L E+ + +GA+ ++KT E+F ++Y+
Sbjct: 355 IYEDWESNYENYDARLTNMMTRAHLRNGLTKEAELLWEKVKEKGAEFDSKTCELFLEHYM 414
Query: 381 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 440
GDM A++ +E R K E I F+++FE+ KDV+GAE FL L+ +
Sbjct: 415 GKGDMTSALNWVENMTKLPR---KKSKLDQEKISCFLKYFEEHKDVEGAERFLNCLRTS- 470
Query: 441 DDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAI 487
+ + +E L+RTY AAG+TS + + +K +K+E+ KLL+ I
Sbjct: 471 GCIDGKAYESLLRTYLAAGKTSRSIRQMIKEDKIEICYGIGKLLKRI 517
>gi|125525544|gb|EAY73658.1| hypothetical protein OsI_01545 [Oryza sativa Indica Group]
Length = 522
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 179/467 (38%), Positives = 283/467 (60%), Gaps = 8/467 (1%)
Query: 24 ALYDRLFK-KGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENM- 81
+LY RL G+ + SV + +N++++ + ++ +K+LR K + AL+L E M
Sbjct: 56 SLYRRLSALGGAGEGSVSRVMNKWVREGREARAADLAKYVKELRKYKRHAHALELMEWMV 115
Query: 82 EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEK 141
+GMN + ++ AI LDL+ KV+GI+AAE YF LP+ KNH TYG+LLNCYC M +K
Sbjct: 116 NTKGMNMSYTNHAIRLDLIYKVRGIEAAELYFAGLPDPGKNHKTYGALLNCYCSAKMEDK 175
Query: 142 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 201
A + KM EL + S++P N+LM+LY K G K+ ++ +EMK ++ PD+ T + M
Sbjct: 176 ATDIYRKMDELGISSSTLPINNLMSLYVKIGQHRKVTSLFEEMKVKNVKPDNLTCCLLMS 235
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR-NA 260
+ AA+N I V++EM+ + +VA W+ +S LAS+YV A + E+AE ALK+LE+ +
Sbjct: 236 SYAALNKIDTVGEVLKEME-EKKVALGWSAYSTLASLYVNANMVEEAESALKKLESLIDV 294
Query: 261 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 320
+ FL++LY GNLSEV R+W ++ F N SYL M+Q L L D ++
Sbjct: 295 QAGRQPFDFLMSLYASVGNLSEVNRVWNLIKANFQKVTNTSYLGMLQALYKLNDDDRMKQ 354
Query: 321 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 380
+++WES YD R+TN+M A+ + G + AE L E+ + +GA+ ++KT E+F ++Y+
Sbjct: 355 IYEDWESNYENYDARLTNMMTRAHLRNGLTKEAELLWEKVKEKGAEFDSKTCELFLEHYM 414
Query: 381 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 440
GDM A++ +E R K E I F+++FE+ KDV+GAE FL L+ +
Sbjct: 415 GKGDMTSALNWVENMTKLPR---KKSKLDQEKISCFLKYFEEHKDVEGAERFLNCLRTS- 470
Query: 441 DDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAI 487
+ + +E L+RTY AAG+TS + + +K +K+E+ KLL+ I
Sbjct: 471 GCIDGKAYESLLRTYLAAGKTSRSIRQMIKEDKIEICYGIGKLLKRI 517
>gi|242057165|ref|XP_002457728.1| hypothetical protein SORBIDRAFT_03g012450 [Sorghum bicolor]
gi|241929703|gb|EES02848.1| hypothetical protein SORBIDRAFT_03g012450 [Sorghum bicolor]
Length = 530
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 181/467 (38%), Positives = 280/467 (59%), Gaps = 10/467 (2%)
Query: 25 LYDRLFKKG-SSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENM-E 82
LY RL G + + SV + LN++++ E+ +K+LR K + AL++ + M
Sbjct: 66 LYRRLSALGIAGEGSVSRVLNKWVREGGAPRSEELVKHVKELRKYKRHAHALEVMDWMVN 125
Query: 83 KRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKA 142
RGMN ++++ AI LDL+ KV+G++AAENYF +LP+ +KNH TYG+LL+CYC M EKA
Sbjct: 126 ARGMNMSITNHAIRLDLIYKVRGLEAAENYFANLPDPAKNHRTYGALLSCYCSAKMEEKA 185
Query: 143 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 202
L +M EL ++P N+LM+LY K K+ ++ +EMK +I PDS T + M +
Sbjct: 186 TYLYRQMDELGFWSGTLPINNLMSLYMKLDQHRKVDSLFEEMKVKNIKPDSLTCCILMTS 245
Query: 203 LAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 261
AA N I E +++EM ++D V+ W+ +S LASIYV AG EKAE ALK+LE
Sbjct: 246 YAASNKIDAIEELLKEMVEKD--VSLGWSAYSTLASIYVNAGQVEKAESALKKLEGLIGA 303
Query: 262 RD-LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 320
D + FL++LY GNLSE+ R+W ++ F NISYL M+ L L D+ ++
Sbjct: 304 EDGRQPFDFLMSLYASLGNLSEINRVWDVIKAKFSTVTNISYLGMLHALYKLNDIDRMKQ 363
Query: 321 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 380
+ EWES TYD+R+TN+MI + + G E AE L+E+A+ +G + ++KT E+F D+Y+
Sbjct: 364 IYMEWESNYQTYDVRLTNMMIRGHLRLGMSEEAETLREKAKEKGVEFDSKTCELFLDHYM 423
Query: 381 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 440
GDM A++ +E + G + I F ++FE+ KD D AE F L + +
Sbjct: 424 GKGDMNSALNWVENMTKLPKKAGK---LDQDRIYKFQKYFEEHKDADSAERFCNCL-RML 479
Query: 441 DDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAI 487
+ + +E L+RTY AAG+ S + +++K +K+E+ KLL+ +
Sbjct: 480 GCIDGKAYESLLRTYLAAGKKSCSLRQQIKNDKIEICYDIGKLLKRL 526
>gi|223974825|gb|ACN31600.1| unknown [Zea mays]
Length = 515
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 183/467 (39%), Positives = 281/467 (60%), Gaps = 10/467 (2%)
Query: 25 LYDRLFKKGSS-DVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENM-E 82
LY RL GS+ + SV + LN++++ ++ +K+LR K + AL+L + M
Sbjct: 50 LYRRLSALGSAGEGSVSRVLNKWVREGGATRSDDLVKHVKELRKYKRHAHALELMDWMVN 109
Query: 83 KRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKA 142
RGMN + ++ AI L+L+ KV+G++AAENYF +LP+ +KNH TYGSLL+CYC M EKA
Sbjct: 110 ARGMNMSHTNHAIRLELIYKVRGLEAAENYFANLPDPAKNHRTYGSLLSCYCSAKMEEKA 169
Query: 143 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 202
L +M EL + S++P N+LM+LY K K+ ++ +EMK ++ P+S T + M +
Sbjct: 170 TNLYRQMDELGIWSSTLPINNLMSLYMKLDQYRKVVSLFEEMKLKNVKPNSLTCCILMTS 229
Query: 203 LAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR-NA 260
AA+N I E +++EM ++D V W+ +S LASIYV AG F KAE ALK+LE +A
Sbjct: 230 YAALNKIDDIEELLKEMVEKD--VTLGWSAYSTLASIYVNAGQFGKAESALKKLEGLISA 287
Query: 261 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 320
H D + FL++LY GNLSEV R+W ++ F N SYL M+ L L D+ ++
Sbjct: 288 HDDRQPFDFLLSLYASLGNLSEVNRVWNVIKSKFSKVTNTSYLGMLHALYKLNDIDRMKQ 347
Query: 321 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 380
+ EWES T+D+++TN+MI ++ K G E AE L E+ + GA+ + KT E+F D+Y+
Sbjct: 348 IYMEWESNYETFDVKLTNMMIRSHLKVGMTEEAEMLVEKVKENGAEFDTKTCELFLDHYM 407
Query: 381 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 440
DM A++ LE + + I F ++FE+ KD DGAE F L + +
Sbjct: 408 GTEDMNSALNWLENMTKLSKKAEK---LDQDRIYKFQKYFEEHKDADGAERFCNCL-RTL 463
Query: 441 DDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAI 487
+ + +E L+RTY AAG+ S + +++K +KVE+ KLL+ +
Sbjct: 464 GCIDGKAYESLLRTYLAAGKKSCSLRQQIKNDKVEICYDIGKLLKRL 510
>gi|357142115|ref|XP_003572464.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01990,
mitochondrial-like [Brachypodium distachyon]
Length = 546
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 175/449 (38%), Positives = 264/449 (58%), Gaps = 12/449 (2%)
Query: 42 QLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVA 101
+L+Q+L+ ++ + + ++ ++KLR + Y AL+L + ME RG + + A+ L LV
Sbjct: 104 ELDQWLRERRPLSEQQLFSYVRKLRSYRHYKRALELMDWMEARGASLQLGHHAVRLGLVC 163
Query: 102 KVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPF 161
KV G++AAE YF LPE K+ TY SLLNCY + +K L EKMK +N+ S++ +
Sbjct: 164 KVNGLEAAEEYFWSLPEMFKSIKTYSSLLNCYAEHRKADKGLELFEKMKAMNITPSTLVY 223
Query: 162 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 221
N+LM LY KT PEKIP ++M+ + + DS+TY + ++ VND+ AE+ +EE+++
Sbjct: 224 NNLMDLYLKTDQPEKIPTTFEQMRENHVRTDSFTYYMLTQSYIMVNDLKSAEKFVEELEK 283
Query: 222 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 281
V W+ ++ LA+ Y + F+KA ALK+ E ++SA+ L++LY +GN S
Sbjct: 284 STPVP--WSLYTVLANNYNKLAQFDKAVLALKKAEEVMDRSEISAWHNLLSLYASSGNSS 341
Query: 282 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 341
EV R+W SL+ AF N SYL M+ L L D ++ F+EWES YD+R+TNVMI
Sbjct: 342 EVKRVWESLKSAFTKCINRSYLVMLSALKKLDDFDSLQQLFQEWESTHERYDMRITNVMI 401
Query: 342 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL---EKAIDT 398
AY + + AE L++ A +G N T+ IF YL A+D EK + T
Sbjct: 402 EAYLAKDMTDEAEALRQTAMAKGHS-NVTTFYIFVVSYLEKSRTSEALDIWRDAEKMVKT 460
Query: 399 GRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAA 458
WVP E + F++HFE+ KDVDG E F E LKK + L E + LIRTYAAA
Sbjct: 461 -----PNWVPPKELVTRFLKHFEEAKDVDGMEAFWEHLKK-LGCLDAEAYGALIRTYAAA 514
Query: 459 GRTSPVMLRRLKMEKVEVSEASKKLLEAI 487
GRT+ + RR++ ++VE+ ++LL +
Sbjct: 515 GRTNTSISRRIEEDRVEIGPDMEELLRGV 543
>gi|357442213|ref|XP_003591384.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480432|gb|AES61635.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 174/459 (37%), Positives = 260/459 (56%), Gaps = 11/459 (2%)
Query: 25 LYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKR 84
LY RL + +V Q LNQ++ K + K E+ +++LR + ++ A ++ E M R
Sbjct: 92 LYRRLADLEKTGGTVSQTLNQYIIEGKALGKDELERCVQELRKYRRFHHAFEIMEWMMMR 151
Query: 85 GMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEA 144
+N + + A++LDLV+KV+G+ AEN+F P +KN TYGSLLNCYCKELM +KA +
Sbjct: 152 QINFSWDNYAVYLDLVSKVKGVVEAENHFNSFPPPAKNKYTYGSLLNCYCKELMLDKALS 211
Query: 145 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 204
+KM E +S+ F +LM++Y + P K+P ++ MK I +TY +WM + A
Sbjct: 212 HFDKMDEFGY-LTSLSFTNLMSMYMRLSQPSKVPQLVNVMKERKIRMTEFTYILWMNSCA 270
Query: 205 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 264
A+ND+ ERV EEMKR+ DW T+SNLA+IY++AG FEKAE LK++E R
Sbjct: 271 ALNDLGEVERVYEEMKREDEDKIDWKTYSNLAAIYIKAGFFEKAELMLKKVEGVMKPRQR 330
Query: 265 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 324
Y FL++LY TGN+ EVYR+W +L+ P T N SYL M+ L L D+ G K FKE
Sbjct: 331 ETYHFLLSLYAGTGNVKEVYRVWGTLKKITPVT-NRSYLIMLSNLRRLNDMEGIIKLFKE 389
Query: 325 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 384
WES +YD R+ V + AY + + A + E A + P + E+F L G
Sbjct: 390 WESRHVSYDSRLVGVAVQAYLSQNMDKEAVLVFEEALKSCRGPFFRIREMFMASLLEKGQ 449
Query: 385 MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLG 444
+ A+ LE A+ K+ PS + + F++++E+E D+DG + +IL+ D
Sbjct: 450 LDGAMSHLEAAL--SEASDYKYQPSPQVVSAFLKYYEEETDLDGVDELSKILRSHNFD-- 505
Query: 445 VEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKL 483
E I+T A +SP + LK E V++A + L
Sbjct: 506 ----ESYIKTCITASESSPGIHTVLK-EDSYVNQAHENL 539
>gi|242076656|ref|XP_002448264.1| hypothetical protein SORBIDRAFT_06g024190 [Sorghum bicolor]
gi|241939447|gb|EES12592.1| hypothetical protein SORBIDRAFT_06g024190 [Sorghum bicolor]
Length = 515
Score = 293 bits (751), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 158/439 (35%), Positives = 249/439 (56%), Gaps = 10/439 (2%)
Query: 25 LYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKR 84
LY R+ G V + L + + ++R+ KWE+ K+LR + + AL++ + M +R
Sbjct: 82 LYRRI-AVGHGGRPVGRTLGAWDEGERRLDKWELCRIAKELRKFRRFNLALQVYDWMTER 140
Query: 85 G--MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKA 142
+ + SD AI LDL+AKV+G+ AE YF +LP+ K+ TYGSLLN Y + +M EK
Sbjct: 141 RDRFSLSSSDMAIQLDLIAKVRGVSHAEKYFDELPDAMKDKRTYGSLLNVYAQAMMKEKT 200
Query: 143 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 202
E E+M++ ++P N LM Y +G P ++ AII EMK ++ D TYN+W+++
Sbjct: 201 EDTFEQMRKKGFASDTLPCNVLMNFYVDSGEPNEVLAIIDEMKERNVSFDVCTYNIWIKS 260
Query: 203 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 262
AA D ERV +M D V A+WTT++ LAS+Y++ G EKAE LK+ E R R
Sbjct: 261 CAAKQDAEEMERVFSQMIADESVVANWTTYTTLASMYIKLGNSEKAEECLKDAEKRTTGR 320
Query: 263 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 322
+ + +L+TLY G EVYRIW + FP N+ Y ++ LV + D+ GAE +
Sbjct: 321 EKKCFHYLMTLYSHLGKKEEVYRIWNWYKATFPMIHNLGYQELLSALVRIGDIEGAELLY 380
Query: 323 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 382
+EW S +++D + N+++ YAKEG + AE+ R +G +P TWEI + Y+++
Sbjct: 381 EEWASKSSSFDPKTMNILLAWYAKEGLITKAEQTLNRFVEKGGNPKPNTWEILATAYMKD 440
Query: 383 GDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL--KKAV 440
+ A+ C+EKA T KW P + + + F+++ D +GA+ + +L +
Sbjct: 441 DKISEALSCMEKA--TAIKSANKWKPRPTNVESLLASFKEKNDAEGADRLVSVLTSRGCA 498
Query: 441 DDLGVEVFEPLIRTYAAAG 459
+D E ++ LI TYA AG
Sbjct: 499 ED---EEYKSLINTYAFAG 514
>gi|115436132|ref|NP_001042824.1| Os01g0301700 [Oryza sativa Japonica Group]
gi|14495231|dbj|BAB60950.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113532355|dbj|BAF04738.1| Os01g0301700 [Oryza sativa Japonica Group]
gi|125525550|gb|EAY73664.1| hypothetical protein OsI_01547 [Oryza sativa Indica Group]
gi|125570062|gb|EAZ11577.1| hypothetical protein OsJ_01442 [Oryza sativa Japonica Group]
gi|215713519|dbj|BAG94656.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 504
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 174/490 (35%), Positives = 280/490 (57%), Gaps = 11/490 (2%)
Query: 4 PQRFGRTKNIAKRSKKHLEEA---LYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGD 60
P+R R A ++ L+ A LY RL S V ++L ++L+ ++ + + +V
Sbjct: 19 PRRQARGLQYASPERRPLDGARWALYARLSAHLPSGGMV-EELGRWLRERRPLSEEQVLF 77
Query: 61 TLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS 120
+++ R K AL+L + ME RG+N + A+ LDLV+K+ GI AAE YF LP+
Sbjct: 78 CVRRFRKFKQNKHALQLMDWMEARGVNLELKHHALRLDLVSKLNGIHAAEEYFGSLPDIF 137
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
++ TY +LLNCY + M EK L E MK +N+ + +N+LM LY KT PEKIP
Sbjct: 138 RSKQTYSTLLNCYAEHRMAEKGLELYENMKAMNIVSDILVYNNLMCLYLKTDQPEKIPTT 197
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
+ +M+ S I P+ ++Y V + +NDI AE+V++E++ V W+ ++ LA+ Y
Sbjct: 198 VVKMQESGIQPNKFSYFVLTESYIMMNDIESAEKVLKELQEVNSVP--WSLYATLANGYN 255
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
+ F+KAE LK+ E D+ ++ L++ Y +GNLSEV RIW SL+ AF N
Sbjct: 256 KLQQFDKAEFTLKKAEEVLDKHDVFSWHCLLSHYANSGNLSEVKRIWESLKSAFKKCTNR 315
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
SYL M++ L L D ++ F+EWES YD+++ N++I AY +G ++ AE +++
Sbjct: 316 SYLVMLKALKKLDDFDTLQQIFQEWESSHEHYDMKIPNIIIQAYLDKGMVDKAEAMRQTT 375
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 420
+ N +T+ IF+++YL M A+ + A +G WVP + + +++HF
Sbjct: 376 MAQDHS-NYRTFCIFAEFYLEKSKMNEALQVWKDAKKMVKGQD--WVP-EKLVNRYLKHF 431
Query: 421 EQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEAS 480
E KDVDG E F E LK + L E +E LIRTY + GRT+P + +R+++++V++
Sbjct: 432 EDSKDVDGMETFCECLKN-LGRLDAEAYEALIRTYISVGRTNPSIPQRMEVDRVDIRPEM 490
Query: 481 KKLLEAICVE 490
+ L+AI E
Sbjct: 491 FESLKAISTE 500
>gi|225453344|ref|XP_002270492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02150
[Vitis vinifera]
Length = 527
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 159/417 (38%), Positives = 242/417 (58%), Gaps = 7/417 (1%)
Query: 24 ALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEK 83
A+Y R+ + ++ LNQ+ KR+ KWE+ +K+LR K + AL++ E M
Sbjct: 59 AVYRRISLMENPEMGSASVLNQWENEGKRLTKWELCRVVKELRKFKRFKMALEVYEWMNN 118
Query: 84 RG--MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEK 141
RG + SD AI LDL+AKV G+ +AE+YF LP+T K+ YG+LLN Y + M +K
Sbjct: 119 RGERFRLSSSDAAIQLDLIAKVCGVSSAEDYFSRLPDTLKDKRIYGALLNAYVQAKMRDK 178
Query: 142 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 201
AE L+EK++ + +PFN +MTLY +K+ ++I EM +I D Y+YN+W
Sbjct: 179 AEILIEKLRNKGYATTPLPFNVMMTLYMNLKELDKVQSMISEMMNKNIQLDIYSYNIW-- 236
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 261
L++ E+V E+MK + + +WTTFS +A++Y++ G FEKAE LK++E+R +
Sbjct: 237 -LSSCESTERMEQVFEQMKLERTINPNWTTFSTMATMYIKLGQFEKAEECLKKVESRITN 295
Query: 262 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 321
RD Y +LI+LYG TGN +EVYR W + FPN N+ Y +I LV + DL GAEK
Sbjct: 296 RDRMPYHYLISLYGSTGNKAEVYRAWNIYKSKFPNIPNLGYHALISSLVRVGDLEGAEKI 355
Query: 322 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 381
++EW S ++YD R+ N+++G Y KEG LE AE + G PN+ TWEI ++
Sbjct: 356 YEEWLSVKSSYDPRIGNLLLGCYVKEGFLEKAEGFLDHMIEAGGKPNSTTWEILAEGNTG 415
Query: 382 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 438
+ A+ C ++A+ G G W P + F+ E+E D E + +L++
Sbjct: 416 VKKISDALSCFKRAV-LAEGSNG-WKPKPVNVSAFLDLCEEEADTATKEALMGLLRQ 470
>gi|297734632|emb|CBI16683.3| unnamed protein product [Vitis vinifera]
Length = 423
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 159/409 (38%), Positives = 239/409 (58%), Gaps = 8/409 (1%)
Query: 43 LNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRG--MNKTVSDQAIHLDLV 100
LNQ+ KR+ KWE+ +K+LR K + AL++ E M RG + SD AI LDL+
Sbjct: 12 LNQWENEGKRLTKWELCRVVKELRKFKRFKMALEVYEWMNNRGERFRLSSSDAAIQLDLI 71
Query: 101 AKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMP 160
AKV G+ +AE+YF LP+T K+ YG+LLN Y + M +KAE L+EK++ + +P
Sbjct: 72 AKVCGVSSAEDYFSRLPDTLKDKRIYGALLNAYVQAKMRDKAEILIEKLRNKGYATTPLP 131
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
FN +MTLY +K+ ++I EM +I D Y+YN+W L++ E+V E+MK
Sbjct: 132 FNVMMTLYMNLKELDKVQSMISEMMNKNIQLDIYSYNIW---LSSCESTERMEQVFEQMK 188
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
+ + +WTTFS +A++Y++ G FEKAE LK++E+R +RD Y +LI+LYG TGN
Sbjct: 189 LERTINPNWTTFSTMATMYIKLGQFEKAEECLKKVESRITNRDRMPYHYLISLYGSTGNK 248
Query: 281 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 340
+EVYR W + FPN N+ Y +I LV + DL GAEK ++EW S ++YD R+ N++
Sbjct: 249 AEVYRAWNIYKSKFPNIPNLGYHALISSLVRVGDLEGAEKIYEEWLSVKSSYDPRIGNLL 308
Query: 341 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 400
+G Y KEG LE AE + G PN+ TWEI ++ + A+ C ++A+
Sbjct: 309 LGCYVKEGFLEKAEGFLDHMIEAGGKPNSTTWEILAEGNTGVKKISDALSCFKRAV-LAE 367
Query: 401 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK-AVDDLGVEVF 448
G G W P + F+ E+E D E + +L++ +D G E+
Sbjct: 368 GSNG-WKPKPVNVSAFLDLCEEEADTATKEALMGLLRQMGYEDDGAEML 415
>gi|224063635|ref|XP_002301239.1| predicted protein [Populus trichocarpa]
gi|222842965|gb|EEE80512.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 151/419 (36%), Positives = 240/419 (57%), Gaps = 6/419 (1%)
Query: 24 ALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEK 83
A+Y R+ + ++ LNQ+ KR+ KWE+ +K+LR K Y AL++ + M
Sbjct: 70 AIYRRISLMENPELGSGSVLNQWENDGKRLTKWELCRVVKELRKYKRYQQALEVYDWMNN 129
Query: 84 RG--MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEK 141
R + SD AI LDL+AKV+G+ +AE++F+ LP T K+ YG+LLN Y + M EK
Sbjct: 130 RQERFGLSPSDAAIQLDLIAKVRGVSSAEDFFLRLPNTFKDRRIYGALLNAYVRNRMREK 189
Query: 142 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 201
AE+L+++M+ + ++P+N +MTLY +K+ II EM +I D Y+YN+W+
Sbjct: 190 AESLIDEMRGKDYVTHALPYNVMMTLYMNINEYDKVDLIISEMNEKNIKLDIYSYNIWLS 249
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 261
+ E+V E+MK DG + +WTTFS +A++Y++ G FEKAE L+ +E+R
Sbjct: 250 SCGLQGSADKMEQVFEQMKSDGSINPNWTTFSTMATMYIKMGKFEKAEDCLRRVESRITG 309
Query: 262 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 321
RD Y +L++LYG GN EVYR+W + FP+ N+ Y MI LV + D+ GAEK
Sbjct: 310 RDRIPYHYLLSLYGNVGNKEEVYRVWNIYKSIFPSIPNLGYHAMISSLVRMDDIEGAEKI 369
Query: 322 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 381
++EW S +YD R+ N+ + A+ +G L+ AE + G PN+ +WEI + ++
Sbjct: 370 YEEWLSIKTSYDPRIANLFMAAFVYQGNLDKAESFFDHMLEEGGKPNSHSWEILAQGHIS 429
Query: 382 NGDMKLAVDCLEKAIDTGRGDGGK-WVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 439
A+ CL++A T G K W P+ + +F + E+E D+ E L+++
Sbjct: 430 ERRTSEALSCLKEAFAT---PGSKSWKPNPANVSSFFKLCEEEVDMASKEALASFLRQS 485
>gi|293332912|ref|NP_001168310.1| hypothetical protein [Zea mays]
gi|223947377|gb|ACN27772.1| unknown [Zea mays]
gi|414586053|tpg|DAA36624.1| TPA: hypothetical protein ZEAMMB73_688721 [Zea mays]
Length = 513
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 157/439 (35%), Positives = 247/439 (56%), Gaps = 10/439 (2%)
Query: 25 LYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKR 84
LY R+ G V + L + + ++R+ KWE+ K+LR + + AL++ + M +R
Sbjct: 80 LYRRI-AVGHGGRPVGRTLGAWDEGERRLDKWELCRIAKELRKFRRFNLALQVYDWMTER 138
Query: 85 G--MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKA 142
+ SD AI LDL+AKV+G+ AE YF +LP+ K+ TYGSLLN Y + +M EK
Sbjct: 139 RDRFPLSSSDMAIQLDLIAKVRGVPHAEKYFDELPDAMKDKRTYGSLLNVYAQAMMKEKT 198
Query: 143 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 202
E E+M++ ++P N LM Y +G P+++ AII EMK ++ D TYN+W+++
Sbjct: 199 EETFEQMRKKGFASDTLPCNVLMNFYVDSGEPDEVLAIIDEMKERNVSFDVCTYNIWIKS 258
Query: 203 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 262
AA D E+V +M D V A+WTT++ LAS+Y++ G EKAE LK+ E R R
Sbjct: 259 CAAKQDAEEMEQVFSQMIADESVVANWTTYTTLASMYLKLGNSEKAEECLKDAEKRTTGR 318
Query: 263 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 322
+ + +L+TLY G EVYRIW + FP N+ Y ++ L+ + D+ GAE +
Sbjct: 319 EKKCFHYLMTLYSHLGKKEEVYRIWNWYKATFPMIHNLGYQELLSALIRIGDIEGAELLY 378
Query: 323 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 382
+EW S ++D + N+++ YAKEG + AE+ R +G +P TWEI + Y+ +
Sbjct: 379 EEWASKSYSFDPKTMNILLAWYAKEGLITKAEQTVNRFVEKGGNPKPNTWEILATAYMND 438
Query: 383 GDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL--KKAV 440
+ A+ C+EKA T KW P + T + F+++ D +GA+ + +L +
Sbjct: 439 DKISEALSCMEKA--TAVKSASKWKPRPTNVETLLASFKEKNDAEGADRLVSVLTSRGCA 496
Query: 441 DDLGVEVFEPLIRTYAAAG 459
+D E ++ LI TYA AG
Sbjct: 497 ED---EEYKSLIDTYAFAG 512
>gi|32488964|emb|CAE04345.1| OSJNBb0038F03.9 [Oryza sativa Japonica Group]
Length = 511
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 153/435 (35%), Positives = 247/435 (56%), Gaps = 6/435 (1%)
Query: 24 ALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEK 83
+LY R+ G V + L + + ++R+ KWE+ ++LR + + AL++ + M +
Sbjct: 77 SLYRRI-AVGHGGRPVGRTLGAWDEGERRLDKWELCRIARELRKFRRFNLALQVYDWMTE 135
Query: 84 RG--MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEK 141
R + + SD AI LDL+AKV+G+ AE YF +LP+ K+ TYGSLLN Y + +M EK
Sbjct: 136 RRDRFSLSSSDMAIQLDLIAKVRGVSHAEEYFEELPDPLKDKRTYGSLLNVYAQAMMKEK 195
Query: 142 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 201
E+ E+M++ ++PFN LM Y EK+ +I EM ++ D TYN+W++
Sbjct: 196 TESTFEQMRKKGFATDTLPFNVLMNFYVDAEEAEKVSILIDEMMERNVAFDVCTYNIWIK 255
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 261
+ AA+ D E+V +M RD V A+WTT++ LAS++++ G EKAE +LKE E R
Sbjct: 256 SCAAMQDADAMEQVFNQMIRDETVVANWTTYTTLASMHIKLGNSEKAEESLKEAEKRTTG 315
Query: 262 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 321
R+ + +L+TLY G EVYR+W + FP N+ Y ++ LV L D+ GAE
Sbjct: 316 REKKCFHYLMTLYSHLGKKEEVYRVWNWYKATFPTIHNLGYQEVLSALVRLGDIEGAELL 375
Query: 322 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 381
++EW S +++D + N+++ YA+EG + AE+ R +G +P TWEI YL+
Sbjct: 376 YEEWASKSSSFDPKTMNILLAWYAREGFVTKAEQTLNRFVEKGGNPKPNTWEILGTAYLK 435
Query: 382 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVD 441
+G A+ CLEKA T KW P + + + +F+++ D + A+ + +L+
Sbjct: 436 DGQSSEALSCLEKA--TAVASPSKWRPRPTNVESLLANFKEKNDAESADRLMNVLRSRRC 493
Query: 442 DLGVEVFEPLIRTYA 456
+ E ++ LI TYA
Sbjct: 494 EEN-EEYKSLINTYA 507
>gi|255573349|ref|XP_002527601.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533018|gb|EEF34782.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 502
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 152/462 (32%), Positives = 264/462 (57%), Gaps = 4/462 (0%)
Query: 24 ALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEK 83
L+ R+ G D+S+ L+ +++ K++ +E+ ++ LR + Y AL++SE M
Sbjct: 36 TLFARISPLGEPDISLVPVLDNWVQEGKKIRGFELQKIIRDLRCHRRYTQALQVSEWMNG 95
Query: 84 RGMNK-TVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKA 142
+G + + +D A+ LDL+ +V+G+++AE+YF +L +N TYG+LLNCY +E + +K+
Sbjct: 96 KGQSGFSPADHAVQLDLIGRVRGLESAESYFQNLVNQDRNDKTYGALLNCYVREGLVDKS 155
Query: 143 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 202
++KMKEL S + +N LM LY +TG EK+ ++ EMK + I PD ++Y + M +
Sbjct: 156 LYHMQKMKELGFASSPLNYNDLMCLYTRTGQLEKVTDVLSEMKENGITPDLFSYRICMSS 215
Query: 203 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 262
AA +D+ G E ++EEM+ ++ DW T+S +ASIYV+A L EKA LK+ E + +R
Sbjct: 216 CAARSDLKGVEEILEEMENQSHISIDWVTYSTVASIYVKASLKEKALIYLKKCEQK-VNR 274
Query: 263 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 322
D Y LI+L G EV R+W ++ N Y+ M+ LV L++L A+K
Sbjct: 275 DALGYNHLISLNASLGIKDEVMRLWGLVKTKCKKQVNRDYITMLGALVKLEELEEADKLL 334
Query: 323 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 382
+EWES C YD RV NV++ Y ++G +E AE + + ++ +P +W I + Y+
Sbjct: 335 QEWESSCQCYDFRVPNVLLIGYCQQGLIEKAEAMLKDIVKKQKNPTPNSWAIIAAGYVNK 394
Query: 383 GDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDD 442
+M+ A +C+++A+ T + + W P + I + + + DV+ E F+ +L+ V
Sbjct: 395 QNMEKAFNCMKEAL-TVQAENKGWRPKANLISSILSWLGENGDVEDVEAFVNLLETKVPK 453
Query: 443 LGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 484
E++ LI+ Y G+ +L + K++ E +K +L
Sbjct: 454 -DREIYHTLIKAYIRGGKQVDGVLENMTANKIDEDEETKTIL 494
>gi|357165075|ref|XP_003580262.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Brachypodium distachyon]
Length = 513
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 156/440 (35%), Positives = 246/440 (55%), Gaps = 10/440 (2%)
Query: 24 ALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEK 83
+LY R+ G V + L + + ++R+ KWE+ ++LR + + AL++ + M +
Sbjct: 79 SLYRRI-AVGHGRRPVGRTLADWDEGERRLDKWELCRVARELRKFRRFNLALQVYDWMTE 137
Query: 84 RG--MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEK 141
R + + SD AI LDLVAKV+G+ AE YF LP+ K+ TYGSLLN Y + M EK
Sbjct: 138 RRDRFSLSSSDMAIQLDLVAKVRGVPHAEEYFESLPDPLKDKRTYGSLLNVYAQARMKEK 197
Query: 142 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 201
E E+M++ ++PFN LM Y P+K+ A+ EMK ++ D TYN+W++
Sbjct: 198 TEDTFEQMRKKGYASDTLPFNVLMNFYVDVEEPQKVSAVTDEMKERNVSFDVCTYNIWIK 257
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 261
+ AA+ D G +RV +M D V A+WTT++ LAS++++ G FEKAE LKE E R
Sbjct: 258 SFAAMKDADGMDRVFNQMIADESVVANWTTYTTLASMHIKLGNFEKAEVCLKEAEKRTTG 317
Query: 262 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 321
RD + FLITLY EVYRIW + F N+ Y ++ LV L D+ GAE
Sbjct: 318 RDKKCFHFLITLYSYLQKKEEVYRIWNWYKATFSTIHNLGYQEVLSALVRLGDIEGAELL 377
Query: 322 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 381
++EW S +++D + N+++ Y++EG + AE+ R +G +P TWEI + YL+
Sbjct: 378 YEEWASKSSSFDPKTMNILLAWYSREGFVVKAEQTLNRFVEKGGNPKPNTWEILASAYLK 437
Query: 382 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL--KKA 439
+ + A+ C+EKA +W P + + + +F++ D D A+ + +L +
Sbjct: 438 DNQLSEALSCMEKA--AAVKSASRWRPRPSNVESLLAYFKENNDTDSADRLMGVLTSRGC 495
Query: 440 VDDLGVEVFEPLIRTYAAAG 459
++ E ++ LI TYA AG
Sbjct: 496 AEN---EEYKSLINTYALAG 512
>gi|356536769|ref|XP_003536907.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Glycine max]
Length = 516
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 150/439 (34%), Positives = 261/439 (59%), Gaps = 11/439 (2%)
Query: 55 KWEVGDTLKKLRDRKLYYPALKLSENME-KRGMNKTVSDQAIHLDLVAKVQGIDAAENYF 113
K+++ +++LR K Y AL++ E M ++ M D A+HLDL+ KV+G+++AE +F
Sbjct: 77 KYQLNRIVRELRKDKRYKHALEVCEWMTLQKDMKLVQGDYAVHLDLITKVRGLNSAEKFF 136
Query: 114 VDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGH 173
DLP+ + T +LL+ Y + + +KAEAL+ KM E +L + +P+N +++LY G
Sbjct: 137 EDLPDRMRGKQTCSALLHAYVQNNLVDKAEALMLKMSECDLLINPLPYNHMISLYISNGK 196
Query: 174 PEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFS 233
EK+P IIQE+K ++ PD T+N+W+ A A+ ND+ AERV+ E+K+ ++ DW T+S
Sbjct: 197 LEKVPKIIQELKMNT-SPDIVTFNLWLAACASQNDVETAERVLLELKK-AKIDPDWVTYS 254
Query: 234 NLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 293
L ++Y++ EKA +KE+ENR + + AY L++L+ GN +V RIW ++ +
Sbjct: 255 TLTNLYIKNASLEKAGATVKEMENRTSRKTRVAYSSLLSLHTNMGNKDDVNRIWEKMKAS 314
Query: 294 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
F + Y+ MI L+ L D GAE ++EWES T D+RV+N+++G+Y + ++E A
Sbjct: 315 FRKMNDNEYICMISSLLKLGDFAGAEDLYREWESVSGTNDVRVSNILLGSYINQDQMEMA 374
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETI 413
E+ + ++G P TWE+F+ YL+ D++ +D KAI + KW P +
Sbjct: 375 EDFCNQIVQKGVIPCYTTWELFTWGYLKRKDVEKFLDYFSKAISS----VTKWSPDQRLV 430
Query: 414 RTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEK 473
+ + E++ GAE L IL+ A + ++ ++TYA AG+ ++ R++ +
Sbjct: 431 QEAFKIIEEQAHTKGAEQLLVILRNA-GHVNTNIYNLFLKTYATAGKMPMIVAERMRKDN 489
Query: 474 VEVSEASKKLLE---AICV 489
V++ E +++LL+ +CV
Sbjct: 490 VKLDEETRRLLDLTSKMCV 508
>gi|125549215|gb|EAY95037.1| hypothetical protein OsI_16851 [Oryza sativa Indica Group]
Length = 511
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 152/434 (35%), Positives = 246/434 (56%), Gaps = 6/434 (1%)
Query: 24 ALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEK 83
+LY R+ G V + L + + ++R+ KWE+ ++LR + + AL++ + M +
Sbjct: 77 SLYRRI-AVGHGGRPVGRTLGAWDEGERRLDKWELCRIARELRKFRRFNLALQVYDWMTE 135
Query: 84 RG--MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEK 141
R + + SD AI LDL+AKV+G+ AE YF +LP+ K+ TYGSLLN Y + +M EK
Sbjct: 136 RRDRFSLSSSDMAIQLDLIAKVRGVSHAEEYFEELPDPLKDKRTYGSLLNVYAQAMMKEK 195
Query: 142 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 201
E+ E+M++ ++PFN LM Y EK+ +I EM ++ D TYN+W++
Sbjct: 196 TESTFEQMRKKGFATDTLPFNVLMNFYVDAEEAEKVSILIDEMMERNVAFDVCTYNIWIK 255
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 261
+ AA+ D E+V +M RD V A+WTT++ LAS++++ G EKAE +LKE E R
Sbjct: 256 SCAAMQDADAMEQVFNQMIRDETVVANWTTYTTLASMHIKLGNSEKAEESLKEAEKRTTG 315
Query: 262 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 321
R+ + +L+TLY G EVYR+W + FP N+ Y ++ LV L D+ GAE
Sbjct: 316 REKKCFHYLMTLYSHLGKKEEVYRVWNWYKATFPTIHNLGYQEVLSALVRLGDIEGAELL 375
Query: 322 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 381
++EW S +++D + N+++ YA+EG + AE+ R +G +P TWEI YL+
Sbjct: 376 YEEWASKSSSFDPKTMNILLAWYAREGFVTKAEQTLNRFVEKGGNPKPNTWEILGTAYLK 435
Query: 382 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVD 441
+G A+ CLEKA T KW P + + + +F+++ D + A+ + +L+
Sbjct: 436 DGQSSEALSCLEKA--TAVASPSKWRPRPTNVESLLANFKEKNDAESADRLMNVLRSRRC 493
Query: 442 DLGVEVFEPLIRTY 455
+ E ++ LI TY
Sbjct: 494 EEN-EEYKSLINTY 506
>gi|297603118|ref|NP_001053460.2| Os04g0544400 [Oryza sativa Japonica Group]
gi|255675659|dbj|BAF15374.2| Os04g0544400 [Oryza sativa Japonica Group]
Length = 571
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 147/416 (35%), Positives = 238/416 (57%), Gaps = 5/416 (1%)
Query: 24 ALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEK 83
+LY R+ G V + L + + ++R+ KWE+ ++LR + + AL++ + M +
Sbjct: 77 SLYRRI-AVGHGGRPVGRTLGAWDEGERRLDKWELCRIARELRKFRRFNLALQVYDWMTE 135
Query: 84 RG--MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEK 141
R + + SD AI LDL+AKV+G+ AE YF +LP+ K+ TYGSLLN Y + +M EK
Sbjct: 136 RRDRFSLSSSDMAIQLDLIAKVRGVSHAEEYFEELPDPLKDKRTYGSLLNVYAQAMMKEK 195
Query: 142 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 201
E+ E+M++ ++PFN LM Y EK+ +I EM ++ D TYN+W++
Sbjct: 196 TESTFEQMRKKGFATDTLPFNVLMNFYVDAEEAEKVSILIDEMMERNVAFDVCTYNIWIK 255
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 261
+ AA+ D E+V +M RD V A+WTT++ LAS++++ G EKAE +LKE E R
Sbjct: 256 SCAAMQDADAMEQVFNQMIRDETVVANWTTYTTLASMHIKLGNSEKAEESLKEAEKRTTG 315
Query: 262 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 321
R+ + +L+TLY G EVYR+W + FP N+ Y ++ LV L D+ GAE
Sbjct: 316 REKKCFHYLMTLYSHLGKKEEVYRVWNWYKATFPTIHNLGYQEVLSALVRLGDIEGAELL 375
Query: 322 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 381
++EW S +++D + N+++ YA+EG + AE+ R +G +P TWEI YL+
Sbjct: 376 YEEWASKSSSFDPKTMNILLAWYAREGFVTKAEQTLNRFVEKGGNPKPNTWEILGTAYLK 435
Query: 382 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 437
+G A+ CLEKA T KW P + + + +F+++ D + A+ + +L+
Sbjct: 436 DGQSSEALSCLEKA--TAVASPSKWRPRPTNVESLLANFKEKNDAESADRLMNVLR 489
>gi|449432307|ref|XP_004133941.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Cucumis sativus]
gi|449525818|ref|XP_004169913.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Cucumis sativus]
Length = 537
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 154/418 (36%), Positives = 232/418 (55%), Gaps = 6/418 (1%)
Query: 24 ALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEK 83
A+Y R+ + ++ LNQ+ K + KWE+ +K+LR K + AL++ + M
Sbjct: 71 AIYRRISLMENPELGSASVLNQWENEGKNITKWELSRVVKELRKYKRFERALEIYDWMSN 130
Query: 84 RG--MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEK 141
R T SD AI LDL++KV+GI +AE YF+ LP K+ YG+LLN Y K EK
Sbjct: 131 REERFRLTTSDAAIQLDLISKVRGIKSAEEYFLRLPNHLKDRRIYGALLNAYAKGRQREK 190
Query: 142 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 201
AE LLEKM+ +PFN +MTLY EK+ +++ EM +SI D Y+YN+W+
Sbjct: 191 AENLLEKMRTKGFTTHPLPFNVMMTLYMNVKEYEKVESLVSEMTENSIQLDIYSYNIWLS 250
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 261
+ E V E+MK+D + A+WTTFS +A++Y++ GL EKAE L+ +E+R
Sbjct: 251 SCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLMEKAEECLRRVESRIVG 310
Query: 262 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 321
RD Y +LI+LYG GN E+YR+W + FP N+ Y +I L+ + D+ GAEK
Sbjct: 311 RDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALIRVGDVEGAEKI 370
Query: 322 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 381
++EW + +TYD R+ N+ IG Y KEG AE + G PN+ TWEI D + +
Sbjct: 371 YEEWLTVKSTYDPRIANLFIGWYVKEGNTSKAESFFDHMVEVGGKPNSSTWEILVDRHTK 430
Query: 382 NGDMKLAVDCLEKAIDTGRGDGGK-WVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 438
G + A+ ++A +G K W P + + E+E D+ E + +L++
Sbjct: 431 EGRVSDALASWKEAFS---AEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLVGLLRQ 485
>gi|147807263|emb|CAN64166.1| hypothetical protein VITISV_006333 [Vitis vinifera]
Length = 506
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 160/485 (32%), Positives = 272/485 (56%), Gaps = 6/485 (1%)
Query: 4 PQRFGRTKNIAKRS---KKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGD 60
PQ R I+ R+ ++ + +LY+++ G + SV +L+ ++++ +V+ E+
Sbjct: 17 PQSLIRKNPISNRTYYTSRYGKISLYNKISPLGDPNTSVVPELDNWVQNGNKVWVAELQR 76
Query: 61 TLKKLRDRKLYYPALKLSENMEKRGMNK-TVSDQAIHLDLVAKVQGIDAAENYFVDLPET 119
+ LR RK + AL++SE M K+G+ + ++ A+ LDL+ +V+G +AE+YF L
Sbjct: 77 IIHDLRKRKRFSQALEISEWMSKKGICAFSPTEHAVQLDLIGRVRGFLSAESYFNSLQNH 136
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
K TYG+LLNCY ++ T+K+ + L+KMKE+ S + +N +M LY G EK+P
Sbjct: 137 DKTDKTYGALLNCYVRQRQTDKSLSHLQKMKEMGFASSPLTYNDIMCLYTNVGQHEKVPD 196
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
++ EMK S + PD+++Y + + + AA +DI G E+V++EM+R + DW T++ A+ Y
Sbjct: 197 VLTEMKQSHVYPDNFSYRICINSYAAQSDIQGMEKVLKEMERQPHIVMDWNTYAVAANFY 256
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
++AGL +KA ALK+ E R RD Y LI+LY GN +EV R+W + A N
Sbjct: 257 IKAGLPDKAIEALKKSEERLDKRDGLGYNHLISLYASLGNKAEVLRLWSLEKSACKRNIN 316
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
Y+ M++ LV L +L AEK +EWES YD RV N++I Y+++G E AE + +
Sbjct: 317 RDYITMLESLVRLGELEEAEKVLREWESSGNCYDFRVPNIVIIGYSEKGLFEKAEAMLKE 376
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
+G +W + Y+ G+M+ AV+C++ AI + G+ P+S I +
Sbjct: 377 LMEKGKITTPDSWGTVASGYMDEGEMEKAVECMKAAISLHVNNKGR-KPNSRVIAGILSW 435
Query: 420 FEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEA 479
+ V+ E F+ L+ + + ++ LI AG+ +L +K +K+ E
Sbjct: 436 LGDKGRVEDVEAFVGSLRIVI-PMNRRMYHTLIMANIRAGKEVDGLLASMKADKIVEDEE 494
Query: 480 SKKLL 484
+KK+L
Sbjct: 495 TKKIL 499
>gi|326493098|dbj|BAJ85010.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510377|dbj|BAJ87405.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 505
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 156/440 (35%), Positives = 241/440 (54%), Gaps = 12/440 (2%)
Query: 24 ALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEK 83
+LY R+ G V + L + + ++R+ KWE+ ++LR + + AL++ + M
Sbjct: 69 SLYRRV-AVGHGGRPVGRTLADWDEGERRLDKWELCRIARELRKFRRFNLALEVYDWMTD 127
Query: 84 RG--MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEK 141
R + + SD AI LDL+AKV+G+ AE YF LP+ K+ TYGSLLN Y + M EK
Sbjct: 128 RRDRFSLSSSDMAIQLDLIAKVRGVPDAEEYFEKLPDPLKDKRTYGSLLNVYAQARMKEK 187
Query: 142 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 201
E E+M++ ++PFN LM Y PEK+ + EMK +I D TYN+W++
Sbjct: 188 TEYTFEQMRKKGFATDTLPFNVLMNFYVDVAEPEKVSTVTDEMKQRNISFDVCTYNIWIK 247
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 261
AA+ D ERV+ +M D V A+WTT++ LAS++++ FEKAE LKE E R
Sbjct: 248 CCAAMKDADAMERVLNQMTADESVVANWTTYTTLASMHIKLENFEKAEECLKEAEKRATG 307
Query: 262 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 321
RD + FLITLY EVYRIW + F N+ Y ++ LV L D+ GAE
Sbjct: 308 RDKKCFHFLITLYSHLQKKEEVYRIWNWYKATFKTIHNLGYQEVLSALVRLGDIEGAELL 367
Query: 322 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 381
++EW S +++D + N+++ Y++EG + A++ R +G +P TWEI + YL+
Sbjct: 368 YEEWASKSSSFDPKTMNILLAWYSREGFVVKAQQTLNRFVEKGGNPKPNTWEILATAYLK 427
Query: 382 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVD 441
+ + A+ CLEKA T KW P + T + +F+++ D + + + +L+
Sbjct: 428 DNQLSEALSCLEKA--TAVKSASKWRPRPTNVETLLAYFKEKNDTESVDRLMSVLRSR-- 483
Query: 442 DLGV---EVFEPLIRTYAAA 458
G E ++ LI TYA A
Sbjct: 484 --GCAENEEYKSLIDTYALA 501
>gi|224137116|ref|XP_002327026.1| predicted protein [Populus trichocarpa]
gi|222835341|gb|EEE73776.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 152/416 (36%), Positives = 236/416 (56%), Gaps = 9/416 (2%)
Query: 24 ALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEK 83
+Y R+ + ++ LN++ KR+ KWE+ +K+LR K Y AL++ + M+
Sbjct: 70 GIYRRISLMENPELGSGSVLNRWENEGKRLTKWELCRVVKELRKYKRYQQALEVYDWMKN 129
Query: 84 RG--MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEK 141
R + SD AI LDL+AKV+G+ AE++F+ LP T K+ YG+LLN Y + M EK
Sbjct: 130 RQERFRLSPSDAAIQLDLIAKVRGVSTAEDFFLSLPNTFKDRRVYGALLNAYVQNRMREK 189
Query: 142 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 201
AE L ++M++ ++PFN MTLY +K+ +I EM +I D Y+YN+W+
Sbjct: 190 AETLFDEMRDKGYVTHALPFNVTMTLYMNIKEYDKVDLMISEMNEKNIKLDIYSYNIWLS 249
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 261
+ + E+V E+MK D + +WTTFS +A++Y++ G FEKAE L+ +E+R
Sbjct: 250 SCGSQGSADKMEQVYEQMKSDRSINPNWTTFSTMATMYIKMGQFEKAEDCLRRVESRITG 309
Query: 262 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 321
RD Y +L++LYG GN EVYR+W + FP+ N+ Y +I LV L D+ GAEK
Sbjct: 310 RDRIPYHYLLSLYGNVGNKEEVYRVWNIYKSIFPSIPNLGYHAIISSLVRLDDIEGAEKI 369
Query: 322 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 381
++EW S +YD R+ N+ I AY +G L+ A+ + G PN+ TWEI + ++
Sbjct: 370 YEEWLSIKTSYDPRIANLFIAAYVYQGNLDEAKSFFDHMLEDGGKPNSNTWEILAQGHIS 429
Query: 382 NGDMKLAVDCLEKAIDTGRGDGGK-WVPSSETIRTFMRHFEQEKDV---DGAEGFL 433
A+ CL++A T G K W P+ + +F + E+E D+ + EGFL
Sbjct: 430 ERRTSEALSCLKEAFVT---PGSKSWKPNPANVTSFFKLCEEEADMANKEALEGFL 482
>gi|326498623|dbj|BAK02297.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 505
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 155/440 (35%), Positives = 240/440 (54%), Gaps = 12/440 (2%)
Query: 24 ALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEK 83
+LY R+ G V + L + + ++R+ KWE+ ++LR + + AL++ + M
Sbjct: 69 SLYRRV-AVGHGGRPVGRTLADWDEGERRLDKWELCRIARELRKFRRFNLALEVYDWMTD 127
Query: 84 RG--MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEK 141
R + + SD AI LDL+AKV+G+ E YF LP+ K+ TYGSLLN Y + M EK
Sbjct: 128 RRDRFSLSSSDMAIQLDLIAKVRGVPDTEEYFEKLPDPLKDKRTYGSLLNVYAQARMKEK 187
Query: 142 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 201
E E+M++ ++PFN LM Y PEK+ + EMK +I D TYN+W++
Sbjct: 188 TEYTFEQMRKKGFATDTLPFNVLMNFYVDVAEPEKVSTVTDEMKQRNISFDVCTYNIWIK 247
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 261
AA+ D ERV+ +M D V A+WTT++ LAS++++ FEKAE LKE E R
Sbjct: 248 CCAAMKDADAMERVLNQMTADESVVANWTTYTTLASMHIKLENFEKAEECLKEAEKRATG 307
Query: 262 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 321
RD + FLITLY EVYRIW + F N+ Y ++ LV L D+ GAE
Sbjct: 308 RDKKCFHFLITLYSHLQKKEEVYRIWNWYKATFKTIHNLGYQEVLSALVRLGDIEGAELL 367
Query: 322 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 381
++EW S +++D + N+++ Y++EG + A++ R +G +P TWEI + YL+
Sbjct: 368 YEEWASKSSSFDPKTMNILLAWYSREGFVVKAQQTLNRFVEKGGNPKPNTWEILATAYLK 427
Query: 382 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVD 441
+ + A+ CLEKA T KW P + T + +F+++ D + + + +L+
Sbjct: 428 DNQLSEALSCLEKA--TAVKSASKWRPRPTNVETLLAYFKEKNDTESVDRLMSVLRSR-- 483
Query: 442 DLGV---EVFEPLIRTYAAA 458
G E ++ LI TYA A
Sbjct: 484 --GCAENEEYKSLIDTYALA 501
>gi|297737393|emb|CBI26594.3| unnamed protein product [Vitis vinifera]
Length = 529
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 156/441 (35%), Positives = 258/441 (58%), Gaps = 11/441 (2%)
Query: 53 VFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVS-DQAIHLDLVAKVQGIDAAEN 111
V K+E+ +++LR K Y AL++ E M K+ K ++ D A+HLDL+AK++G+ +AE
Sbjct: 86 VRKYELNRIVRELRKLKRYKHALEICEWMTKQHDIKLLAGDYAVHLDLIAKIRGLASAEK 145
Query: 112 YFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKT 171
+F DL + K T +LL+ Y + ++EKAEAL+EKM E +P+N +++LY
Sbjct: 146 FFEDLSDKMKGQPTCTALLHTYVQNKVSEKAEALMEKMSECGFLKCPLPYNHMISLYISD 205
Query: 172 GHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTT 231
G EK+P +IQE+K ++ PD TYN+W+ A+ ND+ AE+V+ E+K+ ++ DW T
Sbjct: 206 GQLEKVPGMIQELKKNT-SPDVVTYNLWLTVCASQNDVETAEKVLLEIKK-AKIDPDWVT 263
Query: 232 FSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 291
+S+L ++Y++ GL +KA L E+E R + + AY LI+L+ + V+RIW+ L+
Sbjct: 264 YSSLTNLYIKKGLLDKAATTLNEMEKRTSRKGRIAYSSLISLHTNMQDKDGVHRIWKKLK 323
Query: 292 LAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLE 351
F + Y MI LV L + AE + EW S T D RV N+++ AY + +E
Sbjct: 324 SIFHKMNDAEYTCMISSLVKLGEFEEAENLYSEWTSVSPTGDSRVPNILLAAYINKNEME 383
Query: 352 NAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSE 411
AE+ + RG P+ TWE+ + YL+ M+ +D EKA+ G KW P +
Sbjct: 384 MAEKFYNQMVERGITPSYTTWELLTWGYLKKKQMEKVLDYFEKAV----GSVKKWNPDEK 439
Query: 412 TIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKM 471
+R ++ E++ +++GAE L IL+KA + E++ L+R YA AG+ ++ +K
Sbjct: 440 LVREVYKNLEEQGNIEGAEKVLVILRKA-GHVSTEIYNWLLRAYAKAGKMPLIVAEWMKK 498
Query: 472 EKVEVSEASKKLLE---AICV 489
+KVE+ E + +L++ +CV
Sbjct: 499 DKVEMDEETHRLIKETSKMCV 519
>gi|359483464|ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Vitis vinifera]
Length = 506
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 159/485 (32%), Positives = 271/485 (55%), Gaps = 6/485 (1%)
Query: 4 PQRFGRTKNIAKRS---KKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGD 60
PQ R I+ R+ ++ + +LY+++ G + SV +L+ ++++ +V+ E+
Sbjct: 17 PQSLIRKNPISNRTYYTSRYGKISLYNKISPLGDPNTSVVPELDNWVQNGNKVWVAELQR 76
Query: 61 TLKKLRDRKLYYPALKLSENMEKRGMNK-TVSDQAIHLDLVAKVQGIDAAENYFVDLPET 119
+ LR RK + AL++SE M K+G+ + ++ A+ LDL+ +V+G +AE+YF L
Sbjct: 77 IIHDLRKRKRFSQALEISEWMSKKGICAFSPTEHAVQLDLIGRVRGFLSAESYFNSLQNH 136
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
K TYG+LLNCY ++ T+K+ + L+KMKE+ S + +N +M LY G EK+P
Sbjct: 137 DKTDKTYGALLNCYVRQRQTDKSLSHLQKMKEMGFASSPLTYNDIMCLYTNVGQHEKVPD 196
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
++ EMK S++ PD+++Y + + + A +DI G E V++EM+R + DW T++ A+ Y
Sbjct: 197 VLTEMKQSNVYPDNFSYRICINSYGAQSDIQGMENVLKEMERQPHIVMDWNTYAVAANFY 256
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
++AGL +KA ALK+ E R RD Y LI+LY GN +EV R+W + A N
Sbjct: 257 IKAGLPDKAIEALKKSEERLDKRDGLGYNHLISLYASLGNKAEVLRLWSLEKSACKRNIN 316
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
Y+ M++ LV L +L AEK +EWES YD RV N++I Y+++G E AE + +
Sbjct: 317 RDYITMLESLVRLGELEEAEKVLREWESSGNCYDFRVPNIVIIGYSEKGLFEKAEAMLKE 376
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
+G +W + Y+ G+M+ AV+C++ AI + G+ P+S I +
Sbjct: 377 LMEKGKITTPNSWGTVASGYMDEGEMEKAVECMKAAISLHVNNKGR-KPNSRVIAGILSW 435
Query: 420 FEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEA 479
+ V+ E F+ L+ + + ++ LI AG+ +L +K +K+ E
Sbjct: 436 LGDKGRVEDVEAFVGSLRIVI-PMNRRMYHTLIMANIRAGKEVDGLLASMKADKIVEDEE 494
Query: 480 SKKLL 484
+KK+L
Sbjct: 495 TKKIL 499
>gi|359490027|ref|XP_002279399.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 156/441 (35%), Positives = 258/441 (58%), Gaps = 11/441 (2%)
Query: 53 VFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVS-DQAIHLDLVAKVQGIDAAEN 111
V K+E+ +++LR K Y AL++ E M K+ K ++ D A+HLDL+AK++G+ +AE
Sbjct: 199 VRKYELNRIVRELRKLKRYKHALEICEWMTKQHDIKLLAGDYAVHLDLIAKIRGLASAEK 258
Query: 112 YFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKT 171
+F DL + K T +LL+ Y + ++EKAEAL+EKM E +P+N +++LY
Sbjct: 259 FFEDLSDKMKGQPTCTALLHTYVQNKVSEKAEALMEKMSECGFLKCPLPYNHMISLYISD 318
Query: 172 GHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTT 231
G EK+P +IQE+K ++ PD TYN+W+ A+ ND+ AE+V+ E+K+ ++ DW T
Sbjct: 319 GQLEKVPGMIQELKKNT-SPDVVTYNLWLTVCASQNDVETAEKVLLEIKK-AKIDPDWVT 376
Query: 232 FSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 291
+S+L ++Y++ GL +KA L E+E R + + AY LI+L+ + V+RIW+ L+
Sbjct: 377 YSSLTNLYIKKGLLDKAATTLNEMEKRTSRKGRIAYSSLISLHTNMQDKDGVHRIWKKLK 436
Query: 292 LAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLE 351
F + Y MI LV L + AE + EW S T D RV N+++ AY + +E
Sbjct: 437 SIFHKMNDAEYTCMISSLVKLGEFEEAENLYSEWTSVSPTGDSRVPNILLAAYINKNEME 496
Query: 352 NAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSE 411
AE+ + RG P+ TWE+ + YL+ M+ +D EKA+ G KW P +
Sbjct: 497 MAEKFYNQMVERGITPSYTTWELLTWGYLKKKQMEKVLDYFEKAV----GSVKKWNPDEK 552
Query: 412 TIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKM 471
+R ++ E++ +++GAE L IL+KA + E++ L+R YA AG+ ++ +K
Sbjct: 553 LVREVYKNLEEQGNIEGAEKVLVILRKA-GHVSTEIYNWLLRAYAKAGKMPLIVAEWMKK 611
Query: 472 EKVEVSEASKKLLE---AICV 489
+KVE+ E + +L++ +CV
Sbjct: 612 DKVEMDEETHRLIKETSKMCV 632
>gi|297848282|ref|XP_002892022.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337864|gb|EFH68281.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 523
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 149/418 (35%), Positives = 235/418 (56%), Gaps = 4/418 (0%)
Query: 24 ALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEK 83
A+Y ++ ++ LNQ+ K +++ KWE+ +K+LR K AL++ + M
Sbjct: 67 AIYKKISLMEKPELGAASVLNQWEKGGRKLTKWELCRVVKELRKYKRPNQALEVYDWMNN 126
Query: 84 RG--MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEK 141
RG + SD AI LDL+ KV+GI AE +F+ LPE K+ YGSLLN Y + EK
Sbjct: 127 RGERFRLSASDAAIQLDLIGKVRGISDAEQFFLTLPENFKDRRVYGSLLNAYVRAKSREK 186
Query: 142 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 201
AEALL M++ +PFN +MTLY +K+ A++ EMK I D Y+YN+W+
Sbjct: 187 AEALLHTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLS 246
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 261
+ ++ + E V ++MK D + +WTTFS +A++Y++ G EKAE AL+++E R
Sbjct: 247 SCGSLGSVEKMELVYQQMKSDVSINPNWTTFSTMATMYIKMGETEKAEDALRKVEARITG 306
Query: 262 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 321
R+ Y +L++LYG GN E+YR+W + P+ N+ Y ++ L + D+ GAEK
Sbjct: 307 RNRIPYHYLLSLYGSVGNKKELYRVWNVYKSVVPSIPNLGYHALVSSLARMGDIEGAEKV 366
Query: 322 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 381
++EW ++YD R+ N+++ Y K +LE AE L + G P++ TWEI +D + R
Sbjct: 367 YEEWLPVKSSYDPRIPNLLMNVYVKNDQLEKAEGLFDHMVEMGGKPSSSTWEILADGHTR 426
Query: 382 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 439
+ A+ CL KA + G W P + F + E+E DV E LE+L+++
Sbjct: 427 KRCIPEALTCLRKAF-SAEG-SSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQS 482
>gi|218195308|gb|EEC77735.1| hypothetical protein OsI_16848 [Oryza sativa Indica Group]
Length = 1300
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 146/409 (35%), Positives = 234/409 (57%), Gaps = 5/409 (1%)
Query: 24 ALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEK 83
+LY R+ G V + L + + ++R+ KWE+ ++LR + + AL++ + M +
Sbjct: 77 SLYRRI-AVGHGGRPVGRTLGAWDEGERRLDKWELCRIARELRKFRRFNLALQVYDWMTE 135
Query: 84 RG--MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEK 141
R + + SD AI LDL+AKV+G+ AE YF +LP+ K+ TYGSLLN Y + +M EK
Sbjct: 136 RRDRFSLSSSDMAIQLDLIAKVRGVSHAEEYFEELPDPLKDKRTYGSLLNVYAQAMMKEK 195
Query: 142 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 201
E+ E+M++ ++PFN LM Y EK+ +I EM ++ D TYN+W++
Sbjct: 196 TESTFEQMRKKGFATDTLPFNVLMNFYVDAEEAEKVSILIDEMMERNVAFDVCTYNIWIK 255
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 261
+ AA+ D E+V +M RD V A+WTT++ LAS++++ G EKAE +LKE E R
Sbjct: 256 SCAAMQDADAMEQVFNQMIRDETVVANWTTYTTLASMHIKLGNSEKAEESLKEAEKRTTG 315
Query: 262 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 321
R+ + +L+TLY G EVYR+W + FP N+ Y ++ LV L D+ GAE
Sbjct: 316 REKKCFHYLMTLYSHLGKKEEVYRVWNWYKATFPTIHNLGYQEVLSALVRLGDIEGAELL 375
Query: 322 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 381
++EW S +++D + N+++ YA+EG + AE+ R +G +P TWEI YL+
Sbjct: 376 YEEWASKSSSFDPKTMNILLAWYAREGFVTKAEQTLNRFVEKGGNPKPNTWEILGTAYLK 435
Query: 382 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 430
+G A+ CLEKA T KW P + + + +F+++ D + A+
Sbjct: 436 DGQSSEALSCLEKA--TAVASPSKWRPRPTNVESLLANFKEKNDAESAD 482
>gi|22329290|ref|NP_171717.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806400|sp|Q8LPS6.2|PPR3_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g02150
gi|2317908|gb|AAC24372.1| Unknown protein [Arabidopsis thaliana]
gi|332189272|gb|AEE27393.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 524
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 150/420 (35%), Positives = 237/420 (56%), Gaps = 4/420 (0%)
Query: 24 ALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEK 83
A+Y ++ ++ LNQ+ K+ +++ KWE+ +K+LR K AL++ + M
Sbjct: 68 AIYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNN 127
Query: 84 RG--MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEK 141
RG + SD AI LDL+ KV+GI AE +F+ LPE K+ YGSLLN Y + EK
Sbjct: 128 RGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREK 187
Query: 142 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 201
AEALL M++ +PFN +MTLY +K+ A++ EMK I D Y+YN+W+
Sbjct: 188 AEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLS 247
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 261
+ ++ + E V ++MK D + +WTTFS +A++Y++ G EKAE AL+++E R
Sbjct: 248 SCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITG 307
Query: 262 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 321
R+ Y +L++LYG GN E+YR+W + P+ N+ Y ++ LV + D+ GAEK
Sbjct: 308 RNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKV 367
Query: 322 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 381
++EW ++YD R+ N+++ AY K +LE AE L + G P++ TWEI + + R
Sbjct: 368 YEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTR 427
Query: 382 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVD 441
+ A+ CL A + G W P + F + E+E DV E LE+L+++ D
Sbjct: 428 KRCISEALTCLRNAF-SAEG-SSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSGD 485
>gi|255571041|ref|XP_002526471.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534146|gb|EEF35862.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 152/416 (36%), Positives = 237/416 (56%), Gaps = 7/416 (1%)
Query: 24 ALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEK 83
++Y R+ ++ LN+ K K++ KWE+ +K+LR K + AL++ + M
Sbjct: 70 SVYRRISLMEKPELGAATVLNEMEKDGKKLTKWELCRVVKELRKYKRHKQALEVYDWMNN 129
Query: 84 RG--MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEK 141
R + SD AI LDLVAKV+G+ +AE+YF+ L + K+ YG+LLN Y K M EK
Sbjct: 130 REERFRLSASDAAIQLDLVAKVRGVSSAEDYFMRLSDNVKDRRVYGALLNSYVKARMREK 189
Query: 142 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 201
AE+L+EKM++ + ++PFN +MTLY +K+ +I EM A +I D Y+YN+W+
Sbjct: 190 AESLIEKMRKKDYTTHALPFNVMMTLYMNLKEYDKVDMMISEMMAKNIRLDIYSYNIWLS 249
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 261
+ + I E V E+MK D + +WTTFS +A++Y++ G EKAE L+ +E+R
Sbjct: 250 SRGSQGSIERMEEVYEQMKLDSTINPNWTTFSTMATMYIKMGQLEKAEDCLRRVESRITG 309
Query: 262 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 321
RD Y +L++LYG GN E+YR+W + F N+ Y +I LV + D+ GAEK
Sbjct: 310 RDRIPYHYLLSLYGNVGNKEEIYRVWNIYKSIFATIPNLGYHAIISSLVRMDDIEGAEKI 369
Query: 322 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 381
++EW ++YD R+ N+++G Y + G L+ AE + G PN+ TWEI +D + R
Sbjct: 370 YEEWLPVKSSYDPRIGNLLMGWYVRGGNLDKAESFFDHMMEVGGKPNSSTWEILADGHTR 429
Query: 382 NGDMKLAVDCLEKAIDTGRGDGGK-WVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 436
+ A+ C ++A G K W P I +F + E+E D+ + G LE L
Sbjct: 430 EKRISEALSCFKEAF---LAQGSKSWKPKPVIISSFFKLCEEEADM-ASTGVLEDL 481
>gi|20453085|gb|AAM19786.1| At1g02150/T7I23.8 [Arabidopsis thaliana]
gi|29028736|gb|AAO64747.1| At1g02150/T7I23.8 [Arabidopsis thaliana]
Length = 524
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 149/420 (35%), Positives = 237/420 (56%), Gaps = 4/420 (0%)
Query: 24 ALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEK 83
A+Y ++ ++ LNQ+ K+ +++ KWE+ +K+LR K A+++ + M
Sbjct: 68 AIYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQAIEVYDWMNN 127
Query: 84 RG--MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEK 141
RG + SD AI LDL+ KV+GI AE +F+ LPE K+ YGSLLN Y + EK
Sbjct: 128 RGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREK 187
Query: 142 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 201
AEALL M++ +PFN +MTLY +K+ A++ EMK I D Y+YN+W+
Sbjct: 188 AEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLS 247
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 261
+ ++ + E V ++MK D + +WTTFS +A++Y++ G EKAE AL+++E R
Sbjct: 248 SCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITG 307
Query: 262 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 321
R+ Y +L++LYG GN E+YR+W + P+ N+ Y ++ LV + D+ GAEK
Sbjct: 308 RNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKV 367
Query: 322 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 381
++EW ++YD R+ N+++ AY K +LE AE L + G P++ TWEI + + R
Sbjct: 368 YEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTR 427
Query: 382 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVD 441
+ A+ CL A + G W P + F + E+E DV E LE+L+++ D
Sbjct: 428 KRCISEALTCLRNAF-SAEG-SSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSGD 485
>gi|147804811|emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]
Length = 1111
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 154/434 (35%), Positives = 255/434 (58%), Gaps = 8/434 (1%)
Query: 53 VFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVS-DQAIHLDLVAKVQGIDAAEN 111
V K+E+ +++LR K Y AL++ E M K+ K ++ D A+HLDL+AK++G+ +AE
Sbjct: 86 VRKYELNRIVRELRKLKRYKHALEICEWMTKQHDIKLLAGDYAVHLDLIAKIRGLASAEK 145
Query: 112 YFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKT 171
+F DL + K T +LL+ Y + ++EKAEAL+EKM E +P+N +++LY
Sbjct: 146 FFEDLSDKMKGQPTCTALLHTYVQNKVSEKAEALMEKMSECGFLKCPLPYNHMISLYISD 205
Query: 172 GHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTT 231
G EK+P +IQE+K ++ PD TYN+W+ A+ ND+ AE+V+ E+K+ ++ DW T
Sbjct: 206 GQLEKVPGMIQELKKNT-SPDVVTYNLWLTVCASQNDVETAEKVLLEIKK-AKIDPDWVT 263
Query: 232 FSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 291
+S+L ++Y++ GL +KA L E+E R + + AY LI+L+ + V+RIW+ L+
Sbjct: 264 YSSLTNLYIKKGLLDKAATTLNEMEKRTSRKGRIAYSSLISLHTNMQDKDGVHRIWKKLK 323
Query: 292 LAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLE 351
F + Y MI LV L + AE + EW S T D RV N+++ AY + +E
Sbjct: 324 SIFHKMNDAEYTCMISSLVKLGEFEEAENLYSEWTSVSPTGDSRVPNILLAAYINKNEME 383
Query: 352 NAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSE 411
AE+ + RG P+ TWE+ + YL+ M+ +D EKA+ G KW P +
Sbjct: 384 MAEKFYNQMVERGITPSYTTWELLTWGYLKKKQMEKVLDYFEKAV----GSVKKWNPDEK 439
Query: 412 TIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKM 471
+R ++ E++ +++GAE L IL+KA + E++ L+R YA AG+ ++ +K
Sbjct: 440 LVREVYKNLEEQGNIEGAEKVLVILRKA-GHVSTEIYNWLLRAYAKAGKMPLIVAEWMKK 498
Query: 472 EKVEVSEASKKLLE 485
+KVE+ E + +L++
Sbjct: 499 DKVEMDEETHRLIK 512
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 118/278 (42%), Gaps = 24/278 (8%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ + +LL+ YCK + AE ++ E N +N +++ Y K G K +
Sbjct: 702 DQMVQNALLSMYCKFGFLKLAEKFFGRVNEQNFE----AWNLMVSGYGKIGLIMKCIGLF 757
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR---DGRVAADWTTFSNLASI 238
+EM+ I DS + + + + + A + M + D V+ + ++L +
Sbjct: 758 REMQCLGIESDSNSLVSVVSSCSQLGATHLARSIHCYMIKNLMDENVSVN----NSLIDM 813
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPN 296
Y ++G A R + RD+ + LI+ Y G+ +E ++ + L PN
Sbjct: 814 YGKSGNLTIARRIFCRIP-----RDIVTWNTLISSYAHCGHFAEALSLYDKMVLEDLKPN 868
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
+A + + ++ +L L EK G +++ + +I YAK G+LE + E+
Sbjct: 869 SATL--VXVLSACSHLASLEEGEKVHNYINGGKFEFNLSIATALIDMYAKCGQLEKSREI 926
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
R + TW + Y +GD + A++ ++
Sbjct: 927 FNSMHER----DVITWNVMISGYGMHGDARSAIEXFQQ 960
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 47/267 (17%), Positives = 111/267 (41%), Gaps = 10/267 (3%)
Query: 159 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 218
+ +N+L++ YA GH + ++ +M + P+S T + A + + + E+V
Sbjct: 835 VTWNTLISSYAHCGHFAEALSLYDKMVLEDLKPNSATLVXVLSACSHLASLEEGEKV-HN 893
Query: 219 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 278
G+ + + + L +Y + G EK+ +E+ N RD+ + +I+ YG G
Sbjct: 894 YINGGKFEFNLSIATALIDMYAKCGQLEKS----REIFNSMHERDVITWNVMISGYGMHG 949
Query: 279 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 338
+ ++ + + +++L ++ + + + F + + +++
Sbjct: 950 DARSAIEXFQQMEESSAKPNGLTFLAVLSACAHAGLVKEGKYLFGKMQDYSVAPNLKHYA 1009
Query: 339 VMIGAYAKEGRLENAEELKERARRRGADPNAKTW-EIFSDYYLRNGDMKLAVDCLEKAID 397
M+ + G L+ AE L P+ W + S + N ++++ + + AI
Sbjct: 1010 CMVDLLGRSGNLQEAEAL---VLSMPISPDGGVWGALLSSCKIHN-EIEMGIRIAKHAIX 1065
Query: 398 TGRGDGGKWVPSSETIRTFMRHFEQEK 424
+ + G +V S + + E EK
Sbjct: 1066 SDVENDGYYVMISNMYSSIGKWEEAEK 1092
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 13/145 (8%)
Query: 151 ELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDIS 210
E NL ++ +L+ +YAK G EK I M D T+NV + D
Sbjct: 901 EFNLSIAT----ALIDMYAKCGQLEKSREIFNSMHER----DVITWNVMISGYGMHGDAR 952
Query: 211 GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 270
A ++M+ + + TF + S AGL ++ + ++++ + +L Y +
Sbjct: 953 SAIEXFQQME-ESSAKPNGLTFLAVLSACAHAGLVKEGKYLFGKMQDYSVAPNLKHYACM 1011
Query: 271 ITLYGQTGNLSEVYRIWRSLRLAFP 295
+ L G++GNL E +L L+ P
Sbjct: 1012 VDLLGRSGNLQEA----EALVLSMP 1032
>gi|125591164|gb|EAZ31514.1| hypothetical protein OsJ_15655 [Oryza sativa Japonica Group]
Length = 531
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 137/366 (37%), Positives = 212/366 (57%), Gaps = 3/366 (0%)
Query: 91 SDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMK 150
SD AI LDL+AKV+G+ AE YF +LP+ K+ TYGSLLN Y + +M EK E+ E+M+
Sbjct: 165 SDMAIQLDLIAKVRGVSHAEEYFEELPDPLKDKRTYGSLLNVYAQAMMKEKTESTFEQMR 224
Query: 151 ELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDIS 210
+ ++PFN LM Y EK+ +I EM ++ D TYN+W+++ AA+ D
Sbjct: 225 KKGFATDTLPFNVLMNFYVDAEEAEKVSILIDEMMERNVAFDVCTYNIWIKSCAAMQDAD 284
Query: 211 GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 270
E+V +M RD V A+WTT++ LAS++++ G EKAE +LKE E R R+ + +L
Sbjct: 285 AMEQVFNQMIRDETVVANWTTYTTLASMHIKLGNSEKAEESLKEAEKRTTGREKKCFHYL 344
Query: 271 ITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCA 330
+TLY G EVYR+W + FP N+ Y ++ LV L D+ GAE ++EW S +
Sbjct: 345 MTLYSHLGKKEEVYRVWNWYKATFPTIHNLGYQEVLSALVRLGDIEGAELLYEEWASKSS 404
Query: 331 TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
++D + N+++ YA+EG + AE+ R +G +P TWEI YL++G A+
Sbjct: 405 SFDPKTMNILLAWYAREGFVTKAEQTLNRFVEKGGNPKPNTWEILGTAYLKDGQSSEALS 464
Query: 391 CLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEP 450
CLEKA T KW P + + + +F+++ D + A+ + +L+ + E ++
Sbjct: 465 CLEKA--TAVASPSKWRPRPTNVESLLANFKEKNDAESADRLMNVLRSRRCEEN-EEYKS 521
Query: 451 LIRTYA 456
LI TYA
Sbjct: 522 LINTYA 527
>gi|225461407|ref|XP_002282230.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial [Vitis vinifera]
Length = 504
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 153/461 (33%), Positives = 261/461 (56%), Gaps = 4/461 (0%)
Query: 25 LYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKR 84
LY R+ G+ ++S+ L+Q+++ K+V E+ ++ LR RK Y AL++SE M +
Sbjct: 39 LYSRISPLGTPNLSLVPVLDQWVEEGKKVRDVELHRIIRDLRSRKRYAQALEVSEWMSSK 98
Query: 85 GMNK-TVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAE 143
+ + S +A+ LDL+ +V+G+++AENYF ++ K YG+LLNCY +E + +K+
Sbjct: 99 ELCPFSPSARAVQLDLIGQVRGLESAENYFNNMSAEEKIDKMYGALLNCYVRERVIDKSL 158
Query: 144 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 203
+ L+KMKEL + +P+N LM LY T EKIP ++ EM+ + I PD+++Y + + +
Sbjct: 159 SHLQKMKELGFASTPLPYNGLMCLYINTDQLEKIPDVLSEMQENGISPDNFSYRLCINSY 218
Query: 204 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 263
A +D++ E+++EEM+ + DW T+S +A+ Y++AGL EKA LK+ E + H+D
Sbjct: 219 GARSDLNSMEKILEEMESKSHIHIDWMTYSMVANFYIKAGLNEKALFFLKKAETK-LHKD 277
Query: 264 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 323
Y LI+LY G+ +E+ R+W + A N Y+ M+ LV L +L E K
Sbjct: 278 PLGYNHLISLYASLGSKAEMMRLWERRKTASKKLINRDYITMLGSLVKLGELEDTEALLK 337
Query: 324 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
EWES YD RV N ++ + ++G +E AE + G P +W I + Y+
Sbjct: 338 EWESSGNCYDFRVPNTLLIGFCQKGLIEKAESMLRDIVEEGKTPTPNSWSIVAAGYIEKQ 397
Query: 384 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDL 443
+M+ A +C+++AI + G W P + I + + +DV+ E F+ L KAV +
Sbjct: 398 NMEKAFECMKEAIAVLAENKG-WRPKPKVISSILSWLGDNRDVEEVETFVSAL-KAVIPM 455
Query: 444 GVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 484
E++ IR AG+ +L +K +K++ E ++K+L
Sbjct: 456 DREMYHAQIRASIRAGKEVDGILDSMKADKIDEDEETRKIL 496
>gi|302143027|emb|CBI20322.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 153/461 (33%), Positives = 261/461 (56%), Gaps = 4/461 (0%)
Query: 25 LYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKR 84
LY R+ G+ ++S+ L+Q+++ K+V E+ ++ LR RK Y AL++SE M +
Sbjct: 39 LYSRISPLGTPNLSLVPVLDQWVEEGKKVRDVELHRIIRDLRSRKRYAQALEVSEWMSSK 98
Query: 85 GMNK-TVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAE 143
+ + S +A+ LDL+ +V+G+++AENYF ++ K YG+LLNCY +E + +K+
Sbjct: 99 ELCPFSPSARAVQLDLIGQVRGLESAENYFNNMSAEEKIDKMYGALLNCYVRERVIDKSL 158
Query: 144 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 203
+ L+KMKEL + +P+N LM LY T EKIP ++ EM+ + I PD+++Y + + +
Sbjct: 159 SHLQKMKELGFASTPLPYNGLMCLYINTDQLEKIPDVLSEMQENGISPDNFSYRLCINSY 218
Query: 204 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 263
A +D++ E+++EEM+ + DW T+S +A+ Y++AGL EKA LK+ E + H+D
Sbjct: 219 GARSDLNSMEKILEEMESKSHIHIDWMTYSMVANFYIKAGLNEKALFFLKKAETK-LHKD 277
Query: 264 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 323
Y LI+LY G+ +E+ R+W + A N Y+ M+ LV L +L E K
Sbjct: 278 PLGYNHLISLYASLGSKAEMMRLWERRKTASKKLINRDYITMLGSLVKLGELEDTEALLK 337
Query: 324 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
EWES YD RV N ++ + ++G +E AE + G P +W I + Y+
Sbjct: 338 EWESSGNCYDFRVPNTLLIGFCQKGLIEKAESMLRDIVEEGKTPTPNSWSIVAAGYIEKQ 397
Query: 384 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDL 443
+M+ A +C+++AI + G W P + I + + +DV+ E F+ L KAV +
Sbjct: 398 NMEKAFECMKEAIAVLAENKG-WRPKPKVISSILSWLGDNRDVEEVETFVSAL-KAVIPM 455
Query: 444 GVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 484
E++ IR AG+ +L +K +K++ E ++K+L
Sbjct: 456 DREMYHAQIRASIRAGKEVDGILDSMKADKIDEDEETRKIL 496
>gi|224085447|ref|XP_002307578.1| predicted protein [Populus trichocarpa]
gi|222857027|gb|EEE94574.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 151/469 (32%), Positives = 269/469 (57%), Gaps = 15/469 (3%)
Query: 25 LYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKR 84
L+ ++ K S+ +++R+ + + V K+E+ +++LR K Y AL++ E M K+
Sbjct: 46 LFSLVYGKRSAVITIRK----WKEEGHNVRKYELNRIVRELRKLKRYKHALEVCEWMTKQ 101
Query: 85 GMNKTV-SDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAE 143
K V D A+HLDL+AK++G+++AE +F D+P+ +++ +LL+ Y + KAE
Sbjct: 102 SDIKLVPGDYAVHLDLIAKIRGLNSAEKFFEDIPDKMRDYQACSALLHVYVQNKSISKAE 161
Query: 144 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 203
AL+EKM E +++P+N ++++Y G EK+ IIQE+K + PD TYN+W+ A
Sbjct: 162 ALMEKMSECGFLKNALPYNHMLSVYVANGQLEKVAEIIQELKKKT-SPDVVTYNMWLTAC 220
Query: 204 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 263
A+ ND+ AE+V E+K+ ++ DW T+S L ++Y++ EKA LKE+E R + ++
Sbjct: 221 ASQNDVETAEKVFMELKK-SKLDPDWVTYSTLTNLYIKKECLEKAAYTLKEVEKRASKKN 279
Query: 264 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 323
Y L++L+ + ++R W ++ F + Y MI LV L + GAE +
Sbjct: 280 RVTYSSLLSLHANMKDKDGLHRTWNKMKSVFNKMNDAEYNCMISSLVKLGEFGGAENLYN 339
Query: 324 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
EWES AT D RV+N+++ +Y ++E+AE +R ++G P TWE+ + +L+
Sbjct: 340 EWESVSATRDSRVSNIVLASYINRNQMEDAENFCQRMVQKGITPCYTTWELLTCGHLKTE 399
Query: 384 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDL 443
M+ ++ +KA+ + R KW P I ++ E+ D++GAE L IL+ A +
Sbjct: 400 QMEKVLENFKKALCSVR----KWTPDKRLIGDIFKNLEERGDIEGAEKLLVILRDA-GHV 454
Query: 444 GVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLE---AICV 489
++ L+RTYA AG+ ++ R++ + VE+ + + KL++ +CV
Sbjct: 455 STMIYNSLLRTYAKAGKMPVIIEERMQKDNVELDDETHKLIQTTSTMCV 503
>gi|326507912|dbj|BAJ86699.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 158/445 (35%), Positives = 251/445 (56%), Gaps = 18/445 (4%)
Query: 25 LYDRLFK--KGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENME 82
LY R+ K +G +V +++++L+ ++R + +V +++L K AL+L + ME
Sbjct: 51 LYKRISKVSQGKPPGTVAAEMDEWLRQRRRPSQLQVLAYVRELTRFKKNESALELLDWME 110
Query: 83 KRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKA 142
RG N + QA+ LDL++KV GI AAE YF +P+ SK+ TY LLNCY K + K
Sbjct: 111 SRGANLSPGHQAMRLDLISKVHGIQAAEEYFWSIPDISKSVKTYSCLLNCYGKHGLAYKG 170
Query: 143 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 202
EKMK ++ + +N LM LY K G PEKI + +EM+ S I D + Y + +
Sbjct: 171 LEFYEKMKAKSIVPDKLVYNYLMILYQKAGQPEKILSTFEEMRESGISADKFAYFTLIES 230
Query: 203 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 262
+ND+ AE+V+ E+++ V W+ ++ +A+ Y++ LF KAE A+K+ E
Sbjct: 231 YITMNDLDAAEKVLAELQKVAPV--HWSLYTLMANNYIKLKLFGKAEVAIKKAEEGMDKA 288
Query: 263 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 322
DL ++ L++L+ GN +EV R+W+SL+ F N SYL M+Q L + D ++ F
Sbjct: 289 DLRSWYALLSLHAHCGNSTEVKRVWKSLKSTFKKCLNRSYLVMLQALSMIDDFESLQQIF 348
Query: 323 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE-----IFSD 377
+EW+S YD R+ NV+I AY +G ++ AE +++ +G W IF++
Sbjct: 349 QEWQSSHEHYDKRIANVVIKAYLDKGMIDEAEAIRQSTMAQG------HWHEGMVCIFAE 402
Query: 378 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 437
+YL D+ A++ L A + KWVPS E + F++H+E+ D GAE FLE LK
Sbjct: 403 FYLDKSDVNAALEILRDAKNMVMAR--KWVPSKELVSRFLKHYEESNDASGAESFLECLK 460
Query: 438 KAVDDLGVEVFEPLIRTYAAAGRTS 462
K ++ L ++ FE +TY AGR S
Sbjct: 461 K-LECLDLDAFEAAKQTYVVAGRAS 484
>gi|147803609|emb|CAN75355.1| hypothetical protein VITISV_002476 [Vitis vinifera]
Length = 736
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 143/365 (39%), Positives = 214/365 (58%), Gaps = 7/365 (1%)
Query: 76 KLSENMEKRG--MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCY 133
K+ E M RG + SD AI LDL+AKV G+ +AE+YF LP+T K+ YG+LLN Y
Sbjct: 320 KVYEWMNNRGERFRLSSSDAAIQLDLIAKVCGVSSAEDYFSRLPDTLKDKRIYGALLNAY 379
Query: 134 CKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDS 193
+ M +KAE L+EK++ + +PFN +MTLY +K+ ++I EM +I D
Sbjct: 380 VQAKMRDKAEILIEKLRNKGYATTPLPFNVMMTLYMNLKELDKVQSMISEMMNKNIQLDI 439
Query: 194 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 253
Y+YN+W L++ E+V E+MK + + +WTTFS +A++Y++ G FEKAE LK
Sbjct: 440 YSYNIW---LSSCESTERMEQVFEQMKLERTINPNWTTFSTMATMYIKLGQFEKAEECLK 496
Query: 254 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLK 313
++E+R +RD Y +LI+LYG TGN +EVYR W + FPN N+ Y +I LV +
Sbjct: 497 KVESRITNRDRMPYHYLISLYGSTGNKAEVYRAWNIYKSKFPNIPNLGYHALISSLVRVG 556
Query: 314 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 373
DL GAEK ++EW S ++YD R+ N+++G Y KEG LE AE + G PN+ TWE
Sbjct: 557 DLEGAEKIYEEWLSVKSSYDPRIGNLLLGCYVKEGFLEKAEGFLDHMIEAGGKPNSTTWE 616
Query: 374 IFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 433
I ++ + A+ C ++A+ G G W P + F+ E+E D E +
Sbjct: 617 ILAEGNTGVKKISDALSCFKRAV-LAEGSNG-WKPKPVNVSAFLDLCEEEADTATKEALM 674
Query: 434 EILKK 438
+L++
Sbjct: 675 GLLRQ 679
>gi|297814019|ref|XP_002874893.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297320730|gb|EFH51152.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 525
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 150/461 (32%), Positives = 265/461 (57%), Gaps = 12/461 (2%)
Query: 25 LYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENME-K 83
L ++ K S+ V++R+ + + V K+E+ +++LR K Y AL++ E M +
Sbjct: 60 LLSLVYTKRSAVVTIRK----WKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVLQ 115
Query: 84 RGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAE 143
+ D A+HLDL++K++G+++AE +F DLP+ + H SLL+ Y + +++KAE
Sbjct: 116 EDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDLPDQMRGHAACTSLLHSYVQNKLSDKAE 175
Query: 144 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 203
AL EKM E S +P+N +++++ G EK+ +I+E+K + PD TYN+W+ A
Sbjct: 176 ALFEKMGECGFLKSCLPYNHMLSMFISKGQFEKVSVLIKELKMKT-SPDIVTYNLWLTAF 234
Query: 204 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 263
A+ ND+ GAE+V + K + ++ DW T+S L ++Y + EKA+ ALKE+E + ++
Sbjct: 235 ASGNDVEGAEKVYLKAK-ESKLNPDWVTYSVLTNLYAKTDNLEKAKLALKEMEKLVSKKN 293
Query: 264 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 323
AY LI+L+ G+ V W+ +R +F + YL+MI +V L + A+ +
Sbjct: 294 RVAYASLISLHANLGDKDGVNLTWKKVRSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYD 353
Query: 324 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
EWES T D R+ N+++ Y + E+ ER +G +P+ TWEI + YL+
Sbjct: 354 EWESVSGTGDARIPNLILAEYMNRDEILLGEKFYERIVEKGINPSYSTWEILTWAYLKRK 413
Query: 384 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDL 443
D++ +DC EKAID+ + KW + ++ + E++ +V GAE + +L+KA +
Sbjct: 414 DLEKVLDCFEKAIDSVK----KWTVNVRLVKAVCKELEEQGNVKGAEKLMTLLQKA-GHV 468
Query: 444 GVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 484
+++ L+RTYA AG + ++ R+ + VE+ E +K+L+
Sbjct: 469 NTQLYNSLLRTYAKAGEMALIVEERMAKDNVELDEETKELI 509
>gi|108862755|gb|ABA99305.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215704853|dbj|BAG94881.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215712260|dbj|BAG94387.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 514
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 154/458 (33%), Positives = 252/458 (55%), Gaps = 8/458 (1%)
Query: 28 RLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRG-M 86
RL K S L ++ + + V K+++ +++LR + + AL++ E M + M
Sbjct: 48 RLLKLIYPKRSAAVVLRRWAEEGRTVQKYQLNRVVRELRKYRRFKHALEICEWMRTQPEM 107
Query: 87 NKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALL 146
D A+HLDLVAKV+G+ +AE +F D+PE +K T +LL+ Y + +KAEA+L
Sbjct: 108 RLLPGDHAVHLDLVAKVRGLPSAEKFFEDMPERAKGPSTCNALLHAYVQHGRRDKAEAML 167
Query: 147 EKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV 206
E+M + ++PFN +M+LY +G EK+P +I+E++ +I PD TYN+W+ +
Sbjct: 168 EEMAKAGYLTCALPFNHMMSLYMSSGELEKVPEMIKELRRYTI-PDLVTYNIWLTYCSKK 226
Query: 207 NDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSA 266
N + AE+V + MK D RV DW TFS L SIY+ AGL K AL E+E R + ++ +A
Sbjct: 227 NSVKAAEKVYDLMK-DERVVPDWMTFSLLGSIYINAGLHVKGRDALVEMEKRASRKERAA 285
Query: 267 YQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE 326
Y L+TLY + + R+WR +R F ++ Y M+ L D+ AE + EWE
Sbjct: 286 YSSLLTLYASLSDRGNLDRVWRKMRETFRKFSDTEYKCMLTSLTRFGDIAEAESFYSEWE 345
Query: 327 SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 386
S T D R+ N ++ Y K G +E AE + ++G P+ TWE+F YL +G M
Sbjct: 346 SASGTRDSRIPNTILAFYIKNGMMEKAEGFLDHIVQKGVKPSYSTWELFVWGYLSDGRMD 405
Query: 387 LAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVE 446
++CL+KA+ KW P+ + E++ D++ AE L + ++A + E
Sbjct: 406 KVLECLKKALSCLE----KWDPNPQLATAIYSQIEEKGDIEAAEKLLVMFREA-GYVTTE 460
Query: 447 VFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 484
++ ++RTYA A ++ R+ +KV + + ++ LL
Sbjct: 461 IYNSVLRTYAKAELMPLIVDERMDQDKVSMDDETRSLL 498
>gi|242096944|ref|XP_002438962.1| hypothetical protein SORBIDRAFT_10g029030 [Sorghum bicolor]
gi|241917185|gb|EER90329.1| hypothetical protein SORBIDRAFT_10g029030 [Sorghum bicolor]
Length = 503
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 141/394 (35%), Positives = 226/394 (57%), Gaps = 2/394 (0%)
Query: 48 KSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVS-DQAIHLDLVAKVQGI 106
+S KR+ E+ +K LR R + AL++SE M +G K + D A+HLDL+ + G+
Sbjct: 76 RSGKRLRPCELHFVVKDLRRRHRHRQALEVSEWMNLKGHVKFLPKDHAVHLDLIGHIHGV 135
Query: 107 DAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMT 166
AAE YF +L + K YG+LL CY +E + +KA A +KMKEL F+ +P+++LM
Sbjct: 136 GAAETYFNNLSDKDKTEKPYGALLYCYTRECLVDKALAHFQKMKELGFVFTPLPYSNLMI 195
Query: 167 LYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA 226
LYA E++P+++ EMK++ I+P++++YN+ + A D SG E +EEM+ +V
Sbjct: 196 LYANVEQHERVPSVMAEMKSNGIVPNNFSYNICINAYGTRADFSGLENTLEEMEFASQVV 255
Query: 227 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
DW T++++AS Y++ L EKA AL++ E + +D AY LI+LYG G+ SE+ R+
Sbjct: 256 VDWRTYADVASHYIKGDLREKAYSALQKAEAKMDEKDSFAYSHLISLYGHLGDKSEIKRL 315
Query: 287 WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAK 346
W L N Y M+ VLV L ++ AE K+WES +D +V N+++ Y +
Sbjct: 316 WVLQMLKCKGCINKGYKYMLTVLVKLDEIAEAEDLLKKWESSKNEFDFKVPNILLKGYCQ 375
Query: 347 EGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKW 406
G L+ AE L + R+G P+A +W I + Y GD+ A + ++A+ D G W
Sbjct: 376 WGLLDKAEALLDGFLRKGKKPSATSWAIVASAYAEKGDVPRAYELTKRALSMCVPDSG-W 434
Query: 407 VPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 440
+P I +++ E +V E F+++LK V
Sbjct: 435 IPEPSMIEVILKYLGDEGEVKDVEAFIDLLKVVV 468
>gi|15235508|ref|NP_192191.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213327|sp|Q9SY07.1|PP302_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g02820, mitochondrial; Flags: Precursor
gi|4263527|gb|AAD15353.1| hypothetical protein [Arabidopsis thaliana]
gi|7269767|emb|CAB77767.1| hypothetical protein [Arabidopsis thaliana]
gi|332656833|gb|AEE82233.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 532
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 150/461 (32%), Positives = 264/461 (57%), Gaps = 12/461 (2%)
Query: 25 LYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENME-K 83
L ++ K S+ V++R+ + + V K+E+ +++LR K Y AL++ E M +
Sbjct: 67 LLSLVYTKRSAVVTIRK----WKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQ 122
Query: 84 RGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAE 143
+ D A+HLDL++K++G+++AE +F D+P+ + H SLL+ Y + +++KAE
Sbjct: 123 EDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAE 182
Query: 144 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 203
AL EKM E S +P+N ++++Y G EK+P +I+E+K + PD TYN+W+ A
Sbjct: 183 ALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIRT-SPDIVTYNLWLTAF 241
Query: 204 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 263
A+ ND+ GAE+V + K + ++ DW T+S L ++Y + EKA ALKE+E + ++
Sbjct: 242 ASGNDVEGAEKVYLKAKEE-KLNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVSKKN 300
Query: 264 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 323
AY LI+L+ G+ V W+ ++ +F + YL+MI +V L + A+ +
Sbjct: 301 RVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYD 360
Query: 324 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
EWES T D R+ N+++ Y + E+ ER +G +P+ TWEI + YL+
Sbjct: 361 EWESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRK 420
Query: 384 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDL 443
DM+ +DC KAID+ + KW + ++ + E++ +V GAE + +L+KA +
Sbjct: 421 DMEKVLDCFGKAIDSVK----KWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKA-GYV 475
Query: 444 GVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 484
+++ L+RTYA AG + ++ R+ + VE+ E +K+L+
Sbjct: 476 NTQLYNSLLRTYAKAGEMALIVEERMAKDNVELDEETKELI 516
>gi|224114960|ref|XP_002316903.1| predicted protein [Populus trichocarpa]
gi|222859968|gb|EEE97515.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 267 bits (682), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 147/437 (33%), Positives = 246/437 (56%), Gaps = 4/437 (0%)
Query: 25 LYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENME-K 83
LY R+ G +S+ L+Q+++ K+V +E+ +K LR+RK + AL++S+ M
Sbjct: 2 LYSRISPLGDPRISLAPVLDQWVEEGKKVKDYELRTIVKGLRERKRFKQALEVSQWMSSN 61
Query: 84 RGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAE 143
R N + SD A+ LDL+ KV G+++AE+YF +L E K H TYG+LLNCY + + EK+
Sbjct: 62 RLCNFSPSDDAVRLDLIGKVHGLESAESYFKNLDEKDKIHKTYGALLNCYVRGGLVEKSL 121
Query: 144 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 203
+ ++KMKEL +++ +N LM LY TG EK+P ++ +MK + I PD ++Y + +++
Sbjct: 122 SHVQKMKELGFFSTALNYNDLMCLYVNTGLLEKVPDVLSDMKENGISPDLFSYRICLKSY 181
Query: 204 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 263
+D E+++ EM+ ++ DW TF+ +A+IY+EAGL EKA LK+ E + +++
Sbjct: 182 GERSDFDNVEKILREMESQSHISMDWRTFATVANIYLEAGLKEKALVYLKKCEEK-VNKN 240
Query: 264 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 323
Y LI+LY GN E+ R+W + N Y+ ++ LV L L AEK +
Sbjct: 241 ALGYNHLISLYASLGNKDEMMRLWELAKANCKKQLNRDYITILGSLVKLGHLEEAEKLLQ 300
Query: 324 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
+WES C YD RV NV++ Y+++G E AE + + + N +W I S Y+
Sbjct: 301 DWESSCQYYDFRVPNVVLIGYSRKGLPEKAEAMLQDIIEKQKMKNPSSWSIISAGYMDKQ 360
Query: 384 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDL 443
+M+ A +C+++A+ + G W P I + +D E F+ +L+ V
Sbjct: 361 NMEKAFECMKEALAAETENNG-WRPKPAMISNILNWLGDNRDAQEVEAFVGLLETKVPK- 418
Query: 444 GVEVFEPLIRTYAAAGR 460
E++ LI++Y G+
Sbjct: 419 SREMYHALIKSYIRCGK 435
>gi|356503236|ref|XP_003520417.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Glycine max]
Length = 555
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 141/417 (33%), Positives = 232/417 (55%), Gaps = 3/417 (0%)
Query: 25 LYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKR 84
+Y R+ + V + LNQ+ + + KWE+ +K+LR K + AL++ + M R
Sbjct: 82 VYRRISLNQNPQVGSAEVLNQWENEGRHLTKWELSRVVKELRKYKRFPRALEVYDWMNNR 141
Query: 85 GMNKTVS--DQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKA 142
VS D AI LDL+AKV+G+ +AE +F+ L + K+ TYG+LLN Y EKA
Sbjct: 142 PERFRVSESDAAIQLDLIAKVRGVSSAEAFFLSLEDKLKDKRTYGALLNVYVHSRSKEKA 201
Query: 143 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 202
E+L + M+ ++P N +MTLY K+ + EM +I D YTYN+W+ +
Sbjct: 202 ESLFDTMRSKGYVIHALPINVMMTLYMNLNEYAKVDMLASEMMEKNIQLDIYTYNIWLSS 261
Query: 203 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 262
+ + E+V E+M+RD + +W+TFS LAS+Y+ EKAE+ L+++E R R
Sbjct: 262 CGSQGSVEKMEQVFEQMERDPTIVPNWSTFSTLASMYIRMNQNEKAEKCLRKVEGRIKGR 321
Query: 263 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 322
D + +L++LYG G EVYR+W + + FP N+ Y +I LV L D+ GAEK +
Sbjct: 322 DRIPFHYLLSLYGSVGKKDEVYRVWNTYKSIFPRIPNLGYHAIISSLVKLDDIEGAEKLY 381
Query: 323 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 382
+EW S ++YD R+ N+++G Y K+ + A E+ G PN+ TWEI S+ ++ +
Sbjct: 382 EEWISVKSSYDPRIGNLLMGWYVKKDDTDKALSFFEQISNDGCIPNSNTWEILSEGHIAD 441
Query: 383 GDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 439
+ A+ CL++A G W P + F+ +++ D++ AE + +L+++
Sbjct: 442 KRISEALSCLKEAFMVA-GGSKSWRPKPSYLSAFLELCQEQNDMESAEVLIGLLRQS 497
>gi|17064738|gb|AAL32523.1| Unknown protein [Arabidopsis thaliana]
gi|27311917|gb|AAO00924.1| Unknown protein [Arabidopsis thaliana]
Length = 532
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 149/461 (32%), Positives = 264/461 (57%), Gaps = 12/461 (2%)
Query: 25 LYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENME-K 83
L ++ K S+ V++R+ + + V K+E+ +++LR K Y AL++ E M +
Sbjct: 67 LLSLVYTKRSAVVTIRK----WKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQ 122
Query: 84 RGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAE 143
+ D A+HLDL++K++G+++AE +F D+P+ + H SLL+ Y + +++KAE
Sbjct: 123 EDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAE 182
Query: 144 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 203
AL EKM E S +P+N ++++Y G EK+P +I+E+K + PD TYN+W+ A
Sbjct: 183 ALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIRT-SPDIVTYNLWLTAF 241
Query: 204 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 263
A+ ND+ GAE+V + K + ++ DW T+S L ++Y + EKA AL+E+E + ++
Sbjct: 242 ASGNDVEGAEKVYLKAKEE-KLNPDWVTYSVLTNLYAKTDNVEKARLALREMEKLVSKKN 300
Query: 264 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 323
AY LI+L+ G+ V W+ ++ +F + YL+MI +V L + A+ +
Sbjct: 301 RVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYD 360
Query: 324 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
EWES T D R+ N+++ Y + E+ ER +G +P+ TWEI + YL+
Sbjct: 361 EWESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRK 420
Query: 384 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDL 443
DM+ +DC KAID+ + KW + ++ + E++ +V GAE + +L+KA +
Sbjct: 421 DMEKVLDCFGKAIDSVK----KWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKA-GYV 475
Query: 444 GVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 484
+++ L+RTYA AG + ++ R+ + VE+ E +K+L+
Sbjct: 476 NTQLYNSLLRTYAKAGEMALIVEERMAKDNVELDEETKELI 516
>gi|242096946|ref|XP_002438963.1| hypothetical protein SORBIDRAFT_10g029040 [Sorghum bicolor]
gi|241917186|gb|EER90330.1| hypothetical protein SORBIDRAFT_10g029040 [Sorghum bicolor]
Length = 502
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 138/380 (36%), Positives = 225/380 (59%), Gaps = 2/380 (0%)
Query: 62 LKKLRDRKLYYPALKLSENMEKRGMNKTVS-DQAIHLDLVAKVQGIDAAENYFVDLPETS 120
+K+LR R+ + AL++SE M +G K + D A+HLDL+ + G+ AAE YF +L +
Sbjct: 90 VKELRTRRRHRQALEVSEWMNLKGHVKFLPKDHAVHLDLIGHIHGVGAAETYFNNLSDKD 149
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
K YG+LLNCY +E + +KA A +KMKEL F+++P+N+LM+LY E++P++
Sbjct: 150 KTEKPYGALLNCYTRERLVDKALAHFQKMKELGFVFTALPYNNLMSLYTNIEQHERVPSV 209
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
+ EMK++ I+PD+++Y + + + D G E +EEM+ + ++ DW T++ +AS Y+
Sbjct: 210 MAEMKSNGIVPDNFSYRICINSYGTRADFFGLENTLEEMECEPQIVVDWNTYTVVASQYI 269
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
+ L EKA ALK+ E + +DL+AY+ LI+LYG G+ SEV R+W N
Sbjct: 270 KGDLREKAYSALKKAEAKMGIKDLAAYRHLISLYGHLGDKSEVKRLWAVQMSNCQRHLNT 329
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
Y N++ VLV L ++ AE KEWE+ +D +V NV++ Y ++G L+ AE L +
Sbjct: 330 DYTNILAVLVKLDEIAEAEDLLKEWETSKNEFDFKVPNVLLTWYCQKGLLDKAEALLDGF 389
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 420
+G P + +WEI + Y GD+ A + + A+ + G WVP I +++
Sbjct: 390 LIKGKMPPSTSWEIVASGYTEKGDVARAYELTKNALYMYAPNSG-WVPEPSMIEMILKYL 448
Query: 421 EQEKDVDGAEGFLEILKKAV 440
E++V E F+++LK AV
Sbjct: 449 GDEREVKDVEAFIDLLKVAV 468
>gi|449462348|ref|XP_004148903.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Cucumis sativus]
gi|449491586|ref|XP_004158945.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Cucumis sativus]
Length = 531
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 156/469 (33%), Positives = 266/469 (56%), Gaps = 15/469 (3%)
Query: 25 LYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENME-K 83
L +F K S+ ++R+ + + + V K+E+ +++LR K Y AL++ E M +
Sbjct: 54 LMSLIFPKRSAVTAIRK----WQEEGRTVRKYELNRNVRELRKLKRYKHALEVCEWMTLQ 109
Query: 84 RGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAE 143
+ M D A+HLDL+ K++G++ AE +F DLP+ + SLL+ Y + ++EKAE
Sbjct: 110 KDMRLVPGDYAVHLDLICKIRGLNRAEKFFEDLPDKIREQSVCTSLLHAYVQNNLSEKAE 169
Query: 144 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 203
AL+EKM E S + FN +++L+ EK+PA+I+ +K ++ PD TYN+ +
Sbjct: 170 ALMEKMSECGFLKSPLSFNHMLSLHISNKQLEKVPALIEGLKKNT-KPDVVTYNLLLNVC 228
Query: 204 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 263
ND AE + EMK+ ++ DW +FS LA++Y + L EKA LKE+E +
Sbjct: 229 TLQNDTEAAENIFLEMKKT-KIQPDWVSFSTLANLYCKNQLTEKAAATLKEMEKMAFKSN 287
Query: 264 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 323
+ L++LY G+ +EVYRIW+ L+ +F ++ Y+ MI LV L +L AEK +
Sbjct: 288 RLSLSSLLSLYTNLGDKNEVYRIWKKLKSSFRKMSDREYMCMISSLVKLNELEEAEKLYT 347
Query: 324 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
EWES T D RV+NVM+GAY K+ ++E AE R ++G P+ TWE+ + YL+
Sbjct: 348 EWESVSGTRDTRVSNVMLGAYIKKNQIEQAESFYNRMLQKGTVPSYTTWELLTWGYLKEN 407
Query: 384 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDL 443
M+ + KA++ + KW ++ + E++ +++G E L IL+ A +
Sbjct: 408 QMEKVLHFFRKAVNRVK----KWNADERLVKGVCKKLEEQGNINGVEQLLLILRNA-GHV 462
Query: 444 GVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL---EAICV 489
E++ L+RTYA AG+ ++ R++ + V++++ +++LL +CV
Sbjct: 463 DTEIYNSLLRTYAKAGKMPLIVAERMERDNVQLNDETRELLRLTSKMCV 511
>gi|359485373|ref|XP_003633265.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Vitis vinifera]
Length = 461
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 155/443 (34%), Positives = 253/443 (57%), Gaps = 15/443 (3%)
Query: 24 ALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENM-E 82
+LYDR+ S+ LNQ+++ + V K ++ ++ ++D + ++ AL++S+ M +
Sbjct: 23 SLYDRIQAVRDPKASISPLLNQWIEEGQTVSKPQLQSLVRIMKDFRRFHHALEISQWMTD 82
Query: 83 KRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKA 142
+R T SD AI LDL++ V G AE+YF ++P K YG+LL+ Y +E EKA
Sbjct: 83 RRYFTLTPSDAAIRLDLISMVHGRVQAESYFNNIPNNLKTSSAYGALLSGYVREKSVEKA 142
Query: 143 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 202
EA ++KM+E++ SS P+N L+ LY++TG+ KI A+IQEM++ +I D++T M A
Sbjct: 143 EATMQKMREMDFATSSFPYNMLINLYSQTGNHGKIEALIQEMQSKAIPCDAFTVRNLMVA 202
Query: 203 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 262
A +DIS E+ + M+ D ++ DW +S AS Y++ GL +KA LK++E+ H
Sbjct: 203 YVAASDISAMEKFLNRMEEDPHISVDWNIYSVAASGYLKVGLIDKALEMLKKIESNRPHL 262
Query: 263 D-LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 321
+ LSA++FL++LY +TG+ E+YR+W + ++ +Y MI L L D+ GAEK
Sbjct: 263 ERLSAFKFLLSLYARTGHKQELYRVWNLYKPSYEYPE--AYSCMITCLTKLDDIEGAEKI 320
Query: 322 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 381
F+EWE C YD RV N ++ AY K + AE L + P A TW I + Y+
Sbjct: 321 FQEWECECTMYDFRVLNRLLSAYCKRCLFDKAESLVNKVIEERM-PYASTWNILAKGYVE 379
Query: 382 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVD 441
+ M AV+ L+KAI GR W P+S + + + E + +++ E + K
Sbjct: 380 DKQMPKAVEMLKKAISVGRKG---WRPNSIILDACIEYLEGQGNLEEIEEIARLCK---- 432
Query: 442 DLGV---EVFEPLIRTYAAAGRT 461
+LG+ ++ L+RT AA ++
Sbjct: 433 NLGIPDGDIHHRLLRTSAAGEKS 455
>gi|357440753|ref|XP_003590654.1| WD repeat-containing protein [Medicago truncatula]
gi|355479702|gb|AES60905.1| WD repeat-containing protein [Medicago truncatula]
Length = 562
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 147/443 (33%), Positives = 253/443 (57%), Gaps = 15/443 (3%)
Query: 55 KWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTV-SDQAIHLDLVAKVQGIDAAENYF 113
K+++ +++LR K Y AL++ E M+ + K V D A+ LDL+ KV+G+++AE +F
Sbjct: 69 KYQLNRMIRELRKNKRYKHALEVCEWMKLQNDIKLVEGDYAVQLDLITKVRGLNSAEKFF 128
Query: 114 VDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGH 173
DLP+ + T +LL+ Y + +T KAEAL+ KM E S +P+N +M+LY G
Sbjct: 129 EDLPDKMRGQPTCTALLHAYVQNNLTNKAEALMSKMSECGFLRSPVPYNRMMSLYISNGK 188
Query: 174 PEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFS 233
EK+P + +E+K ++ PD T+N+ + A A+ ND+ AERV+ ++K+ +V DW T+S
Sbjct: 189 LEKVPKLFEELKVNT-SPDVVTFNLLLTACASENDVETAERVLLQLKK-AKVDPDWVTYS 246
Query: 234 NLASIYVEAG----LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS 289
L ++Y+ EKA LKE+E R + AY L++L+ GN+ EV RIW
Sbjct: 247 TLTNLYIRNASVDDCLEKAASTLKEMEKRTSRETRVAYSSLLSLHANMGNVDEVNRIWGK 306
Query: 290 LRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGR 349
++ F ++ Y+ MI LV L D G E +KEWES T D+RV+N+++ +Y +G+
Sbjct: 307 MKACFCKMSDDEYVCMISSLVKLGDFAGVENLYKEWESVSGTNDVRVSNLLLTSYVDQGQ 366
Query: 350 LENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPS 409
+E AE + +G + +WE+ + YL+ D+K + KAI + + +W+P
Sbjct: 367 MEMAEIFCNQLVEKGVCLSYSSWELLTRGYLKKKDVKKFLHYFGKAISSVK----QWIPD 422
Query: 410 SETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRL 469
++ +++ ++GAE L IL+ A + ++ ++TYAAAG+ V+ R+
Sbjct: 423 PRLVQEAFTVIQEQAHIEGAEQLLVILRNA-GHVNTNIYNLFLKTYAAAGKMPLVVAERM 481
Query: 470 KMEKVEVSEASKKLLE---AICV 489
K + V++ + + +LL+ +CV
Sbjct: 482 KKDNVQLDKETHRLLDLTSKMCV 504
>gi|293331503|ref|NP_001168643.1| uncharacterized protein LOC100382430 [Zea mays]
gi|223949857|gb|ACN29012.1| unknown [Zea mays]
gi|413933913|gb|AFW68464.1| hypothetical protein ZEAMMB73_255812 [Zea mays]
Length = 500
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 138/385 (35%), Positives = 223/385 (57%), Gaps = 2/385 (0%)
Query: 57 EVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVS-DQAIHLDLVAKVQGIDAAENYFVD 115
E+ +K+LR R+ + AL++SE M +G K + D AIHLDL+ ++ G++AAE YF +
Sbjct: 81 ELQRIVKELRKRRRHRQALEVSEWMSLKGHVKFLPKDHAIHLDLIGQIHGVEAAETYFNN 140
Query: 116 LPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
L + K YG+LLNCY +EL+ +KA A MKEL FS++P+N LM LY + G E
Sbjct: 141 LSDKDKTEKPYGALLNCYTRELLVDKALAHFRNMKELGFVFSTLPYNDLMGLYTRIGQHE 200
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
++P+++ EMK++ I+PD+++Y + + + D G E +EEM+ + ++ DW T++ +
Sbjct: 201 RVPSVMAEMKSNGIVPDNFSYRICINSYGTRADFFGLENTLEEMECEPQIVVDWNTYAVV 260
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
AS Y++ L EKA AL + E + +D AY+ LI+LYG G+ SE R+W
Sbjct: 261 ASNYIKGDLREKAYSALSKAEAKLDKQDPDAYRHLISLYGNLGDKSEAKRLWAVQMSNCK 320
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEE 355
N Y+NM+ VLV L ++ AE KEWES ++D RV NV++ Y ++ L+ AE
Sbjct: 321 RYINRDYMNMLSVLVKLDEITEAEDLLKEWESSQNSFDFRVPNVLLTGYRQKALLDKAEM 380
Query: 356 LKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRT 415
L + ++G P + +W I + Y GD+ A + + A+ + G W+P +
Sbjct: 381 LLDGFLKKGKTPPSTSWGIVAIGYAEKGDVAKAYEMTKNALSVHAPNTG-WIPRPSMLEM 439
Query: 416 FMRHFEQEKDVDGAEGFLEILKKAV 440
+++ E +V E F+ +LK AV
Sbjct: 440 ILKYLGDEGEVKDVEAFVSLLKAAV 464
>gi|115473169|ref|NP_001060183.1| Os07g0598500 [Oryza sativa Japonica Group]
gi|34393591|dbj|BAC83218.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113611719|dbj|BAF22097.1| Os07g0598500 [Oryza sativa Japonica Group]
gi|215706491|dbj|BAG93347.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 144/395 (36%), Positives = 232/395 (58%), Gaps = 4/395 (1%)
Query: 48 KSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVS-DQAIHLDLVAKVQGI 106
K R+ E+ +K+LR R+ + AL++SE M +G K + D A+HLDL+ ++ G
Sbjct: 89 KPGNRLRHVELERIVKELRKRRRHRQALEVSEWMNAKGHVKFLPKDHAVHLDLIGEIHGS 148
Query: 107 DAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMT 166
AAE YF +LP+ K YG+LLNCY +EL+ EK+ A +KMKEL FS++P+N++M
Sbjct: 149 SAAETYFNNLPDKDKTEKPYGALLNCYTRELLVEKSLAHFQKMKELGFVFSTLPYNNIMG 208
Query: 167 LYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA 226
LY G EK+P++I EMK++ I+PD+++Y + + + D G E +EEM+ + ++
Sbjct: 209 LYTNLGQHEKVPSVIAEMKSNGIVPDNFSYRICINSYGTRADFFGMENTLEEMECEPKIV 268
Query: 227 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
DW T++ +AS Y++ + EKA ALK+ E + +D +Y LI+LYG G+ SEV R+
Sbjct: 269 VDWNTYAVVASNYIKGNIREKAFSALKKAEAKINIKDSDSYNHLISLYGHLGDKSEVNRL 328
Query: 287 WRSLRLAFPN-TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 345
W +L+++ N N Y M+ VLV L ++ AE KEWES +D +V NV++ Y
Sbjct: 329 W-ALQMSNCNRHINKDYTTMLAVLVKLNEIEEAEVLLKEWESSGNAFDFQVPNVLLTGYR 387
Query: 346 KEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGK 405
++ L+ AE L + ++G P + +W I + Y GD A + + A+ + G
Sbjct: 388 QKDLLDKAEALLDDFLKKGKMPPSTSWAIVAAGYAEKGDAAKAYELTKNALCVYAPNTG- 446
Query: 406 WVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 440
W+P I +++ E DV+ E F+++LK AV
Sbjct: 447 WIPRPGMIEMILKYLGDEGDVEEVEIFVDLLKVAV 481
>gi|356555227|ref|XP_003545936.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Glycine max]
Length = 486
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 149/470 (31%), Positives = 261/470 (55%), Gaps = 6/470 (1%)
Query: 16 RSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPAL 75
RSKK +LY ++ G+ + SV L+ ++ ++ E+ ++ LR R + AL
Sbjct: 17 RSKK---PSLYSKISPLGNPNTSVVPVLDDWVFKGNKLRVAELQRIIRDLRKRSRFSQAL 73
Query: 76 KLSENMEKRGMNK-TVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYC 134
++SE M +G+ + ++ A+HLDL+ KV G +AE YF L + K + TYG+LLNCY
Sbjct: 74 QISEWMHNKGVCIFSPTEYAVHLDLIGKVHGFSSAETYFDALKDQHKTNKTYGALLNCYV 133
Query: 135 KELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSY 194
++ T+KA + L+KMK+L S + +N +M LY G EK+P +++EMK + ++PD++
Sbjct: 134 RQRQTDKALSHLQKMKDLGFASSPLTYNDIMCLYTNIGQHEKVPDVLREMKQNQVLPDNF 193
Query: 195 TYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE 254
+Y + + + +D G ERV++EM+ + DW T+S A+ Y++AGL A AL++
Sbjct: 194 SYRICINSYGVRSDFGGVERVLKEMETQPNIVMDWNTYSIAANFYIKAGLTRDAVCALRK 253
Query: 255 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 314
E R ++D Y LI+LY Q G +EV RIW + A N + +++ LV L +
Sbjct: 254 SEERLDNKDGQGYNHLISLYAQLGLKNEVMRIWDLEKNACKRCINRDFTTLLESLVKLGE 313
Query: 315 LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 374
L AEK KEWES YD + +++I Y+++G E A + E + + W I
Sbjct: 314 LDEAEKILKEWESSDNCYDFGIPSIVIIGYSQKGLHEKALAMLEELQNKEKVTTPNCWSI 373
Query: 375 FSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 434
+ Y+ G+M+ A C + A+ + G W P+++ I +R V+ AE +
Sbjct: 374 VAGGYIHKGEMEKAFKCFKTALSLYVENKG-WKPNAKVIAELLRWIGDNGSVEDAEVLVS 432
Query: 435 ILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 484
+L+ AV + +++ LI+TY G+ +L R++ + ++ ++ +KK++
Sbjct: 433 LLRNAV-PVNRQMYHTLIKTYIRGGKEVDDLLGRMEKDGIDENKETKKII 481
>gi|326505170|dbj|BAK02972.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 510
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 154/466 (33%), Positives = 258/466 (55%), Gaps = 9/466 (1%)
Query: 23 EALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENME 82
+ L RL K S L ++ + + V K+++ +++LR + + AL++ E M
Sbjct: 38 DTLGKRLLKLIYPKRSAVVVLRRWAEEGRAVHKYQLNRVVRELRKYRRFKHALEICEWMR 97
Query: 83 KRGMNKTV-SDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEK 141
+ + + D A+HLDLVAKV+G+ +AE +F D+PE +K T SLL+ Y + +K
Sbjct: 98 TQPEIRLLPGDHAVHLDLVAKVRGLASAEKFFEDVPERAKGPSTCNSLLHAYVQHGARDK 157
Query: 142 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 201
AEA+L++M + ++PFN +M+LY G EK+P +I+E++ +I PD TYN+W+
Sbjct: 158 AEAMLKEMADAGYLTCALPFNHMMSLYMSVGELEKVPEMIKELRRYTI-PDLVTYNIWLT 216
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 261
+ N + AE+V + MK D RV DW TFS LASIY+ AGL K AL E+E R +
Sbjct: 217 YCSRKNSVKSAEKVFDLMK-DDRVVPDWMTFSLLASIYINAGLHVKGRDALVEMEKRASR 275
Query: 262 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 321
++ +AY L+T+Y + + R+W +R F ++ Y M+ L D+ AE
Sbjct: 276 KERAAYSSLLTMYASLSDRGNLDRVWSKMRQTFRKFSDAEYKCMLTSLTRFGDIAAAEFV 335
Query: 322 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 381
+ EWES T D R+ N ++ Y K G +E AE + ++G P+ TWE+F YL
Sbjct: 336 YGEWESQSGTKDSRIPNTILSFYIKNGEMEKAESFLQYIVQKGVKPSYSTWELFVWGYLG 395
Query: 382 NGDMKLAV-DCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 440
N + V +CL+KA+ + KW P+ + + E++ D++ AE L +L+ A
Sbjct: 396 NDERTDKVMECLKKALSSLE----KWEPNPQLVAALFSQIEKKGDIEAAEELLVVLRGA- 450
Query: 441 DDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEA 486
+ E++ ++RTYA A ++ R+ +KV + + +++LL++
Sbjct: 451 GYVTTEIYNLVLRTYAKAEMMPLIIDERMDQDKVSMDDETRRLLKS 496
>gi|356522970|ref|XP_003530115.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Glycine max]
Length = 546
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 140/417 (33%), Positives = 232/417 (55%), Gaps = 3/417 (0%)
Query: 25 LYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKR 84
+Y R+ + V + LNQ+ + + KWE+ +K+LR K + AL++ + M R
Sbjct: 83 VYRRISLNPNPQVGSAEVLNQWENEGRHLTKWELSRVVKELRKYKRFRRALEVYDWMNNR 142
Query: 85 GMNKTVS--DQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKA 142
VS D AI LDL+AKV+G+ +AE +F+ L + K+ TYG+LLN Y EKA
Sbjct: 143 PERFRVSESDAAIQLDLIAKVRGLSSAEAFFLSLEDKLKDKKTYGALLNVYVHSRSKEKA 202
Query: 143 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 202
E+L + M+ ++PFN +MTLY K+ + EM +I D YTYN+W+ +
Sbjct: 203 ESLFDTMRSKGYVIHALPFNVMMTLYMNLNEYAKVDILASEMMEKNIQLDIYTYNIWLSS 262
Query: 203 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 262
+ + E+V E+M++D + +W+TFS +AS+Y+ EKAE L+++E R R
Sbjct: 263 CGSQGSVEKMEQVFEQMEKDPSIIPNWSTFSTMASMYIRMDQNEKAEECLRKVEGRIKGR 322
Query: 263 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 322
D + +L++LYG G EV R+W + + FP+ N+ Y +I LV L D+ AEK +
Sbjct: 323 DRIPFHYLLSLYGSVGKKDEVCRVWNTYKSIFPSIPNLGYHAIISSLVKLDDIEVAEKLY 382
Query: 323 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 382
+EW S ++YD R+ N++IG Y K+G + A E+ G PN+ TWEI S+ ++ +
Sbjct: 383 EEWISVKSSYDPRIGNLLIGWYVKKGDTDKALSFFEQMLNDGCIPNSNTWEILSEGHIAD 442
Query: 383 GDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 439
+ A+ CL++A G W P + F+ +++ D++ AE + +L+++
Sbjct: 443 KRISEAMSCLKEAF-MAAGGSKSWRPKPSYLSAFLELCQEQDDMESAEVLIGLLRQS 498
>gi|326533934|dbj|BAJ93740.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 160/444 (36%), Positives = 252/444 (56%), Gaps = 21/444 (4%)
Query: 25 LYDRLFK--KGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENME 82
LY RL K + V +L+++L +K + ++ ++KLR+ + + AL+L + ME
Sbjct: 38 LYKRLSKLPPAAPLGCVAAELDRWLCERKPLCGHQLLFYVRKLRNFRQHRRALELMDWME 97
Query: 83 KRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKA 142
RG N D A+ LDL+ V G++AAE YF+ LP+ K+ TY SLL+CY E EKA
Sbjct: 98 ARGANLLPGDHALRLDLICTVNGLEAAEEYFLSLPDMYKSVKTYSSLLHCYA-EHKAEKA 156
Query: 143 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 202
L EKM+ +N+ +++ + +LM+LY KTG PEKI +EM+A+ + D++TY + +
Sbjct: 157 LELYEKMRTMNIVPNTLVYKNLMSLYLKTGQPEKILQTFEEMRANGVRTDNFTYYMLTES 216
Query: 203 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 262
+N + E+ +E++++ + W+ ++ LA Y + G F+KA LK+ E
Sbjct: 217 HIMLNGLESTEKFLEDLEKS--IPVHWSLYTRLADSYNKVGQFDKAGLTLKKAEEVMDRG 274
Query: 263 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 322
++ A+ L++LY +GNLSEV R+W SLR ++N SYL M+ L L D ++ F
Sbjct: 275 EMFAWHNLLSLYASSGNLSEVKRVWSSLRSELKISSNRSYLVMLSALKKLDDFDCMQQVF 334
Query: 323 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 382
+EWE +YD+R+ NVMI AY + + AE L++ A +G N T+ IF++ YL
Sbjct: 335 QEWELTQESYDMRIPNVMIKAYLAKDMTDEAEALRQTAMAQGHS-NPLTFYIFTESYLEK 393
Query: 383 GDMKLAVDCLEKAIDTGRGDGGK------WVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 436
E A++ R D GK W P E ++ F++HFE+ KDVDG E F L
Sbjct: 394 SRT-------EAALEVWR-DAGKMVKTPNWAPPPELVKRFLKHFEEAKDVDGMESFCACL 445
Query: 437 KKAVDDLGVEVFEPLIRTYAAAGR 460
+K ++ L + + L RTY AAGR
Sbjct: 446 EK-LECLDTDARDALSRTYVAAGR 468
>gi|326530906|dbj|BAK01251.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 511
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 149/431 (34%), Positives = 236/431 (54%), Gaps = 4/431 (0%)
Query: 12 NIAKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFL-KSKKRVFKWEVGDTLKKLRDRKL 70
N A+R + L L+ G D + ++ ++ K R+ E+ +K+LR R+
Sbjct: 47 NSAERPPRR-PPGLQSTLWPLGHPDTLLVPEIERWADKPGNRLRPVELERIVKELRKRRR 105
Query: 71 YYPALKLSENMEKRGMNKTVS-DQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSL 129
+ AL++SE M +G + + D A+HLDL+ +V GI AAE YF LP+ K YG+L
Sbjct: 106 HRQALEVSEWMSAKGHVRFLPKDYAVHLDLIGQVHGIGAAEAYFNTLPDKDKTEKPYGAL 165
Query: 130 LNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
LNCY +ELM + + A +KMKEL FSS+P+N+LM LY G EK+P++I EMK S I
Sbjct: 166 LNCYTRELMVDGSLAHFQKMKELGFVFSSLPYNNLMGLYTNIGQHEKVPSVIAEMKGSGI 225
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
MPD+++Y + + + D G E +E+M+ + ++ DW T++ +AS Y++ L EKA
Sbjct: 226 MPDNFSYRICINSYGTRADFFGMENTLEDMECEPQIVVDWNTYAVVASNYIKGNLREKAI 285
Query: 250 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 309
ALK+ E + +D Y LI+LYGQ G+ SE+ R+W N Y M+ +L
Sbjct: 286 SALKKAEAKIDIKDSDTYNHLISLYGQLGDKSEMRRLWGLQMSNCKRHINKDYTTMLAML 345
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
V L ++ AE KEWES +D V NV++ Y + L+ AE L + ++G P +
Sbjct: 346 VRLDEIEEAEALLKEWESSENAFDFHVPNVLLTGYRHKDMLDKAEALLDDFLKKGKMPPS 405
Query: 370 KTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 429
+W I + Y GD A + ++ A+ G W+P I +++ E D+
Sbjct: 406 TSWAIVAIGYAEKGDCAKAYELIKNALCVYVPRSG-WIPRPAMIEMILKYLGDEGDLKDV 464
Query: 430 EGFLEILKKAV 440
E F+++L+ A+
Sbjct: 465 ETFVQLLQAAM 475
>gi|125536853|gb|EAY83341.1| hypothetical protein OsI_38557 [Oryza sativa Indica Group]
Length = 444
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 140/393 (35%), Positives = 223/393 (56%), Gaps = 7/393 (1%)
Query: 92 DQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKE 151
D A+HLDLVAKV+G+ +AE +F D+PE +K T +LL+ Y + +KAEA+LE+M +
Sbjct: 43 DHAVHLDLVAKVRGLPSAEKFFEDMPERAKGPSTCNALLHAYVQHGRRDKAEAMLEEMAK 102
Query: 152 LNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISG 211
++PFN +M+LY +G EK+P +I+E++ +I PD TYN+W+ + N +
Sbjct: 103 AGYLTCALPFNHMMSLYMSSGELEKVPEMIKELRRYTI-PDLVTYNIWLTYCSKKNSVKA 161
Query: 212 AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 271
AE+V + MK D RV DW TFS L SIY+ AGL K AL E+E R + ++ +AY L+
Sbjct: 162 AEKVYDLMK-DERVVPDWMTFSLLGSIYINAGLHVKGRDALVEMEKRASRKERAAYSSLL 220
Query: 272 TLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCAT 331
TLY + + R+WR +R F ++ Y M+ L D+ AE + EWES T
Sbjct: 221 TLYASLSDRGNLDRVWRKMRETFRKFSDTEYKCMLTSLTRFGDIAEAESFYSEWESASGT 280
Query: 332 YDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDC 391
D R+ N ++ Y K G +E AE + ++G P+ TWE+F YL +G M ++C
Sbjct: 281 RDSRIPNTILAFYIKNGMMEKAEGFLDHIVQKGVKPSYSTWELFVWGYLSDGRMDKVLEC 340
Query: 392 LEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPL 451
L+KA+ KW P+ + E++ D++ AE L + ++A + E++ +
Sbjct: 341 LKKALSCLE----KWDPNPQLATAIYSQIEEKGDIEAAEKLLVMFREA-GYVTTEIYNSV 395
Query: 452 IRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 484
+RTYA A ++ R+ +KV + + ++ LL
Sbjct: 396 LRTYAKAELMPLIVDERMDQDKVSMDDETRSLL 428
>gi|302143278|emb|CBI21839.3| unnamed protein product [Vitis vinifera]
Length = 501
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 150/424 (35%), Positives = 243/424 (57%), Gaps = 12/424 (2%)
Query: 24 ALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENM-E 82
+LYDR+ S+ LNQ+++ + V K ++ ++ ++D + ++ AL++S+ M +
Sbjct: 23 SLYDRIQAVRDPKASISPLLNQWIEEGQTVSKPQLQSLVRIMKDFRRFHHALEISQWMTD 82
Query: 83 KRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKA 142
+R T SD AI LDL++ V G AE+YF ++P K YG+LL+ Y +E EKA
Sbjct: 83 RRYFTLTPSDAAIRLDLISMVHGRVQAESYFNNIPNNLKTSSAYGALLSGYVREKSVEKA 142
Query: 143 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 202
EA ++KM+E++ SS P+N L+ LY++TG+ KI A+IQEM++ +I D++T M A
Sbjct: 143 EATMQKMREMDFATSSFPYNMLINLYSQTGNHGKIEALIQEMQSKAIPCDAFTVRNLMVA 202
Query: 203 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 262
A +DIS E+ + M+ D ++ DW +S AS Y++ GL +KA LK++E+ H
Sbjct: 203 YVAASDISAMEKFLNRMEEDPHISVDWNIYSVAASGYLKVGLIDKALEMLKKIESNRPHL 262
Query: 263 D-LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 321
+ LSA++FL++LY +TG+ E+YR+W + ++ +Y MI L L D+ GAEK
Sbjct: 263 ERLSAFKFLLSLYARTGHKQELYRVWNLYKPSYEYPE--AYSCMITCLTKLDDIEGAEKI 320
Query: 322 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 381
F+EWE C YD RV N ++ AY K + AE L + P A TW I + Y+
Sbjct: 321 FQEWECECTMYDFRVLNRLLSAYCKRCLFDKAESLVNKVIEERM-PYASTWNILAKGYVE 379
Query: 382 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVD 441
+ M AV+ L+KAI GR W P+S + + + E + +++ E + K
Sbjct: 380 DKQMPKAVEMLKKAISVGRKG---WRPNSIILDACIEYLEGQGNLEEIEEIARLCK---- 432
Query: 442 DLGV 445
+LG+
Sbjct: 433 NLGI 436
>gi|357151797|ref|XP_003575907.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Brachypodium distachyon]
Length = 501
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/465 (32%), Positives = 257/465 (55%), Gaps = 9/465 (1%)
Query: 23 EALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENME 82
+ L RL K S L ++ + + V K+++ +++LR + + AL++ E M
Sbjct: 30 DTLGKRLLKLMYPKRSAVVVLRRWTEEGRTVQKYQLNRVVRELRKYRRFKHALEICEWMR 89
Query: 83 KRG-MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEK 141
+ M D A+HLDLVAKV+G+ +AE +F D+PE +K T +LL+ Y + + +K
Sbjct: 90 TQPEMKLLPGDHAVHLDLVAKVRGLASAEKFFEDVPERAKGPSTCNALLHAYVQNGVRDK 149
Query: 142 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 201
AEA+L +M + ++PFN +M++Y +G EK+P +I+E++ +I PD TYN+W+
Sbjct: 150 AEAMLREMADAGYLTCALPFNHMMSMYMSSGELEKVPEMIKELRRYTI-PDLVTYNIWLT 208
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 261
+ N + AE+V + MK D +V DW TFS +ASIY+ AGL K AL E+E R +
Sbjct: 209 YCSRKNSVKTAEKVFDLMK-DDKVFPDWMTFSLMASIYINAGLHVKGRDALVEMEKRASR 267
Query: 262 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 321
++ +AY L+TLY + + R+W +R F ++ Y M+ L D+ AE
Sbjct: 268 KERTAYSSLLTLYASLSDRGNLDRVWSKMREIFRKFSDTEYKCMLTSLTRFGDITAAESV 327
Query: 322 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 381
+ EWES T D R+ N ++ + K G++E AE + ++G P+ TWE+F YL
Sbjct: 328 YSEWESESGTRDSRIPNTILSFHIKNGKMEMAESFLQHIMQKGVKPSYSTWELFVWGYLG 387
Query: 382 NGD-MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 440
N + + ++CL+KA+ + KW P+ + + E+ D++ AE L +L+ A
Sbjct: 388 NDERIDKILECLKKALSS----LDKWEPNPQLVAALFSLIEKRGDIEAAEELLVVLRGA- 442
Query: 441 DDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLE 485
+ E++ ++RTY+ A ++ R+ +KV + E ++ LL+
Sbjct: 443 GYVTTEIYNSVLRTYSKAEMMPLIIDERMDQDKVSMDEETRGLLK 487
>gi|255559466|ref|XP_002520753.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540138|gb|EEF41715.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 551
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 151/476 (31%), Positives = 275/476 (57%), Gaps = 16/476 (3%)
Query: 14 AKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYP 73
+R L ++ ++ K S+ +++R+ + +V K+++ +++LR K Y
Sbjct: 31 VRRGGDTLGRRIFSLVYSKRSAVIAIRKWKTE----GHKVQKYQLNRIVRELRKMKRYKH 86
Query: 74 ALKLSENM-EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNC 132
AL++ E M ++R + D A+HLDLVAKV+G+ +AE +F DLP+ + T +LL+
Sbjct: 87 ALEVCEWMTQERELKLLPGDYAVHLDLVAKVRGLTSAEKFFEDLPDEMRGWQTCTALLHT 146
Query: 133 Y--CKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
Y CK+++ KAEAL+EKM++ + + +P+N +++LY G +K I++E+K S+
Sbjct: 147 YVKCKDVV--KAEALMEKMRDCSFVKNPLPYNHMISLYIADGEFDKAKRIVEELKKSTT- 203
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
PD T+N+W+ A++ND+ A++V+ E+K+ ++ ADW T+S L ++Y++ L E A
Sbjct: 204 PDVVTFNLWLSMCASLNDVESAKKVLLELKKL-KIEADWITYSTLTNLYLKNKLLEDAVS 262
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
LKE+E R + ++ AY L++LY G+ V+RIW ++ F + Y M+ L+
Sbjct: 263 TLKEMEKRASRKNRLAYSSLLSLYTNMGDKDAVHRIWNKMKSLFCKMNDAEYTCMLSSLI 322
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
L+++ AE + EWES T D +V N+++ AY ++E++E R +G P
Sbjct: 323 KLEEIEKAENLYTEWESVSGTGDPQVANILLAAYINRNQIEDSENFYRRMVEKGVCPCYT 382
Query: 371 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 430
TWE+ + +L+ M+ +DC +KAI + W P +R + E++ + +GAE
Sbjct: 383 TWELLTWGHLKTKQMEKVLDCFKKAITIVK----TWSPDKRLVREVFKILEEKGNAEGAE 438
Query: 431 GFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEA 486
FL +L+ A + E++ L+RTYA AG+ ++ R+K + VE+ E + +L++
Sbjct: 439 EFLVMLRNA-GYVSTEIYNSLLRTYAKAGKMPLIVTERMKKDGVELDEETHRLIKT 493
>gi|255556039|ref|XP_002519054.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541717|gb|EEF43265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 485
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 152/472 (32%), Positives = 258/472 (54%), Gaps = 6/472 (1%)
Query: 14 AKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYP 73
A R+KK LY ++ G + S+ +L+ +++ +V E+ ++ LR R +
Sbjct: 8 ANRTKK---VTLYSKISPLGDPNTSLVPELDNWVQDGNKVRVGELQRIIRDLRKRNRFTQ 64
Query: 74 ALKLSENMEKRGMNK-TVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNC 132
AL++SE M K+G+ + ++ A+ LDL+ KV+G +AENYF +L + K TYG+LLNC
Sbjct: 65 ALEVSEWMNKKGICIFSSTEHAVQLDLIGKVRGFLSAENYFNNLMDHDKTDKTYGALLNC 124
Query: 133 YCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPD 192
Y ++ T+++ + +KMKE+ L S + +N +M LY G EK+ ++ EMK + I PD
Sbjct: 125 YVRQRQTDRSISHWQKMKEMGLASSPLAYNDIMCLYINLGLYEKVLHVLTEMKENKISPD 184
Query: 193 SYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERAL 252
+++Y + + + A +DI G E+V+ EM+ A DW T++ +A+ Y++AGL +KA AL
Sbjct: 185 NFSYRICINSYGARSDIQGMEKVLNEMECRLGNAMDWNTYAVVANFYIKAGLADKAVDAL 244
Query: 253 KELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNL 312
++ E + +D Y LI+LY G SEV RIW + N ++ M++ LV L
Sbjct: 245 RKSEEKLDKKDGIGYNHLISLYATLGIKSEVLRIWDLQKSVCKRRINRDFVTMLESLVKL 304
Query: 313 KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
DL AEK KEWES YD+R+ N+++ Y+K G E AE E +G +W
Sbjct: 305 GDLEEAEKVLKEWESSGNFYDVRIPNIVVVGYSKNGLHEKAEASLEALMEKGRATTPNSW 364
Query: 373 EIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGF 432
+ + YL G+ A +C++ A G W P+ + + E + E F
Sbjct: 365 AMIASGYLEKGEKAKAFECMKAAFSLNVEKKG-WKPNPRVVMDILIWLGDEGSPEDVEAF 423
Query: 433 LEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 484
+ L A+ L +++ L++ +GR + +L R+K +K++ E +K++L
Sbjct: 424 VASLSVAI-PLNRQIYHALLKAKIRSGRDAHEILDRMKTDKIDEDEETKEIL 474
>gi|242034057|ref|XP_002464423.1| hypothetical protein SORBIDRAFT_01g017970 [Sorghum bicolor]
gi|241918277|gb|EER91421.1| hypothetical protein SORBIDRAFT_01g017970 [Sorghum bicolor]
Length = 496
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 140/394 (35%), Positives = 222/394 (56%), Gaps = 2/394 (0%)
Query: 48 KSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVS-DQAIHLDLVAKVQGI 106
+ + R+ E+ +++LR R + AL++SE M +G K + D AIHLDL+ +V G+
Sbjct: 70 RPRNRLRAVELQRIVRELRKRHRHRQALEVSEWMNLKGHVKFLPKDHAIHLDLIGQVHGV 129
Query: 107 DAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMT 166
AAE YF +L + K YG+LLNCY +EL+ +KA A + MKEL FS++ +N+LM
Sbjct: 130 GAAETYFNNLSDKDKTEKPYGALLNCYTRELLVDKALAHFQNMKELGFVFSALSYNNLMG 189
Query: 167 LYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA 226
LY G E++P ++ EMK I+PD+++Y + + + D G E +EEM+ + ++
Sbjct: 190 LYTNIGQHERVPMVMAEMKRDGIVPDNFSYRICINSYGIRADFFGLENTLEEMECEPQIV 249
Query: 227 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
DW T++ +AS Y++ L EKA AL++ E + +D AY LI+LYG G+ EV R+
Sbjct: 250 VDWNTYAVVASNYIKGYLREKAYSALRKAEAKMDKKDGDAYGHLISLYGHLGDKLEVKRL 309
Query: 287 WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAK 346
W L N Y NM+ VLV L ++ AE KEWES +D +V NV++ Y +
Sbjct: 310 WALHMLNCKRYINKDYTNMLAVLVKLDEITEAEDLLKEWESSKNAFDFQVPNVLLTGYRQ 369
Query: 347 EGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKW 406
+G L+ AE L + ++G P + +W I + Y GD+ A + + A+ + G W
Sbjct: 370 KGLLDKAETLLDGFLKKGKTPTSTSWWIVAIGYAEKGDVAKAYELTKNALSVFAPNSG-W 428
Query: 407 VPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 440
+P I +++ E +V E F+ +LK AV
Sbjct: 429 IPRPSIIEMILKYLGNEGEVKDVEAFVNLLKVAV 462
>gi|357146877|ref|XP_003574143.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Brachypodium distachyon]
Length = 511
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 138/394 (35%), Positives = 225/394 (57%), Gaps = 2/394 (0%)
Query: 48 KSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVS-DQAIHLDLVAKVQGI 106
K R+ E+ +K+LR R+ + AL++SE M +G+ K + D A+HLDL+ +V G+
Sbjct: 83 KPGNRLRPVELERIVKELRKRRRHRQALEVSEWMSAKGLVKFLPKDHAVHLDLIGQVHGV 142
Query: 107 DAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMT 166
AAE YF L + K YG+LLNCY +EL+ +K+ A +KMKEL FSS+P+N+LM
Sbjct: 143 GAAEAYFNKLADKDKTEKPYGALLNCYTRELLVDKSLAHFQKMKELGFVFSSLPYNNLMG 202
Query: 167 LYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA 226
LY G EK+P++I EMK++ I+PD+++Y + + + A D G E +EEM+ + ++
Sbjct: 203 LYTNLGQHEKVPSVIAEMKSNGIVPDNFSYRICINSYGARADFFGMENTLEEMECEPQIV 262
Query: 227 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
DW T++ LA+ Y++ L +KA AL++ E + +D Y L++LYGQ G+ SEV R+
Sbjct: 263 VDWNTYAVLANNYIKGNLRDKAISALQKAEAKIDIKDSDTYNHLMSLYGQLGDKSEVKRL 322
Query: 287 WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAK 346
W N Y M+ +L+ L ++ AE KEWES +D V NV++ Y +
Sbjct: 323 WALQMSNCKRHINKDYTTMLAMLLKLDEIEEAEALLKEWESSENAFDFHVPNVLLTGYRQ 382
Query: 347 EGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKW 406
+ L+ AE L + ++G P + +W I + Y GD+ A + + A+ + G W
Sbjct: 383 KDLLDKAEALLDDFLKKGKMPTSTSWAIVAIGYAEKGDVAKAYELTKNALCVYAPNSG-W 441
Query: 407 VPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 440
+P I +++ E ++ E F+ +L+ AV
Sbjct: 442 IPRPAMIEMILKYLGDECNLKDVETFVHLLQAAV 475
>gi|224077120|ref|XP_002305141.1| predicted protein [Populus trichocarpa]
gi|222848105|gb|EEE85652.1| predicted protein [Populus trichocarpa]
Length = 492
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 146/462 (31%), Positives = 253/462 (54%), Gaps = 4/462 (0%)
Query: 24 ALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEK 83
LY ++ GS+ S+ +L+ +++S +V E+ + LR RK + AL++SE M K
Sbjct: 31 TLYSKISPLGSTP-SLEPELDSWVRSGNKVRVAELQRIIHDLRKRKRFSHALQVSEWMHK 89
Query: 84 RGMNK-TVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKA 142
+ + + S+ A+ LDL+ +V G +AENYF +L + KN TYG+LLNCY ++ T+K+
Sbjct: 90 KDICIFSPSEHAVQLDLIGRVHGFVSAENYFNNLRDQDKNEKTYGALLNCYVRQRETDKS 149
Query: 143 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 202
L+KMKE+ SS+ +N +M LY G EK+P ++ EMK ++++PD+++Y + + +
Sbjct: 150 ILHLQKMKEMGFAKSSLTYNDIMCLYTNVGQHEKVPQVLNEMKENNVLPDNFSYRLCINS 209
Query: 203 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 262
A +D+ G E+++ EM+ + DW T++ A+ Y+ L +KA LK+ E R +
Sbjct: 210 FGARDDLEGMEKILNEMEHQPDIVMDWNTYAVAANFYIIGDLTDKAIDTLKKSEARLDKK 269
Query: 263 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 322
D + Y LI+LY + GN +EV R+W + A N Y+ M++ L+ L + AEK
Sbjct: 270 DGTGYNHLISLYAKLGNKTEVLRLWDLEKSACERHINKDYIIMMESLLKLSEFEEAEKML 329
Query: 323 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 382
KEWES YD+RV N +I Y+++G E A+ L E +G +W I + +
Sbjct: 330 KEWESSGNFYDVRVPNTLIIGYSRKGLCEKAKALLENLTEKGKMTLPNSWGIVAAGFFDK 389
Query: 383 GDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDD 442
++ A C++ A+ + G W P+ I + E + AE F+ LK +
Sbjct: 390 SEVAKAFSCMKAALCLYVENKG-WKPNQRVINGILSWLGDEGSAEDAEAFVSSLKTVI-P 447
Query: 443 LGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 484
+ E++ +++ AG+ +L +K ++ E +KK+L
Sbjct: 448 VNREMYHAVLKANIRAGKEVHRLLDGMKTYNIKEDEETKKIL 489
>gi|224125490|ref|XP_002329818.1| predicted protein [Populus trichocarpa]
gi|222870880|gb|EEF08011.1| predicted protein [Populus trichocarpa]
Length = 494
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 145/462 (31%), Positives = 251/462 (54%), Gaps = 4/462 (0%)
Query: 24 ALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEK 83
LY +L GS+ S+ +L+ ++++ K+V E+ + R RK + AL++SE M K
Sbjct: 31 TLYSKLSPLGSTP-SLEPELDSWIQNGKKVKVAELQRIIHDFRMRKRFTHALQVSEWMNK 89
Query: 84 RGMNK-TVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKA 142
+G+ + S A+ LDL+ +V G +AENYF +L + KN TYG+LLNCY ++ T+K+
Sbjct: 90 KGICIFSPSQHAVQLDLIGRVHGFVSAENYFNNLRDQDKNEKTYGALLNCYVQKRETDKS 149
Query: 143 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 202
+ L+KMKE+ SS+ +N +M LY G EK+P ++ EMK +++ PD+++Y + M +
Sbjct: 150 ISHLQKMKEMGFAKSSLSYNDIMCLYTNVGQHEKVPQVLNEMKENNVSPDNFSYRLCMNS 209
Query: 203 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 262
A D+ G E+++ EM+ + DW +++ AS Y++ GL +KA +LK+ E R +
Sbjct: 210 YGARGDLEGMEKMLNEMEHQPDIVVDWNSYAVAASSYIKGGLTDKAIDSLKKSETRLDKK 269
Query: 263 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 322
D + Y LI+LY G +EV R+W + N Y+N++ LV L + EK
Sbjct: 270 DGTGYNHLISLYATLGEKTEVLRLWDLEKSTCERPINKDYINIMASLVKLDEFEEVEKVL 329
Query: 323 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 382
KEWE+ YD+RV N +I Y+ +G E A+ L E +G W + +
Sbjct: 330 KEWEASGNFYDVRVPNTLIIGYSGKGLYEKAKALLENLTEKGKATLPNIWGKVAAGFFDK 389
Query: 383 GDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDD 442
++ A C++ A+ + +W P+ + I + E + AE F+ LK +
Sbjct: 390 NEVAKAFSCMKAALCLYE-ENKEWKPNQKVITGILSWLGDEGSAEDAEAFVSSLKNVI-P 447
Query: 443 LGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 484
+ E++ +++ + AG+ +L +K K++ E +KK+L
Sbjct: 448 MNREMYHAVLKAHIRAGKEVHGLLDGMKTCKIKEDEETKKIL 489
>gi|225459164|ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Vitis vinifera]
Length = 475
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 148/469 (31%), Positives = 251/469 (53%), Gaps = 10/469 (2%)
Query: 25 LYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKR 84
L R+ K S L ++ +V ++ + ++L K + AL++ ME +
Sbjct: 13 LTSRMLKLVFPRRSATAVLQNWIDQGHKVTASDLRNVSRQLLKSKRHKHALEILAWMEAQ 72
Query: 85 G-MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAE 143
+ +D AI L+L+ K+Q + AE YF LP +S LL+ Y KE EKAE
Sbjct: 73 NRFQMSAADHAIRLELIIKIQSLAEAEEYFEHLPNSSSRKAACLPLLHAYVKERAIEKAE 132
Query: 144 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 203
AL+ K+ +L L S PFN +M LY T E++P +I +MK + I + +YN+WM A
Sbjct: 133 ALMLKLNDLGLTVSPHPFNEMMKLYMATSQFERVPTVILQMKQNKIPLNVLSYNLWMSAC 192
Query: 204 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 263
+ V+ ++ AE V ++M D V W+T S LA+IY+++GL +KA ALK E + + +
Sbjct: 193 SEVSGLASAEMVYKDMVDDKNVEVGWSTLSTLANIYLKSGLIKKANLALKNAEKKLSAHN 252
Query: 264 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 323
Y FLIT+Y N EV R+W + + + +Y+ ++ LV L D+ AE+ F+
Sbjct: 253 RLGYFFLITMYASLSNKEEVLRLWEASKKVGGRITSTNYMCILLCLVKLGDIAEAERIFR 312
Query: 324 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
EWES C YDIRV+NV++GAY + G ++ AE L RG PN KTWEI + ++++
Sbjct: 313 EWESKCWKYDIRVSNVLLGAYMRTGSMDKAESLHLHTLERGGCPNYKTWEILMEGWMKSQ 372
Query: 384 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDL 443
+M A++ ++K + W P+ + R+ E+ +V+ ++ K + L
Sbjct: 373 NMDKAINAMKKGFSMLK--HCDWRPNHGLVTAIARYLEEHGNVNDLNQYV----KVIHQL 426
Query: 444 GV---EVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAICV 489
GV +++ L+R + R +L+ ++ +++E+ + + L++A V
Sbjct: 427 GVAKLPLYKSLLRMHLLFQRPVFDILKMMEKDEIEMDDETSALVQAFKV 475
>gi|222637397|gb|EEE67529.1| hypothetical protein OsJ_24995 [Oryza sativa Japonica Group]
Length = 491
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 135/366 (36%), Positives = 216/366 (59%), Gaps = 4/366 (1%)
Query: 77 LSENMEKRGMNKTVS-DQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCK 135
+SE M +G K + D A+HLDL+ ++ G AAE YF +LP+ K YG+LLNCY +
Sbjct: 103 VSEWMNAKGHVKFLPKDHAVHLDLIGEIHGSSAAETYFNNLPDKDKTEKPYGALLNCYTR 162
Query: 136 ELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYT 195
EL+ EK+ A +KMKEL FS++P+N++M LY G EK+P++I EMK++ I+PD+++
Sbjct: 163 ELLVEKSLAHFQKMKELGFVFSTLPYNNIMGLYTNLGQHEKVPSVIAEMKSNGIVPDNFS 222
Query: 196 YNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 255
Y + + + D G E +EEM+ + ++ DW T++ +AS Y++ + EKA ALK+
Sbjct: 223 YRICINSYGTRADFFGMENTLEEMECEPKIVVDWNTYAVVASNYIKGNIREKAFSALKKA 282
Query: 256 ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPN-TANISYLNMIQVLVNLKD 314
E + +D +Y LI+LYG G+ SEV R+W +L+++ N N Y M+ VLV L +
Sbjct: 283 EAKINIKDSDSYNHLISLYGHLGDKSEVNRLW-ALQMSNCNRHINKDYTTMLAVLVKLNE 341
Query: 315 LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 374
+ AE KEWES +D +V NV++ Y ++ L+ AE L + ++G P + +W I
Sbjct: 342 IEEAEVLLKEWESSGNAFDFQVPNVLLTGYRQKDLLDKAEALLDDFLKKGKMPPSTSWAI 401
Query: 375 FSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 434
+ Y GD A + + A+ + G W+P I +++ E DV+ E F++
Sbjct: 402 VAAGYAEKGDAAKAYELTKNALCVYAPNTG-WIPRPGMIEMILKYLGDEGDVEEVEIFVD 460
Query: 435 ILKKAV 440
+LK AV
Sbjct: 461 LLKVAV 466
>gi|224138178|ref|XP_002322749.1| predicted protein [Populus trichocarpa]
gi|222867379|gb|EEF04510.1| predicted protein [Populus trichocarpa]
Length = 505
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 154/456 (33%), Positives = 259/456 (56%), Gaps = 11/456 (2%)
Query: 16 RSKKHLEEA---LYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYY 72
R+KK +A LY+R+ +++ LN ++ + V K ++ + +K+LR K Y
Sbjct: 49 RTKKPWTDAMNVLYNRISSLADQRITISLFLNHWVLEGQPVNKNQLREFIKELRFHKRYA 108
Query: 73 PALKLSENMEKRGMNKTVS-DQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLN 131
AL++S M G + S D A+ LDL++KV GI+ A+ F + P+ K Y +LLN
Sbjct: 109 HALEISTWMTDSGYFELASQDVAVQLDLISKVHGIEQAQKLFNNTPQHLKVLKVYSALLN 168
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CY K + EKAE+++++MK L + + +N ++ Y +TG+P+KI +++QEM+ + I
Sbjct: 169 CYAKAKLVEKAESVVQEMKSLGFANTLLVYNVILNFYYQTGNPDKINSLMQEMEQNGIGC 228
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D + +++ + A A+V+DI G E+ + +M+ D V DWT+++ A Y++ GL +KA
Sbjct: 229 DKFAHSIQLSAYASVSDIVGIEKTLAKMESDPNVFLDWTSYTAAAKGYIKVGLVDKALEM 288
Query: 252 LKELENR-NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
L++ E R +AY LITLY TG +EV RIW L +Y+++I L+
Sbjct: 289 LEKSERLVTGKRRGTAYDSLITLYAATGKTNEVLRIWE-LYKKNEKVYKEAYISIITSLL 347
Query: 311 NLKDLPGAEKCFKEWE-SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
L D AEK F+EWE + YDI + N +I AY+++G +E AE L +RA +G +PNA
Sbjct: 348 KLDDFENAEKIFEEWEFQNHSCYDIHIPNFLIDAYSRKGLVEKAETLIDRAISKGGEPNA 407
Query: 370 KTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 429
KTW + YL+NG AV+ ++KA+ G W PS+E + + + + E D+
Sbjct: 408 KTWYHLATGYLQNGQTLKAVEAMKKAVVVS---GRMWKPSNEILANCLGYLKVEGDLGKL 464
Query: 430 EGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVM 465
F+++L+ D + +++ E L+ A +S V+
Sbjct: 465 TNFMDLLRDN-DIISLDIQERLLNHIKNAKSSSDVL 499
>gi|223949005|gb|ACN28586.1| unknown [Zea mays]
Length = 396
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 126/349 (36%), Positives = 202/349 (57%), Gaps = 1/349 (0%)
Query: 92 DQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKE 151
D AIHLDL+ ++ G++AAE YF +L + K YG+LLNCY +EL+ +KA A MKE
Sbjct: 13 DHAIHLDLIGQIHGVEAAETYFNNLSDKDKTEKPYGALLNCYTRELLVDKALAHFRNMKE 72
Query: 152 LNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISG 211
L FS++P+N LM LY + G E++P+++ EMK++ I+PD+++Y + + + D G
Sbjct: 73 LGFVFSTLPYNDLMGLYTRIGQHERVPSVMAEMKSNGIVPDNFSYRICINSYGTRADFFG 132
Query: 212 AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 271
E +EEM+ + ++ DW T++ +AS Y++ L EKA AL + E + +D AY+ LI
Sbjct: 133 LENTLEEMECEPQIVVDWNTYAVVASNYIKGDLREKAYSALSKAEAKLDKQDPDAYRHLI 192
Query: 272 TLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCAT 331
+LYG G+ SE R+W N Y+NM+ VLV L ++ AE KEWES +
Sbjct: 193 SLYGNLGDKSEAKRLWAVQMSNCKRYINRDYMNMLSVLVKLDEITEAEDLLKEWESSQNS 252
Query: 332 YDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDC 391
+D RV NV++ Y ++ L+ AE L + ++G P + +W I + Y GD+ A +
Sbjct: 253 FDFRVPNVLLTGYRQKALLDKAEMLLDGFLKKGKTPPSTSWGIVAIGYAEKGDVAKAYEM 312
Query: 392 LEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 440
+ A+ + G W+P + +++ E +V E F+ +LK AV
Sbjct: 313 TKNALSVHAPNTG-WIPRPSMLEMILKYLGDEGEVKDVEAFVSLLKAAV 360
>gi|125559056|gb|EAZ04592.1| hypothetical protein OsI_26742 [Oryza sativa Indica Group]
Length = 402
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 130/350 (37%), Positives = 208/350 (59%), Gaps = 3/350 (0%)
Query: 92 DQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKE 151
D A+HLDL+ ++ G AAE YF +LP+ K YG+LLNCY +EL+ EK+ A +KMKE
Sbjct: 13 DHAVHLDLIGEIHGSSAAETYFNNLPDKDKTEKPYGALLNCYTRELLVEKSLAHFQKMKE 72
Query: 152 LNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISG 211
L FS++P+N++M LY G EK+P++I EMK++ I+PD+++Y + + + D G
Sbjct: 73 LGFVFSTLPYNNIMGLYTNLGQHEKVPSVIAEMKSNGIVPDNFSYRICINSYGTRADFFG 132
Query: 212 AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 271
E +EEM+ + ++ DW T++ +AS Y++ + EKA ALK+ E + +D +Y LI
Sbjct: 133 MENTLEEMECEPKIVVDWNTYAVVASNYIKGNIREKAFSALKKAEAKINIKDSDSYNHLI 192
Query: 272 TLYGQTGNLSEVYRIWRSLRLAFPN-TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCA 330
+LYG G+ SEV R+W +L+++ N N Y M+ VLV L ++ AE KEWES
Sbjct: 193 SLYGHLGDKSEVNRLW-ALQMSNCNRHINKDYTTMLAVLVKLNEIEEAEVLLKEWESSGN 251
Query: 331 TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
+D +V NV++ Y ++ L+ AE L + ++G P + +W I + Y GD A +
Sbjct: 252 AFDFQVPNVLLTGYRQKDLLDKAEALLDDFLKKGKMPPSTSWAIVAAGYAEKGDAAKAYE 311
Query: 391 CLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 440
+ A+ + G W+P I +++ E DV+ E F+++LK AV
Sbjct: 312 LTKNALCVYAPNTG-WIPRPGMIEMILKYLGDEGDVEEVEIFVDLLKVAV 360
>gi|449479000|ref|XP_004155477.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 493
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 146/437 (33%), Positives = 247/437 (56%), Gaps = 15/437 (3%)
Query: 7 FGRTKNIAKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLR 66
F TK++ S E+ L+ R+++ G S+ + L+Q+++ ++V + ++ +K+LR
Sbjct: 23 FYSTKSLPSPST---EDTLFRRVYRAGDPRTSIVRVLDQWVEEGRQVKQSDLQTLIKQLR 79
Query: 67 DRKLYYPALKLSENM-EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLT 125
+ AL+L E + +R + D A+ L L++K +G++ AE YF + E+S++H
Sbjct: 80 KFGRFNQALQLCEWVRNERNQCLSTGDIAVELHLISKARGLEQAEKYFSSIGESSRDHKV 139
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
YG+LL+CY + +KAEA+++KM+E+ + + +N+++ LYA G EK+ +++EM+
Sbjct: 140 YGALLHCYVENKNLKKAEAIMQKMREVGFMKTPLSYNAMLNLYAHLGKHEKLAELLKEME 199
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
I PD +TYN+ M A AA +DI+ E+++ +M+ D VA DW T+ + + Y +AGL
Sbjct: 200 EMGIGPDRFTYNIRMNAYAAASDITNMEKLLSKMEADPLVATDWHTYFVVGNGYFKAGLS 259
Query: 246 EKAERALKELENRNAHRD-LSAYQFLITLYGQTGNLSEVYRIWR---SLRLAFPNTANIS 301
E + LK+ E + AYQ+L+TLY GN EVYR+W +LR F N
Sbjct: 260 ENSILMLKKAEQFIGDKQKWLAYQYLMTLYAAIGNKDEVYRVWNLYTNLRKRF----NSG 315
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
YL +I L+ L D+ GAE+ KEWESG ++D R+ N+MI +Y +G ++ AE R
Sbjct: 316 YLCIISSLMKLDDIDGAERILKEWESGDTSFDFRIPNMMINSYCMKGFVDKAEAYINRLI 375
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
G +P A TW++ + Y NG + L+KAI W P + + + +
Sbjct: 376 ETGKEPEANTWDLLASGYHSNGLTNKVAETLKKAISVS---PPHWKPKYHILAACLEYLK 432
Query: 422 QEKDVDGAEGFLEILKK 438
++VD AE + +L K
Sbjct: 433 TNENVDLAEEIIGLLCK 449
>gi|242083618|ref|XP_002442234.1| hypothetical protein SORBIDRAFT_08g016710 [Sorghum bicolor]
gi|241942927|gb|EES16072.1| hypothetical protein SORBIDRAFT_08g016710 [Sorghum bicolor]
Length = 501
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 147/463 (31%), Positives = 244/463 (52%), Gaps = 8/463 (1%)
Query: 23 EALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENME 82
+ L RL K S L ++ + + V K+++ +++LR + AL++ E M
Sbjct: 30 DTLGKRLLKLIYPKRSAVVVLRRWAEEGRTVEKYQLNRVVRELRKYGRFKHALEICEWMR 89
Query: 83 KRG-MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEK 141
R M D A+HLDLVAKV+G+ +A +F D+PE +K T +LL+ Y + EK
Sbjct: 90 TRPEMRLLPGDHAVHLDLVAKVRGLASAVKFFEDMPERAKAPSTCNALLHAYVQHGAREK 149
Query: 142 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 201
AEA++ +M ++PFN +M+LY +G E++P +I+E++ ++ PD TYN+W+
Sbjct: 150 AEAMMAEMARAGYLTCALPFNHMMSLYMASGELERVPEMIKELRRYTV-PDLVTYNMWLT 208
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 261
+ + AE+V MK D RV DW TFS L SIY+ AGL + AL E+E +
Sbjct: 209 YCSKKKSVKSAEKVFALMK-DDRVVPDWMTFSLLGSIYINAGLHVEGRNALVEMEKMASR 267
Query: 262 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 321
++ +AY L+TLY + + R+W +R F ++ Y M+ L D+ AE
Sbjct: 268 KERAAYSSLLTLYASLSDRGNLDRVWNKMRETFRKFSDTEYKCMLTSLTRFNDIAAAEGL 327
Query: 322 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 381
++EWES T D R+ N ++ Y K G +E AE + +G P+ TWE+F YL
Sbjct: 328 YREWESASGTRDSRIPNTILSYYIKNGMIEKAESFLGQIVEKGVKPSYSTWELFIWGYLG 387
Query: 382 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVD 441
+ ++CL+KA+ + KW P+ E E+ D++ AE L + + A
Sbjct: 388 DNKTDKVLECLKKALSSLE----KWEPNHELATAIFSQVEKTGDIEAAEKLLVVFRDA-G 442
Query: 442 DLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 484
+ E++ ++RTYA A ++ R++ +KV + +++LL
Sbjct: 443 YVTTEMYNSVLRTYAEAKLMPLIVDERMEQDKVAMDVETRRLL 485
>gi|226530677|ref|NP_001151760.1| tetratricopeptide-like helical [Zea mays]
gi|195649553|gb|ACG44244.1| tetratricopeptide-like helical [Zea mays]
gi|223942137|gb|ACN25152.1| unknown [Zea mays]
gi|413916645|gb|AFW56577.1| Tetratricopeptide-like helical [Zea mays]
Length = 501
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 150/463 (32%), Positives = 246/463 (53%), Gaps = 9/463 (1%)
Query: 23 EALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENME 82
+ L RL K S L ++ + V K+++ +++LR + AL++ E M
Sbjct: 31 DTLGKRLLKLIYPKRSAVVVLQRWADEGRTVQKYQLNRVVRELRKYGRFKHALEICEWMR 90
Query: 83 KRG-MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEK 141
+ M D A+HLDLVAKV+G+ +A +F D+PE +K T +LL+ Y + EK
Sbjct: 91 TQPEMRLLPGDHAVHLDLVAKVRGLASATKFFEDMPERAKGPSTCNALLHAYVQNGAREK 150
Query: 142 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 201
AEA+L +M + ++PFN +M+LY TG E++P +I+E++ + +PD TYN+W+
Sbjct: 151 AEAMLAEMARVGYLTCALPFNHMMSLYMATGELERVPEMIKELRRYT-LPDLVTYNIWLT 209
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 261
+ + + AE+V MK D V DW TFS L SIY+ AGL + AL E+E R +
Sbjct: 210 YCSKKDSVKSAEKVFGLMKDDC-VVPDWMTFSLLGSIYINAGLHVEGRNALVEMEKRASR 268
Query: 262 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 321
++ +AY L+TLY + + R+W +R F ++ Y M+ L+ D+ AE
Sbjct: 269 KERAAYSSLLTLYASLSDRGNLDRVWNKMRGTFRKFSDTEYKCMLTSLLRFDDIAAAESI 328
Query: 322 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 381
F EWES T D R+ N ++ Y K G ++ AE + +G P+ TWE F YL
Sbjct: 329 FSEWESTSGTRDSRIPNTILSYYIKNGMIKKAESFLDHIVEKGVKPSYSTWEAFVWGYLG 388
Query: 382 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVD 441
+ K+ ++C++KA+ KW P+ E E+ D++ AE L I + A +
Sbjct: 389 DKTDKV-LECMKKALSCLE----KWEPNHELATAIFSQIEKTGDIEAAEKLLVIFRDA-E 442
Query: 442 DLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 484
+ E++ ++RTYA A ++ R++ +KV + +K+LL
Sbjct: 443 YVTTEMYNSVLRTYAEAKLMPLIVDERMEQDKVAMDVETKRLL 485
>gi|22328859|ref|NP_680735.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75146702|sp|Q84JR3.1|PP334_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g21705, mitochondrial; Flags: Precursor
gi|28393142|gb|AAO42004.1| unknown protein [Arabidopsis thaliana]
gi|28827500|gb|AAO50594.1| unknown protein [Arabidopsis thaliana]
gi|332659092|gb|AEE84492.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 492
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 145/463 (31%), Positives = 240/463 (51%), Gaps = 4/463 (0%)
Query: 24 ALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEK 83
LY ++ G SV +L +++ K+V E+ + LR RK + AL++S+ M +
Sbjct: 26 TLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRKRFLHALEVSKWMNE 85
Query: 84 RGMNK-TVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKA 142
G+ + ++ A+HLDL+ +V G AE YF +L E KN TYG+LLNCY ++ EK+
Sbjct: 86 TGVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGALLNCYVRQQNVEKS 145
Query: 143 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 202
EKMKE+ SS+ +N++M LY G EK+P +++EMK ++ PD+Y+Y + + A
Sbjct: 146 LLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPDNYSYRICINA 205
Query: 203 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 262
A+ D+ + +M+R + DW T++ A Y++ G ++A LK ENR +
Sbjct: 206 FGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVELLKMSENRLEKK 265
Query: 263 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 322
D Y LITLY + G EV R+W + N YL ++Q LV + L AE+
Sbjct: 266 DGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLVKIDALVEAEEVL 325
Query: 323 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 382
EW+S YD RV N +I Y + E AE + E RRG ++WE+ + Y
Sbjct: 326 TEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTPESWELVATAYAEK 385
Query: 383 GDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDD 442
G ++ A C++ A+ G KW P + + + E + E F+ L+ +
Sbjct: 386 GTLENAFKCMKTALGVEVG-SRKWRPGLTLVTSVLSWVGDEGSLKEVESFVASLRNCI-G 443
Query: 443 LGVEVFEPLIRT-YAAAGRTSPVMLRRLKMEKVEVSEASKKLL 484
+ +++ L++ GR +L+R+K +K+E+ E + +L
Sbjct: 444 VNKQMYHALVKADIREGGRNIDTLLQRMKDDKIEIDEETTVIL 486
>gi|225446335|ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial [Vitis vinifera]
Length = 499
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 149/421 (35%), Positives = 248/421 (58%), Gaps = 11/421 (2%)
Query: 22 EEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENM 81
+E+L R+ VS+ L Q+ K + + + ++ ++KLR K Y AL++ E +
Sbjct: 34 KESLQSRISPAIDLRVSIVPALEQWRKEGRSIKQQDLHRLIRKLRTFKRYNHALEIYEWI 93
Query: 82 -EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTE 140
+K + + D AI LDL++KV G++ AE YF + P + ++ YG+LLNCY ++ E
Sbjct: 94 RDKFYFDISPGDVAIQLDLISKVHGLEQAEKYFNETPNSLRSFQVYGALLNCYSQKKSLE 153
Query: 141 KAEALLEKMKELNLGF-SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 199
KAEA++++M+ ++GF ++ +N ++ LY++ G EK+ ++QEM+ + I DS+TY +
Sbjct: 154 KAEAIMQEMR--DMGFVKTLSYNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSFTYCIR 211
Query: 200 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 259
+ A A +D+ G E+++ +++ D V +DW + A+ Y++A L EKA LK+ E
Sbjct: 212 LNAYCATSDMEGMEKLLMKLETDPAVNSDWNAYIVAANGYLKADLKEKAVEMLKKSEQFI 271
Query: 260 AHRDLS-AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 318
+ R Y+ L+TLY GN +EVYRIW +L N Y+ M+ L+ L D+ GA
Sbjct: 272 SGRSRRFGYEILLTLYATMGNKTEVYRIW-NLYKTIGKFFNTGYVAMVSSLLKLDDMDGA 330
Query: 319 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 378
EK F+EW SG +D RV N++I AY K+G LE AE+L RA +G +P A TW+ +
Sbjct: 331 EKTFEEWLSGNKFFDFRVPNLLIRAYCKKGLLEKAEQLVSRAIEQGEEPIAVTWDALAAG 390
Query: 379 YLRNGDMKLAVDCLEKA-IDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 437
Y N M+ AVD L+KA + T +G W P+ T+ + + + + DV+ AE + +L+
Sbjct: 391 YHENNQMEKAVDTLKKALLATSQG----WKPNPVTLSACLEYLKGKGDVEEAENLIRLLR 446
Query: 438 K 438
+
Sbjct: 447 E 447
>gi|255553773|ref|XP_002517927.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542909|gb|EEF44445.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 507
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 154/464 (33%), Positives = 253/464 (54%), Gaps = 8/464 (1%)
Query: 25 LYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENM-EK 83
LYDR+ S+ LNQ++ V K + + ++ K + AL++S M +
Sbjct: 50 LYDRIQIVRDPKESIIPVLNQWVSEGHTVGKALLQSLVHLMKGYKRFNHALEMSHWMTDC 109
Query: 84 RGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAE 143
R + + SD A+ L+L+ +V G AE YF + + K+ YG+LL+ Y +E +KAE
Sbjct: 110 RYFSLSPSDVAVRLELIYRVYGSAHAEMYFEKISDKLKSGNVYGALLSGYVRENSVQKAE 169
Query: 144 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 203
A+L++M+E + SS P+N ++ LYA+ G EKI + +EM+ + I D YT M A
Sbjct: 170 AVLQEMREKGIATSSFPYNIMINLYAQNGAFEKIDILKEEMERNGIPQDKYTMRNLMAAY 229
Query: 204 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL-ENRNAHR 262
A +DISG ER++ +++ ++ W +S AS Y++ GL EKA + L+++ E +
Sbjct: 230 VAASDISGMERILNQLETHPQLGHGWQAYSVAASGYLKVGLIEKALKMLRKMEETMPIGK 289
Query: 263 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 322
SA+ +L+TLY +TG E+YR+W S + + MI L + D+ GAE+ F
Sbjct: 290 KTSAFNYLLTLYAKTGRKDELYRVWNSYK-PLAEVKETQFCCMISSLEKVDDIEGAERIF 348
Query: 323 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 382
+EWES C YD RV N ++ AY ++G L E + G P A TW + Y+
Sbjct: 349 EEWESQCMMYDFRVLNKLLLAYCRKG-LYTKAEAAFKKAAEGRTPYASTWITMAMSYIGQ 407
Query: 383 GDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDD 442
M AV+ L+KAI R W P+ T+ T + + E++ DV+G E ++ L K+ +
Sbjct: 408 NQMSKAVEMLKKAISVSRKG---WKPNPITLTTCLDYLEEQGDVEGIEEIVKSL-KSTES 463
Query: 443 LGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEA 486
L +++ L+RTY AAG ++ ++KM+ + E + K+LE+
Sbjct: 464 LTRDIYHRLVRTYTAAGIPVTKVIDKMKMDNIAADEETHKILES 507
>gi|147775992|emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]
Length = 499
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 148/421 (35%), Positives = 247/421 (58%), Gaps = 11/421 (2%)
Query: 22 EEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENM 81
+E+L R+ VS+ L Q+ K + + + ++ ++KLR K Y AL++ E +
Sbjct: 34 KESLQSRISPAIDLRVSIVPALEQWRKEGRSIKQQDLHRLIRKLRTFKRYNHALEIYEWI 93
Query: 82 -EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTE 140
+K + + D AI LDL++KV G++ AE YF + P + ++ YG+LLNCY ++ E
Sbjct: 94 RDKFYFDISPGDVAIQLDLISKVHGLEQAEKYFNETPNSLRSFQVYGALLNCYSQKKSLE 153
Query: 141 KAEALLEKMKELNLGF-SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 199
KAEA++++M+ ++GF ++ +N ++ LY++ G EK+ ++QEM+ + I DS+TY +
Sbjct: 154 KAEAIMQEMR--DMGFVKTLSYNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSFTYCIR 211
Query: 200 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 259
+ A A +D+ G E+++ +++ D V +DW + A+ Y++A L EKA LK+ E
Sbjct: 212 LNAYCATSDMEGMEKLLMKLETDPAVNSDWNAYIVAANGYLKADLKEKAVEMLKKSEQFI 271
Query: 260 AHRDLS-AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 318
+ R Y+ L+TLY GN +E YRIW +L N Y+ M+ L+ L D+ GA
Sbjct: 272 SGRSRRFGYEILLTLYATMGNKTEXYRIW-NLYKTIGKFFNTGYVAMVSSLLKLDDMDGA 330
Query: 319 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 378
EK F+EW SG +D RV N++I AY K+G LE AE+L RA +G +P A TW+ +
Sbjct: 331 EKTFEEWLSGNKFFDFRVPNLLIRAYCKKGLLEKAEQLVSRAIEQGEEPIAVTWDALAAG 390
Query: 379 YLRNGDMKLAVDCLEKA-IDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 437
Y N M+ AVD L+KA + T +G W P+ T+ + + + + DV+ AE + +L+
Sbjct: 391 YHENNQMEKAVDTLKKALLATSQG----WKPNPVTLSACLEYLKGKXDVEEAENLIRLLR 446
Query: 438 K 438
+
Sbjct: 447 E 447
>gi|255553771|ref|XP_002517926.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542908|gb|EEF44444.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 143/420 (34%), Positives = 237/420 (56%), Gaps = 10/420 (2%)
Query: 23 EALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENM- 81
+ LY R+ K G +S+ L ++L+ V K E+ +K+LR + + AL++SE M
Sbjct: 39 DTLYGRISKAGKPSISIVPILEKWLEEGNDVKKPELQKFVKQLRKYRRFTHALQVSEWMT 98
Query: 82 EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEK 141
+K+G + D A+ LDL++KV G+ AE YF +P+TS++ YG+LLNC + K
Sbjct: 99 DKKGCSLLPGDVAVRLDLISKVHGLVKAEEYFNSIPDTSRDRQVYGALLNCCAHSKLLGK 158
Query: 142 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 201
AEA ++KMK+L +S+ +N +++LY+ G+ EK+ ++QEM+ + I D TY + +
Sbjct: 159 AEATMQKMKDLGFVKNSLSYNVMLSLYSHMGNYEKLDPLVQEMEENGISCDRITYCIRLN 218
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK---ELENR 258
A +DI G E+++ +M+ D ++ + + A+ Y++AGL +K LK +L +
Sbjct: 219 ACVNSSDIEGMEKLLMKMEVDPNISVGFHAYVIAANGYLKAGLVDKTLIMLKRSEQLISG 278
Query: 259 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 318
N R AY+FL+TLY +GN +EVYRIW + N Y+ MI L+ L D+ GA
Sbjct: 279 NTRR--FAYEFLLTLYTASGNKAEVYRIWNKYK-EIGRFFNSGYICMISSLLKLDDIDGA 335
Query: 319 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 378
E+ F+EW+S +DIR+ N M+ Y+++G LE AE + G +P+A +W +
Sbjct: 336 ERIFEEWDSKKVLFDIRIPNSMVNVYSRKGHLEKAETYINKIVASGEEPDATSWNHLAAG 395
Query: 379 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 438
Y +G M AV+ + KAI + W PS T+ + + + D + E L+I K+
Sbjct: 396 YHSSGQMTKAVETIRKAISVSKPG---WKPSLLTLSACLEFLKGQGDAETLEELLKIAKE 452
>gi|449438486|ref|XP_004137019.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
gi|449479168|ref|XP_004155524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 500
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 252/451 (55%), Gaps = 9/451 (1%)
Query: 37 VSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENM-EKRGMNKTVSDQAI 95
+SV L +++ + + K E+ + ++D + + AL++S+ M ++R ++ + SD A+
Sbjct: 50 ISVVPVLEKWVGDGRAIGKPELQYLVHLMKDSRRFNHALEISQWMTDRRYLSLSPSDAAV 109
Query: 96 HLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLG 155
LDL+ V G++ AENYF + K YG+LL CY +E EKAEA++++M+++ +
Sbjct: 110 RLDLIHSVHGLEHAENYFNSISIRLKTSNVYGALLGCYVREKSLEKAEAIMQEMRKMGIA 169
Query: 156 FSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERV 215
+S +N L+ LYA+ G +KI +I+EMK I D Y+ A A DISG E++
Sbjct: 170 TTSFAYNVLINLYAQIGQHDKIDLLIEEMKTKGIPQDIYSIRNLCAAYVAKADISGMEKI 229
Query: 216 IEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR-NAHRDLSAYQFLITLY 274
++ ++ D + ADWT +S A+ Y+ AGL +A LK+ E + + + A++FL++LY
Sbjct: 230 LKRIEEDSELKADWTIYSIAANGYLTAGLETEALSMLKKTEEKVRPNTNKFAFKFLLSLY 289
Query: 275 GQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDI 334
+TG+ +EVYR+W + + T + Y MI L L D+ GAE+ F+EWES C YD
Sbjct: 290 ERTGHKNEVYRVWNTFKPLTKETC-VPYALMITSLAKLDDIEGAERIFQEWESKCTVYDF 348
Query: 335 RVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
RV N ++ AY ++G L+ AE + +A P TW I + Y G M AV+ L+K
Sbjct: 349 RVLNRLLVAYCRKGLLDKAESVVNQAVVERT-PFRSTWSILATGYAEYGHMSKAVEMLKK 407
Query: 395 AIDTGRGDGGKWVP-SSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIR 453
AI GR + W P + + + + E++ D + + + + K + + E++ L+R
Sbjct: 408 AILVGRQN---WKPKQGDILEACLDYLEKQGDAETMDEIVRLCKSS-GTVMKEMYYRLLR 463
Query: 454 TYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 484
T A G+ +L ++KM+ E K+L
Sbjct: 464 TSIAGGKPVISILEQMKMDGFAADEEVDKIL 494
>gi|449438086|ref|XP_004136821.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 486
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 143/435 (32%), Positives = 245/435 (56%), Gaps = 11/435 (2%)
Query: 7 FGRTKNIAKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLR 66
F TK++ S E+ L+ R+++ G S+ + L+Q+++ ++V + ++ +K+LR
Sbjct: 23 FYSTKSLPSPST---EDTLFRRVYRAGDPRTSIVRVLDQWVEEGRQVNQSDLQKLIKQLR 79
Query: 67 DRKLYYPALKLSENMEKRGMNKTVSDQ--AIHLDLVAKVQGIDAAENYFVDLPETSKNHL 124
+ AL+L E E+ NK S AI L L++K +G++ AE YF + E+S++H
Sbjct: 80 TFGRFNHALQLCE-WERNERNKCPSPGHIAIQLHLISKARGLEQAEEYFSSIGESSRDHK 138
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
YG+LL+CY + +KAEA+++KM+E+ + + +N+++ LYA+ G EK+ +++EM
Sbjct: 139 VYGALLHCYVENKNLKKAEAIMQKMREVGFMKTPLSYNAMLNLYAQLGKHEKLDELVKEM 198
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ I + +TYNV M A AA +DI+ E+++ +M+ D VA DW + + + Y +AGL
Sbjct: 199 EEMGIGHNRFTYNVRMNAYAAASDITNMEKLLSKMEADPLVATDWHIYFTVGNGYFKAGL 258
Query: 245 FEKAERALKELENRNAHRD-LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
E + LK+ E + AYQ+L+TLY GN EVYR+W +L N YL
Sbjct: 259 SENSISMLKKAEQLIGDKQKWLAYQYLMTLYAAIGNKDEVYRVW-NLYTNLQKRFNSGYL 317
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I L+ L D+ GAE+ KEWESG ++D ++ N+MI +Y +G ++ AE R
Sbjct: 318 CIISSLMKLDDIDGAERILKEWESGDTSFDFKIPNMMINSYCTKGFVDKAEAYISRLIEN 377
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQE 423
G +P A W+ + Y NG A + L+KAI +W P+ + + + + +
Sbjct: 378 GKEPRAYAWDRLASGYHSNGLTNKAAETLKKAISVS---PPRWKPNYDILAACLEYLKTN 434
Query: 424 KDVDGAEGFLEILKK 438
+V+ AE + +L K
Sbjct: 435 GNVELAEEIIGLLCK 449
>gi|125579556|gb|EAZ20702.1| hypothetical protein OsJ_36321 [Oryza sativa Japonica Group]
Length = 491
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 130/380 (34%), Positives = 211/380 (55%), Gaps = 7/380 (1%)
Query: 105 GIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSL 164
G+ +AE +F D+PE +K T +LL+ Y + +KAEA+LE+M + ++PFN +
Sbjct: 103 GLPSAEKFFEDMPERAKGPSTCNALLHAYVQHGRRDKAEAMLEEMAKAGYLTCALPFNHM 162
Query: 165 MTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGR 224
M+LY +G EK+P +I+E++ +I PD TYN+W+ + N + AE+V + MK D R
Sbjct: 163 MSLYMSSGELEKVPEMIKELRRYTI-PDLVTYNIWLTYCSKKNSVKAAEKVYDLMK-DER 220
Query: 225 VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVY 284
V DW TFS L SIY+ AGL K AL E+E R + ++ +AY L+TLY + +
Sbjct: 221 VVPDWMTFSLLGSIYINAGLHVKGRDALVEMEKRASRKERAAYSSLLTLYASLSDRGNLD 280
Query: 285 RIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAY 344
R+WR +R F ++ Y M+ L D+ AE + EWES T D R+ N ++ Y
Sbjct: 281 RVWRKMRETFRKFSDTEYKCMLTSLTRFGDIAEAESFYSEWESASGTRDSRIPNTILAFY 340
Query: 345 AKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGG 404
K G +E AE + ++G P+ TWE+F YL +G M ++CL+KA+
Sbjct: 341 IKNGMMEKAEGFLDHIVQKGVKPSYSTWELFVWGYLSDGRMDKVLECLKKALSCLE---- 396
Query: 405 KWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPV 464
KW P+ + E++ D++ AE L + ++A + E++ ++RTYA A +
Sbjct: 397 KWDPNPQLATAIYSQIEEKGDIEAAEKLLVMFREA-GYVTTEIYNSVLRTYAKAELMPLI 455
Query: 465 MLRRLKMEKVEVSEASKKLL 484
+ R+ +KV + + ++ LL
Sbjct: 456 VDERMDQDKVSMDDETRSLL 475
>gi|357446577|ref|XP_003593564.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482612|gb|AES63815.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 495
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 139/467 (29%), Positives = 250/467 (53%), Gaps = 4/467 (0%)
Query: 10 TKNIAKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRK 69
++N + + K + +LY + G+ SV QL+ ++ +V E+ ++ LR R
Sbjct: 15 SRNRSYYTSKTKKPSLYSVISPLGNQTTSVAPQLDDWVYKGNKVSVGELQRIVRDLRKRS 74
Query: 70 LYYPALKLSENMEKRGMNK-TVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGS 128
+ AL++SE M K G+ + + A+HLDL +V G AAE YF L + +N T+G+
Sbjct: 75 RFTQALQVSEWMNKIGVCIFSPVEHAVHLDLTGRVHGFYAAETYFNSLKDIERNEKTHGA 134
Query: 129 LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS 188
LLNCY ++ +K+ + L+KMKEL SS+ +N++M LY G EK+ + EMK +
Sbjct: 135 LLNCYVRQRQVDKSLSHLKKMKELGFALSSLTYNNIMCLYTNIGQHEKVSDVFNEMKENH 194
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
++PD+++Y + + + +DI G +++EM+ + DW T+S +A+ Y++A L +A
Sbjct: 195 VLPDNFSYRICIGSYGVRSDIDGMNAILKEMESQPHIVMDWNTYSVVANFYIKAELSSEA 254
Query: 249 ERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQV 308
AL++ E R +D Y LI+LY + G +EV R+W + A N ++ M++
Sbjct: 255 IDALRKCEKRLDDKDGEGYNHLISLYARLGKKNEVLRLWDMEKSACKRCLNRDFITMLES 314
Query: 309 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 368
LV L++ A+K KEWE YD V NV++ Y+++ E AE + + ++ +
Sbjct: 315 LVKLEEFDEADKILKEWEFSGNCYDYGVPNVVVVGYSEKDFPEKAEAILQDIWKKRKYTD 374
Query: 369 AKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDG 428
+W + +D YL G+M+ A++CL+ A+ + K P+ I + V+
Sbjct: 375 TSSWILVADRYLLKGEMEKALECLKTAV-CLYPENKKRKPNHRVISSIYSWIGDNASVED 433
Query: 429 AEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVE 475
AE + +LKK + ++ L++ Y A + +L R+K + ++
Sbjct: 434 AEALVRLLKKFQKNR--HMYHSLLKAYVRADKEVDGVLDRMKEDNID 478
>gi|297799892|ref|XP_002867830.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313666|gb|EFH44089.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 492
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 140/463 (30%), Positives = 237/463 (51%), Gaps = 4/463 (0%)
Query: 24 ALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEK 83
LY ++ G SV +L +++ K+V E+ + LR RK + AL++S+ M +
Sbjct: 26 TLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRKRFLHALEVSKWMNE 85
Query: 84 RGMNK-TVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKA 142
G+ + ++ A+HLDL+ +V G AE YF +L E KN TYG+LLNCY ++ EK+
Sbjct: 86 TGVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNEKTYGALLNCYVRQQNVEKS 145
Query: 143 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 202
+KMKE+ SS+ +N++M LY G EK+P ++ EMK ++ PD+Y++ + + A
Sbjct: 146 LLHFQKMKEMGFVSSSLTYNNIMCLYTNIGQHEKVPGVLDEMKEENVAPDNYSFRICINA 205
Query: 203 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 262
A++D+ ++ +M+R DW T++ A Y++ G ++A LK E R +
Sbjct: 206 FGAMSDLERIGGILRDMERRPDFTMDWNTYAVAAKFYIDGGDCDRAVELLKMSEYRLEKK 265
Query: 263 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 322
D Y LITLY + GN EV R+W + A N YL ++Q L+ + L AE
Sbjct: 266 DGEGYNHLITLYARLGNKIEVLRLWELEKEACKRRINQDYLTVLQSLMKIDGLKEAEVVL 325
Query: 323 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 382
EWES YD RV N +I Y + E AE + E RRG ++W + + Y
Sbjct: 326 TEWESSGNCYDFRVPNTVIRGYTGKSMEEKAEAMLEDLARRGKTTTPESWGLVATAYAEK 385
Query: 383 GDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDD 442
G + A C++ A+ + KW P + + + + E + E F+ L+ +
Sbjct: 386 GALGNAFKCMKTALGI-EVENRKWRPGLKLVTSVLSWLGGEGSLKEVESFVASLRNCI-G 443
Query: 443 LGVEVFEPLIRT-YAAAGRTSPVMLRRLKMEKVEVSEASKKLL 484
+ +++ L++ G +L+R+K +++E E + +L
Sbjct: 444 VNKQMYHALVKADIREGGSNIDTLLKRMKDDQIETDEETTVIL 486
>gi|224121680|ref|XP_002330626.1| predicted protein [Populus trichocarpa]
gi|222872230|gb|EEF09361.1| predicted protein [Populus trichocarpa]
Length = 441
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 149/449 (33%), Positives = 246/449 (54%), Gaps = 30/449 (6%)
Query: 28 RLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENM-EKRGM 86
R+ + G+ VS+ + Q+LK + + ++ + +K R + + AL++S+ M ++RG
Sbjct: 9 RISRAGNPKVSIIPVIEQWLKEGNSIKQSDLQNFIKLFRRHRRFSHALQISQWMSDERGS 68
Query: 87 NKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALL 146
++ D A+ LDL++KV G++ AE Y+ +P+ + YG+LLNCY + EKAEA +
Sbjct: 69 EQSPGDFAVRLDLISKVHGLEQAEEYYNSIPDHLRGTQVYGALLNCYAHKRRLEKAEATM 128
Query: 147 EKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV 206
+KM+EL L ++ +N +++LY+ G EK+ A+++EM+ + D YT+N+ + A A
Sbjct: 129 QKMRELGL-VQTLSYNVMLSLYSHMGRYEKLEALVKEMEEKGVNSDIYTFNIRLHAYVAT 187
Query: 207 NDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE--------NR 258
++I E+++ +M+ D + D+ TF +A+ Y++AGL EK+ LK E
Sbjct: 188 SNIEEMEKLLMKMETDSLINIDFHTFFAVANGYLKAGLLEKSIVMLKRAEELTVPMVGTT 247
Query: 259 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI---SYLNMIQVLVNLKDL 315
AH AY+ L+TLYG GN VYR+W S + NT I +Y+ MI L+ L D+
Sbjct: 248 KAH----AYEMLLTLYGSAGNKDGVYRVWNS----YKNTGRIFNSTYICMINSLMRLGDI 299
Query: 316 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 375
GAE +EW S YDIR+ N MI AY+++G + AEE + G A +W+
Sbjct: 300 DGAEWISEEWVSRKTLYDIRIPNTMIRAYSRKGLWKKAEEYVNKIVESGMQLEASSWDHL 359
Query: 376 SDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEI 435
+ Y G M AV+ L+KAI + W P+ T++T + + E + D + AE E+
Sbjct: 360 ATGYHFGGQMAKAVETLKKAISISKPG---WKPNPYTLKTCLWYLESKGDEEAAE---EL 413
Query: 436 LKKAVDDLGVEVFEPLIRTYAAAGRTSPV 464
LK + V P + YA SP+
Sbjct: 414 LKFVSEHHPV---SPAVILYAGILEQSPL 439
>gi|125532539|gb|EAY79104.1| hypothetical protein OsI_34210 [Oryza sativa Indica Group]
Length = 513
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 146/443 (32%), Positives = 249/443 (56%), Gaps = 11/443 (2%)
Query: 46 FLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENM-EKRGMNKTVSDQAIHLDLVAKVQ 104
+L + V K E+ +K LR R+ + AL+LS M E+R ++ + D A L+L++KV
Sbjct: 73 WLAEEHPVSKPELQSLVKYLRRRRRFSQALELSMWMTERRHLHLSPGDVAYRLELISKVH 132
Query: 105 GIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSL 164
G+D A YF +P + YGSLL CY + EKAE L E M+ + + +S +N++
Sbjct: 133 GLDKAVEYFDAVPNQLRELQCYGSLLRCYTEAERVEKAEELFENMRGMGMA-NSYAYNAM 191
Query: 165 MTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGR 224
M LY++ G E++ ++ + M+ I+PD +T + + A A V D+ E+V+E+ +
Sbjct: 192 MNLYSQIGQVERVHSMYKSMEEGGIVPDIFTIDNLVSAYADVEDVEAIEKVLEKASCNNL 251
Query: 225 VAADWTTFSNLASIYVEAGLFEKAERALKELENR-NAHRD-LSAYQFLITLYGQTGNLSE 282
++ W +F+ + ++++AG+ E+A +A +E E R A +D AY FL+T+Y SE
Sbjct: 252 MS--WHSFAIVGKVFMKAGMQERALQAFQESEKRITARKDGRVAYGFLLTMYADLQMDSE 309
Query: 283 VYRIWRSLRLAFPNTA-NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 341
V RIW R P +A N Y+ I VL+ + D+ GAEK ++EWES +D R+ N+++
Sbjct: 310 VDRIWDVYRSKVPASACNTMYMCRISVLLKMNDIVGAEKAYEEWESKHVYHDSRLINILL 369
Query: 342 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRG 401
AY KEG +E AE L ++ ++G P + TW + Y + G A D +KA+ +
Sbjct: 370 TAYCKEGLMEKAEALVDQFIKKGRTPFSNTWYKLAGGYFKVGQASKAADLTKKALASA-- 427
Query: 402 DGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 461
+W P + + +F ++K+V+ AE +L++ V L +V+ L++TY AG
Sbjct: 428 -SNEWKPDLANVLMSINYFAEQKNVEAAEEMASLLQRLV-PLTRDVYHGLLKTYVNAGEP 485
Query: 462 SPVMLRRLKMEKVEVSEASKKLL 484
+ +L R+K + +E E + K+L
Sbjct: 486 ASDLLDRMKKDGIEADEETDKIL 508
>gi|449431834|ref|XP_004133705.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Cucumis sativus]
gi|449478158|ref|XP_004155237.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Cucumis sativus]
Length = 492
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 131/414 (31%), Positives = 235/414 (56%), Gaps = 4/414 (0%)
Query: 25 LYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKR 84
LY R+ G + +V LNQ+++ + + +E+ ++ LR + Y AL++SE M +
Sbjct: 48 LYARISPLGDPECTVVPVLNQWIEEGRNIKDFELRRIVRDLRTCRRYRQALEVSEWMCSK 107
Query: 85 GM-NKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAE 143
G+ + T D AI LDL+ +V+G+D+AE YF + + YG+LLNCY +E + +K+
Sbjct: 108 GLFSLTTRDFAIQLDLIGQVRGLDSAEKYFGSVSNQKEIGKLYGALLNCYVREGLIDKSL 167
Query: 144 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 203
A ++KMKE+ L S + +N +M LY TG +K+P ++ EMK + ++PD+++Y + + +
Sbjct: 168 AHMQKMKEMGLASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICISSY 227
Query: 204 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 263
A +D+ E V++EM+ ++ DWTT+S +A +++AG+ +KA L++ E++ D
Sbjct: 228 GARSDVISMENVLKEMEGQTHISMDWTTYSMVAGFFIKAGMHDKAMNYLRKCEDK-VDED 286
Query: 264 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 323
+ LI+ Y G+ +EV R+W L+ N Y+ M+ LV L+ L AE
Sbjct: 287 ALGFNHLISHYTNLGHKNEVMRLWALLKKG-KKQLNRDYITMLGSLVKLELLEEAENLVM 345
Query: 324 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
EWES C YD RV NV++ Y+++G +E AE++ G P+ +W I + YL
Sbjct: 346 EWESSCQCYDFRVPNVVLIGYSQKGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLEKQ 405
Query: 384 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 437
+++ A +C+++A+ +G W P + + +R + + + + F+ LK
Sbjct: 406 NLEKAFECMKEALAV-KGQNKVWRPKPNVLSSILRWLSENRRYEEMKEFMSSLK 458
>gi|302142021|emb|CBI19224.3| unnamed protein product [Vitis vinifera]
Length = 560
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 131/374 (35%), Positives = 207/374 (55%), Gaps = 1/374 (0%)
Query: 25 LYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKR 84
L R+ K S L ++ +V ++ + ++L K + AL++ ME +
Sbjct: 40 LTSRMLKLVFPRRSATAVLQNWIDQGHKVTASDLRNVSRQLLKSKRHKHALEILAWMEAQ 99
Query: 85 G-MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAE 143
+ +D AI L+L+ K+Q + AE YF LP +S LL+ Y KE EKAE
Sbjct: 100 NRFQMSAADHAIRLELIIKIQSLAEAEEYFEHLPNSSSRKAACLPLLHAYVKERAIEKAE 159
Query: 144 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 203
AL+ K+ +L L S PFN +M LY T E++P +I +MK + I + +YN+WM A
Sbjct: 160 ALMLKLNDLGLTVSPHPFNEMMKLYMATSQFERVPTVILQMKQNKIPLNVLSYNLWMSAC 219
Query: 204 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 263
+ V+ ++ AE V ++M D V W+T S LA+IY+++GL +KA ALK E + + +
Sbjct: 220 SEVSGLASAEMVYKDMVDDKNVEVGWSTLSTLANIYLKSGLIKKANLALKNAEKKLSAHN 279
Query: 264 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 323
Y FLIT+Y N EV R+W + + + +Y+ ++ LV L D+ AE+ F+
Sbjct: 280 RLGYFFLITMYASLSNKEEVLRLWEASKKVGGRITSTNYMCILLCLVKLGDIAEAERIFR 339
Query: 324 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
EWES C YDIRV+NV++GAY + G ++ AE L RG PN KTWEI + ++++
Sbjct: 340 EWESKCWKYDIRVSNVLLGAYMRTGSMDKAESLHLHTLERGGCPNYKTWEILMEGWMKSQ 399
Query: 384 DMKLAVDCLEKAID 397
+M A++ ++K
Sbjct: 400 NMDKAINAMKKGFS 413
>gi|147766620|emb|CAN73943.1| hypothetical protein VITISV_032243 [Vitis vinifera]
Length = 448
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 147/443 (33%), Positives = 241/443 (54%), Gaps = 28/443 (6%)
Query: 24 ALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENM-E 82
+LYDR+ S+ LNQ+++ + V K ++ ++ ++D + ++ AL++S+ M +
Sbjct: 23 SLYDRIQAVRDPKASISPLLNQWIEEGQTVSKPQLQSLVRIMKDFRRFHHALEISQWMTD 82
Query: 83 KRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKA 142
+R T SD AI LDL++ V P T YG+LL+ Y +E EKA
Sbjct: 83 RRYFTLTPSDAAIRLDLISMV-------------PWTXAGXDAYGALLSGYVREKSVEKA 129
Query: 143 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 202
EA ++KM+E++ SS P+N L+ LY++TG+ KI A+IQEM+ +I D++T M A
Sbjct: 130 EATMQKMREMDFATSSFPYNMLINLYSQTGNHGKIEALIQEMQXKAIPCDAFTVXNLMVA 189
Query: 203 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 262
A +DIS E+ + M+ D ++ DW +S AS Y++ GL +KA LK++E+ H
Sbjct: 190 YVAASDISAMEKXLNRMEEDPHISVDWNIYSVAASGYLKVGLIDKALEMLKKIESNRPHL 249
Query: 263 D-LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 321
+ SA++ L++LY +T + E+YR+W + ++ +Y MI L L D+ GAEK
Sbjct: 250 ERXSAFKXLLSLYARTXHKQELYRVWNLYKPSYEYPE--AYSCMITCLTKLDDIEGAEKI 307
Query: 322 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 381
F+EWE C YD RV N ++ AY K + AE L + P A TW I + Y+
Sbjct: 308 FQEWECECTMYDFRVLNRLLSAYCKRCLFDKAESLVNKVIEERM-PYASTWNILAKGYVE 366
Query: 382 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVD 441
+ M AV+ L+KAI GR W P+S + + + E + +++ E + K
Sbjct: 367 DKQMPKAVEMLKKAISVGRKG---WRPNSIILDACIEYLEGQGNLEEIEEIARLCK---- 419
Query: 442 DLGV---EVFEPLIRTYAAAGRT 461
+LG+ ++ L+RT AA ++
Sbjct: 420 NLGIPDGDIHHRLLRTSAAGEKS 442
>gi|224084592|ref|XP_002307350.1| predicted protein [Populus trichocarpa]
gi|222856799|gb|EEE94346.1| predicted protein [Populus trichocarpa]
Length = 511
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 135/426 (31%), Positives = 222/426 (52%), Gaps = 8/426 (1%)
Query: 63 KKLRDRKLYYPALKLSENME-KRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK 121
K+L K Y AL++ + ME + T A+ ++L+ KV G++ A YF +P +
Sbjct: 86 KQLLKSKRYKQALEILQWMENQNNFRITPGHHALMMELIVKVNGLNKAGEYFERIPGSGS 145
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
LL+ Y KE KAE+ + K+ L + P+N +M LY EK+P +I
Sbjct: 146 KKAASLPLLHGYVKERDISKAESFMIKLSSSGLLVTPHPYNEMMKLYMALSQYEKVPLVI 205
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EMK + + + +YN+WM A V +++ AE V +EM D V W+T ++LA++Y++
Sbjct: 206 AEMKRNKLCRNVLSYNLWMGAFGEVFEVAKAEMVYKEMVSDENVGVGWSTLASLANVYIK 265
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
AG +KA LK+ E + + Y FLITLY N V R+W + +
Sbjct: 266 AGFVDKALLVLKDAEMKLSTNGRLGYFFLITLYSSLKNKEGVLRLWEASKAVGGRIPCAD 325
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y+ +I LV + DL AE+ F EWE+ C YDIRV+NV++GAY + G + AE
Sbjct: 326 YMCVISCLVKVGDLVAAEQVFAEWETNCFKYDIRVSNVLLGAYVRNGLMGKAESFHLHTV 385
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
RG PN KTWEI + ++++ M A+D ++K + + W PS + HFE
Sbjct: 386 ERGGCPNYKTWEILMEGWVKSQKMDKAIDAMKKGFSVLKVERCDWRPSHSILMAIAEHFE 445
Query: 422 QEKDVDGAEGFLEILKKAVDDLGV---EVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSE 478
+ + + A ++ KAV LGV +++ +R Y A R + +L+ ++ +++E+ +
Sbjct: 446 KHGNFEDANHYI----KAVHGLGVATLPLYKLFLRMYLNAQRPAWDILKMMEKDRIELDD 501
Query: 479 ASKKLL 484
+ L+
Sbjct: 502 ETSALV 507
>gi|224138182|ref|XP_002322750.1| predicted protein [Populus trichocarpa]
gi|222867380|gb|EEF04511.1| predicted protein [Populus trichocarpa]
Length = 516
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 138/419 (32%), Positives = 237/419 (56%), Gaps = 9/419 (2%)
Query: 36 DVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENM-EKRGMNKTVSDQA 94
+VSV L+++++ + +++ + +K+LR + Y+ AL++S M +KR + T A
Sbjct: 59 NVSVIPVLDKWIQEGETIWEDLIHALIKELRQYRRYHHALEISMWMTDKRYLALTSRAVA 118
Query: 95 IHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNL 154
+ LDL++KV GI+ ENYF ++P K +YG+LLNCY EKAEA++++M+EL
Sbjct: 119 VRLDLISKVHGIEQVENYFNNIPTKLKGLESYGALLNCYAYVKSVEKAEAVMQRMRELGF 178
Query: 155 GFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAER 214
+ F ++ LY KTG+ EK+ +++EM+ + I D + Y + + + AA +D G E+
Sbjct: 179 ARKPLVFTVMLNLYYKTGNTEKLDPLMREMEENGISFDKFAYCIRLSSYAAASDSEGLEK 238
Query: 215 VIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR-NAHRDLSAYQFLITL 273
++ ++ D V DW T++ +A+ Y + GL +KA LK E R + Y +L+T
Sbjct: 239 TLKRIESDPNVVLDWATYATVANGYSKVGLLDKALEMLKRCERLITGERRSTPYDYLMTQ 298
Query: 274 YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYD 333
Y TG +V R+W + N NIS +I L+ DL AEK F+EWES D
Sbjct: 299 YATTGTKEDVLRVWELHKRYVGNRKNIS---VITSLLKFDDLESAEKIFEEWESQKLCDD 355
Query: 334 IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
I + N ++ AY+++G LE AE L +R G PNA TW + + YL++ AV+ ++
Sbjct: 356 IIIPNFLVDAYSRKGLLEKAEMLLQRTMSNGTKPNANTWYLLAKGYLQHNQTPKAVEAMK 415
Query: 394 KAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLI 452
+ I G + PS+ + ++H + D+D AEGF+ +L++ D + +++ + L+
Sbjct: 416 EMIVLS---GPRSRPSTVSWVACLQHLKDSGDMDNAEGFINLLREK-DIISLDIQDKLL 470
>gi|358344191|ref|XP_003636175.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
gi|355502110|gb|AES83313.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
Length = 790
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 119/320 (37%), Positives = 185/320 (57%), Gaps = 2/320 (0%)
Query: 89 TVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEK 148
+ SD AI LDL+A+V G+ +AE++F++L K+ TYG+LLN Y EKAE+LLE
Sbjct: 311 SASDVAIQLDLIARVHGVSSAESFFLNLTNDLKDKRTYGALLNAYVHSRSREKAESLLEV 370
Query: 149 MKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVND 208
M+ S+PFN +MTL +K+ ++ EMK +I D YTYN+W+ + +
Sbjct: 371 MRSKRYLTHSLPFNLMMTLSMNLKDYDKVDMLVSEMKEKNIQLDIYTYNIWLSSCGSQGS 430
Query: 209 ISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQ 268
I E+V E+M +D + +W+TFS +A++Y++ LFEKA+ LK+ E R RD +
Sbjct: 431 IEKMEQVFEQMLKDPTIIPNWSTFSTMAAMYIKMELFEKAQECLKKAEGRILGRDKVPFH 490
Query: 269 FLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESG 328
+L++LYG GN EVYR+W + + FP+ N+ Y +I V + D+ AEK ++EW S
Sbjct: 491 YLLSLYGSVGNKDEVYRVWNNYKSMFPSIPNLGYHAVISSFVRMDDIERAEKLYEEWVSV 550
Query: 329 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 388
+ D R+ N++I Y K+G+ + + G PN+ TWE+ S+ ++ + A
Sbjct: 551 RPSDDSRIGNLLISWYLKKGKSDKVFSFFKHMSEGGGCPNSTTWELLSEGHIAEKRVSEA 610
Query: 389 VDCLEKAIDTGRGDGGKWVP 408
+ CLEKA T D W P
Sbjct: 611 LSCLEKAFMT--SDSKSWKP 628
>gi|22165052|gb|AAM93669.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432900|gb|AAP54476.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125575303|gb|EAZ16587.1| hypothetical protein OsJ_32059 [Oryza sativa Japonica Group]
Length = 545
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 144/466 (30%), Positives = 253/466 (54%), Gaps = 14/466 (3%)
Query: 27 DRLFKKGSSDVSVRQQLNQFLKS-----KKRVFKWEVGDTLKKLRDRKLYYPALKLSENM 81
D LF++ ++ R L+ L+ ++ + K E+ +K L R+ + AL+LS M
Sbjct: 81 DSLFRRVAAAADPRLPLSPVLEQWCLAEERPIAKPEIQSIIKYLCRRRRFSQALQLSMWM 140
Query: 82 EKR-GMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTE 140
+R ++ + D A L+L+ KV G+D A YF +P+ K YGSLL CY + E
Sbjct: 141 TERLHLHLSPGDVAYRLELITKVHGLDRAVEYFDSMPDQLKQQQCYGSLLKCYAEAKCVE 200
Query: 141 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 200
KAE L EKM+ + + SS +N +M LY + G E++ ++ + M+ S I+ D +T + +
Sbjct: 201 KAEELFEKMRGMGMA-SSYAYNVMMRLYLQDGQVERVHSMHRTMEESGIVADVFTTDTLV 259
Query: 201 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 260
A DI E+V+E+ + W +++ + + +++G+ E+A +A +E E + A
Sbjct: 260 AAYVVAEDIEAIEKVLEKADTCNDLMT-WHSYATIGKVLMQSGMEERALQAFQESEKKIA 318
Query: 261 HR-DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA-NISYLNMIQVLVNLKDLPGA 318
+ + AY FL+T+Y G SEV RIW + P +A N Y+ I VL+ + D+ GA
Sbjct: 319 KKSNRVAYGFLLTMYADLGMNSEVDRIWDVYKSKVPASACNSMYMCRISVLLKMNDIVGA 378
Query: 319 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 378
EK ++EWES +D R+ N+++ AY KEG +E AE L ++ ++G P TW +
Sbjct: 379 EKAYEEWESKHVYHDSRLINLLLTAYCKEGLMEKAEALVDQFVKKGRTPFGNTWYKLAGG 438
Query: 379 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 438
Y + G A D +KA+ +G +W P + + +F ++K+V+ AE +L++
Sbjct: 439 YFKVGQASKAADLTKKALASG---SNEWTPDLTNVLMSLNYFAEQKNVEAAEEMASLLQR 495
Query: 439 AVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 484
+ +++ L++TY AG+ +L R+K + +E E ++K+L
Sbjct: 496 LITPTR-DIYHGLLKTYVNAGKPVSDLLDRMKKDGMEADEETEKIL 540
>gi|115482784|ref|NP_001064985.1| Os10g0501300 [Oryza sativa Japonica Group]
gi|22165054|gb|AAM93671.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432901|gb|AAP54477.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113639594|dbj|BAF26899.1| Os10g0501300 [Oryza sativa Japonica Group]
Length = 513
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 145/443 (32%), Positives = 249/443 (56%), Gaps = 11/443 (2%)
Query: 46 FLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENM-EKRGMNKTVSDQAIHLDLVAKVQ 104
+L ++ V K E+ +K LR R + AL+LS M E+R ++ + D A L+L++KV
Sbjct: 73 WLAEERPVSKPELQSLVKYLRRRCRFSQALELSMWMTERRHLHLSPGDVAYRLELISKVH 132
Query: 105 GIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSL 164
G+D A YF +P + YGSLL CY + EKAE L E M+ + + +S +N++
Sbjct: 133 GLDKAVEYFDAVPNQLRELQCYGSLLRCYAEAERVEKAEELFENMRGMGMA-NSYAYNAM 191
Query: 165 MTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGR 224
M LY++ G E++ ++ + M+ I+PD +T + + A A V D+ E+V+E+ +
Sbjct: 192 MNLYSQIGQVERVDSMYKAMEEGGIVPDIFTIDNLVSAYADVEDVEAIEKVLEKASCNNL 251
Query: 225 VAADWTTFSNLASIYVEAGLFEKAERALKELENR-NAHRD-LSAYQFLITLYGQTGNLSE 282
++ W +F+ + ++++AG+ E+A +A +E E R A +D AY FL+T+Y SE
Sbjct: 252 MS--WHSFAIVGKVFMKAGMQERALQAFQESEKRITARKDGRVAYGFLLTMYADLQMDSE 309
Query: 283 VYRIWRSLRLAFPNTA-NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 341
V RIW R P +A N Y+ I VL+ + D+ GAEK ++EWES +D R+ N+++
Sbjct: 310 VDRIWDVYRSKVPASACNTMYMCRISVLLKMNDIVGAEKAYEEWESKHVYHDSRLINILL 369
Query: 342 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRG 401
AY KEG +E AE L ++ ++G + TW + Y + G + A D +KA+ +
Sbjct: 370 TAYCKEGLMEKAEALVDQFIKKGRTLFSNTWYKLAGGYFKVGQVSKAADLTKKALASA-- 427
Query: 402 DGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 461
+W P + + +F ++K+V+ AE +L++ V L +V+ L++TY AG
Sbjct: 428 -SNEWKPDLANVLMSINYFAEQKNVEAAEEMASLLQRLV-PLTRDVYHGLLKTYVNAGEP 485
Query: 462 SPVMLRRLKMEKVEVSEASKKLL 484
+ +L R+K + +E E + K+L
Sbjct: 486 ASDLLDRMKKDGIEADEETDKIL 508
>gi|356514762|ref|XP_003526072.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Glycine max]
Length = 492
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 131/463 (28%), Positives = 243/463 (52%), Gaps = 5/463 (1%)
Query: 25 LYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKR 84
LY R+ G +SV L+++++ V + +K LR R AL++SE M +
Sbjct: 34 LYSRISPLGDPSISVVPVLDEWIEEGNAVDGPHLHHIIKILRTRNRNTQALEVSEWMSSK 93
Query: 85 GMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEA 144
G+ + DQA+ LDL+ +V G+++AE Y L + K +G+LLNCY +E + +K+ +
Sbjct: 94 GLPISSRDQAVQLDLIGRVHGVESAERYLQSLSDGDKTWKVHGALLNCYVREGLVDKSLS 153
Query: 145 LLEKMKELNLGFSS-MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 203
L++KMK++ GF S + +N++M+LY +T EK+P ++++MK + P+ ++Y + + +
Sbjct: 154 LMQKMKDM--GFVSFLNYNNIMSLYTQTQQYEKVPGVLEQMKKDGVPPNIFSYRICINSY 211
Query: 204 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 263
D++ E+++EEM+R+ + DW T+S + + Y++A + EKA L + E + +
Sbjct: 212 CVRGDLANVEKLLEEMEREPHIGIDWITYSMVTNFYIKADMREKALVCLMKCEKKTHRGN 271
Query: 264 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 323
AY LI+ + + R W+ + N Y+ M+ LV L +L AEK
Sbjct: 272 TVAYNHLISHNAALRSKGGMMRAWKLQKANCKKQLNREYITMLGCLVKLGELDKAEKVLG 331
Query: 324 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
EWE T D RV N+++ Y + G +E AE L + G P +W I + Y+
Sbjct: 332 EWELSGNTCDFRVPNILLIGYCQRGLVEKAEALLRKMVAEGKTPIPNSWSIVASGYVAKE 391
Query: 384 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDL 443
+M+ A C+++A+ +W P + I + +D++ AE F+ K+V+ +
Sbjct: 392 NMEKAFQCMKEAVAV-HAQNKRWRPKVDVISSIFSWVTNNRDIEEAEDFVNSW-KSVNAM 449
Query: 444 GVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEA 486
++ L++ G+ +L +K + +E+ E K+ L +
Sbjct: 450 NRGMYLSLMKMCIRYGKHVDGILESMKADNIEIDEEIKETLNS 492
>gi|195613552|gb|ACG28606.1| tetratricopeptide-like helical [Zea mays]
gi|414870858|tpg|DAA49415.1| TPA: tetratricopeptide-like helical [Zea mays]
Length = 517
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 146/474 (30%), Positives = 248/474 (52%), Gaps = 10/474 (2%)
Query: 18 KKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKL 77
++HL + LY R+ G + + L Q+ + K+ + +KKL + + AL+L
Sbjct: 35 RQHLPDELYRRIMNVGRPSIPLSPVLEQWNQEGHTAKKFVIQAIVKKLVGLRRFAHALEL 94
Query: 78 SENM-EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKE 136
S M ++R ++ +V D A LDL++KV G++ A YF +P+ + YGSLL CY +
Sbjct: 95 SFWMTDRRHLHLSVGDVAYRLDLISKVHGLEKAVEYFGMVPKQLRKPQCYGSLLKCYVEA 154
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 196
+KAE KM+E+ + SS + +M LY +TG E++ A+ Q+M+ + PD+++
Sbjct: 155 KAVDKAEEHFAKMQEMGMT-SSYAYTWMMKLYLQTGQLERVHAMFQDMEEKGVKPDTFSV 213
Query: 197 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 256
+ A A D+ G +V+++ ++ W ++ AS+++++G+ A AL E E
Sbjct: 214 EAMLAAYIAAEDVQGVGKVLDKANPHEKLVT-WHGHASAASLFMKSGMQVGAVMALVEAE 272
Query: 257 NRNAHRDLS-AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDL 315
R + + AY FL+ Y + G +E RIW + P N Y++ + L+ D+
Sbjct: 273 RRISPKSSRIAYAFLLKTYTELGMHAEAGRIWSVYKSKVP-PCNTMYMSRLSALLRTNDI 331
Query: 316 PGAEKCFKEWESGCATY-DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 374
GAE KEWE+ Y D R+ NVM+ AY +EG +E A L + A ++G P A TW
Sbjct: 332 DGAEATLKEWETVPLRYHDFRLINVMVDAYCREGLVEKAVALVDGAIKKGRTPYANTWYK 391
Query: 375 FSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 434
+ + + G + AVD KA+D+ W P + + HF +KDV AE +
Sbjct: 392 LAGGFFKTGQVPEAVDMTRKALDSAT---PPWRPDLANVLMSLNHFVDQKDVGAAEEMVS 448
Query: 435 ILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAIC 488
L+K V L +V+ L++TY AG+ +L R+K + +E E ++++L C
Sbjct: 449 TLQKLV-PLTRDVYHCLLKTYVRAGKPPSDLLERMKEDGLEADEETERILAGEC 501
>gi|255545872|ref|XP_002513996.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547082|gb|EEF48579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 496
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 147/467 (31%), Positives = 246/467 (52%), Gaps = 11/467 (2%)
Query: 25 LYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENME-K 83
L +++ K S +++ L +++ + +V ++ L K Y AL++ ME +
Sbjct: 31 LKNQIMKLKSPGLNITSILQKWIDNGHKVTVSQLRYINGLLVKSKRYKHALEIFTWMETQ 90
Query: 84 RGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYG-SLLNCYCKELMTEKA 142
+ +VSD A+ L+L+ KV GI+ AE YF +P S +LL+ Y K KA
Sbjct: 91 KNFRMSVSDYALRLELIIKVNGIEEAEEYFNFIPHDSVTRKAASFALLHGYVKVKDVVKA 150
Query: 143 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 202
EAL+ K+ L L + PFN +M LY T EK+ +I +MK + I + +YN+WM +
Sbjct: 151 EALMMKLYNLGLIVNCYPFNEMMKLYMATSQYEKVALVIDQMKRNKIALNLLSYNLWMSS 210
Query: 203 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 262
V+ + E V +EM D V W+T + LA+IY +AG+ +KA ALK E +
Sbjct: 211 YGEVSKVVKVELVYKEMVNDDNVEVGWSTLATLANIYTKAGIVDKALLALKNAEKILSTS 270
Query: 263 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 322
L Y FL+T Y N V R+W + + +Y+ ++ LV + DL AEK F
Sbjct: 271 HLLGYFFLMTQYSSLKNKEGVQRLWEACKGVNGRITCANYMCVLSCLVKVGDLLEAEKVF 330
Query: 323 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 382
++WE C YDIRV+NV++GAY ++G + AE L RG PN KT EI + ++++
Sbjct: 331 RDWELNCRKYDIRVSNVLLGAYVRKGLMNKAESLHLHTLDRGGCPNYKTLEILMEGWVKS 390
Query: 383 GDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDD 442
M A+D + +AI + W PS I + H E+ ++ + A F+++ +
Sbjct: 391 QKMDKAIDAMTQAISM--LEHCHWRPSHGIIMSIAEHLERNRNFEDANHFIQV----IHH 444
Query: 443 LGVE---VFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEA 486
LGV +++ L+R + A R + +L+ ++ +K+E+ + + L++A
Sbjct: 445 LGVASLPLYKVLLRMHLHAQRAAFDILKMMEKDKIELDDETSALVQA 491
>gi|242039187|ref|XP_002466988.1| hypothetical protein SORBIDRAFT_01g017960 [Sorghum bicolor]
gi|241920842|gb|EER93986.1| hypothetical protein SORBIDRAFT_01g017960 [Sorghum bicolor]
Length = 510
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 146/469 (31%), Positives = 249/469 (53%), Gaps = 10/469 (2%)
Query: 18 KKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKL 77
++ L + LY R+ G + + L Q+ + V K+ + +KKL + + AL+L
Sbjct: 38 RQPLPDNLYRRIMNVGRPSIPLSPVLKQWDQEGHTVKKFVIQAIVKKLVGLRRFAHALEL 97
Query: 78 SENM-EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKE 136
S M ++R ++ T D A LDL++KV G++ A YF +P+ + YGSLL CY +
Sbjct: 98 SFWMTDRRHLHLTAGDVAYRLDLISKVHGLEKAVEYFGMVPKRLRMPQCYGSLLKCYVEA 157
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 196
+KAE KM+E+ + SS + S+M LY +TG E++ A+ Q+M+ + PD+++
Sbjct: 158 KAVDKAEEHFAKMQEMGMK-SSYTYTSMMKLYLETGQLERVHAMFQDMEEKGVKPDTFSV 216
Query: 197 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 256
+ A A D+ G +V+++ ++ W + AS+++++G+ +A AL E E
Sbjct: 217 ESMLAAYIAAEDVEGVGKVLDKANPHEKL-VKWHGQALAASLFMKSGMQVRAVMALLEAE 275
Query: 257 NRNAHRDLS-AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDL 315
R + + AY FL+ Y G EV RIW + P +N YL+ I L+ + D+
Sbjct: 276 RRISPKSSRIAYAFLLKTYTDLGMYPEVGRIWSVYKSKVP-PSNTMYLSRISALLKMNDI 334
Query: 316 PGAEKCFKEWESGCATY-DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 374
GAE KEWE+ Y D R+ N+M+ AY +EG +E A L + A ++G P A TW
Sbjct: 335 DGAEATLKEWETVSLRYHDFRLINLMVDAYCREGLVEKAVALVDDAIKKGRTPYANTWYK 394
Query: 375 FSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 434
+ + + G++ AVD KA+++ W P + + HF +KDV+ AE
Sbjct: 395 LAGGFFKTGEVSKAVDMTRKALESA---TPPWKPDLTNVLMSLEHFMNQKDVEAAEEIAS 451
Query: 435 ILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKL 483
+L+K + L EV+ L++TY AG+ +L R+K + +E E ++++
Sbjct: 452 MLQK-LGPLTKEVYHCLLKTYVRAGKPVSDLLERMKKDGLEADEETERM 499
>gi|15240937|ref|NP_198098.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214236|sp|Q3E911.1|PP400_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27460
gi|332006308|gb|AED93691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 491
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 139/451 (30%), Positives = 230/451 (50%), Gaps = 8/451 (1%)
Query: 29 LFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENME-KRGMN 87
+ +K SV L + + S V E+ K+L Y AL++ E ME ++ +
Sbjct: 44 ILRKNGPRRSVTSLLQERIDSGHAVSLSELRLISKRLIRSNRYDLALQMMEWMENQKDIE 103
Query: 88 KTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLT----YGSLLNCYCKELMTEKAE 143
+V D A+ LDL+ K G+ E YF L +S + Y LL Y K M ++AE
Sbjct: 104 FSVYDIALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLPLLRAYVKNKMVKEAE 163
Query: 144 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 203
AL+EK+ L + PFN +M LY +G EK+ ++ MK + I + +YN+WM A
Sbjct: 164 ALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYNLWMNAC 223
Query: 204 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 263
V+ ++ E V +EM D V W++ LA++Y+++G EKA L++ E +
Sbjct: 224 CEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSGFDEKARLVLEDAEKMLNRSN 283
Query: 264 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 323
Y FLITLY GN V R+W + + ++Y+ ++ LV DL AE+ F
Sbjct: 284 RLGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDLEEAERVFS 343
Query: 324 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
EWE+ C YD+RV+NV++GAY + G + AE L RG PN KTWEI + +++
Sbjct: 344 EWEAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPNYKTWEILMEGWVKCE 403
Query: 384 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDL 443
+M+ A+D + + R W PS + +FE+E+ ++ A ++ L + +
Sbjct: 404 NMEKAIDAMHQVFVLMR--RCHWRPSHNIVMAIAEYFEKEEKIEEATAYVRDLHR-LGLA 460
Query: 444 GVEVFEPLIRTYAAAGRTSPVMLRRLKMEKV 474
+ ++ L+R + A R + + +K++K+
Sbjct: 461 SLPLYRLLLRMHEHAKRPAYDIYEMMKLDKL 491
>gi|297832672|ref|XP_002884218.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330058|gb|EFH60477.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 491
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 132/416 (31%), Positives = 226/416 (54%), Gaps = 6/416 (1%)
Query: 23 EALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENM- 81
+ L R+ + G S+ + L+ +L V E+ +K LR + AL++S+ M
Sbjct: 39 DTLQRRVARAGDPSASIIRVLDGWLDQGHLVKTSELHGIIKMLRKFSRFSHALQISDWMS 98
Query: 82 EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEK 141
E R T D AI LDL+AKV G+ AE +F +P +N+ YG+LLNCY + + K
Sbjct: 99 EHRVHEITEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHK 158
Query: 142 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 201
AE + ++MKEL +P+N ++ LY +TG + +++EM+ ++ PD +T N +
Sbjct: 159 AEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDGTVKPDIFTVNTRLH 218
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR-NA 260
A +AV+D+ G E+ + + D + DW T+++ A+ Y++AGL EKA L++ E N
Sbjct: 219 AYSAVSDVEGMEKFLMRCEADTGLHLDWRTYADTANGYIKAGLTEKAIEMLRKSEQMVNP 278
Query: 261 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 320
+ AY+ L++ YG G EVYR+W SL N Y+++I L+ + D+ EK
Sbjct: 279 RKRKHAYEVLMSFYGAAGKKEEVYRLW-SLYKELDGFYNTGYISVISALLKMDDIEEVEK 337
Query: 321 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 380
+EWE+G + +DIR+ +++I Y K+G +E AEE+ ++ + TWE + Y
Sbjct: 338 IMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNMLVQKWRVEDTSTWERLALGYK 397
Query: 381 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 436
G+M+ AV+ ++AID + W P + + + + E +D++ L +L
Sbjct: 398 MAGEMEKAVEKWKRAIDVSKPG---WRPHQVVLMSCVDYLEGRRDMESLRKILRLL 450
>gi|15225409|ref|NP_179663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206559|sp|Q9SKU6.1|PP166_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g20710, mitochondrial; Flags: Precursor
gi|4454477|gb|AAD20924.1| hypothetical protein [Arabidopsis thaliana]
gi|51315392|gb|AAT99801.1| At2g20710 [Arabidopsis thaliana]
gi|330251965|gb|AEC07059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 490
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 131/416 (31%), Positives = 227/416 (54%), Gaps = 6/416 (1%)
Query: 23 EALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENM- 81
+ L R+ + G S+ + L+ +L V E+ +K LR + AL++S+ M
Sbjct: 38 DTLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMS 97
Query: 82 EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEK 141
E R + D AI LDL+AKV G+ AE +F +P +N+ YG+LLNCY + + K
Sbjct: 98 EHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHK 157
Query: 142 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 201
AE + ++MKEL +P+N ++ LY +TG + +++EM+ ++ PD +T N +
Sbjct: 158 AEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLH 217
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR-NA 260
A + V+D+ G E+ + + D + DW T+++ A+ Y++AGL EKA L++ E NA
Sbjct: 218 AYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNA 277
Query: 261 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 320
+ AY+ L++ YG G EVYR+W SL N Y+++I L+ + D+ EK
Sbjct: 278 QKRKHAYEVLMSFYGAAGKKEEVYRLW-SLYKELDGFYNTGYISVISALLKMDDIEEVEK 336
Query: 321 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 380
+EWE+G + +DIR+ +++I Y K+G +E AEE+ ++ + TWE + Y
Sbjct: 337 IMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYK 396
Query: 381 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 436
G M+ AV+ ++AI+ + W P + + + + E ++D++G L +L
Sbjct: 397 MAGKMEKAVEKWKRAIEVSKPG---WRPHQVVLMSCVDYLEGQRDMEGLRKILRLL 449
>gi|125575304|gb|EAZ16588.1| hypothetical protein OsJ_32060 [Oryza sativa Japonica Group]
Length = 475
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 136/416 (32%), Positives = 234/416 (56%), Gaps = 11/416 (2%)
Query: 73 PALKLSENM-EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLN 131
P + LS M E+R ++ + D A L+L++KV G+D A YF +P + YGSLL
Sbjct: 62 PGIPLSMWMTERRHLHLSPGDVAYRLELISKVHGLDKAVEYFDAVPNQLRELQCYGSLLR 121
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CY + EKAE L E M+ + + +S +N++M LY++ G E++ ++ + M+ I+P
Sbjct: 122 CYAEAERVEKAEELFENMRGMGMA-NSYAYNAMMNLYSQIGQVERVDSMYKAMEEGGIVP 180
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D +T + + A A V D+ E+V+E+ + ++ W +F+ + ++++AG+ E+A +A
Sbjct: 181 DIFTIDNLVSAYADVEDVEAIEKVLEKASCNNLMS--WHSFAIVGKVFMKAGMQERALQA 238
Query: 252 LKELENR-NAHRD-LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA-NISYLNMIQV 308
+E E R A +D AY FL+T+Y SEV RIW R P +A N Y+ I V
Sbjct: 239 FQESEKRITARKDGRVAYGFLLTMYADLQMDSEVDRIWDVYRSKVPASACNTMYMCRISV 298
Query: 309 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 368
L+ + D+ GAEK ++EWES +D R+ N+++ AY KEG +E AE L ++ ++G
Sbjct: 299 LLKMNDIVGAEKAYEEWESKHVYHDSRLINILLTAYCKEGLMEKAEALVDQFIKKGRTLF 358
Query: 369 AKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDG 428
+ TW + Y + G + A D +KA+ + + W P + + +F ++K+V+
Sbjct: 359 SNTWYKLAGGYFKVGQVSKAADLTKKALASASNE---WKPDLANVLMSINYFAEQKNVEA 415
Query: 429 AEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 484
AE +L++ V L +V+ L++TY AG + +L R+K + +E E + K+L
Sbjct: 416 AEEMASLLQRLV-PLTRDVYHGLLKTYVNAGEPASDLLDRMKKDGIEADEETDKIL 470
>gi|357140786|ref|XP_003571944.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Brachypodium distachyon]
Length = 497
Score = 224 bits (571), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 151/472 (31%), Positives = 248/472 (52%), Gaps = 12/472 (2%)
Query: 21 LEEALYDRLFKKGSSDVSVRQQLNQFLKSKKR-VFKWEVGDTLKKLRDRKLYYPALKLSE 79
L ++LY R+ + + L Q+ ++ R V K E+ +KKL + + AL++S
Sbjct: 33 LADSLYHRVAAVAIPRLQLTPVLEQWAFAEDRPVEKHELQAIIKKLIRLRRFSHALEMSM 92
Query: 80 NM-EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELM 138
M ++R D A L+L++KV G+ +A YF L + K YGSLL CY +
Sbjct: 93 WMTDRRYFPLKPGDVAYRLELISKVHGLKSAVEYFGGLSKEIKKSQCYGSLLKCYAEAKF 152
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
E+AE +M+E+ + SS P+N +M LY +TG EK+ + + M+ S I PD +T ++
Sbjct: 153 VEEAEKFFGEMQEMGM-MSSYPYNVMMKLYWETGQVEKVRTMYRAMEESGIKPDLFTIDI 211
Query: 199 WMRALAAVNDISGAERVIEEMK-RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 257
+ A D+ G E V+E+ K R+ V W +++ +AS +++AGL KA +AL+E E
Sbjct: 212 LLTVYKASGDLEGIEEVLEKAKPRENLVG--WHSYAIVASAFMKAGLQGKALQALQESEK 269
Query: 258 R-NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 316
R + AY FL+++ +G SEV RIW + P T N Y+ I L+ + D
Sbjct: 270 RIDPKNGRVAYGFLLSMCADSGMRSEVDRIWDVYKSKVP-TCNSMYMCRISALLKMNDTD 328
Query: 317 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 376
AEK F+EWES +D R+ N+++ Y EG +E AE L + A +G P A TW +
Sbjct: 329 EAEKAFREWESRFVHHDFRLINLLLNGYCAEGLMEKAEALVDEAITKGRMPYANTWYKLA 388
Query: 377 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 436
+ ++G + AVD KA+ + W P + + HF ++K+V+ AE +L
Sbjct: 389 AGFFKDGQVLKAVDLTRKALASATSG---WEPDLTNVLMSLDHFMEQKNVEAAEEMASLL 445
Query: 437 KKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAIC 488
+ V L +V+ L++TY AG +L R+ + E + + ++L +C
Sbjct: 446 RSLV-PLTRDVYHSLLKTYVHAGMPVSDLLDRMNEDGFEADQETDRILARLC 496
>gi|326531954|dbj|BAK01353.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 518
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 124/423 (29%), Positives = 225/423 (53%), Gaps = 5/423 (1%)
Query: 43 LNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVS-DQAIHLDLVA 101
++++ + + RV + ++ + +LR + Y AL++ M+ K + D A LDL+A
Sbjct: 67 IDRWAQERGRVSRPDLQRAVSQLRRARRYGHALEILSWMDSHKEIKLLPLDHAARLDLIA 126
Query: 102 KVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPF 161
KV G AE Y+ LP ++ LL+CY E +KAE+ + ++ + L F
Sbjct: 127 KVHGTSQAEEYYNKLPNSASREAASFPLLHCYVAERNVQKAESFMASLQSIGLPVDPHSF 186
Query: 162 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 221
N +M LY T EK+ ++I MK ++I ++ +YN+WM A +V+D++ + V +EM
Sbjct: 187 NEMMKLYVATCEYEKVFSVIDLMKRNNIPRNALSYNLWMNA-CSVSDVTSVQSVFKEMVN 245
Query: 222 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 281
DG + W+T+ LA+I+++ GL KA L+ E + + Y F++T Y G+
Sbjct: 246 DGTIEVGWSTYCTLANIFMKHGLNSKAFACLRTAETKLSTAQRLGYSFVMTCYAALGDSD 305
Query: 282 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 341
V R+W + + + +Y++ I L+ + D+ AE F WE C +D+RV+NV++
Sbjct: 306 GVMRLWEASKCVPGRIPSANYMSAILCLIKVGDIDRAEWIFGSWEVECRKHDVRVSNVLL 365
Query: 342 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRG 401
GAY + G +E AE+L +G PN KTWEI + ++++ M AV+ ++KA+ +
Sbjct: 366 GAYVRNGWIEKAEKLHLHMLEKGGRPNYKTWEILMEGFVQSRQMDKAVNAMKKALSLMK- 424
Query: 402 DGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 461
G W P + FE++ + D A ++++L+K + + +++ ++R Y A
Sbjct: 425 -GCHWRPPLRLVEAIATFFEEQGNTDDANRYIKVLQK-FNLTSLPLYKSVLRAYIKADTM 482
Query: 462 SPV 464
P
Sbjct: 483 LPT 485
>gi|255553777|ref|XP_002517929.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542911|gb|EEF44447.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 446
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 137/402 (34%), Positives = 220/402 (54%), Gaps = 7/402 (1%)
Query: 38 SVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKR-GMNKTVSDQAIH 96
SV L+Q++ V K + + ++ + AL++S+ M R + + SD +
Sbjct: 23 SVIPVLDQWVNEGNTVRKALLRSLVNLMKGFNRFNHALQISQWMADRPNLTLSPSDVVVR 82
Query: 97 LDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGF 156
L+LV ++ G AE YF LP+ K Y +LL+ Y +E KAEA++E+M+ +
Sbjct: 83 LELVHRIYGSAHAEKYFEKLPDKFKCREVYCALLSGYVQESSVRKAEAIMEEMRAKGMAN 142
Query: 157 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
S P+N L+ LY K G EKI +IQEM+ + ++ +YT + M A A ++ISG ER++
Sbjct: 143 SCFPYNLLINLYPKNGDYEKINMLIQEMETNGVVRGAYTMSNLMAAYVAASNISGMERIL 202
Query: 217 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN-RNAHRDLSAYQFLITLYG 275
++++D ++ DW +S AS Y++ GL EKA L++LE+ + SA+ L+TLYG
Sbjct: 203 NQIEKDPQLGNDWRVYSVAASGYLKFGLIEKALTMLRKLEDVMPLEKKTSAFDILVTLYG 262
Query: 276 QTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 335
+TG E+Y +W + + S + MI L L D+ GAEK F+EWES C YD R
Sbjct: 263 KTGKRDELYLVWNTYK-PLIELKETSVMTMISSLSKLDDIKGAEKIFREWESQCMMYDFR 321
Query: 336 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 395
V N ++ AY ++G L+ AE + P A +W I + Y+ + M AV+ L+KA
Sbjct: 322 VLNTLLFAYCRKGLLKKAEA-AVEKAAKDRTPCASSWGILAMGYIEHNQMYKAVEMLKKA 380
Query: 396 IDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 437
+ G W P+S T+ + E++ DV+G E ++LK
Sbjct: 381 LSIS---GQGWRPNSMTLTACLNFLEKQGDVEGVEEVTKLLK 419
>gi|449470082|ref|XP_004152747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Cucumis sativus]
Length = 439
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 127/349 (36%), Positives = 186/349 (53%), Gaps = 18/349 (5%)
Query: 34 SSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQ 93
+S +R+ + +F KSK+ E L + RD YPA +
Sbjct: 90 TSITKLRRVVKKFCKSKRFERALE-ALILMETRDNFRMYPA-----------------EH 131
Query: 94 AIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELN 153
A+ L+L K G+ AE YF LP + + LL+ Y KE TEKAEA + K+++
Sbjct: 132 ALRLELTIKAHGLLKAEEYFNQLPTIASQKASSLPLLHGYVKERNTEKAEAFMVKLRDSG 191
Query: 154 LGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAE 213
L + +N +M LY T EK+P +I++MK + I + +YN+WM A + + + E
Sbjct: 192 LVVNHHLYNEMMKLYVATYQNEKVPLVIKDMKQNQIPRNVLSYNLWMNACSELYGVGSIE 251
Query: 214 RVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITL 273
V EEM D V W+T LA++Y++ GL EKA ALKE E + + Y FLITL
Sbjct: 252 LVFEEMLTDKNVQVGWSTMCTLANVYIQEGLVEKAFAALKEAEKKLSPCKRLGYFFLITL 311
Query: 274 YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYD 333
Y + V+R+WR+ + N +Y+ ++ LV L ++ AEK FKEWE C YD
Sbjct: 312 YASLKDKEGVFRVWRASKAVSGNPTCANYICILLCLVKLGEIDKAEKVFKEWELNCRNYD 371
Query: 334 IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 382
IRV+NV++GAY + G LE AE L RG +PN KTWEI + ++R+
Sbjct: 372 IRVSNVLLGAYVRNGLLEKAESLHRHTLGRGGNPNYKTWEILMEGWVRS 420
>gi|449515498|ref|XP_004164786.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Cucumis sativus]
Length = 439
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 127/349 (36%), Positives = 186/349 (53%), Gaps = 18/349 (5%)
Query: 34 SSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQ 93
+S +R+ + +F KSK+ E L + RD YPA +
Sbjct: 90 TSITKLRRVVKKFCKSKRYERALE-ALILMETRDNFRMYPA-----------------EH 131
Query: 94 AIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELN 153
A+ L+L K G+ AE YF LP + + LL+ Y KE TEKAEA + K+++
Sbjct: 132 ALRLELTIKAHGLLKAEEYFNQLPTIASQKASSLPLLHGYVKERNTEKAEAFMVKLRDSG 191
Query: 154 LGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAE 213
L + +N +M LY T EK+P +I++MK + I + +YN+WM A + + + E
Sbjct: 192 LVVNHHLYNEMMKLYVATYQNEKVPLVIKDMKQNLIPRNVLSYNLWMNACSELYGVGSIE 251
Query: 214 RVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITL 273
V EEM D V W+T LA++Y++ GL EKA ALKE E + + Y FLITL
Sbjct: 252 LVFEEMLTDKNVQVGWSTMCTLANVYIQEGLVEKAFAALKEAEKKLSPCKRLGYFFLITL 311
Query: 274 YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYD 333
Y + V+R+WR+ + N +Y+ ++ LV L ++ AEK FKEWE C YD
Sbjct: 312 YASLKDKEGVFRVWRASKAVSGNPTCANYICILLCLVKLGEIDKAEKVFKEWELNCRNYD 371
Query: 334 IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 382
IRV+NV++GAY + G LE AE L RG +PN KTWEI + ++R+
Sbjct: 372 IRVSNVLLGAYVRNGLLEKAESLHRHTLGRGGNPNYKTWEILMEGWVRS 420
>gi|224121664|ref|XP_002330622.1| predicted protein [Populus trichocarpa]
gi|222872226|gb|EEF09357.1| predicted protein [Populus trichocarpa]
Length = 378
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 125/339 (36%), Positives = 193/339 (56%), Gaps = 8/339 (2%)
Query: 83 KRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKA 142
+R T D A+ L L+ +V+G++ AENYF L K TYG++LN +E +KA
Sbjct: 4 RRFFTFTTEDAAVRLGLIHRVRGLEEAENYFNKLSVKLKTKYTYGAILNGCVREKSVQKA 63
Query: 143 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 202
EA++++M+E + SS P+N L+ LY++TG +KIP +++EM+ + I D YT + A
Sbjct: 64 EAVMQEMREGGMTTSSFPYNILIILYSQTGDFDKIPPLMKEMERNGIAEDKYTLRNLIAA 123
Query: 203 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 262
A +DISG ER+++ M+ + + DW ++ A Y++ G E A L++LE A R
Sbjct: 124 SVAASDISGVERILKLMEENPELGLDWKLYAMAADAYLKIGSIETALTMLEKLEKWMAFR 183
Query: 263 DLSA-YQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 321
A + FL++LY +TGN E+YRIW +L + + SY MI L L D+ GAEK
Sbjct: 184 KKKAVFNFLLSLYAKTGNKDELYRIW-NLYKPSSESMDTSYCCMIDSLTKLDDIEGAEKI 242
Query: 322 FKEWESGC-ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 380
F+EWES C TYD RV N ++ AY G E AE E+A +G P A TW + + Y+
Sbjct: 243 FEEWESQCTTTYDFRVLNGLLVAYCNRGLFEKAEAAIEKA-VQGRTPYASTWHVMAKGYM 301
Query: 381 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
+ + V+ L++A++ GR W P + T + +
Sbjct: 302 EHDQIPKTVEMLKRAVNVGR----DWKPDPILVNTCLEN 336
>gi|42570837|ref|NP_973492.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|119935915|gb|ABM06033.1| At2g20710 [Arabidopsis thaliana]
gi|330251966|gb|AEC07060.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 395
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 116/356 (32%), Positives = 199/356 (55%), Gaps = 5/356 (1%)
Query: 82 EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEK 141
E R + D AI LDL+AKV G+ AE +F +P +N+ YG+LLNCY + + K
Sbjct: 3 EHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHK 62
Query: 142 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 201
AE + ++MKEL +P+N ++ LY +TG + +++EM+ ++ PD +T N +
Sbjct: 63 AEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLH 122
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR-NA 260
A + V+D+ G E+ + + D + DW T+++ A+ Y++AGL EKA L++ E NA
Sbjct: 123 AYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNA 182
Query: 261 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 320
+ AY+ L++ YG G EVYR+W SL N Y+++I L+ + D+ EK
Sbjct: 183 QKRKHAYEVLMSFYGAAGKKEEVYRLW-SLYKELDGFYNTGYISVISALLKMDDIEEVEK 241
Query: 321 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 380
+EWE+G + +DIR+ +++I Y K+G +E AEE+ ++ + TWE + Y
Sbjct: 242 IMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYK 301
Query: 381 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 436
G M+ AV+ ++AI+ + W P + + + + E ++D++G L +L
Sbjct: 302 MAGKMEKAVEKWKRAIEVSKPG---WRPHQVVLMSCVDYLEGQRDMEGLRKILRLL 354
>gi|226533322|ref|NP_001142217.1| uncharacterized protein LOC100274385 [Zea mays]
gi|194707648|gb|ACF87908.1| unknown [Zea mays]
gi|414870857|tpg|DAA49414.1| TPA: hypothetical protein ZEAMMB73_857299 [Zea mays]
Length = 472
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 129/409 (31%), Positives = 217/409 (53%), Gaps = 9/409 (2%)
Query: 82 EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEK 141
++R ++ +V D A LDL++KV G++ A YF +P+ + YGSLL CY + +K
Sbjct: 55 DRRHLHLSVGDVAYRLDLISKVHGLEKAVEYFGMVPKQLRKPQCYGSLLKCYVEAKAVDK 114
Query: 142 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 201
AE KM+E+ + SS + +M LY +TG E++ A+ Q+M+ + PD+++ +
Sbjct: 115 AEEHFAKMQEMGMT-SSYAYTWMMKLYLQTGQLERVHAMFQDMEEKGVKPDTFSVEAMLA 173
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 261
A A D+ G +V+++ ++ W ++ AS+++++G+ A AL E E R +
Sbjct: 174 AYIAAEDVQGVGKVLDKANPHEKLVT-WHGHASAASLFMKSGMQVGAVMALVEAERRISP 232
Query: 262 RDLS-AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 320
+ AY FL+ Y + G +E RIW + P N Y++ + L+ D+ GAE
Sbjct: 233 KSSRIAYAFLLKTYTELGMHAEAGRIWSVYKSKVP-PCNTMYMSRLSALLRTNDIDGAEA 291
Query: 321 CFKEWESGCATY-DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 379
KEWE+ Y D R+ NVM+ AY +EG +E A L + A ++G P A TW + +
Sbjct: 292 TLKEWETVPLRYHDFRLINVMVDAYCREGLVEKAVALVDGAIKKGRTPYANTWYKLAGGF 351
Query: 380 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 439
+ G + AVD KA+D+ W P + + HF +KDV AE + L+K
Sbjct: 352 FKTGQVPEAVDMTRKALDSAT---PPWRPDLANVLMSLNHFVDQKDVGAAEEMVSTLQKL 408
Query: 440 VDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAIC 488
V L +V+ L++TY AG+ +L R+K + +E E ++++L C
Sbjct: 409 V-PLTRDVYHCLLKTYVRAGKPPSDLLERMKEDGLEADEETERILAGEC 456
>gi|357137419|ref|XP_003570298.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Brachypodium distachyon]
Length = 513
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 128/449 (28%), Positives = 231/449 (51%), Gaps = 6/449 (1%)
Query: 38 SVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKR-GMNKTVSDQAIH 96
+V + ++ + + V + ++ + +LR + Y AL++ M+ R +N + D A
Sbjct: 57 AVAAAIERWAQERGHVSRPDLRRAVSQLRRARRYDHALEILSWMDSRKDLNLSPLDHAAR 116
Query: 97 LDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGF 156
LDL+AKV G AE Y+ L + LL+CY E +KAE+ + ++ + L
Sbjct: 117 LDLIAKVHGTCHAEEYYKKLRNAACREAASFPLLHCYVAERNVQKAESFMASLQSIGLPV 176
Query: 157 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
FN ++ LY T EK A+I MK S+I + +YN+WM A + + ++ + V
Sbjct: 177 DPHSFNEMLKLYVATCQFEKALAVIDLMKRSNIPRNVLSYNLWMNACSVLG-VASVQSVF 235
Query: 217 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 276
+EM DG V W+TF LA+I+++ GL KA L+ E + + R Y F++T Y +
Sbjct: 236 KEMVNDGTVEVGWSTFCTLANIFIKHGLNSKALACLRTAETKLSPRQRLGYSFVMTCYAR 295
Query: 277 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCA-TYDIR 335
+ V R+W + + + +Y++ I + + D+ AE F WE+ C D+R
Sbjct: 296 LDDSDGVMRLWEASKSVPGRIPSANYMSTIICSIKVGDIAQAEWIFGSWEAECGRKNDVR 355
Query: 336 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 395
V+NV++GAY + G +E AE L +GA PN KTWEI + ++++ M AV+ ++KA
Sbjct: 356 VSNVLLGAYVRNGWIEKAERLHLHMLEKGAHPNYKTWEILLEGFVQSRQMDKAVNAIKKA 415
Query: 396 IDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 455
+ + W P E + FE+ +VD A ++++L+K + + +++ ++R Y
Sbjct: 416 LSLSK--SCHWRPPLELVEAIATFFEEHGNVDDANRYIKVLQK-FNLTSLPLYKSVLRAY 472
Query: 456 AAAGRTSPVMLRRLKMEKVEVSEASKKLL 484
A P + + +++ + E +L+
Sbjct: 473 IKADAVPPNISEMIARDQIIMDEEMDRLI 501
>gi|388517969|gb|AFK47046.1| unknown [Lotus japonicus]
Length = 496
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 136/426 (31%), Positives = 230/426 (53%), Gaps = 10/426 (2%)
Query: 24 ALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENME- 82
AL R+ K G + LNQ+++ + + ++ + +L + + AL++SE M
Sbjct: 35 ALETRVLKSGDPRTPMAPILNQWVEGGGDITQIQLQRLITRLAYFRRFTHALQVSEWMSN 94
Query: 83 KRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKA 142
+R + + A + L++KV G+ AE++F +P+ + Y SLL+CY + E+A
Sbjct: 95 ERNYDLSSGLIAKRIHLISKVHGLKKAEDFFQGIPDDKRGFKIYASLLSCYAEHKSLEEA 154
Query: 143 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 202
EA+++K+KEL ++ +N L+ LYA+ G EK+ ++QEMK + + + T+ + + A
Sbjct: 155 EAIMKKIKELRPMHLTVCYNILLKLYAQKGKYEKLDRLMQEMKENDLC-NGATFTIRLNA 213
Query: 203 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 262
A D+ G E+++ +M+ D DW T+S A+ Y++AG EKA ALK+ E +
Sbjct: 214 YVAAKDVEGMEKLLMQMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGK 273
Query: 263 DLS-AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 321
L AY+ L + Y GN EVYR+W ++ N N SY+ M+ L+ L D GAEK
Sbjct: 274 KLRLAYESLQSTYAAIGNKDEVYRLWNRIK-NLQNCWNSSYICMLSSLLKLDDFDGAEKI 332
Query: 322 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 381
EWES +D R+ N+MI AY K G L+ AE ++ G + +W+ + Y
Sbjct: 333 LAEWESEHKNFDTRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHM 392
Query: 382 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVD 441
+ DM+ AV ++KAI R W PS T+ + + +++ D++ A LEILK +
Sbjct: 393 DNDMEKAVQTMKKAILANRPG---WRPSPSTLVACITYLKEKLDLESA---LEILKLCKE 446
Query: 442 DLGVEV 447
D +++
Sbjct: 447 DGHIKI 452
>gi|242066836|ref|XP_002454707.1| hypothetical protein SORBIDRAFT_04g035970 [Sorghum bicolor]
gi|241934538|gb|EES07683.1| hypothetical protein SORBIDRAFT_04g035970 [Sorghum bicolor]
Length = 527
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 124/443 (27%), Positives = 221/443 (49%), Gaps = 4/443 (0%)
Query: 43 LNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEK-RGMNKTVSDQAIHLDLVA 101
++++ + + + E+ + LR + Y AL++ ME + + D A LDL+A
Sbjct: 76 IDRWARESVHISQPELRRAIAMLRRARRYEHALEIFSWMESCNSVLLSSWDHAARLDLIA 135
Query: 102 KVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPF 161
K G AE Y+ L + LL+CY E +KAE + +++ L F
Sbjct: 136 KAYGTSQAEEYYNKLQSPAARQAASFPLLHCYVTERNVQKAETFMAQLQSCGLPVDPHSF 195
Query: 162 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 221
N +M LY T EK ++I MK ++I + +YN+WM A V+ ++ + V +EM
Sbjct: 196 NEIMKLYIATFQYEKALSVIDLMKRNNIPRNVLSYNLWMNVCAEVSGVAPVQSVFQEMLN 255
Query: 222 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 281
D V W+T+ LA+I+ + GL KA+ L++ E + + Y F++T Y +
Sbjct: 256 DETVEVGWSTYCTLANIFRKNGLNTKAQACLRKAETKLSPTGRLGYSFVMTCYAALNDSD 315
Query: 282 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 341
V R+W + + +Y+ + + + D+ AE F WE+GC +D+RV+NV++
Sbjct: 316 GVMRLWEASKSVPGRIPAANYMTAMLCSIKVGDISQAEWIFGSWEAGCRKHDVRVSNVLL 375
Query: 342 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRG 401
GAY + +E AE L +GA PN KTWEI + Y+++ M AV C++K + +
Sbjct: 376 GAYVRNRWIEKAERLHLHMLEKGARPNYKTWEILMEGYVQSRQMDKAVGCMKKGLSLLK- 434
Query: 402 DGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 461
W P E + +HFE++ D A ++++L++ + + +++ LIR Y A
Sbjct: 435 -SCHWRPPLELMEAIGKHFEEQGSADDAYRYIKVLQR-FNLTSLPLYKSLIRAYINADIV 492
Query: 462 SPVMLRRLKMEKVEVSEASKKLL 484
P +L + +++ E +L+
Sbjct: 493 PPNILEMIAKDQIVTDEEMDRLI 515
>gi|297808773|ref|XP_002872270.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318107|gb|EFH48529.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 492
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 138/458 (30%), Positives = 235/458 (51%), Gaps = 14/458 (3%)
Query: 29 LFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENME-KRGMN 87
+ +K SV L + + S V E+ K+L Y AL++ E ME ++ +
Sbjct: 41 ILRKNGPRRSVTSLLQERIDSGHAVALSELRFISKRLIRSNRYDLALQMIEWMENQKEIQ 100
Query: 88 KTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKN----HLTYGSLLNCYCKELMTEKAE 143
+V D ++ L+L+ K G+ AE YF L +S + Y LL Y K+ M ++ E
Sbjct: 101 FSVYDISLRLELIIKTHGLKQAEEYFEKLLNSSASLRVAKSAYLPLLRSYVKKKMVKEGE 160
Query: 144 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 203
+EK+ L + PFN +M LY +G EK+ ++ MK + I + +YN+WM A
Sbjct: 161 VFMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKVNKIPRNVLSYNLWMNAC 220
Query: 204 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 263
V+ ++ E V EM D V W++ LA++Y++ G EKA+ L+ E +
Sbjct: 221 CQVSGVTAVETVYREMVGDKSVEVGWSSLCTLANVYIKGGFDEKAKLVLENAEKLLNRSN 280
Query: 264 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 323
Y FLITLY G+ V R+W + +L + +Y+ ++ LV + DL AE+ F
Sbjct: 281 RLGYFFLITLYASLGDKEGVVRLWEASKLVCGRISCANYICVLSSLVKIGDLEEAERVFN 340
Query: 324 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
EWE+ C YD+RV+NV++GAY + G + AE L R RG +PN KTWEI + +++
Sbjct: 341 EWEAQCFNYDVRVSNVLLGAYMRNGEIRKAESLHARVLERGGNPNYKTWEILMEGWVKCQ 400
Query: 384 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDL 443
M+ A+ + +A + + G W PS + ++FE+E+ ++ A ++ + + L
Sbjct: 401 SMEKAIVAMHRAFELMK--GCHWRPSESIVMAIAKYFEEEEKIEEANTYI----RDLHHL 454
Query: 444 GVE---VFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSE 478
G+ ++ L+R A R + + +K++K+ + E
Sbjct: 455 GLASLPLYRLLLRMQEHAQRPAFDIYEMMKLDKIGIDE 492
>gi|115436130|ref|NP_001042823.1| Os01g0301500 [Oryza sativa Japonica Group]
gi|57899055|dbj|BAD87829.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113532354|dbj|BAF04737.1| Os01g0301500 [Oryza sativa Japonica Group]
gi|222618277|gb|EEE54409.1| hypothetical protein OsJ_01440 [Oryza sativa Japonica Group]
Length = 484
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 130/362 (35%), Positives = 196/362 (54%), Gaps = 10/362 (2%)
Query: 74 ALKLSENM-EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK--NHLTYGSLL 130
AL+L + M +GM+ T + A+HL+L+ V GI+AAE YF +P ++ NH TYG+LL
Sbjct: 99 ALELMDWMVNTKGMSMTYARYALHLELLYSVYGIEAAEEYFSGIPSFTRDQNHRTYGALL 158
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
NCYC M EKA + +M EL + S+ N+LM LY + G K+ + EMK ++
Sbjct: 159 NCYCSAKMEEKATNIYRRMDELGIPSSTKLMNNLMGLYLELGQHSKVANLFDEMKERNVQ 218
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
PD T + MR+ AA N I + M V W+ F L SIY+ AG+ E+AE
Sbjct: 219 PDELTCCILMRSHAAHNKIDTVKETFYNMSLLD-VPKQWSIFRTLGSIYMNAGMVEEAEL 277
Query: 251 A-LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP-NTANISYLNMIQV 308
A ++ E + FL+ + GNL V R+W+ +++ F N N SYL M+Q
Sbjct: 278 AFMRAQEFLGFDHGRHPFYFLMRQFASIGNLRGVNRVWKDIKMTFSYNRTNFSYLLMLQC 337
Query: 309 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 368
L L D ++ +KEWE YD R+TN++ A+ + G AE L E+ + RG D +
Sbjct: 338 LYKLGDTDRMKEIYKEWEYRYENYDPRLTNMLTRAHLRNGMTNEAELLWEKVKERGGDFD 397
Query: 369 AKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDG 428
+T E+F ++YL GD A+ EK + G + ET + F++ FE++K V+G
Sbjct: 398 FETCELFREHYLGKGDTTSALKWAEKMTKLPKKQGKQ---DQETCK-FLKWFEEDKVVEG 453
Query: 429 AE 430
A+
Sbjct: 454 AK 455
>gi|226502666|ref|NP_001140872.1| uncharacterized protein LOC100272948 [Zea mays]
gi|194701536|gb|ACF84852.1| unknown [Zea mays]
gi|413924212|gb|AFW64144.1| hypothetical protein ZEAMMB73_253479 [Zea mays]
Length = 525
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 124/443 (27%), Positives = 221/443 (49%), Gaps = 4/443 (0%)
Query: 43 LNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVS-DQAIHLDLVA 101
+ ++ + + V + E+ + LR + Y AL++ ME + S D A LDL+A
Sbjct: 74 VERWAQDRVHVSQPELRRAIGMLRRERRYEQALEIFSWMESCSSLRLSSWDHAARLDLIA 133
Query: 102 KVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPF 161
K AE Y+ L + LL+CY E +KAE + +++ L F
Sbjct: 134 KAYSTSQAEEYYNKLQSPATRQAASFPLLHCYVMERDVQKAETFMAQLQSHGLPVDPHSF 193
Query: 162 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 221
N +M LY T EK+ ++I MK ++I + +YN+WM A A V+ + + V + M
Sbjct: 194 NEIMKLYVATCQYEKVLSVIDLMKRNNIHRNVLSYNLWMNACAEVSGVDSVQSVFQVMLN 253
Query: 222 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 281
D V W+T+ LA+I+ + GL +A+ L + E + + Y F++T Y +
Sbjct: 254 DETVKVGWSTYCTLANIFRKNGLNNEAQACLVKAEAKLSPAGRLGYSFVMTCYAALNDSD 313
Query: 282 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 341
V R+W + + Y+ + + + D+ AE F +WE+GC +D+RV+NV++
Sbjct: 314 GVMRMWEASKSVPGRIPTAYYMAAMSCSIKVGDISQAECIFGKWEAGCRKHDVRVSNVLL 373
Query: 342 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRG 401
GAY + +E AE L +GA PN KTWEI + Y+++ M AV C++K + +
Sbjct: 374 GAYVRNRWIEKAERLHLHMLEKGACPNYKTWEILMEGYVQSRQMDKAVGCMKKGLSLLK- 432
Query: 402 DGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 461
W P E + +HFE++ D A ++++L++ + + +++ LIR Y A
Sbjct: 433 -SCHWRPPVELMEAIGKHFEEQGSADDAYRYIKVLQR-FNLTSLPLYKSLIRAYINADVV 490
Query: 462 SPVMLRRLKMEKVEVSEASKKLL 484
P +L + +++++ E +L+
Sbjct: 491 PPNVLEMIAKDQIDMDEEMDRLI 513
>gi|218188053|gb|EEC70480.1| hypothetical protein OsI_01546 [Oryza sativa Indica Group]
Length = 484
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 129/362 (35%), Positives = 195/362 (53%), Gaps = 10/362 (2%)
Query: 74 ALKLSENM-EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK--NHLTYGSLL 130
AL+L + M +GM+ T + A+HL+L+ V GI+AAE YF +P ++ NH TYG+LL
Sbjct: 99 ALELMDWMVNTKGMSMTYARYALHLELLYSVYGIEAAEEYFSGIPSFTRDQNHRTYGALL 158
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
NCYC M EKA + +M EL + S+ N+LM LY + G K + EMK ++
Sbjct: 159 NCYCSAKMEEKATNIYRRMDELGIPSSTKLMNNLMGLYLELGQHSKAANLFDEMKERNVQ 218
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
PD T + MR+ AA N I + M V W+ F L SIY+ AG+ E+AE
Sbjct: 219 PDELTCCILMRSHAAHNKIDTVKETFYNMSLLD-VPKQWSIFRTLGSIYMNAGMVEEAEL 277
Query: 251 A-LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP-NTANISYLNMIQV 308
A ++ E + FL+ + G+L V R+W+ +++ F N N SYL M+Q
Sbjct: 278 AFMRAQEFLGFDHGRHPFYFLMRQFASIGSLRGVNRVWKDIKMTFSYNRTNFSYLLMLQC 337
Query: 309 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 368
L L D ++ +KEWE YD R+TN++ A+ + G AE L E+ + RG D +
Sbjct: 338 LYKLGDTDRMKEIYKEWEYRYENYDPRLTNMLTRAHLRNGMTNEAELLWEKVKERGGDFD 397
Query: 369 AKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDG 428
+T E+F ++YL GD A+ EK + G + ET + F++ FE++K V+G
Sbjct: 398 FETCELFREHYLGKGDTTSALKWAEKMTKLPKKQGKQ---DQETCK-FLKWFEEDKVVEG 453
Query: 429 AE 430
A+
Sbjct: 454 AK 455
>gi|356542147|ref|XP_003539532.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Glycine max]
Length = 483
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 137/427 (32%), Positives = 230/427 (53%), Gaps = 13/427 (3%)
Query: 24 ALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENME- 82
+L +R+FK G + V L Q+++ + V K ++ + + +L + + AL++ E M
Sbjct: 23 SLENRVFKVGDPVIPVSPILKQWVEEGREVTKLQLENLVYRLTQSRRFTHALQVLEWMSN 82
Query: 83 KRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKA 142
+R + + A ++L++KV+G++ AE YF +P+ Y +LL CY + E+A
Sbjct: 83 ERNYELSPGNIAKQINLISKVRGLEQAEKYFRGIPDAKIEFKIYAALLRCYAEHKSVEEA 142
Query: 143 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 202
EA+L+K+KEL+ + N ++ LYAK G EK+ ++QEMK I ++ TY + + A
Sbjct: 143 EAVLKKIKELHPVNITACCNMMLELYAKKGKYEKLDRLMQEMKEKDIC-NAGTYTIRLNA 201
Query: 203 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN--RNA 260
DI G E+++ +M+ D DW T+ A+ Y + FEK LK+ E+ R
Sbjct: 202 YVIATDIKGMEKLLMQMEVDPMATVDWYTYMTAANGYRKVHNFEKVAAMLKKSEHVARGK 261
Query: 261 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 320
+ L AY+ + T+Y GN EV+R+W P N SY+ M+ LV L D+ GAEK
Sbjct: 262 TKRL-AYESIQTMYAIIGNKDEVHRLWN--MCTSPKKPNKSYIRMLSSLVKLDDIDGAEK 318
Query: 321 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 380
+EWES +D+R+ N+MI AY K G+ + AE R G + +TW+ + Y
Sbjct: 319 ILEEWESVHENFDVRIPNLMISAYCKWGQFDKAEAYIRRLLDGGKHLDGRTWDRLACGYN 378
Query: 381 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 440
DM+ AV ++KA+ T G + P T+ +++ +++ D+D A LEILK +
Sbjct: 379 AGNDMENAVQAMKKAVSTNLA-GRR--PDPFTLVACVKYLKEKGDLDLA---LEILKLCI 432
Query: 441 DDLGVEV 447
++ + V
Sbjct: 433 ENSHISV 439
>gi|356547012|ref|XP_003541912.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20710, mitochondrial-like [Glycine max]
Length = 482
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 141/428 (32%), Positives = 228/428 (53%), Gaps = 14/428 (3%)
Query: 24 ALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENME- 82
+L + +FK G SV LNQ+++ + V K ++ D +L + + AL++ E M
Sbjct: 23 SLENGVFKNGDPLSSVSPILNQWVEEGREVTKLQLEDLAYRLTQSRRFTHALQVLEWMSN 82
Query: 83 KRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKA 142
+R + A ++L++KV G++ AE YF +P+ Y +LL CY + E+A
Sbjct: 83 ERNYELSPGSIAKQINLISKVHGLEQAERYFRGIPDDKIEFKIYAALLRCYAEHKSVEEA 142
Query: 143 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 202
EA+++ +KEL+ + N ++ LYAK G EK+ ++QEMK I S TY + + A
Sbjct: 143 EAVMKXIKELHPVNITPCCNMMLELYAKKGKYEKLDRLMQEMKEKDICNAS-TYTIRLNA 201
Query: 203 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN--RNA 260
V DI G E+++ +M+ D DW T+ A+ Y FEK LK+ E+ R
Sbjct: 202 YVVVTDIKGMEKLLMQMEADPVATVDWYTYMTAANGYRRVHNFEKVAEMLKKSEHLARGN 261
Query: 261 HRDLSAYQFLITLYGQTGNLSEVYRIWR-SLRLAFPNTANISYLNMIQVLVNLKDLPGAE 319
R L A++ + T+Y GN EVYR+W L PN N SY+ M+ L L ++ GAE
Sbjct: 262 TRRL-AFESIQTMYAIIGNKDEVYRLWNMCTSLKKPN--NSSYIRMLSSLAKLDEIDGAE 318
Query: 320 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 379
K +EWES A +D+R+ N+MI AY K G+ + AE R G + +TW+ + Y
Sbjct: 319 KILEEWESKYANFDVRIPNLMISAYCKWGQFDKAEAYIRRLLDGGKQLDGRTWDRLACGY 378
Query: 380 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 439
DM+ AV ++KA+ + GG+ P T+ +++ +++ D+D A LEILK
Sbjct: 379 KAGNDMEKAVQAMKKAV--SKNLGGR-RPDPFTLVACVKYLKEKGDLDLA---LEILKLC 432
Query: 440 VDDLGVEV 447
+++ + V
Sbjct: 433 IENSHISV 440
>gi|359497206|ref|XP_002262853.2| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Vitis vinifera]
Length = 494
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 120/383 (31%), Positives = 208/383 (54%), Gaps = 7/383 (1%)
Query: 82 EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEK 141
+KR + D A+ ++L+ KV G++ ENYF ++ + K + Y +LLNCY E +K
Sbjct: 108 DKRYIPLMPRDIALRMNLILKVHGLEQVENYFNNIHKNLKTYQVYIALLNCYALEKSVDK 167
Query: 142 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 201
AEA+++++++L +++ +N+LM +Y + G+ EK+ ++ EM+ I D +T + +
Sbjct: 168 AEAIMQRLRDLGFVRTALGYNTLMNVYYRMGNWEKLDILMHEMEEKGIFCDKFTLAIRLS 227
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR-NA 260
A AA ++I G + ++ M+ D R+ DW +++ +A Y++ GL +K +K+LE +A
Sbjct: 228 AYAAASNIVGIDNIVTRMESDPRIILDWNSYAVVAHGYLKVGLVDKTLVMMKKLEELIDA 287
Query: 261 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 320
A+ L+ LY +T E+ R+W L N Y+ MI L+ D+ AEK
Sbjct: 288 KGSNVAFDNLLKLYAETRQRDELDRVW-MLYKKKEKIYNKGYMAMISSLLKFDDIDAAEK 346
Query: 321 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 380
+EWES +YD RV N +I AY ++G E AE L + +G +P TW ++ YL
Sbjct: 347 VLEEWESRRLSYDFRVPNFLIDAYCRKGLTEKAEALVNKILTKGGNPLVDTWFYLANGYL 406
Query: 381 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 440
+ + AV+ L+KA+ + W PS T+ T + + E +DV+GA F+ L+
Sbjct: 407 EDSQIPKAVEALKKAVVVCPPN---WKPSKNTLATCLEYLEGNRDVEGAGEFIRFLQNE- 462
Query: 441 DDLGVEVFEPLIRTYAAAGRTSP 463
V V + L+ +Y G+ P
Sbjct: 463 GIFSVGVCKRLL-SYIENGKPQP 484
>gi|449523946|ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 461
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 216/381 (56%), Gaps = 11/381 (2%)
Query: 21 LEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSEN 80
+++ LY R+ G ++SV L+Q++ + V + E+ +K+LR K + AL++S+
Sbjct: 27 VKDNLYRRISPVGDPNISVTPLLDQWVLEGRLVQQDELRHIIKELRVYKRFKHALEISKW 86
Query: 81 M-EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMT 139
M +KR + +D AI ++L+ +V G++ E+YF ++P K + + +LLNCY E
Sbjct: 87 MSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYFDNMPSQLKRYQVHIALLNCYAHEKCV 146
Query: 140 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 199
+KA A ++K+KE+ S +P+N +M LY + G E++ ++++EMK + D +TY++
Sbjct: 147 DKANAFMQKIKEMGFANSPLPYNIMMNLYHQIGEFERLDSLLKEMKERGVYYDRFTYSIR 206
Query: 200 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN-- 257
+ A AA +D G E+++E+M+ + + DW + A+ Y + GL +K+ LK+ E
Sbjct: 207 ISAYAAASDFRGIEKIMEQMESNPSIVLDWNCYVIAANAYNKVGLIDKSISMLKKSEGLL 266
Query: 258 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 317
N + A+ + LY + G E++RIW + N +++MI L+ L D+ G
Sbjct: 267 ANVKKKGFAFNVYLKLYARNGKKDEIHRIWNLYKKE--KIFNKGFISMITSLLILDDIKG 324
Query: 318 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER---ARRRGADPNAKTWEI 374
AE+ +KEWE+ +YD+R+ N+++ AY + G +E AE L RR+ + ++W
Sbjct: 325 AERIYKEWETRKLSYDLRIPNLLVDAYCRAGLMEKAEVLLNEMVIVRRKFS---VESWCY 381
Query: 375 FSDYYLRNGDMKLAVDCLEKA 395
+ YL+ + AV+ L+ A
Sbjct: 382 LASGYLQKDQLPQAVETLKLA 402
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 93/220 (42%), Gaps = 5/220 (2%)
Query: 131 NCYCKELMTEKAEALLEKMKEL--NLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS 188
N Y K + +K+ ++L+K + L N+ FN + LYA+ G ++I I K
Sbjct: 244 NAYNKVGLIDKSISMLKKSEGLLANVKKKGFAFNVYLKLYARNGKKDEIHRIWNLYKKEK 303
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
I + + +L ++DI GAER+ +E + +++ D + L Y AGL EKA
Sbjct: 304 IFNKGFISMI--TSLLILDDIKGAERIYKEWE-TRKLSYDLRIPNLLVDAYCRAGLMEKA 360
Query: 249 ERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQV 308
E L E+ + ++ +L + Y Q L + + P+ N +
Sbjct: 361 EVLLNEMVIVRRKFSVESWCYLASGYLQKDQLPQAVETLKLAASVCPSRLNYVKEILAAF 420
Query: 309 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEG 348
L +D+ EK ++ R + ++GA E
Sbjct: 421 LDGKQDVEETEKVVNLLREKDDSHPARAHDYIVGAIMTES 460
>gi|356518447|ref|XP_003527890.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Glycine max]
Length = 496
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 128/451 (28%), Positives = 234/451 (51%), Gaps = 12/451 (2%)
Query: 43 LNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENME-KRGMNKTVSDQAIHLDLVA 101
L ++ V +++ + L K Y+ AL++ E ++ ++ + +D A+ L+L+
Sbjct: 50 LQNWVDQGNDVSPFQLRSIARTLVKSKRYHHALEVFEWIKNQKNFHMIPADHAMKLELII 109
Query: 102 KVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPF 161
+ G+ AE YF++LP+++ LL Y ++ T KAE + K+ EL L S PF
Sbjct: 110 ENHGLMEAEEYFMNLPDSAAKKAACLILLRGYVRDRDTSKAETFMLKLYELGLVVSPHPF 169
Query: 162 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVND--ISGAERVIEEM 219
N +M LY T K+P +IQ+MK + I + +YN+WM A + ++ E V +M
Sbjct: 170 NEMMKLYLVTCEYRKVPLVIQQMKRNKIPCNVLSYNLWMNACSEEEGYVVAAVETVFRQM 229
Query: 220 KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGN 279
D V W + + LA+ Y +AG +KA LK+ E + + + + FLITLY +
Sbjct: 230 LNDRNVEVGWGSLATLANAYKKAGQSKKAILVLKDAEKKLSTCNRLGHFFLITLYASLKD 289
Query: 280 LSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
V R+W + + + +Y+ ++ LV L D+ A++ F EWES C YDIRV+NV
Sbjct: 290 KEGVLRLWEASKAVRGRISCANYICILTCLVKLGDIVQAKRIFLEWESNCQKYDIRVSNV 349
Query: 340 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
++GAY + G +E AE L ++G PN KT EI + Y+ M A+ +++A+
Sbjct: 350 LLGAYVRNGLMEEAESLHLHTLQKGGCPNYKTLEILMEGYVNWQKMDEAIITMKRALAMM 409
Query: 400 RGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLG---VEVFEPLIRTYA 456
+ W P + + E++ +++ A+ ++ + +LG + +++ L+R +
Sbjct: 410 K--DCHWRPPHGIVLAIAEYLEKDGNLEYADKYI----TDIHNLGLVSLSLYKVLLRMHL 463
Query: 457 AAGRTSPVMLRRLKMEKVEVSEASKKLLEAI 487
+A + +L+ + +KVE+ + +L+A
Sbjct: 464 SANKPPFHILKMMDEDKVEIDNETLSILKAF 494
>gi|115449217|ref|NP_001048388.1| Os02g0796400 [Oryza sativa Japonica Group]
gi|47497029|dbj|BAD19082.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47497238|dbj|BAD19283.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537919|dbj|BAF10302.1| Os02g0796400 [Oryza sativa Japonica Group]
gi|125584008|gb|EAZ24939.1| hypothetical protein OsJ_08720 [Oryza sativa Japonica Group]
Length = 517
Score = 201 bits (510), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 111/394 (28%), Positives = 203/394 (51%), Gaps = 3/394 (0%)
Query: 91 SDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMK 150
SD + LDL+AKV G AE Y+ L + LL+CY E +KAE + +++
Sbjct: 118 SDHMVRLDLIAKVHGTSQAEEYYRKLSTAASKKAASFPLLHCYVTERNVQKAETFMAELQ 177
Query: 151 ELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDIS 210
L FN +M LY T EK+ ++I MK ++I + +YN+WM A A V+ ++
Sbjct: 178 RYGLPVDPHSFNEIMKLYVATCQYEKVLSVIYLMKRNNIPRNVLSYNIWMNACAEVSGLA 237
Query: 211 GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 270
+ +EM D V W+T+ LA+I+ + G KA L+ E + + Y F+
Sbjct: 238 SVQSAFKEMLNDDMVEVGWSTYCTLANIFKKYGQSSKALACLRTAETKLSSTGRLGYSFI 297
Query: 271 ITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCA 330
+T Y + V R+W + ++ +Y++ + L+ + D+ AE F WE+
Sbjct: 298 MTCYAALNDRDGVIRLWEASKIVPGRIPAANYMSAMVCLIKVGDIGRAEWTFGSWEAESK 357
Query: 331 TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
+D+RV+NV++GAY + G +E AE L +GA PN KTWEI + ++++ M AV+
Sbjct: 358 KHDVRVSNVLLGAYVRNGWIEKAERLHLHMLEKGAHPNYKTWEILMEGFVQSKQMDKAVN 417
Query: 391 CLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEP 450
++K + + W P E + ++FE++ V+ A+ F+++L+K + + +++
Sbjct: 418 AMKKGLSLLK--TCHWRPPLELLEAIAKYFEEQGSVEDADRFIKVLQK-FNLTSLPLYKS 474
Query: 451 LIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 484
L+ Y A + + + +++++ E +L+
Sbjct: 475 LLGAYINADIVPQNIPQMIAGDQIDMDEEMDQLI 508
>gi|356510143|ref|XP_003523799.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Glycine max]
Length = 530
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 125/433 (28%), Positives = 226/433 (52%), Gaps = 8/433 (1%)
Query: 63 KKLRDRKLYYPALKLSENME-KRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK 121
+ L K Y+ AL++ + +E ++ + +D A+ L+L+ + + AE YF++LP+++
Sbjct: 95 RTLVKSKCYHHALEVVKWIENQKNFHMIPADYAMKLELIIENYDLMEAEEYFMNLPDSAA 154
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+LL Y + T KAE + K+ EL L S PFN +M LY T K+P ++
Sbjct: 155 KKAACLTLLRGYIRVRDTNKAETFMVKLYELGLVLSPHPFNEMMKLYLATCEYRKVPLVM 214
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVND--ISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
Q+MK + + + +YN+WM A ++ E V +M+ D V W++ + LA+ Y
Sbjct: 215 QQMKRNKVPCNVLSYNLWMNACTEEEGYGVAAVETVFRQMQNDRNVEVGWSSLATLANAY 274
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
+AG +KA LK+ E + + + Y FLITLY V R+W + + +
Sbjct: 275 KKAGQSKKAILVLKDAERKLSTCNRLGYFFLITLYASLKEKEGVLRLWEASKAVGGRISC 334
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+Y+ ++ LV L D+ A++ F EWES C YDIRV+NV++GAYA+ G +E AE L
Sbjct: 335 ANYICILICLVKLGDIVQAKRIFLEWESNCQKYDIRVSNVLLGAYARNGSMEEAESLHLH 394
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
++G PN KT EI + Y+ M A+ +++A+ + W P + +
Sbjct: 395 TLQKGGCPNYKTLEILMEGYVNWQKMDEAIITMKRALAMMK--DCHWRPPHGLVLAIAEY 452
Query: 420 FEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEA 479
E++ ++ A ++ L+ + +++ L+R + +A + +L+ + +K+E+
Sbjct: 453 LEKDGNLKYANKYITDLRN-FGLFSLSLYKILLRMHLSANKPPFHILKMMDEDKIEMDNE 511
Query: 480 SKKLLEAI--CVE 490
+ +L+A CV+
Sbjct: 512 TLSILKAFTGCVQ 524
>gi|168006155|ref|XP_001755775.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693094|gb|EDQ79448.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 429
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 126/403 (31%), Positives = 207/403 (51%), Gaps = 5/403 (1%)
Query: 83 KRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKA 142
++G ++D + +DL +K++ AE + P K L Y +LL Y M +KA
Sbjct: 10 EKGTKWELADNIVRIDLKSKMKQFTVAEQLLENSPPEFKTELAYHTLLKNYVDHQMAQKA 69
Query: 143 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 202
ALLEK+K L FN +M LY + G K+P I+++MKA + D YTYN+ M
Sbjct: 70 GALLEKLKSTGLLTLPFSFNQMMLLYKRKGMENKLPEILEDMKAHGVPKDVYTYNILMDV 129
Query: 203 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 262
+ DI G E++ EE+K D V AD TF LA+ V AGL EKA+ LKE+E + R
Sbjct: 130 KSRSGDIEGMEKIFEELKADENVKADAATFGTLATACVHAGLLEKAKVYLKEMEEGDIFR 189
Query: 263 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 322
+ SAY LI+ YG G++ V R+W ++ + P +N SY+ +I+ L + AE+ +
Sbjct: 190 NRSAYDILISQYGAVGDVDGVERVWEKVK-SGPIVSNRSYITVIEAFGKLGMVEKAEELY 248
Query: 323 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 382
+ R N ++ AY ++G ++ AE+L + + G NA T+ YL+
Sbjct: 249 EVMSQSKGLILSRQFNSLLSAYTRQGLMDKAEKLMDDMEKLGRKKNAITYHHLVTGYLKT 308
Query: 383 GDMKLAVDCLEKA-IDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVD 441
+ AV +++A +D +G W ET+ + F + +V AE + +KKA
Sbjct: 309 DQLDKAVAAMKEALVDPKQGRSKPWF---ETLVAVLDAFAERGNVVNAEQQFQEIKKAYP 365
Query: 442 DLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 484
L ++V+ L++ Y + + L R+ +K+ ++ + LL
Sbjct: 366 RLNIQVYNILLKAYINSRVPALGFLHRMSTDKLVPNDETLSLL 408
>gi|224121672|ref|XP_002330624.1| predicted protein [Populus trichocarpa]
gi|222872228|gb|EEF09359.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 128/404 (31%), Positives = 218/404 (53%), Gaps = 6/404 (1%)
Query: 37 VSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENM-EKRGMNKTVSDQAI 95
V V + ++++ + V ++ ++KLR + AL++S+ M ++RG N + D A+
Sbjct: 47 VPVIPVIEKWVQEGQVVTNSDLKHFIRKLRKIHRFSHALQISQWMSDQRGHNLSPGDVAV 106
Query: 96 HLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLG 155
LDL++KV G++ A YF +PE+ + YG+LLNCY E+AEA + KM+E+
Sbjct: 107 RLDLISKVHGLEQAVTYFNSVPESLRGLEVYGALLNCYAHYKHLEEAEATMRKMREMGFV 166
Query: 156 FSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERV 215
+ + +N ++ LY + G EKI ++QEM+ I + TY + + A A ++I +++
Sbjct: 167 RNVLSYNVMLNLYYQMGKYEKIQVLMQEMEKWGICFSNITYKILLNAYVATSNIEEIKKI 226
Query: 216 IEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS-AYQFLITLY 274
+ +M+ D V+ DW + A+ Y++AGL +K L E + + A + L++LY
Sbjct: 227 LMKMEADPLVSIDWYAYVVAANGYLKAGLIDKTLTMLWRSEQLISGKSARFACETLLSLY 286
Query: 275 GQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDI 334
GN +VYR+W +L + N SYL MI L+ L D+ GAE+ ++EW S +DI
Sbjct: 287 TAVGNKEQVYRVW-NLYKTKGRSLNSSYLCMINSLLKLDDVDGAERIWEEWVSIVKFFDI 345
Query: 335 RVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
R+ NVM+ AY+K+G E AE + G A T + + Y G M A + ++K
Sbjct: 346 RIPNVMVSAYSKKGLWEKAEAFVGKIVASGIKIEASTLDRLATGYHVRGQMLKASETIKK 405
Query: 395 AIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 438
AI + W P+ T+ + + + +DV E L+ILK+
Sbjct: 406 AISISQPG---WKPNVYTLAACLEYLKGREDVKKIEDPLKILKE 446
>gi|125541465|gb|EAY87860.1| hypothetical protein OsI_09282 [Oryza sativa Indica Group]
Length = 517
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 203/394 (51%), Gaps = 3/394 (0%)
Query: 91 SDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMK 150
SD + L+L+AKV G AE Y+ L + LL+CY E +KAE + +++
Sbjct: 118 SDHMVRLELIAKVHGTSQAEEYYRKLSTAASKKAASFPLLHCYVTERNVQKAETFMAELQ 177
Query: 151 ELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDIS 210
L FN +M LY T EK+ ++I MK ++I + +YN+WM A A V+ ++
Sbjct: 178 RYGLPVDPHSFNEIMKLYVATCQYEKVLSVIYLMKRNNIPRNVLSYNIWMNACAEVSGLA 237
Query: 211 GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 270
+ +EM D V W+T+ LA+I+ + G KA L+ E + + Y F+
Sbjct: 238 SVQSAFKEMLNDDMVEVGWSTYCTLANIFKKYGQSSKALACLRTAETKLSSTGRLGYSFI 297
Query: 271 ITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCA 330
+T Y + V R+W + ++ +Y++ + L+ + D+ AE F WE+
Sbjct: 298 MTCYAALNDRDGVIRLWEASKIVPGRIPAANYMSAMVCLIKVGDIGRAEWTFGSWEAESK 357
Query: 331 TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
+D+RV+NV++GAY + G +E AE L +GA PN KTWEI + ++++ M AV+
Sbjct: 358 KHDVRVSNVLLGAYVRNGWIEKAERLHLHMLEKGAHPNYKTWEILMEGFVQSKQMDKAVN 417
Query: 391 CLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEP 450
++K + + W P E + ++FE++ V+ A+ F+++L+K + + +++
Sbjct: 418 AMKKGLSLLK--TCHWRPPLELLEAIAKYFEEQGSVEDADRFIKVLQK-FNLTSLPLYKS 474
Query: 451 LIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 484
L+ Y A + + + +++++ E +L+
Sbjct: 475 LLGAYINADIVPQNIPQMIAGDQIDMDEEMDQLI 508
>gi|168063926|ref|XP_001783918.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664548|gb|EDQ51263.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 448
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 133/418 (31%), Positives = 216/418 (51%), Gaps = 10/418 (2%)
Query: 71 YYPALKLSENM-EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSL 129
Y A+++S+ M E++ + ++D + +DL AK++ AE D P K L Y +L
Sbjct: 37 YKQAMEISDWMSEEKNIKWEMADNIVRIDLKAKMKQFAVAEQLLEDSPPEFKTELAYHTL 96
Query: 130 LNCYCKELMTEKAEALLEKMKELNLGFSSMP--FNSLMTLYAKTGHPEKIPAIIQEMKAS 187
L Y M +KA+ALLEK+K G ++P FN +M LY + G K+ I+ +MK
Sbjct: 97 LRNYADYQMAQKADALLEKLK--GTGILTLPFAFNQMMLLYKRKGMMNKVTEILADMKTH 154
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
+ D YTYN+ M A DI G E++ EE+ D V AD TF LA+ V AGL +K
Sbjct: 155 GVPKDVYTYNILMDVKARSGDIEGMEKIFEELSADENVKADAATFGTLATFCVHAGLLDK 214
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 307
A LKE+E + R+ SAY LI+ YG G+ V R+W ++ + P +N SY+ +I+
Sbjct: 215 ARSYLKEMEEGDVFRNRSAYDILISQYGAVGDQEGVERVWEKVK-SGPVVSNRSYITVIE 273
Query: 308 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
L + AE+ + R N ++ AYA++G +E AE+L E + G
Sbjct: 274 AFGKLGMVEKAEELYGIMSKSKGLILSRQFNSLLSAYARQGLMEKAEKLVEDMVKLGRKK 333
Query: 368 NAKTWEIFSDYYLRNGDMKLAVDCLEKAI-DTGRGDGGKWVPSSETIRTFMRHFEQEKDV 426
NA T+ YL+ + A+ +++A D+ +G WV ET+ + + + + DV
Sbjct: 334 NAVTYHHLVTGYLKTDQLDKALAVMKEAQGDSKQGRSRLWV---ETLISVLDAYAERGDV 390
Query: 427 DGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 484
AE + +KKA ++V+ L++ Y + + L+R+ +K+ +E + LL
Sbjct: 391 ISAEKQFQDIKKAYPRPNIQVYNILLKAYIKSRVPALGFLQRMLADKLVPNEETLNLL 448
>gi|302143279|emb|CBI21840.3| unnamed protein product [Vitis vinifera]
Length = 446
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 130/419 (31%), Positives = 223/419 (53%), Gaps = 62/419 (14%)
Query: 23 EALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENM- 81
E+L R+ VS+ L Q+ K + + + ++ ++KLR K Y AL++ E +
Sbjct: 35 ESLQSRISPAIDLRVSIVPALEQWRKEGRSIKQQDLHRLIRKLRTFKRYNHALEIYEWIR 94
Query: 82 EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEK 141
+K + + D AI LDL++KV G++ AE YF + P + ++ YG+LLNCY ++ EK
Sbjct: 95 DKFYFDISPGDVAIQLDLISKVHGLEQAEKYFNETPNSLRSFQVYGALLNCYSQKKSLEK 154
Query: 142 AEALLEKMKELNLGF-SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 200
AEA++++M+ ++GF ++ +N ++ LY++ G EK+ ++QEM+ + I DS+TY + +
Sbjct: 155 AEAIMQEMR--DMGFVKTLSYNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSFTYCIRL 212
Query: 201 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 260
A A +D+ G E+++ +++ D V +DW + A+ Y++A L EK A++ L+N
Sbjct: 213 NAYCATSDMEGMEKLLMKLETDPAVNSDWNAYIVAANGYLKADLKEK---AVEMLKNS-- 267
Query: 261 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 320
L+ L D+ GAEK
Sbjct: 268 ------------------------------------------------LLKLDDMDGAEK 279
Query: 321 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 380
F+EW SG +D RV N++I AY K+G LE AE+L RA +G +P A TW+ + Y
Sbjct: 280 TFEEWLSGNKFFDFRVPNLLIRAYCKKGLLEKAEQLVSRAIEQGEEPIAVTWDALAAGYH 339
Query: 381 RNGDMKLAVDCLEKA-IDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 438
N M+ AVD L+KA + T +G W P+ T+ + + + + DV+ AE + +L++
Sbjct: 340 ENNQMEKAVDTLKKALLATSQG----WKPNPVTLSACLEYLKGKGDVEEAENLIRLLRE 394
>gi|359484901|ref|XP_002268952.2| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial [Vitis vinifera]
Length = 396
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 116/346 (33%), Positives = 182/346 (52%), Gaps = 3/346 (0%)
Query: 25 LYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKR 84
L R+FK SV L ++L +V E+ + K+LR + Y AL++SE M
Sbjct: 46 LKSRIFKLRLPKRSVTNVLQRWLGEGNQVHISELRNISKELRRAQRYKHALEISEWMVSH 105
Query: 85 G-MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAE 143
+ SD A+ +DL+ +V GIDAAE YF LP +K TY +LL+ Y + EKAE
Sbjct: 106 DEFELSDSDNAVRIDLMTRVFGIDAAERYFEGLPSAAKTSETYTALLHSYAGAKLAEKAE 165
Query: 144 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 203
L E++KE N+ + + +N +MTLY G EK+ +++E+K ++PD +TYN+W+ +
Sbjct: 166 ELYERIKESNVPLNILLYNEMMTLYMSVGQVEKVSLVVEELKRQKVVPDLFTYNLWVSSC 225
Query: 204 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG-LFEKAERALKELENRNAHR 262
AA DI G R+++EM + W + NLA+IY+ AG L A ++ E R
Sbjct: 226 AATLDIDGVRRILKEMSNNSSANDGWVRYRNLANIYIMAGHLVNSASNSVVEAGTNTTQR 285
Query: 263 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 322
D Y FLI LY GN ++ +IW+SL++ + SY+ ++ V L +
Sbjct: 286 DWITYDFLIILYAGLGNKDKIDQIWKSLKMTKQKIKSRSYVCILSSYVMLGHIKDVGIVI 345
Query: 323 KEWESGCAT-YDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
EW+ T +DI V ++ A+A+ +E AE + R+ P
Sbjct: 346 DEWKKSTTTDFDISVFYRLLDAFAELRLIEEAETFHKLLIRKSCLP 391
>gi|298572960|gb|ADI88477.1| PPR protein [Silene vulgaris]
Length = 224
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/224 (39%), Positives = 136/224 (60%)
Query: 116 LPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
+P+T K+ YG+LLN Y + +KAE L+E+M+ + +P+N +MTLY K +
Sbjct: 1 VPDTLKDMRLYGALLNAYVAAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
K+ ++ EMK I DSY+YN+W+ A + E+V +EM D R+A +WTTFS +
Sbjct: 61 KVEELVSEMKQKKIQLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIAPNWTTFSTM 120
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
A++Y + G EKAE+ L+ LE R +RD Y +LI+LYG GN EVYR+W + FP
Sbjct: 121 AAMYSKLGQLEKAEQCLRNLETRITNRDRMPYHYLISLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
N N Y ++I LV D+ GAEK ++EW +++D ++ N+
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298571976|gb|ADI87985.1| PPR protein [Silene latifolia]
gi|298571992|gb|ADI87993.1| PPR protein [Silene latifolia]
gi|298572000|gb|ADI87997.1| PPR protein [Silene latifolia]
gi|298572064|gb|ADI88029.1| PPR protein [Silene latifolia]
Length = 224
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/224 (39%), Positives = 136/224 (60%)
Query: 116 LPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
+P+T K+ YG+LLN Y + +KAE L+E+M+ + +P+N +MTLY K +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
K+ ++ EMK I DSY+YN+W+ A + E+V +EM D R+ +WTTFS +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
AS+Y ++G EKAE+ L+ LE R +RD Y +L++LYG GN EVYR+W + FP
Sbjct: 121 ASMYAKSGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
N N Y ++I LV D+ GAEK ++EW +++D ++ N+
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572018|gb|ADI88006.1| PPR protein [Silene latifolia]
Length = 224
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/224 (39%), Positives = 136/224 (60%)
Query: 116 LPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
+P+T K+ YG+LLN Y + +KAE L+E+M+ + +P+N +MTLY K +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
K+ ++ EMK I DSY+YN+W+ A + E+V +EM D R+ +WTTFS +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSHGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
AS+Y ++G EKAE+ L+ LE R +RD Y +L++LYG GN EVYR+W + FP
Sbjct: 121 ASMYAKSGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
N N Y ++I LV D+ GAEK ++EW +++D ++ N+
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572036|gb|ADI88015.1| PPR protein [Silene latifolia]
Length = 224
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/224 (39%), Positives = 136/224 (60%)
Query: 116 LPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
+P+T K+ YG+LLN Y + +KAE L+E+M+ + +P+N +MTLY K +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
K+ ++ EMK I DSY+YN+W+ A + E+V +EM D R+ +WTTFS +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
AS+Y ++G EKAE+ L+ LE R +RD Y +L++LYG GN EVYR+W + FP
Sbjct: 121 ASMYAKSGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
N N Y ++I LV D+ GAEK ++EW +++D ++ N+
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572016|gb|ADI88005.1| PPR protein [Silene latifolia]
Length = 224
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/224 (39%), Positives = 136/224 (60%)
Query: 116 LPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
+P+T K+ YG+LLN Y + +KAE L+E+M+ + +P+N +MTLY K +
Sbjct: 1 VPDTLKDMRLYGALLNAYGGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
K+ ++ EMK I DSY+YN+W+ A + E+V +EM D R+ +WTTFS +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
AS+Y ++G EKAE+ L+ LE R +RD Y +L++LYG GN EVYR+W + FP
Sbjct: 121 ASMYAKSGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
N N Y ++I LV D+ GAEK ++EW +++D ++ N+
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298571978|gb|ADI87986.1| PPR protein [Silene latifolia]
gi|298571980|gb|ADI87987.1| PPR protein [Silene latifolia]
gi|298571982|gb|ADI87988.1| PPR protein [Silene latifolia]
gi|298571990|gb|ADI87992.1| PPR protein [Silene latifolia]
gi|298571994|gb|ADI87994.1| PPR protein [Silene latifolia]
gi|298571996|gb|ADI87995.1| PPR protein [Silene latifolia]
gi|298571998|gb|ADI87996.1| PPR protein [Silene latifolia]
gi|298572002|gb|ADI87998.1| PPR protein [Silene latifolia]
gi|298572020|gb|ADI88007.1| PPR protein [Silene latifolia]
gi|298572022|gb|ADI88008.1| PPR protein [Silene latifolia]
Length = 224
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 88/224 (39%), Positives = 135/224 (60%)
Query: 116 LPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
+P+T K+ YG+LLN Y + +KAE L+E+M+ + +P+N +MTLY K +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
K+ ++ EMK I DSY+YN+W+ A + E+V +EM D R+ +WTTFS +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
AS+Y + G EKAE+ L+ LE R +RD Y +L++LYG GN EVYR+W + FP
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
N N Y ++I LV D+ GAEK ++EW +++D ++ N+
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572062|gb|ADI88028.1| PPR protein [Silene latifolia]
Length = 224
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 88/224 (39%), Positives = 135/224 (60%)
Query: 116 LPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
+P+T K+ YG+LLN Y + +KAE L+E+M+ + +P+N +MTLY K +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
K+ ++ EMK I DSY+YN+W+ A + E+V +EM D R+ +WTTFS +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSHGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
AS+Y + G EKAE+ L+ LE R +RD Y +L++LYG GN EVYR+W + FP
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
N N Y ++I LV D+ GAEK ++EW +++D ++ N+
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572014|gb|ADI88004.1| PPR protein [Silene latifolia]
gi|298572038|gb|ADI88016.1| PPR protein [Silene latifolia]
Length = 224
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 88/224 (39%), Positives = 135/224 (60%)
Query: 116 LPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
+P+T K+ YG+LLN Y + +KAE L+E+M+ + +P+N +MTLY K +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
K+ ++ EMK I DSY+YN+W+ A + E+V +EM D R+ +WTTFS +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
AS+Y + G EKAE+ L+ LE R +RD Y +L++LYG GN EVYR+W + FP
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
N N Y ++I LV D+ GAEK ++EW +++D ++ N+
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572024|gb|ADI88009.1| PPR protein [Silene latifolia]
gi|298572032|gb|ADI88013.1| PPR protein [Silene latifolia]
gi|298572044|gb|ADI88019.1| PPR protein [Silene latifolia]
gi|298572056|gb|ADI88025.1| PPR protein [Silene latifolia]
Length = 224
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 88/224 (39%), Positives = 135/224 (60%)
Query: 116 LPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
+P+T K+ YG+LLN Y + +KAE L+E+M+ + +P+N +MTLY K +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
K+ ++ EMK I DSY+YN+W+ A + E+V +EM D R+ +WTTFS +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
AS+Y + G EKAE+ L+ LE R +RD Y +L++LYG GN EVYR+W + FP
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
N N Y ++I LV D+ GAEK ++EW +++D ++ N+
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298571986|gb|ADI87990.1| PPR protein [Silene latifolia]
Length = 224
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 88/224 (39%), Positives = 135/224 (60%)
Query: 116 LPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
+P+T K+ YG+LLN Y + +KAE L+E+M+ + +P+N +MTLY K +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
K+ ++ EMK I DSY+YN+W+ A + E+V +EM D R+ +WTTFS +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
AS+Y + G EKAE+ L+ LE R +RD Y +L++LYG GN EVYR+W + FP
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
N N Y ++I LV D+ GAEK ++EW +++D ++ N+
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572066|gb|ADI88030.1| PPR protein [Silene latifolia]
Length = 224
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 87/224 (38%), Positives = 135/224 (60%)
Query: 116 LPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
+P+T K+ YG+LLN Y + +KAE L+E+M+ + +P+N +MTLY K +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
K+ ++ EMK I DSY+YN+W+ A + E+V +EM D R+ +WTTFS +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
AS+Y + G +KAE+ L+ LE R +RD Y +L++LYG GN EVYR+W + FP
Sbjct: 121 ASMYAKLGQLDKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
N N Y ++I LV D+ GAEK ++EW +++D ++ N+
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572026|gb|ADI88010.1| PPR protein [Silene latifolia]
gi|298572046|gb|ADI88020.1| PPR protein [Silene latifolia]
Length = 224
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 88/224 (39%), Positives = 135/224 (60%)
Query: 116 LPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
+P+T K+ YG+LLN Y + +KAE L+E+M+ + +P+N +MTLY K +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
K+ ++ EMK I DSY+YN+W+ A + E+V +EM D R+ +WTTFS +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
AS+Y + G EKAE+ L+ LE R +RD Y +L++LYG GN EVYR+W + FP
Sbjct: 121 ASMYAKLGELEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
N N Y ++I LV D+ GAEK ++EW +++D ++ N+
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298571988|gb|ADI87991.1| PPR protein [Silene latifolia]
Length = 224
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 87/224 (38%), Positives = 135/224 (60%)
Query: 116 LPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
+P+T K+ YG+LLN Y + +KAE L+E+M+ + +P+N +MTLY K +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
K+ ++ EMK I DSY+YN+W+ A + E+V +EM D R+ +WTTFS +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
AS+Y ++G EKAE+ L+ LE R +RD Y +L++LYG GN EVYR+W + FP
Sbjct: 121 ASMYAKSGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
N Y ++I LV D+ GAEK ++EW +++D ++ N+
Sbjct: 181 KIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572010|gb|ADI88002.1| PPR protein [Silene latifolia]
gi|298572034|gb|ADI88014.1| PPR protein [Silene latifolia]
gi|298572054|gb|ADI88024.1| PPR protein [Silene latifolia]
Length = 224
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 88/224 (39%), Positives = 134/224 (59%)
Query: 116 LPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
+P+T K+ YG+LLN Y + +KAE L+E+M+ + +P+N +MTLY K +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
K+ ++ EMK I DSY+YN+W+ A + E+V EM D R+ +WTTFS +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
AS+Y + G EKAE+ L+ LE R +RD Y +L++LYG GN EVYR+W + FP
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
N N Y ++I LV D+ GAEK ++EW +++D ++ N+
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572058|gb|ADI88026.1| PPR protein [Silene latifolia]
Length = 224
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 88/224 (39%), Positives = 134/224 (59%)
Query: 116 LPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
+P+T K+ YG+LLN Y + +KAE L+E+M+ + +P+N +MTLY K +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
K+ ++ EMK I DSY+YN+W+ A + E+V EM D R+ +WTTFS +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
AS+Y + G EKAE+ L+ LE R +RD Y +L++LYG GN EVYR+W + FP
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
N N Y ++I LV D+ GAEK ++EW +++D ++ N+
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572060|gb|ADI88027.1| PPR protein [Silene latifolia]
Length = 224
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/224 (38%), Positives = 134/224 (59%)
Query: 116 LPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
+P+T K+ YG+LLN Y + +KAE L+E+M+ + +P+N +MTLY K +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
K+ ++ EMK I DSY+YN+W+ A + E+V +EM D R+ +WTTFS +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
AS+Y + G EKAE+ L+ LE R +RD Y +L++LYG GN EVYR+W + FP
Sbjct: 121 ASMYAKLGKLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
N Y ++I LV D+ GAEK ++EW +++D ++ N+
Sbjct: 181 KIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572008|gb|ADI88001.1| PPR protein [Silene latifolia]
gi|298572012|gb|ADI88003.1| PPR protein [Silene latifolia]
gi|298572028|gb|ADI88011.1| PPR protein [Silene latifolia]
gi|298572052|gb|ADI88023.1| PPR protein [Silene latifolia]
Length = 224
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/224 (38%), Positives = 134/224 (59%)
Query: 116 LPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
+P+T K+ YG+LLN Y + +KAE L+E+M+ + +P+N +MTLY K +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
K+ ++ EMK I DSY+YN+W+ A + E+V +EM D R+ +WTTFS +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
AS+Y + G EKAE+ L+ LE R +RD Y +L++LYG GN EVYR+W + FP
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
N Y ++I LV D+ GAEK ++EW +++D ++ N+
Sbjct: 181 KIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298571984|gb|ADI87989.1| PPR protein [Silene latifolia]
Length = 224
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 87/224 (38%), Positives = 134/224 (59%)
Query: 116 LPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
+P+T K+ YG+LLN Y + +KAE L+E+M+ + +P+N +MTLY K +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
K+ ++ EMK I DSY+YN+W+ A + E+V +EM D R+ +WTTFS +
Sbjct: 61 KVEDLVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
AS+Y + G EKAE+ L+ LE R +RD Y +L++LYG GN EVYR+W + FP
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
N Y ++I LV D+ GAEK ++EW +++D ++ N+
Sbjct: 181 KIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|449438490|ref|XP_004137021.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 334
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/294 (34%), Positives = 162/294 (55%), Gaps = 5/294 (1%)
Query: 146 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 205
++KM+E+ + + +N+++ LYA G EK+ +++EM+ I PD +TYN+ M A AA
Sbjct: 1 MQKMREVGFMKTPLSYNAMLNLYAHLGKHEKLAELLKEMEEMGIGPDRFTYNIRMNAYAA 60
Query: 206 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD-L 264
+DI+ E+++ +M+ D VA DW T+ + + Y +AGL E + LK+ E +
Sbjct: 61 ASDITNMEKLLSKMEADPLVATDWHTYFVVGNGYFKAGLSENSILMLKKAEQFIGDKQKW 120
Query: 265 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 324
AYQ+L+TLY GN EVYR+W +L N YL +I L+ L D+ GAE+ KE
Sbjct: 121 LAYQYLMTLYAAIGNKDEVYRVW-NLYTNLQKRFNSGYLCIISSLMKLDDIDGAERILKE 179
Query: 325 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 384
WESG ++D R+ N+MI +Y +G ++ AE R G +P A TW++ + Y NG
Sbjct: 180 WESGDTSFDFRIPNMMINSYCTKGFVDKAEAYINRLIETGKEPEANTWDLLASGYHSNGL 239
Query: 385 MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 438
+ L+KAI W P + + + + ++VD AE + +L K
Sbjct: 240 TNKVAETLKKAISVSP---PHWKPKYHILAACLEYLKTNENVDLAEEIIGLLCK 290
>gi|255563224|ref|XP_002522615.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538091|gb|EEF39702.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 426
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 114/358 (31%), Positives = 183/358 (51%), Gaps = 3/358 (0%)
Query: 17 SKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALK 76
S K +E+ L R+F+ S ++ ++ V E+ + +LR + Y AL+
Sbjct: 68 SSKEIEDDLKSRIFRLRLPKRSATNIIHNWVSEGNTVTASELRNISNELRKLQRYKHALE 127
Query: 77 LSENM-EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCK 135
+SE M + D A +DL+ KV GIDAAE YF LP T K TY +LL+ Y
Sbjct: 128 ISEWMVTNKEFELMDFDYATRIDLMTKVFGIDAAERYFEGLPITVKTSETYTALLHSYAG 187
Query: 136 ELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYT 195
KAE L E++K NL F+++ +N +MTLY G EK+ +++E+K I PD +T
Sbjct: 188 VKQLGKAEELYERIKGSNLSFTALTYNEMMTLYMSVGQVEKVSLVVEELKRQKIAPDIFT 247
Query: 196 YNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG-LFEKAERALKE 254
YN+W+ + AA+ +I R+++EMK D DW + ++A+IYV+AG L A+ E
Sbjct: 248 YNLWISSCAAILNIDQVTRILDEMKHDSGCNDDWLRYIDIANIYVKAGHLVNTESSAVVE 307
Query: 255 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 314
E R+ Y FLI LY + +V +IW+SLR+ N +++ ++ + L
Sbjct: 308 AEKSITQREWITYDFLIILYAGLRDKDKVDQIWKSLRMTKQKMTNRNFVCILSSYMMLGH 367
Query: 315 LPGAEKCFKEWESGCAT-YDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
L A + +W+ T +D+ + ++ A++ G E A + R DP T
Sbjct: 368 LKEAGEVLDQWKKSTTTDFDLSACSRLLDAFSGSGLTEIANDFHMLLIERNCDPTNLT 425
>gi|298572050|gb|ADI88022.1| PPR protein [Silene latifolia]
Length = 224
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 87/224 (38%), Positives = 134/224 (59%)
Query: 116 LPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
+P+T K+ YG+LLN Y + +KAE L+E+M+ + +P+N +MTLY K +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
++ ++ EMK I DSY+YN+W+ A + E+V EM D R+ +WTTFS +
Sbjct: 61 EVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
AS+Y + G EKAE+ L+ LE R +RD Y +L++LYG GN EVYR+W + FP
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
N N Y ++I LV D+ GAEK ++EW +++D ++ N+
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572040|gb|ADI88017.1| PPR protein [Silene latifolia]
Length = 224
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 87/224 (38%), Positives = 134/224 (59%)
Query: 116 LPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
+P+T K+ YG+LLN Y + +KAE L+E+M+ + +P+N +MTLY K +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
K+ ++ EMK I DSY+YN+W+ A + E+V +EM D R+ +WTTFS +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
AS+Y + G EKAE+ L+ LE R +RD Y +L++LYG GN EVYR+W + F
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFT 180
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
N N Y ++I LV D+ GAEK ++EW +++D ++ N+
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572004|gb|ADI87999.1| PPR protein [Silene latifolia]
gi|298572006|gb|ADI88000.1| PPR protein [Silene latifolia]
Length = 224
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 87/224 (38%), Positives = 133/224 (59%)
Query: 116 LPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
+P+T K+ YG+LLN Y + +KAE L+E+M+ + +P+N +MTLY K +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
K+ ++ EMK I DSY+YN+W+ A + E+V EM D R+ +WTTFS +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
AS+Y + G EKAE+ L+ LE R +RD Y +L++LYG GN EVYR+W + FP
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
N Y ++I LV D+ GAEK ++EW +++D ++ N+
Sbjct: 181 KIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572042|gb|ADI88018.1| PPR protein [Silene latifolia]
Length = 224
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 87/224 (38%), Positives = 134/224 (59%)
Query: 116 LPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
+P+T K+ YG+LLN Y + +KAE L+E+M+ + +P+N +MTLY K +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
K+ ++ EMK I DSY+YN+W+ A + E+V +EM D R+ +WTTFS +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
AS+Y + G EKAE+ L+ LE R +RD Y +L++LYG GN EVYR+W + F
Sbjct: 121 ASMYAKLGELEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFT 180
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
N N Y ++I LV D+ GAEK ++EW +++D ++ N+
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|449438238|ref|XP_004136896.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Cucumis sativus]
gi|449478839|ref|XP_004155431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Cucumis sativus]
Length = 406
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 108/346 (31%), Positives = 184/346 (53%), Gaps = 3/346 (0%)
Query: 25 LYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKR 84
L R+F+ S + L ++ +V E+ + K+LR + Y AL++ E M
Sbjct: 58 LKSRIFQLRLPKRSAIRVLERWTSEGNQVTIAELRNISKELRKIQRYKHALEILEWMVSH 117
Query: 85 GMNK-TVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAE 143
++ + SD AI +DL+ KV G+DAAE YF LP +K TY +LL+ + +T+KAE
Sbjct: 118 NQSELSDSDFAIRIDLMTKVFGVDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTDKAE 177
Query: 144 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 203
L EKMKE ++ +++PFN +MTLY G EK+ +I+ ++K + PD +TYN+W+ +L
Sbjct: 178 TLYEKMKESDIPLTALPFNEMMTLYTSIGQVEKVSSIVDDLKQRMVHPDIFTYNLWISSL 237
Query: 204 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE-AGLFEKAERALKELENRNAHR 262
AA +I G ++++ EM + +W + L +IYV+ A L ++ E + + R
Sbjct: 238 AAALNIDGVKQILNEMNHNPNSNENWVRYIELVNIYVKSANLLHSESNSVVESVSGISQR 297
Query: 263 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 322
+ Y LI LY GN ++ +IWRSLR+ + +Y+ ++ + L DL +
Sbjct: 298 EWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICIVSCYLMLDDLKEIGEVI 357
Query: 323 KEWESGCAT-YDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
+W+ T +DI N ++ A+ + G E A ++ +P
Sbjct: 358 DQWKQSTTTDFDISSCNRLVNAFIEAGLHEKANSFVNVLIQKNCEP 403
>gi|298572048|gb|ADI88021.1| PPR protein [Silene latifolia]
Length = 224
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 86/224 (38%), Positives = 133/224 (59%)
Query: 116 LPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
+P+T K+ YG+LLN Y + +KAE L+E+M+ + +P+N +MTLY K +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
++ ++ EMK I DSY+YN+W+ + E+V EM D R+ +WTTFS +
Sbjct: 61 EVEELVSEMKQKKISLDSYSYNIWLSTRGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
AS+Y + G EKAE+ L+ LE R +RD Y +L++LYG GN EVYR+W + FP
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
N N Y ++I LV D+ GAEK ++EW +++D ++ N+
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572030|gb|ADI88012.1| PPR protein [Silene latifolia]
Length = 224
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 86/224 (38%), Positives = 133/224 (59%)
Query: 116 LPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
+P+T K+ YG+LLN Y + +KAE L+E+M+ + +P+N +MTLY K +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
++ ++ EMK I DSY+YN+W+ A + E+V EM D R+ +WTTFS +
Sbjct: 61 EVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
AS+Y + G EKAE+ L+ LE R +RD Y +L++LYG GN EVYR+W + FP
Sbjct: 121 ASMYAKLGELEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
N Y ++I LV D+ GAEK ++EW +++D ++ N+
Sbjct: 181 KIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|326504234|dbj|BAJ90949.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 200
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/159 (54%), Positives = 112/159 (70%)
Query: 332 YDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDC 391
YDIRV N ++ AY EG L+ A LK+RA+ RG NAKTWEIF ++YL+ GD+K A C
Sbjct: 42 YDIRVANALMKAYVTEGMLDKAIALKKRAKMRGGRLNAKTWEIFMEHYLKVGDLKNAHWC 101
Query: 392 LEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPL 451
++AI G G WVP + T M +FE++KDVDGAE F+E+LKK DLG VFEPL
Sbjct: 102 ADRAIKKGHSSGRIWVPPHDVTETLMGYFEKKKDVDGAESFVEVLKKVQKDLGTVVFEPL 161
Query: 452 IRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAICVE 490
+RTYAAAG+ P M RLK+E VE+SE + KL+++ICV+
Sbjct: 162 VRTYAAAGKKFPGMRHRLKIENVELSEETDKLVDSICVD 200
>gi|356525847|ref|XP_003531533.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Glycine max]
Length = 395
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 180/350 (51%), Gaps = 3/350 (0%)
Query: 10 TKNIAKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRK 69
+ ++ + S + +++ L R+F+ S L +++ V ++ D K+LR +
Sbjct: 32 SSDLVEESVEGVDDDLRSRIFRLRLPKRSATNVLQKWVLQGNPVTLSQLRDISKELRRSQ 91
Query: 70 LYYPALKLSENM-EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGS 128
Y AL++SE M + SD A +DL KV GIDAAE YF LP +K TY +
Sbjct: 92 RYKHALEISEWMVSHEEYELSDSDYAARIDLTTKVFGIDAAERYFEGLPLATKTAETYTA 151
Query: 129 LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS 188
LL+ Y +T+KAE L +++K+ NL F ++ +N +MTLY G EK+P++++E+K
Sbjct: 152 LLHSYAGAKLTKKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQFEKVPSVVEELKQQK 211
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
+ PD +TYN+W+ AA+ +I R+++EM W + NLA+IY+ G + A
Sbjct: 212 VSPDIFTYNLWISYCAAILNIDEVRRILDEMSHGAGSNESWIRYLNLANIYISVGHLDNA 271
Query: 249 -ERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 307
L E E R R Y FLI LYG G+ ++ +IW SLR+ + +Y+ +I
Sbjct: 272 SSNTLVETEKRITQRQWITYDFLIILYGGLGSKDKLDQIWNSLRMTKQKMISRNYICIIS 331
Query: 308 VLVNLKDLPGAEKCFKEWESGCAT-YDIRVTNVMIGAYAKEGRLENAEEL 356
+ L + +W+ T +D+ ++ A+ G E A L
Sbjct: 332 SYLMLGHTKEVGEVIDQWKQSTTTDFDMLACKKIMVAFRDMGLAEIANNL 381
>gi|388490914|gb|AFK33523.1| unknown [Lotus japonicus]
Length = 358
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 99/260 (38%), Positives = 150/260 (57%), Gaps = 6/260 (2%)
Query: 57 EVGDTLKKLRDRKLYYPALKLSENM---EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF 113
E+ D K+LR + Y AL++SE M E+ G++ SD A+ +DL+ KV GIDAAE YF
Sbjct: 84 ELRDIAKELRRSQRYKHALEISEWMITHEEHGLSD--SDYAMRIDLMTKVFGIDAAERYF 141
Query: 114 VDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGH 173
LP +K TY +LL+ Y MTEKAE L +++K+ NL F ++ +N +MTLY G
Sbjct: 142 EALPVAAKTSETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQ 201
Query: 174 PEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFS 233
EK+P++++E+K ++ PD +TYN+W+ + AA +I R+++EM WT +
Sbjct: 202 VEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNESWTRYL 261
Query: 234 NLASIYVEAG-LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL 292
NLA++YV A L + +L E E R Y FLI LY G+ ++ +IW SLR+
Sbjct: 262 NLANVYVTASRLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRM 321
Query: 293 AFPNTANISYLNMIQVLVNL 312
N +Y +I + L
Sbjct: 322 TKQKMINRNYSCIISAYLML 341
>gi|224141193|ref|XP_002323959.1| predicted protein [Populus trichocarpa]
gi|222866961|gb|EEF04092.1| predicted protein [Populus trichocarpa]
Length = 355
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 180/339 (53%), Gaps = 9/339 (2%)
Query: 22 EEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENM 81
E+ L R+F+ SV ++++++ V E+ K+LR + + AL++SE M
Sbjct: 7 EDDLKGRIFRLRLPKRSVTNVIDKWVREGNTVSSSELRHISKELRKSQRFKHALEISEWM 66
Query: 82 ---EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELM 138
E+ ++ T D A +DL+ KV G+DAAE YF LP +K TY +LL+ Y +
Sbjct: 67 VAHEEFELSDT--DHASRIDLMTKVFGVDAAERYFDGLPLAAKTTETYTALLHSYAAAKL 124
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
EKAE +++K NL F+++ +N +MTLY G EK+ +++E+K + PD +TYN+
Sbjct: 125 IEKAEEFYKRIKGSNLPFTALMYNEMMTLYMSVGQLEKVSQVVEELKHQKVAPDIFTYNL 184
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER---ALKEL 255
W+ + AA +I R+++EM +D V DW + + +IYV AG AE A+ E
Sbjct: 185 WISSCAAALNIDKVRRILDEMSQDSGVNDDWMRYIKIVNIYVTAGHLVNAESSTAAVVEA 244
Query: 256 ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDL 315
E + R+ Y FL+ LY G ++ +IW+SLR+ + +++ ++ + L L
Sbjct: 245 EKKITQREWITYDFLVILYAGLGKKDKIDQIWKSLRMTNQKMTSRNFVCILSSYLMLGHL 304
Query: 316 PGAEKCFKEWESGCAT-YDIRVTNVMIGAYAKEGRLENA 353
+ +W+ T +DI N ++ A + G E A
Sbjct: 305 KEVGEIVDQWKQSTTTDFDISACNRLLDAISCLGLTEIA 343
>gi|356554749|ref|XP_003545705.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Glycine max]
Length = 399
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/303 (33%), Positives = 160/303 (52%), Gaps = 3/303 (0%)
Query: 57 EVGDTLKKLRDRKLYYPALKLSENM-EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVD 115
++ D K+LR + Y AL++SE M + SD A+ +DL+ +V GIDAAE YF
Sbjct: 83 QLRDISKELRRSQRYKHALEISEWMVSNEEYELSDSDYAVRIDLMTQVFGIDAAERYFEG 142
Query: 116 LPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
LP +K TY +LL+ Y +TEKAE L +++K+ NL F ++ +N +MTLY G E
Sbjct: 143 LPLATKTTETYTALLHSYAGAKLTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQFE 202
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
K+P +++E+K + PD +TYN+W+ + AA+ +I R+++EM W + NL
Sbjct: 203 KVPIVVEELKQQKVSPDIFTYNLWISSCAAILNIDEVRRILDEMSHGAGSNESWIRYLNL 262
Query: 236 ASIYVEAGLFEKA-ERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF 294
A+IY+ + A L E E R R Y FLI LYG G+ ++ +IW SL +
Sbjct: 263 ANIYISVAHLDNASSNTLVETEKRITQRQWITYDFLIILYGGLGSKDKLDQIWNSLGMTK 322
Query: 295 PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCAT-YDIRVTNVMIGAYAKEGRLENA 353
+ +Y+ +I + L + +W+ T +D+ ++ A+ G E A
Sbjct: 323 QKMISRNYMCIISSYLMLGLTKEVGEVIDQWKQSTTTDFDMLACKKILVAFRDIGLAEIA 382
Query: 354 EEL 356
L
Sbjct: 383 NNL 385
>gi|297729245|ref|NP_001176986.1| Os12g0527850 [Oryza sativa Japonica Group]
gi|255670359|dbj|BAH95714.1| Os12g0527850 [Oryza sativa Japonica Group]
Length = 313
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/254 (37%), Positives = 150/254 (59%), Gaps = 3/254 (1%)
Query: 23 EALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENME 82
+ L RL K S L ++ + + V K+++ +++LR + + AL++ E M
Sbjct: 28 DTLGRRLLKLIYPKRSAAVVLRRWAEEGRTVQKYQLNRVVRELRKYRRFKHALEICEWMR 87
Query: 83 KRG-MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEK 141
+ M D A+HLDLVAKV+G+ +AE +F D+PE +K T +LL+ Y + +K
Sbjct: 88 TQPEMRLLPGDHAVHLDLVAKVRGLPSAEKFFEDMPERAKGPSTCNALLHAYVQHGRRDK 147
Query: 142 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 201
AEA+LE+M + ++PFN +M+LY +G EK+P +I+E++ +I PD TYN+W+
Sbjct: 148 AEAMLEEMAKAGYLTCALPFNHMMSLYMSSGELEKVPEMIKELRRYTI-PDLVTYNIWLT 206
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 261
+ N + AE+V + MK D RV DW TFS L SIY+ AGL K AL E+E R +
Sbjct: 207 YCSKKNSVKAAEKVYDLMK-DERVVPDWMTFSLLGSIYINAGLHVKGRDALVEMEKRASR 265
Query: 262 RDLSAYQFLITLYG 275
++ +AY L+TLY
Sbjct: 266 KERAAYSSLLTLYA 279
>gi|242073288|ref|XP_002446580.1| hypothetical protein SORBIDRAFT_06g018360 [Sorghum bicolor]
gi|241937763|gb|EES10908.1| hypothetical protein SORBIDRAFT_06g018360 [Sorghum bicolor]
Length = 415
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 176/336 (52%), Gaps = 2/336 (0%)
Query: 25 LYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKR 84
L R+F+ G + S L+++ + E+ + L + Y AL++++ M+
Sbjct: 63 LRSRIFRLGLAKRSATAALDKWSGEGRAAPAAELRRIARDLSRVRRYKHALEVADWMKTH 122
Query: 85 GMNK-TVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAE 143
+ + SD + +DL+ KV G AAE++F LP +K+ Y +LL+ Y + MT+KAE
Sbjct: 123 HESDLSESDYGMRIDLITKVFGASAAEDFFEKLPPGAKSLEAYTALLHSYGRSKMTDKAE 182
Query: 144 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 203
L E+MK+ NL ++ +N +MTLY G +K+ I +E+K ++ PD +TYN+ + A
Sbjct: 183 RLFERMKDANLSMDALVYNEMMTLYISVGELDKVEIIAEELKRQNVSPDLFTYNLRVSAA 242
Query: 204 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 263
AA D+ G + +++EM +D WT + NLAS+YV+A + +L E E + + R+
Sbjct: 243 AASMDLEGFKGILDEMSKDPNSKEGWTLYRNLASVYVDASQLVGSGNSLVEAEAKISQRE 302
Query: 264 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 323
Y FL+ L+ GN + IW+S+ + + +Y+ +I + L A +
Sbjct: 303 WITYDFLVILHAGLGNQERIKDIWKSMVMTSQRMTSRNYICVISSYLMCGQLKDAGEIVD 362
Query: 324 EWE-SGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+W+ S +DI N ++ A G + A+ +E
Sbjct: 363 QWQRSKAPEFDISACNRLLDALLSAGLTDTADRFRE 398
>gi|357163843|ref|XP_003579864.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Brachypodium distachyon]
Length = 422
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 160/290 (55%), Gaps = 2/290 (0%)
Query: 71 YYPALKLSENMEKRGMNK-TVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSL 129
Y AL+++E M+ + + +D + +DL+ KV G +AAE++F LP +K+ Y +L
Sbjct: 116 YKHALEVAEWMKTHHESDLSENDYGVRIDLITKVFGANAAEDFFEKLPSEAKSLEAYTAL 175
Query: 130 LNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
L+ Y + MT+KAE L E+MK+ +L + +N +MTLY G +K+PA+ +E+K ++
Sbjct: 176 LHSYARSKMTDKAERLFERMKDADLSIDVLVYNEMMTLYISVGELDKVPAVAEELKRQNV 235
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
PD +TYN+ + A AA D+ + +++EM +D WT + NLA+IYV A +
Sbjct: 236 SPDLFTYNLRISASAASMDLEIFKGILDEMSKDPNSNEGWTLYRNLATIYVNASQLVSSG 295
Query: 250 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 309
+L E E + + R+ Y FLI L+ GNL V IW+S+++ + +Y+ ++
Sbjct: 296 NSLVEAEAKISQREWITYDFLILLHTGLGNLERVKDIWKSMQMTSQRMTSRNYICVLSSY 355
Query: 310 VNLKDLPGAEKCFKEWE-SGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+ L A++ +W+ S +DI N + A G + A+ +E
Sbjct: 356 LMCGQLKDAKEIVDQWQRSKAPEFDISACNRLFDALLGAGFTDTADSFRE 405
>gi|297851240|ref|XP_002893501.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339343|gb|EFH69760.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 667
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 113/344 (32%), Positives = 179/344 (52%), Gaps = 20/344 (5%)
Query: 40 RQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGM-NKTVSDQAIHLD 98
RQQ NQ S RV +KKLRD AL++SE M K + N D A L
Sbjct: 52 RQQGNQVNPSHVRVI-------IKKLRDSDQSLQALQVSEWMSKEKICNLIPEDFAARLH 104
Query: 99 LVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTE-KAEALLEKMKELNLGFS 157
L+ V G++ AE +F +P+ +++ Y +LLN Y + T KAEA +KM+EL L
Sbjct: 105 LIENVVGLEEAEKFFESIPKNARDDSVYTTLLNWYARSDKTLCKAEATFQKMRELGLLSR 164
Query: 158 SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIE 217
P+N++M+LY EK+ +++EMK + + DS T N ++ +AV D++ E+ +
Sbjct: 165 PSPYNAMMSLYIALNDREKVEELLREMKDNDVEADSITVNNVLKLYSAVCDVTAMEKFLN 224
Query: 218 EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK---ELENRNAHRDLSAYQFLITLY 274
+ + + +W T ++A Y+ A KA + L+ EL +R + + SAY L+ LY
Sbjct: 225 KWEGINGIKLEWLTTLDMAKAYLRARSNGKAIKMLRLTEELADRKSLK--SAYDHLMKLY 282
Query: 275 GQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDI 334
G+ GN EV RIW ++ N Y +I+ L+ + D+ GAE+ +K WES +DI
Sbjct: 283 GEAGNREEVLRIWNLYKMNIGQRDNKGYRTVIRSLLKVDDIFGAEEIYKVWESLSLEFDI 342
Query: 335 RVTNVMIGAYAKEGRLENAEEL------KERARRRGADPNAKTW 372
R+ ++ Y + G E AE+L K+R + P + W
Sbjct: 343 RIPTMLASGYRERGMTEKAEKLINSKTIKDRKMNKPVTPLLEQW 386
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 62 LKKLRDRKLYYPALKLSENM-EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS 120
+K LRD + AL++SE M EKR + D A L L V G++ AE YF ++PE
Sbjct: 399 IKNLRDSNQFSKALQVSEWMGEKRVCDLYSEDYAARLYLTENVLGLEKAEKYFENIPENM 458
Query: 121 KNHLTYGSLLNCYCK--ELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
K++ Y +LL+ Y K + + E +L +M+E N+ S+ N ++ +YA E +
Sbjct: 459 KDYSVYVALLSSYAKSDKNLENMVEEILREMEENNVDPDSITVNYVLKVYAAASKVEAME 518
Query: 179 AIIQ----EMKASSIMPDSYTYNVW 199
++ EM + +N+W
Sbjct: 519 MFMRHWAVEMYGNVAGCKREVHNLW 543
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 107/237 (45%), Gaps = 37/237 (15%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIE--- 217
++ LM LY + G+ E++ I K + D+ Y +R+L V+DI GAE + +
Sbjct: 275 YDHLMKLYGEAGNREEVLRIWNLYKMNIGQRDNKGYRTVIRSLLKVDDIFGAEEIYKVWE 334
Query: 218 --EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERAL--KELENRNAHRDLSAYQFLITL 273
++ D R+ + LAS Y E G+ EKAE+ + K +++R ++ ++ L+
Sbjct: 335 SLSLEFDIRIP------TMLASGYRERGMTEKAEKLINSKTIKDRKMNKPVTP---LLEQ 385
Query: 274 YGQTGNLSEVYRIWRSLRLA--FPNTANIS---------------YLNMIQVLVNLKDLP 316
+G S++ + ++LR + F +S Y + + N+ L
Sbjct: 386 WGDQMKPSDLKCLIKNLRDSNQFSKALQVSEWMGEKRVCDLYSEDYAARLYLTENVLGLE 445
Query: 317 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGR-LEN-AEELKERARRRGADPNAKT 371
AEK F+ Y + V ++ +YAK + LEN EE+ DP++ T
Sbjct: 446 KAEKYFENIPENMKDYSVYVA--LLSSYAKSDKNLENMVEEILREMEENNVDPDSIT 500
>gi|148906608|gb|ABR16456.1| unknown [Picea sitchensis]
Length = 600
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 125/452 (27%), Positives = 208/452 (46%), Gaps = 9/452 (1%)
Query: 37 VSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENME-KRGMNKTVSDQAI 95
+ + L Q+L + + EV T LR+R+++ LK+S+ +E K+ KT D A
Sbjct: 144 IDLPSSLEQWLADGNVLTRREVVITFVHLRNRRMFKRLLKVSDWLEGKKPFKKTERDYAS 203
Query: 96 HLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLG 155
LD++ K+ GI E YF +P + YG+LL Y EKAE + +KMK
Sbjct: 204 RLDVITKILGIFKGEKYFASIPSDMRGQRAYGTLLANYSSTCNVEKAEEIFKKMKAEGFS 263
Query: 156 FSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERV 215
++ +N L+ LY + +KI +++ M+ + P +TY + + + DI G E+V
Sbjct: 264 LTAFEYNQLLLLYKRL-DKKKIQDVLKMMEDEGVKPTIFTYKILIDVKGWMGDIGGMEQV 322
Query: 216 IEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYG 275
E MK + + D T LA Y+ AGL EKAE LKELEN + S + L+ LY
Sbjct: 323 AENMKSED-IEMDSGTLELLARHYIRAGLAEKAEVVLKELENVSLKDKRSRLKMLLPLYA 381
Query: 276 QTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 335
+ G +EV RIW+ AFP Y + L + AE F++ + +
Sbjct: 382 ELGKPTEVERIWKDFE-AFPALRLDEYATGVVAWGKLGQIEKAEITFEKLLNSGKKLSAK 440
Query: 336 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 395
N ++ YA L +EL +R G W+ ++ G+++ A L KA
Sbjct: 441 HYNALLNVYADHHLLLKGKELVKRMSDNGCTIEPPIWDALIRLHVNAGELEKADSILFKA 500
Query: 396 IDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 455
+ + W T+ T + + + DV AE + +++A F L+++Y
Sbjct: 501 CNQKQLRPKYW-----TMVTILEKYAERGDVANAEKIFDRMRQAGYTGSAGAFASLLKSY 555
Query: 456 AAAGRTSPVMLRRLKMEKVEVSEASKKLLEAI 487
A A + R+K +K+ ++ L+E +
Sbjct: 556 ANARVPAYGFRERMKADKIYLNGRLNSLMEQV 587
>gi|297803972|ref|XP_002869870.1| hypothetical protein ARALYDRAFT_354609 [Arabidopsis lyrata subsp.
lyrata]
gi|297315706|gb|EFH46129.1| hypothetical protein ARALYDRAFT_354609 [Arabidopsis lyrata subsp.
lyrata]
Length = 480
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 190/377 (50%), Gaps = 3/377 (0%)
Query: 24 ALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEK 83
LY R+ G +S+ L+++ K E+ +K+L K + AL++S M
Sbjct: 37 GLYKRISPLGDPKISIVPVLDEWRGEGNYTSKEELRGMIKELIKYKRFVHALEVSRWMSD 96
Query: 84 RGMNK-TVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKA 142
R +++D ++L+++V G+ AE +F ++P+ K + SLL+CY +E EKA
Sbjct: 97 RMFFPLSLTDFGTRINLISRVCGLGEAEVFFENIPKDMKGIAVFSSLLSCYAREKSAEKA 156
Query: 143 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 202
L+E MKE + + +N +M +Y + K+ ++ EM+ + + D +T ++ + A
Sbjct: 157 AKLVEAMKEAGVSMDTRCYNLMMNMYYQMNVHGKLDDLMLEMEQNGVSFDQFTLSIRLSA 216
Query: 203 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN-RNAH 261
AA ++I G E+ IE++ A DWT +S A+ +++ L ++A LK+ E N
Sbjct: 217 YAAASNIEGIEKTIEKISSMSETAIDWTIYSAAANAFLKVELIDEATMMLKKCEEFVNED 276
Query: 262 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 321
A+ L+ LYG+TG ++ R+W + N Y MI + D+ EK
Sbjct: 277 SGNEAFHTLLKLYGETGRKEDLSRVWLRFKEE-RKVFNSGYKIMISSALKFGDIELVEKV 335
Query: 322 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 381
F +WES +YD R+ N++I Y ++ E AE L ++A P + ++ YL
Sbjct: 336 FNQWESEKLSYDFRIPNLLINFYCEKDLTEKAELLLKKAEGNRVSPPMDAYICLANIYLE 395
Query: 382 NGDMKLAVDCLEKAIDT 398
++ A + +E+A+ T
Sbjct: 396 GDEISKATEAIERAVST 412
>gi|18415979|ref|NP_568214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75165070|sp|Q94B59.1|PP372_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g09450, mitochondrial; Flags: Precursor
gi|14596093|gb|AAK68774.1| putative protein [Arabidopsis thaliana]
gi|27311913|gb|AAO00922.1| putative protein [Arabidopsis thaliana]
gi|332004012|gb|AED91395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 409
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 161/296 (54%), Gaps = 4/296 (1%)
Query: 57 EVGDTLKKLRDRKLYYPALKLSENMEKRGMNK-TVSDQAIHLDLVAKVQGIDAAENYFVD 115
E+ + K+LR + Y AL+++E M + +K + +D A +DL++KV GIDAAE YF
Sbjct: 89 ELREISKELRRTRRYKHALEVTEWMVQHEESKISDADYASRIDLISKVFGIDAAERYFEG 148
Query: 116 LPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELN-LGFSSMPFNSLMTLYAKTGHP 174
L SK TY SLL+ Y TE+AEAL +++ E + L F ++ +N +MTLY G
Sbjct: 149 LDIDSKTAETYTSLLHAYAASKQTERAEALFKRIIESDSLTFGAITYNEMMTLYMSVGQV 208
Query: 175 EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSN 234
EK+P +I+ +K + PD +TYN+W+ + AA +I +++EEM+ D W + +
Sbjct: 209 EKVPEVIEVLKQKKVSPDIFTYNLWLSSCAATFNIDELRKILEEMRHDASSNEGWVRYID 268
Query: 235 LASIYVEAGLFEKAERALK-ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 293
L SIY+ + AE L E E + R+ Y FL+ L+ GN + +IW+SLR
Sbjct: 269 LTSIYINSSRVTNAESTLPVEAEKSISQREWITYDFLMILHTGLGNKVMIDQIWKSLRNT 328
Query: 294 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEG 348
++ SY+ ++ + L L AE+ +W ES +D ++ A+ G
Sbjct: 329 NQILSSRSYICVLSSYLMLGHLREAEEIIHQWKESKTTEFDASACLRILNAFRDVG 384
>gi|21592522|gb|AAM64472.1| unknown [Arabidopsis thaliana]
Length = 409
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 161/296 (54%), Gaps = 4/296 (1%)
Query: 57 EVGDTLKKLRDRKLYYPALKLSENMEKRGMNK-TVSDQAIHLDLVAKVQGIDAAENYFVD 115
E+ + K+LR + Y AL+++E M + +K + +D A +DL++KV GIDAAE YF
Sbjct: 89 ELREISKELRRTRRYKHALEVTEWMVQHEESKISDADYASRIDLISKVFGIDAAERYFEG 148
Query: 116 LPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELN-LGFSSMPFNSLMTLYAKTGHP 174
L SK TY SLL+ Y TE+AEAL +++ E + L F ++ +N +MTLY G
Sbjct: 149 LHIDSKTAETYTSLLHAYAASKQTERAEALFKRIIESDSLTFGAITYNEMMTLYMSVGQV 208
Query: 175 EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSN 234
EK+P +I+ +K + PD +TYN+W+ + AA +I +++EEM+ D W + +
Sbjct: 209 EKVPEVIEVLKQKKVSPDIFTYNLWLSSCAATFNIDELRKILEEMRHDASSNEGWVRYID 268
Query: 235 LASIYVEAGLFEKAERALK-ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 293
L SIY+ + AE L E E + R+ Y FL+ L+ GN + +IW+SLR
Sbjct: 269 LTSIYINSSRVTNAESTLPVEAEKSISQREWITYDFLMILHTGLGNKVMIDQIWKSLRNT 328
Query: 294 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEG 348
++ SY+ ++ + L L AE+ +W ES +D ++ A+ G
Sbjct: 329 NQILSSRSYICVLSSYLMLGHLREAEEIIHQWKESKTTEFDASACLRILNAFRDVG 384
>gi|15217811|ref|NP_174123.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|12322989|gb|AAG51479.1|AC069471_10 hypothetical protein [Arabidopsis thaliana]
gi|332192782|gb|AEE30903.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 125/436 (28%), Positives = 211/436 (48%), Gaps = 24/436 (5%)
Query: 40 RQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGM-NKTVSDQAIHLD 98
RQQ NQ S RV +KKLRD AL++SE M K + N D A L
Sbjct: 60 RQQGNQVNPSHVRVI-------IKKLRDSDQSLQALQVSEWMSKEKICNLIPEDFAARLH 112
Query: 99 LVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTE-KAEALLEKMKELNLGFS 157
L+ V G++ AE +F +P+ ++ Y SLLN Y + T KAEA +KM++L L
Sbjct: 113 LIENVVGLEEAEKFFESIPKNARGDSVYTSLLNSYARSDKTLCKAEATFQKMRDLGLLLR 172
Query: 158 SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIE 217
+P+N++M+LY+ + EK+ ++ EMK + + D+ T N ++ +AV D++ E+ +
Sbjct: 173 PVPYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSAVCDVTEMEKFLN 232
Query: 218 EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL-SAYQFLITLYGQ 276
+ + + +W T ++A Y+ A KA + L+ E + L SAY L+ LYG+
Sbjct: 233 KWEGIHGIKLEWHTTLDMAKAYLRARSSGKAMKMLRLTEQLVDQKSLKSAYDHLMKLYGE 292
Query: 277 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 336
GN EV R+W+ + N Y +I+ L+ + D+ GAE+ +K WES +D R+
Sbjct: 293 AGNREEVLRVWKLYKSKIGERDNNGYRTVIRSLLKVDDIVGAEEIYKVWESLPLEFDHRI 352
Query: 337 TNVMIGAYAKEGRLENAEEL---KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
++ Y G E AE+L K RR P E + D ++ D+K + L
Sbjct: 353 PTMLASGYRDRGMTEKAEKLMNSKTIKDRRMNKPVTPLLEQWGD-QMKPSDLKCLIKNLR 411
Query: 394 KAIDTGRG-DGGKWVPSSETIRTFMRHF-------EQEKDVDGAEGFLEILKKAVDDLGV 445
+ + +W+ + ++ + E ++ AE + E + + + D V
Sbjct: 412 DSKQFSKALQVSEWMGEKQVCNLYLEDYAARLYLTENVLGLEEAEKYFENIPENMKDYSV 471
Query: 446 EVFEPLIRTYAAAGRT 461
V L+ +YA + +
Sbjct: 472 YV--ALLSSYAKSDKN 485
>gi|193806501|sp|Q9C7F1.2|PPR61_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g28020
Length = 566
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 125/436 (28%), Positives = 211/436 (48%), Gaps = 24/436 (5%)
Query: 40 RQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGM-NKTVSDQAIHLD 98
RQQ NQ S RV +KKLRD AL++SE M K + N D A L
Sbjct: 60 RQQGNQVNPSHVRVI-------IKKLRDSDQSLQALQVSEWMSKEKICNLIPEDFAARLH 112
Query: 99 LVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTE-KAEALLEKMKELNLGFS 157
L+ V G++ AE +F +P+ ++ Y SLLN Y + T KAEA +KM++L L
Sbjct: 113 LIENVVGLEEAEKFFESIPKNARGDSVYTSLLNSYARSDKTLCKAEATFQKMRDLGLLLR 172
Query: 158 SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIE 217
+P+N++M+LY+ + EK+ ++ EMK + + D+ T N ++ +AV D++ E+ +
Sbjct: 173 PVPYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSAVCDVTEMEKFLN 232
Query: 218 EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL-SAYQFLITLYGQ 276
+ + + +W T ++A Y+ A KA + L+ E + L SAY L+ LYG+
Sbjct: 233 KWEGIHGIKLEWHTTLDMAKAYLRARSSGKAMKMLRLTEQLVDQKSLKSAYDHLMKLYGE 292
Query: 277 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 336
GN EV R+W+ + N Y +I+ L+ + D+ GAE+ +K WES +D R+
Sbjct: 293 AGNREEVLRVWKLYKSKIGERDNNGYRTVIRSLLKVDDIVGAEEIYKVWESLPLEFDHRI 352
Query: 337 TNVMIGAYAKEGRLENAEEL---KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
++ Y G E AE+L K RR P E + D ++ D+K + L
Sbjct: 353 PTMLASGYRDRGMTEKAEKLMNSKTIKDRRMNKPVTPLLEQWGD-QMKPSDLKCLIKNLR 411
Query: 394 KAIDTGRG-DGGKWVPSSETIRTFMRHF-------EQEKDVDGAEGFLEILKKAVDDLGV 445
+ + +W+ + ++ + E ++ AE + E + + + D V
Sbjct: 412 DSKQFSKALQVSEWMGEKQVCNLYLEDYAARLYLTENVLGLEEAEKYFENIPENMKDYSV 471
Query: 446 EVFEPLIRTYAAAGRT 461
V L+ +YA + +
Sbjct: 472 YV--ALLSSYAKSDKN 485
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 34/192 (17%)
Query: 62 LKKLRDRKLYYPALKLSENM-EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS 120
+K LRD K + AL++SE M EK+ N + D A L L V G++ AE YF ++PE
Sbjct: 407 IKNLRDSKQFSKALQVSEWMGEKQVCNLYLEDYAARLYLTENVLGLEEAEKYFENIPENM 466
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
K++ Y +LL+ Y K + NLG + I
Sbjct: 467 KDYSVYVALLSSYAKS--------------DKNLG-------------------NMVDEI 493
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
++EM+ +++ PD T N ++ AA + I E + + + + T +A YV
Sbjct: 494 LREMEENNVDPDLITVNHVLKVYAAESKIQAMEMFMRRWGTEDGIKLERGTMIAMAKAYV 553
Query: 241 EAGLFEKAERAL 252
+AGL +K+ R +
Sbjct: 554 KAGLTKKSGRGV 565
>gi|224089975|ref|XP_002308888.1| predicted protein [Populus trichocarpa]
gi|222854864|gb|EEE92411.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 126/447 (28%), Positives = 210/447 (46%), Gaps = 21/447 (4%)
Query: 34 SSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVS-D 92
+SDVSV+ L++++ K + + E+ + + LR R+++ AL+LSE E + V D
Sbjct: 98 ASDVSVQSVLDKWVAEGKDLDRLEISNAMINLRKRRMFGRALQLSEWFEANKPQEFVERD 157
Query: 93 QAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLL-NCYCKELMTEKAEALLEKMKE 151
A LDL+AKV+G+ AE Y +P++ K + Y +LL NC +KAE + KM++
Sbjct: 158 YASRLDLIAKVRGLHKAEVYIDKIPKSFKGEVIYRTLLANCVVDH-NVKKAEEVFNKMRD 216
Query: 152 LNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISG 211
L + N L+ LY + +KI ++ M+ ++ P +TY + + ND++G
Sbjct: 217 LEFPITPFACNQLLLLYKRLDK-KKIADVLLLMEKENVKPSLFTYKILIDTKGQSNDMTG 275
Query: 212 AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 271
++++E MK +G + D T + +A YV GL EKAE LKE+E N A +F++
Sbjct: 276 MDQIVETMKAEG-IEPDIRTQAIMARHYVSGGLKEKAEAILKEMEGGNLEEHRWACRFML 334
Query: 272 TLYGQTGNLSEVYRIW----RSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES 327
LYG G EV R+W +S RL + I+ LK + AE F+
Sbjct: 335 PLYGALGKADEVSRVWKFCEKSPRLD-------ECMAAIEAWGRLKKIDEAEAVFELMSK 387
Query: 328 GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKL 387
R + ++ YA L ++L +R G TW+ Y+ G+++
Sbjct: 388 TWKKLSSRHYSTLLKVYANHKMLSKGKDLIKRMGDSGCRIGPLTWDALVKLYVEAGEVEK 447
Query: 388 AVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEV 447
A L KA+ K P + M + + D+ AE +++A +
Sbjct: 448 ADSILNKAVQQ-----NKIKPMYSSFLIIMERYATKGDIHNAEKMFHRMRQAGYQARIRQ 502
Query: 448 FEPLIRTYAAAGRTSPVMLRRLKMEKV 474
F+ LI+ Y A M RLK + +
Sbjct: 503 FQTLIQAYIIAKAPCYGMRERLKADGI 529
>gi|297806979|ref|XP_002871373.1| hypothetical protein ARALYDRAFT_487758 [Arabidopsis lyrata subsp.
lyrata]
gi|297317210|gb|EFH47632.1| hypothetical protein ARALYDRAFT_487758 [Arabidopsis lyrata subsp.
lyrata]
Length = 410
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 103/328 (31%), Positives = 170/328 (51%), Gaps = 4/328 (1%)
Query: 25 LYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENM-EK 83
L R+F+ S L +++ ++ E+ + K+LR + + AL+++E M +
Sbjct: 58 LKSRIFRLRLPKRSATTVLERWVGEGNQITINELREISKELRRTRRHKHALEVTEWMVQH 117
Query: 84 RGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAE 143
+ + +D A +DL++KV GIDAAE YF L +K TY SLL+ Y TE+AE
Sbjct: 118 EELKVSDADYASRIDLISKVFGIDAAERYFEGLHIDAKTTETYTSLLHAYAGSKQTERAE 177
Query: 144 ALLEKMKELN-LGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 202
AL +++ E + L F ++ +N +MTLY G EK+P +IQ +K + PD +TYN+W+ +
Sbjct: 178 ALFKRIIETDSLSFGAITYNEMMTLYMSVGQVEKVPEVIQVLKHKKVSPDIFTYNLWLSS 237
Query: 203 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK-ELENRNAH 261
AA +I R++EEM+ D W + NL SIY+ + AE E E +
Sbjct: 238 CAATFNIDELRRILEEMRHDASSNEGWVRYINLTSIYINSSRVTNAESTSPVEAEKSISQ 297
Query: 262 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 321
R+ Y FL+ L+ GN + +IW+SL ++ SY+ ++ + L L AE+
Sbjct: 298 REWITYDFLMILHTGLGNKVMIDQIWKSLGNTNQKLSSRSYICVLSSYLMLGHLREAEEI 357
Query: 322 FKEW-ESGCATYDIRVTNVMIGAYAKEG 348
+W ES +D ++ A+ G
Sbjct: 358 IHQWKESKTTEFDASACLRILNAFRDVG 385
>gi|125548508|gb|EAY94330.1| hypothetical protein OsI_16098 [Oryza sativa Indica Group]
Length = 430
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 172/339 (50%), Gaps = 2/339 (0%)
Query: 22 EEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENM 81
E+ L R+F+ + S L ++ + E+ + L Y AL+++E M
Sbjct: 75 EDDLRSRVFRLRLAKRSATAALERWAGEGRAASAAELRGIARDLSRAGRYKHALEVAEWM 134
Query: 82 EKRGMNK-TVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTE 140
+ + + +D + +DL+ +V G +AAE++F LP ++ Y +LL+ Y + MT+
Sbjct: 135 KTHHESDLSENDYGMRIDLITRVFGANAAEDFFEKLPACVQSLEAYTALLHSYARSKMTD 194
Query: 141 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 200
KAE L ++MK+ NL + + +N +MTLY G +K+P I +E+K PD +TYN+ +
Sbjct: 195 KAERLFKRMKDANLSMNILVYNEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYNLRI 254
Query: 201 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 260
A AA D+ G + +++EM +D W + NLA IYV+AG + +L E E + +
Sbjct: 255 SASAASMDLEGFKGILDEMSKDPNSNEGWKLYQNLAVIYVDAGQLVGSGNSLVEAEAKIS 314
Query: 261 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 320
R+ Y FL+ L+ GN + IW+S+ + + +Y+ ++ + L A +
Sbjct: 315 QREWITYDFLVILHTGLGNRDRIKDIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKDAGE 374
Query: 321 CFKEWE-SGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+W+ S +DI N + A+ G + A +E
Sbjct: 375 VIDQWQRSKAPEFDISACNRLFDAFLNAGFTDTANSFRE 413
>gi|296086986|emb|CBI33242.3| unnamed protein product [Vitis vinifera]
Length = 335
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 158/306 (51%), Gaps = 50/306 (16%)
Query: 4 PQRFGRTKNIAKRS---KKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGD 60
PQ R I+ R+ ++ + +LY+++ G + SV +L+ ++++ +V+ E+
Sbjct: 17 PQSLIRKNPISNRTYYTSRYGKISLYNKISPLGDPNTSVVPELDNWVQNGNKVWVAELQR 76
Query: 61 TLKKLRDRKLYYPALKLSENMEKRGMNK-TVSDQAIHLDLVAKVQGIDAAENYFVDLPET 119
+ LR RK + AL++SE M K+G+ + ++ A+ LDL+ +V+G +AE+YF L
Sbjct: 77 IIHDLRKRKRFSQALEISEWMSKKGICAFSPTEHAVQLDLIGRVRGFLSAESYFNSLQNH 136
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
K TYG+LLNCY ++ T+K+ + L+KMKE+ S + +N +M LY G EK+P
Sbjct: 137 DKTDKTYGALLNCYVRQRQTDKSLSHLQKMKEMGFASSPLTYNDIMCLYTNVGQHEKVPD 196
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
++ EMK S++ PD+++Y + + + A +DI G E V++EM+R +
Sbjct: 197 VLTEMKQSNVYPDNFSYRICINSYGAQSDIQGMENVLKEMERQPHI-------------- 242
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWR----------S 289
RD Y LI+LY GN +EV R+W S
Sbjct: 243 ----------------------RDGLGYNHLISLYASLGNKAEVLRLWSLEKNVEAFVGS 280
Query: 290 LRLAFP 295
LR+ P
Sbjct: 281 LRIVIP 286
>gi|125590560|gb|EAZ30910.1| hypothetical protein OsJ_14991 [Oryza sativa Japonica Group]
Length = 471
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 172/339 (50%), Gaps = 2/339 (0%)
Query: 22 EEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENM 81
E+ L R+F+ + S L ++ + E+ + L Y AL+++E M
Sbjct: 116 EDDLRSRVFRLRLAKRSATAALERWAGEGRAASAAELRGIARDLSRAGRYKHALEVAEWM 175
Query: 82 EKRGMNK-TVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTE 140
+ + + +D + +DL+ +V G +AAE++F LP ++ Y +LL+ Y + MT+
Sbjct: 176 KTHHESDLSENDYGMRIDLITRVFGANAAEDFFEKLPACVQSLEAYTALLHSYARSKMTD 235
Query: 141 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 200
KAE L ++MK+ NL + + +N +MTLY G +K+P I +E+K PD +TYN+ +
Sbjct: 236 KAERLFKRMKDANLSMNILVYNEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYNLRI 295
Query: 201 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 260
A AA D+ G + +++EM +D W + NLA IYV+AG + +L E E + +
Sbjct: 296 SASAASMDLEGFKGILDEMSKDPNSNEGWKLYQNLAVIYVDAGQLVGSGNSLVEAEAKIS 355
Query: 261 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 320
R+ Y FL+ L+ GN + IW+S+ + + +Y+ ++ + L A +
Sbjct: 356 RREWITYDFLVILHTGLGNRDRIKDIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKDAGE 415
Query: 321 CFKEWE-SGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+W+ S +DI N + A+ G + A +E
Sbjct: 416 VIDQWQRSKAPEFDISACNRLFDAFLNAGFTDTANSFRE 454
>gi|21740710|emb|CAD40831.1| OSJNBa0086B14.3 [Oryza sativa Japonica Group]
gi|116310079|emb|CAH67100.1| H0818E04.17 [Oryza sativa Indica Group]
Length = 430
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 172/339 (50%), Gaps = 2/339 (0%)
Query: 22 EEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENM 81
E+ L R+F+ + S L ++ + E+ + L Y AL+++E M
Sbjct: 75 EDDLRSRVFRLRLAKRSATAALERWAGEGRAASAAELRGIARDLSRAGRYKHALEVAEWM 134
Query: 82 EKRGMNK-TVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTE 140
+ + + +D + +DL+ +V G +AAE++F LP ++ Y +LL+ Y + MT+
Sbjct: 135 KTHHESDLSENDYGMRIDLITRVFGANAAEDFFEKLPACVQSLEAYTALLHSYARSKMTD 194
Query: 141 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 200
KAE L ++MK+ NL + + +N +MTLY G +K+P I +E+K PD +TYN+ +
Sbjct: 195 KAERLFKRMKDANLSMNILVYNEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYNLRI 254
Query: 201 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 260
A AA D+ G + +++EM +D W + NLA IYV+AG + +L E E + +
Sbjct: 255 SASAASMDLEGFKGILDEMSKDPNSNEGWKLYQNLAVIYVDAGQLVGSGNSLVEAEAKIS 314
Query: 261 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 320
R+ Y FL+ L+ GN + IW+S+ + + +Y+ ++ + L A +
Sbjct: 315 RREWITYDFLVILHTGLGNRDRIKDIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKDAGE 374
Query: 321 CFKEWE-SGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+W+ S +DI N + A+ G + A +E
Sbjct: 375 VIDQWQRSKAPEFDISACNRLFDAFLNAGFTDTANSFRE 413
>gi|449506017|ref|XP_004162629.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 608
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 122/428 (28%), Positives = 206/428 (48%), Gaps = 13/428 (3%)
Query: 8 GRTKNIAKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRD 67
G T+ K+S K L++ ++K +S +SV L++++ K + + E+ + LR
Sbjct: 127 GETELAEKKSSKWRPSELFNAIWK--ASVLSVPSALDKWVSEGKDLSRAEISLAMLHLRK 184
Query: 68 RKLYYPALKLSENMEKRG-MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTY 126
R+++ AL+ SE +E G + D A LDL+AKVQG+ AE+Y +P++ + + +
Sbjct: 185 RRMFGKALQFSEWLEANGQLEFNQRDYASRLDLIAKVQGLPKAESYIAKIPQSFQGEVIH 244
Query: 127 GSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKA 186
+LL Y +KAE + KMK+L + + ++ LY + K+ I+ M+
Sbjct: 245 RTLLANYVAANNVKKAEEVFNKMKDLEFPMTPFAHDQMLILYKRIDK-RKLADILSLMEK 303
Query: 187 SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE 246
++ P +TY + + A NDISG E+V++ MK +G + D +T S LA YV GL +
Sbjct: 304 ENVKPSPFTYKILIDAKGLCNDISGMEQVVDSMKAEG-IKPDVSTLSLLAKHYVSNGLKD 362
Query: 247 KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI 306
KA+ LK++E N+ + L+ LYG EV R+W ++ N + I
Sbjct: 363 KAKVILKDMEENNSKGSRLPCRILLPLYGALQMEDEVRRLW---KICEANPHMEESMAAI 419
Query: 307 QVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD 366
LK++ AEK F + R N M+ Y L +EL + G
Sbjct: 420 VAWGKLKNVQEAEKIFDRFVKTWKKPSTRHYNTMMNVYGGSKMLTKGKELVNQMAESGCR 479
Query: 367 PNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDV 426
+ TW+ Y+ G+++ A L KA+ + G K P + +T M H+ + DV
Sbjct: 480 MDELTWDAVVKLYVEAGEVEKADSFLVKAV---QKYGMK--PLFTSYKTLMDHYARRGDV 534
Query: 427 DGAEGFLE 434
AE +
Sbjct: 535 HNAEKIFD 542
>gi|413950397|gb|AFW83046.1| hypothetical protein ZEAMMB73_939845 [Zea mays]
Length = 453
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 176/384 (45%), Gaps = 39/384 (10%)
Query: 54 FKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVS-DQAIHLDLVAKVQGIDAAENY 112
++ +V K +R+ Y AL++ ME + S D A LDL+AK AE Y
Sbjct: 108 YRADVPSFHTKFSERR-YEQALEIFSWMESCSSLRLSSWDHAARLDLIAKAYSTSQAEEY 166
Query: 113 FVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTG 172
+ L + LL+CY E
Sbjct: 167 YNKLQSPATRQAASFPLLHCYVME----------------------------------RD 192
Query: 173 HPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTF 232
H EK+ ++I MK ++I + +YN+WM A A V+ + + V + M D V W+T+
Sbjct: 193 H-EKVLSVIDLMKRNNIHRNVLSYNLWMNACAEVSGVDSVQSVFQVMLNDETVKVGWSTY 251
Query: 233 SNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL 292
LA+I+ + GL +A+ L + E + + Y F++T Y + V R+W + +
Sbjct: 252 CTLANIFRKNGLNTEAQACLVKAEAKLSPTGRLGYSFVMTCYAALNDSDGVMRMWEASKS 311
Query: 293 AFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLEN 352
Y+ + + + D+ AE F +WE+GC +D+RV+NV++GAY + +E
Sbjct: 312 VPGRILTAYYMAAMSCSIKVGDISQAECIFGKWEAGCRKHDVRVSNVLLGAYVRNRWIEK 371
Query: 353 AEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSET 412
AE L +GA PN KTWEI + Y+++ M AV C++K + + W P E
Sbjct: 372 AERLHLHMLEKGACPNYKTWEILMEGYVQSRQMDKAVGCMKKGLSLLK--SCHWRPPVEL 429
Query: 413 IRTFMRHFEQEKDVDGAEGFLEIL 436
+ +HFE++ D A ++++L
Sbjct: 430 MEAIGKHFEEQGSADDAYRYIKVL 453
>gi|115458674|ref|NP_001052937.1| Os04g0450200 [Oryza sativa Japonica Group]
gi|113564508|dbj|BAF14851.1| Os04g0450200, partial [Oryza sativa Japonica Group]
Length = 292
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 144/269 (53%), Gaps = 1/269 (0%)
Query: 91 SDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMK 150
+D + +DL+ +V G +AAE++F LP ++ Y +LL+ Y + MT+KAE L ++MK
Sbjct: 7 NDYGMRIDLITRVFGANAAEDFFEKLPACVQSLEAYTALLHSYARSKMTDKAERLFKRMK 66
Query: 151 ELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDIS 210
+ NL + + +N +MTLY G +K+P I +E+K PD +TYN+ + A AA D+
Sbjct: 67 DANLSMNILVYNEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYNLRISASAASMDLE 126
Query: 211 GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 270
G + +++EM +D W + NLA IYV+AG + +L E E + + R+ Y FL
Sbjct: 127 GFKGILDEMSKDPNSNEGWKLYQNLAVIYVDAGQLVGSGNSLVEAEAKISRREWITYDFL 186
Query: 271 ITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE-SGC 329
+ L+ GN + IW+S+ + + +Y+ ++ + L A + +W+ S
Sbjct: 187 VILHTGLGNRDRIKDIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKDAGEVIDQWQRSKA 246
Query: 330 ATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+DI N + A+ G + A +E
Sbjct: 247 PEFDISACNRLFDAFLNAGFTDTANSFRE 275
>gi|9955532|emb|CAC05471.1| putative protein [Arabidopsis thaliana]
Length = 402
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 156/295 (52%), Gaps = 9/295 (3%)
Query: 57 EVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL 116
E+ + K+LR + Y AL+ E+ + +D A +DL++KV GIDAAE YF L
Sbjct: 89 ELREISKELRRTRRYKHALEHEES------KISDADYASRIDLISKVFGIDAAERYFEGL 142
Query: 117 PETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELN-LGFSSMPFNSLMTLYAKTGHPE 175
SK TY SLL+ Y TE+AEAL +++ E + L F ++ +N +MTLY G E
Sbjct: 143 DIDSKTAETYTSLLHAYAASKQTERAEALFKRIIESDSLTFGAITYNEMMTLYMSVGQVE 202
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
K+P +I+ +K + PD +TYN+W+ + AA +I +++EEM+ D W + +L
Sbjct: 203 KVPEVIEVLKQKKVSPDIFTYNLWLSSCAATFNIDELRKILEEMRHDASSNEGWVRYIDL 262
Query: 236 ASIYVEAGLFEKAERALK-ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF 294
SIY+ + AE L E E + R+ Y FL+ L+ GN + +IW+SLR
Sbjct: 263 TSIYINSSRVTNAESTLPVEAEKSISQREWITYDFLMILHTGLGNKVMIDQIWKSLRNTN 322
Query: 295 PNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEG 348
++ SY+ ++ + L L AE+ +W ES +D ++ A+ G
Sbjct: 323 QILSSRSYICVLSSYLMLGHLREAEEIIHQWKESKTTEFDASACLRILNAFRDVG 377
>gi|326504724|dbj|BAK06653.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326523789|dbj|BAJ93065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 155/290 (53%), Gaps = 2/290 (0%)
Query: 71 YYPALKLSENMEKRG-MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSL 129
Y AL+++E M+ + + +D + +DL+ KV G +AAE++F LP +K+ Y +L
Sbjct: 113 YKHALEVAEWMKTHHESDLSENDYGVRIDLITKVFGANAAEDFFEKLPPAAKSLEAYTAL 172
Query: 130 LNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
L+ Y + M +KAE L ++MK+ +L + +N +MTLY G +K+P + +E+K ++
Sbjct: 173 LHSYARSKMIDKAERLFQRMKDADLPIDVLVYNEMMTLYISVGELDKVPILAEELKRQNV 232
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
PD +TYN+ + A A D+ + +++EM +D W + NLASIYV+A +
Sbjct: 233 SPDLFTYNLRISASVASMDLEAFKGILDEMSKDPNSNEGWMLYRNLASIYVDASQLVSSG 292
Query: 250 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 309
+L E E + + R+ Y L+ L+ GNL V IW+S+++ + +Y+ ++
Sbjct: 293 NSLVEAEAKISQREWITYDLLVILHAGLGNLDRVKDIWKSMQMTAQRMTSRNYVCVLSAY 352
Query: 310 VNLKDLPGAEKCFKEWE-SGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+ L A + +W+ S +D+ N + A G + A+ +E
Sbjct: 353 LMCGQLKDAAEVVDQWQRSKVPEFDVSACNRLFDALLAAGFTDTADSFRE 402
>gi|326520694|dbj|BAJ92710.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 154/290 (53%), Gaps = 2/290 (0%)
Query: 71 YYPALKLSENMEKRG-MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSL 129
Y AL+++E M+ + + +D + +DL+ KV G +AAE++F LP +K+ Y +L
Sbjct: 113 YKHALEVAEWMKTHHESDLSENDYGVRIDLITKVFGANAAEDFFEKLPPAAKSLEAYTAL 172
Query: 130 LNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
L+ Y + M +KAE L ++MK+ +L + +N +MTLY G +K+P + +E+K ++
Sbjct: 173 LHSYARSKMIDKAERLFQRMKDADLPIDVLVYNEMMTLYISVGELDKVPILAEELKRQNV 232
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
PD +TYN+ + A A D+ + +++EM +D W + NLASIYV+A +
Sbjct: 233 SPDLFTYNLRISASVASMDLEAFKGILDEMSKDPNSNEGWMLYRNLASIYVDASQLVSSG 292
Query: 250 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 309
+L E E + + R+ Y L+ L+ GNL V IW+S+++ + +Y+ ++
Sbjct: 293 NSLVEAEAKISQREWITYDLLVILHAGLGNLDRVKDIWKSMQMTAQRMTSRNYVCVLSAY 352
Query: 310 VNLKDLPGAEKCFKEWE-SGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+ L A +W+ S +D+ N + A G + A+ +E
Sbjct: 353 LMCGQLKDAAGVVDQWQRSKVPEFDVSACNRLFDALLAAGFTDTADSFRE 402
>gi|224137686|ref|XP_002322619.1| predicted protein [Populus trichocarpa]
gi|222867249|gb|EEF04380.1| predicted protein [Populus trichocarpa]
Length = 472
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 128/455 (28%), Positives = 216/455 (47%), Gaps = 15/455 (3%)
Query: 29 LFKK--GSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENME-KRG 85
LFK + VSV L++++ + + + E+ + + LR R+L+ AL+LSE +E +
Sbjct: 8 LFKAIISAPGVSVHSVLDKWVAEGRDLDQLEISNAMFNLRKRRLFGRALQLSEWVEANKR 67
Query: 86 MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLL-NCYCKELMTEKAEA 144
+ D A LDL+AKV+G+ AE Y +P++ K + Y +LL NC +KA
Sbjct: 68 KDFDERDYASRLDLIAKVRGLQKAEVYIEKIPKSLKGEVIYRTLLANCVSAN-NAKKAVE 126
Query: 145 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 204
+ KMK+L L + +N L+ LY K +KI ++ M+ ++ P +TY + +
Sbjct: 127 VFNKMKDLELPITLFSYNQLLLLY-KRHDKKKIADVLLSMEKENVKPSLFTYILLIDTKG 185
Query: 205 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 264
NDI+G E++ E MK +G + D T + +A YV GL EKAE LKE+E N
Sbjct: 186 QSNDIAGMEQIAETMKAEG-IEPDIKTQAIMARHYVSGGLKEKAEIVLKEMEGGNLEEHR 244
Query: 265 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 324
A QF++ LYG G EV R+W+ + + P + I+ LK +P AE F+
Sbjct: 245 WACQFMLPLYGTLGKADEVSRLWKFCKKS-PRLDEC--MAAIEAWGQLKKIPEAEAVFEL 301
Query: 325 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 384
+ + ++ YA L ++L ++ G TW+ Y+ G+
Sbjct: 302 MSKTWKKLSSKHYSALLKVYANNKMLSKGKDLIKQMGDSGCRIGPLTWDALIKLYVEAGE 361
Query: 385 MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLG 444
++ A L KA+ + P + M + ++ D+ AE +++A
Sbjct: 362 VEKADSILNKAVQQNQMK-----PMFSSYMIIMEKYAKKGDIHNAEKMFHRMRQAGYQAR 416
Query: 445 VEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEA 479
+ F+ LI+ Y A M RLK + + ++A
Sbjct: 417 SKQFQTLIQAYINAKAPCYGMRERLKADGLFANKA 451
>gi|307136025|gb|ADN33879.1| DNA-binding protein [Cucumis melo subsp. melo]
Length = 608
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 125/468 (26%), Positives = 218/468 (46%), Gaps = 13/468 (2%)
Query: 8 GRTKNIAKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRD 67
G T+ K S+K + L + ++ + +SV L++++ + + ++ T+ LR
Sbjct: 127 GETELAEKISRKWVPSELNEAIWN--APALSVTSALDKWVSEGHELSRDDISSTMFGLRK 184
Query: 68 RKLYYPALKLSENMEKRG-MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTY 126
R+++ AL+ SE +E G + +D A HLDL+AKVQG+ AE Y +P + + Y
Sbjct: 185 RRMFGKALQFSEWLEASGQLEFNEADYASHLDLIAKVQGLHKAETYIAKIPNSFRGEAVY 244
Query: 127 GSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKA 186
+LL Y +KAE + +MK+L ++ ++ ++ LY + +I I+ M+
Sbjct: 245 RTLLANYVLANDVKKAEEVFNRMKDLEFPMTTFAYDQMLILYKRIDR-RRIADILSLMEK 303
Query: 187 SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE 246
++ P +TY + + A NDISG E+V++ MK +G + D T LA YV GL +
Sbjct: 304 ENVKPRPFTYKILIDAKGLSNDISGMEQVVDTMKAEG-IKLDVDTLLLLAKHYVLGGLKD 362
Query: 247 KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI 306
KA LK E N+ ++L+ LYG+ EV R+W + PN + I
Sbjct: 363 KAMPILKATEEVNSKGSRWPCRYLLPLYGELQMEDEVRRLW---EICEPNPNVEECMAAI 419
Query: 307 QVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD 366
LK++ AEK F + + MI Y L +EL + + G
Sbjct: 420 VAWGKLKNIQEAEKIFDRVVKTWKRLSTKHYSTMIKVYGDSKMLTKGKELVNQMAKSGCR 479
Query: 367 PNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDV 426
+ W+ Y+ G+++ A L KA+ + G K P ++ RT M H+ ++ DV
Sbjct: 480 IDPMIWDAVVKLYVEAGEVEKADSFLFKAV---KQYGMK--PLFDSYRTLMVHYARKGDV 534
Query: 427 DGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKV 474
+E ++++ F L++ Y A + M R+ + V
Sbjct: 535 HNSEKIFHKIRQSGYPTHFGQFVTLVQAYLNAKTPAYGMRERMMADNV 582
>gi|125532536|gb|EAY79101.1| hypothetical protein OsI_34208 [Oryza sativa Indica Group]
Length = 369
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 147/258 (56%), Gaps = 6/258 (2%)
Query: 229 WTTFSNLASIYVEAGLFEKAERALKELENRNAHR-DLSAYQFLITLYGQTGNLSEVYRIW 287
W +++ + + +++G+ E+A +A +E E + A + + AY FL+T+Y G SEV RIW
Sbjct: 111 WHSYATIGKVLMQSGMEERALQAFQESEKKIAKKSNRVAYGFLLTMYADLGMNSEVDRIW 170
Query: 288 RSLRLAFPNTA-NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAK 346
+ P +A N Y+ I VL+ + D+ GAEK ++EWES +D R+ N+++ AY K
Sbjct: 171 DVYKSKVPASACNSMYMCRISVLLKMNDIVGAEKAYEEWESKHVYHDSRLINLLLTAYCK 230
Query: 347 EGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKW 406
EG +E AE L ++ ++G P TW + Y + G A D +KA+ + + W
Sbjct: 231 EGLMEKAEALVDQFVKKGRTPFGNTWYKLAGGYFKVGQASKAADLTKKALASASNE---W 287
Query: 407 VPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVML 466
+P + + +F ++K+V+ AE + +L++ V +++ L++TY AG+ +L
Sbjct: 288 IPDLTNVLMSLNYFAEQKNVEAAEEMMSLLQRLVTPTR-DIYHGLLKTYVNAGKPVSDLL 346
Query: 467 RRLKMEKVEVSEASKKLL 484
RR+K + +E E ++K+L
Sbjct: 347 RRMKKDGMEADEETEKIL 364
>gi|449506007|ref|XP_004162627.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 125/446 (28%), Positives = 211/446 (47%), Gaps = 19/446 (4%)
Query: 34 SSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRG-MNKTVSD 92
+ D SV L +++ ++ + ++ T+ LR R+++ AL+ SE +E G + D
Sbjct: 153 APDFSVASALVKWVSQGNKLSRDDISSTMISLRRRQMFRKALQFSEWLEANGQLEFNERD 212
Query: 93 QAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKEL 152
A + L+AKVQG+ AE+Y +P++ + + + +LL Y EKAE + K+K+L
Sbjct: 213 YASRVHLIAKVQGLHKAESYIAKIPKSFQGEVVHRALLANYVVANNVEKAEEVFNKIKDL 272
Query: 153 NLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA 212
S +N ++ LY K KI ++ M+ +I P +TY + + NDISG
Sbjct: 273 EFPMSIFAYNQMLVLYKKIDR-RKIADVLLLMEKENIKPCPFTYKILIDGKGLSNDISGM 331
Query: 213 ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLIT 272
E+V++ MK +G + D +T S LA YV GL KA+ LKE+E N++ + L+
Sbjct: 332 EQVVDSMKAEG-IELDVSTLSLLAKHYVSCGLKVKAKAILKEIEETNSNGPQWLCRILLP 390
Query: 273 LYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF----KEWESG 328
YG+ EV R+W A P+ + I LK++ AEK F K W+
Sbjct: 391 FYGKLQMEDEVRRLWEICE-ANPHIEEC--MAAIVAWGQLKNVQEAEKIFDRVVKTWKKL 447
Query: 329 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 388
A R ++M+ Y L +E+ + G + T Y+ G+++ A
Sbjct: 448 SA----RHYSIMMNVYRDSKMLTKGKEVVNQMAESGCHIDLLTCNAIVKLYVEAGEVEKA 503
Query: 389 VDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVF 448
L KA+ + G K P + +T M H+ + DV AE + ++++ + F
Sbjct: 504 DSFLVKAV---KKYGMK--PLFTSYKTLMDHYARRGDVHNAEKIFDKMRQSSYIPRLGQF 558
Query: 449 EPLIRTYAAAGRTSPVMLRRLKMEKV 474
LI+ Y A + M R+ +KV
Sbjct: 559 GTLIQAYVNAKTPAYGMRERMMADKV 584
>gi|449437710|ref|XP_004136634.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
gi|449506005|ref|XP_004162626.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 606
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 124/446 (27%), Positives = 205/446 (45%), Gaps = 17/446 (3%)
Query: 34 SSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRG-MNKTVSD 92
+S +SV L++++ + ++ T+ LR R+++ AL+ SE +E G + +D
Sbjct: 147 ASGLSVSSALDKWVSEGNELSWDDISSTMMSLRRRRMFGKALQFSEWLEASGQLEFNEND 206
Query: 93 QAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKEL 152
A LDL+AKVQG+ AE+Y +P++ + + Y +LL Y KAE + KMK+L
Sbjct: 207 YASRLDLIAKVQGLHKAESYIAKIPKSFQGEVMYRTLLANYVAANNVNKAEEVFNKMKDL 266
Query: 153 NLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA 212
++ +N ++ LY K KI ++ M+ ++ P +TY + + A DISG
Sbjct: 267 EFPMTTFAYNQVLVLY-KRNDRRKIADVLLLMEKENVKPSPFTYKILIDAKGLSKDISGM 325
Query: 213 ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLIT 272
E+V++ MK +G + D LA YV GL +KA+ LKE+E N+ + L+
Sbjct: 326 EQVVDTMKAEG-IELDVFALCLLAKHYVSCGLKDKAKATLKEMEEINSKGSRWPCRLLLP 384
Query: 273 LYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF----KEWESG 328
LYG+ EV R+W A P+ + I LK++ AEK F K W
Sbjct: 385 LYGELEMEDEVRRLWEICE-ANPHIEEC--MAAIVAWGKLKNIHEAEKIFDKVVKTWPKK 441
Query: 329 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 388
+ T MI Y L +EL + G + W+ Y+ G+++ A
Sbjct: 442 KISTKHYCT--MIKVYGDCKMLTKGKELVNQMAESGYSIDPLAWDAVVKLYVEAGEVEKA 499
Query: 389 VDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVF 448
L KA+ P + RT M H+ + DV AE ++++ F
Sbjct: 500 DTFLVKAVKKYEMR-----PLYCSYRTLMNHYARRGDVHNAEKIFYKMRQSGYGPWFNQF 554
Query: 449 EPLIRTYAAAGRTSPVMLRRLKMEKV 474
E LI+ Y + + M R+ +K+
Sbjct: 555 ETLIQAYVNSKTPAYGMRERMMADKL 580
>gi|255581582|ref|XP_002531596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528792|gb|EEF30799.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 300
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 152/260 (58%), Gaps = 3/260 (1%)
Query: 15 KRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPA 74
+R K +L + LY R+ G VS+ L+Q+++ K V K ++ +K+LR K Y A
Sbjct: 42 ERGKDNLNQ-LYRRISPVGDPKVSIVPILDQWIEEGKSVNKDQLQVFIKELRYCKRYTHA 100
Query: 75 LKLSENM-EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCY 133
L++S M +KR T D AI LDL++KV GI+ AE YF ++P+ K Y +LLNCY
Sbjct: 101 LEISMWMSDKRYFALTSRDVAIRLDLMSKVLGIEQAEKYFENVPQKLKVLEVYNALLNCY 160
Query: 134 CKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDS 193
+KAEA+++ M++L ++ +N ++ L+ +TG+ +K+ A++ EM+ + I D
Sbjct: 161 AYAKSVDKAEAVMQNMRDLGFAGKTLTYNVMLNLHYQTGNFKKLEALMLEMEENGIAYDR 220
Query: 194 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 253
+T + + A AA+ DI E+++ M+ D V DW ++ +A+ Y +AGL +KA LK
Sbjct: 221 FTLGIQLSAYAAICDIQRMEKIMSRMESDANVVTDWCNYAIVANGYRKAGLMDKALEMLK 280
Query: 254 ELENR-NAHRDLSAYQFLIT 272
+ E + SAY FL+T
Sbjct: 281 KSEGLITGKKRSSAYNFLLT 300
>gi|297835552|ref|XP_002885658.1| hypothetical protein ARALYDRAFT_899047 [Arabidopsis lyrata subsp.
lyrata]
gi|297331498|gb|EFH61917.1| hypothetical protein ARALYDRAFT_899047 [Arabidopsis lyrata subsp.
lyrata]
Length = 737
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 171/331 (51%), Gaps = 10/331 (3%)
Query: 30 FKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENM-EKRGMNK 88
+K + +V +Q Q + K++ V ++ LRD + AL++S M ++ N
Sbjct: 32 LEKKAEITTVLEQWRQQQEQGKQLNPSLVRGVVENLRDSQRCREALEVSNWMIVQKICNL 91
Query: 89 TVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEK 148
D L+ V G++ A N+ +PE +N Y SLL+ Y + +KAE+ +K
Sbjct: 92 IPEDFTTRFHLIENVFGLEEAGNFVESIPENLRNESIYNSLLSSYVRRNDLDKAESTFKK 151
Query: 149 MKELNLGFSSMPFNSLMTLYAKTGHPE--KIPAIIQEMKASSIMPDSYTYNVWMRALAAV 206
M+EL L + P+NS+ +LY + H K+ I++EMK S+I D T N +R A V
Sbjct: 152 MRELGLLLRASPYNSMTSLYRRIPHGNRCKVDEILREMKESNIKLDRDTVNNALRVYADV 211
Query: 207 NDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSA 266
I+ E+ + E +G DW T ++A Y+ +G KA+ L+ E RD +
Sbjct: 212 THIATMEKFLAEW--EGNTPLDWLTRLDMAKAYLRSGFKGKAKEMLRRTEE---LRDPKS 266
Query: 267 YQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC-FKEW 325
Y+ L+ LYG+ G +VYR+W L N + +I L+ L D+ GAE+ +KEW
Sbjct: 267 YEELMRLYGEAGGRKDVYRVW-DLYKKLSKKDNEGFRALIGSLLKLDDINGAEEFYYKEW 325
Query: 326 ESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
E +D+R+ +++ +Y ++G +E A++L
Sbjct: 326 ECSGLPFDVRIPTMLVSSYREKGMVEKADKL 356
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/355 (30%), Positives = 171/355 (48%), Gaps = 48/355 (13%)
Query: 16 RSKKHLEEALYDRLFK---KGSSDVSVRQQLNQFLKSKKRVFK-WEVGDTLKKLRDRKLY 71
R K +E+A D+L K K V L + L+ K V K E+ D +K L D +
Sbjct: 345 REKGMVEKA--DKLIKEIMKNEESVKPITPLLESLERKGNVVKPSELRDLIKNLCDSNQF 402
Query: 72 YPALKLSENME-KRGMNKTVSDQAIHLDLVAKVQGIDAAENYFV-DLPETSKNHLTYGSL 129
Y AL+ S+ M K N D A L ++ V G + AE +F +PE K+ YG+L
Sbjct: 403 YKALEASKWMSTKTSFNLFPQDYAARLHMIENVLGFEEAEKFFERSIPENMKDDYVYGTL 462
Query: 130 LNCYCKELMT-EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS 188
L+CY K T +KAEA+ EKM +L PFNS+++LY++ G EK+ +I +MK +
Sbjct: 463 LSCYAKSHKTLDKAEAIFEKMGDLGFLSKPSPFNSMISLYSQLGKREKVENLISKMKCMN 522
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
I PDS T N +R A DI + +++ KR+ + A+ T + ++ A +E+A
Sbjct: 523 IEPDSLTMNNVLRMYADETDI----KTMDKYKREW-INAEKNTKLEMRTMVAMANAYERA 577
Query: 249 ERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW--------RSLRLAFPNTANI 300
LK +E T + +EV+R+W R+ ++ N
Sbjct: 578 GLLLKAIE-------------------ITRSKNEVHRLWNEYKEKEKRNYKIDDANLCKC 618
Query: 301 -------SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEG 348
Y ++I L+ L DL GAE+ + EWE ++ R+ ++I Y KEG
Sbjct: 619 RSAVGDEEYQSVISSLLKLDDLKGAEEIYGEWEPEGPEFNTRIPCLIISRYCKEG 673
>gi|296090465|emb|CBI40661.3| unnamed protein product [Vitis vinifera]
Length = 287
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/219 (36%), Positives = 125/219 (57%), Gaps = 1/219 (0%)
Query: 25 LYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKR 84
L R+FK SV L ++L +V E+ + K+LR + Y AL++SE M
Sbjct: 53 LKSRIFKLRLPKRSVTNVLQRWLGEGNQVHISELRNISKELRRAQRYKHALEISEWMVSH 112
Query: 85 G-MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAE 143
+ SD A+ +DL+ +V GIDAAE YF LP +K TY +LL+ Y + EKAE
Sbjct: 113 DEFELSDSDNAVRIDLMTRVFGIDAAERYFEGLPSAAKTSETYTALLHSYAGAKLAEKAE 172
Query: 144 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 203
L E++KE N+ + + +N +MTLY G EK+ +++E+K ++PD +TYN+W+ +
Sbjct: 173 ELYERIKESNVPLNILLYNEMMTLYMSVGQVEKVSLVVEELKRQKVVPDLFTYNLWVSSC 232
Query: 204 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
AA DI G R+++EM + W + NLA+IY+ A
Sbjct: 233 AATLDIDGVRRILKEMSNNSSANDGWVRYRNLANIYIMA 271
>gi|356503391|ref|XP_003520493.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g80270, mitochondrial-like [Glycine max]
Length = 580
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 202/427 (47%), Gaps = 23/427 (5%)
Query: 55 KW-EVGDTLKKLRDRKLYYPALKLSENME-KRGMNKTVSDQAIHLDLVAKVQGIDAAENY 112
KW E G+ L + R RKL+ AL LSE +E K+ D A LDL+AK++G+ AE Y
Sbjct: 144 KWLEEGNELTRXRKRKLFGRALLLSEWLESKKEFEFIERDYASRLDLIAKLRGLHKAEVY 203
Query: 113 FVDLPETSKNHLTYGSLL-NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKT 171
+PE+ + Y +LL NC + +KAE + KMK+L+L + N L+ LY K
Sbjct: 204 IETIPESCSREIMYRTLLANCVSQN-NVKKAEEVFSKMKDLDLPITVFTCNELLFLY-KR 261
Query: 172 GHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTT 231
+KI ++ M+ I P ++Y++ + DI G +++++ MK G + D T
Sbjct: 262 NDKKKIADLLLLMENEKIKPSRHSYSILIDTKGQSKDIGGMDQIVDRMKAQG-IEPDINT 320
Query: 232 FSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 291
+ LA Y+ AGL +K E LK++E N ++ + L+ LY G + EV RIW +
Sbjct: 321 QAVLARHYISAGLQDKVETLLKQMEGENLKQNRWLCRILLPLYANLGKVDEVGRIW---K 377
Query: 292 LAFPNTANISYLNMIQVLVNLKDLPGAEKCF----KEWESGCATYDIRVTNVMIGAYAKE 347
+ N L I+ L + AEK F K+W+ T ++++ YA
Sbjct: 378 VCETNPRYDECLGAIEAWGKLNKIDEAEKVFEMMVKKWKLSSKT-----CSILLKVYANN 432
Query: 348 GRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWV 407
L ++L +R G TW+ Y++ G+++ A L+KA +
Sbjct: 433 EMLMKGKDLMKRIGDGGCRIGPLTWDTIVKLYVQTGEVEKADSVLQKA-----AQQSQMK 487
Query: 408 PSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLR 467
P T T + + + D+ +E +K+A ++++ L+ Y A + +
Sbjct: 488 PMFSTYLTILEQYAKRGDIHNSEKIFLRMKQADYTSKAKMYQVLMNAYINAKVPAYGIRD 547
Query: 468 RLKMEKV 474
RLK + +
Sbjct: 548 RLKADSI 554
>gi|357509403|ref|XP_003624990.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500005|gb|AES81208.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 623
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/443 (25%), Positives = 212/443 (47%), Gaps = 22/443 (4%)
Query: 38 SVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENME-KRGMNKTVSDQAIH 96
++ L ++++ K + + E+ T+ LR RK+Y AL+LSE +E K+ + D A
Sbjct: 171 TIYTALEKWVEDGKELSREEISLTMINLRRRKIYLKALQLSEWLESKKHLEFVERDYASQ 230
Query: 97 LDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLL-NCYCKELMTEKAEALLEKMKELNLG 155
LDL+AK+ G+ AE Y +PE+ + + Y +LL NC + + +KAE + KMK+L
Sbjct: 231 LDLIAKLHGLHKAEVYIEKIPESFRGEIIYRTLLANCVTQNNL-KKAEEIFNKMKDLEFP 289
Query: 156 FSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERV 215
+ N L+ LY +T +KI ++ M+ ++ P T+ + + NDI G +++
Sbjct: 290 LTPFACNQLLLLYKRTDK-KKIADVLLLMEQENVKPSPLTFKILIDVKGQSNDIDGMDQI 348
Query: 216 IEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYG 275
+++M+ +G + D T + L Y+ G +KA+ LKE+E N + + L+ LY
Sbjct: 349 VDQMRAEG-IEPDNYTKAVLVGHYISGGHDDKAKMLLKEMEGENLKENRWVCRLLLALYA 407
Query: 276 QTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF----KEWESGCAT 331
+ G EV R+W+ P+ + + I+ LK + AE F ++W+
Sbjct: 408 KLGMADEVGRVWKVCE-TRPSVEDC--VAAIEAWGKLKKIDEAEAVFEVMARKWK----- 459
Query: 332 YDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDC 391
+ +V++ YA L ++L +R +G TW Y++ G+++ A
Sbjct: 460 LTSKNCSVLLNVYANNKMLTKGKDLIKRMAHKGCRIGPLTWNALVKLYVQAGEVEKADSV 519
Query: 392 LEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPL 451
L+KAI P + T + + + D+ +E +K+A ++ ++ L
Sbjct: 520 LQKAIQQ-----SPVRPIFSSYNTLLEEYSKRGDIHNSEKIFYRMKQAGYISRLKQYQIL 574
Query: 452 IRTYAAAGRTSPVMLRRLKMEKV 474
I Y A + + RLK + V
Sbjct: 575 IEAYRRANVPAYGIRDRLKADNV 597
>gi|125575301|gb|EAZ16585.1| hypothetical protein OsJ_32057 [Oryza sativa Japonica Group]
Length = 400
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/465 (25%), Positives = 203/465 (43%), Gaps = 86/465 (18%)
Query: 26 YDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKR- 84
Y L GSS+ S N L ++ V K EV +K L R+ + AL+LS M +R
Sbjct: 11 YKDLKSMGSSNNS----FNGALAEERHVAKPEVQSIIKYLCRRRRFSQALQLSMWMTERL 66
Query: 85 GMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEA 144
++ + D A L+L+ KV G+D A YF +P+ K YGS
Sbjct: 67 HLHLSPGDVANRLELITKVYGLDRAVEYFDSMPDQLKQQQCYGS---------------- 110
Query: 145 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 204
L+ YA+ EK + ++M+ M SY YNV MR
Sbjct: 111 -------------------LLKCYAEANCVEKAEELFEKMRGMG-MASSYAYNVMMR--- 147
Query: 205 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 264
+Y++ G E+ + +E D+
Sbjct: 148 ---------------------------------LYLQNGQVERVHSMHQAMEESGIVPDV 174
Query: 265 SAYQFLITLYGQTGNLSEVYRIWRSLR-----LAFPNTANISYLNMIQVLVNLKDLPGAE 319
S L+ + + L Y + ++ L N+ N Y+ I VL+ + D+ GAE
Sbjct: 175 STTHTLVAVLRKKKTLVAAYVVAEDIKAIENVLEKANSCNSMYMCRIGVLLKMNDMVGAE 234
Query: 320 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 379
K ++EWES +D R+ N+++ AY KEG ++ AE L ++ ++G P A T + Y
Sbjct: 235 KAYEEWESKHVYHDSRLINLLVDAYCKEGLMDKAEALVDQFIKKGRMPFANTCYKLAGGY 294
Query: 380 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 439
+ G + A D +KA+ + + W+P + + +F ++K+V+ AE + +L++
Sbjct: 295 FKVGQVSKAADLTKKALASASNE---WIPDLTNVLMSLNYFAEQKNVEAAEEMMSLLQRL 351
Query: 440 VDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 484
V +++ L++TY AG+ +L R+K + +E E ++K+L
Sbjct: 352 VTPTR-DIYHGLLKTYVNAGKPVSDLLHRMKKDGMEADEETEKIL 395
>gi|224125312|ref|XP_002329774.1| predicted protein [Populus trichocarpa]
gi|222870836|gb|EEF07967.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 159/345 (46%), Gaps = 73/345 (21%)
Query: 116 LPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
+P+ K + Y +LLNCY +E EKA A +K+ ++ + S + FN LM LY +T
Sbjct: 22 IPQKLKGFMVYTALLNCYAREKDVEKAVATFKKLTDIGVMRSPLVFNILMYLYFQT---- 77
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
DG V DW T+
Sbjct: 78 ----------------------------------------------DGEVVGDWNTYCVA 91
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLS-AYQFLITLYGQTGNLSEVYRIWRSLRLAF 294
A ++AG+ E A LK+LE + + S A+ L+ LY + GN E+YRIW+S
Sbjct: 92 ADRCLKAGIMEMAMTMLKKLEGQITEKTKSIAFDTLLKLYARKGNKDELYRIWKSDE-KR 150
Query: 295 PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAE 354
N Y++MI L+ L D+ AE FK+WES +Y RV N++I AY + LE A
Sbjct: 151 DKIYNKGYMSMISSLLMLDDIEAAEMMFKKWESRGLSYYFRVPNILINAYCRNNLLEKAG 210
Query: 355 ELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIR 414
L + A +G++P+A W Y L +G L V+ ++KAI G W P ET+
Sbjct: 211 SLIDHAMMKGSEPSADAW-----YSLASG--YLEVEAMKKAILVCPG----WKPIKETLA 259
Query: 415 TFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPL----IRTY 455
+ + H E + D + AE F+E+L+ +F P+ +RTY
Sbjct: 260 SCLDHLEGKGDQNKAEEFIELLRTE------NIFSPVAHNRLRTY 298
>gi|297739953|emb|CBI30135.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 114/449 (25%), Positives = 206/449 (45%), Gaps = 13/449 (2%)
Query: 29 LFKK--GSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEK-RG 85
LFK +SD + LN++ + K + + E+ T+ LR +++ AL+ SE ME+ +
Sbjct: 160 LFKAIMAASDQPIHSVLNKWDQEGKDMSRAEIAQTMLNLRKIRMFLKALQFSEWMEEHKK 219
Query: 86 MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEAL 145
++ D A +DL+AKV+G+ AE+Y +P++ + L Y +LL +KAE +
Sbjct: 220 LDMVERDYASRVDLIAKVRGLQKAEHYIEKIPKSFRGELVYRTLLANCVSTTNAKKAEEV 279
Query: 146 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 205
KMK+L ++ N L+ LY + +KI ++ M+ + P +TY + +
Sbjct: 280 FNKMKDLGFPITTFACNQLLLLYKRVDK-KKIADVLLLMEKEDVKPSLFTYGLLIDTKGQ 338
Query: 206 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 265
NDI+G E+++E MK +G + + S L YV GL EKAE LKE+E N +
Sbjct: 339 SNDITGMEQIVETMKAEG-IEPNLQVQSILVRHYVFGGLKEKAEAILKEMEGGNLKENRW 397
Query: 266 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 325
+ L+ Y G +V RIW ++ N ++ I+ LK + AE F +
Sbjct: 398 VCRVLLPPYAALGKADDVERIW---KVCESNPRLPEFVAAIEAYGKLKKVEEAEAIFNKM 454
Query: 326 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 385
+ + ++ YA L ++L ++ G TW+ Y+ G++
Sbjct: 455 SKTFKRLSSKHYSALLKVYADHKMLIKGKDLVKQMSDSGCRIGPLTWDALVKLYVEAGEV 514
Query: 386 KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGV 445
+ A L+KA+ P T M + + D+ +E ++++ +
Sbjct: 515 EKADKILQKAMQQ-----SPIKPMFSTYMAIMDQYAKRGDIHNSEKMFHQMRQSGYVSRL 569
Query: 446 EVFEPLIRTYAAAGRTSPVMLRRLKMEKV 474
F+ LI+ Y A + + R+K + +
Sbjct: 570 RQFQCLIQAYVNAKAPAYGIKERMKADNI 598
>gi|449506011|ref|XP_004162628.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 613
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 124/470 (26%), Positives = 219/470 (46%), Gaps = 16/470 (3%)
Query: 8 GRTKNIAKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRD 67
G T + K S K L + ++K + ++V L++++ K + + ++ + LR
Sbjct: 131 GETGLVEKISIKRAPSELLNVIWK--APGLTVSSALDKWVSEGKELSRDDISSAMLNLRK 188
Query: 68 RKLYYPALKLSENMEKRG-MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTY 126
++Y AL+ SE +E G ++ D A LDL+ K++G+ AENY +P++ + + Y
Sbjct: 189 CRMYGKALQFSEWLEANGKLDFVEKDYASRLDLIGKLRGLRMAENYIAKIPKSFQGEVVY 248
Query: 127 GSLL-NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
+LL NC +KAE + KMK+L ++ N L+ LY +T K+ I+ M+
Sbjct: 249 RTLLANCVIA-CNVQKAEEVFNKMKDLEFPITAFACNQLLLLYKRT-DKRKVADILLLME 306
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
++ P +TY + + NDI+G E+V++ MK +G + D +T S LA Y+ GL
Sbjct: 307 KENVKPSRFTYRILIDTKGLSNDITGMEQVVDTMKAEG-IELDVSTLSVLAKHYISGGLK 365
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
+KA+ LKE+E N+ + L+ LYG+ EV R+W + N +
Sbjct: 366 DKAKAILKEMEEINSEGSRWPCRILLPLYGELQMEDEVRRLW---EICGSNPHIEECMAA 422
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGR-LENAEELKERARRRG 364
I LK++ AEK F R + M+ Y ++ + L +E+ ++ G
Sbjct: 423 IVAWGKLKNIQEAEKIFDRVVKTGEKLSARHYSTMLNVYREDSKMLTKGKEVVKQMAESG 482
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 424
+ + T + Y+ G+++ A L K + + P T T M +
Sbjct: 483 SRMDPVTLDAVVKLYVEAGEVEKADSFLVKTVLQYKKK-----PMFTTYITLMDRYASRG 537
Query: 425 DVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKV 474
DV AE +++K + F+ LI+ Y A + M R+K + V
Sbjct: 538 DVPNAEKIFGMMRKYGYVGRLSQFQTLIQAYVNAKAPAYGMRERMKADSV 587
>gi|115482780|ref|NP_001064983.1| Os10g0501000 [Oryza sativa Japonica Group]
gi|113639592|dbj|BAF26897.1| Os10g0501000, partial [Oryza sativa Japonica Group]
Length = 451
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 116/469 (24%), Positives = 206/469 (43%), Gaps = 87/469 (18%)
Query: 27 DRLFKKGSSDVSVRQQLNQFLKS-----KKRVFKWEVGDTLKKLRDRKLYYPALKLSENM 81
D LF++ ++ R L+ L+ ++ V K EV +K L R+ + AL+LS M
Sbjct: 54 DSLFRRVAAAADPRLPLSPVLEQWCLAEERHVAKPEVQSIIKYLCRRRRFSQALQLSMWM 113
Query: 82 EKR-GMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTE 140
+R ++ + D A L+L+ KV G+D A YF +P+ K YGS
Sbjct: 114 TERLHLHLSPGDVANRLELITKVYGLDRAVEYFDSMPDQLKQQQCYGS------------ 161
Query: 141 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 200
L+ YA+ EK + ++M+ M SY YNV M
Sbjct: 162 -----------------------LLKCYAEANCVEKAEELFEKMRGMG-MASSYAYNVMM 197
Query: 201 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 260
R +Y++ G E+ + +E
Sbjct: 198 R------------------------------------LYLQNGQVERVHSMHQAMEESGI 221
Query: 261 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLR-----LAFPNTANISYLNMIQVLVNLKDL 315
D+S L+ + + L Y + ++ L N+ N Y+ I VL+ + D+
Sbjct: 222 VPDVSTTHTLVAVLRKKKTLVAAYVVAEDIKAIENVLEKANSCNSMYMCRIGVLLKMNDM 281
Query: 316 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 375
GAEK ++EWES +D R+ N+++ AY KEG ++ AE L ++ ++G P A T
Sbjct: 282 VGAEKAYEEWESKHVYHDSRLINLLVDAYCKEGLMDKAEALVDQFIKKGRMPFANTCYKL 341
Query: 376 SDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEI 435
+ Y + G + A D +KA+ + + W+P + + +F ++K+V+ AE + +
Sbjct: 342 AGGYFKVGQVSKAADLTKKALASASNE---WIPDLTNVLMSLNYFAEQKNVEAAEEMMSL 398
Query: 436 LKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 484
L++ V +++ L++TY AG+ +L R+K + +E E ++K+L
Sbjct: 399 LQRLVTPTR-DIYHGLLKTYVNAGKPVSDLLHRMKKDGMEADEETEKIL 446
>gi|225441211|ref|XP_002266581.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Vitis vinifera]
Length = 587
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 114/449 (25%), Positives = 206/449 (45%), Gaps = 13/449 (2%)
Query: 29 LFKK--GSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEK-RG 85
LFK +SD + LN++ + K + + E+ T+ LR +++ AL+ SE ME+ +
Sbjct: 123 LFKAIMAASDQPIHSVLNKWDQEGKDMSRAEIAQTMLNLRKIRMFLKALQFSEWMEEHKK 182
Query: 86 MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEAL 145
++ D A +DL+AKV+G+ AE+Y +P++ + L Y +LL +KAE +
Sbjct: 183 LDMVERDYASRVDLIAKVRGLQKAEHYIEKIPKSFRGELVYRTLLANCVSTTNAKKAEEV 242
Query: 146 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 205
KMK+L ++ N L+ LY + +KI ++ M+ + P +TY + +
Sbjct: 243 FNKMKDLGFPITTFACNQLLLLYKRVDK-KKIADVLLLMEKEDVKPSLFTYGLLIDTKGQ 301
Query: 206 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 265
NDI+G E+++E MK +G + + S L YV GL EKAE LKE+E N +
Sbjct: 302 SNDITGMEQIVETMKAEG-IEPNLQVQSILVRHYVFGGLKEKAEAILKEMEGGNLKENRW 360
Query: 266 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 325
+ L+ Y G +V RIW ++ N ++ I+ LK + AE F +
Sbjct: 361 VCRVLLPPYAALGKADDVERIW---KVCESNPRLPEFVAAIEAYGKLKKVEEAEAIFNKM 417
Query: 326 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 385
+ + ++ YA L ++L ++ G TW+ Y+ G++
Sbjct: 418 SKTFKRLSSKHYSALLKVYADHKMLIKGKDLVKQMSDSGCRIGPLTWDALVKLYVEAGEV 477
Query: 386 KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGV 445
+ A L+KA+ P T M + + D+ +E ++++ +
Sbjct: 478 EKADKILQKAMQQ-----SPIKPMFSTYMAIMDQYAKRGDIHNSEKMFHQMRQSGYVSRL 532
Query: 446 EVFEPLIRTYAAAGRTSPVMLRRLKMEKV 474
F+ LI+ Y A + + R+K + +
Sbjct: 533 RQFQCLIQAYVNAKAPAYGIKERMKADNI 561
>gi|414586983|tpg|DAA37554.1| TPA: hypothetical protein ZEAMMB73_139718 [Zea mays]
Length = 423
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 178/359 (49%), Gaps = 13/359 (3%)
Query: 13 IAKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYY 72
+ + +H + L R+F+ G + S L ++ + E+ + L + Y
Sbjct: 44 VVAATGEHDGDDLRSRIFRLGLAKRSATAALEKWSSEGRDAPTAELRRIARDLTRVRRYK 103
Query: 73 PALKLSENMEKRGMNK-TVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLN 131
AL++++ M+ + + +D + +DL+ KV G AAE++F LP +K+ Y +LL+
Sbjct: 104 HALEVADWMKTHHESDLSENDYGMRIDLITKVFGASAAEDFFEKLPPGAKSLEAYTALLH 163
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
Y + MT++AE L E+MK+ +L ++ +N +MTLY G K+ A+ +E+K ++ P
Sbjct: 164 SYGRSKMTDRAERLFERMKDASLPMDALVYNEMMTLYISVGELGKVEAVAEELKRQNVSP 223
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAAD--WTTFSNLASIYVEAG--LFEK 247
D +TYN+ A AA D+ G V++EM RD + + + W + +LAS+YV+AG L
Sbjct: 224 DLFTYNLRASAAAASMDLEGFRAVLDEMSRDPKSSTEGGWALYRDLASVYVDAGQLLGSV 283
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL-------RLAFPNTANI 300
++ E R + R+ Y FL+ L+ G + IWRS+ +
Sbjct: 284 NSPPVEAGEARISQREWITYDFLVILHAGLGRPERIRDIWRSMVATSQSQSQQQQRMTSR 343
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWE-SGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+Y+ ++ + L A + +W+ S +D+ N ++ A + G + A +E
Sbjct: 344 NYVCVVSSYLACGRLEDAGEVVDQWQRSKAPEFDVSACNRLLDALLRAGLADAAGRFRE 402
>gi|226528511|ref|NP_001143788.1| uncharacterized protein LOC100276555 [Zea mays]
gi|195627038|gb|ACG35349.1| hypothetical protein [Zea mays]
Length = 422
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 178/359 (49%), Gaps = 13/359 (3%)
Query: 13 IAKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYY 72
+ + +H + L R+F+ G + S L ++ + E+ + L + Y
Sbjct: 44 VVAATGEHDGDDLRSRIFRLGLAKRSATAALEKWSSEGRDAPAAELRRIARDLTRVRRYK 103
Query: 73 PALKLSENMEKRGMNK-TVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLN 131
AL++++ M+ + + +D + +DL+ KV G AAE++F LP +K+ Y +LL+
Sbjct: 104 HALEVADWMKTHHESDLSENDYGMRIDLITKVFGASAAEDFFEKLPAGAKSLEAYTALLH 163
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
Y + MT++AE L E+MK +L ++ +N +MTLY G K+ A+ +E+K ++ P
Sbjct: 164 SYGRSKMTDRAERLFERMKGASLPMDALVYNEMMTLYISVGELGKVEAVAEELKRQNVSP 223
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAAD--WTTFSNLASIYVEAG--LFEK 247
D +TYN+ A AA D+ G V++EM RD + + + W + +LAS+YV+AG L
Sbjct: 224 DLFTYNLRASAAAASMDLEGFRAVLDEMSRDLKSSTEGGWALYRDLASVYVDAGQLLGSV 283
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL-------RLAFPNTANI 300
++ E R + R+ Y FL+ L+ G + IWRS+ + +
Sbjct: 284 NSPPVEAGEARISQREWITYDFLVILHAGLGRPERIRDIWRSMVATSQSQSQSQQRMTSR 343
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWE-SGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+Y+ ++ + L A + +W+ S +D+ N ++ A + G + A +E
Sbjct: 344 NYVCVVSSYLACGRLEDAGEVVDQWQRSKAPEFDVSACNRLLDALLRAGLADAAGRFRE 402
>gi|226530081|ref|NP_001147602.1| DNA-binding protein [Zea mays]
gi|195612448|gb|ACG28054.1| DNA-binding protein [Zea mays]
Length = 622
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 118/450 (26%), Positives = 205/450 (45%), Gaps = 13/450 (2%)
Query: 39 VRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVS-DQAIHL 97
V L ++ K + E+ L LR R Y AL+L E ++K + + V D A HL
Sbjct: 169 VTSALEKWAKDGNAFDRGELYYVLLNLRKRHWYSKALELVEWVQKSQLFEFVERDYAAHL 228
Query: 98 DLVAKVQGIDAAENYFVDLPETSKNHLTYGSLL-NCYCKELMTEKAEALLEKMKELNLGF 156
DL AKV G+ AE +P + + + Y +LL NC + +K+E + +MK+L
Sbjct: 229 DLTAKVYGLHKAEQTIEKIPASCRGEIVYRTLLANCVSASNI-KKSEQVFNRMKDLGFPV 287
Query: 157 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
+ FN L+ LY + +KI ++ M+ + P +TY + + A +V DI E+VI
Sbjct: 288 TQFSFNQLLLLYKRLDR-KKIADVLAMMEKEDVKPSLFTYKILVDAKGSVGDIEAMEKVI 346
Query: 217 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 276
E M++D + D T + +A Y+ G EKAE LK +E + ++ +A + L+ L+
Sbjct: 347 ESMEKDS-IEPDLTFNATIARHYIFYGQREKAEALLKAMEGDDIQKNRAACKTLLPLHAF 405
Query: 277 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 336
GN V RIW++ NT ++ I+ L D+ AEK F++ T +
Sbjct: 406 LGNSDAVERIWKACE---DNTRVAESVSAIEAFGKLGDVEKAEKVFEDMLVHWKTLSSKF 462
Query: 337 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 396
N ++ YA L+ +EL +R A T + Y+ G+++ A + K
Sbjct: 463 YNALLKVYADHNLLDKGKELAKRMDENRVRFGAPTLDALVKLYVEAGEVEKAESLVHKL- 521
Query: 397 DTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYA 456
P T T + + ++ DV +E L+++ + +++ L+ Y
Sbjct: 522 ----SIQNHIKPIYNTYMTLLDSYSKKGDVRNSEKVFNKLRQSGYTGRIRMYQSLLHAYV 577
Query: 457 AAGRTSPVMLRRLKMEKVEVSEASKKLLEA 486
A + R+K + + + A L+ A
Sbjct: 578 HAKAPAYGFRERMKADNIFPNSAVSTLIAA 607
>gi|357439923|ref|XP_003590239.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479287|gb|AES60490.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 126/438 (28%), Positives = 202/438 (46%), Gaps = 24/438 (5%)
Query: 29 LFKK--GSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENME-KRG 85
LFK S +SV L+++++ K + + E+G L LR RK+Y AL+ + +E +
Sbjct: 143 LFKAIVSVSGLSVDSALDKWVEKGKELSRQEIGLALNSLRRRKMYGRALQALDWLESNKK 202
Query: 86 MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLL-NCYCKELMTEKAEA 144
+ T + A LDL+AK++G+ AE Y +P + + L Y +LL NC E + K E
Sbjct: 203 LEFTEKEYASKLDLIAKLRGLPKAEKYLEHVPNSFRGELLYRTLLANCASLENL-RKTEE 261
Query: 145 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 204
KM+EL ++ N L+ L K +KI ++ M+ ++ P SYTY + +
Sbjct: 262 TFNKMRELGFPVTAFACNQLL-LIYKKIDKKKIADVLLMMEKENVKPSSYTYKILIDVKG 320
Query: 205 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 264
NDI G +++E MK +G D T ++LA Y AGL EK E LKE+E N ++
Sbjct: 321 LSNDIDGMSQIVETMKAEG-CELDHLTRASLARHYAAAGLTEKTEAILKEIEGENLKENM 379
Query: 265 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK- 323
L+ LY G EV RIW+ + P + L I+ LK + AE F+
Sbjct: 380 WVCPTLLRLYAILGRADEVERIWKVCE-SKPRVEDC--LAAIEAWGRLKKIEEAEAVFEM 436
Query: 324 ---EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 380
+W+ Y+ ++ Y + L ++L + G TW+ Y+
Sbjct: 437 MSNKWKLTARNYE-----SLLKIYIRHKMLNKGKDLIKTMGDSGCTIGPTTWDALVSLYV 491
Query: 381 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 440
+ G+++ A L+KA+ K P T T M + + DV AE L++A
Sbjct: 492 QAGEVEKADTVLQKALQQ-----NKMKPMFTTFMTIMEQYAKRGDVHNAEKIFYRLRQAN 546
Query: 441 DDLGVEVFEPLIRTYAAA 458
+ F L + Y A
Sbjct: 547 YISRISPFHALAQAYKNA 564
>gi|297844450|ref|XP_002890106.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297335948|gb|EFH66365.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 594
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 203/441 (46%), Gaps = 11/441 (2%)
Query: 35 SDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENME-KRGMNKTVSDQ 93
S +SV L+++++ K + E + +LR R++Y AL+++E ++ + D
Sbjct: 138 SGLSVGSALDKWVEQGKDTSRTEFASAMLQLRKRRMYGRALQMTEWLDDNKQFEMKERDY 197
Query: 94 AIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELN 153
A LDL++KV+G+ E Y +PE+ + L Y +LL+ Y AEA+ KMK+L
Sbjct: 198 ASRLDLISKVRGLYKGEAYIETIPESFRGELVYRTLLSNYVATSNVRTAEAVFNKMKDLG 257
Query: 154 LGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAE 213
S+ N ++ LY + +KI ++ M+ ++ P+ TY + + NDI+G E
Sbjct: 258 FPLSTFTCNQMLILYKRV-DKKKIADVLLLMEKENLKPNLNTYKILIDTKGLSNDITGME 316
Query: 214 RVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITL 273
+++E MK +G V D + +A Y AGL EKAE+ LKE+E + + Y+ L+++
Sbjct: 317 QIVETMKSEG-VEPDLRARALIARNYASAGLKEKAEKVLKEMEGESLEENRHVYKDLLSV 375
Query: 274 YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYD 333
YG EV RIW ++ L I + + AE F++
Sbjct: 376 YGFLQRADEVTRIW---KICEEKPRYNESLAAILAFGKIDKVKEAEAVFEKMLKMSHRVS 432
Query: 334 IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
V +V++ Y + ++L ++ G + A T + YL G+++ A L
Sbjct: 433 SNVYSVLLRVYVDHKMVSEGKDLVKQMLDSGCNIGALTLDAVIKLYLEAGEVEKAESSLS 492
Query: 394 KAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIR 453
KAI + + P + M + + DV E + +K+ ++ LI+
Sbjct: 493 KAIQS-----KQIKPLMSSFMYVMGEYVRRGDVHNTEKIFQRMKQFGYQSRFRTYQALIQ 547
Query: 454 TYAAAGRTSPVMLRRLKMEKV 474
Y A + M R+K + +
Sbjct: 548 AYVNAKAPAYGMKDRMKADNI 568
>gi|125532538|gb|EAY79103.1| hypothetical protein OsI_34209 [Oryza sativa Indica Group]
Length = 479
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 113/469 (24%), Positives = 205/469 (43%), Gaps = 87/469 (18%)
Query: 27 DRLFKKGSSDVSVRQQLNQFLKS-----KKRVFKWEVGDTLKKLRDRKLYYPALKLSENM 81
D LF++ ++ R L+ L+ ++ + K E+ +K L R+ + AL+LS M
Sbjct: 82 DSLFRRVAAAADPRLPLSPVLEQWCLAEERPIAKPEIQSIIKYLCRRRRFSQALQLSMWM 141
Query: 82 EKR-GMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTE 140
+R ++ + D A L+L+ KV G+D A YF +P+ K YGS
Sbjct: 142 TERLHLHLSPGDVANRLELITKVHGLDRAVEYFDSMPDQLKQQQCYGS------------ 189
Query: 141 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 200
L+ YA+ EK + ++M+ M SY YNV M
Sbjct: 190 -----------------------LLKCYAEANCVEKAEELFEKMRGMG-MASSYAYNVMM 225
Query: 201 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 260
R +Y++ G E+ + +E
Sbjct: 226 R------------------------------------LYLQNGQVERVHSMHQAMEESGI 249
Query: 261 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLR-----LAFPNTANISYLNMIQVLVNLKDL 315
D+S L+ + + L Y + ++ L N+ N Y+ I VL+ + D+
Sbjct: 250 VPDVSTTHTLVAVLRKKKTLVAAYVVAEDIKAIENVLEKANSCNSMYMCRIGVLLKMNDM 309
Query: 316 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 375
GAEK ++EWES +D R+ N+++ AY KEG ++ AE L ++ ++G P A T
Sbjct: 310 VGAEKAYEEWESKHVYHDSRLINLLVDAYCKEGLMDKAEALVDQFIKKGRMPFANTCYKL 369
Query: 376 SDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEI 435
+ Y + G + A D +KA+ + +W+P + + +F ++K+V+ AE +
Sbjct: 370 AGGYFKVGQVSKAADLTKKALASA---SNEWIPDLTNVLMSLNYFAEQKNVEAAEEMASL 426
Query: 436 LKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 484
L++ + +++ L++TY AG+ +L R+K + +E E ++K+L
Sbjct: 427 LQRLITPTR-DIYHGLLKTYVNAGKPVSDLLDRMKKDGMEADEETEKIL 474
>gi|302798913|ref|XP_002981216.1| hypothetical protein SELMODRAFT_53460 [Selaginella moellendorffii]
gi|300151270|gb|EFJ17917.1| hypothetical protein SELMODRAFT_53460 [Selaginella moellendorffii]
Length = 463
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 179/398 (44%), Gaps = 22/398 (5%)
Query: 96 HLDLVAKVQGIDAAENYFVD-LPET-SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELN 153
HLDL +V ++AA+N+ + +P +K+ ++ Y + KA +L+ MKE N
Sbjct: 79 HLDLTGRVVNMNAAKNFLLTKMPRVYAKSEAALITMFENYVIHSLLSKARLVLKLMKEKN 138
Query: 154 LGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAE 213
L ++ FN L LYA + IP I++EM+ I P+ TYN+ + A D G E
Sbjct: 139 LLTTATAFNKLFHLYANKKKEDGIPVILREMRDMRISPNVETYNILIGIKAKKGDTEGME 198
Query: 214 RVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL-------ENRNAHRDLSA 266
R+ +MK DG + LAS YV AG EKA LKE E+R H
Sbjct: 199 RLFSKMKCDGDGTPNCEILCTLASGYVNAGDHEKAMAYLKEAVASEEFQESRRVHDK--- 255
Query: 267 YQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE 326
+I LY G + RIWR R FP + SY+ I + + AEK F E
Sbjct: 256 ---VIALYAAMGRADMIDRIWRFTR-RFPVVSANSYVATIAAYEKVGRIDRAEKVFAELT 311
Query: 327 SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 386
+ AY + G + AE+L ER R N ++ Y+++G+ K
Sbjct: 312 EKRTLLRPAHYVPLFRAYCEGGEMGKAEKLLERIRHGNGHINNLSYHHLVAGYMKSGNPK 371
Query: 387 LAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVE 446
+A + L + + + P +T+ ++ + DV AE + +++ + V
Sbjct: 372 MAAETLNRMFEE------RVPPCFDTVMLILKEHAKNADVSSAELLFQDMRRESYNKNVA 425
Query: 447 VFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 484
+ L+ Y AG+ + L+R+ +KV + + +LL
Sbjct: 426 AYNSLLEAYVNAGKHAYRFLQRMATDKVAPNARTFELL 463
>gi|449437992|ref|XP_004136774.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 604
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 181/400 (45%), Gaps = 11/400 (2%)
Query: 76 KLSENMEKRG-MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYC 134
+ SE +E G + D A LDL+AKVQG+ AE+Y +P++ + + + +LL Y
Sbjct: 189 QFSEWLEANGQLEFNQRDYASRLDLIAKVQGLPKAESYIAKIPQSFQGEVIHRTLLANYV 248
Query: 135 KELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSY 194
+KAE + KMK+L + + ++ LY + K+ I+ M+ ++ P +
Sbjct: 249 AANNVKKAEEVFNKMKDLEFPMTPFAHDQMLILYKRIDK-RKLADILSLMEKENVKPSPF 307
Query: 195 TYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE 254
TY + + A NDISG E+V++ MK +G + D +T S LA YV GL +KA+ LK+
Sbjct: 308 TYKILIDAKGLCNDISGMEQVVDSMKAEG-IKPDVSTLSLLAKHYVSNGLKDKAKVILKD 366
Query: 255 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 314
+E N+ + L+ LYG EV R+W ++ N + I LK+
Sbjct: 367 MEENNSKGSRLPCRILLPLYGALQMEDEVRRLW---KICEANPHMEESMAAIVAWGKLKN 423
Query: 315 LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 374
+ AEK F + R N M+ Y L +EL + G + TW+
Sbjct: 424 VQEAEKIFDRFVKTWKKPSTRHYNTMMNVYGGSKMLTKGKELVNQMAESGCRMDELTWDA 483
Query: 375 FSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 434
Y+ G+++ A L KA+ + P T T M + DV E
Sbjct: 484 VVKLYVEAGEVEKADSFLVKAVLQNKKK-----PMFTTYITLMDRYASRGDVPNVEKNFA 538
Query: 435 ILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKV 474
++++ + F+ LI+ Y A + M R+K + V
Sbjct: 539 MMRRLGYVGRLSQFQTLIQAYVNAKAPAYGMRERMKADNV 578
>gi|357439973|ref|XP_003590264.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479312|gb|AES60515.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 557
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 126/438 (28%), Positives = 202/438 (46%), Gaps = 24/438 (5%)
Query: 29 LFKK--GSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEK-RG 85
LFK S +SV L+++++ K + + E+G L LR RK+Y AL+ + +E +
Sbjct: 94 LFKAIVSVSGLSVDSALDKWVEKGKELSRQEIGLALNSLRRRKMYGRALQALDWLESNKK 153
Query: 86 MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLL-NCYCKELMTEKAEA 144
+ T + A LDL+AK++G+ AE Y +P + + L Y +LL NC E + K E
Sbjct: 154 LEFTEKEYASKLDLIAKLRGLPKAEKYLEHVPNSFRGELLYRTLLANCASLENL-RKTEE 212
Query: 145 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 204
KM+EL ++ N L+ L K +KI ++ M+ ++ P SYTY + +
Sbjct: 213 TFNKMRELGFPVTAFACNQLL-LIYKKIDKKKIADVLLMMEKENVKPSSYTYKILIDVKG 271
Query: 205 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 264
NDI G +++E MK +G D T ++LA Y AGL EK E LKE+E N ++
Sbjct: 272 LSNDIDGMSQIVETMKAEG-CELDHLTRASLARHYAAAGLTEKTEAILKEIEGENLKENM 330
Query: 265 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK- 323
L+ LY G EV RIW+ + P + L I+ LK + AE F+
Sbjct: 331 WVCPTLLRLYAILGRADEVERIWKVCE-SKPRVEDC--LAAIEAWGRLKKIEEAEAVFEM 387
Query: 324 ---EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 380
+W+ Y+ ++ Y + L ++L + G TW+ Y+
Sbjct: 388 MSNKWKLTARNYE-----SLLKIYIRHKMLNKGKDLIKTMGDSGCTIGPTTWDALVSLYV 442
Query: 381 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 440
+ G+++ A L+KA+ K P T T M + + DV AE L++A
Sbjct: 443 QAGEVEKADTVLQKALQQ-----NKMKPMFTTFMTIMEQYAKRGDVHNAEKIFYRLRQAN 497
Query: 441 DDLGVEVFEPLIRTYAAA 458
+ F L + Y A
Sbjct: 498 YISRISPFHALAQAYKNA 515
>gi|302801860|ref|XP_002982686.1| hypothetical protein SELMODRAFT_53462 [Selaginella moellendorffii]
gi|300149785|gb|EFJ16439.1| hypothetical protein SELMODRAFT_53462 [Selaginella moellendorffii]
Length = 463
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 180/392 (45%), Gaps = 10/392 (2%)
Query: 96 HLDLVAKVQGIDAAENYFVD-LPET-SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELN 153
HL+L +V ++AA+N+ + +P +K+ ++ Y + KA +L+ MKE N
Sbjct: 79 HLELTGRVVNMNAAKNFLLTKMPRVYAKSEAALITMFENYVIHSLLSKARLVLKLMKEKN 138
Query: 154 LGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAE 213
L ++ FN L LYA + IP I++EM+ I P+ TYN+ + A D G E
Sbjct: 139 LLTTATAFNKLFHLYANKKKEDGIPVILREMRDMRISPNVETYNILIGIKAKKGDTEGME 198
Query: 214 RVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD-LSAYQFLIT 272
R+ +MK DG + LAS YV AG EKA LKE + R+ + +I
Sbjct: 199 RLFSKMKCDGDGTPNGEILCTLASGYVNAGDHEKAMAYLKEAVASDEFRESRRVHDKVIA 258
Query: 273 LYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY 332
LY G + RIWR R FP + SY+ I + + AEK F E
Sbjct: 259 LYAAMGRADMIDRIWRFTR-RFPVVSANSYVATIAAYEKVGRIDRAEKVFAELTEKRTLL 317
Query: 333 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 392
+ AY + G + AE+L ER R N ++ Y+++G+ K+A + L
Sbjct: 318 RPAHYVPLFRAYCEGGEMGKAEKLLERIRHGNGHINNLSYHHLVAGYMKSGNPKMAAETL 377
Query: 393 EKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLI 452
+ + + P +T+ ++ + DV+ AE + +++ + V + L+
Sbjct: 378 TRMFEE------RVPPCFDTVMLILKEHAKNADVNSAELLFQDMRRESYNKNVAAYNSLL 431
Query: 453 RTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 484
Y AG+ + L+R+ +KV + + +LL
Sbjct: 432 EAYVNAGKHAYRFLQRMATDKVAPNARTFELL 463
>gi|413946863|gb|AFW79512.1| DNA-binding protein [Zea mays]
Length = 622
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 192/416 (46%), Gaps = 13/416 (3%)
Query: 61 TLKKLRDRKLYYPALKLSENMEKRGMNKTVS-DQAIHLDLVAKVQGIDAAENYFVDLPET 119
L LR R Y AL+L E ++K + + V D A HLDL AKV G+ AE +P +
Sbjct: 191 VLLNLRKRHWYSKALELVEWVQKSQLFEFVERDYAAHLDLTAKVYGLHKAEQTIEKIPAS 250
Query: 120 SKNHLTYGSLL-NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
+ + Y +LL NC + +K+E + +MK+L + FN L+ LY + +KI
Sbjct: 251 CRGEIVYRTLLANCVSASNI-KKSEQVFNRMKDLGFPVTQFSFNQLLLLYKRLDR-KKIA 308
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
++ M+ + P +TY + + A +V DI E+VIE M++D + D T + +A
Sbjct: 309 DVLAMMEKEDVKPSLFTYKILVDAKGSVGDIEAMEKVIESMEKDS-IEPDLTFNATIARH 367
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
Y+ G EKAE LK +E + ++ +A + L+ L+ GN V RIW++ NT
Sbjct: 368 YIFYGQREKAEALLKAMEGDDIQKNRAACKTLLPLHAFLGNSDAVERIWKACE---DNTR 424
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
++ I+ L D+ AEK F++ T + N ++ YA L+ +EL +
Sbjct: 425 VAESVSAIEAFGKLGDVEKAEKVFEDMLVHWKTLSSKFYNALLKVYADHNLLDKGKELAK 484
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 418
R A T + Y+ G+++ A + K P T T +
Sbjct: 485 RMDENRVRFGAPTLDALVKLYVEAGEVEKAESLVHKL-----SIQNHIKPIYNTYMTLLD 539
Query: 419 HFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKV 474
+ ++ DV +E L+++ + +++ L+ Y A + R+K + +
Sbjct: 540 SYSKKGDVRNSEKVFNKLRQSGYTGRIRMYQVLLHAYVRAKAPAYGFRERMKADNI 595
>gi|255584236|ref|XP_002532856.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527393|gb|EEF29534.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 196/419 (46%), Gaps = 4/419 (0%)
Query: 53 VFKWEVGDTLKKLRDRKLYYPALKLSE-NMEKRGMNKTVSDQAIHLDLVAKVQGIDAAEN 111
+ + +V + +LR KL AL++ E + +R D + L+ K+ GI E
Sbjct: 82 IHRGDVFHAINRLRKLKLNKRALEVMEWVIRERPYRPKELDYSYLLEFTTKLHGISHGEK 141
Query: 112 YFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKT 171
F +P +N L Y +L+ ++ + + ++KM+EL S + FN L+ L++
Sbjct: 142 LFTRIPTEFQNELLYNNLVIACLEKGVIRLSLEYMKKMRELGHPISHLIFNRLIILHSSP 201
Query: 172 GHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTT 231
G + IP I+ +MKA ++ TYN+ M+ A +++ G +V EMKR V + +
Sbjct: 202 GRRKMIPKILTQMKADKVVRHVSTYNILMKIEANEHNVEGLIKVFGEMKRL-EVEPNEVS 260
Query: 232 FSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 291
F LA + A L+ AE ++ +E + S LI LYG ++ RIW +++
Sbjct: 261 FCILAIAHAVARLYTVAEAYVEAVEKSYTGDNWSTLDVLIILYGYLRKGKKLDRIWGTVK 320
Query: 292 LAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLE 351
P+ + SY+ I+ + L AE+ + E +S N M+ Y K G ++
Sbjct: 321 -ELPHVRSKSYILAIEAFGRIGQLGRAEELWLEMKSLKGLKSTEQFNSMLSIYCKCGLVK 379
Query: 352 NAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGK-WVPSS 410
A ++ R G PNA T+ + L+ ++ A+ LE +D + K +P
Sbjct: 380 KATDIFREMDRNGCKPNAITFRHLALGCLKAELVEEALKTLEMGMDFTTSNKIKNSIPWL 439
Query: 411 ETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRL 469
ET + + F ++ DV AE F E L KA V+ LI+ Y A P +LRR+
Sbjct: 440 ETTFSIVEIFAEKGDVANAEKFFEELHKAKYARYTFVYNTLIKAYVKAKVYVPYLLRRM 498
>gi|307136024|gb|ADN33878.1| DNA-binding protein [Cucumis melo subsp. melo]
Length = 470
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 172/362 (47%), Gaps = 9/362 (2%)
Query: 8 GRTKNIAKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRD 67
G T K S K L++ ++K + +SV L++++ K + + ++ T+ LR
Sbjct: 116 GETGLAEKISTKGAPSELFNIIWK--APGLSVPSALDKWVSEGKELSRADISLTMLYLRR 173
Query: 68 RKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYG 127
R+++ ALK SE +E G T D A LDL+ K++G+ AENY +P++ + + Y
Sbjct: 174 RRMFGKALKFSEWLEANGKLVTDRDYASQLDLIGKLRGLRMAENYISKIPKSFQGEVVYR 233
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 187
+LL KAE + KMK+L ++ N L+ LY +T +KI ++ M+
Sbjct: 234 TLLANCVMSTNVRKAEEVFNKMKDLEFPITAFACNQLLLLYKRT-DKKKIADVLLLMEKE 292
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
++ P +TY + + A NDISG E+V++ MK +G + T LA YV AGL +K
Sbjct: 293 NVKPSPFTYKILIDAKGLSNDISGMEQVVDTMKAEG-IKLGVGTLLLLAKHYVSAGLKDK 351
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 307
A+ LKE E N+ +FL+ LYG+ EV R+W + N + I
Sbjct: 352 AKATLKETEEINSKGSRRPCRFLLPLYGELQMEDEVRRLW---EICESNPHVEECMAAIV 408
Query: 308 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA-- 365
LK++ AEK F R + M+ Y L +EL + G
Sbjct: 409 AWGKLKNVQEAEKIFDRVVKTGKKLSTRHYSTMMNVYRDSKMLTKGKELVNQMAESGCSM 468
Query: 366 DP 367
DP
Sbjct: 469 DP 470
>gi|5103846|gb|AAD39676.1|AC007591_41 F9L1.43 [Arabidopsis thaliana]
Length = 623
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/441 (25%), Positives = 204/441 (46%), Gaps = 11/441 (2%)
Query: 35 SDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENM-EKRGMNKTVSDQ 93
S +SV L+++++ K + E + +LR R+++ AL+++E + E + D
Sbjct: 167 SGLSVGSALDKWVEQGKDTNRKEFESAMLQLRKRRMFGRALQMTEWLDENKQFEMEERDY 226
Query: 94 AIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELN 153
A LDL++KV+G E Y +PE+ + L Y +LL + AEA+ KMK+L
Sbjct: 227 ACRLDLISKVRGWYKGEAYIKTIPESFRGELVYRTLLANHVATSNVRTAEAVFNKMKDLG 286
Query: 154 LGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAE 213
S+ N ++ LY + +KI ++ ++ ++ P+ TY + + + NDI+G E
Sbjct: 287 FPLSTFTCNQMLILYKRVDK-KKIADVLLLLEKENLKPNLNTYKILIDTKGSSNDITGME 345
Query: 214 RVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITL 273
+++E MK +G V D + +A Y AGL EKAE+ LKE+E + + + L+++
Sbjct: 346 QIVETMKSEG-VELDLRARALIARHYASAGLKEKAEKVLKEMEGESLEENRHMCKDLLSV 404
Query: 274 YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYD 333
YG EV R+W ++ N L I + + AE F++
Sbjct: 405 YGYLQREDEVRRVW---KICEENPRYNEVLAAILAFGKIDKVKDAEAVFEKVLKMSHRVS 461
Query: 334 IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
V +V++ Y + ++L ++ G + A TW+ Y+ G+++ A L
Sbjct: 462 SNVYSVLLRVYVDHKMVSEGKDLVKQMSDSGCNIGALTWDAVIKLYVEAGEVEKAESSLS 521
Query: 394 KAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIR 453
KAI + + P + M + + DV E + +K+A ++ LI+
Sbjct: 522 KAIQS-----KQIKPLMSSFMYLMHEYVRRGDVHNTEKIFQRMKQAGYQSRFWAYQTLIQ 576
Query: 454 TYAAAGRTSPVMLRRLKMEKV 474
Y A + M R+K + +
Sbjct: 577 AYVNAKAPAYGMKERMKADNI 597
>gi|297842839|ref|XP_002889301.1| hypothetical protein ARALYDRAFT_477224 [Arabidopsis lyrata subsp.
lyrata]
gi|297335142|gb|EFH65560.1| hypothetical protein ARALYDRAFT_477224 [Arabidopsis lyrata subsp.
lyrata]
Length = 597
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 116/445 (26%), Positives = 208/445 (46%), Gaps = 23/445 (5%)
Query: 37 VSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENME---KRGMNKTVSDQ 93
+S+ L+++++ + + EV + +LR R++Y AL+LSE +E K MN+ D
Sbjct: 143 LSIGSALDKWVEEGNEITRVEVAKAMLQLRRRRMYGRALQLSEWLEANKKIEMNE--RDY 200
Query: 94 AIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLL-NCYCKELMTEKAEALLEKMKEL 152
+ LDL K++G++ E Y +P++ K + Y +LL NC +K+E + +MK+L
Sbjct: 201 SSRLDLTVKIRGLENGEAYMQKIPKSFKGEVIYRTLLANCVAAG-NVKKSELVFNRMKDL 259
Query: 153 NLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA 212
S + ++ LY + +KI ++ M+ ++ P TY + + A NDISG
Sbjct: 260 GFPLSGFTCDQMLLLYKRIDR-KKIADVLLLMEKENVKPSLLTYKILIDVKGATNDISGM 318
Query: 213 ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLIT 272
E+++E MK +G V D+ T + A Y AGL EKAE+ LKE+E + + A++ L++
Sbjct: 319 EQILETMKDEG-VQPDFQTQALTAKHYSGAGLKEKAEKVLKEMEGESLEANRRAFKDLLS 377
Query: 273 LYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY 332
+Y G EV RIW ++ L I L + AE F++ +
Sbjct: 378 IYASLGREDEVTRIW---KICESKPYFDESLAAIHAFGKLNKVQEAEAIFEKIVTMGRRA 434
Query: 333 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 392
+V++ Y L ++L +R G A TW+ Y+ G+++ A L
Sbjct: 435 SSNTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEKADSML 494
Query: 393 EKAIDTGRGDGGKWVPSSETIRTF---MRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFE 449
+KA K + + +F M + + DV E +++ + F+
Sbjct: 495 DKA--------SKQSHTKLMMNSFMYIMDEYSKRGDVHNTEKIFLKMREVGYTSRLRQFQ 546
Query: 450 PLIRTYAAAGRTSPVMLRRLKMEKV 474
L++ Y A + M R+K + +
Sbjct: 547 ALLQAYINAKAPAYGMRDRMKADNI 571
>gi|15220095|ref|NP_178143.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42572199|ref|NP_974190.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|145327755|ref|NP_001077853.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75262222|sp|Q9C977.1|PP135_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g80270, mitochondrial; Flags: Precursor
gi|12324975|gb|AAG52431.1|AC018848_2 hypothetical protein; 8785-10851 [Arabidopsis thaliana]
gi|17064898|gb|AAL32603.1| Unknown protein [Arabidopsis thaliana]
gi|20259918|gb|AAM13306.1| unknown protein [Arabidopsis thaliana]
gi|332198258|gb|AEE36379.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332198259|gb|AEE36380.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332198260|gb|AEE36381.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/448 (26%), Positives = 211/448 (47%), Gaps = 29/448 (6%)
Query: 37 VSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENME-KRGMNKTVSDQAI 95
+S+ L+++++ + + E+ + +LR R++Y AL++SE +E + + T D A
Sbjct: 142 LSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTERDYAS 201
Query: 96 HLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLL-NCYCKELMTEKAEALLEKMKELNL 154
LDL K++G++ E +P++ K + Y +LL NC +K+E + KMK+L
Sbjct: 202 RLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAG-NVKKSELVFNKMKDLGF 260
Query: 155 GFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAER 214
S + ++ L+ + +KI ++ M+ +I P TY + + A NDISG E+
Sbjct: 261 PLSGFTCDQMLLLHKRIDR-KKIADVLLLMEKENIKPSLLTYKILIDVKGATNDISGMEQ 319
Query: 215 VIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLY 274
++E MK +G V D+ T + A Y AGL +KAE+ LKE+E + + A++ L+++Y
Sbjct: 320 ILETMKDEG-VELDFQTQALTARHYSGAGLKDKAEKVLKEMEGESLEANRRAFKDLLSIY 378
Query: 275 GQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK-----EWESGC 329
G EV RIW ++ L IQ L + AE F+ + +
Sbjct: 379 ASLGREDEVKRIW---KICESKPYFEESLAAIQAFGKLNKVQEAEAIFEKIVKMDRRASS 435
Query: 330 ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 389
+TY +V++ Y L ++L +R G A TW+ Y+ G+++ A
Sbjct: 436 STY-----SVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEKAD 490
Query: 390 DCLEKAIDTGRGDGGKWVPSSETIRTF---MRHFEQEKDVDGAEGFLEILKKAVDDLGVE 446
L+KA K + + +F M + + DV E +++A +
Sbjct: 491 SLLDKA--------SKQSHTKLMMNSFMYIMDEYSKRGDVHNTEKIFLKMREAGYTSRLR 542
Query: 447 VFEPLIRTYAAAGRTSPVMLRRLKMEKV 474
F+ L++ Y A + M RLK + +
Sbjct: 543 QFQALMQAYINAKSPAYGMRDRLKADNI 570
>gi|449479004|ref|XP_004155478.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 259
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 139/226 (61%), Gaps = 6/226 (2%)
Query: 7 FGRTKNIAKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLR 66
F TK++ S E+ L+ R+++ G S+ + L+Q+++ ++V + ++ +K+LR
Sbjct: 23 FYSTKSLPSPST---EDTLFRRVYRAGDPRTSIVRVLDQWVEEGRQVNQSDLQKLIKQLR 79
Query: 67 DRKLYYPALKLSENMEKRGMNKTVSDQ--AIHLDLVAKVQGIDAAENYFVDLPETSKNHL 124
+ AL+L E E+ NK S AI L L++K +G++ AE YF + E+S++H
Sbjct: 80 TFGRFNHALQLCE-WERNERNKCPSPGHIAIQLHLISKARGLEQAEEYFSSIGESSRDHK 138
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
YG+LL+CY + +KAEA+++KM+E+ + + +N+++ LYA+ G EK+ +++EM
Sbjct: 139 VYGALLHCYVENKNLKKAEAIMQKMREVGFMKTPLSYNAMLNLYAQLGKHEKLDELVKEM 198
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWT 230
+ I + +TYNV M A AA +DI+ E+++ +M+ D VA DW+
Sbjct: 199 EEMGIGHNRFTYNVRMNAYAAASDITNMEKLLSKMEADPLVATDWS 244
>gi|145335742|ref|NP_173001.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806396|sp|Q9XI21.2|PPR44_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g15480, mitochondrial; Flags: Precursor
gi|332191207|gb|AEE29328.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 594
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 111/441 (25%), Positives = 204/441 (46%), Gaps = 11/441 (2%)
Query: 35 SDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENM-EKRGMNKTVSDQ 93
S +SV L+++++ K + E + +LR R+++ AL+++E + E + D
Sbjct: 138 SGLSVGSALDKWVEQGKDTNRKEFESAMLQLRKRRMFGRALQMTEWLDENKQFEMEERDY 197
Query: 94 AIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELN 153
A LDL++KV+G E Y +PE+ + L Y +LL + AEA+ KMK+L
Sbjct: 198 ACRLDLISKVRGWYKGEAYIKTIPESFRGELVYRTLLANHVATSNVRTAEAVFNKMKDLG 257
Query: 154 LGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAE 213
S+ N ++ LY + +KI ++ ++ ++ P+ TY + + + NDI+G E
Sbjct: 258 FPLSTFTCNQMLILYKRV-DKKKIADVLLLLEKENLKPNLNTYKILIDTKGSSNDITGME 316
Query: 214 RVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITL 273
+++E MK +G V D + +A Y AGL EKAE+ LKE+E + + + L+++
Sbjct: 317 QIVETMKSEG-VELDLRARALIARHYASAGLKEKAEKVLKEMEGESLEENRHMCKDLLSV 375
Query: 274 YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYD 333
YG EV R+W ++ N L I + + AE F++
Sbjct: 376 YGYLQREDEVRRVW---KICEENPRYNEVLAAILAFGKIDKVKDAEAVFEKVLKMSHRVS 432
Query: 334 IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
V +V++ Y + ++L ++ G + A TW+ Y+ G+++ A L
Sbjct: 433 SNVYSVLLRVYVDHKMVSEGKDLVKQMSDSGCNIGALTWDAVIKLYVEAGEVEKAESSLS 492
Query: 394 KAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIR 453
KAI + + P + M + + DV E + +K+A ++ LI+
Sbjct: 493 KAIQS-----KQIKPLMSSFMYLMHEYVRRGDVHNTEKIFQRMKQAGYQSRFWAYQTLIQ 547
Query: 454 TYAAAGRTSPVMLRRLKMEKV 474
Y A + M R+K + +
Sbjct: 548 AYVNAKAPAYGMKERMKADNI 568
>gi|414877074|tpg|DAA54205.1| TPA: hypothetical protein ZEAMMB73_351899 [Zea mays]
Length = 613
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 117/453 (25%), Positives = 207/453 (45%), Gaps = 19/453 (4%)
Query: 39 VRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVS-DQAIHL 97
V L ++ K + + E+ L LR RK Y+ AL+L E ++ + + D A +
Sbjct: 160 VTSALEKWAKDGNALDRGELYYVLLNLRKRKWYHKALELVEYVQNSQLLELGERDYAARV 219
Query: 98 DLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFS 157
DL AKV G+ AE Y +P + ++ + Y +LL E +K+E + +MK+L +
Sbjct: 220 DLTAKVYGLHKAEQYIEKIPASHRSEVVYRTLLANCVAEGNVKKSEQVFNRMKDLGFPVT 279
Query: 158 SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIE 217
+ N L+ LY + +KI ++ M+ + P +TY V + A V D+ E+V+E
Sbjct: 280 TFSSNQLLLLYKRLDK-KKIADVLTMMEKEDVKPSIFTYKVLVDAKGMVGDVEAMEKVVE 338
Query: 218 EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQT 277
M +DG + D T + +A Y+ G +KAE L+ +E + ++ +A +FL+ LY
Sbjct: 339 SMVKDG-IEPDLTFNATIARQYIFNGQRDKAETLLESMEGDDIQKNRAACKFLLPLYAFL 397
Query: 278 GNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE----WESGCATYD 333
GN V RIW ++ NT L+ I L ++ AEK F++ W++ + Y
Sbjct: 398 GNGDAVERIW---KVCEDNTRIDECLSAIDAFGKLGNVEKAEKVFEDMFVKWKNLSSKY- 453
Query: 334 IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
++ YA + L+ EEL +R GA T Y G+++ A L
Sbjct: 454 ---YTALLKVYANQNLLDKGEELAKRMDEEGAKFGTPTLNALVKLYADAGEVEKAESLLH 510
Query: 394 KAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIR 453
K PS + T + + ++ DV +E L++ + +++ L+
Sbjct: 511 KL-----SLKNNVKPSYSSYMTLLDSYSKKGDVHNSEKVFNKLRQIGYTGRIRMYQFLLH 565
Query: 454 TYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEA 486
+Y A + R+K + + + A L+ A
Sbjct: 566 SYLHAKAPAYGFKERMKADNIFPNSAVATLIAA 598
>gi|449437712|ref|XP_004136635.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 124/470 (26%), Positives = 213/470 (45%), Gaps = 16/470 (3%)
Query: 8 GRTKNIAKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRD 67
G T + K S K L + ++K + ++V L++++ K + + ++ + LR
Sbjct: 123 GETGLVEKISIKRAPSELLNVIWK--APGLTVSSALDKWVSEGKELSRDDISSAMLNLRK 180
Query: 68 RKLYYPALKLSENMEKRG-MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTY 126
++Y AL+ SE +E G ++ D A LDL+ K++G+ AENY +P++ + + Y
Sbjct: 181 CRMYGKALQFSEWLEANGKLDFVEKDYASRLDLIGKLRGLRMAENYIAKIPKSFQGEVVY 240
Query: 127 GSLL-NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
+LL NC KAE + KMK L ++ N L+ LY +T KI ++ MK
Sbjct: 241 QTLLVNCVIAS-NVHKAEKVFNKMKNLEFPITAFACNQLLLLYKRT-DKRKIADVLLLMK 298
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
++ + TY + + NDI+G E V++ MK +G + D T S L YV GL
Sbjct: 299 KENVKYSTSTYRILIDVNGLSNDITGMEEVVDSMKAEG-IKLDVETLSRLVKHYVSGGLK 357
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
+KA+ LKE+E N+ + L+ LYG+ EV R+W + N +
Sbjct: 358 DKAKAILKEMEEINSEGSRWPCRILLPLYGELQMEDEVRRLW---EICGSNPHIEECMAA 414
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGR-LENAEELKERARRRG 364
I LK++ AEK F R + M+ Y ++ + L +E+ ++ G
Sbjct: 415 IVAWGKLKNIQEAEKIFDRVVKTGEKLSARHYSTMLNVYREDSKMLTKGKEVVKQMAESG 474
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 424
+ + T + Y+ G+++ A L K + + P T T M +
Sbjct: 475 SRMDPVTLDAVVKLYVEAGEVEKADSFLVKTVLQYKKK-----PMFTTYITLMDRYASRG 529
Query: 425 DVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKV 474
DV AE +++K + F+ LI+ Y A + M R+K + V
Sbjct: 530 DVPNAEKIFGMMRKYGYVGRLSQFQTLIQAYVNAKAPAYGMRERMKADSV 579
>gi|6958202|gb|AAF32491.1|AF091837_1 DNA-binding protein [Triticum aestivum]
Length = 612
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 192/409 (46%), Gaps = 13/409 (3%)
Query: 65 LRDRKLYYPALKLSENME-KRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNH 123
LR RK Y+ AL+L E +E + ++ D A LDLVAKV G+ AE Y +P + +
Sbjct: 186 LRKRKFYFKALQLLEWLEDSKVIDLGERDYASRLDLVAKVHGVYKAEKYIDSIPISHRGE 245
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+ Y +LL E +K+E + KMK+L + N L+ LY + +KI ++ +
Sbjct: 246 IVYRTLLANCVSEANVKKSEEVFNKMKDLGFPVTVFAINQLLLLYKRVDK-KKIADVLAK 304
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ ++ P +TY + + A+ DI+G E+V+E M+ +G V D + +A Y+ AG
Sbjct: 305 MEKENVKPSLFTYKLLVDTKGAIRDIAGMEKVVESMQAEG-VEPDLLFQATIAKHYIFAG 363
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
EKAE L+ +E + + +A + L+ LY G +V R+W ++ N L
Sbjct: 364 HREKAEAILESMEGGDIKGNRNACKILLPLYAFLGKKDDVERMW---QVCEANPRLDECL 420
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+ I+ L D+ AEK F++ + T + N ++ YA + + +EL +R
Sbjct: 421 SAIESFGRLGDVERAEKVFEDMFATWKTLSSKFYNALMKVYADQNLFKKGKELAKRMDED 480
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQE 423
G T + Y+ G++ A L K K P + + + ++
Sbjct: 481 GCRLGISTIDSLVKLYVGAGEVDKAESILHKL-----SKSNKMKPQYSSYLMLLDTYSKK 535
Query: 424 KDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKME 472
D+ +E + L++ + V ++ L+ Y A +PV R +M+
Sbjct: 536 GDIHNSEKVFDQLRQMGYNGRVRQYQLLLNAYVHA--KTPVYGFRERMK 582
>gi|297829684|ref|XP_002882724.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328564|gb|EFH58983.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 518
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/306 (32%), Positives = 152/306 (49%), Gaps = 42/306 (13%)
Query: 58 VGDTLKKLRDRKLYYPALKLSENM-EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL 116
V ++KL D K Y AL++S M EK+ N D A+ L+ V G++ AE +F +
Sbjct: 78 VKGIVEKLHDSKRYRQALEVSNWMIEKKICNHLPEDLAVRFHLIENVLGLEEAEKFFQSI 137
Query: 117 PETSKNHLTYGSLLNCYCK--ELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP 174
PE K Y SLL Y K E+ KAE EKM++L + P+NS+++LY+ +
Sbjct: 138 PENLKGESIYTSLLKSYAKSGEISLRKAEYTFEKMRKLGMLLRPSPYNSMVSLYSSLRNR 197
Query: 175 EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSN 234
K+ I++EMK +++ DS T N +R AAV D++ ++ + ADW +
Sbjct: 198 NKVDEILREMKENNLELDSPTVNNALRVYAAVCDVATMDKFL----------ADWNAITT 247
Query: 235 LASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF 294
L L LE A+R LI LYG+ G +VYRIW +
Sbjct: 248 L--------------EWLTTLEMAKAYR-------LIRLYGEAGEREDVYRIWD----LY 282
Query: 295 PNTA---NISYLNMIQVLVNLKDLPGAEKC-FKEWESGCATYDIRVTNVMIGAYAKEGRL 350
NT N + +I L+ L D+ GAEK + EWES +D+R+ +++ Y +G +
Sbjct: 283 KNTKEKDNEGFRALIGSLLKLDDINGAEKIYYDEWESSGLEFDLRIPTMLMSGYRAKGMV 342
Query: 351 ENAEEL 356
+ A++L
Sbjct: 343 KKADKL 348
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 98/184 (53%), Gaps = 8/184 (4%)
Query: 9 RTKNIAKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDR 68
R K + K++ K L + + ++ +S+ + + +K++ +V ++ D +K LRD
Sbjct: 337 RAKGMVKKADKLLYKTMKNKRLV-----ISINPFVEELVKNRNQVKPSDLRDLIKNLRDS 391
Query: 69 KLYYPALKLSENM-EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF-VDLPETSKNHLTY 126
AL+ S M EKRG N D AI L+ KV G++ AE +F +P+ K++ Y
Sbjct: 392 NQLSKALEASTWMCEKRGFNLFPEDYAIRFHLIEKVLGLEEAEKFFESSIPKNMKDYSVY 451
Query: 127 GSLLNCYCKELMT-EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
+LL Y + T KAE + EKM+EL PFNS+++LY + K+ ++ +MK
Sbjct: 452 DTLLTSYTRSDKTLVKAEGVFEKMRELGFLSKLSPFNSIISLYIEQRKLSKVNKLLCDMK 511
Query: 186 ASSI 189
++I
Sbjct: 512 QNNI 515
>gi|357139769|ref|XP_003571450.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Brachypodium distachyon]
Length = 517
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 195/403 (48%), Gaps = 15/403 (3%)
Query: 92 DQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKEL-MTEKAEALLEKMK 150
D + L+ AKV GI AE+ F+ +P+ +N L Y +L+ C EL + + + + KM+
Sbjct: 118 DYSYLLEFTAKVHGISEAESLFLRIPQEYRNELLYNNLVMA-CLELSLIKLSYGYMRKMR 176
Query: 151 ELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDIS 210
EL+L S +N L+ L++ G + IP I+ +MKAS + P + TYN+ ++ A ++I
Sbjct: 177 ELSLPISPYVYNRLIILHSSEGRRKTIPKILAQMKASKVTPHTSTYNILLKIQANEHNID 236
Query: 211 GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 270
G RV +MKR +V + T+ LA + A L+ ++ ++ ++N + S + L
Sbjct: 237 GVARVFNDMKR-AKVEPNEITYGILAISHAVARLYTVSQTYIEAIKNSMTGTNWSTQEIL 295
Query: 271 ITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCA 330
+ LYG G E+ W+ +++ P+ + S+ I+ + + AE+ + E +S
Sbjct: 296 LILYGYLGKEKELKMTWKLMQV-LPHIRSKSFTLAIEAFGKIGSIEQAEEIWGEIKSA-- 352
Query: 331 TYDIRVT---NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKL 387
+R+T N M+ Y + G ++ A + + R G PNA T+ + L+ G +K
Sbjct: 353 -RKLRLTEQFNSMLSVYCRHGVVDKASAVFKEMRASGCQPNAITYRHLALGCLKAGLVKQ 411
Query: 388 AVDCLE---KAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLG 444
A++ ++ K + T + P ET + +F + D++ A+ L ++
Sbjct: 412 ALNTMDMGKKEVVTRKVRNS--TPWLETTHMLLENFAEIGDLENAKIVYAELNESKYCRN 469
Query: 445 VEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAI 487
V+ L++ Y A P +R + + + LL I
Sbjct: 470 SFVYNTLLKAYVKAKVYEPNFVRTMILRGAMPDAETHSLLRLI 512
>gi|388512893|gb|AFK44508.1| unknown [Medicago truncatula]
Length = 244
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 109/195 (55%), Gaps = 2/195 (1%)
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
LFEKA+ LK+ E R RD + +L++LYG GN EVYR+W + + FP+ N+ Y
Sbjct: 3 LFEKAQECLKKAEGRILGRDKVPFHYLLSLYGSVGNKDEVYRVWNNYKSMFPSIPNLGYH 62
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I LV + D+ GAEK ++EW S + D R+ N++I Y K+G+ + +
Sbjct: 63 AIISSLVRMDDIEGAEKLYEEWVSVRPSDDSRIGNLLISWYLKKGKSDKVFSFFKHMSEG 122
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQE 423
G PN+ TWE+ S+ ++ + A+ CLEKA T D W P + F++ + E
Sbjct: 123 GGCPNSTTWELLSEGHIAEKRVSEALSCLEKAFMT--SDSKSWKPKPIKLAAFLKLCQDE 180
Query: 424 KDVDGAEGFLEILKK 438
D++ A+ +E+L+K
Sbjct: 181 DDMESAKVLIELLRK 195
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%)
Query: 138 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 197
+ EKA+ L+K + LG +PF+ L++LY G+ +++ + K+ + Y+
Sbjct: 3 LFEKAQECLKKAEGRILGRDKVPFHYLLSLYGSVGNKDEVYRVWNNYKSMFPSIPNLGYH 62
Query: 198 VWMRALAAVNDISGAERVIEE 218
+ +L ++DI GAE++ EE
Sbjct: 63 AIISSLVRMDDIEGAEKLYEE 83
>gi|356498381|ref|XP_003518031.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Glycine max]
Length = 609
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 127/472 (26%), Positives = 222/472 (47%), Gaps = 28/472 (5%)
Query: 9 RTKNIAKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDR 68
+ K+ +R++ L +A+ + + +SV LN++++ K + + E+ +++LR R
Sbjct: 134 KKKSQGRRTQSELFKAIAN------APGLSVDSALNKWVEHGKELSRKEILLAVRELRRR 187
Query: 69 KLYYPALKLSENMEK-RGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYG 127
K+Y A +L + +E + + SD A LDL+AK++G+ AE Y +PE+ + L Y
Sbjct: 188 KMYGRAFQLFQWLESNKKLEFMESDYASQLDLIAKLRGLPKAEKYIESVPESFRGELLYR 247
Query: 128 SLL-NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKA 186
+LL NC + + E + KMK+L+L ++ N L+ LY K +KI ++ M+
Sbjct: 248 TLLANCASQNNLI-ATEKIFNKMKDLDLPLTAFACNQLLLLYKKL-DKKKIADVLLLMEK 305
Query: 187 SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE 246
++ P +TY + + + NDI+G E+V E MK +G D + LA Y +GL E
Sbjct: 306 ENVKPSLFTYRILIDSKGQSNDIAGMEQVFETMKEEG-FEPDIQIQALLARHYTSSGLKE 364
Query: 247 KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI 306
KAE LKE+E N + L+ LY G EV RIW+ + P + L +
Sbjct: 365 KAEAMLKEMEGENLKENQWVCATLLRLYANLGKADEVERIWKVCE-SKPRVEDC--LAAV 421
Query: 307 QVLVNLKDLPGAEKCF----KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+ L + AE F K+W+ Y +V++ YA L +EL +
Sbjct: 422 EAWGKLNKIEEAEAVFEMVSKKWKLNSKNY-----SVLLKIYANNKMLTKGKELVKLMAD 476
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ 422
G TW+ Y++ G+++ A L KAI + P T + + +
Sbjct: 477 SGVRIGPLTWDALVKLYIQAGEVEKADSILHKAIQQ-----NQLQPMFTTYLAILEQYAK 531
Query: 423 EKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKV 474
DV +E +++A + F+ LI+ Y A + + R+K + +
Sbjct: 532 RGDVHNSEKIFLKMRQAGYTSRISQFQVLIQAYVNAKVPAYGIRERIKADNL 583
>gi|224106481|ref|XP_002314181.1| predicted protein [Populus trichocarpa]
gi|222850589|gb|EEE88136.1| predicted protein [Populus trichocarpa]
Length = 525
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 124/469 (26%), Positives = 210/469 (44%), Gaps = 9/469 (1%)
Query: 7 FGRTKNIAKRSKKHLE----EALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTL 62
F T I K KK L+ + L R+ K + SV ++ + + +V T+
Sbjct: 37 FLNTHTIDKFPKKSLDPEGPKCLSSRIEKLPRGE-SVGYAFQSWMGEGFPIHRGDVFHTI 95
Query: 63 KKLRDRKLYYPALKLSE-NMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK 121
+LR +L AL++ E + +R D + L+ K GI E F+ +P +
Sbjct: 96 NRLRKLRLNKRALEVMEWVVRERPYRLKELDYSYLLEFTTKHHGISHGEKLFLHVPSEFQ 155
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N L Y +L+ ++ + + ++KM+E S + FN L+ L++ G + IP I+
Sbjct: 156 NELLYNNLVISCLEKGVIRLSLDYMKKMREQGHPISYLIFNRLIILHSSPGSRKMIPKIL 215
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+M+A ++P TYN+ M+ A ++I G +V +MKR +V + +F LA+ +
Sbjct: 216 AQMRADKVVPHVSTYNILMKIEANEHNIDGLVKVFNDMKR-FKVEPNEVSFCILATAHAA 274
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
A L+ AE ++ +E + + S LI LYG G E+ R W + L P+ + S
Sbjct: 275 ARLYTVAEAYVEAVEKSCSGDNWSTLDVLIILYGHLGKEKELERTW-GIVLELPHVRSKS 333
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y+ I+ + L AE+ + E +S N M+ Y K G ++ A
Sbjct: 334 YMLAIEAYGKIGQLSRAEELWLEMKSIHGLRSTEQFNSMLSVYCKHGLIKKATGNFREME 393
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGK-WVPSSETIRTFMRHF 420
G N+ T+ + L+ ++ A+ LE + + K P ET + + F
Sbjct: 394 INGCKANSITFRHLALGCLKANLVEEALKTLEMGKNLTTSNRVKNSTPWLETTLSIIELF 453
Query: 421 EQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRL 469
++ DV E E L KA VF LI+ Y A SP +LRR+
Sbjct: 454 AEKGDVVNVEKLFEELAKAKYIRHTFVFNILIKAYVKAKIYSPNLLRRM 502
>gi|224072985|ref|XP_002303946.1| predicted protein [Populus trichocarpa]
gi|222841378|gb|EEE78925.1| predicted protein [Populus trichocarpa]
Length = 451
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 187/402 (46%), Gaps = 16/402 (3%)
Query: 74 ALKLSENMEK-RGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNC 132
+L+ SE +E+ + + T D A HLD +AKV G+ AE + +PE+ + L Y +LL
Sbjct: 33 SLQFSEWLERSKQTDFTERDYACHLDCIAKVLGLWKAEKFIEKIPESFRGKLVYQTLLAS 92
Query: 133 YCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPD 192
L +KAE++ KM++L L + ++ +Y + +KIP I+ MK +I P
Sbjct: 93 CVSVLNIKKAESVFRKMRDLGLPITVEACEQMIIIYKRL-EKKKIPNILLMMKDQNIKPS 151
Query: 193 SYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERAL 252
TY + + A ND +G E+++E M+ +G + D + +A Y+ GL +KA+ L
Sbjct: 152 FLTYKLLIDAKCQFNDTTGMEKLVEAMRNEG-MELDVFALAVIARHYISVGLKDKADLIL 210
Query: 253 KELENRNAH-RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
K++E R L A + L++LY GN EV RIW+ + + I+ + L
Sbjct: 211 KQIEKRKQKGGGLGARRSLLSLYASLGNADEVGRIWKECKADPKQSECIAAIRAWGKLGK 270
Query: 312 LKDLPG-AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
+++ +E + W++ Y + NV Y ++L E+ G+
Sbjct: 271 VEEAEAVSEMMLQTWKNPTFGYYTSLLNV----YIDNNLTSKGKDLVEQMGDIGSWAGPL 326
Query: 371 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 430
TW+ Y+++GD++ A L K R P T M H+ + D+ E
Sbjct: 327 TWDALVRLYIKSGDVEKAHSILLKVARMKRKR-----PLYTTCIAVMEHYAKRGDIHNTE 381
Query: 431 GFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKME 472
+ +++ + FE L+ Y A +P+ R +M+
Sbjct: 382 KLFQSMRELGYTARFKPFEILVDAYINA--KTPIYGLRARMK 421
>gi|22165078|gb|AAM93695.1| putative leaf protein [Oryza sativa Japonica Group]
Length = 372
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 176/408 (43%), Gaps = 81/408 (19%)
Query: 82 EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEK 141
E+ ++ + D A L+L+ KV G+D A YF +P+ K YGS
Sbjct: 36 ERLHLHLSPGDVANRLELITKVYGLDRAVEYFDSMPDQLKQQQCYGS------------- 82
Query: 142 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 201
L+ YA+ EK + ++M+ M SY YNV MR
Sbjct: 83 ----------------------LLKCYAEANCVEKAEELFEKMRGMG-MASSYAYNVMMR 119
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 261
+Y++ G E+ + +E
Sbjct: 120 ------------------------------------LYLQNGQVERVHSMHQAMEESGIV 143
Query: 262 RDLSAYQFLITLYGQTGNLSEVYRIWRSLR-----LAFPNTANISYLNMIQVLVNLKDLP 316
D+S L+ + + L Y + ++ L N+ N Y+ I VL+ + D+
Sbjct: 144 PDVSTTHTLVAVLRKKKTLVAAYVVAEDIKAIENVLEKANSCNSMYMCRIGVLLKMNDMV 203
Query: 317 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 376
GAEK ++EWES +D R+ N+++ AY KEG ++ AE L ++ ++G P A T +
Sbjct: 204 GAEKAYEEWESKHVYHDSRLINLLVDAYCKEGLMDKAEALVDQFIKKGRMPFANTCYKLA 263
Query: 377 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 436
Y + G + A D +KA+ + + W+P + + +F ++K+V+ AE + +L
Sbjct: 264 GGYFKVGQVSKAADLTKKALASASNE---WIPDLTNVLMSLNYFAEQKNVEAAEEMMSLL 320
Query: 437 KKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 484
++ V +++ L++TY AG+ +L R+K + +E E ++K+L
Sbjct: 321 QRLVTPTR-DIYHGLLKTYVNAGKPVSDLLHRMKKDGMEADEETEKIL 367
>gi|78708864|gb|ABB47839.1| expressed protein [Oryza sativa Japonica Group]
gi|215701127|dbj|BAG92551.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 341
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 176/408 (43%), Gaps = 81/408 (19%)
Query: 82 EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEK 141
E+ ++ + D A L+L+ KV G+D A YF +P+ K YGS
Sbjct: 5 ERLHLHLSPGDVANRLELITKVYGLDRAVEYFDSMPDQLKQQQCYGS------------- 51
Query: 142 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 201
L+ YA+ EK + ++M+ M SY YNV MR
Sbjct: 52 ----------------------LLKCYAEANCVEKAEELFEKMRGMG-MASSYAYNVMMR 88
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 261
+Y++ G E+ + +E
Sbjct: 89 ------------------------------------LYLQNGQVERVHSMHQAMEESGIV 112
Query: 262 RDLSAYQFLITLYGQTGNLSEVYRIWRSLR-----LAFPNTANISYLNMIQVLVNLKDLP 316
D+S L+ + + L Y + ++ L N+ N Y+ I VL+ + D+
Sbjct: 113 PDVSTTHTLVAVLRKKKTLVAAYVVAEDIKAIENVLEKANSCNSMYMCRIGVLLKMNDMV 172
Query: 317 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 376
GAEK ++EWES +D R+ N+++ AY KEG ++ AE L ++ ++G P A T +
Sbjct: 173 GAEKAYEEWESKHVYHDSRLINLLVDAYCKEGLMDKAEALVDQFIKKGRMPFANTCYKLA 232
Query: 377 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 436
Y + G + A D +KA+ + + W+P + + +F ++K+V+ AE + +L
Sbjct: 233 GGYFKVGQVSKAADLTKKALASASNE---WIPDLTNVLMSLNYFAEQKNVEAAEEMMSLL 289
Query: 437 KKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 484
++ V +++ L++TY AG+ +L R+K + +E E ++K+L
Sbjct: 290 QRLVTPTR-DIYHGLLKTYVNAGKPVSDLLHRMKKDGMEADEETEKIL 336
>gi|11138066|dbj|BAB17739.1| putative DNA-binding protein [Oryza sativa Japonica Group]
Length = 591
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 120/456 (26%), Positives = 205/456 (44%), Gaps = 15/456 (3%)
Query: 34 SSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGM-NKTVSD 92
S V V ++L + + E+ L LR RKLY AL+L E +E+ + + D
Sbjct: 133 SPRVDVAGATKKWLNDGNTLERSELFYVLLSLRKRKLYTKALQLLEYVEESKLFDLGERD 192
Query: 93 QAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLL-NCYCKELMTEKAEALLEKMKE 151
A +DLVAKV GI AE Y ++P + + + Y +LL NC +K E + KMK+
Sbjct: 193 YASRVDLVAKVHGIYKAEKYIENVPASHRGEVVYRTLLANCVAIA-NVKKTEQVFNKMKD 251
Query: 152 LNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISG 211
L + N L+ LY + +K+ ++ M+ ++ P +TY + + A DI
Sbjct: 252 LGFPVTVFSCNQLLLLYKRVDK-KKLGDVLTMMEKENVKPSLFTYKLLVDTKGAARDIED 310
Query: 212 AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 271
E+VI+ M+ DG + D + +A Y+ G EKAE L+++E + + + SA +F++
Sbjct: 311 MEKVIQAMQADG-IEPDLLIQATIARHYIFGGYREKAEAILEQIEGDDINENRSACKFVL 369
Query: 272 TLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCAT 331
LY G ++V RIW+ + N ++ I+ L D+ AE+ F+ T
Sbjct: 370 PLYAFLGKKADVERIWKVCEV---NARLDECMSAIEAFGKLGDVEKAEEIFENMFKTWKT 426
Query: 332 YDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDC 391
N M+ YA + + +EL +R G T + Y G+++ A
Sbjct: 427 LSFEYYNAMLKVYANKKLFDKGKELAKRMGDDGCRLGPSTLDSLVKLYSDAGEVEKADSI 486
Query: 392 LEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPL 451
L K K P T + + ++ DV AE +++ + ++ L
Sbjct: 487 LHKL-----SYKNKIKPLYTTYLMLLDSYSKKGDVHNAEKLFSKVRQMGYTGRIRQYQLL 541
Query: 452 IRTYAAAGRTSPVMLR-RLKMEKVEVSEASKKLLEA 486
+ Y A +T P + R+K + + + A LL A
Sbjct: 542 LEAYLNA-KTPPYGFKERMKADDIFPNRAVASLLAA 576
>gi|125525413|gb|EAY73527.1| hypothetical protein OsI_01409 [Oryza sativa Indica Group]
Length = 611
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 118/455 (25%), Positives = 203/455 (44%), Gaps = 13/455 (2%)
Query: 34 SSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGM-NKTVSD 92
S V V ++L + + E+ L LR RKLY AL+L E +E+ + + D
Sbjct: 153 SPRVDVAGATKKWLNDGNTLERSELFYVLLSLRKRKLYTKALQLLEYVEESKLFDLGERD 212
Query: 93 QAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKEL 152
A +DLVAKV GI AE Y ++P + + + Y +LL +K E + KMK+L
Sbjct: 213 YASRVDLVAKVHGIYKAEKYIENVPASHRGEVVYRTLLANCVAIANVKKTEQVFNKMKDL 272
Query: 153 NLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA 212
+ N L+ LY + +K+ ++ M+ ++ P +TY + + A DI
Sbjct: 273 GFPVTVFSCNQLLLLYKRVDK-KKLGDVLTMMEKENVKPSLFTYKLLVDTKGATRDIEDM 331
Query: 213 ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLIT 272
E+VI+ M+ DG + D + +A Y+ G EKAE L+++E + + + SA +F++
Sbjct: 332 EKVIQAMQADG-IEPDLLIQATIARHYIFGGYREKAEAILEQIEGDDINENRSACKFVLP 390
Query: 273 LYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY 332
LY G ++V RIW+ + N ++ I+ L D+ AE+ F+ T
Sbjct: 391 LYAFLGKKADVERIWKVCEV---NARLDECMSAIEAFGKLGDVEKAEEIFENMFKTWKTL 447
Query: 333 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 392
N M+ YA + + +EL +R G T + Y G+++ A L
Sbjct: 448 SFEYYNAMLKVYANKKLFDKGKELAKRMGDDGCRLGPSTLDSLVKLYSDAGEVEKADSIL 507
Query: 393 EKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLI 452
K K P T + + ++ DV AE +++ + ++ L+
Sbjct: 508 HKL-----SYKNKIKPLYTTYLMLLDSYSKKGDVHNAEKLFSKVRQMGYTGRIRQYQLLL 562
Query: 453 RTYAAAGRTSPVMLR-RLKMEKVEVSEASKKLLEA 486
Y A +T P + R+K + + + A LL A
Sbjct: 563 EAYLNA-KTPPYGFKERMKADDIFPNRAVASLLAA 596
>gi|56783681|dbj|BAD81093.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|56784204|dbj|BAD81589.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|125569936|gb|EAZ11451.1| hypothetical protein OsJ_01319 [Oryza sativa Japonica Group]
Length = 611
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 118/455 (25%), Positives = 203/455 (44%), Gaps = 13/455 (2%)
Query: 34 SSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGM-NKTVSD 92
S V V ++L + + E+ L LR RKLY AL+L E +E+ + + D
Sbjct: 153 SPRVDVAGATKKWLNDGNTLERSELFYVLLSLRKRKLYTKALQLLEYVEESKLFDLGERD 212
Query: 93 QAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKEL 152
A +DLVAKV GI AE Y ++P + + + Y +LL +K E + KMK+L
Sbjct: 213 YASRVDLVAKVHGIYKAEKYIENVPASHRGEVVYRTLLANCVAIANVKKTEQVFNKMKDL 272
Query: 153 NLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA 212
+ N L+ LY + +K+ ++ M+ ++ P +TY + + A DI
Sbjct: 273 GFPVTVFSCNQLLLLYKRVDK-KKLGDVLTMMEKENVKPSLFTYKLLVDTKGAARDIEDM 331
Query: 213 ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLIT 272
E+VI+ M+ DG + D + +A Y+ G EKAE L+++E + + + SA +F++
Sbjct: 332 EKVIQAMQADG-IEPDLLIQATIARHYIFGGYREKAEAILEQIEGDDINENRSACKFVLP 390
Query: 273 LYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY 332
LY G ++V RIW+ + N ++ I+ L D+ AE+ F+ T
Sbjct: 391 LYAFLGKKADVERIWKVCEV---NARLDECMSAIEAFGKLGDVEKAEEIFENMFKTWKTL 447
Query: 333 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 392
N M+ YA + + +EL +R G T + Y G+++ A L
Sbjct: 448 SFEYYNAMLKVYANKKLFDKGKELAKRMGDDGCRLGPSTLDSLVKLYSDAGEVEKADSIL 507
Query: 393 EKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLI 452
K K P T + + ++ DV AE +++ + ++ L+
Sbjct: 508 HKL-----SYKNKIKPLYTTYLMLLDSYSKKGDVHNAEKLFSKVRQMGYTGRIRQYQLLL 562
Query: 453 RTYAAAGRTSPVMLR-RLKMEKVEVSEASKKLLEA 486
Y A +T P + R+K + + + A LL A
Sbjct: 563 EAYLNA-KTPPYGFKERMKADDIFPNRAVASLLAA 596
>gi|413917311|gb|AFW57243.1| hypothetical protein ZEAMMB73_018964 [Zea mays]
Length = 514
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 183/386 (47%), Gaps = 17/386 (4%)
Query: 92 DQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKE 151
D + L+ AKV GI AE+ F+ +P+ + L Y +L+ + + A + KM+E
Sbjct: 115 DYSYLLEFTAKVHGISEAESLFLRVPQECRKELLYNNLVMAALDLNHIKHSYAYMRKMRE 174
Query: 152 LNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISG 211
L+L S +N L+ L++ G + I I+ +MKA ++P + TYN+ ++ A ++I G
Sbjct: 175 LSLPISPYVYNRLIILHSSPGRRKTISKILSQMKADRVVPHTSTYNILLKIQANEHNIDG 234
Query: 212 AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 271
RV MKR ++ + T+ LA + A L+ ++ +EN + S + L+
Sbjct: 235 LARVFNGMKR-AKIEPNEITYGILAIAHAVARLYTVCHTYVEAIENSMTGTNWSTLEILL 293
Query: 272 TLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCAT 331
LYG G E+ R W ++ P+ + S+ I+ + + AEK W +T
Sbjct: 294 ILYGYLGKEKELKRTWEIMQ-DLPHIRSKSFTLAIEAFGKVGSIDQAEKI---WIHIKST 349
Query: 332 YDIRVT---NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 388
+ +T N M+ Y + G ++ A + + R G PNA T+ + L++G +K A
Sbjct: 350 KKLSLTEQFNSMLSVYCRHGVVDKASSVFKEMRANGCQPNAITYRHLALGCLKSGLVKEA 409
Query: 389 VDCLEKAIDTGRGD-GGKWVPSS----ETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDL 443
++ ID G+ + K V SS ET + +F + D++ A+ L ++ L
Sbjct: 410 LN----TIDMGKKEVVTKKVRSSTPWLETTHLLLENFAEIGDLENAKRLYSELNESKYSL 465
Query: 444 GVEVFEPLIRTYAAAGRTSPVMLRRL 469
V+ L++ Y A P + R +
Sbjct: 466 NSFVYNTLLKAYVKAKVYEPDLSRTM 491
>gi|242043362|ref|XP_002459552.1| hypothetical protein SORBIDRAFT_02g006520 [Sorghum bicolor]
gi|241922929|gb|EER96073.1| hypothetical protein SORBIDRAFT_02g006520 [Sorghum bicolor]
Length = 421
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 190/423 (44%), Gaps = 20/423 (4%)
Query: 62 LKKLRDRKLYYPALKLSENMEKRGM-NKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS 120
L LR +++Y ALK E +++R + N D A HLDLVA+ GI+AAE Y +PE
Sbjct: 3 LFHLRKQRMYNKALKFMEWIDRRKLLNFEERDYASHLDLVARNHGIEAAEKYIERVPEAF 62
Query: 121 KNHLTYGSLL-NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
++ + Y +LL NC C++ +KAE + +++EL+L + N ++ LY + K+
Sbjct: 63 RSEVLYETLLVNCVCRD-DAQKAEQVFNEIRELSLPLTVSACNQMLLLYKRVSR-NKVVD 120
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I++ M+ +I P +TY + + ND G E V+ MK +G D+ + +A Y
Sbjct: 121 ILKLMENENIKPSLFTYKLMIDLKGRSNDTLGMESVLNLMKENG-FEPDFGIQTMVAKFY 179
Query: 240 VEAGLFEKAERALKELE---NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPN 296
+ L EKAE +E N N H A + L+ LY G +V RIW P
Sbjct: 180 ISGDLAEKAEEVTNAMEVYVNANRH----AIRSLLDLYAILGRPDDVERIWN--LCTEPK 233
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
+ +L I+ L + AE+ F + N M+ YA+ L+ ++
Sbjct: 234 LED--FLAAIKAWGKLGHIERAEETFDALVKTSPKLTSKYFNAMLYVYAENELLDKGKKF 291
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTF 416
ER G + TW+ Y+ +G++ A L + D P +
Sbjct: 292 IERMSLDGCPSSPLTWDAVVKLYVNSGELAKADSFLANVTE----DNPDRYPLFRSYVIL 347
Query: 417 MRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEV 476
++ F ++ D+ AE LK+ + L+ YA A T R+K +K
Sbjct: 348 LKAFAEKGDIHNAEKIFNRLKQTSYPARTLPYNLLLAAYANAQVTPYGFRERMKADKYSP 407
Query: 477 SEA 479
S++
Sbjct: 408 SKS 410
>gi|225434953|ref|XP_002281058.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial [Vitis vinifera]
Length = 550
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 192/423 (45%), Gaps = 12/423 (2%)
Query: 53 VFKWEVGDTLKKLRDRKLYYPALKLSE-NMEKRGMNKTVSDQAIHLDLVAKVQGIDAAEN 111
+ + + + +LR K AL++ E + +R D + L+ K+ GI E
Sbjct: 111 IHRGHIFHAINRLRKLKFNKRALEVMEWVVRERPYRPKELDYSYLLEFTTKLHGISQGEK 170
Query: 112 YFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKT 171
F +P +N L Y +L+ + + + A ++KM+EL S + FN L+ L++
Sbjct: 171 LFSHVPLEFQNELLYNNLVIACLDKGVIRLSLAYMKKMRELGHPISYLVFNRLIILHSSP 230
Query: 172 GHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTT 231
+ IP I+ +MKA + TYN+ M+ A ++I G +V EMK+ +V + +
Sbjct: 231 HRRKIIPRILTQMKADKVARHVSTYNILMKIEANEHNIEGLVKVFGEMKQQ-QVEPNEVS 289
Query: 232 FSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 291
+ LA+ + A L+ AE ++ +E + S LI LYG G +++ R W ++
Sbjct: 290 YCLLATAHAVAKLYTVAEAYVEAVEKSITGNNWSTLDVLIILYGYLGKPTDLERTWGIVQ 349
Query: 292 LAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLE 351
P+ + SY+ I+ + L AE+ + E +S N MI Y+K G ++
Sbjct: 350 -ELPHVRSKSYMLAIEAFGRIGQLNRAEELWLEIKSKKELKSTEQFNSMISVYSKHGFID 408
Query: 352 NAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDG-----GKW 406
A L G NA T+ + L+ G ++ A+ LE G+G K
Sbjct: 409 KASGLFREMEMNGCKANAITYRNLALGCLKAGLLEEALKTLE----LGKGLTISTRIRKS 464
Query: 407 VPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVML 466
+P ET + + F + DV+ AE E LK A V+ LI+ Y A P +L
Sbjct: 465 IPWLETTLSIVEIFSENGDVENAEKLFEELKTANYTRYTFVYNTLIKAYVKAKVYDPNLL 524
Query: 467 RRL 469
RR+
Sbjct: 525 RRM 527
>gi|302788498|ref|XP_002976018.1| hypothetical protein SELMODRAFT_415910 [Selaginella moellendorffii]
gi|300156294|gb|EFJ22923.1| hypothetical protein SELMODRAFT_415910 [Selaginella moellendorffii]
Length = 603
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 189/403 (46%), Gaps = 25/403 (6%)
Query: 93 QAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKEL 152
++ L++ A+ +GI AAE F +L K Y +LL Y +KAE L E+M +
Sbjct: 220 RSFQLEITARSKGIAAAEKLFEELSAEEKTRPVYNALLTRYVFLHNVKKAEGLFEEMDKA 279
Query: 153 NLGFSSMPF--NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDIS 210
S PF N +M LY G K ++++ K ++ P+ +TYNV + A D+
Sbjct: 280 GF-LSQSPFALNLMMKLYKHKGDNAKFQEMLEKAKDVAVEPNIFTYNVMLDLKAKAGDVE 338
Query: 211 GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 270
G E++ EEMK + D T++ L Y++AGL +KAE +L +E R + ++++
Sbjct: 339 GMEKIFEEMKLNPNAKPDGTSYFTLCKGYLKAGLTDKAEVSLLRMEVGPFRRTKATFEYM 398
Query: 271 ITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK---EWES 327
+ YGQ G +S+V R+W+ ++ P S+L + + ++ + FK +W+
Sbjct: 399 MLAYGQLGLISDVERMWQKCKMV-PGDGFNSFLAFQRAMALAGEVQRVDSMFKHMDKWKR 457
Query: 328 GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKL 387
T D++ N ++ AY K+G +EL+++ WE K
Sbjct: 458 S-KTVDLKRHNNLLLAYYKKGMKCEIKELEKKMNEMDLRVTLVDWE------------KE 504
Query: 388 AVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEV 447
+ + A R D K + + R + ++ DV AE E KA + V V
Sbjct: 505 PIKMSKAAKAVVRKDKEKEMAA----RKGLEEAVEKADVKAAESAFEKC-KAGNMAKVGV 559
Query: 448 FEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAICVE 490
+ L++ Y A + L+R+K E VE +E + LL+ + VE
Sbjct: 560 WNKLLKAYVNAQVPAYGFLQRMKAEGVEANEETHSLLKKLQVE 602
>gi|356534606|ref|XP_003535844.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Glycine max]
Length = 600
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 125/455 (27%), Positives = 212/455 (46%), Gaps = 24/455 (5%)
Query: 28 RLFKK--GSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEK-R 84
+LFK + +SV L+++ K + + E+ +++LR RK+Y A +L + +E +
Sbjct: 136 KLFKVILNAPGLSVDSALSKWAGQGKELSRKEIFLAVRELRRRKMYGRAFQLFQWLESNK 195
Query: 85 GMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLL-NCYCKELMTEKAE 143
+ SD A LDL+AK++G+ AE Y +PE+ + L Y +LL NC + + +E
Sbjct: 196 KLEFMESDYASQLDLIAKLRGLPQAEKYIESVPESFRGELLYRTLLANCASQNNLI-ASE 254
Query: 144 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 203
+ KMK+L+L + N L+ LY K +KI ++ M+ ++ P +TY + + +
Sbjct: 255 KIFNKMKDLDLPLTVFACNQLLLLYKKL-DKKKIADVLLLMEKENVKPSLFTYRILIDSK 313
Query: 204 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 263
NDI+G E+V E MK +G D + LA Y AGL EKAE LKE+E N
Sbjct: 314 GHSNDIAGMEQVFETMKEEG-FEPDIQLQALLARHYTSAGLKEKAEAILKEIEGENLEEK 372
Query: 264 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF- 322
L+ LY G EV RIW+ + P + L ++ L+ + AE F
Sbjct: 373 QWVCATLLRLYANLGKADEVERIWKVCE-SKPRVDDC--LAAVEAWGKLEKIEEAEAVFE 429
Query: 323 ---KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 379
K+W+ Y I ++ YA L ++L +R G TW Y
Sbjct: 430 MASKKWKLNSKNYSI-----LLKIYANNKMLAKGKDLIKRMADSGLRIGPLTWNALVKLY 484
Query: 380 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 439
++ G+++ A L+KAI + P T + + + DV +E +++A
Sbjct: 485 IQAGEVEKADSVLQKAIQQ-----SQLQPMFTTYLDILEQYAKRGDVHNSEKIFLKMRQA 539
Query: 440 VDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKV 474
+ F+ L++ Y A + + R+K + +
Sbjct: 540 GYTSRISQFKVLMQAYVNAKVPAYGIRERMKADNL 574
>gi|356547249|ref|XP_003542028.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Glycine max]
Length = 507
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 174/380 (45%), Gaps = 5/380 (1%)
Query: 92 DQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSL-LNCYCKELMTEKAEALLEKMK 150
D + ++ K+ GI E F +P +N L Y +L + C K ++ E ++KM+
Sbjct: 108 DYSYLVEFTTKLHGISHGEKLFSRIPVEFQNELLYNNLVIACLDKGVIKLSLE-YMKKMR 166
Query: 151 ELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDIS 210
EL S + FN L+ L++ G + IP ++ +MKA + P TYN+ M+ A +++
Sbjct: 167 ELGFLISHLVFNRLIILHSSPGRRKMIPKLLTQMKADKVTPHVSTYNILMKIEANEHNLE 226
Query: 211 GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 270
+ MK +VA + ++ LA + A L+ E ++ +E + S L
Sbjct: 227 NLVKFFSRMK-VAQVAPNEISYCILAIAHAVARLYTATEAYVEAVEKSITGNNWSTLDVL 285
Query: 271 ITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCA 330
+ LYG GN E+ R+W ++R P+ + SY+ I+ + L AE+ + E ES
Sbjct: 286 LMLYGYLGNQKELERVWATIR-ELPSVRSKSYMLAIEAFGRIGQLNQAEELWLEMESTKG 344
Query: 331 TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
+ N M+ Y K G + A +L + + G PNA T+ + L++G + +
Sbjct: 345 LKSVEQFNSMMSVYCKHGFIGKAAKLYKNMKASGCKPNAITYRQLALGCLKSGMAEQGLK 404
Query: 391 CLEKAID-TGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFE 449
L+ + T +P ET + + F ++ D+ E E K+ V+
Sbjct: 405 TLDLGLRLTISKRVRNSIPWLETTLSIVEIFAEKGDMGNVERLFEEFHKSKYCRYTFVYN 464
Query: 450 PLIRTYAAAGRTSPVMLRRL 469
LI+ Y A P +L+R+
Sbjct: 465 TLIKAYVKAKIYDPNLLKRM 484
>gi|242078281|ref|XP_002443909.1| hypothetical protein SORBIDRAFT_07g004200 [Sorghum bicolor]
gi|241940259|gb|EES13404.1| hypothetical protein SORBIDRAFT_07g004200 [Sorghum bicolor]
Length = 521
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 181/383 (47%), Gaps = 11/383 (2%)
Query: 92 DQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKE 151
D + L+ AKV GI AE+ F+ +P+ + L Y +L+ + + + A + KM+E
Sbjct: 122 DYSYLLEFTAKVHGISEAESLFLRVPQEYQKELLYNNLVMAALDLDLIKHSYAYMRKMRE 181
Query: 152 LNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISG 211
L+L S +N L+ L++ + I I+ +MKA + P + TYN+ ++ A ++I G
Sbjct: 182 LSLPISPYVYNRLIILHSSPSRRKTISKILYQMKADRVTPHTSTYNILLKIQANEHNIDG 241
Query: 212 AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 271
RV +MKR ++ + T+ LA + A L+ ++ +EN + S + L+
Sbjct: 242 LARVFSDMKR-AKIEPNEITYGILAISHAVARLYTVCHTYVEAIENSMTGTNWSTLEILL 300
Query: 272 TLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCAT 331
LYG G E+ R W ++ P+ + S+ I+ + + AEK + + +S
Sbjct: 301 ILYGYLGKEKELKRTWEIMQ-DLPHVRSKSFTVAIEAFGKVGSIDQAEKIWVQIKSTKKL 359
Query: 332 YDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDC 391
N ++ Y + G ++ A + + R G PNA T+ + L++G +K A++
Sbjct: 360 SLTEQFNSILSVYCRHGVVDKASSVFKEMRANGCQPNAITYRHLALGCLKSGLVKEALNT 419
Query: 392 LEKAIDTGRGD-GGKWVPSS----ETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVE 446
ID G+ + K V SS ET + +F + D++ A+ L ++
Sbjct: 420 ----IDMGKKEVVTKKVRSSTPWLETTHLLLENFAEIGDLENAKRLYSELNESKYSRNSF 475
Query: 447 VFEPLIRTYAAAGRTSPVMLRRL 469
V+ L++ Y A P +LR +
Sbjct: 476 VYNTLLKAYVKAKVYEPDLLRTM 498
>gi|356557435|ref|XP_003547021.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Glycine max]
Length = 507
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 179/384 (46%), Gaps = 13/384 (3%)
Query: 92 DQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSL-LNCYCKELMTEKAEALLEKMK 150
D + ++ K+ GI E F +P ++ L Y +L + C K ++ E ++KM+
Sbjct: 108 DYSYLVEFTTKLHGISHGEKLFSRIPVEFQSELLYNNLVIACLDKGVIKLSLE-YMKKMR 166
Query: 151 ELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDIS 210
EL S + FN L+ L++ G + IP ++ +MKA + P TYN+ M+ A +++
Sbjct: 167 ELGFPISHLVFNRLIILHSSPGRRKMIPKLLTQMKADKVTPHVSTYNILMKIEANEHNLE 226
Query: 211 GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 270
+V MK +V + ++ LA + A L+ E ++ +E + S L
Sbjct: 227 NLVKVFGRMK-VAQVEPNEISYCILAIAHAVARLYTATEAYVEAVEKSITGNNWSTLDVL 285
Query: 271 ITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCA 330
+ LYG GN E+ R+W +++ P+ + SY+ I+ + L AE+ + E +S
Sbjct: 286 LMLYGYLGNQKELERVWATIQ-ELPSIRSKSYMLAIEAFGRIGQLNRAEEIWLEMKSTKG 344
Query: 331 TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
+ N M+ Y K G ++ A +L + + G PNA T+ + L++G + A+
Sbjct: 345 LKSVEQFNSMMSVYCKHGFIDRAAKLYKNMKASGCKPNAITYHQLALGCLKSGMAEQAL- 403
Query: 391 CLEKAIDTG-RGDGGKWV----PSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGV 445
K +D G R K V P ET + + F ++ DV E E KA
Sbjct: 404 ---KTLDLGLRLTISKRVRNSTPWLETTLSIVEIFAEKGDVGNVERLFEEFHKAKYCRYT 460
Query: 446 EVFEPLIRTYAAAGRTSPVMLRRL 469
V+ LI+ Y A +P +L+R+
Sbjct: 461 FVYNTLIKAYVKAKIYNPNLLKRM 484
>gi|357119107|ref|XP_003561287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Brachypodium distachyon]
Length = 576
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 174/366 (47%), Gaps = 9/366 (2%)
Query: 34 SSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRG--MNKTVS 91
+ +SV+ L+++++ ++ + EV L L+ ++LY+ A + E +E RG +N
Sbjct: 119 AHSLSVKSVLDKWIEDGNQLERNEVLLVLFHLKKQRLYWKAFQFMEWIE-RGHLLNFEER 177
Query: 92 DQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKE 151
D A HLDL+A+ GI+ A Y +P+ +N + Y +LL + +KAE + ++++
Sbjct: 178 DYACHLDLIARNTGIEDARKYIDRVPKPFRNEVLYETLLVNCVRARDIQKAEEVFREIRD 237
Query: 152 LNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISG 211
L+L + N ++ LY + K+ II M+ +I P +TY + + NDISG
Sbjct: 238 LSLPLTVSACNQMILLYKRVAR-TKVADIIMLMEKENIKPSPFTYKLIIDLKGRSNDISG 296
Query: 212 AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 271
E + EMK G V D+ T + +A Y+ GL EKA+ + E+E A + L+
Sbjct: 297 VEVTLNEMKAAG-VEPDFVTQTMVAKFYISGGLIEKAKAVVSEIEMEYMKDKRHAVRSLL 355
Query: 272 TLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCAT 331
LY EV RIW+ P + ++ I+ L + AE+ F+
Sbjct: 356 HLYAALSKPDEVARIWK--LCTEPKLDD--FMAAIEAWGKLGCIEQAEETFEAMLEATQK 411
Query: 332 YDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDC 391
+ N M+ YA+ ++ ++ ER G TW+ Y+ +G++ A
Sbjct: 412 LSSKYYNGMLNVYAENKLMDKGKKFVERMSFDGCPNGPLTWDALVKLYVNSGEVAKADSF 471
Query: 392 LEKAID 397
L+ A +
Sbjct: 472 LQNATE 477
>gi|125557709|gb|EAZ03245.1| hypothetical protein OsI_25393 [Oryza sativa Indica Group]
Length = 610
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 188/387 (48%), Gaps = 17/387 (4%)
Query: 6 RFGRTKNIAKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKL 65
R G TK K + +L + + D + S+R L+++++ ++ + + L L
Sbjct: 133 RSGDTKLQNKTYRSYLFQIVLD------APSNSLRHVLDKWIEDGNQLERNDAMLVLFHL 186
Query: 66 RDRKLYYPALKLSENMEK-RGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHL 124
+ + +Y AL+ E ME+ + +N D A HLDL+A+ GI+ A+ Y +P +N +
Sbjct: 187 KKQHMYRKALQFVEWMERGKLLNFEKRDYACHLDLIARSHGIETAQKYIKRVPLPFRNEV 246
Query: 125 TYGSLL-NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
Y +L+ NC + +KAE + +++K+L L + N ++ LY + P K+ +++
Sbjct: 247 LYETLIVNCVLAGDI-QKAEEVFKEIKDLCLRLTVTLCNQMILLYKRIA-PGKVASVLML 304
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ ++ P ++TY + + ND++G E VI EMK G + +T + +A Y+ G
Sbjct: 305 MEKENVKPSAFTYRLLIDLKGRSNDLAGIEVVINEMKAYG-IEPSTSTQTMVARFYIHGG 363
Query: 244 LFEKAERALKELENR--NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
L EKAE +KE+E + N+ + L+ LY ++V RIW
Sbjct: 364 LTEKAEAVVKEMEAQLSNSKDGRHVIKSLLHLYAALNKPNDVARIWEMCTEPMLE----D 419
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
+L+ I+ L + AE+ F+ + + N M+ YA+ L ++ ER
Sbjct: 420 FLSAIKAWGELGLIEKAEETFEAMANAPEKLSSKYYNAMLNVYAQNKLLSKGKQFVERMC 479
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLA 388
R G TW+ + Y+ +G+++ A
Sbjct: 480 RDGCPNGPLTWDALINLYVNSGEVEKA 506
>gi|449457725|ref|XP_004146598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 227
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 124/201 (61%), Gaps = 1/201 (0%)
Query: 21 LEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSEN 80
+++ LY R+ G ++SV L+Q++ + V + E+ +K+LR K + AL++S+
Sbjct: 27 VKDNLYRRISPVGDPNISVTPLLDQWVLEGRLVQQDELRHIIKELRVYKRFKHALEISKW 86
Query: 81 M-EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMT 139
M +KR + +D AI ++L+ +V G++ E+YF ++P K + + +LLNCY E
Sbjct: 87 MSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYFDNMPSQLKRYQVHIALLNCYAHEKCV 146
Query: 140 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 199
+KA A ++K+KE+ S +P+N +M LY + G E++ ++++EMK + D +TY++
Sbjct: 147 DKANAFMQKIKEMGFANSPLPYNIMMNLYHQIGEFERLDSLLKEMKERGVYYDRFTYSIR 206
Query: 200 MRALAAVNDISGAERVIEEMK 220
+ A AA +D G E+++E+M+
Sbjct: 207 ISAYAAASDFRGIEKIMEQME 227
>gi|125535921|gb|EAY82409.1| hypothetical protein OsI_37623 [Oryza sativa Indica Group]
Length = 611
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 123/474 (25%), Positives = 211/474 (44%), Gaps = 19/474 (4%)
Query: 15 KRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPA 74
K+S+ L +AL + S V V L ++L + + E+ L LR RKLY A
Sbjct: 140 KKSQSTLLKALLE------SPRVDVAGALKKWLNDGNTLDRSELFYVLLSLRRRKLYIKA 193
Query: 75 LKLSENMEK-RGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCY 133
L+L E +E+ + ++ D A +DLVAK I AE Y ++P + + + Y +LL
Sbjct: 194 LQLLEYVEESKLIDLGERDYASRVDLVAKTHSIYKAEKYIENVPASHRGEIVYRTLLANC 253
Query: 134 CKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDS 193
+KAE + KMK+L S N L+ LY + +K+ ++ M+ ++ P
Sbjct: 254 VAIANVKKAEQVFNKMKDLGFPVSVFSCNQLLLLYKRVDK-KKLGDVLTMMEKENVKPSL 312
Query: 194 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 253
+TY + + A DI E+VI+ M+ DG + D + +A Y+ G EKAE L+
Sbjct: 313 FTYKLLVDTKGAARDIEDMEKVIQAMQADG-IEPDLLFQATIARHYIFGGYREKAEAILE 371
Query: 254 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLK 313
++ + + + SA +F++ LY G +V RIW ++ N ++ I+ L
Sbjct: 372 QMVGDDINENRSACKFVLPLYAFLGKNDDVERIW---KVCEANARLDECMSAIEAFGKLG 428
Query: 314 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 373
D+ AE+ F T + N M+ YA + + +EL +R G T +
Sbjct: 429 DVEKAEEIFDNMFKTWKTLSSKYYNAMLKVYANKKLFDKGKELAKRMGDDGCRLGPYTLD 488
Query: 374 IFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 433
Y G+++ A L K K P T + + ++ DV AE
Sbjct: 489 SLVKLYSDAGEVEKADSILHKL-----SYKNKIKPMYTTYLMLLDSYSKKGDVHNAEKLF 543
Query: 434 EILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLR-RLKMEKVEVSEASKKLLEA 486
+++ + ++ L+ Y A +T P + R+K + + + A LL A
Sbjct: 544 SKVRQMGYTGRIRQYQLLLEAYLNA-KTPPYGFKERMKADDIFPNRAVASLLAA 596
>gi|414884017|tpg|DAA60031.1| TPA: hypothetical protein ZEAMMB73_016344 [Zea mays]
Length = 703
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 121/468 (25%), Positives = 212/468 (45%), Gaps = 31/468 (6%)
Query: 20 HLEEALYDRLFKK-------GSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYY 72
H E+ L D FK +S S+ L+ ++K R+ + +V L LR +++Y
Sbjct: 236 HHEKELADTPFKPFLFQIVLDTSMSSLMPVLDGWVKIGNRLERDKVNMVLFHLRKQRMYN 295
Query: 73 PALKLSENMEKRGM-NKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLL- 130
ALK E +E+R + N D A HLDL+A+ G++AA+ Y +PE ++ + Y +LL
Sbjct: 296 KALKFVEWIERRKLLNFEERDYASHLDLIARNYGVEAAQKYIERVPEAFRSEVLYETLLV 355
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
NC C++ +KAE + +++EL+L + N ++ LY + K+ I+ M+ +I
Sbjct: 356 NCVCRD-DAQKAEQVFNEIRELSLPLTISACNQMLLLYKRVSR-NKVVDILTLMEKENIK 413
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
+TY + + NDI G E+V+ MK +G + ++T + +A Y+ EKAE
Sbjct: 414 YSIFTYKLMIDLKVRSNDILGMEQVLNSMKENG-LEPNFTIQTMVAKFYISGCFTEKAEE 472
Query: 251 ALKELE-----NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
+ +E NR+A R L+ LY G +V R+W A P + +L
Sbjct: 473 VINAMEVHVKANRHAVRS------LLDLYAILGRPVDVERVWN--LCAEPKLED--FLAA 522
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
I+ L + AE+ F + N M+ YA+ L+ +++ ER G
Sbjct: 523 IKAWSKLGHIERAEEIFDVLVKTFPKLTSKYFNAMLEVYAENKLLDKSKKFIERMCLDGC 582
Query: 366 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKD 425
TW+ Y+ G++ A L + D P + ++ + ++ D
Sbjct: 583 TIGPLTWDAVVKLYVNLGELSKADSFLMNVTE----DNPDRHPLFSSYVILLKAYAEKGD 638
Query: 426 VDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEK 473
+ AE + +K+ + L+ YA+A T R+K +K
Sbjct: 639 IHNAEKIFDRVKQTNFPARTLPYNLLLAAYASAQVTPYGFRERMKADK 686
>gi|125599572|gb|EAZ39148.1| hypothetical protein OsJ_23575 [Oryza sativa Japonica Group]
Length = 610
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 188/387 (48%), Gaps = 17/387 (4%)
Query: 6 RFGRTKNIAKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKL 65
R G TK K + +L + + D + S+R L+++++ ++ + + L L
Sbjct: 133 RSGDTKLQNKTYRSYLFQIVLD------APSNSLRHVLDKWIEDGNQLERNDAMLVLFHL 186
Query: 66 RDRKLYYPALKLSENMEK-RGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHL 124
+ + +Y AL+ E ME+ + +N D A HLDL+A+ GI+ A+ Y +P +N +
Sbjct: 187 KKQHMYRKALQFVEWMERGKLLNFEKRDYACHLDLIARSHGIETAQKYIKRVPLPFRNEV 246
Query: 125 TYGSLL-NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
Y +L+ NC + +KAE + +++K+L L + N ++ LY + P K+ +++
Sbjct: 247 LYETLIVNCVLAGDI-QKAEEVFKEIKDLCLRLTVTLCNQMILLYKRIA-PGKVASVLML 304
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ ++ P ++TY + + ND++G E V+ EMK G + +T + +A Y+ G
Sbjct: 305 MEKENVKPSAFTYRLLIDLKGRSNDLAGIEVVLNEMKAYG-IEPSTSTQTMVARFYIHGG 363
Query: 244 LFEKAERALKELENR--NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
L EKAE +KE+E + N+ + L+ LY ++V RIW
Sbjct: 364 LTEKAEAVVKEMEAQLSNSKDGRHVIKSLLHLYAALNKPNDVARIWEMCTEPMLE----D 419
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
+L+ I+ L + AE+ F+ + + N M+ YA+ L ++ ER
Sbjct: 420 FLSAIKAWGELGLIEKAEETFEAMANAPEKLSSKYYNAMLNVYAQNKLLSKGKQFVERMC 479
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLA 388
R G TW+ + Y+ +G+++ A
Sbjct: 480 RDGCPNGPLTWDALINLYVNSGEVEKA 506
>gi|302764000|ref|XP_002965421.1| hypothetical protein SELMODRAFT_406783 [Selaginella moellendorffii]
gi|300166235|gb|EFJ32841.1| hypothetical protein SELMODRAFT_406783 [Selaginella moellendorffii]
Length = 584
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 184/397 (46%), Gaps = 25/397 (6%)
Query: 99 LVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSS 158
+ A+ +GI AAE F +L K Y +LL Y +KAE L E+M + S
Sbjct: 207 ITARSKGIAAAEKLFEELSAEEKTRPVYNALLTRYVFLHNVKKAEGLFEEMDKAGF-LSQ 265
Query: 159 MPF--NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
PF N +M LY G K ++++ K ++ P+ +TYNV + A D+ G E++
Sbjct: 266 SPFALNLMMKLYKHKGDNAKFQEMLEKAKDVAVEPNIFTYNVMLDLKAKAGDVEGMEKIF 325
Query: 217 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 276
EEMK + D T++ L Y++AGL +KAE +L +E R + +++++ YGQ
Sbjct: 326 EEMKLNPNAKPDGTSYFTLCKGYLKAGLTDKAEVSLLRMEVGPFRRTKATFEYMMLAYGQ 385
Query: 277 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK---EWESGCATYD 333
G +S+V R+W+ ++ P S+L + + ++ + FK +W+ T D
Sbjct: 386 LGLISDVERMWQKCKMV-PGDGFNSFLAFQRAMALAGEVQRVDSMFKHMDKWKRS-KTVD 443
Query: 334 IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
++ N ++ AY K+G +EL+++ WE K + +
Sbjct: 444 LKRHNNLLLAYYKKGMKCEIKELEKKMNEMDLRVTLVDWE------------KEPIKMSK 491
Query: 394 KAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIR 453
A R D K + R + ++ DV AE E KA + V V+ L++
Sbjct: 492 AAKAVVRKDKEKETAA----RKGLEEAVEKADVKAAESAFEKC-KAGNMAKVGVWNKLLK 546
Query: 454 TYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAICVE 490
Y A + L+R+K E VE +E + LL+ + VE
Sbjct: 547 AYVNAQVPAYGFLQRMKAEGVEANEETHSLLKKLQVE 583
>gi|357131430|ref|XP_003567340.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Brachypodium distachyon]
Length = 612
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 201/439 (45%), Gaps = 22/439 (5%)
Query: 39 VRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVS-DQAIHL 97
V L +++ V + +V + LR R+ + AL+L E +E+ + + V D A L
Sbjct: 160 VSGTLKKWVNDGNTVDRSDVFFAVLNLRRRRFFSKALQLLEWLEESKLIELVERDYASRL 219
Query: 98 DLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFS 157
DL+AKV GI AE + ++P + + + Y +LL E+ +KAE + KMK+L +
Sbjct: 220 DLMAKVHGIYKAEKFIDNIPASLRGEIVYRTLLANCVAEVNVKKAEEVFNKMKDLGFPVT 279
Query: 158 SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIE 217
N L+ LY + +KI ++ M+ + P +TY + + A DI G E+V++
Sbjct: 280 VFAINQLLLLYKRVDK-KKISDVLTMMEKEDVKPSLFTYKLLVDTKGASRDIEGMEKVVQ 338
Query: 218 EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQT 277
M+ +G + D + +A Y+ G EKAE L+ +E + + +A + ++ LY
Sbjct: 339 SMEAEG-ITPDLLLQATIAKHYIFGGHREKAEAILESMEG-DMKENRNACKMVMPLYAFL 396
Query: 278 GNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC----FKEWESGCATYD 333
G +V RIW+ + NT L+ I+ L D+ AE+ FK W++ + Y
Sbjct: 397 GKKDDVERIWKVCQ---SNTRLDECLSAIEAFGRLGDVEKAEEVFGNMFKTWKTLSSKY- 452
Query: 334 IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
N M+ YA + ++ +EL +R G T + Y+ G+++ A L
Sbjct: 453 ---YNAMMRVYANQNLMDKGKELAKRMEEDGCRLGISTLDSLVKLYVDAGEVEKAESLLH 509
Query: 394 KAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIR 453
K K P + + + + DV +E L++ + + ++ L+
Sbjct: 510 KL-----SVKNKMKPQYSSYLMLLDSYSKIGDVHNSEKVFSKLRQMGYNGRIRQYQLLLH 564
Query: 454 TYAAAGRTSPVMLRRLKME 472
Y A +PV R +M+
Sbjct: 565 AYLHA--KAPVYGFRERMK 581
>gi|22331104|ref|NP_188178.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273796|sp|Q9LRP6.1|PP234_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g15590, mitochondrial; Flags: Precursor
gi|11994226|dbj|BAB01348.1| DNA-binding protein [Arabidopsis thaliana]
gi|20856658|gb|AAM26678.1| AT3g15590/MQD17_5 [Arabidopsis thaliana]
gi|27363266|gb|AAO11552.1| At3g15590/MQD17_5 [Arabidopsis thaliana]
gi|332642175|gb|AEE75696.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 610
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 127/474 (26%), Positives = 211/474 (44%), Gaps = 29/474 (6%)
Query: 9 RTKNIAKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDR 68
+K+ K +KK + LY+ + + SV+ L +++K K + + EV + LR R
Sbjct: 131 HSKDGGKPTKKRGQSELYESIV----AYKSVKHVLEKWVKEGKDLSQAEVTLAIHNLRKR 186
Query: 69 KLYYPALKLSENMEKRGMNK----TVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHL 124
K Y L+L E + G N T ++ A LDLVAKV + AE + D+PE+S+ +
Sbjct: 187 KSYAMCLQLWEWL---GANTQFEFTEANYASQLDLVAKVHSLQKAEIFLKDIPESSRGEV 243
Query: 125 TYGSLL-NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
Y +LL NC K KAE + KMKEL S N L+ LY+ +KI ++
Sbjct: 244 VYRTLLANCVLKH-HVNKAEDIFNKMKELKFPTSVFACNQLLLLYSMHDR-KKISDVLLL 301
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ +I P TY+ + + DI+G E+++E +K +G + D S LA Y+ AG
Sbjct: 302 MERENIKPSRATYHFLINSKGLAGDITGMEKIVETIKEEG-IELDPELQSILAKYYIRAG 360
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
L E+A+ +KE+E + + + L+ LY G+ V R+ R + N Y
Sbjct: 361 LKERAQDLMKEIEGKGLQQTPWVCRSLLPLYADIGDSDNVRRLSRFV------DQNPRYD 414
Query: 304 NMIQVLV---NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
N I + LK++ AE F+ + + ++ Y + L +L +R
Sbjct: 415 NCISAIKAWGKLKEVEEAEAVFERLVEKYKIFPMMPYFALMEIYTENKMLAKGRDLVKRM 474
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 420
G TW Y++ G++ A L +A K P T + +
Sbjct: 475 GNAGIAIGPSTWHALVKLYIKAGEVGKAELILNRATKD-----NKMRPMFTTYMAILEEY 529
Query: 421 EQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKV 474
+ DV E +K+A + +E ++ Y A + M+ R+K + V
Sbjct: 530 AKRGDVHNTEKVFMKMKRASYAAQLMQYETVLLAYINAKTPAYGMIERMKADNV 583
>gi|297834428|ref|XP_002885096.1| hypothetical protein ARALYDRAFT_479008 [Arabidopsis lyrata subsp.
lyrata]
gi|297330936|gb|EFH61355.1| hypothetical protein ARALYDRAFT_479008 [Arabidopsis lyrata subsp.
lyrata]
Length = 605
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 126/469 (26%), Positives = 207/469 (44%), Gaps = 29/469 (6%)
Query: 14 AKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYP 73
K +KK + LY+ + + SV+ L +++K K + + EV + LR RK Y
Sbjct: 131 GKPTKKRAQSELYESIV----AYKSVKHVLEKWVKEGKDLSQAEVSLAIFHLRKRKYYAM 186
Query: 74 ALKLSENMEKRGMNK----TVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSL 129
L+L E + G N T ++ A LDLVAKV + AEN+ D+PE+ + + Y +L
Sbjct: 187 CLQLWEWL---GANTQFEFTEANYASQLDLVAKVHSLQKAENFLKDIPESFRGEVVYRTL 243
Query: 130 L-NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS 188
L NC K KAE L KMKEL S N L+ LY+ +KI ++ M+ +
Sbjct: 244 LANCVLKH-HVNKAEDLFNKMKELKFPTSVFACNQLLLLYSMHDR-KKISDVLLLMEREN 301
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
I P TY + + DI+G E+++E MK +G + D + LA Y+ AGL E+A
Sbjct: 302 IKPSRGTYQFLINSKGLAGDITGMEKIVETMKEEG-IEVDPELQATLAKYYIRAGLKERA 360
Query: 249 ERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQV 308
+ +KE+E + + + L+ LY G+ V RL+ N+ Y N I
Sbjct: 361 QDLMKEIEGKGLQQTPWVCRSLLPLYADIGDSDNVR------RLSTFVDQNLRYDNCISA 414
Query: 309 LV---NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
+ LK++ AE F+ + + ++ Y + L ++L +R G
Sbjct: 415 IRAWGKLKEVEEAEAVFERLVEKYKIFPMLPYFALMEIYTENKMLAKGKDLVKRMGNAGV 474
Query: 366 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKD 425
TW Y++ G++ A L +A K P + + + + D
Sbjct: 475 TIGPSTWHALVKLYIKAGEVGKAELILNRATKD-----NKMRPMFISYMAILEEYAKRGD 529
Query: 426 VDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKV 474
V E +K+A + +E ++ Y A + M R+K + V
Sbjct: 530 VHNTEKVFMKMKRASYAAQLMQYETVLLAYIKAKTPAYGMFERMKADNV 578
>gi|125602283|gb|EAZ41608.1| hypothetical protein OsJ_26140 [Oryza sativa Japonica Group]
Length = 524
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 180/391 (46%), Gaps = 5/391 (1%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKEL-MT 139
M +R + D + L+ AKV GI AE+ F+ +P+ +N L Y +L+ C +L +
Sbjct: 107 MRERPYKLSELDYSYLLEFTAKVHGISEAESLFLRIPQEYQNELLYNNLVMA-CLDLGLI 165
Query: 140 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 199
+ A KM+EL+L S +N L+ L++ G + I I+ +MK + P + TYN+
Sbjct: 166 KLAYGYKRKMRELSLPISPYVYNRLIILHSSPGRQKTISKILAQMKGDRVTPHTSTYNIL 225
Query: 200 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 259
++ A ++I G RV +MKR +V + T+ LA + A L+ + ++ +EN
Sbjct: 226 LKIKANEHNIDGVARVFNDMKR-AKVEPNEITYGILAIAHAVARLYTVSHTYVEAIENSM 284
Query: 260 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 319
+ S + L+ LYG G E+ W L P+ S++ I+ + + AE
Sbjct: 285 TGTNWSTLEILLILYGYHGKAKELKMTW-DLMQGLPHIRPKSFILAIEAFGKVGSIDQAE 343
Query: 320 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 379
+ + ++ES N ++ Y + G ++ A + + R G PNA T+ +
Sbjct: 344 EIWGKFESTRKPKLTEQFNSILSVYCRHGLVDKASAVFKEMRANGCQPNAITYRHLTLGC 403
Query: 380 LRNGDMKLAVDCLEKA-IDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 438
L+ G +K A+ ++ A + P ET + F + D+ A+ + L +
Sbjct: 404 LKAGIVKEALKTMDIAKKEVVTKKVKSSTPWLETTHMILESFAENGDLVNAKRVFDELNE 463
Query: 439 AVDDLGVEVFEPLIRTYAAAGRTSPVMLRRL 469
+ V+ L++ + A P +LR +
Sbjct: 464 SKYCRNSFVYNTLLKAHVKAKVYEPDLLRAM 494
>gi|115487560|ref|NP_001066267.1| Os12g0170100 [Oryza sativa Japonica Group]
gi|77553759|gb|ABA96555.1| DNA-binding protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113648774|dbj|BAF29286.1| Os12g0170100 [Oryza sativa Japonica Group]
gi|125578643|gb|EAZ19789.1| hypothetical protein OsJ_35368 [Oryza sativa Japonica Group]
gi|215767656|dbj|BAG99884.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 611
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 122/474 (25%), Positives = 211/474 (44%), Gaps = 19/474 (4%)
Query: 15 KRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPA 74
K+S+ L +AL + S V V L ++L + + E+ L LR RKLY A
Sbjct: 140 KKSQSTLLKALLE------SPRVDVAGALKKWLNDGNTLDRSELFYVLLILRRRKLYIKA 193
Query: 75 LKLSENMEK-RGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCY 133
L+L E +E+ + ++ D A +DLVAK I AE Y ++P + + + Y +LL
Sbjct: 194 LQLLEYVEESKLIDLGERDYASRVDLVAKTHSIYKAEKYIENVPASHRGEIVYRTLLANC 253
Query: 134 CKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDS 193
+KAE + KMK+L S N L+ LY + +K+ ++ M+ ++ P
Sbjct: 254 VAIANVKKAEQVFNKMKDLGFPVSVFSCNQLLLLYKRVDK-KKLGDVLTMMEKENVKPSL 312
Query: 194 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 253
+TY + + A DI E+VI+ M+ DG + D + +A Y+ G EK+E L+
Sbjct: 313 FTYKLLVDTKGAARDIEDMEKVIQAMQADG-IEPDLLFQATIARHYIFGGYREKSEAILE 371
Query: 254 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLK 313
++ + + + SA +F++ LY G +V RIW ++ N ++ I+ L
Sbjct: 372 QMVGDDINENRSACKFVLPLYAFLGKNDDVERIW---KVCEANARLDECMSAIEAFGKLG 428
Query: 314 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 373
D+ AE+ F T + N M+ YA + + +EL +R G T +
Sbjct: 429 DVEKAEEIFDNMFKTWKTLSSKYYNAMLKVYANKKLFDKGKELAKRMGDDGCRLGPYTLD 488
Query: 374 IFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 433
Y G+++ A L K K P T + + ++ DV AE
Sbjct: 489 SLVKLYSDAGEVEKADSILHKL-----SYKNKIKPMYTTYLMLLDSYSKKGDVHNAEKLF 543
Query: 434 EILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLR-RLKMEKVEVSEASKKLLEA 486
+++ + ++ L+ Y A +T P + R+K + + + A LL A
Sbjct: 544 SKVRQMGYTGRIRQYQLLLEAYLNA-KTPPYGFKERMKADDIFPNRAVASLLAA 596
>gi|449450908|ref|XP_004143204.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Cucumis sativus]
gi|449517541|ref|XP_004165804.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Cucumis sativus]
Length = 527
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 173/380 (45%), Gaps = 4/380 (1%)
Query: 92 DQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKE 151
D + L+ K GI E F ++P + L + +L+ + + A + KM+E
Sbjct: 127 DYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAYMRKMRE 186
Query: 152 LNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISG 211
+ S + FN L+ L++ + IP I+ +MKA + TYN+ M+ A ++I G
Sbjct: 187 VGHSISHLVFNRLIILHSSFRRRKIIPKILSQMKADKVPLHVSTYNILMKIEANEHNIEG 246
Query: 212 AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 271
RV +M+R +V + ++ +A+ + A L+ E ++ LE A + S Y LI
Sbjct: 247 LMRVFSDMRR-AKVEPNEVSYCIVATAHAVAKLYTVVEAYVEALEKSIAGNNWSTYDVLI 305
Query: 272 TLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCAT 331
LYG E+ R W ++ FP+ + S++ I+ + L AE+ + E ++
Sbjct: 306 ILYGYLNKEKELERTWGIIQ-GFPHIPSKSFILAIEAFGRIGLLSRAEELWLEMKTKRGI 364
Query: 332 YDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDC 391
N ++ Y + G ++ A E+ + G PNA T+ + L+ G ++ A+
Sbjct: 365 KATDQFNSILSVYCRHGLIKKATEIFRKIEANGCKPNAITFRHLAFGCLKAGLVEEALKT 424
Query: 392 LEKAIDTGRGDG--GKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFE 449
L+ +T K P ET + + + D++ E + LK+A V+
Sbjct: 425 LDLGSNTTSSTKIVRKSTPWLETTLSMIEILAERGDIENTEKLFKELKEAKYTRYTFVYN 484
Query: 450 PLIRTYAAAGRTSPVMLRRL 469
LI+ Y A +P +LRR+
Sbjct: 485 TLIKAYVKAKIHNPNLLRRM 504
>gi|297596551|ref|NP_001042753.2| Os01g0280400 [Oryza sativa Japonica Group]
gi|255673117|dbj|BAF04667.2| Os01g0280400, partial [Oryza sativa Japonica Group]
Length = 426
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 178/397 (44%), Gaps = 14/397 (3%)
Query: 92 DQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLL-NCYCKELMTEKAEALLEKMK 150
D A +DLVAKV GI AE Y ++P + + + Y +LL NC +K E + KMK
Sbjct: 27 DYASRVDLVAKVHGIYKAEKYIENVPASHRGEVVYRTLLANCVAIA-NVKKTEQVFNKMK 85
Query: 151 ELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDIS 210
+L + N L+ LY + +K+ ++ M+ ++ P +TY + + A DI
Sbjct: 86 DLGFPVTVFSCNQLLLLYKRVDK-KKLGDVLTMMEKENVKPSLFTYKLLVDTKGAARDIE 144
Query: 211 GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 270
E+VI+ M+ DG + D + +A Y+ G EKAE L+++E + + + SA +F+
Sbjct: 145 DMEKVIQAMQADG-IEPDLLIQATIARHYIFGGYREKAEAILEQIEGDDINENRSACKFV 203
Query: 271 ITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCA 330
+ LY G ++V RIW+ + N ++ I+ L D+ AE+ F+
Sbjct: 204 LPLYAFLGKKADVERIWKVCEV---NARLDECMSAIEAFGKLGDVEKAEEIFENMFKTWK 260
Query: 331 TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
T N M+ YA + + +EL +R G T + Y G+++ A
Sbjct: 261 TLSFEYYNAMLKVYANKKLFDKGKELAKRMGDDGCRLGPSTLDSLVKLYSDAGEVEKADS 320
Query: 391 CLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEP 450
L K K P T + + ++ DV AE +++ + ++
Sbjct: 321 ILHKL-----SYKNKIKPLYTTYLMLLDSYSKKGDVHNAEKLFSKVRQMGYTGRIRQYQL 375
Query: 451 LIRTYAAAGRTSPVMLR-RLKMEKVEVSEASKKLLEA 486
L+ Y A +T P + R+K + + + A LL A
Sbjct: 376 LLEAYLNA-KTPPYGFKERMKADDIFPNRAVASLLAA 411
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 69/339 (20%), Positives = 136/339 (40%), Gaps = 56/339 (16%)
Query: 44 NQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKV 103
NQ L KRV K ++GD L + + ++ +G + + D ++ V +
Sbjct: 97 NQLLLLYKRVDKKKLGDVLTMMEKENVKPSLFTYKLLVDTKGAARDIED----MEKVIQA 152
Query: 104 QGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMK--ELNLGFSSMPF 161
D E + + T H +G EKAEA+LE+++ ++N S+ F
Sbjct: 153 MQADGIEPDLL-IQATIARHYIFGG---------YREKAEAILEQIEGDDINENRSACKF 202
Query: 162 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 221
++ LYA G + I + + ++ + + + + A + D+ AE + E M +
Sbjct: 203 --VLPLYAFLGKKADVERIWKVCEVNARLDECMS---AIEAFGKLGDVEKAEEIFENMFK 257
Query: 222 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 281
+ + + ++ + +Y LF+K + K + + S L+ LY G +
Sbjct: 258 TWKTLS-FEYYNAMLKVYANKKLFDKGKELAKRMGDDGCRLGPSTLDSLVKLYSDAGEVE 316
Query: 282 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 341
+ I L SY N I+ L TY +++
Sbjct: 317 KADSILHKL----------SYKNKIKPLYT-------------------TY-----LMLL 342
Query: 342 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 380
+Y+K+G + NAE+L + R+ G + +++ + YL
Sbjct: 343 DSYSKKGDVHNAEKLFSKVRQMGYTGRIRQYQLLLEAYL 381
>gi|297800434|ref|XP_002868101.1| hypothetical protein ARALYDRAFT_915040 [Arabidopsis lyrata subsp.
lyrata]
gi|297313937|gb|EFH44360.1| hypothetical protein ARALYDRAFT_915040 [Arabidopsis lyrata subsp.
lyrata]
Length = 495
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 175/381 (45%), Gaps = 30/381 (7%)
Query: 22 EEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENM 81
++ L R+ + + + L + K +V ++ +K LR + AL+ SE M
Sbjct: 34 DQNLPSRIVTNSNQNAHITPMLASWQKQGHQVKPSDLRGFIKNLRGSNQFSKALEASEWM 93
Query: 82 -EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCK-ELMT 139
E++ + D + L LV V G++ AE +F +P+ ++ Y +LL+ Y K E
Sbjct: 94 GEQKVFDIVPEDYSARLHLVENVLGLEEAEKFFKSIPKNMTDYFVYATLLSSYTKSENTL 153
Query: 140 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 199
+KAEA EKM+EL PFNS+++LY + + + +++EM+ + + DS T N
Sbjct: 154 DKAEATFEKMRELGFLLKPSPFNSMISLYGQLQKLDMVEKLVREMQETKVECDSPTVNNV 213
Query: 200 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 259
+R A I E + G + + T +A Y+ +G EKA
Sbjct: 214 LRVYADTCKIKAMETFKTWVDEQG-IKLEGGTIVAMAKAYLRSGSIEKA----------- 261
Query: 260 AHRDLSAYQFLITLYGQT-GNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 318
I +YG G+ EVYR+W + N Y ++ L+ L ++ GA
Sbjct: 262 -----------IEMYGNVAGSEKEVYRLWDEYKKETKVNDN-GYRTVLSSLLKLDNVQGA 309
Query: 319 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE---IF 375
EK ++EW+ D+ + ++++ Y EG N +++ + R++ + + K + IF
Sbjct: 310 EKIYEEWKPEGPKLDMSIPSLLLSRYYAEGMEINIDQMVKSIRKKRYEMHLKKIKERLIF 369
Query: 376 SDYYLRNGDMKLAVDCLEKAI 396
+ +KL V+ + K+I
Sbjct: 370 IRRVIVVMGLKLKVEQMVKSI 390
>gi|302789381|ref|XP_002976459.1| hypothetical protein SELMODRAFT_416459 [Selaginella moellendorffii]
gi|300156089|gb|EFJ22719.1| hypothetical protein SELMODRAFT_416459 [Selaginella moellendorffii]
Length = 509
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 114/462 (24%), Positives = 205/462 (44%), Gaps = 34/462 (7%)
Query: 43 LNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKL-----SENMEKRGMNKTVSDQAIHL 97
+ Q+++ V + +++LR RK Y AL +E + G ++T+ L
Sbjct: 52 IKQWIREGNSVTSCGLDRVVRRLRSRKRYLQALMAVDWVANEKVIPFGYHETLQ----RL 107
Query: 98 DLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFS 157
DL ++ + F LP+ + Y LL Y K M E AE +++++ +G
Sbjct: 108 DLCSRCHHVTRTLLLFRRLPKQWRGEDAYCILLEMYYKRDMLEDAEKTMQELR--GIGIK 165
Query: 158 SM-PFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVN-DISGAERV 215
S+ P++ +++ Y G + ++ E+K S + D Y + + A + D+ E V
Sbjct: 166 SLQPYHLMLSFYKLRGMEMRFERMVTEIKGSGLALDRSFYTILLAARDSFGGDMVAVEDV 225
Query: 216 IEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL----SAYQFLI 271
+ EM+ G + D +A IY+ +GL K+ER L+ LE + S + ++
Sbjct: 226 LAEMEGRG-LKLDAVGCLAVAGIYLRSGLRHKSERVLQRLEKSLKSGEFKYSNSIRRRML 284
Query: 272 TLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCAT 331
++G+ G+ V RIW S+ + T ++ I+ + + AE + GC +
Sbjct: 285 AMFGKLGDRDAVDRIWHSIERSASTTVE-DFIFGIEAFGRVGKMDEAEDMY--MRVGCNS 341
Query: 332 YDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDC 391
+ R+ N + ++G + A L ER + + T+ + YL+ GD+ A
Sbjct: 342 CNPRLHNAFLAVLVEQGDVIRAVALVERMKGVRCLLSTVTYHLLIKVYLKAGDVSRAT-- 399
Query: 392 LEKAIDTGRGDGGK--WV-PSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDD---LGV 445
A ++ R GK W PSSET+ + F DV +E ++KK ++D L
Sbjct: 400 --LAFESLRSAFGKLEWPRPSSETLAVMLEFFVGTGDVQASE---RLVKKWMEDGFPLSA 454
Query: 446 EVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAI 487
VF L+R YA G R+ VE + +++LL I
Sbjct: 455 AVFHSLVRVYAKGGAGVDNFPGRMLSAGVEPTRETEQLLRQI 496
>gi|15222438|ref|NP_172238.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75163930|sp|Q940Q2.1|PPR19_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g07590, mitochondrial; Flags: Precursor
gi|15809864|gb|AAL06860.1| At1g07590/F22G5_2 [Arabidopsis thaliana]
gi|332190025|gb|AEE28146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 534
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 172/392 (43%), Gaps = 3/392 (0%)
Query: 97 LDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGF 156
L+ K+ G+ E F +P+ +N L Y +L+ + + A ++KM+EL
Sbjct: 140 LEFTVKLHGVSQGEKLFTRVPQEFQNELLYNNLVIACLDQGVIRLALEYMKKMRELGYRT 199
Query: 157 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
S + +N L+ + G + I + MKA P TY++ M+ A ++I G +
Sbjct: 200 SHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEANEHNIDGVLKAF 259
Query: 217 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 276
+ MK+ G V + ++ LA + A L+ AE +E+E + S L+ LYG+
Sbjct: 260 DGMKKAG-VEPNEVSYCILAMAHAVARLYTVAEAYTEEIEKSITGDNWSTLDILMILYGR 318
Query: 277 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 336
G E+ R W +R F + + SYL + + +L AE+ + E ++ +
Sbjct: 319 LGKEKELARTWNVIR-GFHHVRSKSYLLATEAFARVGNLDRAEELWLEMKNVKGLKETEQ 377
Query: 337 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 396
N ++ Y K+G +E A + G PN+ T+ + + MK A+ +E +
Sbjct: 378 FNSLLSVYCKDGLIEKAIGVFREMTGNGFKPNSITYRHLALGCAKAKLMKEALKNIEMGL 437
Query: 397 DTGRGDG-GKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 455
+ G P ET + + F ++ DV+ +E E +K A + V+ L + Y
Sbjct: 438 NLKTSKSIGSSTPWLETTLSIIECFAEKGDVENSEKLFEEVKNAKYNRYAFVYNALFKAY 497
Query: 456 AAAGRTSPVMLRRLKMEKVEVSEASKKLLEAI 487
A P + +R+ + S LL+ +
Sbjct: 498 VKAKVYDPNLFKRMVLGGARPDAESYSLLKLV 529
>gi|8778536|gb|AAF79544.1|AC022464_2 F22G5.3 [Arabidopsis thaliana]
Length = 555
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 172/392 (43%), Gaps = 3/392 (0%)
Query: 97 LDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGF 156
L+ K+ G+ E F +P+ +N L Y +L+ + + A ++KM+EL
Sbjct: 161 LEFTVKLHGVSQGEKLFTRVPQEFQNELLYNNLVIACLDQGVIRLALEYMKKMRELGYRT 220
Query: 157 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
S + +N L+ + G + I + MKA P TY++ M+ A ++I G +
Sbjct: 221 SHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEANEHNIDGVLKAF 280
Query: 217 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 276
+ MK+ G V + ++ LA + A L+ AE +E+E + S L+ LYG+
Sbjct: 281 DGMKKAG-VEPNEVSYCILAMAHAVARLYTVAEAYTEEIEKSITGDNWSTLDILMILYGR 339
Query: 277 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 336
G E+ R W +R F + + SYL + + +L AE+ + E ++ +
Sbjct: 340 LGKEKELARTWNVIR-GFHHVRSKSYLLATEAFARVGNLDRAEELWLEMKNVKGLKETEQ 398
Query: 337 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 396
N ++ Y K+G +E A + G PN+ T+ + + MK A+ +E +
Sbjct: 399 FNSLLSVYCKDGLIEKAIGVFREMTGNGFKPNSITYRHLALGCAKAKLMKEALKNIEMGL 458
Query: 397 DTGRGDG-GKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 455
+ G P ET + + F ++ DV+ +E E +K A + V+ L + Y
Sbjct: 459 NLKTSKSIGSSTPWLETTLSIIECFAEKGDVENSEKLFEEVKNAKYNRYAFVYNALFKAY 518
Query: 456 AAAGRTSPVMLRRLKMEKVEVSEASKKLLEAI 487
A P + +R+ + S LL+ +
Sbjct: 519 VKAKVYDPNLFKRMVLGGARPDAESYSLLKLV 550
>gi|297729251|ref|NP_001176989.1| Os12g0531500 [Oryza sativa Japonica Group]
gi|255670362|dbj|BAH95717.1| Os12g0531500 [Oryza sativa Japonica Group]
Length = 352
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 8/207 (3%)
Query: 278 GNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVT 337
GNL R+WR +R F ++ Y M+ L D+ AE + EWES T D R+
Sbjct: 138 GNLD---RVWRKMRETFRKFSDTEYKCMLTSLTRFGDIAEAESFYSEWESASGTRDSRIP 194
Query: 338 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
N ++ Y K G +E AE + ++G P+ TWE+F YL +G M ++CL+KA+
Sbjct: 195 NTILAFYIKNGMMEKAEGFLDHIVQKGVKPSYSTWELFVWGYLSDGRMDKVLECLKKALS 254
Query: 398 TGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAA 457
KW P+ + E++ D++ AE L + ++A + E++ ++RTYA
Sbjct: 255 CLE----KWDPNPQLATAIYSQIEEKGDIEAAEKLLVMFREA-GYVTTEIYNSVLRTYAK 309
Query: 458 AGRTSPVMLRRLKMEKVEVSEASKKLL 484
A ++ R+ +KV + + ++ LL
Sbjct: 310 AELMPLIVDERMDQDKVSMDDETRSLL 336
>gi|302804432|ref|XP_002983968.1| hypothetical protein SELMODRAFT_423071 [Selaginella moellendorffii]
gi|300148320|gb|EFJ14980.1| hypothetical protein SELMODRAFT_423071 [Selaginella moellendorffii]
Length = 598
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 113/429 (26%), Positives = 195/429 (45%), Gaps = 29/429 (6%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGID--------AAENYFVDLPETSKNHLT 125
L + + KR KT D+A +D V +D AE F LP+ K
Sbjct: 104 VLSIIRKLTKRQKYKTALDKAFEIDDRDYVLQVDYYAHVDMYLAEMAFNRLPDDKKTEEA 163
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y +L Y + M EKA +++K++EL L S+ + L+ G +IPA++ E +
Sbjct: 164 YNYILAGYVRNRMLEKAVVVMDKIRELGL-VSAFSLEQMTLLFHYLGLERRIPALVVEAR 222
Query: 186 ASSI--MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
+ + P ++W++ D+SG E ++EE++ GR A W T+ +AS Y++AG
Sbjct: 223 SLGLHFHPHFLNTHLWIKRRHG--DLSGMEEIVEELELMGRSNA-W-TYIFIASAYIQAG 278
Query: 244 LFEKAERALKE----LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
EKA AL + N + Y ++ LYG ++ + R+W L + P A
Sbjct: 279 FPEKAHAALGAAEAGIRNGRFKKQRKVYNKILLLYGLLKDMEGIERVWGILN-SRPLVAV 337
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGC--ATYDIRVTNVMIGAYAKEGRLENAEE-L 356
++L MI+ L + ++ AE+ F+E C + R VM GAY K G ++ A E L
Sbjct: 338 HNHLFMIEALGSAGNIGRAEEIFEELRK-CRGVRKEYRQFIVMAGAYTKNGLMDKATEVL 396
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGK-WVPSSETIRT 415
+ + A P + + F Y++ + A++ E+ R K W ET+
Sbjct: 397 YDYPAKYKARPVPELYHYFIKGYIKRNEKDWAIEAYEEGQSLVRYRSTKLWY---ETMLE 453
Query: 416 FMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVE 475
M + + DV A + KA + +F L +TY A + +++R+ M E
Sbjct: 454 VMSIYAERGDVTSALAMFKHC-KACKHRDIRMFTLLFKTYVVAKEPAHGLIKRMVMLGFE 512
Query: 476 VSEASKKLL 484
++ ++L+
Sbjct: 513 PNDEIRELI 521
>gi|449474117|ref|XP_004154078.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like, partial [Cucumis sativus]
Length = 263
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 111/212 (52%), Gaps = 3/212 (1%)
Query: 77 LSENMEKRG-MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCK 135
SE +E G + D A + L+AKVQG+ AE+Y +P++ + + + +LL Y
Sbjct: 52 FSEWLEANGQLEFNERDYASRVHLIAKVQGLHKAESYIAKIPKSFQGEVVHRALLANYVV 111
Query: 136 ELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYT 195
EKAE + K+K+L S +N ++ LY K KI ++ M+ +I P +T
Sbjct: 112 ANNVEKAEEVFNKIKDLEFPMSIFAYNQMLVLYKKIDR-RKIADVLLLMEKENIKPCPFT 170
Query: 196 YNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 255
Y + + NDISG E+V++ MK +G + D +T S LA YV GL KA+ LKE+
Sbjct: 171 YKILIDGKGLSNDISGMEQVVDSMKAEG-IELDVSTLSLLAKHYVSCGLKVKAKAILKEI 229
Query: 256 ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW 287
E N++ + L+ YG+ EV R+W
Sbjct: 230 EETNSNGPQWLCRILLPFYGKLQMEDEVRRLW 261
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 140/313 (44%), Gaps = 7/313 (2%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY SL+ K+ T KA L ++MK S+ F +LM K G + ++ E
Sbjct: 185 MTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDE 244
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
MK + P TYN + V D+ A +++EMKR+G D T+S L + ++A
Sbjct: 245 MKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNG-CKPDVVTYSCLITGLIKAS 303
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
++A + LK++E D Y LI G+ G L++ R++ ++ N ++Y
Sbjct: 304 QLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYS 363
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I L + A F+E ES D+ +I K G++++A+ L R +
Sbjct: 364 TLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGK 423
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQE 423
G P+ T+ F + R G K A E ++G +P T + +
Sbjct: 424 GLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESG------LLPDVATYDALLLGLSKT 477
Query: 424 KDVDGAEGFLEIL 436
K+VD A G L+ L
Sbjct: 478 KEVDDACGLLKEL 490
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 141/324 (43%), Gaps = 14/324 (4%)
Query: 155 GFSS---MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISG 211
GF S + +NSL+ AK G E+ + +E+KA+ PD +Y+ + +L
Sbjct: 3 GFPSPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEA 62
Query: 212 AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 271
A V+ EM+ G WT ++ L +AG F++A R L E+ + D+ Y LI
Sbjct: 63 ALEVVAEMQAKGCKPNLWT-YNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLI 121
Query: 272 TLYGQTGNLSEVYRIWRSLR--LAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGC 329
+ G+ G LSE + ++ +R P+T +Y ++I L + A + +E E
Sbjct: 122 STLGKAGRLSEAFTLFAEMRERGCVPDT--FTYNSLIYGLGKVGRSQKAMELLEEMERHG 179
Query: 330 ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 389
D+ + +I K+G A +L + +RRG P++ T+ D + G + A+
Sbjct: 180 CPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDAL 239
Query: 390 DCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFE 449
+ L++ + G P T + F + D+ A L+ +K+ V +
Sbjct: 240 ELLDEMKERG------VKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYS 293
Query: 450 PLIRTYAAAGRTSPVMLRRLKMEK 473
LI A + KMEK
Sbjct: 294 CLITGLIKASQLDEACQVLKKMEK 317
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/392 (21%), Positives = 169/392 (43%), Gaps = 11/392 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK--NHLTYGSLLN 131
A++L E ME+ G V + + + K A F ++ + + +T+ +L++
Sbjct: 168 AMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMD 227
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
K + A LL++MKE + + +N+L+ + K G + ++ EMK + P
Sbjct: 228 ALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKP 287
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D TY+ + L + + A +V+++M+++G D T++ L + +AGL A R
Sbjct: 288 DVVTYSCLITGLIKASQLDEACQVLKKMEKEG-CPPDTITYNTLINGLGKAGLLNDAGRL 346
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
++++ + D+ Y LIT G+ + ++ + +Y ++I VL
Sbjct: 347 FDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGK 406
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+ A++ F E + D+ N + + + GR + A ++ E + G P+ T
Sbjct: 407 AGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVAT 466
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAIDTGRG-DGGKWVPSSETIRTFMRHFEQEKDVDGAE 430
++ + ++ A L++ I+ G D K+ E + ++ +VD A
Sbjct: 467 YDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSW-------GNVDEAH 519
Query: 431 GFLEILKKAVDDLGVEVFEPLIRTYAAAGRTS 462
L+ G + LI A AGR S
Sbjct: 520 ELLQFANSKGLWPGASSYNALIDALAKAGRVS 551
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 121/276 (43%), Gaps = 3/276 (1%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S N +TY SLLN K E+A+ L E++K + ++ L+ + G E
Sbjct: 6 SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
++ EM+A P+ +TYN + L A R++ EM+ +G V D T++ L S
Sbjct: 66 VVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCV-PDVRTYNCLISTL 124
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL-RLAFPNTA 298
+AG +A E+ R D Y LI G+ G + + + R P
Sbjct: 125 GKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDV 184
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
++Y ++I L + A K F+E + D ++ A K GR+++A EL +
Sbjct: 185 -MTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLD 243
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
+ RG P T+ + + GD+ A + L++
Sbjct: 244 EMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDE 279
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/272 (18%), Positives = 111/272 (40%), Gaps = 36/272 (13%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
A +L + M+ +G N V + + + K +++A F ++ + TY S++
Sbjct: 343 AGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIIT 402
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
K + A+ L +M+ L + +N+ + + G ++ I ++MK S ++P
Sbjct: 403 VLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLP 462
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDG------------RVAADW---------- 229
D TY+ + L+ ++ A +++E+ G + W
Sbjct: 463 DVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELL 522
Query: 230 ------------TTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQT 277
++++ L +AG +A L++L+ + D+ +Y LI+ GQT
Sbjct: 523 QFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQT 582
Query: 278 GNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 309
G + + + + + SY N+++ L
Sbjct: 583 GQIDTAFELLEEMSKRGLKLSPRSYSNLVRKL 614
>gi|297849054|ref|XP_002892408.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338250|gb|EFH68667.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 536
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 172/392 (43%), Gaps = 3/392 (0%)
Query: 97 LDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGF 156
L+ K+ G+ E F +P+ +N L Y +L+ + + A ++KM+EL
Sbjct: 142 LEFTVKLHGVSQGEKLFTRVPQEFQNELLYNNLVIACLDQGVIRLALEYMKKMRELGYRT 201
Query: 157 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
S + +N L+ + G + I + MKA P TY++ M+ A ++I G +
Sbjct: 202 SHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEANEHNIDGVLKAF 261
Query: 217 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 276
+ MK+ G V + ++ LA + A L+ AE +E+E + S L+ LYG+
Sbjct: 262 DGMKKAG-VEPNEVSYCILAMAHAVARLYTVAEAYTEEIEKSVTGNNWSTLDILMILYGR 320
Query: 277 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 336
G E+ R W +R F + + SYL + + +L AE+ + E ++ +
Sbjct: 321 LGKEKELVRTWNVIR-GFHHVRSKSYLLATEAFAQVGNLDRAEELWLEMKNVRGLKETEQ 379
Query: 337 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 396
N ++ Y K+G +E A + G PN+ T+ + + MK A+ +E
Sbjct: 380 FNSLLSVYCKDGLIEKAIGVFREMMGDGFKPNSITYRHLALGCAKAKLMKEALKNIEMGS 439
Query: 397 DTGRGDGGK-WVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 455
+ + + P ET + + F ++ DV+ +E E +K A + V+ L + Y
Sbjct: 440 NLKTSNSIRSSTPWLETTLSIIECFAEKGDVENSEKLFEEVKNAKYNRYAFVYNALFKAY 499
Query: 456 AAAGRTSPVMLRRLKMEKVEVSEASKKLLEAI 487
A P + +R+ + S LL+ +
Sbjct: 500 VKAKVYDPNLFKRMVLGGARPDAESYSLLKLV 531
>gi|15226907|ref|NP_181058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100538|sp|O82178.1|PP186_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g35130
gi|3668091|gb|AAC61823.1| hypothetical protein [Arabidopsis thaliana]
gi|330253974|gb|AEC09068.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 591
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 132/326 (40%), Gaps = 48/326 (14%)
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
+ N TY +L+N + +E + EKAE + E+++E L +N+LM Y++ G+P
Sbjct: 294 QCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGA 353
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
I M+ PD +YN+ + A S AE V EEMKR G +A + L S
Sbjct: 354 AEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLG-IAPTMKSHMLLLS 412
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
Y +A K E +KE+ D ++ LYG+ G +++
Sbjct: 413 AYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKM-------------- 458
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
EK E E+G T DI N++I Y K G LE EEL
Sbjct: 459 ---------------------EKILAEMENGPCTADISTYNILINIYGKAGFLERIEELF 497
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL---EKAIDTGRGDGGKWVPSSETIR 414
+ + P+ TW Y R KL V CL E+ ID+G P T +
Sbjct: 498 VELKEKNFRPDVVTWTSRIGAYSRK---KLYVKCLEVFEEMIDSG------CAPDGGTAK 548
Query: 415 TFMRHFEQEKDVDGAEGFLEILKKAV 440
+ E+ V+ L + K V
Sbjct: 549 VLLSACSSEEQVEQVTSVLRTMHKGV 574
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 91/210 (43%), Gaps = 17/210 (8%)
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
++ SS PD +N+ + A AE + ++ + R T++ L Y AG
Sbjct: 146 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQL-LESRYVPTEDTYALLIKAYCMAG 204
Query: 244 LFEKAERALKELENRNAHR---DLSAYQ-FLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
L E+AE L E++N + ++ Y ++ L + GN E +++ ++
Sbjct: 205 LIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 264
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGC------ATYDIRVTNVMIGAYAKEGRLENA 353
+Y +++NL A K + W+ C +I ++ A+A+EG E A
Sbjct: 265 ETY----NLMINLYG--KASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKA 318
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNG 383
EE+ E+ + G +P+ + + Y R G
Sbjct: 319 EEIFEQLQEDGLEPDVYVYNALMESYSRAG 348
>gi|302753488|ref|XP_002960168.1| hypothetical protein SELMODRAFT_402234 [Selaginella moellendorffii]
gi|300171107|gb|EFJ37707.1| hypothetical protein SELMODRAFT_402234 [Selaginella moellendorffii]
Length = 585
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 113/429 (26%), Positives = 195/429 (45%), Gaps = 29/429 (6%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGID--------AAENYFVDLPETSKNHLT 125
L + + KR KT D+A +D V +D AE F LP+ K
Sbjct: 91 VLSIIRKLTKRQKYKTALDKAFEIDDRDYVLQVDYYAHVDMYLAEMAFNRLPDDKKTEEA 150
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y +L + + M EKA +++K++EL L S+ + L+ G +IPA++ E +
Sbjct: 151 YNYILAGFVRNRMLEKAVVVMDKIRELGL-VSAFSLEQMTLLFHYLGLERRIPALVVEAR 209
Query: 186 ASSI--MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
+ + P ++W++ D+SG E ++EE++ GR A W T+ +AS Y++AG
Sbjct: 210 SLGLHFHPHFLNTHLWIKRRHG--DLSGMEEIVEELELMGRSNA-W-TYIFIASAYIQAG 265
Query: 244 LFEKAERALKE----LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
L EKA AL + N + Y ++ LYG + + R+W L + P A
Sbjct: 266 LPEKAHAALGAAEAGIRNGRFKKQRKVYNKILLLYGLLKDTEGIERVWGILN-SRPLVAV 324
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGC--ATYDIRVTNVMIGAYAKEGRLENAEE-L 356
++L MI+ L + ++ AE+ F+E C + R VM GAY K G ++ A E L
Sbjct: 325 HNHLFMIEALGSAGNIGRAEEIFEELRK-CRGVRKEYRQFIVMAGAYTKNGLMDKATEVL 383
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGK-WVPSSETIRT 415
+ + A P + + F Y++ + A++ E+ R K W ET+
Sbjct: 384 YDYPAKYKARPVPELYHYFIKGYIKRNEKDWAIEAYEEGQSLVRYRSTKLWY---ETMLE 440
Query: 416 FMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVE 475
M + + DV A + KA + +F L +TY A + +++R+ M E
Sbjct: 441 VMSIYAERGDVTSALAMFKHC-KACKHRDIRMFTLLFKTYVVAKEPAHGLIKRMVMLGFE 499
Query: 476 VSEASKKLL 484
++ ++L+
Sbjct: 500 PNDEIRELI 508
>gi|218200516|gb|EEC82943.1| hypothetical protein OsI_27919 [Oryza sativa Indica Group]
Length = 500
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 137/286 (47%), Gaps = 4/286 (1%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKEL-MT 139
M +R + D + L+ AKV GI AE+ F+ +P+ +N L Y +L+ C +L +
Sbjct: 108 MRERPYKLSELDYSYLLEFTAKVHGISEAESLFLRIPQEYQNELLYNNLVMA-CLDLGLI 166
Query: 140 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 199
+ A KM+EL+L S +N L+ L++ G + I I+ +MK + P + TYN+
Sbjct: 167 KLAYGYKRKMRELSLPISPYVYNRLIILHSSPGRQKTISKILAQMKGDRVTPHTSTYNIL 226
Query: 200 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 259
++ A ++I G RV +MKR +V + T+ LA + A L+ + ++ +EN
Sbjct: 227 LKIKANEHNIDGVARVFNDMKR-AKVEPNEITYGILAIAHAVARLYTVSHTYVEAIENSM 285
Query: 260 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 319
+ S + L+ LYG G E+ W L P+ S++ I+ + + AE
Sbjct: 286 TGTNWSTLEILLILYGYHGKAKELKMTW-DLMQGLPHIRPKSFILAIEAFGKVGSIDQAE 344
Query: 320 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
+ + ++ES N ++ Y + G ++ A + + R G
Sbjct: 345 EIWGKFESTRKPKLTEQFNSILSVYCRHGLVDKASAVFKEMRANGC 390
>gi|334184699|ref|NP_001189682.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330253975|gb|AEC09069.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 613
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 132/326 (40%), Gaps = 48/326 (14%)
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
+ N TY +L+N + +E + EKAE + E+++E L +N+LM Y++ G+P
Sbjct: 316 QCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGA 375
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
I M+ PD +YN+ + A S AE V EEMKR G +A + L S
Sbjct: 376 AEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLG-IAPTMKSHMLLLS 434
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
Y +A K E +KE+ D ++ LYG+ G +++
Sbjct: 435 AYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKM-------------- 480
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
EK E E+G T DI N++I Y K G LE EEL
Sbjct: 481 ---------------------EKILAEMENGPCTADISTYNILINIYGKAGFLERIEELF 519
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL---EKAIDTGRGDGGKWVPSSETIR 414
+ + P+ TW Y R KL V CL E+ ID+G P T +
Sbjct: 520 VELKEKNFRPDVVTWTSRIGAYSRK---KLYVKCLEVFEEMIDSG------CAPDGGTAK 570
Query: 415 TFMRHFEQEKDVDGAEGFLEILKKAV 440
+ E+ V+ L + K V
Sbjct: 571 VLLSACSSEEQVEQVTSVLRTMHKGV 596
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 91/210 (43%), Gaps = 17/210 (8%)
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
++ SS PD +N+ + A AE + ++ + R T++ L Y AG
Sbjct: 168 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQL-LESRYVPTEDTYALLIKAYCMAG 226
Query: 244 LFEKAERALKELENRNAHR---DLSAYQ-FLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
L E+AE L E++N + ++ Y ++ L + GN E +++ ++
Sbjct: 227 LIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 286
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGC------ATYDIRVTNVMIGAYAKEGRLENA 353
+Y +++NL A K + W+ C +I ++ A+A+EG E A
Sbjct: 287 ETY----NLMINLYG--KASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKA 340
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNG 383
EE+ E+ + G +P+ + + Y R G
Sbjct: 341 EEIFEQLQEDGLEPDVYVYNALMESYSRAG 370
>gi|413947980|gb|AFW80629.1| hypothetical protein ZEAMMB73_384852 [Zea mays]
Length = 184
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 103/183 (56%), Gaps = 4/183 (2%)
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
M+ L L D+ ++ + EWES T+D+++TN+MI ++ K G E AE L E+ + G
Sbjct: 1 MLHALYKLNDIDRMKQIYMEWESNYETFDVKLTNMMIRSHLKVGMTEEAEMLVEKVKENG 60
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 424
A+ + KT E+F D+Y+ DM A++ LE + + I F ++FE+ K
Sbjct: 61 AEFDTKTCELFLDHYMGTEDMNSALNWLENMTKLSKKAEK---LDQDRIYKFQKYFEEHK 117
Query: 425 DVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 484
D DGAE F L + + + + +E L+RTY AAG+ S + +++K +KVE+ KLL
Sbjct: 118 DADGAERFCNCL-RTLGCIDGKAYESLLRTYLAAGKKSCSLRQQIKNDKVEICYDIGKLL 176
Query: 485 EAI 487
+ +
Sbjct: 177 KRL 179
>gi|15229739|ref|NP_187745.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|12322901|gb|AAG51439.1|AC008153_12 hypothetical protein; 6614-8314 [Arabidopsis thaliana]
gi|332641514|gb|AEE75035.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 541
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 148/299 (49%), Gaps = 36/299 (12%)
Query: 62 LKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK 121
++KLR AL++S+ M ++ M D + L KV ++ AE +F +PE +
Sbjct: 82 VEKLRSSNRPRQALEVSDWMVEQKMYNLPEDFSARFHLTEKVLNLEEAEKFFESIPENMR 141
Query: 122 NHLTYGSLLNCYCK---ELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
Y SLL Y + E +KAE++ +KMK+L L P+NS+ +LY+ G+ +K+
Sbjct: 142 FESMYNSLLRSYARQSGEKALKKAESVFKKMKKLGLLLRPSPYNSMTSLYSSLGNRDKVD 201
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
I++EMK +++ D+ T N +R AAV+D++ ++ + + K R+ D T +A
Sbjct: 202 EILREMKENNVELDNVTVNNALRVYAAVSDVATMDKFLADRKEITRL--DGLTMLAMAKA 259
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
Y L++LYG+ G + +V+R+W + A
Sbjct: 260 YE-----------------------------LMSLYGEAGEIEDVHRVWDKYK-ATRQKD 289
Query: 299 NISYLNMIQVLVNLKDLPGAEKC-FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
N + +I L+ L D GAEK + EWE +D R+ ++++ Y ++G + A++L
Sbjct: 290 NEEFRTLIGSLLKLGDTKGAEKIYYNEWECSGLEFDNRIPDMLVSGYREKGMVMKADKL 348
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 89/159 (55%), Gaps = 3/159 (1%)
Query: 60 DTLKKLRDRKLYYPALKLSENM-EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF-VDLP 117
D +K LRD AL+ S M +K+ N D A L L KV G++ AEN+F +P
Sbjct: 383 DLIKNLRDSNQLSKALEASTWMCQKKVFNLFSEDYATRLHLTEKVLGLEEAENFFESSIP 442
Query: 118 ETSKNHLTYGSLLNCYCKELMTE-KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK 176
E K++ Y +LL+CY + T+ KAEA+ EKM+EL L PFNSL++LY+ G
Sbjct: 443 ENMKDYSVYDTLLSCYARSSNTQSKAEAVFEKMRELGLQSKLSPFNSLISLYSGQGKLSV 502
Query: 177 IPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERV 215
+ ++ +MK +I PD T N +RA A + I E+V
Sbjct: 503 VNILLCDMKHKNIEPDIVTRNNVLRANAYILAIDSMEKV 541
>gi|302811145|ref|XP_002987262.1| hypothetical protein SELMODRAFT_426086 [Selaginella moellendorffii]
gi|300144897|gb|EFJ11577.1| hypothetical protein SELMODRAFT_426086 [Selaginella moellendorffii]
Length = 564
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 180/403 (44%), Gaps = 25/403 (6%)
Query: 97 LDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGF 156
LDL ++ + F LP+ ++ Y LL Y K M E AE +++++ +G
Sbjct: 74 LDLCSRCHHVTRTLLLFRRLPKQWRSEDAYCILLELYYKRDMLEDAEKTMQELR--GIGI 131
Query: 157 SSM-PFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVN-DISGAER 214
S+ P++ +++ Y G + ++ E+K S + D Y + + A + D+ E
Sbjct: 132 KSLQPYHLMLSFYKLRGMEMRFERMVTEIKGSGLALDRSFYTILLAARDSFGGDMVAVED 191
Query: 215 VIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL----SAYQFL 270
V+ EM+ G + D +A IY+ +GL K+ER L+ LE + S + +
Sbjct: 192 VLAEMEGRG-LKLDAVGCLAVAGIYLRSGLRHKSERVLQRLEKSLKSGEFKDSNSIRRRM 250
Query: 271 ITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCA 330
+ ++G+ G+ V RIW S+ + T ++ I+ + + AE + GC
Sbjct: 251 LAMFGKLGDRDAVDRIWHSIERSASTTVE-DFIFGIEAFGRVGKMDEAEDMYMR--VGCN 307
Query: 331 TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
+ + R+ N + ++G + A L ER + + T+ + YL+ GD+ A
Sbjct: 308 SCNPRLHNAFLAVLVEQGDVIRAVALVERMKGVRCLLSTVTYHLLIKVYLKAGDVSRAT- 366
Query: 391 CLEKAIDTGRGDGGK--WV-PSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDD---LG 444
A ++ R GK W PSSET+ + F DV +E ++KK ++D L
Sbjct: 367 ---LAFESLRSAFGKLEWPRPSSETLAVMLEFFVGIGDVQASE---RLVKKWMEDGFPLS 420
Query: 445 VEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAI 487
VF L R YA G R+ VE + +++LL I
Sbjct: 421 AAVFHSLFRVYAKGGAGVDNFPGRMLSAGVEPTRETEQLLRQI 463
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 76/166 (45%), Gaps = 6/166 (3%)
Query: 83 KRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKA 142
+R + TV D ++ +V +D AE+ ++ + S N + + L ++ +A
Sbjct: 271 ERSASTTVEDFIFGIEAFGRVGKMDEAEDMYMRVGCNSCNPRLHNAFLAVLVEQGDVIRA 330
Query: 143 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS-----IMPDSYTYN 197
AL+E+MK + S++ ++ L+ +Y K G + + ++++ P S T
Sbjct: 331 VALVERMKGVRCLLSTVTYHLLIKVYLKAGDVSRATLAFESLRSAFGKLEWPRPSSETLA 390
Query: 198 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
V + + D+ +ER++++ DG F +L +Y + G
Sbjct: 391 VMLEFFVGIGDVQASERLVKKWMEDG-FPLSAAVFHSLFRVYAKGG 435
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 144/315 (45%), Gaps = 3/315 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
A ++ + + + G+ V I ++ + K Q I+ +++ D+ E + +TY +L+N
Sbjct: 342 AWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLIN 401
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
YC++ + E+A L++ M L +N+++ KTG + ++ EM + P
Sbjct: 402 AYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSP 461
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D+ TYN+ + +++ AER+ +EM G V D +FS L + + G ++A +
Sbjct: 462 DTATYNILLVECCRNDNMMDAERIFDEMPSQG-VVPDLVSFSALIGLLSKNGCLDQALKY 520
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
++++N D Y LI + + G +SE ++ + ++Y ++ L
Sbjct: 521 FRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCK 580
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
K L A++ F E D +I Y K+G + A L E +R P+ T
Sbjct: 581 EKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVT 640
Query: 372 WEIFSDYYLRNGDMK 386
+ D + + +M+
Sbjct: 641 YNTLIDGFCKGSEME 655
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 116/265 (43%), Gaps = 1/265 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY ++LN CKE M +A+ L +M E + F +L+ Y K G+ K + +
Sbjct: 569 VTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEM 628
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M ++ PD TYN + +++ + +M R+ + ++ L + Y G
Sbjct: 629 MIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISR-RIYPNHISYGILINGYCNMG 687
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
+A R E+ + + ++ Y + GN + ++ L I+Y
Sbjct: 688 CVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYN 747
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I + +++ A + E+ D+ NV++ ++++GR++ AE + + R
Sbjct: 748 TLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIER 807
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLA 388
G +P+ T+ + ++ ++K A
Sbjct: 808 GVNPDRSTYTSLINGHVTQNNLKEA 832
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 131/316 (41%), Gaps = 17/316 (5%)
Query: 93 QAIHLDLVAK--VQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMK 150
QA+ L +V K V ++ E+ + N L + L+ Y + + +K
Sbjct: 256 QAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLK 315
Query: 151 ELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDIS 210
L S NSL+ K G + I QE+ S + + YT N+ + AL I
Sbjct: 316 SKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIE 375
Query: 211 GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 270
+ + +M+ G V D T++ L + Y GL E+A + + + + Y +
Sbjct: 376 NTKSFLSDMEEKG-VFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAI 434
Query: 271 ITLYGQTGN-------LSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 323
I +TG L E+ +I S P+TA + L +++ N ++ AE+ F
Sbjct: 435 INGLCKTGKYLRAKGVLDEMLKIGMS-----PDTATYNIL-LVECCRN-DNMMDAERIFD 487
Query: 324 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
E S D+ + +IG +K G L+ A + + G P+ + I + RNG
Sbjct: 488 EMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNG 547
Query: 384 DMKLAVDCLEKAIDTG 399
M A+ ++ ++ G
Sbjct: 548 VMSEALKVRDEMLEQG 563
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 95/215 (44%), Gaps = 3/215 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A+ L E M +R + V +D K ++ + D+ NH++YG L+N
Sbjct: 622 AVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILIN 681
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
YC +A L ++M E + + N+++ Y + G+ K + M I+P
Sbjct: 682 GYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVP 741
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D TYN + ++ A ++ +M+ G + D T++ + + + G ++AE
Sbjct: 742 DGITYNTLINGFIKEENMDRAFALVNKMENSG-LLPDVITYNVILNGFSRQGRMQEAELI 800
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
+ ++ R + D S Y LI + NL E +R+
Sbjct: 801 MLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRV 835
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 54/105 (51%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +L+N + KE ++A AL+ KM+ L + +N ++ +++ G ++ I+ +
Sbjct: 744 ITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLK 803
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAAD 228
M + PD TY + N++ A RV +EM + G V D
Sbjct: 804 MIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDD 848
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 145/315 (46%), Gaps = 3/315 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
A ++ + + + G+ V I ++ + K Q I+ +++ D+ E + +TY +L+N
Sbjct: 81 AWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLIN 140
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
YC++ + E+A L++ M L +N+++ KTG + ++ EM + P
Sbjct: 141 AYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSP 200
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D+ TYN+ + +++ AER+ +EM G V D +FS L + + G ++A +
Sbjct: 201 DTATYNILLVECCRNDNMMDAERIFDEMPSQG-VVPDLVSFSALIGLLSKNGCLDQALKY 259
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
++++N D Y LI + + G +SE ++ + ++Y ++ L
Sbjct: 260 FRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCK 319
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
K L A++ F E D +I Y+K+G + A L E +R P+ T
Sbjct: 320 EKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVT 379
Query: 372 WEIFSDYYLRNGDMK 386
+ D + + +M+
Sbjct: 380 YNTLIDGFCKGSEME 394
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 117/265 (44%), Gaps = 1/265 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY ++LN CKE M +A+ L +M E + F +L+ Y+K G+ K + +
Sbjct: 308 VTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEM 367
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M ++ PD TYN + +++ + +M R+ + ++ L + Y G
Sbjct: 368 MIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISR-RIYPNHISYGILINGYCNMG 426
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
+A R E+ + + ++ Y + GN + ++ L I+Y
Sbjct: 427 CVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYN 486
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I + +++ A + E+ D+ NV++ ++++GR++ AE + + R
Sbjct: 487 TLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIER 546
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLA 388
G +P+ T+ + ++ ++K A
Sbjct: 547 GVNPDRSTYTSLINGHVTQNNLKEA 571
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 147/367 (40%), Gaps = 23/367 (6%)
Query: 101 AKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMP 160
+ V ++ E+ + N L + L+ Y + + +K L S
Sbjct: 5 SGVSRVEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINA 64
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
NSL+ K G + I QE+ S + + YT N+ + AL I + + +M+
Sbjct: 65 CNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDME 124
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGN- 279
G V D T++ L + Y GL E+A + + + + Y +I +TG
Sbjct: 125 EKG-VFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKY 183
Query: 280 ------LSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYD 333
L E+ +I S P+TA + L +++ N ++ AE+ F E S D
Sbjct: 184 LRAKGVLDEMLKIGMS-----PDTATYNIL-LVECCRN-DNMMDAERIFDEMPSQGVVPD 236
Query: 334 IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
+ + +IG +K G L+ A + + G P+ + I + RNG M A+ +
Sbjct: 237 LVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRD 296
Query: 394 KAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA-EGFLEILKKAVDDLGVEVFEPLI 452
+ ++ G V T T + +EK + A E F E+ ++ V F LI
Sbjct: 297 EMLEQG------CVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFP-DFYTFTTLI 349
Query: 453 RTYAAAG 459
Y+ G
Sbjct: 350 NGYSKDG 356
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 78/165 (47%), Gaps = 1/165 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
NH++YG L+N YC +A L ++M E + + N+++ Y + G+ K +
Sbjct: 411 NHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFL 470
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M I+PD TYN + ++ A ++ +M+ G + D T++ + + +
Sbjct: 471 SNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSG-LLPDVITYNVILNGFSR 529
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
G ++AE + ++ R + D S Y LI + NL E +R+
Sbjct: 530 QGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRV 574
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 54/105 (51%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +L+N + KE ++A AL+ KM+ L + +N ++ +++ G ++ I+ +
Sbjct: 483 ITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLK 542
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAAD 228
M + PD TY + N++ A RV +EM + G V D
Sbjct: 543 MIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDD 587
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 145/315 (46%), Gaps = 3/315 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
A ++ + + + G+ V I ++ + K Q I+ +++ D+ E + +TY +L+N
Sbjct: 238 AWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLIN 297
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
YC++ + E+A L++ M L +N+++ KTG + ++ EM + P
Sbjct: 298 AYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSP 357
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D+ TYN+ + +++ AER+ +EM G V D +FS L + + G ++A +
Sbjct: 358 DTATYNILLVECCRNDNMMDAERIFDEMPSQG-VVPDLVSFSALIGLLSKNGCLDQALKY 416
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
++++N D Y LI + + G +SE ++ + ++Y ++ L
Sbjct: 417 FRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCK 476
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
K L A++ F E D +I Y+K+G + A L E +R P+ T
Sbjct: 477 EKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVT 536
Query: 372 WEIFSDYYLRNGDMK 386
+ D + + +M+
Sbjct: 537 YNTLIDGFCKGSEME 551
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 117/265 (44%), Gaps = 1/265 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY ++LN CKE M +A+ L +M E + F +L+ Y+K G+ K + +
Sbjct: 465 VTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEM 524
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M ++ PD TYN + +++ + +M R+ + ++ L + Y G
Sbjct: 525 MIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISR-RIYPNHISYGILINGYCNMG 583
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
+A R E+ + + ++ Y + GN + ++ L I+Y
Sbjct: 584 CVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYN 643
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I + +++ A + E+ D+ NV++ ++++GR++ AE + + R
Sbjct: 644 TLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIER 703
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLA 388
G +P+ T+ + ++ ++K A
Sbjct: 704 GVNPDRSTYTSLINGHVTQNNLKEA 728
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 153/377 (40%), Gaps = 25/377 (6%)
Query: 93 QAIHLDLVAK--VQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMK 150
QA+ L +V K V ++ E+ + N L + L+ Y + + +K
Sbjct: 152 QAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLK 211
Query: 151 ELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDIS 210
L S NSL+ K G + I QE+ S + + YT N+ + AL I
Sbjct: 212 SKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIE 271
Query: 211 GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 270
+ + +M+ G V D T++ L + Y GL E+A + + + + Y +
Sbjct: 272 NTKSFLSDMEEKG-VFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAI 330
Query: 271 ITLYGQTGN-------LSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 323
I +TG L E+ +I S P+TA + L +++ N ++ AE+ F
Sbjct: 331 INGLCKTGKYLRAKGVLDEMLKIGMS-----PDTATYNIL-LVECCRN-DNMMDAERIFD 383
Query: 324 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
E S D+ + +IG +K G L+ A + + G P+ + I + RNG
Sbjct: 384 EMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNG 443
Query: 384 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA-EGFLEILKKAVDD 442
M A+ ++ ++ G V T T + +EK + A E F E+ ++ V
Sbjct: 444 VMSEALKVRDEMLEQG------CVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFP 497
Query: 443 LGVEVFEPLIRTYAAAG 459
F LI Y+ G
Sbjct: 498 -DFYTFTTLINGYSKDG 513
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 78/165 (47%), Gaps = 1/165 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
NH++YG L+N YC +A L ++M E + + N+++ Y + G+ K +
Sbjct: 568 NHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFL 627
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M I+PD TYN + ++ A ++ +M+ G + D T++ + + +
Sbjct: 628 SNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSG-LLPDVITYNVILNGFSR 686
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
G ++AE + ++ R + D S Y LI + NL E +R+
Sbjct: 687 QGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRV 731
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 54/105 (51%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +L+N + KE ++A AL+ KM+ L + +N ++ +++ G ++ I+ +
Sbjct: 640 ITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLK 699
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAAD 228
M + PD TY + N++ A RV +EM + G V D
Sbjct: 700 MIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDD 744
>gi|168004269|ref|XP_001754834.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693938|gb|EDQ80288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 504
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 145/352 (41%), Gaps = 47/352 (13%)
Query: 80 NMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLNCYCKEL 137
+M+K+G+ V+ I +++ K D A++ F + + N TY +L+N + +E
Sbjct: 187 DMQKQGILPAVNTFTIMINIYGKAYYSDKADDLFRSMRKALCPPNLYTYTALMNAHAREG 246
Query: 138 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 197
+AE + +++ + +N+L+ Y++ HP + Q M + + PD +YN
Sbjct: 247 NCVRAEEIFAELQSVGFIPDVYTYNALLEAYSRGEHPTGAKEVFQAMVEAGVRPDQVSYN 306
Query: 198 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 257
+ + A + A+ V + MK G + L S Y +AG +AER ++E+EN
Sbjct: 307 ILIDAFGRAGLTADAQAVYDSMKEAG-FKPTMKSHMLLLSSYAKAGKVTEAERLVREIEN 365
Query: 258 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 317
D + L++ YG +G + E+
Sbjct: 366 SGVKPDTFMFNSLLSAYGNSGRIDEM---------------------------------- 391
Query: 318 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 377
E + S A DI N +I AYA+ G +E AEE+ +G P+ +W
Sbjct: 392 -ESLLESMVSSVAKPDISTLNTLINAYAQGGYIEKAEEVFNSLESKGLTPDVMSWTSLMG 450
Query: 378 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM---RHFEQEKDV 426
Y + + V +K + G +P T + F+ R EQ K+V
Sbjct: 451 AYAQRKLFRKCVSIFQKMVKAG------CIPDRATAKVFLSSCRSPEQVKEV 496
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 136/343 (39%), Gaps = 16/343 (4%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
+ L++ Y K +AE MK+ + FN L+ Y++ EK + EMK
Sbjct: 86 FNMLIDAYGKSKQWREAEKTFHLMKDFQCLPTETSFNVLLAAYSRGVQLEKAEKLFHEMK 145
Query: 186 ASSIMPDSY---------TYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLA 236
S+ P + TYN ++ L +S AE +M++ G + A TF+ +
Sbjct: 146 ESNYSPGTVEWMIFSGIATYNTYLEVLGKSGRLSQAEDTFRDMQKQGILPA-VNTFTIMI 204
Query: 237 SIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPN 296
+IY +A +KA+ + + +L Y L+ + + GN I+ L+
Sbjct: 205 NIYGKAYYSDKADDLFRSMRKALCPPNLYTYTALMNAHAREGNCVRAEEIFAELQSVGFI 264
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
+Y +++ + GA++ F+ D N++I A+ + G +A+ +
Sbjct: 265 PDVYTYNALLEAYSRGEHPTGAKEVFQAMVEAGVRPDQVSYNILIDAFGRAGLTADAQAV 324
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTF 416
+ + G P K+ + Y + G + A E+ + G K P + +
Sbjct: 325 YDSMKEAGFKPTMKSHMLLLSSYAKAGKVTEA----ERLVREIENSGVK--PDTFMFNSL 378
Query: 417 MRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
+ + +D E LE + +V + LI YA G
Sbjct: 379 LSAYGNSGRIDEMESLLESMVSSVAKPDISTLNTLINAYAQGG 421
Score = 38.5 bits (88), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 43/93 (46%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
T +L+N Y + EKAE + ++ L M + SLM YA+ K +I Q+M
Sbjct: 409 TLNTLINAYAQGGYIEKAEEVFNSLESKGLTPDVMSWTSLMGAYAQRKLFRKCVSIFQKM 468
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIE 217
+ +PD T V++ + + + +IE
Sbjct: 469 VKAGCIPDRATAKVFLSSCRSPEQVKEVTDMIE 501
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 157/353 (44%), Gaps = 15/353 (4%)
Query: 107 DAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMT 166
DA +++ D + + +TYG++++ YC E A LL++M L ++ + S++
Sbjct: 273 DACQHF--DEMSSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIA 330
Query: 167 LYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA 226
L G ++++M + D+ + + + D++ A R+ EEM++ G +A
Sbjct: 331 LLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRG-LA 389
Query: 227 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
AD T + L + AG ++A+R L+E+ ++ D+ Y LI Y + GN+ E +R+
Sbjct: 390 ADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRV 449
Query: 287 WRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAY 344
+ R PN ++Y + L D+ A + E + ++ N +I
Sbjct: 450 HNEMVGRRVAPNV--VTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGL 507
Query: 345 AKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGG 404
K G LE A + G + T+ D ++G+ A + L++ +D G
Sbjct: 508 CKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKG----- 562
Query: 405 KWVPSSETIRTFMRHFEQEKDVDGAEGFLE-ILKKAVDDLGVEVFEPLIRTYA 456
PS T M F V+G + LE +L+K V V + L++ Y
Sbjct: 563 -IKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRP-NVVTYNSLMKQYC 613
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 131/316 (41%), Gaps = 5/316 (1%)
Query: 74 ALKLSENMEKRGM--NKTVSDQAIHLDLVAKVQGIDAAENY-FVDLPETSKNHLTYGSLL 130
A+KL + M +G+ N TV I L L K Q DA + + + + + + +++
Sbjct: 306 AVKLLDEMAAKGLESNATVYTSVIAL-LCNKGQVSDALRVLEDMTMHGVALDAVVFTTVI 364
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
+ +C + A L E+M++ L + +L+ + G ++ ++QEM +
Sbjct: 365 SGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLD 424
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
D TY V + ++ A RV EM RVA + T++ L+ + G A
Sbjct: 425 VDVVTYTVLIDGYCKRGNMVEAFRVHNEMV-GRRVAPNVVTYTALSDGLCKQGDVRAANE 483
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
L E+ N+ ++ Y LI + GNL + RI + A T +Y +I L
Sbjct: 484 LLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLC 543
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
+ A +E I NV++ + GR+E ++L E + PN
Sbjct: 544 KSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVV 603
Query: 371 TWEIFSDYYLRNGDMK 386
T+ Y + +MK
Sbjct: 604 TYNSLMKQYCIDKNMK 619
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/313 (19%), Positives = 116/313 (37%), Gaps = 18/313 (5%)
Query: 168 YAKTGHPEKIPAIIQEMKASSI------MPDS--YTYNVWMRALAAVNDISGAERVIEEM 219
Y + PE A++ + +PD ++N+ ++AL + + A + +EM
Sbjct: 222 YGLSPSPESCNAVLSRLPLDEAIALFRELPDKNVCSHNILLKALLSAGRLKDACQHFDEM 281
Query: 220 KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGN 279
D T+ + Y G E A + L E+ + + + Y +I L G
Sbjct: 282 SS----PPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQ 337
Query: 280 LSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
+S+ R+ + + + + +I + DL A + F+E + D
Sbjct: 338 VSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTA 397
Query: 340 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+I + G L+ A+ + + +G D + T+ + D Y + G+M A + +
Sbjct: 398 LINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMV--- 454
Query: 400 RGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
G + P+ T ++ DV A L + +L V + LI G
Sbjct: 455 ---GRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFG 511
Query: 460 RTSPVMLRRLKME 472
M +ME
Sbjct: 512 NLEQAMRIMTEME 524
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 90/220 (40%), Gaps = 5/220 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A+++ ME G V +D + K D A N ++ + + TY L+N
Sbjct: 516 AMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMN 575
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C E + LLE M E N+ + + +NSLM Y + + I + M + + P
Sbjct: 576 GFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAP 635
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDG-RVAADWTTFSNLASIYVEAGLFEKAER 250
+ TYN+ ++ ++ A +EM G R+ A +++S L + + F +A
Sbjct: 636 NENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTA--SSYSALIRLLNKKKKFSEARV 693
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
++ N + Y F + + NL + L
Sbjct: 694 FFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTITLCDEL 733
>gi|225457536|ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial [Vitis vinifera]
gi|297745544|emb|CBI40709.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 127/256 (49%), Gaps = 3/256 (1%)
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
TE+AEA+ E++KE L + +N+L+ Y KTG + +I+ EM+ S PD +TY++
Sbjct: 307 TEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSL 366
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
+ A A A V++EM+ G V + FS + + Y + G ++K+ + L+E+ N
Sbjct: 367 LIDAYANAGRWESARIVLKEMEASG-VRPNSYVFSRILASYRDRGKWQKSFQVLREMRNS 425
Query: 259 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 318
D Y +I +G+ L + +R+ +++ +I A
Sbjct: 426 GVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKA 485
Query: 319 EKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 377
E+ F+ ESGC+ N+MI ++ ++ R E+ + L + + +G N T+ D
Sbjct: 486 EELFEAMQESGCSPCTT-TYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVD 544
Query: 378 YYLRNGDMKLAVDCLE 393
Y ++G K A++CLE
Sbjct: 545 IYGQSGRFKDAIECLE 560
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 130/338 (38%), Gaps = 46/338 (13%)
Query: 127 GSLLN----CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQ 182
G LLN + K +A + L ++ L + +++T G E+ AI +
Sbjct: 256 GQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFE 315
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
E+K +MP + YN ++ + AE ++ EM+R G + D T+S L Y A
Sbjct: 316 ELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSG-FSPDEHTYSLLIDAYANA 374
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY 302
G +E A LKE+E + + ++ Y G + +++ R +R
Sbjct: 375 GRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMR----------- 423
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
SG + D NVMI + K L++A +R R
Sbjct: 424 -----------------------NSGVSP-DRHFYNVMIDTFGKCNCLDHALATFDRMRM 459
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ 422
G P+A TW D + ++G A + E ++G P + T + F +
Sbjct: 460 EGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESG------CSPCTTTYNIMINSFGE 513
Query: 423 EKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 460
++ + + L ++ V + L+ Y +GR
Sbjct: 514 QERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGR 551
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 105/249 (42%), Gaps = 1/249 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY L++ Y E A +L++M+ + +S F+ ++ Y G +K
Sbjct: 358 SPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQ 417
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+++EM+ S + PD + YNV + N + A + M+ +G V D T++ L +
Sbjct: 418 VLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEG-VQPDAVTWNTLIDCH 476
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
++G KAE + ++ + Y +I +G+ +V + ++
Sbjct: 477 CKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANV 536
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
++Y ++ + A +C + +S + N +I AYA+ G E A
Sbjct: 537 VTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAFRV 596
Query: 360 ARRRGADPN 368
R G P+
Sbjct: 597 MRADGLKPS 605
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 108/261 (41%), Gaps = 8/261 (3%)
Query: 126 YGSLLNCYCKELMT-EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
+ SLL C + + A +L+ ++ NL FS S+ L G EK+
Sbjct: 120 WHSLLKSLCSDSSSIGTAYSLVTWLERHNLCFSYELLYSI--LIHALGRSEKLYEAFLLS 177
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ ++ P TYN + A A +D+ A ++ M+RDG +D+ +S +
Sbjct: 178 QRQTLTP--LTYNALIGACARNDDLEKALNLMSRMRRDG-FPSDFVNYSFIIQSLTRTNK 234
Query: 245 FEKA--ERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY 302
+ + ++ E+E+ D +I + ++G+++ ++ + +
Sbjct: 235 SDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATL 294
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+ +I L N AE F+E + G R N ++ Y K G L++AE + R
Sbjct: 295 VAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMER 354
Query: 363 RGADPNAKTWEIFSDYYLRNG 383
G P+ T+ + D Y G
Sbjct: 355 SGFSPDEHTYSLLIDAYANAG 375
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y +L+N Y + ++E+A M+ L S + NSL+ + + + +++Q MK
Sbjct: 574 YNALINAYAQRGLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMK 633
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
+ + PD TY M+AL V V EEM G
Sbjct: 634 ENDLKPDVVTYTTLMKALIRVEKFDKVPAVYEEMTLSG 671
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY +L++ Y + + A LE MK + L SS +N+L+ YA+ G E+
Sbjct: 535 NVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAF 594
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+ M+A + P N + A + A V++ MK + + D T++ L +
Sbjct: 595 RVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKEND-LKPDVVTYTTLMKALIR 653
Query: 242 AGLFEKAERALKEL 255
F+K +E+
Sbjct: 654 VEKFDKVPAVYEEM 667
>gi|255562320|ref|XP_002522167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538605|gb|EEF40208.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 342
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 142/326 (43%), Gaps = 10/326 (3%)
Query: 149 MKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVND 208
MK+L ++ N L+ LY + +KI ++ M+ +I P +TY + + ND
Sbjct: 1 MKDLEFPVTTFACNQLLLLYKRLD-KKKIADVLLLMEKENIKPSLFTYKLLIDTKGQSND 59
Query: 209 ISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQ 268
++G ++++E MK DG + D + LA Y GL EKAE LKE+E N A +
Sbjct: 60 LTGMDQIVETMKADG-IEPDINIRAILAKHYASGGLKEKAEAILKEMEGGNLEEHRWACR 118
Query: 269 FLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESG 328
L+ LY G EV R+W+ + P + +I+ LK + AE+ F +
Sbjct: 119 LLLPLYAALGKADEVERVWKVCE-SSPQLEEC--VAVIEAWGKLKKIDKAEEVFNRMLTT 175
Query: 329 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 388
R + ++ YA L N ++L ++ G TW+ Y+ G+++ A
Sbjct: 176 WKKLSSRHYSALLKVYASHKMLANGKDLIKKMADSGCRIGPLTWDSLVKLYVEAGEVEKA 235
Query: 389 VDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVF 448
L KA P + M + + DV AE +++A + F
Sbjct: 236 DSVLHKAAQQNHMK-----PMFSSYIVIMDQYAKRGDVHNAEKMFHRMRQAGYVARLRQF 290
Query: 449 EPLIRTYAAAGRTSPVMLRRLKMEKV 474
+ L++TY A + + R+K + +
Sbjct: 291 QALVQTYINAKAPAYGIRERMKADNI 316
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 80/181 (44%), Gaps = 4/181 (2%)
Query: 101 AKVQGIDAAENYFVDLPETSK--NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSS 158
K++ ID AE F + T K + Y +LL Y M + L++KM +
Sbjct: 157 GKLKKIDKAEEVFNRMLTTWKKLSSRHYSALLKVYASHKMLANGKDLIKKMADSGCRIGP 216
Query: 159 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM-PDSYTYNVWMRALAAVNDISGAERVIE 217
+ ++SL+ LY + G EK +++ + + M P +Y V M A D+ AE++
Sbjct: 217 LTWDSLVKLYVEAGEVEKADSVLHKAAQQNHMKPMFSSYIVIMDQYAKRGDVHNAEKMFH 276
Query: 218 EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQT 277
M++ G V A F L Y+ A R + +N ++ L+A L+ + +T
Sbjct: 277 RMRQAGYV-ARLRQFQALVQTYINAKAPAYGIRERMKADNIFPNKALAAQLALVDAFRKT 335
Query: 278 G 278
Sbjct: 336 A 336
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 128/307 (41%), Gaps = 56/307 (18%)
Query: 44 NQFLKSKKRVFKWEVGDTLKKLRDRKLYYPAL---KLSENMEKRGMNKTVSDQAIHLDLV 100
NQ L KR+ K ++ D L L +++ P+L KL + + + + T DQ +
Sbjct: 14 NQLLLLYKRLDKKKIADVLL-LMEKENIKPSLFTYKLLIDTKGQSNDLTGMDQIVE---T 69
Query: 101 AKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMP 160
K GI+ N L + H G L EKAEA+L++M+ NL
Sbjct: 70 MKADGIEPDINIRAILAK----HYASGGL---------KEKAEAILKEMEGGNLEEHRWA 116
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPD---------------------------- 192
L+ LYA G +++ + + ++S + +
Sbjct: 117 CRLLLPLYAALGKADEVERVWKVCESSPQLEECVAVIEAWGKLKKIDKAEEVFNRMLTTW 176
Query: 193 ----SYTYNVWMRALAAVNDISGAERVIEEMKRDG-RVAADWTTFSNLASIYVEAGLFEK 247
S Y+ ++ A+ ++ + +I++M G R+ T+ +L +YVEAG EK
Sbjct: 177 KKLSSRHYSALLKVYASHKMLANGKDLIKKMADSGCRIGP--LTWDSLVKLYVEAGEVEK 234
Query: 248 AERALKELENRNAHRDL-SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI 306
A+ L + +N + + S+Y ++ Y + G++ +++ +R A + ++
Sbjct: 235 ADSVLHKAAQQNHMKPMFSSYIVIMDQYAKRGDVHNAEKMFHRMRQAGYVARLRQFQALV 294
Query: 307 QVLVNLK 313
Q +N K
Sbjct: 295 QTYINAK 301
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 157/388 (40%), Gaps = 39/388 (10%)
Query: 129 LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS 188
LL +C E + + E MK S +++LM + G KI +++EMK+
Sbjct: 211 LLPGFCNEALKVYKRMISEGMKP-----SMKTYSALMVALGRRGDTRKIMNLLEEMKSIG 265
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
+ P+ YTY + +RAL I A + +EM +G D T++ L AG +KA
Sbjct: 266 LRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEG-CGPDVITYTVLIDALCAAGKLDKA 324
Query: 249 ERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQV 308
+ ++ + D Y L+ +G+ G+L V R W + + ++Y +I+
Sbjct: 325 KELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEA 384
Query: 309 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 368
L D+ A + ++ N MI K RL+ A EL E G P
Sbjct: 385 LCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPT 444
Query: 369 AKTWEIFSDYYLRNGDMKLAVDCLEKA-------------------IDTGRGDGGKWV-- 407
A ++ +F DYY ++GD A+D E +TGR + +
Sbjct: 445 AFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFN 504
Query: 408 --------PSSETIRTFMRHFEQEKDVDGAEGFL-EILKKAVDDLGVEVFEPLIRTYAAA 458
P S T M+ + + +D A L E++ K + V + LI T A
Sbjct: 505 DLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEP-DVMIINSLINTLYKA 563
Query: 459 GRTSPV--MLRRLKMEKVEVSEASKKLL 484
GR M RLK K+ + + +L
Sbjct: 564 GRVDAAWKMFGRLKNLKLAPTVVTYNIL 591
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 143/363 (39%), Gaps = 50/363 (13%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS---KNHLTYGSLLNCYCKEL 137
ME G V I ++ + K +D A + +D+ T N TY +++ K
Sbjct: 366 MEVDGYAPDVVTYTILIEALCKSGDVDRAFD-MLDVMTTKGIFPNLHTYNTMICGLLKAR 424
Query: 138 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 197
++A LLE M+ L + ++ + + Y K+G P K + MK IMP N
Sbjct: 425 RLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACN 484
Query: 198 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 257
+ LA IS AE + ++ + G ++ D T++ L Y +AG +KA + L E+ +
Sbjct: 485 ASLYTLAETGRISEAEDIFNDLHKCG-LSPDSVTYNMLMKCYSKAGQIDKATQLLSEMIS 543
Query: 258 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 317
+ D+ LI + G + ++++ L+ NLK P
Sbjct: 544 KGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLK-------------------NLKLAPT 584
Query: 318 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 377
TY+I +T + KEG++ A EL G PN T+ D
Sbjct: 585 V-----------VTYNILLTGL-----GKEGKILKALELFGSMTESGCPPNTITFNSLLD 628
Query: 378 YYLRNG--DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEI 435
+N D+ L + C ++ P T T + +E +D A F
Sbjct: 629 CLSKNDAVDLALKMFCRMTMMNCN--------PDVLTYNTIIYGLIREGRIDYAFWFFHQ 680
Query: 436 LKK 438
+KK
Sbjct: 681 MKK 683
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 130/299 (43%), Gaps = 7/299 (2%)
Query: 75 LKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNC 132
+ L E M+ G+ + I + + + + ID A F ++ + + +TY L++
Sbjct: 255 MNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDA 314
Query: 133 YCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPD 192
C +KA+ L KM+ + + + +LM + K G E + EM+ PD
Sbjct: 315 LCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPD 374
Query: 193 SYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERAL 252
TY + + AL D+ A +++ M G + + T++ + ++A ++A L
Sbjct: 375 VVTYTILIEALCKSGDVDRAFDMLDVMTTKG-IFPNLHTYNTMICGLLKARRLDEALELL 433
Query: 253 KELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLV 310
+ +E+ +Y I YG++G+ ++ + ++ R P+ A + + L
Sbjct: 434 ENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACN--ASLYTLA 491
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
+ AE F + + D N+++ Y+K G+++ A +L +G +P+
Sbjct: 492 ETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDV 550
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 126/323 (39%), Gaps = 42/323 (13%)
Query: 63 KKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL--PETS 120
K R KLY L M RG I + + K ++ A + + +L + S
Sbjct: 843 KSKRINKLY----DLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFS 898
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
TYG L++ K +E+A + E+M + G +S+ +N L+ + K+G + +
Sbjct: 899 PTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACEL 958
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
++M I PD +Y + + L I A + EE+K G + D +++ + +
Sbjct: 959 FKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTG-LDPDTVSYNFIINGLG 1017
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
++ ++A E++NR DL Y LI G G + +++ L+L
Sbjct: 1018 KSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLV------- 1070
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
E TY N +I ++ G + A + ++
Sbjct: 1071 -----------------------GLEPSVFTY-----NALIRGHSLSGNKDQAFSVFKKM 1102
Query: 361 RRRGADPNAKTWEIFSDYYLRNG 383
G PN +T+ + Y R G
Sbjct: 1103 MVVGCSPNTETFAQLPNKYPRAG 1125
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/369 (20%), Positives = 145/369 (39%), Gaps = 50/369 (13%)
Query: 87 NKTVSDQAIHLDLVAKV----QGIDAAENYFVDLPETSKNHLT---YGSLLNCYCKELMT 139
N D + L L+ + + +DA +N F + H T Y L++ T
Sbjct: 754 NSVCQDDHVMLPLIKVLCKRKKALDA-QNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFT 812
Query: 140 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 199
EKA L E MK ++ +N L+ + K+ K+ + EM++ P++ T+N+
Sbjct: 813 EKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNII 872
Query: 200 MRALAAVNDI-----------SG------------------------AERVIEEMKRDGR 224
+ AL N++ SG A ++ EEM D
Sbjct: 873 ISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEM-LDYG 931
Query: 225 VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVY 284
+ ++ L + + ++G + A K++ DL +Y L+ TG + E
Sbjct: 932 CGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAV 991
Query: 285 RIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAY 344
+ + L+L + +SY +I L + L A F E ++ + D+ N +I
Sbjct: 992 QYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHL 1051
Query: 345 AKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGG 404
G+++ A ++ E + G +P+ T+ + +G+ A +K + G
Sbjct: 1052 GIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVG----- 1106
Query: 405 KWVPSSETI 413
P++ET
Sbjct: 1107 -CSPNTETF 1114
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 5/204 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLN 131
A+ E M+KRG+ +++ L +A+ I AE+ F DL + S + +TY L+
Sbjct: 464 AIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMK 523
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CY K +KA LL +M M NSL+ K G + + +K + P
Sbjct: 524 CYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAP 583
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
TYN+ + L I A + M G + TF++L + + A +
Sbjct: 584 TVVTYNILLTGLGKEGKILKALELFGSMTESG-CPPNTITFNSLLDCLSKNDAVDLALKM 642
Query: 252 LKELENRNAHRDLSAYQFLITLYG 275
+ N + D+ Y +I YG
Sbjct: 643 FCRMTMMNCNPDVLTYNTII--YG 664
>gi|387219093|gb|AFJ69255.1| hypothetical protein NGATSA_2006000, partial [Nannochloropsis
gaditana CCMP526]
Length = 479
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 141/329 (42%), Gaps = 18/329 (5%)
Query: 153 NLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA 212
NL +++ +NSL+T Y G +++ M + + PD+YT+N + A A ++ A
Sbjct: 25 NLKPNAITYNSLLTAYTNAGDMAGAQQVLKRMVQAGLSPDTYTFNTLIAAFVARREVRAA 84
Query: 213 ERVIEEMKRDGRVAADWTTFSNLASIY-VEAGLFEKAERALKELENRNAHRDLSAYQFLI 271
E+++ M+ G V AD T+S L Y + G KAE L+ + + Y +LI
Sbjct: 85 EKMVAYMQEHG-VLADVVTYSQLLQGYATKEGDMGKAEEVLERMARDGVAPNSYTYNYLI 143
Query: 272 TLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCAT 331
Y + G + + +R +++Y ++ +D GAEK +
Sbjct: 144 EGYVKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRMKKEGVQ 203
Query: 332 YDIRVTNVMIGAYAKEGRLENAEEL---------KERARRRGADPNAKTWEIFSDYYLRN 382
+++V ++ AYAK G +E AE + +E + +PN T+ + Y R
Sbjct: 204 ANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEGGGSKDCEPNVHTYSTLMNVYARA 263
Query: 383 GDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDD 442
G A L + G W P+ T T M + + D +GAE L+ ++ A
Sbjct: 264 GLAAGAEGVLTRMTAAG------WAPNVITFTTLMTAYSRAGDPEGAELVLKRMEAAGVS 317
Query: 443 LGVEVFEPLIRTYAAAG-RTSPVMLRRLK 470
V + L+ + G R V RR K
Sbjct: 318 PNVLTYNTLLSATSRMGLREGEVEERRAK 346
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 114/251 (45%), Gaps = 16/251 (6%)
Query: 124 LTYGSLLNCYC-KELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQ 182
+TY LL Y KE KAE +LE+M + +S +N L+ Y K G + +++
Sbjct: 101 VTYSQLLQGYATKEGDMGKAEEVLERMARDGVAPNSYTYNYLIEGYVKAGEMDWAEDVLE 160
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
M+ + P S Y V M A D GAE++++ MK++G V A+ F+ L + Y +
Sbjct: 161 RMRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRMKKEG-VQANVQVFTTLMNAYAKR 219
Query: 243 GLFEKAERALKEL---------ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 293
G E AE L + +++ ++ Y L+ +Y + G + + + A
Sbjct: 220 GDVEGAEGVLARMLAVAEEEGGGSKDCEPNVHTYSTLMNVYARAGLAAGAEGVLTRMTAA 279
Query: 294 --FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLE 351
PN I++ ++ D GAE K E+ + ++ N ++ A ++ G L
Sbjct: 280 GWAPNV--ITFTTLMTAYSRAGDPEGAELVLKRMEAAGVSPNVLTYNTLLSATSRMG-LR 336
Query: 352 NAEELKERARR 362
E + RA+R
Sbjct: 337 EGEVEERRAKR 347
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 138/319 (43%), Gaps = 19/319 (5%)
Query: 172 GHPEKIPAIIQEMK----ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAA 227
G P+ + ++ E + ++ P++ TYN + A D++GA++V++ M + G ++
Sbjct: 5 GQPQVLARLVAEGERAGEGGNLKPNAITYNSLLTAYTNAGDMAGAQQVLKRMVQAG-LSP 63
Query: 228 DWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLY----GQTGNLSEV 283
D TF+ L + +V AE+ + ++ D+ Y L+ Y G G EV
Sbjct: 64 DTYTFNTLIAAFVARREVRAAEKMVAYMQEHGVLADVVTYSQLLQGYATKEGDMGKAEEV 123
Query: 284 YRIWRSLRLAF-PNTANISYLNMIQVLVNLKDLPGAEKCFKEWES-GCATYDIRVTNVMI 341
+ R R PN+ +YL I+ V ++ AE + + G A + V++
Sbjct: 124 --LERMARDGVAPNSYTYNYL--IEGYVKAGEMDWAEDVLERMRTVGLAPTSMNYC-VLM 178
Query: 342 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRG 401
AY + AE++ +R ++ G N + + + Y + GD++ A L + +
Sbjct: 179 DAYTRRRDARGAEKILDRMKKEGVQANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAEE 238
Query: 402 DGG---KWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAA 458
+GG P+ T T M + + GAEG L + A V F L+ Y+ A
Sbjct: 239 EGGGSKDCEPNVHTYSTLMNVYARAGLAAGAEGVLTRMTAAGWAPNVITFTTLMTAYSRA 298
Query: 459 GRTSPVMLRRLKMEKVEVS 477
G L +ME VS
Sbjct: 299 GDPEGAELVLKRMEAAGVS 317
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 120/285 (42%), Gaps = 41/285 (14%)
Query: 60 DTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL--- 116
D + RD + A K+ + M+K G+ V ++ AK ++ AE +
Sbjct: 179 DAYTRRRDAR---GAEKILDRMKKEGVQANVQVFTTLMNAYAKRGDVEGAEGVLARMLAV 235
Query: 117 --------PETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLY 168
+ N TY +L+N Y + + AE +L +M + + F +LMT Y
Sbjct: 236 AEEEGGGSKDCEPNVHTYSTLMNVYARAGLAAGAEGVLTRMTAAGWAPNVITFTTLMTAY 295
Query: 169 AKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAAD 228
++ G PE +++ M+A+ + P+ TYN L+A + + E +EE +R RV
Sbjct: 296 SRAGDPEGAELVLKRMEAAGVSPNVLTYNTL---LSATSRMGLREGEVEE-RRAKRVLQV 351
Query: 229 WTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLIT--LYGQTGNLSEVYRI 286
+ T A + G EKA D + Y L+T L EVY++
Sbjct: 352 YDTMRRSAG---KGGGLEKAP-------------DEATYTVLLTCLLRFPKRLTKEVYKL 395
Query: 287 ----WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES 327
WR L + N ++ +Y + I VL + D F+E ++
Sbjct: 396 ILEDWRRL-VPTRNRSDRNYQSFITVLAAMGDWEEMATVFREAQA 439
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 74/168 (44%), Gaps = 8/168 (4%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
+ N TY L+ Y K + AE +LE+M+ + L +SM + LM Y +
Sbjct: 133 APNSYTYNYLIEGYVKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAYTRRRDARGAEK 192
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM----KRDGRVAADWT----T 231
I+ MK + + + M A A D+ GAE V+ M + +G + D T
Sbjct: 193 ILDRMKKEGVQANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEGGGSKDCEPNVHT 252
Query: 232 FSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGN 279
+S L ++Y AGL AE L + ++ + L+T Y + G+
Sbjct: 253 YSTLMNVYARAGLAAGAEGVLTRMTAAGWAPNVITFTTLMTAYSRAGD 300
>gi|422294671|gb|EKU21971.1| hypothetical protein NGA_2006000, partial [Nannochloropsis gaditana
CCMP526]
Length = 472
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 141/329 (42%), Gaps = 18/329 (5%)
Query: 153 NLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA 212
NL +++ +NSL+T Y G +++ M + + PD+YT+N + A A ++ A
Sbjct: 18 NLKPNAITYNSLLTAYTNAGDMAGAQQVLKRMVQAGLSPDTYTFNTLIAAFVARREVRAA 77
Query: 213 ERVIEEMKRDGRVAADWTTFSNLASIY-VEAGLFEKAERALKELENRNAHRDLSAYQFLI 271
E+++ M+ G V AD T+S L Y + G KAE L+ + + Y +LI
Sbjct: 78 EKMVAYMQEHG-VLADVVTYSQLLQGYATKEGDMGKAEEVLERMARDGVAPNSYTYNYLI 136
Query: 272 TLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCAT 331
Y + G + + +R +++Y ++ +D GAEK +
Sbjct: 137 EGYVKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRMKKEGVQ 196
Query: 332 YDIRVTNVMIGAYAKEGRLENAEEL---------KERARRRGADPNAKTWEIFSDYYLRN 382
+++V ++ AYAK G +E AE + +E + +PN T+ + Y R
Sbjct: 197 ANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEGGGSKDCEPNVHTYSTLMNVYARA 256
Query: 383 GDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDD 442
G A L + G W P+ T T M + + D +GAE L+ ++ A
Sbjct: 257 GLAAGAEGVLTRMTAAG------WAPNVITFTTLMTAYSRAGDPEGAELVLKRMEAAGVS 310
Query: 443 LGVEVFEPLIRTYAAAG-RTSPVMLRRLK 470
V + L+ + G R V RR K
Sbjct: 311 PNVLTYNTLLSATSRMGLREGEVEERRAK 339
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 114/251 (45%), Gaps = 16/251 (6%)
Query: 124 LTYGSLLNCYC-KELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQ 182
+TY LL Y KE KAE +LE+M + +S +N L+ Y K G + +++
Sbjct: 94 VTYSQLLQGYATKEGDMGKAEEVLERMARDGVAPNSYTYNYLIEGYVKAGEMDWAEDVLE 153
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
M+ + P S Y V M A D GAE++++ MK++G V A+ F+ L + Y +
Sbjct: 154 RMRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRMKKEG-VQANVQVFTTLMNAYAKR 212
Query: 243 GLFEKAERALKEL---------ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 293
G E AE L + +++ ++ Y L+ +Y + G + + + A
Sbjct: 213 GDVEGAEGVLARMLAVAEEEGGGSKDCEPNVHTYSTLMNVYARAGLAAGAEGVLTRMTAA 272
Query: 294 --FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLE 351
PN I++ ++ D GAE K E+ + ++ N ++ A ++ G L
Sbjct: 273 GWAPNV--ITFTTLMTAYSRAGDPEGAELVLKRMEAAGVSPNVLTYNTLLSATSRMG-LR 329
Query: 352 NAEELKERARR 362
E + RA+R
Sbjct: 330 EGEVEERRAKR 340
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 131/302 (43%), Gaps = 15/302 (4%)
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ ++ P++ TYN + A D++GA++V++ M + G ++ D TF+ L + +V
Sbjct: 15 EGGNLKPNAITYNSLLTAYTNAGDMAGAQQVLKRMVQAG-LSPDTYTFNTLIAAFVARRE 73
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLY----GQTGNLSEVYRIWRSLRLAF-PNTAN 299
AE+ + ++ D+ Y L+ Y G G EV + R R PN+
Sbjct: 74 VRAAEKMVAYMQEHGVLADVVTYSQLLQGYATKEGDMGKAEEV--LERMARDGVAPNSYT 131
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+YL I+ V ++ AE + + G A + V++ AY + AE++ +
Sbjct: 132 YNYL--IEGYVKAGEMDWAEDVLERMRTVGLAPTSMNYC-VLMDAYTRRRDARGAEKILD 188
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGG---KWVPSSETIRT 415
R ++ G N + + + Y + GD++ A L + + +GG P+ T T
Sbjct: 189 RMKKEGVQANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEGGGSKDCEPNVHTYST 248
Query: 416 FMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVE 475
M + + GAEG L + A V F L+ Y+ AG L +ME
Sbjct: 249 LMNVYARAGLAAGAEGVLTRMTAAGWAPNVITFTTLMTAYSRAGDPEGAELVLKRMEAAG 308
Query: 476 VS 477
VS
Sbjct: 309 VS 310
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 120/285 (42%), Gaps = 41/285 (14%)
Query: 60 DTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL--- 116
D + RD + A K+ + M+K G+ V ++ AK ++ AE +
Sbjct: 172 DAYTRRRDAR---GAEKILDRMKKEGVQANVQVFTTLMNAYAKRGDVEGAEGVLARMLAV 228
Query: 117 --------PETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLY 168
+ N TY +L+N Y + + AE +L +M + + F +LMT Y
Sbjct: 229 AEEEGGGSKDCEPNVHTYSTLMNVYARAGLAAGAEGVLTRMTAAGWAPNVITFTTLMTAY 288
Query: 169 AKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAAD 228
++ G PE +++ M+A+ + P+ TYN L+A + + E +EE +R RV
Sbjct: 289 SRAGDPEGAELVLKRMEAAGVSPNVLTYNTL---LSATSRMGLREGEVEE-RRAKRVLQV 344
Query: 229 WTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLIT--LYGQTGNLSEVYRI 286
+ T A + G EKA D + Y L+T L EVY++
Sbjct: 345 YDTMRRSAG---KGGGLEKAP-------------DEATYTVLLTCLLRFPKRLTKEVYKL 388
Query: 287 ----WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES 327
WR L + N ++ +Y + I VL + D F+E ++
Sbjct: 389 ILEDWRRL-VPTRNRSDRNYQSFITVLAAMGDWEEMATVFREAQA 432
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 74/168 (44%), Gaps = 8/168 (4%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
+ N TY L+ Y K + AE +LE+M+ + L +SM + LM Y +
Sbjct: 126 APNSYTYNYLIEGYVKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAYTRRRDARGAEK 185
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM----KRDGRVAADWT----T 231
I+ MK + + + M A A D+ GAE V+ M + +G + D T
Sbjct: 186 ILDRMKKEGVQANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEGGGSKDCEPNVHT 245
Query: 232 FSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGN 279
+S L ++Y AGL AE L + ++ + L+T Y + G+
Sbjct: 246 YSTLMNVYARAGLAAGAEGVLTRMTAAGWAPNVITFTTLMTAYSRAGD 293
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 149/322 (46%), Gaps = 3/322 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
ALK+ ++M++ G+ + I +D + K Q +D A + F+ L + + +T+ SL++
Sbjct: 430 ALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLID 489
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ A L EKM + +++ + SL+ + K G E I +EM P
Sbjct: 490 GLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSP 549
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D N +M + +I + EE+K G + D ++S L V+ G + +
Sbjct: 550 DLMLLNNYMDCVFKAGEIEKGRALFEEIKAQG-LTPDVRSYSILIHGLVKGGFSKDTYKL 608
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
E++ + H D AY +I + ++G +++ Y++ ++ ++Y ++I L
Sbjct: 609 FYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAK 668
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+ L A F+E +S ++ V + +I + K GR++ A + E ++G PN T
Sbjct: 669 IDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYT 728
Query: 372 WEIFSDYYLRNGDMKLAVDCLE 393
W D ++ ++ A+ C +
Sbjct: 729 WNCLLDALVKAEEIDEALVCFQ 750
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 97/441 (21%), Positives = 188/441 (42%), Gaps = 32/441 (7%)
Query: 2 AMPQRFGRTKNIAKRSKKHLEEALYD-RLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGD 60
A+ RT+N+ ++LE+ L + + G S+ + + + F+KS+K + V +
Sbjct: 137 ALLMLMARTRNL-----EYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIE 191
Query: 61 TLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS 120
T++K + R Y L G + L L+ ++Q I Y V +
Sbjct: 192 TMRKFKFRPAYSAYTTLI------GALSAAHEADPMLTLLRQMQEI----GYEVTV---- 237
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
HL + +L+ + +E + A +LL++MK + + +N + + K G +
Sbjct: 238 --HL-FTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKF 294
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
E+K+ ++PD T+ + L + A + EE+ + V + ++ + Y
Sbjct: 295 FHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYA-YNTMIMGYG 353
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL-AFPNTAN 299
G F +A L+ + + + AY ++T G+ G + E RI ++++ A PN
Sbjct: 354 SVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAAPNLT- 412
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
SY +I +L +L A K + +I N+MI K RL+ A +
Sbjct: 413 -SYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLG 471
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
+ P++ T+ D R+G + A EK +D+G+ V + IR F +
Sbjct: 472 LDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNA--VVYTSLIRNFFKC 529
Query: 420 FEQEKDVDGAEGFLEILKKAV 440
+E DG + + E++ +
Sbjct: 530 GRKE---DGHKIYKEMMHRGC 547
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 137/342 (40%), Gaps = 30/342 (8%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE---------------------- 118
++ GM KTV D LD ++ A N F ++P+
Sbjct: 61 LKSEGMRKTVHDVCRVLDTYPWGAALEDALNTFDEMPQPELVVGVIRRLKDVRVALHYFR 120
Query: 119 -----TSKNHL--TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKT 171
T + H Y +LL + E E +LE+M G S+ ++ + K+
Sbjct: 121 WVERKTKQLHSPEAYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKS 180
Query: 172 GHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTT 231
+ +I+ M+ P Y + AL+A ++ ++ +M+ G
Sbjct: 181 RKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIG-YEVTVHL 239
Query: 232 FSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 291
F+ L ++ G + A L E+++ + + DL Y I +G+ G + ++ + L+
Sbjct: 240 FTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELK 299
Query: 292 LAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLE 351
++++ +MI VL + + A + F+E +S + + N MI Y G+
Sbjct: 300 SQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFN 359
Query: 352 NAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
A L ER +R+G P+ + R G ++ A+ LE
Sbjct: 360 EAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILE 401
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 85/459 (18%), Positives = 167/459 (36%), Gaps = 80/459 (17%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
AL L + M+ N + + +D KV +D A +F +L + +T+ S++
Sbjct: 256 ALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIG 315
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK ++A L E++ +N+++ Y G + ++++ K +P
Sbjct: 316 VLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIP 375
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE---KA 248
YN + L + A R++E MK D A + T+++ L + +AG E K
Sbjct: 376 SVIAYNCILTCLGRKGKVEEALRILEAMKMDA--APNLTSYNILIDMLCKAGELEAALKV 433
Query: 249 ERALKE--------------------------------LENRNAHRDLSAYQFLITLYGQ 276
+ ++KE L+++ D + LI G+
Sbjct: 434 QDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGR 493
Query: 277 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCA----- 330
G +++ Y ++ + + + Y ++I+ K +KE GC+
Sbjct: 494 HGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLML 553
Query: 331 -----------------------------TYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
T D+R +++I K G ++ +L +
Sbjct: 554 LNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMK 613
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
+G + + + I D + ++G + A LE+ G P+ T + +
Sbjct: 614 EQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKG------LQPTVVTYGSVIDGLA 667
Query: 422 QEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 460
+ +D A E K DL V V+ LI + GR
Sbjct: 668 KIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGR 706
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 117/274 (42%), Gaps = 8/274 (2%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y +++ +CK KA LLE+MK L + + + S++ AK ++ + +E K
Sbjct: 624 YNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 683
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
+ ++ + Y+ + V I A ++EE+ + G + + T++ L V+A
Sbjct: 684 SKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKG-LTPNTYTWNCLLDALVKAEEI 742
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
++A + ++N + Y ++ + ++ + W+ ++ I+Y M
Sbjct: 743 DEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTM 802
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
I L + ++ A+ F+ ++S D N MI + + +A L E R +G
Sbjct: 803 ISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKGC 862
Query: 366 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+KT + D + DCLE+A G
Sbjct: 863 RIYSKTCVVLLDALHK-------ADCLEQAAIVG 889
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 115/249 (46%), Gaps = 11/249 (4%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TYGS+++ K ++A L E+ K + + + ++SL+ + K G ++ I++E
Sbjct: 657 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEE 716
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
+ + P++YT+N + AL +I A + MK + + + T+S + + +
Sbjct: 717 LMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMK-NLKCPPNEVTYSIMVNGLCKVR 775
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANIS 301
F KA +E++ + + Y +I+ + GN+ E ++ + + P++A
Sbjct: 776 KFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSA--C 833
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWE-SGCATYDIRVTNVMIGAYAKEGRLENA----EEL 356
Y MI+ L N A F+E GC Y + V++ A K LE A L
Sbjct: 834 YNAMIEGLSNANKAMDAYILFEETRLKGCRIYS-KTCVVLLDALHKADCLEQAAIVGAVL 892
Query: 357 KERARRRGA 365
+E A+ + A
Sbjct: 893 REMAKSQHA 901
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 147/328 (44%), Gaps = 12/328 (3%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
+ N +T +L++ C+ E+A LL++M E L S+ +N+L+ K G E+
Sbjct: 439 AANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFK 498
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+ +EM I PD YTYN+ + L + I A + E K++G D T+ + Y
Sbjct: 499 LKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFP-DAYTYGIMIDGY 557
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL-AFPNTA 298
+A E+ E+ +E+ ++ Y LI Y + GN+ E +R+ +R P T+
Sbjct: 558 CKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTS 617
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+Y ++I L N+ + A + E + ++ +IG Y K G++ + + +
Sbjct: 618 -ATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQ 676
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 418
PN T+ I + + + G+MK A L + G VP + T
Sbjct: 677 EMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKG------IVPDAVTYNALTN 730
Query: 419 HFEQEKDVDGAEGFLEILKK---AVDDL 443
F +E ++ A +++ ++DD+
Sbjct: 731 GFCKEGKMEEALKVCDLMSTGGISLDDI 758
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 144/347 (41%), Gaps = 29/347 (8%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TYG L+N K ++A +L++M + +++ +N+L+ Y + G+ I +
Sbjct: 268 VTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDD 327
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M ++ I P+S T N ++ N + AE ++EEM G V + TF+++
Sbjct: 328 MISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGV-INQGTFTSVIHRLCLKC 386
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW-RSLRLAFPNTANISY 302
F+ A + E+ RN + L++ Q G SE +W R L F AN
Sbjct: 387 RFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGF--AANTVT 444
Query: 303 LN-MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
N +I L A K KE D N +I A KEG++E +LKE
Sbjct: 445 SNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMV 504
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKW--------VPSSETI 413
RRG P+ T+ + G ++ A GG W P + T
Sbjct: 505 RRGIQPDMYTYNMLLHGLCNMGKIEEA--------------GGLWHECKKNGNFPDAYTY 550
Query: 414 RTFMRHFEQEKDV-DGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
+ + + V +G + F E++ ++ V V+ LIR Y G
Sbjct: 551 GIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAV-VYGTLIRAYCENG 596
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/215 (19%), Positives = 89/215 (41%), Gaps = 38/215 (17%)
Query: 94 AIHLDLVAKVQGIDAAENYFVDLP--ETSKNHLTYGSLLNCYCKE--------------- 136
I +D K ++ E F ++ + +N + YG+L+ YC+
Sbjct: 551 GIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRS 610
Query: 137 --------------------LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK 176
+ + A LL++M++ L + + + +L+ Y K G K
Sbjct: 611 RGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHK 670
Query: 177 IPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLA 236
+ +I+QEM +++ P+ TY + + + ++ A +++ EM + G + D T++ L
Sbjct: 671 VDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKG-IVPDAVTYNALT 729
Query: 237 SIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 271
+ + + G E+A + + D Y LI
Sbjct: 730 NGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLI 764
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 80/164 (48%), Gaps = 3/164 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A +L ++M RG+ +T + + + ++ + +D+A ++ + S N + Y +L+
Sbjct: 601 AFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIG 660
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
YCK K +++L++M N+ + + + ++ + K G+ + ++ EM I+P
Sbjct: 661 GYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVP 720
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
D+ TYN + A +V + M G ++ D T++ L
Sbjct: 721 DAVTYNALTNGFCKEGKMEEALKVCDLMSTGG-ISLDDITYTTL 763
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/239 (19%), Positives = 98/239 (41%), Gaps = 1/239 (0%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
F++++ + G + + ++M+ + P+ TYN + L + A + E+M+
Sbjct: 200 FSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKME 259
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
++ RV T+ L + V+ F++A LKE+ +R + Y LI Y + GN+
Sbjct: 260 KE-RVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNI 318
Query: 281 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 340
S +I + + +++ ++IQ + AE +E +G + +
Sbjct: 319 STALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSV 378
Query: 341 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
I + R ++A R PN + +NG A++ + ++ G
Sbjct: 379 IHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKG 437
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 147/305 (48%), Gaps = 10/305 (3%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLN 131
A+KL E M +RG + + +D + K+ + AA++ + E + N +T+ SL++
Sbjct: 76 AMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVD 135
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+CK + A LL M + + + +++L+ K+ + +++EMKAS + P
Sbjct: 136 GFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTP 195
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D++TY+ + L + I AE+++ M G D +S++ + ++G +A++
Sbjct: 196 DAFTYSALIHGLCKADKIEEAEQMLRRMAGSG-CTPDVVVYSSIIHAFCKSGKLLEAQKT 254
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA---FPNTANISYLNMIQV 308
L+E+ + D+ Y +I + G ++E I ++ + P+ ++Y +I
Sbjct: 255 LQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDV--VTYSTVING 312
Query: 309 LVNLKDLPGAEKCF-KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
L L A+K + ++GC D+ +I K GRLE AE L + +R G P
Sbjct: 313 LCKSDMLVEAQKLLDRMCKAGC-NPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAP 371
Query: 368 NAKTW 372
N T+
Sbjct: 372 NVVTY 376
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 158/359 (44%), Gaps = 10/359 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY L++ CK M A+ +++KM E + M FNSL+ + K G+ + ++
Sbjct: 91 NLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLL 150
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M A + P+ TY+ + L A+ V+EEMK G V D T+S L +
Sbjct: 151 GIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASG-VTPDAFTYSALIHGLCK 209
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
A E+AE+ L+ + D+ Y +I + ++G L E + + +R + ++
Sbjct: 210 ADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVT 269
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
Y +I L L + A+ + ESG D+ + +I K L A++L +R
Sbjct: 270 YNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRM 329
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 420
+ G +P+ T+ D + G ++ A L+ G P+ T T +
Sbjct: 330 CKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAG------CAPNVVTYTTLISGL 383
Query: 421 EQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPV--MLRRLKMEKVEVS 477
+ + VD AE +E ++ A + + ++ +GR +++R+K + E S
Sbjct: 384 CKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECS 442
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 139/303 (45%), Gaps = 4/303 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLN 131
A KL M +GM V + +D + K Q A+ ++ + + + TY +L++
Sbjct: 146 ARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIH 205
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK E+AE +L +M + ++S++ + K+G + +QEM+ P
Sbjct: 206 GLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSP 265
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D TYN + L + I+ A+ ++++M+ G V D T+S + + ++ + +A++
Sbjct: 266 DVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKL 325
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
L + + D+ Y +I + G L E + + ++ A ++Y +I L
Sbjct: 326 LDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCK 385
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR--RRGADPNA 369
+ + AE+ +E + ++ N M+ GR++ A++L +R + R P+A
Sbjct: 386 ARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDA 445
Query: 370 KTW 372
T+
Sbjct: 446 ATY 448
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/316 (19%), Positives = 140/316 (44%), Gaps = 8/316 (2%)
Query: 146 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 205
++ ++ + + + + +L+ +A+ E+ +++EM+ P+ TYNV + AL
Sbjct: 45 MDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCK 104
Query: 206 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 265
++ + A+ V+++M +G A + TF++L + + G + A + L + + ++
Sbjct: 105 LSMVGAAQDVVKKMI-EGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVV 163
Query: 266 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 325
Y LI ++ E + ++ + +Y +I L + AE+ +
Sbjct: 164 TYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRM 223
Query: 326 E-SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 384
SGC T D+ V + +I A+ K G+L A++ + R++ P+ T+ D + G
Sbjct: 224 AGSGC-TPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGK 282
Query: 385 MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLG 444
+ A L++ ++ G +P T T + + + A+ L+ + KA +
Sbjct: 283 IAEAQVILDQMQES-----GDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPD 337
Query: 445 VEVFEPLIRTYAAAGR 460
V + +I GR
Sbjct: 338 VVTYTTIIDGLCKCGR 353
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/241 (19%), Positives = 94/241 (39%), Gaps = 39/241 (16%)
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+++EMK++ PD++T+ + A+A D+ GA + M D V T++ L + +
Sbjct: 12 LLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNV----VTYTALIAAF 67
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLI------TLYGQT---------GNLSEVY 284
A E+A + L+E+ R +L Y L+ ++ G G +
Sbjct: 68 ARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNV 127
Query: 285 RIWRSLRLAFPNTAN--------------------ISYLNMIQVLVNLKDLPGAEKCFKE 324
+ SL F N ++Y +I L + A++ +E
Sbjct: 128 MTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEE 187
Query: 325 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 384
++ T D + +I K ++E AE++ R G P+ + + ++G
Sbjct: 188 MKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGK 247
Query: 385 M 385
+
Sbjct: 248 L 248
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 75/150 (50%), Gaps = 4/150 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A KL + M K G N V +D + K ++ AE + + N +TY +L++
Sbjct: 322 AQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLIS 381
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKA--SSI 189
CK ++AE ++E+M+ + + +N+++ +G ++ ++Q MK +
Sbjct: 382 GLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAEC 441
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEM 219
PD+ TY + AL + + + AE+++E+M
Sbjct: 442 SPDAATYRTIVNALMSSDLVQEAEQLLEQM 471
>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
Length = 754
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 149/348 (42%), Gaps = 10/348 (2%)
Query: 117 PETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK 176
PE + TY L+NCY + + + ++ LG +N+L+ ++K G +K
Sbjct: 112 PEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDK 171
Query: 177 IPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLA 236
+ +M+ IMP+ TY+ + L ++ AERV+ +M G V + T++ L
Sbjct: 172 AHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAG-VRPNNMTYNCLI 230
Query: 237 SIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPN 296
Y +G+++++ R KE+ + D+ +T + G + E I+ S+ L P
Sbjct: 231 HGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPK 290
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
ISY ++ + G + F D V N +I AYA+ G ++ + +
Sbjct: 291 PDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLM 350
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTF 416
E ++G +P+ T+ + R G + A++ IDTG VP + +
Sbjct: 351 FEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTG-------VPPDTAVYSC 403
Query: 417 MRHFEQEKD--VDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTS 462
+ + + V E ++L K + ++ F +I GR +
Sbjct: 404 LIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVA 451
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 148/357 (41%), Gaps = 43/357 (12%)
Query: 83 KRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTE 140
+ G+ V +D +K +D A + F + E N +TY SL+N CK +
Sbjct: 146 RTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMD 205
Query: 141 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 200
KAE +L +M + ++M +N L+ Y+ +G ++ + +EM +S ++PD N +M
Sbjct: 206 KAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFM 265
Query: 201 RAL-----------------------------------AAVNDISGAERVIEEMKRDGRV 225
AL A I+G + + M +G V
Sbjct: 266 TALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEG-V 324
Query: 226 AADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 285
D F+ L + Y G+ +K+ +++ + + D+ + +I+ + + G L +
Sbjct: 325 VPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAME 384
Query: 286 IWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES-GCATYDIRVTNVMIG 342
+ + P+TA Y +IQ N +DL A++ + S G I+ +I
Sbjct: 385 KFNHMIDTGVPPDTA--VYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIIN 442
Query: 343 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
KEGR+ +++ + G PN T+ D Y G+MK AV L+ G
Sbjct: 443 NLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVG 499
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 108/262 (41%), Gaps = 1/262 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +T+ SL++ YC ++A LL+ M+ + + +N+L+ Y K G + +
Sbjct: 468 NLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLF 527
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
++M + S +YN+ + L A+ + EM G +A T++ +
Sbjct: 528 RDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESG-MAVSIHTYATVLGGLCR 586
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
++A L++L + N D+ + +I + G E ++ ++ ++
Sbjct: 587 NNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILT 646
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y MI L+ + A+ F E T D R+ N +I +G + A +
Sbjct: 647 YRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKID 706
Query: 362 RRGADPNAKTWEIFSDYYLRNG 383
++G P A T + + NG
Sbjct: 707 KKGILPEATTTSLLIYLFSVNG 728
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 70/171 (40%), Gaps = 8/171 (4%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY ++L C+ T++A LLEK+ +N+ F + FN ++ K G ++ + +
Sbjct: 576 TYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAI 635
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
++P TY V + L A+ + M++ D + + + + G
Sbjct: 636 STYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSS-CTPDSRILNEIIRMLLNKGE 694
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGN-------LSEVYRIWR 288
KA L +++ + + + LI L+ G L E YR R
Sbjct: 695 VAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPEKYRFLR 745
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 159/359 (44%), Gaps = 10/359 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY L++ CK M A+ +++KM E + M FNSL+ + K G+ + ++
Sbjct: 213 NLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLL 272
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M A + P+ TY+ + L A+ V+EEMK G V D T+S L +
Sbjct: 273 GIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRG-VTPDAFTYSALIHGLCK 331
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
A E+AE+ L+ + D+ Y +I + ++G L E + + +R + ++
Sbjct: 332 ADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVT 391
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
Y +I L L + A+ ++ ESG D+ + +I K L A++L +R
Sbjct: 392 YNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRM 451
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 420
+ G +P+ T+ D + G ++ A L+ G P+ T T +
Sbjct: 452 CKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAG------CAPNVVTYTTLISGL 505
Query: 421 EQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPV--MLRRLKMEKVEVS 477
+ + VD AE +E ++ A + + ++ +GR +++R+K + E S
Sbjct: 506 CKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECS 564
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 145/305 (47%), Gaps = 10/305 (3%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLN 131
A+KL E M +RG + + +D + K+ + AA++ + E + N +T+ SL++
Sbjct: 198 AMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVD 257
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+CK + A LL M + + + +++L+ K+ + +++EMK + P
Sbjct: 258 GFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTP 317
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D++TY+ + L + I AE+++ M G D +S++ + ++G +A++
Sbjct: 318 DAFTYSALIHGLCKADKIEEAEQMLRRMAGSG-CTPDVVVYSSIIHAFCKSGKLLEAQKT 376
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA---FPNTANISYLNMIQV 308
L+E+ + D+ Y +I + G ++E I ++ + P+ ++Y +I
Sbjct: 377 LQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDV--VTYSTVING 434
Query: 309 LVNLKDLPGAEKCF-KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
L L A+K + ++GC D+ +I K GRLE AE L + +R G P
Sbjct: 435 LCKSDMLVEAQKLLDRMCKAGC-NPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAP 493
Query: 368 NAKTW 372
N T+
Sbjct: 494 NVVTY 498
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 138/303 (45%), Gaps = 4/303 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A KL M +GM V + +D + K Q A+ ++ + + TY +L++
Sbjct: 268 ARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIH 327
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK E+AE +L +M + ++S++ + K+G + +QEM+ P
Sbjct: 328 GLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSP 387
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D TYN + L + I+ A+ ++E+M+ G V D T+S + + ++ + +A++
Sbjct: 388 DVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKL 447
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
L + + D+ Y +I + G L E + + ++ A ++Y +I L
Sbjct: 448 LDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCK 507
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR--RRGADPNA 369
+ + AE+ +E + ++ N M+ GR++ A++L +R + R P+A
Sbjct: 508 ARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDA 567
Query: 370 KTW 372
T+
Sbjct: 568 ATY 570
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/315 (19%), Positives = 136/315 (43%), Gaps = 6/315 (1%)
Query: 146 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 205
++ ++ + + + + +L+ +A+ E+ +++EM+ P+ TYNV + AL
Sbjct: 167 MDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCK 226
Query: 206 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 265
++ + A+ V+++M +G A + TF++L + + G + A + L + + ++
Sbjct: 227 LSMVGAAQDVVKKMI-EGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVV 285
Query: 266 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 325
Y LI ++ E + ++ +Y +I L + AE+ +
Sbjct: 286 TYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRM 345
Query: 326 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 385
T D+ V + +I A+ K G+L A++ + R++ P+ T+ D + G +
Sbjct: 346 AGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKI 405
Query: 386 KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGV 445
A LE+ ++ G +P T T + + + A+ L+ + KA + V
Sbjct: 406 AEAQVILEQMQES-----GDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDV 460
Query: 446 EVFEPLIRTYAAAGR 460
+ +I GR
Sbjct: 461 VTYTTIIDGLCKCGR 475
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 123/310 (39%), Gaps = 16/310 (5%)
Query: 155 GFSSMPF--NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA 212
GFS F NSL+ + + + + + +S PD +YN+ + D+ A
Sbjct: 72 GFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAA 131
Query: 213 ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLIT 272
++EEMK G A D T + + + AG + A+ L + ++ Y LI
Sbjct: 132 LELLEEMKSAG-FAPDAFTHTPIITAMANAGDLDG---AMDHLRSMGCDPNVVTYTALIA 187
Query: 273 LYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCA 330
+ + L E ++ + R PN ++Y ++ L L + A+ K+ G
Sbjct: 188 AFARAKKLEEAMKLLEEMRERGCPPNL--VTYNVLVDALCKLSMVGAAQDVVKKMIEGGF 245
Query: 331 TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
++ N ++ + K G +++A +L +G PN T+ D ++ A +
Sbjct: 246 APNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKE 305
Query: 391 CLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEP 450
LE+ G P + T + + ++ AE L + + V V+
Sbjct: 306 VLEEMKTRG------VTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 359
Query: 451 LIRTYAAAGR 460
+I + +G+
Sbjct: 360 IIHAFCKSGK 369
>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
Length = 825
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 149/348 (42%), Gaps = 10/348 (2%)
Query: 117 PETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK 176
PE + TY L+NCY + + + ++ LG +N+L+ ++K G +K
Sbjct: 183 PEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDK 242
Query: 177 IPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLA 236
+ +M+ IMP+ TY+ + L ++ AERV+ +M G V + T++ L
Sbjct: 243 AHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAG-VRPNNMTYNCLI 301
Query: 237 SIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPN 296
Y +G+++++ R KE+ + D+ +T + G + E I+ S+ L P
Sbjct: 302 HGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPK 361
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
ISY ++ + G + F D V N +I AYA+ G ++ + +
Sbjct: 362 PDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLM 421
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTF 416
E ++G +P+ T+ + R G + A++ IDTG VP + +
Sbjct: 422 FEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTG-------VPPDTAVYSC 474
Query: 417 MRHFEQEKD--VDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTS 462
+ + + V E ++L K + ++ F +I GR +
Sbjct: 475 LIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVA 522
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 148/357 (41%), Gaps = 43/357 (12%)
Query: 83 KRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTE 140
+ G+ V +D +K +D A + F + E N +TY SL+N CK +
Sbjct: 217 RTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMD 276
Query: 141 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 200
KAE +L +M + ++M +N L+ Y+ +G ++ + +EM +S ++PD N +M
Sbjct: 277 KAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFM 336
Query: 201 RAL-----------------------------------AAVNDISGAERVIEEMKRDGRV 225
AL A I+G + + M +G V
Sbjct: 337 TALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEG-V 395
Query: 226 AADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 285
D F+ L + Y G+ +K+ +++ + + D+ + +I+ + + G L +
Sbjct: 396 VPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAME 455
Query: 286 IWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES-GCATYDIRVTNVMIG 342
+ + P+TA Y +IQ N +DL A++ + S G I+ +I
Sbjct: 456 KFNHMIDTGVPPDTA--VYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIIN 513
Query: 343 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
KEGR+ +++ + G PN T+ D Y G+MK AV L+ G
Sbjct: 514 NLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVG 570
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 108/262 (41%), Gaps = 1/262 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +T+ SL++ YC ++A LL+ M+ + + +N+L+ Y K G + +
Sbjct: 539 NLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLF 598
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
++M + S +YN+ + L A+ + EM G +A T++ +
Sbjct: 599 RDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESG-MAVSIHTYATVLGGLCR 657
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
++A L++L + N D+ + +I + G E ++ ++ ++
Sbjct: 658 NNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILT 717
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y MI L+ + A+ F E T D R+ N +I +G + A +
Sbjct: 718 YRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKID 777
Query: 362 RRGADPNAKTWEIFSDYYLRNG 383
++G P A T + + NG
Sbjct: 778 KKGILPEATTTSLLIYLFSVNG 799
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 70/171 (40%), Gaps = 8/171 (4%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY ++L C+ T++A LLEK+ +N+ F + FN ++ K G ++ + +
Sbjct: 647 TYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAI 706
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
++P TY V + L A+ + M++ D + + + + G
Sbjct: 707 STYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSS-CTPDSRILNEIIRMLLNKGE 765
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGN-------LSEVYRIWR 288
KA L +++ + + + LI L+ G L E YR R
Sbjct: 766 VAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPEKYRFLR 816
>gi|413923718|gb|AFW63650.1| hypothetical protein ZEAMMB73_248832 [Zea mays]
Length = 478
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/80 (62%), Positives = 61/80 (76%)
Query: 77 LSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKE 136
LSE M + GMN TVSDQAI LDL+AK + + AA+ YF+DLPETSK + Y +LLN Y K
Sbjct: 203 LSEVMVRSGMNPTVSDQAILLDLIAKSRCVVAAKKYFLDLPETSKTYFRYHALLNSYSKV 262
Query: 137 LMTEKAEALLEKMKELNLGF 156
LM EKAE+L+EKM+ELN F
Sbjct: 263 LMIEKAESLVEKMEELNFPF 282
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 150/322 (46%), Gaps = 3/322 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
ALK+ + M++ G+ + I +D + K Q +D A + F+ L S + T+ SL++
Sbjct: 431 ALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLID 490
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ + A +L EKM + + + + + SL+ + K G E I +EM P
Sbjct: 491 GLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSP 550
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D N +M + ++ + EE+K G V D ++S L V+AG + +
Sbjct: 551 DLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVP-DVRSYSILIHGLVKAGFSRETYKL 609
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
E++ + H D+ AY +I + ++G + + Y++ ++ ++Y +++ L
Sbjct: 610 FYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAK 669
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+ L A F+E +S ++ + + +I + K GR++ A + E ++G PN+ T
Sbjct: 670 IDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYT 729
Query: 372 WEIFSDYYLRNGDMKLAVDCLE 393
W D ++ ++ A C +
Sbjct: 730 WNCLLDALVKAEEIDEAQVCFQ 751
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 130/303 (42%), Gaps = 4/303 (1%)
Query: 90 VSDQAIHLDLVAKVQGIDAAENYFVDLP-ETSKNHL--TYGSLLNCYCKELMTEKAEALL 146
+S + + ++ +++ ++ A YF + +T + H Y + L + + E +L
Sbjct: 97 MSQPEVIVGVMKRLKDVNVAFQYFRWVERKTQQAHCPEVYNAFLMVMARTRNLDYLEQIL 156
Query: 147 EKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV 206
E+M G S+ L+ + K+ ++ +I+ M+ P Y + AL+A
Sbjct: 157 EEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAA 216
Query: 207 NDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSA 266
N + +M+ G A+ F+ L ++ G + A L E+++ + DL
Sbjct: 217 NRPDPMLTLFHQMQEIG-YEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVL 275
Query: 267 YQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE 326
Y I +G+ G + ++ + ++ +++Y +I VL + L A + F+E +
Sbjct: 276 YNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELD 335
Query: 327 SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 386
+ + N MI Y G+ + A L ER +R+G P+ + R G ++
Sbjct: 336 LNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVE 395
Query: 387 LAV 389
A+
Sbjct: 396 EAL 398
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 117/276 (42%), Gaps = 8/276 (2%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
L Y ++++ +CK +KA LLE+MK L + + + S++ AK ++ + +E
Sbjct: 623 LAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEE 682
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
K+ + + Y+ + V I A ++EE+ + G +T ++ L V+A
Sbjct: 683 AKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYT-WNCLLDALVKAE 741
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
++A+ + ++N + Y +I ++ + W+ ++ NI+Y
Sbjct: 742 EIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYT 801
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
MI L ++ A F +++ D N MI + + +A + E R +
Sbjct: 802 TMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLK 861
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
G N+KT + D + DCLE+A G
Sbjct: 862 GCRVNSKTCVVLLDALHK-------ADCLEQAAIVG 890
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/351 (20%), Positives = 142/351 (40%), Gaps = 47/351 (13%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
AL L + M+ + + +D KV +D A +F ++ + +TY +L+
Sbjct: 257 ALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIG 316
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSM-PFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
CK ++A L E++ +LN + +N+++ Y G ++ ++++ K +
Sbjct: 317 VLCKARRLDEAVELFEEL-DLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCI 375
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE---K 247
P YN + L + A R+ +EM++D A + TT++ L + +AG E K
Sbjct: 376 PSVIAYNCILTCLGRKGKVEEALRIHDEMRQDA--APNLTTYNILIDMLCKAGELEAALK 433
Query: 248 AERALKE--------------------------------LENRNAHRDLSAYQFLITLYG 275
+ +KE L+++ D + LI G
Sbjct: 434 VQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLG 493
Query: 276 QTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATY 332
+ G + + Y ++ + + PN + Y ++IQ K +KE GC+
Sbjct: 494 RRGRVDDAYSLYEKMLDSDQIPNV--VVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSP- 550
Query: 333 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
D+ + N + K G +E L E + +G P+ +++ I ++ G
Sbjct: 551 DLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAG 601
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 132/286 (46%)
Query: 114 VDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGH 173
++L S + ++ L++C+C+ A ++L KM +L S + F SL+ +
Sbjct: 91 MELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNR 150
Query: 174 PEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFS 233
+++ M S P+ YN + L D++ A ++ EM++ GR+AAD T++
Sbjct: 151 IHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYN 210
Query: 234 NLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 293
L + +G + +A R L+++ R + D+ + LI + + GNL E +++ + +
Sbjct: 211 TLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQS 270
Query: 294 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
++Y ++I L L A+K F S ++ N +I + K R+E+
Sbjct: 271 SIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDG 330
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+L +R R G + T+ Y + G +++A D + G
Sbjct: 331 MKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCG 376
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 132/307 (42%), Gaps = 7/307 (2%)
Query: 97 LDLVAKVQGIDAAENYFVDLPETSKNH--LTYGSLLNCYCKELMTEKAEALLEKMKELNL 154
L +AK+ D F + +H ++ L++C+C+ A ALL KM +L
Sbjct: 622 LTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGF 681
Query: 155 GFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAER 214
S + SL+ + + ++ +++ M + P+ YN + L D++ A
Sbjct: 682 QPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALE 741
Query: 215 VIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLY 274
+ M++ G + AD T++ L S +G + A R L+++ R ++ + LI +
Sbjct: 742 IFYGMEKKG-IVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTF 800
Query: 275 GQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY 332
+ GNL E +++ + R PN ++Y ++I L A+ F S
Sbjct: 801 VKEGNLLEAKNLYKEMIRRSVHPNI--LTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFP 858
Query: 333 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 392
D+ N +I + K R+E+ +L +G +A T+ Y + G + +A
Sbjct: 859 DVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 918
Query: 393 EKAIDTG 399
+ +D G
Sbjct: 919 NRMVDCG 925
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 123/269 (45%), Gaps = 7/269 (2%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+T GSLLN +C+ ++A +L++ M EL L + + +N+++ K I
Sbjct: 686 VTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYG 745
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ I+ D+ TYN + L + A R++ +M + ++ + F+ L +V+ G
Sbjct: 746 MEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKR-KIDPNVIFFTALIDTFVKEG 804
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLI---TLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
+A+ KE+ R+ H ++ Y LI + G+ G+ ++ + S + FP+ +
Sbjct: 805 NLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVS-KGCFPDV--V 861
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
+Y +I K + K F E D N +I Y + G+L A+++ R
Sbjct: 862 TYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRM 921
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAV 389
G P+ T+ I D NG ++ A+
Sbjct: 922 VDCGVPPDIVTYNILLDCLCNNGKIEKAL 950
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 130/328 (39%), Gaps = 4/328 (1%)
Query: 59 GDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE 118
G L R + A L +M K G V +D + K ++ A ++ +
Sbjct: 139 GSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEK 198
Query: 119 TSK---NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
+ + +TY +LL C +A +L M + + F +L+ + K G+ +
Sbjct: 199 KGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLD 258
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
+ + ++M SSI P++ TYN + L + A++ + M G + T++ L
Sbjct: 259 EAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKG-CFPNVVTYNTL 317
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
+ + ++ E + + + D Y LI Y Q G L I+ +
Sbjct: 318 INGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGV 377
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEE 355
I++ ++ L ++ A F + SG I N+MI K ++E A E
Sbjct: 378 TPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWE 437
Query: 356 LKERARRRGADPNAKTWEIFSDYYLRNG 383
L R G P+A+T+ I +NG
Sbjct: 438 LFCRLPVEGVKPDARTYTIMILGLCKNG 465
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 104/239 (43%), Gaps = 3/239 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
A +L +M KR ++ V +D K + A+N + ++ S N LTY SL+N
Sbjct: 774 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLIN 833
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C + A+ + + M + +N+L+T + K+ E + EM ++
Sbjct: 834 GFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVG 893
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D++TYN + ++ A++V M D V D T++ L G EKA
Sbjct: 894 DAFTYNTLIHGYCQAGKLNVAQKVFNRMV-DCGVPPDIVTYNILLDCLCNNGKIEKALVM 952
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
+++L+ D+ Y +I + + E + ++RSL I+Y+ MI L
Sbjct: 953 VEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLC 1011
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 65/170 (38%), Gaps = 1/170 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY +L+N +CK E L ++M L + +N+L+ Y + G I
Sbjct: 310 NVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIF 369
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M + + PD T+ + + L +I A +M R G ++ + +
Sbjct: 370 SWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDM-RSGEKYLGIVAYNIMIHGLCK 428
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 291
A E+A L D Y +I + G E ++R ++
Sbjct: 429 ADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMK 478
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 60/310 (19%), Positives = 119/310 (38%), Gaps = 18/310 (5%)
Query: 157 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
S + F L+T A E + Q+M+ I D Y++ + + + +S A ++
Sbjct: 64 SVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSIL 123
Query: 217 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 276
+M + G TF +L + A + + ++ Y LI +
Sbjct: 124 GKMMKLG-YDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCK 182
Query: 277 TGNLSEVYRIWRSL----RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY 332
G+++ + + RLA ++Y ++ L + A + ++
Sbjct: 183 NGDVNIALELLNEMEKKGRLA---ADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINP 239
Query: 333 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 392
D+ +I A+ K+G L+ A+EL ++ + PN T+ + +G + A
Sbjct: 240 DVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHA---- 295
Query: 393 EKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDV-DGAEGFLEILKKA-VDDLGVEVFEP 450
+K D G P+ T T + F + + V DG + F + ++ V D +
Sbjct: 296 KKTFDLMASKG--CFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGD--TFTYNT 351
Query: 451 LIRTYAAAGR 460
LI Y G+
Sbjct: 352 LIHGYCQVGK 361
>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 123/269 (45%), Gaps = 1/269 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ +T+ SLL + + E A L M + + +N+L+ K G + I+
Sbjct: 295 DRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIM 354
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EM +I+P+ TY+ + A V + A + EMK G V D +++ L S+Y +
Sbjct: 355 SEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLG-VGLDRVSYNTLLSVYAK 413
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G FE+A KE+EN +D+ Y L+ YG+ EV R++ ++ + ++
Sbjct: 414 LGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLT 473
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I V A + F+E++ D+ + + +I A K G +E++ L +
Sbjct: 474 YSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMT 533
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
+ G PN T+ D + R+ + VD
Sbjct: 534 KEGIRPNVVTYNSIIDAFGRSASAQCVVD 562
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 103/211 (48%), Gaps = 3/211 (1%)
Query: 70 LYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYG 127
L+ A +L M +G+++ + LD V K +D A ++P + N +TY
Sbjct: 311 LWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYS 370
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 187
++++ Y K + A + +MK L +G + +N+L+++YAK G E+ + +EM+ +
Sbjct: 371 TMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENA 430
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
I D TYN + RV EEMKR GRV+ + T+S L +Y + GL+++
Sbjct: 431 GIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKR-GRVSPNLLTYSTLIDVYSKGGLYKE 489
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTG 278
A +E + D+ Y LI + G
Sbjct: 490 AMEVFREFKQAGLKADVVLYSALIDALCKNG 520
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 110/266 (41%), Gaps = 2/266 (0%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTG-HPEKIPAIIQEM 184
+ +L++ Y + +A + + MK L + + +N+++ K G +K+ I M
Sbjct: 228 FSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGM 287
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
++ + PD T+N + + A R+ M G + D T++ L + G
Sbjct: 288 LSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKG-IDQDIFTYNTLLDAVCKGGQ 346
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+ A + E+ +N ++ Y +I Y + G L + ++ ++ +SY
Sbjct: 347 MDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNT 406
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
++ V L A KE E+ D+ N ++ Y K+ R + + E +R
Sbjct: 407 LLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGR 466
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVD 390
PN T+ D Y + G K A++
Sbjct: 467 VSPNLLTYSTLIDVYSKGGLYKEAME 492
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 2/133 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL + + ME G+ K V L K D F ++ S N LTY +L++
Sbjct: 420 ALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLID 479
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
Y K + ++A + + K+ L + +++L+ K G E ++ EM I P
Sbjct: 480 VYSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMTKEGIRP 539
Query: 192 DSYTYNVWMRALA 204
+ TYN + A
Sbjct: 540 NVVTYNSIIDAFG 552
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 55/103 (53%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
K+ +TY +LL Y K+ ++ + E+MK + + + +++L+ +Y+K G ++ +
Sbjct: 434 KDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEV 493
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
+E K + + D Y+ + AL + + +++EM ++G
Sbjct: 494 FREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMTKEG 536
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 143/323 (44%), Gaps = 10/323 (3%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGID---AAENYFVDLPE-TSKNHLTYGSL 129
A+K+ E M+ G+ + +D K G+D AAE + L + +T+ SL
Sbjct: 239 AIKVFETMKSSGLKPNLVTYNAVIDACGK-GGVDFNRAAEIFDEMLRNGVQPDRITFNSL 297
Query: 130 LNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
L + + E A L +M + +N+L+ K G + I+ EM I
Sbjct: 298 LAVCGRGGLWEAARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHI 357
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
MP+ TY+ + A + A + EMK + D +++ L SIY + G FE+A
Sbjct: 358 MPNVVTYSTVIDGYAKAGRLDEALNLFNEMKF-ASIGLDRVSYNTLLSIYAKLGRFEEAL 416
Query: 250 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTANISYLNMIQ 307
KE+E+ +D Y L+ YG+ G EV R++ ++ FPN ++Y +I
Sbjct: 417 NVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNL--LTYSTLID 474
Query: 308 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
V A + F+E++ D+ + + +I A K G +E+A + + G P
Sbjct: 475 VYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRP 534
Query: 368 NAKTWEIFSDYYLRNGDMKLAVD 390
N T+ D + R+G + +D
Sbjct: 535 NVVTYNSIIDAFGRSGSAECVID 557
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 112/281 (39%), Gaps = 37/281 (13%)
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
E A+ + E G + F++L++ Y ++G+ ++ + + MK+S + P+ TYN
Sbjct: 201 VELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSGLKPNLVTYNA 260
Query: 199 WMRALAAVN-DISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 257
+ A D + A + +EM R+G V D TF++L ++ GL+E A E+
Sbjct: 261 VIDACGKGGVDFNRAAEIFDEMLRNG-VQPDRITFNSLLAVCGRGGLWEAARNLFSEMLY 319
Query: 258 RNAHRDLSAYQFL-----------------------------------ITLYGQTGNLSE 282
R +D+ Y L I Y + G L E
Sbjct: 320 RGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDE 379
Query: 283 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 342
++ ++ A +SY ++ + L A KE ES D N ++G
Sbjct: 380 ALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLG 439
Query: 343 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
Y K+G+ E + + E + PN T+ D Y + G
Sbjct: 440 GYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGG 480
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 143/298 (47%), Gaps = 8/298 (2%)
Query: 92 DQAIHLDLVA---KVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALL 146
D A++ L+A K+ IDAA N + E S + +TY SL+ C+ ++A L+
Sbjct: 126 DAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLM 185
Query: 147 EKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV 206
EKMKE L ++ +N+L+ K E++ +++EM + PD+++YN + L
Sbjct: 186 EKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCES 245
Query: 207 NDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSA 266
A +++E+M + + D T+++L + + ++AER L+++ R +
Sbjct: 246 GKYEEAGKILEKMI-EKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVIT 304
Query: 267 YQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW- 325
Y LI + + L++ YR+ + A + ++Y ++ L L A + +
Sbjct: 305 YTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMV 364
Query: 326 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
E CA D+ ++++ K G++++A L E RG PN T+ D + + G
Sbjct: 365 EKDCAP-DVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAG 421
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 118/270 (43%), Gaps = 7/270 (2%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
+ + + Y +LLN CK+ E+ LLE+M E + +N+++ ++G E+
Sbjct: 194 TPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGK 253
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I+++M PD TYN M V+ + AER++E+M R A T++ L +
Sbjct: 254 ILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGR-RCAPTVITYTTLIGGF 312
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNT 297
A A R ++++ DL Y L+ + G L E + + + + P+
Sbjct: 313 SRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDV 372
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
++Y ++ L L + A + E GC ++ N MI + K G+++ ++
Sbjct: 373 --VTYSILVNGLCKLGKVDDARLLLEMMLERGCQP-NLVTFNTMIDGFCKAGKVDEGHKV 429
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDMK 386
E + P+ T+ D Y + M+
Sbjct: 430 LELMKEVSCTPDVVTYSTLIDGYCKANRMQ 459
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 84/423 (19%), Positives = 161/423 (38%), Gaps = 44/423 (10%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCY 133
L+++ M R + V L ++ +D A ++F S TY L++
Sbjct: 43 VLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSHFRGKMWCSPTAFTYCILIHGL 102
Query: 134 CKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDS 193
C+ ++A LL++M + + + +N L+ K G + +++ M S +PD
Sbjct: 103 CQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDV 162
Query: 194 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVA--------------------------- 226
TY + N + A +++E+MK G
Sbjct: 163 ITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEE 222
Query: 227 -------ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGN 279
D +++ + + E+G +E+A + L+++ + D+ Y L+ + +
Sbjct: 223 MVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSK 282
Query: 280 LSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVT 337
+ E R+ + R P I+Y +I L A + ++ + D+
Sbjct: 283 MDEAERLLEDMVGRRCAPTV--ITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTY 340
Query: 338 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
N ++ K G+LE A EL E + P+ T+ I + + G + A LE ++
Sbjct: 341 NCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLE 400
Query: 398 TGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAA 457
G P+ T T + F + VD LE++K+ V + LI Y
Sbjct: 401 RG------CQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCK 454
Query: 458 AGR 460
A R
Sbjct: 455 ANR 457
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 139/336 (41%), Gaps = 44/336 (13%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A ++ E+M K G++ + LD + K ++ A + E + + +TY L+N
Sbjct: 321 AYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVN 380
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK + A LLE M E + + FN+++ + K G ++ +++ MK S P
Sbjct: 381 GLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTP 440
Query: 192 DSYTYNV-----------------------------WMRALAAVNDISGAERVIEEMKRD 222
D TY+ + L + + A+ V++ M +
Sbjct: 441 DVVTYSTLIDGYCKANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQ 500
Query: 223 GRVAADWTTFSNLASIYVEAGLFEKAERALKELE---NRNAHRDLSAYQFLITLYGQTGN 279
G T S+ A I E+ + ALK L+ R +L Y LI +T
Sbjct: 501 GC----PPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKR 556
Query: 280 LSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRV 336
+ + + + + P+ A +Y ++I + + A +CFK +SGC D
Sbjct: 557 VEDAINVLDVMLEKGCVPDVA--TYTSLIDGFCKINKMDAAYQCFKTMRDSGCEP-DKLA 613
Query: 337 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
N++I + + G +E A E+ + +G +P+A T+
Sbjct: 614 YNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATY 649
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 119/282 (42%), Gaps = 17/282 (6%)
Query: 157 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
S+ + +L+T +++ G+ + + I EM A PD T+N ++A + D+ +R +
Sbjct: 23 SNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDL---DRAL 79
Query: 217 EEMKRDGRVAADWTTFSNLASIY--VEAGLFEKAERALKELENRNAHRDLSAYQFLITLY 274
+ G++ T F+ I+ + ++A + L E+ ++ H D + Y LI
Sbjct: 80 SHFR--GKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGL 137
Query: 275 GQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY 332
+ G + + + + R P+ I+Y ++I L A K ++ + T
Sbjct: 138 CKMGKIDAARNVLKMMLERSCVPDV--ITYTSLIVGCCQTNALDEARKLMEKMKESGLTP 195
Query: 333 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 392
D N ++ K+ +LE +L E G +P+ ++ +G + A L
Sbjct: 196 DTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKIL 255
Query: 393 EKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 434
EK I+ G P T + M F + +D AE LE
Sbjct: 256 EKMIEKKCG------PDVVTYNSLMDGFCKVSKMDEAERLLE 291
>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Glycine max]
Length = 836
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 165/373 (44%), Gaps = 18/373 (4%)
Query: 61 TLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLV--AKVQGIDAAENYFVDLPE 118
+ +L +R + ALK+ + N VSD + +V K +G A + L
Sbjct: 436 VIHRLMERSGFVSALKIVTKLLSG--NIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAA 493
Query: 119 T---SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
+ N +T +LL+ C+ E+ +L++M E L + +N+L+ K G E
Sbjct: 494 VKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIE 553
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
+ + +EM PD+YTYN M+ LA + I R++ E K G V + T++ L
Sbjct: 554 EAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVY-TYALL 612
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLA 293
Y +A E A + K L+ Y LI Y + GN++E +++ ++ R
Sbjct: 613 LEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGI 672
Query: 294 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
P A +Y ++I + + + A++ F+E + ++ +IG + K G+++
Sbjct: 673 LPTCA--TYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIV 730
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETI 413
+ G PN T+ I D Y + G+MK A + L + I G P + T
Sbjct: 731 GSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNG------IAPDTVTY 784
Query: 414 RTFMRHFEQEKDV 426
+ + +E+++
Sbjct: 785 NALQKGYCKEREL 797
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 70/341 (20%), Positives = 137/341 (40%), Gaps = 10/341 (2%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TYG L++ K M E+A +L +M + + + FN+L+ Y + G + + E
Sbjct: 326 VTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDE 385
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + P+ T+N ++ N + AE+V+ + G ++ + S + +E
Sbjct: 386 MAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSG-LSVNMDVCSYVIHRLMERS 444
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
F A + + +L + N S L+ + SE +W L AN
Sbjct: 445 GFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTS 504
Query: 304 N-MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
N ++ L ++ + K+ D N +I K G++E A +LKE +
Sbjct: 505 NALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQ 564
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLA-VDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
+ P+ T+ +L G + +D + + + + G +VP+ T + +
Sbjct: 565 QEFQPDTYTYN-----FLMKGLADMGKIDDVHRLLHEAKEYG--FVPNVYTYALLLEGYC 617
Query: 422 QEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTS 462
+ ++ A F + L +L V+ LI Y G +
Sbjct: 618 KADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVT 658
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 112/286 (39%), Gaps = 20/286 (6%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
T+ + +N +CK A L KM+ L + + + +N+++ K+G E+
Sbjct: 256 FTFTTAINAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDR 315
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M S + P TY V + L + A V+ EM G A + F+ L Y G
Sbjct: 316 MVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMG-FAPNEVVFNALIDGYCRKG 374
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE-----VYRIWRSLRLAFPNTA 298
+A R E+ + + + L+ + ++ + + VY + L + N
Sbjct: 375 DMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSV---NMD 431
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV-----TNVMIGAYAKEGRLENA 353
SY+ I L+ A K + SG +IRV T +++G EG E
Sbjct: 432 VCSYV--IHRLMERSGFVSALKIVTKLLSG----NIRVSDSLLTPLVVGLCKCEGHSEAI 485
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
E + A +G N T G+M+ + L++ ++ G
Sbjct: 486 ELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKG 531
>gi|449479164|ref|XP_004155523.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 201
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 87/168 (51%), Gaps = 4/168 (2%)
Query: 271 ITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCA 330
+TLY GN EVYR+W +L N YL +I L+ L D+ GAE+ KEWESG
Sbjct: 1 MTLYAAIGNKDEVYRVW-NLYTNLQKRFNSGYLCIISSLMKLDDIDGAERILKEWESGDT 59
Query: 331 TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
++D ++ N+MI +Y +G ++ AE R G +P A W+ + Y NG A +
Sbjct: 60 SFDFKIPNMMINSYCTKGFVDKAEAYISRLIENGKEPRAYAWDRLASGYHSNGLTNKAAE 119
Query: 391 CLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 438
L+KAI +W P+ + + + + + +V+ AE + +L K
Sbjct: 120 TLKKAISVS---PPRWKPNYDILAACLEYLKTNGNVELAEEIIGLLCK 164
>gi|302805546|ref|XP_002984524.1| hypothetical protein SELMODRAFT_423640 [Selaginella moellendorffii]
gi|300147912|gb|EFJ14574.1| hypothetical protein SELMODRAFT_423640 [Selaginella moellendorffii]
Length = 547
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 109/445 (24%), Positives = 188/445 (42%), Gaps = 34/445 (7%)
Query: 64 KLRDRKLYYPALKLSENM--EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK 121
KLR RK ++ AL++S+ + +KR + + H+DLV++V + A F +LP K
Sbjct: 100 KLRRRKRFHHALRISDWIAYKKRVIPYDHKEALNHIDLVSRV-SVTRAREMFDNLPADWK 158
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ Y LL+ Y + M AE++ +K L S P N ++TLY K K+ +I
Sbjct: 159 SREGYTVLLSMYVRHSMAADAESIYTTLKRWGLR-SISPINMMLTLYQKHQVFWKVAELI 217
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
++ + + + ++N+ + ++ E ++E M + + D T+ LAS Y
Sbjct: 218 RDAEEAGQSLNMCSFNILLPMTFRAGGVAEMESLVEMM--ESKNFLDEHTYCMLASSYGR 275
Query: 242 AGLFEKAERAL----KELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
AG+ +KA+ L +E +R Y +I +YG G++ V RIW P
Sbjct: 276 AGMVDKAKEMLMVVEDGMETGKFNRLRRTYNVIIVIYGFIGDVEGVKRIWDITSRMDPTA 335
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
+ Y+ MI+ + AE F + + I V NVM+ + AE L
Sbjct: 336 ED--YICMIRSSAKVGLFEQAESGFLALAAQRKMH-ITVCNVMLQVCQAGNFVLRAESLL 392
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE-----------------KAIDT-G 399
+ + G P+ T+ +L+N +++ A+D + K + T
Sbjct: 393 RKIHQMGFKPDPATYHHLIAIHLKNDNIQRALDLFQLERQVFRVPFELSPQERKFMSTEP 452
Query: 400 RGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
R D WV T R M + +V E + V +F L+R Y A
Sbjct: 453 RKDIKPWVG---TCRMMMLALAERGEVVACETLFRNWRLEKWKTDVRLFNALLRAYEVAR 509
Query: 460 RTSPVMLRRLKMEKVEVSEASKKLL 484
+ RL+ + VE E + +L
Sbjct: 510 EPVAGFMERLEADGVEADEETIGIL 534
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 143/328 (43%), Gaps = 12/328 (3%)
Query: 107 DAAENYFVDLPET-SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLM 165
DA E +F L + N +T +L++ CK ++A LL+KM E + +N+L+
Sbjct: 474 DAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLI 533
Query: 166 TLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK-RDGR 224
+ K G E+ + EM I PD++TYN+ + + + + A + E K RD
Sbjct: 534 SGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRD-- 591
Query: 225 VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVY 284
+ + T+ + Y +A E+ E+ EL +N + Y LI Y + GN E +
Sbjct: 592 LVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAF 651
Query: 285 RIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAY 344
++ +R +Y ++I + N+ + A+ E ++ +IG Y
Sbjct: 652 KLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGY 711
Query: 345 AKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGG 404
K G+++ + + PN T+ + D Y ++GDMK A L + + G
Sbjct: 712 CKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKG----- 766
Query: 405 KWVPSSETIRTFMRHFEQEKDVDGAEGF 432
VP + T F +E ++ EGF
Sbjct: 767 -IVPDTVTYNVLTNGFCKEGKIE--EGF 791
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/301 (19%), Positives = 125/301 (41%), Gaps = 38/301 (12%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP--ETSKNHLTYGSLLN 131
KL M K+G+ + + + ++ +D A N + + + N TYG +++
Sbjct: 545 GFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMID 604
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
YCK E+ E L ++ NL +S+ +N+L+ Y + G+ + + +M++ I P
Sbjct: 605 GYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPP 664
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ TY+ + + + + A+ +I+EM+++G + + ++ L Y + G +K
Sbjct: 665 TTATYSSLIHGMCNIGRMEDAKCLIDEMRKEG-LLPNVVCYTALIGGYCKLGQMDKVVNV 723
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
L+E+ + + H + Y +I Y ++G
Sbjct: 724 LQEMSSYDIHPNKITYTVMIDGYSKSG--------------------------------- 750
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
D+ A K E D NV+ + KEG++E ++ + + G + T
Sbjct: 751 --DMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEIT 808
Query: 372 W 372
+
Sbjct: 809 Y 809
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 167/393 (42%), Gaps = 15/393 (3%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNH--LTYGSLLN 131
A++L +MEK G++ V + + K +D A + + + N +TY L+N
Sbjct: 265 AIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLIN 324
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
K +A ++L++ E + + +N+L+ Y K G+ I +M + I P
Sbjct: 325 GLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINP 384
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+S T N ++ + + AE ++EEM G + + F+ + FE A R
Sbjct: 385 NSVTLNSIIQGFCKIGQMEQAECILEEMLSRG-FSINPGAFTTIIHWLCMNSRFESALRF 443
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW-RSLRLAFPNTANISYLN-MIQVL 309
L+E+ RN + L+ + G S+ +W R L F AN+ N +I L
Sbjct: 444 LREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGF--GANLVTTNALIHGL 501
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
++ A + K+ D N +I KEG++E +L+ ++G +P+
Sbjct: 502 CKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDT 561
Query: 370 KTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF-EQEKDVDG 428
T+ + R G + AV+ + VP+ T + + + +K +G
Sbjct: 562 FTYNLLIHGMCRIGKLDEAVNLWNEC------KSRDLVPNVYTYGVMIDGYCKADKIEEG 615
Query: 429 AEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 461
+ F E+L + + +L V+ LIR Y G T
Sbjct: 616 EKLFTELLTQNL-ELNSVVYNTLIRAYCRNGNT 647
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 91/221 (41%), Gaps = 2/221 (0%)
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+ + + + P T + +L N++ + V E M++ V+ D FS +
Sbjct: 198 GVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQG--VSPDVYLFSTAINA 255
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
+ + G E A + ++E ++ Y LI + GNL E +R + N
Sbjct: 256 FCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNAT 315
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
I+Y +I L+ L+ A KE T + V N +I Y K G L +A ++
Sbjct: 316 LITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRG 375
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+G +PN+ T + + G M+ A LE+ + G
Sbjct: 376 DMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRG 416
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 77/168 (45%), Gaps = 9/168 (5%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK-----NHLTYGS 128
A KL ++M +G+ T A + L+ + I E+ + E K N + Y +
Sbjct: 650 AFKLHDDMRSKGIPPTT---ATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTA 706
Query: 129 LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS 188
L+ YCK +K +L++M ++ + + + ++ Y+K+G + ++ EM
Sbjct: 707 LIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKG 766
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLA 236
I+PD+ TYNV I ++ + M ++G + D T++ L
Sbjct: 767 IVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEG-LPLDEITYTTLV 813
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 109/309 (35%), Gaps = 71/309 (22%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
+ + +N +CK E A L M++L
Sbjct: 249 FSTAINAFCKGGKVEDAIQLFFDMEKL--------------------------------- 275
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
+ P+ TYN + L ++ A R E+M +DG V A T+S L + ++ F
Sbjct: 276 --GVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDG-VNATLITYSVLINGLMKLEKF 332
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
+A LKE + + Y LI Y + GNL + RI + N +++ ++
Sbjct: 333 NEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSI 392
Query: 306 IQVLVNLKDLPGAEKCFKEWES-------GCATYDIR----------------------- 335
IQ + + AE +E S G T I
Sbjct: 393 IQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNM 452
Query: 336 -----VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
+ ++G KEG+ +A EL R +G N T + G+M+ AV
Sbjct: 453 RPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVR 512
Query: 391 CLEKAIDTG 399
L+K ++ G
Sbjct: 513 LLKKMLERG 521
>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 125/271 (46%), Gaps = 5/271 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ +TY SLL + + E A L +M + + +N+L+ K G + I+
Sbjct: 292 DRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIM 351
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EM I+P+ TY+ A + A + EMK G + D +++ L SIY +
Sbjct: 352 LEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLG-IGLDRVSYNTLLSIYAK 410
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR--LAFPNTAN 299
G FE A + KE+ + +D+ Y L+ YG+ G +EV R+++ ++ FPN
Sbjct: 411 LGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNL-- 468
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
++Y +I V A + F+E++ D+ + + +I A K G +++A L +
Sbjct: 469 LTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDE 528
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
+ G PN T+ D + R+ + VD
Sbjct: 529 MTKEGIRPNVVTYNSIIDAFGRSTTAEFLVD 559
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 3/211 (1%)
Query: 70 LYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP--ETSKNHLTYG 127
L+ A L M RG+++ V LD V K +D A +++P + N +TY
Sbjct: 308 LWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYS 367
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 187
++ + Y K E A L +MK L +G + +N+L+++YAK G E + +EM +S
Sbjct: 368 TMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSS 427
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
+ D TYN + + RV +EMK+D RV + T+S L +Y + L+E+
Sbjct: 428 GVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKD-RVFPNLLTYSTLIDVYSKGSLYEE 486
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTG 278
A +E + D+ Y LI + G
Sbjct: 487 AMEVFREFKQAGLKADVVLYSELINALCKNG 517
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 106/277 (38%), Gaps = 37/277 (13%)
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
E A+ + E G + F++L++ Y K+G+ ++ + + MK S + P+ TYN
Sbjct: 203 VELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNA 262
Query: 199 WMRALAAVN-DISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 257
+ A + + EEM R+G V D T+++L ++ GL+E A E+ +
Sbjct: 263 VIDACGKGGVEFKRVVEIFEEMLRNG-VQPDRITYNSLLAVCSRGGLWEAARNLFNEMID 321
Query: 258 RNAHRDLSAYQFLITL-----------------------------------YGQTGNLSE 282
R +D+ Y L+ Y + G L +
Sbjct: 322 RGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLED 381
Query: 283 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 342
++ ++ +SY ++ + L A K KE S D+ N ++
Sbjct: 382 ALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLD 441
Query: 343 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 379
Y K+G+ + + ++ PN T+ D Y
Sbjct: 442 GYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVY 478
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 2/133 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
ALK+ + M G+ K V LD K + F ++ + N LTY +L++
Sbjct: 417 ALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLID 476
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
Y K + E+A + + K+ L + ++ L+ K G + ++ EM I P
Sbjct: 477 VYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRP 536
Query: 192 DSYTYNVWMRALA 204
+ TYN + A
Sbjct: 537 NVVTYNSIIDAFG 549
>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 125/271 (46%), Gaps = 5/271 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ +TY SLL + + E A L +M + + +N+L+ K G + I+
Sbjct: 292 DRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIM 351
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EM I+P+ TY+ A + A + EMK G + D +++ L SIY +
Sbjct: 352 LEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLG-IGLDRVSYNTLLSIYAK 410
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR--LAFPNTAN 299
G FE A + KE+ + +D+ Y L+ YG+ G +EV R+++ ++ FPN
Sbjct: 411 LGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNL-- 468
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
++Y +I V A + F+E++ D+ + + +I A K G +++A L +
Sbjct: 469 LTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDE 528
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
+ G PN T+ D + R+ + VD
Sbjct: 529 MTKEGIRPNVVTYNSIIDAFGRSTTAEFLVD 559
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 3/211 (1%)
Query: 70 LYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP--ETSKNHLTYG 127
L+ A L M RG+++ V LD V K +D A +++P + N +TY
Sbjct: 308 LWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYS 367
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 187
++ + Y K E A L +MK L +G + +N+L+++YAK G E + +EM +S
Sbjct: 368 TMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSS 427
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
+ D TYN + + RV +EMK+D RV + T+S L +Y + L+E+
Sbjct: 428 GVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKD-RVFPNLLTYSTLIDVYSKGSLYEE 486
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTG 278
A +E + D+ Y LI + G
Sbjct: 487 AMEVFREFKQAGLKADVVLYSELINALCKNG 517
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 106/277 (38%), Gaps = 37/277 (13%)
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
E A+ + E G + F++L++ Y K+G+ ++ + + MK S + P+ TYN
Sbjct: 203 VELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNA 262
Query: 199 WMRALAAVN-DISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 257
+ A + + EEM R+G V D T+++L ++ GL+E A E+ +
Sbjct: 263 VIDACGKGGVEFKRVVEIFEEMLRNG-VQPDRITYNSLLAVCSRGGLWEAARNLFNEMID 321
Query: 258 RNAHRDLSAYQFLITL-----------------------------------YGQTGNLSE 282
R +D+ Y L+ Y + G L +
Sbjct: 322 RGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLED 381
Query: 283 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 342
++ ++ +SY ++ + L A K KE S D+ N ++
Sbjct: 382 ALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLD 441
Query: 343 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 379
Y K+G+ + + ++ PN T+ D Y
Sbjct: 442 GYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVY 478
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 2/133 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
ALK+ + M G+ K V LD K + F ++ + N LTY +L++
Sbjct: 417 ALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLID 476
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
Y K + E+A + + K+ L + ++ L+ K G + ++ EM I P
Sbjct: 477 VYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRP 536
Query: 192 DSYTYNVWMRALA 204
+ TYN + A
Sbjct: 537 NVVTYNSIIDAFG 549
>gi|356540087|ref|XP_003538522.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Glycine max]
Length = 667
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 124/280 (44%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ C+ K + + + L++M++ N+ + +++L+ L K K +
Sbjct: 176 SPDRYTYSTLITCFGKHGLFDSSLFWLQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAIS 235
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +KAS+I PD YN + A +++EM RD V D ++S L +IY
Sbjct: 236 IFSRLKASTITPDLIAYNSMINVFGKAKLFREARLLLQEM-RDNAVQPDTVSYSTLLAIY 294
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
V+ F +A E+ DL+ +I +YGQ E R++ S+R
Sbjct: 295 VDNQKFVEALSLFSEMNEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNV 354
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
ISY +++V A F+ +S ++ N MI Y K E A L +
Sbjct: 355 ISYNTLLRVYGEADLFGEAIHLFRLMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQE 414
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+RG +PNA T+ + + G + A +K +G
Sbjct: 415 MNKRGIEPNAITYSTIISIWEKAGKLDRAAILFQKLRSSG 454
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 123/260 (47%), Gaps = 14/260 (5%)
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
+ +N +TY +++N Y K L EKA L+++M + + +++ ++++++++ K G ++
Sbjct: 384 DVQQNVVTYNTMINIYGKTLEHEKATNLIQEMNKRGIEPNAITYSTIISIWEKAGKLDRA 443
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
+ Q++++S + D Y + A ++ A+R++ E+KR + D +
Sbjct: 444 AILFQKLRSSGVRIDEVLYQTMIVAYERTGLVAHAKRLLHELKRPDNIPRD-----TAIA 498
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FP 295
I AG E+A ++ + +D+S + +I L+ + + V ++ +R FP
Sbjct: 499 ILARAGRIEEATWVFRQAFDAREVKDISVFGCMINLFSKNKKYANVVEVFEKMREVGYFP 558
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAE 354
++ I+ + + L++ A+ +++ E GC D V M+ Y E
Sbjct: 559 DSDVIALV--LNAFGKLREFDKADALYRQMHEEGCVFPD-EVHFQMLSLYGARKDFVMVE 615
Query: 355 ELKERARRRGADPNAKTWEI 374
L E+ ++PN E+
Sbjct: 616 SLFEKL---DSNPNINKKEL 632
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/392 (19%), Positives = 168/392 (42%), Gaps = 30/392 (7%)
Query: 11 KNIAKRSKKHLEEALYDRLFKKG-SSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRK 69
+N+ + + HL L+D + +KG S D ++ +
Sbjct: 152 RNVLRAKQWHLAHGLFDEMRQKGLSPD------------------RYTYSTLITCFGKHG 193
Query: 70 LYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYG 127
L+ +L + ME+ ++ + + +DL K+ A + F L + + + + Y
Sbjct: 194 LFDSSLFWLQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTITPDLIAYN 253
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 187
S++N + K + +A LL++M++ + ++ +++L+ +Y + ++ EM +
Sbjct: 254 SMINVFGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFSEMNEA 313
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
D T N+ + ++ A+R+ M++ G + + +++ L +Y EA LF +
Sbjct: 314 KCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMG-IQPNVISYNTLLRVYGEADLFGE 372
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNM 305
A + +++++ +++ Y +I +YG+T + + + + R PN I+Y +
Sbjct: 373 AIHLFRLMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMNKRGIEPNA--ITYSTI 430
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
I + L A F++ S D + MI AY + G + +A+ L +R
Sbjct: 431 ISIWEKAGKLDRAAILFQKLRSSGVRIDEVLYQTMIVAYERTGLVAHAKRLLHELKRPDN 490
Query: 366 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
P I + R G ++ A +A D
Sbjct: 491 IPRDTAIAILA----RAGRIEEATWVFRQAFD 518
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 88/224 (39%), Gaps = 36/224 (16%)
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
P + YNV +R + A + +EM++ G ++ D T+S L + + + GLF+ +
Sbjct: 142 PSLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKG-LSPDRYTYSTLITCFGKHGLFDSSLF 200
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR--------LAFPNTAN--- 299
L+++E N DL Y LI L + + S+ I+ L+ +A+ + N
Sbjct: 201 WLQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTITPDLIAYNSMINVFG 260
Query: 300 ------------------------ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 335
+SY ++ + V+ + A F E D+
Sbjct: 261 KAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFSEMNEAKCPLDLT 320
Query: 336 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 379
N+MI Y + + A+ L R+ G PN ++ Y
Sbjct: 321 TCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVISYNTLLRVY 364
>gi|302782563|ref|XP_002973055.1| hypothetical protein SELMODRAFT_413483 [Selaginella moellendorffii]
gi|300159656|gb|EFJ26276.1| hypothetical protein SELMODRAFT_413483 [Selaginella moellendorffii]
Length = 547
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 109/445 (24%), Positives = 188/445 (42%), Gaps = 34/445 (7%)
Query: 64 KLRDRKLYYPALKLSENM--EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK 121
KLR RK ++ AL++S+ + +KR + + H+DLV++V + A F +LP K
Sbjct: 100 KLRRRKRFHHALRISDWIAYKKRVIPYDHKEALNHIDLVSRV-SVTRAREMFDNLPADWK 158
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ Y LL+ Y + M AE++ +K L S P N ++TLY K K+ +I
Sbjct: 159 SREAYTVLLSMYVRHSMAADAESIYTTLKRWGLR-SISPINMMLTLYQKHQVFWKVAELI 217
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
++ + + + ++N+ + ++ E ++E M + + D T+ LAS Y
Sbjct: 218 RDAEEAGQSLNMCSFNILLPMTFRAGGVAEMESLVEMM--ESKNFLDEHTYCMLASSYGR 275
Query: 242 AGLFEKAERAL----KELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
AG+ +KA+ L +E +R Y +I +YG G++ V RIW P
Sbjct: 276 AGMVDKAKEMLMVVEDGMETGKFNRLRRTYNVIIVIYGFIGDVEGVKRIWDITSRMDPTA 335
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
+ Y+ MI+ + AE F + + I V NVM+ + AE L
Sbjct: 336 ED--YICMIRSSAKVGLFELAESGFLALAAQRKMH-ITVCNVMLQVCQAGNFVLRAESLL 392
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE-----------------KAIDT-G 399
+ + G P+ T+ +L+N +++ A+D + K + T
Sbjct: 393 RKIHQMGFKPDPATYHHLIAIHLKNDNIQRALDLFQLERQVFRVPFELSPQERKFMSTEP 452
Query: 400 RGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
R D WV T R M + +V E + V +F L+R Y A
Sbjct: 453 RKDIKPWVG---TCRMVMLALAERGEVVACETLFRNWRLEKWKTDVRLFNALLRAYEVAR 509
Query: 460 RTSPVMLRRLKMEKVEVSEASKKLL 484
+ RL+ + VE E + +L
Sbjct: 510 EPVAGFMERLEADGVEADEETIAIL 534
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 152/344 (44%), Gaps = 19/344 (5%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N TY +L+ CK EKA+ALL +M + + + +N+++ Y K + ++ ++
Sbjct: 375 NLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLL 434
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EMK S+++P +YT + + L I A RV E M G V + ++ L +V+
Sbjct: 435 SEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLG-VKPNAVIYTTLIKGHVQ 493
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE-----VYRIWRSLRLAFPN 296
G F++A R LK ++ + D+ Y +I ++ + E V I R L+ PN
Sbjct: 494 EGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLK---PN 550
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEE 355
+Y +I ++ A++ FKE G A D+ V +I Y KEG A
Sbjct: 551 V--YTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDV-VCTALIDGYCKEGSTTEATS 607
Query: 356 LKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRT 415
+ R P+ +T+ LRNG ++ A++ L + ++ G VP T +
Sbjct: 608 IFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKG------LVPDVFTYNS 661
Query: 416 FMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
+ F ++ + A E + + + + LI AG
Sbjct: 662 IISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAG 705
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/355 (20%), Positives = 146/355 (41%), Gaps = 39/355 (10%)
Query: 71 YYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGS 128
+ A+++ + M+K+G+ V + + K + ++ A++Y V++ E N TYG+
Sbjct: 497 FQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGA 556
Query: 129 LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS 188
L++ YCK + A+ ++M + + + +L+ Y K G + +I + M S
Sbjct: 557 LIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRS 616
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWT------------------ 230
+ PD TY+ + L + GA ++ E G V +T
Sbjct: 617 VHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAF 676
Query: 231 ----------------TFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLY 274
T++ L + +AG E+A + + + Y +I Y
Sbjct: 677 QLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGY 736
Query: 275 GQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE-WESGCATYD 333
++GNLS+ +R++ + L + Y +I + A F E + G A+
Sbjct: 737 CKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFAS-- 794
Query: 334 IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 388
N ++ + K G++ A +L E + P+ T+ I DY+ + G +K A
Sbjct: 795 TSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEA 849
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/363 (19%), Positives = 148/363 (40%), Gaps = 10/363 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A +L E M ++G++ + ++ + K I+ A F +P + N +TY ++++
Sbjct: 675 AFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIID 734
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
YCK KA L ++M + S +++L+ K G+ EK ++ E
Sbjct: 735 GYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFAS 794
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
S + N M + A +++E+M D V D T++ L + + G ++AE+
Sbjct: 795 TS-SLNALMDGFCKSGKVIEANQLLEDM-VDKHVKPDHVTYTILIDYHCKTGFLKEAEQF 852
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
+++ RN + Y L++ Y G SE++ ++ + +++ MI +
Sbjct: 853 FVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLK 912
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
D K + V +V+I ++ + ++ E+ +G + + T
Sbjct: 913 EGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLAT 972
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG 431
+ + G M A L+ + KWVP S + + + D + A
Sbjct: 973 CSTLVRCFHKAGKMDGAARVLKSMVRF------KWVPDSTELNDLINVEQDSTDSENAGD 1026
Query: 432 FLE 434
FL+
Sbjct: 1027 FLK 1029
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 121/267 (45%), Gaps = 20/267 (7%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL L ++G T S A+ +D K + A D+ + +H+TY L++
Sbjct: 780 ALSLFLESVQKGFASTSSLNAL-MDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILID 838
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+CK ++AE M++ NL +++ + +L++ Y G ++ A+ EM A I P
Sbjct: 839 YHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEP 898
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYVEAGLFEKAE- 249
D T++V + A D +++++M K+ G V+ N+ + ++ L K
Sbjct: 899 DGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVS------KNVCHVLIDP-LCRKEHV 951
Query: 250 ----RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN- 304
+ L+++E + + L+ L+ + + G + R+ +S+ + F + + LN
Sbjct: 952 SEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSM-VRFKWVPDSTELND 1010
Query: 305 MIQVLVNLKDLPGAEKCFKE--WESGC 329
+I V + D A K+ WE C
Sbjct: 1011 LINVEQDSTDSENAGDFLKQMAWEVAC 1037
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/290 (20%), Positives = 116/290 (40%), Gaps = 7/290 (2%)
Query: 149 MKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVND 208
M E N+ + L+ + + G+ ++ ++ EM+ P TYNV + L +
Sbjct: 227 MLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGE 286
Query: 209 ISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQ 268
+ A + + M + G V AD T+S L + + +A+ L+E+ ++ AY
Sbjct: 287 VDEAFELKKLMDKKGLV-ADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYT 345
Query: 269 FLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESG 328
LI + + G+ E +R+ + +Y +++ + D+ A+ E
Sbjct: 346 ALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMV 405
Query: 329 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 388
D + N MI Y KE ++L ++ P A T + + R+G ++ A
Sbjct: 406 GIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDA 465
Query: 389 VDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 438
E + G P++ T ++ QE A L+++ K
Sbjct: 466 SRVFEIMVSLGVK------PNAVIYTTLIKGHVQEGRFQEAVRILKVMDK 509
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 74/377 (19%), Positives = 144/377 (38%), Gaps = 55/377 (14%)
Query: 119 TSKNHLTYGSLLNCYC-----------KELMTEK------------------------AE 143
S + +TY ++ C K+LM +K A+
Sbjct: 267 CSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAK 326
Query: 144 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 203
+LE+M L + + +L+ + + G + + +EM A + + +TYN ++ +
Sbjct: 327 LMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGV 386
Query: 204 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 263
D+ A+ ++ EM G + D T++N+ Y++ + + L E++ N
Sbjct: 387 CKFGDMEKADALLNEMIMVG-IKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPT 445
Query: 264 LSAYQFLI---TLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 320
+I +G + S V+ I SL + PN + Y +I+ V A +
Sbjct: 446 AYTCGMIINGLCRHGSIEDASRVFEIMVSLGVK-PNA--VIYTTLIKGHVQEGRFQEAVR 502
Query: 321 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 380
K + D+ N +I K ++E A++ RG PN T+ Y
Sbjct: 503 ILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYC 562
Query: 381 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 440
++G+M++A ++ + G P+ + + +E A +
Sbjct: 563 KSGEMQVADRYFKEMLGCG------IAPNDVVCTALIDGYCKEGSTTEATSIFRCM---- 612
Query: 441 DDLGVEVFEPLIRTYAA 457
LG V P +RTY+A
Sbjct: 613 --LGRSV-HPDVRTYSA 626
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/269 (17%), Positives = 111/269 (41%), Gaps = 1/269 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY L+N + + ++ + LL +M+E S + +N ++ + G ++ + + M
Sbjct: 238 TYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLM 297
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
++ D +TY++ + + A+ ++EEM G + ++ L ++ G
Sbjct: 298 DKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKG-LKPGHVAYTALIDGFMRQGD 356
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+A R +E+ R +L Y L+ + G++ + + + + +Y N
Sbjct: 357 SGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNN 416
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
MI+ + ++ + E + ++I + G +E+A + E G
Sbjct: 417 MIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLG 476
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
PNA + +++ G + AV L+
Sbjct: 477 VKPNAVIYTTLIKGHVQEGRFQEAVRILK 505
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 52/281 (18%), Positives = 111/281 (39%), Gaps = 15/281 (5%)
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M ++++ D YTY + A + +R++ EM+ G + T++ + AG
Sbjct: 227 MLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKG-CSPSLVTYNVVIGGLCRAG 285
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
++A K ++ + D+ Y LI +G+ +E + + +++Y
Sbjct: 286 EVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYT 345
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I + D A + +E + ++ N ++ K G +E A+ L
Sbjct: 346 ALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMV 405
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQE 423
G P+ +T+ + YL+ + D L + + VP++ T + +
Sbjct: 406 GIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKS------NLVPTAYTCGMIINGLCRH 459
Query: 424 KDVDGAEGFLEILKKAVDDLGVE----VFEPLIRTYAAAGR 460
++ A EI+ LGV+ ++ LI+ + GR
Sbjct: 460 GSIEDASRVFEIMV----SLGVKPNAVIYTTLIKGHVQEGR 496
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 138/317 (43%), Gaps = 15/317 (4%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL--PETSKNHLTYGSLLN 131
ALK+ E M KRG +V ++ + + +D A + F ++ + + + L Y SL+N
Sbjct: 455 ALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVN 514
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPF----NSLMTLYAKTGHPEKIPAIIQEMKAS 187
YCK T++A+ +++ G P+ N+LM Y K G ++IP + ++M
Sbjct: 515 GYCKSSRTKEAQKVVD-------GIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACR 567
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
+P+ TYN+ M L + A +E M G V D +++ + +A ++
Sbjct: 568 GCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCV-PDVVSYNIIIDGLFKASKPKE 626
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 307
A + L ++ D Y L+ + + + I +++ A + N++Y +I
Sbjct: 627 ARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLIS 686
Query: 308 VLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD 366
L L A + E +GC N +I KEG L+ A L + G +
Sbjct: 687 GLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVE 746
Query: 367 PNAKTWEIFSDYYLRNG 383
N T+ IF D + G
Sbjct: 747 ANTVTYNIFIDRLCKEG 763
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 100/450 (22%), Positives = 169/450 (37%), Gaps = 64/450 (14%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL+ + M +R + V I +D + K D A ++ + + + +T+ S+++
Sbjct: 245 ALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMD 304
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK E+A +LL M E N S +N+L++ K + ++ ++ E +S +P
Sbjct: 305 GLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVP 364
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D TY++ L I A +++EM G + T++ L +A EKA
Sbjct: 365 DVVTYSILADGLCKRGRIDEAFELVKEMSGKG-CTPNLVTYNTLIDGLCKASKTEKAYEL 423
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
L+ L + D+ Y ++ + G L + ++ + + I+Y +++ L
Sbjct: 424 LESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCR 483
Query: 312 LKDLPGAEKCFKEWESGCATYD--------------------------------IRVTNV 339
+ A FKE S T D I V N
Sbjct: 484 TGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNA 543
Query: 340 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
++ Y KEGRL+ + E RG PN KT+ I D ++G + A LE G
Sbjct: 544 LMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAG 603
Query: 400 RG----------DG-------------------GKWVPSSETIRTFMRHFEQEKDVDGAE 430
DG P + T T M F +E+ D A
Sbjct: 604 CVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAV 663
Query: 431 GFLEILKKAVDDLGVEVFEPLIRTYAAAGR 460
G L+ + KA D + LI + R
Sbjct: 664 GILKNMIKAGVDPDNVTYNTLISGLSQTNR 693
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 127/301 (42%), Gaps = 10/301 (3%)
Query: 79 ENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKE 136
E+M RG + I +D + K +D A + + + ++Y +++ K
Sbjct: 562 EDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKA 621
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 196
++A +L++M + + ++ +N+LM + K + I++ M + + PD+ TY
Sbjct: 622 SKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTY 681
Query: 197 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 256
N + L+ N + A ++ EM R+G V + TT++ + + G ++A + +
Sbjct: 682 NTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMT 741
Query: 257 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 316
+ Y I + G L E + + +SY +I L + L
Sbjct: 742 GHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTL---RDEVSYTTVIIGLCKAEQLD 798
Query: 317 GAEKCFKEW---ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 373
A K +E + C T N++I A+ K RL+ A L +RG P+ T+
Sbjct: 799 RASKLAREMVAVKGLCITS--HTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYN 856
Query: 374 I 374
+
Sbjct: 857 M 857
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 116/304 (38%), Gaps = 55/304 (18%)
Query: 155 GFSSMPF--NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA 212
GF F N + + G ++IPA+ + M + PDSYTY++ +++L +N I
Sbjct: 120 GFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQI--- 176
Query: 213 ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLIT 272
+KA L + + R ++S Y L
Sbjct: 177 ---------------------------------DKAFTMLDKAKVRGFKPEVSVYTILTR 203
Query: 273 LYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY 332
+ +TG L + I+R++ P+ I+Y +I D GA + KE
Sbjct: 204 AFCKTGRLKDALEIFRNI----PSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAP 259
Query: 333 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 392
D+ N++I K + + A E+ RG P+ T+ D + G + A L
Sbjct: 260 DVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLL 319
Query: 393 EKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLI 452
A+ R PS T T + ++++VD A K VD+ F P +
Sbjct: 320 --AVMAER----NCRPSCCTYNTLISGLCKQQNVDRA-------KDLVDEFVSSGFVPDV 366
Query: 453 RTYA 456
TY+
Sbjct: 367 VTYS 370
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 111/252 (44%), Gaps = 13/252 (5%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCY 133
AL L ++M G+ I +D + K +D A + ++ +T ++ ++Y +++
Sbjct: 733 ALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM-DTLRDEVSYTTVIIGL 791
Query: 134 CKELMTEKAEALLEKMKEL-NLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPD 192
CK ++A L +M + L +S FN L+ + KT ++ ++ M P
Sbjct: 792 CKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPS 851
Query: 193 SYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERAL 252
TYN+ + L ++ + A + +EM G VA+ +++ L G ++A + L
Sbjct: 852 VITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASS-VSYTVLIYGLCGQGRGKEALQVL 910
Query: 253 KELENRNAH------RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI 306
+E+ + + D++ + T +G S + + S + P N ++ +
Sbjct: 911 EEMASSDCEIDDLKWEDVAPHSQFQTTFGPC--YSSFHSRFSSTWCSVPYETNKAHKEFV 968
Query: 307 QVLVNL--KDLP 316
L +L K++P
Sbjct: 969 SGLASLCNKEIP 980
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 137/309 (44%), Gaps = 7/309 (2%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY +++ CK++ + A LL +MK+ N+ + +NSL+ K G EK+ ++ EM
Sbjct: 205 TYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEM 264
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+I P+ +T+++ + L + A+ V+ M G V D T+S + Y G
Sbjct: 265 VNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKG-VEPDIITYSAIMDGYCLRGQ 323
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
++A R L ++ ++ +Y LI Y + NL++ +++ + ++Y
Sbjct: 324 VDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYST 383
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
++ L+ + + A+K F E T DI + + ++ Y K G +E A L + R
Sbjct: 384 ILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNR 443
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 424
D N + + + +N ++ A EK G +P T + F +E
Sbjct: 444 EDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIG------LIPDVRTYNVMITGFCREG 497
Query: 425 DVDGAEGFL 433
D +G L
Sbjct: 498 LFDEVKGIL 506
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/380 (21%), Positives = 142/380 (37%), Gaps = 40/380 (10%)
Query: 59 GDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE 118
G + L R L L ME+ V +I +D + K +DAA N ++ +
Sbjct: 172 GTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQ 231
Query: 119 --TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK 176
N TY SL++ CK EK + LL +M LN+ + F+ L+ K G E
Sbjct: 232 KNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVED 291
Query: 177 IPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG------------- 223
+++ M + PD TY+ M + A RV ++ G
Sbjct: 292 ADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILIN 351
Query: 224 ---------------------RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 262
+ D T+S + +E G A++ E+
Sbjct: 352 GYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTP 411
Query: 263 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS-YLNMIQVLVNLKDLPGAEKC 321
D+ + L+ Y + G + E ++ L +T NIS Y +I L + A
Sbjct: 412 DICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDT-NISFYTVVINGLCKNDRVREAHAI 470
Query: 322 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 381
F++ S D+R NVMI + +EG + + + + G N T+ + + R
Sbjct: 471 FEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFR 530
Query: 382 NGDMKLAVDCLEKAIDTGRG 401
+ + V +++ GRG
Sbjct: 531 SNKISEIVSFMKEM--AGRG 548
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 112/252 (44%), Gaps = 2/252 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKM-KELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
N +T+ +LL E A L +K+ +E + + + ++M +K GH EK ++
Sbjct: 131 NVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSL 190
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
++ M+ + PD TY++ + AL ++ A ++ EMK+ + + T+++L
Sbjct: 191 LRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQK-NIPPNIFTYNSLIDGLC 249
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
+ G +EK + L E+ N N + ++ + LI + G + + + R + I
Sbjct: 250 KLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDII 309
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
+Y ++ + A + F +I +++I Y K+ L A +L
Sbjct: 310 TYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEI 369
Query: 361 RRRGADPNAKTW 372
++G P+ T+
Sbjct: 370 SQKGLKPDTVTY 381
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y ++N CK +A A+ EK+ + L +N ++T + + G +++ I+++M+
Sbjct: 451 YTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKME 510
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+ ++ TYNV M+ N IS ++EM G + D TT L ++ E
Sbjct: 511 DNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRG-FSFDATTTGVLINVLKE 565
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 155/357 (43%), Gaps = 21/357 (5%)
Query: 76 KLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK---NHLTYGSLLNC 132
++ + M ++G+ +V +D K ++AA+ +DL ++ N TY L+
Sbjct: 130 RILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQE-ILDLMHSNSCNPNERTYNELICG 188
Query: 133 YCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPD 192
+C++ +A ALL KM E L S + +NSL+ K G+ + ++ M + ++PD
Sbjct: 189 FCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPD 248
Query: 193 SYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERAL 252
+TY+V++ L I A + +K G + A+ ++ L Y +AG + A L
Sbjct: 249 QWTYSVFIDTLCKKGRIEEANVLFNSLKEKG-IKANEVIYTALIDGYCKAGKMDDANSLL 307
Query: 253 KELENRNAHRDLSAYQFLITLYGQTGNLSEVY-----RIWRSLRLAFPNTANISYLNMIQ 307
+ + + S Y LI + + E I + L+ P +Y +I
Sbjct: 308 DRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVP-----TYTILIV 362
Query: 308 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
++ D A + + S D+ + I A+ G ++ AE++ RG P
Sbjct: 363 AMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMP 422
Query: 368 NAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 424
+A T+ + D Y G + A D L++ DTG PS T ++H +E+
Sbjct: 423 DALTYTLVIDAYGGLGLLNPAFDVLKRMFDTG------CDPSHHTYSCLIKHLLKEE 473
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 109/257 (42%), Gaps = 11/257 (4%)
Query: 116 LPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
LP +S TY +L++ CKE ++A L+E M + L + + L+ K G +
Sbjct: 316 LPNSS----TYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFD 371
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
I+ +M +S PD Y Y ++ A +I AE ++ M G V D T++ +
Sbjct: 372 YAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERG-VMPDALTYTLV 430
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
Y GL A LK + + Y LI + E+ + ++++ L
Sbjct: 431 IDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLK----EELTKKYKNVALC-D 485
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEE 355
+ N+ + ++ V +K E K E GC+ +I +I K GRL A++
Sbjct: 486 SIPNVFFADVADVWKMMKFETALELFEKMLEHGCSP-NINTYAKLIIGLCKVGRLGVAQK 544
Query: 356 LKERARRRGADPNAKTW 372
L + RG P+ +
Sbjct: 545 LFDHMNERGVSPSEAIY 561
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 57/290 (19%), Positives = 113/290 (38%), Gaps = 20/290 (6%)
Query: 207 NDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSA 266
ND++ A V M + G + +++NL E G ++ K++ + + +
Sbjct: 18 NDVNSAFSVFNMMPKKG-CRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRT 76
Query: 267 YQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 324
Y ++ ++G E ++ + R PN +Y MI + L + E
Sbjct: 77 YTVIVHALFESGRRMEAINLFSEMRERGCEPNIH--TYTVMINAMCKETKLEEGRRILDE 134
Query: 325 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 384
+ N +I Y KEG +E A+E+ + +PN +T+ + R +
Sbjct: 135 MVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKN 194
Query: 385 MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK---AVD 441
+ A+ L K +++ + PS T + + + +D A L ++ + D
Sbjct: 195 VHRAMALLSKMLES------RLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPD 248
Query: 442 DLGVEVFEPLIRTYAAAGRT--SPVMLRRLKMEKVEVSEA-SKKLLEAIC 488
VF I T GR + V+ LK + ++ +E L++ C
Sbjct: 249 QWTYSVF---IDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYC 295
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 59/309 (19%), Positives = 113/309 (36%), Gaps = 42/309 (13%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL-------AAVNDIS--- 210
+ +L+ + G ++ I ++M+ P TY V + AL A+N S
Sbjct: 42 YTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMR 101
Query: 211 --GAE-----------------------RVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
G E R+++EM G V + T++ L Y + G+
Sbjct: 102 ERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPS-VPTYNALIDGYCKEGMV 160
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
E A+ L + + + + + Y LI + + N+ + + + + ++Y ++
Sbjct: 161 EAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSL 220
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
I + L A + D +V I K+GR+E A L + +G
Sbjct: 221 IHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGI 280
Query: 366 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKD 425
N + D Y + G M A L++ + +P+S T + +E+
Sbjct: 281 KANEVIYTALIDGYCKAGKMDDANSLLDRMLTE------DCLPNSSTYNALIDGLCKERK 334
Query: 426 VDGAEGFLE 434
V A +E
Sbjct: 335 VQEALLLME 343
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 129/292 (44%), Gaps = 5/292 (1%)
Query: 106 IDAAENYF--VDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNS 163
+D+A F + + + + TYG L+N K ++A + + M E L + +N
Sbjct: 116 LDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNL 175
Query: 164 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
LM + K G + + EMK P TYN+ + AL + + A ++ +M DG
Sbjct: 176 LMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDG 235
Query: 224 RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 283
+ D T+S L + ++G E+A + +E+ +R DL Y L+ + GN+ V
Sbjct: 236 -CSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRV 294
Query: 284 YRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIG 342
+++ + + + S+ ++ L A + F ESGC D+ N++I
Sbjct: 295 WKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKP-DLISYNILID 353
Query: 343 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
+YA+ G A ++ E G P KT+ + +G + A LE+
Sbjct: 354 SYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEE 405
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 129/316 (40%), Gaps = 3/316 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL L M++RG +V I LD + + AA F + S + TY +L+N
Sbjct: 189 ALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVN 248
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
K E+A + +M + + + +NSL+ AK G+ +++ +++EM P
Sbjct: 249 GLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHP 308
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D++++N M AL N A V M G D +++ L Y G +A +
Sbjct: 309 DAFSFNTIMDALGKANKPDAAREVFARMVESG-CKPDLISYNILIDSYARFGDAAQARQM 367
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
L+E+ + Y LI G + E + + + A ++Y ++ +L
Sbjct: 368 LEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGK 427
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+ A + F++ + D V I A + RL+ A L + + G +
Sbjct: 428 RGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAM 487
Query: 372 WEIFSDYYLRNGDMKL 387
+ I R GD +L
Sbjct: 488 YRILIRAAHRAGDTEL 503
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 124/318 (38%), Gaps = 7/318 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ Y L+ + + + A + +MK + L+ K G ++ +
Sbjct: 99 DRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFF 158
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M + P+ TYN+ M A V + A + EMKR G T++ L
Sbjct: 159 DAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRG-FQPSVVTYNILLDALCS 217
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
AG A + ++ D Y L+ G++G + E ++++R + ++
Sbjct: 218 AGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVN 277
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +++ L ++ K KE D N ++ A K + + A E+ R
Sbjct: 278 YNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMV 337
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
G P+ ++ I D Y R GD A LE+ ++ G ++P ++T + +
Sbjct: 338 ESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAG------FIPETKTYNSLIHWLA 391
Query: 422 QEKDVDGAEGFLEILKKA 439
+ VD A LE ++ A
Sbjct: 392 TDGQVDEAFAVLEEMETA 409
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 100/237 (42%), Gaps = 14/237 (5%)
Query: 232 FSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 291
F+ L I V +G FE+AE K+L + D AY LI +G++G L ++R ++
Sbjct: 68 FTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMK 127
Query: 292 LAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLE 351
+ +Y ++ L + A F T +I N+++ A+ K G+L+
Sbjct: 128 IKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLD 187
Query: 352 NAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSE 411
A L +RRG P+ T+ I D G + A K GDG P S
Sbjct: 188 MALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMT----GDG--CSPDSY 241
Query: 412 TIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEV----FEPLIRTYAAAGRTSPV 464
T T + + V+ A ++ ++ VD GV V + L+ T A AG V
Sbjct: 242 TYSTLVNGLGKSGRVEEAH---KVFREMVDR-GVAVDLVNYNSLLATLAKAGNMDRV 294
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 95/222 (42%), Gaps = 10/222 (4%)
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI-S 301
G+ + E LKE+ + LIT YG+ + + ++ +F + + +
Sbjct: 9 GILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAE-SFACSPTVHA 67
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
+ +I +LVN + AE +K+ + GC D NV+I + + G+L++A E+
Sbjct: 68 FTKLIDILVNSGEFERAELVYKKLVQKGC-QLDRFAYNVLIRYFGRSGQLDSAMEMFREM 126
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 420
+ +G++P+ T+ + + G ++ A + ++ G P+ T M F
Sbjct: 127 KIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERG------LTPNIPTYNLLMDAF 180
Query: 421 EQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTS 462
+ +D A G +K+ V + L+ +AGR
Sbjct: 181 RKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVG 222
>gi|414883717|tpg|DAA59731.1| TPA: hypothetical protein ZEAMMB73_675213 [Zea mays]
Length = 453
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/80 (61%), Positives = 60/80 (75%)
Query: 77 LSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKE 136
LSE M + MN TVSDQAI LDL+AK + + AA+ YF+DLPETSK + Y +LLN Y K
Sbjct: 131 LSEVMVRSDMNPTVSDQAILLDLIAKSRCVAAAKKYFLDLPETSKTYFRYHALLNSYSKV 190
Query: 137 LMTEKAEALLEKMKELNLGF 156
LM EKAE+L+EKM+ELN F
Sbjct: 191 LMIEKAESLVEKMEELNFPF 210
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 132/295 (44%), Gaps = 6/295 (2%)
Query: 107 DAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSL 164
D E F ++ E + N +T+ L+ +C+ M E+A +LE+M E ++ N +
Sbjct: 265 DDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIV 324
Query: 165 MTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGR 224
+ K G + ++ +M + PD+ +Y ++ L A+ ++ EM R+
Sbjct: 325 INSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRN-N 383
Query: 225 VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVY 284
+ TF+ I + GL E+A ++++ + Y L+ + G++
Sbjct: 384 CPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSAL 443
Query: 285 RIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAY 344
++RS+ PNT I+Y ++ L N + L GA + E G ++ NV++ +
Sbjct: 444 ELFRSMPCK-PNT--ITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFF 500
Query: 345 AKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
++G LE A EL E+ G PN T+ D ++ + A++ L + G
Sbjct: 501 CQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKG 555
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/328 (19%), Positives = 130/328 (39%), Gaps = 6/328 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP--ETSKNHLTYGSLLN 131
A KL +M G N L + + + D A+ ++ N +T+ + +
Sbjct: 337 AFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFIC 396
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C++ + E+A L+E+M E + +N+L+ + GH I + ++ ++ P
Sbjct: 397 ILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGH---IDSALELFRSMPCKP 453
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
++ TY + L + GA ++ EM R G + TF+ L S + + G E+A
Sbjct: 454 NTITYTTLLTGLCNAERLDGAAELVAEMLR-GDCPPNVVTFNVLVSFFCQKGFLEEAIEL 512
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
++++ +L Y L+ + + + + L + I++ ++I +L
Sbjct: 513 VEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSK 572
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+ A + F + V N ++ K ++NA + G PN T
Sbjct: 573 EDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNEST 632
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ I + G +K A D L G
Sbjct: 633 YIILIEGLAHEGLLKEAQDLLSVLCSRG 660
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/376 (18%), Positives = 145/376 (38%), Gaps = 43/376 (11%)
Query: 62 LKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL--PET 119
++ L DR AL L ++M +RG V + L+ + + G + A ++
Sbjct: 150 IRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGC 209
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
+ N +TY ++N C+E + A LL ++ ++ + +L+ + + +
Sbjct: 210 TPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEE 269
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLA--S 237
+ EM + MP+ T+++ +R + A +V+E+M G A TT N+ S
Sbjct: 270 LFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHG--CATNTTLCNIVINS 327
Query: 238 IY-----------------------------VEAGL-----FEKAERALKELENRNAHRD 263
I V GL ++ A+ L E+ N +
Sbjct: 328 ICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPN 387
Query: 264 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 323
+ I + Q G + + + + ++Y ++ + A + F+
Sbjct: 388 EVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFR 447
Query: 324 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
C I T ++ G E RL+ A EL R PN T+ + ++ + G
Sbjct: 448 SMP--CKPNTITYTTLLTGLCNAE-RLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKG 504
Query: 384 DMKLAVDCLEKAIDTG 399
++ A++ +E+ ++ G
Sbjct: 505 FLEEAIELVEQMMEHG 520
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/336 (19%), Positives = 126/336 (37%), Gaps = 47/336 (13%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
+N+L+ Y + GH + +I M + PD+YTY +R L ++ A ++++M
Sbjct: 114 YNTLVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDML 170
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
R G + T++ L FE+A L E+ + ++ Y +I + G +
Sbjct: 171 RRG-CQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRV 229
Query: 281 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW--------------- 325
+ + L +SY +++ L K E+ F E
Sbjct: 230 DDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDML 289
Query: 326 ---------------------ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
E GCAT + + N++I + K+GR+++A +L G
Sbjct: 290 IRFFCRGGMVERAIQVLEQMTEHGCAT-NTTLCNIVINSICKQGRVDDAFKLLNDMGSYG 348
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 424
+P+ ++ R A + L + + P+ T TF+ Q+
Sbjct: 349 CNPDTISYTTVLKGLCRAERWDDAKELLNEMVRN------NCPPNEVTFNTFICILCQKG 402
Query: 425 DVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 460
++ A +E + + +GV + L+ + G
Sbjct: 403 LIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGH 438
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 111/263 (42%), Gaps = 15/263 (5%)
Query: 200 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 259
+R L A D++GA R++E A D + L G A R L+ E
Sbjct: 47 LRRLIAREDLAGAVRLVERSGSCDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSG 106
Query: 260 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 319
+ D+ AY L+ Y + G+L R+ S+ +A P+ +Y +I+VL + + A
Sbjct: 107 SPVDVFAYNTLVAGYCRYGHLDAARRLIGSMPVA-PDA--YTYTPLIRVLCDRGRVADAL 163
Query: 320 KCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 378
+ GC + T V++ A + E A + + R +G PN T+ + +
Sbjct: 164 SLLDDMLRRGCQPNVVTYT-VLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIING 222
Query: 379 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG-FLEILK 437
R G + A + L + G + P + + T ++ K D E F E+++
Sbjct: 223 MCREGRVDDARELLNRLPSYG------FQPDTVSYTTLLKGLCASKRWDDVEELFAEMME 276
Query: 438 KAVDDLGVEV-FEPLIRTYAAAG 459
K + + EV F+ LIR + G
Sbjct: 277 K--NCMPNEVTFDMLIRFFCRGG 297
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 138/317 (43%), Gaps = 15/317 (4%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL--PETSKNHLTYGSLLN 131
ALK+ E M KRG +V ++ + + +D A + F ++ + + + L Y SL+N
Sbjct: 204 ALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVN 263
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPF----NSLMTLYAKTGHPEKIPAIIQEMKAS 187
YCK T++A+ +++ G P+ N+LM Y K G ++IP + ++M
Sbjct: 264 GYCKSSRTKEAQKVVD-------GIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACR 316
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
+P+ TYN+ M L + A +E M G V D +++ + +A ++
Sbjct: 317 GCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCV-PDVVSYNIIIDGLFKASKPKE 375
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 307
A + L ++ D Y L+ + + + I +++ A + N++Y +I
Sbjct: 376 ARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLIS 435
Query: 308 VLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD 366
L L A + E +GC N +I KEG L+ A L + G +
Sbjct: 436 GLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVE 495
Query: 367 PNAKTWEIFSDYYLRNG 383
N T+ IF D + G
Sbjct: 496 ANTVTYNIFIDRLCKEG 512
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 95/425 (22%), Positives = 162/425 (38%), Gaps = 65/425 (15%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELM 138
M +R + V I +D + K D A ++ + + + +T+ S+++ CK
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
E+A +LL M E N S +N+L++ K + ++ ++ E +S +PD TY++
Sbjct: 61 FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
L I A +++EM +G + T++ L +A EKA L+ L +
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNG-CTPNLVTYNTLIDGLCKASKTEKAYELLETLVSS 179
Query: 259 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 318
D+ Y ++ + G L + ++ + + I+Y +++ L + A
Sbjct: 180 GFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEA 239
Query: 319 EKCFKEWESGCATYD--------------------------------IRVTNVMIGAYAK 346
FKE S T D I V N ++ Y K
Sbjct: 240 HHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCK 299
Query: 347 EGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRG----- 401
EGRL+ + E RG PN KT+ I D ++G + A LE G
Sbjct: 300 EGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVS 359
Query: 402 -----DG-------------------GKWVPSSETIRTFMRHFEQEKDVDGAEGFLE-IL 436
DG P + T T M F +E+ D A G L+ ++
Sbjct: 360 YNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMI 419
Query: 437 KKAVD 441
K VD
Sbjct: 420 KAGVD 424
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 130/304 (42%), Gaps = 16/304 (5%)
Query: 79 ENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKE 136
E+M RG + I +D + K +D A + + + ++Y +++ K
Sbjct: 311 EDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKA 370
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 196
++A +L++M + + ++ +N+LM + K + I++ M + + PD+ TY
Sbjct: 371 SKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTY 430
Query: 197 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 256
N + L+ N + A ++ EM R+G V + TT++ + + G ++A + +
Sbjct: 431 NTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMT 490
Query: 257 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWR---SLRLAFPNTANISYLNMIQVLVNLK 313
+ Y I + G L E + +LR +SY +I L +
Sbjct: 491 GHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLR------DEVSYTTVIIGLCKAE 544
Query: 314 DLPGAEKCFKEW---ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
L A K +E + C T N++I A+ K RL+ A L E +RG P+
Sbjct: 545 QLDRASKLAREMVAVKGLCITS--HTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVI 602
Query: 371 TWEI 374
T+ +
Sbjct: 603 TYNM 606
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 130/338 (38%), Gaps = 47/338 (13%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
TY L++ CK T+KA +L +M + + ++ FNS+M K G E+ +++
Sbjct: 11 FTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAV 70
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + P TYN + L ++ A+ +++E G V D T+S LA + G
Sbjct: 71 MAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFV-PDVVTYSILADGLCKRG 129
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
++A +KE+ +L Y LI + + Y
Sbjct: 130 RIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYE------------------ 171
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+++ LV+ +P D+ +++ KEGRL+ A ++ E +R
Sbjct: 172 -LLETLVSSGFVP----------------DVVTYTIIVDGLCKEGRLDKALKMVEGMLKR 214
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID-TGRGDGGKWVPSSETIRTFMRHFEQ 422
G P+ T+ + R G + A ++ + D +V R E
Sbjct: 215 GCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEA 274
Query: 423 EKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 460
+K VDG G I +V+ L+ Y GR
Sbjct: 275 QKVVDGIRGTPYI----------DVYNALMDGYCKEGR 302
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 95/205 (46%), Gaps = 4/205 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCY 133
AL L ++M G+ I +D + K +D A + ++ +T ++ ++Y +++
Sbjct: 482 ALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM-DTLRDEVSYTTVIIGL 540
Query: 134 CKELMTEKAEALLEKMKEL-NLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPD 192
CK ++A L +M + L +S FN L+ + KT ++ +++ M P
Sbjct: 541 CKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPS 600
Query: 193 SYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERAL 252
TYN+ + L ++ + A + +EM G VA+ +++ L G ++A + L
Sbjct: 601 VITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASS-VSYTVLIYGLCGQGRGKEALQVL 659
Query: 253 KELENRNAH-RDLSAYQFLITLYGQ 276
+E+ + + DL + + L GQ
Sbjct: 660 EEMASSDCEIDDLKCRKLYLALRGQ 684
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 149/326 (45%), Gaps = 3/326 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
AL++ ++ME+ G+ V I +D + K Q ++ A + F +D + N +T+ SL++
Sbjct: 423 ALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLID 482
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
K + A +L EKM + ++ + SL+ + K G E I +EM + P
Sbjct: 483 GLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSP 542
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D N +M + + + E+ G + D ++S L V+AGL +
Sbjct: 543 DLTLINTYMDCVFKAGETEKGRALFREINAHGFIP-DARSYSILIHGLVKAGLANETYEL 601
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
++ + D AY +I + ++G +++ Y++ +++ ++Y ++I L
Sbjct: 602 FYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAK 661
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+ L A F+E +S ++ V + +I + K GR++ A + E ++G PN T
Sbjct: 662 IDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYT 721
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAID 397
W D ++ ++ A+ C + D
Sbjct: 722 WNCLLDALVKAEEINEALICFQSMKD 747
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 134/316 (42%), Gaps = 8/316 (2%)
Query: 145 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 204
L +M+EL + F +L+ ++A+ G + +++ EMK++S+ D YNV +
Sbjct: 217 LFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFG 276
Query: 205 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 264
+ + + EMK G + D T++++ + +A ++A ++LE
Sbjct: 277 KAGKVDMSWKFFHEMKSHGLMPDD-VTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCA 335
Query: 265 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 324
AY +I YG G E Y + + + I+Y ++ L + + A + F+E
Sbjct: 336 YAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEE 395
Query: 325 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 384
+ A ++ N++I +EG+L A E+++ R G PN T I D +
Sbjct: 396 MKRD-AVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQK 454
Query: 385 MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLG 444
++ A E D P++ T + + + VD A E + G
Sbjct: 455 LEEACSIFEGM------DDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPG 508
Query: 445 VEVFEPLIRTYAAAGR 460
V+ LIR++ GR
Sbjct: 509 AIVYTSLIRSFFKCGR 524
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 117/279 (41%), Gaps = 4/279 (1%)
Query: 97 LDLVAKVQGIDAAENYFV-DLPETSKNHL--TYGSLLNCYCKELMTEKAEALLEKMKELN 153
+ ++ +++ + A NYF +T K H Y SLL + + E +LE+M
Sbjct: 96 IGVLKRLKDANTAVNYFQWAEKQTEKVHCPEAYNSLLMVMARNTEFDHLERILEEMSLSG 155
Query: 154 LGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAE 213
G SS L+ K+ + IIQ M+ P Y + + AL+ V +
Sbjct: 156 FGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPML 215
Query: 214 RVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITL 273
+ +M+ G + F+ L ++ G + A L E+++ + D+ Y I
Sbjct: 216 ILFHQMQELG-YEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDC 274
Query: 274 YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYD 333
+G+ G + ++ + ++ +++Y +MI VL L A + F++ E
Sbjct: 275 FGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPC 334
Query: 334 IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
N MI Y G+ + A L ER + +G+ P+ +
Sbjct: 335 AYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAY 373
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/346 (18%), Positives = 136/346 (39%), Gaps = 37/346 (10%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
AL L + M+ ++ + + +D K +D + +F ++ + +TY S++
Sbjct: 249 ALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIG 308
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK ++A L E++++ + +N+++ Y G ++ +++ KA +P
Sbjct: 309 VLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIP 368
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRD------------------GRVAADWTT-- 231
YN + L + A R+ EEMKRD G++ A
Sbjct: 369 SVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAALEIRD 428
Query: 232 -------FSNLASIYV------EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 278
F N+ ++ + +A E+A + ++++ + + LI G+ G
Sbjct: 429 DMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCG 488
Query: 279 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVT 337
+ + Y ++ + I Y ++I+ K +KE +GC+ D+ +
Sbjct: 489 RVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSP-DLTLI 547
Query: 338 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
N + K G E L G P+A+++ I ++ G
Sbjct: 548 NTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAG 593
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 118/276 (42%), Gaps = 12/276 (4%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y ++++ +CK KA LLE+MK + + + S++ AK ++ + +E K
Sbjct: 617 YNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 676
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
++ I + Y+ + V I A ++EE+ + G + + T++ L V+A
Sbjct: 677 SNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKG-LTPNVYTWNCLLDALVKAEEI 735
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL-RLAF-PNTANISYL 303
+A + +++ + Y LI + ++ + W+ + +L PNT I+Y
Sbjct: 736 NEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNT--ITYT 793
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
MI L ++ A F +++ D N MI + + +A L E R +
Sbjct: 794 TMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLK 853
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
G + + KT + D + +CLE+A G
Sbjct: 854 GCNIHTKTCVVLLDALHK-------AECLEQAAIVG 882
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 73/152 (48%), Gaps = 2/152 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A + E + ++G+ V LD + K + I+ A F + + N +TY L+N
Sbjct: 703 AYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILIN 762
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C+ KA ++M++L L +++ + ++++ AK G+ + + KA+ +P
Sbjct: 763 GLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIP 822
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
DS +YN + L++ N A + EE + G
Sbjct: 823 DSASYNAMIEGLSSANKAMDAYALFEETRLKG 854
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 92/221 (41%), Gaps = 3/221 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK--NHLTYGSLLN 131
A +L E M+ +G TV +D +AK+ +D A F + N + Y SL++
Sbjct: 633 AYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLID 692
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ K ++A ++E++ + L + +N L+ K + Q MK P
Sbjct: 693 GFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPP 752
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ TY++ + L V + A +EM++ G + + T++ + S +AG +A
Sbjct: 753 NQITYSILINGLCRVRKFNKAFVFWQEMQKLG-LKPNTITYTTMISGLAKAGNILEASGL 811
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL 292
+ D ++Y +I + Y ++ RL
Sbjct: 812 FSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRL 852
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 158/386 (40%), Gaps = 44/386 (11%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY ++L+ +CK+ M ++A LL +M+ + + + +N L+ + +G E+ +IQ+
Sbjct: 203 VTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQD 262
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + YTY+ +R I A R+ EEM G V T++ + + G
Sbjct: 263 MLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPT-VVTYNTIMYGLCKWG 321
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
A + L + N+N DL +Y LI Y + GN+ E + ++ LR + ++Y
Sbjct: 322 RVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYN 381
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL------- 356
+I L L DL A + E D+ + + K G L A+EL
Sbjct: 382 TLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNR 441
Query: 357 ----------------------------KERARRRGADPNAKTWEIFSDYYLRNGDMKLA 388
+E RG P+ T+ +F D + G++K A
Sbjct: 442 GLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEA 501
Query: 389 VDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG-FLEILKKAVDDLGVEV 447
+ ++K + G VP T + + + A FLE+L K + V
Sbjct: 502 SELVKKMLYNG------LVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFP-SVVT 554
Query: 448 FEPLIRTYAAAGRTSPVMLRRLKMEK 473
+ LI +YA GR +L +M +
Sbjct: 555 YTVLIHSYAVRGRLKLAILHFFEMHE 580
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 53/264 (20%), Positives = 105/264 (39%), Gaps = 20/264 (7%)
Query: 10 TKNIAKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRK 69
+ K + + L+D + +G Q ++F + V + ++GD K
Sbjct: 419 VRGFCKMGNLPMAKELFDEMLNRG-------LQPDRFAYITRIVGELKLGDPSK------ 465
Query: 70 LYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYG 127
A + E M RG + + +D + K+ + A + +H+TY
Sbjct: 466 ----AFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYT 521
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 187
S+++ + KA AL +M + S + + L+ YA G + EM
Sbjct: 522 SIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEK 581
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
+ P+ TYN + L V + A EM+ G ++ + T++ L + G +++
Sbjct: 582 GVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKG-ISPNKYTYTILINENCNLGHWQE 640
Query: 248 AERALKELENRNAHRDLSAYQFLI 271
A R K++ +R D ++ L+
Sbjct: 641 ALRLYKDMLDREIQPDSCTHRSLL 664
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 60/309 (19%), Positives = 118/309 (38%), Gaps = 15/309 (4%)
Query: 158 SMP-----FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV-NDISG 211
SMP + L+ +Y K EK + +M + ++PD N +R L N+I
Sbjct: 126 SMPSVKLILDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDV 185
Query: 212 AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 271
A V M G + T++ + + + G+ ++A + L +++ + Y L+
Sbjct: 186 AREVYNVMVECG-ICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLV 244
Query: 272 TLYGQTGNLSEVYRIWRS-LRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCA 330
+G + + + + LRL + +Y +I+ + A + +E S A
Sbjct: 245 NGLSHSGEMEQAKELIQDMLRLGL-EVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGA 303
Query: 331 TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
+ N ++ K GR+ +A +L + + P+ ++ Y R G++
Sbjct: 304 VPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIG---- 359
Query: 391 CLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEP 450
E + PS T T + + D+D A + + K D V F
Sbjct: 360 --EAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTT 417
Query: 451 LIRTYAAAG 459
+R + G
Sbjct: 418 FVRGFCKMG 426
>gi|12321886|gb|AAG50982.1|AC073395_24 hypothetical protein, 3' partial; 101251-102939 [Arabidopsis
thaliana]
Length = 532
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 144/299 (48%), Gaps = 42/299 (14%)
Query: 62 LKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK 121
++KLR AL++S+ M ++ M D + L KV ++ AE +F +PE +
Sbjct: 80 VEKLRSSNRPRQALEVSDWMVEQKMYNLPEDFSARFHLTEKVLNLEEAEKFFESIPENMR 139
Query: 122 NHLTYGSLLNCYCK---ELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
Y SLL Y + E +KAE++ +KMK+L L P+NS+ +LY+ G+ +K+
Sbjct: 140 FESMYNSLLRSYARQSGEKALKKAESVFKKMKKLGLLLRPSPYNSMTSLYSSLGNRDKVD 199
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
I++EMK +++ D+ T N +R AAV+D++ ++ + + K R+ D T +A
Sbjct: 200 EILREMKENNVELDNVTVNNALRVYAAVSDVATMDKFLADRKEITRL--DGLTMLAMAKA 257
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
YV RD G + +V+R+W + A
Sbjct: 258 YV---------------------RD--------------GEIEDVHRVWDKYK-ATRQKD 281
Query: 299 NISYLNMIQVLVNLKDLPGAEKC-FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
N + +I L+ L D GAEK + EWE +D R+ ++++ Y ++G + A++L
Sbjct: 282 NEEFRTLIGSLLKLGDTKGAEKIYYNEWECSGLEFDNRIPDMLVSGYREKGMVMKADKL 340
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 88/158 (55%), Gaps = 3/158 (1%)
Query: 60 DTLKKLRDRKLYYPALKLSENM-EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF-VDLP 117
D +K LRD AL+ S M +K+ N D A L L KV G++ AEN+F +P
Sbjct: 375 DLIKNLRDSNQLSKALEASTWMCQKKVFNLFSEDYATRLHLTEKVLGLEEAENFFESSIP 434
Query: 118 ETSKNHLTYGSLLNCYCKELMTE-KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK 176
E K++ Y +LL+CY + T+ KAEA+ EKM+EL L PFNSL++LY+ G
Sbjct: 435 ENMKDYSVYDTLLSCYARSSNTQSKAEAVFEKMRELGLQSKLSPFNSLISLYSGQGKLSV 494
Query: 177 IPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAER 214
+ ++ +MK +I PD T N +RA A + I E+
Sbjct: 495 VNILLCDMKHKNIEPDIVTRNNVLRANAYILAIDSMEK 532
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 161/386 (41%), Gaps = 44/386 (11%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY ++L+ +CK+ ++A LL +M+++ + + +N L+ + +G E+ +IQE
Sbjct: 191 VTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQE 250
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + +YTY+ +R + A R+ EEM G V T++ + + G
Sbjct: 251 MLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPT-LVTYNTIMYGLCKWG 309
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
A + L + N+N DL +Y LI Y + GN+ E + ++ LR + ++Y
Sbjct: 310 RVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYN 369
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL------- 356
+I L + DL A + E D+ +++ + K G L A+EL
Sbjct: 370 TLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNR 429
Query: 357 ----------------------------KERARRRGADPNAKTWEIFSDYYLRNGDMKLA 388
+E RG P+ T+ +F D + G++K A
Sbjct: 430 GLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEA 489
Query: 389 VDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG-FLEILKKAVDDLGVEV 447
+ ++K + G VP T + + + A FLE+L K + V
Sbjct: 490 SELVKKMLYNG------LVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFP-SVVT 542
Query: 448 FEPLIRTYAAAGRTSPVMLRRLKMEK 473
+ LI +YA GR +L +M +
Sbjct: 543 YTVLIHSYAVRGRLKLAILHFFEMHE 568
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 73/362 (20%), Positives = 138/362 (38%), Gaps = 51/362 (14%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKEL---NLGFSSMPFNSLMTLYAKTGHPEKI 177
++ LTY +L+ + + A ++EK+ + N + + L+ +YAK EK
Sbjct: 79 RSELTYAVILDILARNGLMRSAYCVMEKVVSVKMENGVVDVLILDLLLWIYAKKSMLEKC 138
Query: 178 PAIIQEMKASSIMPD------------------------------------SYTYNVWMR 201
+ +M + ++PD TYN +
Sbjct: 139 LLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLD 198
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 261
+ + A +++ +M++ G + D T++ L + +G E+A+ ++E+
Sbjct: 199 SFCKQGKVQEALQLLLQMQKMGCLPND-VTYNVLVNGLSHSGELEQAKELIQEMLRLGLE 257
Query: 262 RDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAE 319
Y LI Y + G L E R+ + R A P ++Y ++ L + A
Sbjct: 258 VSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTL--VTYNTIMYGLCKWGRVSDAR 315
Query: 320 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 379
K + D+ N +I Y + G + A L R RG P+ T+ D
Sbjct: 316 KLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGL 375
Query: 380 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA-EGFLEILKK 438
R GD+ +A+ ++ I G P T +R F + ++ A E F E+L +
Sbjct: 376 CRMGDLDVAMRLKDEMIKHGPD------PDVFTFTILVRGFCKLGNLPMAKELFDEMLNR 429
Query: 439 AV 440
+
Sbjct: 430 GL 431
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 52/264 (19%), Positives = 105/264 (39%), Gaps = 20/264 (7%)
Query: 10 TKNIAKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRK 69
+ K + + L+D + +G Q ++F + V + ++GD K
Sbjct: 407 VRGFCKLGNLPMAKELFDEMLNRG-------LQPDRFAYITRIVGELKLGDPSK------ 453
Query: 70 LYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYG 127
A + E M RG + + +D + K+ + A + +H+TY
Sbjct: 454 ----AFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYT 509
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 187
S+++ + KA A+ +M + S + + L+ YA G + EM
Sbjct: 510 SIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEK 569
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
+ P+ TYN + L V + A + EM+ G ++ + T++ L + G +++
Sbjct: 570 GVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKG-ISPNKYTYTILINENCNLGHWQE 628
Query: 248 AERALKELENRNAHRDLSAYQFLI 271
A R K++ +R D + L+
Sbjct: 629 ALRLYKDMLDREIQPDSCTHSALL 652
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 94/419 (22%), Positives = 172/419 (41%), Gaps = 48/419 (11%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
AL L + ME++G+ + + +D + ++ A + E N +TY +L+N
Sbjct: 342 ALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALIN 401
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
YCK M E A ++E M+ NL ++ +N L+ Y K + K ++ +M ++P
Sbjct: 402 GYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKR-NVHKAMGVLNKMLERKVLP 460
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D TYN + + A R++ M G V WT S + S+ ++ E+A
Sbjct: 461 DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSL-CKSKRVEEACDL 519
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYL------ 303
LE ++ ++ Y LI Y + G ++E + + + + PN+ + L
Sbjct: 520 FDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCT 579
Query: 304 ---------------------------NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 336
+I L+ D A + F++ S D
Sbjct: 580 DGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHT 639
Query: 337 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 396
I Y +EGRL++AE++ + + G P+ T+ Y G A L++
Sbjct: 640 YTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMH 699
Query: 397 DTGRGDGGKWVPSSETIRTFMRHFEQEK--DVDGAEGFLEILKKAVD-DLGVEVFEPLI 452
DTG PS T + ++H + K V G E + ++ ++ D+ VE+ E ++
Sbjct: 700 DTG------CEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMV 752
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 163/370 (44%), Gaps = 19/370 (5%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY L++ C + EKA LL +M E L + + +N+L+ Y K G E +++ M
Sbjct: 360 TYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELM 419
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
++ ++ P++ TYN ++ N + A V+ +M + +V D T+++L +G
Sbjct: 420 ESRNLRPNTRTYNELIKGYCKRN-VHKAMGVLNKM-LERKVLPDVVTYNSLIDGQCRSGN 477
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISY 302
F+ A R L + +R D Y +I ++ + E ++ SL + PN + Y
Sbjct: 478 FDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNV--VMY 535
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+I + A ++ S + N +I +G+L+ A L+E+ +
Sbjct: 536 TALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVK 595
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ 422
P T I L++GD A ++ + +G P + T TF++ + +
Sbjct: 596 IDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTK------PDAHTYTTFIQTYCR 649
Query: 423 EKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSP--VMLRRLKMEKVEVSEAS 480
E + AE + +K+ + + LI+ Y GRT+ V+L+R+ E S+ +
Sbjct: 650 EGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHT 709
Query: 481 -----KKLLE 485
K LLE
Sbjct: 710 FLSLIKHLLE 719
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 134/326 (41%), Gaps = 24/326 (7%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
A +L M RG+ +D + K + ++ A + F L + N + Y +L++
Sbjct: 481 AYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALID 540
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
YCK +A +LEKM N +S+ FN+L+ G ++ + ++M + P
Sbjct: 541 GYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQP 600
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
T + + L D A R ++M G D T++ Y G + AE
Sbjct: 601 TVSTDTILIHRLLKDGDFDHAYRRFQQMLSSG-TKPDAHTYTTFIQTYCREGRLQDAEDM 659
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
+ +++ DL Y LI YG G + + + + + + ++L++I+ L+
Sbjct: 660 VAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLE 719
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+K G K E G ++N+M + EL E+ G PNAK+
Sbjct: 720 MK--YGK---VKGGEPGVCV----MSNMM--------EFDIVVELLEKMVEHGVTPNAKS 762
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAID 397
+E G++++A EK D
Sbjct: 763 YEKLMLGICEIGNLRVA----EKVFD 784
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 104/239 (43%), Gaps = 13/239 (5%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
+N+L+ A+ G +++ + EM + P+ YTYN + V ++ A + + +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIV 245
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
G + D+ T+++L Y + + A + KE+ + R+ AY LI L
Sbjct: 246 EAG-LDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIH------GL 298
Query: 281 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK------CFKEWESGCATYDI 334
RI ++ L + Y + V +K L G+E+ KE E +I
Sbjct: 299 CVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNI 358
Query: 335 RVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
V+I + + +LE A EL + +G PN T+ + Y + G ++ A+D +E
Sbjct: 359 HTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVE 417
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/304 (20%), Positives = 123/304 (40%), Gaps = 26/304 (8%)
Query: 89 TVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEK 148
+V+D LDL K+ ++ E L Y ++ CY L + L+++
Sbjct: 155 SVADTLFVLDLCRKMNKDESFE-------------LKYKLIIGCYNTLLNSLARFGLVDE 201
Query: 149 MKELNLGF-------SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 201
MK++ + + +N ++ Y K G+ E+ + + + + PD +TY +
Sbjct: 202 MKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIM 261
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 261
D+ A +V +EM G + + + VE + E + +K +++ + +
Sbjct: 262 GYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVK-MKDDDCY 320
Query: 262 RDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAE 319
+ Y LI + SE + + + + PN +Y +I L + L A
Sbjct: 321 PTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIH--TYTVLIDSLCSQCKLEKAR 378
Query: 320 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW-EIFSDY 378
+ + ++ N +I Y K G +E+A ++ E R PN +T+ E+ Y
Sbjct: 379 ELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGY 438
Query: 379 YLRN 382
RN
Sbjct: 439 CKRN 442
>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 149/326 (45%), Gaps = 3/326 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
AL++ ++ME+ G+ V I +D + K Q ++ A + F +D + N +T+ SL++
Sbjct: 178 ALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLID 237
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
K + A +L EKM + ++ + SL+ + K G E I +EM + P
Sbjct: 238 GLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSP 297
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D N +M + + + E+ G + D ++S L V+AGL +
Sbjct: 298 DLTLINTYMDCVFKAGETEKGRALFREINAHGFIP-DARSYSILIHGLVKAGLANETYEL 356
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
++ + D AY +I + ++G +++ Y++ +++ ++Y ++I L
Sbjct: 357 FYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAK 416
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+ L A F+E +S ++ V + +I + K GR++ A + E ++G PN T
Sbjct: 417 IDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYT 476
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAID 397
W D ++ ++ A+ C + D
Sbjct: 477 WNCLLDALVKAEEINEALICFQSMKD 502
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 118/276 (42%), Gaps = 12/276 (4%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y ++++ +CK KA LLE+MK + + + S++ AK ++ + +E K
Sbjct: 372 YNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 431
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
++ I + Y+ + V I A ++EE+ + G + + T++ L V+A
Sbjct: 432 SNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKG-LTPNVYTWNCLLDALVKAEEI 490
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL-RLAF-PNTANISYL 303
+A + +++ + Y LI + ++ + W+ + +L PNT I+Y
Sbjct: 491 NEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNT--ITYT 548
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
MI L ++ A F +++ D N MI + + +A L E R +
Sbjct: 549 TMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLK 608
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
G + + KT + D + +CLE+A G
Sbjct: 609 GCNIHTKTCVVLLDALHK-------AECLEQAAIVG 637
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 120/288 (41%), Gaps = 6/288 (2%)
Query: 99 LVAKVQGIDAAENYFVDLPETSKNHLTYG--SLLNCYCKELMTEKAEALLEKMKELNLGF 156
++ K +D A F L + K Y +++ Y ++A LLE+ K
Sbjct: 64 VLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIP 123
Query: 157 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
S + +N ++T K E+ I +EMK ++ P+ TYN+ + L ++ A +
Sbjct: 124 SVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIR 182
Query: 217 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 276
++M+R G + + T + + +A E+A + ++++ + + LI G+
Sbjct: 183 DDMERAG-LFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGK 241
Query: 277 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIR 335
G + + Y ++ + I Y ++I+ K +KE +GC+ D+
Sbjct: 242 CGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSP-DLT 300
Query: 336 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
+ N + K G E L G P+A+++ I ++ G
Sbjct: 301 LINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAG 348
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 73/152 (48%), Gaps = 2/152 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A + E + ++G+ V LD + K + I+ A F + + N +TY L+N
Sbjct: 458 AYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILIN 517
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C+ KA ++M++L L +++ + ++++ AK G+ + + KA+ +P
Sbjct: 518 GLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIP 577
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
DS +YN + L++ N A + EE + G
Sbjct: 578 DSASYNAMIEGLSSANKAMDAYALFEETRLKG 609
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 88/223 (39%), Gaps = 7/223 (3%)
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
+ +A ++A ++LE AY +I YG G E Y + +
Sbjct: 64 VLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIP 123
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
+ I+Y ++ L + + A + F+E + A ++ N++I +EG+L A E++
Sbjct: 124 SVIAYNCILTCLGKKRRVEEALRIFEEMKRD-AVPNVPTYNILIDMLCREGKLNAALEIR 182
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 417
+ R G PN T I D + ++ A E D P++ T + +
Sbjct: 183 DDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGM------DDKVCTPNAVTFSSLI 236
Query: 418 RHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 460
+ VD A E + G V+ LIR++ GR
Sbjct: 237 DGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGR 279
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 92/221 (41%), Gaps = 3/221 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK--NHLTYGSLLN 131
A +L E M+ +G TV +D +AK+ +D A F + N + Y SL++
Sbjct: 388 AYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLID 447
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ K ++A ++E++ + L + +N L+ K + Q MK P
Sbjct: 448 GFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPP 507
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ TY++ + L V + A +EM++ G + + T++ + S +AG +A
Sbjct: 508 NQITYSILINGLCRVRKFNKAFVFWQEMQKLG-LKPNTITYTTMISGLAKAGNILEASGL 566
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL 292
+ D ++Y +I + Y ++ RL
Sbjct: 567 FSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRL 607
>gi|449455399|ref|XP_004145440.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Cucumis sativus]
Length = 576
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 130/334 (38%), Gaps = 39/334 (11%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL--PETSKNHLTYGSLLN 131
A+++ M++ G T + +++ K A+N F ++ N T+ +L+N
Sbjct: 244 AVEIFHRMKRDGCQPTTDTYTMLINVYGKESKSHMAQNIFDEMRTQRCKPNICTFTALVN 303
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+E + EKAE + E+M+E +N+LM Y++ G P I M+ P
Sbjct: 304 ALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEP 363
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D +YN+ + A A+ V EEMKR G + + L S Y AG K E
Sbjct: 364 DRASYNIMVDAYGRAGLHEDAQAVFEEMKRIG-ITPTMKSHMLLLSAYSSAGNVAKCEDI 422
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
+ ++ D ++ LYG+ G ++
Sbjct: 423 IGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKM---------------------------- 454
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
E F + G DI N++I Y + G +E EEL + + +P+ T
Sbjct: 455 -------EDLFSTMQKGPCRADISTYNILINVYGRAGFVERMEELFQLLPAKNLEPDVVT 507
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAIDTG-RGDGG 404
W Y R K ++ EK ID G DGG
Sbjct: 508 WTSRIGAYSRKKLYKRCLELFEKMIDAGCYPDGG 541
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 105/477 (22%), Positives = 182/477 (38%), Gaps = 69/477 (14%)
Query: 9 RTKNIAKRSKKHLEEALYDRLFKKGSSDVS--------VRQQLNQFLKSKKRVFK-WEVG 59
RT N + S+K +L R +K GS V + QQ+ +F++ + W+
Sbjct: 51 RTFNRKRLSRKRCG-SLRGRGWKYGSGFVDGIFPVLGPLAQQIMEFVREEVDYMGLWDSL 109
Query: 60 DTLK--------------KLRDRKLYYPALKLSE-NMEKRGMNKTVSDQAIHLDLVAKVQ 104
DTL +LR K + P + + E M K V + +D +
Sbjct: 110 DTLPATNSTWDDIISVAVQLRLNKKWGPIILICEWIMNKSTFRPDVIVYNLLMDAYGQRS 169
Query: 105 GIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFN 162
E+ +++L E+ TY LL YCK + EKAEA+ +M++ L S++ +N
Sbjct: 170 LYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAVFAEMRKYGLSPSAIVYN 229
Query: 163 SLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRD 222
+ + K G+ K I MK P + TY + + + A+ + +EM R
Sbjct: 230 AYIDGLVKGGNNVKAVEIFHRMKRDGCQPTTDTYTMLINVYGKESKSHMAQNIFDEM-RT 288
Query: 223 GRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 282
R + TF+ L + GL EKAE ++++ D+ AY L+ Y + G
Sbjct: 289 QRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAG---- 344
Query: 283 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 342
FP GA + F + D N+M+
Sbjct: 345 -----------FPY--------------------GAAEIFSLMQHMGCEPDRASYNIMVD 373
Query: 343 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGD 402
AY + G E+A+ + E +R G P K+ + Y G++ D + + +G
Sbjct: 374 AYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLK- 432
Query: 403 GGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
P + + + + + + E ++K + + LI Y AG
Sbjct: 433 -----PDTFVMNSMLNLYGRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAG 484
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 140/323 (43%), Gaps = 10/323 (3%)
Query: 107 DAAENYFVDLPET-SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLM 165
DA E +F L + N +T +L++ CK ++A LL+KM E + +N+L+
Sbjct: 541 DAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLI 600
Query: 166 TLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK-RDGR 224
+ K G E+ + EM I PD++TYN+ + + + + A + E K RD
Sbjct: 601 SGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRD-- 658
Query: 225 VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVY 284
+ + T+ + Y +A E+ E+ EL +N + Y LI Y + GN E +
Sbjct: 659 LVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAF 718
Query: 285 RIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAY 344
++ +R +Y ++I + N+ + A+ E ++ +IG Y
Sbjct: 719 KLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGY 778
Query: 345 AKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGG 404
K G+++ + + PN T+ + D Y ++GDMK A L + + G
Sbjct: 779 CKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKG----- 833
Query: 405 KWVPSSETIRTFMRHFEQEKDVD 427
VP + T F +E ++
Sbjct: 834 -IVPDTVTYNVLTNGFCKEGKIE 855
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 120/287 (41%), Gaps = 38/287 (13%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP--ETSKNHLTYGSLLN 131
KL M K+G+ + + + ++ +D A N + + + N TYG +++
Sbjct: 612 GFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMID 671
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
YCK E+ E L ++ NL +S+ +N+L+ Y + G+ + + +M++ I P
Sbjct: 672 GYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPP 731
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ TY+ + + + + A+ +I+EM+++G + + ++ L Y + G +K
Sbjct: 732 TTATYSSLIHGMCNIGRMEDAKCLIDEMRKEG-LLPNVVCYTALIGGYCKLGQMDKVVNV 790
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
L+E+ + + H + Y +I Y ++G
Sbjct: 791 LQEMSSYDIHPNKITYTVMIDGYSKSG--------------------------------- 817
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
D+ A K E D NV+ + KEG++E + L E
Sbjct: 818 --DMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGKLLAE 862
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 167/393 (42%), Gaps = 15/393 (3%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNH--LTYGSLLN 131
A++L +MEK G++ V + + K +D A + + + N +TY L+N
Sbjct: 332 AIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLIN 391
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
K +A ++L++ E + + +N+L+ Y K G+ I +M + I P
Sbjct: 392 GLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINP 451
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+S T N ++ + + AE ++EEM G + + F+ + FE A R
Sbjct: 452 NSVTLNSIIQGFCKIGQMEQAECILEEMLSRG-FSINPGAFTTIIHWLCMNSRFESALRF 510
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW-RSLRLAFPNTANISYLN-MIQVL 309
L+E+ RN + L+ + G S+ +W R L F AN+ N +I L
Sbjct: 511 LREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGF--GANLVTTNALIHGL 568
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
++ A + K+ D N +I KEG++E +L+ ++G +P+
Sbjct: 569 CKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDT 628
Query: 370 KTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF-EQEKDVDG 428
T+ + R G + AV+ + VP+ T + + + +K +G
Sbjct: 629 FTYNLLIHGMCRIGKLDEAVNLWNEC------KSRDLVPNVYTYGVMIDGYCKADKIEEG 682
Query: 429 AEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 461
+ F E+L + + +L V+ LIR Y G T
Sbjct: 683 EKLFTELLTQNL-ELNSVVYNTLIRAYCRNGNT 714
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 91/221 (41%), Gaps = 2/221 (0%)
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+ + + + P T + +L N++ + V E M++ V+ D FS +
Sbjct: 265 GVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQG--VSPDVYLFSTAINA 322
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
+ + G E A + ++E ++ Y LI + GNL E +R + N
Sbjct: 323 FCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNAT 382
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
I+Y +I L+ L+ A KE T + V N +I Y K G L +A ++
Sbjct: 383 LITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRG 442
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+G +PN+ T + + G M+ A LE+ + G
Sbjct: 443 DMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRG 483
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 109/309 (35%), Gaps = 71/309 (22%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
+ + +N +CK E A L M++L
Sbjct: 316 FSTAINAFCKGGKVEDAIQLFFDMEKL--------------------------------- 342
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
+ P+ TYN + L ++ A R E+M +DG V A T+S L + ++ F
Sbjct: 343 --GVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDG-VNATLITYSVLINGLMKLEKF 399
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
+A LKE + + Y LI Y + GNL + RI + N +++ ++
Sbjct: 400 NEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSI 459
Query: 306 IQVLVNLKDLPGAEKCFKEWES-------GCATYDIR----------------------- 335
IQ + + AE +E S G T I
Sbjct: 460 IQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNM 519
Query: 336 -----VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
+ ++G KEG+ +A EL R +G N T + G+M+ AV
Sbjct: 520 RPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVR 579
Query: 391 CLEKAIDTG 399
L+K ++ G
Sbjct: 580 LLKKMLERG 588
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 134/308 (43%), Gaps = 11/308 (3%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY L+N CK + E+A +L +M L +S+ +N L+ + ++
Sbjct: 424 NVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLL 483
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EM PD +TYN + L V+ I A R+ M DG VA + T++ L +
Sbjct: 484 SEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANN-VTYNTLIHALLR 542
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G F+KA + ++ R D Y LI + + GN+ + ++ + + IS
Sbjct: 543 RGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTIS 602
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
MI L + + A + ++ + DI N ++ K GR++ A L +R +
Sbjct: 603 CNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQ 662
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSET----IRTFM 417
G P+A T+ F + + G + A + I+ G +VPS+ T + T +
Sbjct: 663 VEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENG------FVPSNLTWNVLVYTLL 716
Query: 418 RHFEQEKD 425
+ QE +
Sbjct: 717 KQSNQENN 724
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 106/278 (38%), Gaps = 41/278 (14%)
Query: 108 AAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLM 165
A N F D+ S T+G ++ C + A +LL M + +S+ + +L+
Sbjct: 201 VATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLI 260
Query: 166 TLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRV 225
++ + +++EM MPD T+N + L VN I A ++++ M G
Sbjct: 261 HALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRG-F 319
Query: 226 AADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 285
D T+ L G +A + L ++ N + LI Y +G L E
Sbjct: 320 YPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNN----AILNTLINGYVMSGQLKEAQ- 374
Query: 286 IWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 345
S+LN + ++N P DI N+++
Sbjct: 375 ---------------SFLN--ETMINFGFQP----------------DIFTYNILMHGLC 401
Query: 346 KEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
KEG L A +L RRG +PN T+ I + + G
Sbjct: 402 KEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAG 439
>gi|91806413|gb|ABE65934.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 279
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 89/159 (55%), Gaps = 3/159 (1%)
Query: 60 DTLKKLRDRKLYYPALKLSENM-EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF-VDLP 117
D +K LRD AL+ S M +K+ N D A L L KV G++ AEN+F +P
Sbjct: 121 DLIKNLRDSNQLSKALEASTWMCQKKVFNLFSEDYATRLHLTEKVLGLEEAENFFESSIP 180
Query: 118 ETSKNHLTYGSLLNCYCKELMTE-KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK 176
E K++ Y +LL+CY + T+ KAEA+ EKM+EL L PFNSL++LY+ G
Sbjct: 181 ENMKDYSVYDTLLSCYARSSNTQSKAEAVFEKMRELGLQSKLSPFNSLISLYSGQGKLSV 240
Query: 177 IPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERV 215
+ ++ +MK +I PD T N +RA A + I E+V
Sbjct: 241 VNILLCDMKHKNIEPDIVTRNNVLRANAYILAIDSMEKV 279
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 271 ITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC-FKEWESGC 329
++LYG+ G + +V+R+W + A N + +I L+ L D GAEK + EWE
Sbjct: 1 MSLYGEAGEIEDVHRVWDKYK-ATRQKDNEEFRTLIGSLLKLGDTKGAEKIYYNEWECSG 59
Query: 330 ATYDIRVTNVMIGAYAKEGRLENAEEL 356
+D R+ ++++ Y ++G + A++L
Sbjct: 60 LEFDNRIPDMLVSGYREKGMVMKADKL 86
>gi|168030898|ref|XP_001767959.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680801|gb|EDQ67234.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 957
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 168/390 (43%), Gaps = 29/390 (7%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET-SKNHLTYGSLLNC 132
ALKL + M ++G+ T L ++ ++ A + D+ E S N +TYG+++N
Sbjct: 371 ALKLFDVMAEKGLLTTRMTWNTLLHCFVRIGDVEQATKVYNDMVEAGSANVVTYGNMINL 430
Query: 133 YCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPD 192
Y K M E AE LL +M+E + + S + LY + +K ++QEMK
Sbjct: 431 YSKFQMVEDAENLLAEMRESGVKPDEYIYGSFVKLYCNSDMIDKATMVVQEMKDD----- 485
Query: 193 SYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERAL 252
L +V + ER + + + + D + L EAG +AE L
Sbjct: 486 ---------GLESVCN----EREMFPLGQALQSPIDTQILNQLLIKRAEAGELREAELLL 532
Query: 253 KELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNL 312
+L +A +I LYG+ G + ++ SL+ + Y MI++
Sbjct: 533 DKLVEAGGCIVDTAAVLMINLYGRRGLFQKAKSLFNSLQKKDHPPSLYVYNTMIKLCAVC 592
Query: 313 KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
K+L A F E +D ++++ AY KEGR ++A L +RA++ G + +
Sbjct: 593 KELEEAIFVFDRMEENGRMFDAVTVSILVHAYTKEGRFKDAAGLMKRAKKVGVAMDTVAY 652
Query: 373 EIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGF 432
L++G++K A++ G PS++T + F + D+ A
Sbjct: 653 NTSLKANLKSGNLKGALEVY------GEMQEADIEPSAKTYTILISLFSKLGDLGRAVQA 706
Query: 433 LEILKKAVDDLGVE--VFEPLIRTYAAAGR 460
E+L + ++G + + +I Y AGR
Sbjct: 707 FEVLNSS--EVGADEIAYSQMIHCYGCAGR 734
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 146/334 (43%), Gaps = 19/334 (5%)
Query: 55 KWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFV 114
+WE DTL L+ E M +RG+ + + + K + A +
Sbjct: 154 RWERYDTL------------LEFYEAMRQRGLVPSAHVYRTMIVTLYKAERHSDALMLWE 201
Query: 115 DL--PETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTG 172
DL + N + Y +++ KE TE A + M+ + +N+++ K G
Sbjct: 202 DLLVEKLEPNFVLYAIIIHILNKEGRTEDAVHTFKDMRAAGHLPDELLYNTIICALGKLG 261
Query: 173 HPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTF 232
++ A+ +MK I+P +TY + + + + A + EM+R G + AD +
Sbjct: 262 RYQESEALYLDMKKQGIVPSKFTYTIMINVWSKAGRFASAAETLAEMQRSGCI-ADEVVY 320
Query: 233 SNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL 292
++ ++Y +AGL+E+AE+ KE++ +Y + + + G +E +++ +
Sbjct: 321 CSIINMYGKAGLYEEAEKIFKEMDTLGLLSHEKSYTSMAKVRAEAGRHAEALKLFDVMAE 380
Query: 293 AFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLE 351
T +++ ++ V + D+ A K + + E+G A ++ MI Y+K +E
Sbjct: 381 KGLLTTRMTWNTLLHCFVRIGDVEQATKVYNDMVEAGSA--NVVTYGNMINLYSKFQMVE 438
Query: 352 NAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 385
+AE L R G P+ + F Y N DM
Sbjct: 439 DAENLLAEMRESGVKPDEYIYGSFVKLYC-NSDM 471
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 125/322 (38%), Gaps = 7/322 (2%)
Query: 141 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 200
+AE LL+K+ E ++ LY + G +K ++ ++ P Y YN +
Sbjct: 527 EAELLLDKLVEAGGCIVDTAAVLMINLYGRRGLFQKAKSLFNSLQKKDHPPSLYVYNTMI 586
Query: 201 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 260
+ A ++ A V + M+ +GR+ D T S L Y + G F+ A +K +
Sbjct: 587 KLCAVCKELEEAIFVFDRMEENGRMF-DAVTVSILVHAYTKEGRFKDAAGLMKRAKKVGV 645
Query: 261 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 320
D AY + ++GNL ++ ++ A + +Y +I + L DL A +
Sbjct: 646 AMDTVAYNTSLKANLKSGNLKGALEVYGEMQEADIEPSAKTYTILISLFSKLGDLGRAVQ 705
Query: 321 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 380
F+ S D + MI Y GR + A +L + +G PN + D +
Sbjct: 706 AFEVLNSSEVGADEIAYSQMIHCYGCAGRPKEAADLFQEMETKGFKPNEVIYNNLLDAFA 765
Query: 381 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 440
R G A L G PSS T M + + AE L +++
Sbjct: 766 RAGLFAEARLLLSDMRRKG------CPPSSVTYLLLMSAYGSKGKPADAESLLHLMQDRG 819
Query: 441 DDLGVEVFEPLIRTYAAAGRTS 462
+ +IR Y G+ S
Sbjct: 820 LYPDCRHYNEVIRAYGNVGKLS 841
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 100/240 (41%), Gaps = 2/240 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY L++ + K +A E + +G + ++ ++ Y G P++ + QEM
Sbjct: 686 TYTILISLFSKLGDLGRAVQAFEVLNSSEVGADEIAYSQMIHCYGCAGRPKEAADLFQEM 745
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ P+ YN + A A + A ++ +M+R G T+ L S Y G
Sbjct: 746 ETKGFKPNEVIYNNLLDAFARAGLFAEARLLLSDMRRKG-CPPSSVTYLLLMSAYGSKGK 804
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
AE L +++R + D Y +I YG G LS+ RI+ L+ +
Sbjct: 805 PADAESLLHLMQDRGLYPDCRHYNEVIRAYGNVGKLSDACRIFYELKTVGIGLELGCFRT 864
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
++++ ++ + +K+ S T D + + + GR A++LK + +G
Sbjct: 865 LVKIHLDHGQFEQGWQIYKDL-SQSFTVDQNLYGIAVELCIGAGRRTEADQLKVELKGKG 923
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 1/134 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N + Y +LL+ + + + +A LL M+ SS+ + LM+ Y G P +++
Sbjct: 753 NEVIYNNLLDAFARAGLFAEARLLLSDMRRKGCPPSSVTYLLLMSAYGSKGKPADAESLL 812
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M+ + PD YN +RA V +S A R+ E+K G + + F L I+++
Sbjct: 813 HLMQDRGLYPDCRHYNEVIRAYGNVGKLSDACRIFYELKTVG-IGLELGCFRTLVKIHLD 871
Query: 242 AGLFEKAERALKEL 255
G FE+ + K+L
Sbjct: 872 HGQFEQGWQIYKDL 885
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/229 (19%), Positives = 102/229 (44%), Gaps = 3/229 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
AL++ M++ + + I + L +K+ + A F ++ E + + Y +++
Sbjct: 668 ALEVYGEMQEADIEPSAKTYTILISLFSKLGDLGRAVQAFEVLNSSEVGADEIAYSQMIH 727
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CY ++A L ++M+ + + +N+L+ +A+ G + ++ +M+ P
Sbjct: 728 CYGCAGRPKEAADLFQEMETKGFKPNEVIYNNLLDAFARAGLFAEARLLLSDMRRKGCPP 787
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
S TY + M A + + AE ++ M+ G + D ++ + Y G A R
Sbjct: 788 SSVTYLLLMSAYGSKGKPADAESLLHLMQDRG-LYPDCRHYNEVIRAYGNVGKLSDACRI 846
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
EL+ +L ++ L+ ++ G + ++I++ L +F N+
Sbjct: 847 FYELKTVGIGLELGCFRTLVKIHLDHGQFEQGWQIYKDLSQSFTVDQNL 895
>gi|302819880|ref|XP_002991609.1| hypothetical protein SELMODRAFT_133813 [Selaginella moellendorffii]
gi|300140642|gb|EFJ07363.1| hypothetical protein SELMODRAFT_133813 [Selaginella moellendorffii]
Length = 356
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 127/276 (46%), Gaps = 8/276 (2%)
Query: 114 VDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGH 173
+D E + + L GS N Y + L ++K + + +N ++ + K G
Sbjct: 61 IDPDEVTYDILVSGSGKNGY-------PIDRLFLEIKSRGVALTLRSYNVVICAFTKEGS 113
Query: 174 PEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFS 233
+K+ +I+EM + PD +++N + A A +V MK G V D T++
Sbjct: 114 IDKVEEVIREMIRQELRPDLFSFNALIAAYAMSRKPERGLQVFSNMKAAG-VLPDIVTYT 172
Query: 234 NLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 293
L ++ + + ++A +E+ D Y L+++YG+ G +++ I+ L+L
Sbjct: 173 TLIQMFSRSSMHKEAIEMFEEMVVNKCQPDFFVYSLLVSVYGKAGLVADALLIFHRLQLE 232
Query: 294 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
++Y ++I ++ L + K F + E+ D+ + N MI AYAK G + +A
Sbjct: 233 GHRPNIVTYTSLISAHLHKGLLEESRKHFSQMEAYGCRADVHLLNTMIDAYAKAGMVNDA 292
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 389
L R +G PN ++ I + +L G ++ A+
Sbjct: 293 ANLLHRLTAQGVCPNRASYAIIVEGFLHAGHVEEAL 328
>gi|422294672|gb|EKU21972.1| putative udp-glucosyltransferase, partial [Nannochloropsis gaditana
CCMP526]
Length = 535
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 119/273 (43%), Gaps = 14/273 (5%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKE-----------LNLGFSSMPFNSLMTLYAKTG 172
+TY +L++ Y TE AEA+L +M E L + + M + +LMT YA G
Sbjct: 243 VTYTTLMHAYAGRGDTEGAEAVLRRMLEGEGGRVREEEVLRVLPNVMTYTTLMTAYAAGG 302
Query: 173 HPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTF 232
E A+++ M+ + I P+ TY V M A D+ GAE V+ M VA + T+
Sbjct: 303 DVEGSEAVLERMEEACIAPNVMTYTVLMTAYTLRGDVKGAEGVLRRMI-SAYVAPNANTY 361
Query: 233 SNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL 292
+ L Y G AE L +E + L+T+Y G + + +
Sbjct: 362 TTLLHAYTVNGNAAGAEEVLARMEAAGVLPTALTFATLMTVYAARGEVESAKGVLARMEA 421
Query: 293 AFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVT-NVMIGAYAKEGRLE 351
A +++ ++ V D+ GAE+ + E+ A D +T N ++ YA +G +
Sbjct: 422 AGVGPTAMAFDTLLNAYVVAGDVGGAEQVLRRREA-EAYPDFPLTYNTLMNGYADKGDVA 480
Query: 352 NAEELKERARRRGADPNAKTWEIFSDYYLRNGD 384
AE + R R +G P+ T Y GD
Sbjct: 481 GAEGVLARMRAKGVGPDETTLSTLLHAYAEAGD 513
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 128/311 (41%), Gaps = 20/311 (6%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM- 219
F+++M +YA PE ++ + A ++PD TY M A A D GAE V+ M
Sbjct: 210 FHTVMKVYADERDPEGAEMVLGWLLARGLLPDVVTYTTLMHAYAGRGDTEGAEAVLRRML 269
Query: 220 KRDG---------RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 270
+ +G RV + T++ L + Y G E +E L+ +E ++ Y L
Sbjct: 270 EGEGGRVREEEVLRVLPNVMTYTTLMTAYAAGGDVEGSEAVLERMEEACIAPNVMTYTVL 329
Query: 271 ITLYGQTGNLSEVYRIWRSLRLAF--PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESG 328
+T Y G++ + R + A+ PN AN +Y ++ + GAE+ E+
Sbjct: 330 MTAYTLRGDVKGAEGVLRRMISAYVAPN-AN-TYTTLLHAYTVNGNAAGAEEVLARMEAA 387
Query: 329 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 388
++ YA G +E+A+ + R G P A ++ + Y+ GD+ A
Sbjct: 388 GVLPTALTFATLMTVYAARGEVESAKGVLARMEAAGVGPTAMAFDTLLNAYVVAGDVGGA 447
Query: 389 VDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVF 448
L R + + T T M + + DV GAEG L ++
Sbjct: 448 EQVLR------RREAEAYPDFPLTYNTLMNGYADKGDVAGAEGVLARMRAKGVGPDETTL 501
Query: 449 EPLIRTYAAAG 459
L+ YA AG
Sbjct: 502 STLLHAYAEAG 512
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 107/237 (45%), Gaps = 3/237 (1%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
N +TY +L+ Y E +EA+LE+M+E + + M + LMT Y G + +
Sbjct: 286 PNVMTYTTLMTAYAAGGDVEGSEAVLERMEEACIAPNVMTYTVLMTAYTLRGDVKGAEGV 345
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
++ M ++ + P++ TY + A + +GAE V+ M+ G V TF+ L ++Y
Sbjct: 346 LRRMISAYVAPNANTYTTLLHAYTVNGNAAGAEEVLARMEAAG-VLPTALTFATLMTVYA 404
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL-AFPNTAN 299
G E A+ L +E A+ L+ Y G++ ++ R A+P+
Sbjct: 405 ARGEVESAKGVLARMEAAGVGPTAMAFDTLLNAYVVAGDVGGAEQVLRRREAEAYPDFP- 463
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
++Y ++ + D+ GAE + D + ++ AYA+ G AE +
Sbjct: 464 LTYNTLMNGYADKGDVAGAEGVLARMRAKGVGPDETTLSTLLHAYAEAGDPLGAEAV 520
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 114/285 (40%), Gaps = 36/285 (12%)
Query: 178 PAIIQEMKA-SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLA 236
PA +E +A + PD T++ M+ A D GAE V+ + G + D T++ L
Sbjct: 191 PAEDEERRAVCDLSPDLPTFHTVMKVYADERDPEGAEMVLGWLLARG-LLPDVVTYTTLM 249
Query: 237 SIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL--SEVYRIWRSLRLAF 294
Y G E AE L+ + L G+ G + EV R+
Sbjct: 250 HAYAGRGDTEGAEAVLRRM-----------------LEGEGGRVREEEVLRV-------L 285
Query: 295 PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAE 354
PN ++Y ++ D+ G+E + E C ++ V++ AY G ++ AE
Sbjct: 286 PNV--MTYTTLMTAYAAGGDVEGSEAVLERMEEACIAPNVMTYTVLMTAYTLRGDVKGAE 343
Query: 355 ELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIR 414
+ R PNA T+ Y NG+ A + L R + +P++ T
Sbjct: 344 GVLRRMISAYVAPNANTYTTLLHAYTVNGNAAGAEEVL------ARMEAAGVLPTALTFA 397
Query: 415 TFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
T M + +V+ A+G L ++ A F+ L+ Y AG
Sbjct: 398 TLMTVYAARGEVESAKGVLARMEAAGVGPTAMAFDTLLNAYVVAG 442
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 41/93 (44%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+ + +LLN Y AE +L + + + +N+LM YA G ++
Sbjct: 429 MAFDTLLNAYVVAGDVGGAEQVLRRREAEAYPDFPLTYNTLMNGYADKGDVAGAEGVLAR 488
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
M+A + PD T + + A A D GAE V+
Sbjct: 489 MRAKGVGPDETTLSTLLHAYAEAGDPLGAEAVL 521
>gi|356554513|ref|XP_003545590.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Glycine max]
Length = 632
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 162/349 (46%), Gaps = 12/349 (3%)
Query: 113 FVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTG 172
V+ + + + + +L+N + + E A+ +++KMKE L S+ +N+L+ Y G
Sbjct: 132 LVEEKQMKPDSIFFNALINAFAESGNMEDAKKVVQKMKESGLKPSACTYNTLIKGYGIAG 191
Query: 173 HPEKIPAIIQEMKA-SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTT 231
P++ ++ M ++ P+ TYN+ +RAL + +IS A V+ +M G + D T
Sbjct: 192 KPDESMKLLDLMSTEGNVKPNLKTYNMLIRALCKMENISEAWNVVYKMTASG-MQPDVVT 250
Query: 232 FSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR-IWRSL 290
F+ +A+ Y + G +AE + E++ + + +I+ Y + G + E R ++R
Sbjct: 251 FNTIATAYAQNGKTAQAEAMILEMQRNSLKPNERTCTIIISGYCREGKVQEALRFVYRMK 310
Query: 291 RLAFPNTANISYLN-MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGR 349
L N+ LN ++ V++ D G ++ K E D+ + ++ A+++ G
Sbjct: 311 DLGM--QPNLIVLNSLVNGFVDMMDRDGVDEVLKLMEEFQIRPDVITYSTIMNAWSQAGF 368
Query: 350 LENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPS 409
LE +E+ + G P+A + I + Y+R +M+ A + L +G P+
Sbjct: 369 LEKCKEIYNNMLKSGVKPDAHAYSILAKGYVRAQEMEKAEEMLTVMTKSGVH------PN 422
Query: 410 SETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAA 458
T + + +D A + + + ++ FE LI YA A
Sbjct: 423 VVIFTTVISGWCSVGRMDNAMRVFDKMGEFGVSPNLKTFETLIWGYAEA 471
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/332 (19%), Positives = 131/332 (39%), Gaps = 43/332 (12%)
Query: 129 LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS 188
++N K ++A + + + E S + +L+ + + I +I+ ++
Sbjct: 78 VMNILIKSGKPQEAIVIFQNLIEGGHQPSLATYTTLLNALTTQKYFKPIHSIVSLVEEKQ 137
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
+ PDS +N + A A ++ A++V+++MK G + T++ L Y AG +++
Sbjct: 138 MKPDSIFFNALINAFAESGNMEDAKKVVQKMKESG-LKPSACTYNTLIKGYGIAGKPDES 196
Query: 249 ERALKELENR-NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 307
+ L + N +L Y LI + N+SE + +
Sbjct: 197 MKLLDLMSTEGNVKPNLKTYNMLIRALCKMENISEAWNV--------------------- 235
Query: 308 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
+K SG D+ N + AYA+ G+ AE + +R P
Sbjct: 236 -------------VYKMTASGMQP-DVVTFNTIATAYAQNGKTAQAEAMILEMQRNSLKP 281
Query: 368 NAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVD 427
N +T I Y R G ++ A+ + + D G P+ + + + F D D
Sbjct: 282 NERTCTIIISGYCREGKVQEALRFVYRMKDLG------MQPNLIVLNSLVNGFVDMMDRD 335
Query: 428 GAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
G + L+++++ V + ++ ++ AG
Sbjct: 336 GVDEVLKLMEEFQIRPDVITYSTIMNAWSQAG 367
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 176/399 (44%), Gaps = 30/399 (7%)
Query: 12 NIAKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLK-------- 63
+I SK E A L KK SV LN FL+S ++E DTL+
Sbjct: 120 SICSESKMVSESAELYMLMKKDGVLPSV-ASLNLFLESLVSTKRYE--DTLQLFSEIVES 176
Query: 64 KLRDRKLYYP--------------ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAA 109
LR + Y A++L M++ G++ V + + + K + + A
Sbjct: 177 GLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDA 236
Query: 110 ENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTL 167
E F ++ + + N +TY +L++ YCK E+A + E+MK N+ + + FNSL+
Sbjct: 237 EKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNG 296
Query: 168 YAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAA 227
+ E+ +++EM+ +PD +TY ++ + + EE R G
Sbjct: 297 LCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQIL 356
Query: 228 DWTTFSNLASIYVEAGLFEKAERALKE-LENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
D+T S L + + G EKAE LK+ LEN A + + ++ Y Q G++++ Y
Sbjct: 357 DYTC-SILLNALCKEGNMEKAEEVLKKFLENGLAPVGV-FFNTIVNGYCQVGDINKAYTT 414
Query: 287 WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAK 346
+ +++Y ++++ +K++ AEKC K+ ++ N +I Y +
Sbjct: 415 IEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGR 474
Query: 347 EGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 385
+ ++ E ++G PN ++ + ++ ++
Sbjct: 475 SCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANI 513
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 111/254 (43%), Gaps = 2/254 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N ++YG L+NC CK+ +AE +L M + ++ +N L+ G +
Sbjct: 496 NVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFF 555
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EM A I+P TYN+ + L + AE + E+ R G ++ D T+++L S Y
Sbjct: 556 DEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKG-LSFDVITYNSLISGYSS 614
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
AG +KA + ++ L+ Y LI G+ G L V +I++ + +
Sbjct: 615 AGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEG-LVLVEKIYQEMLQMNLVPDRVI 673
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I V D+ A E+ D N +I + KEGR+ + L +
Sbjct: 674 YNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMK 733
Query: 362 RRGADPNAKTWEIF 375
RG P +T++I
Sbjct: 734 IRGLIPKTETYDIL 747
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 111/247 (44%), Gaps = 10/247 (4%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY L+N CK+ +AE L ++ L F + +NSL++ Y+ G+ +K + +
Sbjct: 568 VTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYET 627
Query: 184 MKASSIMPDSYTYNVWMRALAAVN--DISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
MK S I P T N + R +A + E++ +EM + V D ++ L YVE
Sbjct: 628 MKKSGIKP---TLNTYHRLIAGCGKEGLVLVEKIYQEMLQMNLVP-DRVIYNALIHCYVE 683
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTAN 299
G +KA +E + D Y LI + + G + +V + +++ P T
Sbjct: 684 HGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTE- 742
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+Y +I LKD GA ++E T + + + +I +EGR +A+ +
Sbjct: 743 -TYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDADVICSE 801
Query: 360 ARRRGAD 366
+G D
Sbjct: 802 MNMKGKD 808
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/342 (19%), Positives = 133/342 (38%), Gaps = 41/342 (11%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
NH+TY SL+ +C+ E+AE ++KM E + + +N+L+ Y ++ ++ I+
Sbjct: 426 NHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQIL 485
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG------------------ 223
+EM+ + P+ +Y + L +I AE ++ +M G
Sbjct: 486 EEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIA 545
Query: 224 ----------------RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAY 267
+ T++ L + + G +AE E+ + D+ Y
Sbjct: 546 GKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITY 605
Query: 268 QFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES 327
LI+ Y GN+ + ++ +++ + +Y +I + L EK ++E
Sbjct: 606 NSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAG-CGKEGLVLVEKIYQEMLQ 664
Query: 328 GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKL 387
D + N +I Y + G ++ A L +G P+ T+ + + G M
Sbjct: 665 MNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHK 724
Query: 388 AVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 429
+ + G +P +ET + + KD DGA
Sbjct: 725 VKNLVNDMKIRG------LIPKTETYDILIVGHCKLKDFDGA 760
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/357 (20%), Positives = 138/357 (38%), Gaps = 57/357 (15%)
Query: 138 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 197
M K + +L + LNL S+ T E + E+ S + PD + Y
Sbjct: 136 MLMKKDGVLPSVASLNLFLESL---------VSTKRYEDTLQLFSEIVESGLRPDQFMYG 186
Query: 198 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 257
++A + D+ A ++ MKR G V+ ++ + + + AE+ E+ +
Sbjct: 187 KAIQAAVKLGDLKRAIELMTCMKRGG-VSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLD 245
Query: 258 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 317
R + Y LI Y + G L E + I +++ I++ +++ L + +
Sbjct: 246 RRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEE 305
Query: 318 AEKCFKEWES------------------GCATYDIRVT-----------------NVMIG 342
A++ +E E C D +T ++++
Sbjct: 306 AQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLN 365
Query: 343 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGD 402
A KEG +E AEE+ ++ G P + + Y + GD+ A +EK G
Sbjct: 366 ALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVG--- 422
Query: 403 GGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDD---LGVEVFEPLIRTYA 456
P+ T + ++ F + K+++ AE + +KK V+ VE + LI Y
Sbjct: 423 ---LRPNHVTYNSLVKKFCEMKNMEEAE---KCIKKMVEKGVLPNVETYNTLIDGYG 473
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKV--QGIDAAENYFVDLPETS--KNHLTYGSL 129
AL+L E M+K G+ T++ + L+A +G+ E + ++ + + + + Y +L
Sbjct: 621 ALELYETMKKSGIKPTLNT---YHRLIAGCGKEGLVLVEKIYQEMLQMNLVPDRVIYNAL 677
Query: 130 LNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
++CY + +KA +L M+ + M +N L+ + K G K+ ++ +MK +
Sbjct: 678 IHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGL 737
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
+P + TY++ + + D GA EM +G
Sbjct: 738 IPKTETYDILIVGHCKLKDFDGAYVWYREMFENG 771
>gi|387219245|gb|AFJ69331.1| putative udp-glucosyltransferase, partial [Nannochloropsis gaditana
CCMP526]
Length = 521
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 119/273 (43%), Gaps = 14/273 (5%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKE-----------LNLGFSSMPFNSLMTLYAKTG 172
+TY +L++ Y TE AEA+L +M E L + + M + +LMT YA G
Sbjct: 229 VTYTTLMHAYAGRGDTEGAEAVLRRMLEGEGGRVREEEVLRVLPNVMTYTTLMTAYAAGG 288
Query: 173 HPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTF 232
E A+++ M+ + I P+ TY V M A D+ GAE V+ M VA + T+
Sbjct: 289 DVEGSEAVLERMEEACIAPNVMTYTVLMTAYTLRGDVKGAEGVLRRMI-SAYVAPNANTY 347
Query: 233 SNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL 292
+ L Y G AE L +E + L+T+Y G + + +
Sbjct: 348 TTLLHAYTVNGNAAGAEEVLARMEAAGVLPTALTFATLMTVYAARGEVESAKGVLARMEA 407
Query: 293 AFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVT-NVMIGAYAKEGRLE 351
A +++ ++ V D+ GAE+ + E+ A D +T N ++ YA +G +
Sbjct: 408 AGVGPTAMAFDTLLNAYVVAGDVGGAEQVLRRREA-EAYPDFPLTYNTLMNGYADKGDVA 466
Query: 352 NAEELKERARRRGADPNAKTWEIFSDYYLRNGD 384
AE + R R +G P+ T Y GD
Sbjct: 467 GAEGVLARMRAKGVGPDETTLSTLLHAYAEAGD 499
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 128/311 (41%), Gaps = 20/311 (6%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM- 219
F+++M +YA PE ++ + A ++PD TY M A A D GAE V+ M
Sbjct: 196 FHTVMKVYADERDPEGAEMVLGWLLARGLLPDVVTYTTLMHAYAGRGDTEGAEAVLRRML 255
Query: 220 KRDG---------RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 270
+ +G RV + T++ L + Y G E +E L+ +E ++ Y L
Sbjct: 256 EGEGGRVREEEVLRVLPNVMTYTTLMTAYAAGGDVEGSEAVLERMEEACIAPNVMTYTVL 315
Query: 271 ITLYGQTGNLSEVYRIWRSLRLAF--PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESG 328
+T Y G++ + R + A+ PN AN +Y ++ + GAE+ E+
Sbjct: 316 MTAYTLRGDVKGAEGVLRRMISAYVAPN-AN-TYTTLLHAYTVNGNAAGAEEVLARMEAA 373
Query: 329 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 388
++ YA G +E+A+ + R G P A ++ + Y+ GD+ A
Sbjct: 374 GVLPTALTFATLMTVYAARGEVESAKGVLARMEAAGVGPTAMAFDTLLNAYVVAGDVGGA 433
Query: 389 VDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVF 448
L R + + T T M + + DV GAEG L ++
Sbjct: 434 EQVLR------RREAEAYPDFPLTYNTLMNGYADKGDVAGAEGVLARMRAKGVGPDETTL 487
Query: 449 EPLIRTYAAAG 459
L+ YA AG
Sbjct: 488 STLLHAYAEAG 498
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 107/237 (45%), Gaps = 3/237 (1%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
N +TY +L+ Y E +EA+LE+M+E + + M + LMT Y G + +
Sbjct: 272 PNVMTYTTLMTAYAAGGDVEGSEAVLERMEEACIAPNVMTYTVLMTAYTLRGDVKGAEGV 331
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
++ M ++ + P++ TY + A + +GAE V+ M+ G V TF+ L ++Y
Sbjct: 332 LRRMISAYVAPNANTYTTLLHAYTVNGNAAGAEEVLARMEAAG-VLPTALTFATLMTVYA 390
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL-AFPNTAN 299
G E A+ L +E A+ L+ Y G++ ++ R A+P+
Sbjct: 391 ARGEVESAKGVLARMEAAGVGPTAMAFDTLLNAYVVAGDVGGAEQVLRRREAEAYPDFP- 449
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
++Y ++ + D+ GAE + D + ++ AYA+ G AE +
Sbjct: 450 LTYNTLMNGYADKGDVAGAEGVLARMRAKGVGPDETTLSTLLHAYAEAGDPLGAEAV 506
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 114/285 (40%), Gaps = 36/285 (12%)
Query: 178 PAIIQEMKA-SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLA 236
PA +E +A + PD T++ M+ A D GAE V+ + G + D T++ L
Sbjct: 177 PAEDEERRAVCDLSPDLPTFHTVMKVYADERDPEGAEMVLGWLLARG-LLPDVVTYTTLM 235
Query: 237 SIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL--SEVYRIWRSLRLAF 294
Y G E AE L+ + L G+ G + EV R+
Sbjct: 236 HAYAGRGDTEGAEAVLRRM-----------------LEGEGGRVREEEVLRV-------L 271
Query: 295 PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAE 354
PN ++Y ++ D+ G+E + E C ++ V++ AY G ++ AE
Sbjct: 272 PNV--MTYTTLMTAYAAGGDVEGSEAVLERMEEACIAPNVMTYTVLMTAYTLRGDVKGAE 329
Query: 355 ELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIR 414
+ R PNA T+ Y NG+ A + L R + +P++ T
Sbjct: 330 GVLRRMISAYVAPNANTYTTLLHAYTVNGNAAGAEEVL------ARMEAAGVLPTALTFA 383
Query: 415 TFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
T M + +V+ A+G L ++ A F+ L+ Y AG
Sbjct: 384 TLMTVYAARGEVESAKGVLARMEAAGVGPTAMAFDTLLNAYVVAG 428
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 47/128 (36%), Gaps = 35/128 (27%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPF---------------------- 161
LT+ +L+ Y E A+ +L +M+ +G ++M F
Sbjct: 380 LTFATLMTVYAARGEVESAKGVLARMEAAGVGPTAMAFDTLLNAYVVAGDVGGAEQVLRR 439
Query: 162 -------------NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVND 208
N+LM YA G ++ M+A + PD T + + A A D
Sbjct: 440 REAEAYPDFPLTYNTLMNGYADKGDVAGAEGVLARMRAKGVGPDETTLSTLLHAYAEAGD 499
Query: 209 ISGAERVI 216
GAE V+
Sbjct: 500 PLGAEAVL 507
>gi|302798621|ref|XP_002981070.1| hypothetical protein SELMODRAFT_444770 [Selaginella moellendorffii]
gi|300151124|gb|EFJ17771.1| hypothetical protein SELMODRAFT_444770 [Selaginella moellendorffii]
Length = 1138
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 181/408 (44%), Gaps = 17/408 (4%)
Query: 90 VSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKM 149
+ D + +D+ + + I A+ F L K Y ++ + + M A+ K
Sbjct: 146 LDDVILRMDMAVRAKKIRRAQKIFKKLQAWEKTTDAYNTMFLIFSQRKMILHADDFYYKF 205
Query: 150 KELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDI 209
KE L + + F+ L LY + G K+ + ++++A+ + P N M + ++ I
Sbjct: 206 KEAKLKPNDITFSILACLYRRCGLHNKVVRLQEDIEAAGMKPCVCFLNNLMVSKYELHGI 265
Query: 210 SGAERVIEEMKRDGR--VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS-- 265
S AE + ++ G + +T+S +A+ Y+ AG+ +KA+ L+ +E
Sbjct: 266 SSAEEIFNQLVPAGSDLKRSHLSTYSMMAASYLSAGMHDKAQNLLEVIEKAMDQGSFPKL 325
Query: 266 --AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 323
Y LI++Y N + R+W+ + + Y+ MI+ ++ AEK FK
Sbjct: 326 RRTYHILISMYSTMKNRDGMERVWKKIE----DLKAQDYVAMIESCGRADEVGSAEKYFK 381
Query: 324 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE--IFSDYYLR 381
E + + ++G YA +G+ + AE+L ++ + + +A + I ++ R
Sbjct: 382 EADRKGLLNQPSLFAALLGVYAGKGQADKAEKLFKKMKEQDVSRDALCYHYIILANLNAR 441
Query: 382 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK-DVDGAEGFLEILKKAV 440
N D AV+ LE A G D G+ P T ++ +E DV AE L +K
Sbjct: 442 NIDR--AVEILELAEAAGMRD-GRSRPFLGTFCDVLKTIARETGDVALAETLLADWRKGK 498
Query: 441 DDLGVEVFEPLIRTYAAAGR-TSPVMLRRLKMEKVEVSEASKKLLEAI 487
+ V+ L+R Y AG+ L+RL ++ + + +LL+ +
Sbjct: 499 YRTDIAVYNHLLRVYLKAGKQVQGPFLKRLAGNNMKPTRETHQLLQQL 546
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 167/408 (40%), Gaps = 11/408 (2%)
Query: 84 RGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAE 143
R T D +DL ++ + AE F L ++ + Y +LL Y K+ +AE
Sbjct: 727 RPFTLTTKDNIFRMDLASRCGSVGKAERIFERLAPEHRSEVAYNALLLSYTKKKKRGRAE 786
Query: 144 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 203
L +++K S N L ++Y + ++ + +E + + D YN+ + A
Sbjct: 787 RLFKELKATGTISSCYSLNLLASMYRQLRLDAEVLMLAKEAQKLGVELDMCFYNLLLPAK 846
Query: 204 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG----LFEKAERALKELENRN 259
V + E++ + R + T +A+IYV AG + E E + +E
Sbjct: 847 FRVQGLEDVEKLYATIT-SPRDRTRFFTCLAMANIYVSAGRNDKVLEMLELIDQGMEAGT 905
Query: 260 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF-PNTANISYLNMIQVLVNLKDLPGA 318
+ Y LI++Y + + V R W L+ PNT + Y +I+ L + A
Sbjct: 906 IVKQRRRYNVLISMYASLEDGARVERTWERLKQQRQPNTED--YCCIIRAWGKLGHVVRA 963
Query: 319 EKCFKEWESGCATYDIR-VTNVMIGAYAKEGRLENAEELKERARRR-GADPNAKTWEIFS 376
E F+ E+ + V N M+ Y+ G E AE L R G + +
Sbjct: 964 ETIFQVAEANEKSLKYSTVFNAMMFVYSVAGMREEAEGLVRRMEYELGVKLDPWCYHHLV 1023
Query: 377 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 436
Y + GD+ + L A G+ + ++ P + T+ + DVD AE L
Sbjct: 1024 LLYAKAGDIGKMLSTLRAAQACGKKE-RRFTPLAATLWAALNTLADAGDVDTAEETLTRW 1082
Query: 437 KKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 484
K++ + ++ L+R + A R + + R+ + V + ++KL
Sbjct: 1083 KRSGYRVTTGLYNRLLRAHLVAARPTERFVERMLADGVVPNGETEKLF 1130
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 75/383 (19%), Positives = 152/383 (39%), Gaps = 31/383 (8%)
Query: 23 EALYDRLFKKGSSDVSVRQQLNQFLKSKK-----RVFK-----------WEVGDTLKKLR 66
E +++RL + S+V+ L + K KK R+FK + + R
Sbjct: 753 ERIFERLAPEHRSEVAYNALLLSYTKKKKRGRAERLFKELKATGTISSCYSLNLLASMYR 812
Query: 67 DRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL--PETSKNHL 124
+L L L++ +K G+ + + L +VQG++ E + + P
Sbjct: 813 QLRLDAEVLMLAKEAQKLGVELDMCFYNLLLPAKFRVQGLEDVEKLYATITSPRDRTRFF 872
Query: 125 TYGSLLNCYCKELMTEKAEALLE----KMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
T ++ N Y +K +LE M+ + +N L+++YA ++
Sbjct: 873 TCLAMANIYVSAGRNDKVLEMLELIDQGMEAGTIVKQRRRYNVLISMYASLEDGARVERT 932
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
+ +K P++ Y +RA + + AE + + + + + T F+ + +Y
Sbjct: 933 WERLKQQR-QPNTEDYCCIIRAWGKLGHVVRAETIFQVAEANEKSLKYSTVFNAMMFVYS 991
Query: 241 EAGLFEKAERALKELENR-NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
AG+ E+AE ++ +E D Y L+ LY + G++ ++ R+ +
Sbjct: 992 VAGMREEAEGLVRRMEYELGVKLDPWCYHHLVLLYAKAGDIGKMLSTLRAAQACGKKERR 1051
Query: 300 ISYL-----NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAE 354
+ L + L + D+ AE+ W+ + N ++ A+ R E
Sbjct: 1052 FTPLAATLWAALNTLADAGDVDTAEETLTRWKRSGYRVTTGLYNRLLRAHLVAAR--PTE 1109
Query: 355 ELKERARRRGADPNAKTWEIFSD 377
ER G PN +T ++F++
Sbjct: 1110 RFVERMLADGVVPNGETEKLFNE 1132
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 136/308 (44%), Gaps = 9/308 (2%)
Query: 114 VDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGH 173
+D ++ + ++Y ++++ YC +KA L++ M+ L + +NS++ L K G
Sbjct: 284 MDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGK 343
Query: 174 PEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFS 233
+ +++EM + I+PD+ Y + + + A + +EM +++ D+ T++
Sbjct: 344 SFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEM-LSKKISPDYITYT 402
Query: 234 NLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 293
L + + G + + E+ +R D Y LI +Y + G + + + + +
Sbjct: 403 TLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEM-VQ 461
Query: 294 FPNTANI-SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLEN 352
T NI +Y +I L +L A + E ++ + N M+ K G +E
Sbjct: 462 MGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQ 521
Query: 353 AEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSET 412
A +L + G DP+A T+ D Y R GD+ A L++ +D G P+ T
Sbjct: 522 AIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQ------PTVVT 575
Query: 413 IRTFMRHF 420
M F
Sbjct: 576 FNVLMNGF 583
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 132/278 (47%), Gaps = 1/278 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
+ N +TYG+L++ CK + A LL++M++ L + +NS++ K G+ E+
Sbjct: 465 TPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIK 524
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+++EM+ + I PD+ TY + A + DI A ++++EM G + TF+ L + +
Sbjct: 525 LMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRG-LQPTVVTFNVLMNGF 583
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
G+ E +R L + + D Y L+ + +++ +I++ +R +
Sbjct: 584 CMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDS 643
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+Y +I+ ++L A +KE + N +I + K+ + A EL E
Sbjct: 644 NTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEE 703
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
R G + + + F D GD+++ ++ ++AI+
Sbjct: 704 MRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIE 741
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 160/388 (41%), Gaps = 11/388 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAK-VQGIDAAENYFVDLPETSKNHLTYGSLLNC 132
A KL + + G+ TV L +A +GI+ A F + S N +Y ++
Sbjct: 209 ARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCEYG-ISWNTTSYNIIIYS 267
Query: 133 YCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPD 192
C+ ++A LL +M + + +++++ Y G +K ++ +M+ + P+
Sbjct: 268 LCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPN 327
Query: 193 SYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERAL 252
YTYN + L + AE+V+ EM ++ D ++ L + + G A +
Sbjct: 328 RYTYNSIILLLCKIGKSFEAEKVLREMMSQ-KIIPDNVVYTTLIHGFFKLGHVRTANKWF 386
Query: 253 KELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNL 312
E+ ++ D Y LI +GQ G + E ++ + ++Y +I V
Sbjct: 387 DEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKA 446
Query: 313 KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
++ A E T +I +I K G L+ A EL + R++G N +
Sbjct: 447 GEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIY 506
Query: 373 EIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGF 432
+ + G+++ A+ L K ++ D P + T T + + + D+D A
Sbjct: 507 NSMVNGICKAGNIEQAIK-LMKEMEVAGID-----PDAITYTTVIDAYCRLGDIDKAHKL 560
Query: 433 L-EILKKAVDDLGVEVFEPLIRTYAAAG 459
L E+L + + V F L+ + G
Sbjct: 561 LQEMLDRGLQP-TVVTFNVLMNGFCMLG 587
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 134/308 (43%), Gaps = 11/308 (3%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY L+N CK + E+A +L +M L +S+ +N L+ + ++
Sbjct: 424 NVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLL 483
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EM PD +TYN + L V+ I A R+ M DG VA + T++ L +
Sbjct: 484 SEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANN-VTYNTLIHALLR 542
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G F+KA + ++ R D Y LI + + GN+ + ++ + + IS
Sbjct: 543 RGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTIS 602
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
MI L + + A + ++ + DI N ++ K GR++ A L +R +
Sbjct: 603 CNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQ 662
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSET----IRTFM 417
G P+A T+ F + + G + A + I+ G +VPS+ T + T +
Sbjct: 663 VEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENG------FVPSNLTWNVLVYTLL 716
Query: 418 RHFEQEKD 425
+ QE +
Sbjct: 717 KQSNQENN 724
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 106/278 (38%), Gaps = 41/278 (14%)
Query: 108 AAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLM 165
A N F D+ S T+G ++ C + A +LL M + +S+ + +L+
Sbjct: 201 VATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLI 260
Query: 166 TLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRV 225
++ + +++EM MPD T+N + L VN I A ++++ M G
Sbjct: 261 HALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRG-F 319
Query: 226 AADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 285
D T+ L G +A + L ++ N + LI Y +G L E
Sbjct: 320 YPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNN----AILNTLINGYVMSGQLKEAQ- 374
Query: 286 IWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 345
S+LN + ++N P DI N+++
Sbjct: 375 ---------------SFLN--ETMINFGFQP----------------DIFTYNILMHGLC 401
Query: 346 KEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
KEG L A +L RRG +PN T+ I + + G
Sbjct: 402 KEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAG 439
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 136/308 (44%), Gaps = 9/308 (2%)
Query: 114 VDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGH 173
+D ++ + ++Y ++++ YC +KA L++ M+ L + +NS++ L K G
Sbjct: 284 MDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGK 343
Query: 174 PEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFS 233
+ +++EM + I+PD+ Y + + + A + +EM +++ D+ T++
Sbjct: 344 SFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEM-LSKKISPDYITYT 402
Query: 234 NLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 293
L + + G + + E+ +R D Y LI +Y + G + + + + +
Sbjct: 403 TLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEM-VQ 461
Query: 294 FPNTANI-SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLEN 352
T NI +Y +I L +L A + E ++ + N M+ K G +E
Sbjct: 462 MGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQ 521
Query: 353 AEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSET 412
A +L + G DP+A T+ D Y R GD+ A L++ +D G P+ T
Sbjct: 522 AIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQ------PTVVT 575
Query: 413 IRTFMRHF 420
M F
Sbjct: 576 FNVLMNGF 583
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 133/278 (47%), Gaps = 1/278 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
+ N +TYG+L++ CK + A LL++M++ L + +NS++ K G+ E+
Sbjct: 465 TPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIK 524
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+++EM+ + I PD+ TY + A + DI A ++++EM G + TF+ L + +
Sbjct: 525 LMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRG-LQPTVVTFNVLMNGF 583
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
G+ E +R L + + D Y L+ + +++ +I++ +R +
Sbjct: 584 CMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDS 643
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+Y +I+ ++L A +KE + N +I + K+ ++ A EL E
Sbjct: 644 NTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEE 703
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
R G + + + F D GD+++ ++ ++AI+
Sbjct: 704 MRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIE 741
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 160/388 (41%), Gaps = 11/388 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAK-VQGIDAAENYFVDLPETSKNHLTYGSLLNC 132
A KL + + G+ TV L +A +GI+ A F + S N +Y ++
Sbjct: 209 ARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCEYG-ISWNTTSYNIIIYS 267
Query: 133 YCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPD 192
C+ ++A LL +M + + +++++ Y G +K ++ +M+ + P+
Sbjct: 268 LCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPN 327
Query: 193 SYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERAL 252
YTYN + L + AE+V+ EM ++ D ++ L + + G A +
Sbjct: 328 RYTYNSIILLLCKIGKSFEAEKVLREMMSQ-KIIPDNVVYTTLIHGFFKLGHVRTANKWF 386
Query: 253 KELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNL 312
E+ ++ D Y LI +GQ G + E ++ + ++Y +I V
Sbjct: 387 DEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKA 446
Query: 313 KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
++ A E T +I +I K G L+ A EL + R++G N +
Sbjct: 447 GEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIY 506
Query: 373 EIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGF 432
+ + G+++ A+ L K ++ D P + T T + + + D+D A
Sbjct: 507 NSMVNGICKAGNIEQAIK-LMKEMEVAGID-----PDAITYTTVIDAYCRLGDIDKAHKL 560
Query: 433 L-EILKKAVDDLGVEVFEPLIRTYAAAG 459
L E+L + + V F L+ + G
Sbjct: 561 LQEMLDRGLQP-TVVTFNVLMNGFCMLG 587
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 150/326 (46%), Gaps = 3/326 (0%)
Query: 76 KLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLNCY 133
K ++M G+ ++V I +D + K ++ A + F + E + + +TY SL++ +
Sbjct: 241 KFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGH 300
Query: 134 CKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDS 193
K + ++ + E+MK+ + + +N+L+ + K K + EMKA+ + P+
Sbjct: 301 GKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNV 360
Query: 194 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 253
TY+ ++ A + A + +M+R ++T +++L +AG +A + ++
Sbjct: 361 VTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFT-YTSLIDANCKAGNLAEALKLVE 419
Query: 254 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLK 313
E+ ++ Y L+ + G + E ++R++ A +Y ++ + K
Sbjct: 420 EILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAK 479
Query: 314 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 373
++ A+ KE + C D+ + ++ E RLE A+ L + G + NA +
Sbjct: 480 EMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYT 539
Query: 374 IFSDYYLRNGDMKLAVDCLEKAIDTG 399
D Y ++G A+ LE+ +D G
Sbjct: 540 TLMDAYFKSGQATEALTLLEEMLDLG 565
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 121/301 (40%), Gaps = 7/301 (2%)
Query: 138 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 197
M E+A KM++ + N+L+ +K G + ++M A+ I +TYN
Sbjct: 200 MLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYN 259
Query: 198 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 257
+ + L D+ A + +MK G D T+++L + + GL ++ +++++
Sbjct: 260 IMIDYLCKEGDLEMARSLFTQMKEAG-FTPDIVTYNSLIDGHGKLGLLDECICIFEQMKD 318
Query: 258 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 317
+ D+ Y LI + + + + + ++ ++Y I L
Sbjct: 319 ADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQE 378
Query: 318 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 377
A K F + T + +I A K G L A +L E + G N T+ D
Sbjct: 379 AIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLD 438
Query: 378 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 437
G MK A + ++ G P+ ET + F + K+++ A+ L+ +K
Sbjct: 439 GLCEEGRMKEAEEVFRAMLNAGVA------PNQETYTALVHGFIKAKEMEYAKDILKEMK 492
Query: 438 K 438
+
Sbjct: 493 E 493
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 106/247 (42%), Gaps = 13/247 (5%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
L YG++L C E E+A+ L+ ++KE + +++ + +LM Y K+G + +++E
Sbjct: 501 LLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEE 560
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA-----ADWTTFSNLASI 238
M ++ TY A ++ + + V E M GR++ + ++ L
Sbjct: 561 MLDLGLIATEVTY------CALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDG 614
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW-RSLRLAFPNT 297
+ FE A++ E+ ++ D AY LI + GNL E + R + +
Sbjct: 615 LCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELD 674
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
+ +Y +I L + + A E D V +I Y G+++ A EL+
Sbjct: 675 LH-AYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQ 733
Query: 358 ERARRRG 364
+RG
Sbjct: 734 NEMAKRG 740
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 71/354 (20%), Positives = 140/354 (39%), Gaps = 27/354 (7%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL--PETSKNHLTYGSLLN 131
ALKL E + + G+ V LD + + + AE F + + N TY +L++
Sbjct: 414 ALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVH 473
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ K E A+ +L++MKE + + + +++ E+ +I E+K S I
Sbjct: 474 GFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINT 533
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
++ Y M A + A ++EEM G +A + T+ L ++GL ++A
Sbjct: 534 NAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATE-VTYCALIDGLCKSGLVQEAMHH 592
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI----- 306
+ +++ Y L+ + +++ + I+Y +I
Sbjct: 593 FGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMK 652
Query: 307 ----QVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
Q +NL+D + E G D+ +I + G+++ A L +
Sbjct: 653 HGNLQEALNLRD--------RMIEIG-MELDLHAYTALIWGLSHSGQVQKARNLLDEMIG 703
Query: 363 RGADPNAKTWEIFSDYYLRNGD----MKLAVDCLEKAIDTGRGDGGKWVPSSET 412
+G P+ + Y G ++L + ++ + TG D VPS +T
Sbjct: 704 KGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMITGLSDHA--VPSVQT 755
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 152/359 (42%), Gaps = 13/359 (3%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGF--SSMPFNSLMTLYAKTGHPEKI 177
S +T L+N YCK M +AL KE+ GF + +N+ + + GH
Sbjct: 262 SPTRVTVNVLINGYCK--MGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHA 319
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
++ M PD +TYN + L+ ++ A+ ++ +M G D TTF+ L
Sbjct: 320 LKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRG-CLPDTTTFNTLIV 378
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
E+A +EL + D+ + LI + G+ R++ ++ +
Sbjct: 379 ALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAP 438
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
++Y +I L ++ L A KE ES N +I A K+ R+E AEE+
Sbjct: 439 DEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVF 498
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 417
++ G +A T+ D + + A + +E+ + G PS+ T + +
Sbjct: 499 DQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEG------LQPSNITYNSIL 552
Query: 418 RHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPV--MLRRLKMEKV 474
H+ ++ D+ A LE + ++ V + LI AGRT +LR ++++ +
Sbjct: 553 THYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGI 611
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 2/152 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
AL L + ME G ++ +D + K I+ AE F +D S++ +T+ +L++
Sbjct: 459 ALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLID 518
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK + A L+E+M + L S++ +NS++T Y K G +K I++ M A+
Sbjct: 519 GLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEI 578
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
D TY + L A +++ M+ G
Sbjct: 579 DVVTYGTLINGLCKAGRTQVALKLLRGMRIKG 610
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 107/276 (38%), Gaps = 3/276 (1%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
Y LLN + + E++ +M + + + N+L+ + +++EM
Sbjct: 162 VYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEM 221
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ ++ PD T+ M+ I A RV +M G + T + L + Y + G
Sbjct: 222 SSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETG-CSPTRVTVNVLINGYCKMGR 280
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
E A +++ D Y + Q G++S ++ + + +Y
Sbjct: 281 VEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNT 340
Query: 305 MIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I L +L A+ + + GC D N +I A + RLE A +L +
Sbjct: 341 VINCLSKNGELDEAKGIVNQMVDRGCLP-DTTTFNTLIVALCSQNRLEEALDLARELTVK 399
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
G P+ T+ I + + GD L + E+ +G
Sbjct: 400 GLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSG 435
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 83/194 (42%), Gaps = 2/194 (1%)
Query: 79 ENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKE 136
+ M+ G++++ +D + K + ID A + + +++TY S+L YCK+
Sbjct: 499 DQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQ 558
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 196
+KA +LE M + + +L+ K G + +++ M+ I P Y
Sbjct: 559 GDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAY 618
Query: 197 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 256
N +++L N++ A + EM G T + G ++A L E+
Sbjct: 619 NPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMV 678
Query: 257 NRNAHRDLSAYQFL 270
N+ + S+++ L
Sbjct: 679 NKGFMPEFSSFRML 692
>gi|168000162|ref|XP_001752785.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695948|gb|EDQ82289.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 482
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 133/333 (39%), Gaps = 41/333 (12%)
Query: 142 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 201
AE +M+E+ L + F SL+ +A+TG+ + +I QEM + P TY V++
Sbjct: 126 AELSFTEMREVGLEPNVACFTSLLEAHARTGNFVRAESIYQEMLKTGPAPTEVTYQVYIN 185
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK-------------- 247
AL + AER+ + + D ++ + Y +AG F +
Sbjct: 186 ALCKAERFNDAERIFKCLDESAEAKPDARLYNLMLHTYGKAGKFSEQQALFRQMKGAGVP 245
Query: 248 ------------------AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS 289
AE L+ ++ D+ Y LI Y + + E + ++R
Sbjct: 246 MTVVTFNSLMAFQKTVADAEACLRHMQAAKIKPDVITYTGLINAYSKARRVEEAHVVFRE 305
Query: 290 LRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGR 349
+ + + I+Y ++ K++ GAE FK DIR ++ AYA G
Sbjct: 306 MVASGLRPSRIAYNTLLDAYAKCKEVEGAESLFKSMGQDRCRPDIRSYTTLLAAYANTGN 365
Query: 350 LENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPS 409
++ AE L +R ++ G +PN T+ Y D+ + E G P+
Sbjct: 366 MKKAERLLKRMKQAGLEPNVVTYGTLMQGYTSVHDINAMLQTFEDLQKAGIK------PN 419
Query: 410 SETIRTFMRHFEQEKDVDGAEGFLEILKKAVDD 442
S +R F Q++D + A L KK +D
Sbjct: 420 STIFTLLVRTFGQQEDFESA---LSWFKKMLDS 449
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 2/129 (1%)
Query: 97 LDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNL 154
LD AK + ++ AE+ F + + + +Y +LL Y +KAE LL++MK+ L
Sbjct: 322 LDAYAKCKEVEGAESLFKSMGQDRCRPDIRSYTTLLAAYANTGNMKKAERLLKRMKQAGL 381
Query: 155 GFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAER 214
+ + + +LM Y + ++++ + I P+S + + +R D A
Sbjct: 382 EPNVVTYGTLMQGYTSVHDINAMLQTFEDLQKAGIKPNSTIFTLLVRTFGQQEDFESALS 441
Query: 215 VIEEMKRDG 223
++M G
Sbjct: 442 WFKKMLDSG 450
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 147/350 (42%), Gaps = 12/350 (3%)
Query: 87 NKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALL 146
+K V I L ++ ++ A F ++ + + +TYG L++ YC E A LL
Sbjct: 259 DKNVCSYNILLKVLCGAGRVEDARQLFDEM-ASPPDVVTYGILIHGYCALGELENAVKLL 317
Query: 147 EKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV 206
+ M + ++ + S++ L G ++++M ++ D Y +
Sbjct: 318 DDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNK 377
Query: 207 NDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSA 266
D+ A R +EM+R G +A D T++ L + AG ++AE+ L+E+ R D
Sbjct: 378 GDLVSARRWFDEMQRKG-LATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVT 436
Query: 267 YQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 324
Y L+ Y + G ++E +++ ++ R PN ++Y + L D+ A + E
Sbjct: 437 YTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNV--VTYTALSDGLCKQGDVQAANELLHE 494
Query: 325 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 384
+ + N +I K G L+ A G P+ T+ D ++G+
Sbjct: 495 MSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGE 554
Query: 385 MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 434
+ A D L++ +D G P+ T M F V+G + LE
Sbjct: 555 LDRAHDLLQEMLDNG------IKPTIVTYNVLMNGFCMSGRVEGGKKLLE 598
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 84/172 (48%), Gaps = 1/172 (0%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
+ N +TY +L + CK+ + A LL +M L ++ +NSL+ K G+ ++
Sbjct: 465 VAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAM 524
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+ +M A+ + PD YTY + AL ++ A +++EM +G + T++ L +
Sbjct: 525 RTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNG-IKPTIVTYNVLMNG 583
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
+ +G E ++ L+ + +N H + + Y L+ Y N+ I++ +
Sbjct: 584 FCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGM 635
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 130/321 (40%), Gaps = 15/321 (4%)
Query: 74 ALKLSENMEKRGM--NKTVSDQAIHLDLVAKVQGIDAAE------NYFVDLPETSKNHLT 125
A+KL ++M RG+ N TV + L L K + DA ++ V L E
Sbjct: 313 AVKLLDDMVARGVEPNATVYTSVVAL-LCDKGRVSDALTVVEDMVHHKVILDEA-----V 366
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y ++L+ +C + A ++M+ L + + +L+ + G ++ ++QEM
Sbjct: 367 YTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEML 426
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
A + D TY V + ++ A +V M + G VA + T++ L+ + G
Sbjct: 427 ARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRG-VAPNVVTYTALSDGLCKQGDV 485
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
+ A L E+ N+ + Y LI + G L + R + A +Y +
Sbjct: 486 QAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTL 545
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
I L +L A +E I NV++ + GR+E ++L E +
Sbjct: 546 IDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNI 605
Query: 366 DPNAKTWEIFSDYYLRNGDMK 386
PNA T+ Y +MK
Sbjct: 606 HPNATTYNSLMKQYCIGNNMK 626
>gi|302776756|ref|XP_002971525.1| hypothetical protein SELMODRAFT_95815 [Selaginella moellendorffii]
gi|300160657|gb|EFJ27274.1| hypothetical protein SELMODRAFT_95815 [Selaginella moellendorffii]
Length = 356
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 129/289 (44%), Gaps = 8/289 (2%)
Query: 114 VDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGH 173
+D + + + L GS N Y + L ++K + + +N ++ + K G
Sbjct: 61 IDPDDVTYDILVSGSGKNGY-------PIDRLFLEIKSRGVALTLRSYNVVICAFTKEGS 113
Query: 174 PEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFS 233
+K+ +I+EM + PD +++N + A A +V MK G V D T++
Sbjct: 114 IDKVEEVIREMIRQELRPDLFSFNALIAAYAMSRKPERGLQVFSNMKAAG-VLPDIVTYT 172
Query: 234 NLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 293
L ++ + + ++A +E+ D Y L+++YG+ G +++ I+ L+L
Sbjct: 173 TLIQMFSRSAMHKEAIEMFEEMVVNKCQPDFFVYSLLVSVYGKAGLVADALLIFHRLQLE 232
Query: 294 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
++Y ++I ++ L + K F + E+ D+ + N MI AYAK G + +A
Sbjct: 233 GHRPNIVTYTSLISAHLHKGLLEESRKHFSQMEAYGCRADVHLLNTMIDAYAKAGMVNDA 292
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGD 402
L R +G PN ++ I + +L G + A+ + G D
Sbjct: 293 ANLLHRLTAQGVCPNRASYAIIVEGFLHAGHVDEALAAYASMSEAGFKD 341
>gi|302801578|ref|XP_002982545.1| hypothetical protein SELMODRAFT_421999 [Selaginella moellendorffii]
gi|300149644|gb|EFJ16298.1| hypothetical protein SELMODRAFT_421999 [Selaginella moellendorffii]
Length = 1138
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 191/433 (44%), Gaps = 14/433 (3%)
Query: 64 KLRDRKLYYPALKLSENME-KRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKN 122
KLR K AL++++ M + + + D + +D+ + + I A+ F L K
Sbjct: 119 KLRKWKRGSLALEVADWMYYTKQFPQDLDDVILRMDMAVRAKKIRRAQKIFKKLQAWEKT 178
Query: 123 HLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQ 182
Y ++ + + M A+ K KE L + + F+ L LY + G K+ + +
Sbjct: 179 TDAYNTMFLIFSQRKMILHADDFYYKFKEAKLKPNDITFSILACLYRRCGLHNKVVRLQE 238
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGR--VAADWTTFSNLASIYV 240
+++A+ + P N M + ++ IS AE + ++ G + +T+S +A+ Y+
Sbjct: 239 DIEAAGMKPCVCFLNNLMVSKYELHGISSAEEIFNQLVPAGSDLKRSHLSTYSMMAASYL 298
Query: 241 EAGLFEKAERALKELENRNAHRDLS----AYQFLITLYGQTGNLSEVYRIWRSLRLAFPN 296
AG+ +KA+ L+ +E Y LI++Y N + R+W+ + +
Sbjct: 299 SAGMHDKAQNLLEVIEKAMDQGSFPKLRRTYHILISMYSTMKNRDGMERVWKKIE----D 354
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
Y+ MI+ ++ AEK FKE + + ++G YA +G+ + AE+L
Sbjct: 355 LKAQDYVAMIESCGRADEVGSAEKYFKEADRKGLLNQPSLFAALLGVYAGKGQADKAEKL 414
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTF 416
++ + + +A + L ++ AV+ LE A G D G+ P T
Sbjct: 415 FKKMKEQDVSRDALCYHYIILANLNAKNIDRAVEILELAEAAGMRD-GRSRPFLGTFCDV 473
Query: 417 MRHFEQEK-DVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR-TSPVMLRRLKMEKV 474
++ +E DV AE L +K + V+ L+R Y AG+ L+RL +
Sbjct: 474 LKTIAKETGDVALAETLLADWRKGKYRTDIAVYNHLLRVYLKAGKQVQGPFLKRLAGNNM 533
Query: 475 EVSEASKKLLEAI 487
+ + + +LL+ +
Sbjct: 534 KPTRETHQLLQQL 546
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 173/414 (41%), Gaps = 11/414 (2%)
Query: 84 RGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAE 143
R T D +DL ++ + AE F L ++ + Y +LL Y K+ +AE
Sbjct: 727 RPFTLTTKDNIFRMDLASRCGSVGKAERIFERLAPEHRSEVAYNALLLSYTKKKKRGRAE 786
Query: 144 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 203
L +++K S N L ++Y + G ++ + +E + + D YN+ + A
Sbjct: 787 RLFKELKATGTISSCYSLNLLASMYRQLGLDAEVLMLAKEAQKLGVELDMCFYNLLLPAK 846
Query: 204 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG----LFEKAERALKELENRN 259
V + E++ + R + T +A+IYV AG + E E + +E
Sbjct: 847 FRVQGLEEVEKLYATIT-SPRDRTRFFTCLAMANIYVSAGRNDKVLEMLELIDQGMEAGT 905
Query: 260 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF-PNTANISYLNMIQVLVNLKDLPGA 318
+ Y LI++Y + + V R W L+ PNT + Y +I+ L + A
Sbjct: 906 IVKQRRRYNVLISMYASLEDGARVERTWERLKQQRQPNTED--YCCIIRAWGKLGHVVRA 963
Query: 319 EKCFKEWESGCATYDIR-VTNVMIGAYAKEGRLENAEELKERARRR-GADPNAKTWEIFS 376
E F+ E+ + V N M+ Y+ G E AE L +R G + +
Sbjct: 964 ETIFQVAEANEKSLKYSTVFNAMMFVYSVAGMREEAEGLVQRMEYELGVKLDPWCYHHLV 1023
Query: 377 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 436
Y + GD+ + L A G+ + ++ P + T+ + DVD AE L
Sbjct: 1024 LLYAKAGDIGKMLSTLRAAQAGGKKE-RRFTPLAATLWAALNTLADAGDVDTAEETLTRW 1082
Query: 437 KKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAICVE 490
K++ + ++ L+R + A R + + R+ ++ V + ++KL + V+
Sbjct: 1083 KRSGYRVTTGLYNRLLRAHLVAARPTERFVERMLVDGVVPNGETEKLFNELKVK 1136
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 75/383 (19%), Positives = 151/383 (39%), Gaps = 31/383 (8%)
Query: 23 EALYDRLFKKGSSDVSVRQQLNQFLKSKK-----RVFK-----------WEVGDTLKKLR 66
E +++RL + S+V+ L + K KK R+FK + + R
Sbjct: 753 ERIFERLAPEHRSEVAYNALLLSYTKKKKRGRAERLFKELKATGTISSCYSLNLLASMYR 812
Query: 67 DRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL--PETSKNHL 124
L L L++ +K G+ + + L +VQG++ E + + P
Sbjct: 813 QLGLDAEVLMLAKEAQKLGVELDMCFYNLLLPAKFRVQGLEEVEKLYATITSPRDRTRFF 872
Query: 125 TYGSLLNCYCKELMTEKAEALLE----KMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
T ++ N Y +K +LE M+ + +N L+++YA ++
Sbjct: 873 TCLAMANIYVSAGRNDKVLEMLELIDQGMEAGTIVKQRRRYNVLISMYASLEDGARVERT 932
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
+ +K P++ Y +RA + + AE + + + + + T F+ + +Y
Sbjct: 933 WERLKQQR-QPNTEDYCCIIRAWGKLGHVVRAETIFQVAEANEKSLKYSTVFNAMMFVYS 991
Query: 241 EAGLFEKAERALKELENR-NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
AG+ E+AE ++ +E D Y L+ LY + G++ ++ R+ +
Sbjct: 992 VAGMREEAEGLVQRMEYELGVKLDPWCYHHLVLLYAKAGDIGKMLSTLRAAQAGGKKERR 1051
Query: 300 ISYL-----NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAE 354
+ L + L + D+ AE+ W+ + N ++ A+ R E
Sbjct: 1052 FTPLAATLWAALNTLADAGDVDTAEETLTRWKRSGYRVTTGLYNRLLRAHLVAAR--PTE 1109
Query: 355 ELKERARRRGADPNAKTWEIFSD 377
ER G PN +T ++F++
Sbjct: 1110 RFVERMLVDGVVPNGETEKLFNE 1132
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 159/377 (42%), Gaps = 15/377 (3%)
Query: 85 GMNKTVSDQAIHLDLVAKVQGIDAAENYFV--DLPETSKNHLTYGSLLNCYCKELMTEKA 142
G+ V+ I + V ++ I+ A + + +L + + ++Y +++N YC+ +K
Sbjct: 664 GVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKV 723
Query: 143 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 202
L+EKMK+ L +S + S++ L + + EM I+PD+ Y +
Sbjct: 724 WKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDG 783
Query: 203 LAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 261
DI A + EM RD + D T++ + S + + G +A + E+ R
Sbjct: 784 FCKRGDIRAASKFFYEMHSRD--ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLE 841
Query: 262 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 321
D+ + L+ Y + G++ + +R+ + A + ++Y +I L DL A +
Sbjct: 842 PDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 901
Query: 322 FKE-WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 380
E W+ G +I N ++ K G +E A +L G + + T+ D Y
Sbjct: 902 LHEMWKIGLQP-NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 960
Query: 381 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE-ILKKA 439
++G+M A + L + + G P+ T M F ++ E L +L K
Sbjct: 961 KSGEMDKAQEILTEMLGKGLQ------PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 1014
Query: 440 VDDLGVEVFEPLIRTYA 456
+ F L++ Y
Sbjct: 1015 IAP-NATTFNCLVKQYC 1030
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 129/279 (46%), Gaps = 1/279 (0%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
S N +TY +L++ CKE + A LL +M ++ L + +NS++ K+G+ E+
Sbjct: 875 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 934
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
++ E +A+ + D+ TY M A ++ A+ ++ EM G + TF+ L +
Sbjct: 935 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKG-LQPTIVTFNVLMNG 993
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
+ G+ E E+ L + + + + + L+ Y NL I++ +
Sbjct: 994 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPD 1053
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+Y N+++ N +++ A F+E + + + +V+I + K + A E+ +
Sbjct: 1054 GKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFD 1113
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
+ RR G + + ++ FSD + VD +++ I+
Sbjct: 1114 QMRRDGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 1152
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/336 (19%), Positives = 131/336 (38%), Gaps = 11/336 (3%)
Query: 76 KLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVD------LPETSKNHLTYGSL 129
KL E M+++G+ + L+ ++ + AE F + LP+T + Y +L
Sbjct: 725 KLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDT----IVYTTL 780
Query: 130 LNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
++ +CK A +M ++ + + ++++ + + G + + EM +
Sbjct: 781 VDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGL 840
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
PD T+ M I A RV M + G + + T++ L + G + A
Sbjct: 841 EPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAG-CSPNVVTYTTLIDGLCKEGDLDSAN 899
Query: 250 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 309
L E+ ++ Y ++ ++GN+ E ++ A N ++Y ++
Sbjct: 900 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 959
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
++ A++ E I NV++ + G LE+ E+L +G PNA
Sbjct: 960 CKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 1019
Query: 370 KTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGK 405
T+ Y ++K A + G GK
Sbjct: 1020 TTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGK 1055
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/297 (19%), Positives = 115/297 (38%), Gaps = 14/297 (4%)
Query: 116 LPETSK---NHLTYGSLL-----NCYCKELM-----TEKAEALLEKMKELNLGFSSMPFN 162
LPE K L YG +L N Y L T A + + E+ + ++ +N
Sbjct: 614 LPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREFPEVGVCWNVASYN 673
Query: 163 SLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRD 222
++ + G + ++ M+ PD +Y+ + ++ ++IE+MK+
Sbjct: 674 IVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQK 733
Query: 223 GRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 282
G + + T+ ++ + +AE A E+ + D Y L+ + + G++
Sbjct: 734 G-LKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRA 792
Query: 283 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 342
+ + + ++Y +I + D+ A K F E DI ++
Sbjct: 793 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMN 852
Query: 343 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
Y K G +++A + + G PN T+ D + GD+ A + L + G
Sbjct: 853 GYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 909
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 148/331 (44%), Gaps = 8/331 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
AL + K G++ V L + + A ++F + ET+ N +T+ +L+N
Sbjct: 133 ALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMN 192
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM-KASSIM 190
C+E +A ALL++M E L + + + +++ K G ++++M + S I+
Sbjct: 193 GLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHII 252
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
P+ Y+ + +L S A+ + EM+ G + D T++++ + +G + AE+
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKG-IFPDLFTYNSMIVGFCSSGRWSDAEQ 311
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQV 308
L+E+ R D+ Y LI + + G E ++ + R PNT I+Y +MI
Sbjct: 312 LLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNT--ITYNSMIDG 369
Query: 309 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 368
L AE F + + D+ +I Y R+++ EL RRG N
Sbjct: 370 FCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVAN 429
Query: 369 AKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
T+ + GD+ A+D ++ I +G
Sbjct: 430 TVTYNTLIHGFCLVGDLNAALDLSQQMISSG 460
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 156/378 (41%), Gaps = 23/378 (6%)
Query: 77 LSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE-TSKNHLTYGSLLNCYCK 135
L E +E++ V+ A+ V + + +AAE Y LP N +TY S+++ +CK
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK 372
Query: 136 ELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYT 195
+ + AE + M F +L+ Y + ++ EM ++ ++ T
Sbjct: 373 QDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVT 432
Query: 196 YNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 255
YN + V D++ A + ++M G V D T + L + G + A K +
Sbjct: 433 YNTLIHGFCLVGDLNAALDLSQQMISSG-VCPDIVTCNTLLDGLCDNGKLKDALEMFKAM 491
Query: 256 ENRNAHRDLS-----------AYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISY 302
+ D S Y LI G E ++ + R P+T I+Y
Sbjct: 492 QKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDT--ITY 549
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+MI L L A + F S + ++ N +I Y K GR+++ EL R
Sbjct: 550 SSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGR 609
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ 422
RG +A + + + G++ A+D ++ I +G P + TIR + F
Sbjct: 610 RGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSG------VYPDTITIRNMLTGFWS 663
Query: 423 EKDVDGAEGFLEILKKAV 440
+++++ A LE L+ +V
Sbjct: 664 KEELERAVAMLEDLQMSV 681
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 82/405 (20%), Positives = 158/405 (39%), Gaps = 27/405 (6%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK---NHLTYGSLL 130
A+ L + M + G+ T +D + K +A N + E S N + Y +++
Sbjct: 203 AVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAII 262
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
+ CK+ A+ L +M+E + +NS++ + +G ++QEM I
Sbjct: 263 DSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKIS 322
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
PD TYN + A A + +EM G + + T++++ + + + AE
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAAELYDEMLPRG-IIPNTITYNSMIDGFCKQDRLDAAED 381
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQV 308
+ + D+ + LI Y + + + + R NT ++Y +I
Sbjct: 382 MFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANT--VTYNTLIHG 439
Query: 309 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR------ 362
+ DL A ++ S DI N ++ G+L++A E+ + ++
Sbjct: 440 FCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLD 499
Query: 363 -----RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 417
G +P+ T+ I + G A + E+ G VP + T + +
Sbjct: 500 ASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRG------IVPDTITYSSMI 553
Query: 418 RHFEQEKDVDGA-EGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 461
++ +D A + F+ + K+ V F LI Y AGR
Sbjct: 554 DGLCKQSRLDEATQMFVSMGSKSFSP-NVVTFNTLINGYCKAGRV 597
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 150/343 (43%), Gaps = 13/343 (3%)
Query: 100 VAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFS 157
+ K +D A F + E S + +T+ +L++ CK ++A+ +LE M++ N +
Sbjct: 192 LCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPN 251
Query: 158 SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIE 217
+ ++SL+ KTG + + M I P+ TYN + N + A ++E
Sbjct: 252 VITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLME 311
Query: 218 EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQT 277
EM G D T++ L + G +A R +++ + + D+ Y LI + +
Sbjct: 312 EMTATG-CLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKL 370
Query: 278 GNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 335
+ ++ + + P+ +++ +++ N + AE+ +E + + D+
Sbjct: 371 ERIDMARTLFDDMLKQAVLPDV--VTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVY 428
Query: 336 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 395
++ + K GR+ A + +R +RG PN T+ D + R G +A LE+
Sbjct: 429 TYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEM 488
Query: 396 IDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 438
+ G P+ T R+ + F D++ A LE L++
Sbjct: 489 VGNG------VQPNVITYRSLIGGFCGTGDLEEARKMLERLER 525
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 174/404 (43%), Gaps = 34/404 (8%)
Query: 88 KTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEAL 145
K V I +D + K + A YF + + T N TY L+N +CK +A L
Sbjct: 5 KNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLL 64
Query: 146 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 205
L++MKE L + + +++++ + + + + ++M + MP+ TYN + L
Sbjct: 65 LKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCR 124
Query: 206 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 265
+ A +++EM+ G + D ++ L + + G + A + ++ N + D+
Sbjct: 125 NGLMDEAYELLDEMRERG-LQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVV 183
Query: 266 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 325
AY LI +TG L E +++ +R +++ ++ L L A++ +
Sbjct: 184 AYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETM 243
Query: 326 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW-EIFSDYYLRNG- 383
E T ++ + +I K G++ +A+E+ +R RG +PN T+ + + + NG
Sbjct: 244 EDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGV 303
Query: 384 DMKL-------AVDCLEKAID----------TGR--------GD-GGKWV-PSSETIRTF 416
D L A CL I TGR GD K+ P T
Sbjct: 304 DSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCL 363
Query: 417 MRHFEQEKDVDGAEG-FLEILKKAVDDLGVEVFEPLIRTYAAAG 459
+ F + + +D A F ++LK+AV V F L+ Y AG
Sbjct: 364 IGGFCKLERIDMARTLFDDMLKQAVLP-DVVTFSTLVEGYCNAG 406
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 98/432 (22%), Positives = 166/432 (38%), Gaps = 58/432 (13%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A KL E M + V +D + K + A+ + + + N +TY SL++
Sbjct: 201 ACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLID 260
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK A+ + ++M + + + +NSL+ + T + +++EM A+ +P
Sbjct: 261 GLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLP 320
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKR------------------------------ 221
D TYN + L A R+ +MK
Sbjct: 321 DIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLF 380
Query: 222 ----DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQT 277
V D TFS L Y AGL + AER L+E+ + D+ Y L+ + +
Sbjct: 381 DDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKV 440
Query: 278 GNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 335
G + E R+ + + R PN ++Y +I A K +E ++
Sbjct: 441 GRMVEARRVLKRMAKRGCQPNV--VTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVI 498
Query: 336 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAK----TWEIFSDYYLRNGDMKLAVDC 391
+IG + G LE A ++ ER R D N K + + D R G M A++
Sbjct: 499 TYRSLIGGFCGTGDLEEARKMLERLER---DENCKADMFAYRVMMDGLCRTGRMSAALEL 555
Query: 392 LEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE---ILKKAVDDLGVEVF 448
LE +G P + +R Q K++ A LE + +K+ + E +
Sbjct: 556 LEAIKQSG------TPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPN--AEAY 607
Query: 449 EPLIRTYAAAGR 460
E +I+ A GR
Sbjct: 608 EAVIQELAREGR 619
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/343 (20%), Positives = 133/343 (38%), Gaps = 7/343 (2%)
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
E KN +T+ +++ CK +A KMK+ + +N L+ + K +
Sbjct: 2 ECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRA 61
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
+++EMK S + P+ TY+ + + A ++ +M +G + T++ L S
Sbjct: 62 YLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENG-CMPNLVTYNTLLS 120
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
GL ++A L E+ R D +Y L+ +TG + +++
Sbjct: 121 GLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPP 180
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
++Y +I L L A K F++ D+ ++ K RL+ A+++
Sbjct: 181 DVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVL 240
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 417
E R PN T+ D + G ++ A + ++ I G P+ T + +
Sbjct: 241 ETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRG------IEPNVVTYNSLI 294
Query: 418 RHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 460
F VD A +E + + + LI GR
Sbjct: 295 HGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGR 337
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 145/319 (45%), Gaps = 12/319 (3%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TYGS ++ CKE E+A +LEKMKE+ L +++ +N+L+ Y G+ E +M
Sbjct: 263 TYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKM 322
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+MP TYN+ + AL + A+ +I+EM G V D T++ L + Y G
Sbjct: 323 VREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLV-PDSVTYNILINGYCRCGN 381
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISY 302
+KA E+ ++ Y LI + + G + + ++ + + FP+ I +
Sbjct: 382 VKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDL--IMF 439
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+I ++ A KE + D N ++ +EG++E A EL E +
Sbjct: 440 NALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKS 499
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ 422
RG P+ ++ Y + GDMK A ++ + G + P+ T ++ +
Sbjct: 500 RGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIG------FNPTLLTYNALIQGLCK 553
Query: 423 EKDVDGAEGFL-EILKKAV 440
++ D AE L E++ K +
Sbjct: 554 NEEGDHAEQLLKEMISKGI 572
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 132/315 (41%), Gaps = 9/315 (2%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+T+ ++N CKE +KA+ + M+ L + + + +N+++ Y G E I
Sbjct: 192 VTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDL 251
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
MK + PDSYTY ++ + + A ++E+MK G + T++ L Y G
Sbjct: 252 MKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIG-LRPTAVTYNTLIDGYCNKG 310
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
E A ++ +S Y LI + E I + + +++Y
Sbjct: 311 NLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYN 370
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVT-NVMIGAYAKEGRLENAEELKERARR 362
+I ++ A E S RVT +I +K GR++ A++L E+ R
Sbjct: 371 ILINGYCRCGNVKKAFTLHDEMISK-GIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVR 429
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ 422
+G P+ + D + NG+M A L++ D K VP T T M+ +
Sbjct: 430 KGIFPDLIMFNALIDGHCANGNMDRAFAMLKEM------DQMKVVPDEVTFNTLMQGRCR 483
Query: 423 EKDVDGAEGFLEILK 437
E V+ A +E +K
Sbjct: 484 EGKVEAARELIEEMK 498
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 111/272 (40%), Gaps = 3/272 (1%)
Query: 129 LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS 188
+L+ + K TEKA L +M + + S + FN ++ + K G +K I M+A
Sbjct: 162 MLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALG 221
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
I P+ TYN + + + GA + + MK G V D T+ + S + G E+A
Sbjct: 222 IKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRG-VKPDSYTYGSFISGMCKEGKLEEA 280
Query: 249 ERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM-IQ 307
L++++ Y LI Y GNL + +R + +S NM I
Sbjct: 281 SGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFD-YRDKMVREGLMPTVSTYNMLIH 339
Query: 308 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
L + A+ KE D N++I Y + G ++ A L + +G P
Sbjct: 340 ALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQP 399
Query: 368 NAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
T+ + G MK A D EK + G
Sbjct: 400 TRVTYTSLIYVLSKRGRMKQADDLFEKIVRKG 431
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 1/148 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY SL+ K ++A+ L EK+ + + FN+L+ + G+ ++ A+++E
Sbjct: 402 VTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKE 461
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M ++PD T+N M+ + A +IEEMK G + D +++ L S Y + G
Sbjct: 462 MDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRG-IKPDHISYNTLISGYSKRG 520
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLI 271
+ A R E+ + + L Y LI
Sbjct: 521 DMKDAFRVRDEMLSIGFNPTLLTYNALI 548
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 57/117 (48%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ +T+ +L+ C+E E A L+E+MK + + +N+L++ Y+K G + +
Sbjct: 470 DEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVR 529
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
EM + P TYN ++ L + AE++++EM G D T S + I
Sbjct: 530 DEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGI 586
>gi|357502623|ref|XP_003621600.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496615|gb|AES77818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 890
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 126/276 (45%), Gaps = 5/276 (1%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
LTY SLL+ + M E A+ LL +M + +N+ + K G + + +E
Sbjct: 320 LTYNSLLSVCASKGMWEMAQKLLSEMDHRCIVPDVFTYNTYLDTLCKAGQIDLARRVFEE 379
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + + P+ TY+ M A N + A + EEMK V D +++ L IY + G
Sbjct: 380 MSSKRVWPNVVTYSAMMDGYAKANLLEDALNLYEEMKLRS-VCLDRVSYNTLVGIYEKLG 438
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANIS 301
++A KE+E +RD+ Y L++ YG+ G EV R++ + R +PNT ++
Sbjct: 439 NLDEAIEKCKEMERSGINRDVVTYNALLSGYGKHGMYDEVRRLFEEMKARNIYPNT--LT 496
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y MI + + A ++E++ D+ + +I K G +E++ L
Sbjct: 497 YSTMIDMYTKGEMFQEAMDVYREFKMARLEIDVVFYSAIIDTLCKNGLMESSIMLLMAMM 556
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
+G PN T+ D ++ ++ V+ AID
Sbjct: 557 EKGIKPNVVTFNSIIDASQQSPTLEYGVNGSSDAID 592
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 5/210 (2%)
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGR-VAADWTTFSNLASIYVE 241
EM A+ +MPD TYN + A+ A++++ EM D R + D T++ +
Sbjct: 309 EMIANGLMPDRLTYNSLLSVCASKGMWEMAQKLLSEM--DHRCIVPDVFTYNTYLDTLCK 366
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
AG + A R +E+ ++ ++ Y ++ Y + L + ++ ++L +S
Sbjct: 367 AGQIDLARRVFEEMSSKRVWPNVVTYSAMMDGYAKANLLEDALNLYEEMKLRSVCLDRVS 426
Query: 302 YLNMIQVLVNLKDLPGA-EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
Y ++ + L +L A EKC KE E D+ N ++ Y K G + L E
Sbjct: 427 YNTLVGIYEKLGNLDEAIEKC-KEMERSGINRDVVTYNALLSGYGKHGMYDEVRRLFEEM 485
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
+ R PN T+ D Y + + A+D
Sbjct: 486 KARNIYPNTLTYSTMIDMYTKGEMFQEAMD 515
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 132/307 (42%), Gaps = 3/307 (0%)
Query: 79 ENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKE 136
+ M+ RG+ +TV + + + +D AE + E + + TYG+L+ C+
Sbjct: 140 DEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRV 199
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 196
E A + EKM + +++ F L+ + K G E + + +EM+ + PD+ TY
Sbjct: 200 GRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTY 259
Query: 197 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 256
N + L D+ A ++ EM+ G + D T++ L Y + + A + +
Sbjct: 260 NAIVNGLCRARDLKSASGIVVEMRSAG-LRPDTVTYTTLIDGYCKEEELDMAMEIKQNMV 318
Query: 257 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 316
D Y LI+ + G ++ R+ + A N +Y +I D+
Sbjct: 319 AEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVK 378
Query: 317 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 376
+ KE ++ + NV++ + K G+++NA+ L G P+ T+ I
Sbjct: 379 TGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILL 438
Query: 377 DYYLRNG 383
D + ++G
Sbjct: 439 DGHCKHG 445
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 100/278 (35%), Gaps = 36/278 (12%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
FN LM + G + EM++ + ++N + + D+ GAE + M
Sbjct: 119 FNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMS 178
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
G V D T+ L G E A +++ R + + LI + + G+
Sbjct: 179 EAG-VTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDA 237
Query: 281 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 340
+ + R +R ++Y ++ L +DL A E S D +
Sbjct: 238 ETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTL 297
Query: 341 IGAYAKEGRLENAEELKE----------------------RARRR-------------GA 365
I Y KE L+ A E+K+ +A R G
Sbjct: 298 IDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGL 357
Query: 366 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDG 403
+P+ T+ + D + R GD+K + L++ + GR G
Sbjct: 358 EPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPG 395
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 122/292 (41%), Gaps = 49/292 (16%)
Query: 174 PEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFS 233
PE +Q + A + P++ +NV MR L + +++ A+ V +EM+ G V +F+
Sbjct: 98 PEACAFYLQLLDAG-LPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRG-VRRTVVSFN 155
Query: 234 NLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 293
+ S AG + AE HR +S + G +VY
Sbjct: 156 TMISGMCRAGDLDGAE---------TLHRRMS----------EAGVTPDVY--------- 187
Query: 294 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
+Y +IQ L + + A F++ + V ++I A+ K+G E
Sbjct: 188 -------TYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETM 240
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETI 413
EL R RG P+A T+ + R D+K A + + G P + T
Sbjct: 241 LELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAG------LRPDTVTY 294
Query: 414 RTFMRHFEQEKDVDGAEGFLEILKKAV-DDLGVE--VFEPLIRTYAAAGRTS 462
T + + +E+++D A +EI + V + +G++ + LI + AGR++
Sbjct: 295 TTLIDGYCKEEELDMA---MEIKQNMVAEGVGLDEVTYTALISGLSKAGRSA 343
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/369 (21%), Positives = 162/369 (43%), Gaps = 13/369 (3%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
ALK+ E+ V + + + K +D A F + E S + +T+ +L++
Sbjct: 285 ALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMD 344
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK ++A+ +LE M++ N + + ++SL+ KTG + + M I P
Sbjct: 345 GLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEP 404
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ TYN + N + A ++EEM G D T++ L + G +A R
Sbjct: 405 NVVTYNSLIHGFCMTNGVDSALLLMEEMTATG-CLPDIITYNTLIDGLCKTGRAPEANRL 463
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVL 309
+++ + + D+ Y LI + + + ++ + + P+ +++ +++
Sbjct: 464 FGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDV--VTFSTLVEGY 521
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
N + AE+ +E + + D+ ++ + K GR+ A + +R +RG PN
Sbjct: 522 CNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNV 581
Query: 370 KTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 429
T+ D + R G +A LE+ + G+G + P+ T R+ + F D++ A
Sbjct: 582 VTYTALIDAFCRAGKPTVAYRLLEEMV----GNGVQ--PNVITYRSLIGGFCGTGDLEEA 635
Query: 430 EGFLEILKK 438
LE L++
Sbjct: 636 RKILERLER 644
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 173/404 (42%), Gaps = 34/404 (8%)
Query: 88 KTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEAL 145
K V I +D + K + A YF + + T N TY L+N +CK +A L
Sbjct: 124 KNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLL 183
Query: 146 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 205
L++MKE L + + +++++ + + + + ++M + MP+ TYN + L
Sbjct: 184 LKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCR 243
Query: 206 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 265
+ A +++EM+ G + D ++ L + + G + A + ++ N + D+
Sbjct: 244 NGLMDEAYELLDEMRERG-LQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVV 302
Query: 266 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 325
AY LI + G L E +++ +R +++ ++ L L A++ +
Sbjct: 303 AYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETM 362
Query: 326 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW-EIFSDYYLRNG- 383
E T ++ + +I K G++ +A+E+ +R RG +PN T+ + + + NG
Sbjct: 363 EDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGV 422
Query: 384 DMKL-------AVDCLEKAID----------TGR--------GD-GGKWV-PSSETIRTF 416
D L A CL I TGR GD K+ P T
Sbjct: 423 DSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCL 482
Query: 417 MRHFEQEKDVDGAEG-FLEILKKAVDDLGVEVFEPLIRTYAAAG 459
+ F + + +D A F ++LK+AV V F L+ Y AG
Sbjct: 483 IGGFCKLERIDMARTLFDDMLKQAVLP-DVVTFSTLVEGYCNAG 525
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 83/390 (21%), Positives = 154/390 (39%), Gaps = 14/390 (3%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIH---LDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLL 130
A +L E M + G V D AI+ + + K + A +YF + E KN +T+ ++
Sbjct: 78 ACELLEEMRESG---PVPDAAIYNFVIHALCKARNTAKALDYFRSM-ECEKNVITWTIMI 133
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
+ CK +A KMK+ + +N L+ + K + +++EMK S +
Sbjct: 134 DGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLA 193
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
P+ TY+ + + A ++ +M +G + T++ L S GL ++A
Sbjct: 194 PNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENG-CMPNLVTYNTLLSGLCRNGLMDEAYE 252
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
L E+ R D +Y L+ +TG + +++ ++Y +I L
Sbjct: 253 LLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLC 312
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
L A K F++ D+ ++ K RL+ A+++ E R PN
Sbjct: 313 KAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVI 372
Query: 371 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 430
T+ D + G ++ A + ++ I G P+ T + + F VD A
Sbjct: 373 TYSSLIDGLCKTGQVRDAQEVFKRMIVRG------IEPNVVTYNSLIHGFCMTNGVDSAL 426
Query: 431 GFLEILKKAVDDLGVEVFEPLIRTYAAAGR 460
+E + + + LI GR
Sbjct: 427 LLMEEMTATGCLPDIITYNTLIDGLCKTGR 456
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 113/296 (38%), Gaps = 37/296 (12%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL L E M G + +D + K A F D+ + + +TY L+
Sbjct: 425 ALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIG 484
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+CK + A L + M + + + F++L+ Y G + +++EM AS P
Sbjct: 485 GFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSP 544
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D YTY + V + A RV++ M + G + T++ L + AG A R
Sbjct: 545 DVYTYTSLVDGFCKVGRMVEARRVLKRMAKRG-CQPNVVTYTALIDAFCRAGKPTVAYRL 603
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
L+E+ ++ Y+ LI + TG+L E +I L
Sbjct: 604 LEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERL--------------------- 642
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
E + C D+ VM+ + GR+ A EL E ++ G P
Sbjct: 643 ------------ERDENCKA-DMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPP 685
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/371 (20%), Positives = 142/371 (38%), Gaps = 46/371 (12%)
Query: 117 PETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK 176
P + N TY ++ CK +KA LLE+M+E + +N ++ K + K
Sbjct: 53 PGITPNVFTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAK 112
Query: 177 -----------------------------IP---AIIQEMKASSIMPDSYTYNVWMRALA 204
+P +MK +P+ +TYNV +
Sbjct: 113 ALDYFRSMECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFC 172
Query: 205 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 264
V+ + A +++EMK G +A + T+S + + + A + +++ +L
Sbjct: 173 KVHKVHRAYLLLKEMKESG-LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNL 231
Query: 265 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 324
Y L++ + G + E Y + +R SY ++ L + A K F++
Sbjct: 232 VTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFED 291
Query: 325 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 384
+G D+ + +I K GRL+ A +L E+ R +P+ T+ D +
Sbjct: 292 NSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDR 351
Query: 385 MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLG 444
++ A LE D P+ T + + + V A+ E+ K+ +
Sbjct: 352 LQEAQQVLETMEDR------NCTPNVITYSSLIDGLCKTGQVRDAQ---EVFKRMI---- 398
Query: 445 VEVFEPLIRTY 455
V EP + TY
Sbjct: 399 VRGIEPNVVTY 409
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 104/245 (42%), Gaps = 16/245 (6%)
Query: 81 MEKRGMNKTVSD----QAIHLDLVA---KVQG------IDAAENYFVDL--PETSKNHLT 125
+E+ M +T+ D QA+ D+V V+G +D AE ++ + S + T
Sbjct: 489 LERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYT 548
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y SL++ +CK +A +L++M + + + + +L+ + + G P +++EM
Sbjct: 549 YTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMV 608
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
+ + P+ TY + D+ A +++E ++RD AD + + G
Sbjct: 609 GNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRM 668
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI-SYLN 304
A L+ ++ Y LI Q L + + + L+ + N +Y
Sbjct: 669 SAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEA 728
Query: 305 MIQVL 309
+IQ L
Sbjct: 729 VIQEL 733
>gi|302768008|ref|XP_002967424.1| hypothetical protein SELMODRAFT_231012 [Selaginella moellendorffii]
gi|300165415|gb|EFJ32023.1| hypothetical protein SELMODRAFT_231012 [Selaginella moellendorffii]
Length = 546
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 114/515 (22%), Positives = 210/515 (40%), Gaps = 71/515 (13%)
Query: 24 ALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTL------KKLRDRKLYYP---- 73
AL+D + +KG S+ N LK+ R +WE+ + L K L K +
Sbjct: 10 ALHDWMIEKGGYAPSIFA-YNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFTFSTLIS 68
Query: 74 ----------ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SK 121
A+ + ME G+ + + ++L KV+ A + F L + +
Sbjct: 69 GYGRANRLEDAMGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKASGIAP 128
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ + Y S++N Y K ++A+ LL +MKE L ++ + L+ YA++ + +
Sbjct: 129 DKVIYNSMINLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLEAKQVF 188
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EMK I D T N+ + + + AE + M + + + T++ + +Y E
Sbjct: 189 LEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEELFWSMSKTLGIQQNVVTYNTMIKVYKE 248
Query: 242 AGLF------------------------------------EKAERALKELENRNAHRDLS 265
A L EKA R +++++ R +
Sbjct: 249 AELLSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHEKAMRLVRKMQQRGIEPNAV 308
Query: 266 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 325
Y LI++YG+TG ++++LR I Y +MI V + A++ +E
Sbjct: 309 TYSTLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQSMIVVYERAGLVAHAKRLLEEL 368
Query: 326 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 385
+ DI + I AK +LE A +L R+ G + T++ ++RN
Sbjct: 369 KQP----DIVPRDTAISILAKAEKLEEAAKLYWRSHEAGEIKESVTYKSMIQLFMRNKRS 424
Query: 386 KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGV 445
K A+D E ++G ++P SET + + Q + ++ AE +++ L
Sbjct: 425 KNAIDVFENMRESG------FLPDSETTVVLLAAYGQLRQLEDAEKLYLDMRERGCTLEK 478
Query: 446 EVFEPLIRTYAAAG--RTSPVMLRRLKMEKVEVSE 478
EV +++ Y A R + M LK+E ++ E
Sbjct: 479 EVHFQMLKLYGDARKIREAEDMFAALKLEGLDGDE 513
>gi|297826989|ref|XP_002881377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327216|gb|EFH57636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 589
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 124/326 (38%), Gaps = 60/326 (18%)
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
+ N TY +L+N + +E + EKAE + E+++E + ++ G+P
Sbjct: 304 QCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDG------------HIDSRAGYPYGA 351
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
I M+ PD +YN+ + A S AE V EEMKR G +A + L S
Sbjct: 352 AEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLG-IAPTMKSHMLLLS 410
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
Y A K E +KE+ D ++ LYG+ G +++
Sbjct: 411 AYSRARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKM-------------- 456
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
EK E E+G T DI N++I Y K G LE EEL
Sbjct: 457 ---------------------EKILAEMENGPCTADISTYNILINIYGKAGFLERIEELF 495
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL---EKAIDTGRGDGGKWVPSSETIR 414
+ R P+ TW Y R KL V CL E+ ID+G P T +
Sbjct: 496 VELKERNFKPDVVTWTSRIGAYSRK---KLYVKCLEIFEEMIDSG------CAPDGGTAK 546
Query: 415 TFMRHFEQEKDVDGAEGFLEILKKAV 440
+ E V+ L + K V
Sbjct: 547 VLLSACSSEDQVEQVTSVLRTMHKGV 572
>gi|168047776|ref|XP_001776345.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672305|gb|EDQ58844.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 503
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 136/306 (44%), Gaps = 14/306 (4%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
+G+ + +C ++A + +M++LN+ F+ + +N L+ Y + G E+ ++ EM
Sbjct: 176 VFGTFIKAFCDAGRLKEALLITTEMEKLNVPFNVVIYNILIDAYGRVGQLEEAEGLMTEM 235
Query: 185 KASSIMPDSYTYNVWMRALAAVN---DISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+ I P+ TYN + AE +IEEM+ G + D TF+ L Y
Sbjct: 236 RERGIQPNVGTYNALITGYLEAKPKRQFVVAEGLIEEMEASG-LYPDVVTFTMLLGAYGH 294
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
GL E+AE+ ++ R + +Y LI Y + + R + +R N +
Sbjct: 295 EGLTEQAEQVFNRMKARGVQPNSYSYTALINAYAERRCPEKAARAFEMIRKQGVNPTVET 354
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWE-SGCATYDIRVTNVMI-GAYAKEGRLENAEELKER 359
Y ++ DL + +K + GC RVT + I A+ K+GR + A +L E
Sbjct: 355 YTALLDAYRRAGDLEMVQAVWKSMKVEGCVA--TRVTYMTILDAFQKQGRYKEARDLIEE 412
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
+ +G P+ + + + Y+R G A D L + G ++P S T T +
Sbjct: 413 FKNQGHKPDLMVYNMLLNSYMRGGRHVKASDILLEMKTAG------FLPDSFTYCTLIYG 466
Query: 420 FEQEKD 425
F + +D
Sbjct: 467 FLRVRD 472
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 132/282 (46%), Gaps = 4/282 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI---P 178
N + Y L++ Y + E+AE L+ +M+E + + +N+L+T Y + +
Sbjct: 208 NVVIYNILIDAYGRVGQLEEAEGLMTEMRERGIQPNVGTYNALITGYLEAKPKRQFVVAE 267
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+I+EM+AS + PD T+ + + A AE+V MK G V + +++ L +
Sbjct: 268 GLIEEMEASGLYPDVVTFTMLLGAYGHEGLTEQAEQVFNRMKARG-VQPNSYSYTALINA 326
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
Y E EKA RA + + + + + Y L+ Y + G+L V +W+S+++
Sbjct: 327 YAERRCPEKAARAFEMIRKQGVNPTVETYTALLDAYRRAGDLEMVQAVWKSMKVEGCVAT 386
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
++Y+ ++ A +E+++ D+ V N+++ +Y + GR A ++
Sbjct: 387 RVTYMTILDAFQKQGRYKEARDLIEEFKNQGHKPDLMVYNMLLNSYMRGGRHVKASDILL 446
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 400
+ G P++ T+ +LR D A+ + ++ G+
Sbjct: 447 EMKTAGFLPDSFTYCTLIYGFLRVRDQTKALKYHREMMNRGQ 488
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 87/197 (44%), Gaps = 9/197 (4%)
Query: 189 IMPDSYTYNVWMR-ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
+ PDS T++V M A+ + + ++M + G ++ + F + +AG ++
Sbjct: 134 VFPDSVTFSVLMNSAVKGGGSLKEVWALYQDMVQRG-ISPSVSVFGTFIKAFCDAGRLKE 192
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNM 305
A E+E N ++ Y LI YG+ G L E + + R PN +Y +
Sbjct: 193 ALLITTEMEKLNVPFNVVIYNILIDAYGRVGQLEEAEGLMTEMRERGIQPNVG--TYNAL 250
Query: 306 IQVLVNLK---DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
I + K AE +E E+ D+ +++GAY EG E AE++ R +
Sbjct: 251 ITGYLEAKPKRQFVVAEGLIEEMEASGLYPDVVTFTMLLGAYGHEGLTEQAEQVFNRMKA 310
Query: 363 RGADPNAKTWEIFSDYY 379
RG PN+ ++ + Y
Sbjct: 311 RGVQPNSYSYTALINAY 327
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 3/167 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
A + E + K+G+N TV LD + ++ + + + + +TY ++L+
Sbjct: 336 AARAFEMIRKQGVNPTVETYTALLDAYRRAGDLEMVQAVWKSMKVEGCVATRVTYMTILD 395
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ K+ ++A L+E+ K M +N L+ Y + G K I+ EMK + +P
Sbjct: 396 AFQKQGRYKEARDLIEEFKNQGHKPDLMVYNMLLNSYMRGGRHVKASDILLEMKTAGFLP 455
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
DS+TY + V D + A + EM G++ D T++ L +I
Sbjct: 456 DSFTYCTLIYGFLRVRDQTKALKYHREMMNRGQL-PDPKTYAKLRAI 501
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 149/370 (40%), Gaps = 10/370 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ T+ SL+N C+ + A +L+ M + +NSL+ K G E+ I+
Sbjct: 315 DRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEIL 374
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+M P++ TYN + L N + A + + G + D TF++L
Sbjct: 375 NQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKG-ILPDVCTFNSLIQGLCL 433
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
A +E++ + H D Y LI G L E + + + + + ++
Sbjct: 434 TNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVT 493
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I K + AE+ F E E + ++ N +I K R+E A +L ++
Sbjct: 494 YNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQML 553
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
G P+ T+ Y+ R GD+K A D ++ G P S T T +
Sbjct: 554 MEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNG------CEPDSVTYGTLILGLS 607
Query: 422 QEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTS-PVMLRRLKMEKVEVSEAS 480
+ V+ A L ++ L + + P+I+ RTS V L R MEK + +A
Sbjct: 608 KAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAV 667
Query: 481 --KKLLEAIC 488
K + +C
Sbjct: 668 TYKVVFRGLC 677
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 3/200 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
AL L + ME G ++ V +D K + I+ AE F ++L S+N +TY +L++
Sbjct: 475 ALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLID 534
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK E+A L+++M L +NSL+T + + G +K I+Q M ++ P
Sbjct: 535 GLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEP 594
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
DS TY + L+ + A R++ ++ G V A T + +++ E E A R
Sbjct: 595 DSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSE-AVRL 653
Query: 252 LKELENRNAHRDLSAYQFLI 271
+E+ + D Y+ +
Sbjct: 654 FREMMEKGDPPDAVTYKVVF 673
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 112/258 (43%), Gaps = 3/258 (1%)
Query: 116 LPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
L + S N +TY +L++ CKE E+A L + + FNSL+ T +
Sbjct: 379 LRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHR 438
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
+ +EMK PD +TYN+ + +L + + A +++EM+ G + + T++ L
Sbjct: 439 LAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSG-CSRNVVTYNTL 497
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
+ + E+AE E+E + R++ Y LI + + E ++ + +
Sbjct: 498 IDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGL 557
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAE 354
+Y +++ D+ A + S GC + +++G +K GR+E A
Sbjct: 558 KPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILG-LSKAGRVELAS 616
Query: 355 ELKERARRRGADPNAKTW 372
L + +G +T+
Sbjct: 617 RLLRTVQLKGMVLAPQTY 634
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 102/249 (40%), Gaps = 2/249 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKE-LNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
T+ L+ Y K + ++A A+++ M+E L + +N L+ + + + +
Sbjct: 142 TFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSR 201
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + I PD T+N+ ++AL + I A ++EEM G ++ D TF+ L ++E G
Sbjct: 202 MVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYG-LSPDEKTFTTLMQGFIEEG 260
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
A R +++ L+ Y + G + EV + ++
Sbjct: 261 NMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFN 320
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+++ L + + A + DI N +I K G +E A E+ + R
Sbjct: 321 SLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILR 380
Query: 364 GADPNAKTW 372
PN T+
Sbjct: 381 DFSPNTVTY 389
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 96/252 (38%), Gaps = 39/252 (15%)
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
K + +P S Y +R L RV++EMK G TF L Y + L
Sbjct: 97 KQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTG-CEIRRGTFLILIESYAKFEL 155
Query: 245 FEKAERALKELENRNAHR-DLSAYQFLITLY--GQTGNLSEVYRIWRSLRLAFPN--TAN 299
F++A + +E + D Y FL+ + G L E+ R P+ T N
Sbjct: 156 FDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFN 215
Query: 300 I-------------------------------SYLNMIQVLVNLKDLPGAEKCFKEW-ES 327
I ++ ++Q + ++ GA + ++ +
Sbjct: 216 ILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAA 275
Query: 328 GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKL 387
GC + ++ V NV++ Y KEGR+E + G P+ T+ + R G +K
Sbjct: 276 GCPSSNVTV-NVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKH 334
Query: 388 AVDCLEKAIDTG 399
A++ L+ + G
Sbjct: 335 ALEILDVMLQEG 346
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 162/365 (44%), Gaps = 11/365 (3%)
Query: 41 QQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLV 100
+ +++ L+ + + V ++ LR R AL L + + + G++ + +D +
Sbjct: 318 EMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSL 377
Query: 101 AKVQGIDAAENYFVDLPET--SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSS 158
K + D AE F + + N +TY L++ +C+ + A + L +M ++ L S
Sbjct: 378 CKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSV 437
Query: 159 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 218
P+NSL+ + K G +++ EM + P TY M + I+ A R+ E
Sbjct: 438 YPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHE 497
Query: 219 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 278
M G V + + TF+ L S AGL A + E+ N + Y +I Y + G
Sbjct: 498 MTGKGIVPSIY-TFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEG 556
Query: 279 NLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE--WESGCATYDI 334
N+S+ + + + P+T SY +I L L K F + + C +I
Sbjct: 557 NMSKAFEFLNEMIEKGIVPDT--YSYRPLIHGLC-LTGQASEAKVFVDGLHKGNCELNEI 613
Query: 335 RVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
T ++ G + +EG+LE A + + RG D + + + D L++ D K+ + L++
Sbjct: 614 CYTGLLHG-FCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKE 672
Query: 395 AIDTG 399
D G
Sbjct: 673 MHDRG 677
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/382 (18%), Positives = 148/382 (38%), Gaps = 9/382 (2%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP--ETSKNHLTYGSLLNCYCKELM 138
ME G + + + +D + K Q + A DL E + +TY +L+ CK
Sbjct: 253 MEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQE 312
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
E ++++M L S +SL+ K G E+ +++ + + P+ + YN
Sbjct: 313 FEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNA 372
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
+ +L + AE + + M + G D T+S L ++ G + A L E+ +
Sbjct: 373 LIDSLCKGRNFDEAELLFDRMGKIGLCPND-VTYSILIDMFCRRGKLDTALSFLGEMIDM 431
Query: 259 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 318
+ Y LI + + G++S + + ++Y +++ + + A
Sbjct: 432 GLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKA 491
Query: 319 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 378
+ + E I ++ + G + +A +L PN T+ + +
Sbjct: 492 LRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEG 551
Query: 379 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 438
Y G+M A + L + I+ G VP + + R + A+ F++ L K
Sbjct: 552 YCEEGNMSKAFEFLNEMIEKG------IVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK 605
Query: 439 AVDDLGVEVFEPLIRTYAAAGR 460
+L + L+ + G+
Sbjct: 606 GNCELNEICYTGLLHGFCREGK 627
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 126/342 (36%), Gaps = 83/342 (24%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
T+ +LL+ + + A L +M E N+ + + +N ++ Y + G+ K + EM
Sbjct: 509 TFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEM 568
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
I+PD+Y+Y + L S A+ ++ + + G + ++ L + G
Sbjct: 569 IEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK-GNCELNEICYTGLLHGFCREGK 627
Query: 245 FEKAERALKELENRNAHRDLSAYQFLI----------------------------TLY-- 274
E+A +++ R DL Y LI +Y
Sbjct: 628 LEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTS 687
Query: 275 -----GQTGNLSEVYRIWRSL--RLAFPN----TANIS------YLNMIQVLVNLKDLPG 317
+TG+ E + IW + PN TA I+ ++N ++L + K PG
Sbjct: 688 MIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCS-KMRPG 746
Query: 318 AE-------KCF----------------------KEWESGCATYDIRVTNVMIGAYAKEG 348
CF K + ATY N++I + ++G
Sbjct: 747 NSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLANTATY-----NMLIRGFCRQG 801
Query: 349 RLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
R+E A EL R G P+ T+ R D+K A++
Sbjct: 802 RMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIE 843
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 120/289 (41%), Gaps = 13/289 (4%)
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+ +M I PD Y Y +R+L + D+S A+ +I +M+ G + ++ L
Sbjct: 214 LFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATG-CDVNIVPYNVLIDGL 272
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS-EVYRIWRSLRLAF-PNT 297
+ +A K+L + D+ Y L+ + + I LRL F P+
Sbjct: 273 CKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSE 332
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
A +S ++++ L + A K + +I V N +I + K + AE L
Sbjct: 333 AAVS--SLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLF 390
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 417
+R + G PN T+ I D + R G + A+ L + ID G PS + +
Sbjct: 391 DRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMG------LKPSVYPYNSLI 444
Query: 418 RHFEQEKDVDGAEGFL-EILKKAVDDLGVEVFEPLIRTYAAAGRTSPVM 465
+ D+ AE + E++ K ++ V + L+ Y + G+ + +
Sbjct: 445 NGHCKFGDISAAESLMAEMINKKLEPT-VVTYTSLMGGYCSKGKINKAL 492
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 96/228 (42%), Gaps = 15/228 (6%)
Query: 64 KLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLV-AKVQGIDAAENYFV-DL---PE 118
K +DRK++ L L + M RG+ D I+ ++ AK + D E + + DL
Sbjct: 659 KHKDRKVF---LGLLKEMHDRGLK---PDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEG 712
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
N +TY +++N CK +AE L KM+ N + + + + + K K
Sbjct: 713 CVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKA 772
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+ ++ ++ TYN+ +R + A +I M DG V+ D T++ + S
Sbjct: 773 VELHNAILKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDG-VSPDCITYTTMISE 831
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLI---TLYGQTGNLSEV 283
+KA + + D AY LI + G+ G +E+
Sbjct: 832 LCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATEL 879
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 99/254 (38%), Gaps = 9/254 (3%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+ YG L++ K + LL++M + L + + S++ +KTG ++ I
Sbjct: 648 VCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDL 707
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA- 242
M +P+ TY + L ++ AE + +M R G + T+ I +
Sbjct: 708 MINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKM-RPGNSVPNQVTYGCFLDILTKGV 766
Query: 243 GLFEKAERALKELEN---RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
G +KA EL N + + + Y LI + + G + E + + +
Sbjct: 767 GDMKKA----VELHNAILKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDC 822
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
I+Y MI L D+ A + + D N +I G + A EL+
Sbjct: 823 ITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNE 882
Query: 360 ARRRGADPNAKTWE 373
R+G PN +T E
Sbjct: 883 MLRQGLKPNTETSE 896
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 59/294 (20%), Positives = 111/294 (37%), Gaps = 11/294 (3%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y ++ C+ +A+ ++ +M+ + +P+N L+ K + I +++
Sbjct: 230 YTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLA 289
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
+ PD TY + L V + +I+EM R R + S+L + G
Sbjct: 290 GKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRL-RFSPSEAAVSSLVEGLRKRGKV 348
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW-RSLRLAF-PNTANISYL 303
E+A +K + ++ Y LI + N E ++ R ++ PN +++Y
Sbjct: 349 EEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPN--DVTYS 406
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I + L A E + N +I + K G + AE L +
Sbjct: 407 ILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINK 466
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 417
+P T+ Y G + A+ + TG+G VPS T T +
Sbjct: 467 KLEPTVVTYTSLMGGYCSKGKINKALRLYHEM--TGKG----IVPSIYTFTTLL 514
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 51/134 (38%), Gaps = 1/134 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TYG L+ K + K L L ++ +N L+ + + G E+ +I
Sbjct: 751 NQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLANTATYNMLIRGFCRQGRMEEASELI 810
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M + PD TY + L ND+ A + M G + D ++ L
Sbjct: 811 TRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKG-IRPDRVAYNTLIHGCCV 869
Query: 242 AGLFEKAERALKEL 255
AG KA E+
Sbjct: 870 AGEMGKATELRNEM 883
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 133/303 (43%), Gaps = 3/303 (0%)
Query: 83 KRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTE 140
+R + TV + + + + +DA + + ++ + + TYG+L+ +C+ E
Sbjct: 213 RRSVQPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRME 272
Query: 141 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 200
A + +M++ + +++ F +L+ + K G+ + Q+M+ +MPD YN +
Sbjct: 273 NAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALV 332
Query: 201 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 260
L ++ AE ++EEMK G + D T++ L + G + A +++ +
Sbjct: 333 NGLCRARNLKAAESIVEEMKNAG-LKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEV 391
Query: 261 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 320
D Y LI+ + G + R+ R + A N +Y +I D+ K
Sbjct: 392 SLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFK 451
Query: 321 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 380
KE ++ + NV++ K G+++NA+ L G P+ T+ I D
Sbjct: 452 LLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQC 511
Query: 381 RNG 383
++G
Sbjct: 512 KHG 514
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/258 (19%), Positives = 104/258 (40%), Gaps = 17/258 (6%)
Query: 174 PEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFS 233
PE +Q + A + P++ +NV MR + ++ A +V +EM+R V TF+
Sbjct: 168 PEAYTFYLQLLDAG-MAPETRLFNVLMRDFVRLGELVSARKVFDEMRRS--VQPTVVTFN 224
Query: 234 NLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 293
L S A + + KE+ + D+ Y LI + +TG + +++ +R
Sbjct: 225 TLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDT 284
Query: 294 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
N + + +I ++ +++ D+ N ++ + L+ A
Sbjct: 285 GVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAA 344
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK--------------AIDTG 399
E + E + G P+ T+ D ++G + +A+D +K A+ +G
Sbjct: 345 ESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISG 404
Query: 400 RGDGGKWVPSSETIRTFM 417
G+ V + +R M
Sbjct: 405 LSKAGRPVDAERVLREMM 422
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 95/243 (39%), Gaps = 1/243 (0%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
FN+L++ + + + + +EM + PD YTY ++ + A ++ EM
Sbjct: 223 FNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEM- 281
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
RD V + F+ L + + G +++ R DL AY L+ + NL
Sbjct: 282 RDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNL 341
Query: 281 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 340
I ++ A ++Y +I L A ++ + D +
Sbjct: 342 KAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTAL 401
Query: 341 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 400
I +K GR +AE + +P+ T+ + D + R GD+K L++ + G+
Sbjct: 402 ISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGK 461
Query: 401 GDG 403
G
Sbjct: 462 KPG 464
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/276 (18%), Positives = 117/276 (42%), Gaps = 1/276 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+T+ +L++ C+ + + L ++M ++ + + +L+ + +TG E + E
Sbjct: 221 VTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNE 280
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ + + P++ + + A +++ + ++M+ G V D ++ L + A
Sbjct: 281 MRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRG-VMPDLVAYNALVNGLCRAR 339
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
+ AE ++E++N D Y LI + G L I + + + ++Y
Sbjct: 340 NLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYT 399
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I L AE+ +E D ++I A+ ++G ++ +L + + +
Sbjct: 400 ALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNK 459
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
G P T+ + + + G MK A L ++ G
Sbjct: 460 GKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIG 495
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 150/328 (45%), Gaps = 3/328 (0%)
Query: 76 KLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLNCY 133
K ++M G+ ++V I +D + K ++ A + F + E + + +TY SL++ +
Sbjct: 42 KFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGH 101
Query: 134 CKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDS 193
K + ++ + E+MK+ + + +N+L+ + K K + EMKA+ + P+
Sbjct: 102 GKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNV 161
Query: 194 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 253
TY+ ++ A + A + +M+R ++T +++L +AG +A + ++
Sbjct: 162 VTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFT-YTSLIDANCKAGNLAEALKLVE 220
Query: 254 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLK 313
E+ ++ Y L+ + G + E ++R++ A +Y ++ + K
Sbjct: 221 EILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAK 280
Query: 314 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 373
++ A+ KE + C D+ + ++ E RLE A+ L + G + NA +
Sbjct: 281 EMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYT 340
Query: 374 IFSDYYLRNGDMKLAVDCLEKAIDTGRG 401
D Y ++G A+ LE+ +D G
Sbjct: 341 TLMDAYFKSGQATEALTLLEEMLDLVDG 368
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 121/301 (40%), Gaps = 7/301 (2%)
Query: 138 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 197
M E+A KM++ + N+L+ +K G + ++M A+ I +TYN
Sbjct: 1 MLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYN 60
Query: 198 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 257
+ + L D+ A + +MK G D T+++L + + GL ++ +++++
Sbjct: 61 IMIDYLCKEGDLEMARSLFTQMKEAG-FTPDIVTYNSLIDGHGKLGLLDECICIFEQMKD 119
Query: 258 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 317
+ D+ Y LI + + + + + ++ ++Y I L
Sbjct: 120 ADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQE 179
Query: 318 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 377
A K F + T + +I A K G L A +L E + G N T+ D
Sbjct: 180 AIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLD 239
Query: 378 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 437
G MK A + ++ G P+ ET + F + K+++ A+ L+ +K
Sbjct: 240 GLCEEGRMKEAEEVFRAMLNAG------VAPNQETYTALVHGFIKAKEMEYAKDILKEMK 293
Query: 438 K 438
+
Sbjct: 294 E 294
>gi|302753732|ref|XP_002960290.1| hypothetical protein SELMODRAFT_73828 [Selaginella moellendorffii]
gi|300171229|gb|EFJ37829.1| hypothetical protein SELMODRAFT_73828 [Selaginella moellendorffii]
Length = 546
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 114/515 (22%), Positives = 210/515 (40%), Gaps = 71/515 (13%)
Query: 24 ALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTL------KKLRDRKLYYP---- 73
AL+D + +KG S+ N LK+ R +WE+ + L K L K +
Sbjct: 10 ALHDWMIEKGGYAPSIFA-YNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFTFSTLIS 68
Query: 74 ----------ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SK 121
A+ + ME G+ + + ++L KV+ A + F L + +
Sbjct: 69 GYGRANRLEDAMGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKASGIAP 128
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ + Y S++N Y K ++A+ LL +MKE L ++ + L+ YA++ + +
Sbjct: 129 DKVIYNSMINLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLEAKQVF 188
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EMK I D T N+ + + + AE + M + + + T++ + +Y E
Sbjct: 189 LEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEELFWSMSKTLGIQQNVVTYNTMIKVYKE 248
Query: 242 AGLF------------------------------------EKAERALKELENRNAHRDLS 265
A L EKA R +++++ R +
Sbjct: 249 AELLSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHEKAMRLVRKMQQRGIEPNAV 308
Query: 266 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 325
Y LI++YG+TG ++++LR I Y +MI V + A++ +E
Sbjct: 309 TYSTLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQSMIVVYERAGLVAHAKRLLEEL 368
Query: 326 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 385
+ DI + I AK +LE A +L R+ G + T++ ++RN
Sbjct: 369 KQP----DIVPRDTAISILAKAEKLEEAAKLYWRSHEAGEIKESVTYKSMIQLFVRNKRS 424
Query: 386 KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGV 445
K A+D E ++G ++P SET + + Q + ++ AE +++ L
Sbjct: 425 KNAIDVFENMRESG------FLPDSETTVVLLAAYGQLRQLEDAEKLYLDMRERGCTLEK 478
Query: 446 EVFEPLIRTYAAAG--RTSPVMLRRLKMEKVEVSE 478
EV +++ Y A R + M LK+E ++ E
Sbjct: 479 EVHFQMLKLYGDARKIREAEDMFAALKLEGLDGDE 513
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 159/362 (43%), Gaps = 24/362 (6%)
Query: 106 IDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNS 163
+ A N F + ET+ N +T+ +L+N C+E +A ALL++M E L + + + +
Sbjct: 165 VSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224
Query: 164 LMTLYAKTGHPEKIPAIIQEM-KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRD 222
++ K G ++++M + S I+P+ Y+ + +L S A+ + EM+
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284
Query: 223 GRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 282
G + D T++++ + +G + AE+ L+E+ R D+ Y LI + + G E
Sbjct: 285 G-IFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE 343
Query: 283 VYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 340
++ + R PNT I+Y +MI L AE F + + ++ N +
Sbjct: 344 AEELYDEMLPRGIIPNT--ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTL 401
Query: 341 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 400
I Y R+++ EL G + T+ + GD+ A+D L++ I +G
Sbjct: 402 IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG- 460
Query: 401 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDL-------GVEVFEPLIR 453
P T T + + A ++++K+ DL GV EP ++
Sbjct: 461 -----LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGV---EPDVQ 512
Query: 454 TY 455
TY
Sbjct: 513 TY 514
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 165/379 (43%), Gaps = 23/379 (6%)
Query: 77 LSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE-TSKNHLTYGSLLNCYCK 135
L E +E++ V+ A+ V + + +A E Y LP N +TY S+++ +CK
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372
Query: 136 ELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYT 195
+ + AE + M + + FN+L+ Y + ++ EM + ++ D+ T
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432
Query: 196 YNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG-------LFEKA 248
YN + V D++ A +++EM G + D T L + G +F+
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSG-LCPDIVTCDTLLDGLCDNGKLKDALEMFKVM 491
Query: 249 ERALKELENRNAHR----DLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISY 302
+++ K+L+ + D+ Y LI+ G E ++ + R P+T I+Y
Sbjct: 492 QKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT--ITY 549
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+MI L L A + F S + ++ +I Y K GR+++ EL R
Sbjct: 550 SSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGR 609
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ 422
RG NA T+ + + G++ A+D ++ I +G P + TIR +
Sbjct: 610 RGIVANAITYITLICGFRKVGNINGALDIFQEMISSG------VYPDTITIRNMLTGLWS 663
Query: 423 EKDVDGAEGFLEILKKAVD 441
++++ A LE L+ ++D
Sbjct: 664 KEELKRAVAMLEKLQMSMD 682
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/402 (19%), Positives = 152/402 (37%), Gaps = 21/402 (5%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK---NHLTYGSLL 130
A+ L + M + G+ T +D + K +A N + E S N + Y +++
Sbjct: 203 AVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAII 262
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
+ CK+ A+ L +M+E + +NS++ + +G ++QEM I
Sbjct: 263 DSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKIS 322
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
PD TYN + A AE + +EM G + + T+S++ + + + AE
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRG-IIPNTITYSSMIDGFCKQNRLDAAEH 381
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
+ + +L + LI Y + + + + +Y +I
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR-------- 362
+ DL A +E S DI + ++ G+L++A E+ + ++
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501
Query: 363 ---RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
G +P+ +T+ I + G A + E+ G VP + T + +
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG------IVPDTITYSSMIDG 555
Query: 420 FEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 461
++ +D A + + V F LI Y AGR
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 159/362 (43%), Gaps = 24/362 (6%)
Query: 106 IDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNS 163
+ A N F + ET+ N +T+ +L+N C+E +A ALL++M E L + + + +
Sbjct: 165 VSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224
Query: 164 LMTLYAKTGHPEKIPAIIQEM-KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRD 222
++ K G ++++M + S I+P+ Y+ + +L S A+ + EM+
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284
Query: 223 GRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 282
G + D T++++ + +G + AE+ L+E+ R D+ Y LI + + G E
Sbjct: 285 G-IFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE 343
Query: 283 VYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 340
++ + R PNT I+Y +MI L AE F + + ++ N +
Sbjct: 344 AEELYDEMLPRGIIPNT--ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTL 401
Query: 341 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 400
I Y R+++ EL G + T+ + GD+ A+D L++ I +G
Sbjct: 402 IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG- 460
Query: 401 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDL-------GVEVFEPLIR 453
P T T + + A ++++K+ DL GV EP ++
Sbjct: 461 -----LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGV---EPDVQ 512
Query: 454 TY 455
TY
Sbjct: 513 TY 514
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 165/379 (43%), Gaps = 23/379 (6%)
Query: 77 LSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE-TSKNHLTYGSLLNCYCK 135
L E +E++ V+ A+ V + + +A E Y LP N +TY S+++ +CK
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372
Query: 136 ELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYT 195
+ + AE + M + + FN+L+ Y + ++ EM + ++ D+ T
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432
Query: 196 YNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG-------LFEKA 248
YN + V D++ A +++EM G + D T L + G +F+
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSG-LCPDIVTCDTLLDGLCDNGKLKDALEMFKVM 491
Query: 249 ERALKELENRNAHR----DLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISY 302
+++ K+L+ + D+ Y LI+ G E ++ + R P+T I+Y
Sbjct: 492 QKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT--ITY 549
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+MI L L A + F S + ++ +I Y K GR+++ EL R
Sbjct: 550 SSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGR 609
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ 422
RG NA T+ + + G++ A+D ++ I +G P + TIR +
Sbjct: 610 RGIVANAITYITLICGFRKVGNINGALDIFQEMISSG------VYPDTITIRNMLTGLWS 663
Query: 423 EKDVDGAEGFLEILKKAVD 441
++++ A LE L+ ++D
Sbjct: 664 KEELKRAVAMLEKLQMSMD 682
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/402 (19%), Positives = 152/402 (37%), Gaps = 21/402 (5%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK---NHLTYGSLL 130
A+ L + M + G+ T +D + K +A N + E S N + Y +++
Sbjct: 203 AVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAII 262
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
+ CK+ A+ L +M+E + +NS++ + +G ++QEM I
Sbjct: 263 DSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKIS 322
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
PD TYN + A AE + +EM G + + T+S++ + + + AE
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRG-IIPNTITYSSMIDGFCKQNRLDAAEH 381
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
+ + +L + LI Y + + + + +Y +I
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR-------- 362
+ DL A +E S DI + ++ G+L++A E+ + ++
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501
Query: 363 ---RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
G +P+ +T+ I + G A + E+ G VP + T + +
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG------IVPDTITYSSMIDG 555
Query: 420 FEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 461
++ +D A + + V F LI Y AGR
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 122/256 (47%), Gaps = 5/256 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N TYG+L+N +CK E AE LL M+ +G + + FN+++ Y + G +K I
Sbjct: 272 NERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIK 331
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M+ I D YTYN L VN + A++++ M +G V +++ +++ L SI+ +
Sbjct: 332 AVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENG-VESNYVSYTTLISIHSK 390
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTAN 299
G +A R +++E + + + Y +I Y ++G++ E R + + + P+
Sbjct: 391 EGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYT 450
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+ L + D+ A + F+E + A ++ +I AKEGR E A + +
Sbjct: 451 YAALVHGHCVNGKVDV--ALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDN 508
Query: 360 ARRRGADPNAKTWEIF 375
G P+ + +
Sbjct: 509 MLAAGLTPDDTLYSML 524
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 108/262 (41%), Gaps = 1/262 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
L+ +++ +CK + A LL++M + ++ +N L+ Y + + ++ +++E
Sbjct: 134 LSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKE 193
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M++ + P TY + + L+ DIS E V +E+KR VA D +S + + Y AG
Sbjct: 194 MESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRK-NVAGDVYFYSAVINAYCRAG 252
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
+A E + Y LI + + G + + ++L I +
Sbjct: 253 NVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFN 312
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
MI + A + E D+ N + + R+E+A++L
Sbjct: 313 TMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTEN 372
Query: 364 GADPNAKTWEIFSDYYLRNGDM 385
G + N ++ + + GDM
Sbjct: 373 GVESNYVSYTTLISIHSKEGDM 394
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/344 (19%), Positives = 131/344 (38%), Gaps = 50/344 (14%)
Query: 94 AIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCK--------ELMTE--- 140
++ +D K +D A ++P N Y LL+ Y + E++ E
Sbjct: 137 SVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMES 196
Query: 141 ------------------------KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK 176
K E++ +++K N+ +++++ Y + G+ +
Sbjct: 197 GGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRR 256
Query: 177 IPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLA 236
+ E + I P+ TY + + I AE ++ +M+ G V + F+ +
Sbjct: 257 ASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRG-VGHNQIIFNTMI 315
Query: 237 SIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPN 296
Y G+ +KA +E D+ Y L L V R+ + +L
Sbjct: 316 DGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLAC------GLCRVNRMEDAKKLLHIM 369
Query: 297 TAN------ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRL 350
T N +SY +I + D+ A + F++ E + + NVMI Y K G +
Sbjct: 370 TENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSI 429
Query: 351 ENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
AE K+ ++G P+ T+ + NG + +A+ E+
Sbjct: 430 REAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEE 473
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 62/132 (46%), Gaps = 2/132 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
A +L +ME +G +V + +D K I AE + ++ + + TY +L++
Sbjct: 397 ARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVH 456
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C + A L E+MK+ + + + +L++ AK G E+ M A+ + P
Sbjct: 457 GHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNMLAAGLTP 516
Query: 192 DSYTYNVWMRAL 203
D Y++ + +L
Sbjct: 517 DDTLYSMLVGSL 528
>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1023
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 172/390 (44%), Gaps = 10/390 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLN 131
A L M RG++ + +D + KV AE F + + + N +TY +LL+
Sbjct: 410 AFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLD 469
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
YCK E AE +L+KM++ ++ + + F+S++ YAK G K +++EM ++MP
Sbjct: 470 GYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMP 529
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
++ Y + + + A+ +EMK R+ F L + G ++A
Sbjct: 530 NTIVYAILIDGYFKAGEQDVADDFCKEMKSR-RLEESNVIFDILLNNLKRVGRMDEARSL 588
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
+ ++ ++ D+ Y LI Y + GN I + ++ ++Y +I+ L+
Sbjct: 589 IIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLR 648
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
L C + E G A D N +I Y +G+ E+A ++ + G PNA T
Sbjct: 649 LGKYDPRYVCSRMIELGLAP-DCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVT 707
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG 431
+ I + G ++ A L++ + ++VP+ T + ++ + + + D
Sbjct: 708 YNILIGGLCKTGAVEKAESALDEMLVM------EFVPTPITHKFLVKAYSRSEKADKILQ 761
Query: 432 FLEILKKAVDDLGVEVFEPLIRTYAAAGRT 461
E L + +L + V+ LI + G T
Sbjct: 762 IHEKLVASGLELSLTVYNTLITVFCRLGMT 791
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 131/312 (41%), Gaps = 48/312 (15%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL--PETSKNHLTYGSLLN 131
AL + M+ G+ I + + K ++ AE+ ++ E +T+ L+
Sbjct: 689 ALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVK 748
Query: 132 CYCKELMTEKAEALL---EKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS 188
Y + +EKA+ +L EK+ L S +N+L+T++ + G K ++ EM
Sbjct: 749 AYSR---SEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRG 805
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL---- 244
I D TYN +R + + A + +M DG +A + TT++ L AGL
Sbjct: 806 ISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDG-IAPNITTYNTLLGGLSNAGLMEEM 864
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
E+ E+ + E+ R + + Y L++ YG+ GN + I ++
Sbjct: 865 MEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTI---------------ILHIE 909
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
MI K + TY NV+I YAK G++ A EL +G
Sbjct: 910 MIT---------------KGFVPTLKTY-----NVLISDYAKSGKMIEARELLNDLLTKG 949
Query: 365 ADPNAKTWEIFS 376
PN+ T++I +
Sbjct: 950 RIPNSFTYDILT 961
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 129/321 (40%), Gaps = 47/321 (14%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +++N YC + TE A +L +MK + +++ +N L+ KTG EK + + E
Sbjct: 671 ITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDE 730
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M +P T+ ++A + ++ E++ G + T ++ L +++ G
Sbjct: 731 MLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASG-LELSLTVYNTLITVFCRLG 789
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
+ KA+ L E+ R DL Y LI Y ++ + + + +
Sbjct: 790 MTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQM------------- 836
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEG----RLENAEELKER 359
+ G A +I N ++G + G +E E+L
Sbjct: 837 ---------------------FVDGIAP-NITTYNTLLGGLSNAGLMEEMMEETEKLVSE 874
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
RG PNA T++I Y R G+ K + + I G +VP+ +T +
Sbjct: 875 MNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKG------FVPTLKTYNVLISD 928
Query: 420 FEQE-KDVDGAEGFLEILKKA 439
+ + K ++ E ++L K
Sbjct: 929 YAKSGKMIEARELLNDLLTKG 949
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/273 (19%), Positives = 110/273 (40%), Gaps = 36/273 (13%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
NH++Y +++N K +A L +M + F + ++M K G ++ +
Sbjct: 390 NHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVF 449
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+ + ++ P+ TY+ + + + AE V+++M+++ V + TFS++ + Y +
Sbjct: 450 ETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKE-HVPPNVITFSSIINGYAK 508
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G+ KA L+E+ RN + Y LI Y + G
Sbjct: 509 KGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQ--------------------- 547
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
++ D E + E +DI + N+ + GR++ A L
Sbjct: 548 ---------DVADDFCKEMKSRRLEESNVIFDILLNNL-----KRVGRMDEARSLIIDMY 593
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
+G DP+ + D Y + G+ A+ +++
Sbjct: 594 SKGIDPDIVNYASLIDGYFKEGNQLAALSIVQE 626
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 123/327 (37%), Gaps = 69/327 (21%)
Query: 66 RDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLT 125
R R+ +YP + +T S Q IH D + +P T K HL
Sbjct: 25 RLRRFFYPT----------PITRTFSSQ-IHKDSIF--------------IPPT-KTHLY 58
Query: 126 ---YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPF-NSLMTLYAKTGHPEKIPAII 181
+ +L+ Y A A M+ L L ++PF N+L+ + +G ++ +
Sbjct: 59 VSFFCTLIRLYLTHDRFSTASATFSHMRALGL-VPTLPFWNTLLYQFNASGLVSQVKLMY 117
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+M ++PD ++ NV + +L V D+ A + ++ + V D T++ + + +
Sbjct: 118 SDMLFCGVVPDVFSVNVLVHSLCKVGDLDLA---LGYLRNNDVVDIDNVTYNTVIWGFCQ 174
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
GL ++ L E+ R D L+ Y + G + Y W
Sbjct: 175 KGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQ--YAEW-------------- 218
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
V+ NL D G T D+ N +I Y + G + A EL E +
Sbjct: 219 ------VMYNLVD-------------GGVTKDVIGLNTLIDGYCEAGLMSQATELIENSW 259
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLA 388
R + T+ + + GD+ A
Sbjct: 260 RSDVKIDIVTYNTLLKAFCKTGDLTRA 286
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/291 (19%), Positives = 119/291 (40%), Gaps = 18/291 (6%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ +T L+ YC+ + + AE ++ + + + + N+L+ Y + G + +I
Sbjct: 196 DSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELI 255
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE----------MKRDGRVAAD--- 228
+ S + D TYN ++A D++ AE + E +K + V +
Sbjct: 256 ENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIK 315
Query: 229 -----WTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 283
T++ L + Y + E++ K++ D+ ++ + + G L+E
Sbjct: 316 NLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEA 375
Query: 284 YRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGA 343
++R + + ++SY +I L + A + ++DI ++
Sbjct: 376 AVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDG 435
Query: 344 YAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
K G+ + AEE+ E + PN T+ D Y + G M+LA L+K
Sbjct: 436 LFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQK 486
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 159/362 (43%), Gaps = 24/362 (6%)
Query: 106 IDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNS 163
+ A N F + ET+ N +T+ +L+N C+E +A ALL++M E L + + + +
Sbjct: 165 VSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224
Query: 164 LMTLYAKTGHPEKIPAIIQEM-KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRD 222
++ K G ++++M + S I+P+ Y+ + +L S A+ + EM+
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284
Query: 223 GRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 282
G + D T++++ + +G + AE+ L+E+ R D+ Y LI + + G E
Sbjct: 285 G-IFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE 343
Query: 283 VYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 340
++ + R PNT I+Y +MI L AE F + + ++ N +
Sbjct: 344 AEELYDEMLPRGIIPNT--ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTL 401
Query: 341 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 400
I Y R+++ EL G + T+ + GD+ A+D L++ I +G
Sbjct: 402 IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG- 460
Query: 401 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDL-------GVEVFEPLIR 453
P T T + + A ++++K+ DL GV EP ++
Sbjct: 461 -----LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGV---EPDVQ 512
Query: 454 TY 455
TY
Sbjct: 513 TY 514
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 165/379 (43%), Gaps = 23/379 (6%)
Query: 77 LSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE-TSKNHLTYGSLLNCYCK 135
L E +E++ V+ A+ V + + +A E Y LP N +TY S+++ +CK
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372
Query: 136 ELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYT 195
+ + AE + M + + FN+L+ Y + ++ EM + ++ D+ T
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432
Query: 196 YNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG-------LFEKA 248
YN + V D++ A +++EM G + D T L + G +F+
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSG-LCPDIVTCDTLLDGLCDNGKLKDALEMFKVM 491
Query: 249 ERALKELENRNAHR----DLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISY 302
+++ K+L+ + D+ Y LI+ G E ++ + R P+T I+Y
Sbjct: 492 QKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT--ITY 549
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+MI L L A + F S + ++ +I Y K GR+++ EL R
Sbjct: 550 SSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGR 609
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ 422
RG NA T+ + + G++ A+D ++ I +G P + TIR +
Sbjct: 610 RGIVANAITYITLICGFRKVGNINGALDIFQEMISSG------VYPDTITIRNMLTGLWS 663
Query: 423 EKDVDGAEGFLEILKKAVD 441
++++ A LE L+ ++D
Sbjct: 664 KEELKRAVAMLEKLQMSMD 682
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/402 (19%), Positives = 152/402 (37%), Gaps = 21/402 (5%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK---NHLTYGSLL 130
A+ L + M + G+ T +D + K +A N + E S N + Y +++
Sbjct: 203 AVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAII 262
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
+ CK+ A+ L +M+E + +NS++ + +G ++QEM I
Sbjct: 263 DSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKIS 322
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
PD TYN + A AE + +EM G + + T+S++ + + + AE
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRG-IIPNTITYSSMIDGFCKQNRLDAAEH 381
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
+ + +L + LI Y + + + + +Y +I
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR-------- 362
+ DL A +E S DI + ++ G+L++A E+ + ++
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501
Query: 363 ---RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
G +P+ +T+ I + G A + E+ G VP + T + +
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG------IVPDTITYSSMIDG 555
Query: 420 FEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 461
++ +D A + + V F LI Y AGR
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 160/362 (44%), Gaps = 24/362 (6%)
Query: 106 IDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNS 163
+ A ++F + ET+ N +T+ +L+N C+E +A ALL++M E L + + + +
Sbjct: 165 VSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224
Query: 164 LMTLYAKTGHPEKIPAIIQEM-KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRD 222
++ K G ++++M + S I+P+ Y+ + +L S A+ + EM+
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284
Query: 223 GRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 282
G + D T++++ + +G + AE+ L+E+ R D+ Y LI + + G E
Sbjct: 285 G-IFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE 343
Query: 283 VYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 340
++ + R PNT I+Y +MI L AE F + + ++ N +
Sbjct: 344 AEELYDEMLPRGIIPNT--ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTL 401
Query: 341 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 400
I Y R+++ EL G + T+ + GD+ A+D L++ I +G
Sbjct: 402 IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG- 460
Query: 401 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDL-------GVEVFEPLIR 453
P T T + + A ++++K+ DL GV EP ++
Sbjct: 461 -----LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGV---EPDVQ 512
Query: 454 TY 455
TY
Sbjct: 513 TY 514
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 165/379 (43%), Gaps = 23/379 (6%)
Query: 77 LSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE-TSKNHLTYGSLLNCYCK 135
L E +E++ V+ A+ V + + +A E Y LP N +TY S+++ +CK
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372
Query: 136 ELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYT 195
+ + AE + M + + FN+L+ Y + ++ EM + ++ D+ T
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432
Query: 196 YNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG-------LFEKA 248
YN + V D++ A +++EM G + D T L + G +F+
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSG-LCPDIVTCDTLLDGLCDNGKLKDALEMFKVM 491
Query: 249 ERALKELENRNAHR----DLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISY 302
+++ K+L+ + D+ Y LI+ G E ++ + R P+T I+Y
Sbjct: 492 QKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT--ITY 549
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+MI L L A + F S + ++ +I Y K GR+++ EL R
Sbjct: 550 SSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGR 609
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ 422
RG NA T+ + + G++ A+D ++ I +G P + TIR +
Sbjct: 610 RGIVANAITYITLICGFRKVGNINGALDIFQEMISSG------VYPDTITIRNMLTGLWS 663
Query: 423 EKDVDGAEGFLEILKKAVD 441
++++ A LE L+ ++D
Sbjct: 664 KEELKRAVAMLEKLQMSMD 682
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 79/402 (19%), Positives = 152/402 (37%), Gaps = 21/402 (5%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK---NHLTYGSLL 130
A+ L + M + G+ T +D + K +A N + E S N + Y +++
Sbjct: 203 AVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAII 262
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
+ CK+ A+ L +M+E + +NS++ + +G ++QEM I
Sbjct: 263 DSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKIS 322
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
PD TYN + A AE + +EM G + + T+S++ + + + AE
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRG-IIPNTITYSSMIDGFCKQNRLDAAEH 381
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
+ + +L + LI Y + + + + +Y +I
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR-------- 362
+ DL A +E S DI + ++ G+L++A E+ + ++
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501
Query: 363 ---RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
G +P+ +T+ I + G A + E+ G VP + T + +
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG------IVPDTITYSSMIDG 555
Query: 420 FEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 461
++ +D A + + V F LI Y AGR
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597
>gi|356569143|ref|XP_003552765.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Glycine max]
Length = 658
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 124/280 (44%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + K + + + L++M++ N+ + +++L+ L K K +
Sbjct: 167 SPDRYTYSTLITSFGKHGLFDSSLFWLQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAIS 226
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +KAS+I PD YN + A +++EM RD V D ++S L +IY
Sbjct: 227 IFSRLKASTISPDLIAYNSMINVFGKAKLFREARLLLQEM-RDNAVQPDTVSYSTLLAIY 285
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
V+ F +A E+ DL+ +I +YGQ E R++ S+R
Sbjct: 286 VDNQKFVEALSLFFEMNEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNV 345
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V A F+ +S ++ N MI Y K E A L +
Sbjct: 346 VSYNTLLRVYGEADLFGEAIHLFRLMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQE 405
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
++RG +PNA T+ + + G + A +K +G
Sbjct: 406 MKKRGIEPNAITYSTIISIWEKAGKLDRAAILFQKLRSSG 445
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 123/260 (47%), Gaps = 14/260 (5%)
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
+ +N +TY +++N Y K L EKA L+++MK+ + +++ ++++++++ K G ++
Sbjct: 375 DVQQNVVTYNTMINIYGKTLEHEKATNLIQEMKKRGIEPNAITYSTIISIWEKAGKLDRA 434
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
+ Q++++S + D Y + A ++ A+R++ E+KR + D
Sbjct: 435 AILFQKLRSSGVRIDEVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD-----TAIG 489
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FP 295
I AG E+A ++ + +D+S + +I L+ + V ++ +R+ FP
Sbjct: 490 ILARAGRIEEATWVFRQAFDAREVKDISVFGCMINLFSKNKKYGNVVEVFEKMRVVGYFP 549
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAE 354
++ I+ + + L++ A+ +++ E GC D V M+ Y E
Sbjct: 550 DSDVIALV--LNAFGKLREFDKADALYRQMHEEGCVFPD-EVHFQMLSLYGARKDFVMVE 606
Query: 355 ELKERARRRGADPNAKTWEI 374
L E+ ++PN E+
Sbjct: 607 SLFEKL---DSNPNINKKEL 623
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/390 (18%), Positives = 166/390 (42%), Gaps = 26/390 (6%)
Query: 11 KNIAKRSKKHLEEALYDRLFKKG-SSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRK 69
+N+ + + HL L+D + +KG S D ++ +
Sbjct: 143 RNVLRAKQWHLAHGLFDEMRQKGLSPD------------------RYTYSTLITSFGKHG 184
Query: 70 LYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYG 127
L+ +L + ME+ ++ + + +DL K+ A + F L + S + + Y
Sbjct: 185 LFDSSLFWLQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTISPDLIAYN 244
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 187
S++N + K + +A LL++M++ + ++ +++L+ +Y + ++ EM +
Sbjct: 245 SMINVFGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFFEMNEA 304
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
D T N+ + ++ A+R+ M++ G + + +++ L +Y EA LF +
Sbjct: 305 KCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMG-IQPNVVSYNTLLRVYGEADLFGE 363
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 307
A + +++++ +++ Y +I +YG+T + + + ++ I+Y +I
Sbjct: 364 AIHLFRLMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMKKRGIEPNAITYSTIIS 423
Query: 308 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
+ L A F++ S D + MI AY + G + +A+ L +R P
Sbjct: 424 IWEKAGKLDRAAILFQKLRSSGVRIDEVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIP 483
Query: 368 NAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
I + R G ++ A +A D
Sbjct: 484 RDTAIGILA----RAGRIEEATWVFRQAFD 509
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/331 (20%), Positives = 128/331 (38%), Gaps = 54/331 (16%)
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
P + YNV +R + A + +EM++ G ++ D T+S L + + + GLF+ +
Sbjct: 133 PSLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKG-LSPDRYTYSTLITSFGKHGLFDSSLF 191
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR--------LAFPNTAN--- 299
L+++E N DL Y LI L + + S+ I+ L+ +A+ + N
Sbjct: 192 WLQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTISPDLIAYNSMINVFG 251
Query: 300 ------------------------ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 335
+SY ++ + V+ + A F E D+
Sbjct: 252 KAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFFEMNEAKCPLDLT 311
Query: 336 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 395
N+MI Y + + A+ L R+ G PN ++ Y G+ D +A
Sbjct: 312 TCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVVSYNTLLRVY---GE----ADLFGEA 364
Query: 396 IDTGRGDGGK-----WVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEP 450
I R K V + I + + E EK A ++ +KK + +
Sbjct: 365 IHLFRLMQSKDVQQNVVTYNTMINIYGKTLEHEK----ATNLIQEMKKRGIEPNAITYST 420
Query: 451 LIRTYAAAGRT--SPVMLRRLKMEKVEVSEA 479
+I + AG+ + ++ ++L+ V + E
Sbjct: 421 IISIWEKAGKLDRAAILFQKLRSSGVRIDEV 451
>gi|357110688|ref|XP_003557148.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27270-like [Brachypodium distachyon]
Length = 1038
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 112/241 (46%), Gaps = 2/241 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N TY ++ Y KE + E+A + KMK ++ L++L A+ G E+ +
Sbjct: 279 NQFTYTIVIGSYVKESLLEEAMNVWRKMKRSRFVPEEATYSGLISLSARHGRGEQALGLY 338
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+EM+A I+P +YT + D S A + EM++ R+ D + L IY +
Sbjct: 339 EEMRAHGIVPSNYTCASLLSLYYKTEDYSKALSLFAEMEQS-RIVPDEVIYGILVRIYGK 397
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
GL+E A+ +E++ + D Y + ++ GN ++ S+RL + S
Sbjct: 398 VGLYEDAQCTFEEIDRADLLSDEQTYVAMAQVHMNAGNYDRALQVLDSMRLRNVEPSLFS 457
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +++ V +D+ AE F+ S C D+ N ++ Y K G+LE A L + R
Sbjct: 458 YSAVLRCHVAKEDIAAAEDAFRAL-SKCGIPDVFCCNDLLRLYVKLGQLEKASALILKLR 516
Query: 362 R 362
+
Sbjct: 517 K 517
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 109/230 (47%), Gaps = 3/230 (1%)
Query: 62 LKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS- 120
+K + + Y A+ + + M G+ +++ I + + + +D A F E
Sbjct: 754 IKSMLESGKLYSAVSIHDRMISSGIPQSLQTFNIMISVYGQGGKLDKATEMFTAAQELGL 813
Query: 121 -KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
+ TY ++L+ Y K + A L +MKE + + FNS++ +YA +G +K
Sbjct: 814 RIDEKTYTNMLSFYGKAGRHQDASVLFTRMKEEGIMPGKISFNSMVNVYATSGLHDKAKF 873
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +EM++S +P+S TY ++A S AE I +M + F++L +
Sbjct: 874 IFEEMQSSGQIPESLTYLALIKAYTEGRSYSKAEEAI-QMMLTSNITLSCPHFNHLIFAF 932
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS 289
++ G ++A R E+E+ DL+ + ++ +Y + G SE ++++
Sbjct: 933 LKEGKIDEARRICNEMEDLGVAPDLACCRTMMRVYLEYGCCSEGISLFKT 982
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/381 (17%), Positives = 134/381 (35%), Gaps = 43/381 (11%)
Query: 77 LSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKE 136
L E + + G+ S A + ++Q + AE F Y ++++ CK
Sbjct: 631 LHEQLNELGVKPEDSATATLIVQYGQLQKLQQAEELFKASASFPVGGPVYNAMVDALCKC 690
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 196
T +A L +M + ++ + L++ K G ++ II + D+ Y
Sbjct: 691 GKTAEAYNLFMEMADRGHSRDAVTISILVSHLTKHGKFQEAENIINGCFHGKVQLDTVVY 750
Query: 197 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 256
N +++++ + A + + M G + TF+ + S+Y + G +KA +
Sbjct: 751 NTFIKSMLESGKLYSAVSIHDRMISSG-IPQSLQTFNIMISVYGQGGKLDKATEMFTAAQ 809
Query: 257 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR--------LAFPNTANI-------- 300
D Y +++ YG+ G + ++ ++ ++F + N+
Sbjct: 810 ELGLRIDEKTYTNMLSFYGKAGRHQDASVLFTRMKEEGIMPGKISFNSMVNVYATSGLHD 869
Query: 301 -------------------SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 341
+YL +I+ + AE+ + + T N +I
Sbjct: 870 KAKFIFEEMQSSGQIPESLTYLALIKAYTEGRSYSKAEEAIQMMLTSNITLSCPHFNHLI 929
Query: 342 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRG 401
A+ KEG+++ A + G P+ YL G C + I +
Sbjct: 930 FAFLKEGKIDEARRICNEMEDLGVAPDLACCRTMMRVYLEYG-------CCSEGISLFKT 982
Query: 402 DGGKWVPSSETIRTFMRHFEQ 422
G P S + FE
Sbjct: 983 TCGSLKPDSFILSAAFHLFEH 1003
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 70/368 (19%), Positives = 150/368 (40%), Gaps = 12/368 (3%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+ Y LL Y + + AE +M E+ + ++ +L+ YA+ G +
Sbjct: 176 VAYTILLRLYGQVGKIKLAEETFLEMLEVGVEPDAVACGTLLCTYARRGQHTDMMLFYAA 235
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
++ ++P +N + +L + + G + R+ V + T++ + YV+
Sbjct: 236 VRRRGVVPPVSAFNFMVSSLQK-DKLHGKVIYLWNQMRETNVVPNQFTYTIVIGSYVKES 294
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
L E+A ++++ + + Y LI+L + G + ++ +R +N +
Sbjct: 295 LLEEAMNVWRKMKRSRFVPEEATYSGLISLSARHGRGEQALGLYEEMRAHGIVPSNYTCA 354
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+++ + +D A F E E D + +++ Y K G E+A+ E R
Sbjct: 355 SLLSLYYKTEDYSKALSLFAEMEQSRIVPDEVIYGILVRIYGKVGLYEDAQCTFEEIDRA 414
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQE 423
+ +T+ + ++ G+ A+ + +D+ R + PS + +R +
Sbjct: 415 DLLSDEQTYVAMAQVHMNAGNYDRAL----QVLDSMRLRNVE--PSLFSYSAVLRCHVAK 468
Query: 424 KDVDGAE-GFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEK-VEVSEA-S 480
+D+ AE F + K + D V L+R Y G+ LK+ K V++ E
Sbjct: 469 EDIAAAEDAFRALSKCGIPD--VFCCNDLLRLYVKLGQLEKASALILKLRKEVQLDEGLC 526
Query: 481 KKLLEAIC 488
++E C
Sbjct: 527 MTVMEVCC 534
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 69/355 (19%), Positives = 134/355 (37%), Gaps = 42/355 (11%)
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 187
+++ CK M A+ +L++M++ + + SL+ +YA+ +++QE S
Sbjct: 528 TVMEVCCKSGMIVDADKILKEMQKNRVAMKNSAMVSLIEMYAR-----NTTSVVQEEDNS 582
Query: 188 SIMPDSYT-YNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE 246
S D T + L + D G ++ R + G E
Sbjct: 583 SKTLDCRTDSSSLSTTLKLLLDTPGGSSAACQLIRK----------------FAREGNTE 626
Query: 247 KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI 306
+A+ ++L + SA LI YGQ L + ++++ +FP + Y M+
Sbjct: 627 EAKFLHEQLNELGVKPEDSATATLIVQYGQLQKLQQAEELFKA-SASFPVGGPV-YNAMV 684
Query: 307 QVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD 366
L A F E + D ++++ K G+ + AE +
Sbjct: 685 DALCKCGKTAEAYNLFMEMADRGHSRDAVTISILVSHLTKHGKFQEAENIINGCFHGKVQ 744
Query: 367 PNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSS-ETIRTFMRHFEQEKD 425
+ + F L +G + AV ++ I +G +P S +T + + Q
Sbjct: 745 LDTVVYNTFIKSMLESGKLYSAVSIHDRMISSG-------IPQSLQTFNIMISVYGQGGK 797
Query: 426 VDGAEGFLEILKKAVDDLGVEV----FEPLIRTYAAAGR--TSPVMLRRLKMEKV 474
+D A A +LG+ + + ++ Y AGR + V+ R+K E +
Sbjct: 798 LDKATEMF----TAAQELGLRIDEKTYTNMLSFYGKAGRHQDASVLFTRMKEEGI 848
>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 122/269 (45%), Gaps = 1/269 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ +T+ SLL K + E A +L +M + +N+L+ K G + I+
Sbjct: 182 DRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIM 241
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EM A +I+P+ TY+ + A + A + EMK G ++ D +++ L SIY +
Sbjct: 242 SEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLG-ISLDRVSYNTLLSIYAK 300
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G FE+A +E+EN +D+ Y L+ YG+ V +++ ++ + ++
Sbjct: 301 LGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLT 360
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I V A F+E++ D+ + + +I A K G +E+A L +
Sbjct: 361 YSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 420
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
+ G PN T+ D + R + VD
Sbjct: 421 KEGIRPNVVTYNSIIDAFGRPATTESVVD 449
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 3/211 (1%)
Query: 70 LYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYG 127
L+ A LS M RG+++ + LD V K +D A ++P + N +TY
Sbjct: 198 LWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYS 257
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 187
++++ Y K + A L +MK L + + +N+L+++YAK G E+ + +EM+ S
Sbjct: 258 TMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENS 317
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
I D TYN + +V EEMK V+ + T+S L +Y + GL+ +
Sbjct: 318 GIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKAR-HVSPNLLTYSTLIDVYSKGGLYRE 376
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTG 278
A +E + D+ Y LI + G
Sbjct: 377 AMDVFREFKKAGLKADVVLYSALIDALCKNG 407
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/266 (19%), Positives = 113/266 (42%), Gaps = 2/266 (0%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTG-HPEKIPAIIQEM 184
+ ++++ Y + +A + MK+ L + + +N+++ K G +++ I EM
Sbjct: 115 FSAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVIDACGKGGVEFKRVLEIFDEM 174
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ + PD T+N + + A + EM G + D T++ L + G
Sbjct: 175 LRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRG-IDQDIFTYNTLLDAVCKGGQ 233
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+ A + E+ +N ++ Y +I Y + G L + ++ ++ + +SY
Sbjct: 234 LDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNT 293
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
++ + L A +E E+ D+ N ++G Y K+ + + ++ E + R
Sbjct: 294 LLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARH 353
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVD 390
PN T+ D Y + G + A+D
Sbjct: 354 VSPNLLTYSTLIDVYSKGGLYREAMD 379
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 2/133 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP--ETSKNHLTYGSLLN 131
A+ + ME G+ K V L K D F ++ S N LTY +L++
Sbjct: 307 AMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLID 366
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
Y K + +A + + K+ L + +++L+ K G E +++ EM I P
Sbjct: 367 VYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 426
Query: 192 DSYTYNVWMRALA 204
+ TYN + A
Sbjct: 427 NVVTYNSIIDAFG 439
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 54/103 (52%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
K+ +TY +LL Y K+ + + E+MK ++ + + +++L+ +Y+K G + +
Sbjct: 321 KDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDV 380
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
+E K + + D Y+ + AL + A +++EM ++G
Sbjct: 381 FREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 423
>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
Length = 700
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 169/391 (43%), Gaps = 23/391 (5%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQG--IDAAENYFVDLPE--TSKNHLTYGSLLNCYCKE 136
M++ G + D A + LV+ V+ +D AEN F + S N+LTY S++ C+ +
Sbjct: 277 MKEMGYEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQMINNGVSCNNLTYTSMIQCFFLK 336
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 196
E A LL+ M + N + + +++ K E+ ++Q+M+ + P+ YTY
Sbjct: 337 EKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTY 396
Query: 197 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 256
N ++ L AV A ++ M++ G V + T++ L + ++A+ E
Sbjct: 397 NALIQGLCAVRRPEEALELVTLMEQGG-VPPNIYTYTILTHGLCKLRRLDRAKEMFNEAL 455
Query: 257 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 316
R + Y L+ Y + L E I + + +++Y +IQ LV LP
Sbjct: 456 ARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLP 515
Query: 317 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 376
A + E E+ + N++ A+ G ++A R + RG +A S
Sbjct: 516 DALRMHDEMENKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSA------S 569
Query: 377 DYYL------RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 430
DYYL G+M+ A L + I+ G + P+ T T ++ F ++ +D A+
Sbjct: 570 DYYLAIHCLSTAGEMEEAQALLYEMINKG------YSPNLTTYNTMIKGFCRQGRLDDAD 623
Query: 431 GFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 461
L + + + LI+ + GRT
Sbjct: 624 AMLNFMIENGIGPDTGSYNILIKEFHNQGRT 654
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 100/251 (39%), Gaps = 5/251 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N TY L + CK ++A+ + + L + + +N+L+ Y + + I+
Sbjct: 427 NIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDIL 486
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+EM + PD TY ++ L N + A R+ +EM+ G ++ T + LA
Sbjct: 487 KEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKG-YDVNFDTLNILARGLAR 545
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTAN 299
G + A + +++R S Y I G + E + + + PN
Sbjct: 546 VGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLT- 604
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+Y MI+ L A+ D N++I + +GR ++A++L
Sbjct: 605 -TYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILIKEFHNQGRTQDADQLYAT 663
Query: 360 ARRRGADPNAK 370
A RG N K
Sbjct: 664 ALERGVVLNPK 674
>gi|302820365|ref|XP_002991850.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
gi|300140388|gb|EFJ07112.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
Length = 425
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 137/304 (45%), Gaps = 3/304 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A++L + M K G+ + LD + K +D A F + + TY L+
Sbjct: 68 AMELLDKMIKTGLEPDTLLCNVVLDGLGKANMMDEACKLFASMKSMGCPADDYTYAILIR 127
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ E+A L ++M+E S+ + +++ +Y K G E ++++M ++ P
Sbjct: 128 SLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAP 187
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D YT N + A++ A + E MK+ G VA + +F+ + +AG A +
Sbjct: 188 DDYTLNSLITAVSRTGRTELACEIFERMKKSG-VAVNTVSFNAMLDCCGKAGKVGLAYQF 246
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
+ E+E R + + LI G+ SE Y++ + +R A +Y MI+
Sbjct: 247 MDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAK 306
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
++ A + F + E + ++ N++I A K GR ++A ++ +++G P+A T
Sbjct: 307 AGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAIT 366
Query: 372 WEIF 375
+
Sbjct: 367 ATVL 370
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 113/299 (37%), Gaps = 40/299 (13%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N TY ++ K A LL+KM + L ++ N ++ K ++ +
Sbjct: 48 NAYTYKCVIQSLVKAGNVVLAMELLDKMIKTGLEPDTLLCNVVLDGLGKANMMDEACKLF 107
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
MK+ D YTY + +R+L A + +EM+ G ++N+ IY +
Sbjct: 108 ASMKSMGCPADDYTYAILIRSLGRCKRDEEATLLFDEMEERG-CTPSAPAYTNVIDIYCK 166
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR---------- 291
AG E A LK++ ++N D LIT +TG I+ ++
Sbjct: 167 AGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVS 226
Query: 292 ---------------LAF------------PNTANISYLNMIQVLVNLKDLPGAEKCFKE 324
LA+ PN+ I++ +I L K A K +E
Sbjct: 227 FNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNS--ITFNTLINCLGRAKYASEAYKVLQE 284
Query: 325 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
S T D+ MI A+AK G + A E+ + G N T+ + D ++ G
Sbjct: 285 MRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAG 343
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/333 (19%), Positives = 132/333 (39%), Gaps = 7/333 (2%)
Query: 145 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 204
+L +++ + + N+++ Y ++ K+ QE+ P++YTY +++L
Sbjct: 1 MLAAIQDTPCRYHVLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLV 60
Query: 205 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 264
++ A ++++M + G + D + + +A + ++A + +++ D
Sbjct: 61 KAGNVVLAMELLDKMIKTG-LEPDTLLCNVVLDGLGKANMMDEACKLFASMKSMGCPADD 119
Query: 265 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 324
Y LI G+ E ++ + + +Y N+I + + A K+
Sbjct: 120 YTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKK 179
Query: 325 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 384
D N +I A ++ GR E A E+ ER ++ G N ++ D + G
Sbjct: 180 MLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGK 239
Query: 385 MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLG 444
+ LA + +D G K P+S T T + + K A L+ ++ A
Sbjct: 240 VGLAY----QFMDEMEARGIK--PNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPD 293
Query: 445 VEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVS 477
V + +I +A AG MEK S
Sbjct: 294 VFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCS 326
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 132/307 (42%), Gaps = 3/307 (0%)
Query: 79 ENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKE 136
+ M+ RG+ +TV + + + +D AE + E + + TYG+L+ C+
Sbjct: 264 DEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRV 323
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 196
E A + EKM + +++ F L+ + K G E + + +EM+ + PD+ TY
Sbjct: 324 GRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTY 383
Query: 197 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 256
N + L D+ A ++ EM+ G + D T++ L Y + + A + +
Sbjct: 384 NAIVNGLCRARDLKSASGIVVEMRSAG-LRPDTVTYTTLIDGYCKEEELDMAMEIKQNMV 442
Query: 257 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 316
D Y LI+ + G ++ R+ + A N +Y +I D+
Sbjct: 443 AEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVK 502
Query: 317 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 376
+ KE ++ + NV++ + K G+++NA+ L G P+ T+ I
Sbjct: 503 TGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILL 562
Query: 377 DYYLRNG 383
D + ++G
Sbjct: 563 DGHCKHG 569
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 100/278 (35%), Gaps = 36/278 (12%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
FN LM + G + EM++ + ++N + + D+ GAE + M
Sbjct: 243 FNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMS 302
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
G V D T+ L G E A +++ R + + LI + + G+
Sbjct: 303 EAG-VTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDA 361
Query: 281 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 340
+ + R +R ++Y ++ L +DL A E S D +
Sbjct: 362 ETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTL 421
Query: 341 IGAYAKEGRLENAEELKE----------------------RARRR-------------GA 365
I Y KE L+ A E+K+ +A R G
Sbjct: 422 IDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGL 481
Query: 366 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDG 403
+P+ T+ + D + R GD+K + L++ + GR G
Sbjct: 482 EPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPG 519
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 122/292 (41%), Gaps = 49/292 (16%)
Query: 174 PEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFS 233
PE +Q + A + P++ +NV MR L + +++ A+ V +EM+ G V +F+
Sbjct: 222 PEACAFYLQLLDAG-LPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRG-VRRTVVSFN 279
Query: 234 NLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 293
+ S AG + AE HR +S + G +VY
Sbjct: 280 TMISGMCRAGDLDGAE---------TLHRRMS----------EAGVTPDVY--------- 311
Query: 294 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
+Y +IQ L + + A F++ + V ++I A+ K+G E
Sbjct: 312 -------TYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETM 364
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETI 413
EL R RG P+A T+ + R D+K A + + G P + T
Sbjct: 365 LELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAG------LRPDTVTY 418
Query: 414 RTFMRHFEQEKDVDGAEGFLEILKKAV-DDLGVE--VFEPLIRTYAAAGRTS 462
T + + +E+++D A +EI + V + +G++ + LI + AGR++
Sbjct: 419 TTLIDGYCKEEELDMA---MEIKQNMVAEGVGLDEVTYTALISGLSKAGRSA 467
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 159/362 (43%), Gaps = 24/362 (6%)
Query: 106 IDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNS 163
+ A N F + ET+ N +T+ +L+N C+E +A ALL++M E L + + + +
Sbjct: 165 VSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224
Query: 164 LMTLYAKTGHPEKIPAIIQEM-KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRD 222
++ K G ++++M + S I+P+ Y+ + +L S A+ + EM+
Sbjct: 225 IVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284
Query: 223 GRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 282
G + D T++++ + +G + AE+ L+E+ R D+ Y LI + + G E
Sbjct: 285 G-IFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE 343
Query: 283 VYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 340
++ + R PNT I+Y +MI L AE F + + ++ N +
Sbjct: 344 AEELYDEMLPRGIIPNT--ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTL 401
Query: 341 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 400
I Y R+++ EL G + T+ + GD+ A+D L++ I +G
Sbjct: 402 IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG- 460
Query: 401 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDL-------GVEVFEPLIR 453
P T T + + A ++++K+ DL GV EP ++
Sbjct: 461 -----LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGV---EPDVQ 512
Query: 454 TY 455
TY
Sbjct: 513 TY 514
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 165/379 (43%), Gaps = 23/379 (6%)
Query: 77 LSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE-TSKNHLTYGSLLNCYCK 135
L E +E++ V+ A+ V + + +A E Y LP N +TY S+++ +CK
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372
Query: 136 ELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYT 195
+ + AE + M + + FN+L+ Y + ++ EM + ++ D+ T
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432
Query: 196 YNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG-------LFEKA 248
YN + V D++ A +++EM G + D T L + G +F+
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSG-LCPDIVTCDTLLDGLCDNGKLKDALEMFKVM 491
Query: 249 ERALKELENRNAHR----DLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISY 302
+++ K+L+ + D+ Y LI+ G E ++ + R P+T I+Y
Sbjct: 492 QKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT--ITY 549
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+MI L L A + F S + ++ +I Y K GR+++ EL R
Sbjct: 550 SSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGR 609
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ 422
RG NA T+ + + G++ A+D ++ I +G P + TIR +
Sbjct: 610 RGIVANAITYITLICGFRKVGNINGALDIFQEMISSG------VYPDTITIRNMLTGLWS 663
Query: 423 EKDVDGAEGFLEILKKAVD 441
++++ A LE L+ ++D
Sbjct: 664 KEELKRAVAMLEKLQMSMD 682
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 78/402 (19%), Positives = 153/402 (38%), Gaps = 21/402 (5%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK---NHLTYGSLL 130
A+ L + M + G+ T +D + K+ +A + + E S N + Y +++
Sbjct: 203 AVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAII 262
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
+ CK+ A+ L +M+E + +NS++ + +G ++QEM I
Sbjct: 263 DSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKIS 322
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
PD TYN + A AE + +EM G + + T+S++ + + + AE
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRG-IIPNTITYSSMIDGFCKQNRLDAAEH 381
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
+ + +L + LI Y + + + + +Y +I
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR-------- 362
+ DL A +E S DI + ++ G+L++A E+ + ++
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501
Query: 363 ---RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
G +P+ +T+ I + G A + E+ G VP + T + +
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG------IVPDTITYSSMIDG 555
Query: 420 FEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 461
++ +D A + + V F LI Y AGR
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 146/316 (46%), Gaps = 10/316 (3%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY S ++ CKE E+A L+ KM E L +++ +N+L+ Y G +K A EM
Sbjct: 288 TYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEM 347
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ IM TYN+++ AL + A+ +I+EM+ G + D T + L + Y G
Sbjct: 348 ISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKG-MMPDAVTHNILINGYCRCGD 406
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
++A L E+ + L Y LI + G+ + E ++ ++ I +
Sbjct: 407 AKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNA 466
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+I ++ A + KE ++ D N ++ Y +EG++E A +L + +RRG
Sbjct: 467 LIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRG 526
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 424
P+ ++ Y + GDMK A ++ + TG + P+ T ++ + +
Sbjct: 527 IKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTG------FDPTILTYNALIQGLCKNQ 580
Query: 425 DVDGAEGFLEILKKAV 440
+ + AE E+LK+ V
Sbjct: 581 EGEHAE---ELLKEMV 593
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 129/314 (41%), Gaps = 7/314 (2%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
T+ ++N CKE +KA+ + M+ L + + + +N+++ + G ++ I Q M
Sbjct: 218 TFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTM 277
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
K + PD YTYN ++ L + A +I +M +G + + T++ L Y G
Sbjct: 278 KDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKM-LEGGLVPNAVTYNALIDGYCNKGD 336
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+KA E+ ++ L Y I G + + + + +R +++
Sbjct: 337 LDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNI 396
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+I D A E + +I K R++ A+ L + ++ G
Sbjct: 397 LINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEG 456
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 424
P+ + D + NG++ A L++ D K +P T T M+ + +E
Sbjct: 457 LLPDIIVFNALIDGHCANGNIDRAFQLLKEM------DNMKVLPDEITYNTLMQGYCREG 510
Query: 425 DVDGAEGFLEILKK 438
V+ A L+ +K+
Sbjct: 511 KVEEARQLLDEMKR 524
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 103/210 (49%), Gaps = 1/210 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+T+ L+N YC+ ++A LL++M + + + + SL+ + K ++ A+ +
Sbjct: 392 VTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSK 451
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
++ ++PD +N + A +I A ++++EM + +V D T++ L Y G
Sbjct: 452 IQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMD-NMKVLPDEITYNTLMQGYCREG 510
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
E+A + L E++ R D +Y LI+ Y + G++ + +R+ + + ++Y
Sbjct: 511 KVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYN 570
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYD 333
+IQ L ++ AE+ KE S T D
Sbjct: 571 ALIQGLCKNQEGEHAEELLKEMVSKGITPD 600
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 135/330 (40%), Gaps = 18/330 (5%)
Query: 73 PALKLSENMEKR-GMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLN 131
P+ K S N+ +R ++ T +++ I +L +DA DL L+
Sbjct: 107 PSPKPSINLIQRLILSPTCTNRTIFDELALARDRVDAKTTLIFDL------------LVR 154
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
YC+ +A +KE + N +++L+ K + + EM +I
Sbjct: 155 AYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRS 214
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
YT+N+ + L + A+ I M+ G V + T++ + + G F++A
Sbjct: 215 SLYTFNIMINVLCKEGKLKKAKEFIGHMETLG-VKPNVVTYNTIIHGHCLRGKFQRARVI 273
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVY-RIWRSLRLAF-PNTANISYLNMIQVL 309
+ ++++ D Y I+ + G L E I + L PN ++Y +I
Sbjct: 274 FQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNA--VTYNALIDGY 331
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
N DL A E S + N+ I A EGR+ +A+ + + R +G P+A
Sbjct: 332 CNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDA 391
Query: 370 KTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
T I + Y R GD K A L++ + G
Sbjct: 392 VTHNILINGYCRCGDAKRAFGLLDEMVGKG 421
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 91/196 (46%), Gaps = 1/196 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY SL+ K ++A+AL K+++ L + FN+L+ + G+ ++ +++E
Sbjct: 427 VTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKE 486
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M ++PD TYN M+ + A ++++EMKR G + D +++ L S Y + G
Sbjct: 487 MDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRG-IKPDHISYNTLISGYSKRG 545
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
+ A R E+ + Y LI + + + + + +YL
Sbjct: 546 DMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYL 605
Query: 304 NMIQVLVNLKDLPGAE 319
++I+ + + DL G +
Sbjct: 606 SIIEAMETVDDLEGND 621
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 56/112 (50%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ +TY +L+ YC+E E+A LL++MK + + +N+L++ Y+K G + +
Sbjct: 495 DEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVR 554
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFS 233
EM + P TYN ++ L + AE +++EM G D T S
Sbjct: 555 DEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLS 606
Score = 38.1 bits (87), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 46/92 (50%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+H++Y +L++ Y K + A + ++M + + +N+L+ K E ++
Sbjct: 530 DHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELL 589
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAE 213
+EM + I PD TY + A+ V+D+ G +
Sbjct: 590 KEMVSKGITPDDSTYLSIIEAMETVDDLEGND 621
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 123/261 (47%), Gaps = 3/261 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+H+TY +L+N CK M KAE L+ +M++ + S FN+L+ Y G EK ++
Sbjct: 403 DHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVL 462
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYV 240
+M+ I D ++ ++A I A ++++M +D VA + ++++ Y+
Sbjct: 463 SDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKD--VAPNAQVYNSIIDAYI 520
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
E+G E+A +++++N + Y L+ ++ + E + +LR +
Sbjct: 521 ESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVV 580
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
SY +I N D A + +E +R + ++ A A GR+ + E L ++
Sbjct: 581 SYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQM 640
Query: 361 RRRGADPNAKTWEIFSDYYLR 381
+ +P++ + I D Y+R
Sbjct: 641 LHKNVEPSSSIYGIMVDAYVR 661
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 121/272 (44%), Gaps = 5/272 (1%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
T LLN CK+ KA+ + E + L +++ +N+L+ Y + I ++M
Sbjct: 336 TCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQM 395
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
K+ I PD TYN + L + ++ AE ++ EM++ G V TF+ L Y AG
Sbjct: 396 KSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSG-VDPSVETFNTLIDAYGTAGQ 454
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISY 302
EK L +++ + D+ ++ ++ + + G + E I + + PN Y
Sbjct: 455 LEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQ--VY 512
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
++I + D A ++ ++ + I N+++ + +++ AEEL R
Sbjct: 513 NSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRN 572
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
+G P+ ++ GD A++ L++
Sbjct: 573 QGLRPDVVSYNTIISACCNKGDTDKALELLQE 604
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 128/295 (43%), Gaps = 4/295 (1%)
Query: 104 QGIDAAENY--FVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPF 161
+G DA + + VD+ + N +TY ++++ + K E L ++M + + +
Sbjct: 209 KGSDALKVFDEMVDM-GVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTY 267
Query: 162 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 221
N L++ +TG ++ A++ EM + S++PD +TY++ L + + E +
Sbjct: 268 NVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLK 327
Query: 222 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 281
G + +T S L + + G KA++ + L + Y LI Y Q +L
Sbjct: 328 KGVMLGAYTC-SILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLR 386
Query: 282 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 341
+ I+ ++ +I+Y +I L L+ + AE E E + N +I
Sbjct: 387 GAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLI 446
Query: 342 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 396
AY G+LE + +++G + ++ + +NG + AV L+ I
Sbjct: 447 DAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMI 501
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/212 (19%), Positives = 99/212 (46%), Gaps = 3/212 (1%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELM 138
MEK G++ +V +D ++ D+ + + +++GS++ +CK
Sbjct: 430 MEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGK 489
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
+A A+L+ M ++ ++ +NS++ Y ++G E+ ++++MK S + TYN+
Sbjct: 490 IPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNL 549
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
++ L + I AE +I ++ G + D +++ + S G +KA L+E+
Sbjct: 550 LLKGLCRSSQIDEAEELIYTLRNQG-LRPDVVSYNTIISACCNKGDTDKALELLQEMNKY 608
Query: 259 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
L L++ G + ++ +++ +
Sbjct: 609 GIRPTLRTCHTLVSALASAGRVHDMECLYQQM 640
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 137/352 (38%), Gaps = 20/352 (5%)
Query: 145 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 204
+ ++M ++ + + + +N+++ + K G E + +M P+ TYNV + L
Sbjct: 216 VFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLC 275
Query: 205 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 264
+ +++EM + D T+S L G + E + L
Sbjct: 276 RTGRMDETRALMDEMASHSML-PDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVM--L 332
Query: 265 SAYQFLITLYG--QTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 322
AY I L G + G +++ +++ L + Y +I ++DL GA F
Sbjct: 333 GAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIF 392
Query: 323 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 382
++ +S D N +I K + AE+L + G DP+ +T+ D Y
Sbjct: 393 EQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTA 452
Query: 383 GDMKLAVDCLEKAIDTGRGDGGKWVPSSE-TIRTFMRHFEQEKDVDGAEGFLE--ILKKA 439
G LEK K + S + + ++ F + + A L+ I K
Sbjct: 453 GQ-------LEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDV 505
Query: 440 VDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEA---SKKLLEAIC 488
+ +V+ +I Y +G T +L KM+ VS + LL+ +C
Sbjct: 506 APN--AQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLC 555
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 53/270 (19%), Positives = 103/270 (38%), Gaps = 7/270 (2%)
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
PD+++YNV + L S A +V +EM G VA + T++ + +V+ G E R
Sbjct: 192 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMG-VAPNRITYNTMIDGHVKGGDLEAGFR 250
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
++ + ++ Y L++ +TG + E + + +Y + L
Sbjct: 251 LRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLT 310
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
+ F E ++++ K+G++ A+++ E G P
Sbjct: 311 RTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTV 370
Query: 371 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 430
+ + Y + D++ A E+ P T + + + V AE
Sbjct: 371 IYNTLINGYCQVRDLRGAFCIFEQM------KSRHIRPDHITYNALINGLCKLEMVTKAE 424
Query: 431 GFLEILKKAVDDLGVEVFEPLIRTYAAAGR 460
+ ++K+ D VE F LI Y AG+
Sbjct: 425 DLVMEMEKSGVDPSVETFNTLIDAYGTAGQ 454
>gi|110740599|dbj|BAE98404.1| hypothetical protein [Arabidopsis thaliana]
Length = 546
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 133/302 (44%), Gaps = 3/302 (0%)
Query: 100 VAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFS 157
V + + D A F ++ + + + TY +L+ + KE M + A + L+KM++ +
Sbjct: 33 VLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGD 92
Query: 158 SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIE 217
+ +++L+ L + K +I +K S I PD YN + A +I+
Sbjct: 93 LVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIK 152
Query: 218 EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQT 277
EM G V + ++S L S+YVE F +A E++ N DL+ +I +YGQ
Sbjct: 153 EMNEAG-VLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQL 211
Query: 278 GNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVT 337
+ E R++ SLR +SY +++V + A F+ + ++
Sbjct: 212 DMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 271
Query: 338 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
N MI Y K E A L + + RG +PNA T+ + + G + A +K
Sbjct: 272 NTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRS 331
Query: 398 TG 399
+G
Sbjct: 332 SG 333
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 127/264 (48%), Gaps = 22/264 (8%)
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
+ +N +TY +++ Y K + EKA L+++M+ + +++ ++++++++ K G ++
Sbjct: 263 DIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRA 322
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
+ Q++++S + D Y + A V + A+R++ E+K + + +
Sbjct: 323 ATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRE-----TAIT 377
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FP 295
I +AG E+A ++ +D+S + +I LY + V ++ +R A FP
Sbjct: 378 ILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFP 437
Query: 296 NTANISYLNMIQVLVNL----KDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRL 350
++ N+I +++N ++ A+ ++E E GC D V M+ Y+ +
Sbjct: 438 DS------NVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPD-EVHFQMLSLYSSKKDF 490
Query: 351 ENAEELKERARRRGADPNAKTWEI 374
E E L +R +DPN + E+
Sbjct: 491 EMVESLFQRLE---SDPNVNSKEL 511
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 130/306 (42%), Gaps = 15/306 (4%)
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+ EM+ ++ PD YTY+ + + A +++M++D RV+ D +SNL +
Sbjct: 44 GLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQD-RVSGDLVLYSNLIEL 102
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPN 296
+ KA L+ DL AY +I +YG+ E + + + A PN
Sbjct: 103 SRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPN 162
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
T +SY ++ V V A F E + D+ N+MI Y + ++ A+ L
Sbjct: 163 T--VSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRL 220
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSET-IRT 415
R+ +PN ++ Y G+ +L + + R D + V + T I+
Sbjct: 221 FWSLRKMDIEPNVVSYNTILRVY---GEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKI 277
Query: 416 FMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT--SPVMLRRLKMEK 473
+ + E EK + + E+ + ++ + + +I + AG+ + + ++L+
Sbjct: 278 YGKTMEHEKATNLVQ---EMQSRGIEPNAI-TYSTIISIWGKAGKLDRAATLFQKLRSSG 333
Query: 474 VEVSEA 479
VE+ +
Sbjct: 334 VEIDQV 339
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 55/131 (41%), Gaps = 1/131 (0%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
F ++ LY++ + + ++M+ + PDS + + A + A+ V EM+
Sbjct: 407 FGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQ 466
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
+G V D F L S+Y FE E + LE+ + + LY + L
Sbjct: 467 EEGCVFPDEVHFQML-SLYSSKKDFEMVESLFQRLESDPNVNSKELHLVVAALYERADKL 525
Query: 281 SEVYRIWRSLR 291
++ R+ +R
Sbjct: 526 NDASRVMNRMR 536
>gi|302822703|ref|XP_002993008.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
gi|300139208|gb|EFJ05954.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
Length = 431
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 135/304 (44%), Gaps = 3/304 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A+ + M K G+ + LD + K ID A F + + TY L+
Sbjct: 68 AMDFLDKMIKTGLEPDTLLYNVVLDGLGKANMIDEACKLFASMKSMGCPADDYTYAILIR 127
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ E+A L ++M+E S+ + +++ +Y K G E ++++M ++ P
Sbjct: 128 SLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAP 187
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D YT N + A++ A + E MK+ G VA + +F+ + +AG A +
Sbjct: 188 DDYTLNSLITAVSRTGRTELACEIFERMKKSG-VAVNTVSFNAMLDCCGKAGKVGLAYQF 246
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
+ E+E R + + LI G+ SE Y++ + +R A +Y MI+
Sbjct: 247 MDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAK 306
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
++ A + F + E + ++ N++I A K GR ++A ++ +++G P+A T
Sbjct: 307 AGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAIT 366
Query: 372 WEIF 375
+
Sbjct: 367 ATVL 370
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 113/299 (37%), Gaps = 40/299 (13%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N TY ++ K A L+KM + L ++ +N ++ K ++ +
Sbjct: 48 NAYTYKCVIQSLVKAGNVVLAMDFLDKMIKTGLEPDTLLYNVVLDGLGKANMIDEACKLF 107
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
MK+ D YTY + +R+L A + +EM+ G ++N+ IY +
Sbjct: 108 ASMKSMGCPADDYTYAILIRSLGRCKRDEEATLLFDEMEERG-CTPSAPAYTNVIDIYCK 166
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR---------- 291
AG E A LK++ ++N D LIT +TG I+ ++
Sbjct: 167 AGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVS 226
Query: 292 ---------------LAF------------PNTANISYLNMIQVLVNLKDLPGAEKCFKE 324
LA+ PN+ I++ +I L K A K +E
Sbjct: 227 FNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNS--ITFNTLINCLGRAKYASEAYKVLQE 284
Query: 325 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
S T D+ MI A+AK G + A E+ + G N T+ + D ++ G
Sbjct: 285 MRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAG 343
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/333 (19%), Positives = 132/333 (39%), Gaps = 7/333 (2%)
Query: 145 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 204
+L +++ + + N+++ Y ++ K+ QE+ P++YTY +++L
Sbjct: 1 MLAAIQDTPCRYHVLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLV 60
Query: 205 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 264
++ A +++M + G + D ++ + +A + ++A + +++ D
Sbjct: 61 KAGNVVLAMDFLDKMIKTG-LEPDTLLYNVVLDGLGKANMIDEACKLFASMKSMGCPADD 119
Query: 265 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 324
Y LI G+ E ++ + + +Y N+I + + A K+
Sbjct: 120 YTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKK 179
Query: 325 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 384
D N +I A ++ GR E A E+ ER ++ G N ++ D + G
Sbjct: 180 MLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGK 239
Query: 385 MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLG 444
+ LA + +D G K P+S T T + + K A L+ ++ A
Sbjct: 240 VGLAY----QFMDEMEARGIK--PNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPD 293
Query: 445 VEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVS 477
V + +I +A AG MEK S
Sbjct: 294 VFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCS 326
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 120/256 (46%), Gaps = 5/256 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N TYG+L+N +CK E AE LL M+ +G + + FN+++ Y + G EK I
Sbjct: 287 NERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIK 346
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M+ I D YTYN L VN + A++++ M G VA ++ +++ L SI+ +
Sbjct: 347 AVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKG-VAPNYVSYTTLISIHAK 405
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTAN 299
G +A R +++E + + + Y +I Y + G++ E R + + + P+
Sbjct: 406 EGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDI-- 463
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+Y ++ + A + F+E + ++ ++ AKEGR E A +L +
Sbjct: 464 YTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDD 523
Query: 360 ARRRGADPNAKTWEIF 375
G P+ + +
Sbjct: 524 MLAAGLTPDDTLYSVL 539
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 110/266 (41%), Gaps = 1/266 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S L+ +++ +CK + A LL+++ +G ++ +NSL+ Y + + + +
Sbjct: 145 SVTPLSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAG 204
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+++EM+ + P TY + + L+ DIS E V +EMKR VA D +S + + Y
Sbjct: 205 LLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRK-NVAGDVYFYSAVINAY 263
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
G +A E + Y LI + + G + + ++L
Sbjct: 264 CRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQ 323
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
I + MI + A + E DI N + + R+E+A++L
Sbjct: 324 IVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHI 383
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDM 385
+G PN ++ + + GDM
Sbjct: 384 MAEKGVAPNYVSYTTLISIHAKEGDM 409
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/340 (20%), Positives = 131/340 (38%), Gaps = 42/340 (12%)
Query: 94 AIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKE--------LMTE--- 140
++ +D K +D A +LP N Y SLL+ Y ++ L+ E
Sbjct: 152 SVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMEN 211
Query: 141 ------------------------KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK 176
K EA+ ++MK N+ +++++ Y + G+ +
Sbjct: 212 RGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRR 271
Query: 177 IPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLA 236
+ E + P+ TY + + I AE ++ +M+ G V + F+ +
Sbjct: 272 ASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRG-VGHNQIVFNTMI 330
Query: 237 SIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAF 294
Y G+ EKA +E D+ Y L + + + ++ + +
Sbjct: 331 DGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVA 390
Query: 295 PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAE 354
PN +SY +I + D+ A + F++ E + + NVMI Y K G + AE
Sbjct: 391 PNY--VSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAE 448
Query: 355 ELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
K+ ++G P+ T+ + NG + +A+ E+
Sbjct: 449 RFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEE 488
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 62/132 (46%), Gaps = 2/132 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
A +L +ME +G +V + +D K I AE + ++ + + TY L++
Sbjct: 412 ARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVH 471
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C + A L E+MK + + + +L++ AK G E+ + +M A+ + P
Sbjct: 472 GHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTP 531
Query: 192 DSYTYNVWMRAL 203
D Y+V + +L
Sbjct: 532 DDTLYSVLVGSL 543
>gi|12324355|gb|AAG52147.1|AC022355_8 hypothetical protein; 57683-56685 [Arabidopsis thaliana]
Length = 332
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 133/321 (41%), Gaps = 46/321 (14%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+ H YG+++N CK TE A LL KM+E ++ + +N+++ K GH +
Sbjct: 39 EGHQPYGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNL 98
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
EM I PD TY SG +I+ R GR WT
Sbjct: 99 FTEMHDKGIFPDVITY-------------SG---MIDSFCRSGR----WT---------- 128
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTA 298
AE+ L+++ R + D+ + LI + G +SE I+ + R FP T
Sbjct: 129 ------DAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTT- 181
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
I+Y +MI L A++ S + D+ + +I Y K R++N E+
Sbjct: 182 -ITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFC 240
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 418
RRG N T+ + + GD+ A D L I +G P+ T ++ +
Sbjct: 241 EMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSG------VAPNYITFQSMLA 294
Query: 419 HFEQEKDVDGAEGFLEILKKA 439
+K++ A LE L+K+
Sbjct: 295 SLCSKKELRKAFAILEDLQKS 315
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 149/342 (43%), Gaps = 10/342 (2%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
S N +T+ L+ CK +A L + E ++ FN L+ K G+P++
Sbjct: 58 CSPNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAV 117
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLAS 237
+ + M++S + P+ TYN + L ++ A ++EEM ++ G+ A D T++ L +
Sbjct: 118 KLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLIN 177
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
+ A +A ++++ + D+ L++ + G++ E I ++LA P
Sbjct: 178 AFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVP 237
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
I+Y ++I L + A + K + D+ N ++ + K G L A E+
Sbjct: 238 DVITYNSIIHALCVAGKVVEAAEILKTMS---CSPDLVTFNTLLDGFCKAGMLPRALEVL 294
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 417
E R P+ T+ I + R G +++A LE+ + G ++P + +
Sbjct: 295 EEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQG------YIPDVIAYTSLV 348
Query: 418 RHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
+ +++ A ++ + GV ++ L+ Y AG
Sbjct: 349 DGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAG 390
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 126/300 (42%), Gaps = 6/300 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
A E M+ G+N V I + + K ++ A + L + +TY S+++
Sbjct: 188 ACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIH 247
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C + K E +K ++ + FN+L+ + K G + +++EM +I+P
Sbjct: 248 ALC---VAGKVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILP 304
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D TY + + L V + A ++EE+ R G + D +++L ++G E+A +
Sbjct: 305 DVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIP-DVIAYTSLVDGLCKSGEIEEAHKL 363
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
+KE+ R + Y L++ Y + GN+ + I + +Y ++ L+
Sbjct: 364 VKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIK 423
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+ A + + D+ N +I K R+ A +L + RG PN T
Sbjct: 424 DGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVT 483
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 72/168 (42%), Gaps = 1/168 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+ Y SL++ YC+ KA +L +M +N+ +N ++ K G K ++I +
Sbjct: 377 VMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISD 436
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
+ A +PD TYN + L N + A + +EM G D T S + + G
Sbjct: 437 LVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGL-CRVG 495
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 291
+ A + E+ + ++ Y LI ++ + + + ++R
Sbjct: 496 RVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMR 543
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 132/313 (42%), Gaps = 11/313 (3%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TYG +++ YC E A LL +M L + + + S++ L G ++++
Sbjct: 286 VTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVED 345
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M ++ D+ + M D++ A +EM++ G +AAD T++ L + AG
Sbjct: 346 MVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRG-LAADGVTYTALINGLCRAG 404
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANIS 301
++AER L+E+E++ D Y LI Y + G ++E + + + + PN ++
Sbjct: 405 ELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNV--VT 462
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y + L D+ A + E S +I N +I K G LE A
Sbjct: 463 YTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMD 522
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
G P+ T+ ++ ++ A L++ +D G P+ T M F
Sbjct: 523 EAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKG------IKPTIVTYNVLMNGFC 576
Query: 422 QEKDVDGAEGFLE 434
V+G + LE
Sbjct: 577 MSGRVEGGKRLLE 589
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 99/220 (45%), Gaps = 5/220 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAA---ENYFVDLPETSKNHLTYGSLL 130
A ++ + ME +G++ + +D KV + A N V + N +TY +L
Sbjct: 409 AERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQ-KRVTPNVVTYTALS 467
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
+ CK+ A LL +M L + +NSL+ K G+ E+ + +M + +
Sbjct: 468 DGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLK 527
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
PD YTY + AL ++ A +++EM G + T++ L + + +G E +R
Sbjct: 528 PDVYTYTTIIGALCQSKELDRAHSLLQEMLDKG-IKPTIVTYNVLMNGFCMSGRVEGGKR 586
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
L+ + +N H + + Y L+ Y N+ I++ +
Sbjct: 587 LLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGM 626
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 132/318 (41%), Gaps = 44/318 (13%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVA---KVQGIDAAENYFVDLPE--TSKNHLTYGS 128
A+++ E+M G+ V D A+ +++ + + AA N+F ++ + + + +TY +
Sbjct: 339 AVRVVEDMVMHGV---VLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTA 395
Query: 129 LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS 188
L+N C+ ++AE +L++M++ L ++ + L+ Y K G + + +M
Sbjct: 396 LINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKR 455
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
+ P+ TY L D+ A ++ EM G + + T+++L + +AG E+A
Sbjct: 456 VTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG-LELNIFTYNSLINGLCKAGNLEQA 514
Query: 249 ERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQV 308
R + +++ + G +VY +Y +I
Sbjct: 515 MRTMIDMD-------------------EAGLKPDVY----------------TYTTIIGA 539
Query: 309 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 368
L K+L A +E I NV++ + GR+E + L E + PN
Sbjct: 540 LCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPN 599
Query: 369 AKTWEIFSDYYLRNGDMK 386
T+ Y +MK
Sbjct: 600 TTTYNSLMKQYCIEKNMK 617
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/330 (20%), Positives = 117/330 (35%), Gaps = 18/330 (5%)
Query: 152 LNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSI------MPDSYT--YNVWMRAL 203
L L S P + Y + PE A++ + +P+ T YN+ ++AL
Sbjct: 204 LLLCLPSAPLLLRLRQYGISPSPESCNAVLCRLPLDEAVQLFQELPEKNTCSYNILLKAL 263
Query: 204 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 263
I A ++ +EM D T+ + Y E A + L E+ R +
Sbjct: 264 CTAGRIKDAHQLFDEMAS----PPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELN 319
Query: 264 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 323
AY +I L G +S+ R+ + + + ++ DL A F
Sbjct: 320 PVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFD 379
Query: 324 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
E + D +I + G L+ AE + + +G D +A T+ + D Y + G
Sbjct: 380 EMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVG 439
Query: 384 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDL 443
M A K + + P+ T ++ DV A L + +L
Sbjct: 440 KMTEAFLVHNKMVQK------RVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLEL 493
Query: 444 GVEVFEPLIRTYAAAGRTSPVMLRRLKMEK 473
+ + LI AG M + M++
Sbjct: 494 NIFTYNSLINGLCKAGNLEQAMRTMIDMDE 523
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 3/158 (1%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY L+N +C E + LLE M E N+ ++ +NSLM Y + + I +
Sbjct: 566 VTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKG 625
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG-RVAADWTTFSNLASIYVEA 242
M + ++P+ TYN+ ++ ++ A EM G R+ A ++++ L + +
Sbjct: 626 MLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTA--SSYNALIRLLNKK 683
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
F +A R +++ + Y F I L NL
Sbjct: 684 KKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNL 721
>gi|357502615|ref|XP_003621596.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496611|gb|AES77814.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 130/278 (46%), Gaps = 5/278 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ LTY SLL+ + M E A+ LL +M + + + +N+ + K G + ++
Sbjct: 283 DRLTYNSLLSVCASKGMWETAQKLLSEMDQKGIVRDAFTYNTYLDTLCKGGQIDLARRVL 342
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+EM + + P TY+ + A N + A + EEMK ++ D +++ + IY +
Sbjct: 343 EEMSSRRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMKLRS-ISVDRVSYNTMVGIYAK 401
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTAN 299
G F++A KE+E+ RD+ Y L++ YG+ G EV R++ ++ +PNT
Sbjct: 402 LGRFDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYGMYDEVRRLFEEMKAWNIYPNT-- 459
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
++Y MI V A +K+++ D+ +I + K G +E++ L
Sbjct: 460 LTYSTMIDVYTKGGMFQEAMDVYKDFKKAQLEVDVVFYTSIIDSLCKNGLVESSIMLLIA 519
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
+G PN T+ D ++ ++ V +A++
Sbjct: 520 MIEKGIKPNVVTFNSIIDASRQSPTLEYGVHGSSQAVE 557
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 111/267 (41%), Gaps = 2/267 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQE 183
++ ++++ Y + A L M+ + + + +NSL+ AK + + E
Sbjct: 215 SFSAMISAYGRNGHFSDAVDLFRSMRSWGVYPNLISYNSLIDAGAKGEVDFDVVVKFFDE 274
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M A I+PD TYN + A+ A++++ EM + G + D T++ + G
Sbjct: 275 MLAEGIVPDRLTYNSLLSVCASKGMWETAQKLLSEMDQKG-IVRDAFTYNTYLDTLCKGG 333
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
+ A R L+E+ +R + Y +I + L + ++ ++L + +SY
Sbjct: 334 QIDLARRVLEEMSSRRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMKLRSISVDRVSYN 393
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
M+ + L A KE ES D+ N ++ Y + G + L E +
Sbjct: 394 TMVGIYAKLGRFDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYGMYDEVRRLFEEMKAW 453
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVD 390
PN T+ D Y + G + A+D
Sbjct: 454 NIYPNTLTYSTMIDVYTKGGMFQEAMD 480
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 85/177 (48%), Gaps = 3/177 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
A ++ E M R + TV + +D AK ++ A N + + L S + ++Y +++
Sbjct: 338 ARRVLEEMSSRRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMKLRSISVDRVSYNTMVG 397
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
Y K ++A ++M+ + + +N+L++ Y + G +++ + +EMKA +I P
Sbjct: 398 IYAKLGRFDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYGMYDEVRRLFEEMKAWNIYP 457
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
++ TY+ + A V ++ K+ ++ D ++++ + GL E +
Sbjct: 458 NTLTYSTMIDVYTKGGMFQEAMDVYKDFKK-AQLEVDVVFYTSIIDSLCKNGLVESS 513
>gi|42562903|ref|NP_176512.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|114050643|gb|ABI49471.1| At1g63230 [Arabidopsis thaliana]
gi|332195952|gb|AEE34073.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 323
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 133/321 (41%), Gaps = 46/321 (14%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+ H YG+++N CK TE A LL KM+E ++ + +N+++ K GH +
Sbjct: 39 EGHQPYGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNL 98
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
EM I PD TY SG +I+ R GR WT
Sbjct: 99 FTEMHDKGIFPDVITY-------------SG---MIDSFCRSGR----WT---------- 128
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTA 298
AE+ L+++ R + D+ + LI + G +SE I+ + R FP T
Sbjct: 129 ------DAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTT- 181
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
I+Y +MI L A++ S + D+ + +I Y K R++N E+
Sbjct: 182 -ITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFC 240
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 418
RRG N T+ + + GD+ A D L I +G P+ T ++ +
Sbjct: 241 EMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSG------VAPNYITFQSMLA 294
Query: 419 HFEQEKDVDGAEGFLEILKKA 439
+K++ A LE L+K+
Sbjct: 295 SLCSKKELRKAFAILEDLQKS 315
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 123/261 (47%), Gaps = 3/261 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+H+TY +L+N CK M KAE L+ +M++ + S FN+L+ Y G EK ++
Sbjct: 225 DHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVL 284
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYV 240
+M+ I D ++ ++A I A ++++M +D VA + ++++ Y+
Sbjct: 285 SDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKD--VAPNAQVYNSIIDAYI 342
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
E+G E+A +++++N + Y L+ ++ + E + +LR +
Sbjct: 343 ESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVV 402
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
SY +I N D A + +E +R + ++ A A GR+ + E L ++
Sbjct: 403 SYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQM 462
Query: 361 RRRGADPNAKTWEIFSDYYLR 381
+ +P++ + I D Y+R
Sbjct: 463 LHKNVEPSSSIYGIMVDAYVR 483
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 122/272 (44%), Gaps = 5/272 (1%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
T LLN CK+ KAE +LE + L +++ +N+L+ Y + I ++M
Sbjct: 158 TCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQM 217
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
K+ I PD TYN + L + ++ AE ++ EM++ G V TF+ L Y AG
Sbjct: 218 KSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSG-VDPSVETFNTLIDAYGTAGQ 276
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISY 302
EK L +++ + D+ ++ ++ + + G + E I + + PN Y
Sbjct: 277 LEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQ--VY 334
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
++I + D A ++ ++ + I N+++ + +++ AEEL R
Sbjct: 335 NSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRN 394
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
+G P+ ++ GD A++ L++
Sbjct: 395 QGLRPDVVSYNTIISACCNKGDTDKALELLQE 426
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 116/275 (42%), Gaps = 1/275 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY ++++ + K E L ++M + + +N L++ + G ++ ++
Sbjct: 50 NWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLM 109
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EM + S+ PD +TY++ L + + E + G + +T S L + +
Sbjct: 110 DEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTC-SILLNGLCK 168
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G KAE+ L+ L + Y LI Y Q +L + I+ ++ +I+
Sbjct: 169 DGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHIT 228
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I L L+ + AE E E + N +I AY G+LE + +
Sbjct: 229 YNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQ 288
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 396
++G + ++ + +NG + AV L+ I
Sbjct: 289 QKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMI 323
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 100/212 (47%), Gaps = 3/212 (1%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELM 138
MEK G++ +V +D ++ D+ + + +++GS++ +CK
Sbjct: 252 MEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGK 311
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
+A A+L+ M ++ ++ +NS++ Y ++G E+ ++++MK S + TYN+
Sbjct: 312 IPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNL 371
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
++ L + I AE +I ++ G + D +++ + S G +KA L+E+
Sbjct: 372 LLKGLCRSSQIDEAEELIYTLRNQG-LRPDVVSYNTIISACCNKGDTDKALELLQEMNKY 430
Query: 259 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
L Y L++ G + ++ +++ +
Sbjct: 431 GIRPTLRTYHTLVSALASAGRVHDMECLYQQM 462
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 105/272 (38%), Gaps = 11/272 (4%)
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
PD+++YNV + L S A +V +EM G V +W T++ + +V+ G E R
Sbjct: 14 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMG-VVPNWITYNTMIDGHVKGGDLEAGFR 72
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQV 308
++ + ++ Y L++ + G + E + + FP+ +Y +
Sbjct: 73 LRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPD--GFTYSILFDG 130
Query: 309 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 368
L + F E ++++ K+G++ AE++ E G P
Sbjct: 131 LTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPT 190
Query: 369 AKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDG 428
+ + Y + D++ A E+ P T + + + V
Sbjct: 191 TVIYNTLINGYCQVRDLRGAFCIFEQM------KSRHIRPDHITYNALINGLCKLEMVTK 244
Query: 429 AEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 460
AE + ++K+ D VE F LI Y AG+
Sbjct: 245 AEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQ 276
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 150/332 (45%), Gaps = 11/332 (3%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY ++NC CK ++A + +MKE + + +L++ K + I E+
Sbjct: 635 TYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNEL 694
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ SS++PD++ YN+ + L N + A ++++ MK + D T+++L ++G
Sbjct: 695 QESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQ-NILPDLFTYTSLLDGLGKSGR 753
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISY 302
E+A ++ D+ AY L+ + G+ G LS I+R++ + P+ ++Y
Sbjct: 754 LEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDV--VTY 811
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
++I L + A F+ S T ++ V + +I ++ K+G ++ A EL E +R
Sbjct: 812 SSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQR 871
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ 422
R PN T+ + G + +A LE+ G VP T + +
Sbjct: 872 RQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVG------CVPDLVTYNILIDGVGK 925
Query: 423 EKDVDGAEGFLEILKKAVDDLGVEVFEPLIRT 454
VD AE + + +K+ V F LI +
Sbjct: 926 MGMVDEAESYFKRMKEKGIVPDVITFTSLIES 957
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 128/303 (42%), Gaps = 7/303 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
AL + M++ GM + + L + K + ID A F +L E+S + Y ++N
Sbjct: 652 ALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVN 711
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
K ++A L++ MK N+ + SL+ K+G E+ + +M P
Sbjct: 712 GLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEP 771
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D Y M L +S A + M + R D T+S+L + G E+A
Sbjct: 772 DVVAYTSLMDVLGKGGKLSHALIIFRAMAKK-RCVPDVVTYSSLIDSLGKEGRVEEAYYF 830
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVL 309
+ ++ ++ Y LI +G+ G + ++ + R PN ++Y N++ L
Sbjct: 831 FENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNI--VTYNNLLSGL 888
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
L AEK +E E D+ N++I K G ++ AE +R + +G P+
Sbjct: 889 AKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDV 948
Query: 370 KTW 372
T+
Sbjct: 949 ITF 951
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 88/421 (20%), Positives = 160/421 (38%), Gaps = 32/421 (7%)
Query: 82 EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL----PETSKNHLTYGSLLNCYCKEL 137
++ G + TV + + +A Q DA + S + LT SLL +
Sbjct: 174 QQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLT--SLLRTFGSTN 231
Query: 138 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 197
A + +MK S+ +N ++ L K G + ++ I PD+ T+
Sbjct: 232 NVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFR 291
Query: 198 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 257
+++ + + A I+EM + G + TF+ L V++G ++A + ++N
Sbjct: 292 IFVHSFNRSGRLDPAAEPIQEMIKSG-IDPGVHTFTVLIDALVKSGNIDEACKFFNGMKN 350
Query: 258 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 317
++ Y L+ + G L E ++ ++ + I+Y +I L +
Sbjct: 351 LRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADM 410
Query: 318 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 377
A FKE + ++R N+MI K GR A +L + +GA P+ T+ D
Sbjct: 411 ACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLID 470
Query: 378 YYLRNGDMKLAVDCLEKAI----------DTGRGDGGKWVPSSETI-------------- 413
+ G M + +++ + D+ G G + T+
Sbjct: 471 VLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEIT 530
Query: 414 -RTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKME 472
T M F VD A LE++KK V + L+ AGR + +ME
Sbjct: 531 YNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREME 590
Query: 473 K 473
K
Sbjct: 591 K 591
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/321 (20%), Positives = 131/321 (40%), Gaps = 40/321 (12%)
Query: 114 VDLPETSKNH------LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTL 167
V L E K H +TY +L++ K ++A +LL +M++ S + ++SLM
Sbjct: 548 VKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMAS 607
Query: 168 YAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG---- 223
+ K E+ ++ EM + D TY++ + L +D+ A V MK +G
Sbjct: 608 FYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPL 667
Query: 224 ------------------------------RVAADWTTFSNLASIYVEAGLFEKAERALK 253
+ D ++ + + V++ ++A + +
Sbjct: 668 LGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVD 727
Query: 254 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLK 313
++N+N DL Y L+ G++G L E + ++ + ++Y +++ VL
Sbjct: 728 SMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGG 787
Query: 314 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 373
L A F+ D+ + +I + KEGR+E A E + +G PN +
Sbjct: 788 KLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYS 847
Query: 374 IFSDYYLRNGDMKLAVDCLEK 394
D + + G + A++ E+
Sbjct: 848 SLIDSFGKKGMVDRALELFEE 868
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 86/190 (45%), Gaps = 3/190 (1%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
+ N Y SL++ + K+ M ++A L E+M+ + + +N+L++ AK G
Sbjct: 839 CTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAE 898
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+++EM+ +PD TYN+ + + + + AE + MK G + D TF++L
Sbjct: 899 KLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKG-IVPDVITFTSLIES 957
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPN 296
+ +A +E + + Y LI + G+ G + E I+ +++ P+
Sbjct: 958 LGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPD 1017
Query: 297 TANISYLNMI 306
I + I
Sbjct: 1018 GITIGIMKRI 1027
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/361 (20%), Positives = 147/361 (40%), Gaps = 12/361 (3%)
Query: 101 AKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMP 160
++G D Y L S +TY +L++ + ++A LLE MK+ + +
Sbjct: 507 GTIEGADRTVEY-PSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVT 565
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
+ +L+ K G ++ ++++EM+ P TY+ M + + + + +EM
Sbjct: 566 YTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMV 625
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
R G V AD +T+S + + ++ ++A ++ L Y+ L++ + +
Sbjct: 626 RKGCV-ADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKI 684
Query: 281 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 340
+I+ L+ + Y M+ LV + A K ++ D+ +
Sbjct: 685 DFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSL 744
Query: 341 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 400
+ K GRLE A + + G +P+ + D + G + A+ + +A+ R
Sbjct: 745 LDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHAL-IIFRAMAKKR 803
Query: 401 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE--ILKKAVDDLGVEVFEPLIRTYAAA 458
VP T + + +E V+ A F E I K ++G V+ LI ++
Sbjct: 804 -----CVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVG--VYSSLIDSFGKK 856
Query: 459 G 459
G
Sbjct: 857 G 857
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 61/134 (45%), Gaps = 2/134 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
A KL E MEK G + I +D V K+ +D AE+YF + E + +T+ SL+
Sbjct: 897 AEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIE 956
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
K +A L + M+E S + +N L+ + + G + I EMK MP
Sbjct: 957 SLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMP 1016
Query: 192 DSYTYNVWMRALAA 205
D T + R L+
Sbjct: 1017 DGITIGIMKRILSV 1030
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 81/187 (43%), Gaps = 3/187 (1%)
Query: 79 ENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP--ETSKNHLTYGSLLNCYCKE 136
EN +G V + +D K +D A F ++ + N +TY +LL+ K
Sbjct: 832 ENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKA 891
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 196
AE LLE+M+++ + +N L+ K G ++ + + MK I+PD T+
Sbjct: 892 GRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITF 951
Query: 197 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 256
+ +L V+ + A + + M+ +G T++ L I AG +A E++
Sbjct: 952 TSLIESLGKVDKLLEACELFDSMEEEG-YNPSVVTYNVLIDILGRAGKVHEAAMIFHEMK 1010
Query: 257 NRNAHRD 263
+ D
Sbjct: 1011 VKGCMPD 1017
>gi|414876286|tpg|DAA53417.1| TPA: hypothetical protein ZEAMMB73_373649 [Zea mays]
Length = 561
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 140/308 (45%), Gaps = 11/308 (3%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY L++ CK M E A + ++M+E + + P+NSL+ Y K + + ++
Sbjct: 85 NEVTYAILIHSLCKRGMMEDALCMFDRMREKGIRMTVYPYNSLINGYCKHNNFHQARGLL 144
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EM A + P +Y+ + L D++ A + EM R+ V+ + TF+ L S + +
Sbjct: 145 NEMVAKGLTPSPASYSPLIAGLCRKGDLASAMELHREMTRNA-VSGNVYTFTALISGFCK 203
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G ++A R ++ + + + +I Y + GN+ + ++++ + N +
Sbjct: 204 DGNMDEATRLFHKMMESSLVPNEVTFNVMIEGYCRVGNIRKAFQLYDQMLDRGLTPDNYT 263
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y ++I V+ A++ + E+ CA + ++ + KEG +AE L +
Sbjct: 264 YRSLISVVCLTLGAMKAKEFVADLENNCAVLNSFSLTALMHGFCKEG---SAEILCKEML 320
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
PN+ T+ F DY G+++ A K + +G + ++ T T ++ F
Sbjct: 321 AGHFLPNSYTYNCFLDYLANEGELEKA-----KVLHAAMLEG--CLANTVTFNTLIKGFC 373
Query: 422 QEKDVDGA 429
+ GA
Sbjct: 374 MAGQIQGA 381
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 53/272 (19%), Positives = 106/272 (38%), Gaps = 40/272 (14%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
S N T+ +L++ +CK+ ++A L KM E +L + + FN ++ Y + G+ K
Sbjct: 187 VSGNVYTFTALISGFCKDGNMDEATRLFHKMMESSLVPNEVTFNVMIEGYCRVGNIRKAF 246
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+ +M + PD+YTY + + A+ + +++ + V + + + L
Sbjct: 247 QLYDQMLDRGLTPDNYTYRSLISVVCLTLGAMKAKEFVADLENNCAVLNSF-SLTALMHG 305
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
+ + G AE KE + A FL PN+
Sbjct: 306 FCKEG---SAEILCKE---------MLAGHFL------------------------PNS- 328
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+Y + L N +L A+ GC + N +I + G+++ A +L +
Sbjct: 329 -YTYNCFLDYLANEGELEKAKVLHAAMLEGCLANTVTF-NTLIKGFCMAGQIQGAIDLMQ 386
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
+ G P+ ++ + + GD A +
Sbjct: 387 KNTESGFFPDCISYSTIINELCKVGDTNKAFE 418
>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
Length = 748
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 147/347 (42%), Gaps = 24/347 (6%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY L++CY + E A A+ ++ LG +N+L+ ++K G +K + +M
Sbjct: 124 TYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKM 183
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
S+ PD TYN + L ++ +ERV+E+M D + + T+++L Y AG+
Sbjct: 184 IEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMV-DAGIRPNNKTYNSLIYGYSTAGM 242
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
++++ R KE+ + + I + + E I+ S+ L P ISY
Sbjct: 243 WKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYST 302
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGC-------ATYDIRVTNVMIGAYAKEGRLENAEELK 357
++ AE CF S + R N++I AYA+ G ++ A +
Sbjct: 303 LLHGY-------AAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIF 355
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETI-RTF 416
E + +G P+ T+ R G + A+ +D G VP SE + R
Sbjct: 356 EDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIG-------VPPSEAVYRCL 408
Query: 417 MRHFEQEKD-VDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTS 462
++ + V E E++ K + GV+ F +I GR +
Sbjct: 409 IQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVA 455
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/404 (20%), Positives = 166/404 (41%), Gaps = 24/404 (5%)
Query: 68 RKLYYPALKLS--ENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNH 123
R+++ P L L+ + + G+ V +D +K +D A F + E S +
Sbjct: 133 RRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDV 192
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY SL++ CK K+E +LE+M + + ++ +NSL+ Y+ G ++ + +E
Sbjct: 193 VTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKE 252
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M +S ++P N ++ AL N I A+ + + M G + ++S L Y G
Sbjct: 253 MSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGP-KPNIISYSTLLHGYAAEG 311
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANIS 301
F + + ++ + + LI Y + G + + I+ + + P+T ++
Sbjct: 312 CFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDT--VT 369
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL-KERA 360
+ +I L + L A F V +I G L A+EL E
Sbjct: 370 FATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMM 429
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 420
+ P K + + + G + D ++ + TG+ P+ T + M +
Sbjct: 430 NKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQR------PNVVTFNSLMEGY 483
Query: 421 EQEKDVDGAEGFLEILKKAVDDLGVE----VFEPLIRTYAAAGR 460
+++ A L+ A+ +G+E ++ L+ Y GR
Sbjct: 484 CLVGNMEEAFALLD----AMASIGIEPNCYIYGTLVDGYCKNGR 523
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 97/211 (45%), Gaps = 3/211 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL + +M +G+ T I L + + + AA+ F ++ E T+ + TYG +L
Sbjct: 527 ALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLG 586
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C+ T++A LLEK+ +N+ F + FN +++ K G ++ + + ++P
Sbjct: 587 GLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVP 646
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+TYN+ + L A+ + +++ GR A D +++ + ++ KA
Sbjct: 647 TVHTYNLMISNLIKEESYEEADNLFISVEKSGR-APDSRLLNHIVRMLLKKAEVAKASNY 705
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSE 282
L ++ N + S L +L+ + G E
Sbjct: 706 LSIIDENNLTLEASTISLLASLFSREGKCRE 736
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 101/262 (38%), Gaps = 1/262 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +T+ SL+ YC E+A ALL+ M + + + + +L+ Y K G + +
Sbjct: 472 NVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVF 531
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
++M + P S YN+ + L + A+++ EM G + T L +
Sbjct: 532 RDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGL-CR 590
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
++A L++L N D+ + +I+ + G E ++ ++ +
Sbjct: 591 NNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHT 650
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y MI L+ + A+ F E D R+ N ++ K+ + A
Sbjct: 651 YNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAKASNYLSIID 710
Query: 362 RRGADPNAKTWEIFSDYYLRNG 383
A T + + + R G
Sbjct: 711 ENNLTLEASTISLLASLFSREG 732
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/462 (19%), Positives = 195/462 (42%), Gaps = 31/462 (6%)
Query: 20 HLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYP------ 73
HL E Y RL S+V+ LN + S + +++ DT+ +++ +P
Sbjct: 139 HLAEEAY-RLVLSSDSEVNA-YTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHN 196
Query: 74 --------------ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLP 117
A+ L ++M +G+ + L + K + D A+ F +D
Sbjct: 197 VLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQC 256
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
+ + ++ L+ +C+ E+A ++M++ + + F+ L+ L++ G +
Sbjct: 257 SVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHA 316
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
A ++EMK ++PD Y + + +S A RV +EM G D T++ L +
Sbjct: 317 AAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLG-CLPDVVTYNTLLN 375
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
+ AE L E++ R DL + LI Y + GN + +++ +L
Sbjct: 376 GLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRP 435
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
++Y ++I + DL A + + + + + +++I ++ ++G++E A
Sbjct: 436 DVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFL 495
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 417
+ +G PN T+ Y R+G++K L+K + +P T T +
Sbjct: 496 DEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQD------NILPDLITFNTLI 549
Query: 418 RHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
+ +E+++ GA I++K + + +I ++ G
Sbjct: 550 HGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQG 591
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 124/276 (44%), Gaps = 1/276 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +LLN CK+ AE LL +MKE + F +L+ Y + G+ EK +
Sbjct: 368 VTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDT 427
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
+ + PD YN + + D++ A + ++M + + T+S L + E G
Sbjct: 428 LLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAR-EIFPNHVTYSILIDSHCEKG 486
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
E+A L E+ ++ ++ Y +I Y ++GN+ + + + + I++
Sbjct: 487 QVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFN 546
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I + +++ GA F E D N++I ++++G +E A + ++
Sbjct: 547 TLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGAS 606
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
G +P+ T+ + ++ G+ K A ++ + G
Sbjct: 607 GIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRG 642
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/299 (20%), Positives = 126/299 (42%), Gaps = 3/299 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL++ + M G V L+ + K + AE ++ E + + T+ +L++
Sbjct: 351 ALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIH 410
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
YC++ EKA L + + L + +NSL+ + G K + +M A I P
Sbjct: 411 GYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFP 470
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ TY++ + + + A ++EM G + + T++++ Y +G +K ++
Sbjct: 471 NHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLP-NIMTYNSIIKGYCRSGNVKKGQQF 529
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
L+++ N DL + LI Y + N+ + ++ + ++Y +I
Sbjct: 530 LQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSE 589
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
++ A + FK+ + D +I + G + A +L + RG P+ K
Sbjct: 590 QGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPDDK 648
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 132/313 (42%), Gaps = 11/313 (3%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TYG +++ YC E A LL +M L + + + S++ L G ++++
Sbjct: 286 VTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVED 345
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M ++ D+ + M D++ A +EM++ G +AAD T++ L + AG
Sbjct: 346 MVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRG-LAADGVTYTALINGLCRAG 404
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANIS 301
++AER L+E+E++ D Y LI Y + G ++E + + + + PN ++
Sbjct: 405 ELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNV--VT 462
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y + L D+ A + E S +I N +I K G LE A
Sbjct: 463 YTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMD 522
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
G P+ T+ ++ ++ A L++ +D G P+ T M F
Sbjct: 523 EAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKG------IKPTIVTYNVLMNGFC 576
Query: 422 QEKDVDGAEGFLE 434
V+G + LE
Sbjct: 577 MSGRVEGGKRLLE 589
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 99/220 (45%), Gaps = 5/220 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAA---ENYFVDLPETSKNHLTYGSLL 130
A ++ + ME +G++ + +D KV + A N V + N +TY +L
Sbjct: 409 AERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQ-KRVTPNVVTYTALS 467
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
+ CK+ A LL +M L + +NSL+ K G+ E+ + +M + +
Sbjct: 468 DGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLK 527
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
PD YTY + AL ++ A +++EM G + T++ L + + +G E +R
Sbjct: 528 PDVYTYTTIIGALCQSKELDRAHSLLQEMLDKG-IKPTIVTYNVLMNGFCMSGRVEGGKR 586
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
L+ + +N H + + Y L+ Y N+ I++ +
Sbjct: 587 LLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGM 626
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 132/318 (41%), Gaps = 44/318 (13%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVA---KVQGIDAAENYFVDLPE--TSKNHLTYGS 128
A+++ E+M G+ V D A+ +++ + + AA N+F ++ + + + +TY +
Sbjct: 339 AVRVVEDMVMHGV---VLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTA 395
Query: 129 LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS 188
L+N C+ ++AE +L++M++ L ++ + L+ Y K G + + +M
Sbjct: 396 LINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKR 455
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
+ P+ TY L D+ A ++ EM G + + T+++L + +AG E+A
Sbjct: 456 VTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG-LELNIFTYNSLINGLCKAGNLEQA 514
Query: 249 ERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQV 308
R + +++ + G +VY +Y +I
Sbjct: 515 MRTMIDMD-------------------EAGLKPDVY----------------TYTTIIGA 539
Query: 309 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 368
L K+L A +E I NV++ + GR+E + L E + PN
Sbjct: 540 LCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPN 599
Query: 369 AKTWEIFSDYYLRNGDMK 386
T+ Y +MK
Sbjct: 600 TTTYNSLMKQYCIEKNMK 617
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/330 (20%), Positives = 117/330 (35%), Gaps = 18/330 (5%)
Query: 152 LNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSI------MPDSYT--YNVWMRAL 203
L L S P + Y + PE A++ + +P+ T YN+ ++AL
Sbjct: 204 LLLCLPSAPLLLRLRQYGISPSPESCNAVLCRLPLDEAVQLFQELPEKNTCSYNILLKAL 263
Query: 204 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 263
I A ++ +EM D T+ + Y E A + L E+ R +
Sbjct: 264 CTAGRIKDAHQLFDEMAS----PPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELN 319
Query: 264 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 323
AY +I L G +S+ R+ + + + ++ DL A F
Sbjct: 320 PVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFD 379
Query: 324 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
E + D +I + G L+ AE + + +G D +A T+ + D Y + G
Sbjct: 380 EMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVG 439
Query: 384 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDL 443
M A K + + P+ T ++ DV A L + +L
Sbjct: 440 KMTEAFLVHNKMVQK------RVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLEL 493
Query: 444 GVEVFEPLIRTYAAAGRTSPVMLRRLKMEK 473
+ + LI AG M + M++
Sbjct: 494 NIFTYNSLINGLCKAGNLEQAMRTMIDMDE 523
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 92/210 (43%), Gaps = 5/210 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A++ +M++ G+ V + + + + +D A + ++ + +TY L+N
Sbjct: 514 AMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMN 573
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C E + LLE M E N+ ++ +NSLM Y + + I + M + ++P
Sbjct: 574 GFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVP 633
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDG-RVAADWTTFSNLASIYVEAGLFEKAER 250
+ TYN+ ++ ++ A EM G R+ A ++++ L + + F +A R
Sbjct: 634 NENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTA--SSYNALIRLLNKKKKFTEARR 691
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNL 280
+++ + Y F I L NL
Sbjct: 692 LFEKMRKDRLTAEPDVYNFYIDLSFNEDNL 721
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 132/313 (42%), Gaps = 11/313 (3%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TYG +++ YC E A LL +M L + + + S++ L G ++++
Sbjct: 286 VTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVED 345
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M ++ D+ + M D++ A +EM++ G +AAD T++ L + AG
Sbjct: 346 MVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRG-LAADGVTYTALINGLCRAG 404
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANIS 301
++AER L+E+E++ D Y LI Y + G ++E + + + + PN ++
Sbjct: 405 ELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNV--VT 462
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y + L D+ A + E S +I N +I K G LE A
Sbjct: 463 YTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMD 522
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
G P+ T+ ++ ++ A L++ +D G P+ T M F
Sbjct: 523 EAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKG------IKPTIVTYNVLMNGFC 576
Query: 422 QEKDVDGAEGFLE 434
V+G + LE
Sbjct: 577 MSGRVEGGKRLLE 589
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 99/220 (45%), Gaps = 5/220 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAA---ENYFVDLPETSKNHLTYGSLL 130
A ++ + ME +G++ + +D KV + A N V + N +TY +L
Sbjct: 409 AERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQ-KRVTPNVVTYTALS 467
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
+ CK+ A LL +M L + +NSL+ K G+ E+ + +M + +
Sbjct: 468 DGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLK 527
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
PD YTY + AL ++ A +++EM G + T++ L + + +G E +R
Sbjct: 528 PDVYTYTTIIGALCQSKELDRAHSLLQEMLDKG-IKPTIVTYNVLMNGFCMSGRVEGGKR 586
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
L+ + +N H + + Y L+ Y N+ I++ +
Sbjct: 587 LLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGM 626
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 132/318 (41%), Gaps = 44/318 (13%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVA---KVQGIDAAENYFVDLPE--TSKNHLTYGS 128
A+++ E+M G+ V D A+ +++ + + AA N+F ++ + + + +TY +
Sbjct: 339 AVRVVEDMVMHGV---VLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTA 395
Query: 129 LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS 188
L+N C+ ++AE +L++M++ L ++ + L+ Y K G + + +M
Sbjct: 396 LINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKR 455
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
+ P+ TY L D+ A ++ EM G + + T+++L + +AG E+A
Sbjct: 456 VTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG-LELNIFTYNSLINGLCKAGNLEQA 514
Query: 249 ERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQV 308
R + +++ + G +VY +Y +I
Sbjct: 515 MRTMIDMD-------------------EAGLKPDVY----------------TYTTIIGA 539
Query: 309 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 368
L K+L A +E I NV++ + GR+E + L E + PN
Sbjct: 540 LCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPN 599
Query: 369 AKTWEIFSDYYLRNGDMK 386
T+ Y +MK
Sbjct: 600 TTTYNSLMKQYCIEKNMK 617
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/330 (20%), Positives = 117/330 (35%), Gaps = 18/330 (5%)
Query: 152 LNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSI------MPDSYT--YNVWMRAL 203
L L S P + Y + PE A++ + +P+ T YN+ ++AL
Sbjct: 204 LLLCLPSAPLLLRLRQYGISPSPESCNAVLCRLPLDEAVQLFQELPEKNTCSYNILLKAL 263
Query: 204 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 263
I A ++ +EM D T+ + Y E A + L E+ R +
Sbjct: 264 CTAGRIKDAHQLFDEMAS----PPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELN 319
Query: 264 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 323
AY +I L G +S+ R+ + + + ++ DL A F
Sbjct: 320 PVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFD 379
Query: 324 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
E + D +I + G L+ AE + + +G D +A T+ + D Y + G
Sbjct: 380 EMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVG 439
Query: 384 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDL 443
M A K + + P+ T ++ DV A L + +L
Sbjct: 440 KMTEAFLVHNKMVQK------RVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLEL 493
Query: 444 GVEVFEPLIRTYAAAGRTSPVMLRRLKMEK 473
+ + LI AG M + M++
Sbjct: 494 NIFTYNSLINGLCKAGNLEQAMRTMIDMDE 523
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 92/210 (43%), Gaps = 5/210 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A++ +M++ G+ V + + + + +D A + ++ + +TY L+N
Sbjct: 514 AMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMN 573
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C E + LLE M E N+ ++ +NSLM Y + + I + M + ++P
Sbjct: 574 GFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVP 633
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDG-RVAADWTTFSNLASIYVEAGLFEKAER 250
+ TYN+ ++ ++ A EM G R+ A ++++ L + + F +A R
Sbjct: 634 NENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTA--SSYNALIRLLNKKKKFTEARR 691
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNL 280
+++ + Y F I L NL
Sbjct: 692 LFEKMRKERLTAEPDVYNFYIDLSFNEDNL 721
>gi|414591144|tpg|DAA41715.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea mays]
Length = 521
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 143/324 (44%), Gaps = 26/324 (8%)
Query: 94 AIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKE 151
++ +D + K +D A D+P S N L Y SLL+CY ++ + + +LE M+
Sbjct: 135 SVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMEN 194
Query: 152 LNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISG 211
+ + + L+ + K+ A+ EMKA++++ D Y Y + A ++
Sbjct: 195 EGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRR 254
Query: 212 AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 271
A +V++E +G V + T+ L + + G E AE L +++ + + + +I
Sbjct: 255 AAKVLDECVGNG-VEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMI 313
Query: 272 TLYGQTGNLSEVYRI---------------WRSLRLAF------PNTANISYLNMIQVLV 310
Y + G + + +I + +L PN ++Y +I +
Sbjct: 314 DGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCRMGVVPNY--VTYTTLISIHC 371
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
D+ A + F+E AT + +VMI YAK+GR+ AE ++ ++G P+
Sbjct: 372 KDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVPDVY 431
Query: 371 TWEIFSDYYLRNGDMKLAVDCLEK 394
T+ + NG + +A+ E+
Sbjct: 432 TYASLVHGHCVNGKVDVALKLFEE 455
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 106/253 (41%), Gaps = 21/253 (8%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N TYG L+ +CK E AE LL M+ +G + + FN+++ Y + G + I
Sbjct: 270 NERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIK 329
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M+ + + YTYN L + V ++ T++ L SI+ +
Sbjct: 330 AAMEKIGVELNIYTYNTLACGLCRMG-----------------VVPNYVTYTTLISIHCK 372
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTAN 299
G +A R +E+ + A + Y +I Y + G + E R + + + P+
Sbjct: 373 DGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVPDV-- 430
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+Y +++ + A K F+E + ++ +I AKEGR E A +L +
Sbjct: 431 YTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDD 490
Query: 360 ARRRGADPNAKTW 372
+ G P+ +
Sbjct: 491 MLKAGLIPDDSLY 503
>gi|2462828|gb|AAB72163.1| hypothetical protein [Arabidopsis thaliana]
Length = 1152
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 147/368 (39%), Gaps = 47/368 (12%)
Query: 61 TLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS 120
LK LRD ++ A + E M + G+ TV LD K ++ + ++++ +
Sbjct: 246 VLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRN 305
Query: 121 K--NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
+ +TY L+N + K E+A M+ + FN L+ Y K G +
Sbjct: 306 IEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAW 365
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+ EM + I P + TYN+++ AL I A ++ M A D +++ L
Sbjct: 366 GVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM-----AAPDVVSYNTLMHG 420
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPN 296
Y++ G F +A +L + H + Y LI ++GNL R+ + +L FP+
Sbjct: 421 YIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPD 480
Query: 297 TANISYLNMIQVLVNLKDLPGA--------------------------------EKCFKE 324
I+Y +++ V +L A +K F+
Sbjct: 481 V--ITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRL 538
Query: 325 WESGCAT----YDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 380
E AT D+ + NV I K G L A E + + R G P+ T+ YL
Sbjct: 539 HEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYL 598
Query: 381 RNGDMKLA 388
NG K+A
Sbjct: 599 ENGQFKMA 606
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 130/303 (42%), Gaps = 4/303 (1%)
Query: 70 LYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSL 129
L+ A +++ M G+ T S I++ + ID A + + + ++Y +L
Sbjct: 360 LFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM--AAPDVVSYNTL 417
Query: 130 LNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
++ Y K +A L + ++ ++ S + +N+L+ ++G+ E + +EM I
Sbjct: 418 MHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLI 477
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
PD TY ++ ++S A V +EM R G + D ++ A + G +KA
Sbjct: 478 FPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKG-IKPDGYAYTTRAVGELRLGDSDKAF 536
Query: 250 RALKELENRNAHR-DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQV 308
R +E+ + H DL+ Y I + GNL + R + +++Y +I+
Sbjct: 537 RLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRG 596
Query: 309 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 368
+ A + E + V+I +AK GRLE A + ++RG PN
Sbjct: 597 YLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPN 656
Query: 369 AKT 371
T
Sbjct: 657 VMT 659
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+H+TY +++ Y + + A L ++M L S + + L+ +AK G E+
Sbjct: 586 DHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYS 645
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EMK + P+ T+N + + +I A R + +M+ +G + + +++ L S +
Sbjct: 646 TEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEG-IPPNKYSYTMLISKNCD 704
Query: 242 AGLFEKAERALK 253
FEK E +K
Sbjct: 705 ---FEKWEEVVK 713
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 171/394 (43%), Gaps = 20/394 (5%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAK---VQGIDAAENYFVDLPETSKNHLTYGSLL 130
A +L + M+KR + TV ++ ++ + + +QG +A V + N + Y +L+
Sbjct: 400 AFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMV-MNGLKPNAVVYTTLM 458
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
+ KE E++ +LE+M+E + +NSL+ + K E+ + EM +
Sbjct: 459 TAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLR 518
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
P+++TY ++ + ++ A+R EM G V + ++ L + + G +A
Sbjct: 519 PNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCG-VLPNVGIYTALIEGHCKEGNVTEAFS 577
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQV 308
+ + +R +D+ Y LI + G + E + I+ L + PN +Y ++I
Sbjct: 578 VFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNA--FTYNSLISG 635
Query: 309 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 368
++ A + +E DI N++I K G +E A+ L + RG PN
Sbjct: 636 SCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPN 695
Query: 369 AKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF--EQEKDV 426
T+ D Y ++ + A LE+ + G VP I + +F ++EK
Sbjct: 696 CVTYAAMVDGYCKSKNPTAAFQLLEEMLLRG-------VPPDAFIYNVILNFCCKEEKFE 748
Query: 427 DGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 460
+ F E+L+K F LI Y +G+
Sbjct: 749 KALDLFQEMLEKGFAS--TVSFNTLIEGYCKSGK 780
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 108/264 (40%), Gaps = 1/264 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY L+N +C E + +A+ +L +M ++ L + +N+L+ + + G E+ I EM
Sbjct: 278 TYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEM 337
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
A I + +N + + + A +++EM G V D T+S L +
Sbjct: 338 VACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKG-VEPDSQTYSLLIEGHCRGQN 396
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+A L E++ R + Y +I + GNL I R + + + Y
Sbjct: 397 MARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTT 456
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
++ + + + D+ N +I + K R+E A R
Sbjct: 457 LMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERR 516
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLA 388
PNA T+ F D Y + G+M++A
Sbjct: 517 LRPNAHTYGAFIDGYSKAGEMEIA 540
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 100/219 (45%), Gaps = 4/219 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A +L E M +G+N + I +D + K I+ A+N F D+ + N +TY ++++
Sbjct: 645 ASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVD 704
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
YCK A LLE+M + + +N ++ K EK + QEM
Sbjct: 705 GYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-A 763
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ ++N + + A ++EEM + + + T+++L +AG+ +A+R
Sbjct: 764 STVSFNTLIEGYCKSGKLQEANHLLEEMI-EKQFIPNHVTYTSLIDHNCKAGMMGEAKRL 822
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
E++ RN Y L+ Y GN+SEV ++ +
Sbjct: 823 WLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEM 861
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 134/313 (42%), Gaps = 9/313 (2%)
Query: 77 LSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYC 134
L E +E+R + +D +K ++ A+ YF ++ N Y +L+ +C
Sbjct: 509 LMEMLERR-LRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHC 567
Query: 135 KELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSY 194
KE +A ++ + + ++ L+ ++ G + I E++ ++P+++
Sbjct: 568 KEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAF 627
Query: 195 TYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE 254
TYN + ++ A +++EEM G + D T++ L +AG E+A+ +
Sbjct: 628 TYNSLISGSCKQGNVDKASQLLEEMCIKG-INPDIVTYNILIDGLCKAGEIERAKNLFDD 686
Query: 255 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL-AFPNTANISYLNMIQVLVNLK 313
+E R + Y ++ Y ++ N + +++ + L P A I Y ++ +
Sbjct: 687 IEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFI-YNVILNFCCKEE 745
Query: 314 DLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
A F+E E G A+ N +I Y K G+L+ A L E + PN T+
Sbjct: 746 KFEKALDLFQEMLEKGFAS--TVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTY 803
Query: 373 EIFSDYYLRNGDM 385
D+ + G M
Sbjct: 804 TSLIDHNCKAGMM 816
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 134/321 (41%), Gaps = 9/321 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N TY SL++ CK+ +KA LLE+M + + +N L+ K G E+ +
Sbjct: 625 NAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLF 684
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+++ + P+ TY + + + A +++EEM G V D ++ + + +
Sbjct: 685 DDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRG-VPPDAFIYNVILNFCCK 743
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTAN 299
FEKA +E+ + +S + LI Y ++G L E + + + PN +
Sbjct: 744 EEKFEKALDLFQEMLEKGFASTVS-FNTLIEGYCKSGKLQEANHLLEEMIEKQFIPN--H 800
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
++Y ++I + A++ + E + + ++ Y G + L E
Sbjct: 801 VTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEE 860
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
+G +P+ T+ + D Y R G++ A ++ + G + T R
Sbjct: 861 MVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARG 920
Query: 420 FEQEKDVDGAEGFLEILKKAV 440
F+ ++D A E+L+ V
Sbjct: 921 FQIAGNMDEAA---EVLRSMV 938
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 68/336 (20%), Positives = 140/336 (41%), Gaps = 18/336 (5%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N + + +LLN CK EKA ++++M E + S ++ L+ + + + + ++
Sbjct: 345 NLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELL 404
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EMK + P TY+V + L ++ G ++ EM +G + + ++ L + + +
Sbjct: 405 DEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNG-LKPNAVVYTTLMTAHAK 463
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE--VYRIWRSLRLAFPNTAN 299
G E++ L+ + + D+ Y LI + + + E Y + R PN
Sbjct: 464 EGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAH- 522
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+Y I ++ A++ F E S ++ + +I + KEG + A +
Sbjct: 523 -TYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRF 581
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
R + +T+ + RNG M A + + G +P++ T + +
Sbjct: 582 ILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKG------LLPNAFTYNSLISG 635
Query: 420 FEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 455
++ +VD A LE ++ ++ P I TY
Sbjct: 636 SCKQGNVDKASQLLE-------EMCIKGINPDIVTY 664
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 92/191 (48%), Gaps = 12/191 (6%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
AL L + M ++G TVS + ++ K + A + ++ E NH+TY SL++
Sbjct: 750 ALDLFQEMLEKGFASTVSFNTL-IEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLID 808
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK M +A+ L +M+E N+ ++ + SL+ Y G+ ++ A+ +EM A I P
Sbjct: 809 HNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEP 868
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEE-------MKRDGRVAADWTTFSNLASIYVEAGL 244
D TY V + A ++ A ++ +E MK R+ T S +A + AG
Sbjct: 869 DKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLG--LPTCSVIARGFQIAGN 926
Query: 245 FEKAERALKEL 255
++A L+ +
Sbjct: 927 MDEAAEVLRSM 937
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/358 (19%), Positives = 140/358 (39%), Gaps = 29/358 (8%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S N + + L++ Y K +A + K S + NSL+ K E
Sbjct: 151 SPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWK 210
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+ M A ++PD YTY + A V ++ A+RV+ EM R
Sbjct: 211 VFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKAR--------------- 255
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
L ++A + + ++ DL Y LI + E + +
Sbjct: 256 ----LLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEP 311
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
I+Y +I + D+ A + E + ++ + N ++ K G++E A E+ +
Sbjct: 312 ITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQE 371
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
+G +P+++T+ + + + R +M A + L++ K P+ T +
Sbjct: 372 MMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKR------KLAPTVLTYSVIING 425
Query: 420 FEQEKDVDGAEGFL-EILKKAVDDLGVEVFEPLIRTYAAAGRT--SPVMLRRLKMEKV 474
+ ++ G L E++ + V V+ L+ +A GR S ++L R++ + +
Sbjct: 426 LCRCGNLQGTNAILREMVMNGLKPNAV-VYTTLMTAHAKEGRVEESRMILERMREQGI 482
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 127/269 (47%), Gaps = 4/269 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+H+TY +L+N CK M KAE L+ +M++ + S FN+L+ Y G EK ++
Sbjct: 403 DHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVL 462
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYV 240
+M+ I D ++ ++A I A ++++M +D VA + ++++ Y+
Sbjct: 463 SDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKD--VAPNAQVYNSIIDAYI 520
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
E+G E+A +++++N + Y L+ ++ + E + +LR +
Sbjct: 521 ESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVV 580
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
SY +I N D A + +E +R + ++ A A GR+ + E L ++
Sbjct: 581 SYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQM 640
Query: 361 RRRGADPNAKTWEIFSDYYLR-NGDMKLA 388
+ +P++ + I D Y+R D K+A
Sbjct: 641 LHKNVEPSSSIYGIMVDAYVRCENDSKVA 669
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 122/272 (44%), Gaps = 5/272 (1%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
T LLN CK+ KAE +LE + L +++ +N+L+ Y + I ++M
Sbjct: 336 TCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQM 395
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
K+ I PD TYN + L + ++ AE ++ EM++ G V TF+ L Y AG
Sbjct: 396 KSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSG-VDPSVETFNTLIDAYGTAGQ 454
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISY 302
EK L +++ + D+ ++ ++ + + G + E I + + PN Y
Sbjct: 455 LEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQ--VY 512
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
++I + D A ++ ++ + I N+++ + +++ AEEL R
Sbjct: 513 NSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRN 572
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
+G P+ ++ GD A++ L++
Sbjct: 573 QGLRPDVVSYNTIISACCNKGDTDKALELLQE 604
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 116/275 (42%), Gaps = 1/275 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY ++++ + K E L ++M + + +N L++ + G ++ ++
Sbjct: 228 NWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLM 287
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EM + S+ PD +TY++ L + + E + G + +T S L + +
Sbjct: 288 DEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTC-SILLNGLCK 346
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G KAE+ L+ L + Y LI Y Q +L + I+ ++ +I+
Sbjct: 347 DGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHIT 406
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I L L+ + AE E E + N +I AY G+LE + +
Sbjct: 407 YNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQ 466
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 396
++G + ++ + +NG + AV L+ I
Sbjct: 467 QKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMI 501
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 100/212 (47%), Gaps = 3/212 (1%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELM 138
MEK G++ +V +D ++ D+ + + +++GS++ +CK
Sbjct: 430 MEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGK 489
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
+A A+L+ M ++ ++ +NS++ Y ++G E+ ++++MK S + TYN+
Sbjct: 490 IPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNL 549
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
++ L + I AE +I ++ G + D +++ + S G +KA L+E+
Sbjct: 550 LLKGLCRSSQIDEAEELIYTLRNQG-LRPDVVSYNTIISACCNKGDTDKALELLQEMNKY 608
Query: 259 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
L Y L++ G + ++ +++ +
Sbjct: 609 GIRPTLRTYHTLVSALASAGRVHDMECLYQQM 640
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 105/272 (38%), Gaps = 11/272 (4%)
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
PD+++YNV + L S A +V +EM G V +W T++ + +V+ G E R
Sbjct: 192 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMG-VVPNWITYNTMIDGHVKGGDLEAGFR 250
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQV 308
++ + ++ Y L++ + G + E + + FP+ +Y +
Sbjct: 251 LRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPD--GFTYSILFDG 308
Query: 309 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 368
L + F E ++++ K+G++ AE++ E G P
Sbjct: 309 LTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPT 368
Query: 369 AKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDG 428
+ + Y + D++ A E+ P T + + + V
Sbjct: 369 TVIYNTLINGYCQVRDLRGAFCIFEQM------KSRHIRPDHITYNALINGLCKLEMVTK 422
Query: 429 AEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 460
AE + ++K+ D VE F LI Y AG+
Sbjct: 423 AEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQ 454
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 147/337 (43%), Gaps = 13/337 (3%)
Query: 70 LYYPALKLSENMEKRGMNKTVSDQAIHLDLV---AKVQGIDAAENYFVDLPETS--KNHL 124
+ + AL +N+ +G + DQ + L+ +K I AA + ++ ++S N +
Sbjct: 140 MIFKALDFCQNLLAQGY---LFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLV 196
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
Y +L++ CK+ A L ++ E + ++ +NSL+ G +++ ++ +M
Sbjct: 197 MYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKM 256
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
++ PD YT+N+ + AL I A+ V+ M + G D T++ L Y
Sbjct: 257 VRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGE-KPDIVTYNALMEGYCSREN 315
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISY 302
+A + R D+ Y LI Y +T + E +++ L + P A SY
Sbjct: 316 VHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIA--SY 373
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
++I L N + +K E D+ N++I A KEGR+ A + +
Sbjct: 374 NSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMK 433
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+G PN T+ D Y ++ +A D + + +G
Sbjct: 434 KGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSG 470
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 135/343 (39%), Gaps = 45/343 (13%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
L Y L++ YCK M ++A L +++ NL + +NSL+ +G + ++ E
Sbjct: 336 LNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDE 395
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M S+ PD TYN+ + AL I A V+ M + G V + T++ + Y
Sbjct: 396 MHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKG-VKPNIVTYNAMMDGYCLRN 454
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTANIS 301
A+ + D+ Y LI Y +T + E +++ +R P+ A S
Sbjct: 455 NVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIA--S 512
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAK--------------- 346
Y ++I L NL +P ++ E + D+ N+++ A+ K
Sbjct: 513 YNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV 572
Query: 347 EG-------------------RLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKL 387
EG +L+ AE+ + G PN +T+ I + ++G
Sbjct: 573 EGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGE 632
Query: 388 AVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 430
A+ L K D R P + T + Q + D AE
Sbjct: 633 AMLLLSKMEDNDRP------PDAITFEIIIGVLLQRNETDKAE 669
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/353 (19%), Positives = 137/353 (38%), Gaps = 43/353 (12%)
Query: 68 RKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHL--- 124
R+ + A +L M KRG+ V + + +D K + +D A F +L +KN +
Sbjct: 313 RENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKEL--CNKNLVPTI 370
Query: 125 -TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+Y SL++ C + LL++M + +N L+ K G + ++
Sbjct: 371 ASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVM 430
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + P+ TYN M N+++ A+ + M + G + D ++ L + Y +
Sbjct: 431 MMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSG-LEPDILNYNVLINGYCKTE 489
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
+ ++A KE+ ++N D+++Y LI G + V + + + + I+Y
Sbjct: 490 MVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYN 549
Query: 304 NMIQVLVNLKDLPGAEKCFKE-----WES------------------------------G 328
++ + A F++ W G
Sbjct: 550 ILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHG 609
Query: 329 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 381
C+ +++ ++I A K+G A L + P+A T+EI L+
Sbjct: 610 CSP-NVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQ 661
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 98/257 (38%), Gaps = 1/257 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
T+ L+NCY + T A +LL + + + + FN+++ + G K Q +
Sbjct: 92 TFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNL 151
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
A + D +TY + L+ I A +++EM++ V + +S L + G
Sbjct: 152 LAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSS-VQPNLVMYSALIDGLCKDGF 210
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
A ++ R D Y LI G EV ++ + + + ++
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+I L + A+ DI N ++ Y + A EL R +RG
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330
Query: 365 ADPNAKTWEIFSDYYLR 381
+P+ + + D Y +
Sbjct: 331 LEPDVLNYNVLIDGYCK 347
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 171/394 (43%), Gaps = 20/394 (5%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAK---VQGIDAAENYFVDLPETSKNHLTYGSLL 130
A +L + M+KR + TV ++ ++ + + +QG +A V + N + Y +L+
Sbjct: 409 AFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMV-MNGLKPNAVVYTTLM 467
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
+ KE E++ +LE+M+E + +NSL+ + K E+ + EM +
Sbjct: 468 TAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLR 527
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
P+++TY ++ + ++ A+R EM G V + ++ L + + G +A
Sbjct: 528 PNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCG-VLPNVGIYTALIEGHCKEGNVTEAFS 586
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQV 308
+ + +R +D+ Y LI + G + E + I+ L + PN +Y ++I
Sbjct: 587 VFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNA--FTYNSLISG 644
Query: 309 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 368
++ A + +E DI N++I K G +E A+ L + RG PN
Sbjct: 645 SCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPN 704
Query: 369 AKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF--EQEKDV 426
T+ D Y ++ + A LE+ + G VP I + +F ++EK
Sbjct: 705 CVTYAAMVDGYCKSKNPTAAFQLLEEMLLRG-------VPPDAFIYNVILNFCCKEEKFE 757
Query: 427 DGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 460
+ F E+L+K F LI Y +G+
Sbjct: 758 KALDLFQEMLEKGFAS--TVSFNTLIEGYCKSGK 789
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 108/264 (40%), Gaps = 1/264 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY L+N +C E + +A+ +L +M ++ L + +N+L+ + + G E+ I EM
Sbjct: 287 TYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEM 346
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
A I + +N + + + A +++EM G V D T+S L +
Sbjct: 347 VACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKG-VEPDSQTYSLLIEGHCRGQN 405
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+A L E++ R + Y +I + GNL I R + + + Y
Sbjct: 406 MARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTT 465
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
++ + + + D+ N +I + K R+E A R
Sbjct: 466 LMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERR 525
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLA 388
PNA T+ F D Y + G+M++A
Sbjct: 526 LRPNAHTYGAFIDGYSKAGEMEIA 549
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 134/313 (42%), Gaps = 9/313 (2%)
Query: 77 LSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYC 134
L E +E+R + +D +K ++ A+ YF ++ N Y +L+ +C
Sbjct: 518 LMEMLERR-LRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHC 576
Query: 135 KELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSY 194
KE +A ++ + + ++ L+ ++ G + I E++ ++P+++
Sbjct: 577 KEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAF 636
Query: 195 TYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE 254
TYN + ++ A +++EEM G + D T++ L +AG E+A+ +
Sbjct: 637 TYNSLISGSCKQGNVDKASQLLEEMCIKG-INPDIVTYNILIDGLCKAGEIERAKNLFDD 695
Query: 255 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL-AFPNTANISYLNMIQVLVNLK 313
+E R + Y ++ Y ++ N + +++ + L P A I Y ++ +
Sbjct: 696 IEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFI-YNVILNFCCKEE 754
Query: 314 DLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
A F+E E G A+ N +I Y K G+L+ A L E + PN T+
Sbjct: 755 KFEKALDLFQEMLEKGFAS--TVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTY 812
Query: 373 EIFSDYYLRNGDM 385
D+ + G M
Sbjct: 813 TSLIDHNCKAGMM 825
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/336 (20%), Positives = 140/336 (41%), Gaps = 18/336 (5%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N + + +LLN CK EKA ++++M E + S ++ L+ + + + + ++
Sbjct: 354 NLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELL 413
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EMK + P TY+V + L ++ G ++ EM +G + + ++ L + + +
Sbjct: 414 DEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNG-LKPNAVVYTTLMTAHAK 472
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE--VYRIWRSLRLAFPNTAN 299
G E++ L+ + + D+ Y LI + + + E Y + R PN
Sbjct: 473 EGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAH- 531
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+Y I ++ A++ F E S ++ + +I + KEG + A +
Sbjct: 532 -TYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRF 590
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
R + +T+ + RNG M A + + G +P++ T + +
Sbjct: 591 ILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKG------LLPNAFTYNSLISG 644
Query: 420 FEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 455
++ +VD A LE ++ ++ P I TY
Sbjct: 645 SCKQGNVDKASQLLE-------EMCIKGINPDIVTY 673
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 115/266 (43%), Gaps = 6/266 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N TY SL++ CK+ +KA LLE+M + + +N L+ K G E+ +
Sbjct: 634 NAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLF 693
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+++ + P+ TY + + + A +++EEM G V D ++ + + +
Sbjct: 694 DDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRG-VPPDAFIYNVILNFCCK 752
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTAN 299
FEKA +E+ + +S + LI Y ++G L E + + + PN +
Sbjct: 753 EEKFEKALDLFQEMLEKGFASTVS-FNTLIEGYCKSGKLQEANHLLEEMIEKQFIPN--H 809
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
++Y ++I + A++ + E + + ++ Y G + L E
Sbjct: 810 VTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEE 869
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDM 385
+G +P+ T+ + D Y R G++
Sbjct: 870 MVAKGIEPDKMTYYVMIDAYCREGNV 895
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/358 (20%), Positives = 147/358 (41%), Gaps = 11/358 (3%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S N + + L++ Y K +A + K S + NSL+ K E
Sbjct: 142 SPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWK 201
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+ M A ++PD YTY + A V ++ A+RV+ EM G + + T++ +
Sbjct: 202 VFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKG-CSPNLVTYNVIIGGL 260
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
A L ++A + + ++ DL Y LI + E + +
Sbjct: 261 CRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEP 320
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
I+Y +I + D+ A + E + ++ + N ++ K G++E A E+ +
Sbjct: 321 ITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQE 380
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
+G +P+++T+ + + + R +M A + L++ K P+ T +
Sbjct: 381 MMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKR------KLAPTVLTYSVIING 434
Query: 420 FEQEKDVDGAEGFL-EILKKAVDDLGVEVFEPLIRTYAAAGRT--SPVMLRRLKMEKV 474
+ ++ G L E++ + V V+ L+ +A GR S ++L R++ + +
Sbjct: 435 LCRCGNLQGTNAILREMVMNGLKPNAV-VYTTLMTAHAKEGRVEESRMILERMREQGI 491
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 98/219 (44%), Gaps = 4/219 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
AL L + M ++G TVS + ++ K + A + ++ E NH+TY SL++
Sbjct: 759 ALDLFQEMLEKGFASTVSFNTL-IEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLID 817
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK M +A+ L +M+E N+ ++ + SL+ Y G+ ++ A+ +EM A I P
Sbjct: 818 HNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEP 877
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D TY V + A ++ A ++ +E+ G + + L + F + +
Sbjct: 878 DKMTYYVMIDAYCREGNVMEACKLKDEILVKG-MPMSVAAYDALIQALCKKEEFFEVLKL 936
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
L E+ L + + GN+ E + RS+
Sbjct: 937 LNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSM 975
>gi|357481229|ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512235|gb|AES93858.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1508
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 128/278 (46%), Gaps = 3/278 (1%)
Query: 124 LTYGSLLNCYCKELMTEKAEA--LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+++ +L+N K T A LL+++ + L + +N+L++ ++ + ++ +
Sbjct: 300 VSFNTLINAKVKSCATVSGLAIELLDEVGKFGLRPDIITYNTLISACSRESNLKEAIGVF 359
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M+++ PD +TYN + AE + E++K +G + D T+++L + +
Sbjct: 360 SHMESNRCQPDLWTYNAMISVYGRCGFALKAEHLFEKLKSNG-FSPDAVTYNSLLYAFSK 418
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G EK +E+ +D Y +I +YG+ G E R++R ++ + N ++
Sbjct: 419 EGNTEKVRDISEEMVKMGFGKDEMTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDAVT 478
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I +L + A K E + + +I AYAK GR AEE R R
Sbjct: 479 YTVLIDLLGKASKIEEASKVMSEMLDAGVKPTLHTYSALICAYAKVGRRVEAEETFNRMR 538
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
G + + + D++LR ++K A ++ I+ G
Sbjct: 539 ESGIKADHLAYSVMLDFFLRFNEIKKAAALYQEMIEAG 576
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 3/168 (1%)
Query: 109 AENYFVDLPET--SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMT 166
AE+ F L S + +TY SLL + KE TEK + E+M ++ G M +N+++
Sbjct: 390 AEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIH 449
Query: 167 LYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA 226
+Y K G ++ + ++MK+S PD+ TY V + L + I A +V+ EM D V
Sbjct: 450 MYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEASKVMSEM-LDAGVK 508
Query: 227 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLY 274
T+S L Y + G +AE + D AY ++ +
Sbjct: 509 PTLHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHLAYSVMLDFF 556
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 91/425 (21%), Positives = 172/425 (40%), Gaps = 20/425 (4%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS-KNHL-TYGSLLN 131
AL+L +M+ G N + +DL+ K I+ A ++ + K L TY +L+
Sbjct: 460 ALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEASKVMSEMLDAGVKPTLHTYSALIC 519
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
Y K +AE +M+E + + ++ ++ + + +K A+ QEM + P
Sbjct: 520 AYAKVGRRVEAEETFNRMRESGIKADHLAYSVMLDFFLRFNEIKKAAALYQEMIEAGFTP 579
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D+ Y V + AL N ERV+++ K G + +++S+ V+ G ++ +
Sbjct: 580 DTGLYEVMLPALVRENMGDVIERVVQDTKELGSMNP-----HDISSVLVKGGCYDHGAKM 634
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
LK + D + +++ Y + SE + R P+ + +I +L
Sbjct: 635 LKVAISNGYELDREIFLSIMSSYSSSARYSEACELVEFFREHAPDDIQMITEALIIILCK 694
Query: 312 LKDLPGAEKCFKEWES--GCATY-DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 368
L A +E+ S G T+ + +I K + + A +L R G +P+
Sbjct: 695 AGKLDAA---LEEYRSRGGLGTFRSCTMYESLIHECTKSEQFDIASQLFSDMRFNGVEPS 751
Query: 369 AKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDG 428
++ Y R G + A L A V + I T+ + K
Sbjct: 752 ECLYQSMVSVYCRIGFPETAQHLLYHAEKNDIILDNVTVHIIDIIETYGKL----KMWQS 807
Query: 429 AEGFLEILKKAVDDLGVEVFEPLIRTYAAAG---RTSPVMLRRLKMEKVEVSEASKKLLE 485
AE +E L++ + +V+ LI YA +G R + ++ E+ LL+
Sbjct: 808 AESIVENLRQRCSKMDRKVWNALIHAYAFSGCYERARAIFNTMMREGPSPTVESVNGLLQ 867
Query: 486 AICVE 490
A+ V+
Sbjct: 868 ALIVD 872
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 103/241 (42%), Gaps = 1/241 (0%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
+ S+L Y + + + +++ L +N+L+T+Y + PE+ +++ +MK
Sbjct: 967 FNSVLKLYSSIEEFQNMGVIYQMIQDAGLAPDEETYNTLITMYCRDHRPEEGLSLMHKMK 1026
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
+ + P TY + A + AE + EE++ +G D + + + +Y +G
Sbjct: 1027 SLGLEPKRDTYRSMIAAFSKQQLYDQAEELFEELRSNG-YKLDRSFYHLMMKMYRTSGDH 1085
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
+KAE L+ ++ + + L+ YG++G E RI ++LR + Y ++
Sbjct: 1086 QKAENLLEIMKEAGIEPNTATMHLLMVSYGKSGQPEEADRILKNLRTMGAVLDTLPYSSV 1145
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
I + D + E + D R+ I A + G + +A L + G
Sbjct: 1146 IDAYLKKGDAKAGIEKLTEMKEAAIEPDHRIWTCFIRAASLSGEVNDANNLLNALQAVGF 1205
Query: 366 D 366
D
Sbjct: 1206 D 1206
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 123/290 (42%), Gaps = 22/290 (7%)
Query: 93 QAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKEL 152
QA +L V KV A YF + HL Y ++ C+ +L +M E
Sbjct: 906 QAGNLFEVQKVYNGMKAAGYFPTM------HL-YRLMIGLLCRFKRVRDVRVMLSEMGEA 958
Query: 153 NLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA 212
FNS++ LY+ + + I Q ++ + + PD TYN + +
Sbjct: 959 GFKPDLQIFNSVLKLYSSIEEFQNMGVIYQMIQDAGLAPDEETYNTLITMYCRDHRPEEG 1018
Query: 213 ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLIT 272
++ +MK G + T+ ++ + + + L+++AE +EL + D S Y ++
Sbjct: 1019 LSLMHKMKSLG-LEPKRDTYRSMIAAFSKQQLYDQAEELFEELRSNGYKLDRSFYHLMMK 1077
Query: 273 LYGQTGNLSEVYRIWRSLRLAF--PNTANISYLNMIQVLVNLKDLP-GAEKCFKEWESGC 329
+Y +G+ + + ++ A PNTA ++++ V P A++ K +
Sbjct: 1078 MYRTSGDHQKAENLLEIMKEAGIEPNTAT---MHLLMVSYGKSGQPEEADRILKNLRTMG 1134
Query: 330 ATYDIRVTNVMIGAYAKEGR----LENAEELKERARRRGADPNAKTWEIF 375
A D + +I AY K+G +E E+KE A +P+ + W F
Sbjct: 1135 AVLDTLPYSSVIDAYLKKGDAKAGIEKLTEMKEAA----IEPDHRIWTCF 1180
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 71/405 (17%), Positives = 151/405 (37%), Gaps = 46/405 (11%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
T ++ Y SL++ K + A L M+ + S + S++++Y + G PE
Sbjct: 713 TFRSCTMYESLIHECTKSEQFDIASQLFSDMRFNGVEPSECLYQSMVSVYCRIGFPETAQ 772
Query: 179 AIIQEMKASSIMPDSYTYNVW--MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLA 236
++ + + I+ D+ T ++ + + AE ++E +++ D ++ L
Sbjct: 773 HLLYHAEKNDIILDNVTVHIIDIIETYGKLKMWQSAESIVENLRQRCS-KMDRKVWNALI 831
Query: 237 SIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR----- 291
Y +G +E+A + + + L+ G LSE+Y + + L+
Sbjct: 832 HAYAFSGCYERARAIFNTMMREGPSPTVESVNGLLQALIVDGRLSELYVVIQELQDMDLK 891
Query: 292 ----------LAFPNTANIS--------------------YLNMIQVLVNLKDLPGAEKC 321
AF N+ Y MI +L K +
Sbjct: 892 ISKSSILLMLEAFAQAGNLFEVQKVYNGMKAAGYFPTMHLYRLMIGLLCRFKRVRDVRVM 951
Query: 322 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 381
E D+++ N ++ Y+ +N + + + G P+ +T+ Y R
Sbjct: 952 LSEMGEAGFKPDLQIFNSVLKLYSSIEEFQNMGVIYQMIQDAGLAPDEETYNTLITMYCR 1011
Query: 382 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVD 441
+ + + + K G P +T R+ + F +++ D AE E L+
Sbjct: 1012 DHRPEEGLSLMHKMKSLG------LEPKRDTYRSMIAAFSKQQLYDQAEELFEELRSNGY 1065
Query: 442 DLGVEVFEPLIRTYAAAG--RTSPVMLRRLKMEKVEVSEASKKLL 484
L + +++ Y +G + + +L +K +E + A+ LL
Sbjct: 1066 KLDRSFYHLMMKMYRTSGDHQKAENLLEIMKEAGIEPNTATMHLL 1110
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
Query: 117 PETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK 176
P T+ HL L+ Y K E+A+ +L+ ++ + ++P++S++ Y K G +
Sbjct: 1102 PNTATMHL----LMVSYGKSGQPEEADRILKNLRTMGAVLDTLPYSSVIDAYLKKGDAKA 1157
Query: 177 IPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
+ EMK ++I PD + ++RA + +++ A ++ ++ G
Sbjct: 1158 GIEKLTEMKEAAIEPDHRIWTCFIRAASLSGEVNDANNLLNALQAVG 1204
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 74/191 (38%), Gaps = 16/191 (8%)
Query: 220 KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI-------- 271
K + +A ++ + +Y G FEK + R D+ ++ LI
Sbjct: 255 KAESVIADTVQVYNAMMGVYARNGNFEKVNEMFNLMRERGCEPDIVSFNTLINAKVKSCA 314
Query: 272 TLYGQTGNL-SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCA 330
T+ G L EV + LR P+ I+Y +I +L A F ES
Sbjct: 315 TVSGLAIELLDEVGKF--GLR---PDI--ITYNTLISACSRESNLKEAIGVFSHMESNRC 367
Query: 331 TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
D+ N MI Y + G AE L E+ + G P+A T+ + + G+ + D
Sbjct: 368 QPDLWTYNAMISVYGRCGFALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRD 427
Query: 391 CLEKAIDTGRG 401
E+ + G G
Sbjct: 428 ISEEMVKMGFG 438
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/388 (21%), Positives = 167/388 (43%), Gaps = 9/388 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
AL + + M+ G+ V I +D + K Q +D A + F +D + +TY SL+
Sbjct: 428 ALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIE 487
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ ++A L E+M + N +++ + SL+ + K G E I EM P
Sbjct: 488 GLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSP 547
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D N +M + +I + +E+K G + D +++ L V+AG +A
Sbjct: 548 DLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIP-DARSYTILIHGLVKAGFAHEAYEL 606
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
++ + D AY +I + ++G +++ Y++ ++ ++Y ++I L
Sbjct: 607 FYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAK 666
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+ L A F+E +S ++ + + +I + K GR++ A + E ++G PN T
Sbjct: 667 IDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYT 726
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG 431
W D ++ ++ A+ C + D K P+ T + + + + A
Sbjct: 727 WNCLLDALVKAEEISEALVCFQSMKDL------KCTPNYITYSILIHGLCKIRKFNKAFV 780
Query: 432 FLEILKKAVDDLGVEVFEPLIRTYAAAG 459
F + ++K V + +I A AG
Sbjct: 781 FWQEMQKQGFKPNVFTYTTMISGLAKAG 808
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 183/425 (43%), Gaps = 33/425 (7%)
Query: 33 GSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSD 92
G S+ + + + F+KS+K + T++KL+ R PA N+ G T D
Sbjct: 162 GPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFR----PAFSAYTNL--IGALSTSRD 215
Query: 93 QAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKEL 152
L L ++Q + A N HL + +L+ + +E + A +LL++MK
Sbjct: 216 SDCMLTLFQQMQELGYAVNV----------HL-FTTLIRVFAREGRVDAALSLLDEMKSN 264
Query: 153 NLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA 212
+L + +N + + K G + EMKA+ ++ D TY + L + ++ A
Sbjct: 265 SLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEA 324
Query: 213 ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLIT 272
+ E M ++ +V + ++ + Y AG FE A L+ + + +Y +++
Sbjct: 325 VELFEHMDQNKQVPCAYA-YNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILS 383
Query: 273 LYGQTGNLSEVYRIWRSLRL-AFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCAT 331
G+ G + E + + ++ A PN + +Y MI +L L A +
Sbjct: 384 CLGRKGQVDEALKKFEEMKKDAIPNLS--TYNIMIDMLCKAGKLETALVVRDAMKDAGLF 441
Query: 332 YDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDC 391
++ N+M+ K RL++A + E + P+A T+ + R+G + A
Sbjct: 442 PNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKL 501
Query: 392 LEKAIDTGRGDGGKWVPSSETIRTFMRH-FEQEKDVDGAEGFLEILKKAVDDLGVEVFEP 450
E+ +D + +P++ + +R+ F+ + DG + + E+L+ LG
Sbjct: 502 YEQMLDANQ------IPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLR-----LGCSPDLL 550
Query: 451 LIRTY 455
L+ TY
Sbjct: 551 LLNTY 555
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 122/296 (41%), Gaps = 4/296 (1%)
Query: 97 LDLVAKVQGIDAAENYFV---DLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELN 153
+ ++ +++ ++ A NYF L + + Y SLL + E +LE+M
Sbjct: 101 IGVLRRLKDVNNAVNYFRWAERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAG 160
Query: 154 LGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAE 213
G S+ ++ + K+ + IQ M+ P Y + AL+ D
Sbjct: 161 FGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCML 220
Query: 214 RVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITL 273
+ ++M+ G A + F+ L ++ G + A L E+++ + D+ Y I
Sbjct: 221 TLFQQMQELG-YAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDC 279
Query: 274 YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYD 333
+G+ G + ++ + ++ +++Y +MI VL L A + F+ +
Sbjct: 280 FGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPC 339
Query: 334 IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 389
N MI Y G+ E+A L ER RR+G P+ ++ R G + A+
Sbjct: 340 AYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEAL 395
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/348 (19%), Positives = 134/348 (38%), Gaps = 41/348 (11%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK--NHLTYGSLLN 131
AL L + M+ + V + +D K +D A F ++ + +TY S++
Sbjct: 254 ALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIG 313
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK +A L E M + + +N+++ Y G E ++++ + +P
Sbjct: 314 VLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIP 373
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRD------------------GRVAA------ 227
+YN + L + A + EEMK+D G++
Sbjct: 374 SVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLETALVVRD 433
Query: 228 ---DWTTFSNLASIYVEAGLFEKAER------ALKELENRNAHRDLSAYQFLITLYGQTG 278
D F N+ ++ + KA+R + L+++ D Y LI G+ G
Sbjct: 434 AMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHG 493
Query: 279 NLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIR 335
+ E Y+++ + A PN + Y ++I+ K + E GC+ D+
Sbjct: 494 RVDEAYKLYEQMLDANQIPNA--VVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSP-DLL 550
Query: 336 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
+ N + K G +E L + + G P+A+++ I ++ G
Sbjct: 551 LLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAG 598
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 118/254 (46%), Gaps = 10/254 (3%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TYGS+++ K ++A L E+ K + + + ++SL+ + K G ++ I++E
Sbjct: 655 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEE 714
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
+ + P+ YT+N + AL +IS A + MK D + ++ T+S L +
Sbjct: 715 LMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMK-DLKCTPNYITYSILIHGLCKIR 773
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
F KA +E++ + ++ Y +I+ + GN+ E ++ + + Y
Sbjct: 774 KFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYN 833
Query: 304 NMIQVLVNLKDLPGAEKCFKEWE-SGCATYDIRVTNVMIGAYAKEGRLENA----EELKE 358
+I+ L N A + F+E GC+ Y + V++ + K +E A L+E
Sbjct: 834 AIIEGLSNANRASDAYRLFEEARLKGCSIY-TKTCVVLLDSLHKAECIEQAAIVGAVLRE 892
Query: 359 RARRRGADPNAKTW 372
A+ + A A++W
Sbjct: 893 TAKAQHA---ARSW 903
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 69/152 (45%), Gaps = 2/152 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A + E + ++G+ V LD + K + I A F + + + N++TY L++
Sbjct: 708 AYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIH 767
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK KA ++M++ + + ++++ AK G+ + + ++ K +
Sbjct: 768 GLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVA 827
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
DS YN + L+ N S A R+ EE + G
Sbjct: 828 DSAIYNAIIEGLSNANRASDAYRLFEEARLKG 859
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 2/155 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A L E + +G+ V + +D KV ID A +L + + N T+ LL+
Sbjct: 673 AYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLD 732
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
K +A + MK+L + + ++ L+ K K QEM+ P
Sbjct: 733 ALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKP 792
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA 226
+ +TY + LA +I A+ + E+ K G VA
Sbjct: 793 NVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVA 827
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/388 (21%), Positives = 167/388 (43%), Gaps = 9/388 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
AL + + M+ G+ V I +D + K Q +D A + F +D + +TY SL+
Sbjct: 428 ALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIE 487
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ ++A L E+M + N +++ + SL+ + K G E I EM P
Sbjct: 488 GLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSP 547
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D N +M + +I + +E+K G + D +++ L V+AG +A
Sbjct: 548 DLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIP-DARSYTILIHGLVKAGFAHEAYEL 606
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
++ + D AY +I + ++G +++ Y++ ++ ++Y ++I L
Sbjct: 607 FYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAK 666
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+ L A F+E +S ++ + + +I + K GR++ A + E ++G PN T
Sbjct: 667 IDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYT 726
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG 431
W D ++ ++ A+ C + D K P+ T + + + + A
Sbjct: 727 WNCLLDALVKAEEISEALVCFQSMKDL------KCTPNYITYSILIHGLCKIRKFNKAFV 780
Query: 432 FLEILKKAVDDLGVEVFEPLIRTYAAAG 459
F + ++K V + +I A AG
Sbjct: 781 FWQEMQKQGFKPNVFTYTTMISGLAKAG 808
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 183/425 (43%), Gaps = 33/425 (7%)
Query: 33 GSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSD 92
G S+ + + + F+KS+K + T++KL+ R PA N+ G T D
Sbjct: 162 GPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFR----PAFSAYTNL--IGALSTSRD 215
Query: 93 QAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKEL 152
L L ++Q + A N HL + +L+ + +E + A +LL++MK
Sbjct: 216 SDCMLTLFQQMQELGYAVNV----------HL-FTTLIRVFAREGRVDAALSLLDEMKSN 264
Query: 153 NLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA 212
+L + +N + + K G + EMKA+ ++ D TY + L + ++ A
Sbjct: 265 SLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEA 324
Query: 213 ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLIT 272
+ E M ++ +V + ++ + Y AG FE A L+ + + +Y +++
Sbjct: 325 VELFEHMDQNKQVPCAYA-YNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILS 383
Query: 273 LYGQTGNLSEVYRIWRSLRL-AFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCAT 331
G+ G + E + + ++ A PN + +Y MI +L L A +
Sbjct: 384 CLGRKGQVDEALKKFEEMKKDAIPNLS--TYNIMIDMLCKAGKLETALVVRDAMKDAGLF 441
Query: 332 YDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDC 391
++ N+M+ K RL++A + E + P+A T+ + R+G + A
Sbjct: 442 PNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKL 501
Query: 392 LEKAIDTGRGDGGKWVPSSETIRTFMRH-FEQEKDVDGAEGFLEILKKAVDDLGVEVFEP 450
E+ +D + +P++ + +R+ F+ + DG + + E+L+ LG
Sbjct: 502 YEQMLDANQ------IPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLR-----LGCSPDLL 550
Query: 451 LIRTY 455
L+ TY
Sbjct: 551 LLNTY 555
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 122/296 (41%), Gaps = 4/296 (1%)
Query: 97 LDLVAKVQGIDAAENYFV---DLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELN 153
+ ++ +++ ++ A NYF L + + Y SLL + E +LE+M
Sbjct: 101 IGVLRRLKDVNNAVNYFRWAERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAG 160
Query: 154 LGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAE 213
G S+ ++ + K+ + IQ M+ P Y + AL+ D
Sbjct: 161 FGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCML 220
Query: 214 RVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITL 273
+ ++M+ G A + F+ L ++ G + A L E+++ + D+ Y I
Sbjct: 221 TLFQQMQELG-YAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDC 279
Query: 274 YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYD 333
+G+ G + ++ + ++ +++Y +MI VL L A + F+ +
Sbjct: 280 FGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPC 339
Query: 334 IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 389
N MI Y G+ E+A L ER RR+G P+ ++ R G + A+
Sbjct: 340 AYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEAL 395
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/348 (19%), Positives = 135/348 (38%), Gaps = 41/348 (11%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK--NHLTYGSLLN 131
AL L + M+ + V + +D K +D A +F ++ + +TY S++
Sbjct: 254 ALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIG 313
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK +A L E M + + +N+++ Y G E ++++ + +P
Sbjct: 314 VLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIP 373
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRD------------------GRVAA------ 227
+YN + L + A + EEMK+D G++
Sbjct: 374 SVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLETALVVRD 433
Query: 228 ---DWTTFSNLASIYVEAGLFEKAER------ALKELENRNAHRDLSAYQFLITLYGQTG 278
D F N+ ++ + KA+R + L+++ D Y LI G+ G
Sbjct: 434 AMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHG 493
Query: 279 NLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIR 335
+ E Y+++ + A PN + Y ++I+ K + E GC+ D+
Sbjct: 494 RVDEAYKLYEQMLDANQIPNA--VVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSP-DLL 550
Query: 336 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
+ N + K G +E L + + G P+A+++ I ++ G
Sbjct: 551 LLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAG 598
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 118/254 (46%), Gaps = 10/254 (3%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TYGS+++ K ++A L E+ K + + + ++SL+ + K G ++ I++E
Sbjct: 655 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEE 714
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
+ + P+ YT+N + AL +IS A + MK D + ++ T+S L +
Sbjct: 715 LMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMK-DLKCTPNYITYSILIHGLCKIR 773
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
F KA +E++ + ++ Y +I+ + GN+ E ++ + + Y
Sbjct: 774 KFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYN 833
Query: 304 NMIQVLVNLKDLPGAEKCFKEWE-SGCATYDIRVTNVMIGAYAKEGRLENA----EELKE 358
+I+ L N A + F+E GC+ Y + V++ + K +E A L+E
Sbjct: 834 AIIEGLSNANRASDAYRLFEEARLKGCSIY-TKTCVVLLDSLHKAECIEQAAIVGAVLRE 892
Query: 359 RARRRGADPNAKTW 372
A+ + A A++W
Sbjct: 893 TAKAQHA---ARSW 903
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 69/152 (45%), Gaps = 2/152 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A + E + ++G+ V LD + K + I A F + + + N++TY L++
Sbjct: 708 AYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIH 767
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK KA ++M++ + + ++++ AK G+ + + ++ K +
Sbjct: 768 GLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVA 827
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
DS YN + L+ N S A R+ EE + G
Sbjct: 828 DSAIYNAIIEGLSNANRASDAYRLFEEARLKG 859
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 2/155 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A L E + +G+ V + +D KV ID A +L + + N T+ LL+
Sbjct: 673 AYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLD 732
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
K +A + MK+L + + ++ L+ K K QEM+ P
Sbjct: 733 ALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKP 792
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA 226
+ +TY + LA +I A+ + E+ K G VA
Sbjct: 793 NVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVA 827
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 130/325 (40%), Gaps = 46/325 (14%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY +L+ +C+ ++AE L++ M+E L + + FNS++ K G E +
Sbjct: 191 NAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVF 250
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EM + PD +YN + V A V EM R G + D TF++L + +
Sbjct: 251 DEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKG-IMPDVVTFTSLIHVMCK 309
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
AG E+A ++E+ R + + LI + + G L + R +R + +
Sbjct: 310 AGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVC 369
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y N +I Y GR++ A EL
Sbjct: 370 Y-----------------------------------NALINGYCMVGRMDEARELVREME 394
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
+G P+ T+ Y +NGD A ++ ++ G +P + T + +R
Sbjct: 395 AKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENG------VLPDAITYSSLIRVLC 448
Query: 422 QEKDVDGAEGFLEILKKAVDDLGVE 446
+EK + A +L K + LG++
Sbjct: 449 EEKRLGDA----HVLFKNMISLGLQ 469
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 120/263 (45%), Gaps = 18/263 (6%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY SL+ C+E A L + M L L + + SL+ + K G+ E+ ++ E
Sbjct: 438 ITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDE 497
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAAD--------WTTFSNL 235
M + ++PD TY+V + L+ A+R++ ++ + V A+ + L
Sbjct: 498 MVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAEL 557
Query: 236 ASI------YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS 289
S+ + GL +A++ + + +RN + D S Y LI + + GN+ + +
Sbjct: 558 KSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQ 617
Query: 290 -LRLAF-PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKE 347
L+ F PN+ S +++I+ L + A++ ++ + C+ D + +I KE
Sbjct: 618 MLQCGFAPNST--STISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKE 675
Query: 348 GRLENAEELKERARRRGADPNAK 370
G ++ ++ R G P+ +
Sbjct: 676 GNVDAVLDVLHGMARDGLLPSPR 698
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 10/155 (6%)
Query: 308 VLVNLKD--LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
VL+ L D LP A + F S ++ N+++ A G + A + R G
Sbjct: 129 VLLALSDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGC 188
Query: 366 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKD 425
DPNA T+ + R G+ VD E+ +D R G K P+ T + + +
Sbjct: 189 DPNAVTYNTLVAAFCRAGE----VDRAERLVDMMREGGLK--PNLVTFNSVVNGICKAGR 242
Query: 426 V-DGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
+ D + F E++K+ + GV + L+ Y G
Sbjct: 243 MEDARKVFDEMVKEGLAPDGVS-YNTLVGGYCKVG 276
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 137/314 (43%), Gaps = 5/314 (1%)
Query: 65 LRDRKLYYPALKLSENMEK-RGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL--PETSK 121
L + ++ AL+ M++ R KT S + L A++ D + +F D+ +
Sbjct: 73 LIEEDMFEEALQCFSKMKRCRVFPKTRSCNGL-LHKFARLGKTDGMKRFFKDMIGAGSKP 131
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
TY +++C CKE E A L E+MK L ++ +NS++ Y K G +
Sbjct: 132 TVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFF 191
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+EMK+ S PD TYN + + EMK+ G + + ++S L + +
Sbjct: 192 EEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSG-LKPNVVSYSTLVDAFCK 250
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
+ ++A + ++ + Y L+ Y + GNLS+ +R+ + ++
Sbjct: 251 EDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVT 310
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I L +++ + AE+ F + + ++ +I + K ++ A EL + +
Sbjct: 311 YTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMK 370
Query: 362 RRGADPNAKTWEIF 375
RG P+ + F
Sbjct: 371 GRGIKPDLLLYGTF 384
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/313 (20%), Positives = 129/313 (41%), Gaps = 7/313 (2%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
+ +L + +E M E+A KMK + + N L+ +A+ G + + ++M
Sbjct: 65 VFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDM 124
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ P +TYN+ + + DI A + EEMK G + D T++++ Y + G
Sbjct: 125 IGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLI-PDTVTYNSMIDGYGKVGR 183
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+ +E+++ + D+ Y LI + + G L + +R ++ + +SY
Sbjct: 184 LDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYST 243
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
++ + A K + + + ++ AY K G L +A L + + G
Sbjct: 244 LVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVG 303
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 424
+ N T+ D +K A + K + G +P+ + + F + K
Sbjct: 304 VEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAG------VIPNLASYTALIHGFVKAK 357
Query: 425 DVDGAEGFLEILK 437
++D A L+ +K
Sbjct: 358 NMDRALELLDEMK 370
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 127/309 (41%), Gaps = 14/309 (4%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK-----NHLTYGS 128
ALK +M + G+ V ++ + LV I + F E S+ N +TY +
Sbjct: 257 ALKFYVDMRRLGL---VPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTA 313
Query: 129 LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS 188
L++ C ++AE L KM + + + +L+ + K + ++ ++ EMK
Sbjct: 314 LIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRG 373
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
I PD Y ++ +L + I A+ V+ EM+ G + A+ ++ L Y ++ +
Sbjct: 374 IKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKG-IKANTFIYTTLMDAYFKSE--NPS 430
Query: 249 ERALKELENRNAHRDLSAYQFLITLYGQTGN--LSEVYRIWRSLRLAFPNTANIS-YLNM 305
E E +++A F + + G N +S+ + + F AN + Y M
Sbjct: 431 EGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAM 490
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
I L + A F++ D +I K+G + A L+++ G
Sbjct: 491 IDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIGV 550
Query: 366 DPNAKTWEI 374
+ A+ ++
Sbjct: 551 ESGARFGDL 559
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 124/276 (44%), Gaps = 1/276 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+T+ L++ +CKE +A+ +L+ M E+ + + + +NSLM Y+ + +
Sbjct: 302 VTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDV 361
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M PD ++Y++ + V I A+++ EM G + + +++ L + + G
Sbjct: 362 MITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQG-LTPNTVSYTTLIHAFCQLG 420
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
+A K++ DL Y L+ + + G L + +R++R+++ + + Y
Sbjct: 421 KLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYT 480
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I + +L A K F E D+++ +I KEG L+ A E +
Sbjct: 481 ILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEED 540
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
G PN ++ + +L++ D AV + + D G
Sbjct: 541 GCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKG 576
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 126/309 (40%), Gaps = 38/309 (12%)
Query: 114 VDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGH 173
++L S N T L+NC+C + ++L K+ +L L + + F +L+ K G
Sbjct: 117 MELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGE 176
Query: 174 PEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFS 233
+ + +M A PD YTY + L + + + A +I++M G D T+S
Sbjct: 177 FAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVG-CQPDVVTYS 235
Query: 234 NLAS---------------IYVEA---------------GL-----FEKAERALKELENR 258
L Y++A GL +++A L E+ +
Sbjct: 236 TLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSL 295
Query: 259 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 318
N D+ + LI ++ + GN+ E + +++ I+Y +++ ++ A
Sbjct: 296 NIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEA 355
Query: 319 EKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 377
K F + GC D+ +++I Y R++ A++L +G PN ++
Sbjct: 356 RKLFDVMITRGCKP-DVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIH 414
Query: 378 YYLRNGDMK 386
+ + G ++
Sbjct: 415 AFCQLGKLR 423
>gi|326507498|dbj|BAK03142.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1043
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 112/234 (47%), Gaps = 6/234 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
NH TY ++ + KE + E++ +L KM+ L ++SL++L A+ G E +
Sbjct: 281 NHFTYTVVIGSFVKEGLLEESMQVLGKMRMSRLVPEEATYSSLISLSARHGRGEHAVMLY 340
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+EM+A I+P +YT + D S A + EM+R RV D + L IY +
Sbjct: 341 EEMRAHGIVPSNYTCASLLALYDKSEDYSKALSLFSEMERS-RVVIDEVIYGILIRIYGK 399
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
GL++ A+R +E++N D Y + ++ GN + S+R + S
Sbjct: 400 IGLYDDAQRTFEEIDNAGLLSDEQTYVAMAQVHMNAGNYDRALLVMGSMRSRNVTPSLFS 459
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGC--ATYDIRVTNVMIGAYAKEGRLENA 353
Y ++++ V ++D+ AE+ F+ C D+ N ++ Y K G+LE A
Sbjct: 460 YSSLLRCHVVMEDIAAAEEAFRAL---CKYGLPDVFCCNDLLRLYFKLGQLEKA 510
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 1/166 (0%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y ++LN Y K + A L +MKE + + FNS++ YA +G + + QEM
Sbjct: 824 YTNMLNFYGKAGRHQDASLLFNRMKEQGIMPGKISFNSMINAYATSGLHDDAEIVFQEMH 883
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
+ +PDS TY +RA + S AE I+ M G + FS+L ++ G
Sbjct: 884 SHGQVPDSMTYLALIRAYSESRCYSKAEETIQNMLGSG-ITPSCPHFSHLIFAFLTEGQI 942
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 291
++A+R +++ DL+ + ++ Y + G + E ++ + R
Sbjct: 943 DEAQRICSQMQEIGVAVDLACCRAMMRAYLEHGRVEEGISLFETTR 988
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 116/310 (37%), Gaps = 2/310 (0%)
Query: 77 LSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET-SKNHLTYGSLLNCYCK 135
L E + + G+ S A + + Q +D AE F + K Y ++++ CK
Sbjct: 634 LHEQLTELGVKPEDSATATLIVQYGQEQKLDQAEELFESASTSFPKGGPVYNAMVDALCK 693
Query: 136 ELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYT 195
E+A L KM + + + L+T K G ++ II + D+
Sbjct: 694 CGKIEEAYHLFMKMADQGHSRDVVTISILVTHLTKHGKFQEAENIIHGCFNGEVELDTVV 753
Query: 196 YNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 255
YN +++++ + A + + M G V TF+ + S+Y G EKA
Sbjct: 754 YNTFIKSMLESGKLYSAASIYDRMIFSG-VPRSLQTFNIMISVYGLGGKLEKATEMFTAA 812
Query: 256 ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDL 315
+ D Y ++ YG+ G + ++ ++ IS+ +MI
Sbjct: 813 QELGLPIDEKLYTNMLNFYGKAGRHQDASLLFNRMKEQGIMPGKISFNSMINAYATSGLH 872
Query: 316 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 375
AE F+E S D +I AY++ AEE + G P+ +
Sbjct: 873 DDAEIVFQEMHSHGQVPDSMTYLALIRAYSESRCYSKAEETIQNMLGSGITPSCPHFSHL 932
Query: 376 SDYYLRNGDM 385
+L G +
Sbjct: 933 IFAFLTEGQI 942
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 73/373 (19%), Positives = 144/373 (38%), Gaps = 23/373 (6%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+ Y LL Y E AE +M E + ++ +L+ YA+ G + +
Sbjct: 174 VAYTILLRAYGNAGKIELAEEAFLEMLEAGVEPDAVACGTLLCAYARRGRHGDMMLFYKA 233
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIE------EMKRDGRVAADWTTFSNLAS 237
++P +N + +L + + G +VI EM+ V + T++ +
Sbjct: 234 TCRRGVVPPMSAFNFMLSSLQK-HRLHG--KVIHLWKHMMEMEEANNVVPNHFTYTVVIG 290
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
+V+ GL E++ + L ++ + + Y LI+L + G ++ +R
Sbjct: 291 SFVKEGLLEESMQVLGKMRMSRLVPEEATYSSLISLSARHGRGEHAVMLYEEMRAHGIVP 350
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
+N + +++ + +D A F E E D + ++I Y K G ++A+
Sbjct: 351 SNYTCASLLALYDKSEDYSKALSLFSEMERSRVVIDEVIYGILIRIYGKIGLYDDAQRTF 410
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 417
E G + +T+ + ++ G+ A+ + G PS + + +
Sbjct: 411 EEIDNAGLLSDEQTYVAMAQVHMNAGNYDRAL------LVMGSMRSRNVTPSLFSYSSLL 464
Query: 418 R-HFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEV 476
R H E E F + K + D V L+R Y G+ L M K ++
Sbjct: 465 RCHVVMEDIAAAEEAFRALCKYGLPD--VFCCNDLLRLYFKLGQLEKASAFILNMRKEDI 522
Query: 477 SEASKKLLEAICV 489
+L EA+C+
Sbjct: 523 -----QLDEALCM 530
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 93/438 (21%), Positives = 159/438 (36%), Gaps = 57/438 (13%)
Query: 71 YYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF-----VDLPETSKNHLT 125
Y AL + +M R + ++ + L ++ I AAE F LP+
Sbjct: 438 YDRALLVMGSMRSRNVTPSLFSYSSLLRCHVVMEDIAAAEEAFRALCKYGLPDV----FC 493
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
LL Y K EKA A + M++ ++ ++M + K+G I++EM
Sbjct: 494 CNDLLRLYFKLGQLEKASAFILNMRKEDIQLDEALCMTVMEVCCKSGMIADADKILKEMN 553
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY------ 239
+ S T V M + A N S V++E + A T S L +
Sbjct: 554 NGGVTMKSSTM-VSMIEMYARNRTS----VMQEQDTSPKALAYRTDSSALNATLKSLLDT 608
Query: 240 -----VEAGLFEKAERALKELENRNAHRDL---------SAYQFLITLYGQTGNLSEVYR 285
+ L K R + H L SA LI YGQ L +
Sbjct: 609 PGGSSIACQLIRKFAREGSACVAKFLHEQLTELGVKPEDSATATLIVQYGQEQKLDQAEE 668
Query: 286 IWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 345
++ S +FP + Y M+ L + A F + + D+ ++++
Sbjct: 669 LFESASTSFPKGGPV-YNAMVDALCKCGKIEEAYHLFMKMADQGHSRDVVTISILVTHLT 727
Query: 346 KEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGK 405
K G+ + AE + + + + F L +G + A ++ I +G
Sbjct: 728 KHGKFQEAENIIHGCFNGEVELDTVVYNTFIKSMLESGKLYSAASIYDRMIFSG------ 781
Query: 406 WVPSSETIRTFMRHFEQEKDVDGAEGFLEI---LKKAVDDLGVEVFEPL----IRTYAAA 458
VP S ++ F V G G LE + A +LG+ + E L + Y A
Sbjct: 782 -VPRS------LQTFNIMISVYGLGGKLEKATEMFTAAQELGLPIDEKLYTNMLNFYGKA 834
Query: 459 GRT--SPVMLRRLKMEKV 474
GR + ++ R+K + +
Sbjct: 835 GRHQDASLLFNRMKEQGI 852
>gi|15219974|ref|NP_173709.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806406|sp|P0C7Q9.1|PPR56_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g22960, mitochondrial; Flags: Precursor
gi|332192194|gb|AEE30315.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 718
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 147/368 (39%), Gaps = 47/368 (12%)
Query: 61 TLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS 120
LK LRD ++ A + E M + G+ TV LD K ++ + ++++ +
Sbjct: 209 VLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRN 268
Query: 121 K--NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
+ +TY L+N + K E+A M+ + FN L+ Y K G +
Sbjct: 269 IEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAW 328
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+ EM + I P + TYN+++ AL I A ++ M A D +++ L
Sbjct: 329 GVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM-----AAPDVVSYNTLMHG 383
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPN 296
Y++ G F +A +L + H + Y LI ++GNL R+ + +L FP+
Sbjct: 384 YIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPD 443
Query: 297 TANISYLNMIQVLVNLKDLPGA--------------------------------EKCFKE 324
I+Y +++ V +L A +K F+
Sbjct: 444 V--ITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRL 501
Query: 325 WESGCAT----YDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 380
E AT D+ + NV I K G L A E + + R G P+ T+ YL
Sbjct: 502 HEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYL 561
Query: 381 RNGDMKLA 388
NG K+A
Sbjct: 562 ENGQFKMA 569
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 130/303 (42%), Gaps = 4/303 (1%)
Query: 70 LYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSL 129
L+ A +++ M G+ T S I++ + ID A + + + ++Y +L
Sbjct: 323 LFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM--AAPDVVSYNTL 380
Query: 130 LNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
++ Y K +A L + ++ ++ S + +N+L+ ++G+ E + +EM I
Sbjct: 381 MHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLI 440
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
PD TY ++ ++S A V +EM R G + D ++ A + G +KA
Sbjct: 441 FPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKG-IKPDGYAYTTRAVGELRLGDSDKAF 499
Query: 250 RALKELENRNAHR-DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQV 308
R +E+ + H DL+ Y I + GNL + R + +++Y +I+
Sbjct: 500 RLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRG 559
Query: 309 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 368
+ A + E + V+I +AK GRLE A + ++RG PN
Sbjct: 560 YLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPN 619
Query: 369 AKT 371
T
Sbjct: 620 VMT 622
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+H+TY +++ Y + + A L ++M L S + + L+ +AK G E+
Sbjct: 549 DHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYS 608
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EMK + P+ T+N + + +I A R + +M+ +G + + +++ L S +
Sbjct: 609 TEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEG-IPPNKYSYTMLISKNCD 667
Query: 242 AGLFEKAERALK 253
FEK E +K
Sbjct: 668 ---FEKWEEVVK 676
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 147/337 (43%), Gaps = 13/337 (3%)
Query: 70 LYYPALKLSENMEKRGMNKTVSDQAIHLDLV---AKVQGIDAAENYFVDLPETS--KNHL 124
+ + AL +N+ +G + DQ + L+ +K I AA + ++ ++S N +
Sbjct: 140 MIFKALDFCQNLLAQGY---LFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLV 196
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
Y +L++ CK+ A L ++ E + ++ +NSL+ G +++ ++ +M
Sbjct: 197 MYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKM 256
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
++ PD YT+N+ + AL I A+ V+ M + G D T++ L Y
Sbjct: 257 VRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGE-KPDIVTYNALMEGYCSREN 315
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISY 302
+A + R D+ Y LI Y +T + E +++ L + P A SY
Sbjct: 316 VHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIA--SY 373
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
++I L N + +K E D+ N++I A KEGR+ A + +
Sbjct: 374 NSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMK 433
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+G PN T+ D Y ++ +A D + + +G
Sbjct: 434 KGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSG 470
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 135/343 (39%), Gaps = 45/343 (13%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
L Y L++ YCK M ++A L +++ NL + +NSL+ +G + ++ E
Sbjct: 336 LNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDE 395
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M S+ PD TYN+ + AL I A V+ M + G V + T++ + Y
Sbjct: 396 MHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKG-VKPNIVTYNAMMDGYCLRN 454
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTANIS 301
A+ + D+ Y LI Y +T + E +++ +R P+ A S
Sbjct: 455 NVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIA--S 512
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAK--------------- 346
Y ++I L NL +P ++ E + D+ N+++ A+ K
Sbjct: 513 YNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV 572
Query: 347 EG-------------------RLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKL 387
EG +L+ AE+ + G PN +T+ I + ++G
Sbjct: 573 EGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGE 632
Query: 388 AVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 430
A+ L K D R P + T + Q + D AE
Sbjct: 633 AMLLLSKMEDNDRP------PDAITFEIIIGVLLQRNETDKAE 669
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/353 (19%), Positives = 137/353 (38%), Gaps = 43/353 (12%)
Query: 68 RKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHL--- 124
R+ + A +L M KRG+ V + + +D K + +D A F +L +KN +
Sbjct: 313 RENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKEL--CNKNLVPTI 370
Query: 125 -TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+Y SL++ C + LL++M + +N L+ K G + ++
Sbjct: 371 ASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVM 430
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + P+ TYN M N+++ A+ + M + G + D ++ L + Y +
Sbjct: 431 MMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSG-LEPDILNYNVLINGYCKTE 489
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
+ ++A KE+ ++N D+++Y LI G + V + + + + I+Y
Sbjct: 490 MVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYN 549
Query: 304 NMIQVLVNLKDLPGAEKCFKE-----WES------------------------------G 328
++ + A F++ W G
Sbjct: 550 ILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHG 609
Query: 329 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 381
C+ +++ ++I A K+G A L + P+A T+EI L+
Sbjct: 610 CSP-NVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQ 661
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 98/257 (38%), Gaps = 1/257 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
T+ L+NCY + T A +LL + + + + FN+++ + G K Q +
Sbjct: 92 TFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNL 151
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
A + D +TY + L+ I A +++EM++ V + +S L + G
Sbjct: 152 LAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSS-VQPNLVMYSALIDGLCKDGF 210
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
A ++ R D Y LI G EV ++ + + + ++
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+I L + A+ DI N ++ Y + A EL R +RG
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330
Query: 365 ADPNAKTWEIFSDYYLR 381
+P+ + + D Y +
Sbjct: 331 LEPDVLNYNVLIDGYCK 347
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 144/317 (45%), Gaps = 10/317 (3%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TYGSL++ CKE E+A L +KM E+ L +++ +N+L+ Y G E+ + EM
Sbjct: 299 TYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEM 358
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
IMP TYN+ + AL + A+ +I+EM++ G + D T++ L + Y G
Sbjct: 359 VKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKG-IIPDAITYNILINGYSRCGN 417
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+KA E+ ++ Y LI + + + E ++ + + I +
Sbjct: 418 AKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNA 477
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
M+ ++ A KE + D N ++ +EG++E A L + +RRG
Sbjct: 478 MVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRG 537
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 424
P+ ++ Y R GD+K A ++ + G + P+ T ++ + +
Sbjct: 538 IKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIG------FNPTLLTYNALIKCLCKNQ 591
Query: 425 DVDGAEGFLEILKKAVD 441
+ D AE E+LK+ V+
Sbjct: 592 EGDLAE---ELLKEMVN 605
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 137/319 (42%), Gaps = 17/319 (5%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
T+ ++N CKE +KA + M+ L + + +N+++ Y+ G+ E I+ M
Sbjct: 229 TFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAM 288
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ I PDSYTY + + + A + ++M G V + T++ L Y G
Sbjct: 289 RVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLV-PNAVTYNTLIDGYCNKGD 347
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
E+A E+ + +S Y L+ G + E + + +R I+Y
Sbjct: 348 LERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITY-- 405
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV----MIGAYAKEGRLENAEELKERA 360
+L+N G K + + + I T+V +I ++ R++ A++L E+
Sbjct: 406 --NILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKI 463
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSE-TIRTFMRH 419
+G P+ + D + NG+++ A L K +D K VP E T T M+
Sbjct: 464 LDQGVSPDVIMFNAMVDGHCANGNVERAF-MLLKEMDR------KSVPPDEVTFNTLMQG 516
Query: 420 FEQEKDVDGAEGFLEILKK 438
+E V+ A L+ +K+
Sbjct: 517 RCREGKVEEARMLLDEMKR 535
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 3/162 (1%)
Query: 123 HLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQ 182
H+TY SL+ + ++A+ L EK+ + + + FN+++ + G+ E+ +++
Sbjct: 437 HVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLK 496
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
EM S+ PD T+N M+ + A +++EMKR G + D +++ L S Y
Sbjct: 497 EMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRG-IKPDHISYNTLISGYGRR 555
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLY--GQTGNLSE 282
G + A R E+ + + L Y LI Q G+L+E
Sbjct: 556 GDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAE 597
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 3/211 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A L M +G+ T + ++++ + A++ F + + S + + + ++++
Sbjct: 421 AFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVD 480
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C E+A LL++M ++ + FN+LM + G E+ ++ EMK I P
Sbjct: 481 GHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKP 540
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D +YN + DI A RV +EM G T++ L + + AE
Sbjct: 541 DHISYNTLISGYGRRGDIKDAFRVRDEMLSIG-FNPTLLTYNALIKCLCKNQEGDLAEEL 599
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSE 282
LKE+ N+ D S Y LI G L E
Sbjct: 600 LKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 630
>gi|356575482|ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Glycine max]
Length = 576
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 117/291 (40%), Gaps = 43/291 (14%)
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
+ N TY +L+N + +E + EKAE + E+M+E L +N+LM Y++ G+P
Sbjct: 290 DCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYAYNALMEAYSRAGYPYGA 349
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
I M+ PD +YN+ + A AE V ++MKR G + + L S
Sbjct: 350 AEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVG-ITPTMKSHMVLLS 408
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
Y + G K E L ++ D ++ LYG+ G ++ + R +
Sbjct: 409 AYSKMGSVNKCEEILNQMCKSGLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVM------- 461
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
E G DI N++I Y + G +E E+L
Sbjct: 462 ----------------------------EKGSYVADISTYNILINRYGQAGFIERMEDLF 493
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL---EKAIDTG-RGDGG 404
+ +G P+ TW Y + KL + CL E+ ID G DGG
Sbjct: 494 QLLPSKGLKPDVVTWTSRIGAYSKK---KLYLKCLEIFEEMIDDGCYPDGG 541
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 152/360 (42%), Gaps = 28/360 (7%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY L+ YC + EKAEA+ +M+ L S++ +N+ + K G+ +K I + M
Sbjct: 192 TYALLIKAYCISGLLEKAEAVFAEMRNYGLPSSAVVYNAYINGLMKGGNSDKAEEIFKRM 251
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
K + P + TY + + A ++ EM + T++ L + + GL
Sbjct: 252 KKDACKPTTETYTMLINLYGKAGKSFMALKLFHEMMSHD-CKPNICTYTALVNAFAREGL 310
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTG---NLSEVYRIWRSLRLAFPNTANIS 301
EKAE ++++ D+ AY L+ Y + G +E++ + + + P+ A+ +
Sbjct: 311 CEKAEEVFEQMQEAGLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCE-PDRASYN 369
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
L +D AE FK+ + T ++ V++ AY+K G + EE+ +
Sbjct: 370 ILVDAYGKAGFQD--DAEAVFKDMKRVGITPTMKSHMVLLSAYSKMGSVNKCEEILNQMC 427
Query: 362 RRGADPNAKTWEIFSDYYLRNGD---MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 418
+ G + + Y R G M+ + +EK G +V T +
Sbjct: 428 KSGLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEK---------GSYVADISTYNILIN 478
Query: 419 HFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSE 478
+ G GF+E ++ L + +P + T+ + R ++L ++ +E+ E
Sbjct: 479 RY-------GQAGFIERMEDLFQLLPSKGLKPDVVTWTS--RIGAYSKKKLYLKCLEIFE 529
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/336 (18%), Positives = 139/336 (41%), Gaps = 7/336 (2%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+ Y L+ + ++L+ ++AE+ ++ E + + L+ Y +G EK A+ E
Sbjct: 156 ICYNLLIEAFGQKLLYKEAESTYLQLLEARCIPTEDTYALLIKAYCISGLLEKAEAVFAE 215
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ + + YN ++ L + AE + + MK+D T++ L ++Y +AG
Sbjct: 216 MRNYGLPSSAVVYNAYINGLMKGGNSDKAEEIFKRMKKDA-CKPTTETYTMLINLYGKAG 274
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
A + E+ + + ++ Y L+ + + G + ++ ++ A +Y
Sbjct: 275 KSFMALKLFHEMMSHDCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYAYN 334
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+++ GA + F + D N+++ AY K G ++AE + + +R
Sbjct: 335 ALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRV 394
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQE 423
G P K+ + Y + G + + L + +G + S + + F +
Sbjct: 395 GITPTMKSHMVLLSAYSKMGSVNKCEEILNQMCKSGLKLDTYVLNSMLNLYGRLGQFGKM 454
Query: 424 KDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
++V L +++K + + LI Y AG
Sbjct: 455 EEV------LRVMEKGSYVADISTYNILINRYGQAG 484
>gi|218192142|gb|EEC74569.1| hypothetical protein OsI_10130 [Oryza sativa Indica Group]
Length = 823
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 131/278 (47%), Gaps = 9/278 (3%)
Query: 107 DAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMT 166
D E Y + LP+ +LTY SL++ + EKA L KM+ L +P++ +++
Sbjct: 483 DGMERYGI-LPD----YLTYSSLIHLMSTAKLPEKALYYLRKMQAAKLLIDCVPYSVVIS 537
Query: 167 LYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA 226
+AK G+ + + +EM S I D+Y Y++ + A A V D+ AE +K+ G +
Sbjct: 538 CFAKNGNLHMVDCLFREMITSGIQADTYVYSILIDAYAEVGDVQKAEAYFGLLKKAG-LC 596
Query: 227 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
T +++L +Y + +A++ K L++ NA +L A +I LY + E I
Sbjct: 597 ESATIYNSLIKLYTKVVYLAEAQKMYKLLKSLNADTNLYASNCMIDLYSDHCMVKEAREI 656
Query: 287 WRSLRLAFPNTAN-ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 345
+ +L++ AN S+ M+ + + A + KE ++ N +I Y
Sbjct: 657 FENLKVT--GKANEFSHAMMVCLYKKIARFDEAHRISKEMQASGFLTQALSYNSVIQMYV 714
Query: 346 KEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
GR+E+A ++ ++ PN T++ ++ G
Sbjct: 715 SGGRMEDALKIFQKMLASNTPPNDATFKALKIILVKRG 752
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 174/429 (40%), Gaps = 73/429 (17%)
Query: 80 NMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF----VDLPETSKNH-----LTYGSLL 130
+M KRG+ +I L + K + AE +F ++ K H TY +L+
Sbjct: 201 DMIKRGLLPDEITMSIVLQVHKKAGEYEKAELFFKRWSLESDVKMKGHPCYSLYTYNTLI 260
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
+ Y K EK +M + + + FN+++ ++ K E++ ++++ M+ +
Sbjct: 261 DTYGKAGQLEKVSDTFNQMLREGVSPNVVTFNTMIHVWGKHRRMEQVASLMRTMEEFQCL 320
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
PD+ TYN+ + +NDI AE +MK + + D + L Y G+ +A+
Sbjct: 321 PDTRTYNILISLYREINDIDVAEYYFRKMKAEN-LLPDVVSCRTLLYGYSIKGMVTEAQA 379
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPN---TANI-SYLNMI 306
LKE+ RN D + +Y G L + +R + + +ANI ++
Sbjct: 380 LLKEMYERNMVIDEYTQSAVTRMYVDAGMLEQAWRWFEKFNYQLNSECFSANIDAFGERG 439
Query: 307 QVLVNLKDLPGAEKCF-----KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
+L+ AEK F ++ S C V NVMI AY +L+ A E+ +
Sbjct: 440 HILL-------AEKAFMCCIKRKMLSTC------VCNVMIKAYGLVEKLDEACEIADGME 486
Query: 362 RRGADPNAKTWEIF------------SDYYLR-----------------------NGDMK 386
R G P+ T+ + YYLR NG++
Sbjct: 487 RYGILPDYLTYSSLIHLMSTAKLPEKALYYLRKMQAAKLLIDCVPYSVVISCFAKNGNLH 546
Query: 387 LAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVE 446
+ VDCL + + T +V S + + + DV AE + +LKKA
Sbjct: 547 M-VDCLFREMITSGIQADTYVYS-----ILIDAYAEVGDVQKAEAYFGLLKKAGLCESAT 600
Query: 447 VFEPLIRTY 455
++ LI+ Y
Sbjct: 601 IYNSLIKLY 609
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 137/341 (40%), Gaps = 34/341 (9%)
Query: 95 IHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKEL 152
I + L ++ ID AE YF + + + ++ +LL Y + M +A+ALL++M E
Sbjct: 328 ILISLYREINDIDVAEYYFRKMKAENLLPDVVSCRTLLYGYSIKGMVTEAQALLKEMYER 387
Query: 153 NLGFSSMPFNSLMTLYAKTGHPEKI--------PAIIQEMKASSI--------------- 189
N+ +++ +Y G E+ + E +++I
Sbjct: 388 NMVIDEYTQSAVTRMYVDAGMLEQAWRWFEKFNYQLNSECFSANIDAFGERGHILLAEKA 447
Query: 190 --------MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M + NV ++A V + A + + M+R G + D+ T+S+L +
Sbjct: 448 FMCCIKRKMLSTCVCNVMIKAYGLVEKLDEACEIADGMERYG-ILPDYLTYSSLIHLMST 506
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
A L EKA L++++ D Y +I+ + + GNL V ++R + +
Sbjct: 507 AKLPEKALYYLRKMQAAKLLIDCVPYSVVISCFAKNGNLHMVDCLFREMITSGIQADTYV 566
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I + D+ AE F + + N +I Y K L A+++ + +
Sbjct: 567 YSILIDAYAEVGDVQKAEAYFGLLKKAGLCESATIYNSLIKLYTKVVYLAEAQKMYKLLK 626
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGD 402
AD N D Y + +K A + E TG+ +
Sbjct: 627 SLNADTNLYASNCMIDLYSDHCMVKEAREIFENLKVTGKAN 667
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 154/324 (47%), Gaps = 10/324 (3%)
Query: 64 KLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--K 121
KL++ K+ ++ ++M KRG+ V + + + + + I AE F ++ +
Sbjct: 188 KLQNLKM---GMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVG 244
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ +TY +L++ YCK + A + E+MKE ++ + + FNSL++ K ++ +++
Sbjct: 245 SIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLL 304
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+EM+ + MPD YTY++ L +D +GA + E+ G ++T S L + +
Sbjct: 305 KEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTG-SILLNGLCK 363
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE-VYRIWRSLRLAF-PNTAN 299
G EKAE LK+ D Y + Y + G++++ + I R PN+
Sbjct: 364 QGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNS-- 421
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
I++ ++I ++K++ AE+ K+ T + N +I Y K + ++ E+
Sbjct: 422 ITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQ 481
Query: 360 ARRRGADPNAKTWEIFSDYYLRNG 383
G PN ++ + ++G
Sbjct: 482 MEEIGVKPNVVSYGSLINCLCKDG 505
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/354 (21%), Positives = 149/354 (42%), Gaps = 12/354 (3%)
Query: 79 ENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKE 136
E ME G+ +D ++ +D AE + + E + + TY +L++ Y K
Sbjct: 410 ERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKL 469
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 196
++ +LE+M+E+ + + + + SL+ K G + ++++M ++P++ Y
Sbjct: 470 CTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVY 529
Query: 197 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 256
N+ + V + A R +EM R ++ T++ L + G +AE L ++
Sbjct: 530 NMLIDGSCMVGKVKDALRFFDEMMR-SEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQIT 588
Query: 257 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR-LAFPNTANISYLNMIQVLVNLKDL 315
+ D+ Y LI+ Y GN+S+ ++ +++ L T +Y +I + + +
Sbjct: 589 SSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVR-TYHPLISG-CSKEGI 646
Query: 316 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 375
EK + E D V N MI YA+ G + A L + +G P+ T+
Sbjct: 647 ELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSL 706
Query: 376 SDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 429
+ R G + D + + P ++T ++ KD GA
Sbjct: 707 ILGHFREGKLSNIKDLVNNM------KAKELAPKADTYDILVKGHCDLKDFSGA 754
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 105/247 (42%), Gaps = 2/247 (0%)
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
E S +TY L++ CK+ +AE L ++ + +NSL++ YA G+ K
Sbjct: 556 EISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKC 615
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
+ + MK I P TY+ + + I E++ EM + + D ++ +
Sbjct: 616 LGLYETMKNLGIKPTVRTYHPLISGCSK-EGIELVEKLYNEMLQ-MNLLPDRVVYNAMIH 673
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
Y E G +KA + + ++ H D Y LI + + G LS + + +++
Sbjct: 674 CYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAP 733
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
+Y +++ +LKD GA ++E + + N + +EGRL+ + +
Sbjct: 734 KADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQVIC 793
Query: 358 ERARRRG 364
+G
Sbjct: 794 SEMNVKG 800
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 71/141 (50%), Gaps = 3/141 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
L L E M+ G+ TV + +K +GI+ E + ++ + + + + Y ++++
Sbjct: 615 CLGLYETMKNLGIKPTVRTYHPLISGCSK-EGIELVEKLYNEMLQMNLLPDRVVYNAMIH 673
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CY + T+KA +L + M + + M +NSL+ + + G I ++ MKA + P
Sbjct: 674 CYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAP 733
Query: 192 DSYTYNVWMRALAAVNDISGA 212
+ TY++ ++ + D SGA
Sbjct: 734 KADTYDILVKGHCDLKDFSGA 754
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 153/350 (43%), Gaps = 16/350 (4%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
A ++ E M R N+ +Q IH + + ID A + FV + + N TY +L+
Sbjct: 246 AFRVFEEMPNR--NEVSYNQLIHG--LCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIK 301
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C++ KA LL++M E NL + +NSL+ + GH + ++ MK ++P
Sbjct: 302 GLCRK-NVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVP 360
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D TY ++ L N + A R+ + + +G V+A+ +S L Y + G ++A
Sbjct: 361 DQRTYGCFIDFLCKSNRVEEARRLFDSLTEEG-VSANVIMYSVLIDGYCKVGKVDEAGCL 419
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW-RSLRLAFPNTANISYLNMIQVLV 310
+++ ++N + + LI GNL E ++ + +++ T ++ +I ++
Sbjct: 420 FEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTV-YTFNILIGRML 478
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
D A KC ++ S R N I Y G+++ AE++ + + G P+
Sbjct: 479 KQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDF 538
Query: 371 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 420
T+ Y + G A D L+ D PS T + ++
Sbjct: 539 TYTSLIKAYGKLGLTYSAFDVLKSMFD------ADCEPSHHTFLSLIKQL 582
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 138/332 (41%), Gaps = 36/332 (10%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A +L M++RG+ +D + K ++ A F L E S N + Y L++
Sbjct: 346 AYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLID 405
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
YCK ++A L EKM N ++ FN+L+ G+ ++ ++ +M + P
Sbjct: 406 GYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKP 465
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGR--VAADWTTFSNLASIYVEAGLFEKAE 249
YT+N+ + + D A + +++M G VA + F +Y AG ++AE
Sbjct: 466 TVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAF---IEVYCSAGKVQEAE 522
Query: 250 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 309
+ +++ D Y LI YG+ G + + +S+ A ++ ++L++I+ L
Sbjct: 523 DMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQL 582
Query: 310 V------------------NLKDLPGAE-----------KCFKEWESGCATYDIRVTNVM 340
N D+PG+ + F+E E T D + +
Sbjct: 583 FDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKL 642
Query: 341 IGAYAKEGRLENAEELKERARRRGADPNAKTW 372
I K L A +L ++ ++ G P+ +
Sbjct: 643 ISGICKVENLGIALKLLDQMQKEGISPSEMVF 674
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 155/401 (38%), Gaps = 47/401 (11%)
Query: 97 LDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNL 154
L L+A+ +D + ++ E S + T+ ++N YCK ++A+ + KM + L
Sbjct: 164 LTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGL 223
Query: 155 G-------------------------FSSMP------FNSLMTLYAKTGHPEKIPAIIQE 183
F MP +N L+ + G ++ ++
Sbjct: 224 SPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRNEVSYNQLIHGLCEAGRIDEAVSLFVR 283
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
MK P+ YTY ++ L N + A +++EM + + D T+++L + AG
Sbjct: 284 MKDDCCYPNVYTYTALIKGLCRKN-VHKAMGLLDEM-LERNLVPDLITYNSLIAGQCRAG 341
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
+ A R L ++ R D Y I ++ + E R++ SL + I Y
Sbjct: 342 HLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYS 401
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I + + A F++ S + + N +I G L+ A L ++ +
Sbjct: 402 VLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKM 461
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQE 423
G P T+ I L+ GD A CL+K + +G P + T F+ +
Sbjct: 462 GLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEK------PVARTYNAFIEVYCSA 515
Query: 424 KDVDGAEGFLEILKK---AVDDLGVEVFEPLIRTYAAAGRT 461
V AE + +K+ DD + LI+ Y G T
Sbjct: 516 GKVQEAEDMMVQMKEEGVPPDDF---TYTSLIKAYGKLGLT 553
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 156/396 (39%), Gaps = 51/396 (12%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAE-ALLEKMKELNLG----FSSM---PFNSLMTLYAKT 171
SK+ +T SL CY EL+T A L+++M +L F SM FN ++ +Y K
Sbjct: 148 SKDDITKLSL-KCY-NELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKM 205
Query: 172 GHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR---------- 221
G ++ + +M + + PD +T ++ D+ A RV EEM
Sbjct: 206 GFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRNEVSYNQLI 265
Query: 222 -----DGRVAADWTTFSNL------ASIYVEAGLF--------EKAERALKELENRNAHR 262
GR+ + F + ++Y L KA L E+ RN
Sbjct: 266 HGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKNVHKAMGLLDEMLERNLVP 325
Query: 263 DLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEK 320
DL Y LI + G+L YR+ + R P+ +Y I L + A +
Sbjct: 326 DLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQR--TYGCFIDFLCKSNRVEEARR 383
Query: 321 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 380
F + ++ + +V+I Y K G+++ A L E+ + PNA T+
Sbjct: 384 LFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLC 443
Query: 381 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 440
G++K A+ ++ + G P+ T + ++ D D A L+ + +
Sbjct: 444 SAGNLKEALSLFDQMVKMG------LKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSG 497
Query: 441 DDLGVEVFEPLIRTYAAAGRTSPV--MLRRLKMEKV 474
+ + I Y +AG+ M+ ++K E V
Sbjct: 498 EKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGV 533
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 71/353 (20%), Positives = 135/353 (38%), Gaps = 23/353 (6%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHL--TYGSLLN 131
AL L + M K G+ TV I + + K D A + + + + TY + +
Sbjct: 451 ALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIE 510
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
YC ++AE ++ +MKE + + SL+ Y K G +++ M + P
Sbjct: 511 VYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEP 570
Query: 192 DSYTYNVWMRALA---AVNDISGAERVIEEMKRDGRVAAD--WTTFSNLASIYVEAGLFE 246
+T+ ++ L V + SG E +E + G V W I +E LFE
Sbjct: 571 SHHTFLSLIKQLFDKRYVVEKSG-ETGVESVSNFGDVPGSNMWKMME--FDIVIE--LFE 625
Query: 247 KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI 306
E+E D Y+ LI+ + NL ++ ++ + + + + +I
Sbjct: 626 -------EMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVI 678
Query: 307 QVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD 366
L+ A ++ + + +I +EG E + ++ R G +
Sbjct: 679 SCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYN 738
Query: 367 PNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
+ W+I D L+ G V+ + + +G + P + +I T H
Sbjct: 739 DDEIAWKILIDGMLKQG----LVEEFSQLFEEMEKNGCNFSPRTYSILTQKLH 787
>gi|115471209|ref|NP_001059203.1| Os07g0222700 [Oryza sativa Japonica Group]
gi|34394024|dbj|BAC84055.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113610739|dbj|BAF21117.1| Os07g0222700 [Oryza sativa Japonica Group]
gi|117380751|gb|ABK34463.1| DNA-binding protein [Oryza sativa Japonica Group]
Length = 411
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 130/272 (47%), Gaps = 10/272 (3%)
Query: 120 SKNHLTYGSLL-NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
+N + Y +L+ NC + +KAE + +++K+L L + N ++ LY + P K+
Sbjct: 43 CRNEVLYETLIVNCVLAGDI-QKAEEVFKEIKDLCLRLTVTLCNQMILLYKRIA-PGKVA 100
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+++ M+ ++ P ++TY + + ND++G E V+ EMK G + +T + +A
Sbjct: 101 SVLMLMEKENVKPSAFTYRLLIDLKGRSNDLAGIEVVLNEMKAYG-IEPSTSTQTMVARF 159
Query: 239 YVEAGLFEKAERALKELENR--NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPN 296
Y+ GL EKAE +KE+E + N+ + L+ LY ++V RIW
Sbjct: 160 YIHGGLTEKAEAVVKEMEAQLSNSKDGRHVIKSLLHLYAALNKPNDVARIWEMCTEPMLE 219
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
+L+ I+ L + AE+ F+ + + N M+ YA+ L ++
Sbjct: 220 ----DFLSAIKAWGELGLIEKAEETFEAMANAPEKLSSKYYNAMLNVYAQNKLLSKGKQF 275
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDMKLA 388
ER R G TW+ + Y+ +G+++ A
Sbjct: 276 VERMCRDGCPNGPLTWDALINLYVNSGEVEKA 307
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 144/317 (45%), Gaps = 10/317 (3%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TYGSL++ CKE E+A L +KM E+ L +++ +N+L+ Y G E+ + EM
Sbjct: 321 TYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEM 380
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
IMP TYN+ + AL + A+ +I+EM++ G + D T++ L + Y G
Sbjct: 381 VKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKG-IIPDAITYNILINGYSRCGN 439
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+KA E+ ++ Y LI + + + E ++ + + I +
Sbjct: 440 AKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNA 499
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
M+ ++ A KE + D N ++ +EG++E A L + +RRG
Sbjct: 500 MVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRG 559
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 424
P+ ++ Y R GD+K A ++ + G + P+ T ++ + +
Sbjct: 560 IKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIG------FNPTLLTYNALIKCLCKNQ 613
Query: 425 DVDGAEGFLEILKKAVD 441
+ D AE E+LK+ V+
Sbjct: 614 EGDLAE---ELLKEMVN 627
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 137/319 (42%), Gaps = 17/319 (5%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
T+ ++N CKE +KA + M+ L + + +N+++ Y+ G+ E I+ M
Sbjct: 251 TFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAM 310
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ I PDSYTY + + + A + ++M G V + T++ L Y G
Sbjct: 311 RVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLV-PNAVTYNTLIDGYCNKGD 369
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
E+A E+ + +S Y L+ G + E + + +R I+Y
Sbjct: 370 LERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITY-- 427
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV----MIGAYAKEGRLENAEELKERA 360
+L+N G K + + + I T+V +I ++ R++ A++L E+
Sbjct: 428 --NILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKI 485
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSE-TIRTFMRH 419
+G P+ + D + NG+++ A L K +D K VP E T T M+
Sbjct: 486 LDQGVSPDVIMFNAMVDGHCANGNVERAF-MLLKEMDR------KSVPPDEVTFNTLMQG 538
Query: 420 FEQEKDVDGAEGFLEILKK 438
+E V+ A L+ +K+
Sbjct: 539 RCREGKVEEARMLLDEMKR 557
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 3/162 (1%)
Query: 123 HLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQ 182
H+TY SL+ + ++A+ L EK+ + + + FN+++ + G+ E+ +++
Sbjct: 459 HVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLK 518
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
EM S+ PD T+N M+ + A +++EMKR G + D +++ L S Y
Sbjct: 519 EMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRG-IKPDHISYNTLISGYGRR 577
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLY--GQTGNLSE 282
G + A R E+ + + L Y LI Q G+L+E
Sbjct: 578 GDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAE 619
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 3/211 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A L M +G+ T + ++++ + A++ F + + S + + + ++++
Sbjct: 443 AFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVD 502
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C E+A LL++M ++ + FN+LM + G E+ ++ EMK I P
Sbjct: 503 GHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKP 562
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D +YN + DI A RV +EM G T++ L + + AE
Sbjct: 563 DHISYNTLISGYGRRGDIKDAFRVRDEMLSIG-FNPTLLTYNALIKCLCKNQEGDLAEEL 621
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSE 282
LKE+ N+ D S Y LI G L E
Sbjct: 622 LKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 652
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 152/358 (42%), Gaps = 10/358 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A +L E M +G V +I + + K+ +A ++ E + N +TY +LL+
Sbjct: 332 ATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLH 391
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C+ M + A A+L++M +S +N ++ K G ++ ++QEMK+ P
Sbjct: 392 SFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKP 451
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D TYN + L + + AE + + +G V A+ T++ L + G +++ R
Sbjct: 452 DICTYNTMIYHLCNNDLMEEAEHIFRNLIEEG-VVANGITYNTLIHALLRNGRWQEGLRL 510
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
E+ D+ +Y LI + GN+ + + N SY +I L
Sbjct: 511 ASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCK 570
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+ A + KE + T DI N +I K G A L E+ P+ T
Sbjct: 571 AGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVT 630
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF-EQEKDVDG 428
+ I ++ + + A L+KAI G VP+ T +++F Q +++G
Sbjct: 631 YNILISWHCKVRLLDDAAMLLDKAIS------GGIVPNERTWGMMVQNFVRQTVNLEG 682
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 117/277 (42%), Gaps = 7/277 (2%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TYG LL C+ ++A A+L ++ E+N+ + N+++ G + + +
Sbjct: 283 VTYGFLLQGLCRTRQADEACAMLGRLPEVNV----VMLNTVIRGCLTEGKLARATELYEM 338
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + PD +TY++ M L + A R+++EM+ G A + T+S L + G
Sbjct: 339 MGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKG-CAPNIVTYSTLLHSFCRNG 397
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
+++ A L ++ + + Y +I + G L + R+ + ++ +Y
Sbjct: 398 MWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYN 457
Query: 304 NMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
MI L N + AE F+ E G I N +I A + GR + L
Sbjct: 458 TMIYHLCNNDLMEEAEHIFRNLIEEGVVANGI-TYNTLIHALLRNGRWQEGLRLASEMLL 516
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
G + ++ + G++ ++ LE+ + G
Sbjct: 517 HGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKG 553
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 86/206 (41%), Gaps = 7/206 (3%)
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
A+++ M +PD+ Y + AL A ++ A +++EM G AAD TF++L
Sbjct: 198 ALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMG-CAADVNTFNDLVLG 256
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
G +A R + + + + Y FL+ +T E + L P
Sbjct: 257 LCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRL----PEV- 311
Query: 299 NISYLN-MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
N+ LN +I+ + L A + ++ S D+ ++++ K GR +A +
Sbjct: 312 NVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRML 371
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNG 383
+ +G PN T+ + RNG
Sbjct: 372 DEMEEKGCAPNIVTYSTLLHSFCRNG 397
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 136/313 (43%), Gaps = 17/313 (5%)
Query: 124 LTYGSLLN--CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
++YG+++N C+CK+L A LLEKM L + + +++L+ YA G E+ ++
Sbjct: 151 VSYGAMINGLCHCKDL--SLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLL 208
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M S + PD + YN + L+ + A + E++ G + D TF Y +
Sbjct: 209 DGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRG-LKPDAVTFGAFILGYSK 267
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTAN 299
G +A + E+ + + Y LI + + GNL E I+R L P+
Sbjct: 268 TGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQT 327
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
S I L+ + A K F E + D+ + +I + K+G +E A EL +
Sbjct: 328 CSAF--IHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDE 385
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
+G PN + D ++GD++ A + + G P S T T +
Sbjct: 386 MCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKG------LEPDSVTYSTMIDG 439
Query: 420 FEQEKDVDGAEGF 432
+ + ++V AE F
Sbjct: 440 YCKSENV--AEAF 450
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 128/310 (41%), Gaps = 11/310 (3%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY L++ CK EKA +L+ M L +S F L+ Y + + + ++
Sbjct: 79 NLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELL 138
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EM+ +++P + +Y + L D+S A +++E+M G + + +S L Y
Sbjct: 139 DEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG-LKPNVVVYSTLIMGYAS 197
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE--VYRIWRSLRLAFPNTAN 299
G E+A R L + D+ Y +I+ + G + E Y + R P+
Sbjct: 198 EGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDA-- 255
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+++ I + A K F E + + V+I + K G L A +
Sbjct: 256 VTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRH 315
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
G P+ +T F L+NG ++ A+ + + G VP T + +
Sbjct: 316 LHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKG------LVPDVFTYSSLISG 369
Query: 420 FEQEKDVDGA 429
F ++ +V+ A
Sbjct: 370 FCKQGEVEKA 379
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 126/297 (42%), Gaps = 11/297 (3%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
A +L + M G+ + + ++K ++ A Y +++ + +T+G+ +
Sbjct: 204 ARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFIL 263
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTL----YAKTGHPEKIPAIIQEMKAS 187
Y K +A ++M + L MP N L T+ + K G+ + +I + + A
Sbjct: 264 GYSKTGKMTEAAKYFDEMLDHGL----MPNNPLYTVLINGHFKAGNLMEALSIFRHLHAL 319
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
++PD T + ++ L + A +V E+K G V D T+S+L S + + G EK
Sbjct: 320 GVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVP-DVFTYSSLISGFCKQGEVEK 378
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 307
A E+ + ++ Y L+ ++G++ +++ + +++Y MI
Sbjct: 379 AFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMID 438
Query: 308 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+++ A F E S V N ++ KEG +E A L ++G
Sbjct: 439 GYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG 495
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 99/223 (44%), Gaps = 10/223 (4%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF-----VDLPETSKNHLTYGS 128
ALK+ ++++G+ V D + L++ E F + L + N Y +
Sbjct: 344 ALKVFSELKEKGL---VPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNA 400
Query: 129 LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS 188
L++ CK ++A L + M E L S+ +++++ Y K+ + + ++ EM +
Sbjct: 401 LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG 460
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
+ P S+ YN + D+ A + EM + G A +F+ L Y ++ ++A
Sbjct: 461 VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG--FATTLSFNTLIDGYCKSCKIQEA 518
Query: 249 ERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 291
+ +E+ + D Y +I + + G + E +++ ++
Sbjct: 519 SQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQ 561
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 106/278 (38%), Gaps = 1/278 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N TY + C+ +A+ E+M++ L ++L+ + + G +++ I
Sbjct: 9 NTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIK 68
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M + I + TYNV + L + A +++ M G + TF L Y
Sbjct: 69 DVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLG-CKPNSRTFCLLIEGYCR 127
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
+A L E+E RN +Y +I +LS ++ + + +
Sbjct: 128 EHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVV 187
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I + + A + DI N +I +K G++E A +
Sbjct: 188 YSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQ 247
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
RG P+A T+ F Y + G M A ++ +D G
Sbjct: 248 GRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHG 285
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 101/236 (42%), Gaps = 25/236 (10%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL--PETSKNHLTYGSLLN 131
A+ L M ++G T+S + +D K I A F ++ + +H+TY ++++
Sbjct: 484 AMNLFREMLQKGFATTLSFNTL-IDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVID 542
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+CK E+A L ++M+E NL + + A+ ++M A + P
Sbjct: 543 WHCKAGKMEEANLLFKEMQERNLIVDT------------------VFALFEKMVAKGVKP 584
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D TY + + A +++ A ++ +E+ G + T L + + +A +
Sbjct: 585 DEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGML-TKGTIHDLLITALCKREDLTEASKL 643
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW---RSLRLAFPNTANISYLN 304
L E+ L+A L+ + + G + E R++ +SL L T I +N
Sbjct: 644 LDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVN 699
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 6/123 (4%)
Query: 338 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
NV+I K G++E A E+ + G PN++T+ + + Y R +M A++ L++
Sbjct: 84 NVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEM-- 141
Query: 398 TGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAA 457
+ VPS+ + + KD+ A LE + + V V+ LI YA+
Sbjct: 142 ----EKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYAS 197
Query: 458 AGR 460
GR
Sbjct: 198 EGR 200
>gi|449530353|ref|XP_004172160.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like, partial [Cucumis sativus]
Length = 312
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 116/299 (38%), Gaps = 39/299 (13%)
Query: 109 AENYFVDL--PETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMT 166
A+N F ++ N T+ +L+N +E + EKAE + E+M+E +N+LM
Sbjct: 15 AQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALME 74
Query: 167 LYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA 226
Y++ G P I M+ PD +YN+ + A A+ V EEMKR G +
Sbjct: 75 SYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIG-IT 133
Query: 227 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
+ L S Y AG K E + ++ D ++ LYG+ G ++
Sbjct: 134 PTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKM--- 190
Query: 287 WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAK 346
E F + G DI N++I Y +
Sbjct: 191 --------------------------------EDLFSTMQKGPCRADISTYNILINVYGR 218
Query: 347 EGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG-RGDGG 404
G +E EEL + + +P+ TW Y R K ++ EK ID G DGG
Sbjct: 219 AGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLELFEKMIDAGCYPDGG 277
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 137/304 (45%), Gaps = 7/304 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY L++ +CKE E+A +L++M L +++ +N L++ K + +
Sbjct: 48 NVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMF 107
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+M + PD +T+N + L VN A + ++M +G V A+ T++ L ++
Sbjct: 108 GDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEG-VIANTITYNTLIHAFLR 166
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G ++A + + ++ R D Y LI + GN+ + ++ + N NIS
Sbjct: 167 RGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNIS 226
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
+I L ++ A + ++ T DI N +I K GR + A L ++ +
Sbjct: 227 CNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQ 286
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
G P+A T+ ++ + G A L + +D+G ++P+ T + +F
Sbjct: 287 VEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSG------FIPNEVTWYILVSNFI 340
Query: 422 QEKD 425
+E D
Sbjct: 341 KEGD 344
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 100/254 (39%), Gaps = 3/254 (1%)
Query: 147 EKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV 206
E M + G +N+L+ K G+ ++ EM+ P+ TY + +
Sbjct: 3 ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKE 62
Query: 207 NDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSA 266
+ A V++EM G +A + ++ L S + + A ++ ++ D+
Sbjct: 63 GRLEEARNVLDEMSGKG-LALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFT 121
Query: 267 YQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE 326
+ LI + E +++ + L I+Y +I + + A K +
Sbjct: 122 FNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDML 181
Query: 327 -SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 385
GC DI N +I A + G +E L E +G +PN + I + R G++
Sbjct: 182 FRGCPLDDI-TYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNI 240
Query: 386 KLAVDCLEKAIDTG 399
+ A++ L I G
Sbjct: 241 QHALEFLRDMIHRG 254
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 137/304 (45%), Gaps = 7/304 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY L++ +CKE E+A +L++M L +++ +N L++ K + +
Sbjct: 441 NVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMF 500
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+M + PD +T+N + L VN A + ++M +G V A+ T++ L ++
Sbjct: 501 GDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEG-VIANTITYNTLIHAFLR 559
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G ++A + + ++ R D Y LI + GN+ + ++ + N NIS
Sbjct: 560 RGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNIS 619
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
+I L ++ A + ++ T DI N +I K GR + A L ++ +
Sbjct: 620 CNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQ 679
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
G P+A T+ ++ + G A L + +D+G ++P+ T + +F
Sbjct: 680 VEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSG------FIPNEVTWYILVSNFI 733
Query: 422 QEKD 425
+E D
Sbjct: 734 KEGD 737
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 109/277 (39%), Gaps = 43/277 (15%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
+N ++ + P+ +P + EM + I P YT+ V M+AL VN++ A ++++M
Sbjct: 203 YNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMT 262
Query: 221 RDGRVA----------------------------------ADWTTFSNLASIYVEAGLFE 246
R G V D TF++ +
Sbjct: 263 RHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIH 322
Query: 247 KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI 306
+A + + + R + Y L+ + G + E R L PN + + +I
Sbjct: 323 EAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEA----RMLLNKVPNPNVVLFNTLI 378
Query: 307 QVLVNLKDLPGAEKCFKE--WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
V+ L A+ E GC DI N +I K+G L +A EL + +G
Sbjct: 379 NGYVSRGRLDEAKAVMHESMLSVGCGP-DIFTYNTLILGLCKKGYLVSARELMNEMQIKG 437
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRG 401
+PN T+ I D + + G ++ A + L++ +G+G
Sbjct: 438 CEPNVITYTILIDRFCKEGRLEEARNVLDEM--SGKG 472
>gi|297842227|ref|XP_002888995.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
gi|297334836|gb|EFH65254.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
Length = 863
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 163/386 (42%), Gaps = 24/386 (6%)
Query: 95 IHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKEL 152
I + L+ + +D F ++P S++ +Y +L+N Y + E + LL++MK
Sbjct: 146 IMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKND 205
Query: 153 NLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISG 211
+ S + +N+++ A+ G E + + EM+ I PD TYN + A A
Sbjct: 206 KISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDE 265
Query: 212 AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 271
AE V M DG + D TT+S+L + + EK L E+ + + D+++Y L+
Sbjct: 266 AEMVFRTMN-DGGIVPDLTTYSHLVETFGKLRRLEKVSDLLSEMASGGSLPDITSYNVLL 324
Query: 272 TLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPG----AEKCFKEW 325
Y ++G++ E ++ ++ A PN N VL+NL G + F E
Sbjct: 325 EAYAKSGSIKEAMGVFHQMQAAGCTPNA------NTYSVLLNLFGQSGRYDDVRQLFLEM 378
Query: 326 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 385
+S D N++I + + G + L +P+ +T+E + G
Sbjct: 379 KSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLH 438
Query: 386 KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGV 445
+ A L+ VPSS+ + F Q + A + + + +
Sbjct: 439 EDARKILQYMT------ANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSI 492
Query: 446 EVFEPLIRTYAAAG--RTSPVMLRRL 469
E + L+ ++A G + S +L RL
Sbjct: 493 ETYHSLLYSFARGGLVKESEAILSRL 518
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 105/263 (39%), Gaps = 37/263 (14%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N Y +++ +E + +K + ++M + S + +L+ Y + G E ++
Sbjct: 140 NEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELL 199
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVN-DISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
MK I P TYN + A A D G + EM+ +G + D T++ L S
Sbjct: 200 DRMKNDKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEG-IQPDIVTYNTLLSACA 258
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
GL ++AE + + + DL+ Y L+ +G+
Sbjct: 259 IRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGK------------------------ 294
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
L+ L E SG + DI NV++ AYAK G ++ A + +
Sbjct: 295 -----------LRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQM 343
Query: 361 RRRGADPNAKTWEIFSDYYLRNG 383
+ G PNA T+ + + + ++G
Sbjct: 344 QAAGCTPNANTYSVLLNLFGQSG 366
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 96/225 (42%), Gaps = 6/225 (2%)
Query: 60 DTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET 119
+T KLR +L + LSE M G ++ + L+ AK I A F +
Sbjct: 290 ETFGKLR--RLEKVSDLLSE-MASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAA 346
Query: 120 --SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
+ N TY LLN + + + L +MK N + +N L+ ++ + G+ +++
Sbjct: 347 GCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEV 406
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
+ +M +I PD TY + A A ++++ M + V + ++ +
Sbjct: 407 VTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSS-KAYTGVIE 465
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 282
+ +A L+E+A A + ++ + Y L+ + + G + E
Sbjct: 466 AFGQAALYEEALVAFNTMHEVGSNPSIETYHSLLYSFARGGLVKE 510
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 72/163 (44%), Gaps = 4/163 (2%)
Query: 115 DLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP 174
D+ +SK Y ++ + + + E+A M E+ S ++SL+ +A+ G
Sbjct: 452 DIVPSSK---AYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETYHSLLYSFARGGLV 508
Query: 175 EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSN 234
++ AI+ + S I + T+N + A A + +M++ R D T
Sbjct: 509 KESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKS-RCDPDERTLEA 567
Query: 235 LASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQT 277
+ S+Y A L ++ +E++ + + Y ++ +YG+T
Sbjct: 568 VLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKT 610
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 145/322 (45%), Gaps = 3/322 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A K+ + M++ G+ V I +D + K + +D A + F + S + +T+ SL++
Sbjct: 426 AFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLID 485
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
K+ + A L E+M + + +++ + SL+ + K G E I +EM P
Sbjct: 486 GLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSP 545
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D N +M + + + EE+K G + D ++S L V+AG +
Sbjct: 546 DLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIP-DVMSYSILIHGLVKAGFARETYEL 604
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
++ + D AY I + ++G +++ Y++ ++ ++Y ++I L
Sbjct: 605 FYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAK 664
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+ L A F+E +S ++ + + +I + K GR++ A + E ++G PN T
Sbjct: 665 IDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYT 724
Query: 372 WEIFSDYYLRNGDMKLAVDCLE 393
W D ++ ++ A+ C +
Sbjct: 725 WNCLLDALVKAEEINEALVCFQ 746
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/330 (20%), Positives = 140/330 (42%), Gaps = 17/330 (5%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
AL L + M+ ++ + + +D K +D A +F ++ + +TY S++
Sbjct: 252 ALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIG 311
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK ++A + E+M++ + +N+++ Y G ++ ++++ KA +P
Sbjct: 312 VLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIP 371
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
YN + L + A R EEMK+D A + +T++ L + +AG E A +
Sbjct: 372 SVIAYNCILTCLGKKGRLGEALRTFEEMKKDA--APNLSTYNVLIDMLCKAGEVEAAFKV 429
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
++ ++ +I + L E I+ + + +++ ++I L
Sbjct: 430 RDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGK 489
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+ A + +++ + V +I ++ K GR E+ ++ + RG P
Sbjct: 490 QGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSP---- 545
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAIDTGRG 401
D L N M DC+ KA +TG+G
Sbjct: 546 -----DLRLLNAYM----DCVFKAGETGKG 566
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 141/319 (44%), Gaps = 10/319 (3%)
Query: 123 HLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQ 182
HL + +++ + +E + A +LL++MK L + +N + + K G +
Sbjct: 234 HL-FTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFH 292
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
E+K+ ++PD TY + L N + A + E+M+++ V + ++ + Y A
Sbjct: 293 EIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAY-AYNTMIMGYGSA 351
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL-AFPNTANIS 301
G F++A L+ + R + AY ++T G+ G L E R + ++ A PN + +
Sbjct: 352 GKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAAPNLS--T 409
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I +L ++ A K + ++ N+MI K +L+ A + E
Sbjct: 410 YNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMN 469
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
+ P+ T+ D + G + A E+ +D+ + V + I++F +
Sbjct: 470 HKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNA--VVYTSLIKSFFKCGR 527
Query: 422 QEKDVDGAEGFLEILKKAV 440
+E DG + F E++ +
Sbjct: 528 KE---DGHKIFKEMIHRGC 543
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 135/320 (42%), Gaps = 16/320 (5%)
Query: 145 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 204
L +M+EL S F +++ ++A+ G + +++ EMK++ + D YNV +
Sbjct: 220 LFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFG 279
Query: 205 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE-NRNAHRD 263
+ A + E+K G + D T++++ + + ++A +++E NRN
Sbjct: 280 KAGKVDMAWKFFHEIKSHGLLPDD-VTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCA 338
Query: 264 LSAYQFLITLYGQTGNLSEVYRIW--RSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 321
AY +I YG G E Y + + R P+ I+Y ++ L L A +
Sbjct: 339 Y-AYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSV--IAYNCILTCLGKKGRLGEALRT 395
Query: 322 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 381
F+E + A ++ NV+I K G +E A ++++ + G PN T I D +
Sbjct: 396 FEEMKKDAAP-NLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCK 454
Query: 382 NGDMKLAVDCLEKAIDTGRGDGGKWV-PSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 440
L++A G K P T + + ++ VD A E + +
Sbjct: 455 AKK-------LDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSD 507
Query: 441 DDLGVEVFEPLIRTYAAAGR 460
V+ LI+++ GR
Sbjct: 508 KIPNAVVYTSLIKSFFKCGR 527
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 116/255 (45%), Gaps = 12/255 (4%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TYGS+++ K ++A L E+ K L + + ++SL+ + K G ++ I++E
Sbjct: 653 VTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEE 712
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
+ + P+ YT+N + AL +I+ A + MK + + + T+S L +
Sbjct: 713 LMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMK-NLKGTPNHITYSILINGLCRVR 771
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTANIS 301
F KA +E++ + + Y +I + GN++E ++ + P++A S
Sbjct: 772 KFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSA--S 829
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA----EELK 357
Y +I+ L + A K F+E + ++ A K+ LE A L+
Sbjct: 830 YNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQKDECLEQAAIVGAVLR 889
Query: 358 ERARRRGADPNAKTW 372
E A+ + A A++W
Sbjct: 890 EIAKSQHA---ARSW 901
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 75/152 (49%), Gaps = 2/152 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP--ETSKNHLTYGSLLN 131
A + E + ++G+ V LD + K + I+ A F ++ + + NH+TY L+N
Sbjct: 706 AYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILIN 765
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C+ KA ++M++ L +++ + +++ AK G+ + ++ + KA+ +P
Sbjct: 766 GLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVP 825
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
DS +YN + L+ A ++ EE + G
Sbjct: 826 DSASYNAIIEGLSYSRRAMEAYKIFEETRMKG 857
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 101/238 (42%), Gaps = 3/238 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK--NHLTYGSLLN 131
A +L E M+ +G TV +D +AK+ +D A F + N + Y SL++
Sbjct: 636 AYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLID 695
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ K ++A ++E++ + L + +N L+ K + Q MK P
Sbjct: 696 GFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTP 755
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ TY++ + L V + A +EM++ G + + T++ + + +AG +A
Sbjct: 756 NHITYSILINGLCRVRKFNKAFVFWQEMQKQG-LKPNTITYTTMIAGLAKAGNIAEASSL 814
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 309
+ + D ++Y +I + E Y+I+ R+ N + + ++ L
Sbjct: 815 FERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDAL 872
>gi|15221411|ref|NP_177623.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
gi|75194055|sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74850, chloroplastic; AltName: Full=Protein PLASTID
TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor
gi|5882738|gb|AAD55291.1|AC008263_22 Contains 3 PF|01535 DUF17 domains [Arabidopsis thaliana]
gi|12323908|gb|AAG51934.1|AC013258_28 hypothetical protein; 81052-84129 [Arabidopsis thaliana]
gi|332197518|gb|AEE35639.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
Length = 862
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 163/386 (42%), Gaps = 24/386 (6%)
Query: 95 IHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKEL 152
I + L+ + +D F ++P S++ +Y +L+N Y + E + LL++MK
Sbjct: 146 IMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNE 205
Query: 153 NLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISG 211
+ S + +N+++ A+ G E + + EM+ I PD TYN + A A
Sbjct: 206 KISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDE 265
Query: 212 AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 271
AE V M DG + D TT+S+L + + EK L E+ + + D+++Y L+
Sbjct: 266 AEMVFRTMN-DGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLL 324
Query: 272 TLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPG----AEKCFKEW 325
Y ++G++ E ++ ++ A PN N VL+NL G + F E
Sbjct: 325 EAYAKSGSIKEAMGVFHQMQAAGCTPNA------NTYSVLLNLFGQSGRYDDVRQLFLEM 378
Query: 326 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 385
+S D N++I + + G + L +P+ +T+E + G
Sbjct: 379 KSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLH 438
Query: 386 KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGV 445
+ A L+ VPSS+ + F Q + A + + + +
Sbjct: 439 EDARKILQYMT------ANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSI 492
Query: 446 EVFEPLIRTYAAAG--RTSPVMLRRL 469
E F L+ ++A G + S +L RL
Sbjct: 493 ETFHSLLYSFARGGLVKESEAILSRL 518
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 108/263 (41%), Gaps = 37/263 (14%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N Y +++ +E + +K + ++M + S + +L+ Y + G E ++
Sbjct: 140 NEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELL 199
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVN-DISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
MK I P TYN + A A D G + EM+ +G + D T++ L S
Sbjct: 200 DRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEG-IQPDIVTYNTLLSACA 258
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
GL ++AE + + + DL+ Y L+ +G+ L +V
Sbjct: 259 IRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVC---------------- 302
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
DL G E SG + DI NV++ AYAK G ++ A + +
Sbjct: 303 -------------DLLG------EMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQM 343
Query: 361 RRRGADPNAKTWEIFSDYYLRNG 383
+ G PNA T+ + + + ++G
Sbjct: 344 QAAGCTPNANTYSVLLNLFGQSG 366
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 39/204 (19%), Positives = 85/204 (41%), Gaps = 3/204 (1%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELM 138
M G ++ + L+ AK I A F + + N TY LLN + +
Sbjct: 308 MASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGR 367
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
+ L +MK N + +N L+ ++ + G+ +++ + +M +I PD TY
Sbjct: 368 YDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEG 427
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
+ A A ++++ M + V + ++ + + +A L+E+A A +
Sbjct: 428 IIFACGKGGLHEDARKILQYMTANDIVPSS-KAYTGVIEAFGQAALYEEALVAFNTMHEV 486
Query: 259 NAHRDLSAYQFLITLYGQTGNLSE 282
++ + + L+ + + G + E
Sbjct: 487 GSNPSIETFHSLLYSFARGGLVKE 510
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 72/163 (44%), Gaps = 4/163 (2%)
Query: 115 DLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP 174
D+ +SK Y ++ + + + E+A M E+ S F+SL+ +A+ G
Sbjct: 452 DIVPSSK---AYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLV 508
Query: 175 EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSN 234
++ AI+ + S I + T+N + A A + +M++ R D T
Sbjct: 509 KESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKS-RCDPDERTLEA 567
Query: 235 LASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQT 277
+ S+Y A L ++ +E++ + + Y ++ +YG+T
Sbjct: 568 VLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKT 610
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/318 (20%), Positives = 136/318 (42%), Gaps = 8/318 (2%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
++Y +++N YC +K L+++M+ L + +NS++ L K+G + +++E
Sbjct: 11 VSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLRE 70
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M I+PD+ Y + + +I A ++ +EM++ R+ D+ ++ + G
Sbjct: 71 MINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQ-RIVPDFIAYTAVICGLCRCG 129
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
+A++ ++ +R D Y LI Y ++G + + + + + + ++Y
Sbjct: 130 KMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYT 189
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+ L L + A + E +I N ++ K G + A +L E
Sbjct: 190 ALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVA 249
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQE 423
G P+ T+ D Y + G+M A + L + +D G P+ T M F
Sbjct: 250 GMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRG------LQPTVITFNVLMNGFCMS 303
Query: 424 KDVDGAEGFLE-ILKKAV 440
++ E L +L+K +
Sbjct: 304 GMLEDGERLLAWMLEKGI 321
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 128/282 (45%), Gaps = 9/282 (3%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
+ N +TY +L + CK + A LL +M L + +NSL+ K+G+ +
Sbjct: 182 TPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVK 241
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+++EM+ + + PD+ T+ M A ++ A ++ EM G + TF+ L + +
Sbjct: 242 LMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRG-LQPTVITFNVLMNGF 300
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFP-- 295
+G+ E ER L + + + + Y L+ Y N+ I++ + R P
Sbjct: 301 CMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDS 360
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEE 355
NT NI +I+ +++ A KE N +I + K+ ++ A E
Sbjct: 361 NTYNI----LIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARE 416
Query: 356 LKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
L E RR G +A+ + +F D G+M+ A++ ++AI+
Sbjct: 417 LFEEMRREGMAADAEIYNLFVDISYGEGNMETALELCDEAIE 458
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 125/308 (40%), Gaps = 25/308 (8%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N TY S++ CK + AE +L +M + ++ + +L+ + K G+ + +
Sbjct: 44 NLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLF 103
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EM+ I+PD Y + L + A++V +M G V D T++ L Y +
Sbjct: 104 DEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRG-VEPDEVTYTTLIDGYCK 162
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFL---ITLYGQTGNLSEVYR--IWRSLRLAFPN 296
+G EKA ++ ++ Y L + GQ +E+ + L+L
Sbjct: 163 SGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNI-- 220
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
+Y +++ L ++ A K +E E D ++ AY K G + A EL
Sbjct: 221 ---CTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHEL 277
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDM----KLAVDCLEKAIDTGRGDGGKWVPSSET 412
RG P T+ + + + +G + +L LEK I +P++ T
Sbjct: 278 LREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGI----------MPNTTT 327
Query: 413 IRTFMRHF 420
+ M+ +
Sbjct: 328 YNSLMKQY 335
>gi|297746078|emb|CBI16134.3| unnamed protein product [Vitis vinifera]
Length = 453
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 156/361 (43%), Gaps = 42/361 (11%)
Query: 53 VFKWEVGDTLKKLRDRKLYYPALKLSE-NMEKRGMNKTVSDQAIHLDLVAKVQGIDAAEN 111
+ + + + +LR K AL++ E + +R D + L+ K+ GI E
Sbjct: 87 IHRGHIFHAINRLRKLKFNKRALEVMEWVVRERPYRPKELDYSYLLEFTTKLHGISQGEK 146
Query: 112 YFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKT 171
F +P +N L Y +L+ + + + A ++KM+EL S + FN L+ L++
Sbjct: 147 LFSHVPLEFQNELLYNNLVIACLDKGVIRLSLAYMKKMRELGHPISYLVFNRLIILHSSP 206
Query: 172 GHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTT 231
+ IP I+ +MKA + TYN+ M+ A ++I G +V EMK+ +V + +
Sbjct: 207 HRRKIIPRILTQMKADKVARHVSTYNILMKIEANEHNIEGLVKVFGEMKQQ-QVEPNEVS 265
Query: 232 FSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE--------- 282
+ LA+ + A L+ AE ++ +E + S LI LYG G ++
Sbjct: 266 YCLLATAHAVAKLYTVAEAYVEAVEKSITGNNWSTLDVLIILYGYLGKPTDLEPLVRNKV 325
Query: 283 ----------------VYRIWRSLR-LAFPNTANIS------------YLNMIQVLVNLK 313
+++ W +L+ L IS L+++++
Sbjct: 326 KKRVEINRAIQFNDICLFQTWEALKTLELGKGLTISTRIRKSIPWLETTLSIVEIFSENG 385
Query: 314 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 373
D+ AEK F+E ++ T V N +I AY K + L R GA P+A+T+
Sbjct: 386 DVENAEKLFEELKTANYTRYTFVYNTLIKAYVKAKVYD--PNLLRRMILGGARPDAETYS 443
Query: 374 I 374
+
Sbjct: 444 L 444
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 116/264 (43%), Gaps = 5/264 (1%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +L+N YC+E + E+A LL + + +N+++ K G ++ ++ E
Sbjct: 293 VTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIE 352
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + P++ TYN + + ++I A+ + +EM R G V D +FS+L + G
Sbjct: 353 MLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRG-VLPDLVSFSSLIGVLARNG 411
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANIS 301
+A +E+E D Y LI + + G LS+ ++ + R F + ++
Sbjct: 412 HLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDV--VT 469
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y + L K A+ F E D +I Y K+G ++ A L E
Sbjct: 470 YNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMV 529
Query: 362 RRGADPNAKTWEIFSDYYLRNGDM 385
R P+ T+ D + + G+M
Sbjct: 530 RTNLKPDKVTYNTLIDGFCKAGEM 553
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/389 (19%), Positives = 162/389 (41%), Gaps = 9/389 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLN 131
A +L + RGM + L + K+ D A++ +++ + + N TY +LL
Sbjct: 311 AFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLV 370
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C+ +A+ + ++M + + F+SL+ + A+ GH + +EM+ S I+P
Sbjct: 371 EICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVP 430
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D+ Y + + +S A ++ +EM G D T++ + + +F A+
Sbjct: 431 DNVIYTILIDGFCRNGALSDALKMRDEMLARG-CFMDVVTYNTFLNGLCKKKMFADADML 489
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
E+ R D + LI Y + GN+ + ++ ++ ++Y +I
Sbjct: 490 FNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCK 549
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
++ A++ + + D ++ + G L A L ++ +G PN T
Sbjct: 550 AGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVT 609
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG 431
Y R+GDM A + L K I G +P S + T + + +E +++ A
Sbjct: 610 CNTLIKGYCRSGDMPKAYEYLSKMISNG------IIPDSFSYNTLIDGYLKEANLEKAFI 663
Query: 432 FLEILKKAVDDLGVEVFEPLIRTYAAAGR 460
+ ++K + + ++ + A G+
Sbjct: 664 LINEMEKRGLQFNIITYNLILNGFCAEGK 692
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 139/327 (42%), Gaps = 23/327 (7%)
Query: 72 YPALKLSENMEKRGMNKTVSDQAIHLDLV------------AKVQGIDAAENYFVDLPET 119
Y AL ME+ G+ V D I+ L+ K++ A F+D+
Sbjct: 414 YQALMHFREMERSGI---VPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDV--- 467
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
+TY + LN CK+ M A+ L +M E + F +L+ Y K G+ +K
Sbjct: 468 ----VTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALN 523
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+ + M +++ PD TYN + ++ A+ + ++M R + D ++ + + +
Sbjct: 524 LFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKD-IIPDHISYGTVLNGF 582
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
+GL +A ++ + +L LI Y ++G++ + Y + +
Sbjct: 583 CSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDS 642
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
SY +I + +L A E E ++I N+++ + EG+++ AE++ +
Sbjct: 643 FSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRK 702
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMK 386
G +P+ T+ + ++ +MK
Sbjct: 703 MIEIGINPDGATYSSLINGHVSQDNMK 729
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 87/165 (52%), Gaps = 1/165 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+H++YG++LN +C + +A L ++M E + + + N+L+ Y ++G K +
Sbjct: 571 DHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYL 630
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+M ++ I+PDS++YN + ++ A +I EM++ G + + T++ + + +
Sbjct: 631 SKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRG-LQFNIITYNLILNGFCA 689
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
G ++AE+ L+++ + D + Y LI + N+ E +R
Sbjct: 690 EGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRF 734
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 119/302 (39%), Gaps = 15/302 (4%)
Query: 162 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 221
N L+ +TG + I E+ I + YT N+ + AL + +M+
Sbjct: 226 NKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEG 285
Query: 222 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 281
G V AD T++ L + Y GL E+A + L +R L Y ++ + G
Sbjct: 286 KG-VFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYD 344
Query: 282 EVYRIW-RSLRLAF-PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
+ L+L PN A +Y ++ + ++ A++ F E D+ +
Sbjct: 345 RAKDVLIEMLQLGLTPNAA--TYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSS 402
Query: 340 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+IG A+ G L A R G P+ + I D + RNG + A+ ++ + G
Sbjct: 403 LIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARG 462
Query: 400 RGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG-FLEILKKA-VDDLGVEVFEPLIRTYAA 457
T TF+ ++K A+ F E++++ V D F LIR Y
Sbjct: 463 ------CFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDF--YTFTTLIRGYCK 514
Query: 458 AG 459
G
Sbjct: 515 DG 516
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 75/172 (43%), Gaps = 2/172 (1%)
Query: 59 GDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE 118
G L L AL L + M ++G+ + + + + A Y +
Sbjct: 576 GTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMIS 635
Query: 119 TS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK 176
+ +Y +L++ Y KE EKA L+ +M++ L F+ + +N ++ + G ++
Sbjct: 636 NGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQE 695
Query: 177 IPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAAD 228
++++M I PD TY+ + + +++ A R +EM + G V D
Sbjct: 696 AEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPDD 747
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 116/264 (43%), Gaps = 5/264 (1%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +L+N YC+E + E+A LL + + +N+++ K G ++ ++ E
Sbjct: 293 VTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIE 352
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + P++ TYN + + ++I A+ + +EM R G V D +FS+L + G
Sbjct: 353 MLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRG-VLPDLVSFSSLIGVLARNG 411
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANIS 301
+A +E+E D Y LI + + G LS+ ++ + R F + ++
Sbjct: 412 HLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDV--VT 469
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y + L K A+ F E D +I Y K+G ++ A L E
Sbjct: 470 YNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMV 529
Query: 362 RRGADPNAKTWEIFSDYYLRNGDM 385
R P+ T+ D + + G+M
Sbjct: 530 RTNLKPDKVTYNTLIDGFCKAGEM 553
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/389 (19%), Positives = 162/389 (41%), Gaps = 9/389 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLN 131
A +L + RGM + L + K+ D A++ +++ + + N TY +LL
Sbjct: 311 AFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLV 370
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C+ +A+ + ++M + + F+SL+ + A+ GH + +EM+ S I+P
Sbjct: 371 EICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVP 430
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D+ Y + + +S A ++ +EM G D T++ + + +F A+
Sbjct: 431 DNVIYTILIDGFCRNGALSDALKMRDEMLARG-CFMDVVTYNTFLNGLCKKKMFADADML 489
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
E+ R D + LI Y + GN+ + ++ ++ ++Y +I
Sbjct: 490 FNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCK 549
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
++ A++ + + D ++ + G L A L ++ +G PN T
Sbjct: 550 AGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVT 609
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG 431
Y R+GDM A + L K I G +P S + T + + +E +++ A
Sbjct: 610 CNTLIKGYCRSGDMPKAYEYLSKMISNG------IIPDSFSYNTLIDGYLKEANLEKAFI 663
Query: 432 FLEILKKAVDDLGVEVFEPLIRTYAAAGR 460
+ ++K + + ++ + A G+
Sbjct: 664 LINEMEKRGLQFNIITYNLILNGFCAEGK 692
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 139/327 (42%), Gaps = 23/327 (7%)
Query: 72 YPALKLSENMEKRGMNKTVSDQAIHLDLV------------AKVQGIDAAENYFVDLPET 119
Y AL ME+ G+ V D I+ L+ K++ A F+D+
Sbjct: 414 YQALMHFREMERSGI---VPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDV--- 467
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
+TY + LN CK+ M A+ L +M E + F +L+ Y K G+ +K
Sbjct: 468 ----VTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALN 523
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+ + M +++ PD TYN + ++ A+ + ++M R + D ++ + + +
Sbjct: 524 LFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKD-IIPDHISYGTVLNGF 582
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
+GL +A ++ + +L LI Y ++G++ + Y + +
Sbjct: 583 CSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDS 642
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
SY +I + +L A E E ++I N+++ + EG+++ AE++ +
Sbjct: 643 FSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRK 702
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMK 386
G +P+ T+ + ++ +MK
Sbjct: 703 MIEIGINPDGATYSSLINGHVSQDNMK 729
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 87/165 (52%), Gaps = 1/165 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+H++YG++LN +C + +A L ++M E + + + N+L+ Y ++G K +
Sbjct: 571 DHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYL 630
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+M ++ I+PDS++YN + ++ A +I EM++ G + + T++ + + +
Sbjct: 631 SKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRG-LQFNIITYNLILNGFCA 689
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
G ++AE+ L+++ + D + Y LI + N+ E +R
Sbjct: 690 EGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRF 734
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 119/302 (39%), Gaps = 15/302 (4%)
Query: 162 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 221
N L+ +TG + I E+ I + YT N+ + AL + +M+
Sbjct: 226 NKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEG 285
Query: 222 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 281
G V AD T++ L + Y GL E+A + L +R L Y ++ + G
Sbjct: 286 KG-VFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYD 344
Query: 282 EVYRIW-RSLRLAF-PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
+ L+L PN A +Y ++ + ++ A++ F E D+ +
Sbjct: 345 RAKDVLIEMLQLGLTPNAA--TYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSS 402
Query: 340 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+IG A+ G L A R G P+ + I D + RNG + A+ ++ + G
Sbjct: 403 LIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARG 462
Query: 400 RGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG-FLEILKKA-VDDLGVEVFEPLIRTYAA 457
T TF+ ++K A+ F E++++ V D F LIR Y
Sbjct: 463 ------CFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDF--YTFTTLIRGYCK 514
Query: 458 AG 459
G
Sbjct: 515 DG 516
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 75/172 (43%), Gaps = 2/172 (1%)
Query: 59 GDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE 118
G L L AL L + M ++G+ + + + + A Y +
Sbjct: 576 GTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMIS 635
Query: 119 TS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK 176
+ +Y +L++ Y KE EKA L+ +M++ L F+ + +N ++ + G ++
Sbjct: 636 NGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQE 695
Query: 177 IPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAAD 228
++++M I PD TY+ + + +++ A R +EM + G V D
Sbjct: 696 AEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPDD 747
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 150/364 (41%), Gaps = 38/364 (10%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A++L + ME++G V + +D + K + I A + ++ S N +TY S+L+
Sbjct: 101 AIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILH 160
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C + +A +L ++M E N+ ++ FN L+ +K G + + + M + P
Sbjct: 161 GFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEP 220
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDG---------------------------- 223
+ TYN M + + + A+++ M R G
Sbjct: 221 NVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLL 280
Query: 224 ------RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQT 277
+ D T+S L + + G + A++ L+E+ + DL Y ++ +
Sbjct: 281 AEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQ 340
Query: 278 GNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVT 337
G+L E + + ++++ + Y +IQ + N L A + F D+
Sbjct: 341 GHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTY 400
Query: 338 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
VMI K G A EL G PN+ T+ + +LRNGD A +E+ +
Sbjct: 401 TVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMV- 459
Query: 398 TGRG 401
GRG
Sbjct: 460 -GRG 462
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 117/265 (44%), Gaps = 15/265 (5%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY +L++ YC + ++A+ L M S +N L+ + K+G ++ ++ EM
Sbjct: 224 TYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEM 283
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
++ PD+ TY+ M+ A++++EEM+ G + D T+S + + G
Sbjct: 284 SHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYG-LLPDLMTYSIVLDGLCKQGH 342
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
++A LK ++ ++ Y LI G L ++ +L + ++Y
Sbjct: 343 LDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTV 402
Query: 305 MIQVLVNLKDLPGAEKC--FKEWE-SGC----ATYDIRVTNVMIGAYAKEGRLENAEELK 357
MI L LK E C F++ GC TY NV+I + + G NA L
Sbjct: 403 MISGL--LKGGLSNEACELFRDMAVHGCLPNSCTY-----NVIIQGFLRNGDTSNAGRLI 455
Query: 358 ERARRRGADPNAKTWEIFSDYYLRN 382
E RG ++ T+++ SD R+
Sbjct: 456 EEMVGRGFSADSSTFQMLSDLESRD 480
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/343 (19%), Positives = 141/343 (41%), Gaps = 40/343 (11%)
Query: 71 YYPALKLSENMEKRGMNKT-VSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYG 127
++ A + NM K G+ V+ + L +K + IDA + F ++ + + +TY
Sbjct: 28 FHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVK-LFDEMVKMGYEPDVITYS 86
Query: 128 SLLNCYCKELMTEKAEALLEKMKE---------------------------------LNL 154
+++N CK T A LL+KM+E +N
Sbjct: 87 TIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNR 146
Query: 155 GFSS--MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA 212
G S + ++S++ + G + ++ ++M ++MPD+ T+N+ + L+ I A
Sbjct: 147 GISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEA 206
Query: 213 ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLIT 272
+ V E M G V + T++ L Y ++A++ + + + +Y LI
Sbjct: 207 QCVFETMIEKG-VEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIK 265
Query: 273 LYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY 332
+ ++G + E + + ++Y +++ A+K +E S
Sbjct: 266 GHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLP 325
Query: 333 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 375
D+ ++++ K+G L+ A EL + + +PN + I
Sbjct: 326 DLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTIL 368
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 137/304 (45%), Gaps = 7/304 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY L++ +CKE E+A +L++M L +++ +N L++ K + +
Sbjct: 423 NVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMF 482
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+M + PD +T+N + L VN A + ++M +G V A+ T++ L ++
Sbjct: 483 GDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEG-VIANTITYNTLIHAFLR 541
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G ++A + + ++ R D Y LI + GN+ + ++ + N NIS
Sbjct: 542 RGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNIS 601
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
+I L ++ A + ++ T DI N +I K GR + A L ++ +
Sbjct: 602 CNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQ 661
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
G P+A T+ ++ + G A L + +D+G ++P+ T + +F
Sbjct: 662 VEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSG------FIPNEVTWYILVSNFI 715
Query: 422 QEKD 425
+E D
Sbjct: 716 KEGD 719
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 109/277 (39%), Gaps = 43/277 (15%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
+N ++ + P+ +P + EM + I P YT+ V M+AL VN++ A ++++M
Sbjct: 185 YNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMT 244
Query: 221 RDGRVA----------------------------------ADWTTFSNLASIYVEAGLFE 246
R G V D TF++ +
Sbjct: 245 RHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIH 304
Query: 247 KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI 306
+A + + + R + Y L+ + G + E R L PN + + +I
Sbjct: 305 EAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEA----RMLLNKVPNPNVVLFNTLI 360
Query: 307 QVLVNLKDLPGAEKCFKE--WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
V+ L A+ E GC DI N +I K+G L +A EL + +G
Sbjct: 361 NGYVSRGRLDEAKAVMHESMLSVGCGP-DIFTYNTLILGLCKKGYLVSARELMNEMQIKG 419
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRG 401
+PN T+ I D + + G ++ A + L++ +G+G
Sbjct: 420 CEPNVITYTILIDRFCKEGRLEEARNVLDEM--SGKG 454
>gi|115463017|ref|NP_001055108.1| Os05g0294600 [Oryza sativa Japonica Group]
gi|113578659|dbj|BAF17022.1| Os05g0294600 [Oryza sativa Japonica Group]
gi|125551683|gb|EAY97392.1| hypothetical protein OsI_19323 [Oryza sativa Indica Group]
gi|215697097|dbj|BAG91091.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630985|gb|EEE63117.1| hypothetical protein OsJ_17925 [Oryza sativa Japonica Group]
Length = 757
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 114/265 (43%), Gaps = 37/265 (13%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
+ N Y +L+N YCK E+AE + +MKE L ++M +N LM Y + PE + +
Sbjct: 406 ASNTSMYNTLINAYCKANQIEEAEGVFVEMKEKGLSATAMTYNILMGAYCRRLQPEVVES 465
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDIS-GAERVIEEMKRDGRVAADWTTFSNLASI 238
++ EM+ + P++ +YN +R +S AE MK DG + +T+++L
Sbjct: 466 LLLEMQDLGLRPNARSYNFLIRVYGQQKKMSEKAEDAFLRMKTDG-IMPTSSTYTSLLCA 524
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
Y GL EKA +++ L Y LI ++ + G+ ++ WRS
Sbjct: 525 YAVNGLHEKAYLTYVDMKREGLKPSLETYTALIDMFRRAGDTEKLMETWRS--------- 575
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
++N K +PG F ++++ AK G A ++
Sbjct: 576 ----------MINEK-VPGTRVIF---------------HMVLDGLAKHGLYVQATDVIY 609
Query: 359 RARRRGADPNAKTWEIFSDYYLRNG 383
RR G P T+ I + + R G
Sbjct: 610 EFRRAGLQPTVMTYNILMNAFARGG 634
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 53/102 (51%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+ + +L+ K + +A ++ + + L + M +N LM +A+ G K+P +++E
Sbjct: 586 VIFHMVLDGLAKHGLYVQATDVIYEFRRAGLQPTVMTYNILMNAFARGGQHYKLPQLLKE 645
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRV 225
M A + PDS TY+ + A A V D S A + M R G++
Sbjct: 646 MAAMELKPDSVTYSTMIYAYARVRDFSRAFYYHKLMVRSGQL 687
>gi|414591141|tpg|DAA41712.1| TPA: hypothetical protein ZEAMMB73_063178 [Zea mays]
Length = 374
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 129/305 (42%), Gaps = 18/305 (5%)
Query: 94 AIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKE 151
++ +D + K +D A D+P S N L Y SLL+CY ++ + + +LE M+
Sbjct: 18 SVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIME- 76
Query: 152 LNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISG 211
N G + + G P P ++ E + + P+ TY V + + +
Sbjct: 77 -NEGIEATVGD------GTCGGP---PKVLDECVGNGVEPNERTYGVLINGFCKIGQMEA 126
Query: 212 AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 271
AE ++ +M+ G V + F+ + Y G+ + A + +E D+ Y L
Sbjct: 127 AEMLLADMQGQG-VGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLA 185
Query: 272 TLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGC 329
+ L E + + PN ++Y +I + D+ A + F+E
Sbjct: 186 CGLCRVNRLDEAKTLLHIMIEMGVVPNY--VTYTTLISIHCKDGDMVEARRLFREMAEKG 243
Query: 330 ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 389
AT + NVMI YAK+G + AE ++ ++G P+ T+ + NG + +A+
Sbjct: 244 ATPSVVTYNVMIHGYAKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVAL 303
Query: 390 DCLEK 394
E+
Sbjct: 304 KLFEE 308
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 116/253 (45%), Gaps = 5/253 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N TYG L+N +CK E AE LL M+ +G + + FN+++ Y + G + I
Sbjct: 107 NERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIK 166
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M+ + D YTYN L VN + A+ ++ M G V ++ T++ L SI+ +
Sbjct: 167 AAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMG-VVPNYVTYTTLISIHCK 225
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTAN 299
G +A R +E+ + A + Y +I Y + G++ E R + + + P+
Sbjct: 226 DGDMVEARRLFREMAEKGATPSVVTYNVMIHGYAKKGSIREAERFRKEMEKKGFVPDV-- 283
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+Y +++ + A K F+E + ++ +I AKEGR E A +L +
Sbjct: 284 YTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDD 343
Query: 360 ARRRGADPNAKTW 372
+ G P+ +
Sbjct: 344 MLKAGLIPDDSLY 356
>gi|356540375|ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Glycine max]
Length = 1476
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 127/312 (40%), Gaps = 38/312 (12%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTG--HPEKIPAIIQ 182
Y +++ Y + K + LL+ M+E + FN+L+ K+G P ++
Sbjct: 251 VYNAMMGVYARNGRFSKVKELLDLMRERGCVPDLVSFNTLINARMKSGAMEPNLALQLLN 310
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
E++ S I PD TYN + A + +++ A V +M+ R D T++ + S+Y
Sbjct: 311 EVRRSGIRPDIITYNTLISACSRESNLEEAVAVFSDME-SHRCQPDLWTYNAMISVYGRC 369
Query: 243 GLFEKAERALKELEN-----------------------------------RNAHRDLSAY 267
KAE KELE+ R +D Y
Sbjct: 370 ARARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTY 429
Query: 268 QFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES 327
+I +YG+ G + +I+R ++ + N ++Y +I L + A E
Sbjct: 430 NTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAANVMSEMLD 489
Query: 328 GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKL 387
+ + +I AYAK G+ E AEE RR G P+ + + D++LR +MK
Sbjct: 490 AGVKPTLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDRLAYSVMLDFFLRFNEMKK 549
Query: 388 AVDCLEKAIDTG 399
A+ + I G
Sbjct: 550 AMGLYHEMIREG 561
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/312 (20%), Positives = 122/312 (39%), Gaps = 44/312 (14%)
Query: 151 ELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM--RALAAVND 208
E ++G + +N++M +YA+ G K+ ++ M+ +PD ++N + R + +
Sbjct: 242 ESSVGDTVQVYNAMMGVYARNGRFSKVKELLDLMRERGCVPDLVSFNTLINARMKSGAME 301
Query: 209 ISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQ 268
+ A +++ E++R G + D T++ L S E+A ++E+ DL Y
Sbjct: 302 PNLALQLLNEVRRSG-IRPDIITYNTLISACSRESNLEEAVAVFSDMESHRCQPDLWTYN 360
Query: 269 FLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESG 328
+I++YG+ + AE+ FKE ES
Sbjct: 361 AMISVYGRCARARK-----------------------------------AEELFKELESK 385
Query: 329 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 388
D N ++ A+++EG E ++ E +RG + T+ Y + G A
Sbjct: 386 GFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQA 445
Query: 389 VDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVF 448
+ +GR P + T + + V+ A + + A + +
Sbjct: 446 MQIYRDMKSSGRN------PDAVTYTVLIDSLGKASKVEEAANVMSEMLDAGVKPTLHTY 499
Query: 449 EPLIRTYAAAGR 460
LI YA AG+
Sbjct: 500 SALICAYAKAGK 511
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 1/156 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY +L+ YC++ E+ +L+ KM+ L L + SL+T + K E+ + +E+
Sbjct: 986 TYNTLIIMYCRDRRPEEGFSLMNKMRSLGLEPKLDTYRSLITAFNKQRMYEQAEELFEEL 1045
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+++ D Y++ M+ D AE ++ MK G + +T L Y ++G
Sbjct: 1046 RSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAIMKESG-IEPTISTMHLLMVSYGKSGQ 1104
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
E+AE LK L D Y +I Y + G+
Sbjct: 1105 PEEAENVLKNLRTTGVVLDTLPYSSVIDAYLKKGDF 1140
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/256 (19%), Positives = 105/256 (41%), Gaps = 1/256 (0%)
Query: 144 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 203
++++++++ L S + +A+ G+ ++ I MKA+ P + Y + +R L
Sbjct: 865 VVIQELQDMGLKISKSSILLTLEAFAQAGNLFEVQKIYNGMKAAGYFPTMHVYRIMLRLL 924
Query: 204 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 263
+ E ++ EM+ G D +++ +Y+ F+ +++++ + D
Sbjct: 925 CKCKRVRDVETMLCEMEEAG-FQPDLQICNSILKLYLGIEDFKSMGIIYQKIQDASLKPD 983
Query: 264 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 323
Y LI +Y + E + + +R +Y ++I + AE+ F+
Sbjct: 984 EETYNTLIIMYCRDRRPEEGFSLMNKMRSLGLEPKLDTYRSLITAFNKQRMYEQAEELFE 1043
Query: 324 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
E S D ++M+ Y G AE L + G +P T + Y ++G
Sbjct: 1044 ELRSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAIMKESGIEPTISTMHLLMVSYGKSG 1103
Query: 384 DMKLAVDCLEKAIDTG 399
+ A + L+ TG
Sbjct: 1104 QPEEAENVLKNLRTTG 1119
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 116/284 (40%), Gaps = 10/284 (3%)
Query: 93 QAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKEL 152
QA +L V K+ A YF + H+ Y +L CK E +L +M+E
Sbjct: 891 QAGNLFEVQKIYNGMKAAGYFPTM------HV-YRIMLRLLCKCKRVRDVETMLCEMEEA 943
Query: 153 NLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA 212
NS++ LY + + I Q+++ +S+ PD TYN +
Sbjct: 944 GFQPDLQICNSILKLYLGIEDFKSMGIIYQKIQDASLKPDEETYNTLIIMYCRDRRPEEG 1003
Query: 213 ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLIT 272
++ +M+ G + T+ +L + + + ++E+AE +EL + D + Y ++
Sbjct: 1004 FSLMNKMRSLG-LEPKLDTYRSLITAFNKQRMYEQAEELFEELRSNGYKLDRAFYHLMMK 1062
Query: 273 LYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG-AEKCFKEWESGCAT 331
Y +G+ + + ++ + IS ++++ V P AE K +
Sbjct: 1063 TYRTSGDHRKAENLLAIMKESGIE-PTISTMHLLMVSYGKSGQPEEAENVLKNLRTTGVV 1121
Query: 332 YDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 375
D + +I AY K+G + E + G +P+ + W F
Sbjct: 1122 LDTLPYSSVIDAYLKKGDFKAGIEKLTEMKEAGIEPDHRIWTCF 1165
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 111/271 (40%), Gaps = 5/271 (1%)
Query: 76 KLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLNCY 133
K+ M+ G T+ I L L+ K + + E ++ E + S+L Y
Sbjct: 900 KIYNGMKAAGYFPTMHVYRIMLRLLCKCKRVRDVETMLCEMEEAGFQPDLQICNSILKLY 959
Query: 134 CKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDS 193
+ + +K+++ +L +N+L+ +Y + PE+ +++ +M++ + P
Sbjct: 960 LGIEDFKSMGIIYQKIQDASLKPDEETYNTLIIMYCRDRRPEEGFSLMNKMRSLGLEPKL 1019
Query: 194 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 253
TY + A AE + EE++ +G D + + Y +G KAE L
Sbjct: 1020 DTYRSLITAFNKQRMYEQAEELFEELRSNG-YKLDRAFYHLMMKTYRTSGDHRKAENLLA 1078
Query: 254 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLK 313
++ +S L+ YG++G E + ++LR + Y ++I +
Sbjct: 1079 IMKESGIEPTISTMHLLMVSYGKSGQPEEAENVLKNLRTTGVVLDTLPYSSVIDAYLKKG 1138
Query: 314 DL-PGAEKCFKEWESGCATYDIRVTNVMIGA 343
D G EK + E+G D R+ I A
Sbjct: 1139 DFKAGIEKLTEMKEAGIEP-DHRIWTCFIRA 1168
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 81/393 (20%), Positives = 158/393 (40%), Gaps = 69/393 (17%)
Query: 114 VDLPETSKNHLTYGS----------------LLNCYCKELMTEKAEALLEKMKELNLGFS 157
+DLPET+ +HL Y + ++ Y K + +KAE+L+ +++
Sbjct: 750 MDLPETA-HHLLYHAEKNGIILDNDISVYIDIVETYGKLKIWQKAESLVGSLRQRCSKMD 808
Query: 158 SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIE 217
+N+L+ YA +G E+ AI M P + N ++AL ++ VI+
Sbjct: 809 RKVWNALIHAYAFSGCYERARAIFNTMMRDGPSPTVDSVNGLLQALIVDRRLNELYVVIQ 868
Query: 218 EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITL--YG 275
E++ + GL +S L+TL +
Sbjct: 869 ELQ--------------------DMGL------------------KISKSSILLTLEAFA 890
Query: 276 QTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYD 333
Q GNL EV +I+ ++ A FP T ++ Y M+++L K + E E E D
Sbjct: 891 QAGNLFEVQKIYNGMKAAGYFP-TMHV-YRIMLRLLCKCKRVRDVETMLCEMEEAGFQPD 948
Query: 334 IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
+++ N ++ Y ++ + ++ + P+ +T+ Y R+ + +
Sbjct: 949 LQICNSILKLYLGIEDFKSMGIIYQKIQDASLKPDEETYNTLIIMYCRDRRPEEGFSLMN 1008
Query: 394 KAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIR 453
K G P +T R+ + F +++ + AE E L+ L + +++
Sbjct: 1009 KMRSLG------LEPKLDTYRSLITAFNKQRMYEQAEELFEELRSNGYKLDRAFYHLMMK 1062
Query: 454 TYAAAG--RTSPVMLRRLKMEKVEVSEASKKLL 484
TY +G R + +L +K +E + ++ LL
Sbjct: 1063 TYRTSGDHRKAENLLAIMKESGIEPTISTMHLL 1095
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 79/182 (43%), Gaps = 7/182 (3%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS-KNHL-TYGSLLN 131
A+++ +M+ G N + +D + K ++ A N ++ + K L TY +L+
Sbjct: 445 AMQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAANVMSEMLDAGVKPTLHTYSALIC 504
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
Y K E+AE M+ + + ++ ++ + + +K + EM P
Sbjct: 505 AYAKAGKREEAEETFNCMRRSGIKPDRLAYSVMLDFFLRFNEMKKAMGLYHEMIREGFTP 564
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D+ Y V M AL N +R+I +M+ + ++S+ V+ G ++ A +
Sbjct: 565 DNGLYEVMMHALVRENMWDVVDRIIRDMEELSGMNPQV-----ISSVLVKGGCYDHAAKM 619
Query: 252 LK 253
LK
Sbjct: 620 LK 621
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 141 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 200
KAE LL MKE + + + LM Y K+G PE+ +++ ++ + ++ D+ Y+ +
Sbjct: 1072 KAENLLAIMKESGIEPTISTMHLLMVSYGKSGQPEEAENVLKNLRTTGVVLDTLPYSSVI 1131
Query: 201 RALAAVNDISGAERVIEEMKRDGRVAAD---WTTFSNLASI 238
A D + EMK G + D WT F A++
Sbjct: 1132 DAYLKKGDFKAGIEKLTEMKEAG-IEPDHRIWTCFIRAATL 1171
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 9/150 (6%)
Query: 255 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF---PNTANISYLNMIQVLVN 311
LE R + + F++ GQ N ++ L L PN ++ ++ VL
Sbjct: 171 LEERRVQMTPTDFCFVVKWVGQQ-NWQRALELYECLNLRHWYAPNARMVA--TILGVLGK 227
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
A + F ES ++V N M+G YA+ GR +EL + R RG P+ +
Sbjct: 228 ANQEALAVEIFARAESSVGD-TVQVYNAMMGVYARNGRFSKVKELLDLMRERGCVPDLVS 286
Query: 372 WEIFSDYYLRNGDMK--LAVDCLEKAIDTG 399
+ + +++G M+ LA+ L + +G
Sbjct: 287 FNTLINARMKSGAMEPNLALQLLNEVRRSG 316
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 59/154 (38%), Gaps = 36/154 (23%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
++ +TY ++++ +Y K G ++ I
Sbjct: 424 QDEMTYNTIIH-----------------------------------MYGKQGRHDQAMQI 448
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
++MK+S PD+ TY V + +L + + A V+ EM D V T+S L Y
Sbjct: 449 YRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAANVMSEM-LDAGVKPTLHTYSALICAYA 507
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLY 274
+AG E+AE + D AY ++ +
Sbjct: 508 KAGKREEAEETFNCMRRSGIKPDRLAYSVMLDFF 541
>gi|223948189|gb|ACN28178.1| unknown [Zea mays]
gi|413935735|gb|AFW70286.1| hypothetical protein ZEAMMB73_980179 [Zea mays]
Length = 597
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 146/364 (40%), Gaps = 13/364 (3%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELM 138
M++ G+ T + +LD + K + + A + + + N TY ++N Y K
Sbjct: 233 MQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLMINVYGKANQ 292
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
+ + +MK + + + +L+ +A+ G EK + +EM+ + PD Y YN
Sbjct: 293 PMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNA 352
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
M A + GA + M+ G D +++ L + AGL ++AE A +EL+ +
Sbjct: 353 LMEAYSRAGLPQGASEIFSLMEHMG-CEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQ 411
Query: 259 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 318
+ ++ L++ + ++GN++ + L + + M+ L
Sbjct: 412 GMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDM 471
Query: 319 EKCFKEWESG----CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 374
E+ F E G D NVM+ AY + G L+ E RG + TW
Sbjct: 472 ERLFAAMERGDGAIAGAPDTSTYNVMVNAYGRAGYLDRMEAAFRSLAARGLAADVVTWTS 531
Query: 375 FSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 434
Y R + + E+ +D G P + T + + E+ V+ + +
Sbjct: 532 RIGAYARKKEYGQCLRVFEEMVDAG------CYPDAGTAKVLLAACSDERQVEQVKAIVR 585
Query: 435 ILKK 438
+ K
Sbjct: 586 SMHK 589
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 133/326 (40%), Gaps = 24/326 (7%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY LL YC +AE ++ +M+ + ++ +N+ + K EK + Q M
Sbjct: 209 TYALLLRAYCGSGQLHRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRM 268
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
K ++ TY + + N + RV EMK G + T++ L + + GL
Sbjct: 269 KKERCRTNTETYTLMINVYGKANQPMSSLRVFREMKSVG-CKPNICTYTALVNAFAREGL 327
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTG---NLSEVYRIWRSLRLAFPNTANIS 301
EKAE +E++ D+ AY L+ Y + G SE++ + + P+ A S
Sbjct: 328 CEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCE-PDRA--S 384
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y ++ AE F+E + ++ +++ A+A+ G + EE+ +
Sbjct: 385 YNILVDAFGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLH 444
Query: 362 RRGADPNAKTWEIFSDYYLRNG---DMKLAVDCLEKAIDTGRGDGG-KWVPSSETIRTFM 417
+ G P+ + Y R G DM+ +E RGDG P + T +
Sbjct: 445 KSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAME------RGDGAIAGAPDTSTYNVMV 498
Query: 418 RHFEQEKDVDGAEGFLEILKKAVDDL 443
+ G G+L+ ++ A L
Sbjct: 499 NAY-------GRAGYLDRMEAAFRSL 517
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/263 (19%), Positives = 115/263 (43%), Gaps = 3/263 (1%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+ Y L++ Y ++ +AEA + E + + L+ Y +G + +I E
Sbjct: 173 ICYNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGSGQLHRAEGVISE 232
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ + I P + YN ++ L A V + MK++ R + T++ + ++Y +A
Sbjct: 233 MQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKE-RCRTNTETYTLMINVYGKAN 291
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
+ R +E+++ ++ Y L+ + + G + ++ ++ A + ++
Sbjct: 292 QPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQA-GHEPDVYAY 350
Query: 304 NMIQVLVNLKDLP-GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
N + + LP GA + F E D N+++ A+ + G + AE + ++
Sbjct: 351 NALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQ 410
Query: 363 RGADPNAKTWEIFSDYYLRNGDM 385
+G P K+ + + R+G++
Sbjct: 411 QGMRPTMKSHMLLLSAHARSGNV 433
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/235 (19%), Positives = 86/235 (36%), Gaps = 36/235 (15%)
Query: 184 MKASSIMPDSYTYN-----------------------------------VWMRALAAVND 208
++ SS PD YN + +RA
Sbjct: 163 LRRSSFRPDIICYNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGSGQ 222
Query: 209 ISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQ 268
+ AE VI EM+R+G + T ++ ++A EKA + ++ + Y
Sbjct: 223 LHRAEGVISEMQRNG-IPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYT 281
Query: 269 FLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESG 328
+I +YG+ R++R ++ +Y ++ AE+ F+E +
Sbjct: 282 LMINVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQA 341
Query: 329 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
D+ N ++ AY++ G + A E+ G +P+ ++ I D + R G
Sbjct: 342 GHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAG 396
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 133/308 (43%), Gaps = 7/308 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +T +L++ CK ++ LL M E L F + +N+L++ K G ++ +
Sbjct: 500 NIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELK 559
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+EM I PD YT+N+ + L + I A R+ E K++G V + T+ + Y +
Sbjct: 560 EEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVY-TYGVMIDGYCK 618
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
A E+ E L EL ++ + Y LI Y GN++ +R+ ++ + +
Sbjct: 619 ANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCAT 678
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +++ L N+ + A+ E ++ +IG Y+K G++ + +
Sbjct: 679 YSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMS 738
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
PN T+ I D + + G K A L + + G +P + T F
Sbjct: 739 SHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKG------ILPDAVTYNAFTNGLC 792
Query: 422 QEKDVDGA 429
+E V+ A
Sbjct: 793 KEGKVEEA 800
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 178/424 (41%), Gaps = 20/424 (4%)
Query: 74 ALKLSENMEKRGM--NKTVSDQAIHLDLVAKVQGIDAAENYFVDL--PETSKNHLTYGSL 129
A+ L MEK G+ N + IH + K +D A + + + S + +TY
Sbjct: 275 AIGLFSKMEKLGVAPNVVTYNNIIHG--LCKSGRLDEAYRFKEKMVKEKVSPSLITYSVF 332
Query: 130 LNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
+N K ++A +L++M EL + + +N+L+ Y K G+ + I +M + I
Sbjct: 333 INGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGI 392
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
P+S T N ++ + I AE V+EEM G + + +FS + + F A
Sbjct: 393 SPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRG-LPINQGSFSMVINWLCLKFRFVTAL 451
Query: 250 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW-RSLRLAF-PNTANISYLNMIQ 307
++E+ RN + L++ + G E +W R L F PN + L I
Sbjct: 452 HFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNAL--IH 509
Query: 308 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
L ++ K ++ +D N +I KEG+++ ELKE ++G P
Sbjct: 510 GLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQP 569
Query: 368 NAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVD 427
+ T+ + + L N D +D + + +G +VP+ T + + + V+
Sbjct: 570 DIYTFNLLL-HGLCNAD---KIDEASRLWHECKKNG--YVPNVYTYGVMIDGYCKANKVE 623
Query: 428 GAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRR--LKMEKVEVSEAS-KKLL 484
E L L +L V+ LIR Y G + R +K V +S A+ L+
Sbjct: 624 EGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLM 683
Query: 485 EAIC 488
+C
Sbjct: 684 HGLC 687
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 99/219 (45%), Gaps = 3/219 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
+L E M K+G+ + + L + ID A + + + N TYG +++
Sbjct: 555 GFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMID 614
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
YCK E+ E LL ++ L +S+ +NSL+ Y G+ + +MK+ ++
Sbjct: 615 GYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLL 674
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
TY+ M L + + A+ +++EM+++G + + ++ + Y + G K
Sbjct: 675 SCATYSSLMHGLCNIGLVDDAKHLLDEMRKEG-LLPNVVCYTTIIGGYSKLGQMNKVNIV 733
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
L+E+ + N H + Y +I + + G E ++ +
Sbjct: 734 LQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEM 772
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 73/147 (49%), Gaps = 1/147 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY SL++ C + + A+ LL++M++ L + + + +++ Y+K G K+ ++QEM
Sbjct: 678 TYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEM 737
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ +I P+ +TY + + + A +++ EM G + D T++ + + G
Sbjct: 738 SSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKG-ILPDAVTYNAFTNGLCKEGK 796
Query: 245 FEKAERALKELENRNAHRDLSAYQFLI 271
E+A + E+ + D Y LI
Sbjct: 797 VEEAFKVCDEMSSGAVCLDEITYTTLI 823
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 77/164 (46%), Gaps = 3/164 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
A +L ++M+ RG+ + + + + + + +D A++ ++ + N + Y +++
Sbjct: 660 AFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIG 719
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
Y K K +L++M N+ + + ++ + K G ++ ++ EM I+P
Sbjct: 720 GYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILP 779
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
D+ TYN + L + A +V +EM G V D T++ L
Sbjct: 780 DAVTYNAFTNGLCKEGKVEEAFKVCDEMS-SGAVCLDEITYTTL 822
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 103/255 (40%), Gaps = 25/255 (9%)
Query: 148 KMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVN 207
+ K L GF++ F +L AK G + P T + +L N
Sbjct: 196 QFKHLGFGFAADVF----SLLAKKG----------------LFPSLKTCTFLLSSLVKAN 235
Query: 208 DISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAY 267
++ + V + + G + D FS + + + + + A ++E ++ Y
Sbjct: 236 ELKKSYEVYDFICLGG-IIPDVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTY 294
Query: 268 QFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-E 326
+I ++G L E YR + + + I+Y I L+ L+ + A KE E
Sbjct: 295 NNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSE 354
Query: 327 SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 386
G ++ V N +I Y K G + A ++++ +G PN+ T + ++ +
Sbjct: 355 LGFVPNEV-VYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIG 413
Query: 387 LAVDCLEKAIDTGRG 401
A + LE+ I GRG
Sbjct: 414 QAENVLEEMI--GRG 426
>gi|359477372|ref|XP_002280003.2| PREDICTED: pentatricopeptide repeat-containing protein At3g23020
[Vitis vinifera]
Length = 881
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 119/244 (48%), Gaps = 2/244 (0%)
Query: 156 FSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERV 215
S + FN ++ Y + EK +I M+ ++PD ++YN ++ LA+ + A+
Sbjct: 531 LSVLEFNVMIKAYGISNRYEKACQLIDSMENHGVLPDKFSYNSLIQILASADLPHKAKFY 590
Query: 216 IEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYG 275
+ +M+ + ++ +D + + S +++ G E AE KE+ N D+ Y LI +
Sbjct: 591 LMKMQ-ETQLVSDCIPYCAVISSFIKLGQLEMAEGLFKEMIGYNVQPDVVVYGILINAFA 649
Query: 276 QTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 335
GN+ E +LR A + Y ++I++ + L A++ +K ++ D+
Sbjct: 650 DVGNVREAVNYVNALRNAGLPMNAVIYNSLIKLYTKVGYLEEAQEAYKMLQASEVGPDVY 709
Query: 336 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 395
+N MI Y++ ++ AEE+ E +R+G D N ++ + Y R G +K A ++K
Sbjct: 710 SSNCMIDLYSERSMVKQAEEIFESLKRKG-DANEFSFAMMLCMYKRIGKLKEAFQIVQKM 768
Query: 396 IDTG 399
+ G
Sbjct: 769 RELG 772
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 131/291 (45%), Gaps = 7/291 (2%)
Query: 103 VQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFN 162
Q ID+ EN+ V LP+ +Y SL+ + KA+ L KM+E L +P+
Sbjct: 553 CQLIDSMENHGV-LPDK----FSYNSLIQILASADLPHKAKFYLMKMQETQLVSDCIPYC 607
Query: 163 SLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRD 222
++++ + K G E + +EM ++ PD Y + + A A V ++ A + ++
Sbjct: 608 AVISSFIKLGQLEMAEGLFKEMIGYNVQPDVVVYGILINAFADVGNVREAVNYVNALRNA 667
Query: 223 GRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 282
G + + +++L +Y + G E+A+ A K L+ D+ + +I LY + + +
Sbjct: 668 G-LPMNAVIYNSLIKLYTKVGYLEEAQEAYKMLQASEVGPDVYSSNCMIDLYSERSMVKQ 726
Query: 283 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 342
I+ SL+ + S+ M+ + + L A + ++ D+ N ++G
Sbjct: 727 AEEIFESLKRK-GDANEFSFAMMLCMYKRIGKLKEAFQIVQKMRELGLVTDLLSYNNVLG 785
Query: 343 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
YA +GR ++A + P+ T++ ++ G K AV LE
Sbjct: 786 FYAMDGRFKDAVGTFKEMIEAAIQPDDCTFKSLGVVLVKCGIPKQAVGKLE 836
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 93/421 (22%), Positives = 178/421 (42%), Gaps = 61/421 (14%)
Query: 22 EEALY--DRLFKKGSSD--------VSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLY 71
EEAL+ DR+ K+G V ++ +F K+++ W +G TLK + K
Sbjct: 248 EEALHWLDRMNKQGMEPDEVTMGVVVQTYKKAGEFKKAEQFFKNWSLGKTLKD--EGKTS 305
Query: 72 YP-ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGS 128
P A E+ + + + +D K + A + F + N +T+ +
Sbjct: 306 EPTATSAVESASQPHVCLSSYTYNTLIDTYGKAGQLREASDTFAWMLREGIIPNTVTFNT 365
Query: 129 LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS 188
+++ E+A +L++KM+EL + +N L++L+AK + ++ + ++MK +
Sbjct: 366 MIHICGNHGQLEEAASLMQKMEELRCPPDTRTYNILISLHAKHNNIDRAASYFKKMKEAR 425
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
+ PD +Y + A + + + AE ++ EM G + D T S L +Y+EAG+ +K+
Sbjct: 426 LEPDLVSYRTLLYAFSIRHLVGEAEILVSEMDERG-LEIDEFTQSALTRMYIEAGMLKKS 484
Query: 249 ERALKELE------------NRNAH-------------------RDLSAYQF--LITLYG 275
+ N +A+ R LS +F +I YG
Sbjct: 485 WLWFRRFHLEGNMSSECYSANIDAYGERGHILEAEKAFLCCKESRKLSVLEFNVMIKAYG 544
Query: 276 QTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF------KEWESGC 329
+ + ++ S+ SY ++IQ+L + DLP K + + S C
Sbjct: 545 ISNRYEKACQLIDSMENHGVLPDKFSYNSLIQILAS-ADLPHKAKFYLMKMQETQLVSDC 603
Query: 330 ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 389
Y +I ++ K G+LE AE L + P+ + I + + G+++ AV
Sbjct: 604 IPY-----CAVISSFIKLGQLEMAEGLFKEMIGYNVQPDVVVYGILINAFADVGNVREAV 658
Query: 390 D 390
+
Sbjct: 659 N 659
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/273 (19%), Positives = 114/273 (41%), Gaps = 36/273 (13%)
Query: 65 LRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQG-------IDAAENYFVDLP 117
L+++ + AL++ E ++K+G + IH +++ ++ G +++ + +
Sbjct: 170 LKEQSCWERALEIFEWLKKKGCYEL---NVIHYNIMLRILGKARKWHHVESLWDEMMSRG 226
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
T N TYG+L++ Y K +TE+A L++M + + + ++ Y K G +K
Sbjct: 227 ITPVNS-TYGTLIDVYSKGGLTEEALHWLDRMNKQGMEPDEVTMGVVVQTYKKAGEFKKA 285
Query: 178 ---------------------PAIIQEMKASS---IMPDSYTYNVWMRALAAVNDISGAE 213
P ++++S + SYTYN + + A
Sbjct: 286 EQFFKNWSLGKTLKDEGKTSEPTATSAVESASQPHVCLSSYTYNTLIDTYGKAGQLREAS 345
Query: 214 RVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITL 273
M R+G + + TF+ + I G E+A ++++E D Y LI+L
Sbjct: 346 DTFAWMLREG-IIPNTVTFNTMIHICGNHGQLEEAASLMQKMEELRCPPDTRTYNILISL 404
Query: 274 YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI 306
+ + N+ ++ ++ A +SY ++
Sbjct: 405 HAKHNNIDRAASYFKKMKEARLEPDLVSYRTLL 437
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 46/249 (18%), Positives = 87/249 (34%), Gaps = 28/249 (11%)
Query: 196 YNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 255
YN+ +R L E + +EM G + +T+ L +Y + GL E+A L +
Sbjct: 199 YNIMLRILGKARKWHHVESLWDEMMSRGITPVN-STYGTLIDVYSKGGLTEEALHWLDRM 257
Query: 256 ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDL 315
+ D ++ Y + G + + +++ L LKD
Sbjct: 258 NKQGMEPDEVTMGVVVQTYKKAGEFKKAEQFFKNWSLG----------------KTLKDE 301
Query: 316 -----PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
P A + N +I Y K G+L A + R G PN
Sbjct: 302 GKTSEPTATSAVESASQPHVCLSSYTYNTLIDTYGKAGQLREASDTFAWMLREGIIPNTV 361
Query: 371 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 430
T+ +G ++ A ++K + + P + T + + ++D A
Sbjct: 362 TFNTMIHICGNHGQLEEAASLMQKMEEL------RCPPDTRTYNILISLHAKHNNIDRAA 415
Query: 431 GFLEILKKA 439
+ + +K+A
Sbjct: 416 SYFKKMKEA 424
>gi|297737146|emb|CBI26347.3| unnamed protein product [Vitis vinifera]
Length = 862
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 119/244 (48%), Gaps = 2/244 (0%)
Query: 156 FSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERV 215
S + FN ++ Y + EK +I M+ ++PD ++YN ++ LA+ + A+
Sbjct: 512 LSVLEFNVMIKAYGISNRYEKACQLIDSMENHGVLPDKFSYNSLIQILASADLPHKAKFY 571
Query: 216 IEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYG 275
+ +M+ + ++ +D + + S +++ G E AE KE+ N D+ Y LI +
Sbjct: 572 LMKMQ-ETQLVSDCIPYCAVISSFIKLGQLEMAEGLFKEMIGYNVQPDVVVYGILINAFA 630
Query: 276 QTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 335
GN+ E +LR A + Y ++I++ + L A++ +K ++ D+
Sbjct: 631 DVGNVREAVNYVNALRNAGLPMNAVIYNSLIKLYTKVGYLEEAQEAYKMLQASEVGPDVY 690
Query: 336 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 395
+N MI Y++ ++ AEE+ E +R+G D N ++ + Y R G +K A ++K
Sbjct: 691 SSNCMIDLYSERSMVKQAEEIFESLKRKG-DANEFSFAMMLCMYKRIGKLKEAFQIVQKM 749
Query: 396 IDTG 399
+ G
Sbjct: 750 RELG 753
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 131/291 (45%), Gaps = 7/291 (2%)
Query: 103 VQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFN 162
Q ID+ EN+ V LP+ +Y SL+ + KA+ L KM+E L +P+
Sbjct: 534 CQLIDSMENHGV-LPDK----FSYNSLIQILASADLPHKAKFYLMKMQETQLVSDCIPYC 588
Query: 163 SLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRD 222
++++ + K G E + +EM ++ PD Y + + A A V ++ A + ++
Sbjct: 589 AVISSFIKLGQLEMAEGLFKEMIGYNVQPDVVVYGILINAFADVGNVREAVNYVNALRNA 648
Query: 223 GRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 282
G + + +++L +Y + G E+A+ A K L+ D+ + +I LY + + +
Sbjct: 649 G-LPMNAVIYNSLIKLYTKVGYLEEAQEAYKMLQASEVGPDVYSSNCMIDLYSERSMVKQ 707
Query: 283 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 342
I+ SL+ + S+ M+ + + L A + ++ D+ N ++G
Sbjct: 708 AEEIFESLKRK-GDANEFSFAMMLCMYKRIGKLKEAFQIVQKMRELGLVTDLLSYNNVLG 766
Query: 343 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
YA +GR ++A + P+ T++ ++ G K AV LE
Sbjct: 767 FYAMDGRFKDAVGTFKEMIEAAIQPDDCTFKSLGVVLVKCGIPKQAVGKLE 817
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 103/472 (21%), Positives = 183/472 (38%), Gaps = 69/472 (14%)
Query: 13 IAKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYY 72
+ K K H E+L+D + +G + V+ G + L
Sbjct: 206 LGKARKWHHVESLWDEMMSRGITPVNS-----------------TYGTLIDVYSKGGLTE 248
Query: 73 PALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVD--LPETSKNHL-----T 125
AL + M K+GM + + K AE +F + L S+ H+ T
Sbjct: 249 EALHWLDRMNKQGMEPDEVTMGVVVQTYKKAGEFKKAEQFFKNWSLESASQPHVCLSSYT 308
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y +L++ Y K +A M + +++ FN+++ + G E+ +++Q+M+
Sbjct: 309 YNTLIDTYGKAGQLREASDTFAWMLREGIIPNTVTFNTMIHICGNHGQLEEAASLMQKME 368
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
PD+ TYN+ + A N+I A ++MK + R+ D ++ L + L
Sbjct: 369 ELRCPPDTRTYNILISLHAKHNNIDRAASYFKKMK-EARLEPDLVSYRTLLYAFSIRHLV 427
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
+AE + E++ R D L +Y + G L + + +R L N ++ Y
Sbjct: 428 GEAEILVSEMDERGLEIDEFTQSALTRMYIEAGMLKKSWLWFRRFHLE-GNMSSECYSAN 486
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVT----NVMIGAYAKEGRLENAEELKERAR 361
I + AEK F C +++ NVMI AY R E A +L +
Sbjct: 487 IDAYGERGHILEAEKAFL-----CCKESRKLSVLEFNVMIKAYGISNRYEKACQLIDSME 541
Query: 362 RRGADPNAKTW----EIFSD---------YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVP 408
G P+ ++ +I + Y ++ + +L DC +P
Sbjct: 542 NHGVLPDKFSYNSLIQILASADLPHKAKFYLMKMQETQLVSDC---------------IP 586
Query: 409 SSETIRTFMRHFEQEKDVDGAEG-FLEILKKAVDDLGVEVFEPLIRTYAAAG 459
I +F++ + E AEG F E++ V V V+ LI +A G
Sbjct: 587 YCAVISSFIKLGQLEM----AEGLFKEMIGYNVQP-DVVVYGILINAFADVG 633
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 94/254 (37%), Gaps = 45/254 (17%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N + Y +L K E+L ++M + + + +L+ +Y+K G E+ +
Sbjct: 195 NVIHYNIMLRILGKARKWHHVESLWDEMMSRGITPVNSTYGTLIDVYSKGGLTEEALHWL 254
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M + PD T V + Y +
Sbjct: 255 DRMNKQGMEPDEVTMGV------------------------------------VVQTYKK 278
Query: 242 AGLFEKAERALKELENRNA---HRDLSAYQF--LITLYGQTGNLSEVYRI--WRSLRLAF 294
AG F+KAE+ K +A H LS+Y + LI YG+ G L E W
Sbjct: 279 AGEFKKAEQFFKNWSLESASQPHVCLSSYTYNTLIDTYGKAGQLREASDTFAWMLREGII 338
Query: 295 PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAE 354
PNT +++ MI + N L A ++ E D R N++I +AK ++ A
Sbjct: 339 PNT--VTFNTMIHICGNHGQLEEAASLMQKMEELRCPPDTRTYNILISLHAKHNNIDRAA 396
Query: 355 ELKERARRRGADPN 368
++ + +P+
Sbjct: 397 SYFKKMKEARLEPD 410
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 44/244 (18%), Positives = 88/244 (36%), Gaps = 37/244 (15%)
Query: 196 YNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 255
YN+ +R L E + +EM G + +T+ L +Y + GL E+A L +
Sbjct: 199 YNIMLRILGKARKWHHVESLWDEMMSRGITPVN-STYGTLIDVYSKGGLTEEALHWLDRM 257
Query: 256 ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDL 315
+ D ++ Y + G + + +++ L + ++
Sbjct: 258 NKQGMEPDEVTMGVVVQTYKKAGEFKKAEQFFKNWSLESASQPHV--------------- 302
Query: 316 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 375
C + TY N +I Y K G+L A + R G PN T+
Sbjct: 303 -----CLSSY-----TY-----NTLIDTYGKAGQLREASDTFAWMLREGIIPNTVTFNTM 347
Query: 376 SDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEI 435
+G ++ A ++K + + P + T + + ++D A + +
Sbjct: 348 IHICGNHGQLEEAASLMQKMEEL------RCPPDTRTYNILISLHAKHNNIDRAASYFKK 401
Query: 436 LKKA 439
+K+A
Sbjct: 402 MKEA 405
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 144/351 (41%), Gaps = 44/351 (12%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y L+ + E+A LL +M+E+ F +L+ A+ G E A++ E+K
Sbjct: 185 YTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVK 244
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
S + PD YNV + ++ A + E+K G + D +++++ + +AG
Sbjct: 245 GSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQG-LKPDDVSYTSMIWVLCKAGRL 303
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYL 303
+AE ++E A AY +I YG G Y++ L R P+ +S+
Sbjct: 304 SEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSV--VSFN 361
Query: 304 NMIQVLVNLKDLPGAEKCF----KEWESGCATYDIRV----------------------- 336
+++ L + + A F K+ E +TY+I +
Sbjct: 362 SILTCLGKKRKVDEALTLFEAMKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAG 421
Query: 337 -------TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 389
N+M+ K + E A E+ E A +RG +PN+ T+ D + G++ A
Sbjct: 422 LFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAY 481
Query: 390 DCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 440
E +DTG V + IR F H +E DG + F E+ ++
Sbjct: 482 RLFENMLDTGH--NANPVVYTSLIRNFFMHGRKE---DGHKIFKEMNRRGC 527
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 139/324 (42%), Gaps = 7/324 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A + + ME G+ + I +D + K + + A F + + N +TY SL++
Sbjct: 410 AYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLID 469
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMP--FNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
K+ + A L E M L+ G ++ P + SL+ + G E I +EM
Sbjct: 470 GLGKKGNVDDAYRLFENM--LDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGC 527
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
PD N +M + D+ + E++K G + D ++S L +AG +
Sbjct: 528 QPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLP-DVRSYSILIHGLTKAGQARETS 586
Query: 250 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 309
++ + D AY ++ + ++G L + Y + +++ +Y ++I L
Sbjct: 587 SIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGL 646
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
+ L A F+E +S ++ V + +I + K GR++ A + E ++G PN
Sbjct: 647 AKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNV 706
Query: 370 KTWEIFSDYYLRNGDMKLAVDCLE 393
TW D ++ ++ A+ C +
Sbjct: 707 YTWNSLMDALVKAEEINEALICFQ 730
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 96/230 (41%), Gaps = 1/230 (0%)
Query: 143 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 202
E +LE+M L G + L++ +T + +I M+ P Y V + A
Sbjct: 132 EKVLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGA 191
Query: 203 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 262
+A A ++ +M+ G F+ L G E A + E++
Sbjct: 192 MAEARQPERALELLRQMQEVG-YEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEP 250
Query: 263 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 322
D+ Y I +G+ GN+ ++ + L+ ++SY +MI VL L AE+ F
Sbjct: 251 DIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELF 310
Query: 323 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
+ E+ A N MI Y G+ ENA +L ++ + RG P+ ++
Sbjct: 311 GQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSF 360
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 95/221 (42%), Gaps = 3/221 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A ++ E M+ + + TV+ +D +AK+ +D A F + N + Y SL++
Sbjct: 620 AYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLID 679
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ K ++A +LE+M + L + +NSLM K + Q MK P
Sbjct: 680 GFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSP 739
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
++YTY++ + L V + A +EM++ G V + T++ + + + G A
Sbjct: 740 NTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLV-PNVVTYTTMIAGLAKVGNITDACSL 798
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL 292
+ + D +++ LI E Y ++ RL
Sbjct: 799 FERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRL 839
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/301 (19%), Positives = 120/301 (39%), Gaps = 4/301 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK-NHLTYGSLLNC 132
A KL + +++RG +V L + K + +D A F + + ++ N TY +++
Sbjct: 341 AYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAEPNSSTYNIIIDM 400
Query: 133 YCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPD 192
C E+A + ++M+ L + + N ++ K E + + P+
Sbjct: 401 LCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPN 460
Query: 193 SYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERAL 252
S TY + L ++ A R+ E M G A+ +++L + G E +
Sbjct: 461 SVTYCSLIDGLGKKGNVDDAYRLFENMLDTGH-NANPVVYTSLIRNFFMHGRKEDGHKIF 519
Query: 253 KELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI-SYLNMIQVLVN 311
KE+ R DL+ + + G++ + I+ ++ + ++ SY +I L
Sbjct: 520 KEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIK-GYGFLPDVRSYSILIHGLTK 578
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
F + D R N ++ + K G+L+ A E+ E + + P T
Sbjct: 579 AGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVAT 638
Query: 372 W 372
+
Sbjct: 639 Y 639
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 2/147 (1%)
Query: 79 ENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKE 136
E M K+G+ V +D + K + I+ A F + E S N TY L+N C+
Sbjct: 695 EEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRV 754
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 196
KA ++M++ L + + + +++ AK G+ ++ + KA+ PD+ ++
Sbjct: 755 QKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASF 814
Query: 197 NVWMRALAAVNDISGAERVIEEMKRDG 223
N + ++ N A V EE + G
Sbjct: 815 NALIEGMSHANRAIEAYHVFEETRLKG 841
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 127/287 (44%), Gaps = 3/287 (1%)
Query: 109 AENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMT 166
A F ++PE + NH+TY ++++ + K+ E L +M L + + +N L++
Sbjct: 207 AVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLS 266
Query: 167 LYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA 226
+ G + A++ EM + ++PD +TY++ + D + EE + G V
Sbjct: 267 GLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKG-VK 325
Query: 227 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
T S L + + G KAE L+ L N + Y LI Y Q G+L + I
Sbjct: 326 IGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSI 385
Query: 287 WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAK 346
++ ++ +I+Y +I L ++ + A E E + N +I AY +
Sbjct: 386 FQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGR 445
Query: 347 EGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
G+LE + + +G PN ++ + + +NG + AV L+
Sbjct: 446 AGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILD 492
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 118/265 (44%), Gaps = 3/265 (1%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
T LLN CK+ KAE +L+ + L +++ +N+L+ Y + G E +I Q+M
Sbjct: 330 TCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQM 389
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
K+ I PD TYN + L V I+ A ++ EM+++G V TF+ L Y AG
Sbjct: 390 KSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNG-VNPSVETFNTLIDAYGRAGQ 448
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
EK L +++ + ++ +Y ++ + + G + E I + + Y
Sbjct: 449 LEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNA 508
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+I + A ++ +S I N++I K+ ++ AEEL + R G
Sbjct: 509 IIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYG 568
Query: 365 ADPNAKTWE--IFSDYYLRNGDMKL 387
P+ ++ I + Y N D L
Sbjct: 569 LAPDVISYNTLISACCYRSNTDRAL 593
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 102/212 (48%), Gaps = 3/212 (1%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELM 138
MEK G+N +V +D + ++ D+ E N ++YGS++N +CK
Sbjct: 424 MEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGK 483
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
+A A+L+ M ++ + +N+++ Y + G ++ + ++MK+S + P TYN+
Sbjct: 484 ILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNL 543
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
++ L + IS AE +++ ++ G +A D +++ L S ++A KE+
Sbjct: 544 LIKGLCKQSQISEAEELLDSLRNYG-LAPDVISYNTLISACCYRSNTDRALELEKEMWKC 602
Query: 259 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
Y+ L + G G + E+ +++ +
Sbjct: 603 GIKPSPRTYRMLFSSLGGAGRVHEMENLYQQM 634
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 113/265 (42%), Gaps = 5/265 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+H+TY +L+N K +A L+ +M++ + S FN+L+ Y + G EK I+
Sbjct: 397 DHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIIL 456
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYV 240
+M+ + P+ +Y + A I A ++++M +D V ++ + Y+
Sbjct: 457 SDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKD--VLPGAQVYNAIIDAYI 514
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
E G ++A +++++ + Y LI + +SE + SLR I
Sbjct: 515 ECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVI 574
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKE-WESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
SY +I + A + KE W+ G R ++ + GR+ E L ++
Sbjct: 575 SYNTLISACCYRSNTDRALELEKEMWKCGIKPSP-RTYRMLFSSLGGAGRVHEMENLYQQ 633
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGD 384
+ P + + I D Y + G+
Sbjct: 634 MLDKDVVPCSGIYNIMVDAYAKCGE 658
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/334 (19%), Positives = 120/334 (35%), Gaps = 46/334 (13%)
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+ EM +++P+ TYN + D+ R+ +M R G + + T++ L S
Sbjct: 210 LFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHG-LKPNVITYNVLLSGL 268
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGN-------------------- 279
AG + L E+ +R D Y L + +TG+
Sbjct: 269 CRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGA 328
Query: 280 ---------------LSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 324
+S+ + ++L + + Y +I + DL GA F++
Sbjct: 329 YTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQ 388
Query: 325 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 384
+S D N +I K R+ A +L + G +P+ +T+ D Y R G
Sbjct: 389 MKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQ 448
Query: 385 MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE--ILKKAVDD 442
++ L + G P+ + + + F + + A L+ +K +
Sbjct: 449 LEKCFIILSDMQEKG------LKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLP- 501
Query: 443 LGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEV 476
G +V+ +I Y G T + KM+ V
Sbjct: 502 -GAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGV 534
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/249 (19%), Positives = 106/249 (42%), Gaps = 10/249 (4%)
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
PD++T+N ++A D+ A ++ M DG A + +++ + + +AG A +
Sbjct: 150 PDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVK 209
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW-RSLRLAF-PNTANISYLNMIQV 308
E+ + + Y +I + + G+L +R+W + LR PN I+Y ++
Sbjct: 210 LFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNV--ITYNVLLSG 267
Query: 309 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 368
L + E S D +++ +++ G + L E + ++G
Sbjct: 268 LCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIG 327
Query: 369 AKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDG 428
A T I + ++G + A + L+ +++G + ++ T + + Q D++G
Sbjct: 328 AYTCSILLNGLCKDGKISKAEEVLQTLVNSG------LLQTTVIYNTLINGYCQIGDLEG 381
Query: 429 AEGFLEILK 437
A + +K
Sbjct: 382 AFSIFQQMK 390
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 73/163 (44%), Gaps = 2/163 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A L+E M+ G+ ++ + + + K I AE L + + ++Y +L++
Sbjct: 522 AFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLIS 581
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C T++A L ++M + + S + L + G ++ + Q+M ++P
Sbjct: 582 ACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVP 641
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSN 234
S YN+ + A A + S E + +EM G D+T+ +N
Sbjct: 642 CSGIYNIMVDAYAKCGEESKVEALRKEMSDKGIAVGDYTSMTN 684
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 149/353 (42%), Gaps = 9/353 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A +L E M +G V I + + K+ +A ++ E + N +TY +LL+
Sbjct: 335 ATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLH 394
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C+ M + A A+L++M +S +N ++ K G ++ ++QEMK+ P
Sbjct: 395 SFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKP 454
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D TYN + L + + AE + + +G V A+ T++ L + +G +++ R
Sbjct: 455 DICTYNTIIYHLCNNDQMDEAEHIFGNLLEEG-VVANGITYNTLIHALLHSGRWQEGLRL 513
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
E+ D+ +Y LI + GN+ + + N SY +I L
Sbjct: 514 ANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCK 573
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+ A + KE + T DI N +I K G A L E+ P+ T
Sbjct: 574 AGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVT 633
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 424
+ I ++ + + A L+KA+ G VP+ T +++F ++
Sbjct: 634 YNILISWHCKVRLLDDASMLLDKAVS------GGIVPNERTWGMMVQNFVRQP 680
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/311 (20%), Positives = 126/311 (40%), Gaps = 40/311 (12%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TYG LL C+ ++A A+L ++ E+N+ N+++ G + + +
Sbjct: 286 VTYGFLLRGLCRTRQADEAYAMLGRVPEVNVVM----LNTVIRGCLAEGKLARATELYEM 341
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + PD +TYN+ M L + A R+++EM+ G A + T+S L + G
Sbjct: 342 MGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKG-CAPNIVTYSTLLHSFCRNG 400
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
+++ A L ++ + + Y +I G+ G L E R+ + ++ +Y
Sbjct: 401 MWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYN 460
Query: 304 NMIQVLVNLKDLPGAEKCFKE-------------------------WESGC--------- 329
+I L N + AE F W+ G
Sbjct: 461 TIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLH 520
Query: 330 -ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 388
D+ N +I A KEG ++ + L E +G PN ++ + + + G ++ A
Sbjct: 521 GCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDA 580
Query: 389 VDCLEKAIDTG 399
++ ++ ++ G
Sbjct: 581 LELSKEMLNQG 591
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 85/206 (41%), Gaps = 7/206 (3%)
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
A+++ M +PD+ Y + AL A ++ A +++EM G AAD TF+++
Sbjct: 201 ALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMG-CAADVNTFNDVVLG 259
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
G +A R + + + Y FL+ +T E Y + L
Sbjct: 260 LCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAM-----LGRVPEV 314
Query: 299 NISYLN-MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
N+ LN +I+ + L A + ++ S D+ N+++ K GR +A +
Sbjct: 315 NVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRML 374
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNG 383
+ +G PN T+ + RNG
Sbjct: 375 DEMEEKGCAPNIVTYSTLLHSFCRNG 400
>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
Length = 713
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 140/328 (42%), Gaps = 3/328 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
AL + E M+K G++ A+ +D A+ AA + D+ + +TY L++
Sbjct: 325 ALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVH 384
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+CK +KA +LE ++ L + + S++ Y K GH +K + +K + + P
Sbjct: 385 AFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRP 444
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+YN + LA + A +++EM +G V + +++ L Y AG EKA
Sbjct: 445 GVVSYNSLLSGLAKARQMENARLMLDEMLANG-VVPNERSYTALTEGYARAGDVEKAFGM 503
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
+ ++ N D+ AY L+ ++G + +++ + A I+Y M+
Sbjct: 504 FQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWAR 563
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+L A K+ + D I A + G E E R + + NA+T
Sbjct: 564 KGELSKARDLLKDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNART 623
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ +L D A+ C E+A +G
Sbjct: 624 YTTLIHGWLAAADPDQAISCYEQAKASG 651
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 116/309 (37%), Gaps = 15/309 (4%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
+ L+ YA+ G A + M+AS I P+ + Y + A A D+ GA EEM
Sbjct: 134 YGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEML 193
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
G + + F ++ S Y AG E AE ++ + N Y ++ Y Q GN+
Sbjct: 194 SQG-IQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNM 252
Query: 281 SEVYRIWRSL-RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE--SGCATYDIRVT 337
V + + F + Y ++ ++D EKC + C T
Sbjct: 253 ETVEALLAQMEEEGFQGNLGL-YTTVLNGFAEIRD---EEKCLSFFHRLKACGLSPTAAT 308
Query: 338 -NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 396
++ + K G + A ++ E + G PN + + D Y R GD A E +
Sbjct: 309 YGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMV 368
Query: 397 DTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYA 456
G P T + F + +D A G LE ++ +E + ++ Y
Sbjct: 369 SAG------LKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYV 422
Query: 457 AAGRTSPVM 465
G +
Sbjct: 423 KGGHIQKAL 431
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/326 (18%), Positives = 143/326 (43%), Gaps = 9/326 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLV---AKVQGIDAAENYFVDLPETS--KNHLTYGS 128
A+ +E M +G+ ++A+ ++ A +AAE++F + + Y S
Sbjct: 185 AVACTEEMLSQGIQL---NEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNS 241
Query: 129 LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS 188
++ YC+ E EALL +M+E + + +++ +A+ EK + +KA
Sbjct: 242 IVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACG 301
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
+ P + TY ++ +++ A ++EEM + G V+ + ++ + Y G F A
Sbjct: 302 LSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHG-VSPNKMIYAMIMDGYARGGDFTAA 360
Query: 249 ERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQV 308
+ +++ + D+ Y L+ + + G + + + +++ +Y +++
Sbjct: 361 FKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDG 420
Query: 309 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 368
V + A + F ++ + N ++ AK ++ENA + + G PN
Sbjct: 421 YVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPN 480
Query: 369 AKTWEIFSDYYLRNGDMKLAVDCLEK 394
+++ ++ Y R GD++ A ++
Sbjct: 481 ERSYTALTEGYARAGDVEKAFGMFQR 506
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/371 (20%), Positives = 154/371 (41%), Gaps = 12/371 (3%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N Y SL++ Y + E A A E+M + + F S+++ YA G+ E
Sbjct: 165 NVHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWF 224
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
++ KA +++P YN ++A ++ E ++ +M+ +G + ++ + + + E
Sbjct: 225 EKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEG-FQGNLGLYTTVLNGFAE 283
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
EK L+ + Y ++ L+ + GN+++ I + + +
Sbjct: 284 IRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMI 343
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y ++ D A K +++ S DI N+++ A+ K GR++ A + E +
Sbjct: 344 YAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQ 403
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
P +T+ D Y++ G ++ A++ ++ G P + + +
Sbjct: 404 ANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAG------LRPGVVSYNSLLSGLA 457
Query: 422 QEKDVDGAEGFL-EILKKAVDDLGVEVFEPLIRTYAAAGRTSPV--MLRRLKMEKVEVS- 477
+ + ++ A L E+L V + L YA AG M +R+K E + +
Sbjct: 458 KARQMENARLMLDEMLANGVVP-NERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDI 516
Query: 478 EASKKLLEAIC 488
A LL+A C
Sbjct: 517 VAYGALLKACC 527
>gi|115450907|ref|NP_001049054.1| Os03g0162900 [Oryza sativa Japonica Group]
gi|108706330|gb|ABF94125.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113547525|dbj|BAF10968.1| Os03g0162900 [Oryza sativa Japonica Group]
gi|222624238|gb|EEE58370.1| hypothetical protein OsJ_09514 [Oryza sativa Japonica Group]
Length = 823
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 131/278 (47%), Gaps = 9/278 (3%)
Query: 107 DAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMT 166
D E Y + LP+ +LTY SL++ + EKA L KM+ L +P++ +++
Sbjct: 483 DGMERYGI-LPD----YLTYSSLIHLMSTAKLPEKALYYLRKMQAAKLLIDCVPYSVVIS 537
Query: 167 LYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA 226
+AK G+ + + +EM S I D+Y Y++ + A A V D+ AE +K+ G +
Sbjct: 538 CFAKNGNLHMVDCLFREMITSGIQADTYVYSILIDAYAEVGDVQKAEAYFGLLKKAG-LC 596
Query: 227 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
T +++L +Y + +A++ K L++ NA +L A +I LY + E I
Sbjct: 597 ESATIYNSLIKLYTKVVYLAEAQKTYKLLKSLNADTNLYASNCMIDLYSDHCMVKEAREI 656
Query: 287 WRSLRLAFPNTAN-ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 345
+ +L++ AN S+ M+ + + A + K+ ++ N +I Y
Sbjct: 657 FENLKVT--GKANEFSHAMMVCLYKKIARFDEAHRISKKMQASGFLTQALSYNSVIQMYV 714
Query: 346 KEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
GR+E+A ++ ++ PN T++ ++ G
Sbjct: 715 SGGRMEDALKIFQKMLASNTPPNDATFKALKIILVKRG 752
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 99/429 (23%), Positives = 173/429 (40%), Gaps = 73/429 (17%)
Query: 80 NMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF----VDLPETSKNH-----LTYGSLL 130
+M KRG+ +I L + K + AE +F ++ K H TY +L+
Sbjct: 201 DMIKRGLLPDEITMSIVLQVHKKAGEYEKAELFFKRWSLESDVKMKGHPCYSLYTYNTLI 260
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
+ Y K EK +M + + + FN+++ ++ K E++ ++++ M+ +
Sbjct: 261 DTYGKAGQLEKVSDTFNQMLREGVSPNVVTFNTMIHVWGKHRRMEQVASLMRTMEEFQCL 320
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
PD+ TYN+ + +NDI AE +MK + + D + L Y G+ +A+
Sbjct: 321 PDTRTYNILISLYREINDIDVAEYYFRKMKAEN-LLPDVVSCRTLLYGYSIKGMVTEAQA 379
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPN---TANI-SYLNMI 306
LKE+ RN D + +Y G L + + + + +ANI ++
Sbjct: 380 LLKEMYERNMVIDEYTQSAVTRMYVDAGMLEQAWCWFEKFNYQLNSECFSANIDAFGERG 439
Query: 307 QVLVNLKDLPGAEKCF-----KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
+L+ AEK F ++ S C V NVMI AY +L+ A E+ +
Sbjct: 440 HILL-------AEKAFMCCIKRKMLSTC------VCNVMIKAYGLVEKLDEACEIADGME 486
Query: 362 RRGADPNAKTWEIF------------SDYYLR-----------------------NGDMK 386
R G P+ T+ + YYLR NG++
Sbjct: 487 RYGILPDYLTYSSLIHLMSTAKLPEKALYYLRKMQAAKLLIDCVPYSVVISCFAKNGNLH 546
Query: 387 LAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVE 446
+ VDCL + + T +V S + + + DV AE + +LKKA
Sbjct: 547 M-VDCLFREMITSGIQADTYVYS-----ILIDAYAEVGDVQKAEAYFGLLKKAGLCESAT 600
Query: 447 VFEPLIRTY 455
++ LI+ Y
Sbjct: 601 IYNSLIKLY 609
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 136/341 (39%), Gaps = 34/341 (9%)
Query: 95 IHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKEL 152
I + L ++ ID AE YF + + + ++ +LL Y + M +A+ALL++M E
Sbjct: 328 ILISLYREINDIDVAEYYFRKMKAENLLPDVVSCRTLLYGYSIKGMVTEAQALLKEMYER 387
Query: 153 NLGFSSMPFNSLMTLYAKTGHPEKIPAIIQ--------EMKASSI--------------- 189
N+ +++ +Y G E+ + E +++I
Sbjct: 388 NMVIDEYTQSAVTRMYVDAGMLEQAWCWFEKFNYQLNSECFSANIDAFGERGHILLAEKA 447
Query: 190 --------MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M + NV ++A V + A + + M+R G + D+ T+S+L +
Sbjct: 448 FMCCIKRKMLSTCVCNVMIKAYGLVEKLDEACEIADGMERYG-ILPDYLTYSSLIHLMST 506
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
A L EKA L++++ D Y +I+ + + GNL V ++R + +
Sbjct: 507 AKLPEKALYYLRKMQAAKLLIDCVPYSVVISCFAKNGNLHMVDCLFREMITSGIQADTYV 566
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I + D+ AE F + + N +I Y K L A++ + +
Sbjct: 567 YSILIDAYAEVGDVQKAEAYFGLLKKAGLCESATIYNSLIKLYTKVVYLAEAQKTYKLLK 626
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGD 402
AD N D Y + +K A + E TG+ +
Sbjct: 627 SLNADTNLYASNCMIDLYSDHCMVKEAREIFENLKVTGKAN 667
>gi|22773251|gb|AAN06857.1| Hypothetical protein [Oryza sativa Japonica Group]
Length = 769
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 131/278 (47%), Gaps = 9/278 (3%)
Query: 107 DAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMT 166
D E Y + LP+ +LTY SL++ + EKA L KM+ L +P++ +++
Sbjct: 483 DGMERYGI-LPD----YLTYSSLIHLMSTAKLPEKALYYLRKMQAAKLLIDCVPYSVVIS 537
Query: 167 LYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA 226
+AK G+ + + +EM S I D+Y Y++ + A A V D+ AE +K+ G +
Sbjct: 538 CFAKNGNLHMVDCLFREMITSGIQADTYVYSILIDAYAEVGDVQKAEAYFGLLKKAG-LC 596
Query: 227 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
T +++L +Y + +A++ K L++ NA +L A +I LY + E I
Sbjct: 597 ESATIYNSLIKLYTKVVYLAEAQKTYKLLKSLNADTNLYASNCMIDLYSDHCMVKEAREI 656
Query: 287 WRSLRLAFPNTAN-ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 345
+ +L++ AN S+ M+ + + A + K+ ++ N +I Y
Sbjct: 657 FENLKVT--GKANEFSHAMMVCLYKKIARFDEAHRISKKMQASGFLTQALSYNSVIQMYV 714
Query: 346 KEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
GR+E+A ++ ++ PN T++ ++ G
Sbjct: 715 SGGRMEDALKIFQKMLASNTPPNDATFKALKIILVKRG 752
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 99/429 (23%), Positives = 173/429 (40%), Gaps = 73/429 (17%)
Query: 80 NMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF----VDLPETSKNH-----LTYGSLL 130
+M KRG+ +I L + K + AE +F ++ K H TY +L+
Sbjct: 201 DMIKRGLLPDEITMSIVLQVHKKAGEYEKAELFFKRWSLESDVKMKGHPCYSLYTYNTLI 260
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
+ Y K EK +M + + + FN+++ ++ K E++ ++++ M+ +
Sbjct: 261 DTYGKAGQLEKVSDTFNQMLREGVSPNVVTFNTMIHVWGKHRRMEQVASLMRTMEEFQCL 320
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
PD+ TYN+ + +NDI AE +MK + + D + L Y G+ +A+
Sbjct: 321 PDTRTYNILISLYREINDIDVAEYYFRKMKAEN-LLPDVVSCRTLLYGYSIKGMVTEAQA 379
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPN---TANI-SYLNMI 306
LKE+ RN D + +Y G L + + + + +ANI ++
Sbjct: 380 LLKEMYERNMVIDEYTQSAVTRMYVDAGMLEQAWCWFEKFNYQLNSECFSANIDAFGERG 439
Query: 307 QVLVNLKDLPGAEKCF-----KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
+L+ AEK F ++ S C V NVMI AY +L+ A E+ +
Sbjct: 440 HILL-------AEKAFMCCIKRKMLSTC------VCNVMIKAYGLVEKLDEACEIADGME 486
Query: 362 RRGADPNAKTWEIF------------SDYYLR-----------------------NGDMK 386
R G P+ T+ + YYLR NG++
Sbjct: 487 RYGILPDYLTYSSLIHLMSTAKLPEKALYYLRKMQAAKLLIDCVPYSVVISCFAKNGNLH 546
Query: 387 LAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVE 446
+ VDCL + + T +V S + + + DV AE + +LKKA
Sbjct: 547 M-VDCLFREMITSGIQADTYVYS-----ILIDAYAEVGDVQKAEAYFGLLKKAGLCESAT 600
Query: 447 VFEPLIRTY 455
++ LI+ Y
Sbjct: 601 IYNSLIKLY 609
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 136/341 (39%), Gaps = 34/341 (9%)
Query: 95 IHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKEL 152
I + L ++ ID AE YF + + + ++ +LL Y + M +A+ALL++M E
Sbjct: 328 ILISLYREINDIDVAEYYFRKMKAENLLPDVVSCRTLLYGYSIKGMVTEAQALLKEMYER 387
Query: 153 NLGFSSMPFNSLMTLYAKTGHPEKIPAIIQ--------EMKASSI--------------- 189
N+ +++ +Y G E+ + E +++I
Sbjct: 388 NMVIDEYTQSAVTRMYVDAGMLEQAWCWFEKFNYQLNSECFSANIDAFGERGHILLAEKA 447
Query: 190 --------MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M + NV ++A V + A + + M+R G + D+ T+S+L +
Sbjct: 448 FMCCIKRKMLSTCVCNVMIKAYGLVEKLDEACEIADGMERYG-ILPDYLTYSSLIHLMST 506
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
A L EKA L++++ D Y +I+ + + GNL V ++R + +
Sbjct: 507 AKLPEKALYYLRKMQAAKLLIDCVPYSVVISCFAKNGNLHMVDCLFREMITSGIQADTYV 566
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I + D+ AE F + + N +I Y K L A++ + +
Sbjct: 567 YSILIDAYAEVGDVQKAEAYFGLLKKAGLCESATIYNSLIKLYTKVVYLAEAQKTYKLLK 626
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGD 402
AD N D Y + +K A + E TG+ +
Sbjct: 627 SLNADTNLYASNCMIDLYSDHCMVKEAREIFENLKVTGKAN 667
>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
Length = 892
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 150/325 (46%), Gaps = 7/325 (2%)
Query: 65 LRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KN 122
LR R A +L+ ++ + GM + +D + K + AE F + N
Sbjct: 310 LRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPN 369
Query: 123 HLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQ 182
+TY L++ CK M + A + ++M+E + + P+NSL+ Y + + + ++
Sbjct: 370 EVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLN 429
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
EM + P + +Y+ + L D++ A + EM R+G V+ + TF+ L S + +
Sbjct: 430 EMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNG-VSGNVYTFTTLISGFCKD 488
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY 302
G ++A R ++ + + + + +I Y + GN+ + ++++ + N +Y
Sbjct: 489 GNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTY 548
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYD-IRVTNVMIGAYAKEGRLENAEELKERAR 361
++I VL A++ + E+ C + +T +M G + KEGRL + + R
Sbjct: 549 RSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYG-FCKEGRLTETYHIWDEMR 607
Query: 362 RRGA--DPNAKTWEIFSDYYLRNGD 384
RG D + T +++ L +G+
Sbjct: 608 ARGVKLDLISFTVIVYAALKLHDGE 632
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 95/439 (21%), Positives = 180/439 (41%), Gaps = 54/439 (12%)
Query: 63 KKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS-- 120
K +DR+ + A +L M RG+ AI + + K +D A F + E
Sbjct: 344 KLCKDRR-FREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIR 402
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMP-------------------- 160
Y SL+N YC+ +A LL +M E L S+
Sbjct: 403 VTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMEL 462
Query: 161 ---------------FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 205
F +L++ + K G+ ++ + +M SS++P+ T+NV +
Sbjct: 463 HREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCR 522
Query: 206 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 265
V ++ A ++ ++M G ++T S ++ + + G KA+ + +LEN L+
Sbjct: 523 VGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAM-KAKEFVDDLENNCV--VLN 579
Query: 266 AYQFLITLYG--QTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 323
++ +YG + G L+E Y IW +R IS+ ++ + L D F+
Sbjct: 580 SFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFR 639
Query: 324 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
E + D MI ++KE + A ++ G PN T+ + ++ ++G
Sbjct: 640 EMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSG 699
Query: 384 DMKLA-VDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGF-LEILKKAVD 441
+ A + C E + G+++P+S T F+ E +++ A+ IL+ +
Sbjct: 700 YLSSAQILCEEMLV-------GRFLPNSFTYNCFLDFLANEGELEKAKVLHATILEGCLA 752
Query: 442 DLGVEVFEPLIRTYAAAGR 460
+ F LI+ + AG+
Sbjct: 753 N--TVTFNTLIKGFCKAGQ 769
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/296 (18%), Positives = 116/296 (39%), Gaps = 7/296 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ +TY +L+ +C+ E A + + M L+ S + ++ K GH +K +
Sbjct: 264 DEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLA 323
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+ ++P+ + N + L AER+ M G + + T++ L +
Sbjct: 324 CHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRG-LEPNEVTYAILIHSLCK 382
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G+ + A + + + Y LI Y Q N + + + + S
Sbjct: 383 RGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAAS 442
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I L DL A + +E + ++ +I + K+G ++ A L ++
Sbjct: 443 YSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMI 502
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 417
PN T+ + + Y R G+++ A ++ +D G P + T R+ +
Sbjct: 503 DSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRG------LTPDNYTYRSLI 552
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 32/169 (18%), Positives = 78/169 (46%), Gaps = 2/169 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+++ + +++ + KE +A +KM + + + L+ K+G+ +
Sbjct: 649 DNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILC 708
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+EM +P+S+TYN ++ LA ++ A +V+ +G A+ TF+ L + +
Sbjct: 709 EEMLVGRFLPNSFTYNCFLDFLANEGELEKA-KVLHATILEG-CLANTVTFNTLIKGFCK 766
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
AG + A ++ D +Y +I + G++++ +++W +
Sbjct: 767 AGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEM 815
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N TY L+ E EKA+ L + E L +++ FN+L+ + K G + ++
Sbjct: 719 NSFTYNCFLDFLANEGELEKAKVLHATILEGCLA-NTVTFNTLIKGFCKAGQIQGAIDLM 777
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
Q S PD +Y+ + L V DI+ A ++ EM G
Sbjct: 778 QNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKG 819
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 153/366 (41%), Gaps = 48/366 (13%)
Query: 113 FVDLPETS---KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYA 169
FV ETS N +TY ++++ YC E A+A+L MK + S + SL++
Sbjct: 243 FVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMC 302
Query: 170 KTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADW 229
K G E+ I +EM + P + YN + ++ A +EM + G ++
Sbjct: 303 KQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKG-ISPTM 361
Query: 230 TTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS 289
+T+++L ++AE +KE++ + D Y LI Y + N + + +
Sbjct: 362 STYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDE 421
Query: 290 LRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI-------- 341
+ + +Y +++ VL + A+ FK+ S D+ + N +I
Sbjct: 422 MLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSN 481
Query: 342 --GAY-------------------------AKEGRLENAEELKERARRRGADPNAKTWEI 374
GA+ +EG++E A EL + +RRG P+ ++
Sbjct: 482 VKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNT 541
Query: 375 FSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 434
Y R GD+K A + +DTG + P+ T ++ + ++ D AE E
Sbjct: 542 LISGYSRRGDIKDAFRVRNEMLDTG------FNPTVLTYNALVQGLCKNQEGDLAE---E 592
Query: 435 ILKKAV 440
+LK+ V
Sbjct: 593 LLKEMV 598
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 58/117 (49%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ +T+ +++ +C+E E+A L ++MK + + FN+L++ Y++ G + +
Sbjct: 500 DEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVR 559
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
EM + P TYN ++ L + AE +++EM G D T F+ + I
Sbjct: 560 NEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGI 616
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 85/200 (42%), Gaps = 3/200 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
A L + M G+ T L +++K + A++ F + + + + +L++
Sbjct: 415 AFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALID 474
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C + A LL+ M + + + FN++M + + G E+ + EMK I P
Sbjct: 475 GHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKP 534
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D ++N + + DI A RV EM G T++ L + + AE
Sbjct: 535 DHISFNTLISGYSRRGDIKDAFRVRNEMLDTG-FNPTVLTYNALVQGLCKNQEGDLAEEL 593
Query: 252 LKELENRNAHRDLSAYQFLI 271
LKE+ ++ D + Y LI
Sbjct: 594 LKEMVSKGMTPDDTTYFTLI 613
>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 819
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 121/281 (43%), Gaps = 6/281 (2%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
T+ N L YG C+ E+ + ++M E L + +N+L+ K+G E+
Sbjct: 488 TTSNALLYG-----LCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAF 542
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+ ++M PD+YTYN M+ LA + RV+ E K G V + T++ +
Sbjct: 543 KLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHG-VVPNIYTYALMLEG 601
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
Y A + A +L Y LI + + GN +E +++ ++R + +
Sbjct: 602 YCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPT 661
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+Y ++I + + A+ F+E + ++ +IG Y K G+++ E + +
Sbjct: 662 IFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQ 721
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
PN T+ I D Y + G+ K A L + I G
Sbjct: 722 EMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANG 762
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 139/339 (41%), Gaps = 12/339 (3%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TYG L+N K ++A ++L +M + FN+L+ Y++ G+ + + +
Sbjct: 312 VTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDD 371
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + P++ T+N ++ N + AE+V+E + + ++ + S + + ++
Sbjct: 372 MTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSN-VLSVNEDACSYVLHLLCKSS 430
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
F+ A + +K L RN + S L+ + G E +W L AN +
Sbjct: 431 KFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTS 490
Query: 304 NMIQVLVNLKDLPGAEKCF---KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
N +L L + E+ F KE D N +I K G++E A +LKE+
Sbjct: 491 N--ALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKM 548
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 420
++G P+ T+ G M L +A D G VP+ T + +
Sbjct: 549 MKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHG------VVPNIYTYALMLEGY 602
Query: 421 EQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
+D A L +L V+ LI ++ AG
Sbjct: 603 CNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAG 641
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
TY S+++ C + E+A+ + E+M+ L + + +L+ Y K G ++I +I+QE
Sbjct: 663 FTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQE 722
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M ++ I P+ TY + + + + A +++ EM +G ++ D T++ L Y +
Sbjct: 723 MTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANG-ISPDTVTYTVLQKGYCK 779
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 56/115 (48%), Gaps = 6/115 (5%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N Y +L+ YCK ++ E++L++M + + + + ++ Y K G+ ++ ++
Sbjct: 696 NVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLL 755
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLA 236
EM A+ I PD+ TY V + N++ E ++ D V + T++ L
Sbjct: 756 NEMIANGISPDTVTYTVLQKGYCKENELE------ETLQGDTAVPLEEITYTTLV 804
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 68/166 (40%), Gaps = 1/166 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY + +N YCK ++A L KM E + + + +N+L+ K+G E+ M
Sbjct: 243 TYATAINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRM 302
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ + P TY + + L A V+ EM G ++ F+ L Y G
Sbjct: 303 VENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEF-VFNALIDGYSRKGN 361
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
+ A R ++ + + + L+ + +T + + ++ L
Sbjct: 362 MDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYL 407
>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
Length = 676
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 146/335 (43%), Gaps = 8/335 (2%)
Query: 65 LRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK--- 121
L +R A + E M +G+ V +D + K+ ++ A F+ L ++S
Sbjct: 261 LCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKP 320
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N TY ++ YCKE +AE LL +M E L ++ + +L+ + K G ++ ++
Sbjct: 321 NVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELM 380
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+MK +P+ YTYN + I A +V+ G + D T++ L + + +
Sbjct: 381 NKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQG-LHLDKVTYTILITEHCK 439
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW-RSLRLAFPNTANI 300
G A K++ ++ H D+ Y +I +Y Q + + +++ + L + T
Sbjct: 440 QGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQ- 498
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+Y +MI L L A K F+ + GC I +I + KE RLE A L E
Sbjct: 499 TYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSI-TYGALISSLCKESRLEEARALFET 557
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
+ P T + Y R + +AV L++
Sbjct: 558 MLDKHLVPCDVTRVTLAYEYCRRDKITIAVSFLDR 592
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/319 (19%), Positives = 134/319 (42%), Gaps = 8/319 (2%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK-I 177
T N + Y + ++ C+ ++A +LE+M L + SL+ K G E+
Sbjct: 247 TPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAF 306
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
++ +K+SS P+ +TY V + ++ AE ++ M G +A + T++ L
Sbjct: 307 RLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQG-LAPNTNTYTTLIH 365
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
+ + G F++A + +++ ++ Y +I + + G + E Y++ R +
Sbjct: 366 GHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHL 425
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
++Y +I + A FK+ DI +I Y ++ ++E +++L
Sbjct: 426 DKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLF 485
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 417
++ G P +T+ Y R G + A+ E+ + G +P S T +
Sbjct: 486 DKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHG------CLPDSITYGALI 539
Query: 418 RHFEQEKDVDGAEGFLEIL 436
+E ++ A E +
Sbjct: 540 SSLCKESRLEEARALFETM 558
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 116/273 (42%), Gaps = 8/273 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+H ++ +L+ C+E E+A+ALL M S ++ + + G + +
Sbjct: 180 DHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLF 239
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+ M P+ Y+ W+ L + A V+EEM G + + T ++L +
Sbjct: 240 RRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKG-LKPNVYTHTSLIDGLCK 298
Query: 242 AGLFEKAERALKELENRNAHR-DLSAYQFLITLYGQTGNLSEVYRIWRSL---RLAFPNT 297
G E+A R +L ++++ ++ Y +I Y + G L+ + + LA PNT
Sbjct: 299 IGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLA-PNT 357
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
+Y +I A + + + +I N +IG + K+G+++ A ++
Sbjct: 358 N--TYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVL 415
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
A +G + T+ I + + G + A+D
Sbjct: 416 RMATSQGLHLDKVTYTILITEHCKQGHITCALD 448
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 46/282 (16%), Positives = 113/282 (40%), Gaps = 10/282 (3%)
Query: 133 YCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPD 192
+C++ L +M E+ + + +++ + + G+ ++ +++EM + P+
Sbjct: 226 FCRQGRFRNVTDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPN 285
Query: 193 SYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERAL 252
YT+ + L + + A R+ ++ + + T++ + Y + G +AE L
Sbjct: 286 VYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLL 345
Query: 253 KELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLV 310
+ + + + Y LI + + G+ + + ++L PN +Y +I
Sbjct: 346 GRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNI--YTYNAIIGGFC 403
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
+ A K + S D ++I + K+G + A +L ++ + P+
Sbjct: 404 KKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIH 463
Query: 371 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSET 412
T+ Y + M+ + +K + G VP+ +T
Sbjct: 464 TYTTIIAMYCQQRQMEQSQQLFDKCLSIG------LVPTKQT 499
>gi|168019209|ref|XP_001762137.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686541|gb|EDQ72929.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 513
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 137/307 (44%), Gaps = 21/307 (6%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
FN LM Y +T + MK +P ++NV M A + + AERV+ EMK
Sbjct: 104 FNMLMDAYGRTKQWTEAENTFHLMKKFQCLPTETSFNVLMAAYSRGGQLERAERVLHEMK 163
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
+ + T++ + ++G ++ AE +E++NR ++ + +I +YG+ +
Sbjct: 164 -ESNCSPGLVTYNTYLEVLNKSGSWQLAEDVFREMQNRGVPPAVNTFTLMINIYGKAHHS 222
Query: 281 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 340
++ +++S+R A + +Y +I + AE+ F E +S DI N +
Sbjct: 223 AKAEHLFQSMRKALCPPSLFTYTALINAHAREGNCVRAEEIFAELQSVGFVPDIYTYNAL 282
Query: 341 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG---DMKLAVDCLEKAID 397
+ AY++ G A+E+ E G + ++ I D + R G D + D ++K
Sbjct: 283 LEAYSRGGHPAGAKEVFETMLEAGVKADHVSYNILIDAFGRAGLISDAQAIYDSMKKV-- 340
Query: 398 TGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVE----VFEPLIR 453
+ P+ ++ + F + V AE F+ + ++ +GVE +F L+
Sbjct: 341 -------GFKPTMKSHILLLSAFVKAGRVTDAENFV----RRLESMGVEPDTFMFNSLLG 389
Query: 454 TYAAAGR 460
Y +GR
Sbjct: 390 AYGNSGR 396
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 132/297 (44%), Gaps = 3/297 (1%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELM 138
M+ RG+ V+ + +++ K AE+ F + + + TY +L+N + +E
Sbjct: 197 MQNRGVPPAVNTFTLMINIYGKAHHSAKAEHLFQSMRKALCPPSLFTYTALINAHAREGN 256
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
+AE + +++ + +N+L+ Y++ GHP + + M + + D +YN+
Sbjct: 257 CVRAEEIFAELQSVGFVPDIYTYNALLEAYSRGGHPAGAKEVFETMLEAGVKADHVSYNI 316
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
+ A IS A+ + + MK+ G + L S +V+AG AE ++ LE+
Sbjct: 317 LIDAFGRAGLISDAQAIYDSMKKVG-FKPTMKSHILLLSAFVKAGRVTDAENFVRRLESM 375
Query: 259 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 318
D + L+ YG +G + ++ ++ S++ + I+ +I V + A
Sbjct: 376 GVEPDTFMFNSLLGAYGNSGRMDKMESLYESMQGSVCKPDIITLNTLINVYAQGGYIERA 435
Query: 319 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 375
E+ F ES T D+ ++GAY+K + ++ G P+ T ++
Sbjct: 436 EEIFNSLESKGFTPDVMSWTSLMGAYSKRKLYRKCVSVYQKMLIAGCIPDRATAKVL 492
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 133/334 (39%), Gaps = 7/334 (2%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
+ L++ Y + +AE MK+ + FN LM Y++ G E+ ++ EMK
Sbjct: 104 FNMLMDAYGRTKQWTEAENTFHLMKKFQCLPTETSFNVLMAAYSRGGQLERAERVLHEMK 163
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
S+ P TYN ++ L AE V EM+ G V TF+ + +IY +A
Sbjct: 164 ESNCSPGLVTYNTYLEVLNKSGSWQLAEDVFREMQNRG-VPPAVNTFTLMINIYGKAHHS 222
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
KAE + + L Y LI + + GN I+ L+ +Y +
Sbjct: 223 AKAEHLFQSMRKALCPPSLFTYTALINAHAREGNCVRAEEIFAELQSVGFVPDIYTYNAL 282
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
++ GA++ F+ D N++I A+ + G + +A+ + + ++ G
Sbjct: 283 LEAYSRGGHPAGAKEVFETMLEAGVKADHVSYNILIDAFGRAGLISDAQAIYDSMKKVGF 342
Query: 366 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKD 425
P K+ + +++ G + A + + + G P + + + +
Sbjct: 343 KPTMKSHILLLSAFVKAGRVTDAENFVRRLESMGVE------PDTFMFNSLLGAYGNSGR 396
Query: 426 VDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
+D E E ++ +V + LI YA G
Sbjct: 397 MDKMESLYESMQGSVCKPDIITLNTLINVYAQGG 430
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 80/376 (21%), Positives = 150/376 (39%), Gaps = 42/376 (11%)
Query: 53 VFKWE-VGDTLKKLRDRKLYYPALKLSENMEKRGMNKT-VSDQAIHLDLVAKVQGIDAAE 110
V WE + +T+ + R ++ + A+ + E + + M K V + +D + + AE
Sbjct: 62 VGSWEDLMETVAEFRRQRKWRSAIVIYEWILQGSMFKPDVGCFNMLMDAYGRTKQWTEAE 121
Query: 111 NYFVDLP--ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNS----- 163
N F + + ++ L+ Y + E+AE +L +MKE N + +N+
Sbjct: 122 NTFHLMKKFQCLPTETSFNVLMAAYSRGGQLERAERVLHEMKESNCSPGLVTYNTYLEVL 181
Query: 164 ------------------------------LMTLYAKTGHPEKIPAIIQEMKASSIMPDS 193
++ +Y K H K + Q M+ + P
Sbjct: 182 NKSGSWQLAEDVFREMQNRGVPPAVNTFTLMINIYGKAHHSAKAEHLFQSMRKALCPPSL 241
Query: 194 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 253
+TY + A A + AE + E++ G V D T++ L Y G A+ +
Sbjct: 242 FTYTALINAHAREGNCVRAEEIFAELQSVGFV-PDIYTYNALLEAYSRGGHPAGAKEVFE 300
Query: 254 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL-RLAFPNTANISYLNMIQVLVNL 312
+ D +Y LI +G+ G +S+ I+ S+ ++ F T S++ ++ V
Sbjct: 301 TMLEAGVKADHVSYNILIDAFGRAGLISDAQAIYDSMKKVGFKPTMK-SHILLLSAFVKA 359
Query: 313 KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
+ AE + ES D + N ++GAY GR++ E L E + P+ T
Sbjct: 360 GRVTDAENFVRRLESMGVEPDTFMFNSLLGAYGNSGRMDKMESLYESMQGSVCKPDIITL 419
Query: 373 EIFSDYYLRNGDMKLA 388
+ Y + G ++ A
Sbjct: 420 NTLINVYAQGGYIERA 435
>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 662
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 115/280 (41%), Gaps = 36/280 (12%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
+ N Y SL++ ++ + ++++ + P NSL+ + K G E++
Sbjct: 149 THNLECYVSLVDVLALAKDVDRIRFICSEIRKFEFPMTVSPGNSLIKSFGKLGMVEELLW 208
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+ ++MK + I P YTYN M L + + AERV E M+ GR+ D T++ + Y
Sbjct: 209 VWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVME-SGRIKPDVVTYNTMIKGY 267
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
+AG +KA L+ +E + D
Sbjct: 268 CKAGQTQKALEKLRVMETKGLEAD-----------------------------------K 292
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
I+Y+ MIQ D ++E + +++IG KEG+L + E
Sbjct: 293 ITYMTMIQACYADSDFSSCVALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFEN 352
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
R+G+ PN + + D Y + G ++ A+ L + ID G
Sbjct: 353 MIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEG 392
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 129/300 (43%), Gaps = 8/300 (2%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLNCYCKELM 138
M++ G+ T+ ++ + +D+AE F ++ + +TY +++ YCK
Sbjct: 213 MKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDVVTYNTMIKGYCKAGQ 272
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLM-TLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 197
T+KA L M+ L + + +++ YA + + A+ QEM + + ++
Sbjct: 273 TQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCV-ALYQEMDEKGLQVPPHAFS 331
Query: 198 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 257
+ + L ++ V E M R G + ++ L Y + G E A R L + +
Sbjct: 332 LVIGGLCKEGKLNEGYAVFENMIRKGS-KPNVAIYTVLIDGYAKTGSVEDAIRLLHRMID 390
Query: 258 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 317
+ D+ Y ++ + G + E +++ R ++ Y ++I L +
Sbjct: 391 EGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDE 450
Query: 318 AEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA-RRRGADPNAKTWEIF 375
AE+ F+E E GC T D N +I A+ K G+++ A L +R G D T+ I
Sbjct: 451 AERLFEEMSEKGC-TRDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTYTIL 509
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 98/225 (43%), Gaps = 14/225 (6%)
Query: 34 SSDVSVRQQLNQ-FLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSD 92
SS V++ Q++++ L+ F +G K+ + + Y + ENM ++G V+
Sbjct: 309 SSCVALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGY----AVFENMIRKGSKPNVAI 364
Query: 93 QAIHLDLVAKVQGIDAAENYFVDLPETSKNH--LTYGSLLNCYCKELMTEKAEALLEKMK 150
+ +D AK ++ A + + N +TY ++N CK E+A + +
Sbjct: 365 YTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCR 424
Query: 151 ELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDIS 210
L +SM ++SL+ K G ++ + +EM DSY YN + A +
Sbjct: 425 FNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVD 484
Query: 211 GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE--KAERALK 253
A + + M+ + T++ L S G+F+ + E ALK
Sbjct: 485 EALALFKRMEEEEGCDQTVYTYTILIS-----GMFKEHRNEEALK 524
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 155/366 (42%), Gaps = 48/366 (13%)
Query: 113 FVDLPETS---KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYA 169
FV ETS N +TY ++++ YC E A+A+L MK + S + SL++
Sbjct: 243 FVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMC 302
Query: 170 KTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADW 229
K G E+ I +EM + P + YN + ++ A +EM + G ++
Sbjct: 303 KQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKG-ISPTM 361
Query: 230 TTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS 289
+T+++L ++AE +KE++ + D Y LI Y + N + + +
Sbjct: 362 STYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDE 421
Query: 290 LRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES----------------GCATYD 333
+ + +Y +++ VL + A+ FK+ S C+ +
Sbjct: 422 MLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSN 481
Query: 334 IR------------------VT-NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 374
++ VT N ++ + +EG++E A EL + +RRG P+ ++
Sbjct: 482 VKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNT 541
Query: 375 FSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 434
Y R GD+K A + +DTG + P+ T ++ + ++ D AE E
Sbjct: 542 LISGYSRRGDIKDAFRVRNEMLDTG------FNPTVLTYNALVQGLCKNQEGDLAE---E 592
Query: 435 ILKKAV 440
+LK+ V
Sbjct: 593 LLKEMV 598
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 58/117 (49%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ +T+ +++ +C+E E+A L ++MK + + FN+L++ Y++ G + +
Sbjct: 500 DEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVR 559
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
EM + P TYN ++ L + AE +++EM G D T F+ + I
Sbjct: 560 NEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGI 616
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 85/200 (42%), Gaps = 3/200 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
A L + M G+ T L +++K + A++ F + + + + +L++
Sbjct: 415 AFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALID 474
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C + A LL+ M + + + FN++M + + G E+ + EMK I P
Sbjct: 475 GHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKP 534
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D ++N + + DI A RV EM G T++ L + + AE
Sbjct: 535 DHISFNTLISGYSRRGDIKDAFRVRNEMLDTG-FNPTVLTYNALVQGLCKNQEGDLAEEL 593
Query: 252 LKELENRNAHRDLSAYQFLI 271
LKE+ ++ D + Y LI
Sbjct: 594 LKEMVSKGMTPDDTTYFTLI 613
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 161/389 (41%), Gaps = 46/389 (11%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
ALK E M + G+ V + +D KV +D + E + + + +L++
Sbjct: 314 ALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALID 373
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
YCK M E A +L+ MK + +S +N L+ + + ++ A++ +M + + P
Sbjct: 374 GYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSP 433
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ TYN + L + A R+ M +DG V D TF + G E+A +
Sbjct: 434 NLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVP-DQRTFCAFIDCLCKMGKVEQAHQV 492
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTANISYL------ 303
+ L+ ++A + Y LI Y + S+ + +++ + FPN+ + L
Sbjct: 493 FESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRK 552
Query: 304 -NMIQVLVNLKDLPG--------------AEKCFKEWE-------------SGCATYDIR 335
++ ++L D+ G E+ +E + SGC ++
Sbjct: 553 EGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQP-NVV 611
Query: 336 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 395
I AY ++GRL AEE+ + + G ++ +++ + Y G + A L +
Sbjct: 612 TYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRM 671
Query: 396 IDTGRGDGGKWVPSSETIRTFMRHFEQEK 424
DTG PS +T ++H EK
Sbjct: 672 FDTG------CEPSRQTYSILLKHLIFEK 694
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/390 (21%), Positives = 162/390 (41%), Gaps = 11/390 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
AL+L M++ G V + + +V A +F ++ E N TY L++
Sbjct: 279 ALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLID 338
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+CK ++ +L M E L S +PFN+L+ Y K G E ++ MK + + P
Sbjct: 339 YFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCP 398
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+S TYN + + A ++ +M + +++ + T++ L +A + + A R
Sbjct: 399 NSRTYNELICGFCRKKSMDRAMALLNKM-YENKLSPNLVTYNTLIHGLCKARVVDSAWRL 457
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
+ D + I + G + + ++++ SL+ Y +I
Sbjct: 458 HHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCK 517
Query: 312 LKDLPGAEKCFKEWE-SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
+ A FK GC I NV++ KEG++E+A L + + A P
Sbjct: 518 AEKFSDAHLLFKRMLFEGCFPNSITF-NVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVH 576
Query: 371 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 430
T+ I + LR D A L++ I +G P+ T F++ + ++ + AE
Sbjct: 577 TYTILIEEILRESDFDRANMFLDQMISSG------CQPNVVTYTAFIKAYCRQGRLLEAE 630
Query: 431 GFLEILKKAVDDLGVEVFEPLIRTYAAAGR 460
+ +K+ L +++ L+ Y G+
Sbjct: 631 EMVVKIKEEGILLDSFIYDVLVNAYGCIGQ 660
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 119/292 (40%), Gaps = 7/292 (2%)
Query: 101 AKVQGIDAAENYFVDLPET--SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSS 158
K+ + A+ YF L + + TY SL+ YCK A + E M + +
Sbjct: 201 CKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNE 260
Query: 159 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 218
+ + +L+ + + G ++ + +MK PD TY V + A V + A + EE
Sbjct: 261 VSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEE 320
Query: 219 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 278
M +G + + T++ L + + G ++ L + + + + LI Y + G
Sbjct: 321 MVENG-IEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRG 379
Query: 279 NLSEVYRIWRSLRL--AFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 336
+ + + S++L PN+ +Y +I K + A + + ++
Sbjct: 380 MMEDAICVLDSMKLNKVCPNSR--TYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVT 437
Query: 337 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 388
N +I K +++A L + G P+ +T+ F D + G ++ A
Sbjct: 438 YNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQA 489
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 85/206 (41%), Gaps = 3/206 (1%)
Query: 195 TYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE 254
+YN L+ I + ++M DG V + +F+ + + + + G A+
Sbjct: 157 SYNRLFMVLSRFGLIDELNCLFKDMLNDG-VEPNLISFNTMVNAHCKIGNVVVAKAYFCG 215
Query: 255 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 314
L D Y LI Y + L + Y+++ + +SY N+I +
Sbjct: 216 LMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGK 275
Query: 315 LPGA-EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 373
+ A E F+ E GC D+ V++ A+ + G+ A + E G +PN T+
Sbjct: 276 IDEALELFFQMKEDGCFP-DVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYT 334
Query: 374 IFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ DY+ + G M ++ L ++ G
Sbjct: 335 VLIDYFCKVGKMDEGMEMLSTMLEKG 360
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/336 (19%), Positives = 119/336 (35%), Gaps = 49/336 (14%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +++ +++N +CK A+A + + S + SL+ Y K +
Sbjct: 189 NLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVF 248
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+ M + + +Y + V I A + +MK DG D T++ L + + E
Sbjct: 249 EIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDG-CFPDVPTYTVLVAAFCE 307
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G +A + +E+ ++ Y LI + + G + E
Sbjct: 308 VGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDE------------------- 348
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
G E E G + + N +I Y K G +E+A + + +
Sbjct: 349 ---------------GMEMLSTMLEKGLVS-SVVPFNALIDGYCKRGMMEDAICVLDSMK 392
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
PN++T+ + R M A+ L K + K P+ T T +
Sbjct: 393 LNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYEN------KLSPNLVTYNTLIHGLC 446
Query: 422 QEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAA 457
+ + VD A ++ K + F P RT+ A
Sbjct: 447 KARVVDSAWRLHHLMIK-------DGFVPDQRTFCA 475
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 64/333 (19%), Positives = 131/333 (39%), Gaps = 33/333 (9%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS---KNHLTYGSLL 130
A+ L + M K TV I ++ + + D A N F+D +S N +TY + +
Sbjct: 559 AMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRA-NMFLDQMISSGCQPNVVTYTAFI 617
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
YC++ +AE ++ K+KE + S ++ L+ Y G + ++ M +
Sbjct: 618 KAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCE 677
Query: 191 PDSYTYNVWMRALA--------------------------AVNDISGAERVIEEMKRDGR 224
P TY++ ++ L + D + E+M G
Sbjct: 678 PSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGC 737
Query: 225 VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVY 284
V + T+S L + A R ++ + + L++ + G E
Sbjct: 738 V-PNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEAL 796
Query: 285 RIWRSLRLAFPNTANI-SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGA 343
R+ S+ + + + A++ SY ++ L + AE+ F+ S YD V V++
Sbjct: 797 RLLDSM-MEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDG 855
Query: 344 YAKEGRLENAEELKERARRRGADPNAKTWEIFS 376
++G ++ +L++ + G ++ T + S
Sbjct: 856 LVRKGYVDECSQLRDIMEKTGCRLHSDTHTMLS 888
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/415 (21%), Positives = 164/415 (39%), Gaps = 46/415 (11%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL L M +RG V + +D + K +D A ++ E + + + + +L+
Sbjct: 309 ALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIG 368
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
YCK M E A +L M+ + + +N L+ + + ++ A++ +M S + P
Sbjct: 369 SYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSP 428
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D TYN + L V + A R+ M RDG W TF+ G +A +
Sbjct: 429 DVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQW-TFNAFMVCLCRMGRVGEAHQI 487
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
L+ L+ ++ + AY LI Y + G + +++ +
Sbjct: 488 LESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRML-------------------- 527
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
AE+C + NVMI KEG++++A L E + P T
Sbjct: 528 ------AEECLPNSIT---------FNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHT 572
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG 431
+ I + L+ D A + L + I +G + P+ T F++ + + ++ AE
Sbjct: 573 YNILVEEVLKEYDFDRANEILNRLISSG------YQPNVVTYTAFIKAYCSQGRLEEAEE 626
Query: 432 FLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPV--MLRRLKMEKVEVSEASKKLL 484
+ +K L ++ LI Y G +LRR+ E S + +L
Sbjct: 627 MVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSIL 681
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 74/384 (19%), Positives = 148/384 (38%), Gaps = 32/384 (8%)
Query: 106 IDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLM 165
++ A F +P +N ++Y +L++ C+ +A +M+E + + L+
Sbjct: 240 VERACGVFCVMPR--RNAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLV 297
Query: 166 TLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRV 225
++G + ++ EM+ P+ YTY V + L + A +++ EM G V
Sbjct: 298 CALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKG-V 356
Query: 226 AADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 285
A F+ L Y + G+ E A L +E++ ++ Y LI + + ++
Sbjct: 357 APSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMA 416
Query: 286 IWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 345
+ + + + ++Y +I L + + A + F+ + D N +
Sbjct: 417 LLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLC 476
Query: 346 KEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK---------LAVDCLEKA- 395
+ GR+ A ++ E + + N + D Y + G ++ LA +CL +
Sbjct: 477 RMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSI 536
Query: 396 -----IDTGRGDG------------GKW--VPSSETIRTFMRHFEQEKDVDGAEGFLEIL 436
ID R +G K+ P+ T + +E D D A L L
Sbjct: 537 TFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRL 596
Query: 437 KKAVDDLGVEVFEPLIRTYAAAGR 460
+ V + I+ Y + GR
Sbjct: 597 ISSGYQPNVVTYTAFIKAYCSQGR 620
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 114/312 (36%), Gaps = 56/312 (17%)
Query: 147 EKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM---KASSIMPDSYTYNVWMRAL 203
+ +L S +N L+ ++ +++ ++ +EM +S+ P+ T N + +
Sbjct: 140 DHQHQLAFKLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSY 199
Query: 204 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 263
+ +++ A + R D T+++L Y E+A + RNA
Sbjct: 200 CKLGNMAVARLFFVRILR-CEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRRNA--- 255
Query: 264 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 323
+Y LI + G L E W +R
Sbjct: 256 -VSYTNLIHGLCEAGKLHEALEFWARMR-------------------------------- 282
Query: 324 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
E GC +R V++ A + GR A L R RG +PN T+ + DY + G
Sbjct: 283 --EDGCFP-TVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEG 339
Query: 384 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDL 443
M A+ L + ++ +G VP + I ++ + E D G G +E K
Sbjct: 340 RMDEALKMLNEMVE--KGVAPSVVPFNALIGSYCKRGMME-DAVGVLGLMESKKVC---- 392
Query: 444 GVEVFEPLIRTY 455
P +RTY
Sbjct: 393 ------PNVRTY 398
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 92/231 (39%), Gaps = 31/231 (13%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
A+ L E+M K + T+ I ++ V K D A L + N +TY + +
Sbjct: 554 AMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIK 613
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
YC + E+AE ++ K+K + S +N L+ Y G + +++ M + P
Sbjct: 614 AYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEP 673
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDG-----------RVAADWTTFSNLASIYV 240
TY++ M+ L VIE+ K++G ++ D T + +
Sbjct: 674 SYLTYSILMKHL-----------VIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGI 722
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 291
LFEK +L+ Y LI + G L+ + ++ +R
Sbjct: 723 TTVLFEKMAEC-------GCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMR 766
>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 730
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 148/370 (40%), Gaps = 43/370 (11%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEM 184
Y SL++ + ++A E+MKE S + +N ++ LY K G E I + +EM
Sbjct: 120 YTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWENILELFEEM 179
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
KA I PD YTYN + A A+ + A + +MK D T++ L +Y +AG
Sbjct: 180 KAQGIQPDEYTYNTAITACASGSLCEEATELFTQMK-SSNCTPDRVTYNALLDVYGKAGW 238
Query: 245 FEKAERALKELE-----------------------------------NRNAHRDLSAYQF 269
+ +A LKE+E ++ D+ Y
Sbjct: 239 YNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTS 298
Query: 270 LITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGC 329
L++ Y + G + + I+ +R + + ++ +I + K+ F++ ++
Sbjct: 299 LLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACG 358
Query: 330 ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 389
DI N ++GA+ K G ++ ++ G +P+ T+ I + Y R G A+
Sbjct: 359 VEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQAL 418
Query: 390 DCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFE 449
+ + G P T T + +E + AE L+ L ++ +
Sbjct: 419 SIYDGMLQAG------CTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYA 472
Query: 450 PLIRTYAAAG 459
++ YA G
Sbjct: 473 SMLHAYANGG 482
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 97/206 (47%), Gaps = 3/206 (1%)
Query: 99 LVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGF 156
+ +K +D AE+ F+ + + T+ ++++ Y K+ M +KA ++ L
Sbjct: 512 VYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEP 571
Query: 157 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
+ +N LM +Y + G K A ++E A+ PD +YN + + + +S A R+
Sbjct: 572 DVVTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIF 631
Query: 217 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 276
EM +G + D T++ YV G+F +A +K + D Y+ L+ Y +
Sbjct: 632 HEMVSNG-IQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAYCK 690
Query: 277 TGNLSEVYRIWRSLRLAFPNTANISY 302
G EV RI + ++ + PN + +Y
Sbjct: 691 IGKFEEVERILKFIKSSDPNFSKAAY 716
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 100/439 (22%), Positives = 182/439 (41%), Gaps = 60/439 (13%)
Query: 66 RDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK---- 121
R+RK + AL E M++ G ++ + +DL K +G + EN ++L E K
Sbjct: 129 RNRK-FKEALGFFEQMKEAGPQPSLVTYNVIIDLYGK-KG-RSWEN-ILELFEEMKAQGI 184
Query: 122 --NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
+ TY + + + E+A L +MK N + +N+L+ +Y K G +
Sbjct: 185 QPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEAAN 244
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+++EM+++ +P+ TYN + A + A + + M G + D T+++L S Y
Sbjct: 245 VLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKG-IEPDVFTYTSLLSAY 303
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI------------- 286
AG E+A ++ N + + LI ++G+ N SE+ I
Sbjct: 304 SRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDI 363
Query: 287 --WRSLRLAFPNTANISYLNMIQVLVNLKD-------------LPGAEKCFKE------- 324
W SL AF N Y +++V +K + +C
Sbjct: 364 VTWNSLLGAFGK--NGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIY 421
Query: 325 ---WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 381
++GC T D+ N ++ A A+EGR E+AE + + R PN + Y
Sbjct: 422 DGMLQAGC-TPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYAN 480
Query: 382 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSET-IRTFMRHFEQEKDVDGAEGFLEILKKAV 440
G+++ L++ +DT +VP ++ ++TF+ + + VD AE ++
Sbjct: 481 GGELEK----LKEMVDTLH---TIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHG 533
Query: 441 DDLGVEVFEPLIRTYAAAG 459
F +I Y G
Sbjct: 534 YLSDTSTFNAMISMYGKKG 552
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 127/314 (40%), Gaps = 7/314 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL--PETSKNHLTYGSLLN 131
A ++ ++M +G+ V L ++ ++ A + + + N T+ +L+
Sbjct: 277 AAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIG 336
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ K + + E M+ + + +NSL+ + K G ++ + + MK + P
Sbjct: 337 MHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEP 396
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D T+N+ + A A + + M + G D TF+ L + G +E AE
Sbjct: 397 DKATFNILIEAYGRCGSSDQALSIYDGMLQAG-CTPDLATFNTLLAALAREGRWEHAELI 455
Query: 252 LKELENRNAHR--DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 309
L EL NR++++ D+ AY ++ Y G L ++ + +L + I + V
Sbjct: 456 LDEL-NRSSYKPNDI-AYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVY 513
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
+ AE F D N MI Y K+G ++ A + R G +P+
Sbjct: 514 SKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDV 573
Query: 370 KTWEIFSDYYLRNG 383
T+ Y R G
Sbjct: 574 VTYNCLMGMYGREG 587
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 126/316 (39%), Gaps = 3/316 (0%)
Query: 70 LYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYG 127
+Y LK+ M+K G + I ++ + D A + + + + + + T+
Sbjct: 378 MYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFN 437
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 187
+LL +E E AE +L+++ + + + + S++ YA G EK+ ++ +
Sbjct: 438 TLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGELEKLKEMVDTLHTI 497
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
+ ++ + + + AE M+ G ++ D +TF+ + S+Y + G+ +K
Sbjct: 498 YVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLS-DTSTFNAMISMYGKKGMMDK 556
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 307
A L + D+ Y L+ +YG+ G + R A +SY +I
Sbjct: 557 ATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVSYNTVIF 616
Query: 308 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
L A + F E S D N +G Y G A + + + G P
Sbjct: 617 SYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKP 676
Query: 368 NAKTWEIFSDYYLRNG 383
+ T+ D Y + G
Sbjct: 677 DEVTYRTLVDAYCKIG 692
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/350 (20%), Positives = 136/350 (38%), Gaps = 40/350 (11%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+T+ SLL + K M + + MK+ FN L+ Y + G ++ +I
Sbjct: 364 VTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDG 423
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR------DGRVAADWTTFSN--- 234
M + PD T+N + ALA AE +++E+ R D A+ ++N
Sbjct: 424 MLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGE 483
Query: 235 ----------LASIYV---------------EAGLFEKAERALKELENRNAHRDLSAYQF 269
L +IYV + L ++AE A + + D S +
Sbjct: 484 LEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNA 543
Query: 270 LITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGC 329
+I++YG+ G + + + LR ++Y ++ + E +E +
Sbjct: 544 MISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAG 603
Query: 330 ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 389
T D+ N +I +Y+K G+L +A + G P++ T+ F Y+ G A+
Sbjct: 604 QTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEAL 663
Query: 390 DCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 439
++ TG P T RT + + + + E L+ +K +
Sbjct: 664 SVVKHMHKTG------CKPDEVTYRTLVDAYCKIGKFEEVERILKFIKSS 707
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 3/190 (1%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELM 138
M G S + + K +D A + F L T + +TY L+ Y +E M
Sbjct: 529 MRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGM 588
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
K EA L + + +N+++ Y+K G I EM ++ I PDS+TYN
Sbjct: 589 YRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNT 648
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
++ A V++ M + G D T+ L Y + G FE+ ER LK +++
Sbjct: 649 FVGCYVNGGMFPEALSVVKHMHKTG-CKPDEVTYRTLVDAYCKIGKFEEVERILKFIKSS 707
Query: 259 NAHRDLSAYQ 268
+ + +AY+
Sbjct: 708 DPNFSKAAYR 717
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 97/238 (40%), Gaps = 20/238 (8%)
Query: 145 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 204
L + ++E + SL++ ++ ++ ++MK + P TYNV
Sbjct: 104 LFKSLREEGYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNV------ 157
Query: 205 AVNDISGAE--------RVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 256
+ D+ G + + EEMK G + D T++ + L E+A +++
Sbjct: 158 -IIDLYGKKGRSWENILELFEEMKAQG-IQPDEYTYNTAITACASGSLCEEATELFTQMK 215
Query: 257 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKD 314
+ N D Y L+ +YG+ G +E + + + A PN ++Y ++
Sbjct: 216 SSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPNI--VTYNELLSAFGRAGL 273
Query: 315 LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
A + S D+ ++ AY++ G++E A E+ + R PN+ T+
Sbjct: 274 CNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTF 331
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 104/279 (37%), Gaps = 20/279 (7%)
Query: 138 MTEKAEALLEKM---------------KELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQ 182
+TE E LL K+ E NL SS S+M + G K +
Sbjct: 13 LTESGEELLRKIVVLPNDECVSSVLTTSEPNL--SSSELLSIMKGLGREGQWNKALEVFN 70
Query: 183 EMKAS-SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M+ S + PD T V +R L + ++ R+ + ++ +G D +++L S
Sbjct: 71 WMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRLFKSLREEG-YPLDVYAYTSLISALSR 129
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE-VYRIWRSLRLAFPNTANI 300
F++A ++++ L Y +I LYG+ G E + ++ ++
Sbjct: 130 NRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWENILELFEEMKAQGIQPDEY 189
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
+Y I + A + F + +S T D N ++ Y K G A + +
Sbjct: 190 TYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEM 249
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
G PN T+ + R G A + + + G
Sbjct: 250 ESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKG 288
>gi|302794005|ref|XP_002978767.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
gi|300153576|gb|EFJ20214.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
Length = 521
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 152/350 (43%), Gaps = 18/350 (5%)
Query: 97 LDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNL 154
+D K I+ AE F + E N T+G L+N Y EKAE L +M++
Sbjct: 111 IDAYGKSLNIEDAEKTFNRMQEALCVPNEETFGVLINGYRLAGSFEKAEELFVQMQKRGY 170
Query: 155 GFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAER 214
+ N+ + + + A+ ++++ P+ TYN + + S AE
Sbjct: 171 SPGPLACNTFLHVLEDAKEYRRAEALFRDLEKYECEPNIDTYNRMIVIYGKAGEPSKAEM 230
Query: 215 VIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLY 274
+ M+R + TF+ L + + GL+ +AER +L+ + D AY L+ Y
Sbjct: 231 LYRSMRR-AMCPPNICTFTALMNAFARQGLYREAERYFDKLQEFDYKPDHYAYNALMEAY 289
Query: 275 GQTGNLSEVYRIWRSLRL--AFPNTANISYLNMIQVLVNLKDLPG----AEKCFKEWESG 328
Q G+ + I+++++ FP+T + + +L+N G AEK FK +S
Sbjct: 290 SQGGSPAGALEIFQTMQRNGCFPDTVSHN------ILINAYGRAGLYEDAEKIFKSMQSA 343
Query: 329 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 388
+ +++ +++ AYA+ GR+E AEEL R G P+ + + Y +G +
Sbjct: 344 GFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNALINAYGVSGRHEDM 403
Query: 389 VDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 438
L K + + + P T T ++ + Q + AE + L +
Sbjct: 404 EALLAKMV---KSSSKQTKPDIGTYNTLIQVYAQAGFIPKAEELFQGLAR 450
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 138/336 (41%), Gaps = 7/336 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP--ETSKNHLTYGSLLN 131
A +L M+KRG + L ++ + AE F DL E N TY ++
Sbjct: 158 AEELFVQMQKRGYSPGPLACNTFLHVLEDAKEYRRAEALFRDLEKYECEPNIDTYNRMIV 217
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
Y K KAE L M+ + F +LM +A+ G + +++ P
Sbjct: 218 IYGKAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDKLQEFDYKP 277
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D Y YN M A + +GA + + M+R+G D + + L + Y AGL+E AE+
Sbjct: 278 DHYAYNALMEAYSQGGSPAGALEIFQTMQRNG-CFPDTVSHNILINAYGRAGLYEDAEKI 336
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY---LNMIQV 308
K +++ +L + L++ Y + G + E + ++ + Y +N V
Sbjct: 337 FKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNALINAYGV 396
Query: 309 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 368
+D+ + S DI N +I YA+ G + AEEL + R P+
Sbjct: 397 SGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPKAEELFQGLARLKLVPD 456
Query: 369 AKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG-RGDG 403
A TW Y + + L+K +++G R D
Sbjct: 457 ATTWTALMGGYAKKKLYRKCTSILKKMLESGCRADA 492
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 91/250 (36%), Gaps = 42/250 (16%)
Query: 138 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE----MKASSIMPDS 193
M E A A+ + L G + +++ M++ + + P + Q ++ ++ PD
Sbjct: 47 MQEDATAIWNALDNLPRGHDT--WDNFMSVVVHFWNYKDWPRVTQMCEWVLQGTAFRPDL 104
Query: 194 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 253
YN+ + A +I AE+ M+ + + TF L + Y AG FEKAE
Sbjct: 105 GCYNLLIDAYGKSLNIEDAEKTFNRMQ-EALCVPNEETFGVLINGYRLAGSFEKAEELFV 163
Query: 254 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLK 313
+++ R P N + VL + K
Sbjct: 164 QMQKRGYSPG-------------------------------PLACN----TFLHVLEDAK 188
Query: 314 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 373
+ AE F++ E +I N MI Y K G AE L RR PN T+
Sbjct: 189 EYRRAEALFRDLEKYECEPNIDTYNRMIVIYGKAGEPSKAEMLYRSMRRAMCPPNICTFT 248
Query: 374 IFSDYYLRNG 383
+ + R G
Sbjct: 249 ALMNAFARQG 258
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 67/164 (40%), Gaps = 12/164 (7%)
Query: 304 NMIQVLV---NLKDLPGAEKCFKEWESGCATY--DIRVTNVMIGAYAKEGRLENAEELKE 358
N + V+V N KD P + EW + D+ N++I AY K +E+AE+
Sbjct: 70 NFMSVVVHFWNYKDWPRVTQ-MCEWVLQGTAFRPDLGCYNLLIDAYGKSLNIEDAEKTFN 128
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 418
R + PN +T+ + + Y G + A + + G + P TF+
Sbjct: 129 RMQEALCVPNEETFGVLINGYRLAGSFEKAEELFVQMQKRG------YSPGPLACNTFLH 182
Query: 419 HFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTS 462
E K+ AE L+K + ++ + +I Y AG S
Sbjct: 183 VLEDAKEYRRAEALFRDLEKYECEPNIDTYNRMIVIYGKAGEPS 226
>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59900
gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 149/348 (42%), Gaps = 11/348 (3%)
Query: 58 VGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP 117
V ++ LR R AL L + + G++ + +D + K + AE F +
Sbjct: 335 VSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMG 394
Query: 118 ETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
+ N +TY L++ +C+ + A + L +M + L S P+NSL+ + K G
Sbjct: 395 KIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDIS 454
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
+ EM + P TY M + I+ A R+ EM G +A TF+ L
Sbjct: 455 AAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKG-IAPSIYTFTTL 513
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLA 293
S AGL A + E+ N + Y +I Y + G++S+ + + + +
Sbjct: 514 LSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGI 573
Query: 294 FPNTANISYLNMIQVLVNLKDLPGAEKCFKE--WESGCATYDIRVTNVMIGAYAKEGRLE 351
P+T SY +I L L K F + + C +I T ++ G + +EG+LE
Sbjct: 574 VPDT--YSYRPLIHGLC-LTGQASEAKVFVDGLHKGNCELNEICYTGLLHG-FCREGKLE 629
Query: 352 NAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
A + + +RG D + + + D L++ D KL L++ D G
Sbjct: 630 EALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRG 677
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 104/493 (21%), Positives = 174/493 (35%), Gaps = 139/493 (28%)
Query: 12 NIAKRSKKHLEEALYDRLFKKG--SSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRK 69
++ K K H E L+DR+ K G +DV+ ++ F + K DT
Sbjct: 376 SLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKL-------DT-------- 420
Query: 70 LYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL--PETSKNHLTYG 127
AL M G+ +V ++ K I AAE + ++ + +TY
Sbjct: 421 ----ALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYT 476
Query: 128 SLLNCYC------KEL-----MTEKAEA------------------------LLEKMKEL 152
SL+ YC K L MT K A L +M E
Sbjct: 477 SLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEW 536
Query: 153 NLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA 212
N+ + + +N ++ Y + G K ++EM I+PD+Y+Y + L S A
Sbjct: 537 NVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA 596
Query: 213 ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI- 271
+ ++ + + G + ++ L + G E+A +E+ R DL Y LI
Sbjct: 597 KVFVDGLHK-GNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLID 655
Query: 272 ---------TLYG-------------------------QTGNLSEVYRIWRSL--RLAFP 295
+G +TG+ E + IW + P
Sbjct: 656 GSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVP 715
Query: 296 N----TANIS------YLNMIQVLVN----LKDLPG--AEKCF----------------- 322
N TA I+ ++N +VL + + +P CF
Sbjct: 716 NEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVEL 775
Query: 323 -----KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 377
K + ATY N++I + ++GR+E A EL R G P+ T+ +
Sbjct: 776 HNAILKGLLANTATY-----NMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMIN 830
Query: 378 YYLRNGDMKLAVD 390
R D+K A++
Sbjct: 831 ELCRRNDVKKAIE 843
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/383 (18%), Positives = 147/383 (38%), Gaps = 9/383 (2%)
Query: 80 NMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP--ETSKNHLTYGSLLNCYCKEL 137
+ME G + + + +D + K Q + A DL + + +TY +L+ CK
Sbjct: 252 HMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQ 311
Query: 138 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 197
E ++++M L S +SL+ K G E+ +++ + + P+ + YN
Sbjct: 312 EFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYN 371
Query: 198 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 257
+ +L AE + + M + G D T+S L ++ G + A L E+ +
Sbjct: 372 ALIDSLCKGRKFHEAELLFDRMGKIGLRPND-VTYSILIDMFCRRGKLDTALSFLGEMVD 430
Query: 258 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 317
+ Y LI + + G++S + ++Y +++ + +
Sbjct: 431 TGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINK 490
Query: 318 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 377
A + + E I ++ + G + +A +L PN T+ + +
Sbjct: 491 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIE 550
Query: 378 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 437
Y GDM A + L++ + G VP + + R + A+ F++ L
Sbjct: 551 GYCEEGDMSKAFEFLKEMTEKG------IVPDTYSYRPLIHGLCLTGQASEAKVFVDGLH 604
Query: 438 KAVDDLGVEVFEPLIRTYAAAGR 460
K +L + L+ + G+
Sbjct: 605 KGNCELNEICYTGLLHGFCREGK 627
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 100/229 (43%), Gaps = 17/229 (7%)
Query: 64 KLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLV-AKVQGIDAAENYFV-DL---PE 118
K +DRKL++ LK M RG+ D I+ ++ AK + D E + + DL
Sbjct: 659 KHKDRKLFFGLLK---EMHDRGLK---PDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEG 712
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
N +TY +++N CK +AE L KM+ ++ + + + + + K G +
Sbjct: 713 CVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEVDMQK 771
Query: 179 AI-IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
A+ + ++ ++ TYN+ +R I A +I M DG V+ D T++ + +
Sbjct: 772 AVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDG-VSPDCITYTTMIN 830
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLI---TLYGQTGNLSEV 283
+KA + + D AY LI + G+ G +E+
Sbjct: 831 ELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATEL 879
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 56/285 (19%), Positives = 104/285 (36%), Gaps = 36/285 (12%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N + Y LL+ +C+E E+A ++ ++M + + + + L+ K + ++
Sbjct: 611 NEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLL 670
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+EM + PD Y + A + D A + + M +G V + T++ + + +
Sbjct: 671 KEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNE-VTYTAVINGLCK 729
Query: 242 AGLFEKAERAL------------------------------KELENRNA-----HRDLSA 266
AG +AE K +E NA + +
Sbjct: 730 AGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTAT 789
Query: 267 YQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE 326
Y LI + + G + E + + + I+Y MI L D+ A + +
Sbjct: 790 YNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMT 849
Query: 327 SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
D N +I G + A EL+ R+G PN KT
Sbjct: 850 EKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
>gi|255574497|ref|XP_002528160.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532417|gb|EEF34211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 569
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 133/335 (39%), Gaps = 42/335 (12%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY LL YC + EKAEA+ +M++ L S++ +N+ + K G+P++ I Q M
Sbjct: 185 TYALLLKAYCTSGLLEKAEAIFAEMRKYGLPPSAIVYNAYIDGLMKAGNPQRAVEIFQRM 244
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
K P + TY + + + A ++ EM R + + T++ L + + GL
Sbjct: 245 KRDCCQPSTETYTLLINLHGKASQSYMALKLFNEM-RSQKCKPNICTYTALVNAFAREGL 303
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
EKAE ++L+ D+ AY L+ Y + G FP
Sbjct: 304 CEKAEEIFEQLQEDGHEPDVYAYNALMEAYSRAG---------------FPY-------- 340
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
GA + F + D N+M+ AY + G E+A+ + E +R G
Sbjct: 341 ------------GAAEIFSLMQHMGCEPDRASYNIMVDAYGRGGLHEDAQAVFEEMKRLG 388
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 424
P K+ + Y + GD+ D + + ++G P + + + + + +
Sbjct: 389 ITPTMKSHMLLLSAYSKAGDVAKCEDIVNELHESG------LEPDTFVLNSMLNLYGRLG 442
Query: 425 DVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
E L ++ + + LI Y AG
Sbjct: 443 QFGKMEEVLTAMESGPYATDISTYNILINIYGRAG 477
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 110/287 (38%), Gaps = 42/287 (14%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N TY +L+N + +E + EKAE + E+++E +N+LM Y++ G P I
Sbjct: 287 NICTYTALVNAFAREGLCEKAEEIFEQLQEDGHEPDVYAYNALMEAYSRAGFPYGAAEIF 346
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M+ PD +YN+ + A A+ V EEMKR G + + L S Y +
Sbjct: 347 SLMQHMGCEPDRASYNIMVDAYGRGGLHEDAQAVFEEMKRLG-ITPTMKSHMLLLSAYSK 405
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
AG K E + EL D ++ LYG+ G ++
Sbjct: 406 AGDVAKCEDIVNELHESGLEPDTFVLNSMLNLYGRLGQFGKM------------------ 447
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
E+ ESG DI N++I Y + G E E L +
Sbjct: 448 -----------------EEVLTAMESGPYATDISTYNILINIYGRAGFFEKMEGLFQSLA 490
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCL---EKAIDTGRGDGGK 405
+ P+ TW Y R KL CL E+ ID G G+
Sbjct: 491 AKNLKPDVVTWTSRLGAYSRK---KLYTKCLEIFEEMIDAGCHPDGR 534
>gi|297743996|emb|CBI36966.3| unnamed protein product [Vitis vinifera]
Length = 730
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 112/249 (44%), Gaps = 16/249 (6%)
Query: 147 EKMKELNLGFSSM----------PFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 196
E E+NL FS M +N+L+ K G + I+ EM IMP+ TY
Sbjct: 192 EIFDEMNL-FSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTY 250
Query: 197 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 256
+ + A + A + EMK + D +++ L SIY + G FE+A KE+E
Sbjct: 251 STVIDGYAKAGRLDEALNLFNEMKF-ASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEME 309
Query: 257 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTANISYLNMIQVLVNLKD 314
+ +D Y L+ YG+ G EV R++ ++ FPN ++Y +I V
Sbjct: 310 SSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNL--LTYSTLIDVYSKGGL 367
Query: 315 LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 374
A + F+E++ D+ + + +I A K G +E+A + + G PN T+
Sbjct: 368 YQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNS 427
Query: 375 FSDYYLRNG 383
D + R+G
Sbjct: 428 IIDAFGRSG 436
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 3/206 (1%)
Query: 75 LKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP--ETSKNHLTYGSLLNC 132
+ L M RG+ + + LD V K +D A ++P N +TY ++++
Sbjct: 197 MNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDG 256
Query: 133 YCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPD 192
Y K ++A L +MK ++G + +N+L+++YAK G E+ + +EM++S I D
Sbjct: 257 YAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKD 316
Query: 193 SYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERAL 252
+ TYN + +RV EEMK + R+ + T+S L +Y + GL+++A
Sbjct: 317 AVTYNALLGGYGKQGKYEEVKRVFEEMKAE-RIFPNLLTYSTLIDVYSKGGLYQEAMEVF 375
Query: 253 KELENRNAHRDLSAYQFLITLYGQTG 278
+E + D+ Y LI + G
Sbjct: 376 REFKKAGLKADVVLYSALIDALCKNG 401
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 82/203 (40%), Gaps = 6/203 (2%)
Query: 187 SSIMPDSYTYNVWMRALAAVN-DISGAERVIEEMKRDGR-----VAADWTTFSNLASIYV 240
S + P+ TYN + A D + A + +EM + D T++ L
Sbjct: 164 SGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMNLFSEMLYRGIEQDIFTYNTLLDAVC 223
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
+ G + A + + E+ ++ ++ Y +I Y + G L E ++ ++ A +
Sbjct: 224 KGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRV 283
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
SY ++ + L A KE ES D N ++G Y K+G+ E + + E
Sbjct: 284 SYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEM 343
Query: 361 RRRGADPNAKTWEIFSDYYLRNG 383
+ PN T+ D Y + G
Sbjct: 344 KAERIFPNLLTYSTLIDVYSKGG 366
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 68/128 (53%), Gaps = 1/128 (0%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
K+ +TY +LL Y K+ E+ + + E+MK + + + +++L+ +Y+K G ++ +
Sbjct: 315 KDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEV 374
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
+E K + + D Y+ + AL + A ++EM ++G + + T++++ +
Sbjct: 375 FREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEG-IRPNVVTYNSIIDAFG 433
Query: 241 EAGLFEKA 248
+G+ E A
Sbjct: 434 RSGIVEDA 441
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 118/268 (44%), Gaps = 1/268 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +T+ L+N +CKE +A +L+ M E+ + + + ++SLM Y+ + +
Sbjct: 331 NIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLF 390
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M PD ++YN+ + I A+++ EM G + D +++ L +
Sbjct: 391 DVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQG-LTPDIVSYNTLIDGLCQ 449
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G +A K + DL Y L+ + + G L++ +R++R+++ + +
Sbjct: 450 LGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVM 509
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I + ++L A K F E ++++ +I KEG L+ A E
Sbjct: 510 YNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNME 569
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAV 389
G PN ++ + +L++ D AV
Sbjct: 570 EDGCPPNEFSYNVIIRGFLQHKDESRAV 597
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/317 (18%), Positives = 124/317 (39%), Gaps = 38/317 (11%)
Query: 117 PETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK 176
P+T H+ L+NC+ + + ++L K+ +L L + + FN+L+ K G +
Sbjct: 155 PDTYTLHM----LINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQ 210
Query: 177 IPAIIQEMKASSIMPDSYTYNVWMRALAAVN-------------------DISGAERVIE 217
+ +M A PD +TY + L + D+ +I+
Sbjct: 211 AVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIID 270
Query: 218 EMKRDGRVAADWTTFSNLASIYVEAGLF---------------EKAERALKELENRNAHR 262
+ +D RV FS + + + +F +A L E+ + N
Sbjct: 271 SLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMP 330
Query: 263 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 322
++ + LI ++ + GN+ E + +++ ++Y +++ ++ A K F
Sbjct: 331 NIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLF 390
Query: 323 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 382
+ D+ N++I Y K R+ A++L +G P+ ++ D +
Sbjct: 391 DVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQL 450
Query: 383 GDMKLAVDCLEKAIDTG 399
G ++ A D + + G
Sbjct: 451 GRLREAHDLFKNMLTNG 467
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 2/160 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLN 131
A L +NM G + +I LD K + A F + T N + Y L++
Sbjct: 456 AHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILID 515
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK ++A L ++ L + + +++ K G ++ + M+ P
Sbjct: 516 AMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPP 575
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTT 231
+ ++YNV +R D S A ++I EM+ G VA TT
Sbjct: 576 NEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVATT 615
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 147/335 (43%), Gaps = 11/335 (3%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
++Y +++N YC+ ++ L+E+M+ L + +N ++ L KTG + +++E
Sbjct: 289 ISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLRE 348
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + I PD Y + + ++S A R+ +EM++ +++ D+ T++ + + G
Sbjct: 349 MISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKR-KISPDFITYTAVICGLCQTG 407
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI-SY 302
+A++ E+ + D Y LI Y + G + E + + + L T NI +Y
Sbjct: 408 RVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQM-LQMGLTPNIVTY 466
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+ L ++ A + E +I N ++ K G ++ A +L +
Sbjct: 467 TALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEV 526
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ 422
G P+A T+ D Y ++ +M A + L + +D + P+ T M F
Sbjct: 527 AGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDR------ELQPTVVTFNVLMNGFCM 580
Query: 423 EKDVDGAEGFLE-ILKKAVDDLGVEVFEPLIRTYA 456
++ E L+ +L+K + + LI+ Y
Sbjct: 581 SGMLEDGEKLLKWMLEKGIMP-NATTYNSLIKQYC 614
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 127/282 (45%), Gaps = 9/282 (3%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
+ N +TY +L + CK + A LL +M L + +NSL+ K G+ ++
Sbjct: 460 TPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVK 519
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
++++M+ + PD+ TY M A ++ A ++ +M D + TF+ L + +
Sbjct: 520 LMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQM-LDRELQPTVVTFNVLMNGF 578
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFP-- 295
+G+ E E+ LK + + + + Y LI Y N+ I+R + + P
Sbjct: 579 CMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDG 638
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEE 355
NT NI +I+ +++ A ++ + N +I + K + A E
Sbjct: 639 NTYNI----LIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARE 694
Query: 356 LKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
L E+ RR G + + + IF+D G M+L ++ ++AI+
Sbjct: 695 LFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIE 736
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 112/249 (44%), Gaps = 1/249 (0%)
Query: 151 ELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDIS 210
E+ + +++ +N + + G + ++ +M+ +PD +Y+ + V ++
Sbjct: 246 EVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQ 305
Query: 211 GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 270
++IEEM+ G + + T++ + + + G +AER L+E+ + D Y L
Sbjct: 306 RVLKLIEEMQIKG-LKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTL 364
Query: 271 ITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCA 330
I + + GN+S YR++ ++ + I+Y +I L + A+K F E
Sbjct: 365 IDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRL 424
Query: 331 TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
D +I Y KEG+++ A L + + G PN T+ +D + G++ A +
Sbjct: 425 EPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANE 484
Query: 391 CLEKAIDTG 399
L + G
Sbjct: 485 LLHEMCRKG 493
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/296 (18%), Positives = 116/296 (39%), Gaps = 35/296 (11%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N TY ++ CK +AE +L +M + + + +L+ + K G+ +
Sbjct: 322 NPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLF 381
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM--KR------------DGR--- 224
EM+ I PD TY + L + A+++ EM KR DG
Sbjct: 382 DEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKE 441
Query: 225 -----------------VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAY 267
+ + T++ LA + G + A L E+ + ++ Y
Sbjct: 442 GKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTY 501
Query: 268 QFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES 327
L+ + GN+ + ++ + + +A + ++Y ++ +++ A + ++
Sbjct: 502 NSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLD 561
Query: 328 GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW-EIFSDYYLRN 382
+ NV++ + G LE+ E+L + +G PNA T+ + Y +RN
Sbjct: 562 RELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRN 617
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 99/221 (44%), Gaps = 5/221 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNH---LTYGSLL 130
A +L M ++G+ + ++ + K ID A D+ E + H +TY +L+
Sbjct: 482 ANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDM-EVAGFHPDAVTYTTLM 540
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
+ YCK +A LL +M + L + + FN LM + +G E +++ M IM
Sbjct: 541 DAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIM 600
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
P++ TYN ++ N++ + M G V D T++ L + +A ++A
Sbjct: 601 PNATTYNSLIKQYCIRNNMRATTEIYRGMCAKG-VVPDGNTYNILIKGHCKARNMKEAWF 659
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 291
+++ + + +S+Y LI + + E ++ +R
Sbjct: 660 LHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMR 700
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 144/322 (44%), Gaps = 3/322 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
A +L ++M+K G+ V I +D + K Q +D A F +D + + +T+ SL++
Sbjct: 396 AFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLID 455
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
K + A + EKM + + +S+ + SL+ + G E I ++M + P
Sbjct: 456 GLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSP 515
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D N +M + + + EE+K R D ++S L ++AG +
Sbjct: 516 DLQLLNTYMDCMFKAGEPEKGRAMFEEIKSR-RFVPDARSYSILIHGLIKAGFANETYEL 574
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
++ + D AY +I + + G +++ Y++ ++ ++Y ++I L
Sbjct: 575 FYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAK 634
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+ L A F+E +S ++ + + +I + K GR++ A + E ++G PN T
Sbjct: 635 IDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYT 694
Query: 372 WEIFSDYYLRNGDMKLAVDCLE 393
W D ++ ++ A+ C +
Sbjct: 695 WNSLLDALVKAEEINEALVCFQ 716
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/347 (19%), Positives = 145/347 (41%), Gaps = 39/347 (11%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
AL L + M+ ++ + + +D KV +D A +F ++ + +TY S++
Sbjct: 222 ALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIG 281
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK ++A + E +++ + +N+++ Y G ++ ++++ +A +P
Sbjct: 282 VLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIP 341
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV----------- 240
YN + L + + A RV EEMK+D A + +T++ L +
Sbjct: 342 SVIAYNCILTCLRKMGKVDEALRVFEEMKKDA--APNLSTYNILIDMLCRAGKLDCAFEL 399
Query: 241 -----EAGLF-------------------EKAERALKELENRNAHRDLSAYQFLITLYGQ 276
+AGLF ++A ++++ + D + LI G+
Sbjct: 400 RDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGK 459
Query: 277 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 336
G + + Y+I+ + + T +I Y ++I+ N K +K+ + + D+++
Sbjct: 460 VGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQL 519
Query: 337 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
N + K G E + E + R P+A+++ I ++ G
Sbjct: 520 LNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAG 566
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 114/274 (41%), Gaps = 8/274 (2%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y +++ +CK KA LLE+MK + + + S++ AK ++ + +E K
Sbjct: 590 YNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 649
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
+ I + Y+ + V I A ++EE+ + G + + T+++L V+A
Sbjct: 650 SKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG-LTPNVYTWNSLLDALVKAEEI 708
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
+A + ++ + Y LI + ++ + W+ ++ + ISY M
Sbjct: 709 NEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTM 768
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
I L ++ A F +++ D N MI + R +A L E RRRG
Sbjct: 769 ISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828
Query: 366 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ KT + D +N DCLE+A G
Sbjct: 829 HIHNKTCVVLLDTLHKN-------DCLEQAAIVG 855
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 72/147 (48%), Gaps = 2/147 (1%)
Query: 79 ENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKE 136
E + ++G+ V LD + K + I+ A F + E + N +TYG L+N CK
Sbjct: 681 EELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKV 740
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 196
KA ++M++ + S++ + ++++ AK G+ + A+ KA+ +PDS Y
Sbjct: 741 RKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACY 800
Query: 197 NVWMRALAAVNDISGAERVIEEMKRDG 223
N + L+ N A + EE +R G
Sbjct: 801 NAMIEGLSNGNRAMDAFSLFEETRRRG 827
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 78/193 (40%), Gaps = 1/193 (0%)
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
++Q M+ P Y + A +AVN + ++M+ G F+ L +
Sbjct: 155 VVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELG-YEPTVHLFTTLIRGF 213
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
+ G + A L E+++ + D+ Y I +G+ G + ++ + +
Sbjct: 214 AKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDE 273
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
++Y +MI VL L A + F+ E N MI Y G+ + A L ER
Sbjct: 274 VTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLER 333
Query: 360 ARRRGADPNAKTW 372
R +G+ P+ +
Sbjct: 334 QRAKGSIPSVIAY 346
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 84/200 (42%), Gaps = 3/200 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A +L E M+ +G TV +D +AK+ +D A F + N + Y SL++
Sbjct: 606 AYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLID 665
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ K ++A +LE++ + L + +NSL+ K + Q MK P
Sbjct: 666 GFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTP 725
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ TY + + L V + A +EM++ G + +++ + S +AG +A
Sbjct: 726 NQVTYGILINGLCKVRKFNKAFVFWQEMQKQG-MKPSTISYTTMISGLAKAGNIAEAGAL 784
Query: 252 LKELENRNAHRDLSAYQFLI 271
+ D + Y +I
Sbjct: 785 FDRFKANGGVPDSACYNAMI 804
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/424 (19%), Positives = 172/424 (40%), Gaps = 17/424 (4%)
Query: 43 LNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAK 102
N+ L+ +E L L K Y+ L LS+ ME RG+ + + I ++ +
Sbjct: 73 FNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQ 132
Query: 103 VQGIDAAENYFVDL------PETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGF 156
+ I A + F + P+T +T+ +L+ C + ++A +K+ L F
Sbjct: 133 LGLIPFAFSVFAKILKMGYVPDT----ITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHF 188
Query: 157 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
+ + +L+ K G ++Q + + + P+ YN + ++ V ++ A +
Sbjct: 189 DQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLF 248
Query: 217 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 276
EM G ++ D T+S L S + G A ++ N D+ + L+ + +
Sbjct: 249 SEMISKG-ISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCK 307
Query: 277 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 336
G + E ++ + ++Y +++ +K++ A+ F G DI+
Sbjct: 308 DGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQS 367
Query: 337 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 396
++MI + K + + A L + R+ P+ T+ D ++G + A+ +++
Sbjct: 368 YSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMH 427
Query: 397 DTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYA 456
D G P+ T + + + VD A L LK + + LI+
Sbjct: 428 DRGVP------PTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLC 481
Query: 457 AAGR 460
+G+
Sbjct: 482 QSGK 485
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 151/348 (43%), Gaps = 12/348 (3%)
Query: 97 LDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNL 154
+D + KV+ ++ A + F ++ S + +TY +L++ +C A L KM N+
Sbjct: 232 IDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENI 291
Query: 155 GFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAER 214
FN L+ + K G ++ + M I P+ TYN M V +++ A+
Sbjct: 292 KPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKS 351
Query: 215 VIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLY 274
+ M + G V D ++S + + + + F++A KE+ +N D+ Y LI
Sbjct: 352 IFNTMAQGG-VNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGL 410
Query: 275 GQTGNLSEVYRIWRSLR-LAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYD 333
++G +S ++ + P T +Y +++ L + + A + + +
Sbjct: 411 SKSGRISYALQLVDQMHDRGVPPTIR-TYNSILDALCKIHQVDKAIALLTKLKDKGIQPN 469
Query: 334 IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
+ +++I + G+LE+A ++ E +G + N T+ I + G A+ L
Sbjct: 470 MYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLS 529
Query: 394 KAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL-EILKKAV 440
K D G +P ++T + ++ + D AE L E++ + V
Sbjct: 530 KMEDNG------CIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGV 571
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 65/346 (18%), Positives = 134/346 (38%), Gaps = 11/346 (3%)
Query: 113 FVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTG 172
F+ + N ++Y S + + A +L ++ N + FN ++ K+
Sbjct: 40 FIPYSSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSK 99
Query: 173 HPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTF 232
H + + Q+M+ I P+ N+ + + I A V ++ + G V D TF
Sbjct: 100 HYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYV-PDTITF 158
Query: 233 SNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL-- 290
+ L G ++A ++ H D +Y LI + G + + +
Sbjct: 159 TTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDG 218
Query: 291 RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRL 350
L PN + Y +I + +K + A F E S + D+ + +I + G+L
Sbjct: 219 NLVQPNV--VMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKL 276
Query: 351 ENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSS 410
+A +L + P+ T+ I + + ++G MK + D G K P+
Sbjct: 277 NDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEG----KTVFDMMMKQGIK--PNF 330
Query: 411 ETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYA 456
T + M + K+V+ A+ + + + ++ + +I +
Sbjct: 331 VTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFC 376
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/399 (21%), Positives = 160/399 (40%), Gaps = 43/399 (10%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
+ + T+ +L+ + +E E A + +M E+ + + N L+ Y K G E
Sbjct: 212 VAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDAL 271
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGR-------------- 224
IQ+ A PD TYN ++ L + + A +V++ M ++G
Sbjct: 272 GYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCL 331
Query: 225 --------------------VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 264
D TTF+ L + E+A +++ + D+
Sbjct: 332 CKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDV 391
Query: 265 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 324
+ LI + G+ R++ ++ + ++Y +I L +L L A K+
Sbjct: 392 YTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKD 451
Query: 325 WES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
ES GC I N +I K+ R+E AEE+ ++ +G NA T+ D ++
Sbjct: 452 MESTGCPRSTI-TYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDK 510
Query: 384 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDL 443
+ A + + + I G P++ T + + H+ ++ D+ A LE + ++
Sbjct: 511 KIDDAFELINQMISEG------LQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEV 564
Query: 444 GVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKK 482
V + LI AGRT V L+ L+ +++ + K
Sbjct: 565 DVVTYGTLINGLCKAGRTQ-VALKVLRGMRIKGMRPTPK 602
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 123/310 (39%), Gaps = 40/310 (12%)
Query: 128 SLLNCY-CKELMTEKAEALLEKMKEL-NLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
S L+ Y ++L + + +L +++ L + ++ +N L+ + + + + ++ EM
Sbjct: 114 SFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMG 173
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
A I PD T+N M+AL + + A ++EEM G VA D TTF+ L +VE G
Sbjct: 174 ARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRG-VAPDETTFTTLMQGFVEEGSI 232
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNL--------SEVYRIWRSLRLAFPNT 297
E A R + LI Y + G + E+ + ++ +
Sbjct: 233 EAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTF 292
Query: 298 AN---------------------------ISYLNMIQVLVNLKDLPGAEKCFKEW-ESGC 329
N +Y ++ L L A+ + + GC
Sbjct: 293 VNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGC 352
Query: 330 ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 389
DI N +I A RLE A +L + +G P+ T+ I + + GD LA+
Sbjct: 353 LP-DITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLAL 411
Query: 390 DCLEKAIDTG 399
E+ ++G
Sbjct: 412 RLFEEMKNSG 421
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 2/152 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
AL L ++ME G ++ +D + K I+ AE F +DL S+N +T+ +L++
Sbjct: 445 ALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLID 504
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK+ + A L+ +M L +++ +NS++T Y K G +K I++ M A+
Sbjct: 505 GLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEV 564
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
D TY + L A +V+ M+ G
Sbjct: 565 DVVTYGTLINGLCKAGRTQVALKVLRGMRIKG 596
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N++TY S+L YCK+ +KA +LE M + + +L+ K G + ++
Sbjct: 530 NNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVL 589
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
+ M+ + P YN +++L N+I A + EM G
Sbjct: 590 RGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 631
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 107/273 (39%), Gaps = 11/273 (4%)
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA-E 249
P Y +R L AV + + ++ EM+R+G S L S Y LF+ A +
Sbjct: 72 PGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDS-YEGQQLFDDAVD 130
Query: 250 RALKELENR-NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQV 308
L +L+ D Y L+ + + + + ++ + +++ +++
Sbjct: 131 LILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKA 190
Query: 309 LVNLKDLPGAEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
L + A +E S G A + T +M G + +EG +E A +K R G
Sbjct: 191 LCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQG-FVEEGSIEAALRVKARMLEMGCSA 249
Query: 368 NAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVD 427
T + + Y + G ++ A+ +++ I G + P T TF+ Q V
Sbjct: 250 TKVTVNVLINGYCKLGRVEDALGYIQQEIADG------FEPDQITYNTFVNGLCQNDHVG 303
Query: 428 GAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 460
A ++++ + D V + ++ G+
Sbjct: 304 HALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQ 336
>gi|356541064|ref|XP_003539003.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 703
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 124/283 (43%), Gaps = 2/283 (0%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
S N + Y +L++ YCK E+AE L +MK + + FN LM Y++ PE +
Sbjct: 362 VSSNTIVYNTLMDAYCKSNRVEEAEGLFVEMKTKGIKPTEATFNILMYAYSRKMQPEIVE 421
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISG-AERVIEEMKRDGRVAADWTTFSNLAS 237
++ EM+ + + P++ +Y + A ++S A +MK+DG + +++ L
Sbjct: 422 KLMAEMQETGLKPNAKSYTCIISAYGKQKNMSDMAADAFLKMKKDG-IKPTSHSYTALIH 480
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
Y +G EKA A + ++ + Y L+ + + G+ + +IW+ +R
Sbjct: 481 AYSVSGWHEKAYAAFENMQREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMRREKVEG 540
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
+++ ++ A ++ + + N+++ AYA+ GR EL
Sbjct: 541 TRVTFNTLVDGFAKHGYYKEARDVISKFANVGLHPTVMTYNMLMNAYARGGRHSKLPELL 600
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 400
E P++ T+ +LR D A ++ + +G+
Sbjct: 601 EEMAAHNLKPDSVTYSTMIYAFLRVRDFSQAFFYHQEMVKSGQ 643
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 2/149 (1%)
Query: 79 ENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLNCYCKE 136
ENM++ G+ ++ LD + + + + +T+ +L++ + K
Sbjct: 496 ENMQREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMRREKVEGTRVTFNTLVDGFAKH 555
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 196
++A ++ K + L + M +N LM YA+ G K+P +++EM A ++ PDS TY
Sbjct: 556 GYYKEARDVISKFANVGLHPTVMTYNMLMNAYARGGRHSKLPELLEEMAAHNLKPDSVTY 615
Query: 197 NVWMRALAAVNDISGAERVIEEMKRDGRV 225
+ + A V D S A +EM + G+V
Sbjct: 616 STMIYAFLRVRDFSQAFFYHQEMVKSGQV 644
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/313 (20%), Positives = 120/313 (38%), Gaps = 40/313 (12%)
Query: 46 FLKSKKRVFKWE---VGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAK 102
F K + KW +G +K L AL + +EK+G++ +D K
Sbjct: 319 FEKMNGKGVKWGEEVLGALIKSFCVEGLMSEALIILSELEKKGVSSNTIVYNTLMDAYCK 378
Query: 103 VQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMP 160
++ AE FV++ T+ L+ Y +++ E E L+ +M+E L ++
Sbjct: 379 SNRVEEAEGLFVEMKTKGIKPTEATFNILMYAYSRKMQPEIVEKLMAEMQETGLKPNAKS 438
Query: 161 FNSLMTLYAKTGHPEKIPA-IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM 219
+ +++ Y K + + A +MK I P S++Y + A + A E M
Sbjct: 439 YTCIISAYGKQKNMSDMAADAFLKMKKDGIKPTSHSYTALIHAYSVSGWHEKAYAAFENM 498
Query: 220 KRDG---------------RVAAD-------W------------TTFSNLASIYVEAGLF 245
+R+G R A D W TF+ L + + G +
Sbjct: 499 QREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMRREKVEGTRVTFNTLVDGFAKHGYY 558
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
++A + + N H + Y L+ Y + G S++ + + +++Y M
Sbjct: 559 KEARDVISKFANVGLHPTVMTYNMLMNAYARGGRHSKLPELLEEMAAHNLKPDSVTYSTM 618
Query: 306 IQVLVNLKDLPGA 318
I + ++D A
Sbjct: 619 IYAFLRVRDFSQA 631
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 129/328 (39%), Gaps = 28/328 (8%)
Query: 164 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
L L K +K+ + + +S DS+ YN + L + A +V E M+ D
Sbjct: 231 LFPLLGKAKMGDKLMVLFTNLPSSREFRDSHVYNAAISGLLSSARYEDAWKVYESMEADN 290
Query: 224 RVAADWTTFSNLASIYVEAGLFEK-AERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 282
V D T S + + + G K A + +++ + LI + G +SE
Sbjct: 291 -VLPDHVTCSIMVIVMRKLGHSAKDAWQFFEKMNGKGVKWGEEVLGALIKSFCVEGLMSE 349
Query: 283 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 342
I L ++ I Y ++ + AE F E ++ N+++
Sbjct: 350 ALIILSELEKKGVSSNTIVYNTLMDAYCKSNRVEEAEGLFVEMKTKGIKPTEATFNILMY 409
Query: 343 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK-LAVDCLEKAIDTGRG 401
AY+++ + E E+L + G PNAK++ Y + +M +A D K +
Sbjct: 410 AYSRKMQPEIVEKLMAEMQETGLKPNAKSYTCIISAYGKQKNMSDMAADAFLKM----KK 465
Query: 402 DGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAA---- 457
DG K P+S + + + G+ E A +++ E +P I TY A
Sbjct: 466 DGIK--PTSHSYTALIHAY-------SVSGWHEKAYAAFENMQREGIKPSIETYTALLDA 516
Query: 458 ---AGRTSPVM-----LRRLKMEKVEVS 477
AG T +M +RR K+E V+
Sbjct: 517 FRRAGDTQTLMKIWKLMRREKVEGTRVT 544
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 88/242 (36%), Gaps = 35/242 (14%)
Query: 145 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 204
EKM + + +L+ + G + I+ E++ + ++ YN M A
Sbjct: 318 FFEKMNGKGVKWGEEVLGALIKSFCVEGLMSEALIILSELEKKGVSSNTIVYNTLMDAYC 377
Query: 205 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 264
N + AE + EMK G + TF+ L Y E E+ + E++ +
Sbjct: 378 KSNRVEEAEGLFVEMKTKG-IKPTEATFNILMYAYSRKMQPEIVEKLMAEMQETGLKPNA 436
Query: 265 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 324
+Y +I+ YG+ N+S++ A+ K
Sbjct: 437 KSYTCIISAYGKQKNMSDM---------------------------------AADAFLKM 463
Query: 325 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 384
+ G T +I AY+ G E A E +R G P+ +T+ D + R GD
Sbjct: 464 KKDGIKPTSHSYT-ALIHAYSVSGWHEKAYAAFENMQREGIKPSIETYTALLDAFRRAGD 522
Query: 385 MK 386
+
Sbjct: 523 TQ 524
>gi|147859909|emb|CAN83144.1| hypothetical protein VITISV_040783 [Vitis vinifera]
Length = 724
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 145/310 (46%), Gaps = 18/310 (5%)
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
TE+AEA+ E++KE L + +N+L+ Y KTG + +I+ EM+ S PD +TY++
Sbjct: 378 TEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSL 437
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
+ A A A V++EM+ G V + FS + + Y + G ++K+ + L+E+ N
Sbjct: 438 LIDAYANAGRWESARIVLKEMEASG-VRPNSYVFSRILASYRDRGKWQKSFQVLREMRNS 496
Query: 259 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 318
D Y +I +G+ L + +R+ +++ +I A
Sbjct: 497 GVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKA 556
Query: 319 EKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 377
E+ F+ ESGC+ N+MI ++ ++ R E+ + L + + +G N T+
Sbjct: 557 EELFEAMQESGCSPCTT-TYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTL-- 613
Query: 378 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 437
G + A++ A R DG K PS + + + F +++ A L+ +K
Sbjct: 614 -----GLSEQAIN----AFRVMRADGLK--PSVLVLNSLINAFGEDRRDAEAFSVLQYMK 662
Query: 438 KAVDDLGVEV 447
+ +DL +V
Sbjct: 663 E--NDLKPDV 670
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 101/252 (40%), Gaps = 5/252 (1%)
Query: 127 GSLLN----CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQ 182
G LLN + K +A + L ++ L + +++T G E+ AI +
Sbjct: 327 GQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFE 386
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
E+K +MP + YN ++ + AE ++ EM+R G + D T+S L Y A
Sbjct: 387 ELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSG-FSPDEHTYSLLIDAYANA 445
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY 302
G +E A LKE+E + + ++ Y G + +++ R +R + + Y
Sbjct: 446 GRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFY 505
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
MI L A F D N +I + K G AEEL E +
Sbjct: 506 NVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQE 565
Query: 363 RGADPNAKTWEI 374
G P T+ I
Sbjct: 566 SGCSPCTTTYNI 577
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 73/157 (46%), Gaps = 1/157 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY L++ Y E A +L++M+ + +S F+ ++ Y G +K
Sbjct: 429 SPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQ 488
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+++EM+ S + PD + YNV + N + A + M+ +G V D T++ L +
Sbjct: 489 VLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEG-VQPDAVTWNTLIDCH 547
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 276
++G KAE + ++ + Y +I +G+
Sbjct: 548 CKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGE 584
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 108/261 (41%), Gaps = 8/261 (3%)
Query: 126 YGSLLNCYCKELMT-EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
+ SLL C + + A +L+ ++ NL FS S+ L G EK+
Sbjct: 191 WHSLLKSLCSDSSSIGTAYSLVTWLERHNLCFSYELLYSI--LIHALGRSEKLYEAFLLS 248
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ ++ P TYN + A A +D+ A ++ M+RDG +D+ +S +
Sbjct: 249 QRQTLTP--LTYNALIGACARNDDLEKALNLMSRMRRDG-YPSDFVNYSFIIQSLTRTNK 305
Query: 245 FEKA--ERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY 302
+ + ++ E+E+ D +I + ++G+++ ++ + +
Sbjct: 306 SDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATL 365
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+ +I L N AE F+E + G R N ++ Y K G L++AE + R
Sbjct: 366 VAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMER 425
Query: 363 RGADPNAKTWEIFSDYYLRNG 383
G P+ T+ + D Y G
Sbjct: 426 SGFSPDEHTYSLLIDAYANAG 446
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 131/344 (38%), Gaps = 55/344 (15%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK--IPAII 181
LTY +L+ + EKA L+ +M+ + ++ ++ +T + + I
Sbjct: 256 LTYNALIGACARNDDLEKALNLMSRMRRDGYPSDFVNYSFIIQSLTRTNKSDSSMLQKIY 315
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
E+++ I D N + A D++ A + ++ +G ++ T + +
Sbjct: 316 AEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNG-LSPKTATLVAVITALGN 374
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI--------------- 286
AG E+AE +EL+ AY L+ Y +TG+L + I
Sbjct: 375 AGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHT 434
Query: 287 -------------WRSLRLAF---------PNTANISYLNMIQVLVNLKDLPGAEKCF-- 322
W S R+ PN+ S ++L + +D +K F
Sbjct: 435 YSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFS-----RILASYRDRGKWQKSFQV 489
Query: 323 -KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 381
+E + + D NVMI + K L++A +R R G P+A TW D + +
Sbjct: 490 LREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCK 549
Query: 382 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF-EQEK 424
+G A + E ++G P + T + F EQE+
Sbjct: 550 SGHHNKAEELFEAMQESG------CSPCTTTYNIMINSFGEQER 587
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/392 (21%), Positives = 158/392 (40%), Gaps = 43/392 (10%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
+ + T+ +L+ + +E E A + +M E+ + + N L+ Y K G E
Sbjct: 120 VAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDAL 179
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGR-------------- 224
IQ+ A PD TYN ++ L + + A +V++ M ++G
Sbjct: 180 GYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCL 239
Query: 225 --------------------VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 264
D TTF+ L + E+A +++ + D+
Sbjct: 240 CKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDV 299
Query: 265 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 324
+ LI + G+ R++ ++ + ++Y +I L +L L A K+
Sbjct: 300 YTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKD 359
Query: 325 WES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
ES GC I N +I K+ R+E AEE+ ++ +G NA T+ D ++
Sbjct: 360 MESTGCPRSTI-TYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDK 418
Query: 384 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDL 443
+ A + + + I G P++ T + + H+ ++ D+ A LE + ++
Sbjct: 419 KIDDAFELINQMISEG------LQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEV 472
Query: 444 GVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVE 475
V + LI AGRT V L+ L+ +++
Sbjct: 473 DVVTYGTLINGLCKAGRTQ-VALKVLRGMRIK 503
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 123/310 (39%), Gaps = 40/310 (12%)
Query: 128 SLLNCY-CKELMTEKAEALLEKMKEL-NLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
S L+ Y ++L + + +L +++ L + ++ +N L+ + + + + ++ EM
Sbjct: 22 SFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMG 81
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
A I PD T+N M+AL + + A ++EEM G VA D TTF+ L +VE G
Sbjct: 82 ARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRG-VAPDETTFTTLMQGFVEEGSI 140
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNL--------SEVYRIWRSLRLAFPNT 297
E A R + LI Y + G + E+ + ++ +
Sbjct: 141 EAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTF 200
Query: 298 AN---------------------------ISYLNMIQVLVNLKDLPGAEKCFKEW-ESGC 329
N +Y ++ L L A+ + + GC
Sbjct: 201 VNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGC 260
Query: 330 ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 389
DI N +I A RLE A +L + +G P+ T+ I + + GD LA+
Sbjct: 261 LP-DITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLAL 319
Query: 390 DCLEKAIDTG 399
E+ ++G
Sbjct: 320 RLFEEMKNSG 329
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 2/152 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
AL L ++ME G ++ +D + K I+ AE F +DL S+N +T+ +L++
Sbjct: 353 ALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLID 412
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK+ + A L+ +M L +++ +NS++T Y K G +K I++ M A+
Sbjct: 413 GLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEV 472
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
D TY + L A +V+ M+ G
Sbjct: 473 DVVTYGTLINGLCKAGRTQVALKVLRGMRIKG 504
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N++TY S+L YCK+ +KA +LE M + + +L+ K G + ++
Sbjct: 438 NNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVL 497
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
+ M+ + P YN +++L N+I A + EM G
Sbjct: 498 RGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 539
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/399 (21%), Positives = 160/399 (40%), Gaps = 43/399 (10%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
+ + T+ +L+ + +E E A + +M E+ + + N L+ Y K G E
Sbjct: 212 VAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDAL 271
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGR-------------- 224
IQ+ A PD TYN ++ L + + A +V++ M ++G
Sbjct: 272 GYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCL 331
Query: 225 --------------------VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 264
D TTF+ L + E+A +++ + D+
Sbjct: 332 CKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDV 391
Query: 265 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 324
+ LI + G+ R++ ++ + ++Y +I L +L L A K+
Sbjct: 392 YTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKD 451
Query: 325 WES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
ES GC I N +I K+ R+E AEE+ ++ +G NA T+ D ++
Sbjct: 452 MESTGCPRSTI-TYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDK 510
Query: 384 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDL 443
+ A + + + I G P++ T + + H+ ++ D+ A LE + ++
Sbjct: 511 KIDDAFELINQMISEG------LQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEV 564
Query: 444 GVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKK 482
V + LI AGRT V L+ L+ +++ + K
Sbjct: 565 DVVTYGTLINGLCKAGRTQ-VALKVLRGMRIKGMRPTPK 602
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 123/310 (39%), Gaps = 40/310 (12%)
Query: 128 SLLNCY-CKELMTEKAEALLEKMKEL-NLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
S L+ Y ++L + + +L +++ L + ++ +N L+ + + + + ++ EM
Sbjct: 114 SFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMG 173
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
A I PD T+N M+AL + + A ++EEM G VA D TTF+ L +VE G
Sbjct: 174 ARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRG-VAPDETTFTTLMQGFVEEGSI 232
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNL--------SEVYRIWRSLRLAFPNT 297
E A R + LI Y + G + E+ + ++ +
Sbjct: 233 EAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTF 292
Query: 298 AN---------------------------ISYLNMIQVLVNLKDLPGAEKCFKEW-ESGC 329
N +Y ++ L L A+ + + GC
Sbjct: 293 VNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGC 352
Query: 330 ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 389
DI N +I A RLE A +L + +G P+ T+ I + + GD LA+
Sbjct: 353 LP-DITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLAL 411
Query: 390 DCLEKAIDTG 399
E+ ++G
Sbjct: 412 RLFEEMKNSG 421
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 2/152 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
AL L ++ME G ++ +D + K I+ AE F +DL S+N +T+ +L++
Sbjct: 445 ALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLID 504
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK+ + A L+ +M L +++ +NS++T Y K G +K I++ M A+
Sbjct: 505 GLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEV 564
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
D TY + L A +V+ M+ G
Sbjct: 565 DVVTYGTLINGLCKAGRTQVALKVLRGMRIKG 596
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N++TY S+L YCK+ +KA +LE M + + +L+ K G + ++
Sbjct: 530 NNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVL 589
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
+ M+ + P YN +++L N+I A + EM G
Sbjct: 590 RGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 631
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 107/273 (39%), Gaps = 11/273 (4%)
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA-E 249
P Y +R L AV + + ++ EM+R+G S L S Y LF+ A +
Sbjct: 72 PGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDS-YEGQQLFDDAVD 130
Query: 250 RALKELENR-NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQV 308
L +L+ D Y L+ + + + + ++ + +++ +++
Sbjct: 131 LILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKA 190
Query: 309 LVNLKDLPGAEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
L + A +E S G A + T +M G + +EG +E A +K R G
Sbjct: 191 LCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQG-FVEEGSIEAALRVKARMLEMGCSA 249
Query: 368 NAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVD 427
T + + Y + G ++ A+ +++ I G + P T TF+ Q V
Sbjct: 250 TKVTVNVLINGYCKLGRVEDALGYIQQEIADG------FEPDQITYNTFVNGLCQNDHVG 303
Query: 428 GAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 460
A ++++ + D V + ++ G+
Sbjct: 304 HALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQ 336
>gi|15218855|ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g03560, mitochondrial; Flags: Precursor
gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana]
gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 101/238 (42%), Gaps = 36/238 (15%)
Query: 162 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 221
N+L+ + K G E++ + ++MK + I P YTYN M L + + AERV E M+
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVME- 249
Query: 222 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 281
GR+ D T++ + Y +AG +KA L+++E R D
Sbjct: 250 SGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEAD------------------ 291
Query: 282 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 341
I+Y+ MIQ D ++E + +++I
Sbjct: 292 -----------------KITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVI 334
Query: 342 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
G KEG+L + E R+G+ PN + + D Y ++G ++ A+ L + ID G
Sbjct: 335 GGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEG 392
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 129/303 (42%), Gaps = 14/303 (4%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLNCYCKELM 138
M++ G+ T+ ++ + +D+AE F ++ + +TY +++ YCK
Sbjct: 213 MKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQ 272
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTL----YAKTGHPEKIPAIIQEMKASSIMPDSY 194
T+KA +EK++++ + MT+ YA + + A+ QEM I +
Sbjct: 273 TQKA---MEKLRDMETRGHEADKITYMTMIQACYADSDFGSCV-ALYQEMDEKGIQVPPH 328
Query: 195 TYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE 254
+++ + L ++ V E M R G + ++ L Y ++G E A R L
Sbjct: 329 AFSLVIGGLCKEGKLNEGYTVFENMIRKGS-KPNVAIYTVLIDGYAKSGSVEDAIRLLHR 387
Query: 255 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 314
+ + D+ Y ++ + G + E + + R ++ Y ++I L
Sbjct: 388 MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGR 447
Query: 315 LPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA-RRRGADPNAKTW 372
+ AE+ F+E E GC T D N +I A+ K +++ A L +R G D T+
Sbjct: 448 VDEAERLFEEMSEKGC-TRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTY 506
Query: 373 EIF 375
I
Sbjct: 507 TIL 509
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 76/179 (42%), Gaps = 9/179 (5%)
Query: 79 ENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKE 136
ENM ++G V+ + +D AK ++ A + + + +TY ++N CK
Sbjct: 351 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 410
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 196
E+A + L +SM ++SL+ K G ++ + +EM DSY Y
Sbjct: 411 GRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCY 470
Query: 197 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE--KAERALK 253
N + A + A + + M+ + T++ L S G+F+ + E ALK
Sbjct: 471 NALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLS-----GMFKEHRNEEALK 524
>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Brachypodium distachyon]
Length = 714
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 141/360 (39%), Gaps = 38/360 (10%)
Query: 42 QLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVA 101
QL ++ K+ + + L R A L ME G+ TV +D +
Sbjct: 287 QLVDIMRLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLF 346
Query: 102 KVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSM 159
K +AA+ F ++ + +TY SL+N YCK ++A L +K LG + +
Sbjct: 347 KTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVL 406
Query: 160 PFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM 219
+N L+ Y + G E + +EM +PD TY + M V +++ +EM
Sbjct: 407 TYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEM 466
Query: 220 KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGN 279
G + D ++ S + G A + +E+ R D Y LI +TG+
Sbjct: 467 LSKG-LEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGS 525
Query: 280 LSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
L + Y +W + M+ + L C TY
Sbjct: 526 LKDAYVLW---------------MKMVTDGLRLD---------------CVTY-----TC 550
Query: 340 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+I A+ + GRL A+ + + G P+ T+ IF Y R G++ LA K ++ G
Sbjct: 551 LIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEG 610
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 123/300 (41%), Gaps = 39/300 (13%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGF--SSMPFNSLMTLYAKTGHPEKIPAII 181
TY +LL+ +CK ++A ALL+ M+ G + + +N ++ A+ G EK ++
Sbjct: 230 FTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLV 289
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M+ S ++TYN + L A + + A ++ EM+ +G + T++ L +
Sbjct: 290 DIMRLSK-KASAFTYNPLITGLLARDFVEKAGALLLEMENEG-IVPTVVTYNTLIDGLFK 347
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G E A+ E+ + DL Y LI Y + GNL + ++ L+ A ++
Sbjct: 348 TGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLT 407
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEW-ESGC----ATYDIRVT------------------- 337
Y +I L DL GA + +E E C TY I +
Sbjct: 408 YNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEML 467
Query: 338 -----------NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 386
N I A G + NA +L+E RG + T+ + D + G +K
Sbjct: 468 SKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLK 527
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 104/234 (44%), Gaps = 4/234 (1%)
Query: 144 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM--KASSIMPDSYTYNVWMR 201
A+ M +L + S +N+L+ + K G ++ A++++M +A+ +P+ TYNV +
Sbjct: 215 AVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVIN 274
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 261
LA ++ A ++++ M+ + +A T++ L + + EKA L E+EN
Sbjct: 275 GLARKGELEKAAQLVDIMRLSKKASA--FTYNPLITGLLARDFVEKAGALLLEMENEGIV 332
Query: 262 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 321
+ Y LI +TGN + +R I+Y ++I +L A
Sbjct: 333 PTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCL 392
Query: 322 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 375
F + + + N++I Y + G LE A LKE P+ T+ I
Sbjct: 393 FGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTIL 446
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 84/205 (40%), Gaps = 3/205 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK--NHLTYGSLLN 131
A +L E M RG++ + +D + K + A ++ + + +TY L++
Sbjct: 494 AFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIH 553
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C+ +A+ + + M L S + + + Y + G+ ++M + P
Sbjct: 554 AHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEP 613
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ TYNV M AL + A + EM G V + T++ L + G + A R
Sbjct: 614 NEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKY-TYTLLIDGSCKEGNWVHAIRL 672
Query: 252 LKELENRNAHRDLSAYQFLITLYGQ 276
E+ + H D + L +G+
Sbjct: 673 YCEMHQKGIHPDHCTHNALFKGFGE 697
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 169/391 (43%), Gaps = 32/391 (8%)
Query: 100 VAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFS 157
++KV ++ + YF + E N TY L++ Y K E AE L+++M + L +
Sbjct: 407 LSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPN 466
Query: 158 SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIE 217
+ + L+ Y K+ EK+ + + M +M D+ Y + + L++ ++ A RV+
Sbjct: 467 DVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLS 526
Query: 218 EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQT 277
E++++G V D +S+L S + EKA L E+ + ++ Y LI ++
Sbjct: 527 EIEKNGSV-PDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKS 585
Query: 278 GNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 335
G++S ++ S+ + PN ++Y ++I + D+ A + E + T D
Sbjct: 586 GDISYARNVFNSILAKGLVPNC--VTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAF 643
Query: 336 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 395
V +V+ + G LE A L E RG + ++ D + + G M+ + L
Sbjct: 644 VYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLH-- 700
Query: 396 IDTGRGDGGKWVPSSETI----------------RTFMRHFEQEKDVDGAEGFLEILKKA 439
+ GRG VP++ TI T +Q+ A F +
Sbjct: 701 VIMGRG----LVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDM 756
Query: 440 VDD--LGVEVFEPLIRTYAAAGRTSPVMLRR 468
++ + ++V + +IR + G ++ R
Sbjct: 757 INQGKIPLDVVDDMIRDHCKEGNLDKALMLR 787
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 129/276 (46%), Gaps = 1/276 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
TYG+L+N CK + +A+ALL++M L + + + +L+ + + G+ ++ +I+E
Sbjct: 188 FTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKE 247
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M A+ + P+ TY+ +R L + + A ++++M RD D T++ + +
Sbjct: 248 MVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSH-RPDTITYNLIIEGHFRHH 306
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
+ A R L E+EN ++ Y +I Q+G + + + Y
Sbjct: 307 NKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYA 366
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I ++ A + F + D+ N +I +K GR+E + + + + R
Sbjct: 367 PLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQER 426
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
G PN T+ YL+NGD++ A +++ +DTG
Sbjct: 427 GLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTG 462
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 122/275 (44%), Gaps = 1/275 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ YCK + A+ +L +M+E G +++ +N L+ ++G E+
Sbjct: 114 SPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFG 173
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
++M+ ++PD +TY + L + A+ +++EM + + ++NL +
Sbjct: 174 FKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSC-AELKPNVVVYANLIDGF 232
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
+ G ++A + +KE+ + Y L+ + G + + + +
Sbjct: 233 MREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDT 292
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
I+Y +I+ + A + E E+ + ++ ++MI + G E A +L E
Sbjct: 293 ITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEE 352
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
+G PNA + Y R G++ LA + +K
Sbjct: 353 MTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDK 387
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 150/362 (41%), Gaps = 31/362 (8%)
Query: 38 SVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHL 97
+ + L+Q + R++ G + L A ++ +EK G +V D ++
Sbjct: 489 TFKSMLDQGVMLDNRIY----GILIHNLSSSGNMEAAFRVLSEIEKNG---SVPDVHVYS 541
Query: 98 DLVAKVQGIDAAENYFVDLPETSK-----NHLTYGSLLNCYCKELMTEKAEALLEKMKEL 152
L++ + E F L E SK N + Y +L++ CK A + +
Sbjct: 542 SLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAK 601
Query: 153 NLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA 212
L + + + SL+ K G + EM A+ I PD++ Y+V ++ D+ A
Sbjct: 602 GLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQA 661
Query: 213 ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLIT 272
+IEEM G A ++F+NL + + G ++ + L + R + + +I+
Sbjct: 662 MFLIEEMFLRGH--ASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIIS 719
Query: 273 LYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY 332
+ G LSEV+ I+ L+ +A + ++ ++N +P
Sbjct: 720 GLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIP---------------- 763
Query: 333 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 392
+ V + MI + KEG L+ A L++ + A ++ D R G + A++ L
Sbjct: 764 -LDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLL 822
Query: 393 EK 394
++
Sbjct: 823 KE 824
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 117/294 (39%), Gaps = 9/294 (3%)
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + I PD YTY+ + A V + A++V+ EM+ G + T++ L + +G
Sbjct: 108 MVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERG-CGLNTVTYNVLIAGLCRSG 166
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
E+A K++E+ D Y LI ++ +E + + A + Y
Sbjct: 167 AVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYA 226
Query: 304 NMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
N+I + + A K KE +G I N++ G K G+++ A L ++ R
Sbjct: 227 NLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRG-LCKMGQMDRASLLLKQMVR 285
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ 422
P+ T+ + + + R+ + K A L + + G P+ T + Q
Sbjct: 286 DSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGIS------PNVYTYSIMIHGLCQ 339
Query: 423 EKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEV 476
+ + A LE + V+ PLI Y G S KM KV V
Sbjct: 340 SGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNV 393
>gi|302826107|ref|XP_002994593.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
gi|300137364|gb|EFJ04344.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
Length = 521
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 133/295 (45%), Gaps = 15/295 (5%)
Query: 97 LDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNL 154
+D K I+ AE F + E N T+G L+N Y EKAE L +M++
Sbjct: 111 IDAYGKSLNIEDAEKTFNRMQEALCVPNEETFGVLINGYRLAGSFEKAEELFVQMQKRGY 170
Query: 155 GFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAER 214
+ N+ + + + A+ ++++ P+ TYN + + S AE
Sbjct: 171 SPGPLACNTFLHVLEDAKEYRRAEALFRDLEKYECEPNIDTYNRMIVIYGKAGEPSKAEM 230
Query: 215 VIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLY 274
+ M+R + TF+ L + + GL+ +AER +L+ + D AY L+ Y
Sbjct: 231 LYRSMRR-AMCPPNICTFTALMNAFARQGLYREAERYFDKLQEFDYKPDHYAYNALMEAY 289
Query: 275 GQTGNLSEVYRIWRSLRL--AFPNTANISYLNMIQVLVNLKDLPG----AEKCFKEWESG 328
Q G+ + I+++++ FP+T + + +L+N G AEK FK +S
Sbjct: 290 SQGGSPAGALEIFQTMQRNGCFPDTVSHN------ILINAYGRAGLYEDAEKIFKSMQSA 343
Query: 329 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
+ +++ +++ AYA+ GR+E AEEL R G P+ + + Y +G
Sbjct: 344 GFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNSLINAYGVSG 398
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 136/331 (41%), Gaps = 6/331 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP--ETSKNHLTYGSLLN 131
A +L M+KRG + L ++ + AE F DL E N TY ++
Sbjct: 158 AEELFVQMQKRGYSPGPLACNTFLHVLEDAKEYRRAEALFRDLEKYECEPNIDTYNRMIV 217
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
Y K KAE L M+ + F +LM +A+ G + +++ P
Sbjct: 218 IYGKAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDKLQEFDYKP 277
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D Y YN M A + +GA + + M+R+G D + + L + Y AGL+E AE+
Sbjct: 278 DHYAYNALMEAYSQGGSPAGALEIFQTMQRNG-CFPDTVSHNILINAYGRAGLYEDAEKI 336
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY---LNMIQV 308
K +++ +L + L++ Y + G + E + ++ + Y +N V
Sbjct: 337 FKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNSLINAYGV 396
Query: 309 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 368
+D+ + S DI N +I YA+ G + AEEL + R P+
Sbjct: 397 SGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPRAEELFQGLARLKLVPD 456
Query: 369 AKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
A TW Y + + L+K +++G
Sbjct: 457 ATTWTALMGGYAKKKLYRKCTSILKKMLESG 487
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 91/250 (36%), Gaps = 42/250 (16%)
Query: 138 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE----MKASSIMPDS 193
M E A A+ + L G + +++ M++ + + P + Q ++ ++ PD
Sbjct: 47 MQEDATAIWNALDNLPRGHDT--WDNFMSVVVHFWNYKDWPRVTQMCEWVLQGTTFRPDL 104
Query: 194 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 253
YN+ + A +I AE+ M+ + + TF L + Y AG FEKAE
Sbjct: 105 GCYNLLIDAYGKSLNIEDAEKTFNRMQ-EALCVPNEETFGVLINGYRLAGSFEKAEELFV 163
Query: 254 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLK 313
+++ R P N + VL + K
Sbjct: 164 QMQKRGYSPG-------------------------------PLACN----TFLHVLEDAK 188
Query: 314 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 373
+ AE F++ E +I N MI Y K G AE L RR PN T+
Sbjct: 189 EYRRAEALFRDLEKYECEPNIDTYNRMIVIYGKAGEPSKAEMLYRSMRRAMCPPNICTFT 248
Query: 374 IFSDYYLRNG 383
+ + R G
Sbjct: 249 ALMNAFARQG 258
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 68/164 (41%), Gaps = 12/164 (7%)
Query: 304 NMIQVLV---NLKDLPGAEKCFKEWESGCATY--DIRVTNVMIGAYAKEGRLENAEELKE 358
N + V+V N KD P + EW T+ D+ N++I AY K +E+AE+
Sbjct: 70 NFMSVVVHFWNYKDWPRVTQ-MCEWVLQGTTFRPDLGCYNLLIDAYGKSLNIEDAEKTFN 128
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 418
R + PN +T+ + + Y G + A + + G + P TF+
Sbjct: 129 RMQEALCVPNEETFGVLINGYRLAGSFEKAEELFVQMQKRG------YSPGPLACNTFLH 182
Query: 419 HFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTS 462
E K+ AE L+K + ++ + +I Y AG S
Sbjct: 183 VLEDAKEYRRAEALFRDLEKYECEPNIDTYNRMIVIYGKAGEPS 226
>gi|168005568|ref|XP_001755482.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693189|gb|EDQ79542.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 765
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/416 (20%), Positives = 173/416 (41%), Gaps = 33/416 (7%)
Query: 74 ALKLSENMEKRGMNK-TVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLL 130
A +L E ++K G+ TV+ + G A D+ + +++ + YG+++
Sbjct: 277 AFRLFEQLKKEGLQPDTVTYSTVIAGCAKTRDGYSKALALIEDIKASGLTQDAVIYGAMM 336
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
N + + +A+A ++M + + ++SL+ YA G ++ +++ ++A+ +
Sbjct: 337 NVCASQGLDREAQATFQEMCDAGFTPNLFHYSSLLNAYASRGKYQQAERVLEAIRAAGLT 396
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
P+ YN M A A S A V + ++ +G + D +F ++ Y ++ + ++A+
Sbjct: 397 PNLVVYNSLMNAYANCQMPSKAREVFDRIEAEG-LQRDMVSFCSMMDAYAKSDMLKEAQE 455
Query: 251 ALKELENRNAHR--------DLSA------------YQFLITLYGQTGNLSEVYRIWRSL 290
+ + DLS Y LI+ Y + G + V ++ +
Sbjct: 456 TFDSMIAQGMKPVYMLMQLLDLSGSLCSYGWWGSVGYSILISAYAKLGEMDGVLKLVDQI 515
Query: 291 RLAFPNTANISYLN-MIQVLVNLKDLPGAEKCFKEWES-GCATYDIRVTNVMIGAYAKEG 348
+I N +++V N + G K+ ++ GC + D N++IG +AKE
Sbjct: 516 EKGQNGECDILLFNTLLKVYCNAGYMDGVTAVLKKMDAEGCGS-DRGTFNILIGYFAKED 574
Query: 349 RLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVP 408
+ A + E RG PN T+ Y++NG M+ + LE G P
Sbjct: 575 LGDLALKTLEDMETRGHRPNEATYNALFQGYVKNGKMEEMFEALEAMKQRG------ITP 628
Query: 409 SSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPV 464
++ +++T M + +D + LK L V E L+ G+ V
Sbjct: 629 TNLSLQTIMLGCIEHNRIDVVLAYFPYLKATGIALSYSVMERLVEALVETGQMDVV 684
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 90/207 (43%), Gaps = 2/207 (0%)
Query: 162 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVND-ISGAERVIEEMK 220
NS+++ G +K + +++K + PD+ TY+ + A D S A +IE++K
Sbjct: 262 NSILSTMIYNGKIDKAFRLFEQLKKEGLQPDTVTYSTVIAGCAKTRDGYSKALALIEDIK 321
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
G + D + + ++ GL +A+ +E+ + +L Y L+ Y G
Sbjct: 322 ASG-LTQDAVIYGAMMNVCASQGLDREAQATFQEMCDAGFTPNLFHYSSLLNAYASRGKY 380
Query: 281 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 340
+ R+ ++R A + Y +++ N + A + F E+ D+ M
Sbjct: 381 QQAERVLEAIRAAGLTPNLVVYNSLMNAYANCQMPSKAREVFDRIEAEGLQRDMVSFCSM 440
Query: 341 IGAYAKEGRLENAEELKERARRRGADP 367
+ AYAK L+ A+E + +G P
Sbjct: 441 MDAYAKSDMLKEAQETFDSMIAQGMKP 467
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 118/282 (41%), Gaps = 41/282 (14%)
Query: 113 FVDLP---ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYA 169
F +LP E KN S+L+ +KA L E++K+ L ++ +++++ A
Sbjct: 245 FNELPLDSEVRKNVFVCNSILSTMIYNGKIDKAFRLFEQLKKEGLQPDTVTYSTVIAGCA 304
Query: 170 KT--GHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAA 227
KT G+ + + A+I+++KAS + D+ Y M A+ A+ +EM D
Sbjct: 305 KTRDGYSKAL-ALIEDIKASGLTQDAVIYGAMMNVCASQGLDREAQATFQEMC-DAGFTP 362
Query: 228 DWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW 287
+ +S+L + Y G +++AER L+ + +L Y L+ Y S+ ++
Sbjct: 363 NLFHYSSLLNAYASRGKYQQAERVLEAIRAAGLTPNLVVYNSLMNAYANCQMPSKAREVF 422
Query: 288 RSLRLAFPNTANISYLNM---------------------------IQVLVNLKDLPGAEK 320
+ +S+ +M + +L+ L DL G+
Sbjct: 423 DRIEAEGLQRDMVSFCSMMDAYAKSDMLKEAQETFDSMIAQGMKPVYMLMQLLDLSGSLC 482
Query: 321 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+ W G Y I +I AYAK G ++ +L ++ +
Sbjct: 483 SYGWW--GSVGYSI-----LISAYAKLGEMDGVLKLVDQIEK 517
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/284 (17%), Positives = 121/284 (42%), Gaps = 22/284 (7%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKM------------KELNLGFS--------SMP 160
++ +++ S+++ Y K M ++A+ + M + L+L S S+
Sbjct: 432 RDMVSFCSMMDAYAKSDMLKEAQETFDSMIAQGMKPVYMLMQLLDLSGSLCSYGWWGSVG 491
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEM-KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM 219
++ L++ YAK G + + ++ ++ K + D +N ++ + G V+++M
Sbjct: 492 YSILISAYAKLGEMDGVLKLVDQIEKGQNGECDILLFNTLLKVYCNAGYMDGVTAVLKKM 551
Query: 220 KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGN 279
+G +D TF+ L + + L + A + L+++E R + + Y L Y + G
Sbjct: 552 DAEG-CGSDRGTFNILIGYFAKEDLGDLALKTLEDMETRGHRPNEATYNALFQGYVKNGK 610
Query: 280 LSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
+ E++ +++ N+S ++ + + F ++ V
Sbjct: 611 MEEMFEALEAMKQRGITPTNLSLQTIMLGCIEHNRIDVVLAYFPYLKATGIALSYSVMER 670
Query: 340 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
++ A + G+++ ++ + G P+ KTW++ Y+ G
Sbjct: 671 LVEALVETGQMDVVKDALHLMQTTGQQPSQKTWDLVLQKYVSLG 714
>gi|255661216|gb|ACU25777.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 426
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 124/280 (44%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 6 SPDRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 65
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S I PD YN + A +I EM+ G V D ++S + ++Y
Sbjct: 66 IFSRLKRSGITPDLVAYNSMINVFGKAKLFKEARSLISEMRVAG-VMPDTVSYSTILTMY 124
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A +E+ N DL+ +I +YGQ E R++ S+R
Sbjct: 125 VENHKFLEALSVFREMREINCLLDLTTCNIMIDVYGQLDMAKEADRLFWSMRKMGIEPNV 184
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQE 244
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PNA T+ + + G + A +K +G
Sbjct: 245 MQNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSG 284
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 111/221 (50%), Gaps = 20/221 (9%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY +++ Y K L EKA L+++M+ + +++ ++++++++ K G ++ +
Sbjct: 217 QNVVTYNTMMMIYGKTLEHEKANNLIQEMQNRGIEPNAITYSTIISIWGKVGKLDRAAML 276
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S + D Y + A ++ A+R++ E+KR + D T LA
Sbjct: 277 FQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD-TAIHILAG--- 332
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + +D++ ++ +I L Y + N+ EV+ R L FP++
Sbjct: 333 -AGRIEEATWVFRQAIDAGEVKDITVFERMIDLFSKYRKYTNVGEVFEKMRGLGY-FPDS 390
Query: 298 ANISYLNMIQVLVN----LKDLPGAEKCFKEWES-GCATYD 333
N+I +++N L + A + + E + GC D
Sbjct: 391 ------NVIALVLNAYGKLHEFDKANEVYMEMQDEGCVFPD 425
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 101/236 (42%), Gaps = 7/236 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N ++Y +LL Y + +A L M+ N+ + + +N++M +Y KT EK +I
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLI 242
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
QEM+ I P++ TY+ + V + A + ++++ G V D + + Y
Sbjct: 243 QEMQNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSG-VEIDQVLYQTMIVAYER 301
Query: 242 AGLFEKAERALKELEN-RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
AGL A+R L EL+ N RD + I + G + E ++R A
Sbjct: 302 AGLVAHAKRLLHELKRPDNIPRDTA-----IHILAGAGRIEEATWVFRQAIDAGEVKDIT 356
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
+ MI + + + F++ D V +++ AY K + A E+
Sbjct: 357 VFERMIDLFSKYRKYTNVGEVFEKMRGLGYFPDSNVIALVLNAYGKLHEFDKANEV 412
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 83/200 (41%), Gaps = 4/200 (2%)
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
++ PD YTY+ + A +++M++D RV D +SNL + + + K
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEQD-RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 307
A L+ DL AY +I ++G+ E + +R+A +SY ++
Sbjct: 63 AISIFSRLKRSGITPDLVAYNSMINVFGKAKLFKEARSLISEMRVAGVMPDTVSYSTILT 122
Query: 308 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
+ V A F+E D+ N+MI Y + + A+ L R+ G +P
Sbjct: 123 MYVENHKFLEALSVFREMREINCLLDLTTCNIMIDVYGQLDMAKEADRLFWSMRKMGIEP 182
Query: 368 NAKTWEIFSDYYLRNGDMKL 387
N ++ Y GD +L
Sbjct: 183 NVVSYNTLLRVY---GDAEL 199
>gi|449453081|ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
gi|449489420|ref|XP_004158306.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
Length = 720
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 131/287 (45%), Gaps = 13/287 (4%)
Query: 117 PETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK 176
P+TS T+ ++++ TE+AEA+ E+MKE L FN+L+ YA+ G ++
Sbjct: 314 PKTS----TFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKE 369
Query: 177 IPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLA 236
+II EM+ S + PD +TY + + A A V A ++++M+ V + FS +
Sbjct: 370 AESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARN-VQPNTFIFSRIL 428
Query: 237 SIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPN 296
+ Y + G ++K L+E++N N D Y +I +G+ L + +
Sbjct: 429 ASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIE 488
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEWES----GCATYDIRVTNVMIGAYAKEGRLEN 352
+++ +I A + F+E + C T N+MI + ++ + +
Sbjct: 489 PDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPT----TYNIMINSLGEQEKWDE 544
Query: 353 AEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ L + + +G PN T+ D Y +G A+DCLE G
Sbjct: 545 VKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAG 591
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 145/384 (37%), Gaps = 64/384 (16%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSS------------------------- 158
LTY +L+ + EKA L+ +M++ GF S
Sbjct: 210 LTYNALIGACARNNDLEKALNLMSRMRQ--DGFQSDFINYSLIIQSLTRTNKIDIPLLQK 267
Query: 159 --------------MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 204
+ N ++ +AK G P + + ++AS + P + T+ + AL
Sbjct: 268 LYEEIESDKIELDGLLLNDIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFVAVISALG 327
Query: 205 AVNDISGAERVIEEMKRDG---RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 261
AE + EEMK G R+ A F+ L Y G ++AE + E+E
Sbjct: 328 NHGRTEEAEAIFEEMKEGGLKPRIKA----FNALLKGYARKGSLKEAESIISEMEKSGLS 383
Query: 262 RDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAE 319
D Y L+ Y G + + + R PNT S ++L + +D +
Sbjct: 384 PDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFS-----RILASYRDRGEWQ 438
Query: 320 KCF---KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 376
K F +E ++ D NVMI + K L++A E +R G +P+ TW
Sbjct: 439 KTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLI 498
Query: 377 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 436
D + ++G A + E+ + G ++P T + +++ D + L +
Sbjct: 499 DCHRKHGYHDRAAELFEEMQERG------YLPCPTTYNIMINSLGEQEKWDEVKILLGKM 552
Query: 437 KKAVDDLGVEVFEPLIRTYAAAGR 460
+ V + L+ Y +GR
Sbjct: 553 QSQGLLPNVVTYTTLVDIYGHSGR 576
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 102/242 (42%), Gaps = 7/242 (2%)
Query: 144 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 203
A++ ++ NL FS S+ L G EK+ + ++ P TYN + A
Sbjct: 164 AVVSWLQRHNLCFSYELLYSI--LIHALGRSEKLYEAFILSQKQTLTP--LTYNALIGAC 219
Query: 204 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA--ERALKELENRNAH 261
A ND+ A ++ M++DG +D+ +S + + ++ +E+E+
Sbjct: 220 ARNNDLEKALNLMSRMRQDG-FQSDFINYSLIIQSLTRTNKIDIPLLQKLYEEIESDKIE 278
Query: 262 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 321
D +I + + G+ + ++ + N +++ +I L N AE
Sbjct: 279 LDGLLLNDIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAI 338
Query: 322 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 381
F+E + G I+ N ++ YA++G L+ AE + + G P+ T+ + D Y
Sbjct: 339 FEEMKEGGLKPRIKAFNALLKGYARKGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYAN 398
Query: 382 NG 383
G
Sbjct: 399 VG 400
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y +L+N + + ++E+A M L S + NSL+ + + + +I+Q MK
Sbjct: 599 YNALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDIEAFSILQYMK 658
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
+ + PD TY M+AL V+ V EEM G
Sbjct: 659 ENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSG 696
>gi|110738150|dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
Length = 642
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 101/238 (42%), Gaps = 36/238 (15%)
Query: 162 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 221
N+L+ + K G E++ + ++MK + I P YTYN M L + + AERV E M+
Sbjct: 173 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVME- 231
Query: 222 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 281
GR+ D T++ + Y +AG +KA L+++E R D
Sbjct: 232 SGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEAD------------------ 273
Query: 282 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 341
I+Y+ MIQ D ++E + +++I
Sbjct: 274 -----------------KITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVI 316
Query: 342 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
G KEG+L + E R+G+ PN + + D Y ++G ++ A+ L + ID G
Sbjct: 317 GGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEG 374
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 129/303 (42%), Gaps = 14/303 (4%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLNCYCKELM 138
M++ G+ T+ ++ + +D+AE F ++ + +TY +++ YCK
Sbjct: 195 MKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQ 254
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTL----YAKTGHPEKIPAIIQEMKASSIMPDSY 194
T+KA +EK++++ + MT+ YA + + A+ QEM I +
Sbjct: 255 TQKA---MEKLRDMETRGHEADKITYMTMIQACYADSDFGSCV-ALYQEMDEKGIQVPPH 310
Query: 195 TYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE 254
+++ + L ++ V E M R G + ++ L Y ++G E A R L
Sbjct: 311 AFSLVIGGLCKEGKLNEGYTVFENMIRKGS-KPNVAIYTVLIDGYAKSGSVEDAIRLLHR 369
Query: 255 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 314
+ + D+ Y ++ + G + E + + R ++ Y ++I L
Sbjct: 370 MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGR 429
Query: 315 LPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA-RRRGADPNAKTW 372
+ AE+ F+E E GC T D N +I A+ K +++ A L +R G D T+
Sbjct: 430 VDEAERLFEEMSEKGC-TRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTY 488
Query: 373 EIF 375
I
Sbjct: 489 TIL 491
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 76/179 (42%), Gaps = 9/179 (5%)
Query: 79 ENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKE 136
ENM ++G V+ + +D AK ++ A + + + +TY ++N CK
Sbjct: 333 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 392
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 196
E+A + L +SM ++SL+ K G ++ + +EM DSY Y
Sbjct: 393 GRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCY 452
Query: 197 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE--KAERALK 253
N + A + A + + M+ + T++ L S G+F+ + E ALK
Sbjct: 453 NALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLS-----GMFKEHRNEEALK 506
>gi|356544457|ref|XP_003540667.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 711
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 124/283 (43%), Gaps = 2/283 (0%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
S N + Y +L++ YCK E+AE L +MK + + FN LM Y++ PE +
Sbjct: 370 VSSNAIVYNTLMDAYCKSNRVEEAEGLFIEMKTKGIKHTEATFNILMYAYSRKMQPEIVE 429
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISG-AERVIEEMKRDGRVAADWTTFSNLAS 237
++ EM+ + + P++ +Y + A ++S A +MK+DG + +++ L
Sbjct: 430 KLMAEMQDAGLKPNAKSYTCLISAYGKQKNMSDMAADAFLKMKKDG-IKPTSHSYTALIH 488
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
Y +G EKA A + ++ + Y L+ + + G+ + +IW+ +R
Sbjct: 489 AYSVSGWHEKAYAAFENMQREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMRRYKVEG 548
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
+++ ++ A ++ + + N+++ AYA+ G+ EL
Sbjct: 549 TRVTFNTLVDGFAKHGHYKEARDVISKFANVGLHPTVMTYNMLMNAYARGGQHSKLPELL 608
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 400
E P++ T+ +LR D A ++ + +G+
Sbjct: 609 EEMAAHNLKPDSVTYSTMIYAFLRVRDFSQAFFYHQEMVKSGQ 651
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 64/115 (55%), Gaps = 1/115 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+T+ +L++ + K ++A ++ K + L + M +N LM YA+ G K+P +++E
Sbjct: 551 VTFNTLVDGFAKHGHYKEARDVISKFANVGLHPTVMTYNMLMNAYARGGQHSKLPELLEE 610
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
M A ++ PDS TY+ + A V D S A +EM + G+V D+ ++ L +I
Sbjct: 611 MAAHNLKPDSVTYSTMIYAFLRVRDFSQAFFYHQEMVKSGQV-IDFNSYQKLRAI 664
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/313 (20%), Positives = 121/313 (38%), Gaps = 40/313 (12%)
Query: 46 FLKSKKRVFKWE---VGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAK 102
F K + KW +G +K L AL + +EK+G++ +D K
Sbjct: 327 FEKMNGKGVKWGEEVLGALIKSFCVEGLMSEALIILSELEKKGVSSNAIVYNTLMDAYCK 386
Query: 103 VQGIDAAENYFVDLPETSKNHL--TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMP 160
++ AE F+++ H T+ L+ Y +++ E E L+ +M++ L ++
Sbjct: 387 SNRVEEAEGLFIEMKTKGIKHTEATFNILMYAYSRKMQPEIVEKLMAEMQDAGLKPNAKS 446
Query: 161 FNSLMTLYAKTGHPEKIPA-IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM 219
+ L++ Y K + + A +MK I P S++Y + A + A E M
Sbjct: 447 YTCLISAYGKQKNMSDMAADAFLKMKKDGIKPTSHSYTALIHAYSVSGWHEKAYAAFENM 506
Query: 220 KRDG---------------RVAAD-------W------------TTFSNLASIYVEAGLF 245
+R+G R A D W TF+ L + + G +
Sbjct: 507 QREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMRRYKVEGTRVTFNTLVDGFAKHGHY 566
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
++A + + N H + Y L+ Y + G S++ + + +++Y M
Sbjct: 567 KEARDVISKFANVGLHPTVMTYNMLMNAYARGGQHSKLPELLEEMAAHNLKPDSVTYSTM 626
Query: 306 IQVLVNLKDLPGA 318
I + ++D A
Sbjct: 627 IYAFLRVRDFSQA 639
Score = 45.1 bits (105), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 89/242 (36%), Gaps = 35/242 (14%)
Query: 145 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 204
EKM + + +L+ + G + I+ E++ + ++ YN M A
Sbjct: 326 FFEKMNGKGVKWGEEVLGALIKSFCVEGLMSEALIILSELEKKGVSSNAIVYNTLMDAYC 385
Query: 205 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 264
N + AE + EMK G + TF+ L Y E E+ + E+++ +
Sbjct: 386 KSNRVEEAEGLFIEMKTKG-IKHTEATFNILMYAYSRKMQPEIVEKLMAEMQDAGLKPNA 444
Query: 265 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 324
+Y LI+ YG+ N+S++ A+ K
Sbjct: 445 KSYTCLISAYGKQKNMSDM---------------------------------AADAFLKM 471
Query: 325 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 384
+ G T +I AY+ G E A E +R G P+ +T+ D + R GD
Sbjct: 472 KKDGIKPTSHSYT-ALIHAYSVSGWHEKAYAAFENMQREGIKPSIETYTALLDAFRRAGD 530
Query: 385 MK 386
+
Sbjct: 531 TQ 532
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 131/295 (44%), Gaps = 6/295 (2%)
Query: 107 DAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSL 164
D E F ++ E + N +T+ L+ +C+ M E+A +L++M E ++ N +
Sbjct: 264 DDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIV 323
Query: 165 MTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGR 224
+ K G + + M + PD+ +Y ++ L + A+ +++EM R+
Sbjct: 324 INSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNN- 382
Query: 225 VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVY 284
+ TF+ I + GL E+A +++++ + Y L+ + G++
Sbjct: 383 CPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSAL 442
Query: 285 RIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAY 344
++RS+ PNT I+Y ++ L N + L A + E ++ NV++ +
Sbjct: 443 ELFRSMPCK-PNT--ITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFF 499
Query: 345 AKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
++G L+ A EL E+ G PN T+ D ++ + A++ L + G
Sbjct: 500 CQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKG 554
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/270 (18%), Positives = 112/270 (41%), Gaps = 3/270 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY LL CK E+A A+L++M+ + + +N ++ + G + ++
Sbjct: 176 NVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLL 235
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+ + PD+ +Y ++ L A E + EM + + TF L +
Sbjct: 236 NRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMM-EKNCMPNEVTFDMLIRFFCR 294
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G+ E+A + L+++ + + +I + G + + ++ ++ N IS
Sbjct: 295 GGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTIS 354
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
Y +++ L + A++ KE + C ++ N I ++G +E A L E+
Sbjct: 355 YTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTF-NTFICILCQKGLIEQAIMLIEQM 413
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
+ G T+ + + G + A++
Sbjct: 414 QEHGCTVGVVTYNALVNGFCVQGHIDSALE 443
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 125/296 (42%), Gaps = 20/296 (6%)
Query: 200 MRALAAVNDISGAERVIE-EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
+R L A D++GA R++E RDG A D + L G A R L+ E
Sbjct: 46 LRRLIAREDLAGAARLVELSASRDGE-APDVYLCTKLIRNLCRRGRTSDAARVLRAAEGS 104
Query: 259 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 318
+ D+ AY L+ Y + G+L R+ S+ +A P+ +Y +I+VL + + A
Sbjct: 105 GSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMPVA-PDA--YTYTPLIRVLCDRGRVADA 161
Query: 319 EKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 377
+ GC + T V++ A K E A + + R +G PN T+ + +
Sbjct: 162 LSLLDDMLRRGCQPNVVTYT-VLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIIN 220
Query: 378 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG-FLEIL 436
R G + A D L + G P + + T ++ K D E F E++
Sbjct: 221 GMCREGRVDDARDLLNRLFSYG------CQPDTVSYTTLLKGLCASKRWDDVEELFAEMM 274
Query: 437 KKAVDDLGVEV-FEPLIRTYAAAG---RTSPVMLRRLKMEKVEVSEASKKLLEAIC 488
+K + + EV F+ LIR + G R V+ + + E + ++ +IC
Sbjct: 275 EK--NCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSIC 328
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/279 (19%), Positives = 114/279 (40%), Gaps = 6/279 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +T+ + + C++ + E+A L+E+M+E + +N+L+ + GH I + +
Sbjct: 386 NEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGH---IDSAL 442
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYV 240
+ ++ P++ TY + L + A ++ EM RD + TF+ L + +
Sbjct: 443 ELFRSMPCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRD--CPPNVVTFNVLVNFFC 500
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
+ G ++A ++++ +L Y L + + + + L + I
Sbjct: 501 QKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVI 560
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
++ ++I +L + A + F + V N ++ K ++NA +
Sbjct: 561 TFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYM 620
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
G PN T+ I + R G +K A D L G
Sbjct: 621 VSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRG 659
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/335 (18%), Positives = 128/335 (38%), Gaps = 45/335 (13%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
+N+L+ Y + GH + +I M + PD+YTY +R L ++ A ++++M
Sbjct: 113 YNTLVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDML 169
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
R G + T++ L + FE+A L E+ + ++ Y +I + G +
Sbjct: 170 RRG-CQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRV 228
Query: 281 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE-WESGC----ATYDIR 335
+ + L +SY +++ L K E+ F E E C T+D+
Sbjct: 229 DDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDML 288
Query: 336 V------------------------------TNVMIGAYAKEGRLENAEELKERARRRGA 365
+ N++I + K+GR+++A + G
Sbjct: 289 IRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGC 348
Query: 366 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKD 425
+P+ ++ R A + L++ + P+ T TF+ Q+
Sbjct: 349 NPDTISYTTVLKGLCRAERWNDAKELLKEMVRN------NCPPNEVTFNTFICILCQKGL 402
Query: 426 VDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 460
++ A +E +++ +GV + L+ + G
Sbjct: 403 IEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGH 437
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 67/367 (18%), Positives = 143/367 (38%), Gaps = 16/367 (4%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKN--HLTYGSLLN 131
A+++ + M + + I ++ + K +D A + ++ N ++Y ++L
Sbjct: 301 AIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLK 360
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C+ A+ LL++M N + + FN+ + + + G E+ +I++M+
Sbjct: 361 GLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTV 420
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
TYN + I A E+ R + T++ L + A + A
Sbjct: 421 GVVTYNALVNGFCVQGHIDSAL----ELFRSMPCKPNTITYTTLLTGLCNAERLDAAAEL 476
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVL 309
+ E+ +R+ ++ + L+ + Q G L E + + PN I+Y + +
Sbjct: 477 VAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNL--ITYNTLFDGI 534
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
A + S + D+ + +IG +KE R+E A ++ A+ G P A
Sbjct: 535 TKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKA 594
Query: 370 KTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 429
+ + ++ A+D L + G +P+ T + +E + A
Sbjct: 595 LVYNKILLGLCKRHEIDNAIDFLAYMVSNG------CMPNESTYIILIEGLAREGLLKEA 648
Query: 430 EGFLEIL 436
+ L +L
Sbjct: 649 QDLLSML 655
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 115/296 (38%), Gaps = 6/296 (2%)
Query: 106 IDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLM 165
+DAA +P + + TY L+ C A +LL+ M + + + L+
Sbjct: 126 LDAARRLIGSMP-VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLL 184
Query: 166 TLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRV 225
K E+ A++ EM+A P+ TYNV + + + A ++ + G
Sbjct: 185 EAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYG-C 243
Query: 226 AADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 285
D +++ L + ++ E E+ +N + + LI + + G + +
Sbjct: 244 QPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQ 303
Query: 286 IWRSLRLAFPNTANISYLNM-IQVLVNLKDLPGAEKCFKEWES-GCATYDIRVTNVMIGA 343
+ + + N + N+ I + + A K S GC I T V+ G
Sbjct: 304 VLQQMT-EHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGL 362
Query: 344 YAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
E R +A+EL + R PN T+ F + G ++ A+ +E+ + G
Sbjct: 363 CRAE-RWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHG 417
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 115/261 (44%), Gaps = 1/261 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
TY L+N CKE + A L +M + L + + F +L+ + TG + I Q+
Sbjct: 296 FTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQ 355
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + PD TYN + L V D+ A++++ EM + G + D T++ L + G
Sbjct: 356 MLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRG-LKPDKFTYTMLIDGCCKEG 414
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
E A KE+ D A+ LI+ + + G + E R R + A + +Y
Sbjct: 415 DLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYT 474
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I D+ K KE + + NV++ K+G+++NA L +
Sbjct: 475 MVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNL 534
Query: 364 GADPNAKTWEIFSDYYLRNGD 384
G P+ T+ I + + ++G+
Sbjct: 535 GVVPDDITYNILLEGHCKHGN 555
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 132/320 (41%), Gaps = 11/320 (3%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
+ L++ CKE +A+ L ++ + L + + FN+L+ Y K+G+ ++ + + M
Sbjct: 228 FNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMM 287
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
+ + PD +TY+V + L + A ++ EM G V D TF+ L + + G
Sbjct: 288 ENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPND-VTFTTLINGHCVTGRA 346
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
+ +++ + D+ Y LI + G+L E ++ + +Y +
Sbjct: 347 DLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTML 406
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
I DL A + KE D +I + +EG++ AE G
Sbjct: 407 IDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGI 466
Query: 366 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKD 425
P+ T+ + + + GD+K L++ + DG VP T + ++
Sbjct: 467 KPDDATYTMVIHGFCKKGDVKTGFKLLKEM----QCDG--HVPGVVTYNVLLNGLCKQGQ 520
Query: 426 VDGAEGFLEILKKAVDDLGV 445
+ A L+ A+ +LGV
Sbjct: 521 MKNANMLLD----AMLNLGV 536
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 143/332 (43%), Gaps = 10/332 (3%)
Query: 94 AIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLNCYCKELMTEKAEALLEKMKE 151
AI + ++ K + +A N F L E S + +Y SL++ + +A + +KM+E
Sbjct: 177 AIVISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEE 236
Query: 152 LNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDIS 210
+ + +N ++ ++ K G P KI +++++MK+ I PD+YTYN + +
Sbjct: 237 EGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQ 296
Query: 211 GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 270
A +V EEMK G + D T++ L +Y ++ ++A + L E+E + Y L
Sbjct: 297 EAAQVFEEMKAAG-FSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSL 355
Query: 271 ITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCA 330
I+ Y + G L E + + +Y ++ + A F+E +
Sbjct: 356 ISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGC 415
Query: 331 TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
+I N I Y G+ + ++ + G P+ TW + +NG M V
Sbjct: 416 KPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNG-MDSEVS 474
Query: 391 CLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ 422
+ K + +VP ET T + + +
Sbjct: 475 GVFKEMKR-----AGFVPERETFNTLISAYSR 501
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 129/308 (41%), Gaps = 10/308 (3%)
Query: 71 YYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK------NHL 124
Y A+ + + ME+ G T+ + L++ K + N L E K +
Sbjct: 224 YREAVNVFKKMEEEGCKPTLITYNVILNVFGK---MGTPWNKITSLVEKMKSDGIAPDAY 280
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY +L+ C + + ++A + E+MK + +N+L+ +Y K+ P++ ++ EM
Sbjct: 281 TYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEM 340
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ + P TYN + A A + A + +M G D T++ L S + AG
Sbjct: 341 ELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKG-TKPDVFTYTTLLSGFERAGK 399
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
E A +E+ N ++ + I +YG G ++ +I+ + + + +++
Sbjct: 400 VESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNT 459
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
++ V FKE + + N +I AY++ G E A + R G
Sbjct: 460 LLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAG 519
Query: 365 ADPNAKTW 372
P+ T+
Sbjct: 520 VTPDLSTY 527
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 110/255 (43%), Gaps = 5/255 (1%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSS--MPFNSLMTLYAKTGHPEKI 177
S + +TY +LL+ Y K ++A +L +M ELN GFS + +NSL++ YA+ G ++
Sbjct: 311 SHDKVTYNALLDVYGKSHRPKEAMKVLNEM-ELN-GFSPSIVTYNSLISAYARDGMLDEA 368
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
+ +M PD +TY + + A + EEM+ G + TF+
Sbjct: 369 MELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAG-CKPNICTFNAFIK 427
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
+Y G F + E+ D+ + L+ ++GQ G SEV +++ ++ A
Sbjct: 428 MYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP 487
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
++ +I A ++ T D+ N ++ A A+ G E +E++
Sbjct: 488 ERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVL 547
Query: 358 ERARRRGADPNAKTW 372
PN T+
Sbjct: 548 AEMEDGRCKPNELTY 562
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/363 (21%), Positives = 139/363 (38%), Gaps = 38/363 (10%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A+K+ ME G + ++ + A+ +D A + E T + TY +LL+
Sbjct: 333 AMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLS 392
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ + E A + E+M+ + FN+ + +Y G + I E+ + P
Sbjct: 393 GFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSP 452
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D T+N + S V +EMKR G V + TF+ L S Y G FE+A
Sbjct: 453 DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP-ERETFNTLISAYSRCGSFEQAMTV 511
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI---------------WRSLRLAFPN 296
+ + + DLS Y ++ + G + ++ + SL A+ N
Sbjct: 512 YRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYAN 571
Query: 297 TANISYLN--------------------MIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 336
I ++ ++ V LP AE+ F E + + DI
Sbjct: 572 GKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITT 631
Query: 337 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 396
N M+ Y + + A E+ + + RG P+ T+ + R+ D + + L + +
Sbjct: 632 LNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREIL 691
Query: 397 DTG 399
G
Sbjct: 692 AKG 694
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 131/329 (39%), Gaps = 14/329 (4%)
Query: 135 KELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSY 194
KE A L ++E + SL++ +A +G + + ++M+ P
Sbjct: 185 KEGRVSSAANLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEEGCKPTLI 244
Query: 195 TYNVWMRALAAV----NDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
TYNV + + N I+ ++E+MK DG +A D T++ L + L ++A +
Sbjct: 245 TYNVILNVFGKMGTPWNKITS---LVEKMKSDG-IAPDAYTYNTLITCCKRGSLHQEAAQ 300
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
+E++ D Y L+ +YG++ E ++ + L + + ++Y ++I
Sbjct: 301 VFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYA 360
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
L A + + D+ ++ + + G++E+A + E R G PN
Sbjct: 361 RDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNIC 420
Query: 371 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 430
T+ F Y G VD + K D G P T T + F Q
Sbjct: 421 TFNAFIKMYGNRGKF---VDMM-KIFDEINVCG--LSPDIVTWNTLLAVFGQNGMDSEVS 474
Query: 431 GFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
G + +K+A E F LI Y+ G
Sbjct: 475 GVFKEMKRAGFVPERETFNTLISAYSRCG 503
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 108/257 (42%), Gaps = 1/257 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY ++L + M E++E +L +M++ + + + SL+ YA + ++ +E+
Sbjct: 526 TYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEV 585
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ I P + + + + + AER E+K G + D TT +++ SIY +
Sbjct: 586 YSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERG-FSPDITTLNSMVSIYGRRQM 644
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
KA L ++ R ++ Y L+ ++ ++ + + I R + ISY
Sbjct: 645 VGKANEVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNT 704
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+I + A + F E D+ N IG+YA + E A + + G
Sbjct: 705 VIYAYCRNTRMRDASRIFSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHG 764
Query: 365 ADPNAKTWEIFSDYYLR 381
PN T+ D Y +
Sbjct: 765 CRPNQNTYNSIVDGYCK 781
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 3/214 (1%)
Query: 99 LVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGF 156
+ +K + AE F +L E S + T S+++ Y + M KA +L+ MKE
Sbjct: 603 VCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTP 662
Query: 157 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
S +NSLM +++++ K I++E+ A I PD +YN + A + A R+
Sbjct: 663 SMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIF 722
Query: 217 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 276
EM RD + D T++ Y +FE+A ++ + + + Y ++ Y +
Sbjct: 723 SEM-RDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCK 781
Query: 277 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
E LR P+ L +++ +V
Sbjct: 782 LNRKDEAKLFVEDLRNLDPHAPKGEDLRLLERIV 815
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 158/389 (40%), Gaps = 54/389 (13%)
Query: 65 LRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKN 122
+++RK ++ A +L + M RG+ +D K +DAAE+ F + S +
Sbjct: 330 VKERK-FFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPD 388
Query: 123 HLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQ 182
T+ +L++ YC + LL +M E L + +N+L+ + G + Q
Sbjct: 389 VFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQ 448
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRD----------GRVAADWTTF 232
+M +S + PD T N + L + A + + M++ V D T+
Sbjct: 449 QMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTY 508
Query: 233 SNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL 292
+ L S + G F +AE KE+ +R
Sbjct: 509 NILISGLINEGKFLEAEELYKEMPHRG--------------------------------- 535
Query: 293 AFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLEN 352
PNT I+Y +MI L L A + F S + D+ N ++ Y K GR+++
Sbjct: 536 IVPNT--ITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDD 593
Query: 353 AEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSET 412
EL RRG +A T+ + + G++ A+D ++ I +G P + T
Sbjct: 594 GLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSG------VYPDTIT 647
Query: 413 IRTFMRHFEQEKDVDGAEGFLEILKKAVD 441
IR+ + ++++ A LE L+ ++D
Sbjct: 648 IRSMLTVLWSKEELKRAVAMLEDLQMSMD 676
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 145/341 (42%), Gaps = 16/341 (4%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +T+ +L+N C+E +A ALL++M E L + + + +++ K G ++
Sbjct: 177 NVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLL 236
Query: 182 QEM-KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
++M + S I P+ Y+ + L S A + EM+ G + D T++ + +
Sbjct: 237 RKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKG-IFPDLFTYNCMIDGFC 295
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTA 298
+G + +A+R L+E+ R + ++ Y LI Y + E ++ + R PNT
Sbjct: 296 SSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNT- 354
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
I+Y +MI L AE F + + D+ N +I Y R+++ EL
Sbjct: 355 -ITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLH 413
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 418
G + T+ + GD+ A+D ++ I +G P T T +
Sbjct: 414 EMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSG------VCPDIVTCNTLLD 467
Query: 419 HF-EQEKDVDGAEGFLEILKKAVDDLGVEVF---EPLIRTY 455
+ K D E F + K +D F EP ++TY
Sbjct: 468 GLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTY 508
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 140/347 (40%), Gaps = 23/347 (6%)
Query: 109 AENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMT 166
A N + ++ E + TY +++ +C +A+ LL++M E + + + +++L+
Sbjct: 268 AHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALIN 327
Query: 167 LYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA 226
Y K + + EM I+P++ TYN + N + AE + M G +
Sbjct: 328 AYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKG-CS 386
Query: 227 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
D TF+ L Y A + L E+ D + Y LI + G+L+ +
Sbjct: 387 PDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDL 446
Query: 287 WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESG-----------CATYDIR 335
+ + + ++ ++ L + L A + FK + D++
Sbjct: 447 SQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQ 506
Query: 336 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 395
N++I EG+ AEEL + RG PN T+ + NG K + L++A
Sbjct: 507 TYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYS-----SMINGLCKQSR--LDEA 559
Query: 396 IDTGRGDGGK-WVPSSETIRTFMRHFEQEKDV-DGAEGFLEILKKAV 440
G K + P T T + + + V DG E F E+ ++ +
Sbjct: 560 TQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGI 606
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 6/159 (3%)
Query: 109 AENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMT 166
AE + ++P N +TY S++N CK+ ++A + + M + + FN+L++
Sbjct: 524 AEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVS 583
Query: 167 LYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA 226
Y K G + + EM I+ D+ TY + V +I+GA + +EM G
Sbjct: 584 GYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYP 643
Query: 227 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 265
T S L ++ + E+ +RA+ LE+ DLS
Sbjct: 644 DTITIRSMLTVLWSK----EELKRAVAMLEDLQMSMDLS 678
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/402 (17%), Positives = 151/402 (37%), Gaps = 21/402 (5%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK---NHLTYGSLL 130
A+ L + M + G+ +D + K+ +A N + E S N + Y +++
Sbjct: 197 AVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAII 256
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
+ K+ A L +M+E + +N ++ + +G + ++QEM I
Sbjct: 257 DGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKIN 316
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
P+ TY+ + A AE + +EM G + + T++++ + + + AE
Sbjct: 317 PNVVTYSALINAYVKERKFFEAEELYDEMLPRG-IIPNTITYNSMIDGFCKQNRLDAAEH 375
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
+ + D+ + LI Y + + + + +Y +I
Sbjct: 376 MFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFC 435
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR-------- 362
+ DL A ++ S DI N ++ G+L++A E+ + ++
Sbjct: 436 LVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDAS 495
Query: 363 ---RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
G +P+ +T+ I + G A + ++ G VP++ T + +
Sbjct: 496 RPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRG------IVPNTITYSSMING 549
Query: 420 FEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 461
++ +D A + + V F L+ Y AGR
Sbjct: 550 LCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRV 591
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 61/341 (17%), Positives = 127/341 (37%), Gaps = 49/341 (14%)
Query: 157 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
S + FN LM + + P+ + ++ Q+M+ I D Y++N+ ++ + + + A
Sbjct: 76 SVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIKCFCSCSKLPFALSTF 135
Query: 217 EEMKRDGRVAADWTTFSN-LASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYG 275
++ + G D TFS L + VE ++ AL +L ++ ++ + L+
Sbjct: 136 GKITKLG-FQPDVVTFSTLLHGLCVE----DRVSEAL-DLFHQMCRPNVVTFTTLMNGLC 189
Query: 276 QTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE----------- 324
+ G + E + + I+Y ++ + + D A ++
Sbjct: 190 REGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNV 249
Query: 325 ----------WESGCAT---------------YDIRVTNVMIGAYAKEGRLENAEELKER 359
W+ G + D+ N MI + GR A+ L +
Sbjct: 250 VIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQE 309
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
R +PN T+ + Y++ A + ++ + G +P++ T + +
Sbjct: 310 MLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRG------IIPNTITYNSMIDG 363
Query: 420 FEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 460
F ++ +D AE ++ V F LI Y A R
Sbjct: 364 FCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKR 404
>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
Length = 834
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 142/338 (42%), Gaps = 9/338 (2%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
T+GSL+N +CK M E + LL +MK+ L + +N+++ K G K ++EM
Sbjct: 280 TFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEM 339
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ PD TYN + + ++ AE+++E+ R G +A + T++ L Y + G
Sbjct: 340 SENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRG-LAPNKLTYTPLVHGYCKQGE 398
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW-RSLRLAFPNTANISYL 303
+ KA L E+ D+ +Y LI G + I R + ANI Y
Sbjct: 399 YTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANI-YN 457
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
++ L L A+ E D V ++ + + G L+ A++L + +
Sbjct: 458 VLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEK 517
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQE 423
G DP + + + ++G M A+ C++K VP T T + + ++
Sbjct: 518 GLDPGVVGYNVMIKGFSKSGMMDNAILCIDKM------RRAHHVPDIFTFSTIIDGYVKQ 571
Query: 424 KDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 461
+++ ++ K V + LI Y G T
Sbjct: 572 HNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGET 609
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 128/313 (40%), Gaps = 7/313 (2%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +L+N +C E+AE LLE+ L + + + L+ Y K G K + E
Sbjct: 349 VTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIE 408
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M S + D +Y + L ++ A + + M G + D ++ L + + G
Sbjct: 409 MSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRG-ILPDANIYNVLMNGLFKKG 467
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
A+ L E+ ++N D Y L+ + + GNL E ++++ + + + Y
Sbjct: 468 KLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYN 527
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
MI+ + A C + DI + +I Y K+ + ++ ++
Sbjct: 528 VMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQ 587
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQE 423
PN T+ + Y R G+ K+A EK R G K PS T + F +E
Sbjct: 588 NCKPNVVTYTSLINGYCRKGETKMA----EKLFSMMRSHGLK--PSVVTYSILIGSFCKE 641
Query: 424 KDVDGAEGFLEIL 436
+ A + E++
Sbjct: 642 AKLGKAVSYFELM 654
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 110/274 (40%), Gaps = 1/274 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
+ N LTY L++ YCK+ KA L +M L + + +L+ G +
Sbjct: 380 APNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALT 439
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I M I+PD+ YNV M L +S A+ ++ EM D +A D ++ L +
Sbjct: 440 IRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEM-LDQNIAPDAFVYATLVDGF 498
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
+ G ++A++ + + + + Y +I + ++G + +R A
Sbjct: 499 IRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDI 558
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
++ +I V ++ K F ++ +I Y ++G + AE+L
Sbjct: 559 FTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSM 618
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
R G P+ T+ I + + + AV E
Sbjct: 619 MRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFE 652
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 112/299 (37%), Gaps = 45/299 (15%)
Query: 143 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE-MKASSIMPDSYTYNVWMR 201
E LE+MK + + ++ YA G +K + +K + +P +Y N +
Sbjct: 118 EFTLEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLN 177
Query: 202 ALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYVEAGLFEKA--ERALKELENR 258
L I A ++ +EM RD D N + + GL K E +K +E+R
Sbjct: 178 LLVKHRRIETAHQLYDEMIDRDN---GDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESR 234
Query: 259 ---NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPN----------------- 296
++ Y LI Y + G + Y++++ L++ P
Sbjct: 235 WGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMF 294
Query: 297 ---------------TANIS-YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 340
+ N+ Y N+I L A+ KE C D+ N +
Sbjct: 295 EAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTL 354
Query: 341 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
I + G +E AE+L E+ RRG PN T+ Y + G+ A D L + +G
Sbjct: 355 INHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSG 413
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 145/317 (45%), Gaps = 19/317 (5%)
Query: 89 TVSDQAIHLDLVAKVQGIDAAENY---FVDLPETSKNH-----LTYGSLLNCYCKELMTE 140
V D AI+ L++ G A+++ F L E KNH +TY ++++ CK T+
Sbjct: 41 CVPDDAIYNALIS---GYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTK 97
Query: 141 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 200
A LL++M++ + +N ++ + ++ +++EM PD TYN ++
Sbjct: 98 DAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFI 157
Query: 201 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 260
+ L + + A + + M V D +++ + + ++G + A R L ++ NR
Sbjct: 158 KGLCKCDRVDEARKFLARMP----VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGC 213
Query: 261 HRDLSAYQFLITLYGQTGNLSEVYRIWRS-LRLAF-PNTANISYLNMIQVLVNLKDLPGA 318
D+ Y LI + + G + + S L+L PN ++Y +++ L L + A
Sbjct: 214 TPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNM--VAYNSLLGALHRLGHIGKA 271
Query: 319 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 378
E E E T D+ N I K R++ A+ + +R RG PNA ++ + +
Sbjct: 272 EDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEE 331
Query: 379 YLRNGDMKLAVDCLEKA 395
+ ++ A+ +E+A
Sbjct: 332 LCKKKELDDAITLVEQA 348
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 122/303 (40%), Gaps = 4/303 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCY 133
A K+ E M RG V + + K +D A + +P T + ++Y +++N
Sbjct: 134 AKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTP-DVVSYTTVINGL 192
Query: 134 CKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDS 193
CK + A +L++M + ++SL+ + K G E+ ++ M P+
Sbjct: 193 CKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNM 252
Query: 194 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 253
YN + AL + I AE ++ EM+R G D +++ +A +KA+
Sbjct: 253 VAYNSLLGALHRLGHIGKAEDMLVEMERRG-FTPDVVSYNACIDGLCKAERVKKAKAVFD 311
Query: 254 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLK 313
+ R + S+Y L+ + L + + R + + Y ++ L
Sbjct: 312 RMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGG 371
Query: 314 DLPGAEKCF-KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
A F K + D+ NVM+ ++ K +++ A ++ ++ R N TW
Sbjct: 372 RFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNC-CNVVTW 430
Query: 373 EIF 375
I
Sbjct: 431 NIL 433
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 102/244 (41%), Gaps = 8/244 (3%)
Query: 158 SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIE 217
+ F L+ ++ EK ++ MK +PD YN + + D A + +
Sbjct: 10 AFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLA 69
Query: 218 EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQT 277
EM ++ T++N+ +AG + A + L E+ ++ ++ Y ++ +
Sbjct: 70 EMVKN-HCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEE 128
Query: 278 GNLSEVYRIWR--SLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 335
L E ++ ++R FP+ ++Y + I+ L + A K T D+
Sbjct: 129 RKLDEAKKMLEEMAVRGYFPDV--VTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVV 183
Query: 336 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 395
+I K G L++A + ++ RG P+ T+ D + + G+++ A+ L+
Sbjct: 184 SYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSM 243
Query: 396 IDTG 399
+ G
Sbjct: 244 LKLG 247
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/345 (20%), Positives = 138/345 (40%), Gaps = 22/345 (6%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
+ + +TY SL++ +CK E+A LL+ M +L + + +NSL+ + GH K
Sbjct: 213 CTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAE 272
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
++ EM+ PD +YN + L + A+ V + M G + +++S L
Sbjct: 273 DMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERG-CTPNASSYSMLVEE 331
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL---RLAFP 295
+ + A +++ + D+ Y L+ + G E ++ + ++ P
Sbjct: 332 LCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEP 391
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAE 354
+ Y M+ + + A + K+ E C ++ N+++ + RL +AE
Sbjct: 392 DV--FFYNVMLDSHCKRRQIDKALQIHKQMLERNCC--NVVTWNILVHGLCVDDRLSDAE 447
Query: 355 ELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIR 414
+ G P+ T+ D + G A++ E+A+ G VP T
Sbjct: 448 TMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVK------GGCVPDVVTYS 501
Query: 415 TFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
+ E + E +L K L V ++ +I YA G
Sbjct: 502 ALITGLVHENMAE--EAYLLFTK-----LDVALWNAMILGYAENG 539
Score = 42.0 bits (97), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 128/321 (39%), Gaps = 27/321 (8%)
Query: 79 ENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK------NHLTYGSLLNC 132
+ M +RG S ++ ++ + K + +D A + L E ++ + L Y LL+
Sbjct: 311 DRMVERGCTPNASSYSMLVEELCKKKELDDA----ITLVEQAREKYQIVDILLYTVLLDG 366
Query: 133 YCKELMTEKAEALL-----EKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 187
CK ++A AL EK+ E ++ F +N ++ + K +K I ++M
Sbjct: 367 LCKGGRFDEACALFSKVLDEKICEPDVFF----YNVMLDSHCKRRQIDKALQIHKQMLER 422
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
+ + T+N+ + L + +S AE ++ M +G + D+ T+ L + G
Sbjct: 423 NCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIP-DFVTYGTLVDAMCKCGKSAA 480
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 307
A +E D+ Y LIT E Y ++ L +A N + Y
Sbjct: 481 ALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLDVALWNAMILGYAENGS 540
Query: 308 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
+ LK E + E T+ ++ G K L A L +RA + G P
Sbjct: 541 GDLGLKLF--VELIESDVEPNARTFGKEIS----GKLVKAESLGKARGLFDRAVKGGFFP 594
Query: 368 NAKTWEIFSDYYLRNGDMKLA 388
+ D + + GD++ A
Sbjct: 595 DLFVANTLIDVFAKCGDLEEA 615
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 103/436 (23%), Positives = 186/436 (42%), Gaps = 22/436 (5%)
Query: 44 NQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKV 103
N+FL K + LK LRD+ L AL++ M + G+ TV+ L K
Sbjct: 196 NRFLPDVKNCNR-----ILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKG 250
Query: 104 QGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPF 161
+ A + + E + +T+ L+N K+ ++A+ L+++M + L S +
Sbjct: 251 GEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTY 310
Query: 162 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 221
N L+ Y K G + A+ +EM + P ++N M +S A + + +M +
Sbjct: 311 NPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLK 370
Query: 222 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 281
+ D +++ L + G +A L EL RN ++ Y LI + G+L
Sbjct: 371 K-NLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLE 429
Query: 282 EVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTN 338
++ + R P+ ++Y ++ L ++ A++ F E G A T
Sbjct: 430 TALKLKEDMINRGIHPDV--VTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTA 487
Query: 339 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 398
++G K G A +L+E +G P+ T+ +F + + G+++ A + L+K I
Sbjct: 488 RIVGE-LKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRD 546
Query: 399 GRGDGGKWVPSSETIRTFMR-HFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAA 457
G VP T +FM H E +G E F ++L + V + LI +A
Sbjct: 547 GH------VPDHVTYTSFMHAHMENGHLREGREIFYDMLSRG-QTPTVVTYTVLIHAHAL 599
Query: 458 AGRTSPVMLRRLKMEK 473
GR M L+M++
Sbjct: 600 NGRLDWAMAYFLEMQE 615
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/379 (20%), Positives = 158/379 (41%), Gaps = 8/379 (2%)
Query: 24 ALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEK 83
L + L KKG + + + K+ RV + + + L AL L E M
Sbjct: 277 VLINGLSKKGELQ-QAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVT 335
Query: 84 RGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEK 141
RG++ TV+ + K + A D+ + + + ++Y +L+ +C+ +
Sbjct: 336 RGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGE 395
Query: 142 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 201
A LL++++ NL F+ + +N+L+ + G E + ++M I PD TY V +
Sbjct: 396 AFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVN 455
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 261
+ ++ A+ +EM G +A D ++ ++ G KA + +E+ +
Sbjct: 456 GACKLGNMLMAKEFFDEMLHVG-LAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFP 514
Query: 262 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 321
D+ Y + + GNL E + + + +++Y + + + L +
Sbjct: 515 PDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREI 574
Query: 322 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 381
F + S T + V+I A+A GRL+ A + +G PN T+ + + + +
Sbjct: 575 FYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCK 634
Query: 382 NGDM----KLAVDCLEKAI 396
M K ++ EK I
Sbjct: 635 VRKMDQACKFFIEMQEKGI 653
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 129/327 (39%), Gaps = 48/327 (14%)
Query: 60 DTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET 119
D L +L D + ALKL E+M RG IH D+V
Sbjct: 420 DGLCRLGDLE---TALKLKEDMINRG---------IHPDVV------------------- 448
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
TY L+N CK A+ ++M + L + + + K G K
Sbjct: 449 -----TYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFK 503
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+ +EM PD TYNV++ L + ++ A ++++M RDG V D T+++ +
Sbjct: 504 LQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHV-PDHVTYTSFMHAH 562
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL--SEVYRIWRSLRLAFPNT 297
+E G + ++ +R + Y LI + G L + Y + + PN
Sbjct: 563 MENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNV 622
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGC----ATYDIRVT-NVMIGAYAKEGRLE 351
I+Y +I ++ + A K F E E G TY I + N +G + + RL
Sbjct: 623 --ITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLY 680
Query: 352 NAEELKERARRRGADPNAKTWEIFSDY 378
A+ L +R R A ++ DY
Sbjct: 681 -AQMLGKRIRPDSCTHGALLKKLDKDY 706
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 65/154 (42%), Gaps = 3/154 (1%)
Query: 80 NMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKEL 137
+M RG TV + + A +D A YF+++ E N +TY L+N +CK
Sbjct: 577 DMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVR 636
Query: 138 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 197
++A +M+E + + + L+ G ++ + +M I PDS T+
Sbjct: 637 KMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHG 696
Query: 198 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTT 231
++ L + A + IE + DG D T
Sbjct: 697 ALLKKLDKDYKVQ-AVQFIESLILDGDRTIDANT 729
>gi|226507918|ref|NP_001144813.1| uncharacterized protein LOC100277891 [Zea mays]
gi|195647376|gb|ACG43156.1| hypothetical protein [Zea mays]
Length = 597
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/364 (20%), Positives = 145/364 (39%), Gaps = 13/364 (3%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELM 138
M++ G+ T + +LD + K + + A + + + N TY ++N Y K
Sbjct: 233 MQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTZTYXLMINVYGKANQ 292
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
+ + +MK + + + +L+ +A+ G EK + +EM+ + PD Y YN
Sbjct: 293 PMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNA 352
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
M A + GA + M+ G D +++ L + AGL ++AE A +EL+ +
Sbjct: 353 LMEAYSRAGLPQGASEIFSLMEHMG-CEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQ 411
Query: 259 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 318
+ ++ L++ + ++GN++ + L + + M+ L
Sbjct: 412 GMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDM 471
Query: 319 EKCFKEWESG----CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 374
E+ F E G D NV++ AY + G L+ E RG + TW
Sbjct: 472 ERLFAAMERGDGASAGAPDTSTYNVLVNAYGRAGYLDRMEAAFRSLAARGLAADVVTWTS 531
Query: 375 FSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 434
Y R + + E+ +D G P + T + + E+ V+ +
Sbjct: 532 RIGAYARKKEYGQCLRVFEEMVDAG------CYPDAGTAKVLLAACSDERQVEQVTAIVR 585
Query: 435 ILKK 438
+ K
Sbjct: 586 SMHK 589
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 133/326 (40%), Gaps = 24/326 (7%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY LL YC +AE ++ +M+ + ++ +N+ + K EK + Q M
Sbjct: 209 TYALLLRAYCGSGQLHRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRM 268
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
K ++ TY + + N + RV EMK G + T++ L + + GL
Sbjct: 269 KKERCRTNTZTYXLMINVYGKANQPMSSLRVFREMKSVG-CKPNICTYTALVNAFAREGL 327
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTG---NLSEVYRIWRSLRLAFPNTANIS 301
EKAE +E++ D+ AY L+ Y + G SE++ + + P+ A S
Sbjct: 328 CEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCE-PDRA--S 384
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y ++ AE F+E + ++ +++ A+A+ G + EE+ +
Sbjct: 385 YNILVDAFGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLH 444
Query: 362 RRGADPNAKTWEIFSDYYLRNG---DMKLAVDCLEKAIDTGRGDGGK-WVPSSETIRTFM 417
+ G P+ + Y R G DM+ +E RGDG P + T +
Sbjct: 445 KSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAME------RGDGASAGAPDTSTYNVLV 498
Query: 418 RHFEQEKDVDGAEGFLEILKKAVDDL 443
+ G G+L+ ++ A L
Sbjct: 499 NAY-------GRAGYLDRMEAAFRSL 517
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/263 (19%), Positives = 114/263 (43%), Gaps = 3/263 (1%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+ Y L++ Y ++ +AEA + E + + L+ Y +G + +I E
Sbjct: 173 ICYNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGSGQLHRAEGVISE 232
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ + I P + YN ++ L A V + MK++ R + T+ + ++Y +A
Sbjct: 233 MQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKE-RCRTNTZTYXLMINVYGKAN 291
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
+ R +E+++ ++ Y L+ + + G + ++ ++ A + ++
Sbjct: 292 QPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQA-GHEPDVYAY 350
Query: 304 NMIQVLVNLKDLP-GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
N + + LP GA + F E D N+++ A+ + G + AE + ++
Sbjct: 351 NALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQ 410
Query: 363 RGADPNAKTWEIFSDYYLRNGDM 385
+G P K+ + + R+G++
Sbjct: 411 QGMRPTMKSHMLLLSAHARSGNV 433
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/235 (19%), Positives = 86/235 (36%), Gaps = 36/235 (15%)
Query: 184 MKASSIMPDSYTYN-----------------------------------VWMRALAAVND 208
++ SS PD YN + +RA
Sbjct: 163 LRRSSFRPDIICYNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGSGQ 222
Query: 209 ISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQ 268
+ AE VI EM+R+G + T ++ ++A EKA + ++ + Y
Sbjct: 223 LHRAEGVISEMQRNG-IPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTZTYX 281
Query: 269 FLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESG 328
+I +YG+ R++R ++ +Y ++ AE+ F+E +
Sbjct: 282 LMINVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQA 341
Query: 329 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
D+ N ++ AY++ G + A E+ G +P+ ++ I D + R G
Sbjct: 342 GHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAG 396
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 143/317 (45%), Gaps = 10/317 (3%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TYGSL++ CKE E+A L +KM E+ L +++ +N+L+ Y G E+ + EM
Sbjct: 245 TYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEM 304
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
IMP TYN+ + AL + A+ +I+EM++ G + D T++ L + Y G
Sbjct: 305 VKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKG-IIPDAITYNILINGYSRCGN 363
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
++A E+ ++ Y LI + + + E ++ + + I +
Sbjct: 364 AKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNA 423
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
MI ++ A KE + D N ++ +EG++E A L + + RG
Sbjct: 424 MIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRG 483
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 424
P+ ++ Y R GD+K A ++ + G + P+ T ++ + +
Sbjct: 484 IKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIG------FNPTLLTYNALIKCLCKNQ 537
Query: 425 DVDGAEGFLEILKKAVD 441
+ D AE E+LK+ V+
Sbjct: 538 EGDLAE---ELLKEMVN 551
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 113/267 (42%), Gaps = 1/267 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N ++Y ++++ Y E A +L+ M+ + S + SL++ K G E+ +
Sbjct: 207 NVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLF 266
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+M ++P++ TYN + D+ A +EM + G + +T++ L
Sbjct: 267 DKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG-IMPSVSTYNLLVHALFM 325
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G +A+ +KE+ + D Y LI Y + GN + + + +++
Sbjct: 326 EGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVT 385
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y ++I VL + A+ F++ + D+ + N MI + G +E A L +
Sbjct: 386 YTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMD 445
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLA 388
R+ P+ T+ R G ++ A
Sbjct: 446 RKSVPPDEVTFNTLMQGRCREGKVEEA 472
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 128/303 (42%), Gaps = 17/303 (5%)
Query: 140 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 199
+KA + M+ L + + +N+++ Y+ G+ E I+ M+ I PDSYTY
Sbjct: 190 KKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSL 249
Query: 200 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 259
+ + + A + ++M G V + T++ L Y G E+A E+ +
Sbjct: 250 ISGMCKEGRLEEASGLFDKMVEIGLV-PNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG 308
Query: 260 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 319
+S Y L+ G + E + + +R I+Y +L+N G
Sbjct: 309 IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITY----NILINGYSRCGNA 364
Query: 320 KCFKEWESGCATYDIRVTNV----MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 375
K + + + I T+V +I ++ R++ A++L E+ +G P+ +
Sbjct: 365 KRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAM 424
Query: 376 SDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSE-TIRTFMRHFEQEKDVDGAEGFLE 434
D + NG+++ A L K +D K VP E T T M+ +E V+ A L+
Sbjct: 425 IDGHCANGNVERAF-MLLKEMDR------KSVPPDEVTFNTLMQGRCREGKVEEARMLLD 477
Query: 435 ILK 437
+K
Sbjct: 478 EMK 480
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 1/164 (0%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
S + + + ++++ +C E+A LL++M ++ + FN+LM + G E+
Sbjct: 414 VSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEAR 473
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
++ EMK I PD +YN + DI A V +EM G T++ L
Sbjct: 474 MLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIG-FNPTLLTYNALIKC 532
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 282
+ + AE LKE+ N+ D S Y LI G L E
Sbjct: 533 LCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 576
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 93/195 (47%), Gaps = 5/195 (2%)
Query: 123 HLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQ 182
H+TY SL+ + ++A+ L EK+ + + + FN+++ + G+ E+ +++
Sbjct: 383 HVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLK 442
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
EM S+ PD T+N M+ + A +++EMK G + D +++ L S Y
Sbjct: 443 EMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRG-IKPDHISYNTLISGYGRR 501
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLY--GQTGNLSEVYRIWRSLRLAFPNTANI 300
G + A E+ + + L Y LI Q G+L+E + + + + +
Sbjct: 502 GDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAE--ELLKEMVNKGISPDDS 559
Query: 301 SYLNMIQVLVNLKDL 315
+YL++I+ + N+ L
Sbjct: 560 TYLSLIEGMGNVDTL 574
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 134/308 (43%), Gaps = 10/308 (3%)
Query: 157 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
+S+ FN+L+ ++K G P +++ M A I P+ +YN + L + AE ++
Sbjct: 9 NSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEELV 68
Query: 217 EEM-KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYG 275
+M R GR D T+S L S Y +AG E++ LKE+ +R D Y ++
Sbjct: 69 RDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLC 128
Query: 276 QTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 335
++ L E + + A I++ +I K+L A+ ++ + D+
Sbjct: 129 KSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVV 188
Query: 336 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 395
N ++ K GRL+ AE+L ER + G P+ + F ++G + A LE+
Sbjct: 189 TYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQM 248
Query: 396 IDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEV--FEPLIR 453
D+ P+ T T + + +D A +E + + D G+ V + ++
Sbjct: 249 RDS------HHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASS-DGCGLNVVGYSTVVD 301
Query: 454 TYAAAGRT 461
GRT
Sbjct: 302 GLCKLGRT 309
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 114/266 (42%), Gaps = 7/266 (2%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +L++ CK ++AE LLE+MK + ++S + K+G ++++
Sbjct: 188 VTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQ 247
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ S P+ TYN + L I A ++E+M + +S + + G
Sbjct: 248 MRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLG 307
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
++A ++ + D+ Y L+ + G + E R + + ++Y
Sbjct: 308 RTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYC 367
Query: 304 NMIQVLVNLKDLPGAEKCFKEW------ESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
+++ L + L AE+ +E C + N +IG K GR+++A +
Sbjct: 368 SLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPP-SVSTYNALIGGLCKAGRIDDALKFF 426
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNG 383
+R R +G DP+ ++ + R+G
Sbjct: 427 QRMRSQGCDPDGVSYSTIVEGLARSG 452
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/321 (20%), Positives = 144/321 (44%), Gaps = 8/321 (2%)
Query: 76 KLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL----PETSKNHLTYGSLLN 131
+L E M R + V L+ + K++ AE D+ ++ + +TY +LL+
Sbjct: 31 RLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDMVTYSTLLS 90
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
YCK E++ LL+++ L ++ + ++ K+ + +++EM + P
Sbjct: 91 GYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCP 150
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
T+N + ++ A+ ++++M G V AD T++ L +AG ++AE+
Sbjct: 151 TLITFNTLISGCCREKNLEMADSLLQKMAASG-VKADVVTYNTLMDGLCKAGRLQEAEQL 209
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
L+ ++ D+ AY + ++G + + +++ +R + + ++Y ++ L
Sbjct: 210 LERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCK 269
Query: 312 LKDLPGAEKCFKEWES--GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
+ A + ++ S GC + + V+ G K GR + A + E R G P+
Sbjct: 270 SGKIDTALEMMEQMASSDGCGLNVVGYSTVVDG-LCKLGRTQEARSVMEAMARAGCRPDV 328
Query: 370 KTWEIFSDYYLRNGDMKLAVD 390
T+ + + G ++ AV+
Sbjct: 329 VTYSSLVNGLCKAGKIEEAVE 349
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 92/217 (42%), Gaps = 6/217 (2%)
Query: 159 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 218
+ FN+L++ + + E +++Q+M AS + D TYN M L + AE+++E
Sbjct: 153 ITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLER 212
Query: 219 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYG--Q 276
MK G A D +S+ ++G A + L+++ R++H D + + L G +
Sbjct: 213 MKASG-CAPDVVAYSSFVYGLCKSGKVLDAHQVLEQM--RDSHHDPNVVTYNTILDGLCK 269
Query: 277 TGNLSEVYRIWRSLRLAFPNTAN-ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 335
+G + + + + N + Y ++ L L A + D+
Sbjct: 270 SGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVV 329
Query: 336 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
+ ++ K G++E A E G PNA T+
Sbjct: 330 TYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTY 366
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 135/317 (42%), Gaps = 3/317 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
A K+ E+ K G V I ++ + K +D Y ++ E + +TY +L+N
Sbjct: 208 AWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVN 267
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
YC+ + +A L++ M L +N+L+ K G E+ ++ EM + P
Sbjct: 268 AYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCP 327
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
++ T+N + D+ AERV EM + G V D +FS++ ++ G +A
Sbjct: 328 NAATFNPMLVESCRKEDVWEAERVFNEMLQRG-VVPDLISFSSIVGVFSRNGELGRALAY 386
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
++++ D Y LI Y + ++S ++ + ++Y ++ L
Sbjct: 387 FEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCR 446
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
K L A++ FKE D +I Y K+G + A L E R P+ T
Sbjct: 447 GKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVT 506
Query: 372 WEIFSDYYLRNGDMKLA 388
+ D + + G+M+ A
Sbjct: 507 YNTLMDGFCKVGEMEKA 523
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 116/263 (44%), Gaps = 1/263 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +LLN C+ M + A+ L ++M E + +L+ Y K G+ K ++ +
Sbjct: 435 VTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFET 494
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M S+ PD TYN M V ++ A+ + +M + + +FS L + + G
Sbjct: 495 MTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISR-EIFPSYISFSILINGFCSLG 553
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
L +A R E++ + L +I Y + GNLS+ ++ I+Y
Sbjct: 554 LVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYN 613
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I V ++ A E ++ N ++G +++ GR++ AE + + +
Sbjct: 614 TLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDK 673
Query: 364 GADPNAKTWEIFSDYYLRNGDMK 386
G +P+ T+ + Y+ +MK
Sbjct: 674 GINPDKSTYTSLINGYVSKDNMK 696
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 141/337 (41%), Gaps = 17/337 (5%)
Query: 69 KLYYPALKLSENME------KRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK- 121
+ Y A KL E E KRG +++ L + KV +D A + D ++
Sbjct: 162 RTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSGNI 221
Query: 122 -NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
N T ++N CK+ + L +M+E + + +N+L+ Y + G + +
Sbjct: 222 VNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGL 281
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
+ M + P +TYN + L A+RV++EM G + + TF+ + V
Sbjct: 282 VDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVG-LCPNAATFN---PMLV 337
Query: 241 EAGLFE---KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
E+ E +AER E+ R DL ++ ++ ++ + G L + ++
Sbjct: 338 ESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVP 397
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
+ Y +I D+ GA K E E GC D+ N ++ + L++A+EL
Sbjct: 398 DTVIYTILINGYCRNDDVSGALKMRNEMVERGCVM-DVVTYNTLLNGLCRGKMLDDADEL 456
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
+ RG P+ T Y ++G+M A+ E
Sbjct: 457 FKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFE 493
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 116/282 (41%), Gaps = 12/282 (4%)
Query: 162 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 221
N+L+ K G + + ++ S + + YT N+ + AL + + EM+
Sbjct: 193 NALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEE 252
Query: 222 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 281
G V AD T++ L + Y GL +A + + + L Y LI + G+
Sbjct: 253 KG-VYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYE 311
Query: 282 EVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
R+ + PN A ++ M+ +D+ AE+ F E D+ +
Sbjct: 312 RAKRVLDEMLGVGLCPNAA--TFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSS 369
Query: 340 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
++G +++ G L A E+ + G P+ + I + Y RN D+ A+ + ++ G
Sbjct: 370 IVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERG 429
Query: 400 RGDGGKWVPSSETIRTFMRHFEQEKDVDGA-EGFLEILKKAV 440
V T T + + K +D A E F E++++ V
Sbjct: 430 ------CVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGV 465
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 76/157 (48%), Gaps = 2/157 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A +L + M+++G+ T+ + + + A ++ + + +TY +L+N
Sbjct: 558 AFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLIN 617
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ KE ++A L+ M+E L + + +N+++ +++ G ++ ++ +M I P
Sbjct: 618 SFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINP 677
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAAD 228
D TY + + +++ A RV +EM + G V D
Sbjct: 678 DKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPDD 714
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 130/304 (42%), Gaps = 36/304 (11%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +T+ ++N CK +KA ++E MK S + +N+++ Y K G K A++
Sbjct: 228 NVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALL 287
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG------------------ 223
+EM A I P+ T+N+ + +++ A++V EEM+R G
Sbjct: 288 KEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSN 347
Query: 224 ----------------RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAY 267
+ + T++ L + + + + ++A L ++ R ++ +
Sbjct: 348 GKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITF 407
Query: 268 QFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQV-LVNLKDLPGAEKCFKEWE 326
LI YG+ G + + + + RS+ L N+S N + V ++ A K KE E
Sbjct: 408 NTLIDAYGKAGRMDDAF-LLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEME 466
Query: 327 SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 386
D+ N+++ A K+G A L + G +P+ T+ D Y R G+
Sbjct: 467 GNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNST 526
Query: 387 LAVD 390
A++
Sbjct: 527 AALN 530
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 110/262 (41%), Gaps = 36/262 (13%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY +L+N +CK+ M ++A +L+ + + L + + FN+L+ Y K G + +
Sbjct: 368 NVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLR 427
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M + + P+ TYN + ++ A ++ +EM+ +G + AD T++ L +
Sbjct: 428 SMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNG-LKADLVTYNILVDALCK 486
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G KA R L E+ + Y LI Y + GN + + R+L ANI
Sbjct: 487 KGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNV-RTLMEKKGRRANI- 544
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
TY NV+I + +G+LE A L
Sbjct: 545 ----------------------------VTY-----NVLIKGFCNKGKLEEANRLLNEML 571
Query: 362 RRGADPNAKTWEIFSDYYLRNG 383
+G PN T++I D + G
Sbjct: 572 EKGLIPNRTTYDILRDEMMEKG 593
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 114/271 (42%), Gaps = 7/271 (2%)
Query: 156 FSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERV 215
S++ N ++ K G + ++ +EM I + T++V + L V A V
Sbjct: 192 LSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDV 251
Query: 216 IEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYG 275
+E+MK G + T++ + Y +AG KA+ LKE+ + H + + LI +
Sbjct: 252 VEDMKAWG-FSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFC 310
Query: 276 QTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 335
+ N++ +++ ++ ++Y ++I L + L A + ++
Sbjct: 311 RDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVV 370
Query: 336 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 395
N +I + K+ L+ A E+ + +RG PN T+ D Y + G M A
Sbjct: 371 TYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMM 430
Query: 396 IDTGRGDGGKWVPSSETIRTFMRHFEQEKDV 426
+DTG P+ T + F +E +V
Sbjct: 431 LDTG------VCPNVSTYNCLIVGFCREGNV 455
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 116/286 (40%), Gaps = 6/286 (2%)
Query: 103 VQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFN 162
++G D A +Y L S N +L KE E++ ++M +G + + F+
Sbjct: 179 LEGFDRAGDYGFRLSALSCN-----PMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFD 233
Query: 163 SLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRD 222
++ K G +K ++++MKA P TYN + + A+ +++EM
Sbjct: 234 VVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAK 293
Query: 223 GRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 282
R+ + TF+ L + A++ +E++ + ++ Y LI G L E
Sbjct: 294 -RIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDE 352
Query: 283 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 342
+ + ++Y +I K L A + + ++ N +I
Sbjct: 353 ALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLID 412
Query: 343 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 388
AY K GR+++A L+ G PN T+ + R G++K A
Sbjct: 413 AYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEA 458
>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Glycine max]
Length = 1078
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 94/420 (22%), Positives = 170/420 (40%), Gaps = 52/420 (12%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL------PETSKNHLTYGSLLNCYC 134
M RG+N +V + L + K Q +D ++F + P+ + T+ LLN C
Sbjct: 131 MGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAKGICPDVA----TFNILLNALC 186
Query: 135 KELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSY 194
+ + A LL KM+E + +++ +N+L+ Y K G + +I M + I D
Sbjct: 187 ERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVC 246
Query: 195 TYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE 254
TYNV++ L + + +++ M+R+ V + T++ L S +V G E A + E
Sbjct: 247 TYNVFIDNLCRDSRSAKGYLLLKRMRRN-MVYPNEITYNTLISGFVREGKIEVATKVFDE 305
Query: 255 LENRNAHRDLSAYQFLITLYGQTGNLSEVYR----------------------------- 285
+ N + Y LI + TGN+ E R
Sbjct: 306 MSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAE 365
Query: 286 ------IWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
I +R+ ++ISY MI L L A + + D+ +V
Sbjct: 366 FGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSV 425
Query: 340 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+I + + G++ NA+E+ + + G PN + Y + G +K A++ A+
Sbjct: 426 LINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALN--AYAVMNH 483
Query: 400 RGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
G + + TF R+ + E+ AE F+ + + D F+ +I Y +G
Sbjct: 484 SGHVADHFTCNVLVATFCRYGKLEE----AEYFMNHMSRMGLDPNSVTFDCIINGYGNSG 539
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/344 (20%), Positives = 141/344 (40%), Gaps = 13/344 (3%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY +L++ + +E E A + ++M NL +S+ +N+L+ + TG+ + ++
Sbjct: 279 NEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLM 338
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M + + P+ TY + L + ++E M R G V +++ + +
Sbjct: 339 DVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERM-RMGGVRVSHISYTAMIDGLCK 397
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G+ E+A + L ++ + + D+ + LI + + G ++ I + I
Sbjct: 398 NGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGIL 457
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I + L A + D NV++ + + G+LE AE
Sbjct: 458 YSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMS 517
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
R G DPN+ T++ + Y +GD A +K G PS T ++
Sbjct: 518 RMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGH------FPSLFTYGGLLKGLC 571
Query: 422 QEKDVDGAEGF---LEILKKAVDDLGVEVFEPLIRTYAAAGRTS 462
++ A F L + AVD++ +F + + +G S
Sbjct: 572 IGGHINEALKFFHRLRCIPNAVDNV---IFNTKLTSTCRSGNLS 612
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 103/269 (38%), Gaps = 35/269 (13%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
TYG LL C +A +++ + ++ FN+ +T ++G+ A+I E
Sbjct: 561 FTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINE 620
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + +PD++TY + L I A + + G ++ + +++L ++ G
Sbjct: 621 MVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHG 680
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
A +E+ N++ D A+ +I Y + G S+V I +++
Sbjct: 681 HARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMK------------ 728
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
CF ATY N+++ YAK + L + R
Sbjct: 729 -------------SKNLCFN-----LATY-----NILLHGYAKRHAMARCFMLYKDMIRH 765
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCL 392
G P+ +W Y ++ +A+ L
Sbjct: 766 GFLPDKFSWHSLILGYCQSKSFDVAIKIL 794
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 112/295 (37%), Gaps = 29/295 (9%)
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+ + M A I PD T+N+ + AL A ++ +M+ G V T++ L +
Sbjct: 161 SFFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESG-VYPTAVTYNTLLNW 219
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR--LAFPN 296
Y + G ++ A + + + ++ D+ Y I + ++ Y + + +R + +PN
Sbjct: 220 YCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPN 279
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
I+Y +I V + A K F E + N +I + G + A L
Sbjct: 280 --EITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRL 337
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTF 416
+ G PN T+ + +N + + LE+ R G +
Sbjct: 338 MDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERM----RMGGVR----------- 382
Query: 417 MRHFEQEKDVDGA--EGFLEILKKAVDDL-------GVEVFEPLIRTYAAAGRTS 462
+ H +DG G LE + +DD+ V F LI + G+ +
Sbjct: 383 VSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKIN 437
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/343 (18%), Positives = 142/343 (41%), Gaps = 13/343 (3%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S N Y SL++ K A + E+M ++ ++ FN ++ Y++ G K+
Sbjct: 663 SPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVND 722
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I+ MK+ ++ + TYN+ + A + ++ + ++M R G + D ++ +L Y
Sbjct: 723 ILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFL-PDKFSWHSLILGY 781
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR--LAFPNT 297
++ F+ A + L+ + D + LIT + + + + + + + + + PN
Sbjct: 782 CQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNV 841
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKE-WESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
+Y + L+ D A + + ESG + + +I + G ++ A +L
Sbjct: 842 D--TYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYI-TLINGMCRVGNIKGAMKL 898
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTF 416
++ + G + + ++ A+ L+ ++ + +P+ T T
Sbjct: 899 QDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEM------QIIPTVATFTTL 952
Query: 417 MRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
M + +E +V A I++ L V + LI A G
Sbjct: 953 MHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANG 995
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 59/311 (18%), Positives = 119/311 (38%), Gaps = 12/311 (3%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+H T L+ +C+ E+AE + M + L +S+ F+ ++ Y +G K ++
Sbjct: 489 DHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVF 548
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+M + P +TY ++ L I+ A + ++ A D F+ +
Sbjct: 549 DKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPN-AVDNVIFNTKLTSTCR 607
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI-WRSLR--LAFPNTA 298
+G A + E+ + D Y LI + G + + +++ L PN A
Sbjct: 608 SGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPA 667
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
Y +++ L+ A F+E + D NV+I Y+++G+ ++
Sbjct: 668 --VYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILS 725
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 418
+ + N T+ I Y + M + I G ++P + + +
Sbjct: 726 TMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHG------FLPDKFSWHSLIL 779
Query: 419 HFEQEKDVDGA 429
+ Q K D A
Sbjct: 780 GYCQSKSFDVA 790
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 61/313 (19%), Positives = 117/313 (37%), Gaps = 4/313 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
A++L ++M K +N V ++ ++ +V I+ A+ + +T N + Y +L+
Sbjct: 404 AVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIY 463
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
YCK ++A M N L+ + + G E+ + M + P
Sbjct: 464 NYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDP 523
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+S T++ + D A V ++M G + +T + L G +A +
Sbjct: 524 NSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFT-YGGLLKGLCIGGHINEALKF 582
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
L D + +T ++GNLS+ + + N +Y N+I L
Sbjct: 583 FHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCK 642
Query: 312 LKDLPGAEKCF-KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
+ A K E G + + V ++ K G A + E + +P+
Sbjct: 643 KGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTV 702
Query: 371 TWEIFSDYYLRNG 383
+ + D Y R G
Sbjct: 703 AFNVIIDQYSRKG 715
Score = 41.6 bits (96), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 86/211 (40%), Gaps = 36/211 (17%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
T+ L+ +C+ +KA L+++M + + + +N+L +T K ++Q
Sbjct: 807 FTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQV 866
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG----RVA------------- 226
+ S +P + Y + + V +I GA ++ +EMK G VA
Sbjct: 867 LLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKK 926
Query: 227 ---ADWT--------------TFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQF 269
A W TF+ L +Y + KA +E+ + D+ AY
Sbjct: 927 IENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNV 986
Query: 270 LITLYGQTGNLSEVYRIWRSL--RLAFPNTA 298
LI+ G++ ++++ + R +PNT+
Sbjct: 987 LISGLCANGDIEAAFKLYEEMKQRDLWPNTS 1017
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 59/124 (47%), Gaps = 3/124 (2%)
Query: 140 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 199
E A +L+ M E+ + + F +LM +Y K + K + M+ + D YNV
Sbjct: 928 ENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVL 987
Query: 200 MRALAAVNDISGAERVIEEMK-RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
+ L A DI A ++ EEMK RD + + + + L + ++E+ L+++++R
Sbjct: 988 ISGLCANGDIEAAFKLYEEMKQRD--LWPNTSIYIVLIDSFCAGNYQIESEKLLRDIQDR 1045
Query: 259 NAHR 262
R
Sbjct: 1046 ELMR 1049
>gi|302801852|ref|XP_002982682.1| hypothetical protein SELMODRAFT_421991 [Selaginella moellendorffii]
gi|300149781|gb|EFJ16435.1| hypothetical protein SELMODRAFT_421991 [Selaginella moellendorffii]
Length = 414
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 152/368 (41%), Gaps = 38/368 (10%)
Query: 91 SDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMK 150
SD + L+LV ++ A ++ ++P ++ Y ++L + + AE + +MK
Sbjct: 40 SDHVLLLELVGRISKFQATRCFW-EMPAELRSEAAYTAMLQVFARWHAIPAAEDTMSEMK 98
Query: 151 ELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDIS 210
LNL P+N ++ +Y + +K+ A+ E+ + + PD++TY + +RA +
Sbjct: 99 SLNLITRVEPYNIMLDMYKRKNEDDKVRAMYDELSSLGVAPDAHTYLIVLRAKQKIGGFD 158
Query: 211 GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 270
G E A+ F + E + + L Y+ +
Sbjct: 159 GIE-------------AEVRKFLD---------------------EQLTSRQPLFIYECM 184
Query: 271 ITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCA 330
+ +Y +L+ + + L F ++ SY ++ L ++ AE+ F E +
Sbjct: 185 LRIYTLLRDLTAIENLRSILLKTFKKFSSSSYNCLLDAYRQLGEVERAERLFNEIGNKF- 243
Query: 331 TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
T +I+ MI YA GR+E A EL ++ R G + + + Y+ D A+
Sbjct: 244 TLNIQSYRAMIAVYASNGRMEKANELYKQLFRAGFECHPAIYHAMVAGYIDARDHSNALI 303
Query: 391 CLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEP 450
KA D R G P T +R ++ D AE + LK+ VEV+
Sbjct: 304 QYGKAWD--RSLLGHPKPLRATTLLVLRVLAEQGDFSRAESIVRDLKRERQGSDVEVYNW 361
Query: 451 LIRTYAAA 458
L++ Y A
Sbjct: 362 LLKAYIKA 369
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/399 (21%), Positives = 159/399 (39%), Gaps = 43/399 (10%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
+ + T+ +L+ + +E E A + +M E+ + + N L+ Y K G E
Sbjct: 212 VAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDAL 271
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGR-------------- 224
IQ+ A PD TYN ++ L + + A +V++ M ++G
Sbjct: 272 GYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCL 331
Query: 225 --------------------VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 264
D TTF+ L + E+A +++ + D+
Sbjct: 332 CKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDV 391
Query: 265 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 324
+ LI + G+ R++ ++ + ++Y +I L +L L A K+
Sbjct: 392 YTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKD 451
Query: 325 WES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
ES GC I N +I K+ R+E AEE+ ++ +G NA T+ D ++
Sbjct: 452 MESTGCPRSTI-TYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDK 510
Query: 384 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDL 443
+ A + + I G P++ T + + H+ ++ D+ A LE + ++
Sbjct: 511 KIDDAFGLINQMISEG------LQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEV 564
Query: 444 GVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKK 482
V + LI AGRT V L+ L+ +++ + K
Sbjct: 565 DVVTYGTLINGLCKAGRTQ-VALKVLRGMRIKGMRPTPK 602
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 123/310 (39%), Gaps = 40/310 (12%)
Query: 128 SLLNCY-CKELMTEKAEALLEKMKEL-NLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
S L+ Y ++L + + +L +++ L + ++ +N L+ + + + + ++ EM
Sbjct: 114 SFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMG 173
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
A I PD T+N M+AL + + A ++EEM G VA D TTF+ L +VE G
Sbjct: 174 ARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRG-VAPDETTFTTLMQGFVEEGSI 232
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNL--------SEVYRIWRSLRLAFPNT 297
E A R + LI Y + G + E+ + ++ +
Sbjct: 233 EAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTF 292
Query: 298 AN---------------------------ISYLNMIQVLVNLKDLPGAEKCFKEW-ESGC 329
N +Y ++ L L A+ + + GC
Sbjct: 293 VNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGC 352
Query: 330 ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 389
DI N +I A RLE A +L + +G P+ T+ I + + GD LA+
Sbjct: 353 LP-DITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLAL 411
Query: 390 DCLEKAIDTG 399
E+ ++G
Sbjct: 412 RLFEEMKNSG 421
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 2/152 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
AL L ++ME G ++ +D + K I+ AE F +DL S+N +T+ +L++
Sbjct: 445 ALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLID 504
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK+ + A L+ +M L +++ +NS++T Y K G +K I++ M A+
Sbjct: 505 GLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEV 564
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
D TY + L A +V+ M+ G
Sbjct: 565 DVVTYGTLINGLCKAGRTQVALKVLRGMRIKG 596
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N++TY S+L YCK+ +KA +LE M + + +L+ K G + ++
Sbjct: 530 NNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVL 589
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
+ M+ + P YN +++L N+I A + EM G
Sbjct: 590 RGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 631
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 107/273 (39%), Gaps = 11/273 (4%)
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA-E 249
P Y +R L AV + + ++ EM+R+G S L S Y LF+ A +
Sbjct: 72 PGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDS-YEGQQLFDDAVD 130
Query: 250 RALKELENR-NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQV 308
L +L+ D Y L+ + + + + ++ + +++ +++
Sbjct: 131 LILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKA 190
Query: 309 LVNLKDLPGAEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
L + A +E S G A + T +M G + +EG +E A +K R G
Sbjct: 191 LCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQG-FVEEGSIEAALRVKARMLEMGCSA 249
Query: 368 NAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVD 427
T + + Y + G ++ A+ +++ I G + P T TF+ Q V
Sbjct: 250 TKVTVNVLINGYCKLGRVEDALGYIQQEIADG------FEPDQITYNTFVNGLCQNDHVG 303
Query: 428 GAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 460
A ++++ + D V + ++ G+
Sbjct: 304 HALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQ 336
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 139/335 (41%), Gaps = 40/335 (11%)
Query: 140 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 199
E+A LL +M+E+ F +L+ A+ G A++ E+K S + PD YNV
Sbjct: 62 ERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVC 121
Query: 200 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 259
+ ++ A + E+K G + D +++++ + +AG +AE ++E
Sbjct: 122 IDCFGKAGNVDMACKFFHELKAQG-LKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAER 180
Query: 260 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 319
+ AY +I YG G + Y++ LR + +S+ +++ L + + A
Sbjct: 181 SVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEAL 240
Query: 320 KCF----KEWESGCATYDIRV------------------------------TNVMIGAYA 345
F K+ E +TY+I + N+M+
Sbjct: 241 SLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLC 300
Query: 346 KEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGK 405
K +LE A ++ E A +RG +P+ T+ D + G + A EK +D G
Sbjct: 301 KARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGH--NAN 358
Query: 406 WVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 440
V + IR F H +E DG + F E++++
Sbjct: 359 PVVYTSLIRNFFIHGRKE---DGHKVFKELIRRGC 390
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/324 (20%), Positives = 139/324 (42%), Gaps = 7/324 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNH--LTYGSLLN 131
A ++ + ME + + I +D + K + ++ A F + N +TY SL++
Sbjct: 273 AYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLID 332
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMP--FNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
K+ ++A L EKM L+ G ++ P + SL+ + G E + +E+
Sbjct: 333 GLGKKGQVDEAYRLFEKM--LDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGC 390
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
PD N +M + ++ + E+++ G + D ++S L +AG +
Sbjct: 391 KPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLP-DVRSYSILIHGLTKAGQARETS 449
Query: 250 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 309
++ + D AY ++ + ++G + + Y I ++ +Y ++ L
Sbjct: 450 NIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGL 509
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
+ L A F+E +S ++ + + +I + K GR++ A + E ++G PN
Sbjct: 510 AKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNV 569
Query: 370 KTWEIFSDYYLRNGDMKLAVDCLE 393
TW D ++ ++ A+ C +
Sbjct: 570 YTWNSLLDALVKAEEINEALVCFQ 593
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 75/182 (41%), Gaps = 1/182 (0%)
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
P Y V + ALA A ++ +M+ G F+ L G A
Sbjct: 43 PAFSAYTVLIGALAEARRPERALELLRQMQEVG-YEVGVHLFTTLVRALAREGQVADALA 101
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
+ E++ D+ Y I +G+ GN+ + + L+ ++SY +MI VL
Sbjct: 102 LVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLC 161
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
L AE+ F + E+ + N MI Y GR E+A +L ER R RG P+
Sbjct: 162 KAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVV 221
Query: 371 TW 372
++
Sbjct: 222 SF 223
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 120/306 (39%), Gaps = 4/306 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF-VDLPETSKNHLTYGSLLNC 132
A KL E + +RG +V L + K + +D A + F V + N TY +++
Sbjct: 204 AYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDM 263
Query: 133 YCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPD 192
C E+A +L++M+ +L + + N ++ K E+ I + PD
Sbjct: 264 LCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPD 323
Query: 193 SYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERAL 252
TY + L + A R+ E+M G A+ +++L + G E +
Sbjct: 324 CVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGH-NANPVVYTSLIRNFFIHGRKEDGHKVF 382
Query: 253 KELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI-SYLNMIQVLVN 311
KEL R DL+ + + G + + I+ +R ++ ++ SY +I L
Sbjct: 383 KELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIR-SYGFLPDVRSYSILIHGLTK 441
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
F + D R N ++ + K G++ A E+ E + + P T
Sbjct: 442 AGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVAT 501
Query: 372 WEIFSD 377
+ D
Sbjct: 502 YGAIVD 507
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 88/181 (48%), Gaps = 3/181 (1%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TYG++++ K ++A L E+ K + + + ++SL+ + K G ++ I++EM
Sbjct: 501 TYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEM 560
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ P+ YT+N + AL +I+ A + MK + + + T+S L +
Sbjct: 561 MKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMK-EMKCPPNTYTYSILINGLCRVQK 619
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTANISY 302
+ KA ++++ + ++ Y +I+ + GN+++ Y ++ + P+ A+ +
Sbjct: 620 YNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNA 679
Query: 303 L 303
L
Sbjct: 680 L 680
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 94/216 (43%), Gaps = 3/216 (1%)
Query: 72 YPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSL 129
+ A ++ E M+++ + TV+ +D +AK+ +D A F + N + Y SL
Sbjct: 481 HKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSL 540
Query: 130 LNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
++ + K ++A +LE+M + L + +NSL+ K + Q MK
Sbjct: 541 IDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKC 600
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
P++YTY++ + L V + A ++M++ G V + T++ + S + G A
Sbjct: 601 PPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLV-PNVVTYTTMISGLAKVGNITDAY 659
Query: 250 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 285
+ + D +++ LI E Y+
Sbjct: 660 SLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQ 695
>gi|255661198|gb|ACU25768.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 426
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 125/285 (43%), Gaps = 11/285 (3%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 6 SPDRYTYSTLITYFGKEGLFDDALSWLQKMEQDRVRGDLVLYSNLIELSRKLCDYSKAIS 65
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S IMPD YN + A +I EM+ G V D +++ L ++Y
Sbjct: 66 IFSRLKRSGIMPDLVVYNSMINVFGKAKLFREARSLISEMRTAG-VMPDTVSYTALLTMY 124
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ S+R
Sbjct: 125 VENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGIEPNV 184
Query: 300 ISYLNMIQVLVNLKDLPGAEKCF-----KEWESGCATYDIRVTNVMIGAYAKEGRLENAE 354
+SY +++V + + A F K+ E TY N M+ Y K E A
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTY-----NSMMMIYGKTLEHEKAN 239
Query: 355 ELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
L + + RG +PNA T+ + + G + A EK +G
Sbjct: 240 NLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAILFEKLRSSG 284
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/174 (20%), Positives = 87/174 (50%), Gaps = 5/174 (2%)
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
+ +N +TY S++ Y K L EKA L+++M+ + +++ ++++++++ K G ++
Sbjct: 214 DIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRA 273
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
+ +++++S I D Y + A +S A+R++ E+K + D
Sbjct: 274 AILFEKLRSSGIEIDQVLYQTMIVAYERAGLVSHAKRLLHELKTPDNIPRDTAI-----H 328
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 291
I AG E+A ++ + +D++ ++ +I L+ + S + ++ +R
Sbjct: 329 ILARAGRIEEATWVFRQAIDAGEVKDITVFERMIDLFSKYKKYSNIVEVFDKMR 382
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 83/200 (41%), Gaps = 4/200 (2%)
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
++ PD YTY+ + A +++M++D RV D +SNL + + + K
Sbjct: 4 ALSPDRYTYSTLITYFGKEGLFDDALSWLQKMEQD-RVRGDLVLYSNLIELSRKLCDYSK 62
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 307
A L+ DL Y +I ++G+ E + +R A +SY ++
Sbjct: 63 AISIFSRLKRSGIMPDLVVYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYTALLT 122
Query: 308 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
+ V K A F E D+ N+MI Y + G + A++L R+ G +P
Sbjct: 123 MYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGIEP 182
Query: 368 NAKTWEIFSDYYLRNGDMKL 387
N ++ Y GD +L
Sbjct: 183 NVVSYNTLLRVY---GDAEL 199
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/258 (19%), Positives = 112/258 (43%), Gaps = 1/258 (0%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y +L+ K KA ++ ++K + + +NS++ ++ K + ++I EM+
Sbjct: 47 YSNLIELSRKLCDYSKAISIFSRLKRSGIMPDLVVYNSMINVFGKAKLFREARSLISEMR 106
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
+ +MPD+ +Y + A V EM R+ + D TT + + +Y + G+
Sbjct: 107 TAGVMPDTVSYTALLTMYVENKKFLEALSVFAEM-REIKCLLDLTTCNIMIDVYGQLGMA 165
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
++A++ + ++ +Y L+ +YG E ++R ++ ++Y +M
Sbjct: 166 KEADKLFWSMRKLGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNSM 225
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
+ + + A +E +S + + +I + K G+L+ A L E+ R G
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAILFEKLRSSGI 285
Query: 366 DPNAKTWEIFSDYYLRNG 383
+ + ++ Y R G
Sbjct: 286 EIDQVLYQTMIVAYERAG 303
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 116/265 (43%), Gaps = 5/265 (1%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +L++ CK ++AE LLE+MK + ++S + K+G ++++
Sbjct: 188 VTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQ 247
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ S P+ TYN + L I A ++E+M + +S + + G
Sbjct: 248 MRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLG 307
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
++A ++ + D+ Y L+ + G + E R + + ++Y
Sbjct: 308 RTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYC 367
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYD-----IRVTNVMIGAYAKEGRLENAEELKE 358
+++ L + L AE+ +E SG D + N +IG K GR+++A + +
Sbjct: 368 SLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQ 427
Query: 359 RARRRGADPNAKTWEIFSDYYLRNG 383
R R +G DP+ ++ + R+G
Sbjct: 428 RMRSQGCDPDGVSYSTIVEGLARSG 452
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 133/308 (43%), Gaps = 10/308 (3%)
Query: 157 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
+S+ FN+L+ ++K G P +++ M A I P+ +YN + L + AE ++
Sbjct: 9 NSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELV 68
Query: 217 EEM-KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYG 275
+M R GR D T+S L S Y +AG E++ LKE+ +R D Y ++
Sbjct: 69 RDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLC 128
Query: 276 QTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 335
++ L E + + A I++ +I K+L A+ + + D+
Sbjct: 129 KSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVV 188
Query: 336 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 395
N ++ K GRL+ AE+L ER + G P+ + F ++G + A LE+
Sbjct: 189 TYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQM 248
Query: 396 IDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEV--FEPLIR 453
D+ P+ T T + + +D A +E + + D G+ V + ++
Sbjct: 249 RDSDHD------PNVVTYNTILDGLCKSGKIDTALEMMEQMASS-DGCGLNVVGYSTVVD 301
Query: 454 TYAAAGRT 461
GRT
Sbjct: 302 GLCKLGRT 309
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 143/321 (44%), Gaps = 8/321 (2%)
Query: 76 KLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL----PETSKNHLTYGSLLN 131
+L E M RG+ V L+ + K++ AE D+ ++ + +TY +LL+
Sbjct: 31 RLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDLVTYSTLLS 90
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
YCK E++ LL+++ L ++ + +M K+ + +++EM + P
Sbjct: 91 GYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCP 150
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
T+N + ++ A+ +++ M G V AD T++ L +AG ++AE+
Sbjct: 151 TLITFNTLISGCCREKNLEMADSLLQTMAASG-VKADVVTYNTLMDGLCKAGRLQEAEQL 209
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
L+ ++ D+ AY + ++G + +++ +R + + ++Y ++ L
Sbjct: 210 LERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCK 269
Query: 312 LKDLPGAEKCFKEWES--GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
+ A + ++ S GC + + V+ G K GR + A + E R G P+
Sbjct: 270 SGKIDTALEMMEQMASSDGCGLNVVGYSTVVDG-LCKLGRTQEARSVMEAMARAGCRPDV 328
Query: 370 KTWEIFSDYYLRNGDMKLAVD 390
T+ + + G ++ AV+
Sbjct: 329 VTYSSLVNGLCKAGKIEEAVE 349
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 129/276 (46%), Gaps = 1/276 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
TYG+L+N CK + +A+ALL++M L + + + +L+ + + G+ ++ +I+E
Sbjct: 293 FTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKE 352
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M A+ + P+ TY+ +R L + + A ++++M RD D T++ + +
Sbjct: 353 MVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSH-RPDTITYNLIIEGHFRHH 411
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
+ A R L E+EN ++ Y +I Q+G + + + Y
Sbjct: 412 SKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYA 471
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I ++ A + F + D+ N +I +K GR+E + + + + R
Sbjct: 472 PLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQER 531
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
G PN T+ YL+NGD++ A +++ +DTG
Sbjct: 532 GLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTG 567
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 147/322 (45%), Gaps = 14/322 (4%)
Query: 100 VAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFS 157
++KV ++ + YF + E N TY L++ Y K E AE L+++M + L +
Sbjct: 512 LSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPN 571
Query: 158 SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIE 217
+ + L+ Y K+ EK+ + + M +M D+ Y + + L++ ++ A RV+
Sbjct: 572 DVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLS 631
Query: 218 EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQT 277
++++G V D +S+L S + EKA L E+ + ++ Y LI ++
Sbjct: 632 GIEKNGSV-PDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKS 690
Query: 278 GNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 335
G++S ++ S+ + PN ++Y ++I + D+ A + E + T D
Sbjct: 691 GDISYARNVFNSILAKGLVPNC--VTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAF 748
Query: 336 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 395
V +V+ + G LE A L E RG + ++ D + + G M+ + L
Sbjct: 749 VYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLH-- 805
Query: 396 IDTGRGDGGKWVPSSETIRTFM 417
+ GRG VP++ TI +
Sbjct: 806 VIMGRG----LVPNALTIENII 823
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 118/269 (43%), Gaps = 1/269 (0%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
+GS L YCK + A+ +L +M+E G +++ +N L+ ++G E+ ++M+
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
++PD +TY + L + A+ +++EM + + ++NL ++ G
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSC-AELKPNVVVYANLIDGFMREGNA 343
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
++A + +KE+ + Y L+ + G + + + + I+Y +
Sbjct: 344 DEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLI 403
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
I+ A + E E+ + ++ ++MI + G E A +L E +G
Sbjct: 404 IEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGL 463
Query: 366 DPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
PNA + Y R G++ LA + +K
Sbjct: 464 KPNAFVYAPLISGYCREGNVSLACEIFDK 492
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 150/362 (41%), Gaps = 31/362 (8%)
Query: 38 SVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHL 97
+ + L+Q + R++ G + L A ++ +EK G +V D ++
Sbjct: 594 TFKSMLDQGVMLDNRIY----GILIHNLSSSGNMEAAFRVLSGIEKNG---SVPDVHVYS 646
Query: 98 DLVAKVQGIDAAENYFVDLPETSK-----NHLTYGSLLNCYCKELMTEKAEALLEKMKEL 152
L++ + E F L E SK N + Y +L++ CK A + +
Sbjct: 647 SLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAK 706
Query: 153 NLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA 212
L + + + SL+ K G + EM A+ I PD++ Y+V ++ D+ A
Sbjct: 707 GLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQA 766
Query: 213 ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLIT 272
+IEEM G A ++F+NL + + G ++ + L + R + + +I+
Sbjct: 767 MFLIEEMFLRGH--ASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIIS 824
Query: 273 LYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY 332
+ G LSEV+ I+ L+ +A + ++ ++N +P
Sbjct: 825 GLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIP---------------- 868
Query: 333 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 392
+ V + MI + KEG L+ A L++ + A ++ D R G + A++ L
Sbjct: 869 -LDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLL 927
Query: 393 EK 394
++
Sbjct: 928 KE 929
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 152/359 (42%), Gaps = 13/359 (3%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGF--SSMPFNSLMTLYAKTGHPEKI 177
S +T L+N YCK M +AL +E+ GF + +N+ + + GH
Sbjct: 264 SPTGVTVNVLINGYCK--MGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHA 321
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
++ M PD +TYN + L+ ++ A+ ++ +M G D TTF+ L
Sbjct: 322 LKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRG-CLPDTTTFNTLIV 380
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
E+A +EL + D+ + LI + G+ R++ ++ +
Sbjct: 381 ALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTP 440
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
++Y +I L ++ L A E ES N +I A K+ R+E AEE+
Sbjct: 441 DEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVF 500
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 417
++ +G +A T+ D + + A + +E+ + G P++ T + +
Sbjct: 501 DQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEG------LQPNNITYNSIL 554
Query: 418 RHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPV--MLRRLKMEKV 474
H+ ++ ++ A LE + ++ V + LI AGRT +LR ++++ +
Sbjct: 555 THYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGI 613
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 111/299 (37%), Gaps = 44/299 (14%)
Query: 158 SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIE 217
++ FN L+ + + + + ++ EM I PD T N ++AL + + A ++E
Sbjct: 162 TVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLE 221
Query: 218 EMKRDGRVAADWTTFSNLASIYVEAGLFEKA----------------------------- 248
EM G VA D TTF+ L ++E G E A
Sbjct: 222 EMSSHG-VAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKM 280
Query: 249 ---ERALKELENRNA---HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY 302
E AL ++ A D Y + Q G++S ++ + + +Y
Sbjct: 281 GRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTY 340
Query: 303 LNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
+I L +L A+ + + GC D N +I A + + RLE A +L
Sbjct: 341 NTVINCLSKNGELDEAKGIVNQMVDRGCLP-DTTTFNTLIVALSSQNRLEEALDLARELT 399
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 420
+G P+ T+ I + + GD L + E+ +G P T + H
Sbjct: 400 VKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSG------CTPDEVTYNILIDHL 452
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 81/170 (47%), Gaps = 1/170 (0%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
++ +TY ++++ CK++ E+AE + ++M + S++ FN+L+ K + +
Sbjct: 475 RSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATEL 534
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
I++M + P++ TYN + +I A ++E M +G D T+ L +
Sbjct: 535 IEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANG-FEIDVVTYGTLINGLC 593
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
+AG + A + L+ + + AY +I + NL + ++R +
Sbjct: 594 KAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREM 643
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 2/152 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
AL L ME G ++ +D + K I+ AE F +D S++ +T+ +L++
Sbjct: 461 ALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLID 520
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK + A L+E+M + L +++ +NS++T Y K G+ +K I++ M A+
Sbjct: 521 GLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEI 580
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
D TY + L A +++ M+ G
Sbjct: 581 DVVTYGTLINGLCKAGRTQVALKLLRGMRIKG 612
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 85/194 (43%), Gaps = 2/194 (1%)
Query: 79 ENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKE 136
+ M+ +G++++ +D + K + ID A + + N++TY S+L YCK+
Sbjct: 501 DQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQ 560
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 196
+KA +LE M + + +L+ K G + +++ M+ I P Y
Sbjct: 561 GNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAY 620
Query: 197 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 256
N +++L N++ A + EM G T S+ G ++A L E+
Sbjct: 621 NPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMV 680
Query: 257 NRNAHRDLSAYQFL 270
N+ + S+++ L
Sbjct: 681 NKGFMPEFSSFRML 694
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 55/289 (19%), Positives = 103/289 (35%), Gaps = 48/289 (16%)
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGR-------------------------- 224
P S Y ++ L E ++ EM+R+G
Sbjct: 87 PSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVESYARLRRFDDAVDL 146
Query: 225 -----------VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITL 273
V AD F++L ++ VE + E E+ R D+ LI
Sbjct: 147 VLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKA 206
Query: 274 YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC-FKEWESGCATY 332
+ + + + ++ ++Q + + A + K E+GC+
Sbjct: 207 LCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPT 266
Query: 333 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 392
+ V NV+I Y K GR+E+A ++ G +P+ T+ F +NG + A+ +
Sbjct: 267 GVTV-NVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVM 325
Query: 393 EKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVD 441
+ + G P T T + + ++D A+G I+ + VD
Sbjct: 326 DLMLQEGHD------PDVFTYNTVINCLSKNGELDEAKG---IVNQMVD 365
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 162/371 (43%), Gaps = 15/371 (4%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL L M++R + V + +D + + IDAA + F ++ + +TY SL+
Sbjct: 189 ALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVG 248
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK LL+ M + + + FN L+ ++ K G ++ + +EM I P
Sbjct: 249 GLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISP 308
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
++ TYN M N +S A +++ M R+ + D TF++L Y + ++ +
Sbjct: 309 NTITYNSLMDGYCMQNRLSEANNMLDLMVRN-NCSPDIVTFTSLIKGYCKVKRVDEGMKL 367
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNL---SEVYRIWRSLRLAFPNTANISYLNMIQV 308
+++ R + Y L+ + Q+G L E+++ SL + P+ ++Y ++
Sbjct: 368 FRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGV-LPDV--MTYGILLDG 424
Query: 309 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 368
L + L A + F++ + DI + ++I K G++E+A L +G PN
Sbjct: 425 LCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPN 484
Query: 369 AKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDG 428
T+ + + G + A L K + G P+ T T +R ++ D+
Sbjct: 485 VMTYTVMISGLCKKGSLSEANILLRKMEEDGNE------PNDCTYNTLIRAHLRDGDLTA 538
Query: 429 AEGFLEILKKA 439
+ +E +K
Sbjct: 539 SAKLIEEMKSC 549
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 123/275 (44%), Gaps = 7/275 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY S++N CK T A LL KM E N+ +++++ + G + ++
Sbjct: 169 NVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLF 228
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+EM+ I TYN + L + +++++M ++ + TF+ L ++V+
Sbjct: 229 KEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSR-KIIPNVITFNVLIDVFVK 287
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN-- 299
G ++A KE+ + + Y L+ Y LSE + L L N +
Sbjct: 288 EGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNM---LDLMVRNNCSPD 344
Query: 300 -ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+++ ++I+ +K + K F++ + ++++ + + G+LE AEEL +
Sbjct: 345 IVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQ 404
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
G P+ T+ I D NG ++ A++ E
Sbjct: 405 EMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFE 439
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/347 (19%), Positives = 151/347 (43%), Gaps = 15/347 (4%)
Query: 117 PETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK 176
P+T+ T+ +L+N C E +A L+ +M E + + +NS++ K+G
Sbjct: 133 PDTT----TFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSL 188
Query: 177 IPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLA 236
++++M ++ D +TY+ + +L I A + +EM+ G + + T+++L
Sbjct: 189 ALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKG-IKSSLVTYNSLV 247
Query: 237 SIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAF 294
+AG + + LK++ +R ++ + LI ++ + G L E +++ + +
Sbjct: 248 GGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGIS 307
Query: 295 PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAE 354
PNT I+Y +++ L A + DI +I Y K R++
Sbjct: 308 PNT--ITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGM 365
Query: 355 ELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIR 414
+L + +RG N T+ I + ++G +++A + ++ + G +P T
Sbjct: 366 KLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLG------VLPDVMTYG 419
Query: 415 TFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 461
+ ++ A E L+K+ +L + ++ +I G+
Sbjct: 420 ILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKV 466
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 109/261 (41%), Gaps = 5/261 (1%)
Query: 114 VDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGH 173
++L + N T ++NC+C+ T A ++L K+ +L + FN+L+
Sbjct: 91 MELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESK 150
Query: 174 PEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFS 233
+ ++ M + P+ TYN + + D S A ++ +M + V AD T+S
Sbjct: 151 VSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMD-ERNVKADVFTYS 209
Query: 234 NLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--R 291
+ G + A KE+E + L Y L+ + G ++ ++ + + R
Sbjct: 210 TIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSR 269
Query: 292 LAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLE 351
PN I++ +I V V L A + +KE + + + N ++ Y + RL
Sbjct: 270 KIIPNV--ITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLS 327
Query: 352 NAEELKERARRRGADPNAKTW 372
A + + R P+ T+
Sbjct: 328 EANNMLDLMVRNNCSPDIVTF 348
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 70/149 (46%), Gaps = 2/149 (1%)
Query: 59 GDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP- 117
G L L D AL++ E+++K MN + I ++ + K ++ A N F LP
Sbjct: 419 GILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPC 478
Query: 118 -ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK 176
N +TY +++ CK+ +A LL KM+E + +N+L+ + + G
Sbjct: 479 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTA 538
Query: 177 IPAIIQEMKASSIMPDSYTYNVWMRALAA 205
+I+EMK+ D+ + + + L++
Sbjct: 539 SAKLIEEMKSCGFSADASSIKMVIDMLSS 567
>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 118/277 (42%), Gaps = 3/277 (1%)
Query: 101 AKVQGIDAAENYFVDL--PETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSS 158
AK+ D + +F D+ TY +++C CKE E A L E+MK L +
Sbjct: 106 AKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDT 165
Query: 159 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 218
+ +NS++ + K G + +EMK PD TYN + + E
Sbjct: 166 VTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYRE 225
Query: 219 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 278
MK +G + + ++S L + + G+ ++A + ++ + Y LI + G
Sbjct: 226 MKGNG-LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIG 284
Query: 279 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 338
NLS+ +R+ + ++Y +I L + + + AE+ F + ++ ++ N
Sbjct: 285 NLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYN 344
Query: 339 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 375
+I + K ++ A EL + RG P+ + F
Sbjct: 345 ALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTF 381
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 120/303 (39%), Gaps = 13/303 (4%)
Query: 138 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 197
M E+A KMK + + N L+ +AK G + + ++M + P +TYN
Sbjct: 75 MLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYN 134
Query: 198 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 257
+ + + D+ A + EEMK G V D T++++ + + G + +E+++
Sbjct: 135 IMIDCMCKEGDVEAARGLFEEMKFRGLV-PDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD 193
Query: 258 RNAHRDLSAYQFLITLYGQTGNLS---EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 314
D+ Y LI + + G L E YR + L PN +SY ++
Sbjct: 194 MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLK-PNV--VSYSTLVDAFCKEGM 250
Query: 315 LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 374
+ A K + + + +I A K G L +A L + G + N T+
Sbjct: 251 MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTA 310
Query: 375 FSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 434
D MK A + G+ D +P+ + + F + K++D A L
Sbjct: 311 LIDGLCDAERMKEAEELF------GKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLN 364
Query: 435 ILK 437
LK
Sbjct: 365 ELK 367
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/241 (19%), Positives = 98/241 (40%), Gaps = 3/241 (1%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
+N ++ K G E + +EMK ++PD+ TYN + V + EEMK
Sbjct: 133 YNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMK 192
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
D D T++ L + + + G +E++ ++ +Y L+ + + G +
Sbjct: 193 -DMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMM 251
Query: 281 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 340
+ + + +R +Y ++I + +L A + E +++ +
Sbjct: 252 QQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTAL 311
Query: 341 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 400
I R++ AEEL + G PN ++ +++ +M A++ L + GR
Sbjct: 312 IDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL--KGR 369
Query: 401 G 401
G
Sbjct: 370 G 370
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 108/245 (44%), Gaps = 4/245 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY +L++ C ++AE L KM + + +N+L+ + K + ++ ++
Sbjct: 304 NVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELL 363
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
E+K I PD Y ++ L ++ I A+ V+ EMK G + A+ ++ L Y +
Sbjct: 364 NELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG-IKANSLIYTTLMDAYFK 422
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
+G + L E++ + + + LI + +S+ + + F AN +
Sbjct: 423 SGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAA 482
Query: 302 -YLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+ MI L + A F++ + G T++M G + K+G + A L+++
Sbjct: 483 IFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNF-KQGNVLEALALRDK 541
Query: 360 ARRRG 364
G
Sbjct: 542 MAEIG 546
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 30/162 (18%), Positives = 67/162 (41%)
Query: 229 WTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWR 288
+ F L S+ ++ G+ E+A + +++ + L+ + + G +V R ++
Sbjct: 60 FGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFK 119
Query: 289 SLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEG 348
+ A +Y MI + D+ A F+E + D N MI + K G
Sbjct: 120 DMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVG 179
Query: 349 RLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
RL++ E + +P+ T+ + + + G + + ++
Sbjct: 180 RLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLE 221
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 85/209 (40%), Gaps = 13/209 (6%)
Query: 286 IWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 345
+W + + P L VL++L L A +CF + + R N ++ +A
Sbjct: 49 LWSTRNVCVPGFGVFDAL--FSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFA 106
Query: 346 KEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGK 405
K G+ ++ + + GA P T+ I D + GD++ A E+ G
Sbjct: 107 KLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRG------ 160
Query: 406 WVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVM 465
VP + T + + F + +D F E +K + V + LI + G+ P+
Sbjct: 161 LVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKL-PIG 219
Query: 466 L---RRLKMEKVEVSEAS-KKLLEAICVE 490
L R +K ++ + S L++A C E
Sbjct: 220 LEFYREMKGNGLKPNVVSYSTLVDAFCKE 248
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 87/210 (41%), Gaps = 12/210 (5%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET---SKNHLTYGSLL 130
L L + M++ + TV + +D + K + + A +YF + N + +++
Sbjct: 429 GLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMI 488
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
+ CK+ E A L E+M + L + SLM K G+ + A+ +M +
Sbjct: 489 DGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMK 548
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA-- 248
D Y + L+ N + A +EEM +G + S L Y E G ++A
Sbjct: 549 LDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHY-ELGCIDEAVE 607
Query: 249 ------ERALKELENRNAHRDLSAYQFLIT 272
+ L +N NA ++ + Q L++
Sbjct: 608 LQSYLMKHQLLTSDNDNALPNIYSDQNLVS 637
>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 525
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 138/340 (40%), Gaps = 21/340 (6%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + + YG+L+N CK T A LL KM++ + + + +N ++ K G +
Sbjct: 158 SFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACG 217
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+ EM I D +TYN + GA R++ EM V D TF+ L
Sbjct: 218 LCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDAL 277
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNT 297
+ G+ +A + R D+ + L+ + G +SE ++ + R PN
Sbjct: 278 CKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNV 337
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
ISY +I +K + A + E D N ++ +K GR+ +L
Sbjct: 338 --ISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLV 395
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 417
E R G P+ T+ + D YL+ + A+ + +DTG S IRT+
Sbjct: 396 EAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTG---------ISPNIRTY- 445
Query: 418 RHFEQEKDVDGA--EGFLEILKKAVDDLGVEVFEPLIRTY 455
+DG G ++ K+ L V+ P IRTY
Sbjct: 446 -----NILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTY 480
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/297 (20%), Positives = 120/297 (40%), Gaps = 35/297 (11%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N + Y +++ CKE + +A L +M + +NSL+ + G + ++
Sbjct: 195 NLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLL 254
Query: 182 QEM-KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG---------RVAADWT- 230
EM + PD YT+N+ + AL + ++ A V M + G + W
Sbjct: 255 NEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCL 314
Query: 231 ------------------------TFSNLASIYVEAGLFEKAERALKELENRNAHRDLSA 266
++S L + Y + + ++A R L E+ RN D
Sbjct: 315 RGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVT 374
Query: 267 YQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE 326
Y L+ ++G + + + ++R + I+Y ++ + + L A F+
Sbjct: 375 YNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIV 434
Query: 327 SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
+ +IR N++I K GR++ A+E+ + +G PN +T+ I + R G
Sbjct: 435 DTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREG 491
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 123/299 (41%), Gaps = 38/299 (12%)
Query: 77 LSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYC 134
L+E + K + V I +D + K+ + A N F + + + ++ +L+N +C
Sbjct: 254 LNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWC 313
Query: 135 KELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSY 194
+A+ + ++M E + + +++L+ Y K ++ ++ EM +++PD+
Sbjct: 314 LRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTV 373
Query: 195 TYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE 254
TYN + L+ + ++E M+ G+ A D T++ L Y++ +KA +
Sbjct: 374 TYNCLLDGLSKSGRVLYEWDLVEAMRASGQ-APDLITYNVLLDDYLKRECLDKALALFQH 432
Query: 255 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 314
+ + ++ Y LI + G + I++ L +
Sbjct: 433 IVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSV---------------------- 470
Query: 315 LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 373
GC +IR N+MI +EG L+ AE L G PNA T++
Sbjct: 471 ------------KGCRP-NIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFD 516
>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
Length = 543
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 117/253 (46%), Gaps = 5/253 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N TYG L+N +CK E AE LL M+ +G + + FN+++ Y + G + +
Sbjct: 271 NERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVK 330
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M+ I D YTYN L VN ++ A+ ++ M G V ++ T++ L SI+ +
Sbjct: 331 AAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKG-VPPNYVTYTTLISIHCK 389
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTAN 299
G +A R +E+ + A + Y ++ Y + G++ E R + + + P+
Sbjct: 390 EGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDV-- 447
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+Y +++ + A K F+E + ++ +I AKEGR E A +L +
Sbjct: 448 YTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLYDD 507
Query: 360 ARRRGADPNAKTW 372
+ G P+ +
Sbjct: 508 MLKAGLTPDDSLY 520
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/338 (20%), Positives = 135/338 (39%), Gaps = 38/338 (11%)
Query: 94 AIHLDLVAKVQGIDAAENYFVDLPETSK--NHLTYGSLLNCYCKELMTEKAEALLEKMKE 151
++ +D K +D A ++P N L Y SLL+CY + + + LLE M+
Sbjct: 136 SVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMEN 195
Query: 152 LNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISG 211
+ + + L+ + G K+ A++ EMKA ++ D Y Y + A ++
Sbjct: 196 GGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRR 255
Query: 212 AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 271
A V +E +G + + T+ L + + + G E AE L +++ R + + +I
Sbjct: 256 ASEVFDECVGNG-IEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMI 314
Query: 272 TLYGQTGNLSEVYRI-----------------------WRSLRLAFPNTA---------- 298
Y + G + ++ R R+A T
Sbjct: 315 DGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVP 374
Query: 299 --NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
++Y +I + D+ A + F+E A + NVM+ Y K+G + AE
Sbjct: 375 PNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERF 434
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
++ ++G P+ T+ + NG + +A+ E+
Sbjct: 435 RKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEE 472
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/342 (20%), Positives = 134/342 (39%), Gaps = 7/342 (2%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + L +++ +CK + A ALL++M + +++ +NSL+ Y + ++
Sbjct: 129 SVSPLAASVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQE 188
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+++ M+ I TY + + +L+ DIS E V++EMK VA D ++ + + Y
Sbjct: 189 LLEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAK-NVAGDVYLYTAVINAY 247
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
AG +A E + Y LI + + G + + ++
Sbjct: 248 CRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQ 307
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
I + MI + A K E D+ N + + R+ A+ L
Sbjct: 308 IIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHI 367
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
+G PN T+ + + GDM A + G+G +PS T M
Sbjct: 368 MIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREM--AGKG----AMPSVVTYNVMMDG 421
Query: 420 FEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 461
+ ++ + AE F + ++K V + L+ + G+
Sbjct: 422 YIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKV 463
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 144/322 (44%), Gaps = 3/322 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
A +L ++M+K G+ V I +D + K Q +D A F +D + + +T+ SL++
Sbjct: 396 AFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLID 455
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
K + A + EKM + + +S+ + SL+ + G E I ++M + P
Sbjct: 456 GLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSP 515
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D N +M + + + EE+K R D ++S L ++AG +
Sbjct: 516 DLQLLNTYMDCMFKAGEPEKGRAMFEEIKAR-RFVPDARSYSILIHGLIKAGFANETYEL 574
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
++ + D AY +I + + G +++ Y++ ++ ++Y ++I L
Sbjct: 575 FYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAK 634
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+ L A F+E +S ++ + + +I + K GR++ A + E ++G PN T
Sbjct: 635 IDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYT 694
Query: 372 WEIFSDYYLRNGDMKLAVDCLE 393
W D ++ ++ A+ C +
Sbjct: 695 WNSLLDALVKAEEINEALVCFQ 716
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/347 (18%), Positives = 145/347 (41%), Gaps = 39/347 (11%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
AL L + M+ ++ + + +D KV +D A +F ++ + +TY S++
Sbjct: 222 ALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIG 281
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK ++A + E +++ + +N+++ Y G ++ ++++ +A +P
Sbjct: 282 VLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIP 341
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV----------- 240
YN + L + + A +V EEMK+D A + +T++ L +
Sbjct: 342 SVIAYNCILTCLRKMGKVDEALKVFEEMKKDA--APNLSTYNILIDMLCRAGKLDTAFEL 399
Query: 241 -----EAGLF-------------------EKAERALKELENRNAHRDLSAYQFLITLYGQ 276
+AGLF ++A +E++ + D + LI G+
Sbjct: 400 RDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGK 459
Query: 277 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 336
G + + Y+++ + + T +I Y ++I+ N K +K+ + + D+++
Sbjct: 460 VGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQL 519
Query: 337 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
N + K G E + E + R P+A+++ I ++ G
Sbjct: 520 LNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAG 566
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 114/274 (41%), Gaps = 8/274 (2%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y +++ +CK KA LLE+MK + + + S++ AK ++ + +E K
Sbjct: 590 YNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 649
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
+ I + Y+ + V I A ++EE+ + G + + T+++L V+A
Sbjct: 650 SKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG-LTPNLYTWNSLLDALVKAEEI 708
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
+A + ++ + Y LI + ++ + W+ ++ + ISY M
Sbjct: 709 NEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTM 768
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
I L ++ A F +++ D N MI + R +A L E RRRG
Sbjct: 769 ISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828
Query: 366 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ KT + D +N DCLE+A G
Sbjct: 829 PIHNKTCVVLLDTLHKN-------DCLEQAAIVG 855
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 2/147 (1%)
Query: 79 ENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKE 136
E + ++G+ + LD + K + I+ A F + E + N +TYG L+N CK
Sbjct: 681 EELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKV 740
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 196
KA ++M++ + S++ + ++++ AK G+ + A+ KA+ +PDS Y
Sbjct: 741 RKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACY 800
Query: 197 NVWMRALAAVNDISGAERVIEEMKRDG 223
N + L+ N A + EE +R G
Sbjct: 801 NAMIEGLSNGNRAMDAFSLFEETRRRG 827
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 78/193 (40%), Gaps = 1/193 (0%)
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
++Q M+ P Y + A +AVN + ++M+ G F+ L +
Sbjct: 155 VVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELG-YEPTVHLFTTLIRGF 213
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
+ G + A L E+++ + D+ Y I +G+ G + ++ + +
Sbjct: 214 AKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDE 273
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
++Y +MI VL L A + F+ E N MI Y G+ + A L ER
Sbjct: 274 VTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLER 333
Query: 360 ARRRGADPNAKTW 372
R +G+ P+ +
Sbjct: 334 QRAKGSIPSVIAY 346
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 84/200 (42%), Gaps = 3/200 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A +L E M+ +G TV +D +AK+ +D A F + N + Y SL++
Sbjct: 606 AYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLID 665
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ K ++A +LE++ + L + +NSL+ K + Q MK P
Sbjct: 666 GFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTP 725
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ TY + + L V + A +EM++ G + +++ + S +AG +A
Sbjct: 726 NQVTYGILINGLCKVRKFNKAFVFWQEMQKQG-MKPSTISYTTMISGLAKAGNIAEAGAL 784
Query: 252 LKELENRNAHRDLSAYQFLI 271
+ D + Y +I
Sbjct: 785 FDRFKANGGVPDSACYNAMI 804
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 130/303 (42%), Gaps = 9/303 (2%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY SL++ CK E+A LLE M + + + + +N+L+ Y KTG +I+
Sbjct: 209 VTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIER 268
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M S PD T+N + + I A V+ MK+ G A + T++ L S +AG
Sbjct: 269 MIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKK-GLCAPNLVTYNVLISGLCDAG 327
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANIS 301
+A L E++ R D+ Y LI ++ + + + ++I + R P+ IS
Sbjct: 328 RANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPD--GIS 385
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y + L+ + A A ++ N ++ RL+ A L R
Sbjct: 386 YCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMR 445
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETI-RTFMRHF 420
R G DP A T+E+ + G + A + L + G V SS TI T R
Sbjct: 446 RVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGI---QPLVSSSGTIVHTLAREG 502
Query: 421 EQE 423
+Q+
Sbjct: 503 KQD 505
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/369 (21%), Positives = 146/369 (39%), Gaps = 32/369 (8%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
NH+TY +L+ +CK E+A LL +MKE + +S++ TG+ +
Sbjct: 104 NHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYF 163
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+E + PDS +N+ + L N +S A ++IEEM G + D T+++L +
Sbjct: 164 RE--SVECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERG-IVPDVVTYNSLIDGLCK 220
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
+ E+A + L+ + R +L Y LI Y +TG +++ + + + ++
Sbjct: 221 SYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVT 280
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
+ ++I + A + + G ++ NV+I GR A EL
Sbjct: 281 FNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMD 340
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR-GDGGKW-------------- 406
RG P+ T+ + RN ++ A ++ G DG +
Sbjct: 341 GRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFD 400
Query: 407 --------------VPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLI 452
+P+ T + M + +D A L ++++ D +E L+
Sbjct: 401 EAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLV 460
Query: 453 RTYAAAGRT 461
AGR
Sbjct: 461 TGLCKAGRV 469
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 109/271 (40%), Gaps = 8/271 (2%)
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+++T N +R L A ++ + + T++ L + +AG E+A +
Sbjct: 68 NNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQL 127
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
L E++ R D+ + ++ TGNLS + +R P++ + L + L
Sbjct: 128 LAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECAPDSVLFNIL--VHGLCK 185
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
L A + +E D+ N +I K R+E A +L E +R PN T
Sbjct: 186 ANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVT 245
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG 431
+ Y + G LA +E+ I +G P T + + F Q+ +D A
Sbjct: 246 YNTLIYGYCKTGCTGLAHQLIERMIQSGTH------PDVVTFNSLISGFCQKSKIDKACE 299
Query: 432 FLEILKKAVDDLGVEVFEPLIRTYAAAGRTS 462
L ++KK + + + LI AGR +
Sbjct: 300 VLHLMKKGLCAPNLVTYNVLISGLCDAGRAN 330
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 147/346 (42%), Gaps = 28/346 (8%)
Query: 70 LYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDA-AENYFVD----LPET----- 119
L + K ++ E R M + +S++ I D+V ID ++Y ++ L ET
Sbjct: 179 LVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRK 238
Query: 120 -SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
N +TY +L+ YCK T A L+E+M + + FNSL++ + + +K
Sbjct: 239 VRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKAC 298
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGR-VAADWTTFSNLAS 237
++ MK P+ TYNV + L + A ++ EM DGR + D T+++L
Sbjct: 299 EVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEM--DGRGILPDIITYNSLIG 356
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFP 295
I+ E+A + + R D +Y L ++ E + + ++ A P
Sbjct: 357 IFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIP 416
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWES-GC----ATYDIRVTNVMIGAYAKEGRL 350
N ++ ++++ L + L A GC +TY++ VT + K GR+
Sbjct: 417 NL--FTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGL-----CKAGRV 469
Query: 351 ENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 396
++A+E+ G P + R G LA+ ++ +
Sbjct: 470 DDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVV 515
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 119/264 (45%), Gaps = 4/264 (1%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY +L++ C TE A LL +M++ N+ + ++S++ K PE+ +++EM
Sbjct: 83 TYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEM 142
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
A+ PD + +N M+ A N++ A V + M G D ++ L + G
Sbjct: 143 MAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESG-YKPDNVSYHILIHGLAKIGK 201
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYG--QTGNLSEVYRIWRSLRLAFPNTANISY 302
+++ + L E+ R A + F ++G +TG L + ++ S+ A +Y
Sbjct: 202 LDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTY 261
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL-KERAR 361
+I L + + A + F++ C D N +I Y K G ++ AE+L +E +
Sbjct: 262 TTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSG 321
Query: 362 RRGADPNAKTWEIFSDYYLRNGDM 385
G P T+ D + + G +
Sbjct: 322 GAGLQPTIVTFNTLIDGFCKLGKL 345
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 105/258 (40%), Gaps = 2/258 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
+ N TY S++ KE E++ +LE+M FN +M +A++ + EK
Sbjct: 113 AANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKARE 172
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK-RDGRVAADWTTFSNLASI 238
+ Q M S PD+ +Y++ + LA + + + +++ EM R + TFS L
Sbjct: 173 VYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHG 232
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
G EKA + + Y LI + + + ++ + A
Sbjct: 233 LCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPD 292
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVT-NVMIGAYAKEGRLENAEELK 357
++Y ++I + AEK ++E G VT N +I + K G+L A EL
Sbjct: 293 AVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELV 352
Query: 358 ERARRRGADPNAKTWEIF 375
+G + T+ I
Sbjct: 353 AEMGTKGLAADTCTYRIL 370
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 124/294 (42%), Gaps = 10/294 (3%)
Query: 169 AKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAAD 228
AK G + + + MK+ S +P TYNV + + + A + + MKR+ RV D
Sbjct: 21 AKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREKRVEPD 80
Query: 229 WTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWR 288
T++ L S +G E A + L E+ ++N ++ Y +I + E Y++
Sbjct: 81 RWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLE 140
Query: 289 SLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKE 347
+ A N ++ ++Q ++ A + ++ ESG ++ +++I AK
Sbjct: 141 EMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSY-HILIHGLAKI 199
Query: 348 GRL-ENAEELKERA-RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGK 405
G+L E+ + L E A R G PN T+ R G+++ A++ ++ G
Sbjct: 200 GKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAG------ 253
Query: 406 WVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
P+ T T + + + V A E + +A + LI Y G
Sbjct: 254 CKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRG 307
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/274 (19%), Positives = 105/274 (38%), Gaps = 35/274 (12%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +T+ +L++ C+ EKA + M E + + +L+ + + +
Sbjct: 222 NVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELF 281
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
++M + I PD+ YN + + AE++ EM + TF+ L + +
Sbjct: 282 EKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCK 341
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G +A + E+ + D Y+ LI + L E +++ +R
Sbjct: 342 LGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMR---------- 391
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
EK F C ++ +G K G ++ A + E R
Sbjct: 392 -----------------EKKFLLDPVSCVSF--------VGGLCKTGNIDQAYAVFEATR 426
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 395
+ GA PN +T+ I S+ ++ G ++ A +E A
Sbjct: 427 KSGAVPNPETFRILSESLIKLGRVEDAQKLMEPA 460
>gi|449469490|ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 150/345 (43%), Gaps = 24/345 (6%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQ 182
+Y +L+N Y + E + LLE+MK + + + +N+++ A+ E + +
Sbjct: 184 FSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFA 243
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
EM+ + PD TYN + A AA AE V + M +G + + TT+S + + +
Sbjct: 244 EMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMI-EGGIVPEITTYSYIVETFGKL 302
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANI 300
G EK LKE+E+ D+S+Y LI + + G++ E +++ ++ A PN +
Sbjct: 303 GKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTY 362
Query: 301 SYLNMIQVLVNLKDLPG----AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
S +L+NL G + F + + A D N++I + + G + L
Sbjct: 363 S------ILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTL 416
Query: 357 KERARRRGADPNAKTWE--IFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIR 414
DPN +T+E +F+ G L D +K + G G VPSS+
Sbjct: 417 FHDLVDENIDPNMETYEGLVFA-----CGKGGLHEDA-KKILFHMNGKG--IVPSSKAYS 468
Query: 415 TFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
+ + Q D A + + ++ + LI T+A G
Sbjct: 469 GLIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGG 513
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 131/324 (40%), Gaps = 3/324 (0%)
Query: 77 LSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYC 134
L + ME G +S + ++ AK+ I A + F + N TY LLN Y
Sbjct: 311 LLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYG 370
Query: 135 KELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSY 194
K + L +MKE + + +N L+ ++ + G+ +++ + ++ +I P+
Sbjct: 371 KHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNME 430
Query: 195 TYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE 254
TY + A A++++ M G V + +S L Y +A L+++A A
Sbjct: 431 TYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSS-KAYSGLIEAYGQAALYDEALVAFNT 489
Query: 255 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 314
+ + + Y LI + + G E I +R + S+ +I+
Sbjct: 490 MNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQ 549
Query: 315 LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 374
A K F E E D + ++G Y G ++ ++E + G P+ + +
Sbjct: 550 YEEAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGILPSVLCYCM 609
Query: 375 FSDYYLRNGDMKLAVDCLEKAIDT 398
Y +NG A + L++ I T
Sbjct: 610 MLAVYAKNGRWDDASELLDEMIKT 633
>gi|356508736|ref|XP_003523110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 680
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 121/262 (46%), Gaps = 3/262 (1%)
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
T +AEAL E+++E L + +N+L+ Y +TG + ++ EM+ + + PD TY++
Sbjct: 292 THEAEALFEEIRENGLEPRTRAYNALLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQTYSL 351
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
+ A A V++EM+ V + FS + + Y + G ++K+ + LK++++
Sbjct: 352 LIDVYAHAGRWESARIVLKEMEASN-VQPNSYVFSRILANYRDKGEWQKSFQVLKDMKSS 410
Query: 259 NAHRDLSAYQFLITLYGQTGNLSEVYRIW-RSLRLAFPNTANISYLNMIQVLVNLKDLPG 317
D Y +I +G+ L + R L P +++ +I
Sbjct: 411 GVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDI-VTWNTLIDCHCKSGRHDM 469
Query: 318 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 377
AE+ F E + + I N+MI + ++ R E + + +G PN+ T+ D
Sbjct: 470 AEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSITYTTLVD 529
Query: 378 YYLRNGDMKLAVDCLEKAIDTG 399
Y ++G A++CLE TG
Sbjct: 530 VYGKSGRFSDAIECLEVLKSTG 551
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 116/291 (39%), Gaps = 7/291 (2%)
Query: 169 AKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAAD 228
+G + A+ +E++ + + P + YN ++ + AE V+ EM++ G V D
Sbjct: 287 GNSGRTHEAEALFEEIRENGLEPRTRAYNALLKGYVRTGSLKDAEFVVSEMEKAG-VKPD 345
Query: 229 WTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWR 288
T+S L +Y AG +E A LKE+E N + + ++ Y G + +++ +
Sbjct: 346 EQTYSLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRILANYRDKGEWQKSFQVLK 405
Query: 289 SLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEG 348
++ + Y MI L A F+ S DI N +I + K G
Sbjct: 406 DMKSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNTLIDCHCKSG 465
Query: 349 RLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVP 408
R + AEEL ++RG P T+ I + + L K G P
Sbjct: 466 RHDMAEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQG------LQP 519
Query: 409 SSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
+S T T + + + A LE+LK ++ LI YA G
Sbjct: 520 NSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRG 570
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 101/229 (44%), Gaps = 1/229 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY L++ Y E A +L++M+ N+ +S F+ ++ Y G +K ++++M
Sbjct: 348 TYSLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRILANYRDKGEWQKSFQVLKDM 407
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
K+S + PD + YNV + N + A E M +G + D T++ L + ++G
Sbjct: 408 KSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEG-IPPDIVTWNTLIDCHCKSGR 466
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+ AE E++ R ++ Y +I G+ +V ++ +I+Y
Sbjct: 467 HDMAEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSITYTT 526
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
++ V A +C + +S + N +I AYA+ G E A
Sbjct: 527 LVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSELA 575
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/271 (19%), Positives = 115/271 (42%), Gaps = 4/271 (1%)
Query: 62 LKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--T 119
L RD+ + + ++ ++M+ G+ + +D K +D A F +
Sbjct: 388 LANYRDKGEWQKSFQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGI 447
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
+ +T+ +L++C+CK + AE L +M++ +N ++ + E++ A
Sbjct: 448 PPDIVTWNTLIDCHCKSGRHDMAEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTA 507
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+ +M++ + P+S TY + S A +E +K G T ++ L + Y
Sbjct: 508 FLSKMQSQGLQPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTG-FKPTSTMYNALINAY 566
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
+ GL E A A + + L A LI +G+ +E + + + ++
Sbjct: 567 AQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDV 626
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEW-ESGC 329
++Y +++ L+ ++ ++E SGC
Sbjct: 627 VTYTTLMKALIRVEKFQKVPAVYEEMVASGC 657
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 83/211 (39%), Gaps = 17/211 (8%)
Query: 14 AKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWE-VGDTLKKLRDRKLYY 72
K + + E L+ + ++G S N + S +WE V L K++ + L
Sbjct: 462 CKSGRHDMAEELFSEMQQRGYSPCIT--TYNIMINSMGEQQRWEQVTAFLSKMQSQGLQP 519
Query: 73 PALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNC 132
++ + ++ G + SD AI V K G Y +L+N
Sbjct: 520 NSITYTTLVDVYGKSGRFSD-AIECLEVLKSTGFKPTST-------------MYNALINA 565
Query: 133 YCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPD 192
Y + ++E A M L S + NSL+ + + + A++Q MK ++I PD
Sbjct: 566 YAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPD 625
Query: 193 SYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
TY M+AL V V EEM G
Sbjct: 626 VVTYTTLMKALIRVEKFQKVPAVYEEMVASG 656
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 110/259 (42%), Gaps = 11/259 (4%)
Query: 124 LTYGSLLNCYCKELMTEKA-EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQ 182
L Y L+N + +EK EA L +++ + + +N+L+ A+ G EK ++
Sbjct: 140 LLYSILINALGR---SEKLYEAFLLSQRQV---LTPLTYNALIGACARNGDVEKALNLMS 193
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGA--ERVIEEMKRDGRVAADWTTFSNLASIYV 240
+M+ PD Y+ ++ L N I +++ E++ D ++ D +++ +
Sbjct: 194 KMRRDGYQPDFVNYSSIIQYLTRSNKIDSPILQKLYAEIETD-KIEIDGHLMNDIIVGFS 252
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
+AG +A R L ++ + S +I G +G E ++ +R
Sbjct: 253 KAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGLEPRTR 312
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
+Y +++ V L AE E E D + +++I YA GR E+A + +
Sbjct: 313 AYNALLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDVYAHAGRWESARIVLKEM 372
Query: 361 RRRGADPNAKTWE-IFSDY 378
PN+ + I ++Y
Sbjct: 373 EASNVQPNSYVFSRILANY 391
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
L SL+N + ++ +A A+L+ MKE N+ + + +LM + +K+PA+ +E
Sbjct: 592 LALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKALIRVEKFQKVPAVYEE 651
Query: 184 MKASSIMPD 192
M AS PD
Sbjct: 652 MVASGCTPD 660
>gi|255660858|gb|ACU25598.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 418
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 119/260 (45%), Gaps = 9/260 (3%)
Query: 133 YCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPD 192
+CKE +A+++ + + + L S + FN+LM Y + G ++ + M AS + PD
Sbjct: 146 FCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPD 205
Query: 193 SYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERAL 252
YTY+V + L + + A + EM G V + TF+ L ++ + G+ + A
Sbjct: 206 VYTYSVLINGLCKESKVDEANELFNEMLDRGLV-PNGVTFTTLIDVHCKNGMVDSAMEIY 264
Query: 253 KELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNL 312
K++ ++ DL Y LI + G+L +V + + + I+Y +I
Sbjct: 265 KQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLIDGCCKE 324
Query: 313 KDLPGAEKCFKEWESGCATYDIRVTNV----MIGAYAKEGRLENAEELKERARRRGADPN 368
DL A E+ IR+ NV ++ +EGR ++AE++ G P+
Sbjct: 325 GDLETAF----EFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVGLKPD 380
Query: 369 AKTWEIFSDYYLRNGDMKLA 388
T+ + + + + GD++ A
Sbjct: 381 NGTYTMIINEFCKKGDVRTA 400
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 105/226 (46%), Gaps = 15/226 (6%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
+L M G+ V ++ ++ + K +D A F ++ + N +T+ +L++
Sbjct: 190 GFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLID 249
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSS--MPFNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
+CK M + A + ++M L+ GFS + +N+L+ K G +++ A+I EM + +
Sbjct: 250 VHCKNGMVDSAMEIYKQM--LSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGL 307
Query: 190 MPDSYTYNVWMRALAAVNDISGA----ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
PD TY + D+ A +R+I+E R VA ++ L S + G
Sbjct: 308 KPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVA-----YTALVSGLCQEGRA 362
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 291
+ AE+ +E+ + D Y +I + + G++ R+ + ++
Sbjct: 363 DDAEKMFREMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQ 408
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 87/202 (43%), Gaps = 1/202 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY L+N CKE ++A L +M + L + + F +L+ ++ K G + I ++M
Sbjct: 208 TYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNGMVDSAMEIYKQM 267
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ PD TYN + L D+ +I+EM +G + D T++ L + G
Sbjct: 268 LSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNG-LKPDKITYTTLIDGCCKEGD 326
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
E A K + + D AY L++ Q G + +++R + N +Y
Sbjct: 327 LETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVGLKPDNGTYTM 386
Query: 305 MIQVLVNLKDLPGAEKCFKEWE 326
+I D+ A + KE +
Sbjct: 387 IINEFCKKGDVRTASRLLKEMQ 408
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 55/104 (52%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +L++ CKE E A ++M + ++ ++ + +L++ + G + + +E
Sbjct: 312 ITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFRE 371
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAA 227
M + + PD+ TY + + D+ A R+++EM+RDG V
Sbjct: 372 MLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQRDGHVPC 415
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/199 (19%), Positives = 80/199 (40%), Gaps = 5/199 (2%)
Query: 194 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 253
Y +N+ M ++ A+ V + + + G + +F+ L + Y+ G ++ R
Sbjct: 137 YFFNIVMHRFCKEGEMRRAQSVFDAITKWG-LRPSVVSFNTLMNGYIRLGDLDEGFRLKS 195
Query: 254 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVN 311
+ D+ Y LI + + E ++ + R PN +++ +I V
Sbjct: 196 AMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPN--GVTFTTLIDVHCK 253
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+ A + +K+ S + D+ N +I K+G L+ L + G P+ T
Sbjct: 254 NGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKIT 313
Query: 372 WEIFSDYYLRNGDMKLAVD 390
+ D + GD++ A +
Sbjct: 314 YTTLIDGCCKEGDLETAFE 332
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 148/387 (38%), Gaps = 44/387 (11%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
AL L M+++G V + +D + K +D A ++ E + +TY +L++
Sbjct: 318 ALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALID 377
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
YCKE M + A +L+ M+ + G ++ +N L+ K K A++ +M + P
Sbjct: 378 GYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSP 437
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
TYN + VND+ A R++ M +G V W T+S + G E+A
Sbjct: 438 SLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQW-TYSVFIDTLCKEGRVEEAGTL 496
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTAN---------- 299
++ + + Y LI Y + G + Y + + PN+
Sbjct: 497 FDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCK 556
Query: 300 -----------------------ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 336
++Y +I ++ A K F S D+
Sbjct: 557 EKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCT 616
Query: 337 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 396
+ AY +G LE +++ + G P+ T+ + D Y R G A D L+ +
Sbjct: 617 YTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMV 676
Query: 397 DTGRGDGGKWVPSSETIRTFMRHFEQE 423
DTG PS + +++ E
Sbjct: 677 DTG------CKPSLYIVSILIKNLSHE 697
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 140/334 (41%), Gaps = 13/334 (3%)
Query: 104 QGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPF 161
+G+D A F+ +P+ +N ++Y +L++ C+ +A L M E N + +
Sbjct: 243 KGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTY 302
Query: 162 NSLMTLYAKTGHPEKIPA--IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM 219
L +YA +G K+ A + EMK P+ +TY V + L N + A +++ EM
Sbjct: 303 TVL--IYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEM 360
Query: 220 KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGN 279
G + + T++ L Y + G+ + A L +E+ + + Y LI +
Sbjct: 361 SEKGLIPS-VVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRK 419
Query: 280 LSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
+ + + + + + I+Y ++I + DL A + D +V
Sbjct: 420 VHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSV 479
Query: 340 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
I KEGR+E A L + + +G N + D Y + G + +A LE+ ++
Sbjct: 480 FIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDA 539
Query: 400 RGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 433
+P+S T + +EK + A +
Sbjct: 540 ------CLPNSYTYNVLIEGLCKEKKMKEASSLV 567
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 126/328 (38%), Gaps = 54/328 (16%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY ++ CKE E+A L + +K + + + + +L+ Y K G + ++++ M
Sbjct: 476 TYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERM 535
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERV-------------------IEEMKRDGRV 225
+ +P+SYTYNV + L + A + I EM +DG
Sbjct: 536 LNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAF 595
Query: 226 AADWTTFSNLASI---------------YVEAGLFEKAERALKELENRNAHRDLSAYQFL 270
F+++ S+ Y G+ E+ + + ++ DL Y L
Sbjct: 596 DHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVL 655
Query: 271 ITLYGQTGNLSEVYRIWR---------SLRLAFPNTANISYLNM---------IQVLVNL 312
I Y + G + + SL + N+S+ N I + N
Sbjct: 656 IDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNT 715
Query: 313 KDLPGAEKCF-KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+ A K F K E GC T D+ + +I + ++ RLE A+ L + RG P+
Sbjct: 716 LEYEIALKLFEKMVEHGC-TIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDI 774
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ D + G AV ++ ++ G
Sbjct: 775 YNSLLDCCCKLGVYAEAVRLVDAMVENG 802
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 99/252 (39%), Gaps = 12/252 (4%)
Query: 130 LNCYCKELMTEKAEALLEKMKELNLGF-------SSMPFNSLMTLYAKTGHPEKIPAIIQ 182
L CY LM+ L+++MK + L + FN+++ Y K G+ +
Sbjct: 159 LRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYAS 218
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
++ + + PD++TY + + A V M + G + +++NL EA
Sbjct: 219 KIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKG-CQRNEVSYTNLIHGLCEA 277
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANI 300
G +A + ++ N + Y LI +G E ++ + + PN
Sbjct: 278 GRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVH-- 335
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
+Y +I L + A K E + N +I Y KEG +++A E+ +
Sbjct: 336 TYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLM 395
Query: 361 RRRGADPNAKTW 372
PN +T+
Sbjct: 396 ESNSCGPNTRTY 407
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 78/397 (19%), Positives = 145/397 (36%), Gaps = 38/397 (9%)
Query: 7 FGRTKNIAKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLR 66
F K ++ + + AL D K G DV+ L + L + ++ L
Sbjct: 497 FDSVKAKGVKANEVIYTALIDGYCKVGKIDVA-YSLLERMLNDACLPNSYTYNVLIEGLC 555
Query: 67 DRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAE---NYFVDL---PETS 120
K A L M G+ TV I + + K D A N+ V L P+
Sbjct: 556 KEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVC 615
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
TY + L+ Y + M E+ + ++ KM E + + + L+ YA+ G +
Sbjct: 616 ----TYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDF 671
Query: 181 IQEMKASSIMPDSYTYNVWMRALA------------AVNDISG------AERVIEEMKRD 222
++ M + P Y ++ ++ L+ ++ +S A ++ E+M
Sbjct: 672 LKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEH 731
Query: 223 GRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 282
G D + + L + + + E+A+ + ++ R Y L+ + G +E
Sbjct: 732 G-CTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAE 790
Query: 283 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG----AEKCFKEWESGCATYDIRVTN 338
R+ A + L ++LV + G A+ F S YD
Sbjct: 791 AVRLVD----AMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWK 846
Query: 339 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 375
V+I K ++ EL + +G PN T+ +
Sbjct: 847 VLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLL 883
>gi|449446895|ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like [Cucumis sativus]
Length = 668
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 126/285 (44%), Gaps = 9/285 (3%)
Query: 117 PETSKNHLTYGSLLN-CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
P+T +TY ++L C + KA LL+++++ L + + +L+ + A E
Sbjct: 205 PDT----VTYSTMLTGCIRVKHGYAKAMELLKELQDNGLCMDCVSYGTLIAICASHNRLE 260
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
+M+A P+ + Y + A + D A+ +IE+MK G V + + L
Sbjct: 261 DAERFFNQMRAEGHSPNMFHYGSLLNAYSINGDYKKADELIEDMKLTGLVP-NKVILTTL 319
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
+YV GLFEK+ + L ELE+ + Y L+ + G++ E ++ ++
Sbjct: 320 LKVYVRGGLFEKSRKLLSELESLGYGENEMPYCLLMDGLAKAGSIREAKTVFDEMKAKNV 379
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEE 355
T ++ MI L A+ K++E+ YDI + N M+ AY + G +E+ +
Sbjct: 380 KTDGYAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVILNTMLCAYCRAGEMESVMQ 439
Query: 356 LKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 400
+ + P+ T+ I Y+ + KL + C D R
Sbjct: 440 MLRKMDDLAISPDYNTFHILIKYFFKE---KLYLLCYRTLEDMHR 481
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 3/228 (1%)
Query: 65 LRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKN 122
+R + Y A++L + ++ G+ + + A ++ AE +F + S N
Sbjct: 218 IRVKHGYAKAMELLKELQDNGLCMDCVSYGTLIAICASHNRLEDAERFFNQMRAEGHSPN 277
Query: 123 HLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQ 182
YGSLLN Y +KA+ L+E MK L + + +L+ +Y + G EK ++
Sbjct: 278 MFHYGSLLNAYSINGDYKKADELIEDMKLTGLVPNKVILTTLLKVYVRGGLFEKSRKLLS 337
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
E+++ + Y + M LA I A+ V +EMK V D S + S +
Sbjct: 338 ELESLGYGENEMPYCLLMDGLAKAGSIREAKTVFDEMKAKN-VKTDGYAHSIMISAFCRG 396
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
GL E+A+ K+ E D+ ++ Y + G + V ++ R +
Sbjct: 397 GLLEEAKLLAKDFEATYDRYDIVILNTMLCAYCRAGEMESVMQMLRKM 444
>gi|449487793|ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 150/345 (43%), Gaps = 24/345 (6%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQ 182
+Y +L+N Y + E + LLE+MK + + + +N+++ A+ E + +
Sbjct: 184 FSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFA 243
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
EM+ + PD TYN + A AA AE V + M +G + + TT+S + + +
Sbjct: 244 EMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMI-EGGIVPEITTYSYIVETFGKL 302
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANI 300
G EK LKE+E+ D+S+Y LI + + G++ E +++ ++ A PN +
Sbjct: 303 GKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTY 362
Query: 301 SYLNMIQVLVNLKDLPG----AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
S +L+NL G + F + + A D N++I + + G + L
Sbjct: 363 S------ILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTL 416
Query: 357 KERARRRGADPNAKTWE--IFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIR 414
DPN +T+E +F+ G L D +K + G G VPSS+
Sbjct: 417 FHDLVDENIDPNMETYEGLVFA-----CGKGGLHEDA-KKILFHMNGKG--IVPSSKAYS 468
Query: 415 TFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
+ + Q D A + + ++ + LI T+A G
Sbjct: 469 GLIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGG 513
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 131/324 (40%), Gaps = 3/324 (0%)
Query: 77 LSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYC 134
L + ME G +S + ++ AK+ I A + F + N TY LLN Y
Sbjct: 311 LLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYG 370
Query: 135 KELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSY 194
K + L +MKE + + +N L+ ++ + G+ +++ + ++ +I P+
Sbjct: 371 KHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNME 430
Query: 195 TYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE 254
TY + A A++++ M G V + +S L Y +A L+++A A
Sbjct: 431 TYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSS-KAYSGLIEAYGQAALYDEALVAFNT 489
Query: 255 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 314
+ + + Y LI + + G E I +R + S+ +I+
Sbjct: 490 MNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQ 549
Query: 315 LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 374
A K F E E D + ++G Y G ++ ++E + G P+ + +
Sbjct: 550 YEEAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGILPSVLCYCM 609
Query: 375 FSDYYLRNGDMKLAVDCLEKAIDT 398
Y +NG A + L++ I T
Sbjct: 610 MLAVYAKNGRWDDASELLDEMIKT 633
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 153/341 (44%), Gaps = 16/341 (4%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N + + +L+N C+E +A ALL++M E L + + + +++ K G ++
Sbjct: 176 NVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLL 235
Query: 182 QEM-KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
++M + S I P+ Y+ + L + A+ + EM+ G ++ + T++ + + +
Sbjct: 236 RKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKG-ISPNLFTYNCMINGFC 294
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTA 298
+G + +A+R L+E+ R D+ + LI + G E ++ + R PNT
Sbjct: 295 SSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNT- 353
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
I+Y +MI L AE+ F + + D+ +++I Y R+++ +L
Sbjct: 354 -ITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLH 412
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 418
RRG N T+ + + G++ A+D L++ I +G P+ T T +
Sbjct: 413 EMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSG------VCPNVVTCNTLLD 466
Query: 419 HFEQEKDVDGAEGFLEILKKAVDDLGVEV----FEPLIRTY 455
+ A ++++K+ DL EP ++TY
Sbjct: 467 GLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTY 507
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 147/367 (40%), Gaps = 26/367 (7%)
Query: 109 AENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMT 166
A+N F ++ E S N TY ++N +C +A+ LL +M E + + F+ L+
Sbjct: 267 AQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLIN 326
Query: 167 LYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA 226
K G + + EM I+P++ TYN + + N + AER+ M G +
Sbjct: 327 ALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKG-CS 385
Query: 227 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
D TFS L Y A + + L E+ R + Y LI + Q GNL+ +
Sbjct: 386 PDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDL 445
Query: 287 WRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGC----ATY-------D 333
+ + PN + L + L N L A + FK + A++ D
Sbjct: 446 LQEMISSGVCPNVVTCNTL--LDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPD 503
Query: 334 IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
++ N++I EG+ AEEL E RG P+ T+ D + + A +
Sbjct: 504 VQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFD 563
Query: 394 KAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDV-DGAEGFLEILKKAVDDLGVEVFEPLI 452
G + P T T + + + V DG E F E+ ++ + + + LI
Sbjct: 564 SMGSKG------FSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAI-TYRTLI 616
Query: 453 RTYAAAG 459
+ G
Sbjct: 617 HGFCQVG 623
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 141/351 (40%), Gaps = 37/351 (10%)
Query: 71 YYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAEN--YFVDLPETSKNHLTYGS 128
++ A +L M RG+ +D +K +DAAE Y + S + +T+
Sbjct: 334 FFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSI 393
Query: 129 LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS 188
L++ YC + LL +M L +++ + +L+ + + G+ ++QEM +S
Sbjct: 394 LIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSG 453
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
+ P+ T N + L + A + + M++ ++ D A
Sbjct: 454 VCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKS-KMDLD-------------------A 493
Query: 249 ERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMI 306
++E D+ Y LI G SE ++ + R P+T I+Y ++I
Sbjct: 494 SHPFNDVE-----PDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDT--ITYNSVI 546
Query: 307 QVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD 366
L L A + F S + D+ +I Y K GR+ + E+ RRG
Sbjct: 547 DGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIV 606
Query: 367 PNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 417
NA T+ + + G++ A+D ++ I +G P + TIR +
Sbjct: 607 ANAITYRTLIHGFCQVGNINGALDIFQEMISSG------VYPDTITIRNML 651
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/405 (18%), Positives = 158/405 (39%), Gaps = 25/405 (6%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK---NHLTYGSLL 130
A+ L + M + G+ +D + K+ +A N + E S+ N + Y +++
Sbjct: 196 AVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAII 255
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
+ K+ A+ L +M+E + + +N ++ + +G + +++EM +
Sbjct: 256 DGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMS 315
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
PD T++V + AL AE + EM G + + T++++ + + + AER
Sbjct: 316 PDVVTFSVLINALVKEGKFFEAEELYNEMLPRG-IIPNTITYNSMIDGFSKQNRLDAAER 374
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQV 308
+ + D+ + LI Y + + ++ + R NT I+Y +I
Sbjct: 375 MFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANT--ITYTTLIHG 432
Query: 309 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD-- 366
L +L A +E S ++ N ++ G+L++A E+ + ++ D
Sbjct: 433 FCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLD 492
Query: 367 ---------PNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 417
P+ +T+ I + G A + E+ G VP + T + +
Sbjct: 493 ASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRG------LVPDTITYNSVI 546
Query: 418 RHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTS 462
++ +D A + + V F LI Y GR
Sbjct: 547 DGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVG 591
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 110/264 (41%), Gaps = 18/264 (6%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLN 131
+KL M +RG+ + ++ ++AA + ++ + N +T +LL+
Sbjct: 407 GMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLD 466
Query: 132 CYCKELMTEKAEALLEKMKELNLGF-SSMPFNS----------LMTLYAKTGHPEKIPAI 180
C + A + + M++ + +S PFN L+ G + +
Sbjct: 467 GLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEEL 526
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
+EM ++PD+ TYN + L + + A ++ + M G + D TF+ L + Y
Sbjct: 527 YEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKG-FSPDVVTFTTLINGYC 585
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTA 298
+ G E+ R + Y+ LI + Q GN++ I++ + +P+T
Sbjct: 586 KVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTI 645
Query: 299 NISYLNMIQVLVNLKDLPGAEKCF 322
I NM+ L + ++L A +C
Sbjct: 646 TIR--NMLTGLWSKEELKRAVQCL 667
>gi|224065693|ref|XP_002301924.1| predicted protein [Populus trichocarpa]
gi|222843650|gb|EEE81197.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 131/295 (44%), Gaps = 15/295 (5%)
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
TE+AEA+ E+M++ L + +N+L+ Y K G ++ EM+ S ++P+ TY++
Sbjct: 322 TEEAEAIFEEMRDNGLQPRTRAYNALLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYSL 381
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
+ A A V++EM+ V + FS + + Y + G ++K + L+E+E+
Sbjct: 382 LIDAYGNAERWESARIVLKEMEA-SNVQPNAYVFSRILASYRDKGEWQKTFQVLREMEDS 440
Query: 259 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 318
D Y LI +G+ L + + I++ ++ A
Sbjct: 441 GVRPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRA 500
Query: 319 EKCFKE-WESG---CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 374
E+ F+E E G C T N+MI ++ + R ++ + L R +G PNA T+
Sbjct: 501 EELFEEMMEKGYLPCNT----TFNIMINSFGDQERWDDVKNLLTNMRSQGLLPNAVTYTT 556
Query: 375 FSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 429
D Y ++G A++CL D + G K PSS + + Q D A
Sbjct: 557 LIDIYGKSGRFDDAIECL----DDMKAAGLK--PSSTMYNALLNAYAQRGLSDQA 605
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 119/291 (40%), Gaps = 7/291 (2%)
Query: 169 AKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAAD 228
G E+ AI +EM+ + + P + YN +R + AE V+ EM+R G V +
Sbjct: 317 GNCGRTEEAEAIFEEMRDNGLQPRTRAYNALLRGYVKAGLLRDAEFVVSEMERSG-VLPN 375
Query: 229 WTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWR 288
T+S L Y A +E A LKE+E N + + ++ Y G + +++ R
Sbjct: 376 EQTYSLLIDAYGNAERWESARIVLKEMEASNVQPNAYVFSRILASYRDKGEWQKTFQVLR 435
Query: 289 SLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEG 348
+ + I Y +I L A F S D N ++ + K G
Sbjct: 436 EMEDSGVRPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWNTLVDCHCKAG 495
Query: 349 RLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVP 408
+ + AEEL E +G P T+ I + + GD + D ++ + R G +P
Sbjct: 496 KHDRAEELFEEMMEKGYLPCNTTFNIMINSF---GDQE-RWDDVKNLLTNMRSQG--LLP 549
Query: 409 SSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
++ T T + + + D A L+ +K A ++ L+ YA G
Sbjct: 550 NAVTYTTLIDIYGKSGRFDDAIECLDDMKAAGLKPSSTMYNALLNAYAQRG 600
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 107/249 (42%), Gaps = 5/249 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N TY L++ Y E A +L++M+ N+ ++ F+ ++ Y G +K ++
Sbjct: 375 NEQTYSLLIDAYGNAERWESARIVLKEMEASNVQPNAYVFSRILASYRDKGEWQKTFQVL 434
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+EM+ S + PD YNV + N + A + M +G + D T++ L + +
Sbjct: 435 REMEDSGVRPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSEG-IEPDTITWNTLVDCHCK 493
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTAN 299
AG ++AE +E+ + + + +I +G +V + ++R PN
Sbjct: 494 AGKHDRAEELFEEMMEKGYLPCNTTFNIMINSFGDQERWDDVKNLLTNMRSQGLLPNA-- 551
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
++Y +I + A +C + ++ + N ++ AYA+ G + A
Sbjct: 552 VTYTTLIDIYGKSGRFDDAIECLDDMKAAGLKPSSTMYNALLNAYAQRGLSDQAVSAFWA 611
Query: 360 ARRRGADPN 368
R G P+
Sbjct: 612 MRDDGLKPS 620
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 106/260 (40%), Gaps = 12/260 (4%)
Query: 127 GSLLNCYCKELMTEK-----AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
G L + K L T A A++ +++ NL FS S+ L G EK+
Sbjct: 132 GPLWHSLLKSLCTSSSSIPLAYAVVSWLQKHNLCFSYELLYSI--LIHALGQSEKLYEAF 189
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+ ++ P TYN + A A NDI A +I M+ DG +D +S + ++
Sbjct: 190 LLSQKQNLTP--LTYNALISACARNNDIEKALNLICRMREDG-YPSDLVNYSLIIRSLMK 246
Query: 242 AGLFEKA--ERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
+ ++ +E++ D+ + +I + + G+L + ++ + +
Sbjct: 247 NNRANSSILQKIYREIDRDKLEVDVQLWNDIIVGFAKAGDLDKALEFLGVVQGSGLSVKT 306
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+ + +I L N AE F+E R N ++ Y K G L +AE +
Sbjct: 307 ATLVTVIWGLGNCGRTEEAEAIFEEMRDNGLQPRTRAYNALLRGYVKAGLLRDAEFVVSE 366
Query: 360 ARRRGADPNAKTWEIFSDYY 379
R G PN +T+ + D Y
Sbjct: 367 MERSGVLPNEQTYSLLIDAY 386
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 2/149 (1%)
Query: 77 LSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYC 134
L NM +G+ +D+ K D A D+ + Y +LLN Y
Sbjct: 538 LLTNMRSQGLLPNAVTYTTLIDIYGKSGRFDDAIECLDDMKAAGLKPSSTMYNALLNAYA 597
Query: 135 KELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSY 194
+ ++++A + M++ L S + NSL+ + K + ++Q MK + + PD
Sbjct: 598 QRGLSDQAVSAFWAMRDDGLKPSLLALNSLINAFGKDRRDVEAFVVLQYMKENDLKPDVV 657
Query: 195 TYNVWMRALAAVNDISGAERVIEEMKRDG 223
TY M+AL V V EEM G
Sbjct: 658 TYTTLMKALILVEKFDKVPSVYEEMILSG 686
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 148/387 (38%), Gaps = 44/387 (11%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
AL L M+++G V + +D + K +D A ++ E + +TY +L++
Sbjct: 318 ALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALID 377
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
YCKE M + A +L+ M+ + G ++ +N L+ K K A++ +M + P
Sbjct: 378 GYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSP 437
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
TYN + VND+ A R++ M +G V W T+S + G E+A
Sbjct: 438 SLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQW-TYSVFIDTLCKEGRVEEAGTL 496
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTAN---------- 299
++ + + Y LI Y + G + Y + + PN+
Sbjct: 497 FDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCK 556
Query: 300 -----------------------ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 336
++Y +I ++ A K F S D+
Sbjct: 557 EKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCT 616
Query: 337 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 396
+ AY +G LE +++ + G P+ T+ + D Y R G A D L+ +
Sbjct: 617 YTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMV 676
Query: 397 DTGRGDGGKWVPSSETIRTFMRHFEQE 423
DTG PS + +++ E
Sbjct: 677 DTG------CKPSLYIVSILIKNLSHE 697
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 140/334 (41%), Gaps = 13/334 (3%)
Query: 104 QGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPF 161
+G+D A F+ +P+ +N ++Y +L++ C+ +A L M E N + +
Sbjct: 243 KGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTY 302
Query: 162 NSLMTLYAKTGHPEKIPA--IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM 219
L +YA +G K+ A + EMK P+ +TY V + L N + A +++ EM
Sbjct: 303 TVL--IYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEM 360
Query: 220 KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGN 279
G + + T++ L Y + G+ + A L +E+ + + Y LI +
Sbjct: 361 SEKGLIPS-VVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRK 419
Query: 280 LSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
+ + + + + + I+Y ++I + DL A + D +V
Sbjct: 420 VHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSV 479
Query: 340 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
I KEGR+E A L + + +G N + D Y + G + +A LE+ ++
Sbjct: 480 FIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDA 539
Query: 400 RGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 433
+P+S T + +EK + A +
Sbjct: 540 ------CLPNSYTYNVLIEGLCKEKKMKEASSLV 567
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 130/308 (42%), Gaps = 15/308 (4%)
Query: 97 LDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNL 154
+D KV ID A + + + N TY L+ CKE ++A +L+ KM + +
Sbjct: 516 IDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGV 575
Query: 155 GFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAER 214
+ + + L+ K G + + M + PD TY ++ A + + +
Sbjct: 576 KPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDD 635
Query: 215 VIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLY 274
VI +M +G + D T++ L Y GL +A LK + + L LI
Sbjct: 636 VIAKMNEEG-ILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIK-- 692
Query: 275 GQTGNLSEVYRI--WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF-KEWESGCAT 331
NLS R+ RS + + +N++ +++ V L + A K F K E GC T
Sbjct: 693 ----NLSHENRMKETRS-EIGIDSVSNVNSVDIADVWKTL-EYEIALKLFEKMVEHGC-T 745
Query: 332 YDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDC 391
D+ + +I + ++ RLE A+ L + RG P+ + D + G AV
Sbjct: 746 IDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRL 805
Query: 392 LEKAIDTG 399
++ ++ G
Sbjct: 806 VDAMVENG 813
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 99/252 (39%), Gaps = 12/252 (4%)
Query: 130 LNCYCKELMTEKAEALLEKMKELNLGF-------SSMPFNSLMTLYAKTGHPEKIPAIIQ 182
L CY LM+ L+++MK + L + FN+++ Y K G+ +
Sbjct: 159 LRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYAS 218
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
++ + + PD++TY + + A V M + G + +++NL EA
Sbjct: 219 KIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKG-CQRNEVSYTNLIHGLCEA 277
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTANI 300
G +A + ++ N + Y LI +G E ++ ++ PN
Sbjct: 278 GRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVH-- 335
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
+Y +I L + A K E + N +I Y KEG +++A E+ +
Sbjct: 336 TYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLM 395
Query: 361 RRRGADPNAKTW 372
PN +T+
Sbjct: 396 ESNSCGPNTRTY 407
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 109/276 (39%), Gaps = 36/276 (13%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
TY ++NC CK E+A+ +L +M E FN+L+ E+ + ++
Sbjct: 326 FTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQ 385
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
+ + PD YT+N+ + AL V D A R+ EEMK G D T++ L G
Sbjct: 386 VTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSG-CTPDEVTYNTLIDNLCSLG 444
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
KA LKE+E+ R Y +I L + RI
Sbjct: 445 KLGKALDLLKEMESAGCPRSTVTYNTIID------GLCKKMRIEE--------------- 483
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
AE+ F + + + + N +I K+ R+++A +L +
Sbjct: 484 --------------AEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISE 529
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
G PN T+ +Y + GD+K A D L+ G
Sbjct: 530 GLQPNNITYNSILTHYCKQGDIKKAADILQTMTANG 565
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/399 (21%), Positives = 163/399 (40%), Gaps = 43/399 (10%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
+ + T+ +L+ + +E + A + +M E+ + + N L+ Y K G E
Sbjct: 216 VAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDAL 275
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
IQ+ A+ PD TYN ++ L + A +V++ M ++G D T++ + +
Sbjct: 276 GYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGH-DPDVFTYNIVVNC 334
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLI-------------------TLYG---- 275
+ G E+A+ L ++ R D++ + LI TL G
Sbjct: 335 LCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPD 394
Query: 276 ------------QTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 323
+ G+ R++ ++ + ++Y +I L +L L A K
Sbjct: 395 VYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 454
Query: 324 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
E ES N +I K+ R+E AEE+ ++ +G NA T+ D ++
Sbjct: 455 EMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDK 514
Query: 384 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDL 443
+ A + + I G P++ T + + H+ ++ D+ A L+ + ++
Sbjct: 515 RIDDANQLISQMISEG------LQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEV 568
Query: 444 GVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKK 482
V + LI AGRT V L+ L+ +++ A+ K
Sbjct: 569 DVVTYGTLINGLCKAGRTQ-VALKLLRGMRIKGMRATPK 606
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 114/298 (38%), Gaps = 3/298 (1%)
Query: 103 VQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFN 162
V +D N L + + Y LLN + + E + +M E + + FN
Sbjct: 130 VDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFN 189
Query: 163 SLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRD 222
+LM + +++EM +S + PD T+ M+ I A RV M
Sbjct: 190 TLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEM 249
Query: 223 GRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 282
G + T + L + Y + G E A +++ D Y + Q G++
Sbjct: 250 G-CSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGH 308
Query: 283 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMI 341
++ + + +Y ++ L L A+ + E GC DI N +I
Sbjct: 309 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLP-DITTFNTLI 367
Query: 342 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
A RLE A +L + +G P+ T+ I + + GD +LA+ E+ +G
Sbjct: 368 VALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSG 425
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 2/152 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
AL L + ME G ++ +D + K I+ AE F +DL S+N +T+ +L++
Sbjct: 449 ALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLID 508
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK+ + A L+ +M L +++ +NS++T Y K G +K I+Q M A+
Sbjct: 509 GLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEV 568
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
D TY + L A +++ M+ G
Sbjct: 569 DVVTYGTLINGLCKAGRTQVALKLLRGMRIKG 600
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 38/194 (19%), Positives = 80/194 (41%), Gaps = 2/194 (1%)
Query: 79 ENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKE 136
+ M+ +G+++ +D + K + ID A + N++TY S+L YCK+
Sbjct: 489 DQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQ 548
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 196
+KA +L+ M + + +L+ K G + +++ M+ + Y
Sbjct: 549 GDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAY 608
Query: 197 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 256
N +++L N+ A + EM G +T + G +A L E+
Sbjct: 609 NPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMV 668
Query: 257 NRNAHRDLSAYQFL 270
++ + S+++ L
Sbjct: 669 DKGFIPEFSSFRML 682
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 129/276 (46%), Gaps = 1/276 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
TYG+L+N CK + +A+ALL++M L + + + +L+ + + G+ ++ +I+E
Sbjct: 315 FTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKE 374
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M A+ + P+ TY+ +R L + + A ++++M RD D T++ + +
Sbjct: 375 MVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSH-RPDTITYNLIIEGHFRHH 433
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
+ A R L E+EN ++ Y +I Q+G + + + Y
Sbjct: 434 SKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYA 493
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I ++ A + F + D+ N +I +K GR+E + + + + R
Sbjct: 494 PLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQER 553
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
G PN T+ YL+NGD++ A +++ +DTG
Sbjct: 554 GLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTG 589
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 168/391 (42%), Gaps = 32/391 (8%)
Query: 100 VAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFS 157
++KV ++ + YF + E N TY L++ Y K E AE L+++M + L +
Sbjct: 534 LSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPN 593
Query: 158 SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIE 217
+ + L+ Y K+ EK+ + + M +M D+ Y + + L++ ++ A RV+
Sbjct: 594 DVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLS 653
Query: 218 EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQT 277
++++G V D +S+L S + EKA L E+ + ++ Y LI ++
Sbjct: 654 GIEKNGSV-PDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKS 712
Query: 278 GNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 335
G++S ++ S+ + PN ++Y ++I + D+ A + E + T D
Sbjct: 713 GDISYARNVFNSILAKGLVPNC--VTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAF 770
Query: 336 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 395
V +V+ + G LE A L E RG + ++ D + + G M+ + L
Sbjct: 771 VYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLH-- 827
Query: 396 IDTGRGDGGKWVPSSETI----------------RTFMRHFEQEKDVDGAEGFLEILKKA 439
+ GRG VP++ TI T +Q+ A F +
Sbjct: 828 VIMGRG----LVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDM 883
Query: 440 VDD--LGVEVFEPLIRTYAAAGRTSPVMLRR 468
++ + ++V + +IR + G ++ R
Sbjct: 884 INQGKIPLDVVDDMIRDHCKEGNLDKALMLR 914
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 121/275 (44%), Gaps = 1/275 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ YCK + A+ +L +M+E G +++ +N L+ ++G E+
Sbjct: 241 SPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFG 300
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
++M+ ++PD +TY + L + A+ +++EM + + ++NL +
Sbjct: 301 FKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSC-AELKPNVVVYANLIDGF 359
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
+ G ++A + +KE+ + Y L+ + G + + + +
Sbjct: 360 MREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDT 419
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
I+Y +I+ A + E E+ + ++ ++MI + G E A +L E
Sbjct: 420 ITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEE 479
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
+G PNA + Y R G++ LA + +K
Sbjct: 480 MTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDK 514
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 150/362 (41%), Gaps = 31/362 (8%)
Query: 38 SVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHL 97
+ + L+Q + R++ G + L A ++ +EK G +V D ++
Sbjct: 616 TFKSMLDQGVMLDNRIY----GILIHNLSSSGNMEAAFRVLSGIEKNG---SVPDVHVYS 668
Query: 98 DLVAKVQGIDAAENYFVDLPETSK-----NHLTYGSLLNCYCKELMTEKAEALLEKMKEL 152
L++ + E F L E SK N + Y +L++ CK A + +
Sbjct: 669 SLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAK 728
Query: 153 NLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA 212
L + + + SL+ K G + EM A+ I PD++ Y+V ++ D+ A
Sbjct: 729 GLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQA 788
Query: 213 ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLIT 272
+IEEM G A ++F+NL + + G ++ + L + R + + +I+
Sbjct: 789 MFLIEEMFLRGH--ASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIIS 846
Query: 273 LYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY 332
+ G LSEV+ I+ L+ +A + ++ ++N +P
Sbjct: 847 GLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIP---------------- 890
Query: 333 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 392
+ V + MI + KEG L+ A L++ + A ++ D R G + A++ L
Sbjct: 891 -LDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLL 949
Query: 393 EK 394
++
Sbjct: 950 KE 951
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 116/294 (39%), Gaps = 9/294 (3%)
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + I PD YTY+ + A V + A++V+ EM+ G + T++ L + +G
Sbjct: 235 MVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERG-CGLNTVTYNVLIAGLCRSG 293
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
E+A K++E+ D Y LI ++ +E + + A + Y
Sbjct: 294 AVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYA 353
Query: 304 NMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
N+I + + A K KE +G I N++ G K G+++ A L ++ R
Sbjct: 354 NLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRG-LCKMGQMDRASLLLKQMVR 412
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ 422
P+ T+ + + + R+ K A L + + G P+ T + Q
Sbjct: 413 DSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAG------ISPNVYTYSIMIHGLCQ 466
Query: 423 EKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEV 476
+ + A LE + V+ PLI Y G S KM KV V
Sbjct: 467 SGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNV 520
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 119/253 (47%), Gaps = 5/253 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY L++ + E+A+ L E+M+E + + S+++ ++G+ ++ +
Sbjct: 298 NVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLF 357
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EM ++P ++TY + + + A+ ++ EM+ G + + F+ L Y E
Sbjct: 358 DEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKG-IDLNPVIFNTLIDGYCE 416
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTAN 299
+G+ ++A R +E + D+ AY + + + E + S+ R PNT
Sbjct: 417 SGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNT-- 474
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+S+ +I + + A++ F+E E +I NV+I Y+K G ++ A +LK+
Sbjct: 475 MSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDE 534
Query: 360 ARRRGADPNAKTW 372
RG P+ T
Sbjct: 535 LENRGLIPDVYTC 547
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 108/248 (43%), Gaps = 36/248 (14%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TYG+L++ CK E A+ L+ +M+ + + + FN+L+ Y ++G ++ + M
Sbjct: 371 TYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVM 430
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ + D + YN L +N A+ ++ M G V+ + +F+ L IY + G
Sbjct: 431 EKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERG-VSPNTMSFTTLIDIYCKEGN 489
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
F +A+R +E+E + ++ Y LI Y + GN+ E ++
Sbjct: 490 FVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHK------------------- 530
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
LKD E E+ D+ +I +G+++ A +L + +RG
Sbjct: 531 -------LKD---------ELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRG 574
Query: 365 ADPNAKTW 372
PN T+
Sbjct: 575 LVPNVVTY 582
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 92 DQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKE 151
D+A+ L +V + +G+++ + Y S+ + CK ++A+ LL M E
Sbjct: 421 DEALRLQVVMEKKGLES-------------DVFAYNSIASGLCKLNRKDEAKGLLFSMVE 467
Query: 152 LNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISG 211
+ ++M F +L+ +Y K G+ + + +EM+ +P+ TYNV + + ++
Sbjct: 468 RGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKE 527
Query: 212 AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 271
A ++ +E++ G + +T S + ++ G + A + E+ R ++ Y +I
Sbjct: 528 AHKLKDELENRGLIPDVYTCTSLIHGECID-GKVDMALKLFDEMPQRGLVPNVVTYTAMI 586
Query: 272 TLYGQTGNLSEVYRIWRSLR 291
+ + G E ++++ ++
Sbjct: 587 SGLSKDGRSEEAFKLYDEMK 606
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/174 (19%), Positives = 72/174 (41%), Gaps = 6/174 (3%)
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
++Y I+ DL G + E ++ ++I ++ G++E A+ L E
Sbjct: 265 VTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEE 324
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
R +G + + + R+G++K A+ ++ D G +PS+ T +
Sbjct: 325 MREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKG------LIPSAHTYGALIHG 378
Query: 420 FEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEK 473
+ ++ A+ + ++ DL +F LI Y +G + ++ MEK
Sbjct: 379 VCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEK 432
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 118/277 (42%), Gaps = 3/277 (1%)
Query: 101 AKVQGIDAAENYFVDL--PETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSS 158
AK+ D + +F D+ TY +++C CKE E A L E+MK L +
Sbjct: 238 AKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDT 297
Query: 159 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 218
+ +NS++ + K G + +EMK PD TYN + + E
Sbjct: 298 VTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYRE 357
Query: 219 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 278
MK +G + + ++S L + + G+ ++A + ++ + Y LI + G
Sbjct: 358 MKGNG-LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIG 416
Query: 279 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 338
NLS+ +R+ + ++Y +I L + + + AE+ F + ++ ++ N
Sbjct: 417 NLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYN 476
Query: 339 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 375
+I + K ++ A EL + RG P+ + F
Sbjct: 477 ALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTF 513
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 120/303 (39%), Gaps = 13/303 (4%)
Query: 138 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 197
M E+A KMK + + N L+ +AK G + + ++M + P +TYN
Sbjct: 207 MLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYN 266
Query: 198 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 257
+ + + D+ A + EEMK G V D T++++ + + G + +E+++
Sbjct: 267 IMIDCMCKEGDVEAARGLFEEMKFRGLV-PDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD 325
Query: 258 RNAHRDLSAYQFLITLYGQTGNLS---EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 314
D+ Y LI + + G L E YR + L PN +SY ++
Sbjct: 326 MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLK-PNV--VSYSTLVDAFCKEGM 382
Query: 315 LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 374
+ A K + + + +I A K G L +A L + G + N T+
Sbjct: 383 MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTA 442
Query: 375 FSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 434
D MK A + G+ D +P+ + + F + K++D A L
Sbjct: 443 LIDGLCDAERMKEAEELF------GKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLN 496
Query: 435 ILK 437
LK
Sbjct: 497 ELK 499
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/241 (19%), Positives = 98/241 (40%), Gaps = 3/241 (1%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
+N ++ K G E + +EMK ++PD+ TYN + V + EEMK
Sbjct: 265 YNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMK 324
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
D D T++ L + + + G +E++ ++ +Y L+ + + G +
Sbjct: 325 -DMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMM 383
Query: 281 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 340
+ + + +R +Y ++I + +L A + E +++ +
Sbjct: 384 QQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTAL 443
Query: 341 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 400
I R++ AEEL + G PN ++ +++ +M A++ L + GR
Sbjct: 444 IDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL--KGR 501
Query: 401 G 401
G
Sbjct: 502 G 502
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 108/245 (44%), Gaps = 4/245 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY +L++ C ++AE L KM + + +N+L+ + K + ++ ++
Sbjct: 436 NVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELL 495
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
E+K I PD Y ++ L ++ I A+ V+ EMK G + A+ ++ L Y +
Sbjct: 496 NELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG-IKANSLIYTTLMDAYFK 554
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
+G + L E++ + + + LI + +S+ + + F AN +
Sbjct: 555 SGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAA 614
Query: 302 -YLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+ MI L + A F++ + G T++M G + K+G + A L+++
Sbjct: 615 IFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNF-KQGNVLEALALRDK 673
Query: 360 ARRRG 364
G
Sbjct: 674 MAEIG 678
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 37/195 (18%), Positives = 81/195 (41%), Gaps = 6/195 (3%)
Query: 229 WTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWR 288
+ F L S+ ++ G+ E+A + +++ + L+ + + G +V R ++
Sbjct: 192 FGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFK 251
Query: 289 SLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEG 348
+ A +Y MI + D+ A F+E + D N MI + K G
Sbjct: 252 DMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVG 311
Query: 349 RLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVP 408
RL++ E + +P+ T+ + + + G + + ++ + +G+G K P
Sbjct: 312 RLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREM----KGNGLK--P 365
Query: 409 SSETIRTFMRHFEQE 423
+ + T + F +E
Sbjct: 366 NVVSYSTLVDAFCKE 380
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 113/295 (38%), Gaps = 45/295 (15%)
Query: 214 RVIEEMKRDGRVAAD---WT-----------TFSNLASIYVEAGLFEKAERALKELENRN 259
RV+ E+K D ++A W+ ++ +A I A ++ A LKE+
Sbjct: 113 RVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSK 172
Query: 260 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 319
A D + L W + + P L VL++L L A
Sbjct: 173 A--DCDVFDVL----------------WSTRNVCVPGFGVFDAL--FSVLIDLGMLEEAI 212
Query: 320 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 379
+CF + + R N ++ +AK G+ ++ + + GA P T+ I D
Sbjct: 213 QCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCM 272
Query: 380 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 439
+ GD++ A E+ G VP + T + + F + +D F E +K
Sbjct: 273 CKEGDVEAARGLFEEMKFRG------LVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDM 326
Query: 440 VDDLGVEVFEPLIRTYAAAGRTSPVML---RRLKMEKVEVSEAS-KKLLEAICVE 490
+ V + LI + G+ P+ L R +K ++ + S L++A C E
Sbjct: 327 CCEPDVITYNALINCFCKFGKL-PIGLEFYREMKGNGLKPNVVSYSTLVDAFCKE 380
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 74/178 (41%), Gaps = 4/178 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE---TSKNHLTYGSLL 130
L L + M++ + TV + +D + K + + A +YF + N + +++
Sbjct: 561 GLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMI 620
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
+ CK+ E A L E+M + L + SLM K G+ + A+ +M +
Sbjct: 621 DGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMK 680
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
D Y + L+ N + A +EEM +G + S L Y E G ++A
Sbjct: 681 LDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHY-ELGCIDEA 737
>gi|359486048|ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic [Vitis vinifera]
gi|298204537|emb|CBI23812.3| unnamed protein product [Vitis vinifera]
Length = 659
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 129/298 (43%), Gaps = 8/298 (2%)
Query: 124 LTYGSLL-NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQ 182
+TY +LL C + KA L+++M+ L S+ + +L+ + A ++
Sbjct: 206 VTYSTLLAGCMKVKHGYSKALELVQEMERSRLPMDSVIYGTLLAVCASNNRCKEAENYFN 265
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
+MK +P+ + Y+ + A +A D A+ ++++MK G V + + L +YV
Sbjct: 266 QMKDEGHLPNVFHYSSLLNAYSADGDYKKADMLVQDMKSAGLVP-NKVILTTLLKVYVRG 324
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY 302
GLFEK+ L ELE+ D Y L+ ++ + E I+ ++ + Y
Sbjct: 325 GLFEKSRELLAELEDLGYAEDEMPYCLLMDGLAKSRRILEAKSIFEEMKKKQVKSDGYCY 384
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
MI L A++ +++E+ YD+ + N M+ AY + G +E+ ++ +
Sbjct: 385 SIMISAFCRSGLLKEAKQLARDFEATYDKYDLVMLNTMLCAYCRAGEMESVMQMMRKMDE 444
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 420
P+ T+ I Y+ + LA +E + G P E + + H
Sbjct: 445 LAISPDWNTFHILIKYFCKEKLYLLAYRTMEDMHNKGHQ------PEEELCSSLISHL 496
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 102/222 (45%), Gaps = 3/222 (1%)
Query: 71 YYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK--NHLTYGS 128
Y AL+L + ME+ + L + A AENYF + + N Y S
Sbjct: 222 YSKALELVQEMERSRLPMDSVIYGTLLAVCASNNRCKEAENYFNQMKDEGHLPNVFHYSS 281
Query: 129 LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS 188
LLN Y + +KA+ L++ MK L + + +L+ +Y + G EK ++ E++
Sbjct: 282 LLNAYSADGDYKKADMLVQDMKSAGLVPNKVILTTLLKVYVRGGLFEKSRELLAELEDLG 341
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
D Y + M LA I A+ + EEMK+ +V +D +S + S + +GL ++A
Sbjct: 342 YAEDEMPYCLLMDGLAKSRRILEAKSIFEEMKKK-QVKSDGYCYSIMISAFCRSGLLKEA 400
Query: 249 ERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
++ ++ E DL ++ Y + G + V ++ R +
Sbjct: 401 KQLARDFEATYDKYDLVMLNTMLCAYCRAGEMESVMQMMRKM 442
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 93/223 (41%), Gaps = 34/223 (15%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N + +LL Y + + EK+ LL ++++L MP+ LM AK+ + +I
Sbjct: 310 NKVILTTLLKVYVRGGLFEKSRELLAELEDLGYAEDEMPYCLLMDGLAKSRRILEAKSIF 369
Query: 182 QEMKASSIMPDSYTYNVWMRA-------------------------LAAVNDISGA---- 212
+EMK + D Y Y++ + A L +N + A
Sbjct: 370 EEMKKKQVKSDGYCYSIMISAFCRSGLLKEAKQLARDFEATYDKYDLVMLNTMLCAYCRA 429
Query: 213 ---ERVIEEMKR--DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAY 267
E V++ M++ + ++ DW TF L + + L+ A R ++++ N+ +
Sbjct: 430 GEMESVMQMMRKMDELAISPDWNTFHILIKYFCKEKLYLLAYRTMEDMHNKGHQPEEELC 489
Query: 268 QFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
LI+ G+ S+ + ++ LR + + ++ +LV
Sbjct: 490 SSLISHLGKIRAHSQAFSVYNMLRYSKRTMCKALHEKILHILV 532
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 44/230 (19%), Positives = 98/230 (42%), Gaps = 6/230 (2%)
Query: 162 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV-NDISGAERVIEEMK 220
NS+++ + G E + +MK + PD+ TY+ + V + S A +++EM+
Sbjct: 174 NSVLSCLIRNGKFENSLKLFHQMKQDGLRPDAVTYSTLLAGCMKVKHGYSKALELVQEME 233
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
R R+ D + L ++ ++AE ++++ ++ Y L+ Y G+
Sbjct: 234 R-SRLPMDSVIYGTLLAVCASNNRCKEAENYFNQMKDEGHLPNVFHYSSLLNAYSADGDY 292
Query: 281 SEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 338
+ + + ++ A PN ++ L ++V V + + E E D
Sbjct: 293 KKADMLVQDMKSAGLVPNKVILTTL--LKVYVRGGLFEKSRELLAELEDLGYAEDEMPYC 350
Query: 339 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 388
+++ AK R+ A+ + E +++ + + I + R+G +K A
Sbjct: 351 LLMDGLAKSRRILEAKSIFEEMKKKQVKSDGYCYSIMISAFCRSGLLKEA 400
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 116/253 (45%), Gaps = 5/253 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N TYG L+N +CK E AE LL M+ +G + + FN+++ Y + G + I
Sbjct: 316 NERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIK 375
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M+ + D YTYN L VN + A+ ++ M G V ++ T++ L SI+ +
Sbjct: 376 AAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMG-VVPNYVTYTTLISIHCK 434
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTAN 299
G +A R +E+ + A + Y +I Y + G++ E R + + + P+
Sbjct: 435 DGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDV-- 492
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+Y +++ + A K F+E + ++ +I AKEGR E A +L +
Sbjct: 493 YTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDD 552
Query: 360 ARRRGADPNAKTW 372
+ G P+ +
Sbjct: 553 MLKAGLIPDDSLY 565
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 134/340 (39%), Gaps = 42/340 (12%)
Query: 94 AIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCK-----------ELM-- 138
++ +D + K +D A D+P S N L Y SLL+CY + E+M
Sbjct: 181 SVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMEN 240
Query: 139 ----------------------TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK 176
K EAL +MK N+ + +++ Y + G+ +
Sbjct: 241 EGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRR 300
Query: 177 IPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLA 236
++ E + + P+ TY V + + + AE ++ +M+ G V + F+ +
Sbjct: 301 AAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQG-VGLNQIIFNTMI 359
Query: 237 SIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAF 294
Y G+ + A + +E D+ Y L + L E + +
Sbjct: 360 DGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVV 419
Query: 295 PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAE 354
PN ++Y +I + D+ A + F+E AT + NVMI Y K+G + AE
Sbjct: 420 PNY--VTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAE 477
Query: 355 ELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
++ ++G P+ T+ + NG + +A+ E+
Sbjct: 478 RFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEE 517
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 121/276 (43%), Gaps = 10/276 (3%)
Query: 159 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 218
+P +L+ + + G K I++ ++ S +PD TYNV + +I+ A V++
Sbjct: 138 IPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDR 197
Query: 219 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 278
M V+ D T++ + ++G ++A L + R+ + D+ Y LI +
Sbjct: 198 MS----VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDS 253
Query: 279 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 338
+ + ++ +R ++Y ++ + L A K + S ++ N
Sbjct: 254 GVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHN 313
Query: 339 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 398
+++ + GR +AE+L R+G P+ T+ I ++ R G + A+D LEK
Sbjct: 314 IILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKH 373
Query: 399 GRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 434
G P+S + + F +EK +D A +LE
Sbjct: 374 G------CQPNSLSYNPLLHGFCKEKKMDRAIEYLE 403
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/311 (20%), Positives = 123/311 (39%), Gaps = 36/311 (11%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY L+ C++ +A LL++M++ + +N L+ K G ++ + +
Sbjct: 240 ITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLND 299
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M +S P+ T+N+ +R++ + AE+++ +M R G + TF+ L + G
Sbjct: 300 MPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG-FSPSVVTFNILINFLCRKG 358
Query: 244 LFEKA--------------------------------ERALKELE---NRNAHRDLSAYQ 268
L +A +RA++ LE +R + D+ Y
Sbjct: 359 LLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYN 418
Query: 269 FLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESG 328
++T + G + + I L + I+Y +I L A K E +
Sbjct: 419 TMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK 478
Query: 329 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 388
D + ++G ++EG+++ A + R G PNA T+ + A
Sbjct: 479 DLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRA 538
Query: 389 VDCLEKAIDTG 399
+D L I+ G
Sbjct: 539 IDFLVYMINRG 549
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/279 (19%), Positives = 124/279 (44%), Gaps = 10/279 (3%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +++ YCK A ++L++M ++ + +N+++ +G ++ ++
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDR 229
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M PD TY + + A + + A ++++EM RD D T++ L + + G
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEM-RDRGCTPDVVTYNVLVNGICKEG 288
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS-LRLAFPNTANISY 302
++A + L ++ + ++ + ++ TG + ++ LR F + ++
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF--SPSVVT 346
Query: 303 LNMIQVLVNLKDLPG--AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
N++ + K L G + K + GC + N ++ + KE +++ A E ER
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSY-NPLLHGFCKEKKMDRAIEYLERM 405
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
RG P+ T+ ++G ++ AV+ L + G
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 3/185 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A KL +M ++G + +V I ++ + + + A + +P+ N L+Y LL+
Sbjct: 328 AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLH 387
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+CKE ++A LE+M + +N+++T K G E I+ ++ + P
Sbjct: 388 GFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP 447
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
TYN + LA A ++++EM R + D T+S+L G ++A +
Sbjct: 448 VLITYNTVIDGLAKAGKTGKAIKLLDEM-RAKDLKPDTITYSSLVGGLSREGKVDEAIKF 506
Query: 252 LKELE 256
E E
Sbjct: 507 FHEFE 511
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 68/148 (45%), Gaps = 1/148 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY ++L CK+ E A +L ++ + +N+++ AK G K ++ E
Sbjct: 415 VTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDE 474
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+A + PD+ TY+ + L+ + A + E +R G V + TF+++ +
Sbjct: 475 MRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG-VRPNAVTFNSIMLGLCKTR 533
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLI 271
++A L + NR ++Y LI
Sbjct: 534 QTDRAIDFLVYMINRGCKPTETSYTILI 561
>gi|357515141|ref|XP_003627859.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355521881|gb|AET02335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 731
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 89/400 (22%), Positives = 162/400 (40%), Gaps = 61/400 (15%)
Query: 115 DLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP 174
D PE + + L++ ++ Y K MT A + E+M NL LM K G
Sbjct: 124 DDPEVNSHVLSW--IVIHYAKSKMTHDAVQVFEQMSLCNLKPHLHACTVLMNSLLKDGIT 181
Query: 175 EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSN 234
+ + + M ++P+ Y YN + A + D+ AE ++ EM+ G V D T++
Sbjct: 182 SMVWKVYKRMVQDGVVPNIYVYNCLIHACSKSRDVERAEFILNEMEVKG-VVPDIFTYNT 240
Query: 235 LASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF 294
L ++Y + GL +A ++E + D+ +Y LI + + G + E R++ ++ A
Sbjct: 241 LIALYCKKGLHYEALSVQDKMEREGINLDIVSYNSLIYGFCKEGKMREAMRMFGEIKDAI 300
Query: 295 PNTANISYLNMI----------------QVLVNLKDLPG-------------------AE 319
PN +++Y +I +++V PG A
Sbjct: 301 PN--HVTYTTLIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCSDGRIRDAN 358
Query: 320 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 379
K E D N +I AY K G L +A + K + G PN+ T++ +
Sbjct: 359 KLLHEMSERKVQADSVTCNTLINAYCKIGDLNSALKFKTKMLEAGLTPNSFTYKALIHGF 418
Query: 380 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL-EILKK 438
+ +++ A + L +D G + P+ T + + ++ + D E L K
Sbjct: 419 CKTSELESAKELLFGMLDAG------FSPNYRTYSWIVDSYCKKDNTDAVLALPDEFLSK 472
Query: 439 AVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSE 478
L + ++ LIR R K+E++E +E
Sbjct: 473 GF-CLNISLYRALIR-------------RLCKIERIECAE 498
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 132/326 (40%), Gaps = 18/326 (5%)
Query: 60 DTLKKLRDRK-LYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE 118
+TL L +K L+Y AL + + ME+ G+N + + K + A F ++ +
Sbjct: 239 NTLIALYCKKGLHYEALSVQDKMEREGINLDIVSYNSLIYGFCKEGKMREAMRMFGEIKD 298
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
NH+TY +L++ YCK E+A L E M L + +NS++ G
Sbjct: 299 AIPNHVTYTTLIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCSDGRIRDAN 358
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
++ EM + DS T N + A + D++ A + +M G + T+ L
Sbjct: 359 KLLHEMSERKVQADSVTCNTLINAYCKIGDLNSALKFKTKMLEAGLTPNSF-TYKALIHG 417
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPN-- 296
+ + E A+ L + + + Y +++ Y + N V LA P+
Sbjct: 418 FCKTSELESAKELLFGMLDAGFSPNYRTYSWIVDSYCKKDNTDAV--------LALPDEF 469
Query: 297 -----TANIS-YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRL 350
NIS Y +I+ L ++ + AEK E + D + + +Y K G
Sbjct: 470 LSKGFCLNISLYRALIRRLCKIERIECAEKLLYHMEGKGISGDSVIYTSLAFSYWKSGNT 529
Query: 351 ENAEELKERARRRGADPNAKTWEIFS 376
A ++ E RR K + FS
Sbjct: 530 NAASDMLEEMARRRLMITVKIYRCFS 555
>gi|224083253|ref|XP_002306972.1| predicted protein [Populus trichocarpa]
gi|222856421|gb|EEE93968.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 126/284 (44%), Gaps = 7/284 (2%)
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
T +AEA+ E+M++ L + +N+L+ Y K G + ++ EM+ S + P+ TY+
Sbjct: 321 TVEAEAIFEEMRDNGLKPRTRAYNALLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYSF 380
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
+ A A V++EM+ V + FS + S Y + G ++K+ + L+E+EN
Sbjct: 381 LIDAYGNAGRWESARIVLKEMEA-SNVQPNAYVFSRILSSYRDKGEWQKSFQVLREMENS 439
Query: 259 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 318
D Y +I +G+ L + + +++ +I A
Sbjct: 440 GVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHCRAGKHDRA 499
Query: 319 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 378
E+ F+E G + N+MI ++ + R ++ + L R +G PN+ T+ D
Sbjct: 500 EELFEEMMEGGYSPCNTTFNIMINSFGDQERWDDVKNLLAHMRSQGLVPNSVTYTTLIDI 559
Query: 379 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ 422
Y ++G A++CL D + G K PSS + + Q
Sbjct: 560 YGKSGRFNDAIECL----DDMKAAGLK--PSSTMYNALINAYAQ 597
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 118/281 (41%), Gaps = 7/281 (2%)
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
AI +EM+ + + P + YN +R + AE V+ EM+R G V+ + T+S L
Sbjct: 326 AIFEEMRDNGLKPRTRAYNALLRGYVKAGLLKDAEFVVSEMERSG-VSPNEQTYSFLIDA 384
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
Y AG +E A LKE+E N + + +++ Y G + +++ R + +
Sbjct: 385 YGNAGRWESARIVLKEMEASNVQPNAYVFSRILSSYRDKGEWQKSFQVLREMENSGVRPD 444
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+ Y MI L A F S D N +I + + G+ + AEEL E
Sbjct: 445 RVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHCRAGKHDRAEELFE 504
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 418
G P T+ I + + GD + D ++ + R G VP+S T T +
Sbjct: 505 EMMEGGYSPCNTTFNIMINSF---GDQE-RWDDVKNLLAHMRSQG--LVPNSVTYTTLID 558
Query: 419 HFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
+ + + A L+ +K A ++ LI YA G
Sbjct: 559 IYGKSGRFNDAIECLDDMKAAGLKPSSTMYNALINAYAQRG 599
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 141/352 (40%), Gaps = 28/352 (7%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
S N TY L++ Y E A +L++M+ N+ ++ F+ +++ Y G +K
Sbjct: 371 VSPNEQTYSFLIDAYGNAGRWESARIVLKEMEASNVQPNAYVFSRILSSYRDKGEWQKSF 430
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+++EM+ S + PD YNV + N + A + M +G + D T++ L
Sbjct: 431 QVLREMENSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEG-IEPDTVTWNTLIDC 489
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPN 296
+ AG ++AE +E+ + + +I +G +V + +R PN
Sbjct: 490 HCRAGKHDRAEELFEEMMEGGYSPCNTTFNIMINSFGDQERWDDVKNLLAHMRSQGLVPN 549
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
+ ++Y +I + A +C + ++ + N +I AYA+ G E A
Sbjct: 550 S--VTYTTLIDIYGKSGRFNDAIECLDDMKAAGLKPSSTMYNALINAYAQRGLSEQAVSA 607
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTF 416
R G P+ LA++ L A R D + T+ +
Sbjct: 608 FRAMRVDGLKPSL-----------------LALNSLINAFGEDRRDAEAF-----TVLQY 645
Query: 417 MRHFEQEKDVDGAEGFLEILKKAVD-DLGVEVFEPLIRTYAAAGRTSPVMLR 467
M+ + + DV ++ L + D V+E +I + R + MLR
Sbjct: 646 MKENDLKPDVVTYTTLMKALIRVEKFDKVPSVYEEMILSGCTPDRKARAMLR 697
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 86/390 (22%), Positives = 142/390 (36%), Gaps = 76/390 (19%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMK--------------------------------- 150
LTY +L++ + EKA L+ +M+
Sbjct: 199 LTYNALISACARNNDLEKALNLITRMRQDGYPSDFVNYSLIIRSLMRKNRVDSAILQKLY 258
Query: 151 --------ELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 202
EL++ S N ++ +AK G K + ++ S + + T + A
Sbjct: 259 REIECDKLELDVQLS----NDIIVGFAKAGDLSKALEFLGVVQGSGLSVKTATLVAVIWA 314
Query: 203 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 262
L AE + EEM RD + ++ L YV+AGL + AE + E+E
Sbjct: 315 LGNCGRTVEAEAIFEEM-RDNGLKPRTRAYNALLRGYVKAGLLKDAEFVVSEMERSGVSP 373
Query: 263 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF---------PNTANISYLNMIQVLVNLK 313
+ Y FLI YG G W S R+ PN S ++L + +
Sbjct: 374 NEQTYSFLIDAYGNAGR-------WESARIVLKEMEASNVQPNAYVFS-----RILSSYR 421
Query: 314 DLPGAEKCF---KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
D +K F +E E+ D NVMI + K L++A +R G +P+
Sbjct: 422 DKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTV 481
Query: 371 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 430
TW D + R G A + E+ ++ G + P + T + F ++ D +
Sbjct: 482 TWNTLIDCHCRAGKHDRAEELFEEMME------GGYSPCNTTFNIMINSFGDQERWDDVK 535
Query: 431 GFLEILKKAVDDLGVEVFEPLIRTYAAAGR 460
L ++ + LI Y +GR
Sbjct: 536 NLLAHMRSQGLVPNSVTYTTLIDIYGKSGR 565
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 124/322 (38%), Gaps = 37/322 (11%)
Query: 127 GSLLNCYCKELMTEK-----AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
G L + K L T A A++ +++ NL FS S+ L G EK+
Sbjct: 131 GPLWHSLLKSLCTSSSSIGLAYAVVLWLQKHNLCFSYELLYSI--LIHALGQSEKLYEAF 188
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+ ++ P TYN + A A ND+ A +I M++DG +D+ +S + +
Sbjct: 189 LLSQRQNLTP--LTYNALISACARNNDLEKALNLITRMRQDG-YPSDFVNYSLIIRSLMR 245
Query: 242 AGLFEKA--ERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
+ A ++ +E+E D+ +I + + G+LS+ ++ + +
Sbjct: 246 KNRVDSAILQKLYREIECDKLELDVQLSNDIIVGFAKAGDLSKALEFLGVVQGSGLSVKT 305
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+ + +I L N AE F+E R N ++ Y K G L++AE +
Sbjct: 306 ATLVAVIWALGNCGRTVEAEAIFEEMRDNGLKPRTRAYNALLRGYVKAGLLKDAEFVVSE 365
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
R G PN +T+ D Y G+ G+W E+ R ++
Sbjct: 366 MERSGVSPNEQTYSFLIDAY---------------------GNAGRW----ESARIVLKE 400
Query: 420 FEQEKDVDGAEGFLEILKKAVD 441
E A F IL D
Sbjct: 401 MEASNVQPNAYVFSRILSSYRD 422
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/362 (20%), Positives = 146/362 (40%), Gaps = 15/362 (4%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
+ N TY L+ C ++A ++L M+ G + + +N+L+ + + G +
Sbjct: 186 VAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAE 245
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
++ M+ + P+ T+N + + + A +V +EM R+G +A D +++ L
Sbjct: 246 RLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREG-LAPDGVSYNTLVGG 304
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
Y +AG +A E+ + D+ + LI + + GNL + R +R
Sbjct: 305 YCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMN 364
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+++ +I L A + + + N +I Y GR++ A EL
Sbjct: 365 EVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLH 424
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 418
+G P+ T+ Y +N D A + ++ ++ G +P + T + +R
Sbjct: 425 EMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKG------VLPDAITYSSLIR 478
Query: 419 HFEQEKDVDGAEGFLEILKKAVDDLGVE----VFEPLIRTYAAAGRTSPVMLRRLKMEKV 474
EK + A +L K + LG++ + LI + G + KM K
Sbjct: 479 VLCGEKRLSDA----HVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKA 534
Query: 475 EV 476
V
Sbjct: 535 GV 536
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/290 (20%), Positives = 115/290 (39%), Gaps = 38/290 (13%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +T+ S++N CK E A + ++M L + +N+L+ Y K G + ++
Sbjct: 259 NLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVF 318
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG------------------ 223
EM IMPD T+ + + ++ A ++ +M+ G
Sbjct: 319 AEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKK 378
Query: 224 ----------------RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAY 267
R+ ++ L + Y G ++A L E+E + D+ Y
Sbjct: 379 GFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTY 438
Query: 268 QFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 325
+I+ Y + + + + + + + P+ I+Y ++I+VL K L A FK
Sbjct: 439 STIISAYCKNCDTHSAFELNQQMLEKGVLPDA--ITYSSLIRVLCGEKRLSDAHVLFKNM 496
Query: 326 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 375
D +I + KEG +E+A L ++ + G P+ T+ +
Sbjct: 497 IKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVL 546
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 117/263 (44%), Gaps = 18/263 (6%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY SL+ C E A L + M +L L + SL+ + K G+ E ++ +
Sbjct: 471 ITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDK 530
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAAD--------WTTFSNL 235
M + ++PD TY+V + L+ A++++ ++ + + A+ + L
Sbjct: 531 MVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAEL 590
Query: 236 ASI------YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS 289
S+ + GL +A++ + + +RN + D S Y LI + + GN+ + +
Sbjct: 591 KSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQ 650
Query: 290 -LRLAF-PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKE 347
L+ F PN+ S +++I+ L + A++ ++ + C+ D + +I E
Sbjct: 651 MLQGGFAPNST--STISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLNE 708
Query: 348 GRLENAEELKERARRRGADPNAK 370
G ++ ++ + G P+ +
Sbjct: 709 GNVDAVLDVLHGMAKDGLLPSPR 731
>gi|357146655|ref|XP_003574066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g13630-like [Brachypodium distachyon]
Length = 795
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 143/327 (43%), Gaps = 27/327 (8%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY +L++ CK ++A L E++ E + ++ +NSL+ Y G ++P IIQ M
Sbjct: 275 TYSTLIHGLCKIGFLDEAVDLFERVTEEGMKLETVTYNSLINGYRLLGLTREVPKIIQFM 334
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ I PD TY + + D+ ++ ++ G + + T+S L + + GL
Sbjct: 335 RYQGIEPDIVTYTILIAGHCESGDVEEGMKIRNDILDQG-LQLNIVTYSVLLNALFKKGL 393
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS---EVYRIWRSLRLAFPNTANIS 301
+AE L E+ + D+ AY LI Y + G + EV + + P +
Sbjct: 394 VHEAENLLGEIHSIGLDMDIIAYSILIHGYCKLGEIERALEVCDVMCCSQKVVPTS---- 449
Query: 302 YLNMIQVLVNL--KDLPGAEKCFKE-----WESGCATYDIRVTNVMIGAYAKEGRLENAE 354
LN + +LV L K L + + E ++ G D+ + NV+I YAK G + NA
Sbjct: 450 -LNHLSILVGLCKKGLLVEARWYLENVAVKYQPG----DVVLYNVVIDGYAKIGDISNAV 504
Query: 355 ELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIR 414
L ++ G P T Y + GD++ A + +AI +P+ T
Sbjct: 505 GLYDQIVIAGMFPTIVTCNSILYGYCKCGDLQ-AAESYFRAIQI-----SSLLPTMVTYT 558
Query: 415 TFMRHFEQEKDVDGAEGFL-EILKKAV 440
T M + V+ L E+++K +
Sbjct: 559 TLMDALSEAGKVNTMLSILYEMVEKGI 585
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 73/355 (20%), Positives = 147/355 (41%), Gaps = 23/355 (6%)
Query: 13 IAKRSKKHLEEALYDRLFKKGSSDVSVRQQL--NQFLKSKKRVFKWEVGDTLKKLRDR-K 69
+ +R + + AL + ++GS ++ + N F + W D L R +
Sbjct: 93 LQQRRWREMRGALAQMVTEQGSGSAAILCDILRNGFRECDPSSIMW---DALANSYARAQ 149
Query: 70 LYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYG 127
+ + AL + M M +VS + L+ ++ D A F ++ SK+ ++
Sbjct: 150 MIHDALYVLSKMNSLNMQISVST---YDSLLYGLRMTDMALELFEEMEAYGISKSEYSHS 206
Query: 128 SLLNCYCKELMTEKAEALL------EKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+++ CK+ +A + L E+ K L M FN LM+ G + + +
Sbjct: 207 IIIDGLCKQDKVGEALSFLQEARKGERFKPLG-----MSFNVLMSALCNWGFIQPAKSFL 261
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M + PD YTY+ + L + + A + E + +G + + T+++L + Y
Sbjct: 262 CLMLKYGLNPDRYTYSTLIHGLCKIGFLDEAVDLFERVTEEG-MKLETVTYNSLINGYRL 320
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
GL + + ++ + + D+ Y LI + ++G++ E +I + ++
Sbjct: 321 LGLTREVPKIIQFMRYQGIEPDIVTYTILIAGHCESGDVEEGMKIRNDILDQGLQLNIVT 380
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
Y ++ L + AE E S DI +++I Y K G +E A E+
Sbjct: 381 YSVLLNALFKKGLVHEAENLLGEIHSIGLDMDIIAYSILIHGYCKLGEIERALEV 435
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 53/308 (17%), Positives = 120/308 (38%), Gaps = 10/308 (3%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY L+ +C+ E+ + + + L + + ++ L+ K G + ++ E
Sbjct: 344 VTYTILIAGHCESGDVEEGMKIRNDILDQGLQLNIVTYSVLLNALFKKGLVHEAENLLGE 403
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
+ + + D Y++ + + +I A V + M +V ++ + G
Sbjct: 404 IHSIGLDMDIIAYSILIHGYCKLGEIERALEVCDVMCCSQKVVPTSLNHLSILVGLCKKG 463
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANIS 301
L +A L+ + + D+ Y +I Y + G++S ++ + +A FP +
Sbjct: 464 LLVEARWYLENVAVKYQPGDVVLYNVVIDGYAKIGDISNAVGLYDQIVIAGMFPTIVTCN 523
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
+++ DL AE F+ + + ++ A ++ G++ +
Sbjct: 524 --SILYGYCKCGDLQAAESYFRAIQISSLLPTMVTYTTLMDALSEAGKVNTMLSILYEMV 581
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
+G PNA T+ + + A+ L D G+G P T T ++ F
Sbjct: 582 EKGIKPNAITYSVVIKGLCKELRFHDAIHFL----DNMHGEGVNADPV--TYNTLIQGFC 635
Query: 422 QEKDVDGA 429
+ +D+ A
Sbjct: 636 EVQDIQMA 643
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 134/315 (42%), Gaps = 3/315 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A++ ++ E G TV ++ + K+ AA F + E N +TY L++
Sbjct: 184 AVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILID 243
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK+ + +A + MK + +NSL+ ++ A++ EM + +IMP
Sbjct: 244 SLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMP 303
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ +T+NV + A+ +S A+ V + M G V D T+S+L Y +A +
Sbjct: 304 NIFTFNVLVDAICKEGKVSEAQGVFKTMTEMG-VEPDVVTYSSLMYGYSLRMEIVEARKL 362
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
+ + D +Y LI Y + + E +++ + N++Y +I L
Sbjct: 363 FDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQ 422
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
L L A+ FK S D+ ++++ + KEG L A L + P+
Sbjct: 423 LGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAM 482
Query: 372 WEIFSDYYLRNGDMK 386
+ I D + G++K
Sbjct: 483 YNILIDAMCKFGNLK 497
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 104/269 (38%), Gaps = 37/269 (13%)
Query: 114 VDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGH 173
++L S + T L++C+ + A ++ KM +L L ++ FN+L+ K G
Sbjct: 121 MELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGK 180
Query: 174 PEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFS 233
+ + +AS P YTY + L + + + A
Sbjct: 181 FAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAA--------------------- 219
Query: 234 NLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 293
AGLF+K E A ++ Y LI + ++E I+ ++
Sbjct: 220 --------AGLFKKMEEA-------GCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAK 264
Query: 294 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
+ +Y ++IQ L N + A E S +I NV++ A KEG++ A
Sbjct: 265 RISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEA 324
Query: 354 EELKERARRRGADPNAKTW-EIFSDYYLR 381
+ + + G +P+ T+ + Y LR
Sbjct: 325 QGVFKTMTEMGVEPDVVTYSSLMYGYSLR 353
>gi|414888269|tpg|DAA64283.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 616
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 159/364 (43%), Gaps = 22/364 (6%)
Query: 23 EALYDRLFKKGSSDVSVRQQLNQFLKS-KKRVFKWEVGDTLKKLRDRKLYYPALKLSENM 81
E+L DRL S++ R + + L++ + R+ + ++ R + +L+L + M
Sbjct: 75 ESLIDRL-----SNLPPRGSIARCLETARHRLTLQDFAAVYREFSRRGDWQRSLRLFKYM 129
Query: 82 EKRGMNKTVSDQAIHLDLVAKV--QG---IDAAENYFVDLPETSKNHLTYGSLLNCYCKE 136
+++ + D+ IH ++ + QG +D F DLP S+ L+Y SL+ Y +
Sbjct: 130 QRQSWCR--PDEHIHAIVIGVLGRQGPALLDKCLEVFHDLPAESRTALSYTSLIAAYARN 187
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP----EKIPAIIQEMK---ASSI 189
+ E+A ALL++MK + ++ +N+++ A+ P + + + EM+ + S+
Sbjct: 188 ALHEEARALLDQMKATGVAPTAATYNTVLAACARATDPPVPFDMLLGLFAEMRHDASPSV 247
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
PD TYN + A A + +E ++ M G V+ D ++ ++ + AG +A
Sbjct: 248 RPDLTTYNTLLAAAAVRSLADQSEMLLHTMLEAG-VSPDTVSYRHIVDAFASAGNLSRAA 306
Query: 250 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 309
E+ D SAY L+ + + G ++ + R ++ +Y ++ +
Sbjct: 307 ELFSEMAATGHTADASAYLGLMEAHTRVGATADAVAVLRQMQADGCAPTAATYRVLLDLY 366
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
G + F+E + D NV+ + G + EL + G P+
Sbjct: 367 GRQGRFDGVRQLFREMRTAVPP-DTATYNVLFRVFGDGGFFKEVVELFHDMLKTGVQPDM 425
Query: 370 KTWE 373
T E
Sbjct: 426 VTCE 429
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 126/337 (37%), Gaps = 51/337 (15%)
Query: 89 TVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLNCYCKELMTEKAEALL 146
TVS + I +D A + A F ++ T + + Y L+ + + T A A+L
Sbjct: 286 TVSYRHI-VDAFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHTRVGATADAVAVL 344
Query: 147 EKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR----- 201
+M+ ++ + L+ LY + G + + + +EM+ +++ PD+ TYNV R
Sbjct: 345 RQMQADGCAPTAATYRVLLDLYGRQGRFDGVRQLFREMR-TAVPPDTATYNVLFRVFGDG 403
Query: 202 -----------------------------ALAAVNDISG-AERVIEEMKRDGRV-AADWT 230
A + G A V+E M R+G V AD
Sbjct: 404 GFFKEVVELFHDMLKTGVQPDMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTAD-- 461
Query: 231 TFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
++ L A ++E+A A + + L Y L Y + G E I+ +
Sbjct: 462 AYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETYNALAFAYARGGLFQEAEAIFSRM 521
Query: 291 RLAFPNTANI-----SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 345
N A I S+ +I+ L A K + E D R ++ AY
Sbjct: 522 S----NNAGIQKSKDSFDALIEAYCQGSRLDDAVKAYMEMRKSRFNPDERSLEGVLNAYC 577
Query: 346 KEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 382
G ++ ++E E + P+ + + Y RN
Sbjct: 578 IAGVIDESKEQFEELQSSVTMPSVIAYCMMLSLYARN 614
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 85/420 (20%), Positives = 172/420 (40%), Gaps = 24/420 (5%)
Query: 43 LNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAK 102
N+ L+ +E L L K Y+ L LS+ ME RG+ + + I ++ +
Sbjct: 73 FNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQ 132
Query: 103 VQGIDAAENYFVDL------PETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGF 156
+ I A + F + P+T +T+ +L C + ++A +K+ L F
Sbjct: 133 LGLIPFAFSVFAKILKMGYVPDT----ITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHF 188
Query: 157 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
+ + +L+ K G ++Q + + + P+ YN + ++ V ++ A +
Sbjct: 189 DQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLF 248
Query: 217 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 276
EM G ++ D T+S L S + G + A ++ N D+ + L+ + +
Sbjct: 249 SEMVSKG-ISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCK 307
Query: 277 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 336
G + E ++ + ++Y +++ +K++ A+ F G DI+
Sbjct: 308 DGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQS 367
Query: 337 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 396
++MI + K + + A L + R+ P+ T+ D ++G + A+ +++
Sbjct: 368 YSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMH 427
Query: 397 DTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYA 456
D G P+ T + + + VD A L K D G F+P I TY+
Sbjct: 428 DRGVP------PNICTYNSILDALCKTHQVDKAIALLTKFK----DKG---FQPDISTYS 474
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 147/341 (43%), Gaps = 13/341 (3%)
Query: 97 LDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNL 154
+D + KV+ ++ A + F ++ S + +TY +L++ +C + A L KM N+
Sbjct: 232 IDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENI 291
Query: 155 GFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAER 214
FN L+ + K G ++ + M I P+ TYN M V +++ A+
Sbjct: 292 KPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKS 351
Query: 215 VIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLY 274
+ M + G V D ++S + + + + F++A KE+ +N D+ Y LI
Sbjct: 352 IFNTMAQGG-VNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGL 410
Query: 275 GQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY 332
++G +S ++ + R PN +Y +++ L + A +++
Sbjct: 411 SKSGRISYALQLVDQMHDRGVPPNIC--TYNSILDALCKTHQVDKAIALLTKFKDKGFQP 468
Query: 333 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 392
DI +++I + G+LE+A ++ E +G + + + I + G A+ L
Sbjct: 469 DISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALL 528
Query: 393 EKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 433
K D G +P ++T + ++ + D AE L
Sbjct: 529 SKMEDNG------CIPDAKTYEIIILSLFKKDENDMAEKLL 563
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/346 (18%), Positives = 136/346 (39%), Gaps = 11/346 (3%)
Query: 113 FVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTG 172
F+ + N ++Y S + + A +L ++ N + FN ++ K+
Sbjct: 40 FIPYSSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSK 99
Query: 173 HPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTF 232
H + + Q+M+ I P+ N+ + + I A V ++ + G V D TF
Sbjct: 100 HYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYV-PDTITF 158
Query: 233 SNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL-- 290
+ L+ G ++A ++ H D +Y LI + G + + +
Sbjct: 159 TTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDG 218
Query: 291 RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRL 350
L PN + Y +I + +K + A F E S + D+ + +I + G+L
Sbjct: 219 NLVQPNV--VMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKL 276
Query: 351 ENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSS 410
++A +L + P+ T+ I + + ++G MK + D G K P+
Sbjct: 277 KDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEG----KTVFDMMMKQGIK--PNF 330
Query: 411 ETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYA 456
T + M + K+V+ A+ + + + ++ + +I +
Sbjct: 331 VTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFC 376
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 122/249 (48%), Gaps = 1/249 (0%)
Query: 151 ELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDIS 210
E+ + ++++ +N ++ L + G ++ +++ +M+ +PD +Y+V + V +
Sbjct: 245 EVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLG 304
Query: 211 GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 270
+++EE++R G + + T++++ S + G +AE+ L+ ++N+ D Y L
Sbjct: 305 KVLKLMEELQRKG-LKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTL 363
Query: 271 ITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCA 330
I+ +G++GN+S Y+++ ++ ++Y +MI L + A K F E S
Sbjct: 364 ISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGL 423
Query: 331 TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
D +I Y K G ++ A L + +G PN T+ D + G++ +A +
Sbjct: 424 KPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANE 483
Query: 391 CLEKAIDTG 399
L + + G
Sbjct: 484 LLHEMSEKG 492
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 136/342 (39%), Gaps = 43/342 (12%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELM 138
ME RG V ++ +D +V+ + +L N TY S+++ CK
Sbjct: 278 MEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGR 337
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
+AE +L MK + ++ + +L++ + K+G+ + EMK I+PD TY
Sbjct: 338 VVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTS 397
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG-----------LFEK 247
+ L + A ++ EM G + D T++ L Y +AG + EK
Sbjct: 398 MIHGLCQAGKVVEARKLFSEMLSKG-LKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEK 456
Query: 248 ------------------------AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 283
A L E+ + ++ Y LI + GN+ +
Sbjct: 457 GLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQA 516
Query: 284 YRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 341
++ + LA FP+T I+Y ++ + ++ A + + I NV++
Sbjct: 517 VKLMEEMDLAGFFPDT--ITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLM 574
Query: 342 GAYAKEGRLENAEELKERARRRGADPNAKTW-EIFSDYYLRN 382
+ G LE+ E L + +G PNA T+ + Y +RN
Sbjct: 575 NGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRN 616
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 120/290 (41%), Gaps = 5/290 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A L M ++G+ V +D + K +D A ++ E N TY +L+N
Sbjct: 446 AFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALIN 505
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK E+A L+E+M ++ + ++M Y K G K +++ M + P
Sbjct: 506 GLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQP 565
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
T+NV M + ER+I+ M G + + TTF++L Y
Sbjct: 566 TIVTFNVLMNGFCMSGMLEDGERLIKWMLDKG-IMPNATTFNSLMKQYCIRNNMRATIEI 624
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL-RLAFPNTANISYLNMIQVLV 310
K + + D + Y LI + + N+ E + + + + F TA SY ++I+
Sbjct: 625 YKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAA-SYNSLIKGFY 683
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
K A K F+E + + + ++ + +EG EN EL + A
Sbjct: 684 KRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLELCDEA 733
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 119/253 (47%), Gaps = 5/253 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY L++ + E+A+ L E+M+E + + S+++ ++G+ ++ +
Sbjct: 294 NVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLF 353
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EM ++P ++TY + + + A+ ++ EM+ G + + F+ L Y E
Sbjct: 354 DEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKG-IDLNPVIFNTLIDGYCE 412
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTAN 299
+G+ ++A R +E + D+ AY + + + E + S+ R PNT
Sbjct: 413 SGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNT-- 470
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+S+ +I + + A++ F+E E +I NV+I Y+K G ++ A +LK+
Sbjct: 471 MSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDE 530
Query: 360 ARRRGADPNAKTW 372
RG P+ T
Sbjct: 531 LENRGLIPDVYTC 543
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 108/248 (43%), Gaps = 36/248 (14%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TYG+L++ CK E A+ L+ +M+ + + + FN+L+ Y ++G ++ + M
Sbjct: 367 TYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVM 426
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ + D + YN L +N A+ ++ M G V+ + +F+ L IY + G
Sbjct: 427 EKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERG-VSPNTMSFTTLIDIYCKEGN 485
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
F +A+R +E+E + ++ Y LI Y + GN+ E ++
Sbjct: 486 FVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHK------------------- 526
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
LKD E E+ D+ +I +G+++ A +L + +RG
Sbjct: 527 -------LKD---------ELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRG 570
Query: 365 ADPNAKTW 372
PN T+
Sbjct: 571 LVPNVVTY 578
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 92 DQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKE 151
D+A+ L +V + +G+++ + Y S+ + CK ++A+ LL M E
Sbjct: 417 DEALRLQVVMEKKGLES-------------DVFAYNSIASGLCKLNRKDEAKGLLFSMVE 463
Query: 152 LNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISG 211
+ ++M F +L+ +Y K G+ + + +EM+ +P+ TYNV + + ++
Sbjct: 464 RGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKE 523
Query: 212 AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 271
A ++ +E++ G + +T S + ++ G + A + E+ R ++ Y +I
Sbjct: 524 AHKLKDELENRGLIPDVYTCTSLIHGECID-GKVDMALKLFDEMPQRGLVPNVVTYTAMI 582
Query: 272 TLYGQTGNLSEVYRIWRSLR 291
+ + G E ++++ ++
Sbjct: 583 SGLSKDGRSEEAFKLYDEMK 602
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 34/174 (19%), Positives = 72/174 (41%), Gaps = 6/174 (3%)
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
++Y I+ DL G + E ++ ++I ++ G++E A+ L E
Sbjct: 261 VTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEE 320
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
R +G + + + R+G++K A+ ++ D G +PS+ T +
Sbjct: 321 MREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKG------LIPSAHTYGALIHG 374
Query: 420 FEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEK 473
+ ++ A+ + ++ DL +F LI Y +G + ++ MEK
Sbjct: 375 VCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEK 428
>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
Length = 1202
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 154/354 (43%), Gaps = 12/354 (3%)
Query: 25 LYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKR 84
L D L K V++ LN L+S R K+ G ++ L+L M+
Sbjct: 523 LLDHLVKTKQFRVTINVFLN-ILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHD 581
Query: 85 GMNKTVSDQAIHLDLVAKVQGIDAAENYFVD------LPETSKNHLTYGSLLNCYCKELM 138
++ TV + +D + KV+ + AE F + LP +TY +L++ YCK+
Sbjct: 582 RISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSL----ITYNTLIDGYCKDGN 637
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
EK+ + E+MK N+ S + FN+L+ K G E ++ EMK +PD++T+++
Sbjct: 638 PEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSI 697
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
++ ND + A + E D + + T S L + + G EKAE L +
Sbjct: 698 LFDGYSS-NDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAK 756
Query: 259 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 318
+ Y +I Y + G+L ++ +++Y +I+ L D+ A
Sbjct: 757 GLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENA 816
Query: 319 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
E+ + + + + N++IG Y ++ + +L + G PN ++
Sbjct: 817 EQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSY 870
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 147/343 (42%), Gaps = 28/343 (8%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S Y L++ CK + AE L ++M L S + +N+L+ Y K G+PEK
Sbjct: 584 SPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFK 643
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+ + MKA +I P T+N ++ L + AE V+ EMK G V D TFS L Y
Sbjct: 644 VRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFV-PDAFTFSILFDGY 702
Query: 240 VEAGLFEKAERALKELENR-NAHRDLSAYQFLITLY-----GQTGNLSEVYRIWRSLRLA 293
+KA+ AL E ++ ++AY I L GQ E+ + R +
Sbjct: 703 SSN---DKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEI--LGREMAKG 757
Query: 294 F-PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLEN 352
PN + Y MI DL GA E D N +I + + G +EN
Sbjct: 758 LVPN--EVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMEN 815
Query: 353 AEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSET 412
AE+ + + +G P+ +T+ I Y R + D L++ D G +P+ +
Sbjct: 816 AEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGT------MPNVVS 869
Query: 413 IRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 455
T + + + A +I+K+ ++D GV P +R Y
Sbjct: 870 YGTLINCLCKGSKLLEA----QIVKRDMEDRGV---SPNVRIY 905
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCY 133
+ L E M+ G+ T+ + + L K +GI+ + F ++ + L Y +L+CY
Sbjct: 991 CIALYEEMKTSGIKPTLKTYHLLISLCTK-EGIELTKKIFGEM-SLQPDLLVYNGVLHCY 1048
Query: 134 CKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDS 193
+KA L ++M E ++G +NSL+ K G ++ ++I EMKA + P++
Sbjct: 1049 AVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEA 1108
Query: 194 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 253
TY++ ++ + D GA EM+ G + D L S E ++AE +
Sbjct: 1109 DTYDIIVKGHCEMKDYMGAYVWYREMQEKG-LLLDVCIGDELVSGLKEEWRSKEAENVIS 1167
Query: 254 ELENRN-----AHRDLSA 266
E+ R DLSA
Sbjct: 1168 EMNGRKLGDVIVDEDLSA 1185
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 110/257 (42%), Gaps = 5/257 (1%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
T N ++YG+L+NC CK +A+ + M++ + + +N L+ G E
Sbjct: 863 TMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAF 922
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+EM I + TYN + L+ ++ AE ++ E+ R G + D T+++L S
Sbjct: 923 RFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKG-LKPDVFTYNSLISG 981
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
Y AG ++ +E++ L Y LI+L + G + +I+ + L P+
Sbjct: 982 YRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLISLCTKEG-IELTKKIFGEMSLQ-PDL- 1038
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+ Y ++ D+ A K+ D N +I K G+L L +
Sbjct: 1039 -LVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLID 1097
Query: 359 RARRRGADPNAKTWEIF 375
+ R +P A T++I
Sbjct: 1098 EMKAREMEPEADTYDII 1114
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 120/311 (38%), Gaps = 47/311 (15%)
Query: 98 DLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFS 157
DLV IDA E + +HL Y L+ +C+ E AE + KMK + S
Sbjct: 777 DLVGARMKIDAMEKQGM-----KPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPS 831
Query: 158 SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPD--SY--------------------- 194
+N L+ Y + +K +++EM+ + MP+ SY
Sbjct: 832 VETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKR 891
Query: 195 ------------TYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
YN+ + + I A R EEM + G + + T++ L
Sbjct: 892 DMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKG-IELNLVTYNTLIDGLSMN 950
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI-S 301
G +AE L E+ + D+ Y LI+ Y GN+ ++ ++ T+ I
Sbjct: 951 GKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMK-----TSGIKP 1005
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
L +L++L G E K + D+ V N ++ YA G ++ A L+++
Sbjct: 1006 TLKTYHLLISLCTKEGIELTKKIFGEMSLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMI 1065
Query: 362 RRGADPNAKTW 372
+ + T+
Sbjct: 1066 EKSIGLDKTTY 1076
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/358 (20%), Positives = 154/358 (43%), Gaps = 50/358 (13%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI---PAI 180
+++ ++N CK KA ++E MK + + + +N+L+ Y K G K+ AI
Sbjct: 164 ISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAI 223
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
++EM+A I P+ T+N+ + ++S A +V EM R G V + T+++L +
Sbjct: 224 LKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQG-VKPNVVTYNSLINGLC 282
Query: 241 EAG-----------------------------------LFEKAERALKELENRNAHRDLS 265
G + ++A ++ + +++
Sbjct: 283 NNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVT 342
Query: 266 AYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 323
Y LI Y + N+ + + ++R + + P+ + +Y +I L DL A
Sbjct: 343 TYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVS--TYNCLIAGLCRKGDLEAARNLVS 400
Query: 324 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
E ++ D+ N++I + +G ++ A L + R+G P+ T+ D Y + G
Sbjct: 401 EMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEG 460
Query: 384 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL-EILKKAV 440
+++ A++ + GR + + T ++ F ++ ++ A G L E+L+K +
Sbjct: 461 NLRAALNLRSQMEKVGR------LANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGL 512
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 122/291 (41%), Gaps = 3/291 (1%)
Query: 95 IHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKEL 152
I +D K + + AA F ++ N +TY SL+N C +A AL ++M
Sbjct: 241 ILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNS 300
Query: 153 NLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA 212
L + + N+L+ + K ++ + +M I P+ TYN+ + A ++ A
Sbjct: 301 CLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDA 360
Query: 213 ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLIT 272
+ M G V D +T++ L + G E A + E++ ++ DL Y LI
Sbjct: 361 FALYRIMLGKG-VCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILID 419
Query: 273 LYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY 332
G + + R+ + + ++Y MI +L A + E
Sbjct: 420 SLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLA 479
Query: 333 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
++ NV+I + K+ +LE+A L +G PN T+EI ++ + G
Sbjct: 480 NVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKG 530
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 112/259 (43%), Gaps = 4/259 (1%)
Query: 133 YCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPD 192
Y K L T ++ + L S N LM+ K G + + +EM I P
Sbjct: 103 YAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPT 162
Query: 193 SYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK---AE 249
++N+ + L V ++ A +IE+MK G V+A+ T++ L Y + G K A+
Sbjct: 163 LISFNIVINGLCKVGKLNKAGDIIEDMKVRG-VSANVITYNTLIDGYCKMGKIGKMYKAD 221
Query: 250 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 309
LKE+ + + LI + + N+S +++ + ++Y ++I L
Sbjct: 222 AILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGL 281
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
N + A + + C +I N ++ + K ++ A EL + ++G PN
Sbjct: 282 CNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNV 341
Query: 370 KTWEIFSDYYLRNGDMKLA 388
T+ I D Y ++ +M+ A
Sbjct: 342 TTYNILIDAYCKDENMEDA 360
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 127/282 (45%), Gaps = 19/282 (6%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N T ++N CK+ EK L +++E + + +N+L++ Y+ G E+ ++
Sbjct: 234 NVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELM 293
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M P YTYN + L A+ V EM R G ++ D TT+ +L +
Sbjct: 294 NAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG-LSPDSTTYRSLLMEACK 352
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G + E+ ++ +R+ DL + +++L+ ++GNL + + S++ A N+
Sbjct: 353 KGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVI 412
Query: 302 YL---------NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLEN 352
Y MI V +NL++ + + GCA D+ N ++ K L
Sbjct: 413 YTILIQGYCRKGMISVAMNLRN--------EMLQQGCAM-DVVTYNTILHGLCKRKMLGE 463
Query: 353 AEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
A++L R P++ T I D + + G+++ A++ +K
Sbjct: 464 ADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQK 505
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/347 (18%), Positives = 137/347 (39%), Gaps = 45/347 (12%)
Query: 97 LDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNL 154
+ L + +D A YF + E +++ Y L+ YC++ M A L +M +
Sbjct: 382 MSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGC 441
Query: 155 GFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAER 214
+ +N+++ K + + EM ++ PDSYT + + + ++ A
Sbjct: 442 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAME 501
Query: 215 VIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLY 274
+ ++MK + R+ D T++ L + + G + A+ ++ ++ +Y L+
Sbjct: 502 LFQKMK-EKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNAL 560
Query: 275 GQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDI 334
G+L+E +R+W + + N+K +
Sbjct: 561 CSKGHLAEAFRVWDEM-----------------ISKNIKP------------------TV 585
Query: 335 RVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
+ N MI Y + G + E E+ G P+ ++ ++R +M A ++K
Sbjct: 586 MICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKK 645
Query: 395 AIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVD 441
+ + G VP T + + F ++ + AE +L+K ++
Sbjct: 646 MEE----EQGGLVPDVFTYNSILHGFCRQNQMKEAE---VVLRKMIE 685
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 107/251 (42%), Gaps = 3/251 (1%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY ++L+ CK M +A+ L +M E L S L+ + K G+ + + Q+
Sbjct: 446 VTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQK 505
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
MK I D TYN + V DI A+ + +M + ++S L + G
Sbjct: 506 MKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSK-EILPTPISYSILVNALCSKG 564
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
+A R E+ ++N + +I Y ++GN S+ + ISY
Sbjct: 565 HLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYN 624
Query: 304 NMIQVLVNLKDLPGAEKCFK--EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
+I V +++ A K E E G D+ N ++ + ++ +++ AE + +
Sbjct: 625 TLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI 684
Query: 362 RRGADPNAKTW 372
RG +P+ T+
Sbjct: 685 ERGVNPDRSTY 695
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/238 (18%), Positives = 95/238 (39%), Gaps = 1/238 (0%)
Query: 162 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 221
N+L+ + G E + QE+ S + + YT N+ + AL + + +++
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 222 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 281
G V D T++ L S Y GL E+A + + + + Y +I + G
Sbjct: 264 KG-VYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYE 322
Query: 282 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 341
++ + + + + +Y +++ D+ EK F + S D+ + M+
Sbjct: 323 RAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMM 382
Query: 342 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ + G L+ A + G P+ + I Y R G + +A++ + + G
Sbjct: 383 SLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQG 440
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 50/253 (19%), Positives = 96/253 (37%), Gaps = 25/253 (9%)
Query: 207 NDISGAERVIEEMK-RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR------- 258
ND++ +R ++++ + S + I V +G A+ L + R
Sbjct: 90 NDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLE 149
Query: 259 ----------NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN-MIQ 307
N + S + LI Y Q L E + + LR + T +I N +I
Sbjct: 150 IVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLR-SKGFTVSIDACNALIG 208
Query: 308 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
LV + + A ++E ++ N+M+ A K+G++E + + +G P
Sbjct: 209 SLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYP 268
Query: 368 NAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVD 427
+ T+ Y G M+ A + + G+G + I +H + E+
Sbjct: 269 DIVTYNTLISAYSSKGLMEEAFELMNAM--PGKGFSPGVYTYNTVINGLCKHGKYER--- 323
Query: 428 GAEGFLEILKKAV 440
E F E+L+ +
Sbjct: 324 AKEVFAEMLRSGL 336
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 145/337 (43%), Gaps = 9/337 (2%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+T+ L++ + + A AL++ M L + +NS++ K +K + +
Sbjct: 193 VTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRT 252
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M S+ PD ++N+ + V ++ A + +EM+ V D +FS L ++ G
Sbjct: 253 MDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHR-YVTPDVVSFSCLIGLFSRRG 311
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN-ISY 302
+ A L+E++ D Y +I + + G++SE R+ R + F + ++Y
Sbjct: 312 EMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRV-RDEMVGFGCLPDVVTY 370
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
++ L L AEK E E T D+ +I Y ++G ENA +L + R
Sbjct: 371 NTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLR 430
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ 422
+ P+ T+ D R GD+ A + + + +P+ T + +
Sbjct: 431 QRLRPDVVTYNSLIDGMCRKGDLAKANELWDDM------HAREILPNHITYSILIDSHCE 484
Query: 423 EKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
+ V+ A GFL+ + K + + + +I+ Y +G
Sbjct: 485 KGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSG 521
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 87/424 (20%), Positives = 170/424 (40%), Gaps = 55/424 (12%)
Query: 22 EEALYDRLFKKGSSDVS---VRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLS 78
L D F+ G D + V N+ LK + LK L + + A ++
Sbjct: 195 HNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYN----SVLKGLCKHRRFDKAKEVF 250
Query: 79 ENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKE 136
M++ + V I + +V + A ++ ++ + + +++ L+ + +
Sbjct: 251 RTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRR 310
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 196
+ A A L +MK L L + + ++ + + G + + EM +PD TY
Sbjct: 311 GEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTY 370
Query: 197 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 256
N + L + + AE+++ EM+ G V D TF+ L Y G FE A + L
Sbjct: 371 NTLLNGLCKQHRLLDAEKLLNEMEERG-VTPDLCTFTTLIHGYCRQGNFENALQLFDTLL 429
Query: 257 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKD 314
+ D+ Y LI + G+L++ +W + R PN +I+Y
Sbjct: 430 RQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPN--HITY------------ 475
Query: 315 LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 374
+++I ++ ++G++E+A + ++G PN +T+
Sbjct: 476 -----------------------SILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNS 512
Query: 375 FSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 434
Y R+G++K L+K R D P T T + + +E+++ GA
Sbjct: 513 IIKGYCRSGNVKKGQQFLQKM----RQD--NVFPDLITFNTLIHGYIKEENMHGAFNVFN 566
Query: 435 ILKK 438
I++K
Sbjct: 567 IMEK 570
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 130/289 (44%), Gaps = 9/289 (3%)
Query: 113 FVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTG 172
F LP+ +TY +LLN CK+ AE LL +M+E + F +L+ Y + G
Sbjct: 361 FGCLPDV----VTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQG 416
Query: 173 HPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTF 232
+ E + + + PD TYN + + D++ A + ++M + + T+
Sbjct: 417 NFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAR-EILPNHITY 475
Query: 233 SNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL 292
S L + E G E A L E+ + ++ Y +I Y ++GN+ + + + +R
Sbjct: 476 SILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQ 535
Query: 293 --AFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRL 350
FP+ I++ +I + +++ GA F E D N++I ++++G +
Sbjct: 536 DNVFPDL--ITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNM 593
Query: 351 ENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
++A + + G +P+ T+ + ++ G+ K A ++ I G
Sbjct: 594 QDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRG 642
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/158 (18%), Positives = 69/158 (43%)
Query: 231 TFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
T + + Y + F+ A+ + E+E R D+ + LI + G++ + S+
Sbjct: 159 TLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSM 218
Query: 291 RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRL 350
++Y ++++ L + A++ F+ + D+R N++IG + + G +
Sbjct: 219 ANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEV 278
Query: 351 ENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 388
+ A + + + R P+ ++ + R G+M A
Sbjct: 279 KEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHA 316
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 143/350 (40%), Gaps = 40/350 (11%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
Y L+ + E+A LL +M+E+ F +L+ A+ G A++ E+
Sbjct: 181 AYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEV 240
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
K S + PD YNV + ++ A + E+K G + D +++++ + +AG
Sbjct: 241 KGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQG-LKPDDVSYTSMIWVLCKAGR 299
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+AE ++E + AY +I YG G + Y++ LR + +S+ +
Sbjct: 300 LGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNS 359
Query: 305 MIQVLVNLKDLPGAEKCF----KEWESGCATYDIRV------------------------ 336
++ L + + A F K+ E +TY+I +
Sbjct: 360 ILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASL 419
Query: 337 ------TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
N+M+ K +LE A ++ E A +RG +P+ T+ D + G + A
Sbjct: 420 FPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYR 479
Query: 391 CLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 440
EK +D G V + IR F H +E DG + F E++++
Sbjct: 480 LFEKMLDAGH--NANPVVYTSLIRNFFIHGRKE---DGHKIFKELIRRGC 524
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 139/324 (42%), Gaps = 7/324 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNH--LTYGSLLN 131
A ++ + ME + + I +D + K + ++ A F + N +TY SL++
Sbjct: 407 AYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLID 466
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMP--FNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
K+ ++A L EKM L+ G ++ P + SL+ + G E I +E+
Sbjct: 467 GLGKKGQVDEAYRLFEKM--LDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGC 524
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
PD N +M + ++ + E+++ G + D ++S L +AG +
Sbjct: 525 KPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLP-DVRSYSILIHGLTKAGQARETS 583
Query: 250 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 309
++ + D AY ++ + ++G + + Y I ++ +Y ++ L
Sbjct: 584 NIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGL 643
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
+ L A F+E +S ++ + + +I + K GR++ A + E ++G PN
Sbjct: 644 AKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNV 703
Query: 370 KTWEIFSDYYLRNGDMKLAVDCLE 393
TW D ++ ++ A+ C +
Sbjct: 704 YTWNSLLDALVKAEEINEALVCFQ 727
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 91/230 (39%), Gaps = 1/230 (0%)
Query: 143 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 202
E +LE+M L G + L + + + M+ P Y V + A
Sbjct: 129 EKVLEEMAVLGYGLPNQACAHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGA 188
Query: 203 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 262
LA A ++ +M+ G F+ L G A + E++
Sbjct: 189 LAEARRPERALELLRQMQEVG-YEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEP 247
Query: 263 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 322
D+ Y I +G+ GN+ ++ + L+ ++SY +MI VL L AE+ F
Sbjct: 248 DIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELF 307
Query: 323 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
+ E+ + N MI Y GR E+A +L ER R RG P+ ++
Sbjct: 308 AQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSF 357
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 120/306 (39%), Gaps = 4/306 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF-VDLPETSKNHLTYGSLLNC 132
A KL E + +RG +V L + K + +D A + F V + N TY +++
Sbjct: 338 AYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDM 397
Query: 133 YCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPD 192
C E+A +L++M+ +L + + N ++ K E+ I + PD
Sbjct: 398 LCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPD 457
Query: 193 SYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERAL 252
TY + L + A R+ E+M G A+ +++L + G E +
Sbjct: 458 CVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGH-NANPVVYTSLIRNFFIHGRKEDGHKIF 516
Query: 253 KELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI-SYLNMIQVLVN 311
KEL R DL+ + + G + + I+ +R ++ ++ SY +I L
Sbjct: 517 KELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIR-SYGFLPDVRSYSILIHGLTK 575
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
F + D R N ++ + K G++ A E+ E + + P T
Sbjct: 576 AGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVAT 635
Query: 372 WEIFSD 377
+ D
Sbjct: 636 YGAIVD 641
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 98/223 (43%), Gaps = 3/223 (1%)
Query: 72 YPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSL 129
+ A ++ E M+++ + TV+ +D +AK+ +D A F + N + Y SL
Sbjct: 615 HKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSL 674
Query: 130 LNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
++ + K ++A +LE+M + L + +NSL+ K + Q MK
Sbjct: 675 IDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKC 734
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
P++YTY++ + L V + A ++M++ G V + T++ + S + G A
Sbjct: 735 PPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLV-PNVVTYTTMISGLAKVGNITDAY 793
Query: 250 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL 292
+ + D +++ LI E Y+++ RL
Sbjct: 794 SLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRL 836
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 107/231 (46%), Gaps = 5/231 (2%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TYG++++ K ++A L E+ K + + + ++SL+ + K G ++ I++EM
Sbjct: 635 TYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEM 694
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ P+ YT+N + AL +I+ A + MK + + + T+S L +
Sbjct: 695 MKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMK-EMKCPPNTYTYSILINGLCRVQK 753
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTANISY 302
+ KA ++++ + ++ Y +I+ + GN+++ Y ++ + P+ A S+
Sbjct: 754 YNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAA--SF 811
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
+I+ + N A + F+E +I+ ++ A K LE A
Sbjct: 812 NALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDALNKSECLEQA 862
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 68/147 (46%), Gaps = 2/147 (1%)
Query: 79 ENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKE 136
E M K+G+ V LD + K + I+ A F + E N TY L+N C+
Sbjct: 692 EEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRV 751
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 196
KA + M++ L + + + ++++ AK G+ ++ + KA+ +PD+ ++
Sbjct: 752 QKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASF 811
Query: 197 NVWMRALAAVNDISGAERVIEEMKRDG 223
N + ++ N A +V EE + G
Sbjct: 812 NALIEGMSNANRAMEAYQVFEETRLRG 838
>gi|224141335|ref|XP_002324029.1| predicted protein [Populus trichocarpa]
gi|222867031|gb|EEF04162.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 120/275 (43%), Gaps = 1/275 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY +L+ + K M + + L++M++ + + +++L+ L K K +I +
Sbjct: 144 TYSTLITHFGKAGMFDASLFWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRL 203
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
K S IMPD YN + A+ +++EM+ G V D ++S L S+YVE
Sbjct: 204 KRSGIMPDLVAYNSMINVFGKAKLFREAKLLMKEMREVG-VMPDTVSYSTLLSVYVENEK 262
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
F +A E+ DL+ +I +YGQ E R++ S+R +SY
Sbjct: 263 FVEALSVFAEMNEAKCPLDLTTCNVMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNT 322
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+++V + A F+ + ++ N MI Y K E A L + + RG
Sbjct: 323 LLRVYGETELFGEAIHLFRLMQKKDIEQNVVTYNTMIKVYGKSLEHEKATNLMQEMQNRG 382
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+PNA T+ + + G + A +K +G
Sbjct: 383 IEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSG 417
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 128/308 (41%), Gaps = 19/308 (6%)
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+ EM+ ++ PD YTY+ + + +++M++D RV+ D +SNL +
Sbjct: 128 GLFDEMRNRALAPDRYTYSTLITHFGKAGMFDASLFWLQQMEQD-RVSGDLVLYSNLIEL 186
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
+ + KA L+ DL AY +I ++G+ E + + +R
Sbjct: 187 SRKLCDYSKAISIFMRLKRSGIMPDLVAYNSMINVFGKAKLFREAKLLMKEMREVGVMPD 246
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+SY ++ V V + A F E D+ NVMI Y + + A+ L
Sbjct: 247 TVSYSTLLSVYVENEKFVEALSVFAEMNEAKCPLDLTTCNVMIDVYGQLDMAKEADRLFW 306
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSET-IRTFM 417
R+ G +PN ++ Y G+ +L + + + D + V + T I+ +
Sbjct: 307 SMRKMGIEPNVVSYNTLLRVY---GETELFGEAIHLFRLMQKKDIEQNVVTYNTMIKVYG 363
Query: 418 RHFEQEKDVDGAEGFLEILKKAVDDLGVE----VFEPLIRTYAAAGRT--SPVMLRRLKM 471
+ E EK + L + + + G+E + +I + AG+ + ++ ++L+
Sbjct: 364 KSLEHEKATN--------LMQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRS 415
Query: 472 EKVEVSEA 479
VE+ +
Sbjct: 416 SGVEIDQV 423
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 129/278 (46%), Gaps = 9/278 (3%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+ Y S++N + K + +A+ L+++M+E+ + ++ +++L+++Y + + ++ E
Sbjct: 213 VAYNSMINVFGKAKLFREAKLLMKEMREVGVMPDTVSYSTLLSVYVENEKFVEALSVFAE 272
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + D T NV + ++ A+R+ M++ G + + +++ L +Y E
Sbjct: 273 MNEAKCPLDLTTCNVMIDVYGQLDMAKEADRLFWSMRKMG-IEPNVVSYNTLLRVYGETE 331
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANIS 301
LF +A + ++ ++ +++ Y +I +YG++ + + + + R PN I+
Sbjct: 332 LFGEAIHLFRLMQKKDIEQNVVTYNTMIKVYGKSLEHEKATNLMQEMQNRGIEPNA--IT 389
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I + L A F++ S D + MI AY + G + +A+ L +
Sbjct: 390 YSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERSGLVAHAKRLLHELK 449
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ P +I + R G ++ A +A D G
Sbjct: 450 HPDSIPRETAIKILA----RAGRIEEATWVFRQAFDAG 483
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 121/263 (46%), Gaps = 20/263 (7%)
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
+ +N +TY +++ Y K L EKA L+++M+ + +++ ++++++++ K G ++
Sbjct: 347 DIEQNVVTYNTMIKVYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIISIWGKAGKLDRA 406
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
+ Q++++S + D Y + A ++ A+R++ E+K + +
Sbjct: 407 AMLFQKLRSSGVEIDQVLYQTMIVAYERSGLVAHAKRLLHELKHPDSIPRETAI-----K 461
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FP 295
I AG E+A ++ + +D+S + ++ L+ + + V ++ +R A FP
Sbjct: 462 ILARAGRIEEATWVFRQAFDAGEVKDISVFGCMVDLFSRNRKPANVIEVFEKMRGAGYFP 521
Query: 296 NTANISYLNMIQVLVN----LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLE 351
++ N+I +++N L + A+ +KE + + V M+ Y
Sbjct: 522 DS------NVIALVLNAYGKLHEFEKADALYKEMQEEECVFPDEVHFQMLSLYGARKDFM 575
Query: 352 NAEELKERARRRGADPNAKTWEI 374
E L ER +DPN E+
Sbjct: 576 MIEALFERL---DSDPNINKKEL 595
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 128/278 (46%), Gaps = 1/278 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N TYG ++N C+ +++A LLE+M L ++ + L+ ++K GH +
Sbjct: 454 NAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESL 513
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+ M ++++PD + YN ++ L+ V I AE ++++ G V D T+S L Y +
Sbjct: 514 ENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLV-PDEFTYSGLIHGYCK 572
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
EKA++ L+++ N + Y L+ Y ++ + +V I +S+ + N
Sbjct: 573 TRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHI 632
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I+ L +++ A E E D+ + + +I K +E A L +
Sbjct: 633 YGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMA 692
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ G +P + D + R+GD+ A + + + G
Sbjct: 693 KEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKG 730
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 124/269 (46%), Gaps = 7/269 (2%)
Query: 100 VAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFS 157
++ V I+ AE Y+ + + + TY L++ YCK EKA+ LL++M L +
Sbjct: 535 LSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPN 594
Query: 158 SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIE 217
+ + L+ Y K+ EK+ +I+Q M S PD++ Y + +R L+ ++ A V+
Sbjct: 595 ADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLT 654
Query: 218 EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQT 277
E++++G V D +S+L S + EKA L E+ + Y LI + ++
Sbjct: 655 EVEKNGLV-PDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRS 713
Query: 278 GNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 335
G++S ++ S+ + PN ++Y +I D+ A +K+ D
Sbjct: 714 GDISRARNVFDSILAKGLLPNC--VTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAF 771
Query: 336 VTNVMIGAYAKEGRLENAEELKERARRRG 364
V NV+ + LE A L E RG
Sbjct: 772 VYNVLATGCSDAADLEQALFLTEEMFNRG 800
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/334 (20%), Positives = 139/334 (41%), Gaps = 7/334 (2%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TYG+L+N CK ++A+ALL++M L + + + +L+ + K G +
Sbjct: 312 SPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFD 371
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I+ EM ++ + P+ Y+ +R L + + A +++ EM + G D T+ L +
Sbjct: 372 ILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGH-RPDTFTYHPLMQGH 430
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
+ + A L E+ N + Y +I Q G E + +
Sbjct: 431 FQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNA 490
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
Y +I + A + + D+ N +I + GR+E AEE +
Sbjct: 491 FMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQ 550
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
++RG P+ T+ Y + +++ A L++ +++G P+++T +
Sbjct: 551 VQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSG------LKPNADTYTDLLEG 604
Query: 420 FEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIR 453
+ + D + L+ + + D ++ +IR
Sbjct: 605 YFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIR 638
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/313 (20%), Positives = 128/313 (40%), Gaps = 10/313 (3%)
Query: 83 KRGMNKTVSD--QAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTE 140
+R N + D +A ++LV K++G F++ + TY + L +CK +
Sbjct: 210 RRCCNGLLKDLLRADAMELVWKLKG-------FMEGAGIPPDVYTYSTFLEAHCKARDFD 262
Query: 141 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 200
A+ + E+M+ + + + +N +++ ++G E+ +EM + PD++TY M
Sbjct: 263 AAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALM 322
Query: 201 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 260
L + A+ +++EM G + + ++ L +++ G +A L E+ +
Sbjct: 323 NGLCKGGRLKEAKALLDEMSCSG-LKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGV 381
Query: 261 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 320
+ Y LI + G L ++ + +Y ++Q D GA +
Sbjct: 382 QPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFE 441
Query: 321 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 380
E + + +MI + G + A L E G PNA + +
Sbjct: 442 LLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHS 501
Query: 381 RNGDMKLAVDCLE 393
+ G + LA + LE
Sbjct: 502 KEGHISLACESLE 514
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 117/305 (38%), Gaps = 34/305 (11%)
Query: 129 LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS 188
L++ Y K A ++ M +L L + N L+ + E + + M+ +
Sbjct: 181 LVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGAG 240
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKR--------------------------- 221
I PD YTY+ ++ A D A++V EEM+R
Sbjct: 241 IPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAF 300
Query: 222 -------DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLY 274
D ++ D T+ L + + G ++A+ L E+ ++ Y L+ +
Sbjct: 301 GFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGF 360
Query: 275 GQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDI 334
+ G +E + I + A I Y N+I+ L + L A K E D
Sbjct: 361 MKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDT 420
Query: 335 RVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
+ ++ + + + A EL R G PNA T+ I + +NG+ K A + LE+
Sbjct: 421 FTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEE 480
Query: 395 AIDTG 399
I G
Sbjct: 481 MISEG 485
>gi|302798905|ref|XP_002981212.1| hypothetical protein SELMODRAFT_420695 [Selaginella moellendorffii]
gi|300151266|gb|EFJ17913.1| hypothetical protein SELMODRAFT_420695 [Selaginella moellendorffii]
Length = 414
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 152/368 (41%), Gaps = 38/368 (10%)
Query: 91 SDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMK 150
SD + L+LV ++ A ++ ++P ++ Y ++L + + AE + +MK
Sbjct: 40 SDHVLLLELVGRISKFQATRCFW-EMPAELRSEDAYTAMLQVFARWHAIPAAEDTMSEMK 98
Query: 151 ELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDIS 210
LNL P+N ++ +Y + +K+ A+ E+ + + PD++TY + +RA +
Sbjct: 99 SLNLITRVEPYNIMLDMYKRKNEDDKVRAMYDELSSLGVAPDAHTYLIVLRAKQKIGGFD 158
Query: 211 GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 270
G E A+ F + E + + L Y+ +
Sbjct: 159 GIE-------------AEVRKFLD---------------------EQLTSRQPLFIYECM 184
Query: 271 ITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCA 330
+ +Y +L+ + + L F ++ SY ++ L ++ AE+ F E +
Sbjct: 185 LRIYTLLRDLAAIENLRSILLKTFKKFSSSSYNCLLDSYRQLGEVERAERLFNEIGNKF- 243
Query: 331 TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
T +I+ MI YA GR+E A EL ++ R G + + + Y+ D A+
Sbjct: 244 TLNIQSYRAMIAVYASNGRMEKANELYKQLFRAGFECHPAIYHAMVAGYIDARDHSNALI 303
Query: 391 CLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEP 450
KA D R G P T +R ++ D AE + LK+ VEV+
Sbjct: 304 QYGKAWD--RSLLGHPKPLRATTLLVLRVLAEQGDFSRAESIVRDLKRERQGSDVEVYNW 361
Query: 451 LIRTYAAA 458
L++ Y A
Sbjct: 362 LLKAYIKA 369
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 133/310 (42%), Gaps = 3/310 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLN 131
A +L E M +G +I + + K+ I +A ++ + + N +TY +L+
Sbjct: 330 ATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLH 389
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+CK M + ALLE+M L +S +N ++ K G ++ +IQEM++ P
Sbjct: 390 SFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNP 449
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D +YN + L + AE + E + +G V A+ T++ + + G ++ A R
Sbjct: 450 DICSYNTIIYHLCNNEQMEEAEHMFENLLEEG-VVANGITYNTIIHALLRDGRWQDAVRL 508
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
KE+ D+ +Y LI + GN+ + + N+SY +I L
Sbjct: 509 AKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCK 568
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+ + A + K+ + DI N +I K G + A L E+ P+ T
Sbjct: 569 ERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIIT 628
Query: 372 WEIFSDYYLR 381
+ I ++ +
Sbjct: 629 YNILISWHCK 638
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 126/277 (45%), Gaps = 7/277 (2%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TYG LL C+ ++A A+L ++ ELN+ FN+++ G + + +
Sbjct: 281 MTYGFLLQGLCRVRQADEARAMLGRVPELNVVL----FNTVIGGCLAEGKLAEATELYET 336
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M PD++TY++ M L + IS A R++ EM++ G A + T++ + + + G
Sbjct: 337 MGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKG-FAPNVVTYTIVLHSFCKNG 395
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
+++ L+E+ + + Y +I + G + E + + +R N SY
Sbjct: 396 MWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYN 455
Query: 304 NMIQVLVNLKDLPGAEKCFKE-WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+I L N + + AE F+ E G I N +I A ++GR ++A L +
Sbjct: 456 TIIYHLCNNEQMEEAEHMFENLLEEGVVANGI-TYNTIIHALLRDGRWQDAVRLAKEMIL 514
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
G + ++ ++G++ ++ LE+ + G
Sbjct: 515 HGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKG 551
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 59/301 (19%), Positives = 109/301 (36%), Gaps = 23/301 (7%)
Query: 165 MTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGR 224
+ LY + H +++P P ++T+ V RAL + + A ++ M R G
Sbjct: 159 LALYRRMVHRDRVP------------PTTFTFGVAARALCRLGRANEALALLRGMARHGC 206
Query: 225 VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVY 284
V D + + + G +A L E+ D++ + ++ G + E
Sbjct: 207 V-PDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAA 265
Query: 285 RIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAY 344
R+ + ++Y ++Q L ++ A ++ + N +IG
Sbjct: 266 RLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPE----LNVVLFNTVIGGC 321
Query: 345 AKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGG 404
EG+L A EL E +G P+A T+ I + G + AV L + G
Sbjct: 322 LAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKG----- 376
Query: 405 KWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPV 464
+ P+ T + F + D LE + L + + +I GR
Sbjct: 377 -FAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEA 435
Query: 465 M 465
M
Sbjct: 436 M 436
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 52/277 (18%), Positives = 105/277 (37%), Gaps = 11/277 (3%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y ++++ C + +A LL +M + F+ ++ G + ++ M
Sbjct: 213 YQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMM 272
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA-ADWTTFSNLASIYVEAGL 244
MP TY ++ L V A ++ GRV + F+ + + G
Sbjct: 273 TKGCMPGVMTYGFLLQGLCRVRQADEARAML------GRVPELNVVLFNTVIGGCLAEGK 326
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL-RLAF-PNTANISY 302
+A + + + D Y L+ + G +S R+ R + + F PN ++Y
Sbjct: 327 LAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNV--VTY 384
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
++ +E + T + + N MI A K+GR++ A L + R
Sbjct: 385 TIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRS 444
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+G +P+ ++ + N M+ A E ++ G
Sbjct: 445 QGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEG 481
>gi|225445998|ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
[Vitis vinifera]
gi|297735424|emb|CBI17864.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 125/263 (47%), Gaps = 8/263 (3%)
Query: 114 VDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGH 173
+ + E S + + ++L+ Y + E+A + EKM++ L + + +N ++ +Y K G
Sbjct: 200 ISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGR 259
Query: 174 P-EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTF 232
KI ++ EM+++ + D +T + + A + A + +K +G VA + T+
Sbjct: 260 SWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTF-TY 318
Query: 233 SNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL-- 290
++L ++ +AG++ +A LKE+E N DL Y L+ Y + G E ++
Sbjct: 319 NSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIR 378
Query: 291 RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGR 349
+ PN I+Y +I A F++ ESGC ++ N ++G K+ R
Sbjct: 379 KGIMPNA--ITYTTVINAYGKAGKEDKALSFFRQMKESGCVP-NVCTYNAILGMLGKKSR 435
Query: 350 LENAEELKERARRRGADPNAKTW 372
LE ++ R G PN+ TW
Sbjct: 436 LEEMIDMLCDMRSNGCAPNSVTW 458
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 162/385 (42%), Gaps = 28/385 (7%)
Query: 79 ENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKE 136
+ M ++G+ ++ K D A ++F + E+ N TY ++L K+
Sbjct: 374 DTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKK 433
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 196
E+ +L M+ +S+ +N+++ + G + + + +EMK+ P+ T+
Sbjct: 434 SRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTF 493
Query: 197 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 256
N + A ++ EEM + G TT++ L + G +E AE + +++
Sbjct: 494 NALIGAYGRCGSQIDVVKMYEEMIKAGFTPC-VTTYNALLNALARRGDWEAAESVILDMK 552
Query: 257 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLK- 313
++ + ++Y ++ Y + GN + +I + FP+ + L VL N K
Sbjct: 553 SKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTL----VLANFKR 608
Query: 314 -DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
L G E+ F+E+ D+ + N M+ +AK + A E+ R G P+ T+
Sbjct: 609 RALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTY 668
Query: 373 EIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGK--WVPSSETIRTFMRHFEQEKDVDGAE 430
D Y R G+ + L K I + GGK V + I+ F R +
Sbjct: 669 NSLMDMYARGGECWKGEEIL-KGI---QKSGGKPDLVSYNTVIKGFCR-----------Q 713
Query: 431 GFLEILKKAVDDLGVEVFEPLIRTY 455
G ++ + + ++ + P I TY
Sbjct: 714 GLMQEAIRTLSEMTISGIRPCIVTY 738
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 144/325 (44%), Gaps = 12/325 (3%)
Query: 71 YYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNH------L 124
Y A+ + E M K G++ T+ + LD+ K + + N + L + +++
Sbjct: 225 YERAITMFEKMRKTGLSPTLVTYNVMLDVYGK---MGRSWNKILGLLDEMRSNGLEFDEF 281
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
T ++++ +E + ++A ++K + +NSL+ ++ K G + +I++EM
Sbjct: 282 TCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEM 341
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ ++ PD TYN + A I+ M R G + + T++ + + Y +AG
Sbjct: 342 EKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKG-IMPNAITYTTVINAYGKAGK 400
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+KA ++++ ++ Y ++ + G+ L E+ + +R ++++
Sbjct: 401 EDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNT 460
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVT-NVMIGAYAKEGRLENAEELKERARRR 363
M+ + N + F+E +S C R T N +IGAY + G + ++ E +
Sbjct: 461 MLAMCGNKGMHKYVNRVFREMKS-CGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKA 519
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLA 388
G P T+ + R GD + A
Sbjct: 520 GFTPCVTTYNALLNALARRGDWEAA 544
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 111/270 (41%), Gaps = 9/270 (3%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY +LLN + E AE+++ MK + ++ ++ YAK G+ I I +E+
Sbjct: 527 TYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEI 586
Query: 185 KASSIMPDSYTYNVWMRALAAVN----DISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
I P + +R L N + G ER +E + G D F+++ SI+
Sbjct: 587 YNGHIFPSW----ILLRTLVLANFKRRALMGMERAFQEFCKHG-YKPDLVLFNSMLSIFA 641
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
+ ++++A L+ + DL Y L+ +Y + G + I + ++ + +
Sbjct: 642 KNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLV 701
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
SY +I+ + A + E I N + Y+ +G EE+
Sbjct: 702 SYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYM 761
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
+ PN T++I D Y + K A+D
Sbjct: 762 IQHDCRPNELTYKIVVDGYCKGKKYKEAMD 791
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/297 (19%), Positives = 121/297 (40%), Gaps = 4/297 (1%)
Query: 106 IDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNS 163
+D A +F L TY SLL + K + +A ++L++M++ N + +N
Sbjct: 296 LDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNE 355
Query: 164 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
L+ Y + G E+ I M IMP++ TY + A A +MK G
Sbjct: 356 LVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESG 415
Query: 224 RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 283
V + T++ + + + E+ L ++ + + + ++ + G G V
Sbjct: 416 CV-PNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYV 474
Query: 284 YRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGA 343
R++R ++ ++ +I K ++E T + N ++ A
Sbjct: 475 NRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNA 534
Query: 344 YAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 400
A+ G E AE + + +G PN ++ + + Y + G+ + ++ +E+ I G
Sbjct: 535 LARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGR-GIEKIEEEIYNGH 590
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/347 (18%), Positives = 126/347 (36%), Gaps = 38/347 (10%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL M++ G V L ++ K ++ + D+ + N +T+ ++L
Sbjct: 404 ALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLA 463
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ M + + +MK + FN+L+ Y + G + + +EM + P
Sbjct: 464 MCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTP 523
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG-------- 243
TYN + ALA D AE VI +MK G + T++S + + Y + G
Sbjct: 524 CVTTYNALLNALARRGDWEAAESVILDMKSKG-FKPNETSYSLMLNCYAKGGNGRGIEKI 582
Query: 244 --------LFEK-------------------AERALKELENRNAHRDLSAYQFLITLYGQ 276
+F ERA +E DL + +++++ +
Sbjct: 583 EEEIYNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAK 642
Query: 277 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 336
+ + R +R + ++Y +++ + + E+ K + D+
Sbjct: 643 NKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVS 702
Query: 337 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
N +I + ++G ++ A G P T+ F Y G
Sbjct: 703 YNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKG 749
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 94/243 (38%), Gaps = 43/243 (17%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV----NDISGAERVI 216
+ +++ Y++ G E+ + ++M+ + + P TYNV + + N I G ++
Sbjct: 212 WTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILG---LL 268
Query: 217 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 276
+EM+ +G + D T S + S GL ++A + L++ Y L+ ++G+
Sbjct: 269 DEMRSNG-LEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGK 327
Query: 277 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 336
G SE I KE E D+
Sbjct: 328 AGIYSEALSI-----------------------------------LKEMEKNNCPPDLVT 352
Query: 337 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 396
N ++ AY + G E + + R+G PNA T+ + Y + G A+ +
Sbjct: 353 YNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMK 412
Query: 397 DTG 399
++G
Sbjct: 413 ESG 415
>gi|414888267|tpg|DAA64281.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 873
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 159/364 (43%), Gaps = 22/364 (6%)
Query: 23 EALYDRLFKKGSSDVSVRQQLNQFLKS-KKRVFKWEVGDTLKKLRDRKLYYPALKLSENM 81
E+L DRL S++ R + + L++ + R+ + ++ R + +L+L + M
Sbjct: 75 ESLIDRL-----SNLPPRGSIARCLETARHRLTLQDFAAVYREFSRRGDWQRSLRLFKYM 129
Query: 82 EKRGMNKTVSDQAIHLDLVAKV--QG---IDAAENYFVDLPETSKNHLTYGSLLNCYCKE 136
+++ + D+ IH ++ + QG +D F DLP S+ L+Y SL+ Y +
Sbjct: 130 QRQSWCR--PDEHIHAIVIGVLGRQGPALLDKCLEVFHDLPAESRTALSYTSLIAAYARN 187
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP----EKIPAIIQEMK---ASSI 189
+ E+A ALL++MK + ++ +N+++ A+ P + + + EM+ + S+
Sbjct: 188 ALHEEARALLDQMKATGVAPTAATYNTVLAACARATDPPVPFDMLLGLFAEMRHDASPSV 247
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
PD TYN + A A + +E ++ M G V+ D ++ ++ + AG +A
Sbjct: 248 RPDLTTYNTLLAAAAVRSLADQSEMLLHTMLEAG-VSPDTVSYRHIVDAFASAGNLSRAA 306
Query: 250 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 309
E+ D SAY L+ + + G ++ + R ++ +Y ++ +
Sbjct: 307 ELFSEMAATGHTADASAYLGLMEAHTRVGATADAVAVLRQMQADGCAPTAATYRVLLDLY 366
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
G + F+E + D NV+ + G + EL + G P+
Sbjct: 367 GRQGRFDGVRQLFREMRTAVPP-DTATYNVLFRVFGDGGFFKEVVELFHDMLKTGVQPDM 425
Query: 370 KTWE 373
T E
Sbjct: 426 VTCE 429
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 131/349 (37%), Gaps = 51/349 (14%)
Query: 89 TVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLNCYCKELMTEKAEALL 146
TVS + I +D A + A F ++ T + + Y L+ + + T A A+L
Sbjct: 286 TVSYRHI-VDAFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHTRVGATADAVAVL 344
Query: 147 EKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR----- 201
+M+ ++ + L+ LY + G + + + +EM+ +++ PD+ TYNV R
Sbjct: 345 RQMQADGCAPTAATYRVLLDLYGRQGRFDGVRQLFREMR-TAVPPDTATYNVLFRVFGDG 403
Query: 202 -----------------------------ALAAVNDISG-AERVIEEMKRDGRV-AADWT 230
A + G A V+E M R+G V AD
Sbjct: 404 GFFKEVVELFHDMLKTGVQPDMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTAD-- 461
Query: 231 TFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
++ L A ++E+A A + + L Y L Y + G E I+ +
Sbjct: 462 AYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETYNALAFAYARGGLFQEAEAIFSRM 521
Query: 291 RLAFPNTANI-----SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 345
N A I S+ +I+ L A K + E D R ++ AY
Sbjct: 522 S----NNAGIQKSKDSFDALIEAYCQGSRLDDAVKAYMEMRKSRFNPDERSLEGVLNAYC 577
Query: 346 KEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
G ++ ++E E + P+ + + Y RN A D LE+
Sbjct: 578 IAGVIDESKEQFEELQSSVTMPSVIAYCMMLSLYARNDRWTDAYDLLEE 626
Score = 38.1 bits (87), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 106/258 (41%), Gaps = 31/258 (12%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMP----FNSLMTLYAKTGHPEKIPAII 181
Y L+ M E+A M E+ S+P +N+L YA+ G ++ AI
Sbjct: 463 YTGLVEALGHAAMYEEAYVAFNMMTEIG----SLPTLETYNALAFAYARGGLFQEAEAIF 518
Query: 182 QEMKASS-IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
M ++ I +++ + A + + A + EM R R D + + + Y
Sbjct: 519 SRMSNNAGIQKSKDSFDALIEAYCQGSRLDDAVKAYMEM-RKSRFNPDERSLEGVLNAYC 577
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
AG+ ++++ +EL++ + AY +++LY + ++ Y + ++ N A+
Sbjct: 578 IAGVIDESKEQFEELQSSVTMPSVIAYCMMLSLYARNDRWTDAYDLLEEMKT---NRASS 634
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWE-----------SGCATYDIRVTNVMIGAYAKEGR 349
++ QV+ +L + G W+ GC Y R N ++G G+
Sbjct: 635 TH----QVIASL--IKGEYDDSSNWQMVEYVLENSTMEGC-DYSFRFFNALLGVLWWFGQ 687
Query: 350 LENAEELKERARRRGADP 367
A + ++A + G P
Sbjct: 688 KGRAARVLDQAVKFGLFP 705
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 159/373 (42%), Gaps = 19/373 (5%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS----KNHLTYGSL 129
A +L M RG V ++ ++ + KV ID A ++ S N +TY S
Sbjct: 135 ARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSF 194
Query: 130 LNCYCKELMTEKAEALLEKMKELNLGFS--SMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 187
L+ CK+ MT +A L+ +++ +L S ++ F++L+ K G ++ A +M A
Sbjct: 195 LDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDE--ACNDDMIAG 252
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
+P+ TYN + L + + A +IE M G V D T+S L + +A ++
Sbjct: 253 GYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKG-VTPDVITYSVLVDAFCKASRVDE 311
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNM 305
A L + +R ++ + +I ++ E ++I + R+ P+ +++ +
Sbjct: 312 ALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPD--KVTFNIL 369
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
I + A F+E + D+ +I K G++E A ++ + G
Sbjct: 370 IAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGV 429
Query: 366 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKD 425
PN T+ + ++G ++ + LE+ + +G VP S T + + +
Sbjct: 430 PPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSG------CVPESMTYGSLVYALCRASR 483
Query: 426 VDGAEGFLEILKK 438
D A + LK
Sbjct: 484 TDDALQLVSKLKS 496
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 153/363 (42%), Gaps = 26/363 (7%)
Query: 44 NQFLKS-KKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKT-VSDQAIHLDLVA 101
N FL K+ E + ++ LRD L ++ + G+ K +D+A + D++A
Sbjct: 192 NSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNDDMIA 251
Query: 102 KVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPF 161
Y N +TY +L+N CK E+A A++E M + + + +
Sbjct: 252 G--------GYV-------PNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITY 296
Query: 162 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 221
+ L+ + K ++ ++ M + P+ T+N + L +D SG I
Sbjct: 297 SVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCK-SDRSGEAFQIALQVY 355
Query: 222 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 281
+ + D TF+ L + +AG FE+A +E+ +N D+ + LI + G +
Sbjct: 356 NRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVE 415
Query: 282 EVYRIWRSL-RLAFPNTANISYLNMIQVLVNLKDLPGAEKC-FKE--WESGCATYDIRVT 337
I + L P ++Y ++ L + E C F E SGC +
Sbjct: 416 AARDILDLMGNLGVPPNV-VTYNVLVHGLCKSGRI--EEPCEFLEEMVSSGCVPESMTYG 472
Query: 338 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
+ ++ A + R ++A +L + + G DP+ T+ I D ++G + A+ LE+ +
Sbjct: 473 S-LVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVG 531
Query: 398 TGR 400
G
Sbjct: 532 KGH 534
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 79/165 (47%), Gaps = 1/165 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+T+G+L++ CK E A +L+ M L + + + +N L+ K+G E+ ++E
Sbjct: 399 MTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEE 458
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M +S +P+S TY + AL + A +++ ++K G D T++ L ++G
Sbjct: 459 MVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGW-DPDTVTYNILVDGLWKSG 517
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWR 288
E+A L+E+ + D + ++GNL+ + R
Sbjct: 518 KTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLR 562
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 63/314 (20%), Positives = 126/314 (40%), Gaps = 38/314 (12%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A + E+M +G+ V ++ +D K +D A + + N +T+ S+++
Sbjct: 277 AHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIID 336
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK + +A + ++ L + FN L+ K G+ E+ A+ +EM A ++ P
Sbjct: 337 GLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQP 396
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D T+ + L + A +++ M G V + T++ L ++G E+
Sbjct: 397 DVMTFGALIDGLCKAGQVEAARDILDLMGNLG-VPPNVVTYNVLVHGLCKSGRIEEPCEF 455
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
L+E+ + + Y L VY + R+ R + +Q++
Sbjct: 456 LEEMVSSGCVPESMTYGSL------------VYALCRASRTD----------DALQLVSK 493
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
LK W+ TY N+++ K G+ E A + E +G P++ T
Sbjct: 494 LKSF--------GWDPDTVTY-----NILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFT 540
Query: 372 WEIFSDYYLRNGDM 385
+ R+G++
Sbjct: 541 FAACFGGLHRSGNL 554
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 101/257 (39%), Gaps = 5/257 (1%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +++N CK L E++ + + +N+L+ K G E+ +
Sbjct: 82 VTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGG 141
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR-DGRVAADWTTFSNLASIYVEA 242
M + +P+ TY+V + L V I A +I+EM R V + T+++ +
Sbjct: 142 MSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQ 201
Query: 243 GLFEKAERALKELENRN--AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
+ +A ++ L + + D + LI + G E PN +
Sbjct: 202 SMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNDDMIAGGYVPNV--V 259
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
+Y ++ L + A + T D+ +V++ A+ K R++ A EL
Sbjct: 260 TYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGM 319
Query: 361 RRRGADPNAKTWEIFSD 377
RG PN T+ D
Sbjct: 320 ASRGCTPNVVTFNSIID 336
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 46/236 (19%), Positives = 89/236 (37%), Gaps = 38/236 (16%)
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
EM + P TYN + L N++ + EE+ + G D T++ L +A
Sbjct: 71 EMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGH-HPDVVTYNTLIDSLCKA 129
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE----VYRIWRSLRLAFPNTA 298
G E+A R + +R ++ Y LI + G + E + + R PN
Sbjct: 130 GDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNII 189
Query: 299 NI-SYLNMI----------QVLVNLKD---------------LPGAEKCFKEWE------ 326
S+L+ + +++ +L+D + G KC + E
Sbjct: 190 TYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNDDM 249
Query: 327 -SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 381
+G ++ N ++ K ++E A + E +G P+ T+ + D + +
Sbjct: 250 IAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCK 305
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 59/120 (49%), Gaps = 5/120 (4%)
Query: 116 LPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
+PE+ +TYGSL+ C+ T+ A L+ K+K ++ +N L+ K+G E
Sbjct: 465 VPES----MTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTE 520
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
+ +++EM PDS+T+ L +++G ++ + G + D TT S++
Sbjct: 521 QAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGML-PDATTCSSI 579
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 68/187 (36%), Gaps = 43/187 (22%)
Query: 196 YNVWMRALAAVNDISGAERVIE-EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE 254
YN+ +++L + + A + EM RDG VA T++ + + ++ +E
Sbjct: 48 YNIVLQSLCRAGETARALEIFRGEMARDG-VAPTIVTYNTIINGLCKSNELGAGMELFEE 106
Query: 255 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNL 312
L R H D+ Y LI + G+L E R+ + R PN S
Sbjct: 107 LVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYS----------- 155
Query: 313 KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD--PNAK 370
V+I K GR++ A EL + R+ D PN
Sbjct: 156 --------------------------VLINGLCKVGRIDEARELIQEMTRKSCDVLPNII 189
Query: 371 TWEIFSD 377
T+ F D
Sbjct: 190 TYNSFLD 196
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 151/364 (41%), Gaps = 38/364 (10%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL+L + ME++G V +D + K + + A +F ++ + N +TY S+L+
Sbjct: 195 ALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILH 254
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C +A +L ++M N+ +++ F L+ K G + + + M + + P
Sbjct: 255 GFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEP 314
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDG---------------------------- 223
D+YTY+ M + + A+++ + M G
Sbjct: 315 DAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLL 374
Query: 224 ------RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQT 277
+ D T+S L + +AG + A++ KE+ + D Y L+ +
Sbjct: 375 SEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKH 434
Query: 278 GNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVT 337
G+L E +R+ ++++ + Y +IQ + N L A + F +
Sbjct: 435 GHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTY 494
Query: 338 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
VMI KEG A E+ + G PN+ T+ + +LRNGD AV +E+ +
Sbjct: 495 TVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMV- 553
Query: 398 TGRG 401
GRG
Sbjct: 554 -GRG 556
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 77/413 (18%), Positives = 159/413 (38%), Gaps = 17/413 (4%)
Query: 53 VFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENY 112
VF +G +KK K Y + L + M+ + V I ++ + D
Sbjct: 71 VFNKLLGSLVKK----KHYSTVISLCKQMDLSNIRPNVYTLTILINCLCH-SNRDHVHFA 125
Query: 113 FVDLPETSK-----NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTL 167
F L + K H+T+G+LLN C + A L +++ ++ S + + +++
Sbjct: 126 FSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKG 185
Query: 168 YAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAA 227
K GH ++++M+ PD YN + +L + A EM G +
Sbjct: 186 LCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQG-IPP 244
Query: 228 DWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW 287
+ T+S++ + G +A K++ RN + + L+ + G + E R++
Sbjct: 245 NVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVF 304
Query: 288 RSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKE 347
+ +Y ++ + A+K F +RV N++I + K
Sbjct: 305 EMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKS 364
Query: 348 GRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWV 407
RL A+ L R P+ T+ + + G ++A ++ G +
Sbjct: 365 RRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYG------LL 418
Query: 408 PSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 460
P S T + + +D A L+ ++++ + + ++ LI+ G+
Sbjct: 419 PDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGK 471
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 105/260 (40%), Gaps = 50/260 (19%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
Y L+N +CK +A+ LL +M + +L ++ +++LM + + G P+ + +EM
Sbjct: 353 VYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEM 412
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ ++PDS TY++ + L + G
Sbjct: 413 CSYGLLPDSITYSILLDGLC------------------------------------KHGH 436
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
++A R LK ++ + Y LI G L ++ +L + + ++Y
Sbjct: 437 LDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTV 496
Query: 305 MIQVLVNLKDLPGAEKC--FKEW-ESGC----ATYDIRVTNVMIGAYAKEGRLENAEELK 357
MI L LK+ E C F++ +GC TY NV I + + G NA L
Sbjct: 497 MISGL--LKEGLSNEACEMFRKMVVNGCLPNSCTY-----NVAIQGFLRNGDPSNAVRLI 549
Query: 358 ERARRRGADPNAKTWEIFSD 377
E RG ++ T+++ D
Sbjct: 550 EEMVGRGFSADSSTFQMLLD 569
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 121/264 (45%), Gaps = 1/264 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N + Y +L+ + ++ A +L++M+E + + +NSL+ +K ++ + +
Sbjct: 454 NVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFL 513
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EM + PD++TY ++ + + A++ ++EM G V + + L + Y +
Sbjct: 514 LEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECG-VIPNKVLCTGLINEYCK 572
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G +A A + + + D Y L+ + G +++ I+ +R S
Sbjct: 573 KGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFS 632
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I L ++ A F E T ++ + N+++G + + G +E A+EL +
Sbjct: 633 YGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMS 692
Query: 362 RRGADPNAKTWEIFSDYYLRNGDM 385
+G PNA T+ D Y ++GD+
Sbjct: 693 GKGFPPNAVTYCTIIDGYCKSGDL 716
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 151/373 (40%), Gaps = 19/373 (5%)
Query: 94 AIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLNCYCKELMTEKAEALLEKMKE 151
+I +D + K + DAA ++ S + + Y + KE EKA+AL + M
Sbjct: 319 SILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMIT 378
Query: 152 LNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISG 211
+ + + SL+ + + + K ++ E+K +I+ YTY ++ + + D+ G
Sbjct: 379 FGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDG 438
Query: 212 AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 271
A +++EM G + ++ L +++ F A R LKE+ + D Y LI
Sbjct: 439 AYNIVKEMGASG-CRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLI 497
Query: 272 TLYGQTGNLSEVYRIWRSLRLAFPNTA----NISYLNMIQVLVNLKDLPGAEKCFKEW-E 326
+ + E RS L +Y I + + A+K KE E
Sbjct: 498 IGLSKAKKMDEA----RSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLE 553
Query: 327 SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 386
G + T +I Y K+G++ A +G +AKT+ + + ++NG +
Sbjct: 554 CGVIPNKVLCTG-LINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVN 612
Query: 387 LAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVE 446
A E+ RG G P + T + F + ++ A + + +A V
Sbjct: 613 DA----EEIFHEMRGKG--IAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVI 666
Query: 447 VFEPLIRTYAAAG 459
++ L+ + +G
Sbjct: 667 IYNMLLGGFCRSG 679
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/336 (19%), Positives = 133/336 (39%), Gaps = 46/336 (13%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLNCYCKELM 138
M +G+ V +D +K+ + A + F ++ + + N + Y LL +C+
Sbjct: 621 MRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGE 680
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
EKA+ LL++M +++ + +++ Y K+G + + EMK ++PDS+ Y
Sbjct: 681 IEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTT 740
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAA-------DW---------------------- 229
+ +ND+ A + E ++ ++ +W
Sbjct: 741 LVDGCCRLNDVERAITIFETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSF 800
Query: 230 --------TTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 281
T++ + + G E A+ ++ N + Y L+ Y + G S
Sbjct: 801 DKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRS 860
Query: 282 EVYRIWRSLRLAFPNTANISYLNMIQVLV----NLKDLPGAEKCFKE--WESGCATYDIR 335
E++ ++ + A NI Y +I + K L ++ F + + GC I
Sbjct: 861 EMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGC-KLSIS 919
Query: 336 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
++ +AK G +E AE++ E R P++ T
Sbjct: 920 TCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSST 955
>gi|147825385|emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
Length = 821
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 125/263 (47%), Gaps = 8/263 (3%)
Query: 114 VDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGH 173
+ + E S + + ++L+ Y + E+A + EKM++ L + + +N ++ +Y K G
Sbjct: 200 ISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGR 259
Query: 174 P-EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTF 232
KI ++ EM+++ + D +T + + A + A + +K +G VA + T+
Sbjct: 260 SWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTF-TY 318
Query: 233 SNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL-- 290
++L ++ +AG++ +A LKE+E N DL Y L+ Y + G E ++
Sbjct: 319 NSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIR 378
Query: 291 RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGR 349
+ PN I+Y +I A F++ ESGC ++ N ++G K+ R
Sbjct: 379 KGIMPNA--ITYTTVINAYGKAGKEDKALSFFRQMKESGCVP-NVCTYNAILGMLGKKSR 435
Query: 350 LENAEELKERARRRGADPNAKTW 372
LE ++ R G PN+ TW
Sbjct: 436 LEEMIDMLCDMRSNGCAPNSVTW 458
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 162/385 (42%), Gaps = 28/385 (7%)
Query: 79 ENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKE 136
+ M ++G+ ++ K D A ++F + E+ N TY ++L K+
Sbjct: 374 DTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKK 433
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 196
E+ +L M+ +S+ +N+++ + G + + + +EMK+ P+ T+
Sbjct: 434 SRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTF 493
Query: 197 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 256
N + A ++ EEM + G TT++ L + G +E AE + +++
Sbjct: 494 NALIGAYGRCGSQIDVVKMYEEMIKAGFTPC-VTTYNALLNALARRGDWEAAESVILDMK 552
Query: 257 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLK- 313
++ + ++Y ++ Y + GN + +I + FP+ + L VL N K
Sbjct: 553 SKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTL----VLANFKR 608
Query: 314 -DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
L G E+ F+E+ D+ + N M+ +AK + A E+ R G P+ T+
Sbjct: 609 RALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTY 668
Query: 373 EIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGK--WVPSSETIRTFMRHFEQEKDVDGAE 430
D Y R G+ + L K I + GGK V + I+ F R +
Sbjct: 669 NSLMDMYARGGECWKGEEIL-KGI---QKSGGKPDLVSYNTVIKGFCR-----------Q 713
Query: 431 GFLEILKKAVDDLGVEVFEPLIRTY 455
G ++ + + ++ + P I TY
Sbjct: 714 GLMQEAIRTLSEMTISGIRPCIVTY 738
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 144/325 (44%), Gaps = 12/325 (3%)
Query: 71 YYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNH------L 124
Y A+ + E M K G++ T+ + LD+ K + + N + L + +++
Sbjct: 225 YERAITMFEKMRKTGLSPTLVTYNVMLDVYGK---MGRSWNKILGLLDEMRSNGLEFDEF 281
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
T ++++ +E + ++A ++K + +NSL+ ++ K G + +I++EM
Sbjct: 282 TCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEM 341
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ ++ PD TYN + A I+ M R G + + T++ + + Y +AG
Sbjct: 342 EKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKG-IMPNAITYTTVINAYGKAGK 400
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+KA ++++ ++ Y ++ + G+ L E+ + +R ++++
Sbjct: 401 EDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNT 460
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVT-NVMIGAYAKEGRLENAEELKERARRR 363
M+ + N + F+E +S C R T N +IGAY + G + ++ E +
Sbjct: 461 MLAMCGNKGMHKYVNRVFREMKS-CGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKA 519
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLA 388
G P T+ + R GD + A
Sbjct: 520 GFTPCVTTYNALLNALARRGDWEAA 544
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 111/270 (41%), Gaps = 9/270 (3%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY +LLN + E AE+++ MK + ++ ++ YAK G+ I I +E+
Sbjct: 527 TYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEI 586
Query: 185 KASSIMPDSYTYNVWMRALAAVN----DISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
I P + +R L N + G ER +E + G D F+++ SI+
Sbjct: 587 YNGHIFPSW----ILLRTLVLANFKRRALMGMERAFQEFCKHG-YKPDLVLFNSMLSIFA 641
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
+ ++++A L+ + DL Y L+ +Y + G + I + ++ + +
Sbjct: 642 KNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLV 701
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
SY +I+ + A + E I N + Y+ +G EE+
Sbjct: 702 SYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYM 761
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
+ PN T++I D Y + K A+D
Sbjct: 762 IQHDCRPNELTYKIVVDGYCKGKKYKEAMD 791
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/297 (19%), Positives = 121/297 (40%), Gaps = 4/297 (1%)
Query: 106 IDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNS 163
+D A +F L TY SLL + K + +A ++L++M++ N + +N
Sbjct: 296 LDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNE 355
Query: 164 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
L+ Y + G E+ I M IMP++ TY + A A +MK G
Sbjct: 356 LVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESG 415
Query: 224 RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 283
V + T++ + + + E+ L ++ + + + ++ + G G V
Sbjct: 416 CV-PNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYV 474
Query: 284 YRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGA 343
R++R ++ ++ +I K ++E T + N ++ A
Sbjct: 475 NRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNA 534
Query: 344 YAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 400
A+ G E AE + + +G PN ++ + + Y + G+ + ++ +E+ I G
Sbjct: 535 LARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGR-GIEKIEEEIYNGH 590
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/347 (18%), Positives = 126/347 (36%), Gaps = 38/347 (10%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL M++ G V L ++ K ++ + D+ + N +T+ ++L
Sbjct: 404 ALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLA 463
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ M + + +MK + FN+L+ Y + G + + +EM + P
Sbjct: 464 MCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTP 523
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG-------- 243
TYN + ALA D AE VI +MK G + T++S + + Y + G
Sbjct: 524 CVTTYNALLNALARRGDWEAAESVILDMKSKG-FKPNETSYSLMLNCYAKGGNGRGIEKI 582
Query: 244 --------LFEK-------------------AERALKELENRNAHRDLSAYQFLITLYGQ 276
+F ERA +E DL + +++++ +
Sbjct: 583 EEEIYNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAK 642
Query: 277 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 336
+ + R +R + ++Y +++ + + E+ K + D+
Sbjct: 643 NKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVS 702
Query: 337 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
N +I + ++G ++ A G P T+ F Y G
Sbjct: 703 YNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKG 749
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 94/243 (38%), Gaps = 43/243 (17%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV----NDISGAERVI 216
+ +++ Y++ G E+ + ++M+ + + P TYNV + + N I G ++
Sbjct: 212 WTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILG---LL 268
Query: 217 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 276
+EM+ +G + D T S + S GL ++A + L++ Y L+ ++G+
Sbjct: 269 DEMRSNG-LEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGK 327
Query: 277 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 336
G SE I KE E D+
Sbjct: 328 AGIYSEALSI-----------------------------------LKEMEKNNCPPDLVT 352
Query: 337 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 396
N ++ AY + G E + + R+G PNA T+ + Y + G A+ +
Sbjct: 353 YNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMK 412
Query: 397 DTG 399
++G
Sbjct: 413 ESG 415
>gi|410110145|gb|AFV61152.1| pentatricopeptide repeat-containing protein 123, partial [Nashia
inaguensis]
Length = 433
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 123/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 9 SPDRYTYSTLITHFGKEGLFDAAXSWLQKMEQDQVPGDLILYSNLIELSXKLCDYSKAIS 68
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S PD YN + A +I EMK G V + T++S L ++Y
Sbjct: 69 IFSRLKRSGFXPDLVAYNAMINVFGKAKLFREARSLISEMKTAG-VMPNTTSYSTLLTMY 127
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ +R +
Sbjct: 128 VENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPSV 187
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 188 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 247
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 248 MQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 287
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 111/221 (50%), Gaps = 20/221 (9%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 220 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAML 279
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S + D + + A ++ A+R++ E+KR + D T LA
Sbjct: 280 FQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD-TAIHILAG--- 335
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + +D++ ++ +I L Y + N+ EV+ R L FP++
Sbjct: 336 -AGRIEEATYVFRQAIDAGXVKDITVFERMIHLLSKYKKYSNVVEVFDKXRGLGY-FPDS 393
Query: 298 ANISYLNMIQVLVN----LKDLPGAEKCFKEW-ESGCATYD 333
++I +++N L++ A + E E GC D
Sbjct: 394 ------DVIAIVLNAYGKLQEFDKANDVYMEMQEVGCVFSD 428
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 89/207 (42%), Gaps = 8/207 (3%)
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
EM+ ++ PD YTY+ + A +++M++D +V D +SNL + +
Sbjct: 2 EMRQRALSPDRYTYSTLITHFGKEGLFDAAXSWLQKMEQD-QVPGDLILYSNLIELSXKL 60
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANI 300
+ KA L+ DL AY +I ++G+ E + ++ A PNT
Sbjct: 61 CDYSKAISIFSRLKRSGFXPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTT-- 118
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
SY ++ + V K A F E D+ N+MI Y + G + A++L
Sbjct: 119 SYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM 178
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKL 387
R+ G +P+ ++ Y GD +L
Sbjct: 179 RKMGIEPSVVSYNTLLRVY---GDAEL 202
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 168/399 (42%), Gaps = 14/399 (3%)
Query: 30 FKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKT 89
F G D SV +L + K K E+ LK L K + AL+ + K+ ++
Sbjct: 111 FDSGQLD-SVLSELFEPFKDKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQS 169
Query: 90 VSDQ---AIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLNCYCKELMTEKAEA 144
+ D AI + ++ K + +A N F L E S + +Y SL++ + +A
Sbjct: 170 MLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVN 229
Query: 145 LLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEMKASSIMPDSYTYNVWMRAL 203
+ +KM+E + + +N ++ ++ K G P KI +++++MK+ I PD+YTYN +
Sbjct: 230 VFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCC 289
Query: 204 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 263
+ A +V EEMK G + D T++ L +Y ++ ++A + L E+
Sbjct: 290 KRGSLHQEAAQVFEEMKAAG-FSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPS 348
Query: 264 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 323
+ Y LI+ Y + G L E + + +Y ++ + A F+
Sbjct: 349 IVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFE 408
Query: 324 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
E + +I N I Y G+ ++ + G P+ TW + +NG
Sbjct: 409 EMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNG 468
Query: 384 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ 422
M V + K + +VP ET T + + +
Sbjct: 469 -MDSEVSGVFKEMKR-----AGFVPERETFNTLISAYSR 501
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 130/308 (42%), Gaps = 10/308 (3%)
Query: 71 YYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK------NHL 124
Y A+ + + ME+ G T+ + L++ K + N L E K +
Sbjct: 224 YREAVNVFKKMEEDGCKPTLITYNVILNVFGK---MGTPWNKITSLVEKMKSDGIAPDAY 280
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY +L+ C + + ++A + E+MK + + +N+L+ +Y K+ P++ ++ EM
Sbjct: 281 TYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEM 340
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ P TYN + A A + A + +M G D T++ L S + AG
Sbjct: 341 VLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKG-TKPDVFTYTTLLSGFERAGK 399
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
E A +E+ N ++ + I +YG G +E+ +I+ + + + +++
Sbjct: 400 VESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNT 459
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
++ V FKE + + N +I AY++ G E A + R G
Sbjct: 460 LLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAG 519
Query: 365 ADPNAKTW 372
P+ T+
Sbjct: 520 VTPDLSTY 527
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 126/323 (39%), Gaps = 8/323 (2%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
T + TY +LL+ + + E A ++ E+M+ + FN+ + +Y G ++
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMM 439
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
I E+ + PD T+N + S V +EMKR G V + TF+ L S
Sbjct: 440 KIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP-ERETFNTLISA 498
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
Y G FE+A + + + DLS Y ++ + G + ++ +
Sbjct: 499 YSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPN 558
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
++Y +++ N K++ +E SG + ++ +K L AE
Sbjct: 559 ELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFS 618
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 418
+ RG P+ T Y R + A L+ + G + PS T + M
Sbjct: 619 ELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERG------FTPSMATYNSLMY 672
Query: 419 HFEQEKDVDGAEGFL-EILKKAV 440
+ D +E L EIL K +
Sbjct: 673 MHSRSADFGKSEEILREILAKGI 695
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 109/257 (42%), Gaps = 1/257 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY ++L + M E++E +L +M++ + + + SL+ YA + ++ +E+
Sbjct: 526 TYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEV 585
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ I P + + + + + AER E+K G + D TT +++ SIY +
Sbjct: 586 YSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERG-FSPDITTLNSMVSIYGRRQM 644
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
KA L ++ R ++ Y L+ ++ ++ + + I R + ISY
Sbjct: 645 VAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNT 704
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+I + A + F E + D+ N IG+YA + E A + + G
Sbjct: 705 VIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHG 764
Query: 365 ADPNAKTWEIFSDYYLR 381
PN T+ D Y +
Sbjct: 765 CRPNQNTYNSIVDGYCK 781
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 129/329 (39%), Gaps = 14/329 (4%)
Query: 135 KELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSY 194
KE A + ++E + SL++ +A +G + + ++M+ P
Sbjct: 185 KEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLI 244
Query: 195 TYNVWMRALAAV----NDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
TYNV + + N I+ ++E+MK DG +A D T++ L + L ++A +
Sbjct: 245 TYNVILNVFGKMGTPWNKITS---LVEKMKSDG-IAPDAYTYNTLITCCKRGSLHQEAAQ 300
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
+E++ D Y L+ +YG++ E ++ + L + + ++Y ++I
Sbjct: 301 VFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYA 360
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
L A + + D+ ++ + + G++E+A + E R G PN
Sbjct: 361 RDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNIC 420
Query: 371 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 430
T+ F Y G + ++ G P T T + F Q
Sbjct: 421 TFNAFIKMYGNRGKFTEMMKIFDEINVCG------LSPDIVTWNTLLAVFGQNGMDSEVS 474
Query: 431 GFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
G + +K+A E F LI Y+ G
Sbjct: 475 GVFKEMKRAGFVPERETFNTLISAYSRCG 503
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 94/214 (43%), Gaps = 3/214 (1%)
Query: 99 LVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGF 156
+ +K + AE F +L E S + T S+++ Y + M KA +L+ MKE
Sbjct: 603 VCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTP 662
Query: 157 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
S +NSLM +++++ K I++E+ A I PD +YN + A + A R+
Sbjct: 663 SMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIF 722
Query: 217 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 276
EM+ G + D T++ Y +FE+A ++ + + + Y ++ Y +
Sbjct: 723 SEMRNSG-IVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCK 781
Query: 277 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
E LR P+ L +++ +V
Sbjct: 782 LNRKDEAKLFVEDLRNLDPHAPKGEDLRLLERIV 815
>gi|357123530|ref|XP_003563463.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Brachypodium distachyon]
Length = 862
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 162/364 (44%), Gaps = 22/364 (6%)
Query: 23 EALYDRLFKKGSSDVSVRQQLNQFLKS-KKRVFKWEVGDTLKKLRDRKLYYPALKLSENM 81
++L DRL S+++ R + + L++ + R+ + ++ R + +++L + M
Sbjct: 69 DSLIDRL-----SNLAPRGSIARCLETARHRLTLQDFAAVYREFSRRGDWQRSVRLFKYM 123
Query: 82 EKRGMNKTVSDQAIHLDLVAKV--QG---IDAAENYFVDLPETSKNHLTYGSLLNCYCKE 136
+++ + D+ IH ++ + QG +D F DLP S+ L+Y SL+ Y +
Sbjct: 124 QRQSWCR--PDEHIHAIVIGVLGRQGPALLDKCLEVFHDLPADSRTALSYTSLIAAYARN 181
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP----EKIPAIIQEMK---ASSI 189
+ E+A ALL++MK + ++ +N+++ A+ P + + + EM+ + ++
Sbjct: 182 ALHEEARALLDQMKAAGVAPTAATYNTVLAACARATDPPVPFDMLLGLFAEMRHDVSPAV 241
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
PD TYN + A A + AE ++ M G V D ++ ++ + AG +
Sbjct: 242 RPDLTTYNTLLAAAAVRSLNDQAEMLLRAMLEAG-VLPDTASYRHIVDAFARAGDLSRVA 300
Query: 250 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 309
+E+ + D SAY L+ + + G +E + R ++ +Y ++ +
Sbjct: 301 ELFREMADTGHTPDPSAYLGLMEAHTRVGATAEAVAVLRQMQADGCAPTAATYRVLLDLY 360
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
G + F+E + D NV+ + G + EL R G +P+
Sbjct: 361 GRQGRFDGVRELFREMRTAVPP-DTATYNVLFSVFGDGGFFKEVVELFHDMLRTGIEPDM 419
Query: 370 KTWE 373
+T E
Sbjct: 420 ETCE 423
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 67/336 (19%), Positives = 120/336 (35%), Gaps = 40/336 (11%)
Query: 97 LDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNL 154
+D A+ + F ++ +T + + Y L+ + + T +A A+L +M+
Sbjct: 287 VDAFARAGDLSRVAELFREMADTGHTPDPSAYLGLMEAHTRVGATAEAVAVLRQMQADGC 346
Query: 155 GFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAER 214
++ + L+ LY + G + + + +EM+ +++ PD+ TYNV
Sbjct: 347 APTAATYRVLLDLYGRQGRFDGVRELFREMR-TAVPPDTATYNVLFSVFGDGGFFKEVVE 405
Query: 215 VIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLY 274
+ +M R G + D T + + GL E A L + AY L+
Sbjct: 406 LFHDMLRTG-IEPDMETCEGVLVACGQGGLHEDAREVLDYITKEGMVPTAKAYTGLVEAL 464
Query: 275 GQTGNLSEVY---------------RIWRSLRLAFP----------------NTANI--- 300
G E Y + SL F N+A I
Sbjct: 465 GHAAMYEEAYVAFNMMTEIGSLPTIETYNSLANVFAKGGLFQEAESIFSRMTNSAGIQKN 524
Query: 301 --SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
S+ +I+ L A K + E D R ++ AY G ++ ++E E
Sbjct: 525 KDSFDALIEAYCQGAQLDDAVKAYMEMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFE 584
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
+ A P+ + + Y RN A D LE+
Sbjct: 585 EIQSNMAVPSIIAYCMMLSLYARNDRWADAYDLLEE 620
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 54/291 (18%), Positives = 112/291 (38%), Gaps = 11/291 (3%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL-----PETSKNHLTYGS 128
A+ + M+ G T + + LDL + D F ++ P+T+ TY
Sbjct: 334 AVAVLRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRELFREMRTAVPPDTA----TYNV 389
Query: 129 LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS 188
L + + ++ L M + ++ + G E ++ +
Sbjct: 390 LFSVFGDGGFFKEVVELFHDMLRTGIEPDMETCEGVLVACGQGGLHEDAREVLDYITKEG 449
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
++P + Y + AL A M G + T+++LA+++ + GLF++A
Sbjct: 450 MVPTAKAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPT-IETYNSLANVFAKGGLFQEA 508
Query: 249 ERALKELENRNA-HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 307
E + N ++ ++ LI Y Q L + + + +R + N S ++
Sbjct: 509 ESIFSRMTNSAGIQKNKDSFDALIEAYCQGAQLDDAVKAYMEMRKSRFNPDERSLEGVLN 568
Query: 308 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+ +++ F+E +S A I +M+ YA+ R +A +L E
Sbjct: 569 AYCIAGVIDESKEQFEEIQSNMAVPSIIAYCMMLSLYARNDRWADAYDLLE 619
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 81/183 (44%), Gaps = 2/183 (1%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y L+ M E+A M E+ + +NSL ++AK G ++ +I M
Sbjct: 457 YTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTIETYNSLANVFAKGGLFQEAESIFSRMT 516
Query: 186 ASS-IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
S+ I + +++ + A + A + EM R R D + + + Y AG+
Sbjct: 517 NSAGIQKNKDSFDALIEAYCQGAQLDDAVKAYMEM-RKSRFNPDERSLEGVLNAYCIAGV 575
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
++++ +E+++ A + AY +++LY + ++ Y + ++ ++ + +
Sbjct: 576 IDESKEQFEEIQSNMAVPSIIAYCMMLSLYARNDRWADAYDLLEEMKTNRASSTHQVIAS 635
Query: 305 MIQ 307
MIQ
Sbjct: 636 MIQ 638
>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
Length = 844
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 143/342 (41%), Gaps = 18/342 (5%)
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 187
SL+ + K+ +KA L +M E + + NS++ K +K +I+Q+M S
Sbjct: 215 SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 274
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
I PD +TY++ + L + AERV+E+M G + T+++L Y +G++ +
Sbjct: 275 GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAG-TRPNSITYNSLIHGYSISGMWNE 333
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 307
+ R K++ + + I + G +E I+ S+ L P ISY M+
Sbjct: 334 SVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLH 393
Query: 308 VLVNLKD--LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
D L F + + V N++I AYA+ G ++ A + E + +G
Sbjct: 394 GYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGM 453
Query: 366 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSET-----IRTFMRHF 420
P+ T+ R G + A+ +D G VP SE I+ H
Sbjct: 454 IPDTVTFATVISSLCRIGRLDDALHKFNHMVDIG-------VPPSEAVYGCLIQGCCNHG 506
Query: 421 EQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTS 462
E V E E++ K + GV+ F +I GR +
Sbjct: 507 EL---VKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVA 545
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/361 (19%), Positives = 151/361 (41%), Gaps = 42/361 (11%)
Query: 79 ENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLNCYCKE 136
E ME+ + K + +I +L K++ +D AE+ + ++ + + TY +++ CK
Sbjct: 235 EMMEQGVLPKILICNSIIKEL-CKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKS 293
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 196
+KAE +LE+M E +S+ +NSL+ Y+ +G + + ++M + ++P
Sbjct: 294 KAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNC 353
Query: 197 NVWMRALAAVNDISGAERVIEEMKRDGR-------------------------------- 224
N ++ AL + A+ + + M G
Sbjct: 354 NSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLM 413
Query: 225 ----VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
+A + F+ L + Y G+ +KA ++++N+ D + +I+ + G L
Sbjct: 414 LTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRL 473
Query: 281 SE-VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE-WESGCATYDIRVTN 338
+ +++ + + P + + Y +IQ N +L A++ E ++ +
Sbjct: 474 DDALHKFNHMVDIGVPPSEAV-YGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 532
Query: 339 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 398
+I KEGR+ +++ + + G PN T+ + Y G+M+ A L+
Sbjct: 533 SIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 592
Query: 399 G 399
G
Sbjct: 593 G 593
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 96/211 (45%), Gaps = 3/211 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL + +M +G+ T +I L + + + AA+ F ++ E T+ + TYG +L
Sbjct: 617 ALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLG 676
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C+ T++A LLEK+ +N+ F + FN +++ K G ++ + + ++P
Sbjct: 677 GLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVP 736
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ TY++ + L A+ + +++ G A+D +++ + + KA
Sbjct: 737 NIQTYSMMITNLIKEESYEEADNLFISVEKSGH-ASDSRLLNHIVRMLLNKAEVAKASNY 795
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSE 282
L + N + S L +L+ + G E
Sbjct: 796 LSIIGENNLTLEASTISLLASLFSREGKYRE 826
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 93/221 (42%), Gaps = 3/221 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +T+ SL+ YC E+A ALL+ M + + + + +L+ Y K G + +
Sbjct: 562 NVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVF 621
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
++M + P S Y++ + L + A+++ EM G + T L +
Sbjct: 622 RDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGL-CR 680
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI- 300
++A L++L N D+ + +I+ + G E ++ ++ + NI
Sbjct: 681 NNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAIS-TYGLVPNIQ 739
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 341
+Y MI L+ + A+ F E D R+ N ++
Sbjct: 740 TYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIV 780
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 98/266 (36%), Gaps = 48/266 (18%)
Query: 115 DLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP 174
D+P + + S++N CKE + + +++ M + + + FNSLM Y G+
Sbjct: 522 DIPPPGVKY--FSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNM 579
Query: 175 EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSN 234
E+ A++ M + I P+ Y Y + I A V +M G S
Sbjct: 580 EEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKG-----VKPTSV 634
Query: 235 LASIYVEAGLFE-----KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS 289
L SI + GLF+ A++ E+ + Y ++ + E +
Sbjct: 635 LYSIILH-GLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEK 693
Query: 290 LRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGR 349
L +N+K +DI N++I A K GR
Sbjct: 694 L-----------------FAMNVK------------------FDIITFNIVISAMFKVGR 718
Query: 350 LENAEELKERARRRGADPNAKTWEIF 375
+ A+EL + G PN +T+ +
Sbjct: 719 RQEAKELFDAISTYGLVPNIQTYSMM 744
>gi|242042129|ref|XP_002468459.1| hypothetical protein SORBIDRAFT_01g046280 [Sorghum bicolor]
gi|241922313|gb|EER95457.1| hypothetical protein SORBIDRAFT_01g046280 [Sorghum bicolor]
Length = 790
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 132/281 (46%), Gaps = 9/281 (3%)
Query: 107 DAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMT 166
D E Y + LP+ ++TY SL+ + +KA LEKMK + L +P++ +++
Sbjct: 480 DGMERYGI-LPD----YVTYASLIQLLSTAKLPKKAIYYLEKMKVVKLLSDCIPYSVVIS 534
Query: 167 LYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA 226
+AK G + +EM S + PD + Y++ + A A V ++ A MK+DG +
Sbjct: 535 SFAKIGDLRMAEYLFREMVMSGVRPDVFVYSILIDAYAEVGNVQQASAYFGLMKKDG-LC 593
Query: 227 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
+ T +++L +Y + G +A K L++ +A+ L A +I LY + E +
Sbjct: 594 ENVTIYNSLIKLYTKVGYVAEARETYKLLKSLDANAILYASNCMIDLYSDHCMVKEACEV 653
Query: 287 WRSLRLAFPNTAN-ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 345
+ L++ AN S+ M+ + + A + KE ++ + N +I YA
Sbjct: 654 FEGLKVR--GIANEFSHAMMVCMYKKVGRYDVAHRICKEMQALGLLTQLLSYNSVIQMYA 711
Query: 346 KEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 386
GR+E A ++ ++ PN T++ +R+G K
Sbjct: 712 SGGRMEEALKIFKKMLASNTAPNDATFQALKVILVRSGVTK 752
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 108/255 (42%), Gaps = 19/255 (7%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY +L++ Y K EK +M + S + FNS++ ++ K E++ ++++ M
Sbjct: 252 TYNTLIDTYGKAGHLEKVSDTFNQMLREGVAPSVVTFNSMIHVWGKHHRMEQVASLVRMM 311
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ PD+ TYN+ + NDI AE +MK + V D + L Y G+
Sbjct: 312 EEFQCFPDTRTYNILIALYRESNDIDIAEYYYCKMKGENLV-PDVVSCRTLLYGYSIRGM 370
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPN---TANIS 301
KAE LKE++ R D L +Y G L + +R + + +ANI
Sbjct: 371 VTKAEALLKEMDERGFVVDEYTQSALTRMYVNVGMLEQAWRWFDRFHHHMNSECFSANID 430
Query: 302 YLNMIQVLVNLKDLPGAEK----CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
+V AEK C K+ + NVMI AY +L+ A E+
Sbjct: 431 AFGEKGYIVL------AEKAFIYCIKK-----KMLSVSACNVMIKAYGLVEKLDEACEIA 479
Query: 358 ERARRRGADPNAKTW 372
+ R G P+ T+
Sbjct: 480 DGMERYGILPDYVTY 494
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 121/302 (40%), Gaps = 44/302 (14%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+T+ S+++ + K E+ +L+ M+E + +N L+ LY ++ + +
Sbjct: 286 VTFNSMIHVWGKHHRMEQVASLVRMMEEFQCFPDTRTYNILIALYRESNDIDIAEYYYCK 345
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
MK +++PD + + + ++ AE +++EM G V ++T S L +YV G
Sbjct: 346 MKGENLVPDVVSCRTLLYGYSIRGMVTKAEALLKEMDERGFVVDEYTQ-SALTRMYVNVG 404
Query: 244 LFEKAERALKELENR------NAHRD-------------------------LSAYQFLIT 272
+ E+A R + +A+ D +SA +I
Sbjct: 405 MLEQAWRWFDRFHHHMNSECFSANIDAFGEKGYIVLAEKAFIYCIKKKMLSVSACNVMIK 464
Query: 273 LYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE------WE 326
YG L E I + ++Y ++IQ+L K LP + E
Sbjct: 465 AYGLVEKLDEACEIADGMERYGILPDYVTYASLIQLLSTAK-LPKKAIYYLEKMKVVKLL 523
Query: 327 SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 386
S C Y +V+I ++AK G L AE L G P+ + I D Y G+++
Sbjct: 524 SDCIPY-----SVVISSFAKIGDLRMAEYLFREMVMSGVRPDVFVYSILIDAYAEVGNVQ 578
Query: 387 LA 388
A
Sbjct: 579 QA 580
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 79/183 (43%), Gaps = 4/183 (2%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGS--LLNCYCKELM 138
M+K G+ + V+ + L KV + A + L N + Y S +++ Y M
Sbjct: 587 MKKDGLCENVTIYNSLIKLYTKVGYVAEARETYKLLKSLDANAILYASNCMIDLYSDHCM 646
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
++A + E +K + + ++ +Y K G + I +EM+A ++ +YN
Sbjct: 647 VKEACEVFEGLKVRGIA-NEFSHAMMVCMYKKVGRYDVAHRICKEMQALGLLTQLLSYNS 705
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
++ A+ + A ++ ++M D TF L I V +G+ + R L+ L
Sbjct: 706 VIQMYASGGRMEEALKIFKKMLASNTAPND-ATFQALKVILVRSGVTKNETRKLELLRRN 764
Query: 259 NAH 261
N H
Sbjct: 765 NTH 767
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 65/163 (39%), Gaps = 8/163 (4%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TYG+L+N C+ A L M + L + N +M + K G E +
Sbjct: 175 TYGTLINVCCQGGRESVALLWLGDMCKRGLMPDEVTMNIVMQAHKKAGEYETAGLFFERW 234
Query: 185 KASSI--MPDS-----YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
+ SI M S YTYN + + +M R+G VA TF+++
Sbjct: 235 SSDSIRRMEGSSHYSLYTYNTLIDTYGKAGHLEKVSDTFNQMLREG-VAPSVVTFNSMIH 293
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
++ + E+ ++ +E D Y LI LY ++ ++
Sbjct: 294 VWGKHHRMEQVASLVRMMEEFQCFPDTRTYNILIALYRESNDI 336
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 120/325 (36%), Gaps = 63/325 (19%)
Query: 147 EKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV 206
E+ ELN+ + +N ++ K + + + EM + + PD+ TY +
Sbjct: 131 EQGHELNV----IHYNVMLYTVGKARRWDLVLRLWHEMHSFGVAPDNSTYGTLINVCCQG 186
Query: 207 NDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA----ER----ALKELENR 258
S A + +M + G + D T + + + +AG +E A ER +++ +E
Sbjct: 187 GRESVALLWLGDMCKRG-LMPDEVTMNIVMQAHKKAGEYETAGLFFERWSSDSIRRMEG- 244
Query: 259 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 318
++H L Y LI YG+ G+L +V +T N Q+L
Sbjct: 245 SSHYSLYTYNTLIDTYGKAGHLEKV-----------SDTFN-------QML--------- 277
Query: 319 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 378
G A + N MI + K R+E L P+ +T+ I
Sbjct: 278 -------REGVAP-SVVTFNSMIHVWGKHHRMEQVASLVRMMEEFQCFPDTRTYNILIAL 329
Query: 379 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 438
Y + D+ +A + G VP + RT + + V AE L K
Sbjct: 330 YRESNDIDIA------EYYYCKMKGENLVPDVVSCRTLLYGYSIRGMVTKAEALL----K 379
Query: 439 AVDDLGVEVFE----PLIRTYAAAG 459
+D+ G V E L R Y G
Sbjct: 380 EMDERGFVVDEYTQSALTRMYVNVG 404
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 56/283 (19%), Positives = 109/283 (38%), Gaps = 34/283 (12%)
Query: 106 IDAAENYFVDLP--ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNS 163
ID AE Y+ + + ++ +LL Y M KAEALL++M E ++
Sbjct: 336 IDIAEYYYCKMKGENLVPDVVSCRTLLYGYSIRGMVTKAEALLKEMDERGFVVDEYTQSA 395
Query: 164 LMTLYAKTGHPEK----IPAIIQEMKASSIMPD---------------SYTY-------- 196
L +Y G E+ M + + ++ Y
Sbjct: 396 LTRMYVNVGMLEQAWRWFDRFHHHMNSECFSANIDAFGEKGYIVLAEKAFIYCIKKKMLS 455
Query: 197 ----NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERAL 252
NV ++A V + A + + M+R G + D+ T+++L + A L +KA L
Sbjct: 456 VSACNVMIKAYGLVEKLDEACEIADGMERYG-ILPDYVTYASLIQLLSTAKLPKKAIYYL 514
Query: 253 KELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNL 312
++++ D Y +I+ + + G+L ++R + ++ Y +I +
Sbjct: 515 EKMKVVKLLSDCIPYSVVISSFAKIGDLRMAEYLFREMVMSGVRPDVFVYSILIDAYAEV 574
Query: 313 KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEE 355
++ A F + ++ + N +I Y K G + A E
Sbjct: 575 GNVQQASAYFGLMKKDGLCENVTIYNSLIKLYTKVGYVAEARE 617
>gi|414888270|tpg|DAA64284.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 890
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 159/364 (43%), Gaps = 22/364 (6%)
Query: 23 EALYDRLFKKGSSDVSVRQQLNQFLKS-KKRVFKWEVGDTLKKLRDRKLYYPALKLSENM 81
E+L DRL S++ R + + L++ + R+ + ++ R + +L+L + M
Sbjct: 97 ESLIDRL-----SNLPPRGSIARCLETARHRLTLQDFAAVYREFSRRGDWQRSLRLFKYM 151
Query: 82 EKRGMNKTVSDQAIHLDLVAKV--QG---IDAAENYFVDLPETSKNHLTYGSLLNCYCKE 136
+++ + D+ IH ++ + QG +D F DLP S+ L+Y SL+ Y +
Sbjct: 152 QRQSWCR--PDEHIHAIVIGVLGRQGPALLDKCLEVFHDLPAESRTALSYTSLIAAYARN 209
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP----EKIPAIIQEMK---ASSI 189
+ E+A ALL++MK + ++ +N+++ A+ P + + + EM+ + S+
Sbjct: 210 ALHEEARALLDQMKATGVAPTAATYNTVLAACARATDPPVPFDMLLGLFAEMRHDASPSV 269
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
PD TYN + A A + +E ++ M G V+ D ++ ++ + AG +A
Sbjct: 270 RPDLTTYNTLLAAAAVRSLADQSEMLLHTMLEAG-VSPDTVSYRHIVDAFASAGNLSRAA 328
Query: 250 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 309
E+ D SAY L+ + + G ++ + R ++ +Y ++ +
Sbjct: 329 ELFSEMAATGHTADASAYLGLMEAHTRVGATADAVAVLRQMQADGCAPTAATYRVLLDLY 388
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
G + F+E + D NV+ + G + EL + G P+
Sbjct: 389 GRQGRFDGVRQLFREMRTAVPP-DTATYNVLFRVFGDGGFFKEVVELFHDMLKTGVQPDM 447
Query: 370 KTWE 373
T E
Sbjct: 448 VTCE 451
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 131/349 (37%), Gaps = 51/349 (14%)
Query: 89 TVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLNCYCKELMTEKAEALL 146
TVS + I +D A + A F ++ T + + Y L+ + + T A A+L
Sbjct: 308 TVSYRHI-VDAFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHTRVGATADAVAVL 366
Query: 147 EKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR----- 201
+M+ ++ + L+ LY + G + + + +EM+ +++ PD+ TYNV R
Sbjct: 367 RQMQADGCAPTAATYRVLLDLYGRQGRFDGVRQLFREMR-TAVPPDTATYNVLFRVFGDG 425
Query: 202 -----------------------------ALAAVNDISG-AERVIEEMKRDGRV-AADWT 230
A + G A V+E M R+G V AD
Sbjct: 426 GFFKEVVELFHDMLKTGVQPDMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTAD-- 483
Query: 231 TFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
++ L A ++E+A A + + L Y L Y + G E I+ +
Sbjct: 484 AYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETYNALAFAYARGGLFQEAEAIFSRM 543
Query: 291 RLAFPNTANI-----SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 345
N A I S+ +I+ L A K + E D R ++ AY
Sbjct: 544 S----NNAGIQKSKDSFDALIEAYCQGSRLDDAVKAYMEMRKSRFNPDERSLEGVLNAYC 599
Query: 346 KEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
G ++ ++E E + P+ + + Y RN A D LE+
Sbjct: 600 IAGVIDESKEQFEELQSSVTMPSVIAYCMMLSLYARNDRWTDAYDLLEE 648
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/370 (20%), Positives = 156/370 (42%), Gaps = 15/370 (4%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL L E M RG V ++ + K+ +D A + + N +TYG+L++
Sbjct: 284 ALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVD 343
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C+ + A L+ KM E +++ +N++M ++ + E+ ++Q M + P
Sbjct: 344 GFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPP 403
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D+ Y+ + + A ++E+M R G D S L +A + A+
Sbjct: 404 DAINYSTIISGFCKAGKLREAHDLLEQMIRRG-CRPDVACLSTLIDALCKAAAIDSAQEL 462
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL---AFPNTANISYLNMIQV 308
L+ + D+ AY LI + L E W + + +P+ ++Y +++
Sbjct: 463 LRMSIGMDCAPDVVAYSILIHALCKAKRLPEA-ESWLDVMVKNRCYPDV--VTYNSVVDG 519
Query: 309 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 368
L + + A F + D+ +++I ++ K+ L++A ++ ER + P+
Sbjct: 520 LCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPD 579
Query: 369 AKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDG 428
T+ + + G + A D ++ + G P+ T T + + V+
Sbjct: 580 VVTYSALINGLCKAGTVDKAFDVFQEMLGCG------CAPNLVTYNTLIDGLCKINKVEQ 633
Query: 429 AEGFLEILKK 438
A LEI++K
Sbjct: 634 AAEMLEIMRK 643
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 124/286 (43%), Gaps = 5/286 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF---VDLPETSKNHLTYGSLL 130
A L E M +RG V+ + +D + K ID+A+ + + + + + + Y L+
Sbjct: 424 AHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGM-DCAPDVVAYSILI 482
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
+ CK +AE+ L+ M + + +NS++ K+ + M+A+ +M
Sbjct: 483 HALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVM 542
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
PD TY++ + + N++ A +++E MK + + D T+S L + +AG +KA
Sbjct: 543 PDVVTYSIVIHSFCKDNNLDSAFKMLERMK-EAKCVPDVVTYSALINGLCKAGTVDKAFD 601
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
+E+ +L Y LI + + + + +R +I+Y +I L
Sbjct: 602 VFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLC 661
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
N L A + +E + D ++ A K LE E+L
Sbjct: 662 NASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQL 707
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 73/367 (19%), Positives = 160/367 (43%), Gaps = 12/367 (3%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLN 131
A +L E+M +G + V + L + K +D A + + S N +TY ++++
Sbjct: 967 ACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIID 1026
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+CK ++A LLE+M + + + + L+ + K G E +++ M +P
Sbjct: 1027 GHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVP 1086
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ +TYN + +++ A +++ M + G V + +++ + + +A +
Sbjct: 1087 NLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCV-PNVVSYNTVIAGLCKATKVHEGVLL 1145
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
L+++ + N D+ + +I +T + Y ++ ++ + ++Y +++ L
Sbjct: 1146 LEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCK 1205
Query: 312 LKDLPGAEKCFKEW--ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
+ AE +E + GC+ DI N +I K R++ A +L + G P+
Sbjct: 1206 SRRFDQAEYLLREMTRKQGCSP-DIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDD 1264
Query: 370 KTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 429
T+ I + M A + LE + G + P + T T + F + ++D A
Sbjct: 1265 VTYSIVISSLCKWRFMDEANNVLELMLKNG------FDPGAITYGTLIDGFCKTGNLDKA 1318
Query: 430 EGFLEIL 436
L++L
Sbjct: 1319 LEILQLL 1325
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 81/167 (48%), Gaps = 1/167 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +++ +CK+ + A +LE+MKE + +++L+ K G +K + QE
Sbjct: 546 VTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQE 605
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M P+ TYN + L +N + A ++E M++ D T++ L + A
Sbjct: 606 MLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQS-CTPDSITYTCLINGLCNAS 664
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
E+A R L+E++++ D Y L+ +T NL V ++ + +
Sbjct: 665 RLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEM 711
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 132/309 (42%), Gaps = 11/309 (3%)
Query: 99 LVAKV-QGI---DAAENYFVDLPETSK--NHLTYGSLLNCYCKELMTEK--AEALLEKMK 150
+V KV QG+ DAA +F D + + NH TY NC + L+ K +AL
Sbjct: 813 VVGKVLQGVRNGDAALGFF-DWATSQEGYNHDTYTC--NCLLQALLRLKRPKDALQVYRN 869
Query: 151 ELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDIS 210
+L + F L+ + G +++EM + + +NV ++ L + +
Sbjct: 870 KLCCSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLD 929
Query: 211 GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 270
A + +EM+ G D T+S + V++G + A R ++++ ++ ++ Y L
Sbjct: 930 SALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSL 989
Query: 271 ITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCA 330
+ + G L E + + + + + ++Y +I L + A +E G
Sbjct: 990 LHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGC 1049
Query: 331 TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
++ V++ A+ K G+ E+A L E +G PN T+ D + + +++ A
Sbjct: 1050 QPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQ 1109
Query: 391 CLEKAIDTG 399
L I G
Sbjct: 1110 LLSSMIQKG 1118
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/371 (19%), Positives = 145/371 (39%), Gaps = 51/371 (13%)
Query: 73 PALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK----NHLTYGS 128
PA +L + M ++G+ + +H ++ + + + E SK + +TY +
Sbjct: 179 PAYELFDEMNRKGLK---AHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNT 235
Query: 129 LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS 188
++N K + A LLE+M + + +N+++ + K E ++++M
Sbjct: 236 MINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRG 295
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
PD +Y + L ++ + A RV+++M + G + T+ L + G + A
Sbjct: 296 CPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRG-CQPNVITYGTLVDGFCRVGDLDGA 354
Query: 249 ERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQV 308
++++ R YR PN I+Y N++ V
Sbjct: 355 VELVRKMTERG------------------------YR---------PNA--ITYNNIMHV 379
Query: 309 LVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
D+ A + + ++GC I + ++ G + K G+L A +L E+ RRG P
Sbjct: 380 FCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISG-FCKAGKLREAHDLLEQMIRRGCRP 438
Query: 368 NAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVD 427
+ D + + A + L +I G P + + K +
Sbjct: 439 DVACLSTLIDALCKAAAIDSAQELLRMSI------GMDCAPDVVAYSILIHALCKAKRLP 492
Query: 428 GAEGFLEILKK 438
AE +L+++ K
Sbjct: 493 EAESWLDVMVK 503
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/399 (17%), Positives = 158/399 (39%), Gaps = 46/399 (11%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
A ++ + M +RG V +D +V +D A + E N +TY ++++
Sbjct: 319 ACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMH 378
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM------- 184
+C+ E+A +L+ M + ++ ++++++ + K G + ++++M
Sbjct: 379 VFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRP 438
Query: 185 -------------KASSI---------------MPDSYTYNVWMRALAAVNDISGAERVI 216
KA++I PD Y++ + AL + AE +
Sbjct: 439 DVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWL 498
Query: 217 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 276
+ M ++ R D T++++ ++ A + D+ Y +I + +
Sbjct: 499 DVMVKN-RCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCK 557
Query: 277 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIR 335
NL +++ ++ A ++Y +I L + A F+E GCA ++
Sbjct: 558 DNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAP-NLV 616
Query: 336 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 395
N +I K ++E A E+ E R++ P++ T+ + ++ A L +
Sbjct: 617 TYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREM 676
Query: 396 IDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 434
D G +P T T +R ++ +++ E L+
Sbjct: 677 KDKG------CLPDRMTYGTLLRALQKTNNLELVEQLLK 709
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 74/149 (49%), Gaps = 2/149 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL--PETSKNHLTYGSLLN 131
A K+ E M++ V + ++ + K +D A + F ++ + N +TY +L++
Sbjct: 564 AFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLID 623
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK E+A +LE M++ + S+ + L+ E+ +++EMK +P
Sbjct: 624 GLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLP 683
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMK 220
D TY +RAL N++ E++++EM+
Sbjct: 684 DRMTYGTLLRALQKTNNLELVEQLLKEME 712
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 91/197 (46%), Gaps = 3/197 (1%)
Query: 77 LSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYC 134
L E K+G + + +D + K + +D A F+ + + + +TY +++ C
Sbjct: 1216 LREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLC 1275
Query: 135 KELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSY 194
K ++A +LE M + ++ + +L+ + KTG+ +K I+Q + + PD
Sbjct: 1276 KWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVV 1335
Query: 195 TYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE 254
T+++++ L+ + A ++E M R G V D T++ L + +A L E A +
Sbjct: 1336 TFSIFIDWLSKRGRLRQAGELLETMLRAGLV-PDTVTYNTLLKGFCDASLTEDAVDLFEV 1394
Query: 255 LENRNAHRDLSAYQFLI 271
+ D + Y L+
Sbjct: 1395 MRQCGCEPDNATYTTLV 1411
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/302 (18%), Positives = 110/302 (36%), Gaps = 43/302 (14%)
Query: 194 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 253
+ N + L + S A + + +G+ D T+S L S ++ AG A
Sbjct: 127 FCCNCLLNVLVKAHQYSQAHDLFRS-RIEGQWGGDTVTYSTLISGFIRAGKILPAYELFD 185
Query: 254 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLK 313
E+ + ++ ++ G S+ +R + P + ++Y MI L
Sbjct: 186 EMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDS-VTYNTMINGLSKSD 244
Query: 314 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA-------------------- 353
L A + +E ++ N ++ + K R+ENA
Sbjct: 245 RLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYT 304
Query: 354 ---------EELKERAR------RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 398
+++ E R +RG PN T+ D + R GD+ AV+ + K +
Sbjct: 305 TVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTER 364
Query: 399 GRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAA 458
G + P++ T M F + D++ A L+++ + + +I + A
Sbjct: 365 G------YRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKA 418
Query: 459 GR 460
G+
Sbjct: 419 GK 420
>gi|168045050|ref|XP_001774992.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673739|gb|EDQ60258.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 385
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 117/257 (45%), Gaps = 2/257 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY +++ C+ + +A + ++M + S + +N L+ Y K G ++ ++ M
Sbjct: 107 TYTAMIKGCCEAGLYVQARKIFDEMMIEGVKPSIVTYNILIHGYGKAGLFREVERVLSTM 166
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+A+++ PD+ T+N +R I E+ E + R G + D T ++L S Y AGL
Sbjct: 167 EANNVAPDTVTWNTLIRVFGLNCKIPEMEQAYEGLLRQG-LQPDMVTLNSLISAYGTAGL 225
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
FEK E + ++ N Y ++ YG+ G + ++ W+ ++ F + ++ +
Sbjct: 226 FEKMESVTQYMQRYNYPMTRITYNIIMEAYGRAGMVDQMEETWKRMKAEFVKPNSSTFCS 285
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
M+ EK ++ A D V N I A+ + E+ E++ E + +G
Sbjct: 286 MLSAYGRHGYWHNVEKVMRQARYFDAA-DTAVYNAAIDAFQRAQNFEDMEKIFEEMKLKG 344
Query: 365 ADPNAKTWEIFSDYYLR 381
P+ T+ I Y R
Sbjct: 345 HAPDDVTYSILIGAYER 361
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 86/221 (38%), Gaps = 2/221 (0%)
Query: 164 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
L+T+ AK + + + + P + + + N A + E M+
Sbjct: 40 LLTMLAKAKQAAEASNVFDCLLEDKLRPTTAIFTALLTVFTQSNQFKKALEIFESMRLYE 99
Query: 224 RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 283
D T++ + EAGL+ +A + E+ + Y LI YG+ G EV
Sbjct: 100 GCVPDKYTYTAMIKGCCEAGLYVQARKIFDEMMIEGVKPSIVTYNILIHGYGKAGLFREV 159
Query: 284 YRIWRSLRLAFPNTANISYLNMIQVL-VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 342
R+ ++ +++ +I+V +N K +P E+ ++ D+ N +I
Sbjct: 160 ERVLSTMEANNVAPDTVTWNTLIRVFGLNCK-IPEMEQAYEGLLRQGLQPDMVTLNSLIS 218
Query: 343 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
AY G E E + + +R T+ I + Y R G
Sbjct: 219 AYGTAGLFEKMESVTQYMQRYNYPMTRITYNIIMEAYGRAG 259
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 130/307 (42%), Gaps = 25/307 (8%)
Query: 37 VSVRQQLNQFLKS-----KKRVFKWEVGD------TLKKLRDRKLYYPALKLSENMEKRG 85
++V Q NQF K+ R+++ V D +K + LY A K+ + M G
Sbjct: 76 LTVFTQSNQFKKALEIFESMRLYEGCVPDKYTYTAMIKGCCEAGLYVQARKIFDEMMIEG 135
Query: 86 MNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSL-----LNCYCKELM 138
+ ++ I + K E ++ + + +T+ +L LNC E M
Sbjct: 136 VKPSIVTYNILIHGYGKAGLFREVERVLSTMEANNVAPDTVTWNTLIRVFGLNCKIPE-M 194
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
+ E LL + + ++ + NSL++ Y G EK+ ++ Q M+ + TYN+
Sbjct: 195 EQAYEGLLRQGLQPDM----VTLNSLISAYGTAGLFEKMESVTQYMQRYNYPMTRITYNI 250
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
M A + E + MK + V + +TF ++ S Y G + E+ +++
Sbjct: 251 IMEAYGRAGMVDQMEETWKRMKAE-FVKPNSSTFCSMLSAYGRHGYWHNVEKVMRQARYF 309
Query: 259 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 318
+A D + Y I + + N ++ +I+ ++L +++Y +I ++ + A
Sbjct: 310 DAA-DTAVYNAAIDAFQRAQNFEDMEKIFEEMKLKGHAPDDVTYSILIGAYERIRRVDKA 368
Query: 319 EKCFKEW 325
+EW
Sbjct: 369 RDLQEEW 375
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 142/326 (43%), Gaps = 9/326 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
AL L + M+K G+ +++ L K +D A + ++P N +TY +L+
Sbjct: 420 ALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMR 479
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
Y + + A ALL++MK+ + + +N L+ ++ +++ + +P
Sbjct: 480 GYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIP 539
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
TYN + + A V ++M+ G + + T+++ Y G + A +
Sbjct: 540 TMMTYNSIINGFVKAGMMGSAFTVYQQMREKG-LPPNIITYTSFIDGYCRTGCSDMALKM 598
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL---RLAFPNTANISYLNMIQV 308
L ++ R D+ AY LI + Q GN+S ++ L LA PNT + Y ++I
Sbjct: 599 LNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLA-PNT--VVYNSLITG 655
Query: 309 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 368
NL + K ++ G D +I ++K+G + A EL +G P+
Sbjct: 656 YKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPD 715
Query: 369 AKTWEIFSDYYLRNGDMKLAVDCLEK 394
A T+ + R+GD+ A LE+
Sbjct: 716 AFTFTALTHGLCRSGDIDGAKKLLEE 741
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/252 (19%), Positives = 114/252 (45%), Gaps = 1/252 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY S++N + K M A + ++M+E L + + + S + Y +TG + ++ +
Sbjct: 542 MTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLND 601
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
++ + PD YN + ++S A +++ + +DG +A + +++L + Y
Sbjct: 602 VRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDG-LAPNTVVYNSLITGYKNLN 660
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
+ ++ + + + D S Y LI + + GN++ ++ + ++
Sbjct: 661 MMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFT 720
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+ L D+ GA+K +E ++ + N++I Y ++ +L+ A L +
Sbjct: 721 ALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNM 780
Query: 364 GADPNAKTWEIF 375
G P+ T++I
Sbjct: 781 GIQPDDTTYDIL 792
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 134/335 (40%), Gaps = 49/335 (14%)
Query: 142 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 201
A AL +M+ + F++LM+ K G E + EM + I PD Y + +
Sbjct: 176 ALALFMEMRGRGYRVDAWMFDALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAIT 235
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 261
AL + D A R++ EMK G D+ T+ + + V+ G E+A R E+ +
Sbjct: 236 ALCKLGDGGRALRMLREMKEVGFDTCDF-TYRTMVDVLVKTGRMEEALRVNDEMRDAGKK 294
Query: 262 RDLSAYQFLI----------------------------TLYG-------QTGNLSEVYRI 286
D+ L+ +YG Q G + Y +
Sbjct: 295 MDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYEL 354
Query: 287 WRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGA 343
R + + P+T +S + ++ L+N + A F+E +SG D+ N +I
Sbjct: 355 CRQMTGQGLLPSTFELSLV--LKGLLNDRRWKDAVCLFEEMADSGLP--DVFTYNNLIHW 410
Query: 344 YAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDG 403
+ + +L A L +R ++ G P+ T+ Y + G M AV + G
Sbjct: 411 HCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEG---- 466
Query: 404 GKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 438
+ P+ T T MR + +KD D A L+ +K+
Sbjct: 467 --FKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQ 499
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 90/201 (44%), Gaps = 3/201 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
ALK+ ++ +RG+ + ++ + + A V L + + N + Y SL+
Sbjct: 595 ALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLIT 654
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
Y M ++ E M + + + + +L+ ++K G+ + EM A +P
Sbjct: 655 GYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIP 714
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D++T+ L DI GA++++EEM+R V + ++ L + Y+ ++A R
Sbjct: 715 DAFTFTALTHGLCRSGDIDGAKKLLEEMRR-LDVRPNVFIYNMLINGYLRDCKLQEAFRL 773
Query: 252 LKELENRNAHRDLSAYQFLIT 272
E+ N D + Y L++
Sbjct: 774 HDEMLNMGIQPDDTTYDILVS 794
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/321 (18%), Positives = 119/321 (37%), Gaps = 43/321 (13%)
Query: 170 KTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADW 229
+ G +K + ++M ++P ++ ++ ++ L A + EEM G D
Sbjct: 344 QVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSG--LPDV 401
Query: 230 TTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS 289
T++NL + +A +A ++ ++ Y L+ Y + G + E +++
Sbjct: 402 FTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSE 461
Query: 290 LRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCA----TYDIRVT------- 337
+ + ++Y+ +++ + KD A E ++G + TY++ +
Sbjct: 462 MPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDR 521
Query: 338 -----------------------NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 374
N +I + K G + +A + ++ R +G PN T+
Sbjct: 522 VCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTS 581
Query: 375 FSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 434
F D Y R G +A+ L G P + F QE ++ A L
Sbjct: 582 FIDGYCRTGCSDMALKMLNDVRRRG------LQPDIVAYNALINGFCQEGNMSHALQLLV 635
Query: 435 ILKKAVDDLGVEVFEPLIRTY 455
IL K V+ LI Y
Sbjct: 636 ILLKDGLAPNTVVYNSLITGY 656
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 134/319 (42%), Gaps = 10/319 (3%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
+ N +TY +L++ CK ++A AL+E M E + + +NS++T + + ++
Sbjct: 106 AANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHG 165
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+++M A PD TY + D+ ++ E+ R G D T+S +
Sbjct: 166 FMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRG-FTPDIVTYSTVIDGL 224
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
+AG A +E+ + Y LI Y + G++ E R+ +
Sbjct: 225 CKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDV 281
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
++Y ++ + L A + F++ + + D+ ++ EGR+E+A EL E
Sbjct: 282 VTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEE 341
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
RRG P T+ D Y + ++ A E+ + R G +VP++ T +
Sbjct: 342 ITRRGCPPTIYTYNCVVDGYCKANQVRKA----EELVADFRSRG--FVPNTVTYNILVAG 395
Query: 420 FEQEKDVDGAEGFLEILKK 438
+ D A +L+ L
Sbjct: 396 CCRAGRTDQALQYLDQLNS 414
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 148/364 (40%), Gaps = 12/364 (3%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A +L E M RGM + +D + K + +D A + E + +TY S++
Sbjct: 93 ARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIIT 152
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C+ ++A +E+M + + +L+ + K+ + ++ E+ P
Sbjct: 153 GFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTP 212
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D TY+ + L + A + EEM A T+++L Y AG ++A R
Sbjct: 213 DIVTYSTVIDGLCKAGRLRDAVDIFEEMS----CAPTAITYNSLIGGYCRAGDMDEAIRL 268
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
L ++ + D+ Y L++ + + G L + Y +++ + + +++ +++ L
Sbjct: 269 LGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCG 328
Query: 312 LKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
+ A + +E GC I N ++ Y K ++ AEEL R RG PN
Sbjct: 329 EGRMEDALELLEEITRRGCPP-TIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTV 387
Query: 371 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 430
T+ I R G A+ + +D +GG S + ++ D A
Sbjct: 388 TYNILVAGCCRAGRTDQAL----QYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAV 443
Query: 431 GFLE 434
F E
Sbjct: 444 QFYE 447
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 116/282 (41%), Gaps = 12/282 (4%)
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
++QEM ++ +PD+ T V +++L + + A ++EEM G +AA+ T+S L
Sbjct: 61 VLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRG-MAANAITYSALVDGL 119
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
+ ++A ++ + R + Y +IT + + + E + + +
Sbjct: 120 CKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDI 179
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
I+Y +I +D+ + E T DI + +I K GRL +A ++ E
Sbjct: 180 ITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEE 239
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
P A T+ Y R GDM A+ L K +D K P T T M
Sbjct: 240 M---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDD------KCAPDVVTYTTLMSA 290
Query: 420 FEQEKDVDGA-EGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 460
F + +D A E F +++ + V F L+ GR
Sbjct: 291 FCKMGRLDDAYELFQQMVANKLSP-DVVTFTSLVDGLCGEGR 331
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/299 (19%), Positives = 120/299 (40%), Gaps = 35/299 (11%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCY 133
L+L + +RG + + +D + K + A + F ++ + +TY SL+ Y
Sbjct: 198 GLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM-SCAPTAITYNSLIGGY 256
Query: 134 CKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDS 193
C+ ++A LL KM + + + +LM+ + K G + + Q+M A+ + PD
Sbjct: 257 CRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDV 316
Query: 194 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 253
T+ + L + A ++EE+ R G + T++ + Y +A KAE +
Sbjct: 317 VTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIY-TYNCVVDGYCKANQVRKAEELVA 375
Query: 254 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLK 313
+ +R + Y L+ + G + + YL+ +
Sbjct: 376 DFRSRGFVPNTVTYNILVAGCCRAGRTDQA----------------LQYLDQLN------ 413
Query: 314 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
E G + + +++ A ++GR ++A + E +RG P A T+
Sbjct: 414 -----------SEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATF 461
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 109/256 (42%), Gaps = 6/256 (2%)
Query: 140 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 199
+ A L+E+M + +++ +++L+ K ++ A+++ M P TYN
Sbjct: 91 DDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSI 150
Query: 200 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 259
+ + A +E+M +G D T++ L + ++ + L E+ R
Sbjct: 151 ITGFCRARRVDEAHGFMEQMVAEG-CHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRG 209
Query: 260 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 319
D+ Y +I + G L + I+ + A P I+Y ++I D+ A
Sbjct: 210 FTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCA-PTA--ITYNSLIGGYCRAGDMDEAI 266
Query: 320 KCF-KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 378
+ K + CA D+ ++ A+ K GRL++A EL ++ P+ T+ D
Sbjct: 267 RLLGKMVDDKCAP-DVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDG 325
Query: 379 YLRNGDMKLAVDCLEK 394
G M+ A++ LE+
Sbjct: 326 LCGEGRMEDALELLEE 341
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 106/275 (38%), Gaps = 20/275 (7%)
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
PD TY + L+ + A +V++EM R D TT + + + A
Sbjct: 37 PDFLTYTKLVHGLSKARRLRDAVQVLQEMV-SARHVPDNTTLTVVVQSLCLGDRVDDARE 95
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQV 308
++E+ +R + Y L+ + L E + ++ R P ++Y ++I
Sbjct: 96 LVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTV--VTYNSIITG 153
Query: 309 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 368
+ + A ++ + DI +IG + K + EL RRG P+
Sbjct: 154 FCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPD 213
Query: 369 AKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDG 428
T+ D + G ++ AVD E+ P++ T + + + + D+D
Sbjct: 214 IVTYSTVIDGLCKAGRLRDAVDIFEEM---------SCAPTAITYNSLIGGYCRAGDMDE 264
Query: 429 AEGFLEILKKAVDD---LGVEVFEPLIRTYAAAGR 460
A + +L K VDD V + L+ + GR
Sbjct: 265 A---IRLLGKMVDDKCAPDVVTYTTLMSAFCKMGR 296
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 164/391 (41%), Gaps = 43/391 (10%)
Query: 25 LYDRLFKKG--SSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENME 82
L DR+ + G ++V+ L KS + E+ L+K+ +RK+ A+K S ++
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL---LRKMEERKIKLDAVKYSIIID 255
Query: 83 KRGMNKTVS-DQAIHLDLVAKVQGIDAAENYFVDLP----------------------ET 119
G+ K S D A +L +++G A + L +
Sbjct: 256 --GLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI 313
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
+ + + + +L++C+ KE +AE L ++M + + ++ + SL+ + K +K
Sbjct: 314 TPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANH 373
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
++ M + P+ T+N+ + N I + +M G V AD T++ L +
Sbjct: 374 MLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG-VVADTVTYNTLIQGF 432
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
E G E A+ +E+ +R D+ +Y+ L+ G + I+ + + +
Sbjct: 433 CELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKS-KMELD 491
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY------DIRVTNVMIGAYAKEGRLENA 353
I N+I + + A K W+ C+ D++ N+MIG K+G L A
Sbjct: 492 IGIYNII-----IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA 546
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNGD 384
+ L + G PN T+ I +L GD
Sbjct: 547 DLLFRKMEEDGHSPNGCTYNILIRAHLGEGD 577
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 114/276 (41%), Gaps = 7/276 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TYG +L CK T A LL KM+E + ++ ++ ++ K G + +
Sbjct: 211 NEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLF 270
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYV 240
EM+ D Y +R +++ +M KR ++ D FS L +V
Sbjct: 271 NEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR--KITPDVVAFSALIDCFV 328
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTA 298
+ G +AE KE+ R D Y LI + + L + + + + PN
Sbjct: 329 KEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIR 388
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+ L NL D G E F++ D N +I + + G+LE A+EL +
Sbjct: 389 TFNILINGYCKANLID-DGLEL-FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQ 446
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
R P+ +++I D NG+ + A++ EK
Sbjct: 447 EMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEK 482
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/349 (19%), Positives = 138/349 (39%), Gaps = 11/349 (3%)
Query: 114 VDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGH 173
++L + N T ++NC C+ A + + K+ +L ++ F++L+ G
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157
Query: 174 PEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFS 233
+ ++ M P T N + L +S A +I+ M G + T+
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETG-FQPNEVTYG 216
Query: 234 NLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 293
+ + ++G A L+++E R D Y +I + G+L + ++ + +
Sbjct: 217 PVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 276
Query: 294 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
I Y +I+ K ++ T D+ + +I + KEG+L A
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREA 336
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETI 413
EEL + +RG P+ T+ D + + + A L+ + G G P+ T
Sbjct: 337 EELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG------PNIRTF 390
Query: 414 RTFMRHFEQEKDV-DGAEGFLEI-LKKAVDDLGVEVFEPLIRTYAAAGR 460
+ + + + DG E F ++ L+ V D + LI+ + G+
Sbjct: 391 NILINGYCKANLIDDGLELFRKMSLRGVVAD--TVTYNTLIQGFCELGK 437
>gi|326532582|dbj|BAK05220.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 697
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/376 (21%), Positives = 149/376 (39%), Gaps = 44/376 (11%)
Query: 46 FLKSKKRVFKWEVG---DTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAK 102
F + ++ KW +G +K D + AL MEKRG+ S
Sbjct: 331 FQRMNRKGVKWSLGVSASLIKIFCDEGMKKEALIFQSEMEKRGIPSNTS----------- 379
Query: 103 VQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFN 162
Y +++N YCK E+AE L +MKE L + + +N
Sbjct: 380 ----------------------IYNTIMNVYCKCSQIEEAEGLFAEMKEKGLKPTKVTYN 417
Query: 163 SLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDIS-GAERVIEEMKR 221
LM Y++ PE + +++ EM P++ +YN + A +S AE MK+
Sbjct: 418 ILMDAYSRRLQPEVVESLLLEMHDLGFQPNARSYNCLISAYGRQKKMSEKAEDAFLRMKK 477
Query: 222 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 281
G + A +++++L Y +G +EKA A +++ L Y L+ ++ + GN
Sbjct: 478 GG-IKATSSSYTSLICAYAVSGQYEKAHIAYLDMKREGLKPSLETYTALLDIFRRAGNTE 536
Query: 282 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 341
++ W+S+ +++ ++ L A E+ N+++
Sbjct: 537 KLMETWKSMTDEKVGCTRVTFHMVLDGLAKHGLFVQARDVICEFGKIGLPPTAMTYNILM 596
Query: 342 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRG 401
AYAK G+ +L + P++ T+ Y R D A ++ + G+
Sbjct: 597 NAYAKGGQHYKLPQLLKEMSTLELKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQ- 655
Query: 402 DGGKWVPSSETIRTFM 417
VP +++ R +
Sbjct: 656 -----VPDAKSYRKLL 666
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 138/325 (42%), Gaps = 21/325 (6%)
Query: 71 YYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENY-FVDLPETSKNHLTYG-- 127
Y A K+ E+MEK + +I L LV K + A +++ F + G
Sbjct: 288 YDDAWKIFESMEKNNVQPDHVTSSIML-LVMKRRKASAKDSWKFFQRMNRKGVKWSLGVS 346
Query: 128 -SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKA 186
SL+ +C E M ++A +M++ + ++ +N++M +Y K E+ + EMK
Sbjct: 347 ASLIKIFCDEGMKKEALIFQSEMEKRGIPSNTSIYNTIMNVYCKCSQIEEAEGLFAEMKE 406
Query: 187 SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV-EAGLF 245
+ P TYN+ M A + E ++ EM G + +++ L S Y + +
Sbjct: 407 KGLKPTKVTYNILMDAYSRRLQPEVVESLLLEMHDLG-FQPNARSYNCLISAYGRQKKMS 465
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
EKAE A ++ S+Y LI Y +G + + + ++ + +Y +
Sbjct: 466 EKAEDAFLRMKKGGIKATSSSYTSLICAYAVSGQYEKAHIAYLDMKREGLKPSLETYTAL 525
Query: 306 IQVLVNLKDLPGAEKCFKEWES------GCATYDIRVT-NVMIGAYAKEGRLENAEELKE 358
+ + + EK + W+S GC RVT ++++ AK G A ++
Sbjct: 526 LDIFRRAGN---TEKLMETWKSMTDEKVGCT----RVTFHMVLDGLAKHGLFVQARDVIC 578
Query: 359 RARRRGADPNAKTWEIFSDYYLRNG 383
+ G P A T+ I + Y + G
Sbjct: 579 EFGKIGLPPTAMTYNILMNAYAKGG 603
>gi|218197756|gb|EEC80183.1| hypothetical protein OsI_22045 [Oryza sativa Indica Group]
Length = 577
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 120/265 (45%), Gaps = 3/265 (1%)
Query: 124 LTYGSLLNCYCKE--LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+++ +L+N K L A LL ++++ L ++ +N+L++ ++ + + A+
Sbjct: 30 VSFNTLINARAKSGCLAAGVALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVF 89
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+EM AS PD +TYN + AE + +E+ G D T+++L + +
Sbjct: 90 EEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKG-FQPDAVTYNSLLYAFAK 148
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G E+ ER +EL +D Y +I +YG+ G L ++ +R ++
Sbjct: 149 EGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVT 208
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y ++ L + + A K +E + + +I AYAK GR ++AE +R
Sbjct: 209 YTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMV 268
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMK 386
G P+ + + D + R+ + +
Sbjct: 269 ESGVKPDRLAYLVMLDVFARSDETR 293
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 119/272 (43%), Gaps = 3/272 (1%)
Query: 130 LNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA--IIQEMKAS 187
+ Y + + A LL+ M++ ++ + FN+L+ AK+G A ++ E++ +
Sbjct: 1 MGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQA 60
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
+ PD+ TYN + A + +++ A V EEM D T++ + S++ G ++
Sbjct: 61 GLRPDAITYNTLISACSQGSNLDDAVAVFEEMIA-SECRPDLWTYNAMVSVHGRCGKAQE 119
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 307
AE KEL + D Y L+ + + G++ V R+ L A I+Y MI
Sbjct: 120 AELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIH 179
Query: 308 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
+ + L A + E + T D V++ + K R+ A ++ E G P
Sbjct: 180 MYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKP 239
Query: 368 NAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
T+ Y ++G A ++ +++G
Sbjct: 240 TLVTFSALICAYAKSGRQDDAERTFDRMVESG 271
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 120/276 (43%), Gaps = 10/276 (3%)
Query: 159 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 218
+P +L+ + + G K I++ ++ S +PD TYNV + +I+ A V++
Sbjct: 138 IPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDR 197
Query: 219 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 278
M V+ D T++ + ++G ++A L + R+ + D+ Y LI +
Sbjct: 198 MS----VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDS 253
Query: 279 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 338
+ ++ +R ++Y ++ + L A K + S ++ N
Sbjct: 254 GVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHN 313
Query: 339 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 398
+++ + GR +AE+L R+G P+ T+ I ++ R G + A+D LEK
Sbjct: 314 IILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQH 373
Query: 399 GRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 434
G P+S + + F +EK +D A +LE
Sbjct: 374 G------CQPNSLSYNPLLHGFCKEKKMDRAIEYLE 403
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 114/284 (40%), Gaps = 36/284 (12%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY L+ C++ A LL++M++ + +N L+ K G ++ + +
Sbjct: 240 ITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLND 299
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M +S P+ T+N+ +R++ + AE+++ +M R G + TF+ L + G
Sbjct: 300 MPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG-FSPSVVTFNILINFLCRKG 358
Query: 244 LFEKA--------------------------------ERALKELE---NRNAHRDLSAYQ 268
L +A +RA++ LE +R + D+ Y
Sbjct: 359 LLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYN 418
Query: 269 FLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESG 328
++T + G + + I L + I+Y +I L A K E +
Sbjct: 419 TMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK 478
Query: 329 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
D + ++G ++EG+++ A + R G PNA T+
Sbjct: 479 DLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTF 522
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/279 (19%), Positives = 124/279 (44%), Gaps = 10/279 (3%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +++ YCK A ++L++M ++ + +N+++ +G ++ ++
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDR 229
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M PD TY + + A + + A ++++EM RD D T++ L + + G
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM-RDRGCTPDVVTYNVLVNGICKEG 288
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS-LRLAFPNTANISY 302
++A + L ++ + ++ + ++ TG + ++ LR F + ++
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF--SPSVVT 346
Query: 303 LNMIQVLVNLKDLPG--AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
N++ + K L G + K + GC + N ++ + KE +++ A E ER
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSY-NPLLHGFCKEKKMDRAIEYLERM 405
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
RG P+ T+ ++G ++ AV+ L + G
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 3/185 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A KL +M ++G + +V I ++ + + + A + +P+ N L+Y LL+
Sbjct: 328 AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLH 387
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+CKE ++A LE+M + +N+++T K G E I+ ++ + P
Sbjct: 388 GFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP 447
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
TYN + LA A ++++EM R + D T+S+L G ++A +
Sbjct: 448 VLITYNTVIDGLAKAGKTGKAIKLLDEM-RAKDLKPDTITYSSLVGGLSREGKVDEAIKF 506
Query: 252 LKELE 256
E E
Sbjct: 507 FHEFE 511
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 70/148 (47%), Gaps = 1/148 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY ++L CK+ E A +L ++ + +N+++ AK G K ++ E
Sbjct: 415 VTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDE 474
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+A + PD+ TY+ + L+ + A + E +R G + + TF+++ ++
Sbjct: 475 MRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG-IRPNAVTFNSIMLGLCKSR 533
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLI 271
++A L + NR + ++Y LI
Sbjct: 534 QTDRAIDFLVFMINRGCKPNETSYTILI 561
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 165/396 (41%), Gaps = 20/396 (5%)
Query: 74 ALKLSENMEKRGM--NKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSL 129
A+++ ++ME RG+ N+ V IH + K + +D A + + + + +TY L
Sbjct: 145 AVRIFKSMEARGLAPNEVVYSALIHG--LCKARKMDCALEMLAQMKKAFCTPDTITYNVL 202
Query: 130 LNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP-AIIQEMKASS 188
++ CK E A A ++M E +N L++ + K G+ + ++ QE +
Sbjct: 203 IDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTING 262
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
D +TY + LA I A ++E++ +G T++ L + + G E+A
Sbjct: 263 CTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANG-CTPTIATYNALLNGLCKMGRLEEA 321
Query: 249 ERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQV 308
L+++ + D+ Y LI G+ E Y++++ + L + Y +I+
Sbjct: 322 IDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRE 381
Query: 309 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 368
L+ +P A +K S D+ + MI +K GR+ A + + RG PN
Sbjct: 382 LLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPN 441
Query: 369 AKTWEIFSDYYLRNGDMKLAVDCL---EKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKD 425
+ + M A++ L +KA T P + T + + D
Sbjct: 442 EVVYSALIHGLCKARKMDCALEMLAQMKKAFCT---------PDTITYNILIDGLCKSGD 492
Query: 426 VDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 461
V+ A F + + +A V + LI + AG T
Sbjct: 493 VEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNT 528
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/355 (20%), Positives = 144/355 (40%), Gaps = 12/355 (3%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A+ L E + G T++ L+ + K+ ++ A + + + + + +TY SL++
Sbjct: 5 AVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLID 64
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
KE + +A L ++M L ++ + +L+ +TG + ++ + M + +P
Sbjct: 65 GLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVP 124
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D T + + L+ I A R+ + M+ G +A + +S L +A + A
Sbjct: 125 DVVTLSTMIDGLSKAGRIGAAVRIFKSMEARG-LAPNEVVYSALIHGLCKARKMDCALEM 183
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
L +++ D Y LI ++G++ + + A +Y +I
Sbjct: 184 LAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCK 243
Query: 312 LKDLPGAEKCFKEWES--GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
+ A + + GC T DI ++ AK ++E A L E+ G P
Sbjct: 244 AGNTDAASHSLAQETTINGC-TIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTI 302
Query: 370 KTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 424
T+ + + G ++ A+D L K +D G P T + + +EK
Sbjct: 303 ATYNALLNGLCKMGRLEEAIDLLRKIVDNG------CTPDVVTYTSLIDGLGKEK 351
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 125/318 (39%), Gaps = 12/318 (3%)
Query: 79 ENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLT-----YGSLLNCY 133
+ M + G V I + K DAA + ET+ N T Y ++++
Sbjct: 220 DEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQ--ETTINGCTIDIHTYTAIVDWL 277
Query: 134 CKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDS 193
K E+A AL+EK+ + +N+L+ K G E+ +++++ + PD
Sbjct: 278 AKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDV 337
Query: 194 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 253
TY + L A ++ +EM G +A D ++ L ++ G +A K
Sbjct: 338 VTYTSLIDGLGKEKRSFEAYKLFKEMALRG-LALDTVCYTALIRELLQTGKIPQASSVYK 396
Query: 254 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVN 311
+ + D+ +I + G + RI++S+ R PN + Y +I L
Sbjct: 397 TMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPN--EVVYSALIHGLCK 454
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+ + A + + + T D N++I K G +E A + G P+ T
Sbjct: 455 ARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYT 514
Query: 372 WEIFSDYYLRNGDMKLAV 389
+ I + + G+ A
Sbjct: 515 YNILISGFCKAGNTDAAC 532
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 102/251 (40%), Gaps = 5/251 (1%)
Query: 140 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 199
E+A AL+EK+ + +N+L+ K G E+ +++++ + PD TY
Sbjct: 3 EEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSL 62
Query: 200 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 259
+ L A ++ +EM G +A D ++ L ++ G +A K + +
Sbjct: 63 IDGLGKEKRSFEAYKLFKEMALRG-LALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121
Query: 260 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 317
D+ +I + G + RI++S+ R PN + Y +I L + +
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPN--EVVYSALIHGLCKARKMDC 179
Query: 318 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 377
A + + + T D NV+I K G +E A + G P+ T+ I
Sbjct: 180 ALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILIS 239
Query: 378 YYLRNGDMKLA 388
+ + G+ A
Sbjct: 240 GFCKAGNTDAA 250
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 102/256 (39%), Gaps = 13/256 (5%)
Query: 209 ISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQ 268
I A ++E++ +G T++ L + + G E+A L+++ + D+ Y
Sbjct: 2 IEEAVALMEKITANG-CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60
Query: 269 FLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESG 328
LI G+ E Y++++ + L + Y +I+ L+ +P A +K S
Sbjct: 61 SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120
Query: 329 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 388
D+ + MI +K GR+ A + + RG PN + + M A
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180
Query: 389 VDCL---EKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGV 445
++ L +KA T P + T + + DV+ A F + + +A V
Sbjct: 181 LEMLAQMKKAFCT---------PDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDV 231
Query: 446 EVFEPLIRTYAAAGRT 461
+ LI + AG T
Sbjct: 232 YTYNILISGFCKAGNT 247
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 76/183 (41%), Gaps = 3/183 (1%)
Query: 79 ENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKE 136
+ M G V + +D ++K I AA F + + N + Y +L++ CK
Sbjct: 396 KTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 455
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 196
+ A +L +MK+ ++ +N L+ K+G E A EM + PD YTY
Sbjct: 456 RKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTY 515
Query: 197 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 256
N+ + + A V ++M R +A+ T+ L S + KA + ++
Sbjct: 516 NILISGFCKAGNTDAACGVFDDMSSS-RCSANVVTYGALISGLCKRRQLTKASLYFQHMK 574
Query: 257 NRN 259
R
Sbjct: 575 ERG 577
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 68/154 (44%), Gaps = 6/154 (3%)
Query: 74 ALKLSENMEKRGM--NKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSL 129
A+++ ++ME RG+ N+ V IH + K + +D A + + + + +TY L
Sbjct: 426 AVRIFKSMEARGLAPNEVVYSALIHG--LCKARKMDCALEMLAQMKKAFCTPDTITYNIL 483
Query: 130 LNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
++ CK E A A ++M E +N L++ + K G+ + + +M +S
Sbjct: 484 IDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRC 543
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
+ TY + L ++ A + MK G
Sbjct: 544 SANVVTYGALISGLCKRRQLTKASLYFQHMKERG 577
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 140/316 (44%), Gaps = 10/316 (3%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TYGSL++ CK E+A +LEKMKE+ L +++ +N+L+ Y G K EM
Sbjct: 308 TYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEM 367
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+I+P TYN+ + AL + A+ +I++M G + D T++ L + Y G
Sbjct: 368 VRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSG-IVPDSITYNILINGYCRCGN 426
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+KA E+ ++ L Y LI + + + ++ + + I +
Sbjct: 427 AKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNA 486
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+I +L A KE + D N ++ +EG++E A EL + +RRG
Sbjct: 487 LIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRG 546
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 424
P+ ++ Y + GD+ A ++ + G + P+ T ++ + +
Sbjct: 547 IRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIG------FNPTLLTYNALIQGLCKNQ 600
Query: 425 DVDGAEGFLEILKKAV 440
D AE E+LK+ V
Sbjct: 601 QGDLAE---ELLKEMV 613
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 143/336 (42%), Gaps = 14/336 (4%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY ++++ YC E A +L+ MK + S + SL++ K G E+ I+
Sbjct: 270 NVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGIL 329
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
++MK ++P + TYN + D+ A +EM R + +T++ L
Sbjct: 330 EKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRA-ILPTVSTYNLLIHALFL 388
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G ++A+ +K++ + D Y LI Y + GN + + + + ++
Sbjct: 389 EGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVT 448
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y ++I VL + A+ F++ A+ D+ + N +I + G L+ A L +
Sbjct: 449 YTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMD 508
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
+R P+ T+ R G ++ A + L++ G P + T + +
Sbjct: 509 KRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRG------IRPDHISYNTLISGYS 562
Query: 422 QEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAA 457
+ D++ A ++ + +G F P + TY A
Sbjct: 563 KRGDINDA----FTIRDEMLSIG---FNPTLLTYNA 591
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 130/314 (41%), Gaps = 7/314 (2%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
T+ ++N CKE +KA+ + M+ L + + + +N+++ Y G E ++ M
Sbjct: 238 TFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIM 297
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
K + PDSYTY + + + A ++E+MK G + T++ L Y G
Sbjct: 298 KNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPT-AVTYNTLIDGYCNKGD 356
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
KA E+ R +S Y LI G + E + + + + +I+Y
Sbjct: 357 LVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNI 416
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+I + A E S + +I +K R++ A++L E+ R G
Sbjct: 417 LINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREG 476
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 424
A P+ + D + NG++ A L++ D VP T T M+ +E
Sbjct: 477 ASPDLIMFNALIDGHCANGNLDRAFALLKEM------DKRNIVPDEVTYNTLMQGRCREG 530
Query: 425 DVDGAEGFLEILKK 438
V+ A L+ +K+
Sbjct: 531 KVEEARELLKEMKR 544
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 139/341 (40%), Gaps = 9/341 (2%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
+K+ + + L+ C+ + A + MKE + FN++++L+ K E +
Sbjct: 163 TKSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWV 222
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+ EM I YT+N+ + L + A+ I M+ G V + T++ + Y
Sbjct: 223 LYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLG-VKPNVVTYNTVIHGY 281
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR-LAFPNTA 298
G E A L ++NR D Y LI+ + G L E I ++ + TA
Sbjct: 282 CSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTA 341
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
++Y +I N DL A E + N++I A EG+++ A+ + +
Sbjct: 342 -VTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIK 400
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 418
G P++ T+ I + Y R G+ K A + ++ I G P+ T + +
Sbjct: 401 DMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKG------IQPTLVTYTSLIY 454
Query: 419 HFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
+ + A+ E + + + +F LI + A G
Sbjct: 455 VLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANG 495
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 100/211 (47%), Gaps = 3/211 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A L + M +G+ T+ + +++K + AA++ F + S + + + +L++
Sbjct: 430 AFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALID 489
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C ++A ALL++M + N+ + +N+LM + G E+ +++EMK I P
Sbjct: 490 GHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRP 549
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D +YN + + DI+ A + +EM G T++ L + + AE
Sbjct: 550 DHISYNTLISGYSKRGDINDAFTIRDEMLSIG-FNPTLLTYNALIQGLCKNQQGDLAEEL 608
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSE 282
LKE+ ++ D S Y LI G+ + SE
Sbjct: 609 LKEMVSKGITPDDSTYFSLIEGIGKVDDSSE 639
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 129/299 (43%), Gaps = 6/299 (2%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + +TY +LLN +C++ M +A ALL +MK+ + + +N+L++ YA+ G ++
Sbjct: 236 SPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATK 295
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+++ M A+ PD +TYNV L + A R+ +EM+R G + D T++ LA
Sbjct: 296 VVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADAC 355
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
+ A R L+E+ + L + +I + G L +
Sbjct: 356 FKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDV 415
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
I+Y +I ++ A E D N ++ KE R E A+ L +
Sbjct: 416 ITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQS 475
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 418
+RG P+ ++ Y + + + A+ ++ I+ K PS T T ++
Sbjct: 476 PPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEK------KLTPSISTYNTLIK 528
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 107/244 (43%), Gaps = 2/244 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
NH T+ L++ +C + A + L M+ L ++ +N+L+ + + G + A++
Sbjct: 203 NHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALL 262
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
MK + P TYN + A A + I A +V+E M +G W T++ LA+ +
Sbjct: 263 ARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLW-TYNVLAAGLCQ 321
Query: 242 AGLFEKAERALKELENRNA-HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
AG ++A R E+E D+ Y L + S+ R+ +R +
Sbjct: 322 AGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLV 381
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
++ +I+ L +L GA C + D+ N +I A+ K G + A L +
Sbjct: 382 THNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEM 441
Query: 361 RRRG 364
RRG
Sbjct: 442 VRRG 445
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 148/370 (40%), Gaps = 11/370 (2%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +L + K + A LLE+M+E + + + N ++ K G E + +
Sbjct: 346 VTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNK 405
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + PD TYN + A +I+ A +++EM R G + D T + + +
Sbjct: 406 MADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRG-LKLDTFTLNTVLYNLCKEK 464
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS-Y 302
+E+A+ L+ R D +Y ++ Y + N R+W + + T +IS Y
Sbjct: 465 RYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEM-IEKKLTPSISTY 523
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+I+ L + L A E D N++I AY KEG LENA + +
Sbjct: 524 NTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVE 583
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ 422
P+ T + NG + A+ E ++ G+ T T ++ +
Sbjct: 584 NSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKV------DVITYNTLIQTMCK 637
Query: 423 EKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPV--MLRRLKMEKVEVSEAS 480
+ DVD A F ++ + ++ + AGRT ML +L S
Sbjct: 638 DGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFS 697
Query: 481 KKLLEAICVE 490
LL+ V+
Sbjct: 698 SPLLKPSSVD 707
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 100/243 (41%), Gaps = 36/243 (14%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ ++YG+++ Y KE +E A L ++M E L S +N+L+ ++ G ++ +
Sbjct: 484 DEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKL 543
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
E+ ++PD TYN+ + A D+ A + +M + D T + L +
Sbjct: 544 NELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENS-FKPDVVTCNTLMNGLCL 602
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G K ++ALK E+ + + G +V I+
Sbjct: 603 NG---KLDKALKLFES----------------WVEKGKKVDV----------------IT 627
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +IQ + D+ A F + E+ D NV++ A ++ GR E A+ + +
Sbjct: 628 YNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLA 687
Query: 362 RRG 364
G
Sbjct: 688 ESG 690
>gi|297737955|emb|CBI27156.3| unnamed protein product [Vitis vinifera]
Length = 625
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 148/377 (39%), Gaps = 53/377 (14%)
Query: 94 AIHLDLVAKVQGIDA---------AENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKA 142
+ H D++ IDA AE+ +++L E TY LL YC + EKA
Sbjct: 201 SFHPDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKA 260
Query: 143 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 202
EA+ +M++ S++ +N+ + K G +K I + MK P + TY + +
Sbjct: 261 EAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINL 320
Query: 203 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 262
+ A +V EM R + + TF+ L + + GL EKAE ++L+
Sbjct: 321 YGKASKSYMALKVFHEM-RSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEP 379
Query: 263 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 322
D+ AY L+ Y + G FP GA + F
Sbjct: 380 DVYAYNALMEAYSRAG---------------FPY--------------------GAAEIF 404
Query: 323 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 382
+ D N+M+ AY + G E+A+ + E +R G P K+ + Y R
Sbjct: 405 SLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRA 464
Query: 383 GDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDD 442
G + C E+ ++ G K P + + + + + + + E L ++K
Sbjct: 465 GKV---AKC-EEIVNQMHKSGIK--PDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYP 518
Query: 443 LGVEVFEPLIRTYAAAG 459
+ + LI Y AG
Sbjct: 519 ADISTYNILINIYGRAG 535
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 126/334 (37%), Gaps = 39/334 (11%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL--PETSKNHLTYGSLLN 131
A+++ E M++ + + + ++L K A F ++ + N T+ +L+N
Sbjct: 295 AVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVN 354
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ +E + EKAE + E+++E L +N+LM Y++ G P I M+ P
Sbjct: 355 AFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEP 414
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D +YN+ + A A+ V E MKR G + + L S Y AG K E
Sbjct: 415 DRASYNIMVDAYGRAGLHEDAQAVFEVMKRLG-ITPTMKSHMLLLSAYSRAGKVAKCEEI 473
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
+ ++ D ++ LYG+ G ++
Sbjct: 474 VNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKM---------------------------- 505
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
E+ E G DI N++I Y + G EEL R P+ T
Sbjct: 506 -------EEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVT 558
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAIDTG-RGDGG 404
W Y R ++ E+ ID G DGG
Sbjct: 559 WTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGG 592
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 78/197 (39%), Gaps = 1/197 (0%)
Query: 187 SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE 246
SS PD YN+ + A + AE E+ + R T++ L Y +GL E
Sbjct: 200 SSFHPDVICYNLLIDAYGQKSLYKKAESTYLEL-LEARCVPTEDTYALLLKAYCTSGLLE 258
Query: 247 KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI 306
KAE E+ Y I + G+ + I+ ++ + +Y +I
Sbjct: 259 KAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLI 318
Query: 307 QVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD 366
+ A K F E S +I ++ A+A+EG E AEE+ E+ + G +
Sbjct: 319 NLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLE 378
Query: 367 PNAKTWEIFSDYYLRNG 383
P+ + + Y R G
Sbjct: 379 PDVYAYNALMEAYSRAG 395
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 161/368 (43%), Gaps = 15/368 (4%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY L++ C + EKA LL +M E L + + +N+L+ Y K G E +++ M
Sbjct: 360 TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM 419
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
++ + P++ TYN ++ N + A V+ +M + +V D T+++L +G
Sbjct: 420 ESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKM-LERKVLPDVVTYNSLIDGQCRSGN 477
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
F+ A R L + +R D Y +I ++ + E ++ SL N + Y
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+I + A ++ S + N +I +G+L+ A L+E+ + G
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 597
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 424
P T I L++GD A ++ + +G P + T TF++ + +E
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTK------PDAHTYTTFIQTYCREG 651
Query: 425 DVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPV--MLRRLKMEKVEVSEAS-- 480
+ AE + +++ + + LI+ Y G+T+ +L+R++ E S+ +
Sbjct: 652 RLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFL 711
Query: 481 ---KKLLE 485
K LLE
Sbjct: 712 SLIKHLLE 719
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 70/343 (20%), Positives = 129/343 (37%), Gaps = 55/343 (16%)
Query: 55 KWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFV 114
+W + L K A L +++E++G+N V
Sbjct: 497 QWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNV------------------------ 532
Query: 115 DLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP 174
+ Y +L++ YCK ++A +LEKM N +S+ FN+L+ G
Sbjct: 533 ---------VMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKL 583
Query: 175 EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSN 234
++ + ++M + P T + + L D A ++M G D T++
Sbjct: 584 KEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG-TKPDAHTYTT 642
Query: 235 LASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF 294
Y G AE + ++ DL Y LI YG G + + + + +R
Sbjct: 643 FIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG 702
Query: 295 PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAE 354
+ ++L++I+ L+ +K G +K G ++N+M +
Sbjct: 703 CEPSQHTFLSLIKHLLEMK--YGKQK-------GSEPELCAMSNMM--------EFDTVV 745
Query: 355 ELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
EL E+ PNAK++E G++++A EK D
Sbjct: 746 ELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVA----EKVFD 784
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 68/376 (18%), Positives = 139/376 (36%), Gaps = 31/376 (8%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
Y +LLN + + ++ + + +M E + + +N ++ Y K G+ E+ + ++
Sbjct: 185 CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI 244
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ + PD +TY + D+ A +V EM G + +++L A
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKG-CRRNEVAYTHLIHGLCVARR 303
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
++A ++++ + Y LI + SE + + + +Y
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+I L + A + + ++ N +I Y K G +E+A ++ E R
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID--------------TGRGDGGKW---- 406
PN +T+ Y ++ K A+ L K ++ G+ G +
Sbjct: 424 LSPNTRTYNELIKGYCKSNVHK-AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 407 -----------VPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 455
VP T + + + K V+ A + L++ + V ++ LI Y
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542
Query: 456 AAAGRTSPVMLRRLKM 471
AG+ L KM
Sbjct: 543 CKAGKVDEAHLMLEKM 558
>gi|414888268|tpg|DAA64282.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 868
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 159/364 (43%), Gaps = 22/364 (6%)
Query: 23 EALYDRLFKKGSSDVSVRQQLNQFLKS-KKRVFKWEVGDTLKKLRDRKLYYPALKLSENM 81
E+L DRL S++ R + + L++ + R+ + ++ R + +L+L + M
Sbjct: 75 ESLIDRL-----SNLPPRGSIARCLETARHRLTLQDFAAVYREFSRRGDWQRSLRLFKYM 129
Query: 82 EKRGMNKTVSDQAIHLDLVAKV--QG---IDAAENYFVDLPETSKNHLTYGSLLNCYCKE 136
+++ + D+ IH ++ + QG +D F DLP S+ L+Y SL+ Y +
Sbjct: 130 QRQSWCR--PDEHIHAIVIGVLGRQGPALLDKCLEVFHDLPAESRTALSYTSLIAAYARN 187
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP----EKIPAIIQEMK---ASSI 189
+ E+A ALL++MK + ++ +N+++ A+ P + + + EM+ + S+
Sbjct: 188 ALHEEARALLDQMKATGVAPTAATYNTVLAACARATDPPVPFDMLLGLFAEMRHDASPSV 247
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
PD TYN + A A + +E ++ M G V+ D ++ ++ + AG +A
Sbjct: 248 RPDLTTYNTLLAAAAVRSLADQSEMLLHTMLEAG-VSPDTVSYRHIVDAFASAGNLSRAA 306
Query: 250 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 309
E+ D SAY L+ + + G ++ + R ++ +Y ++ +
Sbjct: 307 ELFSEMAATGHTADASAYLGLMEAHTRVGATADAVAVLRQMQADGCAPTAATYRVLLDLY 366
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
G + F+E + D NV+ + G + EL + G P+
Sbjct: 367 GRQGRFDGVRQLFREMRTAVPP-DTATYNVLFRVFGDGGFFKEVVELFHDMLKTGVQPDM 425
Query: 370 KTWE 373
T E
Sbjct: 426 VTCE 429
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 131/349 (37%), Gaps = 51/349 (14%)
Query: 89 TVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLNCYCKELMTEKAEALL 146
TVS + I +D A + A F ++ T + + Y L+ + + T A A+L
Sbjct: 286 TVSYRHI-VDAFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHTRVGATADAVAVL 344
Query: 147 EKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR----- 201
+M+ ++ + L+ LY + G + + + +EM+ +++ PD+ TYNV R
Sbjct: 345 RQMQADGCAPTAATYRVLLDLYGRQGRFDGVRQLFREMR-TAVPPDTATYNVLFRVFGDG 403
Query: 202 -----------------------------ALAAVNDISG-AERVIEEMKRDGRV-AADWT 230
A + G A V+E M R+G V AD
Sbjct: 404 GFFKEVVELFHDMLKTGVQPDMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTAD-- 461
Query: 231 TFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
++ L A ++E+A A + + L Y L Y + G E I+ +
Sbjct: 462 AYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETYNALAFAYARGGLFQEAEAIFSRM 521
Query: 291 RLAFPNTANI-----SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 345
N A I S+ +I+ L A K + E D R ++ AY
Sbjct: 522 S----NNAGIQKSKDSFDALIEAYCQGSRLDDAVKAYMEMRKSRFNPDERSLEGVLNAYC 577
Query: 346 KEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
G ++ ++E E + P+ + + Y RN A D LE+
Sbjct: 578 IAGVIDESKEQFEELQSSVTMPSVIAYCMMLSLYARNDRWTDAYDLLEE 626
>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
Length = 740
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 143/342 (41%), Gaps = 18/342 (5%)
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 187
SL+ + K+ +KA L +M E + + NS++ K +K +I+Q+M S
Sbjct: 53 SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 112
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
I PD +TY++ + L + AERV+E+M G + T+++L Y +G++ +
Sbjct: 113 GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAG-TRPNSITYNSLIHGYSISGMWNE 171
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 307
+ R K++ + + I + G +E I+ S+ L P ISY M+
Sbjct: 172 SVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLH 231
Query: 308 VLVNLKD--LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
D L F + + V N++I AYA+ G ++ A + E + +G
Sbjct: 232 GYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGM 291
Query: 366 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSET-----IRTFMRHF 420
P+ T+ R G + A+ +D G VP SE I+ H
Sbjct: 292 IPDTVTFATVISSLCRIGRLDDALHKFNHMVDIG-------VPPSEAVYGCLIQGCCNHG 344
Query: 421 EQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTS 462
E V E E++ K + GV+ F +I GR +
Sbjct: 345 EL---VKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVA 383
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/361 (19%), Positives = 151/361 (41%), Gaps = 42/361 (11%)
Query: 79 ENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLNCYCKE 136
E ME+ + K + +I +L K++ +D AE+ + ++ + + TY +++ CK
Sbjct: 73 EMMEQGVLPKILICNSIIKEL-CKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKS 131
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 196
+KAE +LE+M E +S+ +NSL+ Y+ +G + + ++M + ++P
Sbjct: 132 KAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNC 191
Query: 197 NVWMRALAAVNDISGAERVIEEMKRDGR-------------------------------- 224
N ++ AL + A+ + + M G
Sbjct: 192 NSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLM 251
Query: 225 ----VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
+A + F+ L + Y G+ +KA ++++N+ D + +I+ + G L
Sbjct: 252 LTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRL 311
Query: 281 SE-VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE-WESGCATYDIRVTN 338
+ +++ + + P + + Y +IQ N +L A++ E ++ +
Sbjct: 312 DDALHKFNHMVDIGVPPSEAV-YGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 370
Query: 339 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 398
+I KEGR+ +++ + + G PN T+ + Y G+M+ A L+
Sbjct: 371 SIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 430
Query: 399 G 399
G
Sbjct: 431 G 431
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 96/211 (45%), Gaps = 3/211 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL + +M +G+ T +I L + + + AA+ F ++ E T+ + TYG +L
Sbjct: 455 ALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLG 514
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C+ T++A LLEK+ +N+ F + FN +++ K G ++ + + ++P
Sbjct: 515 GLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVP 574
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ TY++ + L A+ + +++ G A+D +++ + + KA
Sbjct: 575 NIQTYSMMITNLIKEESYEEADNLFISVEKSGH-ASDSRLLNHIVRMLLNKAEVAKASNY 633
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSE 282
L + N + S L +L+ + G E
Sbjct: 634 LSIIGENNLTLEASTISLLASLFSREGKYRE 664
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/263 (19%), Positives = 103/263 (39%), Gaps = 3/263 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +T+ SL+ YC E+A ALL+ M + + + + +L+ Y K G + +
Sbjct: 400 NVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVF 459
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
++M + P S Y++ + L + A+++ EM G + T L +
Sbjct: 460 RDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGL-CR 518
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI- 300
++A L++L N D+ + +I+ + G E ++ ++ + NI
Sbjct: 519 NNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAIS-TYGLVPNIQ 577
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
+Y MI L+ + A+ F E D R+ N ++ + + A
Sbjct: 578 TYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSII 637
Query: 361 RRRGADPNAKTWEIFSDYYLRNG 383
A T + + + R G
Sbjct: 638 GENNLTLEASTISLLASLFSREG 660
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 98/266 (36%), Gaps = 48/266 (18%)
Query: 115 DLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP 174
D+P + + S++N CKE + + +++ M + + + FNSLM Y G+
Sbjct: 360 DIPPPGVKY--FSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNM 417
Query: 175 EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSN 234
E+ A++ M + I P+ Y Y + I A V +M G S
Sbjct: 418 EEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPT-----SV 472
Query: 235 LASIYVEAGLFE-----KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS 289
L SI + GLF+ A++ E+ + Y ++ + E +
Sbjct: 473 LYSIILH-GLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEK 531
Query: 290 LRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGR 349
L +N+K +DI N++I A K GR
Sbjct: 532 L-----------------FAMNVK------------------FDIITFNIVISAMFKVGR 556
Query: 350 LENAEELKERARRRGADPNAKTWEIF 375
+ A+EL + G PN +T+ +
Sbjct: 557 RQEAKELFDAISTYGLVPNIQTYSMM 582
>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
Length = 808
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 143/342 (41%), Gaps = 18/342 (5%)
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 187
SL+ + K+ +KA L +M E + + NS++ K +K +I+Q+M S
Sbjct: 139 SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 198
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
I PD +TY++ + L + AERV+E+M G + T+++L Y +G++ +
Sbjct: 199 GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAG-TRPNSITYNSLIHGYSISGMWNE 257
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 307
+ R K++ + + I + G +E I+ S+ L P ISY M+
Sbjct: 258 SVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLH 317
Query: 308 VLVNLKD--LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
D L F + + V N++I AYA+ G ++ A + E + +G
Sbjct: 318 GYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGM 377
Query: 366 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSET-----IRTFMRHF 420
P+ T+ R G + A+ +D G VP SE I+ H
Sbjct: 378 IPDTVTFATVISSLCRIGRLDDALHKFNHMVDIG-------VPPSEAVYGCLIQGCCNHG 430
Query: 421 EQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTS 462
E V E E++ K + GV+ F +I GR +
Sbjct: 431 EL---VKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVA 469
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/361 (19%), Positives = 151/361 (41%), Gaps = 42/361 (11%)
Query: 79 ENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLNCYCKE 136
E ME+ + K + +I +L K++ +D AE+ + ++ + + TY +++ CK
Sbjct: 159 EMMEQGVLPKILICNSIIKEL-CKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKS 217
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 196
+KAE +LE+M E +S+ +NSL+ Y+ +G + + ++M + ++P
Sbjct: 218 KAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNC 277
Query: 197 NVWMRALAAVNDISGAERVIEEMKRDGR-------------------------------- 224
N ++ AL + A+ + + M G
Sbjct: 278 NSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLM 337
Query: 225 ----VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
+A + F+ L + Y G+ +KA ++++N+ D + +I+ + G L
Sbjct: 338 LTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRL 397
Query: 281 SE-VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE-WESGCATYDIRVTN 338
+ +++ + + P + + Y +IQ N +L A++ E ++ +
Sbjct: 398 DDALHKFNHMVDIGVPPSEAV-YGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 456
Query: 339 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 398
+I KEGR+ +++ + + G PN T+ + Y G+M+ A L+
Sbjct: 457 SIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 516
Query: 399 G 399
G
Sbjct: 517 G 517
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 98/213 (46%), Gaps = 3/213 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL + +M +G+ T +I L + + + AA+ F ++ E T+ + TYG +L
Sbjct: 541 ALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLG 600
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C+ T++A LLEK+ +N+ F + FN +++ K G ++ + + ++P
Sbjct: 601 GLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVP 660
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ TY++ + L A+ + +++ G A+D +++ + + KA
Sbjct: 661 NIQTYSMMITNLIKEESYEEADNLFISVEKSGH-ASDSRLLNHIVRMLLNKAEVAKASNY 719
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVY 284
L + N + S L +L+ + G + ++
Sbjct: 720 LSIIGENNLTLEASTISLLASLFSREGMIKGLF 752
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 105/266 (39%), Gaps = 3/266 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +T+ SL+ YC E+A ALL+ M + + + + +L+ Y K G + +
Sbjct: 486 NVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVF 545
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
++M + P S Y++ + L + A+++ EM G + T L +
Sbjct: 546 RDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGL-CR 604
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI- 300
++A L++L N D+ + +I+ + G E ++ ++ + NI
Sbjct: 605 NNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAIS-TYGLVPNIQ 663
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
+Y MI L+ + A+ F E D R+ N ++ + + A
Sbjct: 664 TYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSII 723
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMK 386
A T + + + R G +K
Sbjct: 724 GENNLTLEASTISLLASLFSREGMIK 749
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 98/266 (36%), Gaps = 48/266 (18%)
Query: 115 DLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP 174
D+P + + S++N CKE + + +++ M + + + FNSLM Y G+
Sbjct: 446 DIPPPGVKY--FSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNM 503
Query: 175 EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSN 234
E+ A++ M + I P+ Y Y + I A V +M G S
Sbjct: 504 EEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPT-----SV 558
Query: 235 LASIYVEAGLFE-----KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS 289
L SI + GLF+ A++ E+ + Y ++ + E +
Sbjct: 559 LYSIILH-GLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEK 617
Query: 290 LRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGR 349
L +N+K +DI N++I A K GR
Sbjct: 618 L-----------------FAMNVK------------------FDIITFNIVISAMFKVGR 642
Query: 350 LENAEELKERARRRGADPNAKTWEIF 375
+ A+EL + G PN +T+ +
Sbjct: 643 RQEAKELFDAISTYGLVPNIQTYSMM 668
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 127/287 (44%), Gaps = 8/287 (2%)
Query: 108 AAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLM 165
+A+ Y ++ E N + L+N YCK+ +A + M + + + + LM
Sbjct: 540 SADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLM 599
Query: 166 TLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRV 225
K + I +EM+ I PD ++Y V + + + ++ A + +EM +G +
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG-L 658
Query: 226 AADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 285
+ ++ L + +G EKA+ L E+ + H + Y +I Y ++G+L+E +R
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFR 718
Query: 286 IWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 345
++ ++L + Y ++ L D+ A F + GCA+ N +I
Sbjct: 719 LFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCAS-STAPFNALINWVF 777
Query: 346 KEGRLENAEELKER----ARRRGADPNAKTWEIFSDYYLRNGDMKLA 388
K G+ E E+ R + R PN T+ I DY + G+++ A
Sbjct: 778 KFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAA 824
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 127/330 (38%), Gaps = 71/330 (21%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y SL+ YC+E + LL +MK+ N+ S + +++ +G + I++EM
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI 444
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL---------- 235
AS P+ Y ++ + A RV++EMK G +A D +++L
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG-IAPDIFCYNSLIIGLSKAKRM 503
Query: 236 -------------------------ASIYVEAGLFEKAERALKEL--------------- 255
S Y+EA F A++ +KE+
Sbjct: 504 DEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGL 563
Query: 256 -----------ENRNAHR---------DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
E +A+R D Y L+ + + + I+R +R
Sbjct: 564 INEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI 623
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEE 355
SY +I L ++ A F E T ++ + N+++G + + G +E A+E
Sbjct: 624 APDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKE 683
Query: 356 LKERARRRGADPNAKTWEIFSDYYLRNGDM 385
L + +G PNA T+ D Y ++GD+
Sbjct: 684 LLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 90/460 (19%), Positives = 181/460 (39%), Gaps = 96/460 (20%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
ALKL E+M +G+ + +D + K++ ++ A++ V++ S ++ TY L++
Sbjct: 261 ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLID 320
Query: 132 --------------------------------CYC---KELMTEKAEALLEKMKELNLGF 156
C C KE + EKA+AL + M L
Sbjct: 321 GLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIP 380
Query: 157 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
+ + SL+ Y + + + ++ EMK +I+ YTY ++ + + D+ GA ++
Sbjct: 381 QAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIV 440
Query: 217 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 276
+EM G + ++ L +++ F A R LKE++ + D+ Y LI +
Sbjct: 441 KEMIASG-CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499
Query: 277 TGNLSE-----VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESG-- 328
+ E V + L+ PN +Y I + + A+K KE E G
Sbjct: 500 AKRMDEARSFLVEMVENGLK---PNA--FTYGAFISGYIEASEFASADKYVKEMRECGVL 554
Query: 329 ----------------------CATY----------DIRVTNVMIGAYAKEGRLENAEEL 356
C+ Y D + V++ K ++++AEE+
Sbjct: 555 PNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEI 614
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTF 416
R +G P+ ++ + + + + G+M+ A ++ ++ G P+
Sbjct: 615 FREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG------LTPNVIIYNML 668
Query: 417 MRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYA 456
+ F + +++ A K+ +D++ V+ P TY
Sbjct: 669 LGGFCRSGEIEKA-------KELLDEMSVKGLHPNAVTYC 701
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 143/337 (42%), Gaps = 13/337 (3%)
Query: 106 IDAAENYFVDL--PETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNS 163
+D AE F ++ + + +YG L+N + K +KA ++ ++M E L + + +N
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 164 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
L+ + ++G EK ++ EM + P++ TY + D++ A R+ +EMK G
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727
Query: 224 RVAADWTTFSNLASIYVEAGLFEKAERALKEL--ENRNAHRDLSAYQFLITL---YGQTG 278
V D ++ L ERA+ + + + LI +G+T
Sbjct: 728 LV-PDSFVYTTLVD---GCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTE 783
Query: 279 NLSEVY-RIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVT 337
+EV R+ F +++Y MI L +L A++ F + ++ +
Sbjct: 784 LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 843
Query: 338 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
++ Y K GR + + A G +P+ + + + +L+ G A+ +++
Sbjct: 844 TSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFA 903
Query: 398 TGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 434
D G + S T R + F + +++ AE +E
Sbjct: 904 KNAVDDGCKL-SISTCRALLSGFAKVGEMEVAEKVME 939
>gi|125580966|gb|EAZ21897.1| hypothetical protein OsJ_05550 [Oryza sativa Japonica Group]
Length = 595
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 111/262 (42%), Gaps = 2/262 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N Y + L+ K TEKA + ++MK ++ F ++ +Y K P +
Sbjct: 244 NATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVF 303
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EMK+ P+ TY + A A AE V EEM++ G D ++ L Y
Sbjct: 304 NEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGH-EPDVYAYNALMEAYSR 362
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
AGL + A +++ D ++Y L+ YG+ G + ++ L+ + S
Sbjct: 363 AGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKS 422
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
++ ++ + E+ + T D N M+ AYA+ GRL++ E L
Sbjct: 423 HMLLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLFAAME 482
Query: 362 RRGADPNAKTWEIFSDYYLRNG 383
RRG D + T+ + + Y R G
Sbjct: 483 RRG-DADVGTYNVAVNAYGRAG 503
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 122/317 (38%), Gaps = 8/317 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N T+ ++N Y K + + +MK + + + +L+ +A+ G EK +
Sbjct: 279 NTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVF 338
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+EM+ + PD Y YN M A + GA + M+ G D +++ L Y
Sbjct: 339 EEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMG-CEPDRASYNILVDAYGR 397
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
AGL E AE +EL+ R + ++ L+ + ++GN + + L + +
Sbjct: 398 AGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTPDTFA 457
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
M+ L E+ F E D+ NV + AY + G + E
Sbjct: 458 LNAMLNAYARAGRLDDMERLFAAMERR-GDADVGTYNVAVNAYGRAGYVGRMEAAFAAVA 516
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
RG + TW Y R + V +E+ +D G P + T R +
Sbjct: 517 ARGLAADVVTWTARMGAYARRKEYGRCVGMVEEMVDAG------CYPDAGTARVLLAACS 570
Query: 422 QEKDVDGAEGFLEILKK 438
E+ V+ + + K
Sbjct: 571 DERQVEQVTAIVRSMHK 587
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/337 (19%), Positives = 139/337 (41%), Gaps = 10/337 (2%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+ Y L+ Y K+ KAE++ + E + + L+ Y G + +I E
Sbjct: 176 ICYNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISE 235
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ I P++ YN ++ L A V + MKR+ R A+ TF+ + ++Y +A
Sbjct: 236 MREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRE-RCRANTETFTLMINVYGKAK 294
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
+ + E+++ ++ Y L+ + + G + ++ ++ A + ++
Sbjct: 295 QPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQA-GHEPDVYAY 353
Query: 304 NMIQVLVNLKDLP-GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
N + + LP GA + F + D N+++ AY + G E+AE + E ++
Sbjct: 354 NALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQ 413
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ 422
RG P K+ + + R+G+ + + + +G P + + + + +
Sbjct: 414 RGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSG------LTPDTFALNAMLNAYAR 467
Query: 423 EKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
+D E +++ D V + + Y AG
Sbjct: 468 AGRLDDMERLFAAMERR-GDADVGTYNVAVNAYGRAG 503
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 156/378 (41%), Gaps = 23/378 (6%)
Query: 77 LSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE-TSKNHLTYGSLLNCYCK 135
L E +E++ V+ A+ V + + +AAE Y LP N +TY S+++ +CK
Sbjct: 311 LQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK 370
Query: 136 ELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYT 195
+ + AE + M F +L+ Y + ++ EM ++ ++ T
Sbjct: 371 QDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVT 430
Query: 196 YNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 255
YN + V D++ A + ++M G V D T + L + G + A K +
Sbjct: 431 YNTLIHGFCLVGDLNAALDLSQQMISSG-VCPDIVTCNTLLDGLCDNGKLKDALEMFKAM 489
Query: 256 ENRNAHRDLS-----------AYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISY 302
+ D S Y LI G E ++ + R P+T I+Y
Sbjct: 490 QKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDT--ITY 547
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+MI L L A + F S + ++ N +I Y K GR+++ EL R
Sbjct: 548 SSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGR 607
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ 422
RG +A + + + G++ A+D ++ I +G P + TIR + F
Sbjct: 608 RGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSG------VYPDTITIRNMLTGFWS 661
Query: 423 EKDVDGAEGFLEILKKAV 440
+++++ A LE L+ +V
Sbjct: 662 KEELERAVAMLEDLQMSV 679
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/313 (20%), Positives = 123/313 (39%), Gaps = 43/313 (13%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+T+ +LL+ C + +A L ++ ++ + F +LM + G + A++
Sbjct: 152 VTFTTLLHGLCLDHRVSEALDLFHQICRPDV----LTFTTLMNGLCREGRVVEAVALLDR 207
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGA--------------------ERVIEEMKRDG 223
M + + PD TY ++ + + D A +I+ + +DG
Sbjct: 208 MVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDG 267
Query: 224 R---------------VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQ 268
R + + T++ + + +G + A+R L+E+ R ++ Y
Sbjct: 268 RHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYN 327
Query: 269 FLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE 326
LI + + G E ++ + R PNT I+Y +MI L AE F
Sbjct: 328 ALINAFVKEGKFFEAAELYDEMLPRGIIPNT--ITYNSMIDGFCKQDRLDAAEDMFYLMA 385
Query: 327 SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 386
+ + D+ +I Y R+++ EL RRG N T+ + GD+
Sbjct: 386 TKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLN 445
Query: 387 LAVDCLEKAIDTG 399
A+D ++ I +G
Sbjct: 446 AALDLSQQMISSG 458
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 138/347 (39%), Gaps = 23/347 (6%)
Query: 109 AENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMT 166
+ N F+++ + N +TY ++ +C A+ LL++M E + + + +N+L+
Sbjct: 272 SHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALIN 331
Query: 167 LYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA 226
+ K G + + EM I+P++ TYN + + + AE + M G +
Sbjct: 332 AFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKG-CS 390
Query: 227 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
D TF+ L Y A + L E+ R + Y LI + G+L+ +
Sbjct: 391 PDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDL 450
Query: 287 WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESG-----------CATYDIR 335
+ + + ++ ++ L + L A + FK + D+
Sbjct: 451 SQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVL 510
Query: 336 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 395
N++I EG+ AEEL E RG P+ T+ D + L++A
Sbjct: 511 TYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR-------LDEA 563
Query: 396 IDTGRGDGGK-WVPSSETIRTFMRHFEQEKDV-DGAEGFLEILKKAV 440
G K + P+ T T + + + V DG E F E+ ++ +
Sbjct: 564 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGI 610
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/405 (19%), Positives = 158/405 (39%), Gaps = 27/405 (6%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK---NHLTYGSLL 130
A+ L + M + G+ +D + K+ +A N + E S N + Y +++
Sbjct: 201 AVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAII 260
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
+ CK+ + L +M++ + + + +N ++ + +G ++QEM I
Sbjct: 261 DGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKIS 320
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
P+ TYN + A A + +EM G + + T++++ + + + AE
Sbjct: 321 PNVVTYNALINAFVKEGKFFEAAELYDEMLPRG-IIPNTITYNSMIDGFCKQDRLDAAED 379
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQV 308
+ + D+ + LI Y + + + + R NT ++Y +I
Sbjct: 380 MFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANT--VTYNTLIHG 437
Query: 309 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR------ 362
+ DL A ++ S DI N ++ G+L++A E+ + ++
Sbjct: 438 FCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLD 497
Query: 363 -----RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 417
G +P+ T+ I + G A + E+ G VP + T + +
Sbjct: 498 ASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRG------IVPDTITYSSMI 551
Query: 418 RHFEQEKDVDGA-EGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 461
++ +D A + F+ + K+ V F LI Y AGR
Sbjct: 552 DGLCKQSRLDEATQMFVSMGSKSFSP-NVVTFNTLINGYCKAGRV 595
>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
Length = 708
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 157/368 (42%), Gaps = 17/368 (4%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS---KNHLTYGSLL 130
A +L E M +RG V +D + K + A F+ L + N TY +++
Sbjct: 313 AFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMI 372
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
N YCKE +AE LL +M+E L ++ + +L+ + K G+ + ++ M
Sbjct: 373 NGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFS 432
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
P+ YTYN + L + A R++ ++ G + AD T++ L S++ ++
Sbjct: 433 PNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHG-LQADGVTYTILMSVHCRQADTNRSLV 491
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW-RSLRLAFPNTANISYLNMIQVL 309
++ D+ +Y LI+ + + + E R++ ++ L T +Y +MI
Sbjct: 492 FFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKK-TYTSMICGY 550
Query: 310 VNLKDLPGAEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 368
+ A K F+ + GCA D +I KE +L++A L + +G P
Sbjct: 551 CRYGNTSLAVKLFQRMSNHGCAP-DSITYGALISGLCKESKLDDARNLYDAMMDKGLSPC 609
Query: 369 AKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDG 428
T + Y + D A++ L+ R + +W+ T+ T +R E +D
Sbjct: 610 EVTRLTLAYEYCKKDDSSTAINVLD------RLEKRQWI---RTVNTLVRKLCSEGKLDM 660
Query: 429 AEGFLEIL 436
A F L
Sbjct: 661 AALFFHKL 668
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 80/406 (19%), Positives = 157/406 (38%), Gaps = 38/406 (9%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A+ + M+ +G+ + LD+ + ++ AEN FV++ + S + +++ ++
Sbjct: 173 AVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVV 232
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C +AE L M E + ++ + + G+ ++ +M + P
Sbjct: 233 ACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAP 292
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ + + L I A ++EEM R G + T + L + G EKA R
Sbjct: 293 NVINFTALINGLCKQGSIKQAFELLEEMVRRGW-KPNVYTHTTLIDGLCKKGWTEKAFRL 351
Query: 252 LKELENRNAHR-DLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYL----- 303
+L + ++ ++ Y +I Y + L+ + ++ PNT + L
Sbjct: 352 FLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHC 411
Query: 304 ---NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
N ++ L DL G E + +I N +I K+G L+ A L +
Sbjct: 412 KVGNFVRAY-ELMDLMGKEG---------FSPNIYTYNAIIDGLCKKGSLDEAYRLLNKV 461
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 420
G + T+ I + R D ++ K + G + P + T + F
Sbjct: 462 SVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVG------FTPDIHSYTTLISXF 515
Query: 421 EQEKDVDGAEGFLEILKKAVDDLGV----EVFEPLIRTYAAAGRTS 462
++K + +E E +AV LG+ + + +I Y G TS
Sbjct: 516 CRQKQMKESERLFE---EAV-SLGLIPTKKTYTSMICGYCRYGNTS 557
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 47/248 (18%), Positives = 98/248 (39%), Gaps = 6/248 (2%)
Query: 140 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 199
++A ++ +M+ L S+ N ++ + G E + EM + PD ++ +
Sbjct: 171 KEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLM 230
Query: 200 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 259
+ A + + AE+ + M G + D T + + + + G + ++
Sbjct: 231 VVACCNMGRVLEAEKWLNAMVERGFI-VDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMG 289
Query: 260 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 317
++ + LI + G++ + + + + R PN ++ +I L
Sbjct: 290 LAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNV--YTHTTLIDGLCKKGWTEK 347
Query: 318 AEKCF-KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 376
A + F K S ++ MI Y KE +L AE L R + +G PN T+
Sbjct: 348 AFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLI 407
Query: 377 DYYLRNGD 384
D + + G+
Sbjct: 408 DGHCKVGN 415
>gi|115444491|ref|NP_001046025.1| Os02g0170000 [Oryza sativa Japonica Group]
gi|49388067|dbj|BAD25179.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535556|dbj|BAF07939.1| Os02g0170000 [Oryza sativa Japonica Group]
Length = 397
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 111/262 (42%), Gaps = 2/262 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N Y + L+ K TEKA + ++MK ++ F ++ +Y K P +
Sbjct: 46 NATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVF 105
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EMK+ P+ TY + A A AE V EEM++ G D ++ L Y
Sbjct: 106 NEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGH-EPDVYAYNALMEAYSR 164
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
AGL + A +++ D ++Y L+ YG+ G + ++ L+ + S
Sbjct: 165 AGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKS 224
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
++ ++ + E+ + T D N M+ AYA+ GRL++ E L
Sbjct: 225 HMLLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLFAAME 284
Query: 362 RRGADPNAKTWEIFSDYYLRNG 383
RRG D + T+ + + Y R G
Sbjct: 285 RRG-DADVGTYNVAVNAYGRAG 305
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 122/317 (38%), Gaps = 8/317 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N T+ ++N Y K + + +MK + + + +L+ +A+ G EK +
Sbjct: 81 NTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVF 140
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+EM+ + PD Y YN M A + GA + M+ G D +++ L Y
Sbjct: 141 EEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMG-CEPDRASYNILVDAYGR 199
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
AGL E AE +EL+ R + ++ L+ + ++GN + + L + +
Sbjct: 200 AGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTPDTFA 259
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
M+ L E+ F E D+ NV + AY + G + E
Sbjct: 260 LNAMLNAYARAGRLDDMERLFAAMERR-GDADVGTYNVAVNAYGRAGYVGRMEAAFAAVA 318
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
RG + TW Y R + V +E+ +D G P + T R +
Sbjct: 319 ARGLAADVVTWTARMGAYARRKEYGRCVGMVEEMVDAG------CYPDAGTARVLLAACS 372
Query: 422 QEKDVDGAEGFLEILKK 438
E+ V+ + + K
Sbjct: 373 DERQVEQVTAIVRSMHK 389
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/197 (19%), Positives = 82/197 (41%), Gaps = 1/197 (0%)
Query: 187 SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE 246
+ +P TY + +RA + AE VI EM+ G + + T ++ ++A E
Sbjct: 6 AQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMREHG-IPPNATVYNAYLDGLLKARCTE 64
Query: 247 KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI 306
KA + ++ + + +I +YG+ +++ ++ +Y ++
Sbjct: 65 KAVEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALV 124
Query: 307 QVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD 366
AE+ F+E + D+ N ++ AY++ G + A E+ + G +
Sbjct: 125 NAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCE 184
Query: 367 PNAKTWEIFSDYYLRNG 383
P+ ++ I D Y R G
Sbjct: 185 PDRASYNILVDAYGRAG 201
>gi|168012346|ref|XP_001758863.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690000|gb|EDQ76369.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 367
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 129/281 (45%), Gaps = 11/281 (3%)
Query: 122 NHLTYGSLLNCYCK-ELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+ +T +LL+ K +L E AE + K+KE + +N+L+++ ++ GH E+ +
Sbjct: 79 DEITLSTLLSGVGKTQLPVETAEKIFSKIKENGILPRVETYNTLLSVLSRGGHTERCKEL 138
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
EM+ ++P+ T+N + + A V + + D + T++ L +Y
Sbjct: 139 EIEMQRLEVVPNIITFNTLLMMHVQGGRLKEAAEVYQRI-LDAGLKPTVVTYTGLVQMYC 197
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR--LAFPNTA 298
A ++A E+ DL Y +I++YG+ G+ E ++R L+ PN
Sbjct: 198 RASKHKEAIEVFLEMRRVGCKPDLMIYSLMISVYGKAGSAEEAALVFRQLQNDGYIPNV- 256
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
+++ +IQ + F E SGC D+ + NVM+GAY + G A L
Sbjct: 257 -VTWCCLIQAFGWQGKMQEIGAFFNEMLASGCLP-DLTLYNVMMGAYGRYGHSVQAAILF 314
Query: 358 ERARRRGADPNAKTWEIFSDYYLRN---GDMKLAVDCLEKA 395
R + +G PNA +++ Y + D ++ +D + +A
Sbjct: 315 RRMQAQGISPNAVSYDTMIQAYCHSKQAADAQIVLDQMTRA 355
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 118/282 (41%), Gaps = 13/282 (4%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N TY +L + +T +A L ++M + FNS++ YA+ G +K +
Sbjct: 9 NGHTYTLVLGVLGRAGLTIQARELFDEMLSSGVEVGLHSFNSMIGAYARKGLFKKAWRMY 68
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVN-DISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
++M S I D T + + + + AE++ ++K +G + T++ L S+
Sbjct: 69 EDMVESGIQADEITLSTLLSGVGKTQLPVETAEKIFSKIKENG-ILPRVETYNTLLSVLS 127
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
G E+ + E++ ++ + L+ ++ Q G L E +++ + A +
Sbjct: 128 RGGHTERCKELEIEMQRLEVVPNIITFNTLLMMHVQGGRLKEAAEVYQRILDAGLKPTVV 187
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+Y ++Q+ A + F E GC D+ + ++MI Y K G E A + +
Sbjct: 188 TYTGLVQMYCRASKHKEAIEVFLEMRRVGCKP-DLMIYSLMISVYGKAGSAEEAALVFRQ 246
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMK---------LAVDCL 392
+ G PN TW + G M+ LA CL
Sbjct: 247 LQNDGYIPNVVTWCCLIQAFGWQGKMQEIGAFFNEMLASGCL 288
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 60/322 (18%), Positives = 120/322 (37%), Gaps = 41/322 (12%)
Query: 37 VSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIH 96
+ R+ ++ L S V + + L+ A ++ E+M + G+ +
Sbjct: 27 IQARELFDEMLSSGVEVGLHSFNSMIGAYARKGLFKKAWRMYEDMVESGIQADEITLSTL 86
Query: 97 LDLVAKVQ-GIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELN 153
L V K Q ++ AE F + E TY +LL+ + TE+ + L +M+ L
Sbjct: 87 LSGVGKTQLPVETAEKIFSKIKENGILPRVETYNTLLSVLSRGGHTERCKELEIEMQRLE 146
Query: 154 LGFSSMPFNSLMTLYAKTG------------------------------------HPEKI 177
+ + + FN+L+ ++ + G H E I
Sbjct: 147 VVPNIITFNTLLMMHVQGGRLKEAAEVYQRILDAGLKPTVVTYTGLVQMYCRASKHKEAI 206
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
+ EM+ PD Y++ + A V +++ DG + + T+ L
Sbjct: 207 EVFL-EMRRVGCKPDLMIYSLMISVYGKAGSAEEAALVFRQLQNDGYI-PNVVTWCCLIQ 264
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
+ G ++ E+ DL+ Y ++ YG+ G+ + ++R ++ +
Sbjct: 265 AFGWQGKMQEIGAFFNEMLASGCLPDLTLYNVMMGAYGRYGHSVQAAILFRRMQAQGISP 324
Query: 298 ANISYLNMIQVLVNLKDLPGAE 319
+SY MIQ + K A+
Sbjct: 325 NAVSYDTMIQAYCHSKQAADAQ 346
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 51/256 (19%), Positives = 108/256 (42%), Gaps = 15/256 (5%)
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
+ GR+ + T++ + + AGL +A E+ + L ++ +I Y + G
Sbjct: 2 QKGRLKPNGHTYTLVLGVLGRAGLTIQARELFDEMLSSGVEVGLHSFNSMIGAYARKGLF 61
Query: 281 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP--GAEKCFKEWESGCATYDIRVTN 338
+ +R++ + + I+ L+ + V LP AEK F + + + N
Sbjct: 62 KKAWRMYEDMVESGIQADEIT-LSTLLSGVGKTQLPVETAEKIFSKIKENGILPRVETYN 120
Query: 339 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 398
++ ++ G E +EL+ +R PN T+ +++ G +K A + ++ +D
Sbjct: 121 TLLSVLSRGGHTERCKELEIEMQRLEVVPNIITFNTLLMMHVQGGRLKEAAEVYQRILDA 180
Query: 399 GRGDGGKWVPSSETIRTFMRHF-EQEKDVDGAEGFLEILKKAV-DDLGVEVFEPLIRTYA 456
G P+ T ++ + K + E FLE+ + DL ++ +I Y
Sbjct: 181 G------LKPTVVTYTGLVQMYCRASKHKEAIEVFLEMRRVGCKPDL--MIYSLMISVYG 232
Query: 457 AAGRT--SPVMLRRLK 470
AG + ++ R+L+
Sbjct: 233 KAGSAEEAALVFRQLQ 248
>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
Length = 864
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 143/342 (41%), Gaps = 18/342 (5%)
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 187
SL+ + K+ +KA L +M E + + NS++ K +K +I+Q+M S
Sbjct: 195 SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 254
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
I PD +TY++ + L + AERV+E+M G + T+++L Y +G++ +
Sbjct: 255 GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAG-TRPNSITYNSLIHGYSISGMWNE 313
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 307
+ R K++ + + I + G +E I+ S+ L P ISY M+
Sbjct: 314 SVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLH 373
Query: 308 VLVNLKD--LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
D L F + + V N++I AYA+ G ++ A + E + +G
Sbjct: 374 GYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGM 433
Query: 366 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSET-----IRTFMRHF 420
P+ T+ R G + A+ +D G VP SE I+ H
Sbjct: 434 IPDTVTFATVISSLCRIGRLDDALHKFNHMVDIG-------VPPSEAVYGCLIQGCCNHG 486
Query: 421 EQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTS 462
E V E E++ K + GV+ F +I GR +
Sbjct: 487 EL---VKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVA 525
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/361 (19%), Positives = 151/361 (41%), Gaps = 42/361 (11%)
Query: 79 ENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLNCYCKE 136
E ME+ + K + +I +L K++ +D AE+ + ++ + + TY +++ CK
Sbjct: 215 EMMEQGVLPKILICNSIIKEL-CKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKS 273
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 196
+KAE +LE+M E +S+ +NSL+ Y+ +G + + ++M + ++P
Sbjct: 274 KAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNC 333
Query: 197 NVWMRALAAVNDISGAERVIEEMKRDGR-------------------------------- 224
N ++ AL + A+ + + M G
Sbjct: 334 NSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLM 393
Query: 225 ----VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
+A + F+ L + Y G+ +KA ++++N+ D + +I+ + G L
Sbjct: 394 LTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRL 453
Query: 281 SE-VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE-WESGCATYDIRVTN 338
+ +++ + + P + + Y +IQ N +L A++ E ++ +
Sbjct: 454 DDALHKFNHMVDIGVPPSEAV-YGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 512
Query: 339 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 398
+I KEGR+ +++ + + G PN T+ + Y G+M+ A L+
Sbjct: 513 SIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 572
Query: 399 G 399
G
Sbjct: 573 G 573
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 98/213 (46%), Gaps = 3/213 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL + +M +G+ T +I L + + + AA+ F ++ E T+ + TYG +L
Sbjct: 597 ALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLG 656
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C+ T++A LLEK+ +N+ F + FN +++ K G ++ + + ++P
Sbjct: 657 GLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVP 716
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ TY++ + L A+ + +++ G A+D +++ + + KA
Sbjct: 717 NIQTYSMMITNLIKEESYEEADNLFISVEKSGH-ASDSRLLNHIVRMLLNKAEVAKASNY 775
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVY 284
L + N + S L +L+ + G + ++
Sbjct: 776 LSIIGENNLTLEASTISLLASLFSREGMIKGLF 808
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 105/266 (39%), Gaps = 3/266 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +T+ SL+ YC E+A ALL+ M + + + + +L+ Y K G + +
Sbjct: 542 NVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVF 601
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
++M + P S Y++ + L + A+++ EM G + T L +
Sbjct: 602 RDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGL-CR 660
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI- 300
++A L++L N D+ + +I+ + G E ++ ++ + NI
Sbjct: 661 NNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAIS-TYGLVPNIQ 719
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
+Y MI L+ + A+ F E D R+ N ++ + + A
Sbjct: 720 TYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSII 779
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMK 386
A T + + + R G +K
Sbjct: 780 GENNLTLEASTISLLASLFSREGMIK 805
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 98/266 (36%), Gaps = 48/266 (18%)
Query: 115 DLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP 174
D+P + + S++N CKE + + +++ M + + + FNSLM Y G+
Sbjct: 502 DIPPPGVKY--FSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNM 559
Query: 175 EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSN 234
E+ A++ M + I P+ Y Y + I A V +M G S
Sbjct: 560 EEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKG-----VKPTSV 614
Query: 235 LASIYVEAGLFE-----KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS 289
L SI + GLF+ A++ E+ + Y ++ + E +
Sbjct: 615 LYSIILH-GLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEK 673
Query: 290 LRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGR 349
L +N+K +DI N++I A K GR
Sbjct: 674 L-----------------FAMNVK------------------FDIITFNIVISAMFKVGR 698
Query: 350 LENAEELKERARRRGADPNAKTWEIF 375
+ A+EL + G PN +T+ +
Sbjct: 699 RQEAKELFDAISTYGLVPNIQTYSMM 724
>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Vitis vinifera]
Length = 590
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 151/348 (43%), Gaps = 30/348 (8%)
Query: 115 DLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP 174
D P+++ L++ L+ Y MT+ A + E M+ L+ AK
Sbjct: 121 DDPDSNSQILSW--LVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLT 178
Query: 175 EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSN 234
+ + ++M ++P+ + +NV + A D+ AE+++ EM+ + D T++
Sbjct: 179 NMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEME-SRFIFPDLFTYNT 237
Query: 235 LASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF 294
L S+Y + G+ +A +E D+ Y LI + + G + E R++R + A
Sbjct: 238 LISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREINGAT 297
Query: 295 PNTANISYLNMIQVLVNLKDLPGAEKCFKEWE-----SGCATYDIRVTNVMIGAYAKEGR 349
PN +++Y +I + DL A + + E G TY N ++ +EG+
Sbjct: 298 PN--HVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTY-----NSILRKLCEEGK 350
Query: 350 LENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPS 409
+++A L R +P+ T + Y + GDM A+ +K ++ G P
Sbjct: 351 IKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLK------PD 404
Query: 410 SETIRTFMRHFEQEKDVDGAEGFL-EILKKAVDDLGVEVFEPLIRTYA 456
T + + F + +VD A+ FL E+L D G F P TY+
Sbjct: 405 QFTFKALIHGFCKLHEVDSAKEFLFEML-----DAG---FSPSYSTYS 444
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 156/381 (40%), Gaps = 10/381 (2%)
Query: 6 RFGRTKNIAKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKL 65
R G NI H+ L K G DV +QL ++S+ +TL L
Sbjct: 190 RVGVVPNI------HIFNVLIHACCKSG--DVEKAEQLLNEMESRFIFPDLFTYNTLISL 241
Query: 66 RDRK-LYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHL 124
+K ++Y AL + + ME+ G++ + + + + A F ++ + NH+
Sbjct: 242 YCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREINGATPNHV 301
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY +L++ YC+ E+A L E M+ L + +NS++ + G + ++ EM
Sbjct: 302 TYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEM 361
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ PD+ T N + A + D+ A +V ++M G + D TF L + +
Sbjct: 362 SERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAG-LKPDQFTFKALIHGFCKLHE 420
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+ A+ L E+ + S Y +L+ Y N V R+ L Y
Sbjct: 421 VDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRA 480
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+I+ L + + AE+ F + D V + AY K G+ A ++ + +R
Sbjct: 481 LIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRR 540
Query: 365 ADPNAKTWEIFSDYYLRNGDM 385
K + FS Y +G +
Sbjct: 541 LMITLKIYRCFSASYAGDGSI 561
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/308 (19%), Positives = 118/308 (38%), Gaps = 5/308 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
A+++ E+M G + + L+ +AK + + + + N + L++
Sbjct: 146 AIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIH 205
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK EKAE LL +M+ + +N+L++LY K G + I M+ + P
Sbjct: 206 ACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSP 265
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D TYN + + A R+ E+ + T++ L Y E+A R
Sbjct: 266 DIVTYNSLIYGFCREGRMREALRLFREI---NGATPNHVTYTTLIDGYCRVNDLEEALRL 322
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
+ +E H + Y ++ + G + + R+ + N++ +I
Sbjct: 323 REVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCK 382
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+ D+ A K K+ D +I + K +++A+E G P+ T
Sbjct: 383 IGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYST 442
Query: 372 WEIFSDYY 379
+ D Y
Sbjct: 443 YSWLVDSY 450
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 101/261 (38%), Gaps = 13/261 (4%)
Query: 232 FSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 291
S L Y + + + A + + + L A L+ + + V+++++ +
Sbjct: 130 LSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKM- 188
Query: 292 LAFPNTANISYLN-MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRL 350
+ NI N +I D+ AE+ E ES D+ N +I Y K+G
Sbjct: 189 VRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMH 248
Query: 351 ENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSS 410
A +++R R G P+ T+ + R G M+ +A+ R G P+
Sbjct: 249 YEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMR-------EALRLFREINGA-TPNH 300
Query: 411 ETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPV--MLRR 468
T T + + + D++ A E+++ GV + ++R G+ +L
Sbjct: 301 VTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNE 360
Query: 469 LKMEKVEVSEAS-KKLLEAIC 488
+ KVE + L+ A C
Sbjct: 361 MSERKVEPDNVTCNTLINAYC 381
>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/388 (21%), Positives = 149/388 (38%), Gaps = 55/388 (14%)
Query: 18 KKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKL 77
K HL + D LF + + ++ + F L + + LY+ L+
Sbjct: 124 KAHLPDKAVD-LFHRMVDEFRCKRSVKSF------------NSVLNVIINEGLYHRGLEF 170
Query: 78 SENMEKRGMNKTVSDQAIHLDLV----AKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
+ + MN +S + +LV K++ +D A F +PE + TY +L++
Sbjct: 171 YDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMD 230
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CKE ++A LL++M+ S + +N L+ K G ++ ++ M +P
Sbjct: 231 GLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVP 290
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ TYN + L + A ++E M + D T+ L + V+ A R
Sbjct: 291 NEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPND-VTYGTLINGLVKQRRATDAVRL 349
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
L +E R H + Y LI+ + G E +WR
Sbjct: 350 LSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWR----------------------- 386
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
K E GC +I V +V++ +EG+ A+E+ R G PNA T
Sbjct: 387 -----------KMAEKGCKP-NIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYT 434
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ + + G + AV ++ TG
Sbjct: 435 YSSLMKGFFKTGLCEEAVQVWKEMDKTG 462
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 110/257 (42%), Gaps = 4/257 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TYG+L+N K+ A LL M+E + ++ L++ K G E+ ++
Sbjct: 326 NDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLW 385
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
++M P+ Y+V + L + A+ ++ M G + +T +S+L + +
Sbjct: 386 RKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYT-YSSLMKGFFK 444
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
GL E+A + KE++ R+ Y LI G + E +W + ++
Sbjct: 445 TGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVA 504
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEW---ESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
Y ++I+ L + + A K + E E + D+ N+++ + + A +L
Sbjct: 505 YSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLN 564
Query: 359 RARRRGADPNAKTWEIF 375
RG DP+ T F
Sbjct: 565 SMLDRGCDPDVITCNTF 581
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/335 (18%), Positives = 135/335 (40%), Gaps = 18/335 (5%)
Query: 138 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 197
++EK KM LG S++ +S++ YA +G + + ++ ++ + + ++
Sbjct: 59 ISEKMFKSAPKMGSFKLGDSTL--SSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFI 116
Query: 198 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 257
V RA + A + M + R +F+++ ++ + GL+ + + N
Sbjct: 117 VVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVN 176
Query: 258 RNAHRDLS----AYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVN 311
N + ++S ++ +I + + ++R + R P+ +Y ++ L
Sbjct: 177 SNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPD--GYTYCTLMDGLCK 234
Query: 312 LKDLPGAEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
+ + A E +S GC+ + + NV+I K+G L +L + +G PN
Sbjct: 235 EERIDEAVLLLDEMQSEGCSPSPV-IYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEV 293
Query: 371 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 430
T+ G + AV LE+ + + K +P+ T T + +++ A
Sbjct: 294 TYNTLIHGLCLKGKLDKAVSLLERMVSS------KCIPNDVTYGTLINGLVKQRRATDAV 347
Query: 431 GFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVM 465
L +++ L ++ LI G+ M
Sbjct: 348 RLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAM 382
>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1280
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 119/281 (42%), Gaps = 1/281 (0%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
+ N + Y ++++ CK+ + A L +M + + + F+SL+ + G +
Sbjct: 189 VNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAF 248
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+ EM +I PD+YT+N+ + AL I A+ VI M ++G V T++ L
Sbjct: 249 RLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEG-VEPTVVTYNTLMDG 307
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
Y KA+ L + + +Y +I + + + E ++ +
Sbjct: 308 YCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPH 367
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
++Y ++I L +P A + E + C DI N +I + K ++ A L +
Sbjct: 368 KVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVK 427
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ + G PN T+ I D + G +K A D + + G
Sbjct: 428 KIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKG 468
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 90/179 (50%), Gaps = 3/179 (1%)
Query: 95 IHLDLVAKVQGIDAAENYFVDLP--ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKEL 152
I ++ K++ +D A F ++ + + +TY SL++ CK A L+++M
Sbjct: 338 IMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNN 397
Query: 153 NLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA 212
+ + +NSL+ ++ K H +K A+++++K I P+ TYN+ + L + A
Sbjct: 398 CIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNA 457
Query: 213 ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 271
+ V +++ G W T++ + + + GLF++AE L ++E+ D Y+ +I
Sbjct: 458 QDVFQDLLIKGYNVNAW-TYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETII 515
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 42/264 (15%), Positives = 109/264 (41%), Gaps = 21/264 (7%)
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKT-GHPEKIPAIIQEMKASSIMPDSYT 195
+ + A +M+++ S + FN ++T KT H + ++ +M++ + PD +T
Sbjct: 45 FVVDNAVLSFNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFT 104
Query: 196 YNVWMRALAAVNDISGAERVIEEMKR-----DGRV---------------AADWTTFSNL 235
++ + + ++ A V ++ + +G+V + T+ L
Sbjct: 105 LSILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGIL 164
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
+ + G A + L+++E + + ++ Y +I + +++ Y ++ + +
Sbjct: 165 INGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRI 224
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEE 355
+++ ++I + A + F E D N+++ A KEG+++ A+
Sbjct: 225 PPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKN 284
Query: 356 LKERARRRGADPNAKTWEIFSDYY 379
+ + G +P T+ D Y
Sbjct: 285 VIAVMMKEGVEPTVVTYNTLMDGY 308
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 62/132 (46%), Gaps = 2/132 (1%)
Query: 97 LDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNL 154
+D+ K Q +D A + E N TY L++ CK + A+ + + +
Sbjct: 410 IDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGY 469
Query: 155 GFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAER 214
++ +N ++ K G ++ ++ +M+ + I+PD+ TY ++AL ++ A++
Sbjct: 470 NVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQK 529
Query: 215 VIEEMKRDGRVA 226
++ EM G V
Sbjct: 530 LLREMVIKGVVV 541
>gi|326511196|dbj|BAJ87612.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 725
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 129/297 (43%), Gaps = 8/297 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N Y +++N YCK E+AE L +MKE L + + +N LM Y++ PE + +++
Sbjct: 377 NTSIYNTIMNVYCKCSQIEEAEGLFAEMKEKGLKPTKVTYNILMDAYSRRLQPEVVESLL 436
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDIS-GAERVIEEMKRDGRVAADWTTFSNLASIYV 240
EM P++ +YN + A +S AE MK+ G + A +++++L Y
Sbjct: 437 LEMHDLGFQPNARSYNCLISAYGRQKKMSEKAEDAFLRMKKGG-IKATSSSYTSLICAYA 495
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
+G +EKA A +++ L Y L+ ++ + GN ++ W+S+ +
Sbjct: 496 VSGQYEKAHIAYLDMKREGLKPSLETYTALLDIFRRAGNTEKLMETWKSMTDEKVGCTRV 555
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
++ ++ L A E+ N+++ AYAK G+ +L +
Sbjct: 556 TFHMVLDGLAKHGLFVQARDVICEFGKIGLPPTAMTYNILMNAYAKGGQHYKLPQLLKEM 615
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 417
P++ T+ Y R D A ++ + G+ VP +++ R +
Sbjct: 616 STLELKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQ------VPDAKSYRKLL 666
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 137/325 (42%), Gaps = 21/325 (6%)
Query: 71 YYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENY-FVDLPETSKNHLTYG-- 127
Y A K+ E+MEK + +I L LV K + A +++ F + G
Sbjct: 288 YDDAWKIFESMEKNNVQPDHVTSSIML-LVMKRRKASAKDSWKFFQRMNRKGVKWSLGVS 346
Query: 128 -SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKA 186
SL+ +C E M ++A +M + + ++ +N++M +Y K E+ + EMK
Sbjct: 347 ASLIKIFCDEGMKKEALIFQSEMGKRGIPSNTSIYNTIMNVYCKCSQIEEAEGLFAEMKE 406
Query: 187 SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV-EAGLF 245
+ P TYN+ M A + E ++ EM G + +++ L S Y + +
Sbjct: 407 KGLKPTKVTYNILMDAYSRRLQPEVVESLLLEMHDLG-FQPNARSYNCLISAYGRQKKMS 465
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
EKAE A ++ S+Y LI Y +G + + + ++ + +Y +
Sbjct: 466 EKAEDAFLRMKKGGIKATSSSYTSLICAYAVSGQYEKAHIAYLDMKREGLKPSLETYTAL 525
Query: 306 IQVLVNLKDLPGAEKCFKEWES------GCATYDIRVT-NVMIGAYAKEGRLENAEELKE 358
+ + + EK + W+S GC RVT ++++ AK G A ++
Sbjct: 526 LDIFRRAGN---TEKLMETWKSMTDEKVGCT----RVTFHMVLDGLAKHGLFVQARDVIC 578
Query: 359 RARRRGADPNAKTWEIFSDYYLRNG 383
+ G P A T+ I + Y + G
Sbjct: 579 EFGKIGLPPTAMTYNILMNAYAKGG 603
>gi|242053311|ref|XP_002455801.1| hypothetical protein SORBIDRAFT_03g025430 [Sorghum bicolor]
gi|241927776|gb|EES00921.1| hypothetical protein SORBIDRAFT_03g025430 [Sorghum bicolor]
Length = 642
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 113/245 (46%), Gaps = 3/245 (1%)
Query: 71 YYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK--NHLTYGS 128
Y A++L +M+ RG+ + L + A + AE YF + + N Y S
Sbjct: 201 YTKAMELINDMKSRGLQMDIVIYGTLLAICASHNYCEEAEVYFQKMKDEGHCPNLFHYSS 260
Query: 129 LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS 188
LLN Y + EKAE L++ ++ L + + +L+ +Y+K G EK ++ E++AS
Sbjct: 261 LLNAYSENSDYEKAELLMKDLRSSGLTPNKVILTTLLKVYSKGGLFEKAKELLTELEASG 320
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
D Y + + L I A+ + EMK G V +D FS + S G E++
Sbjct: 321 FAQDEMPYCILIDGLVKGGKIQEAKILFNEMKEKG-VKSDGYAFSIMISALHRGGHHEES 379
Query: 249 ERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQV 308
++ KE E+ NA DL + Y T ++ V R+ + + + NI++ +I+
Sbjct: 380 KQLAKEFESENASYDLVMLNTSLRTYCSTNDMESVMRMLKKMDELNISPDNITFNTLIRY 439
Query: 309 LVNLK 313
N K
Sbjct: 440 FCNSK 444
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 121/275 (44%), Gaps = 2/275 (0%)
Query: 120 SKNHLTYGSLLN-CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
S + TY +LL+ C + KA L+ MK L + + +L+ + A + E+
Sbjct: 181 SPDPFTYSTLLSGCMKLKQGYTKAMELINDMKSRGLQMDIVIYGTLLAICASHNYCEEAE 240
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
Q+MK P+ + Y+ + A + +D AE ++++++ G + + + L +
Sbjct: 241 VYFQKMKDEGHCPNLFHYSSLLNAYSENSDYEKAELLMKDLRSSG-LTPNKVILTTLLKV 299
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
Y + GLFEKA+ L ELE +D Y LI + G + E ++ ++ +
Sbjct: 300 YSKGGLFEKAKELLTELEASGFAQDEMPYCILIDGLVKGGKIQEAKILFNEMKEKGVKSD 359
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
++ MI L +++ KE+ES A+YD+ + N + Y +E+ + +
Sbjct: 360 GYAFSIMISALHRGGHHEESKQLAKEFESENASYDLVMLNTSLRTYCSTNDMESVMRMLK 419
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
+ P+ T+ Y+ + LA +E
Sbjct: 420 KMDELNISPDNITFNTLIRYFCNSKVYHLAYKTVE 454
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 126/310 (40%), Gaps = 11/310 (3%)
Query: 118 ETSKNHLTY-GSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMT--LYAKTGHP 174
+T K H++ S+L C K + + L ++M L +++L++ + K G+
Sbjct: 143 QTMKVHVSVCNSVLGCLVKNGRLDSSFKLYDEMIREGLSPDPFTYSTLLSGCMKLKQGYT 202
Query: 175 EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSN 234
+ + +I +MK+ + D Y + A+ N AE ++MK +G + +S+
Sbjct: 203 KAM-ELINDMKSRGLQMDIVIYGTLLAICASHNYCEEAEVYFQKMKDEGH-CPNLFHYSS 260
Query: 235 LASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF 294
L + Y E +EKAE +K+L + + L+ +Y + G + + L +
Sbjct: 261 LLNAYSENSDYEKAELLMKDLRSSGLTPNKVILTTLLKVYSKGGLFEKAKELLTELEASG 320
Query: 295 PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAE 354
+ Y +I LV + A+ F E + D ++MI A + G E ++
Sbjct: 321 FAQDEMPYCILIDGLVKGGKIQEAKILFNEMKEKGVKSDGYAFSIMISALHRGGHHEESK 380
Query: 355 ELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIR 414
+L + A + Y DM+ + L+K D P + T
Sbjct: 381 QLAKEFESENASYDLVMLNTSLRTYCSTNDMESVMRMLKKM------DELNISPDNITFN 434
Query: 415 TFMRHFEQEK 424
T +R+F K
Sbjct: 435 TLIRYFCNSK 444
>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
Length = 590
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 151/348 (43%), Gaps = 30/348 (8%)
Query: 115 DLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP 174
D P+++ L++ L+ Y MT+ A + E M+ L+ AK
Sbjct: 121 DDPDSNSQILSW--LVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLT 178
Query: 175 EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSN 234
+ + ++M ++P+ + +NV + A D+ AE+++ EM+ + D T++
Sbjct: 179 NMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEME-SRFIFPDLFTYNT 237
Query: 235 LASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF 294
L S+Y + G+ +A +E D+ Y LI + + G + E R++R + A
Sbjct: 238 LISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREINGAT 297
Query: 295 PNTANISYLNMIQVLVNLKDLPGAEKCFKEWE-----SGCATYDIRVTNVMIGAYAKEGR 349
PN +++Y +I + DL A + + E G TY N ++ +EG+
Sbjct: 298 PN--HVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTY-----NSILRKLCEEGK 350
Query: 350 LENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPS 409
+++A L R +P+ T + Y + GDM A+ +K ++ G P
Sbjct: 351 IKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLK------PD 404
Query: 410 SETIRTFMRHFEQEKDVDGAEGFL-EILKKAVDDLGVEVFEPLIRTYA 456
T + + F + +VD A+ FL E+L D G F P TY+
Sbjct: 405 QFTFKALIHGFCKLHEVDSAKEFLFEML-----DAG---FSPSYSTYS 444
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 156/381 (40%), Gaps = 10/381 (2%)
Query: 6 RFGRTKNIAKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKL 65
R G NI H+ L K G DV +QL ++S+ +TL L
Sbjct: 190 RVGVVPNI------HIFNVLIHACCKSG--DVEKAEQLLNEMESRFIFPDLFTYNTLISL 241
Query: 66 RDRK-LYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHL 124
+K ++Y AL + + ME+ G++ + + + + A F ++ + NH+
Sbjct: 242 YCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREINGATPNHV 301
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY +L++ YC+ E+A L E M+ L + +NS++ + G + ++ EM
Sbjct: 302 TYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEM 361
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ PD+ T N + A + D+ A +V ++M G + D TF L + +
Sbjct: 362 SERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAG-LKPDQFTFKALIHGFCKLHE 420
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+ A+ L E+ + S Y +L+ Y N V R+ L Y
Sbjct: 421 VDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRA 480
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+I+ L + + AE+ F + D V + AY K G+ A ++ + +R
Sbjct: 481 LIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRR 540
Query: 365 ADPNAKTWEIFSDYYLRNGDM 385
K + FS Y +G +
Sbjct: 541 LMITLKIYRCFSASYAGDGSI 561
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/308 (19%), Positives = 118/308 (38%), Gaps = 5/308 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
A+++ E+M G + + L+ +AK + + + + N + L++
Sbjct: 146 AIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIH 205
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK EKAE LL +M+ + +N+L++LY K G + I M+ + P
Sbjct: 206 ACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSP 265
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D TYN + + A R+ E+ + T++ L Y E+A R
Sbjct: 266 DIVTYNSLIYGFCREGRMREALRLFREI---NGATPNHVTYTTLIDGYCRVNDLEEALRL 322
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
+ +E H + Y ++ + G + + R+ + N++ +I
Sbjct: 323 REVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCK 382
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+ D+ A K K+ D +I + K +++A+E G P+ T
Sbjct: 383 IGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYST 442
Query: 372 WEIFSDYY 379
+ D Y
Sbjct: 443 YSWLVDSY 450
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 101/261 (38%), Gaps = 13/261 (4%)
Query: 232 FSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 291
S L Y + + + A + + + L A L+ + + V+++++ +
Sbjct: 130 LSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKM- 188
Query: 292 LAFPNTANISYLN-MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRL 350
+ NI N +I D+ AE+ E ES D+ N +I Y K+G
Sbjct: 189 VRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMH 248
Query: 351 ENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSS 410
A +++R R G P+ T+ + R G M+ +A+ R G P+
Sbjct: 249 YEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMR-------EALRLFREINGA-TPNH 300
Query: 411 ETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPV--MLRR 468
T T + + + D++ A E+++ GV + ++R G+ +L
Sbjct: 301 VTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNE 360
Query: 469 LKMEKVEVSEAS-KKLLEAIC 488
+ KVE + L+ A C
Sbjct: 361 MSERKVEPDNVTCNTLINAYC 381
>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
Length = 796
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 142/326 (43%), Gaps = 20/326 (6%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + +TY +LLN +C++ M +A ALL +MK + + +N+L++ +A+ G ++
Sbjct: 240 SPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATK 299
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+++ M A PD TYNV L + A R+ +EM+R G D T++ L
Sbjct: 300 VVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDAC 359
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
+ A R L+E+ ++ L + ++ + G L E + + ++A A
Sbjct: 360 FKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEA--LGKLEKIAEEGLAP 417
Query: 300 --ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
I+Y +I ++ A E D N ++ K R E+AEEL
Sbjct: 418 DVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELL 477
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 417
+RG P+ ++ Y + + + A+ ++ I+ K +PS T T +
Sbjct: 478 HSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIER------KLIPSISTYNTLI 531
Query: 418 RHFEQEKDVDGAEGFLEILKKAVDDL 443
+ + +E LK+A+D L
Sbjct: 532 KGLCR----------MERLKEAIDKL 547
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 105/252 (41%), Gaps = 6/252 (2%)
Query: 151 ELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDIS 210
EL L + FN L+ + G A + M+ + PD+ TYN + A +
Sbjct: 201 ELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLG 260
Query: 211 GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 270
A ++ MKRDG +A T++ L S + G ++A + ++ + DL Y L
Sbjct: 261 EARALLARMKRDG-IAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVL 319
Query: 271 ITLYGQTGNLSEVYRI---WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES 327
Q G + E +R+ L A P+ ++Y ++ + A + +E
Sbjct: 320 AMGLCQAGKVDEAFRLKDEMERLGTALPDV--VTYNTLVDACFKWRCSSDALRLLEEMRD 377
Query: 328 GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKL 387
+ N+++ + KEG+LE A E+ G P+ T+ D Y + G++
Sbjct: 378 KGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAK 437
Query: 388 AVDCLEKAIDTG 399
A +++ + G
Sbjct: 438 AFTLMDEMVGKG 449
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 137/334 (41%), Gaps = 18/334 (5%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +L++ K + A LLE+M++ + + + N ++ K G E+ +++
Sbjct: 350 VTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEK 409
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
+ + PD TYN + A +++ A +++EM G + D T + + +
Sbjct: 410 IAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKG-LKMDTFTLNTVLYNLCKMK 468
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANIS 301
+E AE L R D +Y ++ Y + N R+W + R P+ + +
Sbjct: 469 RYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSIS--T 526
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I+ L ++ L A E+ D N++I AY KEG LENA +
Sbjct: 527 YNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMV 586
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
P+ T + +G + A+ E ++ G+ T T ++
Sbjct: 587 ENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKV------DVITYNTLIQSMC 640
Query: 422 QEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 455
+ DVD A F DD+ V+ +P TY
Sbjct: 641 KVGDVDTALHFF-------DDMEVKGLQPDAFTY 667
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 131/329 (39%), Gaps = 3/329 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL+L E M +G+ T+ I + + K ++ A + E + + +TY +L++
Sbjct: 368 ALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLID 427
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
YCK KA L+++M L + N+++ K E ++ +P
Sbjct: 428 AYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVP 487
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D +Y M A + A R+ ++M + ++ +T++ L ++A
Sbjct: 488 DEVSYGTVMAAYFKEYNPEPALRLWDQMI-ERKLIPSISTYNTLIKGLCRMERLKEAIDK 546
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
L E + D + Y +I Y + G+L +R + ++ ++ L
Sbjct: 547 LNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCL 606
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
L A K F+ W D+ N +I + K G ++ A + +G P+A T
Sbjct: 607 HGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFT 666
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAIDTGR 400
+ + G + A + L K D+G+
Sbjct: 667 YNVVLSALSEAGRSEEAHNMLHKLADSGK 695
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 48/106 (45%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+T +L+N C +KA L E E + +N+L+ K G + +
Sbjct: 595 VTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDD 654
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADW 229
M+ + PD++TYNV + AL+ A ++ ++ G+++ +
Sbjct: 655 MEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSF 700
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 127/287 (44%), Gaps = 8/287 (2%)
Query: 108 AAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLM 165
+A+ Y ++ E N + L+N YCK+ +A + M + + + + LM
Sbjct: 540 SADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLM 599
Query: 166 TLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRV 225
K + I +EM+ I PD ++Y V + + + ++ A + +EM +G +
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG-L 658
Query: 226 AADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 285
+ ++ L + +G EKA+ L E+ + H + Y +I Y ++G+L+E +R
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFR 718
Query: 286 IWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 345
++ ++L + Y ++ L D+ A F + GCA+ N +I
Sbjct: 719 LFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCAS-STAPFNALINWVF 777
Query: 346 KEGRLENAEELKER----ARRRGADPNAKTWEIFSDYYLRNGDMKLA 388
K G+ E E+ R + R PN T+ I DY + G+++ A
Sbjct: 778 KFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAA 824
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 127/330 (38%), Gaps = 71/330 (21%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y SL+ YC+E + LL +MK+ N+ S + +++ +G + I++EM
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI 444
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL---------- 235
AS P+ Y ++ + A RV++EMK G +A D +++L
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG-IAPDIFCYNSLIIGLSKAKRM 503
Query: 236 -------------------------ASIYVEAGLFEKAERALKEL--------------- 255
S Y+EA F A++ +KE+
Sbjct: 504 DEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGL 563
Query: 256 -----------ENRNAHR---------DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
E +A+R D Y L+ + + + I+R +R
Sbjct: 564 INEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI 623
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEE 355
SY +I L ++ A F E T ++ + N+++G + + G +E A+E
Sbjct: 624 APDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKE 683
Query: 356 LKERARRRGADPNAKTWEIFSDYYLRNGDM 385
L + +G PNA T+ D Y ++GD+
Sbjct: 684 LLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 90/460 (19%), Positives = 181/460 (39%), Gaps = 96/460 (20%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
ALKL E+M +G+ + +D + K++ ++ A++ V++ S ++ TY L++
Sbjct: 261 ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLID 320
Query: 132 --------------------------------CYC---KELMTEKAEALLEKMKELNLGF 156
C C KE + EKA+AL + M L
Sbjct: 321 GLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIP 380
Query: 157 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
+ + SL+ Y + + + ++ EMK +I+ YTY ++ + + D+ GA ++
Sbjct: 381 QAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIV 440
Query: 217 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 276
+EM G + ++ L +++ F A R LKE++ + D+ Y LI +
Sbjct: 441 KEMIASG-CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499
Query: 277 TGNLSE-----VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESG-- 328
+ E V + L+ PN +Y I + + A+K KE E G
Sbjct: 500 AKRMDEARSFLVEMVENGLK---PNA--FTYGAFISGYIEASEFASADKYVKEMRECGVL 554
Query: 329 ----------------------CATY----------DIRVTNVMIGAYAKEGRLENAEEL 356
C+ Y D + V++ K ++++AEE+
Sbjct: 555 PNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEI 614
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTF 416
R +G P+ ++ + + + + G+M+ A ++ ++ G P+
Sbjct: 615 FREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG------LTPNVIIYNML 668
Query: 417 MRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYA 456
+ F + +++ A K+ +D++ V+ P TY
Sbjct: 669 LGGFCRSGEIEKA-------KELLDEMSVKGLHPNAVTYC 701
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 143/337 (42%), Gaps = 13/337 (3%)
Query: 106 IDAAENYFVDL--PETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNS 163
+D AE F ++ + + +YG L+N + K +KA ++ ++M E L + + +N
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 164 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
L+ + ++G EK ++ EM + P++ TY + D++ A R+ +EMK G
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727
Query: 224 RVAADWTTFSNLASIYVEAGLFEKAERALKEL--ENRNAHRDLSAYQFLITL---YGQTG 278
V D ++ L ERA+ + + + LI +G+T
Sbjct: 728 LV-PDSFVYTTLVD---GCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTE 783
Query: 279 NLSEVY-RIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVT 337
+EV R+ F +++Y MI L +L A++ F + ++ +
Sbjct: 784 LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 843
Query: 338 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
++ Y K GR + + A G +P+ + + + +L+ G A+ +++
Sbjct: 844 TSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFA 903
Query: 398 TGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 434
D G + S T R + F + +++ AE +E
Sbjct: 904 KNAVDDGCKL-SISTCRALLSGFAKVGEMEVAEKVME 939
>gi|357445509|ref|XP_003593032.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482080|gb|AES63283.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 627
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 135/318 (42%), Gaps = 7/318 (2%)
Query: 141 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 200
KA L++++++ L + + +++ + A G E+ +MK+ P+ Y Y+ +
Sbjct: 192 KALELIQELQDNKLRMDDVIYGAILAVCASNGKWEEAEYYFNQMKSEGRSPNVYHYSSLL 251
Query: 201 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 260
A +A D + A+ +I++M+ +G +A + + L +YV GLFEK+ L +LE+
Sbjct: 252 NAYSACGDFTKADALIQDMESEG-LAPNKVILTTLLKVYVRGGLFEKSRELLAKLESLGY 310
Query: 261 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 320
D Y L+ + E I+ + + ++ +I K A++
Sbjct: 311 AEDEMPYCVLMDGLAKARQTHEAKIIFDEMMKKHVMSDGYAHSIIISAFCRAKLFQEAKQ 370
Query: 321 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 380
K++++ YD+ + N M+ A+ + G +E+ E + P+ T+ I Y+
Sbjct: 371 LAKDFQTTFDKYDVVIMNSMLCAFCRAGEMESVMETLRKMDELAISPDYNTFNILIKYFC 430
Query: 381 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 440
R LA G + P+ E + + H QE A +L+ +
Sbjct: 431 RKNMYLLAYRTTMDMHSKG------YQPAEELCSSLIYHLGQENASSEAFSLYNMLRYSK 484
Query: 441 DDLGVEVFEPLIRTYAAA 458
+G + E ++ A
Sbjct: 485 RTIGKALHEKILHILLAG 502
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 63/326 (19%), Positives = 117/326 (35%), Gaps = 40/326 (12%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N + +LL Y + + EK+ LL K++ L MP+ LM AK + I
Sbjct: 278 NKVILTTLLKVYVRGGLFEKSRELLAKLESLGYAEDEMPYCVLMDGLAKARQTHEAKIIF 337
Query: 182 QEMKASSIMPDSYTYNVWMRA--------------------------------LAAVNDI 209
EM +M D Y +++ + A L A
Sbjct: 338 DEMMKKHVMSDGYAHSIIISAFCRAKLFQEAKQLAKDFQTTFDKYDVVIMNSMLCAFCRA 397
Query: 210 SGAERVIEEMKR--DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAY 267
E V+E +++ + ++ D+ TF+ L + ++ A R ++ ++
Sbjct: 398 GEMESVMETLRKMDELAISPDYNTFNILIKYFCRKNMYLLAYRTTMDMHSKGYQPAEELC 457
Query: 268 QFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES 327
LI GQ SE + ++ LR + + ++ +L+ K L A FK+ +
Sbjct: 458 SSLIYHLGQENASSEAFSLYNMLRYSKRTIGKALHEKILHILLAGKLLKDAYVVFKDNAT 517
Query: 328 GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKL 387
+ T A+ K G + ++ + G + +E+ YL + K
Sbjct: 518 SISG---PTTKKFASAFMKSGNINLINDVMKTLHNCGYKIDQGLFEMAVSRYLGQPEKK- 573
Query: 388 AVDCLEKAIDTGRGDGGKWVPSSETI 413
D L + G G PS+ +
Sbjct: 574 --DLLLHLLQWMPGQGYVINPSTRNL 597
>gi|302782654|ref|XP_002973100.1| hypothetical protein SELMODRAFT_442013 [Selaginella moellendorffii]
gi|300158853|gb|EFJ25474.1| hypothetical protein SELMODRAFT_442013 [Selaginella moellendorffii]
Length = 674
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 161/359 (44%), Gaps = 10/359 (2%)
Query: 45 QFLKSKKRVF---KWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVA 101
++LK++ ++ ++ LK LR+ + + KL E M RG+ + ++
Sbjct: 130 EWLKARPELYEINRYTYNVMLKILRNGRQLELSEKLVEEMTGRGIQPDNYTFSTLINCAK 189
Query: 102 KVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSM 159
+ + + A +F + + +TY S+++ Y + +A L EK+K +N ++
Sbjct: 190 RCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLKSVNWKLDTV 249
Query: 160 PFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM 219
+ ++ +YA+ G + I ++QEM+ S P++ N M L+ ++ A++V EM
Sbjct: 250 TYGAIANVYARAGDYQSIIQLVQEMRDSGSSPNAVIMNTLMGTLSKAGKVNQAKKVFNEM 309
Query: 220 KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGN 279
+ G V+ T S L +Y G +++A + L+ D++ Y L+ + G
Sbjct: 310 RTSG-VSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKCDVAVYNSLMKACVEGGR 368
Query: 280 LSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
+ + I + ++ A N +++Y + + A + F + + D + V
Sbjct: 369 VEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPARRMFDKVVALNGKPDTPLFTV 428
Query: 340 MIGAYAKEGRLENAEELKERARRRG-ADPNAKTWEIFSDY--YLRNGDMKLAV-DCLEK 394
MI A G +E A ++ + G P+ + + +N D +LA+ DCL+K
Sbjct: 429 MIRACKLAGEIEQASKIFDEMMESGCCSPDERVSGMLLSCMAMAKNDDERLAILDCLDK 487
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/279 (18%), Positives = 127/279 (45%), Gaps = 9/279 (3%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N TY +L E +E L+E+M + + F++L+ + PE+
Sbjct: 142 NRYTYNVMLKILRNGRQLELSEKLVEEMTGRGIQPDNYTFSTLINCAKRCRQPEEALKWF 201
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADW----TTFSNLAS 237
+ MK+ I+PD TYN + V ++ A + E++K + +W T+ +A+
Sbjct: 202 ERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLK-----SVNWKLDTVTYGAIAN 256
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
+Y AG ++ + ++E+ + + + L+ + G +++ +++ +R + +
Sbjct: 257 VYARAGDYQSIIQLVQEMRDSGSSPNAVIMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSP 316
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
++ ++++ + A + ++ ++ D+ V N ++ A + GR+E AE++
Sbjct: 317 TPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKCDVAVYNSLMKACVEGGRVEQAEDIL 376
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 396
+ +R G +P+ T+ + Y G + A +K +
Sbjct: 377 KEMKRAGCNPDHLTYRTAMNTYATKGMVDPARRMFDKVV 415
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 127/308 (41%), Gaps = 9/308 (2%)
Query: 158 SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM--PDSYTYNVWMRALAAVNDISGAERV 215
S+ +++T+ EK A + +KA + + YTYNV ++ L + +E++
Sbjct: 106 SLSAKNIVTVLNNINRWEKALAFFEWLKARPELYEINRYTYNVMLKILRNGRQLELSEKL 165
Query: 216 IEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYG 275
+EEM G + D TFS L + E+A + + +++ D Y +I +YG
Sbjct: 166 VEEMTGRG-IQPDNYTFSTLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYG 224
Query: 276 QTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 335
+ G ++E ++ L+ ++Y + V D + +E ++ +
Sbjct: 225 RVGRVNEAVELYEKLKSVNWKLDTVTYGAIANVYARAGDYQSIIQLVQEMRDSGSSPNAV 284
Query: 336 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 395
+ N ++G +K G++ A+++ R G P T I + Y R G A + E
Sbjct: 285 IMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETL 344
Query: 396 IDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 455
G W + M+ + V+ AE L+ +K+A + + + TY
Sbjct: 345 KTEG------WKCDVAVYNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTY 398
Query: 456 AAAGRTSP 463
A G P
Sbjct: 399 ATKGMVDP 406
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 127/287 (44%), Gaps = 8/287 (2%)
Query: 108 AAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLM 165
+A+ Y ++ E N + L+N YCK+ +A + M + + + + LM
Sbjct: 540 SADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLM 599
Query: 166 TLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRV 225
K + I +EM+ I PD ++Y V + + + ++ A + +EM +G +
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG-L 658
Query: 226 AADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 285
+ ++ L + +G EKA+ L E+ + H + Y +I Y ++G+L+E +R
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFR 718
Query: 286 IWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 345
++ ++L + Y ++ L D+ A F + GCA+ N +I
Sbjct: 719 LFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCAS-STAPFNALINWVF 777
Query: 346 KEGRLENAEELKER----ARRRGADPNAKTWEIFSDYYLRNGDMKLA 388
K G+ E E+ R + R PN T+ I DY + G+++ A
Sbjct: 778 KFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAA 824
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 127/330 (38%), Gaps = 71/330 (21%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y SL+ YC+E + LL +MK+ N+ S + +++ +G + I++EM
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI 444
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL---------- 235
AS P+ Y ++ + A RV++EMK G +A D +++L
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG-IAPDIFCYNSLIIGLSKAKRM 503
Query: 236 -------------------------ASIYVEAGLFEKAERALKEL--------------- 255
S Y+EA F A++ +KE+
Sbjct: 504 DEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGL 563
Query: 256 -----------ENRNAHR---------DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
E +A+R D Y L+ + + + I+R +R
Sbjct: 564 INEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI 623
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEE 355
SY +I L ++ A F E T ++ + N+++G + + G +E A+E
Sbjct: 624 APDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKE 683
Query: 356 LKERARRRGADPNAKTWEIFSDYYLRNGDM 385
L + +G PNA T+ D Y ++GD+
Sbjct: 684 LLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 90/460 (19%), Positives = 181/460 (39%), Gaps = 96/460 (20%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
ALKL E+M +G+ + +D + K++ ++ A++ V++ S ++ TY L++
Sbjct: 261 ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLID 320
Query: 132 --------------------------------CYC---KELMTEKAEALLEKMKELNLGF 156
C C KE + EKA+AL + M L
Sbjct: 321 GLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIP 380
Query: 157 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
+ + SL+ Y + + + ++ EMK +I+ YTY ++ + + D+ GA ++
Sbjct: 381 QAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIV 440
Query: 217 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 276
+EM G + ++ L +++ F A R LKE++ + D+ Y LI +
Sbjct: 441 KEMIASG-CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499
Query: 277 TGNLSE-----VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESG-- 328
+ E V + L+ PN +Y I + + A+K KE E G
Sbjct: 500 AKRMDEARSFLVEMVENGLK---PNA--FTYGAFISGYIEASEFASADKYVKEMRECGVL 554
Query: 329 ----------------------CATY----------DIRVTNVMIGAYAKEGRLENAEEL 356
C+ Y D + V++ K ++++AEE+
Sbjct: 555 PNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEI 614
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTF 416
R +G P+ ++ + + + + G+M+ A ++ ++ G P+
Sbjct: 615 FREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG------LTPNVIIYNML 668
Query: 417 MRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYA 456
+ F + +++ A K+ +D++ V+ P TY
Sbjct: 669 LGGFCRSGEIEKA-------KELLDEMSVKGLHPNAVTYC 701
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 143/337 (42%), Gaps = 13/337 (3%)
Query: 106 IDAAENYFVDL--PETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNS 163
+D AE F ++ + + +YG L+N + K +KA ++ ++M E L + + +N
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 164 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
L+ + ++G EK ++ EM + P++ TY + D++ A R+ +EMK G
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727
Query: 224 RVAADWTTFSNLASIYVEAGLFEKAERALKEL--ENRNAHRDLSAYQFLITL---YGQTG 278
V D ++ L ERA+ + + + LI +G+T
Sbjct: 728 LV-PDSFVYTTLVD---GCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTE 783
Query: 279 NLSEVY-RIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVT 337
+EV R+ F +++Y MI L +L A++ F + ++ +
Sbjct: 784 LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 843
Query: 338 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
++ Y K GR + + A G +P+ + + + +L+ G A+ +++
Sbjct: 844 TSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFA 903
Query: 398 TGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 434
D G + S T R + F + +++ AE +E
Sbjct: 904 KNAVDDGCKL-SISTCRALLSGFAKVGEMEVAEKVME 939
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 140/321 (43%), Gaps = 20/321 (6%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+T+G+L++ CK E A +L+ M L + + + +N+L+ K+G E+ ++E
Sbjct: 603 MTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEE 662
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M +S +PDS TY + AL + A +++ E+K G D T++ L ++G
Sbjct: 663 MVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGW-DPDTVTYNILVDGLWKSG 721
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW-----RSLRLAFPNTA 298
E+A L+E+ + H D+ Y LI + G+L E R+ R R PN
Sbjct: 722 QTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNV- 780
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEW--ESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
++Y +I L + + A + +E +S +I N + K+ + A EL
Sbjct: 781 -VTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACEL 839
Query: 357 KERARRRGA---DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETI 413
R+ R G+ P+ T+ D + G A + + I G +VP+ T
Sbjct: 840 M-RSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMI------AGGYVPNVVTY 892
Query: 414 RTFMRHFEQEKDVDGAEGFLE 434
M + ++ A +E
Sbjct: 893 NVLMNGLCKTDKMERAHAMIE 913
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 113/278 (40%), Gaps = 6/278 (2%)
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
E + +T+ L+ CK E+A AL E+M NL M F +L+ K G E
Sbjct: 562 ELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAA 621
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
I+ M + P+ TYN + L I A + +EEM G V D T+ +L
Sbjct: 622 RDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCV-PDSITYGSLVY 680
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
A + A + + EL++ D Y L+ ++G + + + +
Sbjct: 681 ALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHP 740
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWE---SGCATYDIRVTNVMIGAYAKEGRLENAE 354
++Y +I L DL A + + S C ++ +V+I K GR++ A
Sbjct: 741 DVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEAR 800
Query: 355 ELKERARRRGAD--PNAKTWEIFSDYYLRNGDMKLAVD 390
EL + R+ D PN T+ F D + M A +
Sbjct: 801 ELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACE 838
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 158/405 (39%), Gaps = 50/405 (12%)
Query: 25 LYDRLFKKGSSD--VSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENME 82
L D L+K G ++ ++V +++ V + D+L K D + A +L +M
Sbjct: 713 LVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLE---EARRLHGDMS 769
Query: 83 KRGMNKTVSDQAIHLDLV---AKVQGIDAAENYFVDLPETS----KNHLTYGSLLNCYCK 135
R V + + L+ KV ID A ++ S N +TY S L+ CK
Sbjct: 770 SRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCK 829
Query: 136 ELMTEKAEALLEKMKELNLGFS--SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDS 193
+ M +A L+ +++ +L S ++ F++L+ K G ++ + +M A +P+
Sbjct: 830 QSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNV 889
Query: 194 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 253
TYNV M L + + A +IE M G V D T+S L + +A ++A L
Sbjct: 890 VTYNVLMNGLCKTDKMERAHAMIESMVDKG-VTPDVITYSVLVDAFCKASHVDEALELLH 948
Query: 254 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--------------------- 292
+ +R ++ + +I ++ E ++++ + L
Sbjct: 949 GMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRT 1008
Query: 293 -----------AFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 341
A P+ ++ I L L D+ A E E D N++I
Sbjct: 1009 GWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLELE---LVPDKVTFNILI 1065
Query: 342 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 386
K G E A L E + P+ T+ D + G ++
Sbjct: 1066 AGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVE 1110
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/400 (20%), Positives = 159/400 (39%), Gaps = 31/400 (7%)
Query: 44 NQFLKS-KKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAK 102
N FL K+ E + ++ LRD L R TV+ + +D + K
Sbjct: 327 NSFLDGLCKQSMTAEACELMRSLRDGSL-------------RVSPDTVTFSTL-IDGLCK 372
Query: 103 VQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMP 160
ID A + F D+ N +TY +L+N CK E+A A++E M + + +
Sbjct: 373 CGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVIT 432
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
++ L+ + K ++ ++ M + P+ T+N + L + A ++ ++M
Sbjct: 433 YSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMA 492
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
+ D T+ L G +AE L + + + + A+ I + G++
Sbjct: 493 LKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTY----AFNCCINGLSKLGDV 548
Query: 281 SEVYRIW-RSLRLAF-PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 338
S +++ R L L P+ +++ +I + A F+E + D+
Sbjct: 549 SRALQVYNRMLELELVPD--KVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFG 606
Query: 339 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 398
+I K G++E A ++ + G PN T+ ++G ++ A LE+ + +
Sbjct: 607 ALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSS 666
Query: 399 GRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 438
G VP S T + + + D A + LK
Sbjct: 667 G------CVPDSITYGSLVYALCRASRTDDALQLVSELKS 700
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 107/259 (41%), Gaps = 7/259 (2%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +++N CK L E++ E + +N+L+ K G E+ + +
Sbjct: 217 VTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGD 276
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR-DGRVAADWTTFSNLASIYVEA 242
M + S +P+ TY+V + L V I A +I+EM R V + T+++ +
Sbjct: 277 MSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQ 336
Query: 243 GLFEKAERALKELENRN--AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTA 298
+ +A ++ L + + D + LI + G + E ++ + PN
Sbjct: 337 SMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNV- 395
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
I+Y ++ L + A + T D+ +V++ A+ K R++ A EL
Sbjct: 396 -ITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLH 454
Query: 359 RARRRGADPNAKTWEIFSD 377
RG PN T+ D
Sbjct: 455 GMASRGCTPNVVTFNSIID 473
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 118/299 (39%), Gaps = 45/299 (15%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ +TYGSL+ C+ T+ A L+ ++K ++ +N L+ K+G E+ ++
Sbjct: 671 DSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVL 730
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK-RDGRVAA-DWTTFSNLASIY 239
+EM PD TYN + +L D+ A R+ +M R R + T+S L +
Sbjct: 731 EEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGL 790
Query: 240 VEAGLFEKAERALKELENRNAH--RDLSAYQFLITLYGQTGNLSEVYRIWRSLR----LA 293
+ G ++A ++E+ ++ ++ Y + + ++E + RSLR
Sbjct: 791 CKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRV 850
Query: 294 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESG----------------C-------- 329
P+T +++ +I L A F + +G C
Sbjct: 851 SPDT--VTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERA 908
Query: 330 -----------ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 377
T D+ +V++ A+ K ++ A EL RG PN T+ D
Sbjct: 909 HAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIID 967
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 96/216 (44%), Gaps = 11/216 (5%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A + E+M +G+ V ++ +D K +D A + + N +T+ S+++
Sbjct: 908 AHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIID 967
Query: 132 CYCKELMTEKAEALLEKMK-ELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
CK + +A + + M + L + + +L+ +TG + ++ M
Sbjct: 968 GLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPD---- 1023
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
PD+Y +N + L+ + D+S A + E++ + D TF+ L + +AG FE+A
Sbjct: 1024 PDTYAFNCCINGLSKLGDVSRALHRMLELE----LVPDKVTFNILIAGACKAGNFEQASA 1079
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
+E+ +N D+ + LI + G + + I
Sbjct: 1080 LFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATWDI 1115
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 70/343 (20%), Positives = 121/343 (35%), Gaps = 52/343 (15%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA------------------ 202
FN + L K+G P K + + P+ +TY+ +RA
Sbjct: 114 FNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVERTLGFFRRI 173
Query: 203 -------------LAAVNDISGAERVIE----EMKRDGRVAADWTTFSNLASIYVEAGLF 245
L ++ R +E EM RDG VA T++ + + ++
Sbjct: 174 RSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDG-VAPTIVTYNTIINGLCKSNEL 232
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW--RSLRLAFPNTANISYL 303
+EL R H D+ Y LI + G+L E R+ S R PN ++Y
Sbjct: 233 GAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNV--VTYS 290
Query: 304 NMIQVLVNLKDLPGAEKCFKEW--ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
+I L + + A + +E +S +I N + K+ A EL R+
Sbjct: 291 VLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELM-RSL 349
Query: 362 RRGA---DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 418
R G+ P+ T+ D + G + A + I G +VP+ T +
Sbjct: 350 RDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMI------AGGYVPNVITYNALVN 403
Query: 419 HFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 461
+ ++ A +E + V + L+ + A R
Sbjct: 404 GLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRV 446
>gi|449530158|ref|XP_004172063.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Cucumis sativus]
Length = 608
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 132/287 (45%), Gaps = 3/287 (1%)
Query: 72 YPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSL 129
+ +L+ +M K+G+ + + + + A +Q + AE+ + + ++ + L
Sbjct: 277 FESLEFFRDMRKKGIAEDYTIYSALICTFASIQEVKLAEDLYNEAKAKKLLRDPAMFLKL 336
Query: 130 LNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
+ Y ++ EKA ++E MK+ +G S F +++ YA E + +++
Sbjct: 337 ILMYVQQGSLEKALEIVEVMKDFKIGVSDCIFCAIVNGYATRRGYEAAVKVYEKLIEDGC 396
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
P TY + A V S AE + EM+ G +S+L S+Y + G + A
Sbjct: 397 EPGQVTYASAINAYCRVGLYSKAEDIFGEMEEKG-FDKCVVAYSSLISMYGKTGRLKDAM 455
Query: 250 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 309
R L +++ + ++ Y L+ ++G+ NL +V ++W+ ++ +SY ++I
Sbjct: 456 RLLAKMKEKGCQPNVWIYNILMEMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIISAY 515
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
V + E+ ++E+ T D +M+G ++K R++ +L
Sbjct: 516 VKASEFEKCEQYYREFRMNGGTIDKAFGGIMVGVFSKTSRVDELVKL 562
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 107/266 (40%), Gaps = 11/266 (4%)
Query: 131 NCYCK----ELMTEKAEALLEKMKELNLGFS-SMPFNS-----LMTLYAKTGHPEKIPAI 180
CYC+ L +E ++E E+ S S PF++ L AK+G +
Sbjct: 223 GCYCRVMEAYLKLGDSERVMELFNEVESRISDSTPFSTKIYGILCESLAKSGRVFESLEF 282
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
++M+ I D Y+ + A++ ++ AE + E K ++ D F L +YV
Sbjct: 283 FRDMRKKGIAEDYTIYSALICTFASIQEVKLAEDLYNEAKAK-KLLRDPAMFLKLILMYV 341
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
+ G EKA ++ +++ + ++ Y +++ L +
Sbjct: 342 QQGSLEKALEIVEVMKDFKIGVSDCIFCAIVNGYATRRGYEAAVKVYEKLIEDGCEPGQV 401
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
+Y + I + AE F E E + + +I Y K GRL++A L +
Sbjct: 402 TYASAINAYCRVGLYSKAEDIFGEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKM 461
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMK 386
+ +G PN + I + + + ++K
Sbjct: 462 KEKGCQPNVWIYNILMEMHGKAKNLK 487
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 110/271 (40%), Gaps = 6/271 (2%)
Query: 133 YCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKA--SSIM 190
Y K M + + +++K + S + +M Y K G E++ + E+++ S
Sbjct: 197 YNKLHMHKSTIMVFQRLKSARIEADSGCYCRVMEAYLKLGDSERVMELFNEVESRISDST 256
Query: 191 PDSY-TYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
P S Y + +LA + + +M++ G +A D+T +S L + + AE
Sbjct: 257 PFSTKIYGILCESLAKSGRVFESLEFFRDMRKKG-IAEDYTIYSALICTFASIQEVKLAE 315
Query: 250 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 309
E + + RD + + LI +Y Q G+L + I ++ ++ + ++
Sbjct: 316 DLYNEAKAKKLLRDPAMFLKLILMYVQQGSLEKALEIVEVMKDFKIGVSDCIFCAIVNGY 375
Query: 310 VNLKDLPGAEKCF-KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 368
+ A K + K E GC + + I AY + G AE++ +G D
Sbjct: 376 ATRRGYEAAVKVYEKLIEDGCEPGQVTYASA-INAYCRVGLYSKAEDIFGEMEEKGFDKC 434
Query: 369 AKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ Y + G +K A+ L K + G
Sbjct: 435 VVAYSSLISMYGKTGRLKDAMRLLAKMKEKG 465
>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Vitis vinifera]
Length = 708
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 157/368 (42%), Gaps = 17/368 (4%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS---KNHLTYGSLL 130
A +L E M +RG V +D + K + A F+ L + N TY +++
Sbjct: 313 AFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMI 372
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
N YCKE +AE LL +M+E L ++ + +L+ + K G+ + ++ M
Sbjct: 373 NGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFS 432
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
P+ YTYN + L + A R++ ++ G + AD T++ L S++ ++
Sbjct: 433 PNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHG-LQADGVTYTILMSVHCRQADTNRSLV 491
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW-RSLRLAFPNTANISYLNMIQVL 309
++ D+ +Y LI+ + + + E R++ ++ L T +Y +MI
Sbjct: 492 FFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKK-TYTSMICGY 550
Query: 310 VNLKDLPGAEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 368
+ A K F+ + GCA D +I KE +L++A L + +G P
Sbjct: 551 CRYGNTSLAVKLFQRMSNHGCAP-DSITYGALISGLCKESKLDDARNLYDAMMDKGLSPC 609
Query: 369 AKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDG 428
T + Y + D A++ L+ R + +W+ T+ T +R E +D
Sbjct: 610 EVTRLTLAYEYCKKDDSSTAINVLD------RLEKRQWI---RTVNTLVRKLCSEGKLDM 660
Query: 429 AEGFLEIL 436
A F L
Sbjct: 661 AALFFHKL 668
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 80/406 (19%), Positives = 157/406 (38%), Gaps = 38/406 (9%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A+ + M+ +G+ + LD+ + ++ AEN FV++ + S + +++ ++
Sbjct: 173 AVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVV 232
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C +AE L M E + ++ + + G+ ++ +M + P
Sbjct: 233 ACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAP 292
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ + + L I A ++EEM R G + T + L + G EKA R
Sbjct: 293 NVINFTALINGLCKQGSIKQAFELLEEMVRRGW-KPNVYTHTTLIDGLCKKGWTEKAFRL 351
Query: 252 LKELENRNAHR-DLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYL----- 303
+L + ++ ++ Y +I Y + L+ + ++ PNT + L
Sbjct: 352 FLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHC 411
Query: 304 ---NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
N ++ L DL G E + +I N +I K+G L+ A L +
Sbjct: 412 KVGNFVRAY-ELMDLMGKEG---------FSPNIYTYNAIIDGLCKKGSLDEAYRLLNKV 461
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 420
G + T+ I + R D ++ K + G + P + T + F
Sbjct: 462 SVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVG------FTPDIHSYTTLISTF 515
Query: 421 EQEKDVDGAEGFLEILKKAVDDLGV----EVFEPLIRTYAAAGRTS 462
++K + +E E +AV LG+ + + +I Y G TS
Sbjct: 516 CRQKQMKESERLFE---EAV-SLGLIPTKKTYTSMICGYCRYGNTS 557
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 48/248 (19%), Positives = 98/248 (39%), Gaps = 6/248 (2%)
Query: 140 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 199
++A ++ +M+ L S+ N ++ + G E + EM + PD ++ +
Sbjct: 171 KEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLM 230
Query: 200 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 259
+ A + + AER + M G + D T + + + + G + ++
Sbjct: 231 VVACCNMGRVLEAERWLNAMVERGFI-VDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMG 289
Query: 260 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 317
++ + LI + G++ + + + + R PN ++ +I L
Sbjct: 290 LAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNV--YTHTTLIDGLCKKGWTEK 347
Query: 318 AEKCF-KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 376
A + F K S ++ MI Y KE +L AE L R + +G PN T+
Sbjct: 348 AFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLI 407
Query: 377 DYYLRNGD 384
D + + G+
Sbjct: 408 DGHCKVGN 415
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 123/279 (44%), Gaps = 12/279 (4%)
Query: 159 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 218
+P SL+ + + G +K +++ ++ S +PD TYNV + +I A +V++
Sbjct: 93 IPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDR 152
Query: 219 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 278
M VA D T++ + ++G ++A L + + D+ Y LI +
Sbjct: 153 MN----VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKES 208
Query: 279 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES-GCATYDIRVT 337
+ + ++ +R ++Y +I + L A K S GC ++
Sbjct: 209 GVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQP-NVITH 267
Query: 338 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
N+++ + GR +AE+L R+G P+ T+ I ++ R G + A+D LEK
Sbjct: 268 NIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPM 327
Query: 398 TGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 436
G P+S + + F +EK +D A +L+I+
Sbjct: 328 HG------CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 360
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 133/320 (41%), Gaps = 15/320 (4%)
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
E + +TY L+ CKE +A LL++M+ + +N L+ K G ++
Sbjct: 189 ECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEA 248
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
+ M + P+ T+N+ +R++ + AE+++ +M R G + TF+ L +
Sbjct: 249 IKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKG-CSPSVVTFNILIN 307
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS---EVYRIWRSLRLAF 294
GL +A L+++ + +Y L+ + + + E I S R +
Sbjct: 308 FLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVS-RGCY 366
Query: 295 PNTANISYLNMIQVLVNLKDLPGAEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENA 353
P+ ++Y ++ L + A + + S GC+ I N +I +K G+ E A
Sbjct: 367 PDI--VTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLI-TYNTVIDGLSKVGKTERA 423
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETI 413
+L + RR+G P+ T+ R G + A+ +G P++ T
Sbjct: 424 IKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDL------EGLGIRPNAITY 477
Query: 414 RTFMRHFEQEKDVDGAEGFL 433
+ M + + D A FL
Sbjct: 478 NSIMLGLCKSRQTDRAIDFL 497
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 88/185 (47%), Gaps = 3/185 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP--ETSKNHLTYGSLLN 131
A KL +M ++G + +V I ++ + + + A + +P + N L+Y LL+
Sbjct: 283 AEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLH 342
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+CKE ++A L+ M + +N+L+T K G + I+ ++ + P
Sbjct: 343 GFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSP 402
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
TYN + L+ V A ++++EM+R G + D T+S+L S G ++A +
Sbjct: 403 VLITYNTVIDGLSKVGKTERAIKLLDEMRRKG-LKPDIITYSSLVSGLSREGKVDEAIKF 461
Query: 252 LKELE 256
+LE
Sbjct: 462 FHDLE 466
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/276 (17%), Positives = 117/276 (42%), Gaps = 4/276 (1%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY L++ YCK + A +L++M N+ + +N+++ +G ++ ++
Sbjct: 128 ITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDR 184
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
PD TY + + A + + A ++++EM+ G D T++ L + + G
Sbjct: 185 QLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGS-KPDVVTYNVLINGICKEG 243
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
++A + L + + ++ + ++ TG + ++ + + + +++
Sbjct: 244 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 303
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I L L A ++ T + N ++ + KE +++ A E + R
Sbjct: 304 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 363
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
G P+ T+ ++G + +AV+ L + G
Sbjct: 364 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKG 399
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/359 (19%), Positives = 135/359 (37%), Gaps = 8/359 (2%)
Query: 79 ENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELM 138
E +E+ G V + + K ID A +D + + +TY ++L C
Sbjct: 116 EILEQSGAVPDVITYNVLISGYCKSGEIDNALQ-VLDRMNVAPDVVTYNTILRTLCDSGK 174
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
++A +L++ + + + L+ K + ++ EM+ PD TYNV
Sbjct: 175 LKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNV 234
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
+ + + A + + M G + T + + G + AE+ L ++ +
Sbjct: 235 LINGICKEGRLDEAIKFLNNMPSYG-CQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRK 293
Query: 259 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 318
+ + LI + G L I + + ++SY ++ K + A
Sbjct: 294 GCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRA 353
Query: 319 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 378
+ S DI N ++ A K+G+++ A E+ + +G P T+ D
Sbjct: 354 IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDG 413
Query: 379 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 437
+ G + A+ K +D R G K P T + + +E VD A F L+
Sbjct: 414 LSKVGKTERAI----KLLDEMRRKGLK--PDIITYSSLVSGLSREGKVDEAIKFFHDLE 466
>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g31400, chloroplastic; Flags: Precursor
gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
Length = 918
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 122/271 (45%), Gaps = 5/271 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ +T+ SLL + + E A L ++M + +N+L+ K G + I+
Sbjct: 338 DRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEIL 397
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+M IMP+ +Y+ + A A + EM+ G +A D +++ L SIY +
Sbjct: 398 AQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLG-IALDRVSYNTLLSIYTK 456
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR--LAFPNTAN 299
G E+A L+E+ + +D+ Y L+ YG+ G EV +++ ++ PN
Sbjct: 457 VGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNL-- 514
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
++Y +I A + F+E++S D+ + + +I A K G + +A L +
Sbjct: 515 LTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDE 574
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
+ G PN T+ D + R+ M + D
Sbjct: 575 MTKEGISPNVVTYNSIIDAFGRSATMDRSAD 605
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 96/211 (45%), Gaps = 3/211 (1%)
Query: 70 LYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP--ETSKNHLTYG 127
L+ A L + M R + + V LD + K +D A +P N ++Y
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYS 413
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 187
++++ + K ++A L +M+ L + + +N+L+++Y K G E+ I++EM +
Sbjct: 414 TVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV 473
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
I D TYN + ++V EMKR+ V + T+S L Y + GL+++
Sbjct: 474 GIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKRE-HVLPNLLTYSTLIDGYSKGGLYKE 532
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTG 278
A +E ++ D+ Y LI + G
Sbjct: 533 AMEIFREFKSAGLRADVVLYSALIDALCKNG 563
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 110/275 (40%), Gaps = 37/275 (13%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVN-DISGAERVIEEM 219
F++L++ Y ++G E+ ++ MK + P+ TYN + A + + +EM
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 220 KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGN 279
+R+G V D TF++L ++ GL+E A E+ NR +D+ +Y L+ + G
Sbjct: 331 QRNG-VQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 280 LSEVYRIWRSLRL--AFPNTAN---------------------------------ISYLN 304
+ + I + + PN + +SY
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNT 449
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
++ + + A +E S D+ N ++G Y K+G+ + +++ +R
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH 509
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
PN T+ D Y + G K A++ + G
Sbjct: 510 VLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAG 544
Score = 42.0 bits (97), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
K+ +TY +LL Y K+ ++ + + +MK ++ + + +++L+ Y+K G ++ I
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEI 536
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL----- 235
+E K++ + D Y+ + AL + A +I+EM ++G ++ + T++++
Sbjct: 537 FREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG-ISPNVVTYNSIIDAFG 595
Query: 236 -------ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 276
++ Y G + AL L +R +I L+GQ
Sbjct: 596 RSATMDRSADYSNGGSLPFSSSALSALTETEGNR-------VIQLFGQ 636
>gi|449466949|ref|XP_004151188.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Cucumis sativus]
Length = 608
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 132/287 (45%), Gaps = 3/287 (1%)
Query: 72 YPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSL 129
+ +L+ +M K+G+ + + + + A +Q + AE+ + + ++ + L
Sbjct: 277 FESLEFFRDMRKKGIAEDYTIYSALICTFASIQEVKLAEDLYNEAKAKKLLRDPAMFLKL 336
Query: 130 LNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
+ Y ++ EKA ++E MK+ +G S F +++ YA E + +++
Sbjct: 337 ILMYVQQGSLEKALEIVEVMKDFKIGVSDCIFCAIVNGYATRRGYEAAVKVYEKLIEDGC 396
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
P TY + A V S AE + EM+ G +S+L S+Y + G + A
Sbjct: 397 EPGQVTYASAINAYCRVGLYSKAEDIFGEMEEKG-FDKCVVAYSSLISMYGKTGRLKDAM 455
Query: 250 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 309
R L +++ + ++ Y L+ ++G+ NL +V ++W+ ++ +SY ++I
Sbjct: 456 RLLAKMKEKGCQPNVWIYNILMEMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIISAY 515
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
V + E+ ++E+ T D +M+G ++K R++ +L
Sbjct: 516 VKASEFEKCEQYYREFRMNGGTIDKAFGGIMVGVFSKTSRVDELVKL 562
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 107/266 (40%), Gaps = 11/266 (4%)
Query: 131 NCYCK----ELMTEKAEALLEKMKELNLGFS-SMPFNS-----LMTLYAKTGHPEKIPAI 180
CYC+ L +E ++E E+ S S PF++ L AK+G +
Sbjct: 223 GCYCRVMEAYLKLGDSERVMELFNEVESRISVSTPFSTKIYGILCESLAKSGRVFESLEF 282
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
++M+ I D Y+ + A++ ++ AE + E K ++ D F L +YV
Sbjct: 283 FRDMRKKGIAEDYTIYSALICTFASIQEVKLAEDLYNEAKAK-KLLRDPAMFLKLILMYV 341
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
+ G EKA ++ +++ + ++ Y +++ L +
Sbjct: 342 QQGSLEKALEIVEVMKDFKIGVSDCIFCAIVNGYATRRGYEAAVKVYEKLIEDGCEPGQV 401
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
+Y + I + AE F E E + + +I Y K GRL++A L +
Sbjct: 402 TYASAINAYCRVGLYSKAEDIFGEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKM 461
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMK 386
+ +G PN + I + + + ++K
Sbjct: 462 KEKGCQPNVWIYNILMEMHGKAKNLK 487
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 110/271 (40%), Gaps = 6/271 (2%)
Query: 133 YCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPD 192
Y K M + + +++K + S + +M Y K G E++ + E+++ +
Sbjct: 197 YNKLHMHKSTIMVFQRLKSARIEADSGCYCRVMEAYLKLGDSERVMELFNEVESRISVST 256
Query: 193 SYT---YNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
++ Y + +LA + + +M++ G +A D+T +S L + + AE
Sbjct: 257 PFSTKIYGILCESLAKSGRVFESLEFFRDMRKKG-IAEDYTIYSALICTFASIQEVKLAE 315
Query: 250 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 309
E + + RD + + LI +Y Q G+L + I ++ ++ + ++
Sbjct: 316 DLYNEAKAKKLLRDPAMFLKLILMYVQQGSLEKALEIVEVMKDFKIGVSDCIFCAIVNGY 375
Query: 310 VNLKDLPGAEKCF-KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 368
+ A K + K E GC + + I AY + G AE++ +G D
Sbjct: 376 ATRRGYEAAVKVYEKLIEDGCEPGQVTYASA-INAYCRVGLYSKAEDIFGEMEEKGFDKC 434
Query: 369 AKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ Y + G +K A+ L K + G
Sbjct: 435 VVAYSSLISMYGKTGRLKDAMRLLAKMKEKG 465
>gi|225423724|ref|XP_002276864.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Vitis vinifera]
Length = 587
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 126/334 (37%), Gaps = 39/334 (11%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL--PETSKNHLTYGSLLN 131
A+++ E M++ + + + ++L K A F ++ + N T+ +L+N
Sbjct: 257 AVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVN 316
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ +E + EKAE + E+++E L +N+LM Y++ G P I M+ P
Sbjct: 317 AFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEP 376
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D +YN+ + A A+ V E MKR G + + L S Y AG K E
Sbjct: 377 DRASYNIMVDAYGRAGLHEDAQAVFEVMKRLG-ITPTMKSHMLLLSAYSRAGKVAKCEEI 435
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
+ ++ D ++ LYG+ G ++
Sbjct: 436 VNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKM---------------------------- 467
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
E+ E G DI N++I Y + G EEL R P+ T
Sbjct: 468 -------EEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVT 520
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAIDTG-RGDGG 404
W Y R ++ E+ ID G DGG
Sbjct: 521 WTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGG 554
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 148/377 (39%), Gaps = 53/377 (14%)
Query: 94 AIHLDLVAKVQGIDA---------AENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKA 142
+ H D++ IDA AE+ +++L E TY LL YC + EKA
Sbjct: 163 SFHPDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKA 222
Query: 143 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 202
EA+ +M++ S++ +N+ + K G +K I + MK P + TY + +
Sbjct: 223 EAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINL 282
Query: 203 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 262
+ A +V EM R + + TF+ L + + GL EKAE ++L+
Sbjct: 283 YGKASKSYMALKVFHEM-RSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEP 341
Query: 263 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 322
D+ AY L+ Y + G FP GA + F
Sbjct: 342 DVYAYNALMEAYSRAG---------------FPY--------------------GAAEIF 366
Query: 323 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 382
+ D N+M+ AY + G E+A+ + E +R G P K+ + Y R
Sbjct: 367 SLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRA 426
Query: 383 GDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDD 442
G + C E+ ++ G K P + + + + + + + E L ++K
Sbjct: 427 GKV---AKC-EEIVNQMHKSGIK--PDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYP 480
Query: 443 LGVEVFEPLIRTYAAAG 459
+ + LI Y AG
Sbjct: 481 ADISTYNILINIYGRAG 497
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 78/197 (39%), Gaps = 1/197 (0%)
Query: 187 SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE 246
SS PD YN+ + A + AE E+ + R T++ L Y +GL E
Sbjct: 162 SSFHPDVICYNLLIDAYGQKSLYKKAESTYLEL-LEARCVPTEDTYALLLKAYCTSGLLE 220
Query: 247 KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI 306
KAE E+ Y I + G+ + I+ ++ + +Y +I
Sbjct: 221 KAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLI 280
Query: 307 QVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD 366
+ A K F E S +I ++ A+A+EG E AEE+ E+ + G +
Sbjct: 281 NLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLE 340
Query: 367 PNAKTWEIFSDYYLRNG 383
P+ + + Y R G
Sbjct: 341 PDVYAYNALMEAYSRAG 357
>gi|357138821|ref|XP_003570985.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Brachypodium distachyon]
Length = 613
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/370 (21%), Positives = 148/370 (40%), Gaps = 15/370 (4%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQG-IDAAENYFVDLPETSK-NHLTYGSLLNCYCKELM 138
M++ G+ + + +LD + K + + A E Y E + N TY ++N Y K
Sbjct: 248 MQEHGIPPSATVYNAYLDGLLKARCTVKAVEVYQRMKKERCRTNTETYTLMINVYGKSKQ 307
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
A + +M+ + + + +L+ +A+ G EK + ++M+ + PD Y YN
Sbjct: 308 PMSAMKIFNEMQSIGCKANICTYTALVNAFAREGLCEKAEEVFEQMQQAGHEPDVYAYNA 367
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
M A + GA + M+ G D +++ L Y AGL +AE + L+ +
Sbjct: 368 LMEAYSRAGFPQGASEIFSLMQHMG-CEPDRASYNILVDAYGRAGLHREAEATFESLKQQ 426
Query: 259 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 318
+ ++ L++ + ++GN+ ++ L + + M+ L
Sbjct: 427 GMAPTMKSHMLLLSAHARSGNVGRCEQVMAQLHKSGLRPDTFALNAMLHAYARAGRLDDM 486
Query: 319 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR-----GADPNAKTWE 373
E+ + + D+ NV + AYA+ G L E E RRR G D + +W
Sbjct: 487 ERLLAAMDLA-GSADVGSHNVAVNAYARAGYLGRMEAAFEGIRRRKGKKGGIDADVVSWT 545
Query: 374 IFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 433
Y R + ++ E+ +D G P + T + M E+ V+ +
Sbjct: 546 SRMGGYARKKEYGKCLEIFEEMVDAG------CYPDAGTAKVLMAACSDERQVEQVAAIV 599
Query: 434 EILKKAVDDL 443
+ K L
Sbjct: 600 RSMHKEAKTL 609
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 133/317 (41%), Gaps = 22/317 (6%)
Query: 97 LDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNL 154
+D + + ++ AE+ + + E TY LL YC +AE ++ +M+E +
Sbjct: 194 IDAYGRKRQLNKAESIYAAVLEAQCVPTEDTYALLLRAYCNARSLHRAEGVISEMQEHGI 253
Query: 155 GFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAER 214
S+ +N+ + K K + Q MK ++ TY + + A +
Sbjct: 254 PPSATVYNAYLDGLLKARCTVKAVEVYQRMKKERCRTNTETYTLMINVYGKSKQPMSAMK 313
Query: 215 VIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLY 274
+ EM+ G A+ T++ L + + GL EKAE ++++ D+ AY L+ Y
Sbjct: 314 IFNEMQSIG-CKANICTYTALVNAFAREGLCEKAEEVFEQMQQAGHEPDVYAYNALMEAY 372
Query: 275 GQTG---NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG----AEKCFKEWES 327
+ G SE++ + + + P+ A+ + +LV+ G AE F+ +
Sbjct: 373 SRAGFPQGASEIFSLMQHMGCE-PDRASYN------ILVDAYGRAGLHREAEATFESLKQ 425
Query: 328 GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG---D 384
++ +++ A+A+ G + E++ + + G P+ Y R G D
Sbjct: 426 QGMAPTMKSHMLLLSAHARSGNVGRCEQVMAQLHKSGLRPDTFALNAMLHAYARAGRLDD 485
Query: 385 MK--LAVDCLEKAIDTG 399
M+ LA L + D G
Sbjct: 486 MERLLAAMDLAGSADVG 502
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/262 (17%), Positives = 108/262 (41%), Gaps = 1/262 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+ Y L++ Y ++ KAE++ + E + + L+ Y + +I E
Sbjct: 188 ICYNLLIDAYGRKRQLNKAESIYAAVLEAQCVPTEDTYALLLRAYCNARSLHRAEGVISE 247
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ I P + YN ++ L A V + MK++ R + T++ + ++Y ++
Sbjct: 248 MQEHGIPPSATVYNAYLDGLLKARCTVKAVEVYQRMKKE-RCRTNTETYTLMINVYGKSK 306
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
A + E+++ ++ Y L+ + + G + ++ ++ A +Y
Sbjct: 307 QPMSAMKIFNEMQSIGCKANICTYTALVNAFAREGLCEKAEEVFEQMQQAGHEPDVYAYN 366
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+++ GA + F + D N+++ AY + G AE E +++
Sbjct: 367 ALMEAYSRAGFPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHREAEATFESLKQQ 426
Query: 364 GADPNAKTWEIFSDYYLRNGDM 385
G P K+ + + R+G++
Sbjct: 427 GMAPTMKSHMLLLSAHARSGNV 448
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 83/198 (41%), Gaps = 3/198 (1%)
Query: 187 SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE 246
SS PD YN+ + A ++ AE + + V + T++ L Y A
Sbjct: 181 SSFRPDIICYNLLIDAYGRKRQLNKAESIYAAVLEAQCVPTE-DTYALLLRAYCNARSLH 239
Query: 247 KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI 306
+AE + E++ + Y + + + +++ ++ T +Y MI
Sbjct: 240 RAEGVISEMQEHGIPPSATVYNAYLDGLLKARCTVKAVEVYQRMKKERCRTNTETYTLMI 299
Query: 307 QVLVNLKDLPGAEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
V K A K F E +S GC +I ++ A+A+EG E AEE+ E+ ++ G
Sbjct: 300 NVYGKSKQPMSAMKIFNEMQSIGCKA-NICTYTALVNAFAREGLCEKAEEVFEQMQQAGH 358
Query: 366 DPNAKTWEIFSDYYLRNG 383
+P+ + + Y R G
Sbjct: 359 EPDVYAYNALMEAYSRAG 376
>gi|356577604|ref|XP_003556914.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g32630-like [Glycine max]
Length = 619
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 116/254 (45%), Gaps = 5/254 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N T+G+L++ CK E AE LLE+M+ + + + FN++M Y K G ++ +
Sbjct: 321 NTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMDGYCKRGMMDEAFRLQ 380
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M+ D +TYN+ L ++ A+RV+ M G VA + T + IY +
Sbjct: 381 DIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKG-VAPNVVTCATFIEIYCQ 439
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTAN 299
G + ER L+ +E R ++ Y LI Y + + + + + + + P+
Sbjct: 440 EGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVEKGLLPDV-- 497
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+Y ++I + + A K F E +++ +I +KEGR + A +L +
Sbjct: 498 FTYTSLIHGECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSKEGRADEALKLYDE 557
Query: 360 ARRRGADPNAKTWE 373
R G P+ + +E
Sbjct: 558 MMRMGLIPDDRVFE 571
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 133/307 (43%), Gaps = 13/307 (4%)
Query: 152 LNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISG 211
+++G S+ ++ + + G + ++ EM A ++P +TYN + A D G
Sbjct: 178 VDIGVQSLTI--VVDVLCRRGEVGRAKELMNEMAARGVVPTVFTYNTLLNACVVRKDREG 235
Query: 212 AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 271
+ ++ M+R+G V A T++ L Y + +AE+ +E+ RN D+ Y +I
Sbjct: 236 VDEILGLMEREG-VVASLVTYTILIEWYASSERIGEAEKVYEEMCERNVEMDVYVYTSMI 294
Query: 272 TLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGC 329
+ + GN+ ++ + R PNT L I + + AE +E +
Sbjct: 295 SWNCRAGNVRRASALFDEMICRGIVPNTXTFGAL--ISGVCKAGQMEAAEILLEEMQCKG 352
Query: 330 ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 389
++ + N M+ Y K G ++ A L++ R+G + + T+ I + + + A
Sbjct: 353 VDLNVVIFNTMMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAK 412
Query: 390 DCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFE 449
L ++ G P+ T TF+ + QE ++ E FL ++K + +
Sbjct: 413 RVLNVMVEKG------VAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYN 466
Query: 450 PLIRTYA 456
LI Y+
Sbjct: 467 TLIDAYS 473
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 109/251 (43%), Gaps = 5/251 (1%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY L+ Y +AE + E+M E N+ + S+++ + G+ + A+ E
Sbjct: 253 VTYTILIEWYASSERIGEAEKVYEEMCERNVEMDVYVYTSMISWNCRAGNVRRASALFDE 312
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M I+P++ T+ + + + AE ++EEM+ G V + F+ + Y + G
Sbjct: 313 MICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKG-VDLNVVIFNTMMDGYCKRG 371
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANIS 301
+ ++A R +E + D+ Y L + + E R+ + + PN ++
Sbjct: 372 MMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNV--VT 429
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
I++ +L E+ + E +I N +I AY+K +++ A LK
Sbjct: 430 CATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMV 489
Query: 362 RRGADPNAKTW 372
+G P+ T+
Sbjct: 490 EKGLLPDVFTY 500
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 164/391 (41%), Gaps = 43/391 (10%)
Query: 25 LYDRLFKKG--SSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENME 82
L DR+ + G ++V+ L KS + E+ L+K+ +RK+ A+K S ++
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL---LRKMEERKIKLDAVKYSIIID 255
Query: 83 KRGMNKTVS-DQAIHLDLVAKVQGIDAAENYFVDLP----------------------ET 119
G+ K S D A +L +++G A + L +
Sbjct: 256 --GLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI 313
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
+ + + + +L++C+ KE +AE L ++M + + ++ + SL+ + K +K
Sbjct: 314 TPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANH 373
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
++ M + P+ T+N+ + N I + +M G V AD T++ L +
Sbjct: 374 MLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG-VVADTVTYNTLIQGF 432
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
E G E A+ +E+ +R D+ +Y+ L+ G + I+ + + +
Sbjct: 433 CELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKS-KMELD 491
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY------DIRVTNVMIGAYAKEGRLENA 353
I N+I + + A K W+ C+ D++ N+MIG K+G L A
Sbjct: 492 IGIYNII-----IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA 546
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNGD 384
+ L + G PN T+ I +L GD
Sbjct: 547 DLLFRKMEEDGHSPNGCTYNILIRAHLGEGD 577
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 113/275 (41%), Gaps = 5/275 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TYG +L CK T A LL KM+E + ++ ++ ++ K G + +
Sbjct: 211 NEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLF 270
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EM+ D Y +R +++ +M + ++ D FS L +V+
Sbjct: 271 NEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR-KITPDVVAFSALIDCFVK 329
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTAN 299
G +AE KE+ R D Y LI + + L + + + + PN
Sbjct: 330 EGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRT 389
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+ L NL D G E F++ D N +I + + G+LE A+EL +
Sbjct: 390 FNILINGYCKANLID-DGLE-LFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQE 447
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
R P+ +++I D NG+ + A++ EK
Sbjct: 448 MVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEK 482
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/349 (19%), Positives = 138/349 (39%), Gaps = 11/349 (3%)
Query: 114 VDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGH 173
++L + N T ++NC C+ A + + K+ +L ++ F++L+ G
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157
Query: 174 PEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFS 233
+ ++ M P T N + L +S A +I+ M G + T+
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETG-FQPNEVTYG 216
Query: 234 NLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 293
+ + ++G A L+++E R D Y +I + G+L + ++ + +
Sbjct: 217 PVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 276
Query: 294 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
I Y +I+ K ++ T D+ + +I + KEG+L A
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREA 336
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETI 413
EEL + +RG P+ T+ D + + + A L+ + G G P+ T
Sbjct: 337 EELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG------PNIRTF 390
Query: 414 RTFMRHFEQEKDV-DGAEGFLEI-LKKAVDDLGVEVFEPLIRTYAAAGR 460
+ + + + DG E F ++ L+ V D + LI+ + G+
Sbjct: 391 NILINGYCKANLIDDGLELFRKMSLRGVVAD--TVTYNTLIQGFCELGK 437
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 123/279 (44%), Gaps = 12/279 (4%)
Query: 159 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 218
+P SL+ + + G +K +++ ++ S +PD TYNV + +I A +V++
Sbjct: 150 IPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDR 209
Query: 219 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 278
M VA D T++ + ++G ++A L + + D+ Y LI +
Sbjct: 210 MN----VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKES 265
Query: 279 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES-GCATYDIRVT 337
+ + ++ +R ++Y +I + L A K S GC ++
Sbjct: 266 GVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQP-NVITH 324
Query: 338 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
N+++ + GR +AE+L R+G P+ T+ I ++ R G + A+D LEK
Sbjct: 325 NIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPM 384
Query: 398 TGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 436
G P+S + + F +EK +D A +L+I+
Sbjct: 385 HG------CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 417
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 133/320 (41%), Gaps = 15/320 (4%)
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
E + +TY L+ CKE +A LL++M+ + +N L+ K G ++
Sbjct: 246 ECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEA 305
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
+ M + P+ T+N+ +R++ + AE+++ +M R G + TF+ L +
Sbjct: 306 IKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKG-CSPSVVTFNILIN 364
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS---EVYRIWRSLRLAF 294
GL +A L+++ + +Y L+ + + + E I S R +
Sbjct: 365 FLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVS-RGCY 423
Query: 295 PNTANISYLNMIQVLVNLKDLPGAEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENA 353
P+ ++Y ++ L + A + + S GC+ I N +I +K G+ E A
Sbjct: 424 PDI--VTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLI-TYNTVIDGLSKVGKTERA 480
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETI 413
+L + RR+G P+ T+ R G + A+ +G P++ T
Sbjct: 481 IKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDL------EGLGIRPNAITY 534
Query: 414 RTFMRHFEQEKDVDGAEGFL 433
+ M + + D A FL
Sbjct: 535 NSIMLGLCKSRQTDRAIDFL 554
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 88/185 (47%), Gaps = 3/185 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP--ETSKNHLTYGSLLN 131
A KL +M ++G + +V I ++ + + + A + +P + N L+Y LL+
Sbjct: 340 AEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLH 399
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+CKE ++A L+ M + +N+L+T K G + I+ ++ + P
Sbjct: 400 GFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSP 459
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
TYN + L+ V A ++++EM+R G + D T+S+L S G ++A +
Sbjct: 460 VLITYNTVIDGLSKVGKTERAIKLLDEMRRKG-LKPDIITYSSLVSGLSREGKVDEAIKF 518
Query: 252 LKELE 256
+LE
Sbjct: 519 FHDLE 523
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/276 (17%), Positives = 117/276 (42%), Gaps = 4/276 (1%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY L++ YCK + A +L++M N+ + +N+++ +G ++ ++
Sbjct: 185 ITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDR 241
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
PD TY + + A + + A ++++EM+ G D T++ L + + G
Sbjct: 242 QLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGS-KPDVVTYNVLINGICKEG 300
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
++A + L + + ++ + ++ TG + ++ + + + +++
Sbjct: 301 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 360
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I L L A ++ T + N ++ + KE +++ A E + R
Sbjct: 361 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 420
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
G P+ T+ ++G + +AV+ L + G
Sbjct: 421 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKG 456
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/314 (19%), Positives = 119/314 (37%), Gaps = 7/314 (2%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY ++L C ++A +L++ + + + L+ K + ++ E
Sbjct: 217 VTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDE 276
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ PD TYNV + + + A + + M G + T + + G
Sbjct: 277 MRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYG-CQPNVITHNIILRSMCSTG 335
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
+ AE+ L ++ + + + LI + G L I + + ++SY
Sbjct: 336 RWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYN 395
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
++ K + A + S DI N ++ A K+G+++ A E+ + +
Sbjct: 396 PLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSK 455
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQE 423
G P T+ D + G + A+ K +D R G K P T + + +E
Sbjct: 456 GCSPVLITYNTVIDGLSKVGKTERAI----KLLDEMRRKGLK--PDIITYSSLVSGLSRE 509
Query: 424 KDVDGAEGFLEILK 437
VD A F L+
Sbjct: 510 GKVDEAIKFFHDLE 523
>gi|302780869|ref|XP_002972209.1| hypothetical protein SELMODRAFT_96926 [Selaginella moellendorffii]
gi|300160508|gb|EFJ27126.1| hypothetical protein SELMODRAFT_96926 [Selaginella moellendorffii]
Length = 363
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 121/283 (42%), Gaps = 10/283 (3%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMP----FNSLMTLYAKTGHPEKI 177
N +TY SL++ +C MT ++ L M+E+ +P +N+L+ KTG ++
Sbjct: 9 NMVTYNSLIHGFC---MTNGVDSTLLLMEEMT-ATGCLPDINTYNTLIDGLCKTGRVPEV 64
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
+ EMKA PD TY+ + ++ I+ A + ++M + + D TF L
Sbjct: 65 NRLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAAL-PDVVTFPTLVE 123
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
Y AGL + AER L+E+ + D+ Y L+ + + + E +R+ + +
Sbjct: 124 GYCNAGLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLKRMAKGECQP 183
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
+ Y +I + A K +E + +IG + G LE A ++
Sbjct: 184 NVVIYTALIDAFCSAGKPTVAYKLLEEMVGNGVQPNAITYRSLIGGFCGTGDLEEAHKML 243
Query: 358 ERA-RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
ER R + + + D R G M A++ LE +G
Sbjct: 244 ERLERNENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSG 286
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 125/288 (43%), Gaps = 22/288 (7%)
Query: 76 KLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCY 133
+L M+ + N V + + K+ I+ A F D+ + + + +T+ +L+ Y
Sbjct: 66 RLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPTLVEGY 125
Query: 134 CKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDS 193
C + + AE LLE++ + + SL+ + K + +++ M P+
Sbjct: 126 CNAGLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLKRMAKGECQPNV 185
Query: 194 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 253
Y + A + + A +++EEM +G V + T+ +L + G E+A + L+
Sbjct: 186 VIYTALIDAFCSAGKPTVAYKLLEEMVGNG-VQPNAITYRSLIGGFCGTGDLEEAHKMLE 244
Query: 254 ELE-NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI--QVLV 310
LE N N D+ AY+ ++ +TG +S + +++ + + Y+ +I ++ +
Sbjct: 245 RLERNENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGEMTL 304
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+ K P A +V +I A+EGR E A L +
Sbjct: 305 SRKGRPNA----------------KVYEAVIQELAREGRHEKANALSD 336
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/257 (19%), Positives = 107/257 (41%), Gaps = 11/257 (4%)
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M I P+ TYN + N + ++EEM G D T++ L + G
Sbjct: 1 MTIWGIEPNMVTYNSLIHGFCMTNGVDSTLLLMEEMTATG-CLPDINTYNTLIDGLCKTG 59
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANIS 301
+ R E++ + + D+ Y LI + + ++ ++ + + A P+ ++
Sbjct: 60 RVPEVNRLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDV--VT 117
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
+ +++ N + AE+ +E + + D+ ++ + K R+ A + +R
Sbjct: 118 FPTLVEGYCNAGLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLKRMA 177
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
+ PN + D + G +A LE+ + G+G + P++ T R+ + F
Sbjct: 178 KGECQPNVVIYTALIDAFCSAGKPTVAYKLLEEMV----GNGVQ--PNAITYRSLIGGFC 231
Query: 422 QEKDVDGAEGFLEILKK 438
D++ A LE L++
Sbjct: 232 GTGDLEEAHKMLERLER 248
>gi|297837133|ref|XP_002886448.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
gi|297332289|gb|EFH62707.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
Length = 332
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 117/279 (41%), Gaps = 36/279 (12%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TYG+++N CK T+ A LL KM E ++ + + +++ K GH K +
Sbjct: 44 NEVTYGTIVNGMCKMGDTDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLF 103
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EM I P+ TYN + + + AE+++ +M + V D TF+ L + +V+
Sbjct: 104 TEMHDKGIFPNVLTYNCMIDGCCSYGKWTDAEQLLRDMI-ESNVDPDVVTFNALINAFVK 162
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G +AE +E+ RN FP+T I+
Sbjct: 163 EGKISEAEELYREMLGRN---------------------------------IFPDT--IT 187
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y ++I L A+ F S + ++ N +IG + R+++ +L
Sbjct: 188 YNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIKLLHEML 247
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 400
RRG P++ ++ + + GD+ A D ++ I R
Sbjct: 248 RRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEMISQVR 286
>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
Length = 671
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 157/383 (40%), Gaps = 20/383 (5%)
Query: 65 LRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK--- 121
L R+ A + E M RG+ V +D + K+ + A F+ L ++S
Sbjct: 261 LCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKP 320
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N TY ++ YC+E +AE LL +M E L ++ + +L+ + K G ++ ++
Sbjct: 321 NVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELM 380
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+MK +P+ YTYN + I A +V+ G + D T++ L + + +
Sbjct: 381 NKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQG-LKFDKITYTILITEHCK 439
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW-RSLRLAFPNTANI 300
G A + D+ AY LI+ Y Q + E + + + L + T
Sbjct: 440 QGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQ- 498
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+Y +MI + A + F+ ++GC I +I KE RLE A+ L E
Sbjct: 499 TYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSI-TYGALISGLCKESRLEEAKALYEG 557
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
+ P T + Y R +AV L+ R D + V T+ +R
Sbjct: 558 MLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLD------RLDKRQQV---HTVDVVVRK 608
Query: 420 FEQEKDVDGAEGFLEILKKAVDD 442
DVD A F LKK +D+
Sbjct: 609 LSALGDVDAASLF---LKKVLDE 628
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 122/283 (43%), Gaps = 4/283 (1%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK-I 177
T N + Y + ++ CK ++A +LE+M L + +L+ K G E+
Sbjct: 247 TPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAF 306
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
++ +K+SS P+ +TY V + ++ AE ++ M G + + T++ L
Sbjct: 307 RLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQG-LKPNTNTYTTLIG 365
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
+ + G F++A + +++ ++ Y +I + + G + E Y++ R
Sbjct: 366 GHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKF 425
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCF-KEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
I+Y +I + A F + E+GC DI +I Y ++ ++E +++
Sbjct: 426 DKITYTILITEHCKQGHITYALDLFDRMVENGCCP-DIEAYTSLISTYCQQRQMEESQKF 484
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
++ G P +T+ Y + G LA+ E+ + G
Sbjct: 485 FDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNG 527
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/344 (18%), Positives = 139/344 (40%), Gaps = 18/344 (5%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
++ +L+ C+E E+ +ALL M + ++ + G + + + M
Sbjct: 183 SFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRM 242
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ P+ Y W+ L + A V+EEM G + + T + L + G
Sbjct: 243 LETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRG-LKPNVYTHTTLIDGLCKIGW 301
Query: 245 FEKAERALKELENRNAHR-DLSAYQFLITLYGQTGNLSE-----VYRIWRSLRLAFPNTA 298
E+A R +L ++++ ++ Y +I Y + G L+ V + + L+ PNT
Sbjct: 302 TERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLK---PNTN 358
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+Y +I A + + + +I N +I + K+G+++ A ++
Sbjct: 359 --TYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLR 416
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 418
A +G + T+ I + + G + A+D ++ ++ G P E + +
Sbjct: 417 MATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENG------CCPDIEAYTSLIS 470
Query: 419 HFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTS 462
+ Q++ ++ ++ F + + + +I Y GR++
Sbjct: 471 TYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRST 514
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 129/292 (44%), Gaps = 4/292 (1%)
Query: 104 QGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPF 161
+G DA E F ++ E + NH+TY ++++ + K E +L ++M L +++ +
Sbjct: 211 RGGDAVE-VFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITY 269
Query: 162 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 221
N L++ + G + A++ EM + ++PD +TY++ L+ D + + +
Sbjct: 270 NVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLK 329
Query: 222 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 281
+G D+T S L + + G AE L+ L N Y LI Y QTG L
Sbjct: 330 NGVTIGDYTC-SILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELE 388
Query: 282 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 341
+ + ++ +I+Y +I L + + A+ E + + N +I
Sbjct: 389 GAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLI 448
Query: 342 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
AY + G+LE + + G PN ++ + + +NG + AV L+
Sbjct: 449 DAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILD 500
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 116/277 (41%), Gaps = 10/277 (3%)
Query: 121 KNHLTYGS-----LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
KN +T G LLN CK+ AE +L+ + L + + +N+L+ Y +TG E
Sbjct: 329 KNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELE 388
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
+ +MK+ I PD TYN + L I+ A+ ++ EM+ +G V TF+ L
Sbjct: 389 GAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNG-VNPTVETFNTL 447
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLA 293
Y G EK L E++ ++ +Y ++ + + G + E I + +
Sbjct: 448 IDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDV 507
Query: 294 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
PN Y +I V A ++ +S + I N++I + ++ A
Sbjct: 508 LPNAQ--VYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEA 565
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
EE+ P+A ++ G++ A+D
Sbjct: 566 EEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALD 602
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 104/215 (48%), Gaps = 9/215 (4%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHL-----TYGSLLNCYCK 135
M+ G+N TV +D + + E F+ L E +N L +YGS++N +CK
Sbjct: 432 MQDNGVNPTVETFNTLIDAYGRTGQL---EKCFIVLSEMQENGLKPNVVSYGSIVNAFCK 488
Query: 136 ELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYT 195
+A A+L+ M ++ ++ +N+++ Y + G ++ ++++MK++ I P T
Sbjct: 489 NGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVT 548
Query: 196 YNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 255
YN+ ++ L + IS AE +I + + R+ D +++ L S G +KA + +
Sbjct: 549 YNLLIKGLCNQSQISEAEEIINSLS-NHRLIPDAVSYNTLISACCYRGNIDKALDLQQRM 607
Query: 256 ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
+ Y LI+ G G L E+ +++ +
Sbjct: 608 HKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKM 642
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 116/267 (43%), Gaps = 9/267 (3%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+H+TY +L+N CK A+ LL +M++ + + FN+L+ Y +TG EK ++
Sbjct: 405 DHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVL 464
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYV 240
EM+ + + P+ +Y + A I A ++++M +D V + ++ + YV
Sbjct: 465 SEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKD--VLPNAQVYNAIIDAYV 522
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL---RLAFPNT 297
E G ++A ++++++ + Y LI +SE I SL RL P+
Sbjct: 523 EHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRL-IPDA 581
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
+SY +I ++ A + +R + +I GRL E L
Sbjct: 582 --VSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLY 639
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGD 384
++ + P+ I + Y + G+
Sbjct: 640 QKMMQNNVVPSNAIHNIMVEAYSKYGN 666
>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
Length = 563
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 157/383 (40%), Gaps = 20/383 (5%)
Query: 65 LRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK--- 121
L R+ A + E M RG+ V +D + K+ + A F+ L ++S
Sbjct: 153 LCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKP 212
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N TY ++ YC+E +AE LL +M E L ++ + +L+ + K G ++ ++
Sbjct: 213 NVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELM 272
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+MK +P+ YTYN + I A +V+ G + D T++ L + + +
Sbjct: 273 NKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQG-LKFDKITYTILITEHCK 331
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW-RSLRLAFPNTANI 300
G A + D+ AY LI+ Y Q + E + + + L + T
Sbjct: 332 QGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQ- 390
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+Y +MI + A + F+ ++GC D +I KE RLE A+ L E
Sbjct: 391 TYTSMIAGYCKVGRSTLALRVFERMVQNGCFA-DSITYGALISGLCKESRLEEAKALYEG 449
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
+ P T + Y R +AV L+ R D + V T+ +R
Sbjct: 450 MLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLD------RLDKRQQV---HTVDVVVRK 500
Query: 420 FEQEKDVDGAEGFLEILKKAVDD 442
DVD A F LKK +D+
Sbjct: 501 LSALGDVDAASLF---LKKVLDE 520
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 122/283 (43%), Gaps = 4/283 (1%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK-I 177
T N + Y + ++ CK ++A +LE+M L + +L+ K G E+
Sbjct: 139 TPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAF 198
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
++ +K+SS P+ +TY V + ++ AE ++ M G + + T++ L
Sbjct: 199 RLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQG-LKPNTNTYTTLIG 257
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
+ + G F++A + +++ ++ Y +I + + G + E Y++ R
Sbjct: 258 GHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKF 317
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCF-KEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
I+Y +I + A F + E+GC DI +I Y ++ ++E +++
Sbjct: 318 DKITYTILITEHCKQGHITYALDLFDRMVENGCCP-DIEAYTSLISTYCQQRQMEESQKF 376
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
++ G P +T+ Y + G LA+ E+ + G
Sbjct: 377 FDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNG 419
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/343 (18%), Positives = 139/343 (40%), Gaps = 18/343 (5%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
+G+L+ C+E E+ +ALL M + ++ + G + + + M
Sbjct: 76 FGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRML 135
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
+ P+ Y W+ L + A V+EEM G + + T + L + G
Sbjct: 136 ETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRG-LKPNVYTHTTLIDGLCKIGWT 194
Query: 246 EKAERALKELENRNAHR-DLSAYQFLITLYGQTGNLSE-----VYRIWRSLRLAFPNTAN 299
E+A R +L ++++ ++ Y +I Y + G L+ V + + L+ PNT
Sbjct: 195 ERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLK---PNTN- 250
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+Y +I A + + + +I N +I + K+G+++ A ++
Sbjct: 251 -TYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRM 309
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
A +G + T+ I + + G + A+D ++ ++ G P E + +
Sbjct: 310 ATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENG------CCPDIEAYTSLIST 363
Query: 420 FEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTS 462
+ Q++ ++ ++ F + + + +I Y GR++
Sbjct: 364 YCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRST 406
>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 456
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 110/253 (43%), Gaps = 1/253 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N ++YG+LLN CK T A L +++ + G + + +N+++ K +
Sbjct: 156 NQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFY 215
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EM A I P+ TY + ++GA ++ EM + + T++ L +
Sbjct: 216 SEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILK-NINPNVYTYAILIDALCK 274
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G ++A+ L E+ R D+ Y L+ + + NL + ++ ++ +
Sbjct: 275 EGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYT 334
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I L L A+K F++ D+ NVMIG KEG L+ A +K +
Sbjct: 335 YTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKME 394
Query: 362 RRGADPNAKTWEI 374
G PN T+EI
Sbjct: 395 DNGCIPNVVTFEI 407
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 72/156 (46%), Gaps = 1/156 (0%)
Query: 116 LPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
L + N TY L++ CKE ++A+ LL +M + + SL+ + K + +
Sbjct: 255 LKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLD 314
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
K A+ +MK I P+ YTY + L + A+++ +++ G D T++ +
Sbjct: 315 KATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKG-CCIDVCTYNVM 373
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 271
+ G+ ++A ++E+ ++ ++ +I
Sbjct: 374 IGGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEIII 409
>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 917
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 123/271 (45%), Gaps = 5/271 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ +T+ SLL + + E A L ++M + +N+L+ K G + I+
Sbjct: 338 DRITFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEIL 397
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+M A IMP+ +Y+ + A A + EM R +A D +++ L SIY +
Sbjct: 398 AQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEM-RYLNIALDRVSYNTLLSIYTK 456
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR--LAFPNTAN 299
G E+A L+E+ + +D+ Y L+ YG+ G EV +++ ++ PN
Sbjct: 457 VGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNL-- 514
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
++Y +I A + F+E++S D+ + + +I A K G + +A L +
Sbjct: 515 LTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDE 574
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
+ G PN T+ D + R+ M+ + D
Sbjct: 575 MTKEGISPNVVTYNSIIDAFGRSATMERSAD 605
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 97/211 (45%), Gaps = 3/211 (1%)
Query: 70 LYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP--ETSKNHLTYG 127
L+ A L + M R + + V LD + K +D A +P N ++Y
Sbjct: 354 LWEAARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYS 413
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 187
++++ + K ++A L +M+ LN+ + +N+L+++Y K G E+ I++EM +
Sbjct: 414 TVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASV 473
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
I D TYN + ++V EMKR+ V + T+S L Y + GL+++
Sbjct: 474 GIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKRE-HVLPNLLTYSTLIDGYSKGGLYKE 532
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTG 278
A +E ++ D+ Y LI + G
Sbjct: 533 AMEVFREFKSAGLRADVVLYSALIDALCKNG 563
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/275 (18%), Positives = 118/275 (42%), Gaps = 2/275 (0%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEM 184
+ +L++ Y + + E+A ++ MKE L + + +N+++ K G +++ EM
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ + + PD T+N + + A + +EM + R+ D +++ L + G
Sbjct: 331 QRNCVQPDRITFNSLLAVCSRGGLWEAARNLFDEMS-NRRIEQDVFSYNTLLDAICKGGQ 389
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+ A L ++ + ++ +Y +I + + G E ++ +R +SY
Sbjct: 390 MDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYNT 449
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
++ + + A +E S D+ N ++G Y K+G+ + +++ +R
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREH 509
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
PN T+ D Y + G K A++ + G
Sbjct: 510 VLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAG 544
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
K+ +TY +LL Y K+ ++ + + +MK ++ + + +++L+ Y+K G ++ +
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEV 536
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL----- 235
+E K++ + D Y+ + AL + A +I+EM ++G ++ + T++++
Sbjct: 537 FREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG-ISPNVVTYNSIIDAFG 595
Query: 236 -------ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 276
++ Y G + AL EL +R +I L+GQ
Sbjct: 596 RSATMERSADYSNGGSLPFSSSALSELTETEGNR-------VIQLFGQ 636
>gi|302761794|ref|XP_002964319.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
gi|300168048|gb|EFJ34652.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
Length = 384
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 112/256 (43%), Gaps = 1/256 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S N TY +L+ Y ++ + ++A L ++M + +N + +Y K G E +
Sbjct: 120 SPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMER 179
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
++ EM + PD TYN + A + A ++ EM G WT L+S
Sbjct: 180 LLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSAR 239
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
E + E A + + L+++ ++ Y +++LYG+ G +E ++W + A
Sbjct: 240 KEQSVAE-ATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCI 298
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
I+Y +I+ + A CF++ D ++ ++ AY K GR AE L
Sbjct: 299 IAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFE 358
Query: 360 ARRRGADPNAKTWEIF 375
+ G P+ T+ I
Sbjct: 359 MTKEGFVPDGITYGIL 374
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 160/392 (40%), Gaps = 14/392 (3%)
Query: 74 ALKLSENMEKRGMNKTVSDQA--IHLDLVAKVQGIDAAENYFVDLPETSK--NHLTYGSL 129
A L M K G TV IH L K + +D A + E+ K + + Y L
Sbjct: 1 ACSLFYRMMKDGCEATVVTYTVIIHGYLRQKSK-LDHALRLLEVMKESGKKPDEILYNCL 59
Query: 130 LNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
+N E AE +L+ MK+ + + + + +L+ YA G + + QEMK
Sbjct: 60 VNGLVNSGRLEAAEKILDDMKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGE 119
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
P+S+TYN ++ A + +EM G A D T++ ++Y + GL E E
Sbjct: 120 SPNSWTYNALIQGYGRKGLFKEALELYDEMDGVG-CAKDVHTYNIAIAMYGKRGLLEDME 178
Query: 250 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 309
R L E++ + D Y L+ +Y + + + I R + A +Y M+
Sbjct: 179 RLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSA 238
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
+ + A + F+ +S +I + M+ Y + G A +L + G P
Sbjct: 239 RKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCI 298
Query: 370 KTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 429
+ + Y +G + A+ C + +G VP ++ M + + A
Sbjct: 299 IAYSGLIESYGHHGMYQEALACFQDMRKSG------IVPDTKIYTALMDAYGKAGRCREA 352
Query: 430 E-GFLEILKKAVDDLGVEVFEPLIRTYAAAGR 460
E + E+ K+ G+ + L+R +A AGR
Sbjct: 353 ELLYFEMTKEGFVPDGI-TYGILVRAFANAGR 383
>gi|326503836|dbj|BAK02704.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 399
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 122/322 (37%), Gaps = 43/322 (13%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N TY +L+N + +E + EKAE + E+M++ +N+LM Y++ G P+ I
Sbjct: 118 NICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGFPQAASEIF 177
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M+ PD +YN+ + A AE V E +KR G +A + L + +
Sbjct: 178 SLMQHMGCEPDRASYNILVDAYGRAGLHREAEAVFESLKRQG-MAPTMKSHMLLLAAHAR 236
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
+G + E + +L D A ++ YG+ G L ++ R+ ++
Sbjct: 237 SGNVARCEEVMAQLHKSGLAPDTIALNAMLNAYGRAGRLDDMERLLAAMERR-------- 288
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
T D+ NV + AY + G LE E
Sbjct: 289 ----------------------------GTRDVGTYNVAVNAYGRAGYLERMEAAFASLE 320
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
RRG + TW Y R + + ++ E+ +D G P + T + +
Sbjct: 321 RRGLAADVVTWTSRMGAYARKKEYRRCLEIFEEMVDAG------CYPDAGTAKVLVAACS 374
Query: 422 QEKDVDGAEGFLEILKKAVDDL 443
E+ V+ + + K L
Sbjct: 375 DERQVEQVTAIVRSMHKEAKTL 396
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 134/336 (39%), Gaps = 45/336 (13%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY LL YC +AE ++ +M+E + S+ +N+ + K EK + Q M
Sbjct: 16 TYALLLRAYCTAGSLHRAEGVISEMREHGIPPSATVYNAYLDGLLKARCAEKAVEVYQRM 75
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
K ++ TY + + A +V +EM+ G A+ T++ L + + GL
Sbjct: 76 KRERCRTNTETYTLMINVYGKSKQPMSAMKVFKEMQSIG-CKANICTYTALVNAFAREGL 134
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
EKAE +E++ D+ AY L+ Y + G FP A+ +
Sbjct: 135 CEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAG---------------FPQAAS-EIFS 178
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
++Q + GC D N+++ AY + G AE + E +R+G
Sbjct: 179 LMQHM------------------GCEP-DRASYNILVDAYGRAGLHREAEAVFESLKRQG 219
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 424
P K+ + + R+G++ + + + +G P + + + + +
Sbjct: 220 MAPTMKSHMLLLAAHARSGNVARCEEVMAQLHKSG------LAPDTIALNAMLNAYGRAG 273
Query: 425 DVDGAEGFLEIL-KKAVDDLGVEVFEPLIRTYAAAG 459
+D E L + ++ D+G + + Y AG
Sbjct: 274 RLDDMERLLAAMERRGTRDVG--TYNVAVNAYGRAG 307
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 86/196 (43%), Gaps = 3/196 (1%)
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
+P TY + +RA + AE VI EM+ G + T ++ ++A EKA
Sbjct: 10 CVPTEDTYALLLRAYCTAGSLHRAEGVISEMREHG-IPPSATVYNAYLDGLLKARCAEKA 68
Query: 249 ERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI-SYLNMIQ 307
+ ++ + Y +I +YG++ ++++ ++ + ANI +Y ++
Sbjct: 69 VEVYQRMKRERCRTNTETYTLMINVYGKSKQPMSAMKVFKEMQ-SIGCKANICTYTALVN 127
Query: 308 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
AE+ F+E + D+ N ++ AY++ G + A E+ + G +P
Sbjct: 128 AFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGFPQAASEIFSLMQHMGCEP 187
Query: 368 NAKTWEIFSDYYLRNG 383
+ ++ I D Y R G
Sbjct: 188 DRASYNILVDAYGRAG 203
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 143/325 (44%), Gaps = 14/325 (4%)
Query: 100 VAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFS 157
++ V ++ AE Y+ + + + TY L++ YCK EKA+ LL +M L +
Sbjct: 533 LSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPN 592
Query: 158 SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIE 217
+ + L+ Y K+ EK+ +I+Q M S PD++ Y + +R L+ ++ A V+
Sbjct: 593 ADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLT 652
Query: 218 EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQT 277
E++++G V D +S+L S + EKA L E+ + Y LI + ++
Sbjct: 653 EVEKNGLV-PDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRS 711
Query: 278 GNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 335
G++S ++ S+ + PN ++Y +I D+ A +KE D
Sbjct: 712 GDISRARNVFDSILAKGLVPNC--VTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAF 769
Query: 336 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 395
V NV+ + LE A L E RG N + + + G ++ L
Sbjct: 770 VYNVLATGCSDAADLEQALFLTEEMFNRGY-ANVSLFNTLVHGFCKRGKLQETEKLLHVM 828
Query: 396 IDTGRGDGGKWVPSSETIRTFMRHF 420
+D + VP+++T+ + F
Sbjct: 829 MDR------EIVPNAQTVEKVVSEF 847
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/334 (20%), Positives = 147/334 (44%), Gaps = 7/334 (2%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TYG+L+N CK ++A+ALL++M L + + + +L+ + K G +
Sbjct: 310 SPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFD 369
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I++EM ++ + P+ Y+ +R L + + A ++++EM + G + D T++ L +
Sbjct: 370 ILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVG-LRPDTFTYNPLMQGH 428
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
+ + A L E+ N ++ +Y +I Q G E + +
Sbjct: 429 FQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNA 488
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
Y +I ++ A + ++ D+ N +I + GR+E AEE +
Sbjct: 489 FMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQ 548
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
++RG P+ T+ Y + G+++ A L + +++G P+++T +
Sbjct: 549 VQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSG------LKPNADTYTDLLEG 602
Query: 420 FEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIR 453
+ + D + L+ + + D ++ +IR
Sbjct: 603 YFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIR 636
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 114/270 (42%), Gaps = 1/270 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY + + +CK + A+ + E+M+ + + + +N +++ ++G E+ +EM
Sbjct: 245 TYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEM 304
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ PD++TY M L + + A+ +++EM G + + + L +++ G
Sbjct: 305 VDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSG-LKPNIVVYGTLVDGFMKEGK 363
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+A LKE+ + + Y LI + G L ++ + + +Y
Sbjct: 364 TAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNP 423
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
++Q D GA + E + ++ +MI + G + A L E G
Sbjct: 424 LMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEG 483
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
PNA + + + G++ LA + LEK
Sbjct: 484 LKPNAFMYAPLIIGHSKEGNISLACEALEK 513
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 121/311 (38%), Gaps = 40/311 (12%)
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR---------------------- 221
M+ + I+PD YTY+ ++ A D A++V EEM+R
Sbjct: 234 MEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGA 293
Query: 222 ------------DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQF 269
D ++ D T+ L + + ++A+ L E+ ++ Y
Sbjct: 294 VEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGT 353
Query: 270 LITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGC 329
L+ + + G +E + I + + A I Y N+I+ L + L A K KE
Sbjct: 354 LVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVG 413
Query: 330 ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 389
D N ++ + ++ + A EL R G PN ++ I + +NG+ K A
Sbjct: 414 LRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAG 473
Query: 390 DCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFE 449
+ LE+ I G P++ + +E ++ A LE + KA + +
Sbjct: 474 NLLEEMISEG------LKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYN 527
Query: 450 PLIRTYAAAGR 460
LI+ + GR
Sbjct: 528 SLIKGLSTVGR 538
>gi|302768589|ref|XP_002967714.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
gi|300164452|gb|EFJ31061.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
Length = 384
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 112/256 (43%), Gaps = 1/256 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S N TY +L+ Y ++ + ++A L ++M + +N + +Y K G E +
Sbjct: 120 SPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMER 179
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
++ EM + PD TYN + A + A ++ EM G WT L+S
Sbjct: 180 LLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSAR 239
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
E + E A + + L+++ ++ Y +++LYG+ G +E ++W + A
Sbjct: 240 KEQSVAE-ATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCI 298
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
I+Y +I+ + A CF++ D ++ ++ AY K GR AE L
Sbjct: 299 IAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFE 358
Query: 360 ARRRGADPNAKTWEIF 375
+ G P+ T+ I
Sbjct: 359 MTKEGFVPDGITYGIL 374
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 160/392 (40%), Gaps = 14/392 (3%)
Query: 74 ALKLSENMEKRGMNKTVSDQA--IHLDLVAKVQGIDAAENYFVDLPETSK--NHLTYGSL 129
A L M K G TV IH L K + +D A + E+ K + + Y L
Sbjct: 1 ACSLFYRMMKDGCEATVVTYTVIIHGYLRQKSK-LDHALRLLEVMKESGKKPDEILYNCL 59
Query: 130 LNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
+N E AE +L+ MK + + + + +L+ YA TG + + QEMK
Sbjct: 60 VNGLVNSGRLEAAEKILDDMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGE 119
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
P+S+TYN ++ A + +EM G A D T++ ++Y + GL E E
Sbjct: 120 SPNSWTYNALIQGYGRKGLFKEALELYDEMDGVG-CAKDVHTYNIAIAMYGKRGLLEDME 178
Query: 250 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 309
R L E++ + D Y L+ +Y + + + I R + A +Y M+
Sbjct: 179 RLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSA 238
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
+ + A + F+ +S +I + M+ Y + G A +L + G P
Sbjct: 239 RKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCI 298
Query: 370 KTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 429
+ + Y +G + A+ C + +G VP ++ M + + A
Sbjct: 299 IAYSGLIESYGHHGMYQEALACFQDMRKSG------IVPDTKIYTALMDAYGKAGRCREA 352
Query: 430 E-GFLEILKKAVDDLGVEVFEPLIRTYAAAGR 460
E + E+ K+ G+ + L+R +A AGR
Sbjct: 353 ELLYFEMTKEGFVPDGI-TYGILVRAFANAGR 383
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 125/274 (45%), Gaps = 3/274 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N T ++N CK+ EK L +++E + + +N+L++ Y+ G E+ ++
Sbjct: 224 NVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELM 283
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M + P YTYN + L A+ V EM R G ++ D TT+ +L +
Sbjct: 284 HAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG-LSPDSTTYRSLLMEACK 342
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G + E ++ +R+ DL + +++L+ ++GNL + + S++ A N+
Sbjct: 343 KGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVI 402
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
Y +IQ + A E + GCA D+ N ++ K L A++L
Sbjct: 403 YTILIQGYCRKGMISEAMNLRNEMLQQGCAM-DVVTYNTILHGLCKRKMLGEADKLFNEM 461
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
RG P++ T I D + + G+++ A++ +K
Sbjct: 462 TERGLFPDSYTLTILIDGHCKLGNLQNAMELFKK 495
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 114/254 (44%), Gaps = 9/254 (3%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY ++L+ CK M +A+ L +M E L S L+ + K G+ + + ++
Sbjct: 436 VTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKK 495
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
MK I D TYN + V DI A+ + +M + +FS L + G
Sbjct: 496 MKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSK-EILPTPISFSILVNALCSKG 554
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS--EVYRIWRSLRLAF-PNTANI 300
+A R E+ +++ + +I Y ++GN S E++ + + + F P+ I
Sbjct: 555 HLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIF-LEKMISEGFVPDC--I 611
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWE--SGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
SY +I V +++ A K+ E G D+ N ++ + +E +++ AE +
Sbjct: 612 SYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLR 671
Query: 359 RARRRGADPNAKTW 372
+ RG +P+ T+
Sbjct: 672 KMIERGVNPDRSTY 685
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 104/215 (48%), Gaps = 3/215 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL--PETSKNHLTYGSLLN 131
A++L + M+++ + V LD KV ID A+ + D+ E +++ L+N
Sbjct: 489 AMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVN 548
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C + +A + ++M ++ + M NS++ Y ++G+ +++M + +P
Sbjct: 549 ALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVP 608
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMK-RDGRVAADWTTFSNLASIYVEAGLFEKAER 250
D +YN + ++S A ++++M+ + G + D T++++ + ++AE
Sbjct: 609 DCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEA 668
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 285
L+++ R + D S Y LI + NL+E +R
Sbjct: 669 VLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFR 703
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 50/253 (19%), Positives = 96/253 (37%), Gaps = 25/253 (9%)
Query: 207 NDISGAERVIEEMKRD-GRVAADWTTFSNLASIYVEAGLFEKAERALKELENR------- 258
ND+S +R ++++ + + S + I V +G A+ + + R
Sbjct: 80 NDLSLGQRFVDQLGFNFPNFKHTSLSLSAMIHILVRSGRLSDAQSCVLRMIRRSGVSRVE 139
Query: 259 ----------NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN-MIQ 307
N + S + LI + Q L E Y + LR + T +I N +I
Sbjct: 140 IVNSLVSTYSNCGSNDSVFDLLIRTFVQARKLREAYEAFTLLR-SKGYTVSIDACNALIG 198
Query: 308 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
LV + + A + ++E ++ N+M+ A K+G++E + +G P
Sbjct: 199 SLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYP 258
Query: 368 NAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVD 427
+ T+ Y G M+ A + + G G + I +H + E+
Sbjct: 259 DIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPG--VYTYNTVINGLCKHGKYER--- 313
Query: 428 GAEGFLEILKKAV 440
E F E+L+ +
Sbjct: 314 AKEVFAEMLRSGL 326
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGF--SSMPFNSLMTLYAKTGHPEKIPAII 181
++Y +L+ + KE KA L++KM+E G +NS++ + + ++ A++
Sbjct: 611 ISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVL 670
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
++M + PD TY + + ++++ A R +EM + G
Sbjct: 671 RKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRG 712
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 157/370 (42%), Gaps = 13/370 (3%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK----NHLTYGSL 129
A+K+ ME R V + L + K +D A + F + TSK N +TY +L
Sbjct: 208 AMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRM--TSKGCVPNVVTYTTL 265
Query: 130 LNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
++ C + A L+++M ++ +N+L+ Y + G E+ + +EM A S
Sbjct: 266 IHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSC 325
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
+PD TY +R + + A ++E MK + D T+S + + Y A F +A
Sbjct: 326 LPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAA 385
Query: 250 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 309
++E+ RN + Y LI + G ++ + +++ P+ ++Y +I+ L
Sbjct: 386 EFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK--PDV--VTYTIVIEGL 441
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
A +E + + N +IGA + G ++ A +L G +P
Sbjct: 442 CGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGM 501
Query: 370 KTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR--GDGGKWVPSSETIRTFMRHFEQEKDVD 427
T+ + + R G M++A + E + VP + +R + +++D
Sbjct: 502 VTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVP-EQAFSALIRGLCKAREID 560
Query: 428 GAEGFLEILK 437
A +E L+
Sbjct: 561 KAMAVVEELR 570
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 148/346 (42%), Gaps = 11/346 (3%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY S+++ C++ ++A ++ +MK + F++L+T + ++ + +E
Sbjct: 82 VTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKE 141
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIE--EMKRDGRVAADWTTFSNLASIYVE 241
+ SS D+ + + + L I A + + EM+ DG D T++ L + +
Sbjct: 142 ILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCK 201
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTAN 299
+G EKA + L +E R ++ Y L+ + G+L + ++R + + PN
Sbjct: 202 SGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNV-- 259
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
++Y +I L + A E + C D N ++ Y + GR+E A++L +
Sbjct: 260 VTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKE 319
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
+ P+ T+ + ++ A LE + T G V S + + R
Sbjct: 320 MAAKSCLPDRITYTCLVRGFCNASRLEEARFLLEN-MKTAAGIDPDVVTYSIVVAGYSR- 377
Query: 420 FEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVM 465
++ V+ AE E++ + V V + LI AGR + M
Sbjct: 378 --AKRFVEAAEFIQEMIARNVAPNAV-TYSSLIDGLCKAGRVNHAM 420
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 112/247 (45%), Gaps = 14/247 (5%)
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGR-VAADWTTFSNLASIYVEAGLFEK 247
+ P+ TYNV + L S A V++EM RDG+ VA D T+S + + + + G ++
Sbjct: 5 VAPNERTYNVVVNGLCKARLTSKAYEVLKEM-RDGKSVAPDLVTYSTVINGFCKQGEMDR 63
Query: 248 AERALKELENRNAHR-DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI 306
A L+E+ R+ D+ Y ++ + G + + R ++L ++ +I
Sbjct: 64 ACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALI 123
Query: 307 QVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR--G 364
N + + A K +KE + D ++ +I +E R+ A EL + R G
Sbjct: 124 TGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDG 183
Query: 365 A-DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT-GRGDGGKWVPSSETIRTFMRHFEQ 422
A P+ T+ D + ++G+ LEKA+ G +G K VP+ T + + +
Sbjct: 184 AWKPDVVTYTALIDGFCKSGN-------LEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCK 236
Query: 423 EKDVDGA 429
D+D A
Sbjct: 237 AGDLDQA 243
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 130/347 (37%), Gaps = 47/347 (13%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMP----FNSLMTLYAKTGHP 174
+ N TY ++N CK +T KA +L++M++ G S P +++++ + K G
Sbjct: 5 VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRD---GKSVAPDLVTYSTVINGFCKQGEM 61
Query: 175 EKIPAIIQEMKASSIM-PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFS 233
++ I++EM M PD TY + L + A ++ EMK G V D TFS
Sbjct: 62 DRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKG-VEPDKFTFS 120
Query: 234 NLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 293
L + + A ++A + KE+ + D + LIT + + E Y +++ + +
Sbjct: 121 ALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEM- 179
Query: 294 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
E G D+ +I + K G LE A
Sbjct: 180 -------------------------------REDGAWKPDVVTYTALIDGFCKSGNLEKA 208
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETI 413
++ R PN T+ + GD+ A+D + G VP+ T
Sbjct: 209 MKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKG------CVPNVVTY 262
Query: 414 RTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 460
T + VD A ++ + + L+ Y GR
Sbjct: 263 TTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGR 309
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 108/270 (40%), Gaps = 35/270 (12%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +L++ +CK EKA +L M+ + + ++SL+ K G ++ + +
Sbjct: 190 VTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRR 249
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + +P+ TY + L A + + A +++EM AD +++ L Y G
Sbjct: 250 MTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATC-CPADTVSYNALLDGYCRLG 308
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
E+A++ KE+ ++ D Y L+ + L E +
Sbjct: 309 RIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFL----------------- 351
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
L N+K G + D+ ++++ Y++ R A E + R
Sbjct: 352 -----LENMKTAAGIDP------------DVVTYSIVVAGYSRAKRFVEAAEFIQEMIAR 394
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
PNA T+ D + G + A++ L+
Sbjct: 395 NVAPNAVTYSSLIDGLCKAGRVNHAMEVLK 424
>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 132/313 (42%), Gaps = 3/313 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAA--ENYFVDLPETSKNHLTYGSLLN 131
A K+ + + KR + TV ++ KV +D + ++ T + TY +L+N
Sbjct: 259 AQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALIN 318
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CKE + A L +M E L + + F +L+ +++ G + + Q+M + + P
Sbjct: 319 ALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQP 378
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D YN + D+ A +++ M R G + D T++ L + G + A
Sbjct: 379 DIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG-LRPDKVTYTTLIDGFCRGGDVDTALEI 437
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
KE++ D + LI + G + + R R + A +++Y M+
Sbjct: 438 RKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCK 497
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
D K KE +S ++ NV++ K G+++NA+ L + G P+ T
Sbjct: 498 KGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKNADMLLDAMLNVGVVPDDIT 557
Query: 372 WEIFSDYYLRNGD 384
+ + + R+ +
Sbjct: 558 YNTLLEGHHRHAN 570
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 120/279 (43%), Gaps = 1/279 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N + L+N +CKE A+ + +++ + +L + + FN+L+ Y K G+ + +
Sbjct: 239 NVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLK 298
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M+ S PD +TY+ + AL N + GA R+ EM G + D F+ L +
Sbjct: 299 HHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPND-VIFTTLIHGHSR 357
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G + + + +++ ++ D+ Y L+ + + G+L I + ++
Sbjct: 358 NGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVT 417
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I D+ A + KE + D + +I KEGR+ +AE
Sbjct: 418 YTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREML 477
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 400
R G P+ T+ + D + + GD + L++ G
Sbjct: 478 RAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGH 516
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 75/162 (46%), Gaps = 1/162 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +L++ +C+ + A + ++M + + + F++L+ K G ++E
Sbjct: 416 VTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALRE 475
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + + PD TY + M A D ++++EM+ DG + + T++ L + + G
Sbjct: 476 MLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHI-PNVVTYNVLLNGLCKLG 534
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 285
+ A+ L + N D Y L+ + + N S+ Y+
Sbjct: 535 QMKNADMLLDAMLNVGVVPDDITYNTLLEGHHRHANASKHYK 576
>gi|224124604|ref|XP_002319373.1| predicted protein [Populus trichocarpa]
gi|222857749|gb|EEE95296.1| predicted protein [Populus trichocarpa]
Length = 810
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 125/282 (44%), Gaps = 2/282 (0%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
T + +TY SL+ + + ++A LL++M+E + F+++M YA+ G
Sbjct: 373 TWPDEVTYNSLIQMFSGGDLMDQARDLLDEMQEAGFKPQCLTFSAVMACYARLGQLSDAV 432
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+ QEM + + P+ Y + A V ++ A + M+ G + A+ ++L +
Sbjct: 433 DVYQEMVKAGVKPNEVVYGSLINGFAEVGNVEEALKYFRMMEESG-IPANQIVLTSLIKV 491
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
Y + G F+ A+ K++++ D+ A +I+LY G +SE ++++LR
Sbjct: 492 YSKLGCFDGAKHLYKKMKDLEGGPDIIASNSMISLYADLGMISEAELVFKNLR-ENGQAD 550
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+S+ M+ + ++ L A +E + D N ++ YA G+L EL
Sbjct: 551 GVSFATMMYLYKSMGMLDEAIDIAEEMKQSGLLRDCVSYNKVMACYATNGQLRECAELLH 610
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 400
+ P+ T++I + G + LE A G+
Sbjct: 611 EMIGQKLLPDGGTFKILFTVLKKGGFPSEGIAQLESAYLEGK 652
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/367 (20%), Positives = 155/367 (42%), Gaps = 13/367 (3%)
Query: 97 LDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLL-NCYCKELMTEKAEALLEKMKELN 153
+DL K + A F ++ ++ + + +T+ +++ C L++E AE+LL+KM+E
Sbjct: 139 IDLYGKAGRLKDAAEVFSEMLKSGVAMDTITFNTMIFTCGSHGLLSE-AESLLDKMEERR 197
Query: 154 LGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAE 213
+ + +N ++LYA G+ +++ ++PD ++ + L N + E
Sbjct: 198 ISPDTRTYNIFLSLYADAGNINAALECYWKIRNVGLVPDIVSHRTILHILCGRNMVREVE 257
Query: 214 RVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITL 273
VIEEMK+ + D + + +Y+ GL ++A L + + + +I
Sbjct: 258 AVIEEMKKSSQ-KIDVHSVPGIIKMYINEGLHDRANNLLDKCQ-FDVGFSSKVRAAIIDA 315
Query: 274 YGQTGNLSEVYRIWRSLR-LAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY 332
Y + G +E ++ R L P + Y M++ K A FK +
Sbjct: 316 YAERGLWAEAEAVFYGKRDLLGPEKGVLEYNVMVKAYGKAKLYDKAFSLFKGMRNHGTWP 375
Query: 333 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 392
D N +I ++ ++ A +L + + G P T+ Y R G + AVD
Sbjct: 376 DEVTYNSLIQMFSGGDLMDQARDLLDEMQEAGFKPQCLTFSAVMACYARLGQLSDAVDVY 435
Query: 393 EKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLI 452
++ + G P+ + + F + +V+ A + +++++ V LI
Sbjct: 436 QEMVKAGVK------PNEVVYGSLINGFAEVGNVEEALKYFRMMEESGIPANQIVLTSLI 489
Query: 453 RTYAAAG 459
+ Y+ G
Sbjct: 490 KVYSKLG 496
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 113/301 (37%), Gaps = 29/301 (9%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
+ L+ +YAK G E + I+ M+ + PD T N ++ L V + AER ++
Sbjct: 13 YGMLVDVYAKAGLVEAL-LWIKHMRLRGLFPDEVTMNTVVKVLKDVGEFDKAERFYKDWC 71
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD--LSAYQFLITLYGQTG 278
GRV D ++ L++ N R +S FL+T +TG
Sbjct: 72 A-GRVELDGLELDSM-------------------LDSENGSRSEPVSFKHFLLTELFKTG 111
Query: 279 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 338
++ L +Y +I + L A + F E D N
Sbjct: 112 GRVKIGGSSDEETLVRKPCLTSTYNTLIDLYGKAGRLKDAAEVFSEMLKSGVAMDTITFN 171
Query: 339 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 398
MI G L AE L ++ R P+ +T+ IF Y G++ A++C K +
Sbjct: 172 TMIFTCGSHGLLSEAESLLDKMEERRISPDTRTYNIFLSLYADAGNINAALECYWKIRNV 231
Query: 399 GRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAA 458
G VP + RT + V E +E +KK+ + V +I+ Y
Sbjct: 232 G------LVPDIVSHRTILHILCGRNMVREVEAVIEEMKKSSQKIDVHSVPGIIKMYINE 285
Query: 459 G 459
G
Sbjct: 286 G 286
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/266 (19%), Positives = 108/266 (40%), Gaps = 4/266 (1%)
Query: 97 LDLVAKVQGIDAAENYFVDLPETSK-NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLG 155
+ L A + I AE F +L E + + +++ +++ Y M ++A + E+MK+ L
Sbjct: 524 ISLYADLGMISEAELVFKNLRENGQADGVSFATMMYLYKSMGMLDEAIDIAEEMKQSGLL 583
Query: 156 FSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERV 215
+ +N +M YA G + ++ EM ++PD T+ + L S
Sbjct: 584 RDCVSYNKVMACYATNGQLRECAELLHEMIGQKLLPDGGTFKILFTVLKKGGFPSEGIAQ 643
Query: 216 IEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYG 275
+E +G+ A + SI+ GL A + + D AY I YG
Sbjct: 644 LESAYLEGKPYARQAV---ITSIFSVVGLHALALESCESFTKAEVALDSFAYNVAIYAYG 700
Query: 276 QTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 335
+G + + + + + ++ +N++ + G ++ + + + G +
Sbjct: 701 SSGEIDKALKTFMKRQDEGLEPDLVTSINLVHCYGKAGMVEGVKRIYSQLKYGEIKPNDS 760
Query: 336 VTNVMIGAYAKEGRLENAEELKERAR 361
+ ++ AY R + AE + + R
Sbjct: 761 LVKAVVDAYKNANRHDLAELVNQDIR 786
>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g09680
gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 607
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 130/296 (43%), Gaps = 7/296 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N + L+N +CKE A+ + +++ + +L + + FN+L+ Y K G+ ++ +
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+M+ S PD +TY+ + AL N + GA + +EM + G + D F+ L +
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPND-VIFTTLIHGHSR 357
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G + + + +++ ++ D+ Y L+ + + G+L I + I+
Sbjct: 358 NGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKIT 417
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I D+ A + KE + D + ++ KEGR+ +AE
Sbjct: 418 YTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREML 477
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 417
R G P+ T+ + D + + GD + L++ + DG VPS T +
Sbjct: 478 RAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEM----QSDG--HVPSVVTYNVLL 527
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 132/313 (42%), Gaps = 3/313 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAA--ENYFVDLPETSKNHLTYGSLLN 131
A K+ + + KR + TV ++ KV +D + ++ T + TY +L+N
Sbjct: 259 AQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALIN 318
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CKE + A L ++M + L + + F +L+ +++ G + + Q+M + + P
Sbjct: 319 ALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQP 378
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D YN + D+ A +++ M R G + D T++ L + G E A
Sbjct: 379 DIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG-LRPDKITYTTLIDGFCRGGDVETALEI 437
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
KE++ D + L+ + G + + R R + A +++Y M+
Sbjct: 438 RKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCK 497
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
D K KE +S + NV++ K G+++NA+ L + G P+ T
Sbjct: 498 KGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDIT 557
Query: 372 WEIFSDYYLRNGD 384
+ + + R+ +
Sbjct: 558 YNTLLEGHHRHAN 570
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 74/161 (45%), Gaps = 1/161 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +L++ +C+ E A + ++M + + + F++L+ K G ++E
Sbjct: 416 ITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALRE 475
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + I PD TY + M A D ++++EM+ DG V + T++ L + + G
Sbjct: 476 MLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPS-VVTYNVLLNGLCKLG 534
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVY 284
+ A+ L + N D Y L+ + + N S+ Y
Sbjct: 535 QMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRY 575
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 3/211 (1%)
Query: 101 AKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSS 158
+KV + AE F++L + S + ++++ Y K M K E +L MKE + S+
Sbjct: 569 SKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSA 628
Query: 159 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 218
+NSLM +Y++ G EK I+ E+K+S + PD Y+YN + A + A R+ E
Sbjct: 629 ATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSE 688
Query: 219 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 278
MK G + D T++ YV +FE+A ++ + + + Y ++ Y + G
Sbjct: 689 MKCSG-LKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNG 747
Query: 279 NLSEVYRIWRSLRLAFPNTANISYLNMIQVL 309
L++ +L P + N+ +VL
Sbjct: 748 KLTDAKIFVSNLPQLHPGYSKQEQQNLFEVL 778
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 116/251 (46%), Gaps = 1/251 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ +T+ SLL+ Y K ++A ++++M+ + S + +NSL++ Y K G E+ A+
Sbjct: 277 DKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALK 336
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
QEM+ I PD TY + L I A +EM R+G + T++ L ++
Sbjct: 337 QEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNG-CKPNLCTYNALIKMHGV 395
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G F + EL + D+ + L+ ++GQ G SEV +++ ++ A +
Sbjct: 396 RGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDT 455
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y+++I A + +K D+ N ++ A A+ GR E AE+L
Sbjct: 456 YVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEME 515
Query: 362 RRGADPNAKTW 372
R P+ ++
Sbjct: 516 ERDCKPDEYSY 526
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 125/275 (45%), Gaps = 1/275 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY SL++ Y + + + A + ++M E + +N++++ A+ G E+ + EM
Sbjct: 455 TYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEM 514
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ PD Y+Y+ + A A + + + +++ + +W L + +
Sbjct: 515 EERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLV-KTLVLVNSKVNN 573
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+AE+A EL + D++ ++++YG+ + +V +I ++ + N + +Y +
Sbjct: 574 LAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNS 633
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
++ + L D E E +S D N +I AY ++G+++ A L + G
Sbjct: 634 LMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSG 693
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
P+ T+ IF Y+ N + A++ + + G
Sbjct: 694 LKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQG 728
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 119/273 (43%), Gaps = 4/273 (1%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY ++L+ + E+AE L +M+E + ++SL+ YA +K+ A+ ++
Sbjct: 490 TYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDI 549
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ I P ++ + + VN+++ AE+ E+ R R + D + + SIY + +
Sbjct: 550 YSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLEL-RQKRCSLDINVLNAMVSIYGKNRM 608
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
K E+ L ++ + + Y L+ +Y + G+ + I ++ + SY
Sbjct: 609 VRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNT 668
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+I + A + F E + D+ N+ + +Y E A EL +G
Sbjct: 669 VIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQG 728
Query: 365 ADPNAKTWEIFSDYYLRNG---DMKLAVDCLEK 394
PN +T+ + Y RNG D K+ V L +
Sbjct: 729 CKPNERTYNSIVEGYCRNGKLTDAKIFVSNLPQ 761
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 99/251 (39%), Gaps = 43/251 (17%)
Query: 141 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 200
+A ALL+ + G + +L++ +++ G A+ + M S + P TYNV +
Sbjct: 159 EASALLDAAPGPDAG----AYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVL 214
Query: 201 RALAAVNDISGAERV--IEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
+ + + E V + MK G VA D T++ L S L+++A + E++
Sbjct: 215 HVYSKMA-VPWKEVVELVASMKEHG-VAPDRYTYNTLISCCRRRALYKEAAQVFDEMKAS 272
Query: 259 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 318
D + L+ +YG+ E I+V+ ++ +
Sbjct: 273 GFEPDKVTFNSLLDVYGKARRHDEA----------------------IEVIQEMERV--- 307
Query: 319 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 378
GC + N +I +Y K+G LE A LK+ +G P+ T+
Sbjct: 308 ---------GCPP-SVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISG 357
Query: 379 YLRNGDMKLAV 389
R G + A+
Sbjct: 358 LDRAGKIDAAI 368
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 154/371 (41%), Gaps = 12/371 (3%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
A++L M KRG V ++ + K A + F + + N +TY ++++
Sbjct: 182 AVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIID 241
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK+ + A L +M E + + +NS++ + G + + +EM +MP
Sbjct: 242 SLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMP 301
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
++ T+ + + L +S A V E M G V D +T++ L Y L +A++
Sbjct: 302 NTVTFTILVDGLCKEGMVSEARLVFETMTEKG-VEPDISTYNALMDGYCLQRLMNEAKKV 360
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
+ + + +Y LI Y ++ + E + + N ++Y ++Q L
Sbjct: 361 FEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQ 420
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
L A FKE S ++ +++ + K G L+ A +L + + + +PN
Sbjct: 421 LGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVH 480
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG 431
+ I + G +++A + K GDG + P T ++ +E D A
Sbjct: 481 YTILIEGMFIAGKLEVAKELFSKLF----GDGTR--PDIRTYTVMIKGLLKEGLSDEA-- 532
Query: 432 FLEILKKAVDD 442
++ +K DD
Sbjct: 533 -YDLFRKMEDD 542
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 120/275 (43%), Gaps = 1/275 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +T+ L++ CKE M +A + E M E + +N+LM Y + +
Sbjct: 302 NTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVF 361
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+ M P +++YN+ + + A+ ++ EM + D T+S L +
Sbjct: 362 EIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKA-LNPDTVTYSTLMQGLCQ 420
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G ++A KE+ + H +L Y L+ + + G+L E ++ +S++ +
Sbjct: 421 LGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVH 480
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I+ + L A++ F + DIR VMI KEG + A +L +
Sbjct: 481 YTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKME 540
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 396
G PN+ ++ + +L+N D A+ +++ +
Sbjct: 541 DDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMV 575
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 119/274 (43%), Gaps = 5/274 (1%)
Query: 114 VDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGH 173
+DL + N + L+NC C+ + + ++L KM +L + ++ FN+L+ G
Sbjct: 119 MDLFRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGK 178
Query: 174 PEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFS 233
++ + EM P+ +Y + L + S A V ++M+++G + T+S
Sbjct: 179 IKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNG-CKPNVVTYS 237
Query: 234 NLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--R 291
+ + L A L E+ R ++ Y ++ + G L+E R+++ + R
Sbjct: 238 TIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGR 297
Query: 292 LAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLE 351
PNT +++ ++ L + A F+ DI N ++ Y + +
Sbjct: 298 DVMPNT--VTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMN 355
Query: 352 NAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 385
A+++ E R+G P A ++ I + Y ++ M
Sbjct: 356 EAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRM 389
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/338 (18%), Positives = 128/338 (37%), Gaps = 13/338 (3%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
+G L + K+ +L +M + + N L+ + H + +++ +M
Sbjct: 96 FGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMF 155
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
I PD+ T+N + L I A + EM + G + +++ + + + G
Sbjct: 156 KLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGH-EPNVISYTTVINGLCKTGNT 214
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYL 303
A K++E ++ Y +I + +++ + R PN +Y
Sbjct: 215 SMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNV--FTYN 272
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+++ NL L A + FKE + +++ KEG + A + E +
Sbjct: 273 SIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEK 332
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQE 423
G +P+ T+ D Y M A E I G P + + + + +
Sbjct: 333 GVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKG------CAPGAHSYNILINGYCKS 386
Query: 424 KDVDGAEGFL-EILKKAVDDLGVEVFEPLIRTYAAAGR 460
+ +D A+ L E+ KA++ V + L++ GR
Sbjct: 387 RRMDEAKSLLAEMYHKALNPDTV-TYSTLMQGLCQLGR 423
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 73/164 (44%), Gaps = 1/164 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY LL+ +CK ++A LL+ MKE L + + + L+ G E +
Sbjct: 442 NLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELF 501
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
++ PD TY V ++ L A + +M+ DG + + +++ + +++
Sbjct: 502 SKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFL-PNSCSYNVMIQGFLQ 560
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 285
A R + E+ + +LS +Q L+ L Q +S+ R
Sbjct: 561 NQDSSTAIRLIDEMVGKRFSVNLSTFQMLLDLESQDEIISQFMR 604
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 144/339 (42%), Gaps = 18/339 (5%)
Query: 110 ENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTL 167
E F ++ E + N +T+ L+ +C+ M E+A +LE+M ++ N ++
Sbjct: 270 EELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINT 329
Query: 168 YAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAA 227
K G + + M + PD+ +Y ++ L A+ +++EM R
Sbjct: 330 ICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN-CPP 388
Query: 228 DWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW 287
+ TF+ I + GL E+A ++++ ++ Y L+ + G + ++
Sbjct: 389 NEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF 448
Query: 288 RSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAK 346
S+ PNT I+Y ++ L N + L A + E + CA ++ NV++ + +
Sbjct: 449 YSMPCK-PNT--ITYTTLLTGLCNAERLDAAAELLAEMLQKDCAP-NVVTFNVLVSFFCQ 504
Query: 347 EGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKW 406
+G ++ A EL E+ G PN T+ D ++ + + A++ L + G
Sbjct: 505 KGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVS----- 559
Query: 407 VPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGV 445
P T + + +E V+ A I V DLG+
Sbjct: 560 -PDIVTYSSIIGVLSREDRVEEAIKMFHI----VQDLGM 593
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 89/432 (20%), Positives = 169/432 (39%), Gaps = 52/432 (12%)
Query: 62 LKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL--PET 119
++ L DR AL L ++M RG +V + L+ V K G A ++
Sbjct: 152 IRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGC 211
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
+ N +TY ++N C+E + A L ++ ++ + +++ E +
Sbjct: 212 TPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEE 271
Query: 180 IIQEMKASSIMPDSYTYNVWM----------RALAAVNDISG---------AERVIEEMK 220
+ EM + MP+ T+++ + RA+ + +SG VI +
Sbjct: 272 LFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTIC 331
Query: 221 RDGRVAADWTTFSNLAS----------IYVEAGL-----FEKAERALKELENRNAHRDLS 265
+ GRV + +N+ S V GL +E A+ LKE+ +N +
Sbjct: 332 KQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEV 391
Query: 266 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 325
+ I + Q G + + + + ++Y ++ + A + F +
Sbjct: 392 TFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF--Y 449
Query: 326 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 385
C I T ++ G E RL+ A EL ++ PN T+ + ++ + G M
Sbjct: 450 SMPCKPNTITYTTLLTGLCNAE-RLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLM 508
Query: 386 KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGV 445
A++ +E+ ++ G P+ T T + KD + E LE+L V + GV
Sbjct: 509 DEAIELVEQMMEHG------CTPNLITYNTLLDGI--TKDCNSEEA-LELLHGLVSN-GV 558
Query: 446 EVFEPLIRTYAA 457
P I TY++
Sbjct: 559 ---SPDIVTYSS 567
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/303 (18%), Positives = 123/303 (40%), Gaps = 10/303 (3%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A+++ E M G + I ++ + K +D A + ++ S + ++Y ++L
Sbjct: 304 AIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLK 363
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C+ E A+ LL++M N + + FN+ + + + G E+ +I++M
Sbjct: 364 GLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEV 423
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ TYN + + A + M + T++ L + A + A
Sbjct: 424 NIVTYNALVNGFCVQGRVDSALELFYSMP----CKPNTITYTTLLTGLCNAERLDAAAEL 479
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVL 309
L E+ ++ ++ + L++ + Q G + E + + PN I+Y ++ +
Sbjct: 480 LAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNL--ITYNTLLDGI 537
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
+ A + S + DI + +IG ++E R+E A ++ + G P A
Sbjct: 538 TKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKA 597
Query: 370 KTW 372
+
Sbjct: 598 VIY 600
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/296 (19%), Positives = 116/296 (39%), Gaps = 6/296 (2%)
Query: 106 IDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLM 165
+DAA +P + + TY ++ C +A +LL+ M S + + L+
Sbjct: 129 LDAARRLIASMP-VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLL 187
Query: 166 TLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRV 225
K+ + ++ EM+A P+ TYNV + + + A + + G
Sbjct: 188 EAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYG-F 246
Query: 226 AADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 285
D +++ + A +E E E+ +N + + L+ + + G + +
Sbjct: 247 QPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQ 306
Query: 286 IWRSLRLAFPNTANISYLNM-IQVLVNLKDLPGAEKCFKEWES-GCATYDIRVTNVMIGA 343
+ + AN + N+ I + + A + S GC+ I T V+ G
Sbjct: 307 VLEQMS-GHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGL 365
Query: 344 YAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
E R E+A+EL + R+ PN T+ F + G ++ A +E+ + G
Sbjct: 366 CRAE-RWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHG 420
>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 989
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 137/304 (45%), Gaps = 4/304 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLN 131
A L M RG++ + +D + KV AE F + + + N +TY +LL+
Sbjct: 410 AFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLD 469
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
YCK E AE +L+KM++ ++ + + F+S++ YAK G K +++EM ++MP
Sbjct: 470 GYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMP 529
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
++ Y + + + A+ +EMK R+ F L + G ++A
Sbjct: 530 NTIVYAILIDGYFKAGEQDVADDFCKEMKSR-RLEESNVIFDILLNNLKRVGRMDEARSL 588
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
+ ++ ++ D+ Y LI Y + GN I + ++ ++Y +I+ L+
Sbjct: 589 IIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLR 648
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
L C + E G A D N +I Y +G+ E+A ++ + G PNA T
Sbjct: 649 LGKYDPRYVCSRMIELGLAP-DCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVT 707
Query: 372 WEIF 375
+ I
Sbjct: 708 YNIL 711
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 114/293 (38%), Gaps = 76/293 (25%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGH---------- 173
+TY +++N YC + TE A +L +MK + +++ +N L+ KTG
Sbjct: 671 ITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPITHKFL 730
Query: 174 ----------------PEKIPA----------IIQEMKASSIMPDSYTYNVWMRALAAVN 207
EK+ A ++ EM I D TYN +R +
Sbjct: 731 VKAYSRSEKADKILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTYNALIRGYCTGS 790
Query: 208 DISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE----RALKELENRNAHRD 263
+ A + +M DG +A + TT++ L AGL E+ + + E+ R +
Sbjct: 791 HVEKALKTYSQMFVDG-IAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPN 849
Query: 264 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 323
+ Y L++ YG+ GN + I ++ MI K
Sbjct: 850 AATYDILVSGYGRVGNRKKTI---------------ILHIEMIT---------------K 879
Query: 324 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 376
+ TY NV+I YAK G++ A EL +G PN+ T++I +
Sbjct: 880 GFVPTLKTY-----NVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILT 927
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/273 (19%), Positives = 110/273 (40%), Gaps = 36/273 (13%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
NH++Y +++N K +A L +M + F + ++M K G ++ +
Sbjct: 390 NHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVF 449
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+ + ++ P+ TY+ + + + AE V+++M+++ V + TFS++ + Y +
Sbjct: 450 ETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKE-HVPPNVITFSSIINGYAK 508
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G+ KA L+E+ RN + Y LI Y + G
Sbjct: 509 KGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQ--------------------- 547
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
++ D E + E +DI + N+ + GR++ A L
Sbjct: 548 ---------DVADDFCKEMKSRRLEESNVIFDILLNNL-----KRVGRMDEARSLIIDMY 593
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
+G DP+ + D Y + G+ A+ +++
Sbjct: 594 SKGIDPDIVNYASLIDGYFKEGNQLAALSIVQE 626
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 106/267 (39%), Gaps = 36/267 (13%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +L+ YCK + E++ +L +KM + + +S++ + + G + + +E
Sbjct: 322 VTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFRE 381
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + P+ +Y +N + + RV+E ++ +F + V G
Sbjct: 382 MYEMGLDPNHVSYA------TIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDG 435
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
LF+ G+T EV+ L LA PN ++Y
Sbjct: 436 LFK---------------------------VGKTKEAEEVFETILKLNLA-PNC--VTYS 465
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
++ L + AE ++ E ++ + +I YAK+G L A ++ +R
Sbjct: 466 ALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQR 525
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVD 390
PN + I D Y + G+ +A D
Sbjct: 526 NVMPNTIVYAILIDGYFKAGEQDVADD 552
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/349 (20%), Positives = 128/349 (36%), Gaps = 55/349 (15%)
Query: 100 VAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSM 159
+ KV +D A Y + +++TY +++ +C++ + ++ LL +M + L F S+
Sbjct: 139 LCKVGDLDLALGYLRNNDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSI 198
Query: 160 PFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM 219
N L+ Y + G + ++ + + D N + +S A +IE
Sbjct: 199 TCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAVLMSQATELIENS 258
Query: 220 KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL-------------------ENRNA 260
R V D T++ L + + G +AE E+ E +N
Sbjct: 259 WRSD-VKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNL 317
Query: 261 HRDLSAYQFLI---------------------------------TLYG--QTGNLSEVYR 285
L Y LI LYG + G L+E
Sbjct: 318 QPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAV 377
Query: 286 IWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 345
++R + + ++SY +I L + A + ++DI ++
Sbjct: 378 LFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLF 437
Query: 346 KEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
K G+ + AEE+ E + PN T+ D Y + G M+LA L+K
Sbjct: 438 KVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQK 486
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 122/327 (37%), Gaps = 69/327 (21%)
Query: 66 RDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLT 125
R R+ +YP + +T S Q IH D + +P T K HL
Sbjct: 25 RLRRFFYPT----------PITRTFSSQ-IHKDSIF--------------IPPT-KTHLY 58
Query: 126 ---YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPF-NSLMTLYAKTGHPEKIPAII 181
+ +L+ Y A A M+ L L ++PF N+L+ + +G ++ +
Sbjct: 59 VSFFCTLIRLYLTHDRFSTASATFSHMRALGL-VPTLPFWNTLLYQFNASGLVSQVKLMY 117
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+M ++PD ++ NV + +L V D+ A + ++ + V D T++ + + +
Sbjct: 118 SDMLFCGVVPDVFSVNVLVHSLCKVGDLDLA---LGYLRNNDVVDIDNVTYNTVIWGFCQ 174
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
GL ++ L E+ R D L+ Y + G + Y W
Sbjct: 175 KGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQ--YAEW-------------- 218
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
V+ NL D G T D+ N +I Y + + A EL E +
Sbjct: 219 ------VMYNLVD-------------GGVTKDVIGLNTLIDGYCEAVLMSQATELIENSW 259
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLA 388
R + T+ + + GD+ A
Sbjct: 260 RSDVKIDIVTYNTLLKAFCKTGDLTRA 286
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/302 (16%), Positives = 123/302 (40%), Gaps = 30/302 (9%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
+K+ + +L++ YC+ ++ +A L+E ++ + +N+L+ + KTG +
Sbjct: 228 VTKDVIGLNTLIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAE 287
Query: 179 AIIQEM-------------------KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM 219
++ E+ + ++ P TY + A + + + ++M
Sbjct: 288 SLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKM 347
Query: 220 KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGN 279
+G + D T S++ + G +A +E+ + +Y +I ++G
Sbjct: 348 IMNG-IMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGR 406
Query: 280 LSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK-----EWESGCATYDI 334
+ E + + + + + ++ ++ L + AE+ F+ C TY
Sbjct: 407 VMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTY-- 464
Query: 335 RVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
+ ++ Y K G++E AE + ++ + PN T+ + Y + G + AVD L +
Sbjct: 465 ---SALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLRE 521
Query: 395 AI 396
+
Sbjct: 522 MV 523
>gi|452825793|gb|EME32788.1| mitochondrial protein translocase, MPT family [Galdieria
sulphuraria]
Length = 821
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 119/255 (46%), Gaps = 2/255 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +L++ + K + E+A L ++MKE N+ ++ ++SL++ + + G+ E+ AI +E
Sbjct: 424 VTYATLIDAFSKRMEPERALKLFQEMKEANVKPNNYCYSSLISAFCRAGYVERALAIFEE 483
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M I+PD + +N + + + A + + M R ++ D TF+ L S +A
Sbjct: 484 MTHERIVPDVFAFNALIDGFGKLRQVDKAFEIYDRM-RKLQIQPDRITFNALISASGKAK 542
Query: 244 LFEKAERALKEL-ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY 302
+A A+ ++ E D +Y LI G++G+ ++ Y ++ +R +++
Sbjct: 543 NSIRALEAMGDMTEIYGLTPDRHSYNALIDACGKSGDFTKAYEVFEEMRTKGIRPCTVTF 602
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+I DL + K D N +I A + L A E+ E+ ++
Sbjct: 603 NALIYGASRSHDLAASFKIVDLMLQEGLNPDAYTMNTLISACNRRQDLSTAFEVLEKFKQ 662
Query: 363 RGADPNAKTWEIFSD 377
G P+ T+ F D
Sbjct: 663 LGVHPDNVTFNTFID 677
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 1/104 (0%)
Query: 145 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 204
+LEK K+L + ++ FN+ + K EK+ ++ EM++ I P T N +
Sbjct: 656 VLEKFKQLGVHPDNVTFNTFIDAVGKLDSSEKMFELLSEMESRGISPSKVTLNTIVGCCG 715
Query: 205 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
I ER M + R+ D TFS L YV L +KA
Sbjct: 716 RRGKIDLMERGF-HMFHEKRLEPDSVTFSLLIENYVSHHLLDKA 758
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 38/194 (19%), Positives = 76/194 (39%), Gaps = 5/194 (2%)
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV--- 240
M+ I P+ YTY+ + L A M R +A + T++ + I
Sbjct: 338 MREEHIQPNIYTYSALIETLGKGGLCVRALSQFRRMSRIDNIAPNTVTYNAVIKIVSRCK 397
Query: 241 --EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
+ G +A L+E+ + D+ Y LI + + ++++ ++ A
Sbjct: 398 RNDCGGITRAMSLLREMATKGCIPDVVTYATLIDAFSKRMEPERALKLFQEMKEANVKPN 457
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
N Y ++I + A F+E D+ N +I + K +++ A E+ +
Sbjct: 458 NYCYSSLISAFCRAGYVERALAIFEEMTHERIVPDVFAFNALIDGFGKLRQVDKAFEIYD 517
Query: 359 RARRRGADPNAKTW 372
R R+ P+ T+
Sbjct: 518 RMRKLQIQPDRITF 531
>gi|326514834|dbj|BAJ99778.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 609
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 148/358 (41%), Gaps = 44/358 (12%)
Query: 73 PALKLSENMEKRGMN---KTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK-NHLTYGS 128
PAL L+E M KRG+ TV+ + L +V+G A V E + + + + +
Sbjct: 149 PAL-LAE-MCKRGVPFDAVTVNTALVALCRDGQVEGAAALAEMMVRGREIHRLDVVGWNA 206
Query: 129 LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS 188
LL+ YCK E A ++M+ +G + +N+L+ + G + +++ MK
Sbjct: 207 LLDGYCKSGDMEAALTAAQRMRTQGVGVDVVGYNTLVAGLCRAGEADAARGMLETMKGDG 266
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
+ P+ TY ++ N + A + EEM R G V D T S L AG F +A
Sbjct: 267 VEPNVVTYTTFIAECCRTNAVDDAFSLYEEMVRMG-VLPDVVTLSALVDGLCRAGRFSEA 325
Query: 249 ERALKELE-----------------------------------NRNAHRDLSAYQFLITL 273
+E+E +R DL Y L+
Sbjct: 326 YALFREMEKIGAAPNHVTYCTLIDSLWKARRGSESHGLLGEVVSRGVVMDLVMYTSLMDW 385
Query: 274 YGQTGNLSEVYRIWRSLRLAFPNTAN-ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY 332
G+ G + EV ++ L+ +T N ++Y +I L ++ GAE+ E E
Sbjct: 386 LGKQGKIDEVKDMFHC-ALSDNHTPNGVTYTVLIDALCRAGNVDGAEQMLLEMEDKSVHP 444
Query: 333 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
++ + +I K+G L A + + + RG DPN T+ D + + + + A+D
Sbjct: 445 NVVTFSSIINGLTKQGLLGKAADYMRKMKERGIDPNVVTYGTVMDGFFKCQEQESALD 502
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/320 (19%), Positives = 131/320 (40%), Gaps = 38/320 (11%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A L E M + G+ V + +D + + A F ++ + + NH+TY +L++
Sbjct: 290 AFSLYEEMVRMGVLPDVVTLSALVDGLCRAGRFSEAYALFREMEKIGAAPNHVTYCTLID 349
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
K ++ LL ++ + + + SLM K G +++ + + + P
Sbjct: 350 SLWKARRGSESHGLLGEVVSRGVVMDLVMYTSLMDWLGKQGKIDEVKDMFHCALSDNHTP 409
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ TY V + AL ++ GAE+++ EM+ D V + TFS++ + + GL KA
Sbjct: 410 NGVTYTVLIDALCRAGNVDGAEQMLLEME-DKSVHPNVVTFSSIINGLTKQGLLGKAADY 468
Query: 252 LKELENRNAHRDLSAY-------------------------------QFLITLYG----Q 276
+++++ R ++ Y +F++ L +
Sbjct: 469 MRKMKERGIDPNVVTYGTVMDGFFKCQEQESALDLYHEMLCEGVEVNKFIVDLLVNGLRK 528
Query: 277 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 336
G + E ++R + +++Y +I L + ++P A K +E + D V
Sbjct: 529 NGKMEEAEALFRDMNKRGMLLDHVNYTTLIDGLFKMGNMPAAFKVGQELTERNLSPDAVV 588
Query: 337 TNVMIGAYAKEGRLENAEEL 356
NV + G+ + AE +
Sbjct: 589 YNVFVNCLCMLGKSKEAESI 608
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 128/292 (43%), Gaps = 4/292 (1%)
Query: 104 QGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPF 161
+G DA E F ++ E + NH+TY ++++ + K E L ++M L +++ +
Sbjct: 78 RGGDAVE-VFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITY 136
Query: 162 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 221
N L++ + G + A++ EM + ++PD +TY++ L+ D + + +
Sbjct: 137 NVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLK 196
Query: 222 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 281
+G D+T S L + + G AE L+ L N Y LI Y QTG L
Sbjct: 197 NGVTIGDYTC-SILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELE 255
Query: 282 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 341
+ + ++ +I+Y +I L + + A+ E + + N +I
Sbjct: 256 GAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLI 315
Query: 342 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
AY + G+LE + + G PN ++ + + +NG + AV L+
Sbjct: 316 DAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILD 367
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 104/215 (48%), Gaps = 9/215 (4%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHL-----TYGSLLNCYCK 135
M+ G+N TV +D + + E F+ L E +N L +YGS++N +CK
Sbjct: 299 MQDNGVNPTVETFNTLIDAYGRTGQL---EKCFIVLSEMQENGLKPNVVSYGSIVNAFCK 355
Query: 136 ELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYT 195
+A A+L+ M ++ ++ +N+++ Y + G ++ ++++MK++ I P T
Sbjct: 356 NGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVT 415
Query: 196 YNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 255
YN+ ++ L + IS AE +I + R+ D +++ L S G +KA + +
Sbjct: 416 YNLLIKGLCNQSQISEAEEIINSLSNH-RLIPDAVSYNTLISACCYRGNIDKALDLQQRM 474
Query: 256 ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
+ Y LI+ G G L+E+ +++ +
Sbjct: 475 HKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKM 509
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 116/277 (41%), Gaps = 10/277 (3%)
Query: 121 KNHLTYGS-----LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
KN +T G LLN CK+ AE +L+ + L + + +N+L+ Y +TG E
Sbjct: 196 KNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELE 255
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
+ +MK+ I PD TYN + L I+ A+ ++ EM+ +G V TF+ L
Sbjct: 256 GAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNG-VNPTVETFNTL 314
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLA 293
Y G EK L E++ ++ +Y ++ + + G + E I + +
Sbjct: 315 IDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDV 374
Query: 294 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
PN Y +I V A ++ +S + I N++I + ++ A
Sbjct: 375 LPNAQ--VYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEA 432
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
EE+ P+A ++ G++ A+D
Sbjct: 433 EEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALD 469
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 116/267 (43%), Gaps = 9/267 (3%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+H+TY +L+N CK A+ LL +M++ + + FN+L+ Y +TG EK ++
Sbjct: 272 DHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVL 331
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYV 240
EM+ + + P+ +Y + A I A ++++M +D V + ++ + YV
Sbjct: 332 SEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKD--VLPNAQVYNAIIDAYV 389
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL---RLAFPNT 297
E G ++A ++++++ + Y LI +SE I SL RL P+
Sbjct: 390 EHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRL-IPDA 448
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
+SY +I ++ A + +R + +I GRL E L
Sbjct: 449 --VSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLY 506
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGD 384
++ + P+ I + Y + G+
Sbjct: 507 QKMMQNNVVPSNAIHNIMVEAYSKYGN 533
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 155/376 (41%), Gaps = 23/376 (6%)
Query: 77 LSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE-TSKNHLTYGSLLNCYCK 135
L E +E++ V+ A+ V + + +AAE Y LP N +TY S+++ +CK
Sbjct: 311 LQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK 370
Query: 136 ELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYT 195
+ + AE + M F +L+ Y + ++ EM ++ ++ T
Sbjct: 371 QDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVT 430
Query: 196 YNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 255
YN + V D++ A + ++M G V D T + L + G + A K +
Sbjct: 431 YNTLIHGFCLVGDLNAALDLSQQMISSG-VCPDIVTCNTLLDGLCDNGKLKDALEMFKAM 489
Query: 256 ENRNAHRDLS-----------AYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISY 302
+ D S Y LI G E ++ + R P+T I+Y
Sbjct: 490 QKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDT--ITY 547
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+MI L L A + F S + ++ N +I Y K GR+++ EL R
Sbjct: 548 SSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGR 607
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ 422
RG +A + + + G++ A+D ++ I +G P + TIR + F
Sbjct: 608 RGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSG------VYPDTITIRNMLTGFWS 661
Query: 423 EKDVDGAEGFLEILKK 438
+++++ A LE L++
Sbjct: 662 KEELERAVAMLEDLQR 677
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/313 (20%), Positives = 123/313 (39%), Gaps = 43/313 (13%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+T+ +LL+ C + +A L ++ ++ + F +LM + G + A++
Sbjct: 152 VTFTTLLHGLCLDHRVSEALDLFHQICRPDV----LTFTTLMNGLCREGRVVEAVALLDR 207
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGA--------------------ERVIEEMKRDG 223
M + + PD TY ++ + + D A +I+ + +DG
Sbjct: 208 MVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDG 267
Query: 224 R---------------VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQ 268
R + + T++ + + +G + A+R L+E+ R ++ Y
Sbjct: 268 RHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYN 327
Query: 269 FLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE 326
LI + + G E ++ + R PNT I+Y +MI L AE F
Sbjct: 328 ALINAFVKEGKFFEAAELYDEMLPRGIIPNT--ITYNSMIDGFCKQDRLDAAEDMFYLMA 385
Query: 327 SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 386
+ + D+ +I Y R+++ EL RRG N T+ + GD+
Sbjct: 386 TKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLN 445
Query: 387 LAVDCLEKAIDTG 399
A+D ++ I +G
Sbjct: 446 AALDLSQQMISSG 458
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 138/347 (39%), Gaps = 23/347 (6%)
Query: 109 AENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMT 166
+ N F+++ + N +TY ++ +C A+ LL++M E + + + +N+L+
Sbjct: 272 SHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALIN 331
Query: 167 LYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA 226
+ K G + + EM I+P++ TYN + + + AE + M G +
Sbjct: 332 AFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKG-CS 390
Query: 227 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
D TF+ L Y A + L E+ R + Y LI + G+L+ +
Sbjct: 391 PDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDL 450
Query: 287 WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESG-----------CATYDIR 335
+ + + ++ ++ L + L A + FK + D+
Sbjct: 451 SQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVL 510
Query: 336 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 395
N++I EG+ AEEL E RG P+ T+ D + L++A
Sbjct: 511 TYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR-------LDEA 563
Query: 396 IDTGRGDGGK-WVPSSETIRTFMRHFEQEKDV-DGAEGFLEILKKAV 440
G K + P+ T T + + + V DG E F E+ ++ +
Sbjct: 564 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGI 610
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/405 (19%), Positives = 158/405 (39%), Gaps = 27/405 (6%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK---NHLTYGSLL 130
A+ L + M + G+ +D + K+ +A N + E S N + Y +++
Sbjct: 201 AVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAII 260
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
+ CK+ + L +M++ + + + +N ++ + +G ++QEM I
Sbjct: 261 DGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKIS 320
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
P+ TYN + A A + +EM G + + T++++ + + + AE
Sbjct: 321 PNVVTYNALINAFVKEGKFFEAAELYDEMLPRG-IIPNTITYNSMIDGFCKQDRLDAAED 379
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQV 308
+ + D+ + LI Y + + + + R NT ++Y +I
Sbjct: 380 MFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANT--VTYNTLIHG 437
Query: 309 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR------ 362
+ DL A ++ S DI N ++ G+L++A E+ + ++
Sbjct: 438 FCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLD 497
Query: 363 -----RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 417
G +P+ T+ I + G A + E+ G VP + T + +
Sbjct: 498 ASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRG------IVPDTITYSSMI 551
Query: 418 RHFEQEKDVDGA-EGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 461
++ +D A + F+ + K+ V F LI Y AGR
Sbjct: 552 DGLCKQSRLDEATQMFVSMGSKSFSP-NVVTFNTLINGYCKAGRV 595
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 12/163 (7%)
Query: 109 AENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMT 166
AE + ++P + +TY S+++ CK+ ++A + M + + + FN+L+
Sbjct: 528 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLIN 587
Query: 167 LYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA 226
Y K G + + EM I+ D+ Y + V +I+GA + +EM G V
Sbjct: 588 GYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSG-VY 646
Query: 227 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQF 269
D T N+ + + E+ ERA+ LE DL YQ
Sbjct: 647 PDTITIRNMLTGFWSK---EELERAVAMLE------DLQRYQL 680
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 128/292 (43%), Gaps = 4/292 (1%)
Query: 104 QGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPF 161
+G DA E F ++ E + NH+TY ++++ + K E L ++M L +++ +
Sbjct: 30 RGGDAVE-VFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITY 88
Query: 162 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 221
N L++ + G + A++ EM + ++PD +TY++ L+ D + + +
Sbjct: 89 NVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLK 148
Query: 222 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 281
+G D+T S L + + G AE L+ L N Y LI Y QTG L
Sbjct: 149 NGVTIGDYTC-SILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELE 207
Query: 282 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 341
+ + ++ +I+Y +I L + + A+ E + + N +I
Sbjct: 208 GAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLI 267
Query: 342 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
AY + G+LE + + G PN ++ + + +NG + AV L+
Sbjct: 268 DAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILD 319
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 116/277 (41%), Gaps = 10/277 (3%)
Query: 121 KNHLTYGS-----LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
KN +T G LLN CK+ AE +L+ + L + + +N+L+ Y +TG E
Sbjct: 148 KNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELE 207
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
+ +MK+ I PD TYN + L I+ A+ ++ EM+ +G V TF+ L
Sbjct: 208 GAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNG-VNPTVETFNTL 266
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLA 293
Y G EK L E++ ++ +Y ++ + + G + E I + +
Sbjct: 267 IDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDV 326
Query: 294 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
PN Y +I V A ++ +S + I N++I + ++ A
Sbjct: 327 LPNAQ--VYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEA 384
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
EE+ P+A ++ G++ A+D
Sbjct: 385 EEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALD 421
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 104/215 (48%), Gaps = 9/215 (4%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHL-----TYGSLLNCYCK 135
M+ G+N TV +D + + E F+ L E +N L +YGS++N +CK
Sbjct: 251 MQDNGVNPTVETFNTLIDAYGRTGQL---EKCFIVLSEMQENGLKPNVVSYGSIVNAFCK 307
Query: 136 ELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYT 195
+A A+L+ M ++ ++ +N+++ Y + G ++ ++++MK++ I P T
Sbjct: 308 NGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVT 367
Query: 196 YNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 255
YN+ ++ L + IS AE +I + R+ D +++ L S G +KA + +
Sbjct: 368 YNLLIKGLCNQSQISEAEEIINSLSNH-RLIPDAVSYNTLISACCYRGNIDKALDLQQRM 426
Query: 256 ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
+ Y LI+ G G L+E+ +++ +
Sbjct: 427 HKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKM 461
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 116/267 (43%), Gaps = 9/267 (3%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+H+TY +L+N CK A+ LL +M++ + + FN+L+ Y +TG EK ++
Sbjct: 224 DHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVL 283
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYV 240
EM+ + + P+ +Y + A I A ++++M +D V + ++ + YV
Sbjct: 284 SEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKD--VLPNAQVYNAIIDAYV 341
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL---RLAFPNT 297
E G ++A ++++++ + Y LI +SE I SL RL P+
Sbjct: 342 EHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRL-IPDA 400
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
+SY +I ++ A + +R + +I GRL E L
Sbjct: 401 --VSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLY 458
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGD 384
++ + P+ I + Y + G+
Sbjct: 459 QKMMQNNVVPSNAIHNIMVEAYSKYGN 485
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 117/265 (44%), Gaps = 1/265 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +L+ YC+E + E+A ++ M + L S +N+++ K G + I+ E
Sbjct: 154 VTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIE 213
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + PD+ TYN + ++ S A+ + EM R G V D +FS+L +++
Sbjct: 214 MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQG-VVPDLVSFSSLIAVFSRNR 272
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
++A ++++ D Y L+ Y + GN+ E +I + I+Y
Sbjct: 273 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 332
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
++ L K L A+K F E A D +I + ++G + A L +R
Sbjct: 333 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 392
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLA 388
P+ + D + + G+M+ A
Sbjct: 393 NIKPDIVAYNTLIDGFCKVGEMEKA 417
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 99/214 (46%), Gaps = 3/214 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP--ETSKNHLTYGSLLN 131
AL L M +R + + +D KV ++ A + + + NH+TYG L+N
Sbjct: 382 ALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILIN 441
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
YC +A L + M E + + + N+++ Y ++G K + M A + P
Sbjct: 442 AYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAP 501
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D +YN + +++ A I +M+++G + D T++ + + + G ++AE
Sbjct: 502 DHISYNTLINGFVREDNMDKAFLWINKMEKEG-LLPDIITYNVVMNGFCRQGRMQEAELV 560
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 285
L+++ + + D S Y LI + NL+E +R
Sbjct: 561 LRKMIEKGINPDRSTYTALINGHVTQDNLNEAFR 594
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 143/344 (41%), Gaps = 13/344 (3%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N T ++N CK+ + ++ L +M+ + + +N+L+ Y + G E+ I+
Sbjct: 117 NVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIM 176
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M + P +TYN + L + A+ ++ EM G ++ D TT++ L
Sbjct: 177 NSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIG-LSPDTTTYNTLLVESCR 235
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
F +A+ E+ + DL ++ LI ++ + +L + +R ++ N+
Sbjct: 236 RDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVI 295
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
Y ++ ++ A K E E GC D+ N ++ KE L +A++L +
Sbjct: 296 YTVLMHGYCRNGNMLEALKIRDEMLEQGCV-LDVIAYNTILNGLCKEKMLTDADKLFDEM 354
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 420
RGA P+ T+ + ++G+M A+ T R V + I F +
Sbjct: 355 VERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTM--TQRNIKPDIVAYNTLIDGFCKVG 412
Query: 421 EQEKDVDGAEGFL--EILKKAVDDLGVEVFEPLIRTYAAAGRTS 462
E EK + +G + +I + + LI Y + G S
Sbjct: 413 EMEKASELWDGMISRKIFPNHI------TYGILINAYCSVGHVS 450
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 135/316 (42%), Gaps = 17/316 (5%)
Query: 117 PETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK 176
P+T+ TY +LL C+ +A+ + +M + + F+SL+ ++++ H ++
Sbjct: 221 PDTT----TYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQ 276
Query: 177 IPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLA 236
++MK ++PD+ Y V M ++ A ++ +EM G V D ++ +
Sbjct: 277 ALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCV-LDVIAYNTIL 335
Query: 237 SIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPN 296
+ + + A++ E+ R A D + LI + Q GN+++ ++ ++
Sbjct: 336 NGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIK 395
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCA--TYDIRVT-NVMIGAYAKEGRLENA 353
++Y +I + ++ EK + W+ + + +T ++I AY G + A
Sbjct: 396 PDIVAYNTLIDGFCKVGEM---EKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEA 452
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETI 413
L + +G P T Y R+GD A + L + I G P +
Sbjct: 453 FRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVA------PDHISY 506
Query: 414 RTFMRHFEQEKDVDGA 429
T + F +E ++D A
Sbjct: 507 NTLINGFVREDNMDKA 522
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/301 (20%), Positives = 125/301 (41%), Gaps = 38/301 (12%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK--NHLTYGSLLN 131
ALK+ + M ++G V L+ + K + + A+ F ++ E + T+ +L++
Sbjct: 312 ALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIH 371
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C++ KA +L M + N+ + +N+L+ + K G EK + M + I P
Sbjct: 372 GHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFP 431
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ TY + + A +V +S A R+ + M G + T + + Y +G KA+
Sbjct: 432 NHITYGILINAYCSVGHVSEAFRLWDVMIEKG-IKPTLVTCNTVIKGYCRSGDSSKADEF 490
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
L + + D +Y LI + + N+ + + +W
Sbjct: 491 LGRMIAKGVAPDHISYNTLINGFVREDNMDKAF-LW------------------------ 525
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+ E DI NV++ + ++GR++ AE + + +G +P+ T
Sbjct: 526 ----------INKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRST 575
Query: 372 W 372
+
Sbjct: 576 Y 576
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 98/240 (40%), Gaps = 5/240 (2%)
Query: 162 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 221
NSL+ K E + +E+ S I + YT N+ + AL + + EM+
Sbjct: 87 NSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEG 146
Query: 222 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 281
+G + AD T++ L Y GL E+A + + ++ L Y +I + G +
Sbjct: 147 NG-IYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYA 205
Query: 282 EVYRIW-RSLRLAF-PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
I L + P+T +Y ++ + A++ F E D+ +
Sbjct: 206 RAKGILIEMLNIGLSPDTT--TYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSS 263
Query: 340 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+I +++ L+ A ++ G P+ + + Y RNG+M A+ ++ ++ G
Sbjct: 264 LIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQG 323
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 55/110 (50%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
+ +H++Y +L+N + +E +KA + KM++ L + +N +M + + G ++
Sbjct: 499 VAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAE 558
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAAD 228
++++M I PD TY + ++++ A R +EM + G D
Sbjct: 559 LVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDD 608
>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 477
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/384 (19%), Positives = 163/384 (42%), Gaps = 17/384 (4%)
Query: 56 WEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVD 115
+ + L L K Y + L + + G+ + I ++ + I A + F +
Sbjct: 94 FHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSVFAN 153
Query: 116 LPETS--KNHLTYGSLLN--CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKT 171
+ + + +T +L+ C+C E+ ++A +K+ + + +L+ K
Sbjct: 154 ILKRGYHPDAITLNTLIKGLCFCGEI--KRALYFHDKVVAQGFQLDQVSYGTLINGLCKA 211
Query: 172 GHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTT 231
G + + ++++++ S+ PD Y + L + A + EM G ++ + T
Sbjct: 212 GETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKG-ISPNVFT 270
Query: 232 FSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 291
++ L + G ++A L E++ +N + D+ + LI G+ G + E ++ ++
Sbjct: 271 YNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMK 330
Query: 292 L--AFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGR 349
FPN ++Y ++I L L A K+ + D+ +++ A K GR
Sbjct: 331 HKNMFPNI--VTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGR 388
Query: 350 LENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPS 409
LENA++ + +G N +T+ + + + G +D K +G +P
Sbjct: 389 LENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKM------EGKGCMPD 442
Query: 410 SETIRTFMRHFEQEKDVDGAEGFL 433
+ T +T + ++ + D AE FL
Sbjct: 443 AITFKTIICALFEKDENDKAEKFL 466
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/311 (18%), Positives = 119/311 (38%), Gaps = 7/311 (2%)
Query: 162 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 221
N L+ + H ++ + PD+ T N ++ L +I A +++
Sbjct: 132 NILINCFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVA 191
Query: 222 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 281
G D ++ L + +AG + R L++LE + D+ Y +I + +
Sbjct: 192 QG-FQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVG 250
Query: 282 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 341
+ ++ + + + +Y +I + +L A E + D+ N++I
Sbjct: 251 DACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILI 310
Query: 342 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRG 401
A KEG+++ A L E + + PN T+ D +N ++ A+ +K + G
Sbjct: 311 DALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQG-- 368
Query: 402 DGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 461
P + + + ++ A+ F + L L V + +I AG
Sbjct: 369 ----IQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLF 424
Query: 462 SPVMLRRLKME 472
VM + KME
Sbjct: 425 GDVMDLKSKME 435
>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 144/338 (42%), Gaps = 21/338 (6%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ + YG+++N CK T A + KMK++ + + + +N+++ K G ++ +
Sbjct: 174 DEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLC 233
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EM + I D Y+YN + +V A ++++EM G+V D TF+ L +
Sbjct: 234 TEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCK 293
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTAN 299
G +A + + R D+ +Y L+ Y +G++ E +++ + R A PN
Sbjct: 294 LGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNV-- 351
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
ISY +I ++ + A E + D N ++ +K GR +L E
Sbjct: 352 ISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEA 411
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
R G + T+ + D Y ++ A+ + I+ G S IRT+
Sbjct: 412 MRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIG---------ISPNIRTY--- 459
Query: 420 FEQEKDVDGA--EGFLEILKKAVDDLGVEVFEPLIRTY 455
+DG G L+ K+ L + +P IRTY
Sbjct: 460 ---NILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTY 494
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/333 (20%), Positives = 137/333 (41%), Gaps = 43/333 (12%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N + Y ++++ CK+ + ++A L +M E + +NS++ + G + ++
Sbjct: 209 NLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLL 268
Query: 182 QEMKA-SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
EM + PD YT+N+ + L + +S A V+ M + G D +++ L + Y
Sbjct: 269 DEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGW-KPDIVSYNALMNGYC 327
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTA 298
+G +A++ ++ R A ++ +Y LI Y + + E + + + P+T
Sbjct: 328 LSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTV 387
Query: 299 NISYL---------------------------NMIQVLVNLKDLPGAEK------CFKEW 325
+ L ++I V L D EK F+
Sbjct: 388 TYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHI 447
Query: 326 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 385
+ +IR N+++ K GRL+ A+E+ + +G PN +T+ I + G +
Sbjct: 448 IEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFL 507
Query: 386 KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 418
A L K ++ ++P+ T T +R
Sbjct: 508 DEAEALLYKMVN------NNYLPNYITFDTIVR 534
>gi|255661196|gb|ACU25767.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 426
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 121/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM+ + +++L+ L K K +
Sbjct: 6 SPDKYTYSTLITHFGKEGLFDDALSWLQKMEHDRVRGDLXLYSNLIELSRKLCDYSKAIS 65
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S I PD YN + A +I EM+ G V D +++ L ++Y
Sbjct: 66 IFSRLKRSGITPDLVVYNSMINVFGKAKLFREARSLICEMRTXG-VMPDTVSYTTLLTMY 124
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ S+R
Sbjct: 125 VENKKFIEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGVEPNV 184
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 185 VSYNTLLRVYSDAELFGEAXHLFRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PNA T+ + + G + A EK +G
Sbjct: 245 MQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFEKLRSSG 284
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 125/267 (46%), Gaps = 20/267 (7%)
Query: 76 KLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLNCY 133
KL +M K G+ V L + + + A + F + + +N +TY S++ Y
Sbjct: 170 KLFWSMRKLGVEPNVVSYNTLLRVYSDAELFGEAXHLFRLMQRKDIEQNVVTYNSMMMIY 229
Query: 134 CKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDS 193
K L EKA L+++M+ + +++ ++++++++ K G ++ + +++++S I D
Sbjct: 230 GKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFEKLRSSGIEIDQ 289
Query: 194 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 253
Y + A +S A+R++ E+K + D T LA +G E+A +
Sbjct: 290 VLYQTMIVAYERAGLVSHAKRLLHELKTPDNIPRD-TAIQILAG----SGRMEEATWVFR 344
Query: 254 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVN 311
+ + +D++ ++ +I L+ + S V ++ +R FP++ N+I +++N
Sbjct: 345 QAIDAGEVKDITVFEQMIDLFSKYRKYSNVVEVFDKMRGLGYFPDS------NVIALVLN 398
Query: 312 ----LKDLPGAEKCFKEWES-GCATYD 333
L D A + E + GC D
Sbjct: 399 AYGKLHDFEKANDVYLEMQDEGCVFSD 425
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 138/325 (42%), Gaps = 16/325 (4%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +T+ L+ +C+ M E+A +LE+M ++ N ++ K G + +
Sbjct: 315 NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFL 374
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M + PD+ +Y ++ L A+ +++EM R + TF+ I +
Sbjct: 375 NNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN-CPPNEVTFNTFICILCQ 433
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
GL E+A ++++ ++ Y L+ + G + ++ S+ PNT I+
Sbjct: 434 KGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK-PNT--IT 490
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
Y ++ L N + L A + E + CA ++ NV++ + ++G ++ A EL E+
Sbjct: 491 YTTLLTGLCNAERLDAAAELLAEMLQKDCAP-NVVTFNVLVSFFCQKGLMDEAIELVEQM 549
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 420
G PN T+ D ++ + + A++ L + G P T + +
Sbjct: 550 MEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVS------PDIVTYSSIIGVL 603
Query: 421 EQEKDVDGAEGFLEILKKAVDDLGV 445
+E V+ A I V DLG+
Sbjct: 604 SREDRVEEAIKMFHI----VQDLGM 624
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 89/432 (20%), Positives = 169/432 (39%), Gaps = 52/432 (12%)
Query: 62 LKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL--PET 119
++ L DR AL L ++M RG +V + L+ V K G A ++
Sbjct: 183 IRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGC 242
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
+ N +TY ++N C+E + A L ++ ++ + +++ E +
Sbjct: 243 TPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEE 302
Query: 180 IIQEMKASSIMPDSYTYNVWM----------RALAAVNDISG---------AERVIEEMK 220
+ EM + MP+ T+++ + RA+ + +SG VI +
Sbjct: 303 LFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTIC 362
Query: 221 RDGRVAADWTTFSNLAS----------IYVEAGL-----FEKAERALKELENRNAHRDLS 265
+ GRV + +N+ S V GL +E A+ LKE+ +N +
Sbjct: 363 KQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEV 422
Query: 266 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 325
+ I + Q G + + + + ++Y ++ + A + F +
Sbjct: 423 TFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF--Y 480
Query: 326 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 385
C I T ++ G E RL+ A EL ++ PN T+ + ++ + G M
Sbjct: 481 SMPCKPNTITYTTLLTGLCNAE-RLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLM 539
Query: 386 KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGV 445
A++ +E+ ++ G P+ T T + KD + E LE+L V + GV
Sbjct: 540 DEAIELVEQMMEHG------CTPNLITYNTLLDGI--TKDCNSEEA-LELLHGLVSN-GV 589
Query: 446 EVFEPLIRTYAA 457
P I TY++
Sbjct: 590 ---SPDIVTYSS 598
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/303 (18%), Positives = 123/303 (40%), Gaps = 10/303 (3%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A+++ E M G + I ++ + K +D A + ++ S + ++Y ++L
Sbjct: 335 AIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLK 394
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C+ E A+ LL++M N + + FN+ + + + G E+ +I++M
Sbjct: 395 GLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEV 454
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ TYN + + A + M + T++ L + A + A
Sbjct: 455 NIVTYNALVNGFCVQGRVDSALELFYSMP----CKPNTITYTTLLTGLCNAERLDAAAEL 510
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVL 309
L E+ ++ ++ + L++ + Q G + E + + PN I+Y ++ +
Sbjct: 511 LAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNL--ITYNTLLDGI 568
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
+ A + S + DI + +IG ++E R+E A ++ + G P A
Sbjct: 569 TKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKA 628
Query: 370 KTW 372
+
Sbjct: 629 VIY 631
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/296 (19%), Positives = 116/296 (39%), Gaps = 6/296 (2%)
Query: 106 IDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLM 165
+DAA +P + + TY ++ C +A +LL+ M S + + L+
Sbjct: 160 LDAARRLIASMP-VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLL 218
Query: 166 TLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRV 225
K+ + ++ EM+A P+ TYNV + + + A + + G
Sbjct: 219 EAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYG-F 277
Query: 226 AADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 285
D +++ + A +E E E+ +N + + L+ + + G + +
Sbjct: 278 QPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQ 337
Query: 286 IWRSLRLAFPNTANISYLNM-IQVLVNLKDLPGAEKCFKEWES-GCATYDIRVTNVMIGA 343
+ + AN + N+ I + + A + S GC+ I T V+ G
Sbjct: 338 VLEQMS-GHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGL 396
Query: 344 YAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
E R E+A+EL + R+ PN T+ F + G ++ A +E+ + G
Sbjct: 397 CRAE-RWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHG 451
>gi|3107905|dbj|BAA25906.1| leaf protein [Ipomoea nil]
Length = 665
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 128/276 (46%), Gaps = 4/276 (1%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM- 184
+ ++N +C+ ++A + KM+E ++ FN+L+ + G PE+ +++ M
Sbjct: 141 FNPMINAFCESGNVKEAMKIFRKMREKGCKPTASTFNALIKGFGIIGKPEESSKLLEIMS 200
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ +I PD TYN+ ++A N+I A V+ M G + D T++ +A Y
Sbjct: 201 REENIKPDDRTYNILVQAWCNKNNIEKAWGVVHRMVGAG-LKPDVVTYNTIARAYARGKE 259
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+A + +++N ++ ++ Y + GN+++ + ++ F N+ N
Sbjct: 260 TSRAAELISQMQNNKVAPNVRTCGIVVDGYSKEGNMADALKFIYKMQ-GFGVHPNLFIFN 318
Query: 305 -MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+++ +++ D G ++ + D+ + ++ A++ G +E EE+ + +
Sbjct: 319 SLLKGFLDITDTKGVDETLTLMQEFGVKPDVVTYSTIMNAWSSAGLMEKCEEMFQDMIKS 378
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
G +P+ + I + Y+R G+ K A LE G
Sbjct: 379 GIEPDNHAFSILAKGYVRAGEPKKAEALLEAMATHG 414
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 88/195 (45%), Gaps = 9/195 (4%)
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
+ + N T G +++ Y KE A + KM+ + + FNSL+ + + +
Sbjct: 274 KVAPNVRTCGIVVDGYSKEGNMADALKFIYKMQGFGVHPNLFIFNSLLKGFLDITDTKGV 333
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
+ M+ + PD TY+ M A ++ + E + ++M + G + D FS LA
Sbjct: 334 DETLTLMQEFGVKPDVVTYSTIMNAWSSAGLMEKCEEMFQDMIKSG-IEPDNHAFSILAK 392
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW-RSLRLAF-P 295
YV AG +KAE L+ + AH ++ + +I+ + + + R++ R R+ P
Sbjct: 393 GYVRAGEPKKAEALLEAMATHGAHPNVVMFTTIISGWCSAAKMEDALRVYDRMCRMDVQP 452
Query: 296 NTANISYLNMIQVLV 310
N LN + L+
Sbjct: 453 N------LNTFETLI 461
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 77/180 (42%), Gaps = 12/180 (6%)
Query: 97 LDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGF 156
L + K+QG N F+ + SLL + T+ + L M+E +
Sbjct: 299 LKFIYKMQGFGVHPNLFI-----------FNSLLKGFLDITDTKGVDETLTLMQEFGVKP 347
Query: 157 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
+ ++++M ++ G EK + Q+M S I PD++ +++ + + AE ++
Sbjct: 348 DVVTYSTIMNAWSSAGLMEKCEEMFQDMIKSGIEPDNHAFSILAKGYVRAGEPKKAEALL 407
Query: 217 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 276
E M G + F+ + S + A E A R + + +L+ ++ LI YG+
Sbjct: 408 EAMATHG-AHPNVVMFTTIISGWCSAAKMEDALRVYDRMCRMDVQPNLNTFETLIWGYGE 466
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/252 (17%), Positives = 94/252 (37%), Gaps = 36/252 (14%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY ++ Y + T +A L+ +M+ + + ++ Y+K G+ I +
Sbjct: 245 VTYNTIARAYARGKETSRAAELISQMQNNKVAPNVRTCGIVVDGYSKEGNMADALKFIYK 304
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ + P+ + +N ++ + D G + + M+ G V D T+S + + + AG
Sbjct: 305 MQGFGVHPNLFIFNSLLKGFLDITDTKGVDETLTLMQEFG-VKPDVVTYSTIMNAWSSAG 363
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
L EK E +++ D A+ L Y + G +
Sbjct: 364 LMEKCEEMFQDMIKSGIEPDNHAFSILAKGYVRAGEPKK--------------------- 402
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
AE + + A ++ + +I + ++E+A + +R R
Sbjct: 403 --------------AEALLEAMATHGAHPNVVMFTTIISGWCSAAKMEDALRVYDRMCRM 448
Query: 364 GADPNAKTWEIF 375
PN T+E
Sbjct: 449 DVQPNLNTFETL 460
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/297 (18%), Positives = 119/297 (40%), Gaps = 8/297 (2%)
Query: 164 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
LM + G P+++ +I + + P TY + AL ++++++++G
Sbjct: 74 LMKTLIERGKPQEVHSITKGLTEEGHRPTLVTYTTVLAALTLQKRFKSIPLLLKKVEQNG 133
Query: 224 RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 283
+ D F+ + + + E+G ++A + +++ + S + LI +G G E
Sbjct: 134 -LRPDSIFFNPMINAFCESGNVKEAMKIFRKMREKGCKPTASTFNALIKGFGIIGKPEES 192
Query: 284 YRIWRSL-RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 342
++ + R + +Y ++Q N ++ A D+ N +
Sbjct: 193 SKLLEIMSREENIKPDDRTYNILVQAWCNKNNIEKAWGVVHRMVGAGLKPDVVTYNTIAR 252
Query: 343 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGD 402
AYA+ A EL + + PN +T I D Y + G+M A+ + K
Sbjct: 253 AYARGKETSRAAELISQMQNNKVAPNVRTCGIVVDGYSKEGNMADALKFIYKM------Q 306
Query: 403 GGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
G P+ + ++ F D G + L ++++ V + ++ +++AG
Sbjct: 307 GFGVHPNLFIFNSLLKGFLDITDTKGVDETLTLMQEFGVKPDVVTYSTIMNAWSSAG 363
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 69/163 (42%), Gaps = 1/163 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +++N + + EK E + + M + + + F+ L Y + G P+K A+++
Sbjct: 350 VTYSTIMNAWSSAGLMEKCEEMFQDMIKSGIEPDNHAFSILAKGYVRAGEPKKAEALLEA 409
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M P+ + + + + A RV + M R V + TF L Y EA
Sbjct: 410 MATHGAHPNVVMFTTIISGWCSAAKMEDALRVYDRMCRMD-VQPNLNTFETLIWGYGEAN 468
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
KAE L+ +E + Q + + G ++E RI
Sbjct: 469 EPWKAEELLQIMEEMGVLPRKNTVQLVADAWRAIGFINEAKRI 511
>gi|410110087|gb|AFV61123.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
urticoides]
Length = 423
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 121/275 (44%), Gaps = 1/275 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +I +
Sbjct: 1 TYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRL 60
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
K+S PD YN + A +I EMK G V + T++S L ++YVE
Sbjct: 61 KSSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAG-VMPNTTSYSTLLTMYVENKK 119
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
F +A E+ DL+ +I +YGQ G E +++ +R +SY
Sbjct: 120 FLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNT 179
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+++V + + A F+ + ++ N MI Y K E A L + + RG
Sbjct: 180 LLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRG 239
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+PN+ T+ + + G + A +K +G
Sbjct: 240 IEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 274
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/276 (19%), Positives = 126/276 (45%), Gaps = 5/276 (1%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+ Y +++N + K + +A +L+ +MK + ++ +++L+T+Y + + ++ E
Sbjct: 70 VAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSE 129
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ + D T N+ + + A+++ M++ G + + +++ L +Y +A
Sbjct: 130 MREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG-IEPNVVSYNTLLRVYGDAE 188
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
LF +A + ++ +N +++ Y +I +YG+T + + + ++ +I+Y
Sbjct: 189 LFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYS 248
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I + + L A F++ S D + MI AY + G + +A+ L +R
Sbjct: 249 TIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRP 308
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
P I + G ++ A +AID G
Sbjct: 309 DNIPRDTAIHILAG----AGRIEEATYVFRQAIDAG 340
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 111/221 (50%), Gaps = 20/221 (9%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 207 QNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAML 266
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S + D + + A ++ A+R++ E+KR + D T LA
Sbjct: 267 FQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD-TAIHILAG--- 322
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + +D++ ++ +I L Y + N+ EV+ R L FP++
Sbjct: 323 -AGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGY-FPDS 380
Query: 298 ANISYLNMIQVLVN----LKDLPGAEKCFKEW-ESGCATYD 333
N+I V++N L++ A + E E GC D
Sbjct: 381 ------NVIAVVLNAYGKLQEFDKANDVYMEMQEVGCVFSD 415
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/289 (18%), Positives = 111/289 (38%), Gaps = 32/289 (11%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +Y +LL Y + +A ++ +M+E+ N ++ +Y + G ++ +
Sbjct: 103 NTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 162
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M+ I P+ +YN +R A + M+R + + T++++ IY +
Sbjct: 163 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN-IEQNVVTYNSMIMIYGK 221
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
EKA ++E+++R + Y +I+++G+ G L +++ LR + I
Sbjct: 222 TLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQIL 281
Query: 302 YLNM-------------------------------IQVLVNLKDLPGAEKCFKEWESGCA 330
+ M I +L + A F++
Sbjct: 282 FQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGE 341
Query: 331 TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 379
DI V MI +K + N E+ ++ R G P++ + + Y
Sbjct: 342 VKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSNVIAVVLNAY 390
>gi|410109867|gb|AFV61013.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia salsoloides]
Length = 410
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 116/260 (44%), Gaps = 1/260 (0%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
+ L++ +CKE A ++ + + + L S + FN+LM Y + G ++ + M
Sbjct: 131 FNILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMH 190
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
AS + PD YTY+V + L + I GA + +EM G V + TF+ L + + G
Sbjct: 191 ASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLV-PNGVTFTTLIDGHCKNGRV 249
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
+ A K++ +++ DL Y LI + G+L + + +R+ I+Y +
Sbjct: 250 DLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKITYTTL 309
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
I DL A + K D V +I +EGR +AE++ G
Sbjct: 310 IDGCCKEGDLETAFEHRKRMIQENIRLDDVVYTTLISGLCQEGRSVDAEKMLREMLSVGL 369
Query: 366 DPNAKTWEIFSDYYLRNGDM 385
P+ T+ + + + + GD+
Sbjct: 370 KPDTGTYTMIINEFCKKGDV 389
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 85/202 (42%), Gaps = 1/202 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY L+N CKE + A L ++M + L + + F +L+ + K G + I ++M
Sbjct: 200 TYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 259
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ S+ D TYN + L D+ A+ +I+EM+ G + D T++ L + G
Sbjct: 260 LSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKG-LKPDKITYTTLIDGCCKEGD 318
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
E A K + N D Y LI+ Q G + ++ R + +Y
Sbjct: 319 LETAFEHRKRMIQENIRLDDVVYTTLISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTM 378
Query: 305 MIQVLVNLKDLPGAEKCFKEWE 326
+I D+ K KE +
Sbjct: 379 IINEFCKKGDVWTGSKLLKEMQ 400
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 93/213 (43%), Gaps = 11/213 (5%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
+L M G+ V ++ ++ + K ID A F ++ + N +T+ +L++
Sbjct: 182 GFRLKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTTLID 241
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+CK + A + ++M +L + +N+L+ K G ++ +I EM+ + P
Sbjct: 242 GHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKP 301
Query: 192 DSYTYNVWMRALAAVNDISGA----ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
D TY + D+ A +R+I+E + D ++ L S + G
Sbjct: 302 DKITYTTLIDGCCKEGDLETAFEHRKRMIQE-----NIRLDDVVYTTLISGLCQEGRSVD 356
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
AE+ L+E+ + D Y +I + + G++
Sbjct: 357 AEKMLREMLSVGLKPDTGTYTMIINEFCKKGDV 389
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 55/106 (51%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ +TY +L++ CKE E A ++M + N+ + + +L++ + G ++
Sbjct: 302 DKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVVYTTLISGLCQEGRSVDAEKML 361
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAA 227
+EM + + PD+ TY + + D+ ++++EM+RDG V +
Sbjct: 362 REMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPS 407
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/199 (19%), Positives = 81/199 (40%), Gaps = 5/199 (2%)
Query: 194 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 253
Y +N+ M +I A V + + + G + +F+ L + Y+ G ++ R
Sbjct: 129 YFFNILMHRFCKEGEIRVARSVFDAITKWG-LRPSVVSFNTLMNGYIRLGDLDEGFRLKS 187
Query: 254 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVN 311
+ D+ Y LI + + ++ + + PN +++ +I
Sbjct: 188 AMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPN--GVTFTTLIDGHCK 245
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+ A + +K+ S + D+ N +I K+G L+ A+ L + R +G P+ T
Sbjct: 246 NGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKIT 305
Query: 372 WEIFSDYYLRNGDMKLAVD 390
+ D + GD++ A +
Sbjct: 306 YTTLIDGCCKEGDLETAFE 324
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 119/276 (43%), Gaps = 12/276 (4%)
Query: 162 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 221
SL+ + ++G +K I++ ++ S +PD TYNV + +I A V+E M
Sbjct: 145 TSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMS- 203
Query: 222 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 281
VA D T++ + ++G ++A L R + D+ Y LI +
Sbjct: 204 ---VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVG 260
Query: 282 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES-GCATYDIRVTNVM 340
+ ++ +R ++Y +I + L A K S GC ++ N++
Sbjct: 261 QAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKP-NVITHNII 319
Query: 341 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 400
+ + GR +AE L R+G P+ T+ I ++ R + A+D LEK G
Sbjct: 320 LRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHG- 378
Query: 401 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 436
VP+S + + F QEK +D A +LEI+
Sbjct: 379 -----CVPNSLSYNPLLHGFCQEKKMDRAIEYLEIM 409
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 129/320 (40%), Gaps = 15/320 (4%)
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
E + +TY L+ C + +A LL++M++ + +N L+ K G ++
Sbjct: 238 ECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEA 297
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
+ M + P+ T+N+ +R++ + AER++ +M R G + TF+ L +
Sbjct: 298 IKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKG-CSPSVVTFNILIN 356
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS---EVYRIWRSLRLAF 294
L +A L+++ + +Y L+ + Q + E I S R +
Sbjct: 357 FLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVS-RGCY 415
Query: 295 PNTANISYLNMIQVLVNLKDLPGAEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENA 353
P+ ++Y ++ L + A + + S GC+ I N +I K G+ E A
Sbjct: 416 PDI--VTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLI-TYNTVIDGLTKVGKTEYA 472
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETI 413
EL E RR+G P+ T+ R G + A+ +G PS+ T
Sbjct: 473 VELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDM------EGLSIKPSAVTY 526
Query: 414 RTFMRHFEQEKDVDGAEGFL 433
M + + A FL
Sbjct: 527 NAIMLGLCKAQQTSRAIDFL 546
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/277 (18%), Positives = 120/277 (43%), Gaps = 6/277 (2%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY L+ YCK +KA +LE+M ++ + +N+++ +G ++ ++
Sbjct: 177 ITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDR 233
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
PD TY + + A + + A ++++EM++ G D T++ L + + G
Sbjct: 234 QLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKG-CKPDVVTYNVLINGICKEG 292
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
++A + L + + ++ + ++ TG + R+ + + + +++
Sbjct: 293 RLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFN 352
Query: 304 NMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+I L + L A ++ + GC + N ++ + +E +++ A E E
Sbjct: 353 ILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSY-NPLLHGFCQEKKMDRAIEYLEIMVS 411
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
RG P+ T+ ++G + AV+ L + G
Sbjct: 412 RGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKG 448
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 85/185 (45%), Gaps = 3/185 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A +L +M ++G + +V I ++ + + + + A + +P+ N L+Y LL+
Sbjct: 332 AERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLH 391
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C+E ++A LE M + +N+L+T K G + I+ ++ + P
Sbjct: 392 GFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSP 451
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
TYN + L V A ++EEM+R G + D T+S L G ++A +
Sbjct: 452 VLITYNTVIDGLTKVGKTEYAVELLEEMRRKG-LKPDIITYSTLLRGLGREGKVDEAIKI 510
Query: 252 LKELE 256
++E
Sbjct: 511 FHDME 515
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/305 (20%), Positives = 115/305 (37%), Gaps = 5/305 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A+KL + M K+G V + ++ + K +D A + ++P N +T+ +L
Sbjct: 262 AMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILR 321
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C AE LL M S + FN L+ + + ++++M +P
Sbjct: 322 SMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVP 381
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+S +YN + + A +E M G D T++ L + + G + A
Sbjct: 382 NSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRG-CYPDIVTYNTLLTALCKDGKVDAAVEI 440
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
L +L ++ L Y +I + G + +R I+Y +++ L
Sbjct: 441 LNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGR 500
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVT-NVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
+ A K F + E G + VT N ++ K + A + +G P
Sbjct: 501 EGKVDEAIKIFHDME-GLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEA 559
Query: 371 TWEIF 375
T+ I
Sbjct: 560 TYTIL 564
>gi|357124917|ref|XP_003564143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Brachypodium distachyon]
Length = 1285
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 125/277 (45%), Gaps = 7/277 (2%)
Query: 109 AENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMT 166
AE F +L E + +TY SLL + KE + E + E++ + +N+++
Sbjct: 189 AERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFKKDGITYNTMIH 248
Query: 167 LYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA 226
+Y K G + + EM+A PD+ TY V + +L ++ IS A +V+EEM D +
Sbjct: 249 MYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAGKVLEEMA-DAGLK 307
Query: 227 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
TFS L Y + G E+A R + D AY ++ + ++G++ ++ +
Sbjct: 308 PTLVTFSALICAYAKGGRREEAVRTFSHMVASGVKPDRLAYLVMLDIIARSGDMRKLMAL 367
Query: 287 WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAK 346
++++ N Y M+ L + E ++ E C V++++I A
Sbjct: 368 YQTMMNDGYRPDNALYQVMLAALAKGNEYDEIEAVVQDMEVVCQMNPQLVSSILIKAEC- 426
Query: 347 EGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
+ +L ++A +G +P++K+ D Y G
Sbjct: 427 ---ISQGAKLLKKACLQGHEPDSKSLLSILDAYETTG 460
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 118/271 (43%), Gaps = 3/271 (1%)
Query: 118 ETSKNHLTYGSLLNCYCKE--LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
E + +++ +L+N K L A LL +++++ L + +N+L++ ++ + +
Sbjct: 93 ELEPDLVSFNTLINARAKSGCLAPGSAFDLLLEVRQVGLRPDVITYNTLISACSQGSNLD 152
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
A+ +EM AS PD +TYN + AER+ E+ G D T+++L
Sbjct: 153 DAVAVFEEMMASECRPDLWTYNAMVSVHGRCGKAQDAERMFRELVEKG-FKPDAVTYNSL 211
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
+ + G + ER +EL +D Y +I +YG+ G L ++ +R
Sbjct: 212 LYAFAKEGDADTVERVCEELVRAGFKKDGITYNTMIHMYGKMGRLDLALGLYDEMRALGC 271
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEE 355
++Y +I L + + A K +E + + +I AYAK GR E A
Sbjct: 272 TPDAVTYTVLIDSLGKMDRISDAGKVLEEMADAGLKPTLVTFSALICAYAKGGRREEAVR 331
Query: 356 LKERARRRGADPNAKTWEIFSDYYLRNGDMK 386
G P+ + + D R+GDM+
Sbjct: 332 TFSHMVASGVKPDRLAYLVMLDIIARSGDMR 362
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 119/289 (41%), Gaps = 5/289 (1%)
Query: 113 FVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTG 172
F LP + + +++ Y + + LL+ M+ L + FN+L+ AK+G
Sbjct: 55 FPHLPGATVQ--VFNAMMGVYARSGRFDDVRQLLDAMRGQELEPDLVSFNTLINARAKSG 112
Query: 173 --HPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWT 230
P ++ E++ + PD TYN + A + +++ A V EEM D
Sbjct: 113 CLAPGSAFDLLLEVRQVGLRPDVITYNTLISACSQGSNLDDAVAVFEEMMA-SECRPDLW 171
Query: 231 TFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
T++ + S++ G + AER +EL + D Y L+ + + G+ V R+ L
Sbjct: 172 TYNAMVSVHGRCGKAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEEL 231
Query: 291 RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRL 350
A I+Y MI + + L A + E + T D V+I + K R+
Sbjct: 232 VRAGFKKDGITYNTMIHMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRI 291
Query: 351 ENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+A ++ E G P T+ Y + G + AV + +G
Sbjct: 292 SDAGKVLEEMADAGLKPTLVTFSALICAYAKGGRREEAVRTFSHMVASG 340
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 111/295 (37%), Gaps = 42/295 (14%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y L+ C + +A + M+ + + S + S+++ Y K G PE ++ E
Sbjct: 522 YEYLITCLEEAEFFPEASQVFSDMQFIGIEPSRKIYESMISAYCKLGFPETAHQLMDEAV 581
Query: 186 ASSIMPDSYTYNVWM-RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
S I + + V M A + AE ++ +K++ + D ++ L Y E+GL
Sbjct: 582 QSGISLNILSSRVTMIEAYGKIKLWQHAENFVKGLKQEPSI--DRRIWNALIHAYAESGL 639
Query: 245 FEKAE----------------------RAL-------------KELENRNAHRDLSAYQF 269
+E A RAL +EL++ S
Sbjct: 640 YEHARAVFDIMIEKGPLPTIDSVNGMMRALIIDGRLDELYVIVQELQDMGFKISKSTVIL 699
Query: 270 LITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES 327
++ + + G++ EV +I+ ++ A PN Y +MI +L K E E E
Sbjct: 700 MLDAFTKAGDIFEVMKIYNGMKEAGYLPNMH--IYRSMISLLCRNKRYRDVELMVVEMER 757
Query: 328 GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 382
D+ + N ++ Y G + E+ G +PN T+ Y RN
Sbjct: 758 AGFEPDLTILNTLLLMYTGNGNFDKTVEVYHSILEAGLEPNEDTYNTLIVMYSRN 812
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 99/244 (40%), Gaps = 19/244 (7%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK--NHLTYGSLLN 131
L M K+G+ + L K + + AE F ++ N Y L+
Sbjct: 818 GFTLLNEMGKKGLTPKLESYKSLLAASGKAKLWEQAEQLFEEIRSKGYRLNRSLYHMLMK 877
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
Y KAE LL MKE + + + LMT Y GHP++ ++ +K+SS+
Sbjct: 878 IYRDACNHSKAEQLLASMKEDGIEPTIATMHILMTSYGTAGHPDEAEKVLNSLKSSSLEV 937
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAAD---WTTFSNLASIYVEAGLFEKA 248
+ Y+ A D + + EMK DG V D WT F AS+
Sbjct: 938 STLPYSTVFNAYLKNGDYNLGITKLLEMKADG-VKPDHQVWTCFIRAASL---------C 987
Query: 249 ERALKELENRNAHRDLSAYQFLITLYGQ--TGNLSEVYRIWRSLRLAFPNTANISYLNMI 306
ER + N+ RD + I L + + L+EV L A ++A ++++N +
Sbjct: 988 ERTADAILLLNSLRDCE-FDLPIRLLTERTSSLLTEVSNFLEELD-ALEDSAALNFVNAL 1045
Query: 307 QVLV 310
+ L+
Sbjct: 1046 EDLL 1049
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 65/142 (45%), Gaps = 1/142 (0%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
+N+L+ +Y++ PE+ ++ EM + P +Y + A AE++ EE++
Sbjct: 802 YNTLIVMYSRNLRPEEGFTLLNEMGKKGLTPKLESYKSLLAASGKAKLWEQAEQLFEEIR 861
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
G + + + L IY +A KAE+ L ++ ++ L+T YG G+
Sbjct: 862 SKG-YRLNRSLYHMLMKIYRDACNHSKAEQLLASMKEDGIEPTIATMHILMTSYGTAGHP 920
Query: 281 SEVYRIWRSLRLAFPNTANISY 302
E ++ SL+ + + + Y
Sbjct: 921 DEAEKVLNSLKSSSLEVSTLPY 942
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 50/286 (17%), Positives = 110/286 (38%), Gaps = 37/286 (12%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N Y S+++ C+ E ++ +M+ N+L+ +Y G+ +K +
Sbjct: 728 NMHIYRSMISLLCRNKRYRDVELMVVEMERAGFEPDLTILNTLLLMYTGNGNFDKTVEVY 787
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+ + + P+ TYN + + ++ EM + G + ++ +L + +
Sbjct: 788 HSILEAGLEPNEDTYNTLIVMYSRNLRPEEGFTLLNEMGKKG-LTPKLESYKSLLAASGK 846
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
A L+E+AE+ +E+ ++ + S Y L+ +Y N S+ ++ S++
Sbjct: 847 AKLWEQAEQLFEEIRSKGYRLNRSLYHMLMKIYRDACNHSKAEQLLASMK---------- 896
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
E G I ++++ +Y G + AE++ +
Sbjct: 897 ------------------------EDGIEP-TIATMHILMTSYGTAGHPDEAEKVLNSLK 931
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVD-CLEKAIDTGRGDGGKW 406
+ + + + YL+NGD L + LE D + D W
Sbjct: 932 SSSLEVSTLPYSTVFNAYLKNGDYNLGITKLLEMKADGVKPDHQVW 977
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 147/326 (45%), Gaps = 3/326 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
A K+ + M++ G+ V I +D + K Q +D A + F +D S + T+ SL++
Sbjct: 289 AFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLID 348
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
K+ + A + E+M + + + + + SL+ + K E + +EM S P
Sbjct: 349 GLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSP 408
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D N +M + + + EE+K G + D ++S L V+AG +
Sbjct: 409 DLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLP-DTRSYSILIHSLVKAGFARETYEL 467
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
++++ D AY +I + ++G +++ Y++ ++ + ++Y +++ L
Sbjct: 468 YYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAK 527
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+ L A F+E +S + + + +I + K GR++ A + E ++G PN T
Sbjct: 528 IDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYT 587
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAID 397
W D ++ ++ A+ C + D
Sbjct: 588 WNCLLDGLVKAEEINEALVCFQSMKD 613
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 134/322 (41%), Gaps = 8/322 (2%)
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
+++ AL +M+EL + +L+ ++++ G + +++ EMK+++ D YNV
Sbjct: 77 SDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNV 136
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
+ V + A + EMK +G V D T++++ + +A ++A +++E
Sbjct: 137 CIDCFGKVGKVDMAWKFFHEMKANGLVPDD-VTYTSMMGVLCKANRLDEAVEIFEQMEQN 195
Query: 259 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 318
AY +I YG G E Y + R + ++Y ++ L A
Sbjct: 196 RQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKA 255
Query: 319 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 378
+ F+E + A ++ N++IG K G +E A ++++ + G PN +T I D
Sbjct: 256 LRIFEEMKRD-AMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDR 314
Query: 379 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 438
+ + A E D P T + + ++ VD A E +
Sbjct: 315 LCKAQKLDEACSIFEGM------DYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLD 368
Query: 439 AVDDLGVEVFEPLIRTYAAAGR 460
A V V+ LIR + R
Sbjct: 369 ADQIPNVVVYTSLIRNFFKCDR 390
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 139/315 (44%), Gaps = 11/315 (3%)
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 187
+L+ + +E + A +LL++MK + +N + + K G + EMKA+
Sbjct: 101 TLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKAN 160
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
++PD TY M L N + A + E+M+++ +V + ++ + Y AG F++
Sbjct: 161 GLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAY-AYNTMIMGYGSAGKFDE 219
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL-RLAFPNTANISYLNMI 306
A L+ + + AY ++T G+ G + RI+ + R A PN +Y +I
Sbjct: 220 AYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAMPNLP--TYNIII 277
Query: 307 QVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD 366
+L ++ A K + ++R N+MI K +L+ A + E +
Sbjct: 278 GMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCS 337
Query: 367 PNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH-FEQEKD 425
P+ T+ D + G + A E+ +D + +P+ + +R+ F+ ++
Sbjct: 338 PDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQ------IPNVVVYTSLIRNFFKCDRK 391
Query: 426 VDGAEGFLEILKKAV 440
DG + + E+++
Sbjct: 392 EDGHKMYKEMMRSGC 406
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 141/348 (40%), Gaps = 41/348 (11%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
AL L + M+ + + + +D KV +D A +F ++ + +TY S++
Sbjct: 115 ALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMG 174
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK ++A + E+M++ + +N+++ Y G ++ ++++ +A +P
Sbjct: 175 VLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIP 234
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRD------------------GRVAADWTT-- 231
YN + L A R+ EEMKRD G V A +
Sbjct: 235 SVVAYNCILTCLGKKGKTDKALRIFEEMKRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRD 294
Query: 232 -------FSNLASIYVEAGLFEKAER------ALKELENRNAHRDLSAYQFLITLYGQTG 278
F N+ +I + KA++ + ++ + D + + LI G+ G
Sbjct: 295 AMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQG 354
Query: 279 NLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPGAEKCFKE-WESGCATYDIR 335
+ + YRI+ + A PN + Y ++I+ K +KE SGC+ D+
Sbjct: 355 RVDDAYRIYERMLDADQIPNV--VVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSP-DLM 411
Query: 336 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
+ N + K G E L E + RG P+ +++ I ++ G
Sbjct: 412 LLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAG 459
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 114/274 (41%), Gaps = 8/274 (2%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y ++++ +CK KA LLE+MK + + + + S++ AK ++ + +E K
Sbjct: 483 YNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAK 542
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
++ I + Y+ + V + A V+EEM + G + + T++ L V+A
Sbjct: 543 SNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKG-LTPNVYTWNCLLDGLVKAEEI 601
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
+A + +++ + Y LI + ++ + W+ ++ I+Y M
Sbjct: 602 NEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAM 661
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
I L ++ A F+ + + D N MI + R +A +L E R +G
Sbjct: 662 ISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGC 721
Query: 366 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ KT D + +CLE+A G
Sbjct: 722 SIHTKTCVALLDALHK-------AECLEQAAIVG 748
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 74/147 (50%), Gaps = 2/147 (1%)
Query: 79 ENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKE 136
E M ++G+ V LD + K + I+ A F + + + N +TY L+N CK
Sbjct: 574 EEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKV 633
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 196
KA ++M++ L +++ + ++++ AK+G+ + ++ + +AS +PDS +Y
Sbjct: 634 RKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASY 693
Query: 197 NVWMRALAAVNDISGAERVIEEMKRDG 223
N + L+ N A ++ EE + G
Sbjct: 694 NAMIEGLSIANRALDAYQLFEETRLKG 720
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 78/193 (40%), Gaps = 1/193 (0%)
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
++Q M+ P Y + AL+ V + + +M+ G + + L ++
Sbjct: 48 LLQMMRHFKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQELG-YEVNVHLLTTLIRVF 106
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
G + A L E+++ D+ Y I +G+ G + ++ + ++ +
Sbjct: 107 SREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDD 166
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
++Y +M+ VL L A + F++ E N MI Y G+ + A L ER
Sbjct: 167 VTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLER 226
Query: 360 ARRRGADPNAKTW 372
R +G P+ +
Sbjct: 227 QRAKGCIPSVVAY 239
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 92/221 (41%), Gaps = 3/221 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK--NHLTYGSLLN 131
A +L E M+ G + TV +D +AK+ +D A F + N + Y SL++
Sbjct: 499 AYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLID 558
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ K ++A ++E+M + L + +N L+ K + Q MK P
Sbjct: 559 GFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTP 618
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ TY + + L V + A +EM++ G + + T++ + S ++G +A
Sbjct: 619 NQITYCILINGLCKVRKFNKAFVFWQEMQKQG-LKPNTITYTAMISGLAKSGNVAQASSL 677
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL 292
+ D ++Y +I + Y+++ RL
Sbjct: 678 FERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRL 718
>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 794
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 141/337 (41%), Gaps = 11/337 (3%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TYG+++N +CK+ E + LL +M E L S +N+++ K G + + M
Sbjct: 244 TYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWM 303
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
S PD TYN+ + + ++ AE+++E+ + G + + +++ L Y + G
Sbjct: 304 IKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRG-LLPNKVSYTPLIHNYCKQGE 362
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISY 302
+ +A L ++ R DL Y LI G + + + + P+ ANI Y
Sbjct: 363 YLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPD-ANI-Y 420
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
++ L LP A+ E D +T ++ + + G E A++L E
Sbjct: 421 NVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIE 480
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ 422
+G DP + Y + G MK A+ C ++ I G P T T + + +
Sbjct: 481 KGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQ------GLHSPDEFTYSTIIDGYIK 534
Query: 423 EKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
D+ GA ++ K V + LI + +G
Sbjct: 535 MNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSG 571
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 111/297 (37%), Gaps = 41/297 (13%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N ++Y L++ YCK+ +A LL KM E + + +L+ G + +
Sbjct: 346 NKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVR 405
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+M ++PD+ YNV M L + A+ ++ EM D VA D + L ++
Sbjct: 406 NKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEM-LDQNVAPDAFITATLVDGFIR 464
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G FE+A++ + + + Y +I Y + G + + ++ + + +
Sbjct: 465 HGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFT 524
Query: 302 YLNMIQVLVNLKDLPGA-----------------------------------EKCFKEWE 326
Y +I + + DL GA EK FK+
Sbjct: 525 YSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQML 584
Query: 327 SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
S ++ ++IG + K L A E+ PN T+ YL NG
Sbjct: 585 SLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYN-----YLMNG 636
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 106/266 (39%), Gaps = 5/266 (1%)
Query: 125 TYGSLL--NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQ 182
TY L+ +C C E+ KAE LLE+ + L + + + L+ Y K G + ++
Sbjct: 314 TYNILITGSCSCGEV--HKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLI 371
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
+M PD TY + L ++ A V +M G V D ++ L S +
Sbjct: 372 KMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKG-VLPDANIYNVLMSGLCKK 430
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY 302
G A+ L E+ ++N D L+ + + G+ E +++ + + Y
Sbjct: 431 GRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGY 490
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
MI+ + A CFK G + D + +I Y K L A + +
Sbjct: 491 NAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVK 550
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLA 388
PN T+ + + + +GD+ A
Sbjct: 551 GACKPNVVTYTLLINGFCLSGDINRA 576
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 102/248 (41%), Gaps = 19/248 (7%)
Query: 162 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 221
NSL+ + K G E + EM + D+YT + ++ L + ++IE KR
Sbjct: 141 NSLLNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIE--KR 198
Query: 222 DGRVAADWTTFSN-LASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
GR F N L Y + G E+A KEL+ + + Y +I + + G
Sbjct: 199 WGRGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKF 258
Query: 281 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE------W--ESGCATY 332
V ++ + ++S I + N+ D C E W +SGC
Sbjct: 259 EVVDKLLVEMS---ERGLDVS----IHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDP- 310
Query: 333 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 392
D+ N++I G + AE+L E+A +RG PN ++ Y + G+ A+D L
Sbjct: 311 DMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLL 370
Query: 393 EKAIDTGR 400
K + G
Sbjct: 371 IKMSERGH 378
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 66/147 (44%), Gaps = 5/147 (3%)
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS---EVYRIWRSLRLAFPNTANIS 301
F + E LK +++++ A+ +I+++ G + E YR + + P+ + +
Sbjct: 82 FSEVESLLKIMKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCN 141
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
+++ VLV + A K + E D +M+ KEG++E+ +L E+
Sbjct: 142 --SLLNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRW 199
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLA 388
RG PN + D Y + GD + A
Sbjct: 200 GRGCMPNIVFYNTLIDGYCKKGDTERA 226
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 56/287 (19%), Positives = 110/287 (38%), Gaps = 12/287 (4%)
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
++ ++++ MK+ +MP +++ + A + A + D + ++L
Sbjct: 84 EVESLLKIMKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSL 143
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW--RSLRLA 293
++ V+ G E A + E+ +RN D ++ + G + + +++ R R
Sbjct: 144 LNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGC 203
Query: 294 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
PN + Y +I D A FKE + ++ +I + K+G+ E
Sbjct: 204 MPNI--VFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVV 261
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETI 413
++L RG D + + D ++G A D + I +G P T
Sbjct: 262 DKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCD------PDMATY 315
Query: 414 RTFMRHFEQEKDVDGAEGFLE-ILKKAVDDLGVEVFEPLIRTYAAAG 459
+ +V AE LE +K+ + V + PLI Y G
Sbjct: 316 NILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVS-YTPLIHNYCKQG 361
>gi|222635128|gb|EEE65260.1| hypothetical protein OsJ_20463 [Oryza sativa Japonica Group]
Length = 1443
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 120/265 (45%), Gaps = 3/265 (1%)
Query: 124 LTYGSLLNCYCKE--LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+++ +L+N K L A LL ++++ L ++ +N+L++ ++ + + A+
Sbjct: 257 VSFNTLINARAKSGCLAAGVALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVF 316
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+EM AS PD +TYN + AE + +E+ G D T+++L + +
Sbjct: 317 EEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKG-FQPDAVTYNSLLYAFAK 375
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G E+ ER +EL +D Y +I +YG+ G L ++ +R ++
Sbjct: 376 EGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVT 435
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y ++ L + + A K +E + + +I AYAK GR ++AE +R
Sbjct: 436 YTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMV 495
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMK 386
G P+ + + D + R+ + +
Sbjct: 496 ESGVKPDRLAYLVMLDVFARSDETR 520
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 127/293 (43%), Gaps = 3/293 (1%)
Query: 109 AENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLY 168
AE+ F+ + +++ Y + + A LL+ M++ ++ + FN+L+
Sbjct: 207 AEDVFLRFAREGATVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINAR 266
Query: 169 AKTGHPEKIPA--IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA 226
AK+G A ++ E++ + + PD+ TYN + A + +++ A V EEM
Sbjct: 267 AKSGCLAAGVALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIA-SECR 325
Query: 227 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
D T++ + S++ G ++AE KEL + D Y L+ + + G++ V R+
Sbjct: 326 PDLWTYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERV 385
Query: 287 WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAK 346
L A I+Y MI + + L A + E + T D V++ + K
Sbjct: 386 CEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGK 445
Query: 347 EGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
R+ A ++ E G P T+ Y ++G A ++ +++G
Sbjct: 446 MDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESG 498
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 6/163 (3%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK--NHLTYGSLLNCYCKELM 138
M KRG+ + I L K + + A+ F ++ N Y ++ Y
Sbjct: 983 MGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARN 1042
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
KAE LL MKE + + + LMT Y +GHP++ ++ +K+S++ + Y+
Sbjct: 1043 HSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYST 1102
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAAD---WTTFSNLASI 238
+ A D S + EMKRDG V D WT+F AS+
Sbjct: 1103 VLDAYLRNRDYSLGITKLLEMKRDG-VEPDHQVWTSFIRAASL 1144
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 110/273 (40%), Gaps = 40/273 (14%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
K+ +TY ++++ Y KM L+L +
Sbjct: 396 KDGITYNTMIHMY-------------GKMGRLDLAL----------------------GL 420
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
EM+A PD+ TY V + +L ++ IS A +V+EEM D + TFS L Y
Sbjct: 421 YDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMA-DAGLKPTLVTFSALICAYA 479
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
++G + AER + D AY ++ ++ ++ ++ ++R++ +
Sbjct: 480 KSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGYKPDDG 539
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
Y ++ L + E ++ E+ + +++++I A + L +RA
Sbjct: 540 LYQVLLAALAKGNEHDEIEGVIQDMEAVFEMNPLVISSILIKAEC----ISQGASLLKRA 595
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
+G +P+ K+ D Y + G + + LE
Sbjct: 596 CLQGYEPDGKSLLSILDAYEKMGKHEKGLSLLE 628
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 67/340 (19%), Positives = 127/340 (37%), Gaps = 44/340 (12%)
Query: 145 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 204
+++++++L++ S ++ +AK G ++ I MKA+ +P+ + Y + + L
Sbjct: 839 VVQELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLC 898
Query: 205 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 264
E ++ EM+ G D + L +Y G F++ + D
Sbjct: 899 HNKRFRDVELMVAEMEGAG-FKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDE 957
Query: 265 SAYQFLITLY-------------------GQTGNLSEVYRI----------WRSLRLAFP 295
Y LI +Y G T L E Y+I W L F
Sbjct: 958 DTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKL-ESYKILLAASGKAKLWEQADLLFE 1016
Query: 296 NTANISY-LN------MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEG 348
Y LN M+++ N ++ AE + I ++++ +Y G
Sbjct: 1017 EMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSG 1076
Query: 349 RLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVP 408
+ AE++ + + + + D YLRN D L + K ++ R DG + P
Sbjct: 1077 HPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGI---TKLLEMKR-DGVE--P 1130
Query: 409 SSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVF 448
+ +F+R + D A L+ L+ DL + +
Sbjct: 1131 DHQVWTSFIRAASLCEQTDDAILLLKSLQDCGFDLPIRLL 1170
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 63/150 (42%), Gaps = 1/150 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY +L+ Y + E+ LL +M + L + L+ K E+ + +EM
Sbjct: 959 TYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEM 1018
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ + Y++ M+ + S AE ++ MK DG + T L + Y +G
Sbjct: 1019 RTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDG-IEPTIATMHILMTSYGTSGH 1077
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLY 274
++AE+ L L++ N Y ++ Y
Sbjct: 1078 PDEAEKVLNSLKSSNLEISTLPYSTVLDAY 1107
>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 711
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 158/395 (40%), Gaps = 18/395 (4%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
A L M ++G V ++ + K + +D AE + + N +TY S+++
Sbjct: 135 ACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIH 194
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
Y E+A + +M L + +NS M K G ++ I M A P
Sbjct: 195 GYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRP 254
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ TY + + A + MK DG + A+ F+ L Y + G+ ++A
Sbjct: 255 NIVTYGILLHGYATEGCFADMMSFFNTMKGDG-IVANCLVFTILIDAYAKRGMMDEAMLI 313
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
L E++ + D+ Y LI+ + G L++ + + + Y ++IQ
Sbjct: 314 LSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCT 373
Query: 312 LKDLPGA-EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
DL A E ++ +G +I N ++ + KEGR+ +A + + + G +
Sbjct: 374 HGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDII 433
Query: 371 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR-HFEQEKDVDGA 429
+ D Y G+M A L+ I G G P + T T + +F+ + DG
Sbjct: 434 MFNTLIDGYCLVGEMGKAFSVLDAMISAGIG------PDTFTYNTLVNGYFKSGRIDDGL 487
Query: 430 EGFLEILKKAVDDLGVE---VFEPLIRTYAAAGRT 461
F E+ K + V + + L R AGRT
Sbjct: 488 NLFREMSDKKIKPTTVTYNIILDGLFR----AGRT 518
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 133/329 (40%), Gaps = 4/329 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAK-VQGIDAAENYFVDLPETSK-NHLTYGSLLN 131
A K+ M RG+ + +D + K + +AAE ++ + + N +TYG LL+
Sbjct: 205 ATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLH 264
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
Y E + MK + + + F L+ YAK G ++ I+ EM+ + P
Sbjct: 265 GYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSP 324
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D +TY+ + AL + ++ A +M G V + + +L + G KA+
Sbjct: 325 DVFTYSTLISALCRMGRLADAVDKFNQMIGTG-VQPNTVVYHSLIQGFCTHGDLVKAKEL 383
Query: 252 LKELENRNAHR-DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
+ E+ N R +++ + ++ + G + + + I+ ++ + I + +I
Sbjct: 384 VYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYC 443
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
+ ++ A S D N ++ Y K GR+++ L + P
Sbjct: 444 LVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTV 503
Query: 371 TWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
T+ I D R G A L + I G
Sbjct: 504 TYNIILDGLFRAGRTVAAQKMLHEMIGCG 532
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 98/246 (39%), Gaps = 3/246 (1%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
+ S+++ CKE A + + +K++ + FN+L+ Y G K +++ M
Sbjct: 400 FNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMI 459
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
++ I PD++TYN + I + EM D ++ T++ + AG
Sbjct: 460 SAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMS-DKKIKPTTVTYNIILDGLFRAGRT 518
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN- 304
A++ L E+ L Y ++ + E +++ L NI+ LN
Sbjct: 519 VAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKL-CTMNVKFNITTLNT 577
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
MI + ++ A+ F + +MI KEG +E A+ + + G
Sbjct: 578 MINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSG 637
Query: 365 ADPNAK 370
P ++
Sbjct: 638 CAPCSR 643
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 100/262 (38%), Gaps = 2/262 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE-KIPAIIQ 182
TYG ++N C+ E A ++ L N+++ T + + +++
Sbjct: 9 FTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKVLLR 68
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYVE 241
M +PD+++Y + ++ L N A ++ M K +G + D T++ + + +
Sbjct: 69 RMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFK 128
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G KA E+ + D+ + +I + + + R + ++
Sbjct: 129 EGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVT 188
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +MI L A K F+E DI N + + K GR + A E+
Sbjct: 189 YTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMA 248
Query: 362 RRGADPNAKTWEIFSDYYLRNG 383
+G PN T+ I Y G
Sbjct: 249 AKGHRPNIVTYGILLHGYATEG 270
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 84/459 (18%), Positives = 173/459 (37%), Gaps = 60/459 (13%)
Query: 7 FGRTKNIAKRSKK-HLEEALYDRLFKKG-SSDVSVRQQLNQFLKSKKRVFKWEVGDTLKK 64
+G N R+++ L A + RL + G +D + + + L KR V L++
Sbjct: 11 YGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRT-DDAVKVLLRR 69
Query: 65 LRDRKLYYPALKLSENMEKRGMNKTVSDQAIHL-DLVAKVQGIDAAENYFVDLPETSKNH 123
+ + A + + KR + S QA+ L ++AK +G+ S +
Sbjct: 70 MTELGCVPDAFSYAIVL-KRLCDDNRSQQALDLLRMMAKEEGV------------CSPDV 116
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY ++++ + KE KA L +M + + NS++ K + ++++
Sbjct: 117 VTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQ 176
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + + P+ TY + + + A ++ EM G + D ++++ + G
Sbjct: 177 MVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLI-PDIVSWNSFMDSLCKHG 235
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
++A + + ++ Y L+ Y G +++ ++F NT
Sbjct: 236 RSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADM--------MSFFNT------ 281
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+K C V ++I AYAK G ++ A + + +
Sbjct: 282 --------MKGDGIVANCL-------------VFTILIDAYAKRGMMDEAMLILSEMQGQ 320
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQE 423
G P+ T+ R G + AVD + I TG P++ + ++ F
Sbjct: 321 GLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTG------VQPNTVVYHSLIQGFCTH 374
Query: 424 KD-VDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 461
D V E E++ + + F ++ + GR
Sbjct: 375 GDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRV 413
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/99 (20%), Positives = 47/99 (47%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY +L C+ T++A + +K+ +N+ F+ N+++ E+ + +
Sbjct: 539 TYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAI 598
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
S ++P++ TY + +R L + A+ + M++ G
Sbjct: 599 SDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSG 637
>gi|326528911|dbj|BAJ97477.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 913
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/389 (19%), Positives = 152/389 (39%), Gaps = 44/389 (11%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLN 131
AL +E M+ G+ T+ +I + K+ +A+N F + N + Y ++++
Sbjct: 331 ALSCTEEMKAEGIELTIVTYSILISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIH 390
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C+ ++AE L+ +M+E + ++S+M Y +K + + +K P
Sbjct: 391 AHCQSGNMDRAEELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTP 450
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+Y + + ++ A + +EM+ G + + T+S L S ++ F A R
Sbjct: 451 SIISYGCLINLYVKIGKVAKAIAISKEMESSG-IKHNNKTYSMLISGFIHLHDFTNAFRI 509
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
+E+ D + Y LI + + GN+ RI ++ +N ++ +I+
Sbjct: 510 FEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIE---- 565
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+A G ++ A ++ + RR G P T
Sbjct: 566 -------------------------------GFAVAGDMKRALDILDLMRRSGCAPTVMT 594
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG 431
+ +R ++ AV L K G P+ T MR + D+ A
Sbjct: 595 YNALIHGLIRKNQVERAVSVLNKMSIAG------ITPNEHTYTIIMRGYAATGDIAKAFE 648
Query: 432 FLEILKKAVDDLGVEVFEPLIRTYAAAGR 460
+ +K+ L V ++E L+R +GR
Sbjct: 649 YFTKIKEGGLKLDVYIYETLLRACCKSGR 677
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/347 (20%), Positives = 146/347 (42%), Gaps = 11/347 (3%)
Query: 108 AAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTL 167
A + F +P+ S+ +G ++ Y K A A E M+ + ++ F SL+
Sbjct: 264 AVVSAFERIPKPSRRE--FGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHA 321
Query: 168 YAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRD-GRVA 226
YA + +EMKA I TY++ + +ND A+ + +E K + G +
Sbjct: 322 YAVARDMRGALSCTEEMKAEGIELTIVTYSILISGFGKINDTQSADNLFKEAKTNLGDL- 380
Query: 227 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
+ +SN+ + ++G ++AE + E+E + AY ++ Y + + +
Sbjct: 381 -NGIIYSNIIHAHCQSGNMDRAEELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIV 439
Query: 287 WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAK 346
+ L+ + ISY +I + V + + A KE ES ++ + +++I +
Sbjct: 440 FERLKECCFTPSIISYGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIH 499
Query: 347 EGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKW 406
NA + E + G P+ + + + + + G+M A+ LEK +
Sbjct: 500 LHDFTNAFRIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKM------QKERM 553
Query: 407 VPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIR 453
PS+ R + F D+ A L++++++ V + LI
Sbjct: 554 QPSNRAFRPIIEGFAVAGDMKRALDILDLMRRSGCAPTVMTYNALIH 600
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 118/299 (39%), Gaps = 7/299 (2%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
F ++ YAK G A + M+A I P+++ + + A A D+ GA EEMK
Sbjct: 280 FGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCTEEMK 339
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
+G + T+S L S + + + A+ KE + + Y +I + Q+GN+
Sbjct: 340 AEG-IELTIVTYSILISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHCQSGNM 398
Query: 281 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 340
+ + + +Y +M+ ++D F+ + C T I +
Sbjct: 399 DRAEELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCL 458
Query: 341 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 400
I Y K G++ A + + G N KT+ + ++ D A E+ + +G
Sbjct: 459 INLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSG- 517
Query: 401 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
P + F + ++D A LE ++K F P+I +A AG
Sbjct: 518 -----LQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAG 571
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/278 (18%), Positives = 118/278 (42%), Gaps = 1/278 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N+ TY L++ + A + E+M + L +N L+ + K G+ ++ I+
Sbjct: 486 NNKTYSMLISGFIHLHDFTNAFRIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRIL 545
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
++M+ + P + + + A D+ A +++ M+R G A T++ L +
Sbjct: 546 EKMQKERMQPSNRAFRPIIEGFAVAGDMKRALDILDLMRRSG-CAPTVMTYNALIHGLIR 604
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
E+A L ++ + Y ++ Y TG++++ + + ++
Sbjct: 605 KNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYI 664
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +++ + A +E S + V N++I +A+ G + A +L ++ +
Sbjct: 665 YETLLRACCKSGRMQSALAVTREMSSQKIARNTFVYNILIDGWARRGDVWEAADLMKQMK 724
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
G PN T+ + + + GDM+ A +++ D G
Sbjct: 725 EDGVPPNIHTYTSYINACCKAGDMQRAQTVIDEMSDVG 762
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 89/201 (44%), Gaps = 3/201 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK--NHLTYGSLLN 131
A+ + M G+ I + A I A YF + E + Y +LL
Sbjct: 611 AVSVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETLLR 670
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK + A A+ +M + ++ +N L+ +A+ G + ++++MK + P
Sbjct: 671 ACCKSGRMQSALAVTREMSSQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPP 730
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ +TY ++ A D+ A+ VI+EM G + + T++ L + A L ++A +
Sbjct: 731 NIHTYTSYINACCKAGDMQRAQTVIDEMSDVG-LKPNLKTYTTLIKGWARASLPDRALKC 789
Query: 252 LKELENRNAHRDLSAYQFLIT 272
+E++ D +AY L+T
Sbjct: 790 FEEMKLAGLKPDEAAYHCLVT 810
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/238 (18%), Positives = 101/238 (42%), Gaps = 5/238 (2%)
Query: 140 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 199
++A +L+ M+ + M +N+L+ + E+ +++ +M + I P+ +TY +
Sbjct: 574 KRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTII 633
Query: 200 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 259
MR AA DI+ A ++K +G + D + L ++G + A +E+ ++
Sbjct: 634 MRGYAATGDIAKAFEYFTKIK-EGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQK 692
Query: 260 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR--LAFPNTANISYLNMIQVLVNLKDLPG 317
R+ Y LI + + G++ E + + ++ PN +Y + I D+
Sbjct: 693 IARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIH--TYTSYINACCKAGDMQR 750
Query: 318 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 375
A+ E +++ +I +A+ + A + E + G P+ +
Sbjct: 751 AQTVIDEMSDVGLKPNLKTYTTLIKGWARASLPDRALKCFEEMKLAGLKPDEAAYHCL 808
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N TY S +N CK ++A+ ++++M ++ L + + +L+ +A+ P++
Sbjct: 731 NIHTYTSYINACCKAGDMQRAQTVIDEMSDVGLKPNLKTYTTLIKGWARASLPDRALKCF 790
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDI------SGAERVIEEM-----KRDGRVAADWT 230
+EMK + + PD Y+ + +L + + +G V EM D R A W+
Sbjct: 791 EEMKLAGLKPDEAAYHCLVTSLLSRATVMEGSTYTGILSVCREMFENDLTVDMRTAVHWS 850
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 128/292 (43%), Gaps = 4/292 (1%)
Query: 104 QGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPF 161
+G DA E F ++ E + NH+TY ++++ + K E L ++M L +++ +
Sbjct: 215 RGGDAVE-VFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITY 273
Query: 162 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 221
N L++ + G + A++ EM + ++PD +TY++ L+ D + + +
Sbjct: 274 NVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLK 333
Query: 222 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 281
+G D+T S L + + G AE L+ L N Y LI Y QTG L
Sbjct: 334 NGVTIGDYTC-SILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELE 392
Query: 282 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 341
+ + ++ +I+Y +I L + + A+ E + + N +I
Sbjct: 393 GAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLI 452
Query: 342 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
AY + G+LE + + G PN ++ + + +NG + AV L+
Sbjct: 453 DAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILD 504
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 116/277 (41%), Gaps = 10/277 (3%)
Query: 121 KNHLTYGS-----LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
KN +T G LLN CK+ AE +L+ + L + + +N+L+ Y +TG E
Sbjct: 333 KNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELE 392
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
+ +MK+ I PD TYN + L I+ A+ ++ EM+ +G V TF+ L
Sbjct: 393 GAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNG-VNPTVETFNTL 451
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLA 293
Y G EK L E++ ++ +Y ++ + + G + E I + +
Sbjct: 452 IDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDV 511
Query: 294 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
PN Y +I V A ++ +S + I N++I + ++ A
Sbjct: 512 LPNAQ--VYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEA 569
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
EE+ P+A ++ G++ A+D
Sbjct: 570 EEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALD 606
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 105/215 (48%), Gaps = 9/215 (4%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHL-----TYGSLLNCYCK 135
M+ G+N TV +D + + E F+ L E +N L +YGS++N +CK
Sbjct: 436 MQDNGVNPTVETFNTLIDAYGRTGQL---EKCFIVLSEMQENGLKPNVVSYGSIVNAFCK 492
Query: 136 ELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYT 195
+A A+L+ M ++ ++ +N+++ Y + G ++ ++++MK++ I P T
Sbjct: 493 NGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVT 552
Query: 196 YNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 255
YN+ ++ L + IS AE +I + + R+ D +++ L S G +KA + +
Sbjct: 553 YNLLIKGLCNQSQISEAEEIINSLS-NHRLIPDAVSYNTLISACCYRGNIDKALDLQQRM 611
Query: 256 ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
+ Y LI+ G G L+E+ +++ +
Sbjct: 612 HKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKM 646
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 116/267 (43%), Gaps = 9/267 (3%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+H+TY +L+N CK A+ LL +M++ + + FN+L+ Y +TG EK ++
Sbjct: 409 DHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVL 468
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYV 240
EM+ + + P+ +Y + A I A ++++M +D V + ++ + YV
Sbjct: 469 SEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKD--VLPNAQVYNAIIDAYV 526
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL---RLAFPNT 297
E G ++A ++++++ + Y LI +SE I SL RL P+
Sbjct: 527 EHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRL-IPDA 585
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
+SY +I ++ A + +R + +I GRL E L
Sbjct: 586 --VSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLY 643
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGD 384
++ + P+ I + Y + G+
Sbjct: 644 QKMMQNNVVPSNAIHNIMVEAYSKYGN 670
>gi|115466932|ref|NP_001057065.1| Os06g0199100 [Oryza sativa Japonica Group]
gi|51091829|dbj|BAD36643.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113595105|dbj|BAF18979.1| Os06g0199100 [Oryza sativa Japonica Group]
Length = 1283
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 120/265 (45%), Gaps = 3/265 (1%)
Query: 124 LTYGSLLNCYCKE--LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+++ +L+N K L A LL ++++ L ++ +N+L++ ++ + + A+
Sbjct: 97 VSFNTLINARAKSGCLAAGVALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVF 156
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+EM AS PD +TYN + AE + +E+ G D T+++L + +
Sbjct: 157 EEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKG-FQPDAVTYNSLLYAFAK 215
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G E+ ER +EL +D Y +I +YG+ G L ++ +R ++
Sbjct: 216 EGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVT 275
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y ++ L + + A K +E + + +I AYAK GR ++AE +R
Sbjct: 276 YTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMV 335
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMK 386
G P+ + + D + R+ + +
Sbjct: 336 ESGVKPDRLAYLVMLDVFARSDETR 360
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 125/289 (43%), Gaps = 7/289 (2%)
Query: 113 FVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTG 172
F LP + +++ Y + + A LL+ M++ ++ + FN+L+ AK+G
Sbjct: 55 FPHLPTVQ----VFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSG 110
Query: 173 HPEKIPA--IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWT 230
A ++ E++ + + PD+ TYN + A + +++ A V EEM D
Sbjct: 111 CLAAGVALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIA-SECRPDLW 169
Query: 231 TFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
T++ + S++ G ++AE KEL + D Y L+ + + G++ V R+ L
Sbjct: 170 TYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEEL 229
Query: 291 RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRL 350
A I+Y MI + + L A + E + T D V++ + K R+
Sbjct: 230 VKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRI 289
Query: 351 ENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
A ++ E G P T+ Y ++G A ++ +++G
Sbjct: 290 SEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESG 338
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 111/253 (43%), Gaps = 7/253 (2%)
Query: 153 NLGFSSMP----FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVND 208
+L F +P FN++M +YA++G + ++ M+ I PD ++N + A A
Sbjct: 52 HLRFPHLPTVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGC 111
Query: 209 ISG--AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSA 266
++ A ++ E+++ G + D T++ L S + + A +E+ DL
Sbjct: 112 LAAGVALELLHEVRQAG-LRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWT 170
Query: 267 YQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE 326
Y +++++G+ G E +++ L ++Y +++ D+ E+ +E
Sbjct: 171 YNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELV 230
Query: 327 SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 386
D N MI Y K GRL+ A L + R G P+A T+ + D + +
Sbjct: 231 KAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRIS 290
Query: 387 LAVDCLEKAIDTG 399
A LE+ D G
Sbjct: 291 EAGKVLEEMADAG 303
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 6/163 (3%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK--NHLTYGSLLNCYCKELM 138
M KRG+ + I L K + + A+ F ++ N Y ++ Y
Sbjct: 823 MGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARN 882
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
KAE LL MKE + + + LMT Y +GHP++ ++ +K+S++ + Y+
Sbjct: 883 HSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYST 942
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAAD---WTTFSNLASI 238
+ A D S + EMKRDG V D WT+F AS+
Sbjct: 943 VLDAYLRNRDYSLGITKLLEMKRDG-VEPDHQVWTSFIRAASL 984
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 110/273 (40%), Gaps = 40/273 (14%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
K+ +TY ++++ Y KM L+L +
Sbjct: 236 KDGITYNTMIHMY-------------GKMGRLDLAL----------------------GL 260
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
EM+A PD+ TY V + +L ++ IS A +V+EEM D + TFS L Y
Sbjct: 261 YDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMA-DAGLKPTLVTFSALICAYA 319
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
++G + AER + D AY ++ ++ ++ ++ ++R++ +
Sbjct: 320 KSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGYKPDDG 379
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
Y ++ L + E ++ E+ + +++++I A + L +RA
Sbjct: 380 LYQVLLAALAKGNEHDEIEGVIQDMEAVFEMNPLVISSILIKAEC----ISQGASLLKRA 435
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
+G +P+ K+ D Y + G + + LE
Sbjct: 436 CLQGYEPDGKSLLSILDAYEKMGKHEKGLSLLE 468
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 67/341 (19%), Positives = 127/341 (37%), Gaps = 44/341 (12%)
Query: 144 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 203
+++++++L++ S ++ +AK G ++ I MKA+ +P+ + Y + + L
Sbjct: 678 VVVQELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLL 737
Query: 204 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 263
E ++ EM+ G D + L +Y G F++ + D
Sbjct: 738 CHNKRFRDVELMVAEMEGAG-FKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPD 796
Query: 264 LSAYQFLITLY-------------------GQTGNLSEVYRI----------WRSLRLAF 294
Y LI +Y G T L E Y+I W L F
Sbjct: 797 EDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKL-ESYKILLAASGKAKLWEQADLLF 855
Query: 295 PNTANISY-LN------MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKE 347
Y LN M+++ N ++ AE + I ++++ +Y
Sbjct: 856 EEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTS 915
Query: 348 GRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWV 407
G + AE++ + + + + D YLRN D L + K ++ R DG +
Sbjct: 916 GHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGI---TKLLEMKR-DGVE-- 969
Query: 408 PSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVF 448
P + +F+R + D A L+ L+ DL + +
Sbjct: 970 PDHQVWTSFIRAASLCEQTDDAILLLKSLQDCGFDLPIRLL 1010
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 63/150 (42%), Gaps = 1/150 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY +L+ Y + E+ LL +M + L + L+ K E+ + +EM
Sbjct: 799 TYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEM 858
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ + Y++ M+ + S AE ++ MK DG + T L + Y +G
Sbjct: 859 RTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDG-IEPTIATMHILMTSYGTSGH 917
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLY 274
++AE+ L L++ N Y ++ Y
Sbjct: 918 PDEAEKVLNSLKSSNLEISTLPYSTVLDAY 947
>gi|302784330|ref|XP_002973937.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
gi|300158269|gb|EFJ24892.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
Length = 823
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 137/313 (43%), Gaps = 4/313 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAK-VQGIDAAENYFVDLP--ETSKNHLTYGSLL 130
+ L E M++ G + LDL K D ++ F ++ E S + TY +++
Sbjct: 232 GITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMI 291
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
+ ++A L ++MKE + + +N+L+ +Y K G ++ ++ EM+A+ I
Sbjct: 292 TACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEMEAAGIS 351
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
P+ TYN + A A A + + + G + D T+ L S + A +EKA
Sbjct: 352 PNIVTYNELIAAYARAGLCDEAAALKKSLLSKG-LCPDEFTYCTLISAFNRAERYEKALE 410
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
E+ N ++ Y LI +YG+ L ++ ++++ ++ +++ ++++
Sbjct: 411 TFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFG 470
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
N L F+E + + N++I Y + G ++ + ++ + R G P
Sbjct: 471 NCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVP 530
Query: 371 TWEIFSDYYLRNG 383
T+ R G
Sbjct: 531 TFAALMASLAREG 543
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 109/260 (41%), Gaps = 2/260 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
T+ +L+ +E ++ E + ++M E L S L+ YA +G ++ I E+
Sbjct: 531 TFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDEL 590
Query: 185 KASSIMPDS-YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
+ S+ P S ++ A + A+ + ++ +G + D F+ + S+ + G
Sbjct: 591 EKSAKQPLSGILCKTFVLAYCKCGMDNEAQLALNQLYDNGH-SPDIKVFNAMISMCAKRG 649
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
E+A + L+E+ D Y L+++YG+ G + + +R A I+Y
Sbjct: 650 WIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYYKAEEVMSEMRRAGKAPNLITYN 709
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
++ + A + F + + D N ++G+Y+ G + A + E
Sbjct: 710 TLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEH 769
Query: 364 GADPNAKTWEIFSDYYLRNG 383
G P T++ D Y RN
Sbjct: 770 GCQPTQITFKALLDGYNRNA 789
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 116/298 (38%), Gaps = 37/298 (12%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ TY +L++ + + EKA +M++ N + + +N L+ +Y + + + +
Sbjct: 388 DEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVF 447
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+ M+ + PD T+N +++ ++ V EMKR G + TF+ L Y
Sbjct: 448 KFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPG-VDTFNILIECYGR 506
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWR-----SLRLAFPN 296
G + + K L + + L+ + G + ++ + L+L+
Sbjct: 507 CGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDAC 566
Query: 297 TANI--SYLNMIQVLVNLKDLPGAEKCFKEWESG--CATY-------------------- 332
A + SY N Q K + EK K+ SG C T+
Sbjct: 567 HAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCGMDNEAQLALNQL 626
Query: 333 -------DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
DI+V N MI AK G +E A +L E R+ P+ T+ Y R G
Sbjct: 627 YDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREG 684
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 72/157 (45%), Gaps = 1/157 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
+ ++++ K E+A LLE++++ L + +N LM++Y + G K ++ EM
Sbjct: 637 VFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYYKAEEVMSEM 696
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ + P+ TYN + + + A RV +M RV D TF+ L Y GL
Sbjct: 697 RRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVA-ARVRPDNFTFNTLVGSYSSLGL 755
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 281
+++A ++ + ++ L+ Y + + S
Sbjct: 756 YKEALSVIEYMTEHGCQPTQITFKALLDGYNRNASPS 792
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 53/100 (53%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY L++ Y +E M KAE ++ +M+ + + +N+L+ Y K G + + +
Sbjct: 671 VTYNCLMSMYGREGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGD 730
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
M A+ + PD++T+N + + +++ A VIE M G
Sbjct: 731 MVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHG 770
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 71/341 (20%), Positives = 119/341 (34%), Gaps = 55/341 (16%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEM 184
Y SL++ + ++ L E M+ +++ +N ++ LY K G ++I ++ QEM
Sbjct: 216 YTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEM 275
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
K I PD Y T++ + + ++
Sbjct: 276 KDLEISPDDY------------------------------------TYNTMITACIQNSH 299
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISY 302
++A R +E++ + Y L+ +YG+ G E + + A PN +
Sbjct: 300 CQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNE 359
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
L L D A K K S D +I A+ + R E A E R+
Sbjct: 360 LIAAYARAGLCDEAAALK--KSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRK 417
Query: 363 RGADPNAKTWEIFSDYYLR----NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 418
PN T+ I D Y R + MK+ EK P T + ++
Sbjct: 418 TNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEK----------NCTPDLVTWNSLLK 467
Query: 419 HFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
F + +K+A GV+ F LI Y G
Sbjct: 468 SFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCG 508
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/353 (20%), Positives = 153/353 (43%), Gaps = 13/353 (3%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+T L+N +CK+ ++A + +++ +N+L+ K GH + ++
Sbjct: 274 VTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDA 333
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYVEA 242
M + PD YTYN + L + +I A +++++M RD + + T++ + S +
Sbjct: 334 MLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRD--CSPNAVTYNAIISSLCKE 391
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY 302
++A + L ++ D+ + LI + N ++ ++ +Y
Sbjct: 392 NRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTY 451
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWE-SGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
+I L + + L A KE E +GCA ++ + N +I + K R+E AEE+ +
Sbjct: 452 NMLIDSLCSSRKLEEALNLLKEMELNGCAR-NVVIYNTLIDGFCKNKRIEEAEEIFDEME 510
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
+G ++ T+ D ++ ++ A +++ I G P T + + HF
Sbjct: 511 LQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEG------LRPDKFTYNSLLTHFC 564
Query: 422 QEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPV--MLRRLKME 472
+ D+ A ++ + + + + + LI AGR +LR ++M+
Sbjct: 565 KTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMK 617
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 100/219 (45%), Gaps = 3/219 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
A+ L E M+ +G + +D + + ++ A N ++L ++N + Y +L++
Sbjct: 432 AMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLID 491
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+CK E+AE + ++M+ + S+ +N+L+ K+ E ++ +M + P
Sbjct: 492 GFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRP 551
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D +TYN + DI A +++ M G D T++ L S +AG + A R
Sbjct: 552 DKFTYNSLLTHFCKTGDIKKAADIVQTMTSSG-CNPDIVTYATLISGLCKAGRVQVASRL 610
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
L+ ++ + AY +I + E R++R +
Sbjct: 611 LRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREM 649
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 3/199 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
AL L + ME G + V +D K + I+ AE F ++L S++ +TY +L++
Sbjct: 467 ALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLID 526
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK E A L+++M L +NSL+T + KTG +K I+Q M +S P
Sbjct: 527 GLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNP 586
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D TY + L + A R++ ++ G V + +++ E A R
Sbjct: 587 DIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHE-AMRL 645
Query: 252 LKELENRNAHRDLSAYQFL 270
+E+ +++ D Y+ +
Sbjct: 646 FREMLDKSEPPDAITYKIV 664
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 105/247 (42%), Gaps = 1/247 (0%)
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
+ S N +TY ++++ CKE ++A + + + FNSL+ + + +
Sbjct: 373 DCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSA 432
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
+ +EMK PD +TYN+ + +L + + A +++EM+ +G A + ++ L
Sbjct: 433 MDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNG-CARNVVIYNTLID 491
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
+ + E+AE E+E + RD Y LI ++ + + ++ + +
Sbjct: 492 GFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRP 551
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
+Y +++ D+ A + S DI +I K GR++ A L
Sbjct: 552 DKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLL 611
Query: 358 ERARRRG 364
+ +G
Sbjct: 612 RSIQMKG 618
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 107/231 (46%), Gaps = 9/231 (3%)
Query: 103 VQGIDAAENY--FVDLPETSK------NHLTYGSLLNCYCKELMTEKAEALLEKMKELNL 154
+QG+ + N+ +DL E K + TY L++ C E+A LL++M+
Sbjct: 420 IQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGC 479
Query: 155 GFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAER 214
+ + +N+L+ + K E+ I EM+ + DS TYN + L + A +
Sbjct: 480 ARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQ 539
Query: 215 VIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLY 274
++++M +G + D T+++L + + + G +KA ++ + + + D+ Y LI+
Sbjct: 540 LMDQMIMEG-LRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGL 598
Query: 275 GQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 325
+ G + R+ RS+++ +Y +IQ L A + F+E
Sbjct: 599 CKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREM 649
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/251 (19%), Positives = 107/251 (42%), Gaps = 2/251 (0%)
Query: 150 KELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDI 209
K+ N SS + ++ K G E + +++EMK S D + +++ +
Sbjct: 89 KQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELY 148
Query: 210 SGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQF 269
+++ M+ + R+ D ++ L ++ V+A + E A + R D+S +
Sbjct: 149 DEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNI 208
Query: 270 LITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESG 328
LI + + + + + ++ ++Q + +L GA + ++ E G
Sbjct: 209 LIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYG 268
Query: 329 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 388
C D+ V NV+I + K+GR++ A + A G P+ T+ + + G K A
Sbjct: 269 CPCTDVTV-NVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHA 327
Query: 389 VDCLEKAIDTG 399
++ ++ + G
Sbjct: 328 MEVVDAMLLGG 338
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 96/234 (41%), Gaps = 1/234 (0%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
FN L+ K +++EM + + PD T+ M+ ++ GA R+ E+M
Sbjct: 206 FNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMV 265
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
G D T + L + + + G ++A ++E + D Y L+ + G+
Sbjct: 266 EYGCPCTD-VTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHA 324
Query: 281 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 340
+ ++ L + +Y ++I L L ++ A K + S + + N +
Sbjct: 325 KHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAI 384
Query: 341 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
I + KE R++ A E+ +G P+ T+ + + K A+D E+
Sbjct: 385 ISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEE 438
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 47/247 (19%), Positives = 94/247 (38%), Gaps = 9/247 (3%)
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
+P +T + L D A RV + + + + +AG FE
Sbjct: 58 LPPDFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMR 117
Query: 250 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN-MIQV 308
R L+E++ D + + YG+ EV I + + + + + N ++ V
Sbjct: 118 RVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNV 177
Query: 309 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 368
LV+ L E +D+ N++I A K ++ A + E G P+
Sbjct: 178 LVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPD 237
Query: 369 AKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSE-TIRTFMRHFEQEKDVD 427
T+ Y+ G++ A+ E+ ++ G P ++ T+ + F ++ +D
Sbjct: 238 ETTFTTIMQGYIEGGNLDGALRIKEQMVEYG-------CPCTDVTVNVLINGFCKQGRID 290
Query: 428 GAEGFLE 434
A F++
Sbjct: 291 QALSFIQ 297
>gi|302771417|ref|XP_002969127.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
gi|300163632|gb|EFJ30243.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
Length = 646
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 135/302 (44%), Gaps = 4/302 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAK-VQGIDAAENYFVDLP--ETSKNHLTYGSLL 130
+ L E M++ G + LDL K D ++ F ++ E S + TY +++
Sbjct: 93 GITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMI 152
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
+ ++A L ++MKE + + +N+L+ +Y K G ++ ++ EM+A+ I
Sbjct: 153 TACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEMEAAGIS 212
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
P+ TYN + A A A + + + G + D T+ L S + A +EKA
Sbjct: 213 PNIVTYNELIAAYARAGLCDEAAALKKSLLSKG-LCPDEFTYCTLISAFNRAERYEKALE 271
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
E+ N ++ Y LI +YG+ L ++ ++++ ++ +++ ++++
Sbjct: 272 TFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFG 331
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
N L F+E + + N++I Y + G ++ + ++ + R G P
Sbjct: 332 NCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVP 391
Query: 371 TW 372
T+
Sbjct: 392 TF 393
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 91/206 (44%), Gaps = 4/206 (1%)
Query: 76 KLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLT---YGSLLNC 132
K+S+ M + G+ + + A + A Y +L +++K L+ + +
Sbjct: 411 KVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLA 470
Query: 133 YCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPD 192
YCK M +A+ L ++ + FN+++++ AK G E+ +++E++ + + PD
Sbjct: 471 YCKCCMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPD 530
Query: 193 SYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERAL 252
TYN M AE V+ EM+R G+ A + T++ L Y + G + A R
Sbjct: 531 GVTYNCLMSMYGREGMYHKAEEVMSEMRRAGK-APNLITYNTLLYSYTKHGRMDDAARVF 589
Query: 253 KELENRNAHRDLSAYQFLITLYGQTG 278
++ D + L+ Y G
Sbjct: 590 GDMVAARVRPDNFTFNTLVGSYSSLG 615
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 79/377 (20%), Positives = 147/377 (38%), Gaps = 49/377 (12%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ TY +L++ + + EKA +M++ N + + +N L+ +Y + + + +
Sbjct: 249 DEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVF 308
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+ M+ + PD T+N +++ ++ V EMKR G + TF+ L Y
Sbjct: 309 KFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPG-VDTFNILIECYGR 367
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWR-----SLRLAFPN 296
G + + K L + + L+ + G + ++ + L+L+
Sbjct: 368 CGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDAC 427
Query: 297 TANI--SYLNMIQVLVNLKDLPGAEKCFKEWESG--CATY-------------------- 332
A + SY N Q K + EK K+ SG C T+
Sbjct: 428 HAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCCMDNEAQLALNQL 487
Query: 333 -------DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 385
DI+V N MI AK G +E A +L E R+ P+ T+ Y R G
Sbjct: 488 YDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMY 547
Query: 386 KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDV-DGAEGFLEILKKAV--DD 442
A + + + G+ P+ T T + + + + D A F +++ V D+
Sbjct: 548 HKAEEVMSEMRRAGKA------PNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDN 601
Query: 443 LGVEVFEPLIRTYAAAG 459
F L+ +Y++ G
Sbjct: 602 F---TFNTLVGSYSSLG 615
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 107/256 (41%), Gaps = 2/256 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
T+ +L+ +E ++ E + ++M E L S L+ YA +G ++ I E+
Sbjct: 392 TFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDEL 451
Query: 185 KASSIMPDS-YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
+ S+ P S ++ A + A+ + ++ +G + D F+ + S+ + G
Sbjct: 452 EKSAKQPLSGILCKTFVLAYCKCCMDNEAQLALNQLYDNGH-SPDIKVFNAMISMCAKRG 510
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
E+A + L+E+ D Y L+++YG+ G + + +R A I+Y
Sbjct: 511 WIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYHKAEEVMSEMRRAGKAPNLITYN 570
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
++ + A + F + + D N ++G+Y+ G + A + E
Sbjct: 571 TLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEH 630
Query: 364 GADPNAKTWEIFSDYY 379
G P T++ D Y
Sbjct: 631 GCQPTQITFKALLDGY 646
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 53/100 (53%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY L++ Y +E M KAE ++ +M+ + + +N+L+ Y K G + + +
Sbjct: 532 VTYNCLMSMYGREGMYHKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGD 591
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
M A+ + PD++T+N + + +++ A VIE M G
Sbjct: 592 MVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHG 631
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 71/341 (20%), Positives = 119/341 (34%), Gaps = 55/341 (16%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEM 184
Y SL++ + ++ L E M+ +++ +N ++ LY K G ++I ++ QEM
Sbjct: 77 YTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEM 136
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
K I PD YT ++ + + ++
Sbjct: 137 KDLEISPDDYT------------------------------------YNTMITACIQNSH 160
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISY 302
++A R +E++ + Y L+ +YG+ G E + + A PN +
Sbjct: 161 CQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNE 220
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
L L D A K K S D +I A+ + R E A E R+
Sbjct: 221 LIAAYARAGLCDEAAALK--KSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRK 278
Query: 363 RGADPNAKTWEIFSDYYLR----NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 418
PN T+ I D Y R + MK+ EK P T + ++
Sbjct: 279 TNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEK----------NCTPDLVTWNSLLK 328
Query: 419 HFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
F + +K+A GV+ F LI Y G
Sbjct: 329 SFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCG 369
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 150/341 (43%), Gaps = 16/341 (4%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +T+ +L+N C+E +A ALL++M E L + + + +++ K G ++
Sbjct: 181 NVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLL 240
Query: 182 QEM-KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
++M + S I+P+ YN + L S A + EM+ + + D T++ + + +
Sbjct: 241 RKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQ-EKEIFPDIVTYNCMINGFC 299
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTA 298
+G + AE+ L+E+ R + D+ + LI + + G E ++ + R P+T
Sbjct: 300 ISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPST- 358
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
++Y +MI L AE F + + DI N +I Y + R+++ +L
Sbjct: 359 -VTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLH 417
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 418
G N T+ + + GD+ A D L++ I +G P+ T T +
Sbjct: 418 EMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSG------VCPNVVTCNTLLD 471
Query: 419 HF-EQEKDVDGAEGFLEILKKAVDDLGVEVF---EPLIRTY 455
+ K D E F + K +D F EP ++TY
Sbjct: 472 GLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTY 512
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 162/378 (42%), Gaps = 23/378 (6%)
Query: 77 LSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS-KNHLTYGSLLNCYCK 135
L E +E++ V+ A+ V + + +A E Y LP + + +TY S+++ +CK
Sbjct: 311 LQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCK 370
Query: 136 ELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYT 195
+ + AE + + FN+L+ Y + + ++ EM + ++ ++ T
Sbjct: 371 QNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTIT 430
Query: 196 YNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 255
Y + V D++ A+ +++EM G V + T + L + G + A K +
Sbjct: 431 YTTLIHGFCQVGDLNAAQDLLQEMISSG-VCPNVVTCNTLLDGLCDNGKLKDALEMFKAM 489
Query: 256 E----NRNAHR-------DLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISY 302
+ + +A R D+ Y LI G E ++ + R P+T I+Y
Sbjct: 490 QKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDT--ITY 547
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+MI L L A + F S + D+ N +I Y K G +++ EL +
Sbjct: 548 SSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQ 607
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ 422
RG +A T+ + + ++ A+D ++ I +G P + TIR +
Sbjct: 608 RGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSG------VYPDTITIRNMLTGLWS 661
Query: 423 EKDVDGAEGFLEILKKAV 440
+++++ A LE L+ +V
Sbjct: 662 KEELERAVAMLEDLQMSV 679
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 139/349 (39%), Gaps = 27/349 (7%)
Query: 109 AENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMT 166
A N F+++ E + +TY ++N +C AE LL++M E + + F++L+
Sbjct: 272 AHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALIN 331
Query: 167 LYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA 226
+ K G + + EM SI+P + TY+ + N + AE + G +
Sbjct: 332 AFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKG-CS 390
Query: 227 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
D TF+ L + Y A + + L E+ + Y LI + Q G+L+ +
Sbjct: 391 PDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDL 450
Query: 287 WRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESG-----------CATYD 333
+ + PN + L + L + L A + FK + D
Sbjct: 451 LQEMISSGVCPNVVTCNTL--LDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPD 508
Query: 334 IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
++ N++I EG+ AEEL E RG P+ T+ D + L+
Sbjct: 509 VQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR-------LD 561
Query: 394 KAIDTGRGDGGK-WVPSSETIRTFMRHFEQEKDV-DGAEGFLEILKKAV 440
+A G K + P T T + + + V DG E F E+ ++ +
Sbjct: 562 EATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGI 610
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/400 (18%), Positives = 152/400 (38%), Gaps = 21/400 (5%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK---NHLTYGSLL 130
A+ L + M + G+ +D + K+ +A N + E S N + Y +++
Sbjct: 201 AVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTII 260
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
+ K+ A L +M+E + + +N ++ + +G ++QEM I
Sbjct: 261 DGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKIN 320
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
PD T++ + A AE + +EM + + T+S++ + + + AE
Sbjct: 321 PDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPS-TVTYSSMIDGFCKQNRLDAAEH 379
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
+ D+ + LI Y + + + ++ + A I+Y +I
Sbjct: 380 MFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFC 439
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR-------- 362
+ DL A+ +E S ++ N ++ G+L++A E+ + ++
Sbjct: 440 QVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDAS 499
Query: 363 ---RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
G +P+ +T+ I + G A + E+ G VP + T + +
Sbjct: 500 RPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRG------IVPDTITYSSMIDG 553
Query: 420 FEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
++ +D A + + V F LI Y AG
Sbjct: 554 LCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAG 593
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 70/152 (46%), Gaps = 2/152 (1%)
Query: 71 YYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGS 128
+ A +L E M RG+ + +D + K +D A F + S + +T+ +
Sbjct: 525 FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNT 584
Query: 129 LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS 188
L+ YCK M + L +M + + ++ + +L+ + K + + I QEM +S
Sbjct: 585 LITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSG 644
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
+ PD+ T + L + ++ A ++E+++
Sbjct: 645 VYPDTITIRNMLTGLWSKEELERAVAMLEDLQ 676
>gi|218190151|gb|EEC72578.1| hypothetical protein OsI_06020 [Oryza sativa Indica Group]
Length = 738
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 111/262 (42%), Gaps = 2/262 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N Y + L+ K TEKA + ++MK ++ F ++ +Y K P +
Sbjct: 387 NATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVF 446
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EMK+ P+ TY + A A AE V EEM++ G D ++ L Y
Sbjct: 447 NEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGH-EPDVYAYNALMEAYSR 505
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
AGL + A +++ D ++Y L+ YG+ G + ++ L+ + S
Sbjct: 506 AGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKS 565
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
++ ++ + E+ + T D N M+ AYA+ GRL++ E L
Sbjct: 566 HMLLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLLAAME 625
Query: 362 RRGADPNAKTWEIFSDYYLRNG 383
RRG D + T+ + + Y R G
Sbjct: 626 RRG-DADVGTYNVAVNAYGRAG 646
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 121/317 (38%), Gaps = 8/317 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N T+ ++N Y K + + +MK + + + +L+ +A+ G EK +
Sbjct: 422 NTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVF 481
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+EM+ + PD Y YN M A + GA + M+ G D +++ L Y
Sbjct: 482 EEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMG-CEPDRASYNILVDAYGR 540
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
AGL E AE +EL+ R + ++ L+ + ++GN + + L + +
Sbjct: 541 AGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTPDTFA 600
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
M+ L E+ E D+ NV + AY + G + E
Sbjct: 601 LNAMLNAYARAGRLDDMERLLAAMERR-GDADVGTYNVAVNAYGRAGYVGRMEAAFAAVA 659
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
RG + TW Y R + V +E+ +D G P + T R +
Sbjct: 660 ARGLAADVVTWTARMGAYARRKEYGRCVGMVEEMVDAG------CYPDAGTARVLLAACS 713
Query: 422 QEKDVDGAEGFLEILKK 438
E+ V+ + + K
Sbjct: 714 DERQVEQVTAIVRSMHK 730
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/337 (19%), Positives = 140/337 (41%), Gaps = 10/337 (2%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+ Y L+ Y K+ KAE++ + E + + L+ Y G + +I E
Sbjct: 319 ICYNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISE 378
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ I P++ YN ++ L A V + MKR+ R A+ TF+ + ++Y +A
Sbjct: 379 MREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRE-RCRANTETFTLMINVYGKAK 437
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
+ + E+++ ++ Y L+ + + G + ++ ++ A + ++
Sbjct: 438 QPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQA-GHEPDVYAY 496
Query: 304 NMIQVLVNLKDLP-GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
N + + LP GA + F + D N+++ AY + G E+AE + E ++
Sbjct: 497 NALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQ 556
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ 422
RG P K+ + + R+G+ + + + +G P + + + + +
Sbjct: 557 RGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSG------LTPDTFALNAMLNAYAR 610
Query: 423 EKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
+D E L +++ D V + + Y AG
Sbjct: 611 AGRLDDMERLLAAMERR-GDADVGTYNVAVNAYGRAG 646
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 147/354 (41%), Gaps = 11/354 (3%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET---SKNHLTYGSLL 130
A K+ M ++G+ +V +D K +G+ A+ + L E+ S N TY L+
Sbjct: 363 AKKILNGMLEKGLIPSVVTYNALIDGYCK-KGLSASALEILSLMESNNCSPNARTYNELI 421
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
+C+ KA +LL KM E L + + +N L+ K G ++ M S ++
Sbjct: 422 LGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLV 481
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
PD +TY+V++ L + A + E +K G + A+ +S L Y + G
Sbjct: 482 PDEWTYSVFIDTLCKRGLVEEARSLFESLKEKG-IKANEVIYSTLIDGYCKVGKVSDGRF 540
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
L ++ + + Y LI Y + N E + + A +Y +I L+
Sbjct: 541 LLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLL 600
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
+ A F + S + D+ + I AY GRL++AE L + +G P+
Sbjct: 601 KDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTM 660
Query: 371 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 424
+ +F D Y R G + A L++ + G PS T ++H K
Sbjct: 661 LYTLFIDAYGRFGSIDGAFGILKRMHEVG------CEPSYYTYSCLIKHLSNAK 708
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 141/339 (41%), Gaps = 13/339 (3%)
Query: 104 QGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPF 161
+ +DAA F+ +P +N ++Y +L++ +C+ ++A L +M E N + +
Sbjct: 253 KNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTY 312
Query: 162 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 221
++ + G + + +EM P+ +TY V + +L ++ A++++ M
Sbjct: 313 TVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLE 372
Query: 222 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 281
G + + T++ L Y + GL A L +E+ N + Y LI + + N+
Sbjct: 373 KGLIPS-VVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIH 431
Query: 282 EVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
+ + + R PN ++Y +I DL A K D +V
Sbjct: 432 KAMSLLHKMLERKLQPNV--VTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSV 489
Query: 340 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
I K G +E A L E + +G N + D Y + G + L+K + G
Sbjct: 490 FIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAG 549
Query: 400 RGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 438
VP+S T + + + +EK+ A ++I+ K
Sbjct: 550 ------CVPNSITYNSLIDGYCKEKNFKEARLLVDIMIK 582
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/319 (18%), Positives = 124/319 (38%), Gaps = 18/319 (5%)
Query: 130 LNCYCKELMTEKAEALLEKMKELNLGF-------SSMPFNSLMTLYAKTGHPEKIPAIIQ 182
L CY LM ++++MK + L + N+++ Y K G+ + +
Sbjct: 169 LRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVS 228
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
++ + + D++TY + ++ A + M G + + +++NL + EA
Sbjct: 229 KIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNE-VSYTNLIHGFCEA 287
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANI 300
++A + ++ N + Y +I Q G +E +++ + + PN
Sbjct: 288 RRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVH-- 345
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
+Y +I L + A+K + N +I Y K+G +A E+
Sbjct: 346 TYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLM 405
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 420
PNA+T+ + R ++ A+ L K ++ K P+ T +
Sbjct: 406 ESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLER------KLQPNVVTYNILIHGQ 459
Query: 421 EQEKDVDGAEGFLEILKKA 439
+E D+ A L ++ ++
Sbjct: 460 CKEGDLGSAYKLLSLMNES 478
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 66/333 (19%), Positives = 118/333 (35%), Gaps = 38/333 (11%)
Query: 77 LSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNH--LTYGSLLNCYC 134
L + M KR + I +D + K D A + F + T + Y + ++ YC
Sbjct: 576 LVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYC 635
Query: 135 KELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSY 194
+ AE L+ KM + +M + + Y + G + I++ M P Y
Sbjct: 636 SHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYY 695
Query: 195 TYNVWMRALA--------------------AVNDISGAERVIE---------EMKRDGRV 225
TY+ ++ L+ A ND S R ++ +M G
Sbjct: 696 TYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHG-C 754
Query: 226 AADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 285
A + T+ + + G E A R ++ + + Y L+ Q G E R
Sbjct: 755 APNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIR 814
Query: 286 IWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK---CFKEWESGCATYDIRVTNVMIG 342
W + + + ++ ++ L L D EK F + YD V V+I
Sbjct: 815 -WLDIMIENRHLPHLDSCKLL--LCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLID 871
Query: 343 AYAKEGRLENAEELKERARRRGADPNAKTWEIF 375
K+G + +L +G + KT+ +
Sbjct: 872 GLLKKGLSDKCSDLFGIMETQGCQIHPKTYSML 904
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 117/265 (44%), Gaps = 1/265 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +L+ YC+E + E+A ++ M + L S +N+++ K G + I+ E
Sbjct: 2 VTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIE 61
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + PD+ TYN + ++ S A+ + EM R G V D +FS+L +++
Sbjct: 62 MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQG-VVPDLVSFSSLMAVFSRNR 120
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
++A ++++ D Y L+ Y + GN+ E +I + I+Y
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
++ L K L A+K F E A D +I + ++G + A L +R
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLA 388
P+ + D + + G+M+ A
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKA 265
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 124/286 (43%), Gaps = 11/286 (3%)
Query: 117 PETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK 176
P+T+ TY +LL C+ +A+ + +M + + F+SLM ++++ H ++
Sbjct: 69 PDTT----TYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQ 124
Query: 177 IPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLA 236
++MK ++PD+ Y V M ++ A ++ +EM G V D ++ +
Sbjct: 125 ALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCV-LDVIAYNTIL 183
Query: 237 SIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPN 296
+ + + A++ E+ R A D + LI + Q GN+++ ++ ++
Sbjct: 184 NGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIK 243
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCA--TYDIRVT-NVMIGAYAKEGRLENA 353
++Y +I + ++ EK + W+ + + +T ++I AY G + A
Sbjct: 244 PDIVAYNTLIDGFCKVGEM---EKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEA 300
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
L + +G P T Y R+GD A + L + I G
Sbjct: 301 FRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKG 346
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 91/200 (45%), Gaps = 3/200 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
ALK+ + M ++G V L+ + K + + A+ F ++ E + T+ +L++
Sbjct: 160 ALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIH 219
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C++ KA +L M + N+ + +N+L+ + K G EK + M + I P
Sbjct: 220 GHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFP 279
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ TY + + A +V +S A R+ + M G + T + + Y +G KA+
Sbjct: 280 NHITYGILINAYCSVGHVSEAFRLWDVMIEKG-IKPTLVTCNTVIKGYCRSGDSSKADEF 338
Query: 252 LKELENRNAHRDLSAYQFLI 271
L + + D +Y LI
Sbjct: 339 LGRMIAKGVAPDHISYNTLI 358
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 110/252 (43%), Gaps = 3/252 (1%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY L++ CKE ++A+ LL M + + + + +++LM Y G I M
Sbjct: 344 TYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAM 403
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ + P +YN+ + L + A ++ EM V + T+++L ++G
Sbjct: 404 VQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHK-NVVPNTVTYNSLIDGLCKSGR 462
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
A +KEL +R D+ Y L+ + NL + ++ ++ +Y
Sbjct: 463 ITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTA 522
Query: 305 MIQVLVNLKDLPGAEKCFKE-WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I L L A+K F+ GC D+ NVMIG KEG L+ A +K +
Sbjct: 523 LIDGLCKGARLKNAQKLFQHILVKGCCI-DVYTYNVMIGGLCKEGMLDEALAMKSKMEDN 581
Query: 364 GADPNAKTWEIF 375
G P+A T+EI
Sbjct: 582 GCIPDAVTFEII 593
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/271 (19%), Positives = 111/271 (40%), Gaps = 5/271 (1%)
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
T + + Y ++++ CK+ + +A +M + + +++L+ + G
Sbjct: 267 STRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGA 326
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
+++ EM +I PD YTY + + AL + A+ ++ M ++G V + T+S L
Sbjct: 327 FSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEG-VKPNVVTYSTLMD 385
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFP 295
Y G A++ + + + +Y +I + ++ E + R + + P
Sbjct: 386 GYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVP 445
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEE 355
NT ++Y ++I L + A KE D+ ++ K L+ A
Sbjct: 446 NT--VTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIA 503
Query: 356 LKERARRRGADPNAKTWEIFSDYYLRNGDMK 386
L + + RG PN T+ D + +K
Sbjct: 504 LFMKMKERGIQPNKYTYTALIDGLCKGARLK 534
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 108/268 (40%), Gaps = 1/268 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N ++YG+LLN CK T A LL +++ + + +N+++ K +
Sbjct: 236 NQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFY 295
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EM + I PD TY+ + + GA ++ EM + D T++ L +
Sbjct: 296 TEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLK-NINPDVYTYTILIDALCK 354
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G ++A+ L + ++ Y L+ Y G + +I+ ++ N + S
Sbjct: 355 EGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCS 414
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y MI L K + A +E + N +I K GR+ +A +L +
Sbjct: 415 YNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELH 474
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAV 389
RG + T+ D +N ++ A+
Sbjct: 475 HRGQPADVITYTSLLDGLCKNQNLDKAI 502
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/361 (18%), Positives = 137/361 (37%), Gaps = 3/361 (0%)
Query: 42 QLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVA 101
Q N L + E G L L K + A+ LS+ ME +G+ + +I ++
Sbjct: 119 QFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFC 178
Query: 102 KVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSM 159
+ + + + + + N + +L+ C + +K+ +K+ + +
Sbjct: 179 HLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQV 238
Query: 160 PFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM 219
+ +L+ K G +++ ++ S PD YN + L ++ A EM
Sbjct: 239 SYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEM 298
Query: 220 KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGN 279
G + D T+S L + AG A L E+ +N + D+ Y LI + G
Sbjct: 299 NSRG-IFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGK 357
Query: 280 LSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
L E + + ++Y ++ + ++ A++ F + N+
Sbjct: 358 LKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNI 417
Query: 340 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
MI K ++ A L + PN T+ D ++G + A+D +++ G
Sbjct: 418 MINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRG 477
Query: 400 R 400
+
Sbjct: 478 Q 478
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 62/144 (43%), Gaps = 7/144 (4%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY SLL+ CK +KA AL KMKE + + + +L+ K + + Q
Sbjct: 483 ITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQH 542
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
+ D YTYNV + L + A + +M+ +G + D TF + E
Sbjct: 543 ILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCI-PDAVTFEIIIRSLFEKD 601
Query: 244 LFEKAERALKE------LENRNAH 261
+KAE+ L E L RN H
Sbjct: 602 ENDKAEKLLHEMIAKGLLHFRNFH 625
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 85/204 (41%), Gaps = 3/204 (1%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNH--LTYGSLLNCYCKELM 138
M K G+ V + +D V + A+ F + +T N +Y ++N CK
Sbjct: 368 MTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKS 427
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
++A LL +M N+ +++ +NSL+ K+G +++E+ D TY
Sbjct: 428 VDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTS 487
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
+ L ++ A + +MK G + + T++ L + + A++ + + +
Sbjct: 488 LLDGLCKNQNLDKAIALFMKMKERG-IQPNKYTYTALIDGLCKGARLKNAQKLFQHILVK 546
Query: 259 NAHRDLSAYQFLITLYGQTGNLSE 282
D+ Y +I + G L E
Sbjct: 547 GCCIDVYTYNVMIGGLCKEGMLDE 570
>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
Length = 913
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 133/310 (42%), Gaps = 3/310 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLN 131
A +L E M +G +I + + K+ I +A ++ + + N +TY +L+
Sbjct: 330 ATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLH 389
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+CK M + ALLE+M L +S +N ++ K G ++ +IQEM++ P
Sbjct: 390 SFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNP 449
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D +YN + L + AE + E + +G V A+ T++ + + G ++ A R
Sbjct: 450 DICSYNTIIYHLCNNEQMEEAEHMFENLLEEG-VVANGITYNTIIHALLRDGRWQDAVRL 508
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
KE+ D+ +Y LI + GN+ + + N+SY +I L
Sbjct: 509 AKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCK 568
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+ + A + K+ + DI N +I K G + A L E+ P+ T
Sbjct: 569 ERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIIT 628
Query: 372 WEIFSDYYLR 381
+ I ++ +
Sbjct: 629 YNILISWHCK 638
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 125/277 (45%), Gaps = 7/277 (2%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TYG LL C+ ++A A+L ++ ELN+ FN+++ G + + +
Sbjct: 281 MTYGFLLQGLCRVRQADEARAMLGRVPELNVVL----FNTVIGGCLAEGKLAEATELYET 336
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M PD++TY++ M L + I A R++ EM++ G A + T++ + + + G
Sbjct: 337 MGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKG-FAPNVVTYTIVLHSFCKNG 395
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
+++ L+E+ + + Y +I + G + E + + +R N SY
Sbjct: 396 MWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYN 455
Query: 304 NMIQVLVNLKDLPGAEKCFKE-WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+I L N + + AE F+ E G I N +I A ++GR ++A L +
Sbjct: 456 TIIYHLCNNEQMEEAEHMFENLLEEGVVANGI-TYNTIIHALLRDGRWQDAVRLAKEMIL 514
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
G + ++ ++G++ ++ LE+ + G
Sbjct: 515 HGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKG 551
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 59/301 (19%), Positives = 108/301 (35%), Gaps = 23/301 (7%)
Query: 165 MTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGR 224
+ LY + H +++P P ++T+ V RAL + A ++ M R G
Sbjct: 159 LALYRRMVHRDRVP------------PTTFTFGVAARALCRLGRADEALALLRGMARHGC 206
Query: 225 VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVY 284
V D + + + G +A L E+ D++ + ++ G + E
Sbjct: 207 V-PDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAA 265
Query: 285 RIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAY 344
R+ + ++Y ++Q L ++ A ++ + N +IG
Sbjct: 266 RLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGR----VPELNVVLFNTVIGGC 321
Query: 345 AKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGG 404
EG+L A EL E +G P+A T+ I + G + AV L + G
Sbjct: 322 LAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKG----- 376
Query: 405 KWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPV 464
+ P+ T + F + D LE + L + + +I GR
Sbjct: 377 -FAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEA 435
Query: 465 M 465
M
Sbjct: 436 M 436
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 51/277 (18%), Positives = 104/277 (37%), Gaps = 11/277 (3%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y ++++ C + +A LL +M + F+ ++ G + ++ M
Sbjct: 213 YQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMM 272
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA-ADWTTFSNLASIYVEAGL 244
MP TY ++ L V A ++ GRV + F+ + + G
Sbjct: 273 TKGCMPGVMTYGFLLQGLCRVRQADEARAML------GRVPELNVVLFNTVIGGCLAEGK 326
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL-RLAF-PNTANISY 302
+A + + + D Y L+ + G + R+ R + + F PN ++Y
Sbjct: 327 LAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNV--VTY 384
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
++ +E + T + + N MI A K+GR++ A L + R
Sbjct: 385 TIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRS 444
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+G +P+ ++ + N M+ A E ++ G
Sbjct: 445 QGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEG 481
>gi|410110141|gb|AFV61150.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
turbinata]
Length = 441
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 122/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 13 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAIS 72
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S PD YN + A +I EMK G V + T++S L ++Y
Sbjct: 73 IFSRLKXSGFXPDLVAYNAMINVFGKAKLFREARSLISEMKTAG-VMPNTTSYSTLLTMY 131
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ +R
Sbjct: 132 VENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 191
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 192 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 251
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 252 MQSRGVEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 291
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 111/221 (50%), Gaps = 20/221 (9%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 224 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGVEPNSITYSTIISIWGKVGKLDRAAML 283
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S + D + + A ++ A+R++ E+KR + D T LA
Sbjct: 284 FQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD-TAIHILAG--- 339
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + +D++ ++ +I L Y + N+ EV+ R L FP++
Sbjct: 340 -AGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVIEVFDKMRGLGY-FPDS 397
Query: 298 ANISYLNMIQVLVN----LKDLPGAEKCFKEW-ESGCATYD 333
++I +++N L++ A + E E GC D
Sbjct: 398 ------DVIAIVLNAYGKLQEFDKANDVYMEMQEVGCVFSD 432
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 90/211 (42%), Gaps = 8/211 (3%)
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+ EM+ ++ PD YTY+ + A +++M++D +V D +SNL +
Sbjct: 2 GLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-QVPGDLVLYSNLIEL 60
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPN 296
+ + KA L+ DL AY +I ++G+ E + ++ A PN
Sbjct: 61 SRKLCDYSKAISIFSRLKXSGFXPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPN 120
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
T SY ++ + V K A F E D+ N+MI Y + G + A++L
Sbjct: 121 TT--SYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 178
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDMKL 387
R+ G +PN ++ Y GD +L
Sbjct: 179 FWGMRKMGIEPNVVSYNTLLRVY---GDAEL 206
>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
Length = 897
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 133/310 (42%), Gaps = 3/310 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLN 131
A +L E M +G +I + + K+ I +A ++ + + N +TY +L+
Sbjct: 314 ATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLH 373
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+CK M + ALLE+M L +S +N ++ K G ++ +IQEM++ P
Sbjct: 374 SFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNP 433
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D +YN + L + AE + E + +G V A+ T++ + + G ++ A R
Sbjct: 434 DICSYNTIIYHLCNNEQMEEAEHMFENLLEEG-VVANGITYNTIIHALLRDGRWQDAVRL 492
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
KE+ D+ +Y LI + GN+ + + N+SY +I L
Sbjct: 493 AKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCK 552
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+ + A + K+ + DI N +I K G + A L E+ P+ T
Sbjct: 553 ERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIIT 612
Query: 372 WEIFSDYYLR 381
+ I ++ +
Sbjct: 613 YNILISWHCK 622
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 125/277 (45%), Gaps = 7/277 (2%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TYG LL C+ ++A A+L ++ ELN+ FN+++ G + + +
Sbjct: 265 MTYGFLLQGLCRVRQADEARAMLGRVPELNVVL----FNTVIGGCLAEGKLAEATELYET 320
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M PD++TY++ M L + I A R++ EM++ G A + T++ + + + G
Sbjct: 321 MGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKG-FAPNVVTYTIVLHSFCKNG 379
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
+++ L+E+ + + Y +I + G + E + + +R N SY
Sbjct: 380 MWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYN 439
Query: 304 NMIQVLVNLKDLPGAEKCFKE-WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+I L N + + AE F+ E G I N +I A ++GR ++A L +
Sbjct: 440 TIIYHLCNNEQMEEAEHMFENLLEEGVVANGI-TYNTIIHALLRDGRWQDAVRLAKEMIL 498
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
G + ++ ++G++ ++ LE+ + G
Sbjct: 499 HGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKG 535
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 60/309 (19%), Positives = 109/309 (35%), Gaps = 23/309 (7%)
Query: 157 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
+P LY + H +++P P ++T+ V RAL + A ++
Sbjct: 135 GGLPRARRFALYRRMVHRDRVP------------PTTFTFGVAARALCRLGRADEALALL 182
Query: 217 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 276
M R G V D + + + G +A L E+ D++ + ++
Sbjct: 183 RGMARHGCV-PDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCG 241
Query: 277 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 336
G + E R+ + ++Y ++Q L ++ A ++ +
Sbjct: 242 LGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGR----VPELNVVL 297
Query: 337 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 396
N +IG EG+L A EL E +G P+A T+ I + G + AV L +
Sbjct: 298 FNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREME 357
Query: 397 DTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYA 456
G + P+ T + F + D LE + L + + +I
Sbjct: 358 KKG------FAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALC 411
Query: 457 AAGRTSPVM 465
GR M
Sbjct: 412 KDGRMDEAM 420
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 51/277 (18%), Positives = 104/277 (37%), Gaps = 11/277 (3%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y ++++ C + +A LL +M + F+ ++ G + ++ M
Sbjct: 197 YQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMM 256
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA-ADWTTFSNLASIYVEAGL 244
MP TY ++ L V A ++ GRV + F+ + + G
Sbjct: 257 TKGCMPGVMTYGFLLQGLCRVRQADEARAML------GRVPELNVVLFNTVIGGCLAEGK 310
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL-RLAF-PNTANISY 302
+A + + + D Y L+ + G + R+ R + + F PN ++Y
Sbjct: 311 LAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNV--VTY 368
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
++ +E + T + + N MI A K+GR++ A L + R
Sbjct: 369 TIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRS 428
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+G +P+ ++ + N M+ A E ++ G
Sbjct: 429 QGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEG 465
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 115/278 (41%), Gaps = 2/278 (0%)
Query: 117 PETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK 176
P N +TY L++ YCK M E A L ++M + + + + N+L+ K G
Sbjct: 410 PRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRING 469
Query: 177 IPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLA 236
EM+ + ++ TY +RA VN+I A + +EM G + D + L
Sbjct: 470 AVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAG-CSPDAIVYYTLI 528
Query: 237 SIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPN 296
S +AG ++A L +++ D+ ++ LI + + L E Y + + + A
Sbjct: 529 SGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIK 588
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
++Y +I D A + K+ + +I AY G L+ A ++
Sbjct: 589 PDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKI 648
Query: 357 -KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
++ + PN + I + R + LA+ ++
Sbjct: 649 FRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMD 686
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/381 (17%), Positives = 145/381 (38%), Gaps = 55/381 (14%)
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
E N + L++ C+ T++A +L + +L + N+L+T + +++
Sbjct: 265 EVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRM 324
Query: 178 PAIIQEMKASSIMPDSYTYNVWMR----------ALAAVNDISGAER------------- 214
++ EMK I P+ T+ + + AL ++G E
Sbjct: 325 NTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYN 384
Query: 215 -----------------VIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 257
++E M+ R + T++ L Y +A + E A ++
Sbjct: 385 TLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNK 444
Query: 258 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 317
++ L+ + G ++ + ++ ++Y +I+ N+ ++
Sbjct: 445 DGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEK 504
Query: 318 AEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 376
A + F E E+GC+ D V +I ++ G+L+ A + + + G P+ ++ +
Sbjct: 505 AMELFDEMLEAGCSP-DAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLI 563
Query: 377 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 436
+ + R + A + L++ + G P T T + HF + D A ++
Sbjct: 564 NGFCRKNKLDEAYEMLKEMENAG------IKPDGVTYNTLISHFSKTGDFSTAH---RLM 614
Query: 437 KKAVDDLGVEVFEPLIRTYAA 457
KK V E P + TY A
Sbjct: 615 KKMVK----EGLVPTVVTYGA 631
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 147/351 (41%), Gaps = 46/351 (13%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y L+ + E+A LL +M+++ S F +L+ A+ G E A++ E+K
Sbjct: 179 YTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVK 238
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
S + PD YNV + + A + E+K G + D +++++ + +AG
Sbjct: 239 GSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHG-LRPDDVSYTSMVWVLCKAGRL 297
Query: 246 EKAERALKELENRNAHRDLS---AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY 302
+AE ++E A RD+ AY +I YG + Y++ LR + +S+
Sbjct: 298 GEAEELFGQME---AERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSF 354
Query: 303 LNMIQVLVNLKDLPGAEKCF----KEWESGCATYDIRV---------------------- 336
+++ L + + A F K+ + +TY+I +
Sbjct: 355 NSILTCLGKKRKVDEALTLFDVMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELA 414
Query: 337 --------TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 388
N+M+ K +LE A + E A RG +PN+ T+ D + G + A
Sbjct: 415 GLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDA 474
Query: 389 VDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 439
EK +D G D + +S IR F H +E DG + + E++++
Sbjct: 475 YRLFEKMLDAGH-DANPIIYTS-LIRNFFMHGRKE---DGHKIYKEMIRRG 520
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 140/324 (43%), Gaps = 7/324 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A K+ + ME G+ + I +D + K ++ A F E + N +TY SL++
Sbjct: 404 AYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLID 463
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMP--FNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
K+ + A L EKM L+ G + P + SL+ + G E I +EM
Sbjct: 464 GLGKKGKIDDAYRLFEKM--LDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGG 521
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
PD N +M + ++ + E+MK G + D ++S L +AG +
Sbjct: 522 RPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLP-DVRSYSILIHGLTKAGQARETS 580
Query: 250 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 309
+ + + D AY ++ ++G + + Y + +++ + +Y +++ L
Sbjct: 581 NIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGL 640
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
+ L A F+E +S ++ + + +I + K GR++ A + E ++G PN
Sbjct: 641 AKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNV 700
Query: 370 KTWEIFSDYYLRNGDMKLAVDCLE 393
TW D ++ ++ A+ C +
Sbjct: 701 YTWNSLMDALVKTEEIDEALICFQ 724
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 94/230 (40%), Gaps = 1/230 (0%)
Query: 143 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 202
E +LE+M L G + +L+ ++ E +I M+ P Y V + A
Sbjct: 126 EKVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGA 185
Query: 203 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 262
LA A ++ +M+ G F+ L G E A + E++
Sbjct: 186 LAEARQPERALELLRQMQDVG-YEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEP 244
Query: 263 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 322
D+ Y I +G+ G++ ++ + L+ ++SY +M+ VL L AE+ F
Sbjct: 245 DIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELF 304
Query: 323 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
+ E+ N MI Y R ++A +L ER R RG P+ ++
Sbjct: 305 GQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSF 354
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 99/221 (44%), Gaps = 3/221 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A ++ E M+ + ++ TV+ +D +AK+ +D A F + N + Y SL++
Sbjct: 614 AYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLID 673
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ K ++A +LE+M + L + +NSLM KT ++ Q MK P
Sbjct: 674 GFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSP 733
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
++YTY++ + L V + A +EM++ G + + T++ + S + G A
Sbjct: 734 NTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLI-PNVVTYTTMISGLAKVGNITDAYSL 792
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL 292
+ + D +++ LI E Y+++ RL
Sbjct: 793 FERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRL 833
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 116/276 (42%), Gaps = 12/276 (4%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y ++++ CK +KA +LE+MK ++ + + S++ AK ++ + +E K
Sbjct: 598 YNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAK 657
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
+ I + Y+ + V I A ++EEM + G + + T+++L V+
Sbjct: 658 SKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKG-LTPNVYTWNSLMDALVKTEEI 716
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYL 303
++A + ++ + Y LI + ++ + W+ ++ PN ++Y
Sbjct: 717 DEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNV--VTYT 774
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
MI L + ++ A F+ +++ D N +I + R A ++ E R R
Sbjct: 775 TMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLR 834
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
G N KT D + +CLE+A G
Sbjct: 835 GCRLNVKTCISLLDALNKT-------ECLEQAAIVG 863
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/306 (20%), Positives = 120/306 (39%), Gaps = 4/306 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHL-TYGSLLNC 132
A KL E + +RG +V L + K + +D A F + + +K ++ TY +++
Sbjct: 335 AYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDAKPNISTYNIIIDM 394
Query: 133 YCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPD 192
C +A + ++M+ L + + N ++ K E+ I + P+
Sbjct: 395 LCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPN 454
Query: 193 SYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERAL 252
S TY + L I A R+ E+M G A+ +++L + G E +
Sbjct: 455 SVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGH-DANPIIYTSLIRNFFMHGRKEDGHKIY 513
Query: 253 KELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI-SYLNMIQVLVN 311
KE+ R DL+ + + G + + I+ ++ +F ++ SY +I L
Sbjct: 514 KEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMK-SFGFLPDVRSYSILIHGLTK 572
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
F+ D R N ++ K G+++ A E+ E + + P T
Sbjct: 573 AGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVAT 632
Query: 372 WEIFSD 377
+ D
Sbjct: 633 YGSIVD 638
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 69/147 (46%), Gaps = 2/147 (1%)
Query: 79 ENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKE 136
E M K+G+ V +D + K + ID A F + E S N TY L+N C+
Sbjct: 689 EEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRV 748
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 196
KA ++M++ L + + + ++++ AK G+ ++ + K + +PDS ++
Sbjct: 749 QKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASF 808
Query: 197 NVWMRALAAVNDISGAERVIEEMKRDG 223
N + ++ N A +V EE + G
Sbjct: 809 NALIEGMSNANRPMEAYQVFEETRLRG 835
>gi|224126121|ref|XP_002329666.1| predicted protein [Populus trichocarpa]
gi|222870547|gb|EEF07678.1| predicted protein [Populus trichocarpa]
Length = 821
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/356 (20%), Positives = 152/356 (42%), Gaps = 13/356 (3%)
Query: 70 LYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYG 127
Y L + M + G+ ++ + +D A + + + E+ + N TY
Sbjct: 365 FYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYN 424
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 187
++L K+ +E+ +L MK + + +N+++++ G + + + QEMK+
Sbjct: 425 AILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEMKSC 484
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
PD T+N + A AE++ +EM G T++ L + G +
Sbjct: 485 GFEPDRDTFNTLITASGRCGSDIDAEKIYDEMLEAG-FTPSVATYNALLNALARRGDWRT 543
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNM 305
AE +K+++N+ ++Y ++ Y + G + + RI + + FP+ + L
Sbjct: 544 AESVIKDMKNKGFKPSETSYSLILNSYAKGGYVKGINRIEKDIYDGHIFPSWMLLRTL-- 601
Query: 306 IQVLVNLK--DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+L N K L G E+ F+ + D+ V N M+ ++++ + A E+ +
Sbjct: 602 --ILANFKCRALAGMERAFQALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQEC 659
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
G P+ T+ D Y R G+ A + L + ++ GD + + I+ F R
Sbjct: 660 GLQPDLVTYNSLMDLYARGGECWKAEEILRELQNS--GDKSDLISYNTVIKGFCRQ 713
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 103/475 (21%), Positives = 201/475 (42%), Gaps = 49/475 (10%)
Query: 38 SVRQQ----LNQFLKSKK-RVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGM------ 86
S+++Q LN F +S K +F+ ++ LK AL LS + E+ +
Sbjct: 113 SIKEQPLGGLNDFFESCKFELFQVDLIGVLK----------ALDLSGDCERAILLFEWLV 162
Query: 87 ------NKTVSDQAIHLDLVAKVQGIDAAENY------FVDLPETSKNHLTYGSLLNCYC 134
N + +QA+ +L+A++ G ++ + + L + S + Y ++L+ Y
Sbjct: 163 LNLGTGNVNLDNQAV--ELMARILGRESQHSIASKLFDVIPLDDYSLDVRAYTTILHSYS 220
Query: 135 KELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEMKASSIMPDS 193
+ E+A A+ EKM E L + + +N ++ +Y K G KI ++ EM++ + D
Sbjct: 221 RCGKYERAVAIFEKMNESGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSKGLGFDE 280
Query: 194 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 253
+T + + A + A+ +K G A T++ L ++ +AG++ +A +K
Sbjct: 281 FTCSTVISACGREGLLDEAKEFFVGLKSQG-YAPGTVTYNALLQVFGKAGIYSEALSIMK 339
Query: 254 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLK 313
E+E+ N D Y L+ Y + G E + ++ ++Y MI
Sbjct: 340 EMEDNNCPPDAVTYNELVAAYVRAGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAA 399
Query: 314 DLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
+ A + + ESGCA ++ N ++G K+ + E ++ + G PN TW
Sbjct: 400 QVDKALSLYDQMKESGCAP-NVCTYNAILGMLGKKSQSEEMMKILCDMKVDGCAPNRITW 458
Query: 373 EIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ-EKDVDGAEG 431
G K ++ G + P +T T + + D+D +
Sbjct: 459 NTMLSMCGNKGMHKYVKRVFQEMKSCG------FEPDRDTFNTLITASGRCGSDIDAEKI 512
Query: 432 FLEILKKAVDDLGVEVFEPLIRTYAAAG--RTSPVMLRRLKMEKVEVSEASKKLL 484
+ E+L+ V + L+ A G RT+ +++ +K + + SE S L+
Sbjct: 513 YDEMLEAGFTP-SVATYNALLNALARRGDWRTAESVIKDMKNKGFKPSETSYSLI 566
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/353 (19%), Positives = 156/353 (44%), Gaps = 9/353 (2%)
Query: 106 IDAAENYFVDLPET--SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNS 163
+D A+ +FV L + +TY +LL + K + +A +++++M++ N ++ +N
Sbjct: 296 LDEAKEFFVGLKSQGYAPGTVTYNALLQVFGKAGIYSEALSIMKEMEDNNCPPDAVTYNE 355
Query: 164 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
L+ Y + G E+ A+I M + I P++ TY + A + A + ++MK G
Sbjct: 356 LVAAYVRAGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESG 415
Query: 224 RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 283
A + T++ + + + E+ + L +++ + + ++++ G G V
Sbjct: 416 -CAPNVCTYNAILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYV 474
Query: 284 YRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGA 343
R+++ ++ ++ +I AEK + E T + N ++ A
Sbjct: 475 KRVFQEMKSCGFEPDRDTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALLNA 534
Query: 344 YAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDG 403
A+ G AE + + + +G P+ ++ + + Y + G +K ++ +EK I G
Sbjct: 535 LARRGDWRTAESVIKDMKNKGFKPSETSYSLILNSYAKGGYVK-GINRIEKDIYDGH--- 590
Query: 404 GKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYA 456
PS +RT + + + + G E + L+K + VF ++ ++
Sbjct: 591 --IFPSWMLLRTLILANFKCRALAGMERAFQALQKHGYKPDLVVFNSMLSMFS 641
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 114/273 (41%), Gaps = 1/273 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY +LLN + AE++++ MK S ++ ++ YAK G+ + I I +++
Sbjct: 527 TYNALLNALARRGDWRTAESVIKDMKNKGFKPSETSYSLILNSYAKGGYVKGINRIEKDI 586
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
I P + A ++G ER + +++ G D F+++ S++ +
Sbjct: 587 YDGHIFPSWMLLRTLILANFKCRALAGMERAFQALQKHG-YKPDLVVFNSMLSMFSRKNM 645
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
++A + ++ DL Y L+ LY + G + I R L+ + + ISY
Sbjct: 646 HDRAHEIMHLIQECGLQPDLVTYNSLMDLYARGGECWKAEEILRELQNSGDKSDLISYNT 705
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+I+ + A + E S I N +G YA +G +E+ +
Sbjct: 706 VIKGFCRQGLMHEALRTLSEMISRGIRPCIVTYNTFVGGYAAKGMFAEIDEVLSYMTKHD 765
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
PN T++I D Y + K A+D + D
Sbjct: 766 CRPNELTYKIVVDGYCKAKKFKEAMDFVSTITD 798
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/346 (18%), Positives = 122/346 (35%), Gaps = 36/346 (10%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP--ETSKNHLTYGSLLN 131
AL L + M++ G V L ++ K + D+ + N +T+ ++L+
Sbjct: 404 ALSLYDQMKESGCAPNVCTYNAILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLS 463
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ M + + + ++MK FN+L+T + G I EM + P
Sbjct: 464 MCGNKGMHKYVKRVFQEMKSCGFEPDRDTFNTLITASGRCGSDIDAEKIYDEMLEAGFTP 523
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKR------------------------------ 221
TYN + ALA D AE VI++MK
Sbjct: 524 SVATYNALLNALARRGDWRTAESVIKDMKNKGFKPSETSYSLILNSYAKGGYVKGINRIE 583
Query: 222 ----DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQT 277
DG + W L + ERA + L+ DL + +++++ +
Sbjct: 584 KDIYDGHIFPSWMLLRTLILANFKCRALAGMERAFQALQKHGYKPDLVVFNSMLSMFSRK 643
Query: 278 GNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVT 337
+ I ++ ++Y +++ + + AE+ +E ++ D+
Sbjct: 644 NMHDRAHEIMHLIQECGLQPDLVTYNSLMDLYARGGECWKAEEILRELQNSGDKSDLISY 703
Query: 338 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
N +I + ++G + A RG P T+ F Y G
Sbjct: 704 NTVIKGFCRQGLMHEALRTLSEMISRGIRPCIVTYNTFVGGYAAKG 749
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 72/159 (45%), Gaps = 1/159 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+ + S+L+ + ++ M ++A ++ ++E L + +NSLM LYA+ G K I++E
Sbjct: 631 VVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSLMDLYARGGECWKAEEILRE 690
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
++ S D +YN ++ + A R + EM G + T++ Y G
Sbjct: 691 LQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEMISRG-IRPCIVTYNTFVGGYAAKG 749
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 282
+F + + L + + + Y+ ++ Y + E
Sbjct: 750 MFAEIDEVLSYMTKHDCRPNELTYKIVVDGYCKAKKFKE 788
>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g12100, mitochondrial; Flags: Precursor
gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 816
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 146/337 (43%), Gaps = 24/337 (7%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
Y L++ CK AE L ++M L S + +N+L+ Y K G+PEK + +
Sbjct: 215 FIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRER 274
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
MKA I P T+N ++ L + AE V++EMK G V D TFS L Y
Sbjct: 275 MKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFV-PDAFTFSILFDGYSSN- 332
Query: 244 LFEKAERALKELENR-NAHRDLSAY--QFLITLYGQTGNLSEVYRIW-RSLRLAF-PNTA 298
EKAE AL E ++ ++AY L+ + G + + I R + PN
Sbjct: 333 --EKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPN-- 388
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+ Y MI DL GA + E D N +I + + G +ENAE+
Sbjct: 389 EVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVN 448
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 418
+ + +G P+ +T+ I Y R + D L++ D G +P+ + T +
Sbjct: 449 KMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNG------TMPNVVSYGTLIN 502
Query: 419 HFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 455
+ + A +I+K+ ++D GV P +R Y
Sbjct: 503 CLCKGSKLLEA----QIVKRDMEDRGV---SPKVRIY 532
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 116/278 (41%), Gaps = 1/278 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N T LLN CKE EKAE +L + L + + +N+++ Y + G I
Sbjct: 353 NAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKI 412
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+ M+ + PD YN +R + ++ AE+ + +MK G V+ T++ L Y
Sbjct: 413 EAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKG-VSPSVETYNILIGGYGR 471
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
F+K LKE+E+ ++ +Y LI + L E + R + +
Sbjct: 472 KYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRI 531
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I + + A + KE ++ N +I + G+L AE+L
Sbjct: 532 YNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEIS 591
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
R+G P+ T+ Y G+++ + E+ +G
Sbjct: 592 RKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSG 629
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 8/202 (3%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCY 133
+ L E M++ G+ T+ + + L K +GI+ E F ++ + L Y +L+CY
Sbjct: 618 CIALYEEMKRSGIKPTLKTYHLLISLCTK-EGIELTERLFGEM-SLKPDLLVYNGVLHCY 675
Query: 134 CKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDS 193
EKA L ++M E ++G +NSL+ K G ++ ++I EM A + P++
Sbjct: 676 AVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEA 735
Query: 194 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 253
TYN+ ++ V D A EM+ G + D + L S E ++AE +
Sbjct: 736 DTYNIIVKGHCEVKDYMSAYVWYREMQEKGFL-LDVCIGNELVSGLKEEWRSKEAEIVIS 794
Query: 254 ELENR-----NAHRDLSAYQFL 270
E+ R DLSA + L
Sbjct: 795 EMNGRMLGDVTVDEDLSATEKL 816
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 109/258 (42%), Gaps = 7/258 (2%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
T N ++YG+L+NC CK +A+ + M++ + +N L+ G E
Sbjct: 490 TMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAF 549
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+EM I + TYN + L+ +S AE ++ E+ R G + D T+++L S
Sbjct: 550 RFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKG-LKPDVFTYNSLISG 608
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG-NLSEVYRIWRSLRLAFPNT 297
Y AG ++ +E++ L Y LI+L + G L+E R++ + L P+
Sbjct: 609 YGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTE--RLFGEMSLK-PDL 665
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
+ Y ++ D+ A K+ D N +I K G+L L
Sbjct: 666 --LVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLI 723
Query: 358 ERARRRGADPNAKTWEIF 375
+ R +P A T+ I
Sbjct: 724 DEMNAREMEPEADTYNII 741
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 109/252 (43%), Gaps = 1/252 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
TY L+N CKE + A L +M + L + + F +L+ + TG + I Q+
Sbjct: 296 FTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQ 355
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + PD TYN + L V D+ A++++ EM + G + D T++ L + G
Sbjct: 356 MLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRG-LKPDKFTYTMLIDGCCKEG 414
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
E A KE+ D A+ LI+ + + G + E R R + A + +Y
Sbjct: 415 DLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYT 474
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I D+ K KE + + NV++ K+G+++NA L +
Sbjct: 475 MVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNL 534
Query: 364 GADPNAKTWEIF 375
G P+ T+ I
Sbjct: 535 GVVPDDITYNIL 546
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 132/320 (41%), Gaps = 11/320 (3%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
+ L++ CKE +A+ L ++ + L + + FN+L+ Y K+G+ ++ + + M
Sbjct: 228 FNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMM 287
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
+ + PD +TY+V + L + A ++ EM G V D TF+ L + + G
Sbjct: 288 ENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPND-VTFTTLINGHCVTGRA 346
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
+ +++ + D+ Y LI + G+L E ++ + +Y +
Sbjct: 347 DLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTML 406
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
I DL A + KE D +I + +EG++ AE G
Sbjct: 407 IDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGI 466
Query: 366 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKD 425
P+ T+ + + + GD+K L++ + DG VP T + ++
Sbjct: 467 KPDDATYTMVIHGFCKKGDVKTGFKLLKEM----QCDG--HVPGVVTYNVLLNGLCKQGQ 520
Query: 426 VDGAEGFLEILKKAVDDLGV 445
+ A L+ A+ +LGV
Sbjct: 521 MKNANMLLD----AMLNLGV 536
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 51/109 (46%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+++ + +L++ +C+E +AE L +M E + + ++ + K G + ++
Sbjct: 434 DNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLL 493
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWT 230
+EM+ +P TYNV + L + A +++ M G V D T
Sbjct: 494 KEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDIT 542
>gi|147779268|emb|CAN70089.1| hypothetical protein VITISV_038171 [Vitis vinifera]
Length = 838
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 130/350 (37%), Gaps = 39/350 (11%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL--PETSKNHLTYGSLLN 131
A+++ E M++ + + + ++L K A F ++ + N T+ +L+N
Sbjct: 187 AVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVN 246
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ +E + EKAE + E+++E L +N+LM Y++ G P I M+ P
Sbjct: 247 AFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEP 306
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D +YN+ + A A+ V E MKR G + + L S Y AG K E
Sbjct: 307 DRASYNIMVDAYGRAGLHEDAQAVFEVMKRLG-ITPTMKSHMLLLSAYSRAGKVAKCEEI 365
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
+ ++ D ++ LYG+ G ++
Sbjct: 366 VNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKM---------------------------- 397
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
E+ E G DI N++I Y + G EEL R P+ T
Sbjct: 398 -------EEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVT 450
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAIDTG-RGDGGKWVPSSETIRTFMRHF 420
W Y R ++ E+ ID G DGG + FM F
Sbjct: 451 WTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKNVLLKVAIFMASF 500
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 148/378 (39%), Gaps = 53/378 (14%)
Query: 93 QAIHLDLVAKVQGIDA---------AENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEK 141
+ H D++ IDA AE+ +++L E TY LL YC + EK
Sbjct: 92 SSFHPDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEK 151
Query: 142 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 201
AEA+ +M++ S++ +N+ + K G +K I + MK P + TY + +
Sbjct: 152 AEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLIN 211
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 261
+ A +V EM R + + TF+ L + + GL EKAE ++L+
Sbjct: 212 LYGKASKSYMALKVFHEM-RSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLE 270
Query: 262 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 321
D+ AY L+ Y + G FP GA +
Sbjct: 271 PDVYAYNALMEAYSRAG---------------FPY--------------------GAAEI 295
Query: 322 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 381
F + D N+M+ AY + G E+A+ + E +R G P K+ + Y R
Sbjct: 296 FSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSR 355
Query: 382 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVD 441
G + C E+ ++ G K P + + + + + + + E L ++K
Sbjct: 356 AGKV---AKC-EEIVNQMHKSGIK--PDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPY 409
Query: 442 DLGVEVFEPLIRTYAAAG 459
+ + LI Y AG
Sbjct: 410 PADISTYNILINIYGRAG 427
>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 721
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 121/274 (44%), Gaps = 9/274 (3%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S N T+ ++++ C+ M +A L +MKE + S + +N ++ + ++G+ +
Sbjct: 329 SPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFH 388
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
++ EM +PD+YTY + L +V +S A+ ++++ +D + +S L Y
Sbjct: 389 LLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHH-KLNNMCYSALVHGY 447
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
+ G F+ A A + + R DL Y LI + + ++ + + +
Sbjct: 448 CKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDA 507
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEW----ESGCATYDIRVTNVMIGAYAKEGRLENAEE 355
+ Y NMI +L A F W + GC ++ +I K G ++ AE
Sbjct: 508 VIYTNMIDRHSKAGNLKEA---FGLWDIMVDEGCLP-NVVTYTALINGLCKAGLMDKAEL 563
Query: 356 LKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 389
L + PN T+ F D+ R G+M+ AV
Sbjct: 564 LSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAV 597
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 119/280 (42%), Gaps = 5/280 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
NH+TY L++ +C+ + A L+KM + ++ F+ P+NSL+ Y K G+
Sbjct: 226 NHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYF 285
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EM + P TY + + A +V EM G ++ + TF+ + S
Sbjct: 286 DEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKG-ISPNTYTFTAIISGLCR 344
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTAN 299
A + +A R E++ R Y +I + ++GN+SE + + + + P+T
Sbjct: 345 ANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDT-- 402
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+Y +I L ++ + A++ + + + ++ Y KEGR ++A
Sbjct: 403 YTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRV 462
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
RG + + I D R D + L++ + G
Sbjct: 463 MVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHG 502
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 73/165 (44%), Gaps = 2/165 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY +L+N CK + +KAE L ++ ++ + + + + + G+ EK +
Sbjct: 541 NVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLH 600
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M + + +YN+ +R + I A +++ M D + D+ T+S + +
Sbjct: 601 HAM-LKGFLATTVSYNILIRGFCRLGKIEEATKLLHGMT-DNDILPDYITYSTIIYEQCK 658
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
++A + + ++ D AY FL+ G L + + +
Sbjct: 659 RSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFEL 703
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 67/161 (41%), Gaps = 15/161 (9%)
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +++ L LKD A++ E I V NV+I K R+ A E+K
Sbjct: 134 YSAVVRSLCELKDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLM 193
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
++G + N T YY + + +L L K + +G + S I +F R E
Sbjct: 194 QKGLEANVVT------YYGKFNEAEL----LFKEMGE-KGLCANHITYSILIDSFCRRGE 242
Query: 422 QEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTS 462
+D A GFL+ + KA + V + LI Y G S
Sbjct: 243 ----MDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNAS 279
>gi|356525958|ref|XP_003531588.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like [Glycine max]
Length = 630
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 131/315 (41%), Gaps = 8/315 (2%)
Query: 124 LTYGSLL-NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQ 182
+TY +LL C E KA L+++++ L + + ++M + A E+
Sbjct: 176 VTYTTLLAGCIKIENGYAKALELIQELQHNKLQMDGVIYGTIMAVCASNTKWEEAEYYFN 235
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
+MK P+ Y Y+ + A +A + A+ +I++MK +G V + + L +YV+
Sbjct: 236 QMKDEGHTPNVYHYSSLINAYSACGNYKKADMLIQDMKSEGLVP-NKVILTTLLKVYVKG 294
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY 302
GLFEK+ L EL++ D Y + + G + E I+ + + ++
Sbjct: 295 GLFEKSRELLAELKSLGYAEDEMPYCIFMDGLAKAGQIHEAKLIFDEMMKNHVRSDGYAH 354
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
MI K A++ K++E+ YD+ + N M+ A+ + G +E E ++
Sbjct: 355 SIMISAFCRAKLFREAKQLAKDFETTSNKYDLVILNSMLCAFCRVGEMERVMETLKKMDE 414
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ 422
+P T+ I Y+ R LA ++ G P E + + H Q
Sbjct: 415 LAINPGYNTFHILIKYFCREKMYLLAYRTMKDMHSKGHQ------PVEELCSSLISHLGQ 468
Query: 423 EKDVDGAEGFLEILK 437
A +LK
Sbjct: 469 VNAYSEAFSVYNMLK 483
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 78/204 (38%), Gaps = 34/204 (16%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N + +LL Y K + EK+ LL ++K L MP+ M AK G + I
Sbjct: 280 NKVILTTLLKVYVKGGLFEKSRELLAELKSLGYAEDEMPYCIFMDGLAKAGQIHEAKLIF 339
Query: 182 QEMKASSIMPDSYTYNVWMRA--------------------------------LAAVNDI 209
EM + + D Y +++ + A L A +
Sbjct: 340 DEMMKNHVRSDGYAHSIMISAFCRAKLFREAKQLAKDFETTSNKYDLVILNSMLCAFCRV 399
Query: 210 SGAERVIEEMKRDGRVAAD--WTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAY 267
ERV+E +K+ +A + + TF L + ++ A R +K++ ++
Sbjct: 400 GEMERVMETLKKMDELAINPGYNTFHILIKYFCREKMYLLAYRTMKDMHSKGHQPVEELC 459
Query: 268 QFLITLYGQTGNLSEVYRIWRSLR 291
LI+ GQ SE + ++ L+
Sbjct: 460 SSLISHLGQVNAYSEAFSVYNMLK 483
>gi|356577532|ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 932
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/389 (20%), Positives = 155/389 (39%), Gaps = 44/389 (11%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL M++ G+ T+ +I + AK+ DAA+++F + E S N + YG ++
Sbjct: 338 ALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIY 397
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C+ ++AEAL+ +M+E + ++++M Y G+ EK + +K P
Sbjct: 398 AHCQICNMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFP 457
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+Y + V +S A + + MK G + + T+S L + +++ + A
Sbjct: 458 SVISYGCLINLYTKVGKVSKALEISKMMKMSG-IKHNMKTYSMLINGFLKLKDWANAFSV 516
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
++ D+ Y +IT + GN+ + R ++ ++L +I
Sbjct: 517 FEDFTKDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIH---- 572
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+A+ G + A E+ + RR G P T
Sbjct: 573 -------------------------------GFARAGEMRRALEIFDMMRRSGCIPTVHT 601
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG 431
+ + M AV L++ G G P+ T T M+ + D + A
Sbjct: 602 YNALILGLVEKRQMTKAVAILDEMNVAGVG------PNEHTYTTLMQGYASLGDTEKAFQ 655
Query: 432 FLEILKKAVDDLGVEVFEPLIRTYAAAGR 460
+ +L+ ++ V +E L+++ +GR
Sbjct: 656 YFTVLRNEGLEIDVYTYEALLKSCCKSGR 684
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/366 (19%), Positives = 155/366 (42%), Gaps = 10/366 (2%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y SL++ Y E+A + KMKE + + + ++ ++ +AK G+ + +E K
Sbjct: 322 YSSLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAK 381
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
++ Y + A + ++ AE ++ EM+ G + A + + Y G
Sbjct: 382 EKLPSLNAVIYGGIIYAHCQICNMDRAEALVREMEEQG-IDAPIDIYHTMMDGYTMIGNE 440
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
EK L+ + +Y LI LY + G +S+ I + ++++ +Y +
Sbjct: 441 EKCLIVFDRLKECGFFPSVISYGCLINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSML 500
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
I + LKD A F+++ D+ + N +I A+ G ++ A + + ++
Sbjct: 501 INGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERH 560
Query: 366 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKD 425
P +T+ + R G+M+ A++ + +G +P+ T + +++
Sbjct: 561 RPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSG------CIPTVHTYNALILGLVEKRQ 614
Query: 426 VDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVM--LRRLKMEKVEVSEAS-KK 482
+ A L+ + A + L++ YA+ G T L+ E +E+ + +
Sbjct: 615 MTKAVAILDEMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEA 674
Query: 483 LLEAIC 488
LL++ C
Sbjct: 675 LLKSCC 680
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/323 (19%), Positives = 133/323 (41%), Gaps = 3/323 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
AL++S+ M+ G+ + ++ ++ K++ A + F D + + + Y +++
Sbjct: 478 ALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIIT 537
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C ++A ++ +M++ ++ F ++ +A+ G + I M+ S +P
Sbjct: 538 AFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIP 597
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+TYN + L ++ A +++EM G V + T++ L Y G EKA +
Sbjct: 598 TVHTYNALILGLVEKRQMTKAVAILDEMNVAG-VGPNEHTYTTLMQGYASLGDTEKAFQY 656
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
L N D+ Y+ L+ ++G + + + + Y +I
Sbjct: 657 FTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWAR 716
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
D+ A ++ DI I A K G ++ A E+ + G PN KT
Sbjct: 717 RGDVWEAADLMQQMRKEGLLPDIHTYTSFINACCKAGDMQKATEIIQEMEASGIKPNLKT 776
Query: 372 WEIFSDYYLRNGDMKLAVDCLEK 394
+ + + R + A+ C E+
Sbjct: 777 YTTLINGWARASMPEKALSCFEE 799
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 76/148 (51%), Gaps = 1/148 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY +LL CK + A A+ ++M N+ ++ +N L+ +A+ G + ++Q+M
Sbjct: 671 TYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQM 730
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ ++PD +TY ++ A D+ A +I+EM+ G + + T++ L + + A +
Sbjct: 731 RKEGLLPDIHTYTSFINACCKAGDMQKATEIIQEMEASG-IKPNLKTYTTLINGWARASM 789
Query: 245 FEKAERALKELENRNAHRDLSAYQFLIT 272
EKA +E++ D + Y L+T
Sbjct: 790 PEKALSCFEEMKLAGFKPDKAVYHCLVT 817
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 102/222 (45%), Gaps = 3/222 (1%)
Query: 74 ALKLSENMEKRGMNKTVSD-QAIHLDLVAKVQGIDAAENYF-VDLPETSKNHLTYGSLLN 131
AL++ + M + G TV A+ L LV K Q A +++ N TY +L+
Sbjct: 583 ALEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQ 642
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
Y TEKA ++ L + +L+ K+G + A+ +EM A +I
Sbjct: 643 GYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPR 702
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+++ YN+ + A D+ A ++++M+++G + D T+++ + +AG +KA
Sbjct: 703 NTFVYNILIDGWARRGDVWEAADLMQQMRKEG-LLPDIHTYTSFINACCKAGDMQKATEI 761
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 293
++E+E +L Y LI + + + + ++LA
Sbjct: 762 IQEMEASGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLA 803
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 41/79 (51%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY S +N CK +KA ++++M+ + + + +L+ +A+ PEK + +EM
Sbjct: 741 TYTSFINACCKAGDMQKATEIIQEMEASGIKPNLKTYTTLINGWARASMPEKALSCFEEM 800
Query: 185 KASSIMPDSYTYNVWMRAL 203
K + PD Y+ + +L
Sbjct: 801 KLAGFKPDKAVYHCLVTSL 819
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 47/103 (45%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N Y L++ + + +A L+++M++ L + S + K G +K I
Sbjct: 702 RNTFVYNILIDGWARRGDVWEAADLMQQMRKEGLLPDIHTYTSFINACCKAGDMQKATEI 761
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
IQEM+AS I P+ TY + A + A EEMK G
Sbjct: 762 IQEMEASGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAG 804
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 137/325 (42%), Gaps = 16/325 (4%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +T+ L+ +C+ M E+A +LE+M ++ N ++ K G + +
Sbjct: 284 NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFL 343
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M + PD+ +Y ++ L A+ +++EM R + TF+ I +
Sbjct: 344 NNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN-CPPNEVTFNTFICILCQ 402
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
GL E+A ++++ ++ Y L+ + G + ++ S+ PNT I+
Sbjct: 403 KGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK-PNT--IT 459
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
Y ++ L N + L A + E + CA ++ NV++ + ++G ++ A EL E+
Sbjct: 460 YTTLLTGLCNAERLDAAAELLAEMLQKDCAP-NVVTFNVLVSFFCQKGLMDEAIELVEQM 518
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 420
G PN T+ D + + + A++ L + G P T + +
Sbjct: 519 MEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVS------PDIVTYSSIIGVL 572
Query: 421 EQEKDVDGAEGFLEILKKAVDDLGV 445
+E V+ A I V DLG+
Sbjct: 573 SREDRVEEAIKMFHI----VQDLGM 593
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 87/432 (20%), Positives = 169/432 (39%), Gaps = 52/432 (12%)
Query: 62 LKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL--PET 119
++ L DR AL L ++M RG +V + L+ V K G A ++
Sbjct: 152 IRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGC 211
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
+ N +TY ++N C+E + A L ++ ++ + +++ E +
Sbjct: 212 TPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEE 271
Query: 180 IIQEMKASSIMPDSYTYNVWM----------RALAAVNDISG---------AERVIEEMK 220
+ EM + MP+ T+++ + RA+ + +SG VI +
Sbjct: 272 LFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTIC 331
Query: 221 RDGRVAADWTTFSNLAS----------IYVEAGL-----FEKAERALKELENRNAHRDLS 265
+ GRV + +N+ S V GL +E A+ LKE+ +N +
Sbjct: 332 KQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEV 391
Query: 266 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 325
+ I + Q G + + + + ++Y ++ + A + F +
Sbjct: 392 TFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF--Y 449
Query: 326 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 385
C I T ++ G E RL+ A EL ++ PN T+ + ++ + G M
Sbjct: 450 SMPCKPNTITYTTLLTGLCNAE-RLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLM 508
Query: 386 KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGV 445
A++ +E+ ++ G P+ T T + + + +E LE+L V + GV
Sbjct: 509 DEAIELVEQMMEHG------CTPNLITYNTLLDGITNDCN---SEEALELLHGLVSN-GV 558
Query: 446 EVFEPLIRTYAA 457
P I TY++
Sbjct: 559 ---SPDIVTYSS 567
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/303 (18%), Positives = 124/303 (40%), Gaps = 10/303 (3%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A+++ E M G + I ++ + K +D A + ++ S + ++Y ++L
Sbjct: 304 AIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLK 363
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C+ E A+ LL++M N + + FN+ + + + G E+ +I++M
Sbjct: 364 GLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEV 423
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ TYN + + A + M + T++ L + A + A
Sbjct: 424 NIVTYNALVNGFCVQGRVDSALELFYSMP----CKPNTITYTTLLTGLCNAERLDAAAEL 479
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVL 309
L E+ ++ ++ + L++ + Q G + E + + PN I+Y ++ +
Sbjct: 480 LAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNL--ITYNTLLDGI 537
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
N + A + S + DI + +IG ++E R+E A ++ + G P A
Sbjct: 538 TNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKA 597
Query: 370 KTW 372
+
Sbjct: 598 VIY 600
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/296 (19%), Positives = 116/296 (39%), Gaps = 6/296 (2%)
Query: 106 IDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLM 165
+DAA +P + + TY ++ C +A +LL+ M S + + L+
Sbjct: 129 LDAARRLIASMP-VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLL 187
Query: 166 TLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRV 225
K+ + ++ EM+A P+ TYNV + + + A + + G
Sbjct: 188 EAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYG-F 246
Query: 226 AADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 285
D +++ + A +E E E+ +N + + L+ + + G + +
Sbjct: 247 QPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQ 306
Query: 286 IWRSLRLAFPNTANISYLNM-IQVLVNLKDLPGAEKCFKEWES-GCATYDIRVTNVMIGA 343
+ + AN + N+ I + + A + S GC+ I T V+ G
Sbjct: 307 VLEQMS-GHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGL 365
Query: 344 YAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
E R E+A+EL + R+ PN T+ F + G ++ A +E+ + G
Sbjct: 366 CRAE-RWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHG 420
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 101/211 (47%), Gaps = 3/211 (1%)
Query: 101 AKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSS 158
+KV + AE F++L + S + ++++ Y K M K E +L MKE + S+
Sbjct: 569 SKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSA 628
Query: 159 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 218
+NSLM +Y++ G EK I+ E+K+S + PD Y+YN + A + A R+ E
Sbjct: 629 ATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSE 688
Query: 219 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 278
MK G + D T++ YV +FE+A ++ + + + Y ++ Y + G
Sbjct: 689 MKCSG-LKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNG 747
Query: 279 NLSEVYRIWRSLRLAFPNTANISYLNMIQVL 309
L++ +L P + N+ +V+
Sbjct: 748 KLTDAKIFVSNLPQLHPGYSKQEQQNLFEVI 778
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 115/251 (45%), Gaps = 1/251 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ +T+ SLL+ Y K ++A ++++M+ + S + +NSL++ Y K G E+ A+
Sbjct: 277 DKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALK 336
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
QEM+ + PD TY + L I A +EM R+G + T++ L ++
Sbjct: 337 QEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNG-CKPNLCTYNALIKMHGV 395
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G F + E + D+ + L+ ++GQ G SEV +++ ++ A +
Sbjct: 396 RGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDT 455
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y+++I A + +K D+ N ++ A A+ GR E AE+L
Sbjct: 456 YVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEME 515
Query: 362 RRGADPNAKTW 372
R P+ ++
Sbjct: 516 ERDCKPDEYSY 526
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 125/275 (45%), Gaps = 1/275 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY SL++ Y + + + A + ++M E + +N++++ A+ G E+ + EM
Sbjct: 455 TYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEM 514
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ PD Y+Y+ + A A + + + +++ + +W L + +
Sbjct: 515 EERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLV-KTLVLVNSKVNN 573
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+AE+A EL + D++ ++++YG+ + +V +I ++ + N + +Y +
Sbjct: 574 LAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNS 633
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
++ + L D E E +S D N +I AY ++G+++ A L + G
Sbjct: 634 LMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSG 693
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
P+ T+ IF Y+ N + A++ + + G
Sbjct: 694 LKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQG 728
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 119/273 (43%), Gaps = 4/273 (1%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY ++L+ + E+AE L +M+E + ++SL+ YA +K+ A+ ++
Sbjct: 490 TYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDI 549
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ I P ++ + + VN+++ AE+ E+ R R + D + + SIY + +
Sbjct: 550 YSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLEL-RQKRCSLDINVLNAMVSIYGKNRM 608
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
K E+ L ++ + + Y L+ +Y + G+ + I ++ + SY
Sbjct: 609 VRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNT 668
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+I + A + F E + D+ N+ + +Y E A EL +G
Sbjct: 669 VIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQG 728
Query: 365 ADPNAKTWEIFSDYYLRNG---DMKLAVDCLEK 394
PN +T+ + Y RNG D K+ V L +
Sbjct: 729 CKPNERTYNSIVEGYCRNGKLTDAKIFVSNLPQ 761
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 99/251 (39%), Gaps = 43/251 (17%)
Query: 141 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 200
+A ALL+ + G + +L++ +++ G A+ + M S + P TYNV +
Sbjct: 159 EASALLDAAPGPDAG----AYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVL 214
Query: 201 RALAAVNDISGAERV--IEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
+ + + E V + MK G VA D T++ L S L+++A + E++
Sbjct: 215 HVYSKMA-VPWKEVVELVASMKEHG-VAPDRYTYNTLISCCRRRALYKEAAQVFDEMKAS 272
Query: 259 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 318
D + L+ +YG+ E I+V+ ++ +
Sbjct: 273 GFEPDKVTFNSLLDVYGKARRHDEA----------------------IEVIQEMERV--- 307
Query: 319 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 378
GC + N +I +Y K+G LE A LK+ +G P+ T+
Sbjct: 308 ---------GCPP-SVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISG 357
Query: 379 YLRNGDMKLAV 389
R G + A+
Sbjct: 358 LDRAGKIDAAI 368
>gi|410110125|gb|AFV61142.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
micromera]
Length = 434
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 121/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 12 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKXCDYSKAIS 71
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S PD YN + A +I EMK G V + T++S L ++Y
Sbjct: 72 IFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAG-VMPNTTSYSTLLTMY 130
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
E F +A E+ DL+ +I +YGQ G E +++ +R
Sbjct: 131 XENKKFLEALSVFSEMREIKCXLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 190
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N MI Y K E A L +
Sbjct: 191 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQE 250
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 251 MQSRGIEPNSITYSTIISIWGKXGKLDRAAMLFQKLRSSG 290
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 111/221 (50%), Gaps = 20/221 (9%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 223 QNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKXGKLDRAAML 282
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S + D + + A ++ A+R++ E+KR + D T LA
Sbjct: 283 FQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD-TAIHILAG--- 338
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + +D++ ++ +I L Y + N+ EV+ R L FP++
Sbjct: 339 -AGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVIEVFDKMRGLGY-FPDS 396
Query: 298 ANISYLNMIQVLVN----LKDLPGAEKCFKEW-ESGCATYD 333
N+I V++N L++ A + E E GC D
Sbjct: 397 ------NVIAVVLNAYGKLQEFDKANDVYMEMQEVGCVFSD 431
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 8/211 (3%)
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+ EM+ ++ PD YTY+ + A +++M++D +V D +SNL +
Sbjct: 1 GLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-QVPGDLVLYSNLIEL 59
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPN 296
+ + KA L+ DL AY +I ++G+ E + ++ A PN
Sbjct: 60 SRKXCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPN 119
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
T SY ++ + K A F E D+ N+MI Y + G + A++L
Sbjct: 120 TT--SYSTLLTMYXENKKFLEALSVFSEMREIKCXLDLTTCNIMIDVYGQLGMAKEADKL 177
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDMKL 387
R+ G +PN ++ Y GD +L
Sbjct: 178 FWGMRKMGIEPNVVSYNTLLRVY---GDAEL 205
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 101/211 (47%), Gaps = 3/211 (1%)
Query: 101 AKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSS 158
+KV + AE F++L + S + ++++ Y K M K E +L MKE + S+
Sbjct: 551 SKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSA 610
Query: 159 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 218
+NSLM +Y++ G EK I+ E+K+S + PD Y+YN + A + A R+ E
Sbjct: 611 ATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSE 670
Query: 219 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 278
MK G + D T++ YV +FE+A ++ + + + Y ++ Y + G
Sbjct: 671 MKCSG-LKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNG 729
Query: 279 NLSEVYRIWRSLRLAFPNTANISYLNMIQVL 309
L++ +L P + N+ +V+
Sbjct: 730 KLTDAKIFVSNLPQLHPGYSKQEQQNLFEVI 760
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 115/251 (45%), Gaps = 1/251 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ +T+ SLL+ Y K ++A ++++M+ + S + +NSL++ Y K G E+ A+
Sbjct: 259 DKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALK 318
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
QEM+ + PD TY + L I A +EM R+G + T++ L ++
Sbjct: 319 QEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNG-CKPNLCTYNALIKMHGV 377
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G F + E + D+ + L+ ++GQ G SEV +++ ++ A +
Sbjct: 378 RGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDT 437
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y+++I A + +K D+ N ++ A A+ GR E AE+L
Sbjct: 438 YVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEME 497
Query: 362 RRGADPNAKTW 372
R P+ ++
Sbjct: 498 ERDCKPDEYSY 508
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 125/275 (45%), Gaps = 1/275 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY SL++ Y + + + A + ++M E + +N++++ A+ G E+ + EM
Sbjct: 437 TYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEM 496
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ PD Y+Y+ + A A + + + +++ + +W L + +
Sbjct: 497 EERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLV-KTLVLVNSKVNN 555
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+AE+A EL + D++ ++++YG+ + +V +I ++ + N + +Y +
Sbjct: 556 LAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNS 615
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
++ + L D E E +S D N +I AY ++G+++ A L + G
Sbjct: 616 LMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSG 675
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
P+ T+ IF Y+ N + A++ + + G
Sbjct: 676 LKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQG 710
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 119/273 (43%), Gaps = 4/273 (1%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY ++L+ + E+AE L +M+E + ++SL+ YA +K+ A+ ++
Sbjct: 472 TYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDI 531
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ I P ++ + + VN+++ AE+ E+ R R + D + + SIY + +
Sbjct: 532 YSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLEL-RQKRCSLDINVLNAMVSIYGKNRM 590
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
K E+ L ++ + + Y L+ +Y + G+ + I ++ + SY
Sbjct: 591 VRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNT 650
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+I + A + F E + D+ N+ + +Y E A EL +G
Sbjct: 651 VIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQG 710
Query: 365 ADPNAKTWEIFSDYYLRNG---DMKLAVDCLEK 394
PN +T+ + Y RNG D K+ V L +
Sbjct: 711 CKPNERTYNSIVEGYCRNGKLTDAKIFVSNLPQ 743
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 99/251 (39%), Gaps = 43/251 (17%)
Query: 141 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 200
+A ALL+ + G + +L++ +++ G A+ + M S + P TYNV +
Sbjct: 141 EASALLDAAPGPDAG----AYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVL 196
Query: 201 RALAAVNDISGAERV--IEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
+ + + E V + MK G VA D T++ L S L+++A + E++
Sbjct: 197 HVYSKMA-VPWKEVVELVASMKEHG-VAPDRYTYNTLISCCRRRALYKEAAQVFDEMKAS 254
Query: 259 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 318
D + L+ +YG+ E I+V+ ++ +
Sbjct: 255 GFEPDKVTFNSLLDVYGKARRHDEA----------------------IEVIQEMERV--- 289
Query: 319 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 378
GC + N +I +Y K+G LE A LK+ +G P+ T+
Sbjct: 290 ---------GCPP-SVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISG 339
Query: 379 YLRNGDMKLAV 389
R G + A+
Sbjct: 340 LDRAGKIDAAI 350
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 126/275 (45%), Gaps = 11/275 (4%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
T LLN CK+ KAE +LE + L ++ +N+L+ Y + + +I ++M
Sbjct: 337 TCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQM 396
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
K+ I PD TYN + L + I+ AE ++ EM++ G V TF+ L Y AG
Sbjct: 397 KSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSG-VDPSVETFNTLIDAYGRAGQ 455
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISY 302
EK L +++++ ++ ++ ++ + + G + E I + + PN Y
Sbjct: 456 LEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQ--VY 513
Query: 303 LNMIQVLVNLKDLPGAEKCF---KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
++I + + G E+ F ++ +S + I N+++ K +++ AEEL
Sbjct: 514 NSIIDAYI---ESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYN 570
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
+G P+ ++ GD A++ L++
Sbjct: 571 LTNQGLRPDVVSYNTIISACCNKGDTDRALELLQE 605
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 121/278 (43%), Gaps = 1/278 (0%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
+ N +TY ++++ + K E L ++M + + + +N L++ + G ++
Sbjct: 226 VAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETR 285
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
A++ EM + S++PD +TY++ L D + E + G + +T S L +
Sbjct: 286 ALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTC-SILLNG 344
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
+ G KAE+ L+ L + + Y LI Y Q +L + I+ ++
Sbjct: 345 LCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPD 404
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+I+Y +I L ++ + AE E E + N +I AY + G+LE +
Sbjct: 405 HITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLS 464
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 396
+ +G N ++ + +NG + AV L+ I
Sbjct: 465 DMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMI 502
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/358 (20%), Positives = 155/358 (43%), Gaps = 20/358 (5%)
Query: 25 LYDRLFKKGSSDVSVRQQLNQFLKSKKR---VFKWEVGDTLKKLRDRKLYYPALKLSENM 81
L+D L + G S R L+ F +S K+ + + L L A ++ E +
Sbjct: 306 LFDGLTRTGDS----RTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEML 361
Query: 82 EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP--ETSKNHLTYGSLLNCYCKELMT 139
G+ T + ++ +V+ + A + F + +H+TY +L+N CK M
Sbjct: 362 VHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMI 421
Query: 140 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 199
+AE L+ +M++ + S FN+L+ Y + G EK ++ +M+ I + ++
Sbjct: 422 TEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSV 481
Query: 200 MRALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
++A I A ++++M +D V + ++++ Y+E+G E+A ++++++
Sbjct: 482 VKAFCKNGKIPEAVAILDDMIHKD--VVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSS 539
Query: 259 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 318
+ Y L+ + + E + +L +SY +I N D A
Sbjct: 540 GVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRA 599
Query: 319 EKCFKEWESGCATYDIRVT----NVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
+ +E YDIR T + ++ A GR+ + E L + + +P++ +
Sbjct: 600 LELLQEMHK----YDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIY 653
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 53/270 (19%), Positives = 101/270 (37%), Gaps = 7/270 (2%)
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
PD+++YNV + L S A +V +EM G VA + T++ + +V+ G E R
Sbjct: 193 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRG-VAPNQITYNTMIDGHVKGGDLEAGFR 251
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
++ ++ Y L++ + G + E + + +Y + L
Sbjct: 252 LRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLT 311
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
D F E ++++ K+G++ AE++ E G P
Sbjct: 312 RTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTA 371
Query: 371 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 430
+ + Y + D++ A E+ P T + + + + AE
Sbjct: 372 IYNTLINGYCQVRDLQGAFSIFEQM------KSRHIRPDHITYNALINGLCKMEMITEAE 425
Query: 431 GFLEILKKAVDDLGVEVFEPLIRTYAAAGR 460
+ ++K+ D VE F LI Y AG+
Sbjct: 426 DLVMEMEKSGVDPSVETFNTLIDAYGRAGQ 455
>gi|224093190|ref|XP_002309826.1| predicted protein [Populus trichocarpa]
gi|222852729|gb|EEE90276.1| predicted protein [Populus trichocarpa]
Length = 1480
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 126/291 (43%), Gaps = 8/291 (2%)
Query: 108 AAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTL 167
A E + P Y +++ Y + K + LL+ M+E + FN+L+
Sbjct: 239 AVEVFMRAEPSAGNTVQVYNAMMGVYARRGRFNKVQELLDLMRERGCKPDLVSFNTLINA 298
Query: 168 YAKTG--HPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRV 225
K G P ++ E++ S + PD+ TYN + A + +++ A +V ++M+
Sbjct: 299 RLKAGAMMPNLAIELLNEVRRSGLRPDTITYNTLISACSRASNLEEAAKVFDDMEAH-HC 357
Query: 226 AADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 285
D T++ + S+Y GL KAE+ +LE+R D +Y L+ + + GN+ +V
Sbjct: 358 QPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSLLYAFAREGNVEKVKE 417
Query: 286 IWRSL-RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAY 344
IW + ++ F ++Y MI + A + +++ +S D V+I +
Sbjct: 418 IWEEMVKIGF-GKDEMTYNTMIHMYGKQGQNELALQLYRDMQSSGRNPDAVTYTVLIDSL 476
Query: 345 AKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG---DMKLAVDCL 392
K ++ A + G P KT+ Y + G + + DC+
Sbjct: 477 GKTNKIAEAAGVMSEMLNTGVKPTLKTYSALICGYAKAGKPVEAEETFDCM 527
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 118/253 (46%), Gaps = 7/253 (2%)
Query: 151 ELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM--RALAAVND 208
E + G + +N++M +YA+ G K+ ++ M+ PD ++N + R A
Sbjct: 247 EPSAGNTVQVYNAMMGVYARRGRFNKVQELLDLMRERGCKPDLVSFNTLINARLKAGAMM 306
Query: 209 ISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQ 268
+ A ++ E++R G + D T++ L S A E+A + ++E + DL Y
Sbjct: 307 PNLAIELLNEVRRSG-LRPDTITYNTLISACSRASNLEEAAKVFDDMEAHHCQPDLWTYN 365
Query: 269 FLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE 326
+I++YG+ G + +++ L R FP+ +SY +++ ++ ++ ++E
Sbjct: 366 AMISVYGRCGLSGKAEQLFNDLESRGFFPDA--VSYNSLLYAFAREGNVEKVKEIWEEMV 423
Query: 327 SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 386
D N MI Y K+G+ E A +L + G +P+A T+ + D + +
Sbjct: 424 KIGFGKDEMTYNTMIHMYGKQGQNELALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIA 483
Query: 387 LAVDCLEKAIDTG 399
A + + ++TG
Sbjct: 484 EAAGVMSEMLNTG 496
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 3/168 (1%)
Query: 109 AENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMT 166
AE F DL + ++Y SLL + +E EK + + E+M ++ G M +N+++
Sbjct: 380 AEQLFNDLESRGFFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIH 439
Query: 167 LYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA 226
+Y K G E + ++M++S PD+ TY V + +L N I+ A V+ EM G V
Sbjct: 440 MYGKQGQNELALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEAAGVMSEMLNTG-VK 498
Query: 227 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLY 274
T+S L Y +AG +AE + D AY ++ ++
Sbjct: 499 PTLKTYSALICGYAKAGKPVEAEETFDCMLRSGIRPDHLAYSVMLDIH 546
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 114/276 (41%), Gaps = 3/276 (1%)
Query: 144 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 203
++++++++ S ++ +A+ G+ ++ I MKA+ P + Y V R L
Sbjct: 869 VVVQELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYHGMKAAGYFPTMHLYRVMARLL 928
Query: 204 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 263
+ + E ++ EM+ G D + ++++ +YV F K + + ++ D
Sbjct: 929 SRGKQVRDVEAMLSEMEEAG-FKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPD 987
Query: 264 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 323
Y LI +Y + E + + +R+A +Y +++ + + AE+ F+
Sbjct: 988 EDTYNTLIVMYCRDHRPEEGFSLMHEMRVAGLEPKLDTYKSLVASFGKQQLVEQAEELFE 1047
Query: 324 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
E +S D + M+ Y G AE L + G +P T + Y +G
Sbjct: 1048 ELQSKGCKLDRSFYHTMMKIYRNSGSHSKAERLFSMMKDAGVEPTIATMHLLMVSYGSSG 1107
Query: 384 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
+ A L +TG +P S I ++R+
Sbjct: 1108 QPQEAEKVLSNLKETGSNLST--LPYSSVIDAYLRN 1141
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 74/180 (41%), Gaps = 16/180 (8%)
Query: 231 TFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGN---------LS 281
++ + +Y G F K + L + R DL ++ LI + G L+
Sbjct: 256 VYNAMMGVYARRGRFNKVQELLDLMRERGCKPDLVSFNTLINARLKAGAMMPNLAIELLN 315
Query: 282 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 341
EV R LR P+T I+Y +I +L A K F + E+ D+ N MI
Sbjct: 316 EVRR--SGLR---PDT--ITYNTLISACSRASNLEEAAKVFDDMEAHHCQPDLWTYNAMI 368
Query: 342 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRG 401
Y + G AE+L RG P+A ++ + R G+++ + E+ + G G
Sbjct: 369 SVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIGFG 428
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 87/208 (41%), Gaps = 22/208 (10%)
Query: 255 LENRNAHRDLSAYQFLITLYGQTG--NLSEVYRIWRSLRLAF-PNTANISYLNMIQVLVN 311
L++R + F++ GQ EVY W +LR + PN +S ++ VL
Sbjct: 176 LDDRKVQMTPTDLCFVVKSVGQESWHRALEVYE-WLNLRHWYSPNARMLS--TILSVLGK 232
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
A + F E A ++V N M+G YA+ GR +EL + R RG P+ +
Sbjct: 233 ANQEALAVEVFMRAEPS-AGNTVQVYNAMMGVYARRGRFNKVQELLDLMRERGCKPDLVS 291
Query: 372 WEIFSDYYLRNGDM--KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 429
+ + L+ G M LA++ L + +G P + T T + + +++ A
Sbjct: 292 FNTLINARLKAGAMMPNLAIELLNEVRRSG------LRPDTITYNTLISACSRASNLEEA 345
Query: 430 EGFLEILKKAVDDLGVEVFEPLIRTYAA 457
K DD+ +P + TY A
Sbjct: 346 -------AKVFDDMEAHHCQPDLWTYNA 366
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 60/167 (35%), Gaps = 31/167 (18%)
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
R+ +T F +L +E L +A + ++ S Y+ ++ LY + G
Sbjct: 699 RELGFTGSFTMFESLIQCCLENELITEASQVFSDMRFCGIKASESLYESMVLLYCKMG-- 756
Query: 281 SEVYRIWRSLRLAFPNTA---------------NIS-YLNMIQVLVNLKDLPGAEKCFKE 324
FP TA NIS Y+N+I+ LK AE
Sbjct: 757 -------------FPETAHHLIDFAESDGILLNNISLYVNVIEAYGRLKLWQKAESVAGN 803
Query: 325 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
C T D +V N +I AYA G E A + R G P T
Sbjct: 804 LRQRCITVDRKVWNALIEAYAASGCYERARAIFNTMMRDGPSPTVDT 850
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 130/310 (41%), Gaps = 3/310 (0%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELM 138
+ + G+ V I ++ + K ID + + +D+ + + +TY +L+N YC+E +
Sbjct: 176 IARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGL 235
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
+A ++ M L + +N+++ K G + + EM + + PD+ TYN
Sbjct: 236 LGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNT 295
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
+ N+ A+ + +M G V+ D +FS+L + G ++A ++++
Sbjct: 296 LLVESCRNNNFLEAKDIFSDMLHRG-VSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTS 354
Query: 259 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 318
D Y LI Y + G +SE I + ++Y ++ L K L A
Sbjct: 355 GLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADA 414
Query: 319 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 378
F E D +I + KEG + A L ++ P+ T+ I D
Sbjct: 415 NALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDG 474
Query: 379 YLRNGDMKLA 388
+ + +M+ A
Sbjct: 475 FCKTTEMEKA 484
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 117/265 (44%), Gaps = 1/265 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+ Y ++LN CK+ + A AL ++M E + F +L+ + K G+ K ++
Sbjct: 396 VAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGI 455
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M +I PD TYN+ + ++ A + EM ++ + +++ L + Y G
Sbjct: 456 MTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISR-KIFPNHISYAILVNGYCNLG 514
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
+A R E+ + L +I Y ++G+LS+ + +I+Y
Sbjct: 515 FVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYN 574
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I V + + A + E+ D+ NV++ + ++GR++ AE + + R
Sbjct: 575 TLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIER 634
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLA 388
G DP+ T+ + Y+ ++K A
Sbjct: 635 GIDPDRSTYTTLINGYVSQDNLKEA 659
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/357 (20%), Positives = 146/357 (40%), Gaps = 17/357 (4%)
Query: 117 PETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK 176
P+T+ TY +LL C+ +A+ + M + + F+SL+ + ++ GH ++
Sbjct: 288 PDTT----TYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQ 343
Query: 177 IPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLA 236
++MK S ++PD+ Y + + +S A + ++M G A D ++ +
Sbjct: 344 ALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQG-CALDVVAYNTIL 402
Query: 237 SIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPN 296
+ + L A E+ R D + LI + + GN+ + ++ +
Sbjct: 403 NGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIK 462
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
++Y +I ++ A + + E S + +++ Y G + A L
Sbjct: 463 PDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRL 522
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTF 416
+ R+G P T Y R+GD+ A + L K I G G P S T T
Sbjct: 523 WDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVG------PDSITYNTL 576
Query: 417 MRHFEQEKDVDGAEGFLEILKKAVDDLGVEV--FEPLIRTYAAAGRT--SPVMLRRL 469
+ F + + +D A F I K L +V + ++ + GR + ++LR++
Sbjct: 577 INGFVKGEYMDKA--FFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKM 631
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 66/135 (48%), Gaps = 1/135 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+T +++ YC+ KA+ L KM +G S+ +N+L+ + K + +K +I +
Sbjct: 536 VTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINK 595
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ + PD TYNV + + AE ++ +M G + D +T++ L + YV
Sbjct: 596 METKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERG-IDPDRSTYTTLINGYVSQD 654
Query: 244 LFEKAERALKELENR 258
++A R E+ R
Sbjct: 655 NLKEAFRFHDEMLQR 669
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 104/241 (43%), Gaps = 7/241 (2%)
Query: 162 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 221
NSL+ K G + + E+ S I + YT N+ + AL + I + + +M++
Sbjct: 154 NSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQ 213
Query: 222 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 281
G + AD T++ L + Y GL +A + + + L Y +I + G
Sbjct: 214 KG-IFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYV 272
Query: 282 E---VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 338
V+ S+ L+ P+T + L +++ N + A+ F + + D+ +
Sbjct: 273 RAKGVFNEMLSIGLS-PDTTTYNTL-LVESCRN-NNFLEAKDIFSDMLHRGVSPDLISFS 329
Query: 339 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 398
+IG ++ G L+ A + G P+ + I + Y RNG M A++ +K ++
Sbjct: 330 SLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQ 389
Query: 399 G 399
G
Sbjct: 390 G 390
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 53/107 (49%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ +TY +L+N + K +KA L+ KM+ L + +N ++ + + G ++ I+
Sbjct: 569 DSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELIL 628
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAAD 228
++M I PD TY + + +++ A R +EM + G V D
Sbjct: 629 RKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPDD 675
>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
Length = 826
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 137/337 (40%), Gaps = 11/337 (3%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TYG+++N +CK+ E + LL +MKE L S FN ++ K G + ++ M
Sbjct: 274 TYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWM 333
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
S PD TYN + + + AE ++E R G + +++ L + + G
Sbjct: 334 IESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKF-SYTPLIHAFSKNGE 392
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISY 302
+ +A L E+ R DL AY L+ G + + + R P+ ANI Y
Sbjct: 393 YVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPD-ANI-Y 450
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
++ L P A++ E T D V ++ + + G L+ A++L +
Sbjct: 451 NVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIE 510
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ 422
RG D + Y + G M A+ C ++ + G P T T + + +
Sbjct: 511 RGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFN------GVHSPDEFTYSTIIDGYVK 564
Query: 423 EKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
+ D+ GA ++ K V F LI + G
Sbjct: 565 QNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNG 601
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 111/275 (40%), Gaps = 1/275 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +Y L++ + K +A LL +M E + + +L+ G + +
Sbjct: 376 NKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVR 435
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+M I+PD+ YNV M L A++++ EM D V D + L ++
Sbjct: 436 DKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEM-LDQNVTPDAFVNATLVDGFIR 494
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G ++A++ + R + +I Y + G +++ ++ + + +
Sbjct: 495 HGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFT 554
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I V DL GA + F ++ +I + + G L AE++ E R
Sbjct: 555 YSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMR 614
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 396
G +PN T+ I Y+ + G + A E+ +
Sbjct: 615 SFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQML 649
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 133/343 (38%), Gaps = 27/343 (7%)
Query: 134 CKELMTEKAEALLEKMKELNLGFSSMP----FNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
CKE E+ L+EK G +P +N+L+ Y K G E+ + +E+K
Sbjct: 213 CKEGKVEEGRHLIEK----RWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGF 268
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
+P TY + A ++++ EMK G +A F+ + + G +A
Sbjct: 269 LPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERG-LAVSLQIFNGIIDARFKHGCEIEAA 327
Query: 250 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEV-----YRIWRSLRLAFPNTANISYLN 304
A++ + D++ Y LI G + E + I R L FPN SY
Sbjct: 328 DAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGL---FPN--KFSYTP 382
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+I + A + E T D+ ++ G ++ A ++++ RG
Sbjct: 383 LIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERG 442
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 424
P+A + + + G A L + +D P + T + F +
Sbjct: 443 ILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQ------NVTPDAFVNATLVDGFIRHG 496
Query: 425 DVDGAEGFLEI-LKKAVDDLGVEVFEPLIRTYAAAGRTSPVML 466
++D A+ ++ +++ +D VE +I+ Y G + +L
Sbjct: 497 NLDEAKKLFQLTIERGIDTSVVEC-NAMIKGYCKYGMMNDALL 538
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 93/235 (39%), Gaps = 25/235 (10%)
Query: 162 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 221
NSL+ L G E + EM + D+YT + + L + +IE KR
Sbjct: 171 NSLLNLLVHHGKVEIARKVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHLIE--KR 228
Query: 222 DGRVAADWTTFSN-LASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
G+ F N L Y + G E+A KEL+ + + Y +I + + G
Sbjct: 229 WGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKF 288
Query: 281 SEVYRIWRSLR---LAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE------W--ESGC 329
V ++ ++ LA +Q+ + D C E W ESGC
Sbjct: 289 EAVDKLLVEMKERGLAVS----------LQIFNGIIDARFKHGCEIEAADAVRWMIESGC 338
Query: 330 ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 384
D+ N +I +G++ AEEL E A RRG PN ++ + +NG+
Sbjct: 339 EP-DMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGE 392
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 70/162 (43%), Gaps = 1/162 (0%)
Query: 228 DWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW 287
D S+L + +F++ E L+ ++++ A F+I+ Y +G + E ++
Sbjct: 95 DGFVCSSLLKLLARFRVFKEIENLLETMKSKELIPTCEALSFVISAYAGSGLVKEALELY 154
Query: 288 RSLRLAFPNTANISYLN-MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAK 346
++ ++ N ++ +LV+ + A K + E D ++ K
Sbjct: 155 NTVIDVHNCVPDVFACNSLLNLLVHHGKVEIARKVYDEMVDRNGDVDNYTVCIVTKGLCK 214
Query: 347 EGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 388
EG++E L E+ +G PN + D Y +NGD++ A
Sbjct: 215 EGKVEEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERA 256
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Query: 116 LPETSK-NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP 174
L +T K N +T+ SL+N +C+ +AE + E+M+ + + + L+ + K G
Sbjct: 579 LKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKL 638
Query: 175 EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDIS 210
K ++M + +P+ T+N + L N I+
Sbjct: 639 TKACFFFEQMLINKCIPNDATFNYLVNGLTNNNGIA 674
>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
Length = 475
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 110/256 (42%), Gaps = 5/256 (1%)
Query: 141 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 200
K EA+ E+MK NL ++S++ Y + G+ + + E + I P+ +TY +
Sbjct: 155 KVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALI 214
Query: 201 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 260
+ + AE ++ +M+ G V + F+ + Y + +KA +E
Sbjct: 215 NGFCKIGQMEAAEMLVTDMQVRG-VGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGI 273
Query: 261 HRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGA 318
D+ Y L + + E + R + + PN ++SY +I + N D+ A
Sbjct: 274 ELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPN--HVSYTTLISIHCNEGDMVEA 331
Query: 319 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 378
+ F+E A + NVM+ Y K+G + AE K ++G P+ ++
Sbjct: 332 RRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHG 391
Query: 379 YLRNGDMKLAVDCLEK 394
+ NG + +A+ E+
Sbjct: 392 HCVNGKVDVALRLFEE 407
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 108/251 (43%), Gaps = 1/251 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N TYG+L+N +CK E AE L+ M+ +G + + FN+++ Y + +K I
Sbjct: 206 NEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIK 265
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M+ I D YTYN L N + A+ ++ M G V + +++ L SI+
Sbjct: 266 MIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKG-VRPNHVSYTTLISIHCN 324
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G +A R +E+ A L Y ++ Y + G++ E R + S
Sbjct: 325 EGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYS 384
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y ++ + A + F+E + + ++ +I AKEGR E A +L +
Sbjct: 385 YAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNML 444
Query: 362 RRGADPNAKTW 372
G P+ +
Sbjct: 445 GDGLTPDDALY 455
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 116/292 (39%), Gaps = 7/292 (2%)
Query: 94 AIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELN 153
A HLD A D + P+ S L+ +++ YCK A LL++M
Sbjct: 44 AGHLDTAA-----DLLKQAATSCPD-SVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHG 97
Query: 154 LGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAE 213
+ +++ +NSL+ Y + +++ +++ M+ I P TY + + L+A DI+ E
Sbjct: 98 VKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVE 157
Query: 214 RVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITL 273
V EEMK ++ D +S++ + Y AG +A E + Y LI
Sbjct: 158 AVFEEMKSK-NLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALING 216
Query: 274 YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYD 333
+ + G + + +++ I + MI + A + E D
Sbjct: 217 FCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELD 276
Query: 334 IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 385
+ N + + R++ A+ L +G PN ++ + GDM
Sbjct: 277 VYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDM 328
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 3/177 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
AL++ MEK G+ V + + +D A+N + E NH++Y +L++
Sbjct: 261 ALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLIS 320
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C E +A L +M S + +N +M Y K G + EM+ ++P
Sbjct: 321 IHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVP 380
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
D Y+Y + + A R+ EEMK+ G + ++ L S + G E+A
Sbjct: 381 DIYSYAALVHGHCVNGKVDVALRLFEEMKQRGS-KPNLVAYTALISGLAKEGRSEEA 436
>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
Length = 795
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 138/315 (43%), Gaps = 7/315 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL+L + ME RGM V + + +V IDAA + ++ S N TY +L+
Sbjct: 344 ALELKQEMEFRGMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIK 403
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ + A+ + ++ + +N+L++++ + G ++ + +EMK + +P
Sbjct: 404 LHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIP 463
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ TY + + + A + + M G + D +T++ + S G +E+AE+
Sbjct: 464 ERDTYVSLISSYSRCGLFDQAMEIYKRMIEAG-IYPDISTYNAVLSALARGGRWEQAEKL 522
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
E+ +R+ D +Y L+ Y L ++ + + N +L VLVN
Sbjct: 523 FAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIYAERIERHN--WLVKTLVLVN 580
Query: 312 --LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
+ +LP EK F+E + DI V N M+ Y K ++ EE+ + +A
Sbjct: 581 NKVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLSLMMENSINHSA 640
Query: 370 KTWEIFSDYYLRNGD 384
T+ Y R GD
Sbjct: 641 ATYNSLMHMYSRLGD 655
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 115/249 (46%), Gaps = 1/249 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+T+ SLL+ Y K E+A +L++M+ S + +NSL++ Y K G E+ + QE
Sbjct: 291 VTFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQE 350
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ + PD TY + L V I A EM R+G + + T++ L ++ G
Sbjct: 351 MEFRGMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRNG-CSPNLCTYNALIKLHGVRG 409
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
F + +L + D+ + L++++GQ G SEV +++ ++ A +Y+
Sbjct: 410 KFTEMMAVFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYV 469
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
++I A + +K DI N ++ A A+ GR E AE+L R
Sbjct: 470 SLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDR 529
Query: 364 GADPNAKTW 372
P+ ++
Sbjct: 530 DCKPDELSY 538
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 132/298 (44%), Gaps = 29/298 (9%)
Query: 25 LYDRLFKKG-SSDVSVRQQLNQFLKSKKRVFKWEVGDTL-KKLRDRKL------YYPALK 76
+Y R+ + G D+S N L + R +WE + L ++ DR Y L
Sbjct: 487 IYKRMIEAGIYPDIST---YNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLH 543
Query: 77 LSENMEKRGMNKTVSDQAIHLDLVAK----VQGIDAAENYFVDLPETSKNHL-------- 124
N +K KT+S+ I+ + + + V+ + N +LPET K
Sbjct: 544 AYANAKKLDKMKTLSED-IYAERIERHNWLVKTLVLVNNKVNNLPETEKAFQELRRRRCS 602
Query: 125 ----TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
++++ Y K M +K E +L M E ++ S+ +NSLM +Y++ G EK +I
Sbjct: 603 LDINVLNAMVSIYGKNKMVKKVEEVLSLMMENSINHSAATYNSLMHMYSRLGDCEKCESI 662
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
+ E+K+S + PD Y+YN + A + A R+ EMK G V D T++ YV
Sbjct: 663 LTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSG-VKPDIVTYNIFIKSYV 721
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
+FE+A ++ L + + + ++ Y + G + E +L +P +
Sbjct: 722 ANIMFEEAIDLVRYLVTQGCRPNERTFNSILQGYSRHGRMVEAKSFLSNLPKIYPGIS 779
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 113/260 (43%), Gaps = 4/260 (1%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEM 184
Y +L++ + + A A+ ++M + + + + +N + Y+K P +++ A++ M
Sbjct: 187 YTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKMSVPWKEVVALVDSM 246
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
K I D YTYN + A +V +EMK G D TF++L +Y +A
Sbjct: 247 KEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAG-FEPDKVTFNSLLDVYGKARK 305
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
E+A LK +EN + Y LI+ Y + G L E + + + ++Y
Sbjct: 306 HEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTT 365
Query: 305 MIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I L + + A + E +GC+ ++ N +I + G+ + + R
Sbjct: 366 LISGLDRVGKIDAALATYSEMVRNGCSP-NLCTYNALIKLHGVRGKFTEMMAVFDDLRSA 424
Query: 364 GADPNAKTWEIFSDYYLRNG 383
G P+ TW + +NG
Sbjct: 425 GYVPDVVTWNTLLSVFGQNG 444
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 96/241 (39%), Gaps = 39/241 (16%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERV--IEE 218
+ +L++ +++ G A+ Q M + P TYNV A + ++ + E V ++
Sbjct: 187 YTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKMS-VPWKEVVALVDS 245
Query: 219 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 278
MK DG + D T++ L S GL +A + E++ D + L+ +YG+
Sbjct: 246 MKEDG-IERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYGKAR 304
Query: 279 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 338
E I VL +++ +GC T + N
Sbjct: 305 KHEEA----------------------IGVLKRMEN------------AGC-TPSVVTYN 329
Query: 339 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 398
+I AY K+G LE A ELK+ RG P+ T+ R G + A+ + +
Sbjct: 330 SLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRN 389
Query: 399 G 399
G
Sbjct: 390 G 390
>gi|168002263|ref|XP_001753833.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694809|gb|EDQ81155.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 779
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 138/342 (40%), Gaps = 40/342 (11%)
Query: 62 LKKLRDRKLYYPALKLSENMEKRGMNKTVSD-QAIHLDLVAKVQGIDAAENYFVDLP--E 118
++ R + AL+L + M++ K I + ++ + +D A F D+P +
Sbjct: 45 FREFAQRSDWQKALRLFKYMQRHQWCKPNEHVYTIMIGIMGREGMLDKASELFEDMPLND 104
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTG-HPEKI 177
N ++ +L+N Y + E + LL +MK + + + +N+++ AK G E +
Sbjct: 105 VEWNVYSFTALINAYGRNGQHEASLHLLARMKREKVTPNLITYNTVINACAKGGLEWEGL 164
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
+ +M+ I PD TYN + A ++ + A V M G V D T++ L
Sbjct: 165 LGLFAQMRHEGIQPDIITYNTLLSACSSRGLVEEAGMVFRTMNEAG-VVPDSITYNALVD 223
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
IY +A E L+E+E D+ AY LI YG+ G YR
Sbjct: 224 IYGQADRHEGVGELLREMEQAGNAPDVVAYNILIEAYGRAGK----YR------------ 267
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
A K FK+ + T D+ + ++ AY K G + L
Sbjct: 268 -------------------AAAKMFKQMQEAGCTPDVVTFSTLLEAYGKHGCYDEVRLLF 308
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +P+ T+ + + G + +++ +D G
Sbjct: 309 TDMKERGTEPDVNTYNTLIQVFGQGGFFQESINLFWDLLDGG 350
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 102/261 (39%), Gaps = 38/261 (14%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +LL+ + E+A + M E + S+ +N+L+ +Y + E + +++E
Sbjct: 181 ITYNTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSITYNALVDIYGQADRHEGVGELLRE 240
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ + PD YN+ + A A ++ ++M+ G D TFS L Y + G
Sbjct: 241 MEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQEAG-CTPDVVTFSTLLEAYGKHG 299
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE--------------------- 282
+++ +++ R D++ Y LI ++GQ G E
Sbjct: 300 CYDEVRLLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQESINLFWDLLDGGVEPDMSTYA 359
Query: 283 --------------VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ES 327
+I R + ++ + +I N A F ES
Sbjct: 360 GLLYSCGKGGLHKAAKKIHRHMLQSYVTPTTDGFTGLITAYGNAALYSEATYAFNSMKES 419
Query: 328 GCATYDIRVTNVMIGAYAKEG 348
GC D+ N +IGA+A G
Sbjct: 420 GCKP-DLETYNALIGAHAGGG 439
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 98/250 (39%), Gaps = 3/250 (1%)
Query: 77 LSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYC 134
L +M++RG V+ + + + + N F DL + + TY LL
Sbjct: 307 LFTDMKERGTEPDVNTYNTLIQVFGQGGFFQESINLFWDLLDGGVEPDMSTYAGLLYSCG 366
Query: 135 KELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSY 194
K + + A+ + M + + ++ F L+T Y + MK S PD
Sbjct: 367 KGGLHKAAKKIHRHMLQSYVTPTTDGFTGLITAYGNAALYSEATYAFNSMKESGCKPDLE 426
Query: 195 TYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE 254
TYN + A A A M +G ++AD +T+++L + GLF+ A ++
Sbjct: 427 TYNALIGAHAGGGLYCEAGSAYLTMIDEG-ISADVSTYNSLIEAFGRGGLFDDAIEFSRD 485
Query: 255 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 314
+E + Y+ L+ +Y G E + L++ + SY ++ V
Sbjct: 486 MEEARCSPNRHTYEALMGVYCTAGLFDEAKAQFLDLQVGGELPSVDSYCLLLSVCARRNR 545
Query: 315 LPGAEKCFKE 324
A K +E
Sbjct: 546 WDDASKVLEE 555
>gi|242083798|ref|XP_002442324.1| hypothetical protein SORBIDRAFT_08g018230 [Sorghum bicolor]
gi|241943017|gb|EES16162.1| hypothetical protein SORBIDRAFT_08g018230 [Sorghum bicolor]
Length = 647
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 135/310 (43%), Gaps = 6/310 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDA--AENYFVDLPE--TSKNHLTYGSL 129
A+ + E+M+ G+ T +D K G+D YF + + + T+ SL
Sbjct: 42 AMGVLESMKGAGLRPTTVSYNAVIDACGK-GGVDLRFTLGYFRQMLQDGLCPDRKTFNSL 100
Query: 130 LNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
L + E A + ++M L G +N+ + K G+ E ++ +M+A++I
Sbjct: 101 LAACSRAGHLEDARTVFDEMIHLGSGRDIYTYNTFVDAICKCGNMELATQVVLDMEANNI 160
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
P+ TY+ M + + A ++ E+MK G + D ++ L +IYV+ G +++
Sbjct: 161 KPNVVTYSTLMDGFSKLEKYDEALKLREKMKSLG-IQLDRVCYNTLLAIYVKTGKYDEIA 219
Query: 250 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 309
+++EN +D Y LI YG+ G L V + + +R + ++Y +I +
Sbjct: 220 TVCEDMENLGIEKDTVTYNSLINGYGKQGRLDMVAFLVQDMRAQGVAPSVLTYSTLIDIY 279
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
A + +++ D+ + + I AK G +E A L + + G PN
Sbjct: 280 SKAGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLAKNGLVECALSLLDEMIKMGIKPNV 339
Query: 370 KTWEIFSDYY 379
T+ D +
Sbjct: 340 VTYNTIIDAF 349
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 98/227 (43%), Gaps = 16/227 (7%)
Query: 67 DRKLYYPALKLSENMEKRGMNKTVSDQAIHL-------------DLVAKVQGIDAAENYF 113
DRK + L +TV D+ IHL D + K ++ A
Sbjct: 93 DRKTFNSLLAACSRAGHLEDARTVFDEMIHLGSGRDIYTYNTFVDAICKCGNMELATQVV 152
Query: 114 VDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKT 171
+D+ + N +TY +L++ + K ++A L EKMK L + + +N+L+ +Y KT
Sbjct: 153 LDMEANNIKPNVVTYSTLMDGFSKLEKYDEALKLREKMKSLGIQLDRVCYNTLLAIYVKT 212
Query: 172 GHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTT 231
G ++I + ++M+ I D+ TYN + + ++++M+ G VA T
Sbjct: 213 GKYDEIATVCEDMENLGIEKDTVTYNSLINGYGKQGRLDMVAFLVQDMRAQG-VAPSVLT 271
Query: 232 FSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 278
+S L IY +AG+ A + + D+ + I + G
Sbjct: 272 YSTLIDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLAKNG 318
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/261 (19%), Positives = 106/261 (40%), Gaps = 2/261 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP-AIIQ 182
+ +L++ Y + + +A +LE MK L +++ +N+++ K G + +
Sbjct: 24 FAHSALISAYARSGLATEAMGVLESMKGAGLRPTTVSYNAVIDACGKGGVDLRFTLGYFR 83
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
+M + PD T+N + A + + A V +EM G D T++ +
Sbjct: 84 QMLQDGLCPDRKTFNSLLAACSRAGHLEDARTVFDEMIHLGS-GRDIYTYNTFVDAICKC 142
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY 302
G E A + + ++E N ++ Y L+ + + E ++ ++ + Y
Sbjct: 143 GNMELATQVVLDMEANNIKPNVVTYSTLMDGFSKLEKYDEALKLREKMKSLGIQLDRVCY 202
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
++ + V ++ E+ D N +I Y K+GRL+ L + R
Sbjct: 203 NTLLAIYVKTGKYDEIATVCEDMENLGIEKDTVTYNSLINGYGKQGRLDMVAFLVQDMRA 262
Query: 363 RGADPNAKTWEIFSDYYLRNG 383
+G P+ T+ D Y + G
Sbjct: 263 QGVAPSVLTYSTLIDIYSKAG 283
>gi|302781572|ref|XP_002972560.1| hypothetical protein SELMODRAFT_32515 [Selaginella moellendorffii]
gi|300160027|gb|EFJ26646.1| hypothetical protein SELMODRAFT_32515 [Selaginella moellendorffii]
Length = 341
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 130/300 (43%), Gaps = 13/300 (4%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N TY +++ YC++ T +A ALLE MK + ++ +N ++T K G ++ ++
Sbjct: 3 NAFTYSTIVRGYCEDGETRQALALLEHMKNAEVPANAKLYNIILTHLCKHGKEKEALDLL 62
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK-RDGRVAADWTTFSNLASIYV 240
M +S PD YTYN+ + AL V + A+ ++E M+ RD D T++ L
Sbjct: 63 HSMATTSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQARD--CPTDIVTYNTLIHGLC 120
Query: 241 EAG----LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPN 296
G E+A R +E+ ++ Y +I + + ++ L L N
Sbjct: 121 RKGNGRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKV---LDLMHEN 177
Query: 297 TAN---ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
++Y +I + A F E + D+ N ++ + K G++E A
Sbjct: 178 GCAFDLVTYNMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSVVDGFCKAGKVEEA 237
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETI 413
+L + RG PN +T+ +D L+ G M+ A L + G D +V TI
Sbjct: 238 NKLFAEMKARGIFPNGRTYTSITDACLKAGRMQDAHAYLVEMRKEGLVDAISYVALISTI 297
>gi|297795313|ref|XP_002865541.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311376|gb|EFH41800.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 711
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 126/279 (45%), Gaps = 9/279 (3%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
T S+++ T +AEAL E++++ + + +N+L+ Y KTG + ++ EM
Sbjct: 308 TLVSIISALANSGRTLEAEALFEELRQSGIKPRTKAYNALLKGYVKTGPLKDAELMVSEM 367
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ + PD +TY++ + A A V++EM+ G V + FS L + Y + G
Sbjct: 368 EKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEME-TGDVQPNSFVFSRLLAGYRDRGE 426
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
++K + LKE+++ D Y +I +G+ L + + +++
Sbjct: 427 WQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNT 486
Query: 305 MIQVLVNLKDLPGAEKCFKEWES----GCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
+I AE+ F+ E CAT N+MI +Y + R ++ + L +
Sbjct: 487 LIDCHCKHGRHIVAEEMFEAMERRGCLPCAT----TYNIMINSYGDQERWDDMKRLLGKM 542
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ +G PN T D Y ++G A++CLE+ G
Sbjct: 543 KSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVG 581
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 133/319 (41%), Gaps = 7/319 (2%)
Query: 141 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 200
+A LL + L + S+++ A +G + A+ +E++ S I P + YN +
Sbjct: 289 RALQLLGMAQATGLSAKTATLVSIISALANSGRTLEAEALFEELRQSGIKPRTKAYNALL 348
Query: 201 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 260
+ + AE ++ EM++ G V+ D T+S L YV AG +E A LKE+E +
Sbjct: 349 KGYVKTGPLKDAELMVSEMEKRG-VSPDEHTYSLLIDAYVNAGRWESARIVLKEMETGDV 407
Query: 261 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 320
+ + L+ Y G + +++ + ++ Y +I L A
Sbjct: 408 QPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMT 467
Query: 321 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 380
F S D N +I + K GR AEE+ E RRG P A T+ I + Y
Sbjct: 468 TFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSY- 526
Query: 381 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 440
GD + D +++ + + G +P+ T T + + + + A LE +K
Sbjct: 527 --GDQE-RWDDMKRLLGKMKSQG--ILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVG 581
Query: 441 DDLGVEVFEPLIRTYAAAG 459
++ LI YA G
Sbjct: 582 LKPSSTMYNALINAYAQRG 600
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 102/237 (43%), Gaps = 5/237 (2%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
S + TY L++ Y E A +L++M+ ++ +S F+ L+ Y G +K
Sbjct: 372 VSPDEHTYSLLIDAYVNAGRWESARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEWQKTF 431
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+++EMK+ + PD YNV + N + A + M +G + D T++ L
Sbjct: 432 QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEG-IEPDRVTWNTLIDC 490
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPN 296
+ + G AE + +E R + Y +I YG ++ R+ ++ PN
Sbjct: 491 HCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPN 550
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
+++ ++ V A +C +E +S + N +I AYA+ G E A
Sbjct: 551 V--VTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQA 605
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 123/311 (39%), Gaps = 31/311 (9%)
Query: 162 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 221
N ++ +AK+G P + ++ +A+ + + T + ALA AE + EE+++
Sbjct: 275 NDIIMGFAKSGDPSRALQLLGMAQATGLSAKTATLVSIISALANSGRTLEAEALFEELRQ 334
Query: 222 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 281
G + ++ L YV+ G + AE + E+E R D Y LI Y G
Sbjct: 335 SG-IKPRTKAYNALLKGYVKTGPLKDAELMVSEMEKRGVSPDEHTYSLLIDAYVNAGR-- 391
Query: 282 EVYRIWRSLRLAF---------PNTANISYLNMIQVLVNLKDLPGAEKCF---KEWESGC 329
W S R+ PN+ S ++L +D +K F KE +S
Sbjct: 392 -----WESARIVLKEMETGDVQPNSFVFS-----RLLAGYRDRGEWQKTFQVLKEMKSIG 441
Query: 330 ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 389
D + NV+I + K L++A +R G +P+ TW D + ++G +A
Sbjct: 442 VKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAE 501
Query: 390 DCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFE 449
+ E G +P + T + + ++ D + L +K V
Sbjct: 502 EMFEAMERRG------CLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHT 555
Query: 450 PLIRTYAAAGR 460
L+ Y +GR
Sbjct: 556 TLVDVYGKSGR 566
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 103/244 (42%), Gaps = 7/244 (2%)
Query: 142 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 201
A A++ +++ NL FS S+ L G EK+ + ++ P TYN +
Sbjct: 152 AYAVVSWLQKHNLCFSYELLYSI--LIHALGRSEKLYEAFLLSQKQTLTP--LTYNALIG 207
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA--ERALKELENRN 259
A A NDI A +I M++DG +D+ +S + + +R KE+E
Sbjct: 208 ACARNNDIEKALNLISRMRQDG-YQSDFVNYSLVIQSLTRCNKIDSVMLQRLYKEIERDK 266
Query: 260 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 319
D+ +I + ++G+ S ++ + + + +++I L N AE
Sbjct: 267 LELDVQLVNDIIMGFAKSGDPSRALQLLGMAQATGLSAKTATLVSIISALANSGRTLEAE 326
Query: 320 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 379
F+E + N ++ Y K G L++AE + +RG P+ T+ + D Y
Sbjct: 327 ALFEELRQSGIKPRTKAYNALLKGYVKTGPLKDAELMVSEMEKRGVSPDEHTYSLLIDAY 386
Query: 380 LRNG 383
+ G
Sbjct: 387 VNAG 390
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y +L+N Y + ++E+A M L S + NSL+ + + + A++Q MK
Sbjct: 589 YNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMK 648
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
+ + PD TY M+AL V+ V EEM G
Sbjct: 649 ENGVKPDVVTYTTLMKALIRVDKFQKVPGVYEEMIMSG 686
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +T+ +L++ Y K A LE+MK + L SS +N+L+ YA+ G E+
Sbjct: 550 NVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAF 609
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+ M + + P N + A + A V++ MK +G V D T++ L +
Sbjct: 610 RVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENG-VKPDVVTYTTLMKALIR 668
Query: 242 AGLFEKAERALKEL 255
F+K +E+
Sbjct: 669 VDKFQKVPGVYEEM 682
>gi|357122161|ref|XP_003562784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Brachypodium distachyon]
Length = 791
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 138/314 (43%), Gaps = 7/314 (2%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY SL++ Y + + ++A + ++M E + +N++++ A+ G E+ + EM
Sbjct: 459 TYVSLISSYSRCGLFDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEM 518
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ PD +Y+ + A A + + + E++ + R+ + L + +
Sbjct: 519 ENLDSRPDELSYSSLLHAYANAKKLDKMKSLSEDIYAE-RIESHNGLVKTLVLVNSKVNN 577
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
E+A EL R D++ +I++YG+ G + +V I ++ + N + +Y +
Sbjct: 578 LSDTEKAFLELRRRRCSLDINVLNAMISIYGKNGMVKKVEEILSLMKESSINLSTATYNS 637
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
++ + L D E E +S A D N MI AY ++G+++ A L + G
Sbjct: 638 LMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKCSG 697
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 424
P+ T+ IF Y+ N + A+D + + G P+ T T ++ +
Sbjct: 698 LVPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTHG------CKPNERTYNTILQEYCSHG 751
Query: 425 DVDGAEGFLEILKK 438
+ + F+ L +
Sbjct: 752 RIADGKSFISNLPE 765
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 89/184 (48%), Gaps = 3/184 (1%)
Query: 101 AKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSS 158
+KV + E F++L S + ++++ Y K M +K E +L MKE ++ S+
Sbjct: 573 SKVNNLSDTEKAFLELRRRRCSLDINVLNAMISIYGKNGMVKKVEEILSLMKESSINLST 632
Query: 159 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 218
+NSLM +Y++ G EK I+ E+K+S PD Y+YN + A + A R+ E
Sbjct: 633 ATYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASRLFSE 692
Query: 219 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 278
MK G V D T++ YV +FE+A ++ + + Y ++ Y G
Sbjct: 693 MKCSGLV-PDIVTYNIFVKSYVANSMFEEAIDLVRYMVTHGCKPNERTYNTILQEYCSHG 751
Query: 279 NLSE 282
+++
Sbjct: 752 RIAD 755
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 107/233 (45%), Gaps = 1/233 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+T SLL+ Y K ++A +L++M++ S + +NSL++ Y K G E+ + +E
Sbjct: 283 VTLNSLLDVYGKARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEE 342
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ I PD TY + L I A EM R+G + T++ L ++ G
Sbjct: 343 MEVKGIEPDVITYTTLVSGLDRAGKIDAAIGTYNEMLRNG-CKPNLCTYNALIKLHGVRG 401
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
F + E+ + D+ + L+ ++GQ G +EV +++ ++ + +Y+
Sbjct: 402 KFPEMMIVFDEIRSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYV 461
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
++I A + +K DI N ++ A A+ GR E AE+L
Sbjct: 462 SLISSYSRCGLFDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKL 514
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 108/259 (41%), Gaps = 1/259 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY +L++C + + ++A + ++M+ + NSL+ +Y K ++ +++EM
Sbjct: 249 TYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYGKARRYDEAIGVLKEM 308
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ P TYN + + + A ++ EEM+ G + D T++ L S AG
Sbjct: 309 EQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKG-IEPDVITYTTLVSGLDRAGK 367
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+ A E+ +L Y LI L+G G E+ ++ +R A +++
Sbjct: 368 IDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFDEIRSAGFVPDVVTWNT 427
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
++ V FKE + + +I +Y++ G + A E+ +R G
Sbjct: 428 LLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAG 487
Query: 365 ADPNAKTWEIFSDYYLRNG 383
P+ T+ R G
Sbjct: 488 IHPDISTYNAVLSALARGG 506
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 140/334 (41%), Gaps = 17/334 (5%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEM 184
Y +L++ + A A+ +M + + + +N ++ +Y+K P +++ A++ M
Sbjct: 179 YTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVLALVDSM 238
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ I D YTYN + A +V +EM+ G D T ++L +Y +A
Sbjct: 239 RKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAG-FEPDKVTLNSLLDVYGKARR 297
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+++A LKE+E + Y LI+ Y + G L E ++ + + I+Y
Sbjct: 298 YDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVITYTT 357
Query: 305 MIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
++ L + A + E +GC ++ N +I + G+ + + R
Sbjct: 358 LVSGLDRAGKIDAAIGTYNEMLRNGCKP-NLCTYNALIKLHGVRGKFPEMMIVFDEIRSA 416
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQE 423
G P+ TW + +NG ++ +G +VP +T + + + +
Sbjct: 417 GFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSG------YVPERDTYVSLISSYSRC 470
Query: 424 KDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAA 457
D A +EI K+ + + G+ P I TY A
Sbjct: 471 GLFDQA---MEIYKRMI-EAGI---HPDISTYNA 497
>gi|255660840|gb|ACU25589.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 418
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 120/267 (44%), Gaps = 9/267 (3%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
+ L++ +CKE A+++ + + + L S + FN+LM Y K G ++ + M
Sbjct: 139 FNILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKSAMH 198
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
AS + PD YTY+V + L + + A ++ +EM G V + TF+ L + + G
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLV-PNGVTFTTLIDGHCKNGKL 257
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
+ A K++ ++ D Y LI + G+L + + + + I+Y +
Sbjct: 258 DLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTL 317
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV----MIGAYAKEGRLENAEELKERAR 361
I DL A E+ +IR+ +V +I KEGR +AE++
Sbjct: 318 IDGSCKEGDLETAF----EYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLREML 373
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLA 388
G P+ T+ I + +NGD+K+
Sbjct: 374 SVGLKPDTGTYTIVMHEFCKNGDVKMG 400
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 1/166 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY L+N CKE ++A L ++M + L + + F +L+ + K G + I ++M
Sbjct: 208 TYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQM 267
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ PD TYN + L D+ A+ + +EM G + D T++ L + G
Sbjct: 268 LSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKG-LKPDKITYTTLIDGSCKEGD 326
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
E A K + N D +Y LI+ + G + ++ R +
Sbjct: 327 LETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLREM 372
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 54/106 (50%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ +TY +L++ CKE E A ++M + N+ + + +L++ K G ++
Sbjct: 310 DKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKML 369
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAA 227
+EM + + PD+ TY + M D+ ++++EM+RDG V
Sbjct: 370 REMLSVGLKPDTGTYTIVMHEFCKNGDVKMGSKLLKEMQRDGHVPC 415
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/199 (20%), Positives = 84/199 (42%), Gaps = 5/199 (2%)
Query: 194 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 253
Y +N+ M +I A+ V + + + G + +F+ L + Y++ G ++ R
Sbjct: 137 YFFNILMDRFCKEGEIRLAQSVFDGITKWG-LRPSVVSFNTLMNGYIKLGDLDEGFRLKS 195
Query: 254 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVN 311
+ D+ Y LI + + E ++++ + R PN +++ +I
Sbjct: 196 AMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPN--GVTFTTLIDGHCK 253
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
L A + +K+ S + D N +I K+G L A++L + +G P+ T
Sbjct: 254 NGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKIT 313
Query: 372 WEIFSDYYLRNGDMKLAVD 390
+ D + GD++ A +
Sbjct: 314 YTTLIDGSCKEGDLETAFE 332
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 94/215 (43%), Gaps = 15/215 (6%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
+L M G+ V ++ ++ + K +D A F ++ + N +T+ +L++
Sbjct: 190 GFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLID 249
Query: 132 CYCKELMTEKAEALLEKMKELNLGFS--SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
+CK + A + ++M L+ GFS + +N+L+ K G + + EM +
Sbjct: 250 GHCKNGKLDLAMEIYKQM--LSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGL 307
Query: 190 MPDSYTYNVWMRALAAVNDISGA----ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
PD TY + D+ A +R+I+E + D +++ L S + G
Sbjct: 308 KPDKITYTTLIDGSCKEGDLETAFEYRKRMIKE-----NIRLDDVSYTALISGLCKEGRS 362
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
AE+ L+E+ + D Y ++ + + G++
Sbjct: 363 VDAEKMLREMLSVGLKPDTGTYTIVMHEFCKNGDV 397
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 66/158 (41%), Gaps = 13/158 (8%)
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+S+ ++ + L DL + + D+ +V+I KE +++ A +L +
Sbjct: 172 VSFNTLMNGYIKLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDE 231
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
RG PN T+ D + +NG + LA++ ++ + G + P T T +
Sbjct: 232 MLDRGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQMLSQG------FSPDXITYNTLIYG 285
Query: 420 FEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAA 457
++ D+ A K D++ ++ +P TY
Sbjct: 286 LCKKGDLXQA-------KDLXDEMSMKGLKPDKITYTT 316
>gi|168049701|ref|XP_001777300.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671276|gb|EDQ57830.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 291
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 123/267 (46%), Gaps = 12/267 (4%)
Query: 97 LDLVAKVQGIDAAENYFVDLPET-SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLG 155
+D + +D A+ F D+ ++ K+ + Y SLL+ YCK E A L MK+ +
Sbjct: 18 IDTLGSSGCLDLAKKIFSDMDDSVKKDTVLYNSLLHAYCKSGQVETANELFNSMKQKDCR 77
Query: 156 FSSMPFNSLMTLYAKTG-HPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAER 214
+N++M +Y KT K+ ++ +EM I PD +Y++ + A A + A+R
Sbjct: 78 PDLSTYNTIMNMYVKTDVGLTKVLSLFKEMCLQGIQPDVVSYDILLAACAPKQHVKEAQR 137
Query: 215 VIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER---ALKELENRNAHRDLSAYQFLI 271
+ + MK+ + T+++L ++Y AG++ + E+ ++ + LI
Sbjct: 138 IFDTMKKRRGIKPTVVTYTSLITVYANAGIYSSPNQLCPLFGEMVAEKCQPNVKTFTSLI 197
Query: 272 TLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCA 330
+ G++ E I+ +++ ++Y +I V + GA++ F + +SG
Sbjct: 198 NSCRKGGHVEEAQTIFEAMKEYGVKPNVVTYNALINVYTERGEQDGAQRVFLQMVQSGLQ 257
Query: 331 TYDIRVTNVM-----IGAYAKEGRLEN 352
+ T +M GA+ KE +N
Sbjct: 258 PTGVSFTVLMSSFKATGAF-KEASFQN 283
>gi|255660842|gb|ACU25590.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 418
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 116/260 (44%), Gaps = 1/260 (0%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
+ L++ +CKE A+ + + + + L S + FN+LM Y K G ++ + M
Sbjct: 139 FNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKMGILDEGFRLKNAMH 198
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
AS PD YTY+V + L + + A + +EM G V + TF+ L + + G
Sbjct: 199 ASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLV-PNGVTFTTLIDGHCKNGKL 257
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
+ A K++ ++ DL Y LI + + G+L + + + + I+Y +
Sbjct: 258 DLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTL 317
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
I DL A + K+ D V +I KEGR +AE++ G
Sbjct: 318 IDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRSVDAEKMLREMLSVGL 377
Query: 366 DPNAKTWEIFSDYYLRNGDM 385
P++ T+ I + + +NGD+
Sbjct: 378 KPDSGTYTIVMNEFCKNGDV 397
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 56/106 (52%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ +TY +L++ CKE E A +KM E N+ + + +L++ K G ++
Sbjct: 310 DKITYTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRSVDAEKML 369
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAA 227
+EM + + PDS TY + M D++ ++++EM+RDG V +
Sbjct: 370 REMLSVGLKPDSGTYTIVMNEFCKNGDVNTGSKLLKEMQRDGHVPS 415
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 1/166 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY L+N CKE ++A L ++M E L + + F +L+ + K G + I +++
Sbjct: 208 TYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQI 267
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ + PD TYN + D+ +I+EM G + D T++ L + G
Sbjct: 268 LSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKG-LKPDKITYTTLIDGSCKEGD 326
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
E A K++ N D Y LI+ + G + ++ R +
Sbjct: 327 LETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRSVDAEKMLREM 372
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 90/206 (43%), Gaps = 5/206 (2%)
Query: 194 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 253
Y +N+ M +I A+ V + + + G + +F+ L + Y++ G+ ++ R
Sbjct: 137 YFFNILMHRFCKEGEIRLAQLVFDAITKWG-LKPSVVSFNTLMNGYIKMGILDEGFRLKN 195
Query: 254 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVN 311
+ A D+ Y LI + + E + ++ + + PN +++ +I
Sbjct: 196 AMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPN--GVTFTTLIDGHCK 253
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
L A + +K+ S + D+ N +I + K+G L+ +L + +G P+ T
Sbjct: 254 NGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKIT 313
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAID 397
+ D + GD++ A + +K I+
Sbjct: 314 YTTLIDGSCKEGDLETAFEYRKKMIE 339
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/224 (19%), Positives = 97/224 (43%), Gaps = 11/224 (4%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
+L M G V ++ ++ + K +D A F ++ E N +T+ +L++
Sbjct: 190 GFRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLID 249
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+CK + A + +++ L + +N+L+ + K G ++ +I EM + P
Sbjct: 250 GHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKP 309
Query: 192 DSYTYNVWMRALAAVNDISGA----ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
D TY + D+ A +++IEE + D ++ L S + G
Sbjct: 310 DKITYTTLIDGSCKEGDLETAFEYRKKMIEE-----NIRLDDVVYTALISGLCKEGRSVD 364
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 291
AE+ L+E+ + D Y ++ + + G+++ ++ + ++
Sbjct: 365 AEKMLREMLSVGLKPDSGTYTIVMNEFCKNGDVNTGSKLLKEMQ 408
Score = 41.6 bits (96), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 56/125 (44%), Gaps = 13/125 (10%)
Query: 333 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 392
D+ +V+I KE +++ A EL + +G PN T+ D + +NG + LA++
Sbjct: 205 DVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGHCKNGKLDLAMEIY 264
Query: 393 EKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLI 452
++ + G P T T + F ++ D L+ + +D++ ++ +P
Sbjct: 265 KQILSQGLS------PDLITYNTLIYGFCKKGD-------LKQTRDLIDEMSMKGLKPDK 311
Query: 453 RTYAA 457
TY
Sbjct: 312 ITYTT 316
>gi|414881861|tpg|DAA58992.1| TPA: hypothetical protein ZEAMMB73_732512 [Zea mays]
Length = 642
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 3/245 (1%)
Query: 71 YYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGS 128
Y A+ L M+ RG+ + L + A + AE YF + + S N Y S
Sbjct: 201 YTKAMGLINEMKSRGLQMDIVIYGTLLAICASHNYCEEAEVYFQKMKDEGHSPNLFHYSS 260
Query: 129 LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS 188
LLN Y + KAE L++ ++ L + + +L+ +Y+K G EK ++ E++AS
Sbjct: 261 LLNAYSENSDYGKAELLMKDLRSSGLTPNKVMLTTLLKVYSKGGLFEKAKGLLTELEASG 320
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
D Y + + L I A + EMK G V +D FS + S G +++
Sbjct: 321 FAQDEMPYCILIDGLVKGGKIQEANILFNEMKEKG-VKSDGYAFSIMISALHRGGHHQES 379
Query: 249 ERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQV 308
++ KE E+ NA DL + Y T ++ V R+ + + + + NI++ +I+
Sbjct: 380 KQLAKEFESENASYDLVMLNTSLRTYCSTNDMESVMRMLKKMDESNISPDNITFNTLIRY 439
Query: 309 LVNLK 313
N K
Sbjct: 440 FCNAK 444
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 120/275 (43%), Gaps = 2/275 (0%)
Query: 120 SKNHLTYGSLL-NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
S + TY +LL C + KA L+ +MK L + + +L+ + A + E+
Sbjct: 181 SPDPFTYSTLLAGCMKLKQGYTKAMGLINEMKSRGLQMDIVIYGTLLAICASHNYCEEAE 240
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
Q+MK P+ + Y+ + A + +D AE ++++++ G + + + L +
Sbjct: 241 VYFQKMKDEGHSPNLFHYSSLLNAYSENSDYGKAELLMKDLRSSG-LTPNKVMLTTLLKV 299
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
Y + GLFEKA+ L ELE +D Y LI + G + E ++ ++ +
Sbjct: 300 YSKGGLFEKAKGLLTELEASGFAQDEMPYCILIDGLVKGGKIQEANILFNEMKEKGVKSD 359
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
++ MI L +++ KE+ES A+YD+ + N + Y +E+ + +
Sbjct: 360 GYAFSIMISALHRGGHHQESKQLAKEFESENASYDLVMLNTSLRTYCSTNDMESVMRMLK 419
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
+ P+ T+ Y+ LA +E
Sbjct: 420 KMDESNISPDNITFNTLIRYFCNAKVCHLAYKTVE 454
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 120/302 (39%), Gaps = 16/302 (5%)
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYA-----KTGHPEKIPAIIQ 182
S+L C K + + L ++M + G S PF + TL A K G+ + + +I
Sbjct: 154 SVLGCLVKNGRLDSSFKLYDEM--IREGLSPDPF-TYSTLLAGCMKLKQGYTKAM-GLIN 209
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
EMK+ + D Y + A+ N AE ++MK +G + + +S+L + Y E
Sbjct: 210 EMKSRGLQMDIVIYGTLLAICASHNYCEEAEVYFQKMKDEGH-SPNLFHYSSLLNAYSEN 268
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY 302
+ KAE +K+L + + L+ +Y + G + + L + + Y
Sbjct: 269 SDYGKAELLMKDLRSSGLTPNKVMLTTLLKVYSKGGLFEKAKGLLTELEASGFAQDEMPY 328
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+I LV + A F E + D ++MI A + G + +++L +
Sbjct: 329 CILIDGLVKGGKIQEANILFNEMKEKGVKSDGYAFSIMISALHRGGHHQESKQLAKEFES 388
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ 422
A + Y DM+ + L+K D P + T T +R+F
Sbjct: 389 ENASYDLVMLNTSLRTYCSTNDMESVMRMLKKM------DESNISPDNITFNTLIRYFCN 442
Query: 423 EK 424
K
Sbjct: 443 AK 444
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 130/307 (42%), Gaps = 41/307 (13%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI---P 178
N +++ ++N CK +A ++E MK + + + +N+L+ Y K G K+
Sbjct: 154 NVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKAD 213
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG--------------- 223
AI++EM A I P+ TYN+ + ++SGA RV EM+R G
Sbjct: 214 AILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGL 273
Query: 224 ---------------RVAADW----TTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 264
V++D T + L + + + +A ++E + +
Sbjct: 274 CSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNA 333
Query: 265 SAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 322
Y LI Y + G + + + ++ + R FP + +Y +I L D+ A
Sbjct: 334 MTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVS--TYNCLIAGLCRKGDVKAARSLM 391
Query: 323 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 382
E S + D+ N++I + K+G A +L + +G +P+ T+ D Y R
Sbjct: 392 NEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCRE 451
Query: 383 GDMKLAV 389
G+++ A+
Sbjct: 452 GNLRAAL 458
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 124/313 (39%), Gaps = 40/313 (12%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGID---AAENYFVDLPETSKNHLTYGSLL 130
A+++ M+++G+ V I ++ + +D A + V + N +T+ L+
Sbjct: 247 AMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVS-SDLEPNVVTHNVLI 305
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
N +CK +A L M++ + ++M + +L+ Y K G E A+ M I
Sbjct: 306 NGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIF 365
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
P+ TYN + L D+ A ++ EM +++AD T++ L + G KA +
Sbjct: 366 PEVSTYNCLIAGLCRKGDVKAARSLMNEMVSK-KLSADVVTYNILIDSLCKKGESRKAVK 424
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
L E+ + + Y L+ Y + GNL I R+
Sbjct: 425 LLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAAL-IVRT--------------------- 462
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
E ++ NV+I + +GRLE+A L RG PN
Sbjct: 463 -------------RMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRT 509
Query: 371 TWEIFSDYYLRNG 383
T+EI + + G
Sbjct: 510 TYEIIKEEMMEKG 522
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 114/281 (40%), Gaps = 10/281 (3%)
Query: 156 FSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERV 215
S + N L++ K + + +EM I + ++N+ + L V ++ A V
Sbjct: 118 LSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDV 177
Query: 216 IEEMKRDGRVAADWTTFSNLASIYVEAGLFE---KAERALKELENRNAHRDLSAYQFLIT 272
IE+MK G V+ + T++ L Y + G KA+ LKE+ + + Y LI
Sbjct: 178 IEDMKVWG-VSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILID 236
Query: 273 LYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY 332
+ + N+S R++ ++ ++Y +I L + + A + S
Sbjct: 237 GFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEP 296
Query: 333 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 392
++ NV+I + K + A L ++G DPNA T+ D Y ++G M+ A
Sbjct: 297 NVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALY 356
Query: 393 EKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 433
ID G P T + ++ DV A +
Sbjct: 357 NMMIDRG------IFPEVSTYNCLIAGLCRKGDVKAARSLM 391
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/353 (19%), Positives = 139/353 (39%), Gaps = 10/353 (2%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
++ LL+ KE E + +M + + + + FN ++ K G + +I++
Sbjct: 121 ISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIED 180
Query: 184 MKASSIMPDSYTYNVWMRA---LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
MK + P+ TYN + + + + A+ +++EM G + + T++ L +
Sbjct: 181 MKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKG-ICPNEVTYNILIDGFC 239
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
+ A R E++ + ++ Y LI G + E + + + +
Sbjct: 240 KDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVV 299
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
++ +I K + A F + E + +I AY K+GR+E+A L
Sbjct: 300 THNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMM 359
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 420
RG P T+ R GD+K A + + + + V + I + +
Sbjct: 360 IDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVS--KKLSADVVTYNILIDSLCKKG 417
Query: 421 EQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEK 473
E K V + E+ +K ++ V + L+ Y G ++ R +ME+
Sbjct: 418 ESRKAVKLLD---EMFEKGLNPSHV-TYNTLMDGYCREGNLRAALIVRTRMER 466
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 77/178 (43%), Gaps = 3/178 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL--PETSKNHLTYGSLLN 131
A L M RG+ VS + + + + AA + ++ + S + +TY L++
Sbjct: 352 AFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILID 411
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK+ + KA LL++M E L S + +N+LM Y + G+ + M+
Sbjct: 412 SLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQA 471
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
+ T+NV ++ + A ++ EM G V + TT+ + +E G E
Sbjct: 472 NVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLV-PNRTTYEIIKEEMMEKGFVPDIE 528
>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
Length = 614
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 115/262 (43%), Gaps = 1/262 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TYG+ + CK + A + E+M+E + +++ F +L+ + K G+ + +EM
Sbjct: 316 TYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREM 375
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
I D YN L V D+ A ++EEM+ +G + D T++ L + + G
Sbjct: 376 ATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNG-LKPDKVTYTTLIDGFCKEGE 434
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+ A +E+ + D Y LI+ ++G + RI + A N +Y
Sbjct: 435 LDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTM 494
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+I D+ K KE ++ + NV++ + G+++NA+ L G
Sbjct: 495 VIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIG 554
Query: 365 ADPNAKTWEIFSDYYLRNGDMK 386
P+ T+ I D + ++G ++
Sbjct: 555 VCPDDITYNILLDGHCKHGKVR 576
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 95/243 (39%), Gaps = 1/243 (0%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
FN+LM+ K A+ M + + PD YTY +M+ L I A + EEM+
Sbjct: 282 FNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMR 341
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
G V + F+ L + + G +E+ R DL AY L + +L
Sbjct: 342 ERG-VNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDL 400
Query: 281 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 340
I +R ++Y +I +L A + +E D +
Sbjct: 401 KAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTL 460
Query: 341 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 400
I +K GR ++E + G +P+ T+ + D + +N D+K L++ + GR
Sbjct: 461 ISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGR 520
Query: 401 GDG 403
G
Sbjct: 521 KPG 523
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 99/215 (46%), Gaps = 11/215 (5%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNH------LTYG 127
L+L M RG+ + + + +V+ + AA D+ E +N+ +TY
Sbjct: 368 GLELHREMATRGIKTDLVAYNALANGLCRVRDLKAAN----DIVEEMRNNGLKPDKVTYT 423
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 187
+L++ +CKE + A + ++M + + + + +L++ +K+G I+ EM +
Sbjct: 424 TLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEA 483
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
+ PD+ TY + + A +D+ ++++EM+ GR T++ + + + G +
Sbjct: 484 GLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPG-VVTYNVVMNGFCILGQMKN 542
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 282
A+ L + N D Y L+ + + G + +
Sbjct: 543 ADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVRD 577
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 135/306 (44%), Gaps = 5/306 (1%)
Query: 97 LDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNL 154
+D + K Q +D AE F + + +++TY ++++ CK ++AE + ++M + +
Sbjct: 267 IDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGV 326
Query: 155 GFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAER 214
+ +N+++ K +K + Q+M + PD+ TY + + L + AE
Sbjct: 327 KPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEG 386
Query: 215 VIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLY 274
V ++M G V + T++ L Y+ G +E+ + +KE+ + D+ Y L+
Sbjct: 387 VFQQMIDKG-VKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYL 445
Query: 275 GQTGNLSEVYRIWRSL-RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYD 333
+ G +E ++ S+ R + I Y M+ L + + +
Sbjct: 446 CKNGKCNEARSLFDSMIRKGIKPSVTI-YGIMLHGYGKKGALSEMHDLLNLMVANGISPN 504
Query: 334 IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
R+ N +I AYAK ++ + + +++G PN T+ D + G + AV
Sbjct: 505 HRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFN 564
Query: 394 KAIDTG 399
+ I+ G
Sbjct: 565 QMINEG 570
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 121/290 (41%), Gaps = 3/290 (1%)
Query: 85 GMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKA 142
G++ V +D + K Q +D AE+ F + E N++TY ++++ CK + A
Sbjct: 220 GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMA 279
Query: 143 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 202
E + +KM + + S++ +N+++ K ++ + Q+M + PD TYN +
Sbjct: 280 EGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDG 339
Query: 203 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 262
L I AE V ++M G V D T++ + +A ++AE +++ ++
Sbjct: 340 LCKAQAIDKAEGVFQQMIDKG-VKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKP 398
Query: 263 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 322
+ Y LI Y TG EV + + + +Y ++ L A F
Sbjct: 399 NNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLF 458
Query: 323 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
+ + +M+ Y K+G L +L G PN + +
Sbjct: 459 DSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIF 508
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 89/440 (20%), Positives = 173/440 (39%), Gaps = 63/440 (14%)
Query: 62 LKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQG------IDAAENYFVD 115
LK L DR+ A +L +M G + + S + ++V + G +D A + F++
Sbjct: 162 LKGLCDRRRAEEARELL-HMMVDGQDSSCSPDVVSYNIV--INGFFNEGQVDKAYSLFLE 218
Query: 116 LPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
+ S + +TY ++++ CK ++AE + ++M E + +++ +N+++ K +
Sbjct: 219 MG-VSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVD 277
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
+ Q+M + P + TYN + L + AE V ++M G V D T++ +
Sbjct: 278 MAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRG-VKPDHVTYNTI 336
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
+A +KAE +++ ++ D
Sbjct: 337 IDGLCKAQAIDKAEGVFQQMIDKGVKPD-------------------------------- 364
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEE 355
N++Y +I L + + AE F++ + N +I Y G+ E +
Sbjct: 365 ---NLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQ 421
Query: 356 LKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRT 415
+ +P+ T+ + DY +NG A + I G + S TI
Sbjct: 422 RIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKG-------IKPSVTIYG 474
Query: 416 FMRHFEQEKDVDGAEGFLEILKKAVDDLGVE----VFEPLIRTYAAAGRTSPVMLRRLKM 471
M H +K GA + L + G+ +F +I YA VM +KM
Sbjct: 475 IMLHGYGKK---GALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKM 531
Query: 472 EKVEVSE---ASKKLLEAIC 488
++ +S L++A+C
Sbjct: 532 KQQGLSPNVVTYGTLIDALC 551
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/375 (21%), Positives = 154/375 (41%), Gaps = 48/375 (12%)
Query: 101 AKVQGIDAAENYFVDLPET--SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFS- 157
AK ID + F+ + + S N +TYG+L++ CK + +A+L+ + +N G +
Sbjct: 516 AKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCK--LGRVDDAVLQFNQMINEGVTP 573
Query: 158 -SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
++ FNSL+ EK+ + EM I PD +N + L + A R+I
Sbjct: 574 NNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLI 633
Query: 217 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 276
+ M G + D +++ L + A ++A + L + + ++ +Y L+ Y +
Sbjct: 634 DSMVCMG-LKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCK 692
Query: 277 TGNLSEVYRIWRSL--------------------RLAFPNTANISYLNMIQ--------- 307
G + Y ++R + R + A Y+NMI+
Sbjct: 693 AGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICT 752
Query: 308 ---VLVNLKDLPGAEKCFKEWESGCAT---YDIRVTNVMIGAYAKEGRLENAEELKERAR 361
+L ++ FK ++S C+ DI N+MI K GR E+A +L
Sbjct: 753 YSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIP 812
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
G P+ T+ + ++ + G ++ +DCL ++ P+S + +R
Sbjct: 813 ANGLVPSVVTYRLIAENLIEEGSLE-ELDCLFSVMEK-----SGTAPNSHMLNALIRKLL 866
Query: 422 QEKDVDGAEGFLEIL 436
++ A +L L
Sbjct: 867 DRGEIPRAGAYLSKL 881
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/312 (18%), Positives = 113/312 (36%), Gaps = 38/312 (12%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLN 131
A L ++M ++G+ +V+ I L K + + + S NH + +++
Sbjct: 454 ARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVIC 513
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
Y K M ++ + KMK+ L + + + +L+ K G + +M + P
Sbjct: 514 AYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTP 573
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
++ +N + L V+ E + EM G + D F+ + + G +A R
Sbjct: 574 NNVVFNSLVYGLCTVDKWEKVEELFLEMLNQG-IRPDIVFFNTVLCNLCKEGRVMEARRL 632
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
+ + D+ +Y LI + + E ++ + A +SY
Sbjct: 633 IDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSY--------- 683
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
N ++ Y K GR++NA L R+G P +T
Sbjct: 684 --------------------------NTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVET 717
Query: 372 WEIFSDYYLRNG 383
+ + R+G
Sbjct: 718 YNTILNGLFRSG 729
>gi|302789998|ref|XP_002976767.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
gi|300155805|gb|EFJ22436.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
Length = 669
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/359 (21%), Positives = 161/359 (44%), Gaps = 10/359 (2%)
Query: 45 QFLKSKKRVF---KWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVA 101
++LK++ ++ ++ LK LR+ + + KL E M RG+ + ++
Sbjct: 130 EWLKARPELYEINRYTYNVMLKILRNGRQLELSEKLVEEMTGRGIQPDNYTFSTLINCAK 189
Query: 102 KVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSM 159
+ + + A +F + + +TY S+++ Y + +A L EK+K +N ++
Sbjct: 190 RCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLKSVNWKLDTV 249
Query: 160 PFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM 219
+ ++ +YA+ G + I ++QEM+ S P++ N M L+ ++ A++V EM
Sbjct: 250 TYGAIANVYARAGDYQSIMQLVQEMRDSGSSPNAVIMNTLMGTLSKAGKVNQAKKVFNEM 309
Query: 220 KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGN 279
+ G V+ T S L +Y G +++A + L+ D++ Y L+ + G
Sbjct: 310 RTSG-VSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKCDVAVYNSLMKACVEGGR 368
Query: 280 LSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
+ + I + ++ A N +++Y + + A + F + + D + V
Sbjct: 369 VEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPARRMFDKVVALNGKPDTPLFTV 428
Query: 340 MIGAYAKEGRLENAEELKERARRRG-ADPNAKTWEIFSDY--YLRNGDMKLAV-DCLEK 394
MI A G +E A ++ + G P+ + + ++ D +LA+ DCL+K
Sbjct: 429 MIRACKLAGEIEQASKIFDEMMESGCCSPDERVSGMLLSCMAMAKSDDERLAILDCLDK 487
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/279 (18%), Positives = 127/279 (45%), Gaps = 9/279 (3%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N TY +L E +E L+E+M + + F++L+ + PE+
Sbjct: 142 NRYTYNVMLKILRNGRQLELSEKLVEEMTGRGIQPDNYTFSTLINCAKRCRQPEEALKWF 201
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADW----TTFSNLAS 237
+ MK+ I+PD TYN + V ++ A + E++K + +W T+ +A+
Sbjct: 202 ERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLK-----SVNWKLDTVTYGAIAN 256
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
+Y AG ++ + ++E+ + + + L+ + G +++ +++ +R + +
Sbjct: 257 VYARAGDYQSIMQLVQEMRDSGSSPNAVIMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSP 316
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
++ ++++ + A + ++ ++ D+ V N ++ A + GR+E AE++
Sbjct: 317 TPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKCDVAVYNSLMKACVEGGRVEQAEDIL 376
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 396
+ +R G +P+ T+ + Y G + A +K +
Sbjct: 377 KEMKRAGCNPDHLTYRTAMNTYATKGMVDPARRMFDKVV 415
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 127/308 (41%), Gaps = 9/308 (2%)
Query: 158 SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM--PDSYTYNVWMRALAAVNDISGAERV 215
S+ +++T+ EK A + +KA + + YTYNV ++ L + +E++
Sbjct: 106 SLSAKNIVTVLNNINRWEKALAFFEWLKARPELYEINRYTYNVMLKILRNGRQLELSEKL 165
Query: 216 IEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYG 275
+EEM G + D TFS L + E+A + + +++ D Y +I +YG
Sbjct: 166 VEEMTGRG-IQPDNYTFSTLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYG 224
Query: 276 QTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 335
+ G ++E ++ L+ ++Y + V D + +E ++ +
Sbjct: 225 RVGRVNEAVELYEKLKSVNWKLDTVTYGAIANVYARAGDYQSIMQLVQEMRDSGSSPNAV 284
Query: 336 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 395
+ N ++G +K G++ A+++ R G P T I + Y R G A + E
Sbjct: 285 IMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETL 344
Query: 396 IDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 455
G W + M+ + V+ AE L+ +K+A + + + TY
Sbjct: 345 KTEG------WKCDVAVYNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTY 398
Query: 456 AAAGRTSP 463
A G P
Sbjct: 399 ATKGMVDP 406
>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
Length = 551
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 111/256 (43%), Gaps = 5/256 (1%)
Query: 141 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 200
K EA+ E+MK NL ++S++ Y + G+ + + E + I P+ +TY +
Sbjct: 231 KVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALI 290
Query: 201 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 260
+ + AE ++ +M+ G V + F+ + Y + +KA +E
Sbjct: 291 NGFCKIGQMEAAEMLVTDMQVRG-VGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGI 349
Query: 261 HRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGA 318
D+ Y L + + E + R + + PN ++SY +I + N D+ A
Sbjct: 350 ELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPN--HVSYTTLISIHCNEGDMVEA 407
Query: 319 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 378
+ F+E A + NVM+ Y K+G + AE K+ ++G P+ ++
Sbjct: 408 RRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAALVHG 467
Query: 379 YLRNGDMKLAVDCLEK 394
+ NG + +A+ E+
Sbjct: 468 HCVNGKVDVALRLFEE 483
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 111/249 (44%), Gaps = 5/249 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N TYG+L+N +CK E AE L+ M+ +G + + FN+++ Y + +K I
Sbjct: 282 NEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIK 341
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M+ I D YTYN L N + A+ ++ M G V + +++ L SI+
Sbjct: 342 MIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKG-VRPNHVSYTTLISIHCN 400
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTAN 299
G +A R +E+ A L Y ++ Y + G++ E R + + + P+
Sbjct: 401 EGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGLVPDI-- 458
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
SY ++ + A + F+E + + ++ +I AKEGR E A +L +
Sbjct: 459 YSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDN 518
Query: 360 ARRRGADPN 368
G P+
Sbjct: 519 MLGDGLTPD 527
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/364 (21%), Positives = 144/364 (39%), Gaps = 20/364 (5%)
Query: 94 AIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELN 153
A HLD A D + P+ S L+ +++ YCK A LL++M
Sbjct: 120 AGHLDTAA-----DLLKQAATSCPD-SVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHG 173
Query: 154 LGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAE 213
+ +++ +NSL+ Y + +++ +++ M+ I P TY + + L+A DI+ E
Sbjct: 174 VKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVE 233
Query: 214 RVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITL 273
V EEMK ++ D +S++ + Y AG +A E + Y LI
Sbjct: 234 AVFEEMKSK-NLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALING 292
Query: 274 YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYD 333
+ + G + + +++ I + MI + A + E D
Sbjct: 293 FCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELD 352
Query: 334 IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
+ N + + R++ A+ L +G PN ++ + GDM A
Sbjct: 353 VYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEA----R 408
Query: 394 KAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIR 453
+ G+G + PS T M + ++ + AE F KK ++ G P I
Sbjct: 409 RLFREMAGNGAE--PSLVTYNVMMDGYIKKGSIREAERF----KKEMEKKG---LVPDIY 459
Query: 454 TYAA 457
+YAA
Sbjct: 460 SYAA 463
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 78/177 (44%), Gaps = 3/177 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL++ MEK G+ V + + +D A+N + E NH++Y +L++
Sbjct: 337 ALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLIS 396
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C E +A L +M S + +N +M Y K G + +EM+ ++P
Sbjct: 397 IHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGLVP 456
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
D Y+Y + + A R+ EEMK+ G + ++ L S + G E+A
Sbjct: 457 DIYSYAALVHGHCVNGKVDVALRLFEEMKQRGS-KPNLVAYTALISGLAKEGRSEEA 512
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 104/250 (41%), Gaps = 1/250 (0%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y L+N CKE ++A+ LL M + + + +++LM Y G + I M
Sbjct: 223 YNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMV 282
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
+ P+ Y+YN+ + L + A ++ EM V D T+++L ++G
Sbjct: 283 QMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVP-DTVTYNSLIDGLCKSGRI 341
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
A + E+ +R D+ Y L+ + NL + ++ ++ +Y +
Sbjct: 342 TSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTAL 401
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
I L L A++ F+ D+ VMI KEG + A +K + G
Sbjct: 402 IDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGC 461
Query: 366 DPNAKTWEIF 375
PNA T+EI
Sbjct: 462 IPNAVTFEII 471
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 76/383 (19%), Positives = 163/383 (42%), Gaps = 10/383 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
A+KL +E R V +D + K + ++ A + + +D + +TY +L+
Sbjct: 134 AVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIY 193
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C A +LL++M N+ +N L+ K G+ ++ ++ M I P
Sbjct: 194 GFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKP 253
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
TY+ M V ++ A+++ M + G V + +++ + + + ++A
Sbjct: 254 GVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMG-VNPNVYSYNIMINGLCKCKRVDEAMNL 312
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
L+E+ ++N D Y LI ++G ++ + + ++Y +++ L
Sbjct: 313 LREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCK 372
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
++L A F + + + +I K GRL+NA+EL + +G + T
Sbjct: 373 NQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWT 432
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG 431
+ + + G A+ AI + D G +P++ T +R ++ + D AE
Sbjct: 433 YTVMISGLCKEGMFDEAL-----AIKSKMEDNG-CIPNAVTFEIIIRSLFEKDENDKAEK 486
Query: 432 FL-EILKKAVDDLGVEVFEPLIR 453
L E++ K + L +V + ++
Sbjct: 487 LLHEMIAKGLLVLDFKVADVFVQ 509
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 106/264 (40%), Gaps = 1/264 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+H++YG+LLN CK T A LL +++ + + + +N+++ K + +
Sbjct: 114 DHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLY 173
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EM A I PD+ TY + + + GA +++EM + ++ L + +
Sbjct: 174 SEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILK-NINPGVYIYNILINALCK 232
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G ++A+ L + + Y L+ Y G + +I+ ++ N S
Sbjct: 233 EGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYS 292
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y MI L K + A +E D N +I K GR+ +A L
Sbjct: 293 YNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMH 352
Query: 362 RRGADPNAKTWEIFSDYYLRNGDM 385
RG + T+ D +N ++
Sbjct: 353 HRGQPADVVTYTSLLDALCKNQNL 376
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 131/348 (37%), Gaps = 50/348 (14%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +T L+NC+C +LG + F S++ K G+
Sbjct: 44 NFVTLNILINCFC------------------HLGQMAFSF-SVLGKILKLGYQ------- 77
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
PD+ T N M+ L ++ + +++ G D ++ L + +
Sbjct: 78 ---------PDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQG-FQMDHVSYGTLLNGLCK 127
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTAN 299
G A + L+ +E+R+ ++ Y +I + ++E Y ++ + R FP+
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDA-- 185
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
I+Y +I L L GA E + + N++I A KEG ++ A+ L
Sbjct: 186 ITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAV 245
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
+ G P T+ D Y G+++ A + G P+ + +
Sbjct: 246 MTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVN------PNVYSYNIMING 299
Query: 420 FEQEKDVDGAEGFL-EIL-KKAVDDLGVEVFEPLIRTYAAAGRTSPVM 465
+ K VD A L E+L K V D + LI +GR + +
Sbjct: 300 LCKCKRVDEAMNLLREMLHKNMVPD--TVTYNSLIDGLCKSGRITSAL 345
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 155/346 (44%), Gaps = 24/346 (6%)
Query: 64 KLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--K 121
KLRD KL E M G++ + I +D AK +D A + ++
Sbjct: 23 KLRD------GYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEP 76
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGH-PEKIPAI 180
+ TY SLLN +CKE ++A L + M E + ++++++ KTG E + +
Sbjct: 77 SIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEML 136
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
+M ++ YN + L +I A +++EEM G V D T++ + S
Sbjct: 137 FHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVP-DNITYNTILSGLC 195
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTA 298
G +A++ + +R D+ AY L+ + G E ++++ + + P+T
Sbjct: 196 RMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDT- 254
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCA----TYDIRVTNVMIGAYAKEGRLENA 353
++Y +++ L ++ AE+ FK+ SGCA TY I ++ + + ++++A
Sbjct: 255 -VTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSI-----VLSGHCRAKKVDDA 308
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
++ E + GA P+ T+ I D + + A + +D G
Sbjct: 309 HKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNG 354
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 136/329 (41%), Gaps = 10/329 (3%)
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
E S N T+ +L +CK+ L E+M + + + +N L+ YAK G ++
Sbjct: 3 ECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEA 62
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
+ +EM + + P YTYN + A + A + + M G D T+S + S
Sbjct: 63 NRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKG-FEPDVVTYSTIIS 121
Query: 238 IYVEAG-LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPN 296
+ G + E E ++ R + AY LI + N+ Y++ +
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
NI+Y ++ L + + A++ F S + D+ N ++ A KEG+ + A +L
Sbjct: 182 PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKL 241
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTF 416
+ +G P+ T+ R +M A + +K + +G P+ T
Sbjct: 242 FKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASG------CAPNGATYSIV 295
Query: 417 MRHFEQEKDVDGAEGFLEILKK--AVDDL 443
+ + K VD A LE + K AV D+
Sbjct: 296 LSGHCRAKKVDDAHKVLEEMSKIGAVPDV 324
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 138/333 (41%), Gaps = 39/333 (11%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGI-DAAENYFVDLPE--TSKNHLTYGSLL 130
A++L + M ++G V + + + K + +A E F + E S N + Y +L+
Sbjct: 97 AMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALI 156
Query: 131 NCYCKELMTEKAEALLEKM-------------------------KELNLGFSSMP----- 160
N CK+ E+A LLE+M E F SMP
Sbjct: 157 NGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYS 216
Query: 161 -----FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERV 215
+N L+ K G ++ + +++ A MPD+ TYN + LA +++ AE +
Sbjct: 217 PDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEM 276
Query: 216 IEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYG 275
++M G A + T+S + S + A + A + L+E+ A D+ Y L+
Sbjct: 277 FKKMVASG-CAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLC 335
Query: 276 QTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 335
+T + + + ++ ++ +SY ++ L + A F D+
Sbjct: 336 KTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVV 395
Query: 336 VTNVMIGAYAKEGRLENAEELKERARRRGADPN 368
N+++ K G+L+ A++L ++ G P+
Sbjct: 396 TFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPD 428
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 104/221 (47%), Gaps = 5/221 (2%)
Query: 74 ALKLSENMEKRG-MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLL 130
A+KL +++ +G M TV+ +I L L A+ +D AE F + + + N TY +L
Sbjct: 238 AMKLFKDVIAKGYMPDTVTYNSILLGL-ARKSNMDEAEEMFKKMVASGCAPNGATYSIVL 296
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
+ +C+ + A +LE+M ++ + +N L+ KT +K + M +
Sbjct: 297 SGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCA 356
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
PD +Y+V + L N + A RV+ + + ++ D TF+ L +AG ++A+
Sbjct: 357 PDIVSYSVVLNGLCKTNKVHDA-RVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKD 415
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 291
L ++ D AY L+ + G + R+ ++++
Sbjct: 416 LLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMK 456
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 64/152 (42%), Gaps = 2/152 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A K+ E M K G V I LD + K +D A F + + + + ++Y +LN
Sbjct: 308 AHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLN 367
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK A L ++M E L + FN LM K G ++ ++ +M S P
Sbjct: 368 GLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAP 427
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
D YN M L A+R+ + MK G
Sbjct: 428 DYVAYNTLMNGLRKQGRHIQADRLTQAMKEKG 459
>gi|410110113|gb|AFV61136.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
filifolia]
Length = 439
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 122/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 12 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAIS 71
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S PD YN + A +I EMK G V + T++S L ++Y
Sbjct: 72 IFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAG-VMPNTTSYSTLLTMY 130
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ +R
Sbjct: 131 VENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 190
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 191 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 250
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 251 MQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 290
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 111/221 (50%), Gaps = 20/221 (9%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 223 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAML 282
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S + D + + A ++ A+R++ E+KR + D T LA
Sbjct: 283 FQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD-TAIHILAG--- 338
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + +D++ ++ +I L Y + N+ EV+ R L FP++
Sbjct: 339 -AGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKXSNVVEVFDKMRGLGY-FPDS 396
Query: 298 ANISYLNMIQVLVN----LKDLPGAEKCFKEW-ESGCATYD 333
++I +++N L++ A + E E GC D
Sbjct: 397 ------DVIAIVLNAYGKLQEFDKANDVYMEMQEVGCVFSD 431
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 90/211 (42%), Gaps = 8/211 (3%)
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+ EM+ ++ PD YTY+ + A +++M++D +V D +SNL +
Sbjct: 1 GLFDEMRRRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-QVPGDLVLYSNLIEL 59
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPN 296
+ + KA L+ DL AY +I ++G+ E + ++ A PN
Sbjct: 60 SRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPN 119
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
T SY ++ + V K A F E D+ N+MI Y + G + A++L
Sbjct: 120 TT--SYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 177
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDMKL 387
R+ G +PN ++ Y GD +L
Sbjct: 178 FWGMRKMGIEPNVVSYNTLLRVY---GDAEL 205
>gi|255661180|gb|ACU25759.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 426
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 122/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 6 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 65
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S MPD YN + A +I EM+ G V + ++S L ++Y
Sbjct: 66 IFSRLKKSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAG-VMPNTASYSTLLTMY 124
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ +R
Sbjct: 125 VENKKFLEALSVFAEMREIKCFLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 245 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 284
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 109/221 (49%), Gaps = 20/221 (9%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML 276
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S + D Y + A ++ A+R++ E+KR + D I
Sbjct: 277 FQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAI-----HILA 331
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + +D++ ++ +I L Y + GN+ EV+ R L FP++
Sbjct: 332 GAGRIEEATWVFRQAIDAGEVKDITVFERMIYLFSKYKKYGNVVEVFDKMRGLGY-FPDS 390
Query: 298 ANISYLNMIQVLVN----LKDLPGAEKCFKEW-ESGCATYD 333
N+I +++N L + A + E E GC D
Sbjct: 391 ------NVIALVLNAYGKLHEFDKANDVYMEMQEVGCVFSD 425
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 8/202 (3%)
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
++ PD YTY+ + A +++M++D RV D +SNL + + + K
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNM 305
A L+ DL AY +I ++G+ E + +R A PNTA SY +
Sbjct: 63 AISIFSRLKKSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTA--SYSTL 120
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
+ + V K A F E D+ N+MI Y + G + A++L R+ G
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCFLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180
Query: 366 DPNAKTWEIFSDYYLRNGDMKL 387
+PN ++ Y GD +L
Sbjct: 181 EPNVVSYNTLLRVY---GDAEL 199
>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 772
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 158/401 (39%), Gaps = 15/401 (3%)
Query: 62 LKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--T 119
L+ LRD L A + ME+ G+ TV LD K +D A ++ E
Sbjct: 187 LRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGC 246
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
N +TY L+N K+ E+A+ L+E+M L S+ +N L+ + + G +
Sbjct: 247 YPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFD 306
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+++EM P TYN M L ++G +M + + D +F++L Y
Sbjct: 307 LVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLK-SKFTPDIVSFNSLLYGY 365
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNT 297
G +A EL+ R+ + Y LI G L R+ + + + FP+
Sbjct: 366 CRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDI 425
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
+Y ++ L + A F E S D N I K A ++
Sbjct: 426 --FTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQ 483
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 417
E G P+ T+ +F + G+ + A D LE + G +P T + +
Sbjct: 484 EEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDG------LIPDHVTYTSII 537
Query: 418 RHFEQEKDVDGA-EGFLEILKKAVDDLGVEVFEPLIRTYAA 457
F + + A E F E+L K V V + LI +AA
Sbjct: 538 NGFVKNGHLRKAREVFNEMLSKGVAP-SVVTYTVLIHAHAA 577
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 72/167 (43%), Gaps = 1/167 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY ++ C++ E+A LLE M L + + S++ + K GH K + E
Sbjct: 496 ITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNE 555
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + + P TY V + A AA + A +M + V A+ T++ + +
Sbjct: 556 MLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKM-LEKSVPANVITYNAIINGLCMTR 614
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
++A + E+E + + +Y LI G E R++R +
Sbjct: 615 RMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREM 661
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 72/150 (48%), Gaps = 5/150 (3%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELM 138
M +G+ +V + + A Q +D A YF + E S N +TY +++N C
Sbjct: 556 MLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRR 615
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
++A ++M+E + + + L+ G+ E+ + +EM I PDS+T++V
Sbjct: 616 MDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSV 675
Query: 199 WMRALA---AVNDISGAERVIEEMKRDGRV 225
+++ L V+ + E +I+ ++ + V
Sbjct: 676 FLKNLHRDYQVHAVQCVESLIQNVEDNINV 705
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 154/397 (38%), Gaps = 39/397 (9%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S N L Y L +CKE + + E +K S +++LM + I
Sbjct: 194 SYNGLIYFLLQPGFCKEALKVYKRMISEGLKP-----SMKTYSALMVALGRRRDTGTIMD 248
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+++EM+ + P+ YTY + +R L I A +++ M+ +G D T++ L
Sbjct: 249 LLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEG-CGPDVVTYTVLIDAL 307
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
AG +KA+ ++ + DL Y L++ +G G+L V R W +
Sbjct: 308 CAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDV 367
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
++Y +++ L + A ++ N +I RL+ A EL
Sbjct: 368 VTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNN 427
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA-------------------IDTGR 400
G P A ++ +F DYY + GD + A+D EK + GR
Sbjct: 428 MESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGR 487
Query: 401 GDGGKWV----------PSSETIRTFMRHFEQEKDVDGAEGFL-EILKKAVDDLGVEVFE 449
K + P S T M+ + + +D A L E+L + + + V
Sbjct: 488 IREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEP-DIIVVN 546
Query: 450 PLIRTYAAAGRTSPV--MLRRLKMEKVEVSEASKKLL 484
LI T AGR M RLK K+ + + +L
Sbjct: 547 SLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNIL 583
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 120/298 (40%), Gaps = 49/298 (16%)
Query: 92 DQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKE 151
DQA + V +V+GI N TY +L++ ++A L M+
Sbjct: 384 DQAFDMLDVMRVRGI-------------VPNLHTYNTLISGLLNLRRLDEALELFNNMES 430
Query: 152 LNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISG 211
L + ++ + + Y K G PEK ++MK IMP N + +LA + I
Sbjct: 431 LGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIRE 490
Query: 212 AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 271
A+ + ++ G ++ D T++ + Y +AG +KA + L E+ + D+ LI
Sbjct: 491 AKDIFNDIHNCG-LSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLI 549
Query: 272 TLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCAT 331
+ G + E ++++ L+ +LK P T
Sbjct: 550 DTLYKAGRVDEAWQMFGRLK-------------------DLKLAPTV-----------VT 579
Query: 332 YDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 389
Y+I +T + KEG+L A +L + G PN T+ D +N + LA+
Sbjct: 580 YNILITGL-----GKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLAL 632
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/300 (20%), Positives = 115/300 (38%), Gaps = 38/300 (12%)
Query: 75 LKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL--PETSKNHLTYGSLLNC 132
+L M RG + I + + K I+ A + + ++ + S TYG L+
Sbjct: 843 FELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGG 902
Query: 133 YCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPD 192
K +E+A + E+M + + +N L+ + K G+ + + M I PD
Sbjct: 903 LLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPD 962
Query: 193 SYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERAL 252
+Y + + L + A EE+K G + D +++ + + ++ E+A
Sbjct: 963 LKSYTILVECLFMTGRVDDAVHYFEELKLTG-LDPDTVSYNLMINGLGKSRRLEEALSLF 1021
Query: 253 KELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNL 312
E++NR +L Y LI +G G + + +++ L+
Sbjct: 1022 SEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQ--------------------- 1060
Query: 313 KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
F E TY N +I ++K G + A + ++ G PNA T+
Sbjct: 1061 ---------FMGLEPNVFTY-----NALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTF 1106
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 90/210 (42%), Gaps = 1/210 (0%)
Query: 140 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 199
EKA EKMK+ + S N+ + A+ G + I ++ + PDS TYN+
Sbjct: 454 EKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMM 513
Query: 200 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 259
M+ + I A +++ EM +G D ++L +AG ++A + L++
Sbjct: 514 MKCYSKAGQIDKATKLLTEMLSEG-CEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLK 572
Query: 260 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 319
+ Y LIT G+ G L + ++ S++ + +++ ++ L + A
Sbjct: 573 LAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLAL 632
Query: 320 KCFKEWESGCATYDIRVTNVMIGAYAKEGR 349
K F + D+ N +I KEGR
Sbjct: 633 KMFCRMTIMNCSPDVLTYNTIIYGLIKEGR 662
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 126/318 (39%), Gaps = 42/318 (13%)
Query: 117 PETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK 176
PE S N L G LL C +TE A L +MK + +N L+ + K+ ++
Sbjct: 788 PE-SYNCLMDG-LLGCN----ITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDE 841
Query: 177 IPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLA 236
+ + EM P+ T+N+ + AL N I+ A + E+ G + T+ L
Sbjct: 842 LFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEII-SGDFSPTPCTYGPLI 900
Query: 237 SIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS--------------- 281
++AG E+A + +E+ + + + Y LI +G+ GN++
Sbjct: 901 GGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIR 960
Query: 282 --------------------EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 321
+ + L+L + +SY MI L + L A
Sbjct: 961 PDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSL 1020
Query: 322 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 381
F E ++ + ++ N +I + G ++ A ++ E + G +PN T+ + +
Sbjct: 1021 FSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSK 1080
Query: 382 NGDMKLAVDCLEKAIDTG 399
+G+ A +K + G
Sbjct: 1081 SGNKDRAFSVFKKMMIVG 1098
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 87/216 (40%), Gaps = 5/216 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLN 131
AL E M+KRG+ +++ L +A++ I A++ F D+ S + +TY ++
Sbjct: 456 ALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMK 515
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CY K +KA LL +M + NSL+ K G ++ + +K + P
Sbjct: 516 CYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAP 575
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
TYN+ + L + A + MK G + TF+ L + + A +
Sbjct: 576 TVVTYNILITGLGKEGKLLKALDLFGSMKESG-CPPNTVTFNALLDCLCKNDAVDLALKM 634
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW 287
+ N D+ Y +I YG Y W
Sbjct: 635 FCRMTIMNCSPDVLTYNTII--YGLIKEGRAGYAFW 668
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 53/270 (19%), Positives = 103/270 (38%), Gaps = 2/270 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +T+ +LL+C CK + A + +M +N + +N+++ K G
Sbjct: 611 NTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFY 670
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE-MKRDGRVAADWTTFSNLASIYV 240
+MK + PD T + + + A +++ E + + G ++ + I +
Sbjct: 671 HQMK-KFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILI 729
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
EA + E A + N D + L Q L + + +
Sbjct: 730 EAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPE 789
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
SY ++ L+ A K F E ++ +I N+++ A+ K R++ EL
Sbjct: 790 SYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEM 849
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
RG PN T I +++ + A+D
Sbjct: 850 LCRGCKPNIITHNIIISALVKSNSINKALD 879
>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Brachypodium distachyon]
Length = 877
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 150/377 (39%), Gaps = 46/377 (12%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N + Y L++ YC+ + LL +M+ L + + + +LM+ + G EKI +++
Sbjct: 293 NAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLL 352
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EM+ + P+ YN + AL S A V+++M G D TFS L S +
Sbjct: 353 SEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGG-CDPDAITFSTLISGLCQ 411
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLY-------------------GQT----- 277
G ++AER L+E + +LS+Y LI + G T
Sbjct: 412 EGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVT 471
Query: 278 -----------GNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 324
G +SE + + R P+ ANI Y +I L K LP A +E
Sbjct: 472 FGALIHGLVVAGQVSEALLVREKMAARQLLPD-ANI-YNVLISGLCKKKMLPAARNLIEE 529
Query: 325 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 384
D V +I + + L+ A ++ E ++G P+ + Y + G
Sbjct: 530 MLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGM 589
Query: 385 MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLG 444
M AV+C+ GR +P T T + + ++ ++ GA L + K
Sbjct: 590 MNEAVECMSTMRKVGR------IPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPN 643
Query: 445 VEVFEPLIRTYAAAGRT 461
V + LI Y G T
Sbjct: 644 VVAYSSLINGYCKLGDT 660
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 115/277 (41%), Gaps = 6/277 (2%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMK--ELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+T+ +L++ C+E ++AE LL + ELN SS + SL+ + G ++
Sbjct: 400 ITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSS--YTSLIHGFCVRGEVIVASNLL 457
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EM PD T+ + L +S A V E+M ++ D ++ L S +
Sbjct: 458 VEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAAR-QLLPDANIYNVLISGLCK 516
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
+ A ++E+ +N H D Y LI + + +L E +I+ + + +
Sbjct: 517 KKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVG 576
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y MI+ + A +C D +IG YAK+G + A L
Sbjct: 577 YNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMM 636
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 398
+R PN + + Y + GD A +CL ++++
Sbjct: 637 KRRCQPNVVAYSSLINGYCKLGDTD-AAECLFGSMES 672
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 104/258 (40%), Gaps = 1/258 (0%)
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
E + N +Y SL++ +C A LL +M E + F +L+ G +
Sbjct: 429 ELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEA 488
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
+ ++M A ++PD+ YNV + L + A +IEEM V D ++ L
Sbjct: 489 LLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQ-NVHPDKYVYTTLID 547
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
++ ++A + + +E + H D+ Y +I Y Q G ++E ++R
Sbjct: 548 GFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIP 607
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
+Y +I ++ GA + ++ + +I Y K G + AE L
Sbjct: 608 DEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLF 667
Query: 358 ERARRRGADPNAKTWEIF 375
+G PN T+ I
Sbjct: 668 GSMESQGLFPNVITYTIL 685
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 113/273 (41%), Gaps = 13/273 (4%)
Query: 106 IDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNS 163
+ A N V++ E + + +T+G+L++ +A + EKM L + +N
Sbjct: 450 VIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNV 509
Query: 164 LMTLYAKTGHPEKIPA---IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
L++ K + +PA +I+EM ++ PD Y Y + + A ++ E M+
Sbjct: 510 LISGLCKK---KMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFME 566
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
+ G + D ++ + Y + G+ +A + + D Y LI Y + GN+
Sbjct: 567 QKG-IHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNI 625
Query: 281 SEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 338
S + + R PN ++Y ++I L D AE F ES ++
Sbjct: 626 SGALSLLCDMMKRRCQPNV--VAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYT 683
Query: 339 VMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
++IG+ K+ ++ A E PN T
Sbjct: 684 ILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYT 716
>gi|242093812|ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
gi|241915619|gb|EER88763.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
Length = 786
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/363 (20%), Positives = 156/363 (42%), Gaps = 13/363 (3%)
Query: 106 IDAAENYFVDLPETSKNH----LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPF 161
+D A +F DL ++ H +TY +LL + K +A +L++M++ ++ +
Sbjct: 260 VDEAVAFFEDL--KARGHTPCVVTYNALLQVFGKAGNYTEALRVLKEMEQDGCQPDAVTY 317
Query: 162 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 221
N L YA+ G E+ + M + ++P+++TYN M A + + A + ++MK+
Sbjct: 318 NELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQMKK 377
Query: 222 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 281
G V + T++ + + + F L E+ + + ++ + G+ G
Sbjct: 378 SGCV-PNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMED 436
Query: 282 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 341
V R+ ++ + +Y +I A K + E S + N ++
Sbjct: 437 YVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALL 496
Query: 342 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRG 401
+++G A+ + + R +G PN +++ + Y + G++ +D +EK +
Sbjct: 497 NVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIA-GIDAIEKEV----- 550
Query: 402 DGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 461
GG PS +RT + + + + G E + +K + + +F ++ YA G
Sbjct: 551 YGGTVFPSWVILRTLVIANFKCRRLGGIEKAFQEVKARGYNPDLVIFNSMLSMYAKNGMY 610
Query: 462 SPV 464
S V
Sbjct: 611 SKV 613
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 70/343 (20%), Positives = 137/343 (39%), Gaps = 38/343 (11%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLN 131
AL L + M+K G V+ L ++ K ++ + + N +T+ ++L
Sbjct: 368 ALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLA 427
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
K M + +LE MK + S +N+L+ Y + G + EM ++ P
Sbjct: 428 VCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAP 487
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG------LF 245
TYN + L+ D S A+ ++ +M+ G D ++S L Y + G
Sbjct: 488 CLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPND-QSYSLLLQCYAKGGNIAGIDAI 546
Query: 246 EK-----------------------------AERALKELENRNAHRDLSAYQFLITLYGQ 276
EK E+A +E++ R + DL + ++++Y +
Sbjct: 547 EKEVYGGTVFPSWVILRTLVIANFKCRRLGGIEKAFQEVKARGYNPDLVIFNSMLSMYAK 606
Query: 277 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 336
G S+V I+ S++ + + I+Y +++ + + AEK + +S D+
Sbjct: 607 NGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVS 666
Query: 337 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 379
N +I + K+G ++ A+ + G P T+ Y
Sbjct: 667 YNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGY 709
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 104/250 (41%), Gaps = 37/250 (14%)
Query: 124 LTYGSLLNCYCKELMT-EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQ 182
+TY +L+ Y + + + ALL++M+ + ++++ + G ++ A +
Sbjct: 209 VTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDDFTASTVIAACCRDGLVDEAVAFFE 268
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
++KA P TYN ++ + + A RV++EM++DG D T++ LA Y A
Sbjct: 269 DLKARGHTPCVVTYNALLQVFGKAGNYTEALRVLKEMEQDG-CQPDAVTYNELAGTYARA 327
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY 302
G +E+A + L + ++ + Y ++T YG G + E ++ ++
Sbjct: 328 GFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQMK----------- 376
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+SGC ++ N ++G K+ R E+ R
Sbjct: 377 -----------------------KSGCVP-NVNTYNFILGMLGKKSRFTVMLEMLGEMSR 412
Query: 363 RGADPNAKTW 372
G PN TW
Sbjct: 413 SGCTPNRVTW 422
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 1/136 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+ + S+L+ Y K M K + + +K+ L + +NSLM +YAK + I+ +
Sbjct: 595 VIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQ 654
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
+K+S + PD +YN + I A+R++ EM DG +A T+ L Y
Sbjct: 655 LKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADG-MAPCVVTYHTLVGGYASLE 713
Query: 244 LFEKAERALKELENRN 259
+F +A + + N
Sbjct: 714 MFSEAREVINYMIQHN 729
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 65/346 (18%), Positives = 131/346 (37%), Gaps = 44/346 (12%)
Query: 116 LPETSKNHL-TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP 174
LP S+ + Y ++L+ + E+A L +++ + + + +N ++ +Y + G
Sbjct: 165 LPPGSRLDVRAYTTVLHALSRAGRYERAVELFAELRRQGVAPTLVTYNVVLDVYGRMGRS 224
Query: 175 -EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFS 233
+I A++ EM+A+ + PD +T A VI RDG
Sbjct: 225 WPRIVALLDEMRAAGVEPDDFT----------------ASTVIAACCRDG---------- 258
Query: 234 NLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 293
L ++A ++L+ R + Y L+ ++G+ GN +E R+ + +
Sbjct: 259 ----------LVDEAVAFFEDLKARGHTPCVVTYNALLQVFGKAGNYTEALRVLKEMEQD 308
Query: 294 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
++Y + A KC S + N ++ AY G+++ A
Sbjct: 309 GCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDEA 368
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETI 413
L ++ ++ G PN T+ + + ++ L + +G P+ T
Sbjct: 369 LALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSG------CTPNRVTW 422
Query: 414 RTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
T + + D LE +K +L + + LI Y G
Sbjct: 423 NTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCG 468
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 117/310 (37%), Gaps = 27/310 (8%)
Query: 150 KELNLGFSSMPFNSLMTLYAKTGH---PEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV 206
+ L L SS P +L A P IP++++ ++ S + W A A
Sbjct: 76 QALVLAISSHPLPTLPAFLASRRDELLPADIPSLLKALELSGHWEWALALLRWAGAEGAA 135
Query: 207 NDISGAERVIEEMKRDGRVAA----------------DWTTFSNLASIYVEAGLFEKAER 250
D S E V+ + R+G+ A D ++ + AG +E+A
Sbjct: 136 -DASALEMVVRALGREGQHDAVCALLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERAVE 194
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTG-NLSEVYRIWRSLRLAFPNTANISYLNMIQVL 309
EL + L Y ++ +YG+ G + + + +R A + + +I
Sbjct: 195 LFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDDFTASTVIAAC 254
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
+ A F++ ++ T + N ++ + K G A + + + G P+A
Sbjct: 255 CRDGLVDEAVAFFEDLKARGHTPCVVTYNALLQVFGKAGNYTEALRVLKEMEQDGCQPDA 314
Query: 370 KTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 429
T+ + Y R G + A CL+ G +P++ T T M + VD A
Sbjct: 315 VTYNELAGTYARAGFYEEAAKCLDTMTSKG------LLPNAFTYNTVMTAYGNIGKVDEA 368
Query: 430 EGFLEILKKA 439
+ +KK+
Sbjct: 369 LALFDQMKKS 378
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 1/144 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + +TY SL++ Y K + +AE +L ++K + + +N+++ + K G ++
Sbjct: 626 SPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQR 685
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I+ EM A + P TY+ + A++ S A VI M + + T+ + Y
Sbjct: 686 ILSEMIADGMAPCVVTYHTLVGGYASLEMFSEAREVINYMIQHNLKPMEL-TYRRVVDSY 744
Query: 240 VEAGLFEKAERALKELENRNAHRD 263
+A FE+A L E+ + + D
Sbjct: 745 CKAKRFEEARSFLSEVSETDPNFD 768
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 59/138 (42%), Gaps = 6/138 (4%)
Query: 333 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 392
D+R ++ A ++ GR E A EL RR+G P T+ + D Y R G + L
Sbjct: 172 DVRAYTTVLHALSRAGRYERAVELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVAL 231
Query: 393 EKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLI 452
+D R G + P T T + ++ VD A F E LK V + L+
Sbjct: 232 ---LDEMRAAGVE--PDDFTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNALL 286
Query: 453 RTYAAAGRTSPVMLRRLK 470
+ + AG + LR LK
Sbjct: 287 QVFGKAGNYTEA-LRVLK 303
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 134/320 (41%), Gaps = 8/320 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
NH TY LLNC+C+ A A+L KM +L + +SL+ Y + A++
Sbjct: 115 NHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV 174
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+M PD+ T+N + L N S A +I+ M G D T+ + + +
Sbjct: 175 DQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARG-CQPDLFTYGTVVNGLCK 233
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G + A LK++E ++ Y +I + ++ + + ++ + +
Sbjct: 234 RGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFT 293
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y ++I L N A + + ++ N +I A+AKEG+L AE+L +
Sbjct: 294 YNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI 353
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
+R DPN T+ + + + + A + +P T T ++ F
Sbjct: 354 QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSK------DCLPDVVTYNTLIKGFC 407
Query: 422 QEKDV-DGAEGFLEILKKAV 440
+ K V +G E F E+ ++ +
Sbjct: 408 KAKRVEEGMELFREMSQRGL 427
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 125/295 (42%), Gaps = 36/295 (12%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
TYG+++N CK + A +LL+KM++ + + + +N+++ K H + + +
Sbjct: 222 FTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNK 281
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ I PD +TYN + L S A R++ +M + ++ + TF++L + + G
Sbjct: 282 METKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMI-ERKINPNVVTFNSLIDAFAKEG 340
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTAN-- 299
+AE+ E+ R+ ++ Y LI + L E +I+ + + P+
Sbjct: 341 KLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYN 400
Query: 300 -------------------------------ISYLNMIQVLVNLKDLPGAEKCFKEWESG 328
++Y +IQ L D A+K FK+ S
Sbjct: 401 TLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD 460
Query: 329 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
DI ++++ K G+LE A + E ++ +PN T+ I + + G
Sbjct: 461 GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAG 515
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 142/348 (40%), Gaps = 11/348 (3%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
AL L + MEK + V +D + K + +D A + F ++ + TY SL++
Sbjct: 240 ALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLIS 299
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C C A LL M E + + + FNSL+ +AK G + + EM SI P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 359
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
+ TYN + + + A+++ M +D D T++ L + +A E+
Sbjct: 360 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD--CLPDVVTYNTLIKGFCKAKRVEEGME 417
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
+E+ R + Y LI Q G+ +I++ + I+Y ++ L
Sbjct: 418 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 477
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
L A F+ + +I N+MI K G++E+ +L +G PN
Sbjct: 478 KYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVI 537
Query: 371 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 418
+ + R G +K D L + + + DG +P S T +R
Sbjct: 538 IYTTMISGFCRKG-LKEEADALFREM---KEDG--TLPDSGCYNTLIR 579
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 129/300 (43%), Gaps = 3/300 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
A +L +M +R +N V +D AK + AE F ++ + S N +TY SL+N
Sbjct: 310 ASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLIN 369
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C ++A+ + M + + +N+L+ + K E+ + +EM ++
Sbjct: 370 GFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG 429
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
++ TYN ++ L D A+++ ++M DG V D T+S L + G EKA
Sbjct: 430 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG-VPPDIITYSILLDGLCKYGKLEKALVV 488
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
+ L+ ++ Y +I + G + + + ++ SL L I Y MI
Sbjct: 489 FEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCR 548
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
A+ F+E + D N +I A ++G + EL + R G +A T
Sbjct: 549 KGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDAST 608
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 127/314 (40%), Gaps = 42/314 (13%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLM-TLYAKTGHPEKIPAIIQ 182
+T SLLN YC +A AL+++M E+ ++ FN+L+ L+ E + A+I
Sbjct: 152 VTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAV-ALID 210
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAA--------------- 227
M A PD +TY + L DI A ++++M++ G++ A
Sbjct: 211 RMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEK-GKIEANVVIYNTIIDGLCKY 269
Query: 228 --------------------DWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAY 267
D T+++L S G + A R L ++ R + ++ +
Sbjct: 270 KHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTF 329
Query: 268 QFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 325
LI + + G L E +++ + R PN ++Y ++I L A++ F
Sbjct: 330 NSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI--VTYNSLINGFCMHDRLDEAQQIFTLM 387
Query: 326 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 385
S D+ N +I + K R+E EL +RG N T+ + GD
Sbjct: 388 VSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 447
Query: 386 KLAVDCLEKAIDTG 399
+A +K + G
Sbjct: 448 DMAQKIFKKMVSDG 461
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 72/367 (19%), Positives = 137/367 (37%), Gaps = 54/367 (14%)
Query: 136 ELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYT 195
EL + A AL +M + S + F+ L++ AK + + ++ ++M+ I + YT
Sbjct: 59 ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 118
Query: 196 YNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA------------- 242
Y++ + + + A V+ +M + G D T S+L + Y
Sbjct: 119 YSILLNCFCRRSQLPLALAVLGKMMKLG-YEPDIVTLSSLLNGYCHGKRISEAVALVDQM 177
Query: 243 -----------------GLF--EKAERALKELEN---RNAHRDLSAYQFLITLYGQTGNL 280
GLF KA A+ ++ R DL Y ++ + G++
Sbjct: 178 VEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 237
Query: 281 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 340
+ + + + Y +I L K + A F + E+ D+ N +
Sbjct: 238 DLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSL 297
Query: 341 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM----KLAVDCLEKAI 396
I GR +A L R +PN T+ D + + G + KL + ++++I
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 357
Query: 397 DTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL--KKAVDDLGVEVFEPLIRT 454
D P+ T + + F +D A+ ++ K + D V + LI+
Sbjct: 358 D----------PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD--VVTYNTLIKG 405
Query: 455 YAAAGRT 461
+ A R
Sbjct: 406 FCKAKRV 412
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 65/132 (49%), Gaps = 2/132 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
AL + E ++K M + I ++ + K ++ + F + L N + Y ++++
Sbjct: 485 ALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMIS 544
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C++ + E+A+AL +MKE S +N+L+ + G +I+EM++ +
Sbjct: 545 GFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVG 604
Query: 192 DSYTYNVWMRAL 203
D+ T ++ + L
Sbjct: 605 DASTISMVINML 616
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 118/265 (44%), Gaps = 1/265 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+ Y SL++ C+ ++A ++M+ + +NSL+ ++ G +++ +
Sbjct: 1121 VVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNL 1180
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M PD++T+ + + L + A++++E M+ G+ D T++ L + G
Sbjct: 1181 MVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGK-EPDILTYNTLMNGLCLVG 1239
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
E A + + L +R ++ +Y LI Y + + E +R + +R + ++Y
Sbjct: 1240 QLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYN 1299
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I L + A+K F E ++ + V++ K G LE A +L + ++
Sbjct: 1300 TLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKT 1359
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLA 388
PN + + I D R G ++ A
Sbjct: 1360 EHKPNIEVFSILLDGMCRAGKLEEA 1384
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 100/245 (40%), Gaps = 1/245 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
LTY +L+N C E A L E + + + + +N L+ Y K ++ +E
Sbjct: 1226 LTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEE 1285
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ + P + TYN + AL + A+++ EM+ G+ +T+ L + G
Sbjct: 1286 MRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLK-LSTYCVLLDGLCKNG 1344
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
E+A + ++ ++ + L+ + G L E ++ + + I+Y
Sbjct: 1345 HLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYN 1404
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I L N L A K + E D NV+I KE + A +L E R R
Sbjct: 1405 ILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNR 1464
Query: 364 GADPN 368
P+
Sbjct: 1465 NFSPD 1469
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 5/203 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHL---TYGSLL 130
A + E M +G+ + + + + + A+ FV++ +T L TY LL
Sbjct: 1279 AFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEM-QTCGQFLKLSTYCVLL 1337
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
+ CK E+A L + +K+ + F+ L+ + G E+ E+ + +
Sbjct: 1338 DGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLE 1397
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
PD+ YN+ + L +S A +++ +M+ G D TF+ + ++ +A +
Sbjct: 1398 PDTIAYNILINGLCNKGMLSEAVKLLWQMEEKG-CLPDSITFNVIIQNLLKENEIHEAIQ 1456
Query: 251 ALKELENRNAHRDLSAYQFLITL 273
L+E+ NRN D + L+ L
Sbjct: 1457 LLEEMRNRNFSPDEAVTSMLLCL 1479
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 99/269 (36%), Gaps = 14/269 (5%)
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA---GLFEK 247
PD+ T ++ + N I A ++ +EM + G + D T+ L + +A GL K
Sbjct: 1014 PDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKG-LLGDAKTYGILINGLCKARKTGLAIK 1072
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 307
+K N D+ Y +I + G +E ++ + A + Y +++
Sbjct: 1073 LHEKMKG----NCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMD 1128
Query: 308 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
L L A + FKE E + D+ N +I ++ G + RG P
Sbjct: 1129 GLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSP 1188
Query: 368 NAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVD 427
+A T+ I D + G + A LE G+ P T T M ++
Sbjct: 1189 DAFTFTILIDGLCKEGKVGEAQQILELMRHKGKE------PDILTYNTLMNGLCLVGQLE 1242
Query: 428 GAEGFLEILKKAVDDLGVEVFEPLIRTYA 456
A E L L V + LI Y
Sbjct: 1243 DATKLFESLADRGIKLNVFSYNILINGYC 1271
>gi|15238925|ref|NP_199046.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75154282|sp|Q8L844.1|PP413_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g42310, mitochondrial; Flags: Precursor
gi|21539517|gb|AAM53311.1| maize crp1 protein-like [Arabidopsis thaliana]
gi|332007411|gb|AED94794.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 709
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 127/279 (45%), Gaps = 9/279 (3%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
T S+++ T +AEAL E++++ + + +N+L+ Y KTG + +++ EM
Sbjct: 306 TLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEM 365
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ + PD +TY++ + A A V++EM+ G V + FS L + + + G
Sbjct: 366 EKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEA-GDVQPNSFVFSRLLAGFRDRGE 424
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
++K + LKE+++ D Y +I +G+ L + + +++
Sbjct: 425 WQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNT 484
Query: 305 MIQVLVNLKDLPGAEKCFKEWES----GCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
+I AE+ F+ E CAT N+MI +Y + R ++ + L +
Sbjct: 485 LIDCHCKHGRHIVAEEMFEAMERRGCLPCAT----TYNIMINSYGDQERWDDMKRLLGKM 540
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ +G PN T D Y ++G A++CLE+ G
Sbjct: 541 KSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVG 579
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 133/319 (41%), Gaps = 7/319 (2%)
Query: 141 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 200
KA LL + L + S+++ A +G + A+ +E++ S I P + YN +
Sbjct: 287 KALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALL 346
Query: 201 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 260
+ + AE ++ EM++ G V+ D T+S L YV AG +E A LKE+E +
Sbjct: 347 KGYVKTGPLKDAESMVSEMEKRG-VSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDV 405
Query: 261 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 320
+ + L+ + G + +++ + ++ Y +I L A
Sbjct: 406 QPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMT 465
Query: 321 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 380
F S D N +I + K GR AEE+ E RRG P A T+ I + Y
Sbjct: 466 TFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSY- 524
Query: 381 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 440
GD + D +++ + + G +P+ T T + + + + A LE +K
Sbjct: 525 --GDQE-RWDDMKRLLGKMKSQG--ILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVG 579
Query: 441 DDLGVEVFEPLIRTYAAAG 459
++ LI YA G
Sbjct: 580 LKPSSTMYNALINAYAQRG 598
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 102/237 (43%), Gaps = 5/237 (2%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
S + TY L++ Y E A +L++M+ ++ +S F+ L+ + G +K
Sbjct: 370 VSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTF 429
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+++EMK+ + PD YNV + N + A + M +G + D T++ L
Sbjct: 430 QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEG-IEPDRVTWNTLIDC 488
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPN 296
+ + G AE + +E R + Y +I YG ++ R+ ++ PN
Sbjct: 489 HCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPN 548
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
+++ ++ V A +C +E +S + N +I AYA+ G E A
Sbjct: 549 V--VTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQA 603
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 145/386 (37%), Gaps = 68/386 (17%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKE---------LNLGFSSMP----FNSLMTL--- 167
LTY +L+ + EKA L+ KM++ +L S+ +S+M L
Sbjct: 198 LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLY 257
Query: 168 ---------------------YAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV 206
+AK+G P K ++ +A+ + + T + ALA
Sbjct: 258 KEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADS 317
Query: 207 NDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSA 266
AE + EE+++ G + ++ L YV+ G + AE + E+E R D
Sbjct: 318 GRTLEAEALFEELRQSG-IKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHT 376
Query: 267 YQFLITLYGQTGNLSEVYRIWRSLRLAF---------PNTANISYLNMIQVLVNLKDLPG 317
Y LI Y G W S R+ PN+ S ++L +D
Sbjct: 377 YSLLIDAYVNAGR-------WESARIVLKEMEAGDVQPNSFVFS-----RLLAGFRDRGE 424
Query: 318 AEKCF---KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 374
+K F KE +S D + NV+I + K L++A +R G +P+ TW
Sbjct: 425 WQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNT 484
Query: 375 FSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 434
D + ++G +A + E G +P + T + + ++ D + L
Sbjct: 485 LIDCHCKHGRHIVAEEMFEAMERRG------CLPCATTYNIMINSYGDQERWDDMKRLLG 538
Query: 435 ILKKAVDDLGVEVFEPLIRTYAAAGR 460
+K V L+ Y +GR
Sbjct: 539 KMKSQGILPNVVTHTTLVDVYGKSGR 564
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 105/244 (43%), Gaps = 7/244 (2%)
Query: 142 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 201
A A++ +++ NL FS S+ L G EK+ + ++ P TYN +
Sbjct: 150 AYAVVSWLQKHNLCFSYELLYSI--LIHALGRSEKLYEAFLLSQKQTLTP--LTYNALIG 205
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE--RALKELENRN 259
A A NDI A +I +M++DG +D+ +S + + + R KE+E
Sbjct: 206 ACARNNDIEKALNLIAKMRQDG-YQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDK 264
Query: 260 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 319
D+ +I + ++G+ S+ ++ + + + +++I L + AE
Sbjct: 265 LELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAE 324
Query: 320 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 379
F+E R N ++ Y K G L++AE + +RG P+ T+ + D Y
Sbjct: 325 ALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAY 384
Query: 380 LRNG 383
+ G
Sbjct: 385 VNAG 388
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y +L+N Y + ++E+A M L S + NSL+ + + + A++Q MK
Sbjct: 587 YNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMK 646
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
+ + PD TY M+AL V+ V EEM G
Sbjct: 647 ENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSG 684
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +T+ +L++ Y K A LE+MK + L SS +N+L+ YA+ G E+
Sbjct: 548 NVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAF 607
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+ M + + P N + A + A V++ MK +G V D T++ L +
Sbjct: 608 RVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENG-VKPDVVTYTTLMKALIR 666
Query: 242 AGLFEKAERALKEL 255
F+K +E+
Sbjct: 667 VDKFQKVPVVYEEM 680
>gi|255661176|gb|ACU25757.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 426
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 122/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 6 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 65
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S MPD YN + A +I EM+ G V + ++S L ++Y
Sbjct: 66 IFSRLKRSGFMPDLVAYNAMINVFGXAKLFREARSLISEMRTAG-VMPNTASYSTLLTMY 124
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ +R
Sbjct: 125 VENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 245 MQHRGIEPNSITYSTIISIWGKVGKLDRAAVLFQKLRSSG 284
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 109/221 (49%), Gaps = 20/221 (9%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQHRGIEPNSITYSTIISIWGKVGKLDRAAVL 276
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S + D Y + A ++ A+R++ E+KR + D I
Sbjct: 277 FQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAI-----HILA 331
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + +D++ ++ +I L Y + GN+ EV+ R L FP++
Sbjct: 332 GAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGY-FPDS 390
Query: 298 ANISYLNMIQVLVN----LKDLPGAEKCFKEW-ESGCATYD 333
N+I +++N L + A + E E GC D
Sbjct: 391 ------NVIALVLNAYGKLHEFDKANDVYMEMQEVGCVFSD 425
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 86/202 (42%), Gaps = 8/202 (3%)
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
++ PD YTY+ + A +++M++D RV D +SNL + + + K
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNM 305
A L+ DL AY +I ++G E + +R A PNTA SY +
Sbjct: 63 AISIFSRLKRSGFMPDLVAYNAMINVFGXAKLFREARSLISEMRTAGVMPNTA--SYSTL 120
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
+ + V K A F E D+ N+MI Y + G + A++L R+ G
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180
Query: 366 DPNAKTWEIFSDYYLRNGDMKL 387
+PN ++ Y GD +L
Sbjct: 181 EPNVVSYNTLLRVY---GDAEL 199
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 142/338 (42%), Gaps = 26/338 (7%)
Query: 116 LPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
+P T +TY S+++ +CK+ + AE + M + FN+L+ Y + +
Sbjct: 323 IPST----ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVD 378
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
++ EM + ++ ++ TY + V D++ A+ +++EM G V + T + L
Sbjct: 379 DGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSG-VCPNVVTCNTL 437
Query: 236 ASIYVEAGLFEKAERALKELEN-----------RNAHRDLSAYQFLITLYGQTGNLSEVY 284
+ G + A K ++ D+ Y LI+ G E
Sbjct: 438 LDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAE 497
Query: 285 RIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 342
++ + R P+T I+Y ++I L L A + F S + ++ +I
Sbjct: 498 ELYEEMPHRGIVPDT--ITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLIN 555
Query: 343 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGD 402
Y K GR+++ EL RRG NA T+ + + G++ A+D ++ + +G
Sbjct: 556 GYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASG--- 612
Query: 403 GGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 440
P + TIR + ++++ A LE L+ +V
Sbjct: 613 ---VYPDTITIRNMLTGLWSKEELKRAVAMLEDLQMSV 647
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 85/441 (19%), Positives = 161/441 (36%), Gaps = 62/441 (14%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCY 133
AL + K G + TV + L + I A + F + N +T+ +L+N
Sbjct: 132 ALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM--CKPNVVTFTTLMNGL 189
Query: 134 CKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP----------EKIPAI--- 180
C+E +A ALL++M E L + + + +++ K G E++ I
Sbjct: 190 CREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPN 249
Query: 181 ----------------------------IQEM-KASSIMPDSYTYNVWMRALAAVNDISG 211
+QEM + I PD TYN + A
Sbjct: 250 VVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFE 309
Query: 212 AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 271
AE + +EM G + + T+S++ + + + AE + + D+ + LI
Sbjct: 310 AEELYDEMLPRGIIPST-ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLI 368
Query: 272 TLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCAT 331
Y + + + ++ + A I+Y +I + DL A+ +E S
Sbjct: 369 AGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVC 428
Query: 332 YDIRVTNVMIGAYAKEGRLENAEELKERARR-----------RGADPNAKTWEIFSDYYL 380
++ N ++ G+L++A E+ + ++ G +P+ +T+ I +
Sbjct: 429 PNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLI 488
Query: 381 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 440
G A + E+ G VP + T + + ++ +D A + +
Sbjct: 489 NEGKFLEAEELYEEMPHRG------IVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKS 542
Query: 441 DDLGVEVFEPLIRTYAAAGRT 461
V F LI Y AGR
Sbjct: 543 FSPNVVTFTTLINGYCKAGRV 563
>gi|356517404|ref|XP_003527377.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 696
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 119/261 (45%), Gaps = 1/261 (0%)
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
T +AEAL E+++E + +N+L+ Y KTG + ++ EM+ + + PD TY++
Sbjct: 308 THEAEALFEEIRENGSEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKAGVKPDEQTYSL 367
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
+ A A A V++EM+ V + +S + + Y + G ++K+ + LK++++
Sbjct: 368 LIDAYAHAGRWESARIVLKEMEASN-VEPNSYVYSRILASYRDKGEWQKSFQVLKDMKSN 426
Query: 259 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 318
D Y +I +G+ L + + +++ +I A
Sbjct: 427 GVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLINCHCKSGRHNMA 486
Query: 319 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 378
E+ F E + + I N+MI + ++ R E + + +G PN+ T+ D
Sbjct: 487 EELFGEMQQRGYSPCITTYNIMINSMGEQQRWEQVSLFLSKMQSQGLLPNSITYTTLVDV 546
Query: 379 YLRNGDMKLAVDCLEKAIDTG 399
Y ++G A++CLE TG
Sbjct: 547 YGKSGRFSDAIECLEVLKSTG 567
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 103/231 (44%), Gaps = 5/231 (2%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY L++ Y E A +L++M+ N+ +S ++ ++ Y G +K ++++M
Sbjct: 364 TYSLLIDAYAHAGRWESARIVLKEMEASNVEPNSYVYSRILASYRDKGEWQKSFQVLKDM 423
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
K++ + PD + YNV + N + A E M +G + D T++ L + + ++G
Sbjct: 424 KSNGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEG-IRPDTVTWNTLINCHCKSGR 482
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISY 302
AE E++ R ++ Y +I G+ +V ++ PN+ I+Y
Sbjct: 483 HNMAEELFGEMQQRGYSPCITTYNIMINSMGEQQRWEQVSLFLSKMQSQGLLPNS--ITY 540
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
++ V A +C + +S + N +I AYA+ G E A
Sbjct: 541 TTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSELA 591
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 84/211 (39%), Gaps = 17/211 (8%)
Query: 14 AKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWE-VGDTLKKLRDRKLYY 72
K + ++ E L+ + ++G S N + S +WE V L K++ + L
Sbjct: 478 CKSGRHNMAEELFGEMQQRGYSPCIT--TYNIMINSMGEQQRWEQVSLFLSKMQSQGLLP 535
Query: 73 PALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNC 132
++ + ++ G + SD AI V K G Y +L+N
Sbjct: 536 NSITYTTLVDVYGKSGRFSD-AIECLEVLKSTGFKPTST-------------MYNALINA 581
Query: 133 YCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPD 192
Y + ++E A M L S + NSL+ + + + A++Q MK ++I PD
Sbjct: 582 YAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPD 641
Query: 193 SYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
TY M+AL V V EEM G
Sbjct: 642 VVTYTTLMKALIRVEKFQKVPAVYEEMVTSG 672
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 111/259 (42%), Gaps = 11/259 (4%)
Query: 124 LTYGSLLNCYCKELMTEKA-EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQ 182
L Y L+N + +EK EA L +++ + + +N+L+ A+ G EK ++
Sbjct: 156 LLYSILINALGR---SEKLYEAFLLSQRQV---LTPLTYNALIGACARNGDVEKALNLMS 209
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGA--ERVIEEMKRDGRVAADWTTFSNLASIYV 240
+M+ PD Y+ ++ L N I +++ E++ D ++ D +++ +
Sbjct: 210 KMRRDGYQPDFVNYSSIIQYLTRSNKIDSPILQKLYTEIETD-KIEIDGHLMNDIILGFS 268
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
+AG +A R L ++ + S +I G +G E ++ +R
Sbjct: 269 KAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGSEPRTR 328
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
+Y +++ V L AE E E D + +++I AYA GR E+A + +
Sbjct: 329 AYNALLKGYVKTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDAYAHAGRWESARIVLKEM 388
Query: 361 RRRGADPNAKTWE-IFSDY 378
+PN+ + I + Y
Sbjct: 389 EASNVEPNSYVYSRILASY 407
>gi|255661210|gb|ACU25774.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 426
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 121/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 6 SPDRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 65
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K + I PD YN + A +I EM+ G V D ++S L ++Y
Sbjct: 66 IFSRLKRAGITPDLVAYNSMINVFGKAKLFREARSLISEMREAG-VVPDTVSYSTLLTMY 124
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ E +++ S+R
Sbjct: 125 VENQKFLEALSVFAEMREIKCLVDLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGIEPNV 184
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMMMIYGKTLEHEKANNLIQE 244
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
RG +PNA T+ + + G + A +K +G
Sbjct: 245 MHNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSG 284
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 110/224 (49%), Gaps = 20/224 (8%)
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
+ +N +TY +++ Y K L EKA L+++M + +++ ++++++++ K G ++
Sbjct: 214 DIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHNRGIEPNAITYSTIISIWGKVGKLDRA 273
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
+ Q++++S + D Y + A ++ A+R++ E+KR + D T LA
Sbjct: 274 AMLFQKLRSSGVEIDHVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD-TAIHILAG 332
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAF 294
AG E+A ++ + +D++ ++ +I L Y + N+ EV+ R L F
Sbjct: 333 ----AGRIEEATWVFRQAIDAGEVKDITVFERMIDLFSKYKKYPNVVEVFEKMRGLGY-F 387
Query: 295 PNTANISYLNMIQVLVN----LKDLPGAEKCFKEWES-GCATYD 333
P++ N+I +++N L + A + + + GC D
Sbjct: 388 PDS------NVISLVLNAYGKLHEFDXANDMYMDMQDEGCVFSD 425
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/314 (19%), Positives = 128/314 (40%), Gaps = 15/314 (4%)
Query: 116 LPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
+P+T ++Y +LL Y + +A ++ +M+E+ N ++ +Y + +
Sbjct: 111 VPDT----VSYSTLLTMYVENQKFLEALSVFAEMREIKCLVDLTTCNIMIDVYGQLDMAK 166
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
+ + M+ I P+ +YN +R A + M+R + + T++ +
Sbjct: 167 EADKLFWSMRKVGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKD-IEQNVVTYNTM 225
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
IY + EKA ++E+ NR + Y +I+++G+ G L +++ LR +
Sbjct: 226 MMIYGKTLEHEKANNLIQEMHNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGV 285
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEE 355
++ Y MI + A++ E + +++ GA GR+E A
Sbjct: 286 EIDHVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGA----GRIEEATW 341
Query: 356 LKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRT 415
+ +A G + +E D + + V+ EK RG G + P S I
Sbjct: 342 VFRQAIDAGEVKDITVFERMIDLFSKYKKYPNVVEVFEKM----RGLG--YFPDSNVISL 395
Query: 416 FMRHFEQEKDVDGA 429
+ + + + D A
Sbjct: 396 VLNAYGKLHEFDXA 409
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 83/200 (41%), Gaps = 4/200 (2%)
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
++ PD YTY+ + A +++M++D RV D +SNL + + + K
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEQD-RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 307
A L+ DL AY +I ++G+ E + +R A +SY ++
Sbjct: 63 AISIFSRLKRAGITPDLVAYNSMINVFGKAKLFREARSLISEMREAGVVPDTVSYSTLLT 122
Query: 308 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
+ V + A F E D+ N+MI Y + + A++L R+ G +P
Sbjct: 123 MYVENQKFLEALSVFAEMREIKCLVDLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGIEP 182
Query: 368 NAKTWEIFSDYYLRNGDMKL 387
N ++ Y GD +L
Sbjct: 183 NVVSYNTLLRVY---GDAEL 199
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 126/274 (45%), Gaps = 5/274 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TYG ++N CK T+ A LL KM+ + + FN+++ K H + +
Sbjct: 224 NLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 283
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+EM+ I P+ TY+ + L + S A +++ +M + ++ + TF+ L +V+
Sbjct: 284 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI-EKKINPNLVTFNALIDAFVK 342
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTAN 299
G F +AE+ ++ R+ D+ Y L+ + L + +++ + + FP+
Sbjct: 343 EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDV-- 400
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
++Y +I+ K + + F+E D +I +G +NA+++ ++
Sbjct: 401 VTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 460
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
G P+ T+ I D NG ++ A++ +
Sbjct: 461 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 494
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 143/355 (40%), Gaps = 11/355 (3%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
AL L ME + V +D + K + +D A N F ++ N +TY SL++
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C C A LL M E + + + FN+L+ + K G + + +M SI P
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 363
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
D +TYN + + + A+++ E M +D D T++ L + ++ E
Sbjct: 364 DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD--CFPDVVTYNTLIKGFCKSKRVEDGTE 421
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
+E+ +R D Y LI G+ ++++ + ++Y ++ L
Sbjct: 422 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 481
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
N L A + F + DI + MI K G++++ +L +G PN
Sbjct: 482 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 541
Query: 371 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKD 425
T+ ++ A L+K + G +P+S T T +R ++ D
Sbjct: 542 TYNTMISGLCSKRLLQEAYALLKKMKEDGP------LPNSGTYNTLIRAHLRDGD 590
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 77/367 (20%), Positives = 147/367 (40%), Gaps = 22/367 (5%)
Query: 29 LFKKGSSDVSVRQQLNQFLKSK---KRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRG 85
L K+G +D+++ LN+ +K V + D+L K R AL L + ME +G
Sbjct: 235 LCKRGDTDLAL-NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD---DALNLFKEMETKG 290
Query: 86 MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAE 143
+ V + + + A D+ E + N +T+ +L++ + KE +AE
Sbjct: 291 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 350
Query: 144 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 203
L + M + ++ +NSL+ + +K + + M + PD TYN ++
Sbjct: 351 KLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 410
Query: 204 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 263
+ + EM G V D T++ L G + A++ K++ + D
Sbjct: 411 CKSKRVEDGTELFREMSHRGLVG-DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 469
Query: 264 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 323
+ Y L+ G L + ++ ++ + Y MI+ + A K
Sbjct: 470 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK------AGKVDD 523
Query: 324 EWESGCATY------DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 377
W+ C+ ++ N MI + L+ A L ++ + G PN+ T+
Sbjct: 524 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIR 583
Query: 378 YYLRNGD 384
+LR+GD
Sbjct: 584 AHLRDGD 590
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 127/312 (40%), Gaps = 8/312 (2%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY L+NC+C+ A ALL KM +L S + +SL+ Y A++ +M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
PD+ T+ + L N S A +++ M + G + T+ + + + G
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG-CQPNLVTYGVVVNGLCKRGD 240
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+ A L ++E D+ + +I + ++ + +++ + ++Y +
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 300
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+I L + A + + ++ N +I A+ KEG+ AE+L + +R
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 424
DP+ T+ + + + + A E + P T T ++ F + K
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSK------DCFPDVVTYNTLIKGFCKSK 414
Query: 425 DV-DGAEGFLEI 435
V DG E F E+
Sbjct: 415 RVEDGTELFREM 426
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 124/287 (43%), Gaps = 4/287 (1%)
Query: 77 LSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYC 134
LS+ +EK+ V+ A+ +D K AE + D+ + S + TY SL+N +C
Sbjct: 318 LSDMIEKKINPNLVTFNAL-IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC 376
Query: 135 KELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSY 194
+KA+ + E M + + +N+L+ + K+ E + +EM ++ D+
Sbjct: 377 MHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 436
Query: 195 TYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE 254
TY ++ L D A++V ++M DG V D T+S L G EKA
Sbjct: 437 TYTTLIQGLFHDGDCDNAQKVFKQMVSDG-VPPDIMTYSILLDGLCNNGKLEKALEVFDY 495
Query: 255 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 314
++ D+ Y +I + G + + + ++ SL L ++Y MI L + +
Sbjct: 496 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL 555
Query: 315 LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
L A K+ + + N +I A+ ++G + EL R
Sbjct: 556 LQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMR 602
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/334 (20%), Positives = 137/334 (41%), Gaps = 16/334 (4%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLM-TLYAKTGHPEKIPAIIQ 182
+T SLLN YC A AL+++M E+ ++ F +L+ L+ E + A++
Sbjct: 156 VTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV-ALVD 214
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
M P+ TY V + L D A ++ +M+ ++ AD F+ + +
Sbjct: 215 RMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEA-AKIEADVVIFNTIIDSLCKY 273
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY 302
+ A KE+E + ++ Y LI+ G S+ ++ + N +++
Sbjct: 274 RHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTF 333
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+I V AEK + + DI N ++ + RL+ A+++ E
Sbjct: 334 NALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVS 393
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ 422
+ P+ T+ + ++ ++ + + + RG V + T T ++
Sbjct: 394 KDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM--SHRG----LVGDTVTYTTLIQGLFH 447
Query: 423 EKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYA 456
+ D D A+ ++ K+ V D GV P I TY+
Sbjct: 448 DGDCDNAQ---KVFKQMVSD-GV---PPDIMTYS 474
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 66/346 (19%), Positives = 127/346 (36%), Gaps = 54/346 (15%)
Query: 157 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
S + FN L++ AK + + ++ ++M+ I+ YTYN+ + + IS A ++
Sbjct: 84 SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALL 143
Query: 217 EEMKRDGRVAADWTTFSNLASIYVEA------------------------------GLF- 245
+M + G T S+L + Y GLF
Sbjct: 144 GKMMKLG-YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 246 -EKAERALKELE---NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
KA A+ ++ R +L Y ++ + G+ + + A +
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
+ +I L + + A FKE E+ ++ + +I GR +A +L
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 362 RRGADPNAKTWEIFSDYYLRNGDM----KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 417
+ +PN T+ D +++ G KL D ++++ID P T + +
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID----------PDIFTYNSLV 372
Query: 418 RHFEQEKDVDGAEGFLEIL--KKAVDDLGVEVFEPLIRTYAAAGRT 461
F +D A+ E + K D V + LI+ + + R
Sbjct: 373 NGFCMHDRLDKAKQMFEFMVSKDCFPD--VVTYNTLIKGFCKSKRV 416
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
AL++ + M+K + + ++ + K +D + F + L N +TY ++++
Sbjct: 489 ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 548
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C + + ++A ALL+KMKE +S +N+L+ + + G +I+EM++ +
Sbjct: 549 GLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVG 608
Query: 192 DSYT 195
D+ T
Sbjct: 609 DAST 612
>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
Japonica Group]
gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
Length = 551
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 110/256 (42%), Gaps = 5/256 (1%)
Query: 141 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 200
K EA+ E+MK NL ++S++ Y + G+ + + E + I P+ +TY +
Sbjct: 231 KVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALI 290
Query: 201 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 260
+ + AE ++ +M+ G V + F+ + Y + +KA +E
Sbjct: 291 NGFCKIGQMEAAEMLVTDMQVRG-VGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGI 349
Query: 261 HRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGA 318
D+ Y L + + E + R + + PN ++SY +I + N D+ A
Sbjct: 350 ELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPN--HVSYTTLISIHCNEGDMVEA 407
Query: 319 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 378
+ F+E A + NVM+ Y K+G + AE K ++G P+ ++
Sbjct: 408 RRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHG 467
Query: 379 YLRNGDMKLAVDCLEK 394
+ NG + +A+ E+
Sbjct: 468 HCVNGKVDVALRLFEE 483
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 110/249 (44%), Gaps = 5/249 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N TYG+L+N +CK E AE L+ M+ +G + + FN+++ Y + +K I
Sbjct: 282 NEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIK 341
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M+ I D YTYN L N + A+ ++ M G V + +++ L SI+
Sbjct: 342 MIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKG-VRPNHVSYTTLISIHCN 400
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTAN 299
G +A R +E+ A L Y ++ Y + G++ E R + + P+
Sbjct: 401 EGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDI-- 458
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
SY ++ + A + F+E + + ++ +I AKEGR E A +L +
Sbjct: 459 YSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDN 518
Query: 360 ARRRGADPN 368
G P+
Sbjct: 519 MLGDGLTPD 527
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 116/292 (39%), Gaps = 7/292 (2%)
Query: 94 AIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELN 153
A HLD A D + P+ S L+ +++ YCK A LL++M
Sbjct: 120 AGHLDTAA-----DLLKQAATSCPD-SVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHG 173
Query: 154 LGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAE 213
+ +++ +NSL+ Y + +++ +++ M+ I P TY + + L+A DI+ E
Sbjct: 174 VKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVE 233
Query: 214 RVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITL 273
V EEMK ++ D +S++ + Y AG +A E + Y LI
Sbjct: 234 AVFEEMKSK-NLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALING 292
Query: 274 YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYD 333
+ + G + + +++ I + MI + A + E D
Sbjct: 293 FCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELD 352
Query: 334 IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 385
+ N + + R++ A+ L +G PN ++ + GDM
Sbjct: 353 VYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDM 404
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 3/177 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL++ MEK G+ V + + +D A+N + E NH++Y +L++
Sbjct: 337 ALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLIS 396
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C E +A L +M S + +N +M Y K G + EM+ ++P
Sbjct: 397 IHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVP 456
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
D Y+Y + + A R+ EEMK+ G + ++ L S + G E+A
Sbjct: 457 DIYSYAALVHGHCVNGKVDVALRLFEEMKQRGS-KPNLVAYTALISGLAKEGRSEEA 512
>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
Length = 591
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 117/276 (42%), Gaps = 1/276 (0%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
T N TY +++ +CK+ M + A +LL +MK+ ++ +++L+ K E +
Sbjct: 209 TKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVR 268
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+ EM +I P+ T+N + L + AE ++ M G V D T++ +
Sbjct: 269 TLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKG-VDPDVITYNMIIDG 327
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
Y G ++A + N++ D+ +Y LI Y + + E ++ R + +
Sbjct: 328 YGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPS 387
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
++ ++ L L A+ F E S D+ ++G Y K G +E A
Sbjct: 388 IVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFH 447
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
+ RR D N + + D +NG + A EK
Sbjct: 448 KLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEK 483
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/339 (19%), Positives = 138/339 (40%), Gaps = 42/339 (12%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N + YG+++N CK+ T+KA LL M++ + ++ + ++ + K G + +++
Sbjct: 177 NEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLL 236
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EMK SI PD +TY+ + AL ++ + EM + + TF+++ +
Sbjct: 237 NEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIH-LNIYPNVCTFNSVIDGLCK 295
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G E AE ++ + + D+ Y +I YG G + I+ S+
Sbjct: 296 EGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSM----------- 344
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
+N P DI N++I YA++ +++ A ++
Sbjct: 345 --------INKSIEP----------------DIISYNILINGYARQKKIDEAMQVCREIS 380
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
++G P+ T + G K A + ++ + G +P T T + +
Sbjct: 381 QKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGH------IPDLYTHCTLLGGYF 434
Query: 422 QEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 460
+ V+ A L++ +D ++++ +I G+
Sbjct: 435 KNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGK 473
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 128/311 (41%), Gaps = 3/311 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
A L M+++ + + + +D + K+ + F+++ + N T+ S+++
Sbjct: 232 ATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVID 291
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CKE E AE ++ M E + + +N ++ Y G ++ I M SI P
Sbjct: 292 GLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEP 351
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D +YN+ + A I A +V E+ + G + T L ++ E G + A+
Sbjct: 352 DIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLF-ELGRTKSAQNF 410
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
E+ + DL + L+ Y + G + E + L +T Y +I L
Sbjct: 411 FDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCK 470
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
L A F++ D+ MI Y +EG L+ A+++ + G + +T
Sbjct: 471 NGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRT 530
Query: 372 WEIFSDYYLRN 382
+ + +LR+
Sbjct: 531 YNVIVRGFLRS 541
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 81/203 (39%)
Query: 195 TYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE 254
T+ +R L A N + A + +++ R+ + + + + + G +KA L+
Sbjct: 144 TFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRL 203
Query: 255 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 314
+E + + Y +I + + G L + ++ +Y +I L L
Sbjct: 204 MEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQ 263
Query: 315 LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 374
F E ++ N +I KEG++E+AEE+ +G DP+ T+ +
Sbjct: 264 WENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNM 323
Query: 375 FSDYYLRNGDMKLAVDCLEKAID 397
D Y G + A + + I+
Sbjct: 324 IIDGYGLRGQVDRAREIFDSMIN 346
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 51/94 (54%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y ++++ CK +KA A EK+ + L + + ++++ Y + G ++ ++++M+
Sbjct: 461 YTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKME 520
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM 219
+ + D+ TYNV +R N +S + +EE+
Sbjct: 521 DNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEI 554
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/328 (20%), Positives = 135/328 (41%), Gaps = 11/328 (3%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
+ N TY L+ C ++A ++L M+ G + + +N+L+ + + G +
Sbjct: 146 VAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAE 205
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
++ M + P+ T+N + + + A +V +EM R+G +A D +++ L
Sbjct: 206 RLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREG-LAPDGVSYNTLVGG 264
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
Y +AG +A E+ + D+ + LI + + GNL + R +R
Sbjct: 265 YCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMN 324
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+++ +I L A + + N +I Y GR++ A EL
Sbjct: 325 EVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLH 384
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 418
+G P+ T+ Y +N D A + ++ ++ G +P + T + +R
Sbjct: 385 EMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKG------VLPDAITYSSLIR 438
Query: 419 HFEQEKDVDGAEGFLEILKKAVDDLGVE 446
+EK + A +L K + LG++
Sbjct: 439 VLCEEKRLSDA----HVLFKNMIKLGLQ 462
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/290 (20%), Positives = 114/290 (39%), Gaps = 38/290 (13%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +T+ S++N CK E A + ++M L + +N+L+ Y K G + ++
Sbjct: 219 NLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVF 278
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK--------------------- 220
EM IMPD T+ + + ++ A ++ +M+
Sbjct: 279 AEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKK 338
Query: 221 -------------RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAY 267
R R+ ++ L + Y G ++A L E+E + D+ Y
Sbjct: 339 GFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTY 398
Query: 268 QFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 325
+I+ Y + + + + + + + P+ I+Y ++I+VL K L A FK
Sbjct: 399 STIISAYCKNCDTHSAFELNQQMLEKGVLPDA--ITYSSLIRVLCEEKRLSDAHVLFKNM 456
Query: 326 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 375
D +I + KEG +E A L ++ + G P+ T+ +
Sbjct: 457 IKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVL 506
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 118/263 (44%), Gaps = 18/263 (6%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY SL+ C+E A L + M +L L + SL+ + K G+ E+ ++ +
Sbjct: 431 ITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDK 490
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAAD--------WTTFSNL 235
M + ++PD TY+V + L+ A++++ ++ + + A+ + L
Sbjct: 491 MVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAEL 550
Query: 236 ASI------YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS 289
S+ + GL +A++ + + +RN + D S Y LI + + GN+ + +
Sbjct: 551 KSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQ 610
Query: 290 L--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKE 347
+ R PN+ S +++I+ L + A++ ++ + C+ D + +I E
Sbjct: 611 MLQRGFAPNST--STISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNE 668
Query: 348 GRLENAEELKERARRRGADPNAK 370
G ++ ++ + G P+ +
Sbjct: 669 GNVDAVLDVLHGMAKDGLLPSPR 691
>gi|302762967|ref|XP_002964905.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
gi|300167138|gb|EFJ33743.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
Length = 773
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 156/374 (41%), Gaps = 20/374 (5%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +LL+ + E+A + + M E + ++ + SL+ +A + ++ +++E
Sbjct: 189 ITYNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVDTFAGSNQLGRVEELLRE 248
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ PD YN + A A ++ GA V ++M+R G A D T+S L IY G
Sbjct: 249 MEDEGNPPDIAGYNSLIEAYADAGNVHGAAGVFKQMQRGG-CAPDVETYSTLLRIYGNQG 307
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
FE+ ++++ + ++ Y LI ++G+ G E ++ + + + +Y
Sbjct: 308 CFEQVRSLFSDMKDLSTPPTVATYNSLIQVFGEGGYFQESINLFHDMVDSGVKPDDATYS 367
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
++ V A K + + +T + + +I +Y K ++A R R
Sbjct: 368 ALLSVCGRGGLTREAAKIHQHMLTNESTPSLEASAGLISSYGKMAMYKDALVSYYRIREA 427
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQE 423
G DP ++ Y + G A L G P S ++ + M + +
Sbjct: 428 GLDPQVSAYDALIQGYAKGGLYVEAGSTL-----YAMNKAGFQAPVS-SVNSVMEAYSKV 481
Query: 424 KDVDGA-EGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKK 482
D A E F E+ +K ++ E L+ Y G +L K E V + E SK
Sbjct: 482 GLHDEALEFFSELQQKEGSEVDERTHETLLGVYCDMG-----LLEEAKEEFVIIKETSKV 536
Query: 483 -------LLEAICV 489
LL ++CV
Sbjct: 537 PGARVYCLLLSLCV 550
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/342 (19%), Positives = 135/342 (39%), Gaps = 40/342 (11%)
Query: 62 LKKLRDRKLYYPALKLSENMEKRGMNK-TVSDQAIHLDLVAKVQGIDAAENYFVDLPETS 120
++ R ++ AL+L + M+++ K T I + ++ + ++ F D+PE
Sbjct: 53 FREFAARSDWHRALRLFKYMQRQQWCKPTEHIYTIMIGIMGREGLLEKCSEIFEDMPEND 112
Query: 121 K--NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKI 177
N + +L+N Y + E + LL +MK+ + + + +N+++ +K G E +
Sbjct: 113 VKWNVYAFTALINAYGRNGQYEASLHLLARMKKEQVEPNLITYNTVLNACSKGGLDWEGL 172
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
+ +M+ I PD TYN + A ++ + A V + M G V AD T+ +L
Sbjct: 173 LNLFAQMRHEGIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNESG-VVADAVTYKSLVD 231
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
+ + + E L+E+E+ D++ Y LI Y GN+
Sbjct: 232 TFAGSNQLGRVEELLREMEDEGNPPDIAGYNSLIEAYADAGNVH---------------- 275
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
GA FK+ + G D+ + ++ Y +G E L
Sbjct: 276 -------------------GAAGVFKQMQRGGCAPDVETYSTLLRIYGNQGCFEQVRSLF 316
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ P T+ + G + +++ +D+G
Sbjct: 317 SDMKDLSTPPTVATYNSLIQVFGEGGYFQESINLFHDMVDSG 358
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 116/284 (40%), Gaps = 18/284 (6%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY +LL Y + E+ +L MK+L+ + +NSL+ ++ + G+ ++ + +M
Sbjct: 295 TYSTLLRIYGNQGCFEQVRSLFSDMKDLSTPPTVATYNSLIQVFGEGGYFQESINLFHDM 354
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFS-----NLASIY 239
S + PD TY+ AL +V G R E K + + +T S L S Y
Sbjct: 355 VDSGVKPDDATYS----ALLSVCGRGGLTR--EAAKIHQHMLTNESTPSLEASAGLISSY 408
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
+ +++ A + + +SAY LI Y + G E ++ A A
Sbjct: 409 GKMAMYKDALVSYYRIREAGLDPQVSAYDALIQGYAKGGLYVEAGSTLYAMNKA-GFQAP 467
Query: 300 ISYLNMIQVL---VNLKDLPGAEKCFKEWESGCAT-YDIRVTNVMIGAYAKEGRLENAEE 355
+S +N + V L D A + F E + + D R ++G Y G LE A+E
Sbjct: 468 VSSVNSVMEAYSKVGLHD--EALEFFSELQQKEGSEVDERTHETLLGVYCDMGLLEEAKE 525
Query: 356 LKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ P A+ + + +R A L++ I G
Sbjct: 526 EFVIIKETSKVPGARVYCLLLSLCVRRSKWDYATQLLDEMIAAG 569
>gi|111154024|dbj|BAF02664.1| pentatricopeptide repeat protein [Physcomitrella patens]
gi|111185880|dbj|BAF02672.1| pentatricopeptide repeat protein [Physcomitrella patens]
Length = 531
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 111/240 (46%), Gaps = 3/240 (1%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y +L+ Y K +T+ +LE MK + S+ +N+L+ +++K PEK A++Q M+
Sbjct: 287 YAALVAAYGKAGLTDNVNKILETMKASGVEASTTLYNTLINIHSKAEAPEKARAVLQLMQ 346
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
A D TY M A + AE ++ EMKR G + ++ L S Y AG
Sbjct: 347 ADGCQCDEITYTSVMEAYSRNKQPLMAESMMGEMKRAG-IQPGPVSYGVLISAYCRAGRL 405
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
AER L+ ++N + Y +I+ Y S+ R++++++ +++ +
Sbjct: 406 GDAERILRAMQNAKCKPTVEIYNMMISGYASAKMRSQAERMFQTMQDCGLRPDAVTFNTL 465
Query: 306 IQVLVNLKDLPGAEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
I + + + AE C+ + GC + +++ AY +AE ++ R+ G
Sbjct: 466 ISMYIKSRKRKQAEDCYIRMQQLGCKPNAV-TYKILLKAYTDYNNSIDAERIRLDMRKAG 524
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 118/261 (45%), Gaps = 6/261 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ + Y +L++ Y +E + E+AE L M ++ + P+ +L+ Y K G + + I+
Sbjct: 249 DAIAYTALVHAYAQEGLWEEAEKTLSDMLDVGI-VDDRPYAALVAAYGKAGLTDNVNKIL 307
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+ MKAS + + YN + + A V++ M+ DG D T++++ Y
Sbjct: 308 ETMKASGVEASTTLYNTLINIHSKAEAPEKARAVLQLMQADG-CQCDEITYTSVMEAYSR 366
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
AE + E++ +Y LI+ Y + G L + RI R+++ A
Sbjct: 367 NKQPLMAESMMGEMKRAGIQPGPVSYGVLISAYCRAGRLGDAERILRAMQNAKCKPTVEI 426
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y MI + K AE+ F+ + D N +I Y K + + AE+ R +
Sbjct: 427 YNMMISGYASAKMRSQAERMFQTMQDCGLRPDAVTFNTLISMYIKSRKRKQAEDCYIRMQ 486
Query: 362 RRGADPNAKTWEI----FSDY 378
+ G PNA T++I ++DY
Sbjct: 487 QLGCKPNAVTYKILLKAYTDY 507
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 79/172 (45%), Gaps = 1/172 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ +TY S++ Y + AE+++ +MK + + + L++ Y + G I+
Sbjct: 353 DEITYTSVMEAYSRNKQPLMAESMMGEMKRAGIQPGPVSYGVLISAYCRAGRLGDAERIL 412
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+ M+ + P YN+ + A+ S AER+ + M+ D + D TF+ L S+Y++
Sbjct: 413 RAMQNAKCKPTVEIYNMMISGYASAKMRSQAERMFQTMQ-DCGLRPDAVTFNTLISMYIK 471
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 293
+ ++AE ++ + Y+ L+ Y N + RI +R A
Sbjct: 472 SRKRKQAEDCYIRMQQLGCKPNAVTYKILLKAYTDYNNSIDAERIRLDMRKA 523
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 55/274 (20%), Positives = 102/274 (37%), Gaps = 42/274 (15%)
Query: 146 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 205
LE +LN S +NS + K G I + + + + PD +Y ++
Sbjct: 136 LEDDSQLN---SVKDYNSALLNCVKDGRMRDAMTIFKRFEGAGLKPDVVSYTALIQGFGK 192
Query: 206 VNDISGAERVIEEMKRDGRVAADW-------TTFSN------------------------ 234
+ + V M+R+ R D +T+ N
Sbjct: 193 LKSYNKVTDVFSRMQRN-RCPPDLKLCTVLISTYGNGGLPVLAESAMQYAQAQGLQPDAI 251
Query: 235 ----LASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
L Y + GL+E+AE+ L ++ + D Y L+ YG+ G V +I ++
Sbjct: 252 AYTALVHAYAQEGLWEEAEKTLSDMLDVGIVDD-RPYAALVAAYGKAGLTDNVNKILETM 310
Query: 291 RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES-GCATYDIRVTNVMIGAYAKEGR 349
+ + + Y +I + + A + ++ GC +I T+VM AY++ +
Sbjct: 311 KASGVEASTTLYNTLINIHSKAEAPEKARAVLQLMQADGCQCDEITYTSVM-EAYSRNKQ 369
Query: 350 LENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
AE + +R G P ++ + Y R G
Sbjct: 370 PLMAESMMGEMKRAGIQPGPVSYGVLISAYCRAG 403
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 126/274 (45%), Gaps = 5/274 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TYG ++N CK T+ A LL KM+ + + FN+++ K H + +
Sbjct: 186 NLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 245
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+EM+ I P+ TY+ + L + S A +++ +M + ++ + TF+ L +V+
Sbjct: 246 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI-EKKINPNLVTFNALIDAFVK 304
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTAN 299
G F +AE+ ++ R+ D+ Y L+ + L + +++ + + FP+
Sbjct: 305 EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDV-- 362
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
++Y +I+ K + + F+E D +I +G +NA+++ ++
Sbjct: 363 VTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 422
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
G P+ T+ I D NG ++ A++ +
Sbjct: 423 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 456
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 143/355 (40%), Gaps = 11/355 (3%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
AL L ME + V +D + K + +D A N F ++ N +TY SL++
Sbjct: 206 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 265
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C C A LL M E + + + FN+L+ + K G + + +M SI P
Sbjct: 266 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 325
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
D +TYN + + + A+++ E M +D D T++ L + ++ E
Sbjct: 326 DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD--CFPDVVTYNTLIKGFCKSKRVEDGTE 383
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
+E+ +R D Y LI G+ ++++ + ++Y ++ L
Sbjct: 384 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 443
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
N L A + F + DI + MI K G++++ +L +G PN
Sbjct: 444 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 503
Query: 371 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKD 425
T+ ++ A L+K + G +P+S T T +R ++ D
Sbjct: 504 TYNTMISGLCSKRLLQEAYALLKKMKEDGP------LPNSGTYNTLIRAHLRDGD 552
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 77/367 (20%), Positives = 147/367 (40%), Gaps = 22/367 (5%)
Query: 29 LFKKGSSDVSVRQQLNQFLKSK---KRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRG 85
L K+G +D+++ LN+ +K V + D+L K R AL L + ME +G
Sbjct: 197 LCKRGDTDLAL-NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD---DALNLFKEMETKG 252
Query: 86 MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAE 143
+ V + + + A D+ E + N +T+ +L++ + KE +AE
Sbjct: 253 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 312
Query: 144 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 203
L + M + ++ +NSL+ + +K + + M + PD TYN ++
Sbjct: 313 KLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 372
Query: 204 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 263
+ + EM G V D T++ L G + A++ K++ + D
Sbjct: 373 CKSKRVEDGTELFREMSHRGLVG-DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 431
Query: 264 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 323
+ Y L+ G L + ++ ++ + Y MI+ + A K
Sbjct: 432 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK------AGKVDD 485
Query: 324 EWESGCATY------DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 377
W+ C+ ++ N MI + L+ A L ++ + G PN+ T+
Sbjct: 486 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIR 545
Query: 378 YYLRNGD 384
+LR+GD
Sbjct: 546 AHLRDGD 552
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 127/312 (40%), Gaps = 8/312 (2%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY L+NC+C+ A ALL KM +L S + +SL+ Y A++ +M
Sbjct: 84 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 143
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
PD+ T+ + L N S A +++ M + G + T+ + + + G
Sbjct: 144 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG-CQPNLVTYGVVVNGLCKRGD 202
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+ A L ++E D+ + +I + ++ + +++ + ++Y +
Sbjct: 203 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 262
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+I L + A + + ++ N +I A+ KEG+ AE+L + +R
Sbjct: 263 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 322
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 424
DP+ T+ + + + + A E + P T T ++ F + K
Sbjct: 323 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSK------DCFPDVVTYNTLIKGFCKSK 376
Query: 425 DV-DGAEGFLEI 435
V DG E F E+
Sbjct: 377 RVEDGTELFREM 388
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 124/287 (43%), Gaps = 4/287 (1%)
Query: 77 LSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYC 134
LS+ +EK+ V+ A+ +D K AE + D+ + S + TY SL+N +C
Sbjct: 280 LSDMIEKKINPNLVTFNAL-IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC 338
Query: 135 KELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSY 194
+KA+ + E M + + +N+L+ + K+ E + +EM ++ D+
Sbjct: 339 MHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 398
Query: 195 TYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE 254
TY ++ L D A++V ++M DG V D T+S L G EKA
Sbjct: 399 TYTTLIQGLFHDGDCDNAQKVFKQMVSDG-VPPDIMTYSILLDGLCNNGKLEKALEVFDY 457
Query: 255 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 314
++ D+ Y +I + G + + + ++ SL L ++Y MI L + +
Sbjct: 458 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL 517
Query: 315 LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
L A K+ + + N +I A+ ++G + EL R
Sbjct: 518 LQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMR 564
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/334 (20%), Positives = 137/334 (41%), Gaps = 16/334 (4%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLM-TLYAKTGHPEKIPAIIQ 182
+T SLLN YC A AL+++M E+ ++ F +L+ L+ E + A++
Sbjct: 118 VTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV-ALVD 176
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
M P+ TY V + L D A ++ +M+ ++ AD F+ + +
Sbjct: 177 RMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEA-AKIEADVVIFNTIIDSLCKY 235
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY 302
+ A KE+E + ++ Y LI+ G S+ ++ + N +++
Sbjct: 236 RHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTF 295
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+I V AEK + + DI N ++ + RL+ A+++ E
Sbjct: 296 NALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVS 355
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ 422
+ P+ T+ + ++ ++ + + + RG V + T T ++
Sbjct: 356 KDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM--SHRG----LVGDTVTYTTLIQGLFH 409
Query: 423 EKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYA 456
+ D D A+ ++ K+ V D GV P I TY+
Sbjct: 410 DGDCDNAQ---KVFKQMVSD-GV---PPDIMTYS 436
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 66/346 (19%), Positives = 127/346 (36%), Gaps = 54/346 (15%)
Query: 157 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
S + FN L++ AK + + ++ ++M+ I+ YTYN+ + + IS A ++
Sbjct: 46 SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALL 105
Query: 217 EEMKRDGRVAADWTTFSNLASIYVEA------------------------------GLF- 245
+M + G T S+L + Y GLF
Sbjct: 106 GKMMKLG-YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 164
Query: 246 -EKAERALKELE---NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
KA A+ ++ R +L Y ++ + G+ + + A +
Sbjct: 165 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 224
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
+ +I L + + A FKE E+ ++ + +I GR +A +L
Sbjct: 225 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 284
Query: 362 RRGADPNAKTWEIFSDYYLRNGDM----KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 417
+ +PN T+ D +++ G KL D ++++ID P T + +
Sbjct: 285 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID----------PDIFTYNSLV 334
Query: 418 RHFEQEKDVDGAEGFLEIL--KKAVDDLGVEVFEPLIRTYAAAGRT 461
F +D A+ E + K D V + LI+ + + R
Sbjct: 335 NGFCMHDRLDKAKQMFEFMVSKDCFPD--VVTYNTLIKGFCKSKRV 378
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
AL++ + M+K + + ++ + K +D + F + L N +TY ++++
Sbjct: 451 ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 510
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C + + ++A ALL+KMKE +S +N+L+ + + G +I+EM++ +
Sbjct: 511 GLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVG 570
Query: 192 DSYT 195
D+ T
Sbjct: 571 DAST 574
>gi|255661212|gb|ACU25775.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 426
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 121/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 6 SPXRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLYDYSKAIS 65
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S I+PD YN + A +I EM+ G V D ++S L ++Y
Sbjct: 66 IFSRLKRSGIVPDLVAYNSMINVFGKAKLFREARSLISEMRMVG-VVPDTVSYSTLLTMY 124
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ E +++ S+R
Sbjct: 125 VENQKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKMGIEPNV 184
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQE 244
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
RG +PNA T+ + + G + A +K +G
Sbjct: 245 MHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSG 284
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 109/221 (49%), Gaps = 20/221 (9%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY +++ Y K L EKA L+++M + +++ ++++++++ K G ++ +
Sbjct: 217 QNVVTYNTMMMIYGKTLEHEKANNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAML 276
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S + D Y + A ++ A+R++ E+KR + D T LA
Sbjct: 277 FQKLRSSGVEIDHVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD-TAIHILAG--- 332
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + +D++ ++ ++ L Y + N+ EV+ R L FP++
Sbjct: 333 -AGRIEEATWVFRQAIDAGEVKDITVFERMVDLFSKYKKYPNVVEVFEKMRGLGY-FPDS 390
Query: 298 ANISYLNMIQVLVN----LKDLPGAEKCFKEWES-GCATYD 333
N+I +++N L + A + E + GC D
Sbjct: 391 ------NVIALVLNAYGKLHEFDKANDVYLEMQDEGCVFSD 425
>gi|410110061|gb|AFV61110.1| pentatricopeptide repeat-containing protein 123, partial
[Acantholippia seriphioides]
Length = 416
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 121/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 8 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 67
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S PD YN + A +I EMK G V + ++S L ++Y
Sbjct: 68 IFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKXSG-VMPNTASYSTLLTMY 126
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ +R
Sbjct: 127 VENKKFLEALSVFSEMREVKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 186
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N MI Y K E A L +
Sbjct: 187 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQE 246
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 247 MQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 286
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 8/207 (3%)
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
EM+ ++ PD YTY+ + A +++M++D RV D +SNL + +
Sbjct: 1 EMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIELSRKL 59
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANI 300
+ KA L+ DL AY +I ++G+ E + ++ + PNTA
Sbjct: 60 CDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKXSGVMPNTA-- 117
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
SY ++ + V K A F E D+ N+MI Y + G + A++L
Sbjct: 118 SYSTLLTMYVENKKFLEALSVFSEMREVKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM 177
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKL 387
R+ G +PN ++ Y GD +L
Sbjct: 178 RKMGIEPNVVSYNTLLRVY---GDAEL 201
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 96/184 (52%), Gaps = 9/184 (4%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 219 QNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAML 278
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S + D + + A ++ A+R++ E+KR + D T LA
Sbjct: 279 FQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD-TAIHILAG--- 334
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + +D++ ++ +I L Y + N+ EV+ R L FP++
Sbjct: 335 -AGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYANVVEVFDKMRGLGY-FPDS 392
Query: 298 ANIS 301
I+
Sbjct: 393 DVIA 396
>gi|302794911|ref|XP_002979219.1| hypothetical protein SELMODRAFT_110655 [Selaginella moellendorffii]
gi|300152987|gb|EFJ19627.1| hypothetical protein SELMODRAFT_110655 [Selaginella moellendorffii]
Length = 1143
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 140/348 (40%), Gaps = 12/348 (3%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y L + K AE L +M++ L+ Y K G E + + E+
Sbjct: 730 YNQLTINFLKAGQVPPAEMLHSRMQDKGFDVEDSTLGHLIAAYGKAGRYEVLTKLKPELP 789
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
+++ Y+ + AL N + A ++E+M++ G + D S L + Y +AGL
Sbjct: 790 R-----NNFVYSSMVGALINCNQLEKAAGLVEKMRQIG-LKCDSVLVSILLNAYSKAGLV 843
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
E A+ + D+ AY +I + G L + + SL + +Y M
Sbjct: 844 EDADALIHMARGDGIPLDIVAYNTIIKADLRAGRLKKAIDTYSSLTNLGLRPSLQTYDTM 903
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
I V AEK FK+ +S D +V + M+ YAK G E+A +L E + RG
Sbjct: 904 ISVFAKSGRTRDAEKMFKDLKSAGFQPDEKVYSQMMNCYAKSGMYEHAADLFEAMKLRGL 963
Query: 366 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKD 425
P+ ++ D Y R G A L + G PSS T + +
Sbjct: 964 RPHEVSYNNLIDAYARAGQFAKAEQLLVEMAKAG------CPPSSVTFLLLISAYAHRGK 1017
Query: 426 VDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEK 473
+ AE LE ++ A V + ++ ++ A S M LKME+
Sbjct: 1018 CNEAENALERMQTAAIRPTVRHYNEVMLAFSRARLPSQAMESYLKMER 1065
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 112/259 (43%), Gaps = 7/259 (2%)
Query: 117 PETSKNHLTYGSLLNCY--CKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP 174
PE +N+ Y S++ C +L EKA L+EKM+++ L S+ + L+ Y+K G
Sbjct: 786 PELPRNNFVYSSMVGALINCNQL--EKAAGLVEKMRQIGLKCDSVLVSILLNAYSKAGLV 843
Query: 175 EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSN 234
E A+I + I D YN ++A + A + G + T+
Sbjct: 844 EDADALIHMARGDGIPLDIVAYNTIIKADLRAGRLKKAIDTYSSLTNLG-LRPSLQTYDT 902
Query: 235 LASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF 294
+ S++ ++G AE+ K+L++ D Y ++ Y ++G ++ +++L
Sbjct: 903 MISVFAKSGRTRDAEKMFKDLKSAGFQPDEKVYSQMMNCYAKSGMYEHAADLFEAMKLRG 962
Query: 295 PNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENA 353
+SY N+I AE+ E ++GC + ++I AYA G+ A
Sbjct: 963 LRPHEVSYNNLIDAYARAGQFAKAEQLLVEMAKAGCPPSSVTFL-LLISAYAHRGKCNEA 1021
Query: 354 EELKERARRRGADPNAKTW 372
E ER + P + +
Sbjct: 1022 ENALERMQTAAIRPTVRHY 1040
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 150/395 (37%), Gaps = 72/395 (18%)
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 187
+LL+CY K E+A + + E + M +N +++LYA+ E + Q++K+S
Sbjct: 561 TLLHCYVKAGNVERATKTFKTLVESGIA-DLMAYNDMLSLYAEFDMLEDAKLLFQQLKSS 619
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
SI PD + ++ N ++ AE V+ +M+ G D T L + Y EA E+
Sbjct: 620 SIQPDQVWFGTMVKLYCNANMVAAAEEVLRQMREKG-FTPDHITQGILINAYGEANRIEE 678
Query: 248 A----ERALKELENRNA---------------------HR-------DLSAYQFLITLYG 275
A E + KE E+ A HR D +AY L +
Sbjct: 679 AAGLLEASAKEDESEAAAISRIYLCLKFRLFDKATLLLHRVLESFTLDSAAYNQLTINFL 738
Query: 276 QTGNLSEV-------------------------------YRIWRSLRLAFPNTANISYLN 304
+ G + Y + L+ P N Y +
Sbjct: 739 KAGQVPPAEMLHSRMQDKGFDVEDSTLGHLIAAYGKAGRYEVLTKLKPELPRN-NFVYSS 797
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
M+ L+N L A ++ D + ++++ AY+K G +E+A+ L AR G
Sbjct: 798 MVGALINCNQLEKAAGLVEKMRQIGLKCDSVLVSILLNAYSKAGLVEDADALIHMARGDG 857
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 424
+ + LR G +K A+D + G PS +T T + F +
Sbjct: 858 IPLDIVAYNTIIKADLRAGRLKKAIDTYSSLTNLG------LRPSLQTYDTMISVFAKSG 911
Query: 425 DVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
AE + LK A +V+ ++ YA +G
Sbjct: 912 RTRDAEKMFKDLKSAGFQPDEKVYSQMMNCYAKSG 946
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 89/418 (21%), Positives = 178/418 (42%), Gaps = 26/418 (6%)
Query: 25 LYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKR 84
+Y R + G ++ + ++ L+Q L + F + + +++ L + E M R
Sbjct: 285 VYGRDKQIGLAEAAFQEMLDQKLDPDEVAFS----TMILNYANAEMFDEMLTMYEAMMSR 340
Query: 85 GM---NKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK--NHLTYGSLLNCYCKELMT 139
G+ + T + IHL+ K + + A + DL E S + L Y ++ Y K
Sbjct: 341 GIVPSSVTYTTMLIHLN---KAERLADAALLWEDLVEESVELSPLAYALMITIYRKLGRF 397
Query: 140 EKAEALLEKMKELNLGF--SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 197
E+A + E M L G+ S+ +N ++ + K G ++ + M+ + Y+Y
Sbjct: 398 EEALEVFEAM--LGAGYYPDSLIYNMVLHMLGKLGRYDEAVDVFTAMQRQELCTSKYSYA 455
Query: 198 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 257
+ + A + +M+ R D ++++ SIY +AGL+++AE+ +E+
Sbjct: 456 TMLHICEKADKFELAASIFSDMQMK-RCPVDEVVYTSVISIYGKAGLYDEAEKLFQEMNE 514
Query: 258 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 317
D+ + + + + G +E ++ L N + ++ ++ V ++
Sbjct: 515 LRLLVDVKTFSVMANVRLKAGKYNEAVQVMEELLAKGLNLDDTAWKTLLHCYVKAGNVER 574
Query: 318 AEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 376
A K FK ESG A D+ N M+ YA+ LE+A+ L ++ + P+ +
Sbjct: 575 ATKTFKTLVESGIA--DLMAYNDMLSLYAEFDMLEDAKLLFQQLKSSSIQPDQVWFGTMV 632
Query: 377 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 434
Y N +M V E+ + R G + P T + + + ++ A G LE
Sbjct: 633 KLYC-NANM---VAAAEEVLRQMREKG--FTPDHITQGILINAYGEANRIEEAAGLLE 684
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/322 (19%), Positives = 136/322 (42%), Gaps = 10/322 (3%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+ Y LL Y ++ AEA ++M + L + F++++ YA +++ + +
Sbjct: 277 IVYSMLLKVYGRDKQIGLAEAAFQEMLDQKLDPDEVAFSTMILNYANAEMFDEMLTMYEA 336
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + I+P S TY + L ++ A + E++ + V ++ + +IY + G
Sbjct: 337 MMSRGIVPSSVTYTTMLIHLNKAERLADAALLWEDLVEES-VELSPLAYALMITIYRKLG 395
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
FE+A + + + D Y ++ + G+ G E ++ +++ T+ SY
Sbjct: 396 RFEEALEVFEAMLGAGYYPDSLIYNMVLHMLGKLGRYDEAVDVFTAMQRQELCTSKYSYA 455
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
M+ + A F + + D V +I Y K G + AE+L +
Sbjct: 456 TMLHICEKADKFELAASIFSDMQMKRCPVDEVVYTSVISIYGKAGLYDEAEKLFQEMNEL 515
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRG-DGGKWVPSSETIRTFMRHFEQ 422
+ KT+ + ++ L+ G AV +E+ + G D W +T + + +
Sbjct: 516 RLLVDVKTFSVMANVRLKAGKYNEAVQVMEELLAKGLNLDDTAW-------KTLLHCYVK 568
Query: 423 EKDVDGA-EGFLEILKKAVDDL 443
+V+ A + F +++ + DL
Sbjct: 569 AGNVERATKTFKTLVESGIADL 590
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 76/186 (40%), Gaps = 26/186 (13%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY ++++ + K T AE + + +K ++ +M YAK+G E + + M
Sbjct: 899 TYDTMISVFAKSGRTRDAEKMFKDLKSAGFQPDEKVYSQMMNCYAKSGMYEHAADLFEAM 958
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
K + P +YN + A A + AE+++ EM + G TF L S Y G
Sbjct: 959 KLRGLRPHEVSYNNLIDAYARAGQFAKAEQLLVEMAKAG-CPPSSVTFLLLISAYAHRGK 1017
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF-----PNTAN 299
+AE AL+ + QT + R + + LAF P+ A
Sbjct: 1018 CNEAENALERM--------------------QTAAIRPTVRHYNEVMLAFSRARLPSQAM 1057
Query: 300 ISYLNM 305
SYL M
Sbjct: 1058 ESYLKM 1063
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 2/149 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
A+ ++ G+ ++ + + AK AE F DL + Y ++N
Sbjct: 881 AIDTYSSLTNLGLRPSLQTYDTMISVFAKSGRTRDAEKMFKDLKSAGFQPDEKVYSQMMN 940
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CY K M E A L E MK L + +N+L+ YA+ G K ++ EM + P
Sbjct: 941 CYAKSGMYEHAADLFEAMKLRGLRPHEVSYNNLIDAYARAGQFAKAEQLLVEMAKAGCPP 1000
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMK 220
S T+ + + A A + AE +E M+
Sbjct: 1001 SSVTFLLLISAYAHRGKCNEAENALERMQ 1029
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 2/167 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ ++Y +L++ Y + KAE LL +M + SS+ F L++ YA G + +
Sbjct: 966 HEVSYNNLIDAYARAGQFAKAEQLLVEMAKAGCPPSSVTFLLLISAYAHRGKCNEAENAL 1025
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+ M+ ++I P YN M A + S A +M+R G + D + + I +E
Sbjct: 1026 ERMQTAAIRPTVRHYNEVMLAFSRARLPSQAMESYLKMERSG-IQPDVVSSRTMIRILLE 1084
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWR 288
+FE+ K+ E + LS + + LY G E I R
Sbjct: 1085 GSMFEEGLSLYKKTEAKLVSDSLSR-EMVAKLYQGAGKHFEAKYILR 1130
>gi|15225722|ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32630
gi|20197234|gb|AAM14987.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330253613|gb|AEC08707.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 624
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 110/251 (43%), Gaps = 1/251 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY L+ K AE L ++M+E + + SL++ + G+ ++ +
Sbjct: 293 NKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLF 352
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
E+ + P SYTY + + V ++ AE ++ EM+ G V F+ L Y
Sbjct: 353 DELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKG-VNITQVVFNTLIDGYCR 411
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G+ ++A +E + D+ + + + + E + + + +S
Sbjct: 412 KGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVS 471
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y N+I V ++ A++ F E S + NVMI AY K+G+++ A +L+
Sbjct: 472 YTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANME 531
Query: 362 RRGADPNAKTW 372
G DP++ T+
Sbjct: 532 ANGMDPDSYTY 542
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 1/213 (0%)
Query: 169 AKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAAD 228
+ G EK +I+E I P++YTYN + A D SG E V++ MK+DG V +
Sbjct: 235 CRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDG-VVYN 293
Query: 229 WTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWR 288
T++ L + V+ G AE+ E+ R D+ Y LI+ + GN+ + ++
Sbjct: 294 KVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFD 353
Query: 289 SLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEG 348
L + ++ +Y +I + + ++ AE E +S V N +I Y ++G
Sbjct: 354 ELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKG 413
Query: 349 RLENAEELKERARRRGADPNAKTWEIFSDYYLR 381
++ A + + ++G + T + + R
Sbjct: 414 MVDEASMIYDVMEQKGFQADVFTCNTIASCFNR 446
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 135/309 (43%), Gaps = 19/309 (6%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVA---KVQGIDAAENYFVDLPE--TSKNHLTYGS 128
A KL + M +RG+ SD ++ L++ + + A F +L E S + TYG+
Sbjct: 313 AEKLFDEMRERGIE---SDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGA 369
Query: 129 LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS 188
L++ CK AE L+ +M+ + + + FN+L+ Y + G ++ I M+
Sbjct: 370 LIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKG 429
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
D +T N + A++ + M +G V +++NL +Y + G E+A
Sbjct: 430 FQADVFTCNTIASCFNRLKRYDEAKQWLFRM-MEGGVKLSTVSYTNLIDVYCKEGNVEEA 488
Query: 249 ERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQV 308
+R E+ ++ + Y +I Y + G + E ++ ++ + + +Y ++I
Sbjct: 489 KRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHG 548
Query: 309 LVNLKDLPGAEKCFKEW-----ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
++ A + F E + TY VMI +K G+ + A L + +R+
Sbjct: 549 ECIADNVDEAMRLFSEMGLKGLDQNSVTY-----TVMISGLSKAGKSDEAFGLYDEMKRK 603
Query: 364 GADPNAKTW 372
G + K +
Sbjct: 604 GYTIDNKVY 612
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 153/364 (42%), Gaps = 48/364 (13%)
Query: 67 DRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVA--KVQGIDAAENYFVDLPETSKNHL 124
D ++ L++ + M K+G+ ++ +++ + LVA K + ID F + ++
Sbjct: 166 DNGMFEEGLRVFDYMVKKGL--SIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKIT 223
Query: 125 TYG--SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQ 182
Y ++ C+ EK++ L+++ + + +N+++ Y K + +++
Sbjct: 224 VYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLK 283
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
MK ++ + TY + M +S AE++ +EM+ G + +D +++L S
Sbjct: 284 VMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERG-IESDVHVYTSLISWNCRK 342
Query: 243 G-------LFEK----------------------------AERALKELENRNAHRDLSAY 267
G LF++ AE + E++++ + +
Sbjct: 343 GNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVF 402
Query: 268 QFLITLYGQTGNLSEVYRIWRSL-RLAFPNTANISYLNMIQVLVN-LKDLPGAEK-CFKE 324
LI Y + G + E I+ + + F A++ N I N LK A++ F+
Sbjct: 403 NTLIDGYCRKGMVDEASMIYDVMEQKGFQ--ADVFTCNTIASCFNRLKRYDEAKQWLFRM 460
Query: 325 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 384
E G + TN +I Y KEG +E A+ L +G PNA T+ + Y + G
Sbjct: 461 MEGGVKLSTVSYTN-LIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGK 519
Query: 385 MKLA 388
+K A
Sbjct: 520 IKEA 523
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 90/193 (46%), Gaps = 3/193 (1%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELM 138
ME++G V +++ D A+ + + E + ++Y +L++ YCKE
Sbjct: 425 MEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGN 484
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
E+A+ L +M + +++ +N ++ Y K G ++ + M+A+ + PDSYTY
Sbjct: 485 VEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTS 544
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
+ +++ A R+ EM G + + T++ + S +AG ++A E++ +
Sbjct: 545 LIHGECIADNVDEAMRLFSEMGLKG-LDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRK 603
Query: 259 NAHRDLSAYQFLI 271
D Y LI
Sbjct: 604 GYTIDNKVYTALI 616
>gi|255661182|gb|ACU25760.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 426
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 122/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 6 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAIS 65
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S PD YN + A +I EMK G V + T++S L ++Y
Sbjct: 66 IFSRLKNSGYTPDLVAYNAMIIVFGKAKLFREARSLISEMKTAG-VIPNTTSYSTLLTMY 124
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ +R
Sbjct: 125 VENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N MI Y K E A L +
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQE 244
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 245 MQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 284
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 110/221 (49%), Gaps = 20/221 (9%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 217 QNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAML 276
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S + D + + A ++ A+R++ E+KR + D T LA
Sbjct: 277 FQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD-TAIHILAG--- 332
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + +D++ ++ +I L Y + N+ EV+ R L FP++
Sbjct: 333 -AGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYANVVEVFDKMRGLGY-FPDS 390
Query: 298 ANISYLNMIQVLVN----LKDLPGAEKCFKEW-ESGCATYD 333
N+I +++N L + A + E E GC D
Sbjct: 391 ------NVIAIVLNAYGKLHEFDKANDVYMEMQEVGCVFSD 425
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 87/202 (43%), Gaps = 8/202 (3%)
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
++ PD YTY+ + A +++M++D +V D +SNL + + + K
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-QVPGDLVLYSNLIELSRKLCDYSK 62
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNM 305
A L+N DL AY +I ++G+ E + ++ A PNT SY +
Sbjct: 63 AISIFSRLKNSGYTPDLVAYNAMIIVFGKAKLFREARSLISEMKTAGVIPNTT--SYSTL 120
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
+ + V K A F E D+ N+MI Y + G + A++L R+ G
Sbjct: 121 LTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180
Query: 366 DPNAKTWEIFSDYYLRNGDMKL 387
+PN ++ Y GD +L
Sbjct: 181 EPNVVSYNTLLRVY---GDAEL 199
>gi|410110135|gb|AFV61147.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
rotundifolia]
Length = 440
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 122/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 13 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAIS 72
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S PD YN + A +I EMK G V + T++S L ++Y
Sbjct: 73 IFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAG-VMPNTTSYSTLLTMY 131
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ +R
Sbjct: 132 VENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 191
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 192 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 251
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 252 MQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 291
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 111/221 (50%), Gaps = 20/221 (9%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 224 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAML 283
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S + D + + A ++ A+R++ E+KR + D T LA
Sbjct: 284 FQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD-TAIHILAG--- 339
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + ++++ ++ +I L Y + N+ EV+ R L FP++
Sbjct: 340 -AGRIEEATYVFRQAIDAGEVKNIAVFERMIHLLSKYKKYANVVEVFDKMRGLGY-FPDS 397
Query: 298 ANISYLNMIQVLVN----LKDLPGAEKCFKEW-ESGCATYD 333
N+I V++N L++ A + E E GC D
Sbjct: 398 ------NVIAVVLNAYGKLQEFDKANDVYMEMQEVGCVFSD 432
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 90/211 (42%), Gaps = 8/211 (3%)
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+ EM+ ++ PD YTY+ + A +++M++D +V D +SNL +
Sbjct: 2 GLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-QVPGDLVLYSNLIEL 60
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPN 296
+ + KA L+ DL AY +I ++G+ E + ++ A PN
Sbjct: 61 SRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPN 120
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
T SY ++ + V K A F E D+ N+MI Y + G + A++L
Sbjct: 121 TT--SYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 178
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDMKL 387
R+ G +PN ++ Y GD +L
Sbjct: 179 FWGMRKMGIEPNVVSYNTLLRVY---GDAEL 206
>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g64583, mitochondrial; Flags: Precursor
gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
Length = 512
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 130/277 (46%), Gaps = 1/277 (0%)
Query: 114 VDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGH 173
++L S + ++ L++C+C+ A ++L KM +L S + F SL+ +
Sbjct: 97 MELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNR 156
Query: 174 PEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFS 233
+++ M S P+ YN + L +++ A ++ EM++ G + AD T++
Sbjct: 157 IGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKG-LGADVVTYN 215
Query: 234 NLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 293
L + +G + A R L+++ R+ + D+ + LI ++ + GNL E +++ + +
Sbjct: 216 TLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS 275
Query: 294 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
+ N++Y ++I L L A+K F S ++ N +I + K ++
Sbjct: 276 SVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEG 335
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
+L +R G + + T+ Y + G +++A+D
Sbjct: 336 MKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALD 372
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 112/262 (42%), Gaps = 5/262 (1%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +LL C A +L M + ++ + F +L+ ++ K G+ ++ + +E
Sbjct: 212 VTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKE 271
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M SS+ P++ TYN + L + A++ + M G + T++ L S + +
Sbjct: 272 MIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKG-CFPNVVTYNTLISGFCKFR 330
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI--WRSLRLAFPNTANIS 301
+ ++ + + + + D+ Y LI Y Q G L I W R P+ I+
Sbjct: 331 MVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDI--IT 388
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
+ ++ L ++ A F + I N+MI K ++E A EL R
Sbjct: 389 HCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLP 448
Query: 362 RRGADPNAKTWEIFSDYYLRNG 383
G P+A+T+ I +NG
Sbjct: 449 VEGVKPDARTYTIMILGLCKNG 470
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 58/286 (20%), Positives = 106/286 (37%), Gaps = 38/286 (13%)
Query: 140 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 199
E A AL +M S + F L+T A E + Q+M+ I D Y++ +
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112
Query: 200 MRALAAVNDISGAERVIEEMKRDG-------------------RVAADWT---------- 230
+ + +S A V+ +M + G R+ ++
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172
Query: 231 -----TFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 285
++ L + G A L E+E + D+ Y L+T +G S+ R
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 286 IWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 345
+ R + N +++ +I V V +L A++ +KE + N +I
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Query: 346 KEGRLENAEELKERARRRGADPNAKTWEI----FSDYYLRNGDMKL 387
GRL +A++ + +G PN T+ F + + + MKL
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKL 338
>gi|32489921|emb|CAE05513.1| OSJNBa0038P21.6 [Oryza sativa Japonica Group]
Length = 648
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 139/332 (41%), Gaps = 24/332 (7%)
Query: 140 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 199
E A A+ ++ LG +N+L+ ++K G +K + +M S+ PD TYN
Sbjct: 46 ELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSL 105
Query: 200 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 259
+ L ++ +ERV+E+M D + + T+++L Y AG+++++ R KE+ +
Sbjct: 106 IDGLCKTKEMVKSERVLEQMV-DAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSG 164
Query: 260 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 319
+ I + + E I+ S+ L P ISY ++ AE
Sbjct: 165 LIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGY-------AAE 217
Query: 320 KCFKEWESGC-------ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
CF S + R N++I AYA+ G ++ A + E + +G P+ T+
Sbjct: 218 GCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTF 277
Query: 373 EIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETI-RTFMRHFEQEKD-VDGAE 430
R G + A+ +D G VP SE + R ++ + V E
Sbjct: 278 ATVISSLCRIGRLDDALHKFNHMVDIG-------VPPSEAVYRCLIQGCCNHGELVKAKE 330
Query: 431 GFLEILKKAVDDLGVEVFEPLIRTYAAAGRTS 462
E++ K + GV+ F +I GR +
Sbjct: 331 LISEMMNKDIPPPGVKYFSSIINNLFKEGRVA 362
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/356 (20%), Positives = 145/356 (40%), Gaps = 43/356 (12%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL + + + G+ V +D +K +D A F + E S + +TY SL++
Sbjct: 48 ALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLID 107
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK K+E +LE+M + + ++ +NSL+ Y+ G ++ + +EM +S ++P
Sbjct: 108 GLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIP 167
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
N ++ AL N I A+ + + M G + ++S L Y G F
Sbjct: 168 CVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGP-KPNIISYSTLLHGYAAEGCFANMNSL 226
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVL 309
+ + ++ + + LI Y + G + + I+ + + P+T +++ +I L
Sbjct: 227 VNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDT--VTFATVISSL 284
Query: 310 VNLKDL---------------PGAEKCFKEWESGCATY----------------DIRVTN 338
+ L P +E ++ GC + DI
Sbjct: 285 CRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPG 344
Query: 339 V-----MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 389
V +I KEGR+ +++ + + G PN T+ + Y G+M+ A+
Sbjct: 345 VKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAL 400
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 81/171 (47%), Gaps = 3/171 (1%)
Query: 108 AAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLM 165
AA+ F ++ E T+ + TYG +L C+ T++A LLEK+ +N+ F + FN ++
Sbjct: 424 AAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVI 483
Query: 166 TLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRV 225
+ K G ++ + + ++P +TYN+ + L A+ + +++ GR
Sbjct: 484 SAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGR- 542
Query: 226 AADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 276
A D +++ + ++ KA L ++ N + S L +L+ +
Sbjct: 543 APDSRLLNHIVRMLLKKAEVAKASNYLSIIDENNLTLEASTISLLASLFSR 593
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 134/324 (41%), Gaps = 10/324 (3%)
Query: 108 AAENYFVDLPETSK-NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMT 166
AA+ Y + S+ N T +++ YCK L +K +A++ +M++ + + N ++
Sbjct: 140 AADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVD 199
Query: 167 LYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA 226
+ G E A++ M + + P TYN ++ L A V +EM G VA
Sbjct: 200 ARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFG-VA 258
Query: 227 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
D +F+ L + G E+A + KE+ +R DL ++ LI L+ + G +
Sbjct: 259 PDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAY 318
Query: 287 WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY-DIRVTNVMIGAYA 345
R +R + Y +I + A + E GC D+ N ++
Sbjct: 319 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEM-VGCGCLPDVVTYNTLLNGLC 377
Query: 346 KEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGK 405
KE RL +AE L R RG P+ T+ Y G + A+ + ++ +
Sbjct: 378 KERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQ------R 431
Query: 406 WVPSSETIRTFMRHFEQEKDVDGA 429
P T T + ++ D+D A
Sbjct: 432 LRPDIVTYNTLIDGMCRQGDLDKA 455
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 121/276 (43%), Gaps = 1/276 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +LLN CKE AE LL +M+E + F +L+ Y G +K +
Sbjct: 367 VTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDT 426
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + PD TYN + + D+ A + ++M + + T+S L + E G
Sbjct: 427 MLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDM-HSREIFPNHVTYSILIDSHCEKG 485
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
E A L E+ N+ ++ Y +I Y ++GN+S+ + + + + + I+Y
Sbjct: 486 QVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYN 545
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I + + A K E D+ N++I ++ G ++ A + E+ +
Sbjct: 546 TLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAK 605
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
G +P+ T+ + ++ G+ K A ++ + G
Sbjct: 606 GIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 641
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 142/335 (42%), Gaps = 7/335 (2%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
++ L+ +C+ E+A + ++M+ + + F+ L+ L+A+ G + A ++EM
Sbjct: 263 SFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREM 322
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ ++PD Y + + +S A RV +EM G D T++ L + +
Sbjct: 323 RCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCG-CLPDVVTYNTLLNGLCKERR 381
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
AE L E+ R DL + LI Y G L + +++ ++ ++Y
Sbjct: 382 LLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNT 441
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+I + DL A + + S + +++I ++ ++G++E+A + +G
Sbjct: 442 LIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKG 501
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 424
PN T+ Y R+G++ L+K + K P T T + + +E
Sbjct: 502 ILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVN------KVSPDLITYNTLIHGYIKED 555
Query: 425 DVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
+ A L +++K V + LI ++ G
Sbjct: 556 KMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHG 590
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 103/215 (47%), Gaps = 3/215 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP--ETSKNHLTYGSLLN 131
AL+L + M + + + +D + + +D A + + D+ E NH+TY L++
Sbjct: 420 ALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILID 479
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C++ E A L++M + + M +NS++ Y ++G+ K +Q+M + + P
Sbjct: 480 SHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSP 539
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D TYN + + + A +++ M+++ +V D T++ L + + G ++A
Sbjct: 540 DLITYNTLIHGYIKEDKMHDAFKLLNMMEKE-KVQPDVVTYNMLINGFSVHGNVQEAGWI 598
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
+++ + D Y +I + GN E +++
Sbjct: 599 FEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQL 633
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/328 (17%), Positives = 119/328 (36%), Gaps = 77/328 (23%)
Query: 168 YAKTGHP-----------------------------------EKIPAIIQEMKASSIMPD 192
++ G P +K+ A+I EM+ + PD
Sbjct: 131 LSRAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPD 190
Query: 193 SYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERAL 252
T+NV + A D A +++ M G + T++++ +G+++KA
Sbjct: 191 VVTHNVMVDARFRAGDAEAAMALVDSMVSKG-LKPGIVTYNSVLKGLCRSGMWDKAWEVF 249
Query: 253 KELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNL 312
KE+++ D+ ++ LI + + G + E +I++ +R +S+
Sbjct: 250 KEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSF---------- 299
Query: 313 KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
+ +IG +A+ G++++A R G P+ +
Sbjct: 300 -------------------------SCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIY 334
Query: 373 EIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGF 432
+ + R G M A+ ++ + G +P T T + +E+ + AEG
Sbjct: 335 TMVIGGFCRAGLMSDALRVRDEMVGCG------CLPDVVTYNTLLNGLCKERRLLDAEGL 388
Query: 433 LEILKKAVDDLGVEVFEPLIRTYAAAGR 460
L +++ + F LI Y G+
Sbjct: 389 LNEMRERGVPPDLCTFTTLIHGYCIEGK 416
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 53/111 (47%)
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
+ S + +TY +L++ Y KE A LL M++ + + +N L+ ++ G+ ++
Sbjct: 536 KVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEA 595
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAAD 228
I ++M A I PD YTY + + A ++ +EM + G D
Sbjct: 596 GWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDD 646
>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 717
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 158/401 (39%), Gaps = 15/401 (3%)
Query: 62 LKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--T 119
L+ LRD L A + ME+ G+ TV LD K +D A ++ E
Sbjct: 187 LRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGC 246
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
N +TY L+N K+ E+A+ L+E+M L S+ +N L+ + + G +
Sbjct: 247 YPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFD 306
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+++EM P TYN M L ++G +M + + D +F++L Y
Sbjct: 307 LVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLK-SKFTPDIVSFNSLLYGY 365
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNT 297
G +A EL+ R+ + Y LI G L R+ + + + FP+
Sbjct: 366 CRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDI 425
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
+Y ++ L + A F E S D N I K A ++
Sbjct: 426 --FTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQ 483
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 417
E G P+ T+ +F + G+ + A D LE + G +P T + +
Sbjct: 484 EEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDG------LIPDHVTYTSII 537
Query: 418 RHFEQEKDVDGA-EGFLEILKKAVDDLGVEVFEPLIRTYAA 457
F + + A E F E+L K V V + LI +AA
Sbjct: 538 NGFVKNGHLRKAREVFNEMLSKGVAP-SVVTYTVLIHAHAA 577
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 72/167 (43%), Gaps = 1/167 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY ++ C++ E+A LLE M L + + S++ + K GH K + E
Sbjct: 496 ITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNE 555
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + + P TY V + A AA + A +M + V A+ T++ + +
Sbjct: 556 MLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKM-LEKSVPANVITYNAIINGLCMTR 614
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
++A + E+E + + +Y LI G E R++R +
Sbjct: 615 RMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREM 661
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 72/150 (48%), Gaps = 5/150 (3%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELM 138
M +G+ +V + + A Q +D A YF + E S N +TY +++N C
Sbjct: 556 MLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRR 615
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
++A ++M+E + + + L+ G+ E+ + +EM I PDS+T++V
Sbjct: 616 MDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSV 675
Query: 199 WMRALA---AVNDISGAERVIEEMKRDGRV 225
+++ L V+ + E +I+ ++ + V
Sbjct: 676 FLKNLHRDYQVHAVQCVESLIQNVEDNINV 705
>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
Length = 484
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 110/262 (41%), Gaps = 1/262 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TYG+ + CK + A + E+M E L +++ +L+ + K G + EM
Sbjct: 186 TYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEM 245
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ D YN + V D+ A ++EEM++DG + D T++ L + G
Sbjct: 246 ATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDG-LKPDKVTYTTLIDGCCKEGE 304
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+ A +E+ + D Y LI+ + G + RI + A N +Y
Sbjct: 305 LDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTM 364
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+I D+ K KE ++ I NV++ + G+++NA+ L G
Sbjct: 365 VIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIG 424
Query: 365 ADPNAKTWEIFSDYYLRNGDMK 386
PN T+ I D + ++G ++
Sbjct: 425 VCPNDITYNILLDGHCKHGKVR 446
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 99/244 (40%), Gaps = 3/244 (1%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
FN+LM+ K A+ M + I PD YTY +++ L I A + EEM
Sbjct: 152 FNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMC 211
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
G + + + L + + G E+ R DL AY L+ + + ++
Sbjct: 212 ERG-LNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDM 270
Query: 281 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNV 339
I +R ++Y +I +L A + +E + G A D+ T
Sbjct: 271 KAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYT-A 329
Query: 340 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+I +K GR +AE + G P+ T+ + D + +NGD+K L++ + G
Sbjct: 330 LISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKG 389
Query: 400 RGDG 403
+ G
Sbjct: 390 KNPG 393
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/161 (19%), Positives = 74/161 (45%), Gaps = 1/161 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ +TY +L++ CKE + A + ++M + + + + +L++ +K G I+
Sbjct: 288 DKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERIL 347
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EM + + PD+ TY + + A D+ + ++EM+ G+ T++ + + +
Sbjct: 348 CEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPG-IVTYNVVMNGFCS 406
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 282
G + A+ L + N + Y L+ + + G + +
Sbjct: 407 LGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRD 447
>gi|115529197|dbj|BAF34331.1| pentatricopeptide repeat protein [Physcomitrella patens]
Length = 728
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 109/256 (42%), Gaps = 1/256 (0%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y S++ Y K + +KA L+EKM+E +L S+ ++ ++ + G ++ + EMK
Sbjct: 174 YNSMITAYGKACLYDKAARLVEKMREEDLVPDSITYSCMIGACGRVGKLKEALSWFAEMK 233
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
I P S +N + D+ G RVI EMK+ G DW T Y AGL
Sbjct: 234 RLEIKPASSNFNTLISPYGKAKDVEGIVRVITEMKKYG-CKPDWQTLDAAVRAYDRAGLI 292
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
+ L L + + +Y L+ +Y + E RI+ ++R A ++
Sbjct: 293 KDVTEILNLLRDAGWVEETGSYGTLLHVYLKCNLPKEALRIFLAMRKAGMAPKEYMCRSL 352
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
I + + GA+ FKE + T + + MI Y G ++ AE L R
Sbjct: 353 ICTFRDAEMFDGAKSVFKEMQVAGVTPSLESSCTMIYVYGMNGDVKEAEGLFHSLRSSVK 412
Query: 366 DPNAKTWEIFSDYYLR 381
+ + + + Y+R
Sbjct: 413 RLDIFAYNVMINVYMR 428
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 136/327 (41%), Gaps = 20/327 (6%)
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
++AE L ++ +N ++ +Y + PE + + M+ ++PD+YTY+
Sbjct: 397 VKEAEGLFHSLRSSVKRLDIFAYNVMINVYMRCDMPEGAIKVYKLMEEDHLLPDAYTYHS 456
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
+R N + AE + + R+ V D + + + + E+ + +E+ +
Sbjct: 457 MLRMCQKCNLPAQAEEIYWRL-RNSDVELDEVMCNCVLNTCAKFLPLEEMHKLFQEMIDV 515
Query: 259 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLP 316
+ +I LYG+ G + E R ++L+LA F + IS+ ++ +D P
Sbjct: 516 GYVPYNITFNVMIDLYGKAG-MPE--RAHKALKLAQQFGSADKISFSTLVHAYAKKQDFP 572
Query: 317 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 376
E E ++ + N ++ AY K G++E ++ R G + ++ I
Sbjct: 573 NMEAALWEMQNAGYGSSLEAYNSILDAYGKAGQMEKVSDVLARMENSGMRMDLASYNILI 632
Query: 377 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 436
+ Y +N + +E T + +G VP T T +R + D A +
Sbjct: 633 NTYGKN----YMIAEMETLFRTMQEEG--VVPDRWTYNTIIRTYGFADYPDRAVYWF--- 683
Query: 437 KKAVDDLGVE----VFEPLIRTYAAAG 459
KA+ D G+ + L+ T+ AG
Sbjct: 684 -KAMQDAGISPDRVTYMILVSTFERAG 709
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 83/174 (47%), Gaps = 3/174 (1%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + +++ +L++ Y K+ EA L +M+ G S +NS++ Y K G EK+
Sbjct: 552 SADKISFSTLVHAYAKKQDFPNMEAALWEMQNAGYGSSLEAYNSILDAYGKAGQMEKVSD 611
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
++ M+ S + D +YN+ + I+ E + M+ +G V W T++ + Y
Sbjct: 612 VLARMENSGMRMDLASYNILINTYGKNYMIAEMETLFRTMQEEGVVPDRW-TYNTIIRTY 670
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 293
A ++A K +++ D Y L++ + + GN+ E R W LR++
Sbjct: 671 GFADYPDRAVYWFKAMQDAGISPDRVTYMILVSTFERAGNIDEAAR-W-CLRMS 722
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 80/166 (48%), Gaps = 8/166 (4%)
Query: 129 LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE---KIPAIIQEMK 185
+LN K L E+ L ++M ++ ++ FN ++ LY K G PE K + Q+
Sbjct: 492 VLNTCAKFLPLEEMHKLFQEMIDVGYVPYNITFNVMIDLYGKAGMPERAHKALKLAQQFG 551
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
++ D +++ + A A D E + EM+ G + ++++ Y +AG
Sbjct: 552 SA----DKISFSTLVHAYAKKQDFPNMEAALWEMQNAG-YGSSLEAYNSILDAYGKAGQM 606
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 291
EK L +EN DL++Y LI YG+ ++E+ ++R+++
Sbjct: 607 EKVSDVLARMENSGMRMDLASYNILINTYGKNYMIAEMETLFRTMQ 652
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 90/436 (20%), Positives = 163/436 (37%), Gaps = 82/436 (18%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ +TY ++ + ++A + +MK L + +S FN+L++ Y K E I +I
Sbjct: 205 DSITYSCMIGACGRVGKLKEALSWFAEMKRLEIKPASSNFNTLISPYGKAKDVEGIVRVI 264
Query: 182 QEMKASSIMPDSYTYNVWMRAL---AAVNDISG--------------------------- 211
EMK PD T + +RA + D++
Sbjct: 265 TEMKKYGCKPDWQTLDAAVRAYDRAGLIKDVTEILNLLRDAGWVEETGSYGTLLHVYLKC 324
Query: 212 -----AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSA 266
A R+ M++ G ++ S L + +A +F+ A+ KE++ L +
Sbjct: 325 NLPKEALRIFLAMRKAGMAPKEYMCRS-LICTFRDAEMFDGAKSVFKEMQVAGVTPSLES 383
Query: 267 YQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP-GAEKCFKEW 325
+I +YG G++ E ++ SLR + +Y MI V + D+P GA K +K
Sbjct: 384 SCTMIYVYGMNGDVKEAEGLFHSLRSSVKRLDIFAYNVMINVYMRC-DMPEGAIKVYKLM 442
Query: 326 E-----SGCATY------------------------------DIRVTNVMIGAYAKEGRL 350
E TY D + N ++ AK L
Sbjct: 443 EEDHLLPDAYTYHSMLRMCQKCNLPAQAEEIYWRLRNSDVELDEVMCNCVLNTCAKFLPL 502
Query: 351 ENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSS 410
E +L + G P T+ + D Y + G + A L+ A G D
Sbjct: 503 EEMHKLFQEMIDVGYVPYNITFNVMIDLYGKAGMPERAHKALKLAQQFGSAD-------K 555
Query: 411 ETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPV--MLRR 468
+ T + + +++D E L ++ A +E + ++ Y AG+ V +L R
Sbjct: 556 ISFSTLVHAYAKKQDFPNMEAALWEMQNAGYGSSLEAYNSILDAYGKAGQMEKVSDVLAR 615
Query: 469 LKMEKVEVSEASKKLL 484
++ + + AS +L
Sbjct: 616 MENSGMRMDLASYNIL 631
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 43/99 (43%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
+Y L+N Y K M + E L M+E + +N+++ Y +P++ + M
Sbjct: 627 SYNILINTYGKNYMIAEMETLFRTMQEEGVVPDRWTYNTIIRTYGFADYPDRAVYWFKAM 686
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
+ + I PD TY + + +I A R M + G
Sbjct: 687 QDAGISPDRVTYMILVSTFERAGNIDEAARWCLRMSQAG 725
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 122/272 (44%), Gaps = 5/272 (1%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TYG ++N CK T+ A LL KM++ L + +N+++ K H + + +E
Sbjct: 17 VTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE 76
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ I P+ TY+ + L S A R++ +M + ++ D TFS L +V+ G
Sbjct: 77 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI-ERKINPDVFTFSALIDAFVKEG 135
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANIS 301
+AE+ E+ R+ + Y LI + L E +++ + + FP+ ++
Sbjct: 136 KLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDV--VT 193
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I+ K + + F+E + N++I + G + A+E+ +
Sbjct: 194 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 253
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
G PN T+ D +NG ++ A+ E
Sbjct: 254 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFE 285
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 134/306 (43%), Gaps = 3/306 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNH--LTYGSLLN 131
A +L +M +R +N V + +D K + AE + ++ + S + +TY SL+N
Sbjct: 105 ASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN 164
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C ++A+ + E M + + +N+L+ + K E+ + +EM ++
Sbjct: 165 GFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 224
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
++ TYN+ ++ L D A+ + +EM DG V + T++ L + G EKA
Sbjct: 225 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG-VPPNIMTYNTLLDGLCKNGKLEKAMVV 283
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
+ L+ + Y +I + G + + + ++ +L L ++Y MI
Sbjct: 284 FEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCR 343
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
A+ FKE + + N +I A ++G E + EL + R G +A T
Sbjct: 344 KGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 403
Query: 372 WEIFSD 377
+ ++
Sbjct: 404 IGLVTN 409
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/313 (20%), Positives = 127/313 (40%), Gaps = 3/313 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNH--LTYGSLLN 131
AL L + ME +G+ V + + + A D+ E N T+ +L++
Sbjct: 70 ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALID 129
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ KE +AE L ++M + ++ S + ++SL+ + ++ + + M + P
Sbjct: 130 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 189
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D TYN ++ + V EM + G V + T++ L +AG + A+
Sbjct: 190 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG-NTVTYNILIQGLFQAGDCDMAQEI 248
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
KE+ + ++ Y L+ + G L + ++ L+ + +Y MI+ +
Sbjct: 249 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 308
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+ F D+ N MI + ++G E A+ L + + G PN+
Sbjct: 309 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC 368
Query: 372 WEIFSDYYLRNGD 384
+ LR+GD
Sbjct: 369 YNTLIRARLRDGD 381
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 130/277 (46%), Gaps = 1/277 (0%)
Query: 114 VDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGH 173
++L S + ++ L++C+C+ A ++L KM +L S + F SL+ +
Sbjct: 97 MELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNR 156
Query: 174 PEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFS 233
+++ M S P+ YN + L +++ A ++ EM++ G + AD T++
Sbjct: 157 IGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKG-LGADVVTYN 215
Query: 234 NLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 293
L + +G + A R L+++ R+ + D+ + LI ++ + GNL E +++ + +
Sbjct: 216 TLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS 275
Query: 294 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
+ N++Y ++I L L A+K F S ++ N +I + K ++
Sbjct: 276 SVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEG 335
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
+L +R G + + T+ Y + G +++A+D
Sbjct: 336 MKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALD 372
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/361 (21%), Positives = 151/361 (41%), Gaps = 13/361 (3%)
Query: 97 LDLVAKVQGIDAAENYFVDLPETSKNH--LTYGSLLNCYCKELMTEKAEALLEKMKELNL 154
L ++AK+ D + + +H ++ L++C+C+ A ALL KM +L
Sbjct: 611 LTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGF 670
Query: 155 GFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAER 214
S + SL+ + + ++ +++ M +P+ YN + L D++ A
Sbjct: 671 RPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALE 730
Query: 215 VIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLY 274
V M++ G + AD T++ L S +G + A R L+++ R ++ + LI +
Sbjct: 731 VFYCMEKKG-IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTF 789
Query: 275 GQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY 332
+ GNL E +++ + R PN +Y ++I L A+ F S
Sbjct: 790 VKEGNLLEARNLYKEMIRRSVVPNV--FTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFP 847
Query: 333 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 392
D+ N +I + K R+E+ +L +G +A T+ Y + G + +A
Sbjct: 848 DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 907
Query: 393 EKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLI 452
+ +D G P T + ++ A +E L+K+ D+ + + +I
Sbjct: 908 NRMVDCGVS------PDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIII 961
Query: 453 R 453
+
Sbjct: 962 Q 962
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 103/239 (43%), Gaps = 3/239 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
A +L +M KR ++ V +D K + A N + ++ S N TY SL+N
Sbjct: 763 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 822
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C A+ + + M + +N+L+T + K+ E + EM ++
Sbjct: 823 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 882
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D++TYN + ++ A++V M D V+ D T++ L G EKA
Sbjct: 883 DAFTYNTLIHGYCQAGKLNVAQKVFNRMV-DCGVSPDIVTYNILLDCLCNNGKIEKALVM 941
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
+++L+ D+ Y +I +T L E + ++RSL I+Y+ MI L
Sbjct: 942 VEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLC 1000
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 112/262 (42%), Gaps = 5/262 (1%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +LL C A +L M + ++ + F +L+ ++ K G+ ++ + +E
Sbjct: 212 VTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKE 271
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M SS+ P++ TYN + L + A++ + M G + T++ L S + +
Sbjct: 272 MIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKG-CFPNVVTYNTLISGFCKFR 330
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI--WRSLRLAFPNTANIS 301
+ ++ + + + + D+ Y LI Y Q G L I W R P+ I+
Sbjct: 331 MVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDI--IT 388
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
+ ++ L ++ A F + I N+MI K ++E A EL R
Sbjct: 389 HCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLP 448
Query: 362 RRGADPNAKTWEIFSDYYLRNG 383
G P+A+T+ I +NG
Sbjct: 449 VEGVKPDARTYTIMILGLCKNG 470
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/317 (18%), Positives = 129/317 (40%), Gaps = 3/317 (0%)
Query: 58 VGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP 117
+G L + A+ L ++M+ G V ++ + K + ++ A F +
Sbjct: 677 LGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCME 736
Query: 118 ETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
+ + +TY +L++ A LL M + + + + F +L+ + K G+
Sbjct: 737 KKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLL 796
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
+ + +EM S++P+ +TYN + + A+ + + M G D T++ L
Sbjct: 797 EARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG-CFPDVVTYNTL 855
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
+ + ++ E + E+ + D Y LI Y Q G L+ +++ +
Sbjct: 856 ITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGV 915
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEE 355
+ ++Y ++ L N + A ++ + DI N++I + +L+ A
Sbjct: 916 SPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWC 975
Query: 356 LKERARRRGADPNAKTW 372
L R+G P+A +
Sbjct: 976 LFRSLTRKGVKPDAIAY 992
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/305 (19%), Positives = 117/305 (38%), Gaps = 46/305 (15%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMP----FNSLMTLYAKTGHPEKIPA 179
+T GSLLN +C+ ++A +L++ M GF +P +N+++ K
Sbjct: 675 VTLGSLLNGFCQGNRFQEAVSLVDSMD----GFGFVPNVVIYNTVINGLCKNRDLNNALE 730
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+ M+ I D+ TYN + L+ + A R++ +M + ++ + F+ L +
Sbjct: 731 VFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKR-KIDPNVIFFTALIDTF 789
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLI---TLYGQTGNLSEVYRIWRSLRLAFPN 296
V+ G +A KE+ R+ ++ Y LI ++G G+ ++ + S + FP+
Sbjct: 790 VKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVS-KGCFPD 848
Query: 297 TAN---------------------------------ISYLNMIQVLVNLKDLPGAEKCFK 323
+Y +I L A+K F
Sbjct: 849 VVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFN 908
Query: 324 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
+ DI N+++ G++E A + E ++ D + T+ I R
Sbjct: 909 RMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTD 968
Query: 384 DMKLA 388
+K A
Sbjct: 969 KLKEA 973
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 58/286 (20%), Positives = 106/286 (37%), Gaps = 38/286 (13%)
Query: 140 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 199
E A AL +M S + F L+T A E + Q+M+ I D Y++ +
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112
Query: 200 MRALAAVNDISGAERVIEEMKRDG-------------------RVAADWT---------- 230
+ + +S A V+ +M + G R+ ++
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172
Query: 231 -----TFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 285
++ L + G A L E+E + D+ Y L+T +G S+ R
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 286 IWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 345
+ R + N +++ +I V V +L A++ +KE + N +I
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Query: 346 KEGRLENAEELKERARRRGADPNAKTWEI----FSDYYLRNGDMKL 387
GRL +A++ + +G PN T+ F + + + MKL
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKL 338
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/133 (20%), Positives = 61/133 (45%), Gaps = 1/133 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
TY +L++ YC+ A+ + +M + + + +N L+ G EK ++++
Sbjct: 885 FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVED 944
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
++ S + D TYN+ ++ L + + A + + R G V D + + S G
Sbjct: 945 LQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKG-VKPDAIAYITMISGLCRKG 1003
Query: 244 LFEKAERALKELE 256
L +A++ + ++
Sbjct: 1004 LQREADKLCRRMK 1016
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 69/168 (41%), Gaps = 1/168 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +L+ +CK E L +M L + +N+L+ Y + G +
Sbjct: 850 VTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 909
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + PD TYN+ + L I A ++E++++ + D T++ +
Sbjct: 910 MVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKS-EMDVDIITYNIIIQGLCRTD 968
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 291
++A + L + D AY +I+ + G E ++ R ++
Sbjct: 969 KLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMK 1016
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 125/295 (42%), Gaps = 36/295 (12%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TYG+++N CK + A +LL+KM++ + + +N+++ K H + A+ +
Sbjct: 221 VTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNK 280
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ I PD +TYN + L S A R++ M + ++ + TFS L +V+ G
Sbjct: 281 METKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMI-ERKINPNVVTFSALIDAFVKEG 339
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTA--- 298
+AE+ E+ R+ D+ Y LI + L E ++ + + FPN
Sbjct: 340 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 399
Query: 299 ------------------------------NISYLNMIQVLVNLKDLPGAEKCFKEWESG 328
++Y +IQ L D A+K FK+ S
Sbjct: 400 TLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD 459
Query: 329 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
DI ++++ K G+LE A + E ++ +P+ T+ I + + G
Sbjct: 460 GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 514
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 141/336 (41%), Gaps = 20/336 (5%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLM-TLYAKTGHPEKIPAIIQ 182
+T SLLN YC A AL+++M E+ ++ FN+L+ L+ E + A++
Sbjct: 151 VTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAV-ALVD 209
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
+M PD TY + L DI A ++++M++ G++ AD ++ + +
Sbjct: 210 QMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEK-GKIEADVVIYNTIIDGLCKY 268
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANI 300
+ A ++E + D+ Y LI+ G S+ R+ ++ R PN
Sbjct: 269 KHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTF 328
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
S L I V L AEK + E DI + +I + RL+ A+ + E
Sbjct: 329 SAL--IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 386
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 420
+ PN T+ + + ++ ++ + G V ++ T T ++
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRG------LVGNTVTYNTLIQGL 440
Query: 421 EQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYA 456
Q D D A+ +I KK V D GV P I TY+
Sbjct: 441 FQAGDCDMAQ---KIFKKMVSD-GV---PPDIITYS 469
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 133/317 (41%), Gaps = 8/317 (2%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
+Y L+NC+C+ A A+L KM +L + +SL+ Y + A++ +M
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 176
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
PD+ T+N + L N S A ++++M + G D T+ + + + G
Sbjct: 177 VEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRG-CQPDLVTYGAVVNGLCKRGD 235
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+ A LK++E D+ Y +I + ++ + + ++ + +Y +
Sbjct: 236 IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNS 295
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+I L N A + ++ + +I A+ KEG+L AE+L + +R
Sbjct: 296 LISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 355
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 424
DP+ T+ + + + + A E I P+ T T ++ F + K
Sbjct: 356 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK------DCFPNVVTYNTLIKGFCKAK 409
Query: 425 DV-DGAEGFLEILKKAV 440
V +G E F E+ ++ +
Sbjct: 410 RVEEGMELFREMSQRGL 426
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/282 (19%), Positives = 121/282 (42%), Gaps = 8/282 (2%)
Query: 76 KLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL--PETSKNHLTYGSLLNCY 133
KL + M KR ++ + + ++ +D A++ F + + N +TY +L+ +
Sbjct: 346 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 405
Query: 134 CKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDS 193
CK E+ L +M + L +++ +N+L+ + G + I ++M + + PD
Sbjct: 406 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDI 465
Query: 194 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 253
TY++ + L + A V E +++ ++ D T++ + +AG E
Sbjct: 466 ITYSILLDGLCKYGKLEKALVVFEYLQK-SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 524
Query: 254 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR--LAFPNTANISYLNMIQVLVN 311
L + ++ Y +I+ + + G E ++R ++ P++ Y +I+ +
Sbjct: 525 SLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSG--CYNTLIRARLR 582
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
D + + KE S C T M+ +GRLE +
Sbjct: 583 DGDKAASAELIKEMRS-CGFVGDASTISMVINMLHDGRLEKS 623
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 67/344 (19%), Positives = 126/344 (36%), Gaps = 50/344 (14%)
Query: 157 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
S + FN L++ AK + + ++ + M+ I D Y+YN+ + + + A V+
Sbjct: 79 SIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVL 138
Query: 217 EEMKRDGRVAADWTTFSNLASIYVEA------------------------------GLF- 245
+M + G D T S+L + Y + GLF
Sbjct: 139 GKMMKLG-YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFL 197
Query: 246 -EKAERA---LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
KA A + ++ R DL Y ++ + G++ + + + +
Sbjct: 198 HNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I L K + A F + E+ D+ N +I GR +A L
Sbjct: 258 YNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMI 317
Query: 362 RRGADPNAKTWEIFSDYYLRNGDM----KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 417
R +PN T+ D +++ G + KL + ++++ID P T + +
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID----------PDIFTYSSLI 367
Query: 418 RHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 461
F +D A+ E++ V + LI+ + A R
Sbjct: 368 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 411
>gi|147797621|emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
Length = 912
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/357 (20%), Positives = 156/357 (43%), Gaps = 16/357 (4%)
Query: 101 AKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMP 160
K+ I+ A+N F ++ N +TY +++N +CK+ + E A ++++M E MP
Sbjct: 264 CKMGMIENAKNVFDEM-GCKPNLVTYNTMINGFCKKGLMESAMKIVDQMTETE---DCMP 319
Query: 161 ----FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
+ +L+ Y K G E+ ++EM + + P+ TYN + L ++ A+R++
Sbjct: 320 DTVTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMM 379
Query: 217 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 276
M+ +G + + T +++ G + A R LKE+ D AY ++ Y +
Sbjct: 380 TRMRLNG-LKDNVATHTSILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCK 438
Query: 277 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES-GCATYDIR 335
G + + + ++ N + S+ + ++LV A ++ + GC +
Sbjct: 439 IGKADDAISLLKEMKSRGINPSVSSFNAVFRILVESGKTDKAGLILRQMKQLGCTPNFLS 498
Query: 336 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 395
+ V+ G +GR+ EE + R G +A + Y +G+ +A+ +
Sbjct: 499 YSTVIDGLCKAKGRMHEVEEFVDDMCRNGHHLDASMYSWLVKGYCEDGNADMAMRLFCEM 558
Query: 396 IDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLI 452
+D G +V + E+ F++ ++ E F E + + + + + ++
Sbjct: 559 LDMG------YVINLESFLAFVKGLSAKEKAFEVEKFFEEMSRRCPGIDIHKYRRIL 609
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 112/256 (43%), Gaps = 4/256 (1%)
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEALLEKM-KELNLGFSSMPFNSLMTLYAKTGHPEK 176
E+ + +Y ++L + K A A+ +++ KE + + +++ Y K G E
Sbjct: 212 ESGRCLFSYNAILGVFVKANRIMLARAVFDQIVKEGVVKPDVSTYTTIIRGYCKMGMIEN 271
Query: 177 IPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLA 236
+ EM P+ TYN + + A +++++M D T++ L
Sbjct: 272 AKNVFDEMGCK---PNLVTYNTMINGFCKKGLMESAMKIVDQMTETEDCMPDTVTYTTLI 328
Query: 237 SIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPN 296
Y + G E+A + ++E+ +RN ++ Y +I GN+ E R+ +RL
Sbjct: 329 DGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLK 388
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
++ ++++ L + L A + KE D + V++ Y K G+ ++A L
Sbjct: 389 DNVATHTSILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISL 448
Query: 357 KERARRRGADPNAKTW 372
+ + RG +P+ ++
Sbjct: 449 LKEMKSRGINPSVSSF 464
>gi|255661208|gb|ACU25773.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 426
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 121/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 6 SPDRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 65
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K + I PD YN + A +I EM+ G V D ++S L ++Y
Sbjct: 66 IFSRLKRAGIKPDLVAYNSMINVFGKAKLFREARSLISEMREAG-VVPDTVSYSTLLTMY 124
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ E +++ S+R
Sbjct: 125 VENQKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGIEPNV 184
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMMMIYGKTLEHEKANNLIQE 244
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
RG +PNA T+ + + G + A +K +G
Sbjct: 245 MHNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSG 284
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 94/184 (51%), Gaps = 6/184 (3%)
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
+ +N +TY +++ Y K L EKA L+++M + +++ ++++++++ K G ++
Sbjct: 214 DIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHNRGIEPNAITYSTIISIWGKVGKLDRA 273
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
+ Q++++S + D Y + A ++ A+R++ E+KR + D T LA
Sbjct: 274 AMLFQKLRSSGVEIDHVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD-TAIHILAG 332
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR-LAFPN 296
AG E+A ++ + +D++ ++ +I L+ + V ++ +R L + +
Sbjct: 333 ----AGRIEEATWVFRQAIDAGEVKDITVFERMIDLFSKYKKYPNVVEVFEKMRGLGYFS 388
Query: 297 TANI 300
+N+
Sbjct: 389 DSNV 392
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 83/200 (41%), Gaps = 4/200 (2%)
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
++ PD YTY+ + A +++M++D RV D +SNL + + + K
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEQD-RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 307
A L+ DL AY +I ++G+ E + +R A +SY ++
Sbjct: 63 AISIFSRLKRAGIKPDLVAYNSMINVFGKAKLFREARSLISEMREAGVVPDTVSYSTLLT 122
Query: 308 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
+ V + A F E D+ N+MI Y + + A++L R+ G +P
Sbjct: 123 MYVENQKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGIEP 182
Query: 368 NAKTWEIFSDYYLRNGDMKL 387
N ++ Y GD +L
Sbjct: 183 NVVSYNTLLRVY---GDAEL 199
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/314 (19%), Positives = 127/314 (40%), Gaps = 15/314 (4%)
Query: 116 LPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
+P+T ++Y +LL Y + +A ++ +M+E+ N ++ +Y + +
Sbjct: 111 VPDT----VSYSTLLTMYVENQKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAK 166
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
+ + M+ I P+ +YN +R A + M+R + + T++ +
Sbjct: 167 EADKLFWSMRKVGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKD-IEQNVVTYNTM 225
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
IY + EKA ++E+ NR + Y +I+++G+ G L +++ LR +
Sbjct: 226 MMIYGKTLEHEKANNLIQEMHNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGV 285
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEE 355
++ Y MI + A++ E + +++ GA GR+E A
Sbjct: 286 EIDHVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGA----GRIEEATW 341
Query: 356 LKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRT 415
+ +A G + +E D + + V+ EK RG G + S I
Sbjct: 342 VFRQAIDAGEVKDITVFERMIDLFSKYKKYPNVVEVFEKM----RGLG--YFSDSNVISL 395
Query: 416 FMRHFEQEKDVDGA 429
+ + + + D A
Sbjct: 396 VLNAYGKLHEFDKA 409
>gi|410110067|gb|AFV61113.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
herrerae]
Length = 433
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 122/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 9 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 68
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S MPD YN + A +I EMK G V + ++S L ++Y
Sbjct: 69 IFSRLKRSGFMPDLVAYNAMINVFGKAKLFREARALISEMKTAG-VMPNTASYSTLLTMY 127
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ +R
Sbjct: 128 VENKKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 187
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 188 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 247
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 248 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 287
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 8/207 (3%)
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
EM+ ++ PD YTY+ + A +++M++D RV D +SNL + +
Sbjct: 2 EMRERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIELSRKL 60
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANI 300
+ KA L+ DL AY +I ++G+ E + ++ A PNTA
Sbjct: 61 CDYSKAISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFREARALISEMKTAGVMPNTA-- 118
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
SY ++ + V K A F E D+ N+MI Y + G + A++L
Sbjct: 119 SYSTLLTMYVENKKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM 178
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKL 387
R+ G +PN ++ Y GD +L
Sbjct: 179 RKMGIEPNVVSYNTLLRVY---GDAEL 202
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 110/221 (49%), Gaps = 20/221 (9%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 220 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML 279
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S + D Y + A ++ A+R++ E+K + D T LA
Sbjct: 280 FQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKSPDNIPRD-TAIHILAG--- 335
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + +D++ ++ +I L Y + N+ EV+ R L FP++
Sbjct: 336 -AGRIEEATYVFRQAIDAGEVKDITVFERMIHLFSKYKKYANVVEVFDKMRGLGY-FPDS 393
Query: 298 ANISYLNMIQVLVN----LKDLPGAEKCFKEW-ESGCATYD 333
N+I +++N L +L A + E E GC D
Sbjct: 394 ------NVIALVLNAYGKLHELDKANDVYMEMQEVGCIFSD 428
>gi|302822814|ref|XP_002993063.1| hypothetical protein SELMODRAFT_431180 [Selaginella moellendorffii]
gi|300139155|gb|EFJ05902.1| hypothetical protein SELMODRAFT_431180 [Selaginella moellendorffii]
Length = 570
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 147/341 (43%), Gaps = 19/341 (5%)
Query: 59 GDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGID-AAENYFVDLP 117
G K LR+ K Y P K++ M + + + A + G D AAEN F +LP
Sbjct: 135 GVLFKLLRNEK-YKPGWKVANYMIRSEKFELGELDYMFQIAFAALAGCDRAAENMFANLP 193
Query: 118 ETSKNH-----LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTG 172
K L GS + +M E L +++K + + N +M +
Sbjct: 194 RVYKRKKALLVLMAGSSPQRENRVVM----ERLFKELKHRSWYTEASALNQMMLFSLQPD 249
Query: 173 HPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTF 232
++IP + +E K+ + PD +YN+++ + SG E V + ++ D D +T
Sbjct: 250 LRKRIPDLFEEAKSLGVAPDVSSYNLYLGFHCKEKNASGLEEVYQMLQEDPNARPDESTL 309
Query: 233 SNLASIYVEAGLFEKAERALKELE----NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWR 288
LA Y+ G F+KA +AL ELE + R + Y L+ LYG T + V IW
Sbjct: 310 LILACGYISVGCFDKAGKALVELEEGLDSGLFRRKQATYNKLLRLYGDTKDKEGVESIW- 368
Query: 289 SLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEG 348
S+ + P A SY I + + AE+ F + + T + M+ YA G
Sbjct: 369 SILSSRPLKAVDSYSYAIAAFGKAEGVHKAEEIFAKVDGLLETNQV---IAMLSVYAHYG 425
Query: 349 RLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 389
+ A EL ++ R+ ++ YLR G++K A+
Sbjct: 426 YADKARELFQKLPRKRMKHRLVVYKYLIAGYLREGEVKKAL 466
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 88/220 (40%), Gaps = 16/220 (7%)
Query: 77 LSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKE 136
L E + G+ VS ++L K + E + L E +LL C
Sbjct: 257 LFEEAKSLGVAPDVSSYNLYLGFHCKEKNASGLEEVYQMLQEDPNARPDESTLLILACGY 316
Query: 137 L----MTEKAEALLEKMKELNLGF---SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
+ + +AL+E + L+ G +N L+ LY T E + +I + + +
Sbjct: 317 ISVGCFDKAGKALVELEEGLDSGLFRRKQATYNKLLRLYGDTKDKEGVESIWSILSSRPL 376
Query: 190 MP-DSYTYNVWMRALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYVEAGLFEK 247
DSY+Y A+AA G + E K DG + + + S+Y G +K
Sbjct: 377 KAVDSYSY-----AIAAFGKAEGVHKAEEIFAKVDGLLETNQVI--AMLSVYAHYGYADK 429
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW 287
A ++L + L Y++LI Y + G + + +++
Sbjct: 430 ARELFQKLPRKRMKHRLVVYKYLIAGYLREGEVKKALQVF 469
>gi|255661150|gb|ACU25744.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
gi|255661152|gb|ACU25745.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 426
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 121/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 6 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 65
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S PD YN + A +I EMK G V D ++S L ++Y
Sbjct: 66 IFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAG-VTPDTASYSTLLTMY 124
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ +R
Sbjct: 125 VENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 245 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 284
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 109/221 (49%), Gaps = 20/221 (9%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML 276
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S + D Y + A ++ A+R++ E+KR + D I
Sbjct: 277 FQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAI-----HILA 331
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + +D++ ++ +I L Y + GN+ EV+ R L FP++
Sbjct: 332 GAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGY-FPDS 390
Query: 298 ANISYLNMIQVLVN----LKDLPGAEKCFKEW-ESGCATYD 333
N+I +++N L + A + E E GC D
Sbjct: 391 ------NVIALVLNAYGKLHEFDKANDVYMEMQEVGCVFSD 425
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 87/202 (43%), Gaps = 8/202 (3%)
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
++ PD YTY+ + A +++M++D RV D +SNL + + + K
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNM 305
A L+ DL AY +I ++G+ E + ++ A P+TA SY +
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVTPDTA--SYSTL 120
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
+ + V K A F E D+ N+MI Y + G + A++L R+ G
Sbjct: 121 LTMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180
Query: 366 DPNAKTWEIFSDYYLRNGDMKL 387
+PN ++ Y GD +L
Sbjct: 181 EPNVVSYNTLLRVY---GDAEL 199
>gi|255661144|gb|ACU25741.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 426
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 122/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 6 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 65
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S MPD YN + A +I EM+ G V + ++S L ++Y
Sbjct: 66 IFSRLKRSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAG-VTPNTASYSTLLTMY 124
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ +R
Sbjct: 125 VENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 245 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 284
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 109/221 (49%), Gaps = 20/221 (9%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML 276
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S + D Y + A ++ A+R++ E+KR + D I
Sbjct: 277 FQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAI-----HILA 331
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + +D++ ++ +I L Y + GN+ EV+ R L FP++
Sbjct: 332 GAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGY-FPDS 390
Query: 298 ANISYLNMIQVLVN----LKDLPGAEKCFKEW-ESGCATYD 333
N+I +++N L + A + E E GC D
Sbjct: 391 ------NVIALILNAYGKLHEFDKANDVYMEMQEVGCVFSD 425
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 8/202 (3%)
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
++ PD YTY+ + A +++M++D RV D +SNL + + + K
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNM 305
A L+ DL AY +I ++G+ E + +R A PNTA SY +
Sbjct: 63 AISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTA--SYSTL 120
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
+ + V K A F E D+ N+MI Y + G + A++L R+ G
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180
Query: 366 DPNAKTWEIFSDYYLRNGDMKL 387
+PN ++ Y GD +L
Sbjct: 181 EPNVVSYNTLLRVY---GDAEL 199
>gi|10177016|dbj|BAB10204.1| maize crp1 protein-like [Arabidopsis thaliana]
Length = 680
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 127/279 (45%), Gaps = 9/279 (3%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
T S+++ T +AEAL E++++ + + +N+L+ Y KTG + +++ EM
Sbjct: 277 TLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEM 336
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ + PD +TY++ + A A V++EM+ G V + FS L + + + G
Sbjct: 337 EKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEA-GDVQPNSFVFSRLLAGFRDRGE 395
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
++K + LKE+++ D Y +I +G+ L + + +++
Sbjct: 396 WQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNT 455
Query: 305 MIQVLVNLKDLPGAEKCFKEWES----GCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
+I AE+ F+ E CAT N+MI +Y + R ++ + L +
Sbjct: 456 LIDCHCKHGRHIVAEEMFEAMERRGCLPCAT----TYNIMINSYGDQERWDDMKRLLGKM 511
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ +G PN T D Y ++G A++CLE+ G
Sbjct: 512 KSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVG 550
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 136/320 (42%), Gaps = 9/320 (2%)
Query: 141 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 200
KA LL + L + S+++ A +G + A+ +E++ S I P + YN +
Sbjct: 258 KALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALL 317
Query: 201 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 260
+ + AE ++ EM++ G V+ D T+S L YV AG +E A LKE+E +
Sbjct: 318 KGYVKTGPLKDAESMVSEMEKRG-VSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDV 376
Query: 261 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 320
+ + L+ + G + +++ + ++ Y +I L A
Sbjct: 377 QPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMT 436
Query: 321 CFKEWESGCATYDIRVT-NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 379
F S D RVT N +I + K GR AEE+ E RRG P A T+ I + Y
Sbjct: 437 TFDRMLSEGIEPD-RVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSY 495
Query: 380 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 439
GD + D +++ + + G +P+ T T + + + + A LE +K
Sbjct: 496 ---GDQE-RWDDMKRLLGKMKSQG--ILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSV 549
Query: 440 VDDLGVEVFEPLIRTYAAAG 459
++ LI YA G
Sbjct: 550 GLKPSSTMYNALINAYAQRG 569
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 102/237 (43%), Gaps = 5/237 (2%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
S + TY L++ Y E A +L++M+ ++ +S F+ L+ + G +K
Sbjct: 341 VSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTF 400
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+++EMK+ + PD YNV + N + A + M +G + D T++ L
Sbjct: 401 QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEG-IEPDRVTWNTLIDC 459
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPN 296
+ + G AE + +E R + Y +I YG ++ R+ ++ PN
Sbjct: 460 HCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPN 519
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
+++ ++ V A +C +E +S + N +I AYA+ G E A
Sbjct: 520 V--VTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQA 574
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 145/386 (37%), Gaps = 68/386 (17%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKE---------LNLGFSSMP----FNSLMTL--- 167
LTY +L+ + EKA L+ KM++ +L S+ +S+M L
Sbjct: 169 LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLY 228
Query: 168 ---------------------YAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV 206
+AK+G P K ++ +A+ + + T + ALA
Sbjct: 229 KEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADS 288
Query: 207 NDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSA 266
AE + EE+++ G + ++ L YV+ G + AE + E+E R D
Sbjct: 289 GRTLEAEALFEELRQSG-IKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHT 347
Query: 267 YQFLITLYGQTGNLSEVYRIWRSLRLAF---------PNTANISYLNMIQVLVNLKDLPG 317
Y LI Y G W S R+ PN+ S ++L +D
Sbjct: 348 YSLLIDAYVNAGR-------WESARIVLKEMEAGDVQPNSFVFS-----RLLAGFRDRGE 395
Query: 318 AEKCF---KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 374
+K F KE +S D + NV+I + K L++A +R G +P+ TW
Sbjct: 396 WQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNT 455
Query: 375 FSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 434
D + ++G +A + E G +P + T + + ++ D + L
Sbjct: 456 LIDCHCKHGRHIVAEEMFEAMERRG------CLPCATTYNIMINSYGDQERWDDMKRLLG 509
Query: 435 ILKKAVDDLGVEVFEPLIRTYAAAGR 460
+K V L+ Y +GR
Sbjct: 510 KMKSQGILPNVVTHTTLVDVYGKSGR 535
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 105/244 (43%), Gaps = 7/244 (2%)
Query: 142 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 201
A A++ +++ NL FS S+ L G EK+ + ++ P TYN +
Sbjct: 121 AYAVVSWLQKHNLCFSYELLYSI--LIHALGRSEKLYEAFLLSQKQTLTP--LTYNALIG 176
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE--RALKELENRN 259
A A NDI A +I +M++DG +D+ +S + + + R KE+E
Sbjct: 177 ACARNNDIEKALNLIAKMRQDG-YQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDK 235
Query: 260 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 319
D+ +I + ++G+ S+ ++ + + + +++I L + AE
Sbjct: 236 LELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAE 295
Query: 320 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 379
F+E R N ++ Y K G L++AE + +RG P+ T+ + D Y
Sbjct: 296 ALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAY 355
Query: 380 LRNG 383
+ G
Sbjct: 356 VNAG 359
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y +L+N Y + ++E+A M L S + NSL+ + + + A++Q MK
Sbjct: 558 YNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMK 617
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
+ + PD TY M+AL V+ V EEM G
Sbjct: 618 ENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSG 655
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +T+ +L++ Y K A LE+MK + L SS +N+L+ YA+ G E+
Sbjct: 519 NVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAF 578
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+ M + + P N + A + A V++ MK +G V D T++ L +
Sbjct: 579 RVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENG-VKPDVVTYTTLMKALIR 637
Query: 242 AGLFEKAERALKEL 255
F+K +E+
Sbjct: 638 VDKFQKVPVVYEEM 651
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 158/362 (43%), Gaps = 9/362 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP--ETSKNHLTYGSLLN 131
A+KL ++ R V + +D + K Q + A F ++ S + +TY +L+
Sbjct: 183 AIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIY 242
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C E ++A LL +M + + +N L+ K G ++ +++ M + + P
Sbjct: 243 GFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKP 302
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D TY+ M V ++ A+ V M G V D T++ L + + + + ++A
Sbjct: 303 DVITYSTLMDGYFLVYEVKKAQHVFNAMSLMG-VTPDVHTYTILINGFCKNKMVDEALNL 361
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
KE+ +N + Y LI ++G + V+ + +R I+Y ++I L
Sbjct: 362 FKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCK 421
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
L A F + + +I +++ K GRL++A+E+ + +G N T
Sbjct: 422 NGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYT 481
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG 431
+ + + + + G ++ A+ L K D G +P++ T T + ++ + D AE
Sbjct: 482 YNVMINGHCKQGLLEEALTMLSKMEDNG------CIPNAFTFETIIIALFKKDENDKAEK 535
Query: 432 FL 433
L
Sbjct: 536 LL 537
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/365 (17%), Positives = 140/365 (38%), Gaps = 11/365 (3%)
Query: 42 QLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVA 101
Q N+ L + + L K Y A+ LS +E +G+ + I ++
Sbjct: 46 QFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFC 105
Query: 102 KVQGIDAAENYFVDL------PETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLG 155
+ I + + P+T +T +L+ C + +KA +K+
Sbjct: 106 HMGQITFGFSVLAKILKRGYPPDT----VTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQ 161
Query: 156 FSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERV 215
+ + + +L+ K G +++++ P+ Y+ + AL +S A +
Sbjct: 162 LNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGL 221
Query: 216 IEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYG 275
EM G ++AD T+S L + G ++A L E+ + + ++ Y L+
Sbjct: 222 FSEMTVKG-ISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280
Query: 276 QTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 335
+ G + E + + A I+Y ++ + ++ A+ F T D+
Sbjct: 281 KEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVH 340
Query: 336 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 395
++I + K ++ A L + ++ P T+ D ++G + D +++
Sbjct: 341 TYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEM 400
Query: 396 IDTGR 400
D G+
Sbjct: 401 RDRGQ 405
>gi|302780493|ref|XP_002972021.1| hypothetical protein SELMODRAFT_412471 [Selaginella moellendorffii]
gi|300160320|gb|EFJ26938.1| hypothetical protein SELMODRAFT_412471 [Selaginella moellendorffii]
Length = 2052
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 120/272 (44%), Gaps = 11/272 (4%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N TY +++ YC++ T +A ALLE MK+ + ++ +N ++T K G ++ ++
Sbjct: 1696 NAFTYSTIVRGYCEDGETRQALALLEHMKKAEVPANAKLYNIILTHLCKHGKEKEALDLL 1755
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M +S PD YTYN+ + AL V + A+ ++E M+ D T++ L
Sbjct: 1756 HSMATTSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQAR-ECPTDIVTYNTLIHGLCR 1814
Query: 242 AG----LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
G E+A R +E+ ++ Y +I + + ++ L L N
Sbjct: 1815 KGNGRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKV---LDLMHENG 1871
Query: 298 AN---ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAE 354
++Y +I + A F E + D+ N ++ + K G++E A
Sbjct: 1872 CAFDLVTYNMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSIVDGFCKAGKVEEAN 1931
Query: 355 ELKERARRRGADPNAKTWEIFSDYYLRNGDMK 386
+L + RG PN +T+ +D L+ G M+
Sbjct: 1932 KLFAEMKARGIFPNGRTYTSITDACLKAGRMQ 1963
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 103/250 (41%), Gaps = 44/250 (17%)
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK------------------- 220
+I E K SS +++TY+ +R + A ++E MK
Sbjct: 1684 LIAESKPSSFQANAFTYSTIVRGYCEDGETRQALALLEHMKKAEVPANAKLYNIILTHLC 1743
Query: 221 RDGR---------------VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 265
+ G+ A D T++ L + + G E A+ ++ ++ R D+
Sbjct: 1744 KHGKEKEALDLLHSMATTSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQARECPTDIV 1803
Query: 266 AYQFLITLYGQTGNLSEVYRIWRSLRL------AFPNTANISYLNMIQVLVNLKDLPGAE 319
Y LI + GN +R+ R+ RL +++Y +I L+ +K A+
Sbjct: 1804 TYNTLIHGLCRKGN--GRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQ 1861
Query: 320 KCFK-EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 378
K E+GCA +D+ N++I +AK G ++ A +L RG P+ T+ D
Sbjct: 1862 KVLDLMHENGCA-FDLVTYNMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSIVDG 1920
Query: 379 YLRNGDMKLA 388
+ + G ++ A
Sbjct: 1921 FCKAGKVEEA 1930
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 136/312 (43%), Gaps = 38/312 (12%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
ALK+ E M+ +G+ TV ++ + ++ A+ ++ ++ N +TY +L+N
Sbjct: 322 ALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALIN 381
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
YCK+ + E+A L + + + L + + FN+L+ Y K G E+ + + M +P
Sbjct: 382 GYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLP 441
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
++ TYN + + + ++ EM+ G V AD T++ L S + E +KA R
Sbjct: 442 NASTYNCLIVGFCREGKMEEVKNLLNEMQCRG-VKADTVTYNILISAWCEKKEPKKAARL 500
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
+ E+ ++ Y L+ Y GNL + +N
Sbjct: 501 IDEMLDKGLKPSHLTYNILLNGYCMEGNL--------------------------RAALN 534
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
L+ K+ E ++ NV+I Y ++G+LE+A L +G PN T
Sbjct: 535 LR---------KQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTT 585
Query: 372 WEIFSDYYLRNG 383
+EI + + G
Sbjct: 586 YEIIKEEMMEKG 597
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 154/353 (43%), Gaps = 24/353 (6%)
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
+ S N +T+ +++N CK KA +++ MK + + +N+L+ Y K G K+
Sbjct: 225 KISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKM 284
Query: 178 ---PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSN 234
AI++EM + + P+S T+NV + ++S A +V EEM+ G + T+++
Sbjct: 285 YKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQG-LKPTVVTYNS 343
Query: 235 LASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RL 292
L + G +A+ L E+ + N ++ Y LI Y + L E ++ ++ +
Sbjct: 344 LVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQG 403
Query: 293 AFPNTANISYLNMIQVLVNLKDLPGA---EKCF--KEWESGCATYDIRVTNVMIGAYAKE 347
PN I++ ++ + A +K K + +TY N +I + +E
Sbjct: 404 LTPNV--ITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTY-----NCLIVGFCRE 456
Query: 348 GRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWV 407
G++E + L + RG + T+ I + + K A +++ +D G
Sbjct: 457 GKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLK------ 510
Query: 408 PSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 460
PS T + + E ++ A + ++K V + LI+ Y G+
Sbjct: 511 PSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGK 563
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 130/311 (41%), Gaps = 2/311 (0%)
Query: 89 TVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEK 148
T+ D + V K+ DA V+ + S N +T+ L++ +CK+ A + E+
Sbjct: 270 TLIDGYCKMGRVGKMYKADAILKEMVE-NKVSPNSVTFNVLIDGFCKDENLSAALKVFEE 328
Query: 149 MKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVND 208
M+ L + + +NSL+ G + ++ EM +S++ P+ TYN +
Sbjct: 329 MQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKL 388
Query: 209 ISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQ 268
+ A + + + + G + + TF+ L Y + G E+A K + + + S Y
Sbjct: 389 LEEARELFDNIGKQG-LTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYN 447
Query: 269 FLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESG 328
LI + + G + EV + ++ ++Y +I K+ A + E
Sbjct: 448 CLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDK 507
Query: 329 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 388
N+++ Y EG L A L+++ + G N T+ + Y R G ++ A
Sbjct: 508 GLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDA 567
Query: 389 VDCLEKAIDTG 399
L + ++ G
Sbjct: 568 NGLLNEMLEKG 578
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 118/281 (41%), Gaps = 10/281 (3%)
Query: 156 FSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERV 215
S + N L++ K + + +EM I P+ T+N + L V ++ A V
Sbjct: 193 LSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDV 252
Query: 216 IEEMKRDGRVAADWTTFSNLASIYVE---AGLFEKAERALKELENRNAHRDLSAYQFLIT 272
+++MK G + T++ L Y + G KA+ LKE+ + + LI
Sbjct: 253 VDDMKVWG-FWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLID 311
Query: 273 LYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY 332
+ + NLS +++ ++ ++Y +++ L N L A+ E S
Sbjct: 312 GFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKP 371
Query: 333 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 392
++ N +I Y K+ LE A EL + ++G PN T+ Y + G M+ A
Sbjct: 372 NVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQ 431
Query: 393 EKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 433
+ ++ G ++P++ T + F +E ++ + L
Sbjct: 432 KVMLEKG------FLPNASTYNCLIVGFCREGKMEEVKNLL 466
>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Glycine max]
Length = 1012
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 155/347 (44%), Gaps = 22/347 (6%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY +LL+ +CK E AE +L+KM++ ++ + + F+S++ YAK G K ++
Sbjct: 375 NCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVL 434
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
++M +IMP+ + Y + + A +EMK G + + F L +
Sbjct: 435 RKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWG-LEENNIIFDILLNNLKR 493
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
+G ++A+ +K++ ++ + D+ Y L+ Y + GN S + + + ++
Sbjct: 494 SGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVA 553
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESG----CATYDIRVTNVMIGAYAKEGRLENAEELK 357
Y + + L+ L + E G C TY N ++ Y +G+ ENA +L
Sbjct: 554 YNALTKGLLRLGKYEPKSVFSRMIELGLTPDCVTY-----NSVMNTYFIQGKTENALDLL 608
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 417
+ G PN T+ I + G ++ + L + + G +VP+ + +
Sbjct: 609 NEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVG------YVPTPIIHKFLL 662
Query: 418 RHFEQEKDVDGAEGFLEILKKAVD---DLGVEVFEPLIRTYAAAGRT 461
+ + + + A+ L+I KK VD +L V+ LI G T
Sbjct: 663 KAYSRSRK---ADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMT 706
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 105/240 (43%), Gaps = 39/240 (16%)
Query: 139 TEKAEALLE---KMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYT 195
+ KA+A+L+ K+ ++ L + M +N+L+T+ + G +K ++ EM I D T
Sbjct: 668 SRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVT 727
Query: 196 YNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 255
YN +R + + A +M G ++ + TT++ L GL A++ + E+
Sbjct: 728 YNALIRGYCTGSHVEKAFNTYSQMLVSG-ISPNITTYNALLEGLSTNGLMRDADKLVSEM 786
Query: 256 ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDL 315
R + + Y L++ +G+ GN + S++L Y MI
Sbjct: 787 RERGLVPNATTYNILVSGHGRVGNKRD------SIKL---------YCEMIT-------- 823
Query: 316 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 375
K + TY NV+I YAK G++ A EL RG PN+ T+++
Sbjct: 824 -------KGFIPTTGTY-----NVLIQDYAKAGKMRQARELLNEMLTRGRIPNSSTYDVL 871
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/295 (20%), Positives = 130/295 (44%), Gaps = 11/295 (3%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
+ + +TY S++N Y + TE A LL +MK + + + +N L+ KTG EK+ +
Sbjct: 582 TPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVIS 641
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR--DGRVAADWTTFSNLAS 237
++ EM A +P + ++A + A+ +++ K+ D + + ++ L +
Sbjct: 642 VLHEMLAVGYVPTPIIHKFLLKAYSRSRK---ADAILQIHKKLVDMGLNLNQMVYNTLIT 698
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
+ G+ +KA L E+ + D+ Y LI Y ++ + + + + ++ +
Sbjct: 699 VLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISP 758
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
+Y +++ L + A+K E + N+++ + + G ++ +L
Sbjct: 759 NITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLY 818
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSET 412
+G P T+ + Y + G M+ A + L + + GR +P+S T
Sbjct: 819 CEMITKGFIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRGR------IPNSST 867
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 81/184 (44%), Gaps = 3/184 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N + Y +L+ C+ MT+KA +L +M + + +N+L+ Y H EK
Sbjct: 689 NQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTY 748
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+M S I P+ TYN + L+ + A++++ EM+ G V + TT++ L S +
Sbjct: 749 SQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRERGLV-PNATTYNILVSGHGR 807
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTAN 299
G + + E+ + Y LI Y + G + + + + R PN++
Sbjct: 808 VGNKRDSIKLYCEMITKGFIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRGRIPNSST 867
Query: 300 ISYL 303
L
Sbjct: 868 YDVL 871
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/329 (20%), Positives = 129/329 (39%), Gaps = 57/329 (17%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+H+TY +++ +CK + ++ LL +M + + F S+ N L+ Y + G + I+
Sbjct: 74 DHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQYAEWIM 133
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+ + D+ N + V +S A ++E+ ++G V D T++ L + + +
Sbjct: 134 GNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNG-VKPDIVTYNTLVNAFCK 192
Query: 242 AGLFEKAERALKEL-----------------ENRNAHRDL-------------------- 264
G KAE + E+ E + RDL
Sbjct: 193 RGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRGI 252
Query: 265 ----SAYQFLI-------------TLYG--QTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
S Y+ +I LYG + G L+E + R + + ++SY +
Sbjct: 253 DDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTI 312
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
I L+ + A + + D+ + M+ K G+ + AEE+ + +
Sbjct: 313 ISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNL 372
Query: 366 DPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
PN T+ D + + GD++ A L+K
Sbjct: 373 VPNCVTYTALLDGHCKVGDVEFAETVLQK 401
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 88/425 (20%), Positives = 156/425 (36%), Gaps = 47/425 (11%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A+++ M + + V AI LD + +AA ++ ++ +N++ + LLN
Sbjct: 430 AVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLN 489
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS---- 187
+ ++A++L++ + + ++SLM Y K G+ +++QEM
Sbjct: 490 NLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQF 549
Query: 188 ------------------------------SIMPDSYTYNVWMRALAAVNDISGAERVIE 217
+ PD TYN M A ++
Sbjct: 550 DVVAYNALTKGLLRLGKYEPKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLN 609
Query: 218 EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQT 277
EMK G V + T++ L + G EK L E+ ++FL+ Y ++
Sbjct: 610 EMKSYG-VMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKAYSRS 668
Query: 278 GNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVT 337
+ +I + L N + Y +I VL L A E + DI
Sbjct: 669 RKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTY 728
Query: 338 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
N +I Y +E A + G PN T+ + NG M+ A +K +
Sbjct: 729 NALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDA----DKLVS 784
Query: 398 TGRGDGGKWVPSSETIRTFMR-HFEQEKDVDGAEGFLEILKKA-VDDLGVEVFEPLIRTY 455
R G VP++ T + H D + + E++ K + G + LI+ Y
Sbjct: 785 EMRERG--LVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTG--TYNVLIQDY 840
Query: 456 AAAGR 460
A AG+
Sbjct: 841 AKAGK 845
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 80/179 (44%), Gaps = 4/179 (2%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + +TY +L+ YC EKA +M + + +N+L+ + G
Sbjct: 722 SADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADK 781
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
++ EM+ ++P++ TYN+ + V + + ++ EM G + T++ L Y
Sbjct: 782 LVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTT-GTYNVLIQDY 840
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
+AG +A L E+ R + S Y LI + + E+ R+ L+L++ N A
Sbjct: 841 AKAGKMRQARELLNEMLTRGRIPNSSTYDVLICGWCKLSCQPEMDRL---LKLSYQNEA 896
>gi|414871052|tpg|DAA49609.1| TPA: hypothetical protein ZEAMMB73_878928 [Zea mays]
Length = 807
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 117/267 (43%), Gaps = 6/267 (2%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY ++++ CK +A + + + E + + NSL+ + GH +IP +I+ M
Sbjct: 287 TYSTIIHGLCKVGSVNEAFDIFQSVTEEGMELDIVTCNSLINGFRLHGHTREIPKMIEMM 346
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ + PD TY + + D+ R+ +++ G + + T+S L + + GL
Sbjct: 347 RGLGVEPDVVTYTILITGHCEGGDVEEGMRIRKDILGQG-IELNIVTYSVLINALFKKGL 405
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA---FPNTANIS 301
F + E E+ + D+ AY LI + + G + ++W + + P + N
Sbjct: 406 FYEVENLFGEICSIGLELDVIAYSILIHGFCKLGEIGRALQVWNLMCCSQRVIPTSVN-- 463
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
+++++ L L A + S D+ + NV+I YAK G + NA +L +
Sbjct: 464 HVSILLGLCKKGFLDEARSYLETVASKYQPSDVVLYNVVIDGYAKVGDIGNAVQLYDAII 523
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLA 388
G P T Y + GD+ +A
Sbjct: 524 MAGMCPTIVTCNSLLYGYCKFGDLHMA 550
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/302 (20%), Positives = 114/302 (37%), Gaps = 46/302 (15%)
Query: 104 QGIDAAENY----FVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSM 159
QG D+A + E + + + +L N Y + M A +L KM LN+ S
Sbjct: 124 QGSDSAPTLCDILWCGFREWDSSSIVWDALANSYARAQMNHDALYVLSKMNSLNMQISIT 183
Query: 160 PFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM 219
++SL+ K + AI +EM++ I P Y++ + + L I A ++E
Sbjct: 184 TYDSLLYSLRKA---DVALAIFKEMESCGIPPSDYSHGILIDGLCKQGKIGEALSFLQET 240
Query: 220 KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGN 279
+++G+ TF+ L S G + A+ + + Y +I + G+
Sbjct: 241 RKEGKFKPLGMTFNTLMSALCNWGFIQDAKSVFCLMLKYGLNPSRHTYSTIIHGLCKVGS 300
Query: 280 LSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
++E + I++S+ E G DI N
Sbjct: 301 VNEAFDIFQSVT----------------------------------EEG-MELDIVTCNS 325
Query: 340 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD----MKLAVDCLEKA 395
+I + G ++ E R G +P+ T+ I + GD M++ D L +
Sbjct: 326 LINGFRLHGHTREIPKMIEMMRGLGVEPDVVTYTILITGHCEGGDVEEGMRIRKDILGQG 385
Query: 396 ID 397
I+
Sbjct: 386 IE 387
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/357 (19%), Positives = 130/357 (36%), Gaps = 51/357 (14%)
Query: 116 LPETSKNHLTYGSLLNCYCKELMTEKAEALL-EKMKELNLGFSSMPFNSLMTLYAKTGHP 174
+P + +H G L++ CK+ +A + L E KE M FN+LM+ G
Sbjct: 210 IPPSDYSH---GILIDGLCKQGKIGEALSFLQETRKEGKFKPLGMTFNTLMSALCNWGFI 266
Query: 175 EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIE----------------- 217
+ ++ M + P +TY+ + L V ++ A + +
Sbjct: 267 QDAKSVFCLMLKYGLNPSRHTYSTIIHGLCKVGSVNEAFDIFQSVTEEGMELDIVTCNSL 326
Query: 218 -----------------EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 260
EM R V D T++ L + + E G E+ R K++ +
Sbjct: 327 INGFRLHGHTREIPKMIEMMRGLGVEPDVVTYTILITGHCEGGDVEEGMRIRKDILGQGI 386
Query: 261 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 320
++ Y LI + G EV ++ + I+Y +I L ++ A
Sbjct: 387 ELNIVTYSVLINALFKKGLFYEVENLFGEICSIGLELDVIAYSILIHGFCKLGEIGRA-- 444
Query: 321 CFKEWESGCATYDIRVTNV----MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 376
+ W C + + T+V ++ K+G L+ A E + + + +
Sbjct: 445 -LQVWNLMCCSQRVIPTSVNHVSILLGLCKKGFLDEARSYLETVASKYQPSDVVLYNVVI 503
Query: 377 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 433
D Y + GD+ AV + I G P+ T + + + + D+ AE +
Sbjct: 504 DGYAKVGDIGNAVQLYDAIIMAGM------CPTIVTCNSLLYGYCKFGDLHMAESYF 554
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 48/102 (47%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY ++ CK+LM A+ +L+ M +P+N+L+ + +T + +
Sbjct: 600 NAITYSVVIKGLCKQLMFHDAKNVLDDMYREGFDADPIPYNTLIQGFCETQDAKNAFYVY 659
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
+ M +MP TYN+ + L + AE +E ++ G
Sbjct: 660 ELMVCRGVMPSPVTYNLLVNVLCLKGLVIHAEMKLESFRKQG 701
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 69/147 (46%), Gaps = 3/147 (2%)
Query: 97 LDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNL 154
+D AKV I A + + + +T SLL YCK AE+ ++ +L
Sbjct: 503 IDGYAKVGDIGNAVQLYDAIIMAGMCPTIVTCNSLLYGYCKFGDLHMAESYFMAIQLSDL 562
Query: 155 GFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAER 214
+++ + +LM ++ G + +I +EM I P++ TY+V ++ L A+
Sbjct: 563 LPTTVTYTTLMDALSEAGKVHSMLSIFKEMTGKGIRPNAITYSVVIKGLCKQLMFHDAKN 622
Query: 215 VIEEMKRDGRVAADWTTFSNLASIYVE 241
V+++M R+G AD ++ L + E
Sbjct: 623 VLDDMYREG-FDADPIPYNTLIQGFCE 648
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 44/255 (17%), Positives = 105/255 (41%), Gaps = 8/255 (3%)
Query: 124 LTYGSLLNCYCKELMTEKA----EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
+TY L+ +C+ E+ + +L + ELN+ S+ N+L K G ++
Sbjct: 356 VTYTILITGHCEGGDVEEGMRIRKDILGQGIELNIVTYSVLINALF----KKGLFYEVEN 411
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+ E+ + + D Y++ + + +I A +V M RV ++
Sbjct: 412 LFGEICSIGLELDVIAYSILIHGFCKLGEIGRALQVWNLMCCSQRVIPTSVNHVSILLGL 471
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
+ G ++A L+ + ++ D+ Y +I Y + G++ +++ ++ +A
Sbjct: 472 CKKGFLDEARSYLETVASKYQPSDVVLYNVVIDGYAKVGDIGNAVQLYDAIIMAGMCPTI 531
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
++ +++ DL AE F + ++ A ++ G++ + + +
Sbjct: 532 VTCNSLLYGYCKFGDLHMAESYFMAIQLSDLLPTTVTYTTLMDALSEAGKVHSMLSIFKE 591
Query: 360 ARRRGADPNAKTWEI 374
+G PNA T+ +
Sbjct: 592 MTGKGIRPNAITYSV 606
>gi|326529783|dbj|BAK04838.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 490
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 160/372 (43%), Gaps = 14/372 (3%)
Query: 95 IHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLNCYCKELMTEKAEALLEKMKEL 152
I +D + D +F L +T + + +TY SLL C+C TE+A LL
Sbjct: 104 ILIDCCHRACRPDLGPAFFGRLLKTGITPDVITYSSLLQCFCDMKRTEEALDLLLHRVSG 163
Query: 153 NLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM--KASSIMPDSYTYNVWMRALAAVNDIS 210
+L ++ ++ ++ + G + +++ M K + P +YN+ + +IS
Sbjct: 164 DLP-DAISYSVILKSFCDDGRSQCALDLLRMMAEKGAEHSPSVVSYNLVIHGFFKEGEIS 222
Query: 211 GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 270
A + M + G V D T++++ + +A +KAE L+ + + + D Y L
Sbjct: 223 KACHLFHGMIQQGYV-PDVVTYNSVINALCKARAMDKAEVVLRSMVHNSVQPDAVTYNSL 281
Query: 271 ITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCA 330
I Y G L E +R+ + +R + ++ +++ L + AE+ F
Sbjct: 282 IHGYLILGQLKETFRLLKVMRSQGVMPSLVTCSSVMDYLCKHGKIKEAEEMFYSRAVNGR 341
Query: 331 TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
DI + ++M+ YA EG L +L E R G P+ + I + Y + G M +A+
Sbjct: 342 KPDIVLYSIMLHGYAIEGSLVKMIDLCEVMARDGVVPDLPCFNILINAYAKYGMMDVAML 401
Query: 391 CLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA-EGFLEILKKAVDDLGVEVFE 449
E + G P+ T T + F + +D A E F E++ V L EV+
Sbjct: 402 FFEDMLKQGVK------PNEFTYLTVISAFCKMGRMDDAMEKFSEMIDMGV-PLDTEVYM 454
Query: 450 PLIRTYAAAGRT 461
++ Y G +
Sbjct: 455 CMVEGYLNHGDS 466
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 96/250 (38%), Gaps = 3/250 (1%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY S++N CK +KAE +L M ++ ++ +NSL+ Y G ++ +++
Sbjct: 241 VTYNSVINALCKARAMDKAEVVLRSMVHNSVQPDAVTYNSLIHGYLILGQLKETFRLLKV 300
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M++ +MP T + M L I AE + +GR D +S + Y G
Sbjct: 301 MRSQGVMPSLVTCSSVMDYLCKHGKIKEAEEMFYSRAVNGR-KPDIVLYSIMLHGYAIEG 359
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
K + + DL + LI Y + G + + + +YL
Sbjct: 360 SLVKMIDLCEVMARDGVVPDLPCFNILINAYAKYGMMDVAMLFFEDMLKQGVKPNEFTYL 419
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I + + A + F E D V M+ Y G AEE + +
Sbjct: 420 TVISAFCKMGRMDDAMEKFSEMIDMGVPLDTEVYMCMVEGYLNHGDSMKAEEFI--TKMK 477
Query: 364 GADPNAKTWE 373
D + K W+
Sbjct: 478 NMDIHHKPWK 487
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/231 (19%), Positives = 93/231 (40%), Gaps = 10/231 (4%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
+N L+ + P+ PA + + I PD TY+ ++ D+ E ++ +
Sbjct: 102 YNILIDCCHRACRPDLGPAFFGRLLKTGITPDVITYSSLLQCFC---DMKRTEEALDLLL 158
Query: 221 RDGRVAADW---TTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYG-- 275
RV+ D ++S + + + G + A L+ + + A S + + ++G
Sbjct: 159 H--RVSGDLPDAISYSVILKSFCDDGRSQCALDLLRMMAEKGAEHSPSVVSYNLVIHGFF 216
Query: 276 QTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 335
+ G +S+ ++ + ++Y ++I L + + AE + D
Sbjct: 217 KEGEISKACHLFHGMIQQGYVPDVVTYNSVINALCKARAMDKAEVVLRSMVHNSVQPDAV 276
Query: 336 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 386
N +I Y G+L+ L + R +G P+ T DY ++G +K
Sbjct: 277 TYNSLIHGYLILGQLKETFRLLKVMRSQGVMPSLVTCSSVMDYLCKHGKIK 327
>gi|242039357|ref|XP_002467073.1| hypothetical protein SORBIDRAFT_01g019180 [Sorghum bicolor]
gi|241920927|gb|EER94071.1| hypothetical protein SORBIDRAFT_01g019180 [Sorghum bicolor]
Length = 808
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 118/267 (44%), Gaps = 6/267 (2%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY ++++ CK +A + + + E + + NSL+ + GH +IP +I+ M
Sbjct: 288 TYSTIIHGLCKIGSVSEAFNIFQSVTEEGMELDIVTCNSLINGFRLHGHTREIPKMIEMM 347
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ + PD TY + + D+ ++ +++ G + + T+S L + + GL
Sbjct: 348 RGLGVEPDIVTYTILIAGHCEGGDVEEGMKIRKDILGQG-MELNIVTYSVLINALFKKGL 406
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWR---SLRLAFPNTANIS 301
F + E L E+ + D+ AY LI Y + G + ++W S + P + N
Sbjct: 407 FYEVENLLGEICSVGLELDVIAYSILIHGYSKLGEIGRALQVWNLMCSSQRVTPTSVN-- 464
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
+++++ L L A + S D+ + NV+I YAK G + NA +L +
Sbjct: 465 HVSILLGLCKKGFLDEARSYLETIASKYQPSDVVLYNVVIDGYAKVGDIGNAVQLYDAII 524
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLA 388
G P T Y + GD+ +A
Sbjct: 525 MAGMCPTIVTCNSLLYGYCKFGDLHMA 551
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/287 (19%), Positives = 122/287 (42%), Gaps = 13/287 (4%)
Query: 104 QGIDAAENY----FVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSM 159
QG D+A + E N + + +L N Y + M A +L KM LN+ S
Sbjct: 125 QGSDSAPTLCDILWSGFKEWDSNSIVWDALANSYARAQMNHDALYVLSKMSSLNMQISIT 184
Query: 160 PFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM 219
++SL+ K + I +EM++ I P Y++++ + L + I A ++E+
Sbjct: 185 TYDSLLYSLRKA---DVALEIFKEMESCGIPPSDYSHSILIDGLCKQDKIGEALSFLQEI 241
Query: 220 KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGN 279
+++G+ TF+ L S G + A+ + + Y +I + G+
Sbjct: 242 RKEGKFIPLGMTFNTLMSALCNWGFIQDAKSVFCLMLKYGLNPSRHTYSTIIHGLCKIGS 301
Query: 280 LSEVYRIWRSLR---LAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 336
+SE + I++S+ + S +N ++ + +++P K + DI
Sbjct: 302 VSEAFNIFQSVTEEGMELDIVTCNSLINGFRLHGHTREIP---KMIEMMRGLGVEPDIVT 358
Query: 337 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
++I + + G +E ++++ +G + N T+ + + + G
Sbjct: 359 YTILIAGHCEGGDVEEGMKIRKDILGQGMELNIVTYSVLINALFKKG 405
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 48/102 (47%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY ++ CK+ M A+ +L+ M +P+N+L+ + +T + +
Sbjct: 601 NAVTYSVVIKGLCKQFMFHDAKNVLDDMCIEGFDADPIPYNTLIQGFCETQDAKNAFGVY 660
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
+ M +MP TYN+ + L + + AE +E ++ G
Sbjct: 661 ELMVFRGVMPTPVTYNLLVNVLCSKGLVIHAEMQLESFRKQG 702
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 61/347 (17%), Positives = 142/347 (40%), Gaps = 23/347 (6%)
Query: 46 FLKSKKRVFKWEVGDTLKKLRD--RKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKV 103
F++ K VF + L R + + K+ E + ++V+++ + LD+V
Sbjct: 266 FIQDAKSVFCLMLKYGLNPSRHTYSTIIHGLCKIGSVSEAFNIFQSVTEEGMELDIVTCN 325
Query: 104 QGIDA--AENYFVDLPE---------TSKNHLTYGSLLNCYC-----KELMTEKAEALLE 147
I+ + ++P+ + +TY L+ +C +E M + + L +
Sbjct: 326 SLINGFRLHGHTREIPKMIEMMRGLGVEPDIVTYTILIAGHCEGGDVEEGMKIRKDILGQ 385
Query: 148 KMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVN 207
M ELN+ S+ N+L K G ++ ++ E+ + + D Y++ + + +
Sbjct: 386 GM-ELNIVTYSVLINALF----KKGLFYEVENLLGEICSVGLELDVIAYSILIHGYSKLG 440
Query: 208 DISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAY 267
+I A +V M RV ++ + G ++A L+ + ++ D+ Y
Sbjct: 441 EIGRALQVWNLMCSSQRVTPTSVNHVSILLGLCKKGFLDEARSYLETIASKYQPSDVVLY 500
Query: 268 QFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES 327
+I Y + G++ +++ ++ +A ++ +++ DL AE F +
Sbjct: 501 NVVIDGYAKVGDIGNAVQLYDAIIMAGMCPTIVTCNSLLYGYCKFGDLHMAESYFTAIQL 560
Query: 328 GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 374
++ A ++ G++ + L + +G PNA T+ +
Sbjct: 561 SDLLPTTVTYTTLMDALSEAGKVHSMLSLFKEMTGKGIKPNAVTYSV 607
Score = 41.6 bits (96), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 68/147 (46%), Gaps = 3/147 (2%)
Query: 97 LDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNL 154
+D AKV I A + + + +T SLL YCK AE+ ++ +L
Sbjct: 504 IDGYAKVGDIGNAVQLYDAIIMAGMCPTIVTCNSLLYGYCKFGDLHMAESYFTAIQLSDL 563
Query: 155 GFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAER 214
+++ + +LM ++ G + ++ +EM I P++ TY+V ++ L A+
Sbjct: 564 LPTTVTYTTLMDALSEAGKVHSMLSLFKEMTGKGIKPNAVTYSVVIKGLCKQFMFHDAKN 623
Query: 215 VIEEMKRDGRVAADWTTFSNLASIYVE 241
V+++M +G AD ++ L + E
Sbjct: 624 VLDDMCIEG-FDADPIPYNTLIQGFCE 649
>gi|302763819|ref|XP_002965331.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
gi|300167564|gb|EFJ34169.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
Length = 806
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 112/247 (45%), Gaps = 14/247 (5%)
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 187
SL+N Y + + +A + + + E + S F ++++ YA GHP + I +EM A
Sbjct: 393 SLINMYARSGLLAEAREVFDSILENSKTVVS--FTTMISAYAHNGHPRQALEIFREMTAR 450
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
+ P+ T+ + A A+ D++ + E M G ++D +++L +Y + G
Sbjct: 451 GVAPNEITFATVLAACVAIGDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGF 510
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW-RSLRLAF-PNTANISYLNM 305
A R + ++ +DL A+ +I Q+GN ++ R L+ P+ A +S L
Sbjct: 511 AARVFETMKT----KDLVAWTTIIAANVQSGNNRAALDLYDRMLQSGIHPDIATLSTL-- 564
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
+ NL DL EK ++ D N + YAK G LE A L R RG+
Sbjct: 565 LVACANLGDLAMGEKIHRQALRSKLEQDAHFQNALAAMYAKCGSLEKATRLYRRC--RGS 622
Query: 366 DPNAKTW 372
D TW
Sbjct: 623 D--VATW 627
>gi|302809589|ref|XP_002986487.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
gi|300145670|gb|EFJ12344.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
Length = 773
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 155/374 (41%), Gaps = 20/374 (5%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +LL+ + E+A + + M E + ++ + SL+ +A + ++ +++E
Sbjct: 189 ITYNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVDTFAGSNQLGRVEELLRE 248
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ PD YN + A A ++ GA V ++M+R G A D T+S L IY G
Sbjct: 249 MEDEGNSPDIAGYNSLIEAYADAGNVHGAAGVFKQMQRGG-CAPDVETYSTLLRIYGNQG 307
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
FE+ +++ + ++ Y LI ++G+ G E ++ + + + +Y
Sbjct: 308 CFEQVRSLFSDMKELSTPPTVATYNSLIQVFGEGGYFQESINLFHDMVDSGVKPDDATYS 367
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
++ V A K + + +T + + +I +Y K ++A R R
Sbjct: 368 ALLSVCGRGGLTREAAKIHQHMLTNESTPSLEASAGLISSYGKMAMYKDALVSYYRIREA 427
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQE 423
G DP ++ Y + G A L G P S ++ + M + +
Sbjct: 428 GLDPQVSAYDALIQGYAKGGLYVEAGSTL-----YAMNKAGFQAPVS-SVNSVMEAYSKV 481
Query: 424 KDVDGA-EGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKK 482
D A E F E+ +K ++ E L+ Y G +L K E V + E SK
Sbjct: 482 GLHDEALEFFSELQQKEGSEVDERTHETLLGVYCDMG-----LLEEAKEEFVIIKETSKV 536
Query: 483 -------LLEAICV 489
LL ++CV
Sbjct: 537 PGARVYCLLLSLCV 550
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/342 (19%), Positives = 135/342 (39%), Gaps = 40/342 (11%)
Query: 62 LKKLRDRKLYYPALKLSENMEKRGMNK-TVSDQAIHLDLVAKVQGIDAAENYFVDLPETS 120
++ R ++ AL+L + M+++ K T I + ++ + ++ F D+PE
Sbjct: 53 FREFAARSDWHRALRLFKYMQRQQWCKPTEHIYTIMIGIMGREGLLEKCSEIFEDMPEND 112
Query: 121 K--NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKI 177
N + +L+N Y + E + LL +MK+ + + + +N+++ +K G E +
Sbjct: 113 VKWNVYAFTALINAYGRNGQYEASLHLLARMKKERVEPNLITYNTVLNACSKGGLDWEGL 172
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
+ +M+ I PD TYN + A ++ + A V + M G V AD T+ +L
Sbjct: 173 LNLFAQMRHEGIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNESG-VVADAVTYKSLVD 231
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
+ + + E L+E+E+ D++ Y LI Y GN+
Sbjct: 232 TFAGSNQLGRVEELLREMEDEGNSPDIAGYNSLIEAYADAGNVH---------------- 275
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
GA FK+ + G D+ + ++ Y +G E L
Sbjct: 276 -------------------GAAGVFKQMQRGGCAPDVETYSTLLRIYGNQGCFEQVRSLF 316
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ P T+ + G + +++ +D+G
Sbjct: 317 SDMKELSTPPTVATYNSLIQVFGEGGYFQESINLFHDMVDSG 358
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 116/284 (40%), Gaps = 18/284 (6%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY +LL Y + E+ +L MKEL+ + +NSL+ ++ + G+ ++ + +M
Sbjct: 295 TYSTLLRIYGNQGCFEQVRSLFSDMKELSTPPTVATYNSLIQVFGEGGYFQESINLFHDM 354
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFS-----NLASIY 239
S + PD TY+ AL +V G R E K + + +T S L S Y
Sbjct: 355 VDSGVKPDDATYS----ALLSVCGRGGLTR--EAAKIHQHMLTNESTPSLEASAGLISSY 408
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
+ +++ A + + +SAY LI Y + G E ++ A A
Sbjct: 409 GKMAMYKDALVSYYRIREAGLDPQVSAYDALIQGYAKGGLYVEAGSTLYAMNKA-GFQAP 467
Query: 300 ISYLNMIQVL---VNLKDLPGAEKCFKEWESGCAT-YDIRVTNVMIGAYAKEGRLENAEE 355
+S +N + V L D A + F E + + D R ++G Y G LE A+E
Sbjct: 468 VSSVNSVMEAYSKVGLHD--EALEFFSELQQKEGSEVDERTHETLLGVYCDMGLLEEAKE 525
Query: 356 LKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ P A+ + + +R A L++ I G
Sbjct: 526 EFVIIKETSKVPGARVYCLLLSLCVRRSKWDYATQLLDEMIAAG 569
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 153/386 (39%), Gaps = 33/386 (8%)
Query: 108 AAENYFVDLPETSK-NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMT 166
A+ Y + L S+ N T +++ YCK L + + ++ +M++ + + N ++
Sbjct: 143 TADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVD 202
Query: 167 LYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA 226
+ G E A+I M + I P TYN ++ L A V M G VA
Sbjct: 203 ARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACG-VA 261
Query: 227 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
D +F+ L + AG E+A R KE+ R D+ ++ LI L+ + G +
Sbjct: 262 PDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEY 321
Query: 287 WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAK 346
R +R + Y +I + A + E + D+ N ++ K
Sbjct: 322 LREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCK 381
Query: 347 EGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID--------- 397
E RL +AEEL + RG P+ T+ Y R+G+++ A+ + D
Sbjct: 382 ERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVT 441
Query: 398 --------TGRGDGGK----W--------VPSSETIRTFMRHFEQEKDVDGAEGFL-EIL 436
+GD GK W P+ T + ++ VD A FL E++
Sbjct: 442 YNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMV 501
Query: 437 KKAVDDLGVEVFEPLIRTYAAAGRTS 462
K + + + +I+ Y +G S
Sbjct: 502 NKGIVP-NIMTYNSIIKGYCRSGNVS 526
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 120/274 (43%), Gaps = 5/274 (1%)
Query: 113 FVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTG 172
F LP+ +TY +LLN CKE AE LL +MKE + F +L+ Y + G
Sbjct: 363 FGCLPDV----VTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDG 418
Query: 173 HPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTF 232
+ EK + + PD TYN + + D+ A + ++M + + T+
Sbjct: 419 NIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSR-EIFPNHVTY 477
Query: 233 SNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL 292
S L + E G + A L E+ N+ ++ Y +I Y ++GN+S+ + +R
Sbjct: 478 SILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRH 537
Query: 293 AFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLEN 352
I+Y +I V + A K E+ D N++I ++ G ++
Sbjct: 538 DKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQE 597
Query: 353 AEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 386
A+ + ++ RG +P+ T+ + ++ G+ K
Sbjct: 598 ADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSK 631
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 113/272 (41%), Gaps = 5/272 (1%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+++ L+ + + + A L +M+E L + + ++ + + G + + E
Sbjct: 300 VSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDE 359
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M A +PD TYN + L +S AE ++ EMK G V D TF+ L Y G
Sbjct: 360 MVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERG-VPPDLCTFTTLIHGYCRDG 418
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANIS 301
EKA + + ++ D+ Y LI + G+L + +W + R FPN +++
Sbjct: 419 NIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPN--HVT 476
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I + A E + +I N +I Y + G + ++ + R
Sbjct: 477 YSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMR 536
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
P+ T+ Y++ G M A + L+
Sbjct: 537 HDKVMPDLITYNTLIHGYVKEGKMHEAFNLLK 568
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 93/230 (40%), Gaps = 47/230 (20%)
Query: 89 TVSDQAIHLDLVAKVQGIDA---------AENYFVDLP--ETSKNHLTYGSLLNCYCKEL 137
T+SDQ + D+V ID A + D+ E NH+TY L++ +C++
Sbjct: 429 TISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKG 488
Query: 138 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 197
+ A A L++M + + M +NS++ Y ++G+ K + +M+ +MPD TYN
Sbjct: 489 QVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYN 548
Query: 198 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 257
+ YV+ G +A LK +EN
Sbjct: 549 TLIHG------------------------------------YVKEGKMHEAFNLLKIMEN 572
Query: 258 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 307
N D Y +I+ + GN+ E +++ + +Y++MI
Sbjct: 573 ENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMIN 622
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 123/266 (46%), Gaps = 11/266 (4%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDA-AENYFVDLPETSKNHL-----TYG 127
AL+ E+M +RG+ TV+ +L+ +DA A + + L E KN TY
Sbjct: 238 ALQYREDMVQRGIAMTVATY----NLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYN 293
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 187
L+N YCKE +KA + E+M + + +++ + SL+ ++++ G ++ +
Sbjct: 294 ILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKK 353
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
I PD YN + + D+ A ++ EM++ R+ D T++ L + G ++
Sbjct: 354 GIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKK-RIPPDDMTYNTLMRGFCLLGRLDE 412
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 307
A + E+ R DL +Y LI+ Y G++ + R+ + N ++Y +IQ
Sbjct: 413 ARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQ 472
Query: 308 VLVNLKDLPGAEKCFKEWESGCATYD 333
L ++ AE KE + T D
Sbjct: 473 GLCKIRQGDDAENLMKEMVAKGITPD 498
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 142/323 (43%), Gaps = 19/323 (5%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKM-KELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
TY +L++ +CK E A + ++M + + S++ +N+L+ Y G + ++
Sbjct: 185 TYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYRED 244
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M I TYN+ M AL S A V+EEM+++G + D T++ L + Y + G
Sbjct: 245 MVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNG-FSPDVFTYNILINGYCKEG 303
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW-----RSLRLAFPNTA 298
+KA +E+ + Y LI ++ + G + E R++ + +R P+
Sbjct: 304 NEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIR---PDV- 359
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+ Y +I D+ A + E E D N ++ + GRL+ A L +
Sbjct: 360 -VMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLID 418
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 418
+RG P+ ++ Y GD+K A+ ++ +D G + P+ T ++
Sbjct: 419 EMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKG------FNPTLMTYNALIQ 472
Query: 419 HFEQEKDVDGAEGFL-EILKKAV 440
+ + D AE + E++ K +
Sbjct: 473 GLCKIRQGDDAENLMKEMVAKGI 495
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 110/269 (40%), Gaps = 3/269 (1%)
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
E + + + Y +L+ YC + A E M + + + +N LM
Sbjct: 214 EVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDA 273
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
A+++EM+ + PD +TYN+ + + A V EEM + G V A T+++L
Sbjct: 274 YAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKG-VRATAVTYTSLIY 332
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
++ G ++ +R + D+ Y LI + G++ Y I +
Sbjct: 333 VFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPP 392
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
+++Y +++ L L A E D+ N +I Y+ +G +++A ++
Sbjct: 393 DDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVR 452
Query: 358 ERARRRGADPNAKTWE--IFSDYYLRNGD 384
+ +G +P T+ I +R GD
Sbjct: 453 DEMMDKGFNPTLMTYNALIQGLCKIRQGD 481
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 103/256 (40%), Gaps = 15/256 (5%)
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 196
L + A AL + L L + FN ++ TG P + ++++M P++ TY
Sbjct: 95 LPSAPAFALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQMPR----PNAVTY 150
Query: 197 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 256
N + A + A V+ EM+ G +A D T++ L S + + G E A + E+
Sbjct: 151 NTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEML 210
Query: 257 NRN-AHRDLSAYQFLITLYGQTGNLSEV--YR---IWRSLRLAFPNTANISYLNMIQVLV 310
+ Y LI Y G L YR + R + + +Y ++ L
Sbjct: 211 TKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTV-----ATYNLLMHALF 265
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
A +E + + D+ N++I Y KEG + A E+ E ++G A
Sbjct: 266 MDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAV 325
Query: 371 TWEIFSDYYLRNGDMK 386
T+ + R G ++
Sbjct: 326 TYTSLIYVFSRKGQVQ 341
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 66/146 (45%), Gaps = 1/146 (0%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y +L+N +C E+A ++ +M++ + M +N+LM + G ++ +I EM
Sbjct: 362 YNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMT 421
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
I PD +YN + + DI A RV +EM G T++ L +
Sbjct: 422 KRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKG-FNPTLMTYNALIQGLCKIRQG 480
Query: 246 EKAERALKELENRNAHRDLSAYQFLI 271
+ AE +KE+ + D S Y LI
Sbjct: 481 DDAENLMKEMVAKGITPDDSTYISLI 506
>gi|410110065|gb|AFV61112.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
citrodora]
Length = 435
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 122/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 13 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 72
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S PD YN + A +I EMK G V + ++S L ++Y
Sbjct: 73 IFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARALISEMKTAG-VMPNTASYSTLLTMY 131
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ +R T
Sbjct: 132 VENKKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIETNV 191
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 192 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 251
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 252 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 291
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 109/221 (49%), Gaps = 20/221 (9%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 224 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML 283
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S + D Y + A ++ A+R++ E+K + D T LA
Sbjct: 284 FQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKSPDNIPRD-TAIHILAG--- 339
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + +D++ ++ +I L Y + N EV+ R L FP++
Sbjct: 340 -AGRIEEATYVFRQAIDAGEVKDITVFERMIHLFSKYKKYANAVEVFDKMRGLGY-FPDS 397
Query: 298 ANISYLNMIQVLVN----LKDLPGAEKCFKEW-ESGCATYD 333
N+I +++N L +L A + E E GC D
Sbjct: 398 ------NVIALVLNAYGKLHELDKANDVYMEMQEVGCVFSD 432
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 90/211 (42%), Gaps = 8/211 (3%)
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+ EM+ ++ PD YTY+ + A +++M++D RV D +SNL +
Sbjct: 2 GLFDEMRERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIEL 60
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPN 296
+ + KA L+ DL AY +I ++G+ E + ++ A PN
Sbjct: 61 SRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARALISEMKTAGVMPN 120
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
TA SY ++ + V K A F E D+ N+MI Y + G + A++L
Sbjct: 121 TA--SYSTLLTMYVENKKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 178
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDMKL 387
R+ G + N ++ Y GD +L
Sbjct: 179 FWGMRKMGIETNVVSYNTLLRVY---GDAEL 206
>gi|255661178|gb|ACU25758.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 352
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 122/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 6 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSXKLCDYSKAIS 65
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S MPD YN + A +I EM+ G V + ++S L ++Y
Sbjct: 66 IFSRLKRSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAG-VMPNTASYSTLLTMY 124
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ +R
Sbjct: 125 VENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 245 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 284
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 8/202 (3%)
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
++ PD YTY+ + A +++M++D RV D +SNL + + + K
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIELSXKLCDYSK 62
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNM 305
A L+ DL AY +I ++G+ E + +R A PNTA SY +
Sbjct: 63 AISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTA--SYSTL 120
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
+ + V K A F E D+ N+MI Y + G + A++L R+ G
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180
Query: 366 DPNAKTWEIFSDYYLRNGDMKL 387
+PN ++ Y GD +L
Sbjct: 181 EPNVVSYNTLLRVY---GDAEL 199
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 83/185 (44%), Gaps = 1/185 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +Y +LL Y + +A ++ +M+E+ N ++ +Y + G ++ +
Sbjct: 113 NTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 172
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M+ I P+ +YN +R A + M+R + + T++++ IY +
Sbjct: 173 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN-IEQNVVTYNSMMMIYGK 231
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
EKA ++E++NR + Y +I+++G+ G L +++ LR + +
Sbjct: 232 TLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVL 291
Query: 302 YLNMI 306
Y MI
Sbjct: 292 YQTMI 296
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 61/108 (56%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML 276
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAAD 228
Q++++S + D Y + A ++ A+R++ E+KR + D
Sbjct: 277 FQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 324
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 100/225 (44%), Gaps = 3/225 (1%)
Query: 69 KLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTY 126
KL+ A L M G+ + + L + + + A + F ++ E + T
Sbjct: 93 KLFREARSLISEMRTAGVMPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTC 152
Query: 127 GSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKA 186
+++ Y + M ++A+ L M+++ + + + +N+L+ +Y + + + M+
Sbjct: 153 NIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR 212
Query: 187 SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE 246
+I + TYN M + A +I+EM+ G + + T+S + SI+ + G +
Sbjct: 213 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRG-IEPNSITYSTIISIWGKVGKLD 271
Query: 247 KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 291
+A ++L + D YQ +I Y + G ++ R+ L+
Sbjct: 272 RAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELK 316
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 137/321 (42%), Gaps = 9/321 (2%)
Query: 65 LRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KN 122
+RD KL + ++ KRG+ T ++ + K + +D + E +
Sbjct: 239 IRDAKLIFNEIR------KRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPD 292
Query: 123 HLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQ 182
TY L++ CKE + AE L ++M++ L + + F +L+ ++ +
Sbjct: 293 VFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYH 352
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
+M + PD YN + L V D++ A ++++EMK G + D T++ L Y +
Sbjct: 353 QMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVG-MKPDKITYTTLIDGYCKE 411
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY 302
G E A K + D A+ LI+ + + G + + R R + A + +Y
Sbjct: 412 GDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATY 471
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+I ++ K KE + + NV++ K+G+++NA L E
Sbjct: 472 TMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLN 531
Query: 363 RGADPNAKTWEIFSDYYLRNG 383
G P+ T+ I + + +NG
Sbjct: 532 LGVTPDDITYNILLEGHCKNG 552
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 123/278 (44%), Gaps = 1/278 (0%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y L+N +CKE A+ + ++++ L +++ FN+L+ K+ + ++ + + M+
Sbjct: 226 YNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTME 285
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
+ I PD +TY+V + L + AE++ +EM++ G + + TF+ L +
Sbjct: 286 ENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRG-LRPNGITFTALIDGQYRSRRM 344
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
+ A ++ DL Y L+ + G++++ ++ +++ I+Y +
Sbjct: 345 DSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTL 404
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
I DL A + K D +I + ++GR+ +AE G
Sbjct: 405 IDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGM 464
Query: 366 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDG 403
P+ T+ + D Y + G++K+ L++ G G
Sbjct: 465 KPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPG 502
>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 110/260 (42%), Gaps = 1/260 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
T+ +L+N CKE ++ L ++M L + + F +L+ K G + Q
Sbjct: 319 FTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQM 378
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M A + PD TYN + L V D+ A R++ EM G + D TF+ L + G
Sbjct: 379 MLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASG-LKPDKITFTTLIDGCCKDG 437
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
E A + + D A+ LI+ + G + + R+ + A + +Y
Sbjct: 438 DMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYT 497
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I D+ K KE +S + N ++ K+G+++NA+ L +
Sbjct: 498 MVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNV 557
Query: 364 GADPNAKTWEIFSDYYLRNG 383
G PN T+ I D + ++G
Sbjct: 558 GVAPNDITYNILLDGHSKHG 577
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/312 (19%), Positives = 129/312 (41%), Gaps = 9/312 (2%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
+ L++ +CK A + +++ + L + + FN+L++ K+G E+ + M+
Sbjct: 251 FNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGVME 310
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
+ + PD +T++ + L + + +EM G V + TF+ L + G
Sbjct: 311 SEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLV-PNGVTFTTLIDGQCKGGKV 369
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
+ A + + + + DL Y LI + G+L E R+ + + I++ +
Sbjct: 370 DLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTL 429
Query: 306 IQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
I D+ A + + E G D+ T +I +EGR+ +A + G
Sbjct: 430 IDGCCKDGDMESALEIKRRMVEEGIELDDVAFT-ALISGLCREGRVHDAGRMLTDMLSAG 488
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 424
P+ T+ + D + + GD+K+ L++ G VP T M ++
Sbjct: 489 FKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGH------VPGVVTYNALMNGLCKQG 542
Query: 425 DVDGAEGFLEIL 436
+ A+ L+ +
Sbjct: 543 QMKNAKMLLDAM 554
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 72/160 (45%), Gaps = 1/160 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+T+ +L++ CK+ E A + +M E + + F +L++ + G ++ +
Sbjct: 424 ITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTD 483
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M ++ PD TY + + D+ ++++EM+ DG V T++ L + + G
Sbjct: 484 MLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPG-VVTYNALMNGLCKQG 542
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 283
+ A+ L + N + Y L+ + + G+ +V
Sbjct: 543 QMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGSSVDV 582
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 137/321 (42%), Gaps = 9/321 (2%)
Query: 65 LRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KN 122
+RD KL + ++ KRG+ T ++ + K + +D + E +
Sbjct: 239 IRDAKLIFNEIR------KRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPD 292
Query: 123 HLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQ 182
TY L++ CKE + AE L ++M++ L + + F +L+ ++ +
Sbjct: 293 VFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYH 352
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
+M + PD YN + L V D++ A ++++EM+ G + D T++ L Y +
Sbjct: 353 QMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVG-MKPDKITYTTLIDGYCKE 411
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY 302
G E A K + D A+ LI+ + + G + + R R + A + +Y
Sbjct: 412 GDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATY 471
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+I ++ K KE + + NV++ K+G+++NA L E
Sbjct: 472 TMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLN 531
Query: 363 RGADPNAKTWEIFSDYYLRNG 383
G P+ T+ I + + +NG
Sbjct: 532 LGVTPDDITYNILLEGHCKNG 552
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 123/278 (44%), Gaps = 1/278 (0%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y L+N +CKE A+ + ++++ L +++ FN+L+ K+ + ++ + + M+
Sbjct: 226 YNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTME 285
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
+ I PD +TY+V + L + AE++ +EM++ G + + TF+ L +
Sbjct: 286 ENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRG-LRPNGITFTALIDGQCRSRRI 344
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
+ A ++ DL Y L+ + G++++ ++ +R+ I+Y +
Sbjct: 345 DSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTL 404
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
I DL A + K D +I + ++GR+ +AE G
Sbjct: 405 IDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGM 464
Query: 366 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDG 403
P+ T+ + D Y + G++K+ L++ G G
Sbjct: 465 KPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPG 502
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 134/324 (41%), Gaps = 10/324 (3%)
Query: 108 AAENYFVDLPETSK-NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMT 166
AA+ Y + S+ N T +++ YCK L +K +A++ +M++ + + N ++
Sbjct: 79 AADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVD 138
Query: 167 LYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA 226
+ G E A++ M + + P TYN ++ L A V +EM G VA
Sbjct: 139 ARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFG-VA 197
Query: 227 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
D +F+ L + G E+A + KE+ +R DL ++ LI L+ + G +
Sbjct: 198 PDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAY 257
Query: 287 WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY-DIRVTNVMIGAYA 345
R +R + Y +I + A + E GC D+ N ++
Sbjct: 258 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEM-VGCGCLPDVVTYNTLLNGLC 316
Query: 346 KEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGK 405
KE RL +AE L R RG P+ T+ Y G + A+ + ++ +
Sbjct: 317 KERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQ------R 370
Query: 406 WVPSSETIRTFMRHFEQEKDVDGA 429
P T T + ++ D+D A
Sbjct: 371 LRPDIVTYNTLIDGMCRQGDLDKA 394
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 122/277 (44%), Gaps = 1/277 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +LLN CKE AE LL +M+E + F +L+ Y G +K +
Sbjct: 306 VTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDT 365
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + PD TYN + + D+ A + ++M + + T+S L + E G
Sbjct: 366 MLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSR-EIFPNHVTYSILIDSHCEKG 424
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
E A L E+ N+ ++ Y +I Y ++GN+S+ + + + + + I+Y
Sbjct: 425 QVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYN 484
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I + + A K E D+ N++I ++ G ++ A + E+ +
Sbjct: 485 TLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAK 544
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 400
G +P+ T+ + ++ G+ K A ++ + G+
Sbjct: 545 GIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGK 581
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 142/335 (42%), Gaps = 7/335 (2%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
++ L+ +C+ E+A + ++M+ + + F+ L+ L+A+ G + A ++EM
Sbjct: 202 SFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREM 261
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ ++PD Y + + +S A RV +EM G D T++ L + +
Sbjct: 262 RCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCG-CLPDVVTYNTLLNGLCKERR 320
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
AE L E+ R DL + LI Y G L + +++ ++ ++Y
Sbjct: 321 LLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNT 380
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+I + DL A + + S + +++I ++ ++G++E+A + +G
Sbjct: 381 LIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKG 440
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 424
PN T+ Y R+G++ L+K + K P T T + + +E
Sbjct: 441 ILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVN------KVSPDLITYNTLIHGYIKED 494
Query: 425 DVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
+ A L +++K V + LI ++ G
Sbjct: 495 KMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHG 529
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 103/215 (47%), Gaps = 3/215 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP--ETSKNHLTYGSLLN 131
AL+L + M + + + +D + + +D A + + D+ E NH+TY L++
Sbjct: 359 ALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILID 418
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C++ E A L++M + + M +NS++ Y ++G+ K +Q+M + + P
Sbjct: 419 SHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSP 478
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D TYN + + + A +++ M+++ +V D T++ L + + G ++A
Sbjct: 479 DLITYNTLIHGYIKEDKMHDAFKLLNMMEKE-KVQPDVVTYNMLINGFSVHGNVQEAGWI 537
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
+++ + D Y +I + GN E +++
Sbjct: 538 FEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQL 572
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 58/328 (17%), Positives = 120/328 (36%), Gaps = 77/328 (23%)
Query: 168 YAKTGHP-----------------------------------EKIPAIIQEMKASSIMPD 192
++ G P +K+ A+I EM+ + PD
Sbjct: 70 LSRAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPD 129
Query: 193 SYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERAL 252
T+NV + A D A +++ M G + T++++ +G+++KA
Sbjct: 130 VVTHNVMVDARFRAGDAEAAMALVDSMVSKG-LKPGIVTYNSVLKGLCRSGMWDKAWEVF 188
Query: 253 KELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNL 312
KE+++ D+ ++ LI + + G + E +I++ +R
Sbjct: 189 KEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMR--------------------- 227
Query: 313 KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
+ K D+ + +IG +A+ G++++A R G P+ +
Sbjct: 228 ------HRGIKP--------DLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIY 273
Query: 373 EIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGF 432
+ + R G M A+ ++ + G +P T T + +E+ + AEG
Sbjct: 274 TMVIGGFCRAGLMSDALRVRDEMVGCG------CLPDVVTYNTLLNGLCKERRLLDAEGL 327
Query: 433 LEILKKAVDDLGVEVFEPLIRTYAAAGR 460
L +++ + F LI Y G+
Sbjct: 328 LNEMRERGVPPDLCTFTTLIHGYCIEGK 355
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
+ S + +TY +L++ Y KE A LL M++ + + +N L+ ++ G+ ++
Sbjct: 475 KVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEA 534
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG---RVAADWTTFSN 234
I ++M A I PD YTY + + A ++ +EM + G R AA F N
Sbjct: 535 GWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGKEKRRAAGTVQFVN 594
Query: 235 L 235
+
Sbjct: 595 I 595
>gi|115475155|ref|NP_001061174.1| Os08g0191900 [Oryza sativa Japonica Group]
gi|40253652|dbj|BAD05595.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623143|dbj|BAF23088.1| Os08g0191900 [Oryza sativa Japonica Group]
gi|125602452|gb|EAZ41777.1| hypothetical protein OsJ_26318 [Oryza sativa Japonica Group]
gi|215695295|dbj|BAG90486.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704436|dbj|BAG93870.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 609
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 136/316 (43%), Gaps = 13/316 (4%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL----PETSKNHLTYGSLLNCYCKE 136
M K+G +V Q ++ + + AE F + PE S +TY +L + +
Sbjct: 168 MNKKGYKPSVISQTALMEAYGRAKQYRKAEAVFRRMQTSGPEPSA--VTYQIILKSFVEG 225
Query: 137 LMTEKAEALLEKM---KELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDS 193
++AEA+ E + K + F+ ++ +Y K G + + +M I +
Sbjct: 226 DKYKEAEAIFEDLLNEKRASFKPDQKMFHMMIYMYKKAGDYAQARKLFAQMSERGIPLST 285
Query: 194 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 253
T+N M ++S + ++M+R + D ++S L Y +A E+A +
Sbjct: 286 VTFNSLMSFETNYKEVSS---IYDQMQRTA-LKPDVVSYSLLIKAYGKARREEEALAVFE 341
Query: 254 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLK 313
E+ + +Y LI + +G + E + +++++R SY M+ VN
Sbjct: 342 EMLDAGVRPTRKSYNILIDAFAISGLVEEAHTVFKAMRRHRVEPDLCSYTTMVLAYVNAS 401
Query: 314 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 373
D+ GAEK F+ + ++ V ++ Y+K +E + ER R +G +PN +
Sbjct: 402 DMDGAEKFFRRIKEDGLKPNVVVYGTLMKGYSKLNNVERVMRVYERMRMQGVEPNQTIYT 461
Query: 374 IFSDYYLRNGDMKLAV 389
D + RN D AV
Sbjct: 462 TIMDVHGRNSDFGNAV 477
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 109/250 (43%), Gaps = 5/250 (2%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+T+ SL++ E ++ ++ ++M+ L + ++ L+ Y K E+ A+ +E
Sbjct: 286 VTFNSLMSF---ETNYKEVSSIYDQMQRTALKPDVVSYSLLIKAYGKARREEEALAVFEE 342
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + + P +YN+ + A A + A V + M+R RV D +++ + YV A
Sbjct: 343 MLDAGVRPTRKSYNILIDAFAISGLVEEAHTVFKAMRRH-RVEPDLCSYTTMVLAYVNAS 401
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
+ AE+ + ++ ++ Y L+ Y + N+ V R++ +R+ Y
Sbjct: 402 DMDGAEKFFRRIKEDGLKPNVVVYGTLMKGYSKLNNVERVMRVYERMRMQGVEPNQTIYT 461
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER-ARR 362
++ V D A FKE E+ D + N+++ E A EL A +
Sbjct: 462 TIMDVHGRNSDFGNAVIWFKEMEARGYPADKKAKNILLSLAKTPEEQEEANELTGNCAIQ 521
Query: 363 RGADPNAKTW 372
A P+ T+
Sbjct: 522 LEAKPDGTTY 531
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 139/328 (42%), Gaps = 15/328 (4%)
Query: 156 FSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERV 215
FS M F L+T Y K G + +++ M P + M A AE V
Sbjct: 140 FSEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYKPSVISQTALMEAYGRAKQYRKAEAV 199
Query: 216 IEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL--ENRNAHR-DLSAYQFLIT 272
M+ G + T+ + +VE +++AE ++L E R + + D + +I
Sbjct: 200 FRRMQTSGPEPSA-VTYQIILKSFVEGDKYKEAEAIFEDLLNEKRASFKPDQKMFHMMIY 258
Query: 273 LYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY 332
+Y + G+ ++ +++ + + +++ +++ N K++ + + +
Sbjct: 259 MYKKAGDYAQARKLFAQMSERGIPLSTVTFNSLMSFETNYKEVSS---IYDQMQRTALKP 315
Query: 333 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 392
D+ +++I AY K R E A + E G P K++ I D + +G ++ A
Sbjct: 316 DVVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILIDAFAISGLVEEAHTVF 375
Query: 393 EKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLI 452
KA+ R + P + T + + D+DGAE F +K+ V V+ L+
Sbjct: 376 -KAMRRHRVE-----PDLCSYTTMVLAYVNASDMDGAEKFFRRIKEDGLKPNVVVYGTLM 429
Query: 453 RTYAAAGRTSPVM--LRRLKMEKVEVSE 478
+ Y+ VM R++M+ VE ++
Sbjct: 430 KGYSKLNNVERVMRVYERMRMQGVEPNQ 457
Score = 38.5 bits (88), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 62/144 (43%), Gaps = 8/144 (5%)
Query: 229 WTTFSN-----LASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 283
W FS L + Y + G F +AER LK + + + + L+ YG+ +
Sbjct: 137 WWNFSEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYKPSVISQTALMEAYGRAKQYRKA 196
Query: 284 YRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW---ESGCATYDIRVTNVM 340
++R ++ + P + ++Y +++ V AE F++ + D ++ ++M
Sbjct: 197 EAVFRRMQTSGPEPSAVTYQIILKSFVEGDKYKEAEAIFEDLLNEKRASFKPDQKMFHMM 256
Query: 341 IGAYAKEGRLENAEELKERARRRG 364
I Y K G A +L + RG
Sbjct: 257 IYMYKKAGDYAQARKLFAQMSERG 280
>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/361 (20%), Positives = 148/361 (40%), Gaps = 14/361 (3%)
Query: 69 KLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTY 126
K Y + L + ME RG+ V +I ++ + +D + F + + + +
Sbjct: 54 KKYETVVSLFKEMEFRGIKYNVCTLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIF 113
Query: 127 GSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKA 186
+L++ C+ TE A LL++M + + NSLM Y G +K+ I M +
Sbjct: 114 TTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVS 173
Query: 187 SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE 246
+ PD Y+Y++++ V I A + +EM G V + T++ L +A
Sbjct: 174 KGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRG-VVPNAVTYNTLIKALCQALRPR 232
Query: 247 KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLN 304
A+ +++ D+ AY L+ + + GNL E+ +++ + RL P+ + Y
Sbjct: 233 DAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDL--VVYTI 290
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+I + + + A++ D+ ++ +EG + A L + G
Sbjct: 291 IINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDG 350
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 424
P + ++ + L++ D V + + D G + RTF++ F
Sbjct: 351 CMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRG-------FYADAVTRTFLKDFLPGN 403
Query: 425 D 425
D
Sbjct: 404 D 404
>gi|449457361|ref|XP_004146417.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Cucumis sativus]
Length = 858
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 121/270 (44%), Gaps = 4/270 (1%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
+Y SL+ M A A L+KM+ L +P++ +++ ++K GH E + +EM
Sbjct: 561 SYSSLIQILTGADMPAMALAYLKKMQSAGLVSDCIPYSVVISSFSKLGHLEMADKLYREM 620
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ PD Y V + A A + A + MKRDG ++ + +++L +Y + G
Sbjct: 621 VKHGVQPDIIVYGVLINAFADAGSVKEAINYVNAMKRDG-LSGNTVIYNSLIKLYTKVGY 679
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN-ISYL 303
++A A K LE + + + +I LY + + E I+ SL+ AN ++
Sbjct: 680 LKEAHEAYKMLEQTDDGPAIYSSNCMIDLYSERSMVKEAEEIFESLKKK--GEANEFTFA 737
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
M+ + + + A ++ + D+ N MI YA +GR + A + + +
Sbjct: 738 MMLCMYKKIGRIQEAICVARQMKEQGLLSDLLSFNNMISLYAMDGRFKEAVSIFQEMMKA 797
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
P+ T++ L+ G K AV LE
Sbjct: 798 AVQPDECTYKSLGVVLLKCGVSKQAVSKLE 827
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 147/348 (42%), Gaps = 19/348 (5%)
Query: 117 PETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK 176
P S + TY +L++ Y K ++A E M + + +++ FN+++ + G ++
Sbjct: 310 PHVSLSTYTYNTLIDTYGKAGQLKEASTTFENMLKEGVSPTTVTFNTMIHICGNHGQLKE 369
Query: 177 IPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLA 236
+ ++Q+M+ PD+ TYN+ + A ++I A EM+ G + D ++ L
Sbjct: 370 VTFLMQKMEELQCPPDTRTYNILISLYAKHDNIDLASNYFAEMEEAG-LQPDIVSYRTLL 428
Query: 237 SIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPN 296
Y + +AE+ + E++ R D L +Y G L E + + LA +
Sbjct: 429 YAYSIRHMVAEAEKLITEMDERGLEIDEFTQSALTRMYIDAGMLEESWSWFWRFHLA-GH 487
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFK--EWESGCATYDIRVTNVMIGAYAKEGRLENAE 354
++ Y I + AE+ F + E C + NVMI AY A+
Sbjct: 488 MSSECYSANIDAYGERGFILEAERVFVSCQEEKKCTVLEF---NVMIKAYGVVKDYAKAQ 544
Query: 355 ELKERARRRGADPNAKTWEIFSDYYLRNGDMK-LAVDCLEKAIDTGRGDGGKWVPSSETI 413
++ + + G P+ ++ L DM +A+ L+K G +P S I
Sbjct: 545 KIFDSMKSNGVVPDKCSYSSLIQ-ILTGADMPAMALAYLKKMQSAGLVS--DCIPYSVVI 601
Query: 414 RTFMR--HFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
+F + H E + + E++K V + V+ LI +A AG
Sbjct: 602 SSFSKLGHLEMADKL-----YREMVKHGVQP-DIIVYGVLINAFADAG 643
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 81/383 (21%), Positives = 139/383 (36%), Gaps = 85/383 (22%)
Query: 95 IHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKEL 152
I + L AK ID A NYF ++ E + ++Y +LL Y M +AE L+ +M E
Sbjct: 391 ILISLYAKHDNIDLASNYFAEMEEAGLQPDIVSYRTLLYAYSIRHMVAEAEKLITEMDER 450
Query: 153 NLGFSSMPFNSLMTLYAKTG-------------------------------------HPE 175
L ++L +Y G E
Sbjct: 451 GLEIDEFTQSALTRMYIDAGMLEESWSWFWRFHLAGHMSSECYSANIDAYGERGFILEAE 510
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
++ QE K +++ +NV ++A V D + A+++ + MK +G V D ++S+L
Sbjct: 511 RVFVSCQEEKKCTVL----EFNVMIKAYGVVKDYAKAQKIFDSMKSNG-VVPDKCSYSSL 565
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
I A + A LK++++ D Y +I+ + + G+L
Sbjct: 566 IQILTGADMPAMALAYLKKMQSAGLVSDCIPYSVVISSFSKLGHLEM------------- 612
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEE 355
A+K ++E DI V V+I A+A G ++ A
Sbjct: 613 ----------------------ADKLYREMVKHGVQPDIIVYGVLINAFADAGSVKEAIN 650
Query: 356 LKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRT 415
+R G N + Y + G +K A + + T G P+ +
Sbjct: 651 YVNAMKRDGLSGNTVIYNSLIKLYTKVGYLKEAHEAYKMLEQTDDG------PAIYSSNC 704
Query: 416 FMRHFEQEKDVDGAEGFLEILKK 438
+ + + V AE E LKK
Sbjct: 705 MIDLYSERSMVKEAEEIFESLKK 727
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/242 (19%), Positives = 115/242 (47%), Gaps = 6/242 (2%)
Query: 73 PALKLS--ENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGS 128
PA+ L+ + M+ G+ ++ + +K+ ++ A+ + ++ + + + YG
Sbjct: 575 PAMALAYLKKMQSAGLVSDCIPYSVVISSFSKLGHLEMADKLYREMVKHGVQPDIIVYGV 634
Query: 129 LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS 188
L+N + ++A + MK L +++ +NSL+ LY K G+ ++ + ++ +
Sbjct: 635 LINAFADAGSVKEAINYVNAMKRDGLSGNTVIYNSLIKLYTKVGYLKEAHEAYKMLEQTD 694
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
P Y+ N + + + + AE + E +K+ G A+ TF+ + +Y + G ++A
Sbjct: 695 DGPAIYSSNCMIDLYSERSMVKEAEEIFESLKKKGE--ANEFTFAMMLCMYKKIGRIQEA 752
Query: 249 ERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQV 308
++++ + DL ++ +I+LY G E I++ + A +Y ++ V
Sbjct: 753 ICVARQMKEQGLLSDLLSFNNMISLYAMDGRFKEAVSIFQEMMKAAVQPDECTYKSLGVV 812
Query: 309 LV 310
L+
Sbjct: 813 LL 814
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 93/249 (37%), Gaps = 15/249 (6%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N + Y +L K E+L +M + + + + +L+ +Y+K G E+ +
Sbjct: 185 NVIHYNIVLGTLGKAQKWRLVESLWVEMNKKGIKPINSTYGTLIDVYSKGGFKEEALVWL 244
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+ M + PD T + ++ + AE ++ + + T AS+ VE
Sbjct: 245 ERMNEQGMEPDEVTMGIVVQLYKKAGEFQKAESFFKKWSSCNSMKYEITNKKKAASVKVE 304
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQF--LITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
+ L H LS Y + LI YG+ G L E + ++ +
Sbjct: 305 SSL-------------HPPHVSLSTYTYNTLIDTYGKAGQLKEASTTFENMLKEGVSPTT 351
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+++ MI + N L ++ E D R N++I YAK ++ A
Sbjct: 352 VTFNTMIHICGNHGQLKEVTFLMQKMEELQCPPDTRTYNILISLYAKHDNIDLASNYFAE 411
Query: 360 ARRRGADPN 368
G P+
Sbjct: 412 MEEAGLQPD 420
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 7/135 (5%)
Query: 69 KLYYPALKLSENMEKRGMNKTVSD-QAIH-----LDLVAKVQGIDAAENYFVDLPETSK- 121
KLY L E E M + D AI+ +DL ++ + AE F L + +
Sbjct: 672 KLYTKVGYLKEAHEAYKMLEQTDDGPAIYSSNCMIDLYSERSMVKEAEEIFESLKKKGEA 731
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N T+ +L Y K ++A + +MKE L + FN++++LYA G ++ +I
Sbjct: 732 NEFTFAMMLCMYKKIGRIQEAICVARQMKEQGLLSDLLSFNNMISLYAMDGRFKEAVSIF 791
Query: 182 QEMKASSIMPDSYTY 196
QEM +++ PD TY
Sbjct: 792 QEMMKAAVQPDECTY 806
>gi|125560423|gb|EAZ05871.1| hypothetical protein OsI_28108 [Oryza sativa Indica Group]
Length = 608
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 136/316 (43%), Gaps = 13/316 (4%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL----PETSKNHLTYGSLLNCYCKE 136
M K+G +V Q ++ + + AE F + PE S +TY +L + +
Sbjct: 168 MNKKGYKPSVISQTALMEAYGRAKQYRKAEAVFRRMQTSGPEPSA--VTYQIILKSFVEG 225
Query: 137 LMTEKAEALLEKM---KELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDS 193
++AEA+ E + K + F+ ++ +Y K G + + +M I +
Sbjct: 226 DKYKEAEAIFEDLLNEKRASFKPDQKMFHMMIYMYKKAGDYAQARKLFAQMSERGIPLST 285
Query: 194 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 253
T+N M ++S + ++M+R + D ++S L Y +A E+A +
Sbjct: 286 VTFNSLMSFETDYKEVSN---IYDQMQRTA-LKPDVVSYSLLIKAYGKARREEEALAVFE 341
Query: 254 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLK 313
E+ + +Y LI + +G + E + +++++R SY M+ VN
Sbjct: 342 EMLDAGVRPTRKSYNILIDAFAISGLVEEAHTVFKAMRRHRVEPDLCSYTTMVLAYVNAS 401
Query: 314 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 373
D+ GAEK F+ + ++ V ++ Y+K +E + ER R +G +PN +
Sbjct: 402 DMDGAEKFFRRIKEDGLKPNVVVYGTLMKGYSKLNNVERVMRVYERMRMQGVEPNQTIYT 461
Query: 374 IFSDYYLRNGDMKLAV 389
D + RN D AV
Sbjct: 462 TIMDVHGRNSDFGNAV 477
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 108/250 (43%), Gaps = 5/250 (2%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+T+ SL++ E ++ + ++M+ L + ++ L+ Y K E+ A+ +E
Sbjct: 286 VTFNSLMSF---ETDYKEVSNIYDQMQRTALKPDVVSYSLLIKAYGKARREEEALAVFEE 342
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + + P +YN+ + A A + A V + M+R RV D +++ + YV A
Sbjct: 343 MLDAGVRPTRKSYNILIDAFAISGLVEEAHTVFKAMRRH-RVEPDLCSYTTMVLAYVNAS 401
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
+ AE+ + ++ ++ Y L+ Y + N+ V R++ +R+ Y
Sbjct: 402 DMDGAEKFFRRIKEDGLKPNVVVYGTLMKGYSKLNNVERVMRVYERMRMQGVEPNQTIYT 461
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER-ARR 362
++ V D A FKE E+ D + N+++ E A EL A +
Sbjct: 462 TIMDVHGRNSDFGNAVIWFKEMEARGYPADKKAKNILLSLAKTPEEQEEANELTGNCAIQ 521
Query: 363 RGADPNAKTW 372
A P+ T+
Sbjct: 522 LEAKPDGTTY 531
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 139/328 (42%), Gaps = 15/328 (4%)
Query: 156 FSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERV 215
FS M F L+T Y K G + +++ M P + M A AE V
Sbjct: 140 FSEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYKPSVISQTALMEAYGRAKQYRKAEAV 199
Query: 216 IEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL--ENRNAHR-DLSAYQFLIT 272
M+ G + T+ + +VE +++AE ++L E R + + D + +I
Sbjct: 200 FRRMQTSGPEPSA-VTYQIILKSFVEGDKYKEAEAIFEDLLNEKRASFKPDQKMFHMMIY 258
Query: 273 LYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY 332
+Y + G+ ++ +++ + + +++ +++ + K++ + + +
Sbjct: 259 MYKKAGDYAQARKLFAQMSERGIPLSTVTFNSLMSFETDYKEVSN---IYDQMQRTALKP 315
Query: 333 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 392
D+ +++I AY K R E A + E G P K++ I D + +G ++ A
Sbjct: 316 DVVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILIDAFAISGLVEEAHTVF 375
Query: 393 EKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLI 452
KA+ R + P + T + + D+DGAE F +K+ V V+ L+
Sbjct: 376 -KAMRRHRVE-----PDLCSYTTMVLAYVNASDMDGAEKFFRRIKEDGLKPNVVVYGTLM 429
Query: 453 RTYAAAGRTSPVM--LRRLKMEKVEVSE 478
+ Y+ VM R++M+ VE ++
Sbjct: 430 KGYSKLNNVERVMRVYERMRMQGVEPNQ 457
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 62/144 (43%), Gaps = 8/144 (5%)
Query: 229 WTTFSN-----LASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 283
W FS L + Y + G F +AER LK + + + + L+ YG+ +
Sbjct: 137 WWNFSEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYKPSVISQTALMEAYGRAKQYRKA 196
Query: 284 YRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW---ESGCATYDIRVTNVM 340
++R ++ + P + ++Y +++ V AE F++ + D ++ ++M
Sbjct: 197 EAVFRRMQTSGPEPSAVTYQIILKSFVEGDKYKEAEAIFEDLLNEKRASFKPDQKMFHMM 256
Query: 341 IGAYAKEGRLENAEELKERARRRG 364
I Y K G A +L + RG
Sbjct: 257 IYMYKKAGDYAQARKLFAQMSERG 280
>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 874
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 128/301 (42%), Gaps = 5/301 (1%)
Query: 106 IDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNS 163
+DAA F ++PE N T+G L+ YCK +T+K LL M+ + + + +N+
Sbjct: 163 VDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNT 222
Query: 164 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRD- 222
+++ + + G + ++++M+ ++PD T+N + AL + A R+ +M+ D
Sbjct: 223 IVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDE 282
Query: 223 --GRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
G + T++ + + + GL E A+ + + + L +Y + + G
Sbjct: 283 YLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKF 342
Query: 281 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 340
E + + + + SY ++ L L L A+ + D +
Sbjct: 343 IEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCL 402
Query: 341 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 400
+ Y G+++ A+ L + R PNA T I + G + A + L K + G
Sbjct: 403 LHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGY 462
Query: 401 G 401
G
Sbjct: 463 G 463
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/349 (19%), Positives = 142/349 (40%), Gaps = 27/349 (7%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE---TSKNHLTYGSLLNCYCKEL 137
M +G+ ++ I +D + K+ G+ + V L + + +TYG LL+ YC
Sbjct: 352 MTDKGIGPSIYSYNILMDGLCKL-GMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVG 410
Query: 138 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 197
+ A++LL++M N ++ N L+ K G + ++++M D+ T N
Sbjct: 411 KVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCN 470
Query: 198 VWMRALAAVNDISGAERVIEEMKRDGRVA----------------------ADWTTFSNL 235
+ + L ++ A +++ M+ G A D T+S L
Sbjct: 471 IIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTL 530
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
+ +AG F +A+ E+ D AY I + + G +S +R+ + +
Sbjct: 531 LNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGC 590
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEE 355
+ + +Y ++I L + E + + +I N I + ++E+A
Sbjct: 591 HKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATN 650
Query: 356 LKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID-TGRGDG 403
L + ++ PN +++ + + + D +A + E A+ G+ +G
Sbjct: 651 LLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEG 699
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 114/277 (41%), Gaps = 7/277 (2%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
T+ L+ C + A L ++M E + F L+ Y K G +K ++ M
Sbjct: 149 TFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAM 208
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
++ ++P+ YN + + +E+++E+M+ +G V D TF++ S + G
Sbjct: 209 ESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLV-PDIVTFNSRISALCKEGK 267
Query: 245 FEKAERALKELENRNAHRDLS-----AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
A R ++E + + L Y ++ + + G L + ++ S+R +
Sbjct: 268 VLDASRIFSDME-LDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASL 326
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
SY +Q LV AE K+ I N+++ K G L +A+ +
Sbjct: 327 QSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGL 386
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 396
+R G P+A T+ Y G + A L++ +
Sbjct: 387 MKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMM 423
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/305 (20%), Positives = 126/305 (41%), Gaps = 11/305 (3%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
+N L+ K E + + ++M I P +YT+N+ +RAL + + A + +EM
Sbjct: 115 YNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMP 174
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
G ++ TF L Y +AGL +K L +E+ + Y +++ + + G
Sbjct: 175 EKGCKPNEF-TFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRN 233
Query: 281 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE----SGCATYDIRV 336
+ ++ +R +++ + I L + A + F + E G +
Sbjct: 234 DDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSIT 293
Query: 337 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 396
N+M+ + K G LE+A+ L E R + +++ I+ +R+G A L++
Sbjct: 294 YNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMT 353
Query: 397 DTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYA 456
D G G PS + M + + A+ + ++K+ + L+ Y
Sbjct: 354 DKGIG------PSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYC 407
Query: 457 AAGRT 461
+ G+
Sbjct: 408 SVGKV 412
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/368 (18%), Positives = 138/368 (37%), Gaps = 19/368 (5%)
Query: 75 LKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF----VDLPETSKNHLTYGSLL 130
L LS +++K ++ +S +I AK ID A F PE + Y LL
Sbjct: 64 LILSSSIQKTKLSSLLSVVSI----FAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLL 119
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
KE E L + M + + FN L+ + + + EM
Sbjct: 120 ESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCK 179
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
P+ +T+ + +R ++ M+ G V + ++ + S + G + +E+
Sbjct: 180 PNEFTFGILVRGYCKAGLTDKGLELLNAMESFG-VLPNKVIYNTIVSSFCREGRNDDSEK 238
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR----LAFPNTANISYLNMI 306
++++ D+ + I+ + G + + RI+ + L P +I+Y M+
Sbjct: 239 MVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLML 298
Query: 307 QVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD 366
+ + L A+ F+ ++ N+ + + G+ AE + ++ +G
Sbjct: 299 KGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIG 358
Query: 367 PNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDV 426
P+ ++ I D G KL + K I G P + T + + V
Sbjct: 359 PSIYSYNILMD-----GLCKLGMLSDAKTI-VGLMKRNGVCPDAVTYGCLLHGYCSVGKV 412
Query: 427 DGAEGFLE 434
D A+ L+
Sbjct: 413 DAAKSLLQ 420
>gi|449518091|ref|XP_004166077.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g23020-like [Cucumis sativus]
Length = 859
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 121/270 (44%), Gaps = 4/270 (1%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
+Y SL+ M A A L+KM+ L +P++ +++ ++K GH E + +EM
Sbjct: 562 SYSSLIQILTGADMPAMALAYLKKMQSAGLVSDCIPYSVVISSFSKLGHLEMADKLYREM 621
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ PD Y V + A A + A + MKRDG ++ + +++L +Y + G
Sbjct: 622 VKHGVQPDIIVYGVLINAFADAGSVKEAINYVNAMKRDG-LSGNTVIYNSLIKLYTKVGY 680
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN-ISYL 303
++A A K LE + + + +I LY + + E I+ SL+ AN ++
Sbjct: 681 LKEAHEAYKMLEQTDDGPAIYSSNCMIDLYSERSMVKEAEEIFESLKKK--GEANEFTFA 738
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
M+ + + + A ++ + D+ N MI YA +GR + A + + +
Sbjct: 739 MMLCMYKKIGRIQEAICVARQMKEQGLLSDLLSFNNMISLYAMDGRFKEAVSIFQEMMKA 798
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
P+ T++ L+ G K AV LE
Sbjct: 799 AVQPDECTYKSLGVVLLKCGVSKQAVSKLE 828
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 147/348 (42%), Gaps = 19/348 (5%)
Query: 117 PETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK 176
P S + TY +L++ Y K ++A E M + + +++ FN+++ + G ++
Sbjct: 311 PHVSLSTYTYNTLIDTYGKAGQLKEASTTFENMLKEGVSPTTVTFNTMIHICGNHGQLKE 370
Query: 177 IPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLA 236
+ ++Q+M+ PD+ TYN+ + A ++I A EM+ G + D ++ L
Sbjct: 371 VTFLMQKMEELQCPPDTRTYNILISLYAKHDNIDLASNYFAEMEEAG-LQPDIVSYRTLL 429
Query: 237 SIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPN 296
Y + +AE+ + E++ R D L +Y G L E + + LA +
Sbjct: 430 YAYSIRHMVAEAEKLITEMDERGLEIDEFTQSALTRMYIDAGMLEESWSWFWRFHLA-GH 488
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFK--EWESGCATYDIRVTNVMIGAYAKEGRLENAE 354
++ Y I + AE+ F + E C + NVMI AY A+
Sbjct: 489 MSSECYSANIDAYGERGFILEAERVFVSCQEEKKCTVLEF---NVMIKAYGVVKDYAKAQ 545
Query: 355 ELKERARRRGADPNAKTWEIFSDYYLRNGDMK-LAVDCLEKAIDTGRGDGGKWVPSSETI 413
++ + + G P+ ++ L DM +A+ L+K G +P S I
Sbjct: 546 KIFDSMKSNGVVPDKCSYSSLIQ-ILTGADMPAMALAYLKKMQSAGLVS--DCIPYSVVI 602
Query: 414 RTFMR--HFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
+F + H E + + E++K V + V+ LI +A AG
Sbjct: 603 SSFSKLGHLEMADKL-----YREMVKHGVQP-DIIVYGVLINAFADAG 644
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/347 (20%), Positives = 131/347 (37%), Gaps = 44/347 (12%)
Query: 95 IHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKEL 152
I + L AK ID A NYF ++ E + ++Y +LL Y M +AE L+ +M E
Sbjct: 392 ILISLYAKHDNIDLASNYFAEMEEAGLQPDIVSYRTLLYAYSIRHMVAEAEKLITEMDER 451
Query: 153 NLGFSSMPFNSLMTLYAKTG-------------------------------------HPE 175
L ++L +Y G E
Sbjct: 452 GLEIDEFTQSALTRMYIDAGMLEESWSWFWRFHLAGHMSSECYSANIDAYGERGFILEAE 511
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
++ QE K +++ +NV ++A V D + A+++ + MK +G V D ++S+L
Sbjct: 512 RVFVSCQEEKKCTVL----EFNVMIKAYGVVKDYAKAQKIFDSMKSNG-VVPDKCSYSSL 566
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
I A + A LK++++ D Y +I+ + + G+L +++R +
Sbjct: 567 IQILTGADMPAMALAYLKKMQSAGLVSDCIPYSVVISSFSKLGHLEMADKLYREMVKHGV 626
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEE 355
I Y +I + + A + + + + N +I Y K G L+ A E
Sbjct: 627 QPDIIVYGVLINAFADAGSVKEAINYVNAMKRDGLSGNTVIYNSLIKLYTKVGYLKEAHE 686
Query: 356 LKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGD 402
+ + P + D Y +K A + E G +
Sbjct: 687 AYKMLEQTDDGPAIYSSNCMIDLYSERSMVKEAEEIFESLKKKGEAN 733
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/242 (19%), Positives = 115/242 (47%), Gaps = 6/242 (2%)
Query: 73 PALKLS--ENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGS 128
PA+ L+ + M+ G+ ++ + +K+ ++ A+ + ++ + + + YG
Sbjct: 576 PAMALAYLKKMQSAGLVSDCIPYSVVISSFSKLGHLEMADKLYREMVKHGVQPDIIVYGV 635
Query: 129 LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS 188
L+N + ++A + MK L +++ +NSL+ LY K G+ ++ + ++ +
Sbjct: 636 LINAFADAGSVKEAINYVNAMKRDGLSGNTVIYNSLIKLYTKVGYLKEAHEAYKMLEQTD 695
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
P Y+ N + + + + AE + E +K+ G A+ TF+ + +Y + G ++A
Sbjct: 696 DGPAIYSSNCMIDLYSERSMVKEAEEIFESLKKKGE--ANEFTFAMMLCMYKKIGRIQEA 753
Query: 249 ERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQV 308
++++ + DL ++ +I+LY G E I++ + A +Y ++ V
Sbjct: 754 ICVARQMKEQGLLSDLLSFNNMISLYAMDGRFKEAVSIFQEMMKAAVQPDECTYKSLGVV 813
Query: 309 LV 310
L+
Sbjct: 814 LL 815
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 93/249 (37%), Gaps = 15/249 (6%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N + Y +L K E+L +M + + + + +L+ +Y+K G E+ +
Sbjct: 186 NVIHYNIVLGTLGKAQKWRLVESLWVEMNKKGIKPINSTYGTLIDVYSKGGFKEEALVWL 245
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+ M + PD T + ++ + AE ++ + + T AS+ VE
Sbjct: 246 ERMNEQGMEPDEVTMGIVVQLYKKAGEFQKAESFFKKWSSCNSMKYEITNKKKAASVKVE 305
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQF--LITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
+ L H LS Y + LI YG+ G L E + ++ +
Sbjct: 306 SSL-------------HPPHVSLSTYTYNTLIDTYGKAGQLKEASTTFENMLKEGVSPTT 352
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+++ MI + N L ++ E D R N++I YAK ++ A
Sbjct: 353 VTFNTMIHICGNHGQLKEVTFLMQKMEELQCPPDTRTYNILISLYAKHDNIDLASNYFAE 412
Query: 360 ARRRGADPN 368
G P+
Sbjct: 413 MEEAGLQPD 421
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 7/135 (5%)
Query: 69 KLYYPALKLSENMEKRGMNKTVSD-QAIH-----LDLVAKVQGIDAAENYFVDLPETSK- 121
KLY L E E M + D AI+ +DL ++ + AE F L + +
Sbjct: 673 KLYTKVGYLKEAHEAYKMLEQTDDGPAIYSSNCMIDLYSERSMVKEAEEIFESLKKKGEA 732
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N T+ +L Y K ++A + +MKE L + FN++++LYA G ++ +I
Sbjct: 733 NEFTFAMMLCMYKKIGRIQEAICVARQMKEQGLLSDLLSFNNMISLYAMDGRFKEAVSIF 792
Query: 182 QEMKASSIMPDSYTY 196
QEM +++ PD TY
Sbjct: 793 QEMMKAAVQPDECTY 807
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 111/273 (40%), Gaps = 1/273 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +Y L++ + +A + +M L S +++LM K E + ++
Sbjct: 191 NAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLL 250
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+EM+ + P+ YT+ + +R L I A + M +G D T++ L
Sbjct: 251 KEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEG-CGPDLVTYTVLIDALCN 309
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
AG E A+ +++ D Y L+ + G+L W + ++
Sbjct: 310 AGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVT 369
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
+ ++ VL +D A F ++ N +I + GR+E+A +L
Sbjct: 370 FTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTME 429
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
G P A T+ IF DY+ ++G+ AV+ EK
Sbjct: 430 SVGVQPTAYTYNIFIDYFGKSGETGKAVETFEK 462
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 109/250 (43%), Gaps = 13/250 (5%)
Query: 131 NCYCKELM----TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKA 186
NC EL+ TEKA L + MK + + FN L+ ++ K+G ++ + +EM +
Sbjct: 792 NCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMIS 851
Query: 187 SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADW----TTFSNLASIYVEA 242
PD+ TYN+ + +LA N++ A ++ V++D+ T+ L +
Sbjct: 852 RRCKPDAITYNIVISSLAKSNNLDKALDFFYDL-----VSSDFRPTPRTYGPLIDGLAKV 906
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY 302
G E+A R +E+ + + + + LI YG+ G+ ++++ + SY
Sbjct: 907 GRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSY 966
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
++ L + A F E +S D N +I K R+E A L R
Sbjct: 967 TILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRN 1026
Query: 363 RGADPNAKTW 372
RG P+ T+
Sbjct: 1027 RGIVPDLYTY 1036
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 72/356 (20%), Positives = 144/356 (40%), Gaps = 16/356 (4%)
Query: 92 DQAIHLDLVAKVQG---IDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALL 146
DQ I++ L+ K +D + ++ + + +T+ L++ CK ++A A
Sbjct: 331 DQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATF 390
Query: 147 EKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV 206
+ M++ + + +N+L+ + G E ++ M++ + P +YTYN+++
Sbjct: 391 DVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKS 450
Query: 207 NDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSA 266
+ A E+MK G V ++L S+ E G +A+ L D
Sbjct: 451 GETGKAVETFEKMKAKGIVPNIVACNASLYSL-AEMGRLREAKTMFNGLRENGLAPDSVT 509
Query: 267 YQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE 326
Y ++ Y + G + E + + I ++I L + A + F +
Sbjct: 510 YNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMK 569
Query: 327 SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 386
+ + N ++ KEGR++ A EL E + PN ++ D + +N +++
Sbjct: 570 DMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVE 629
Query: 387 LAVDCLEK--AIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 440
LA+ K +D P T T + +E V+ A F LKK++
Sbjct: 630 LALKMFSKMTVMDCK--------PDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSM 677
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 3/201 (1%)
Query: 95 IHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKEL 152
I + +AK +D A ++F DL + TYG L++ K E+A L E+M +
Sbjct: 863 IVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDY 922
Query: 153 NLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA 212
+ FN L+ Y K G E + + M I PD +Y + + L + A
Sbjct: 923 GCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEA 982
Query: 213 ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLIT 272
E+K G + D+ ++ + + ++ E+A E+ NR DL Y L+
Sbjct: 983 LYYFNELKSTG-LDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLML 1041
Query: 273 LYGQTGNLSEVYRIWRSLRLA 293
G G + + R++ L+LA
Sbjct: 1042 NLGLAGMVEQAKRMYEELQLA 1062
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 85/190 (44%), Gaps = 4/190 (2%)
Query: 212 AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 271
A ++ ++ + ++ +++ L +E EKA K+++N D + L+
Sbjct: 771 AYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLL 830
Query: 272 TLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGC 329
++G++G ++E++ +++ + R P+ I+Y +I L +L A F + S
Sbjct: 831 AVHGKSGKITELFELYKEMISRRCKPDA--ITYNIVISSLAKSNNLDKALDFFYDLVSSD 888
Query: 330 ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 389
R +I AK GRLE A L E G PN + I + Y + GD + A
Sbjct: 889 FRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETAC 948
Query: 390 DCLEKAIDTG 399
++ ++ G
Sbjct: 949 QLFKRMVNEG 958
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 86/194 (44%), Gaps = 3/194 (1%)
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
K I P +YN + L V+ A + ++MK G A D TF+ L +++ ++G
Sbjct: 780 KKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVG-CAPDAFTFNMLLAVHGKSGK 838
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+ KE+ +R D Y +I+ ++ NL + + L + +Y
Sbjct: 839 ITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGP 898
Query: 305 MIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I L + L A + F+E + GC + + N++I Y K G E A +L +R
Sbjct: 899 LIDGLAKVGRLEEAMRLFEEMSDYGCKP-NCAIFNILINGYGKIGDTETACQLFKRMVNE 957
Query: 364 GADPNAKTWEIFSD 377
G P+ K++ I D
Sbjct: 958 GIRPDLKSYTILVD 971
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 2/152 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
A +L + M G+ + I +D + +D A YF +L T + + Y ++N
Sbjct: 947 ACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIIN 1006
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
K E+A AL +M+ + +NSLM G E+ + +E++ + + P
Sbjct: 1007 GLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEP 1066
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
D +TYN +R + + A V + M DG
Sbjct: 1067 DVFTYNALIRGYSLSENPEHAYTVYKNMMVDG 1098
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 81/186 (43%), Gaps = 6/186 (3%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP-ETSKNHL-TYGSLLN 131
A++L E M G + I ++ K+ + A F + E + L +Y L++
Sbjct: 912 AMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVD 971
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C C ++A ++K L + +N ++ K+ E+ A+ EM+ I+P
Sbjct: 972 CLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVP 1031
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D YTYN M L + A+R+ EE++ G + D T++ L Y L E E A
Sbjct: 1032 DLYTYNSLMLNLGLAGMVEQAKRMYEELQLAG-LEPDVFTYNALIRGY---SLSENPEHA 1087
Query: 252 LKELEN 257
+N
Sbjct: 1088 YTVYKN 1093
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 133/358 (37%), Gaps = 45/358 (12%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLN 131
A+ L M + G V +D + K +D A F + + S +TY +LL+
Sbjct: 526 AVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLS 585
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
KE +KA L E M E +++ FN+L+ + K E + +M P
Sbjct: 586 GLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKP 645
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D TYN + L N ++ A ++K+ + D T L V+ G A
Sbjct: 646 DVLTYNTVIYGLIKENKVNHAFWFFHQLKKS--MHPDHVTICTLLPGLVKCGQIGDAISI 703
Query: 252 LKELE-------NRNAHRDLSAYQFL-------------ITLYGQTGNLSEVYRIWRSL- 290
++ NR+ DL + + L G S + + R L
Sbjct: 704 ARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLC 763
Query: 291 -----------------RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES-GCATY 332
+L T SY +I L+ + A FK+ ++ GCA
Sbjct: 764 KHKRELYAYQIFDKFTKKLGISPTL-ASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAP- 821
Query: 333 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
D N+++ + K G++ EL + R P+A T+ I ++ ++ A+D
Sbjct: 822 DAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALD 879
>gi|255661202|gb|ACU25770.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 426
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 120/275 (43%), Gaps = 1/275 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM+E + + +++L+ L K + +
Sbjct: 6 SPDRYTYSTLITHFGKEGLFDDALSWLQKMEEDRVPGDLVLYSNLIELSRKLCDYSRAIS 65
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S I PD YN + A ++ EM+ G V D ++ L ++Y
Sbjct: 66 IFSRLKRSGIAPDLVAYNSMINVFGKAKLFREARALVSEMRTAG-VMPDTVSYCTLLTMY 124
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ S+R
Sbjct: 125 VENQKFLEALSLFSEMREIQCSFDLTTCNIMIDVYGQLGMAKEADKLFWSMRKMGIEPNV 184
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMVIYGKTLEHEKANNLIQE 244
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
+ RG +PNA T+ + + G + A +K
Sbjct: 245 MQDRGIEPNAITYSTIISIWGKVGKLDRAAMLFQK 279
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 111/221 (50%), Gaps = 20/221 (9%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M++ + +++ ++++++++ K G ++ +
Sbjct: 217 QNVVTYNSMMVIYGKTLEHEKANNLIQEMQDRGIEPNAITYSTIISIWGKVGKLDRAAML 276
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q+++ S I D Y + A ++ A+R+++E+KR + D T LA
Sbjct: 277 FQKLRCSGIEIDQVLYQTMIVAYERAGLVAHAKRLLQELKRPDNIPRD-TAIHILAG--- 332
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQT---GNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ +D++ ++ +I L+ + N+ EV+ R L FP++
Sbjct: 333 -AGRIEEATWVFRQAVEAGEVKDITVFERMINLFSKHKKYPNVVEVFDKMRGLGY-FPHS 390
Query: 298 ANISYLNMIQVLVN----LKDLPGAEKCFKEWES-GCATYD 333
N+I +++N L + A + E + GCA D
Sbjct: 391 ------NVIALVLNAYGKLHEFDKANSVYMEMQDEGCAFSD 425
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 85/200 (42%), Gaps = 4/200 (2%)
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
++ PD YTY+ + A +++M+ D RV D +SNL + + + +
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEED-RVPGDLVLYSNLIELSRKLCDYSR 62
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 307
A L+ DL AY +I ++G+ E + +R A +SY ++
Sbjct: 63 AISIFSRLKRSGIAPDLVAYNSMINVFGKAKLFREARALVSEMRTAGVMPDTVSYCTLLT 122
Query: 308 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
+ V + A F E ++D+ N+MI Y + G + A++L R+ G +P
Sbjct: 123 MYVENQKFLEALSLFSEMREIQCSFDLTTCNIMIDVYGQLGMAKEADKLFWSMRKMGIEP 182
Query: 368 NAKTWEIFSDYYLRNGDMKL 387
N ++ Y GD +L
Sbjct: 183 NVVSYNTLLRVY---GDAEL 199
>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 137/337 (40%), Gaps = 11/337 (3%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TYG+++N +CK+ + + LL +M L + +N+++ K GH K I+ M
Sbjct: 276 TYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGM 335
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
PD TYN + +S A++++E+ G + + +++ L Y + G
Sbjct: 336 IECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKF-SYTPLIHAYCKQGG 394
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISY 302
+++A L E+ R DL Y L+ G + I + R FP+ A I
Sbjct: 395 YDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPD-AGIYN 453
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+ M + K LP A+ E D V ++ + + G L+ A +L E
Sbjct: 454 ILMSGLCKKFK-LPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIE 512
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ 422
+G +P + Y + G MK A+ C+ R P T T + + +
Sbjct: 513 KGMNPGIVGYNAMIKGYCKFGMMKDAMACIN------RMKKRHLAPDEFTYSTVIDGYVK 566
Query: 423 EKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
+ D+DGA+ + K V + LI + G
Sbjct: 567 QHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKG 603
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 126/288 (43%), Gaps = 9/288 (3%)
Query: 101 AKVQGIDAAENYFVDLPETSK--NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSS 158
K G D A N+ +++ E + +TYG+L++ + A + EKM E + +
Sbjct: 390 CKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDA 449
Query: 159 MPFNSLMTLYAKTGHPEKIPA---IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERV 215
+N LM+ K K+PA ++ EM S++PD++ Y + ++ A ++
Sbjct: 450 GIYNILMSGLCKK---FKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKL 506
Query: 216 IEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYG 275
E G + ++ + Y + G+ + A + ++ R+ D Y +I Y
Sbjct: 507 FELTIEKG-MNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYV 565
Query: 276 QTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 335
+ +L +++R + ++Y ++I DL + K F+E ++ ++
Sbjct: 566 KQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVV 625
Query: 336 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
+++IG++ KE +L +A E PN T+ + + +NG
Sbjct: 626 TYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNG 673
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 126/314 (40%), Gaps = 8/314 (2%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +L++ C++ +A+ LLE+ L + + L+ Y K G ++ + E
Sbjct: 345 VTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIE 404
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M PD TY + L ++ A + E+M G V D ++ L S +
Sbjct: 405 MTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERG-VFPDAGIYNILMSGLCKKF 463
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
A+ L E+ +++ D Y L+ + + GNL E +++ N + Y
Sbjct: 464 KLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYN 523
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
MI+ + A C + D + +I Y K+ L+ A+++ +
Sbjct: 524 AMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKM 583
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQE 423
PN T+ + + R GD+ ++ + G VP+ T + F +E
Sbjct: 584 KCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACG------LVPNVVTYSILIGSFCKE 637
Query: 424 -KDVDGAEGFLEIL 436
K +D A F E+L
Sbjct: 638 AKLIDAASFFEEML 651
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/301 (19%), Positives = 119/301 (39%), Gaps = 7/301 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +Y L++ YCK+ ++A L +M E + + +L+ G + I
Sbjct: 378 NKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIR 437
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
++M + PD+ YN+ M L + A+ ++ EM D V D ++ L ++
Sbjct: 438 EKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEM-LDQSVLPDAFVYATLVDGFIR 496
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G ++A + + + + + Y +I Y + G + + ++ +
Sbjct: 497 NGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFT 556
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I V DL GA+K F+E ++ +I + ++G L + ++ +
Sbjct: 557 YSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQ 616
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
G PN T+ I + + + A E+ + K VP+ T + F
Sbjct: 617 ACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMN------KCVPNDVTFNYLVNGFS 670
Query: 422 Q 422
+
Sbjct: 671 K 671
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/346 (19%), Positives = 125/346 (36%), Gaps = 19/346 (5%)
Query: 134 CKELMTEKAEALLEKMKELNLGFSSMP----FNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
CKE E+ L+E G +P +N+L+ Y K G E + E+K
Sbjct: 215 CKEGKLEEGRKLIED----RWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGF 270
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
+P TY + D +R++ EM G + + ++ + + G KA
Sbjct: 271 LPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRG-LTVNVQVYNTIIDARYKHGHIVKAV 329
Query: 250 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQ 307
++ + D+ Y LI+ + G +SE ++ + PN SY +I
Sbjct: 330 ETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPN--KFSYTPLIH 387
Query: 308 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
A E D+ ++ G ++ A ++E+ RG P
Sbjct: 388 AYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFP 447
Query: 368 NAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVD 427
+A + I + + A L + +D +P + T + F + ++D
Sbjct: 448 DAGIYNILMSGLCKKFKLPAAKLLLAEMLDQ------SVLPDAFVYATLVDGFIRNGNLD 501
Query: 428 GAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEK 473
A E+ + + G+ + +I+ Y G M +M+K
Sbjct: 502 EARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKK 547
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 93/228 (40%), Gaps = 15/228 (6%)
Query: 232 FSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS---EVYRIWR 288
+S+L + + +F + E L+ + A +I Y +G + E+Y
Sbjct: 97 YSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFVL 156
Query: 289 SLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW----ESGCATYDIRVTNVMIGAY 344
FP+ I+ +++ +LV L + A K + E +G D T +M+
Sbjct: 157 KTYTYFPDV--IACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGL 214
Query: 345 AKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGG 404
KEG+LE +L E +G PN + D Y + GDM++A + G
Sbjct: 215 CKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKG----- 269
Query: 405 KWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLI 452
++P+ ET + F ++ D + L + + V+V+ +I
Sbjct: 270 -FLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTII 316
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 69/141 (48%), Gaps = 1/141 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
+ + TY ++++ Y K+ + A+ + +M ++ + + + SL+ + + G +
Sbjct: 551 APDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLK 610
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +EM+A ++P+ TY++ + + + A EEM + V D TF+ L + +
Sbjct: 611 IFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPND-VTFNYLVNGF 669
Query: 240 VEAGLFEKAERALKELENRNA 260
+ G +E+ + EN+ +
Sbjct: 670 SKNGTRAISEKGNEFQENKQS 690
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 169/401 (42%), Gaps = 37/401 (9%)
Query: 12 NIAKRSKKHLEEA-LYDRLFKKG--SSDVSVRQQLNQFLKSKK-----RVFKWEVGDTLK 63
++ SK H + + LYD + ++G S VR + ++SKK +FK VG +
Sbjct: 4 SVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFR 63
Query: 64 --------------KLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAA 109
KL D KL A++L E M++R + V + + + K + I A
Sbjct: 64 PDKLVYGRAMLAAVKLGDLKL---AMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDA 120
Query: 110 ENYFVDLP--ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTL 167
E F ++ N +T+ +L++ YCK + A L E+MK+ + S + FNSL++
Sbjct: 121 EKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSG 180
Query: 168 YAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAA 227
K E+ ++ E+K + +PD +TY++ L +D +GA + V
Sbjct: 181 LCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKI 240
Query: 228 DWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW 287
D T S L + + G EKAE LK L Y ++ Y Q G++
Sbjct: 241 DNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTI 300
Query: 288 -----RSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 342
R LR PN I++ ++I ++ + AE+ K+ + N++I
Sbjct: 301 EQMESRGLR---PNC--IAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILID 355
Query: 343 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
Y + ++ E G PN ++ + ++G
Sbjct: 356 GYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDG 396
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 152/357 (42%), Gaps = 18/357 (5%)
Query: 79 ENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL--PETSKNHLTYGSLLNCYCKE 136
E ME RG+ +D ++Q ID AE + + + + TY L++ Y +
Sbjct: 301 EQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRL 360
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 196
+ + +LE+M+E + + + SL+ K G + ++++M ++P++ Y
Sbjct: 361 CVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIY 420
Query: 197 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 256
N+ + V + A R +EM ++G + A T+++L + G ++AE +
Sbjct: 421 NMLIDGSCTVGKLREALRFFDEMSKNG-IGATIVTYNSLIKGLCKMGKLKEAEEMFFLIT 479
Query: 257 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL-RLAFPNTANISYLNMIQVLVNLKDL 315
+ D+ Y LI+ Y GN + ++ ++ +L T +N L++
Sbjct: 480 STGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPT-----INTFHPLISGCSK 534
Query: 316 PGA---EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
G E F E + D V N MI Y + G ++ A L++ G P+ KT+
Sbjct: 535 EGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTY 594
Query: 373 EIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 429
+L+ G + D +D + G +P ++T ++ KD +GA
Sbjct: 595 NSLILGHLKEGKLSETKD----LVDDMKAKG--LIPEADTYSLLIQGHCDLKDFNGA 645
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 112/265 (42%), Gaps = 8/265 (3%)
Query: 118 ETSKNHL-----TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTG 172
E SKN + TY SL+ CK ++AE + + + +NSL++ Y+ G
Sbjct: 442 EMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAG 501
Query: 173 HPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTF 232
+ +K + + MK + P T++ + + I E + EM + ++ D +
Sbjct: 502 NSQKCLELYETMKKLGLKPTINTFHPLISGCSK-EGIKLKETLFNEMLQ-MNLSPDRVVY 559
Query: 233 SNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL 292
+ + Y E G +KA KE+ + D Y LI + + G LSE + ++
Sbjct: 560 NAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKA 619
Query: 293 AFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLEN 352
+Y +IQ +LKD GA ++E ++ + N + K+GRL+
Sbjct: 620 KGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQE 679
Query: 353 AEELKERARRRGADPNAKTWEIFSD 377
A+ + G D N T E SD
Sbjct: 680 AQSICSEMIANGMD-NLDTNEDLSD 703
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 102/199 (51%), Gaps = 9/199 (4%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLN 131
L+L E M+K G+ T++ + +K +GI E F ++ + S + + Y ++++
Sbjct: 506 CLELYETMKKLGLKPTINTFHPLISGCSK-EGIKLKETLFNEMLQMNLSPDRVVYNAMIH 564
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CY + +KA +L ++M ++ + + +NSL+ + K G + ++ +MKA ++P
Sbjct: 565 CYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIP 624
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
++ TY++ ++ + D +GA EM +G + + + L++ + G ++A+
Sbjct: 625 EADTYSLLIQGHCDLKDFNGAYVWYREMLENGFL-PNVCICNELSTGLRKDGRLQEAQSI 683
Query: 252 LKE-----LENRNAHRDLS 265
E ++N + + DLS
Sbjct: 684 CSEMIANGMDNLDTNEDLS 702
>gi|356513567|ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 857
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 151/380 (39%), Gaps = 30/380 (7%)
Query: 93 QAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMK 150
I + L+ + +D F ++P + +Y +++N Y + + LL MK
Sbjct: 137 HTIMITLLGREGLLDKCREVFDEMPSNGVVRTVYSYTAIINAYGRNGQFHASLELLNGMK 196
Query: 151 ELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDI 209
+ + S + +N+++ A+ G E + + EM+ I PD TYN + A A
Sbjct: 197 QERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLG 256
Query: 210 SGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQF 269
AE V M G + D T+S L + + EK L+E+E D+++Y
Sbjct: 257 DEAEMVFRTMNESG-IVPDINTYSYLVQTFGKLNRLEKVSELLREMECGGNLPDITSYNV 315
Query: 270 LITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPG----AEKCFK 323
L+ Y + G++ E ++R ++ A N A S VL+NL G F
Sbjct: 316 LLEAYAELGSIKEAMGVFRQMQAAGCVANAATYS------VLLNLYGKHGRYDDVRDLFL 369
Query: 324 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE--IFS--DYY 379
E + D N++I + + G + L +PN +T+E IF+
Sbjct: 370 EMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIFACGKGG 429
Query: 380 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 439
L K+ + EK + VPSS+ + F Q + A + +
Sbjct: 430 LYEDAKKILLHMNEKGV----------VPSSKAYTGVIEAFGQAALYEEALVMFNTMNEV 479
Query: 440 VDDLGVEVFEPLIRTYAAAG 459
+ VE + LI +A G
Sbjct: 480 GSNPTVETYNSLIHAFARGG 499
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/370 (19%), Positives = 156/370 (42%), Gaps = 9/370 (2%)
Query: 119 TSKNHLTYGSLLN-CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
S + LTY +++N C L E L +M+ + + +N+L+ A G ++
Sbjct: 200 VSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEA 259
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
+ + M S I+PD TY+ ++ +N + ++ EM+ G + D T+++ L
Sbjct: 260 EMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMECGGNL-PDITSYNVLLE 318
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
Y E G ++A ++++ + + Y L+ LYG+ G +V ++ ++++ +
Sbjct: 319 AYAELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVSNTDP 378
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
+Y +IQV F + +++ +I A K G E+A+++
Sbjct: 379 DAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIFACGKGGLYEDAKKIL 438
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 417
+G P++K + + + + + A+ + G P+ ET + +
Sbjct: 439 LHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVGSN------PTVETYNSLI 492
Query: 418 RHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVS 477
F + AE L + ++ V F +I + G+ + ++MEK
Sbjct: 493 HAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIEAFRQGGQYEEAVKSYVEMEKANC- 551
Query: 478 EASKKLLEAI 487
E ++ LEA+
Sbjct: 552 EPNELTLEAV 561
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 106/269 (39%), Gaps = 5/269 (1%)
Query: 115 DLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP 174
+LP+ + +Y LL Y + ++A + +M+ ++ ++ L+ LY K G
Sbjct: 306 NLPDIT----SYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRY 361
Query: 175 EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSN 234
+ + + EMK S+ PD+ TYN+ ++ + +M + V + T+
Sbjct: 362 DDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEE-NVEPNMQTYEG 420
Query: 235 LASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF 294
L + GL+E A++ L + + AY +I +GQ E ++ ++
Sbjct: 421 LIFACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVG 480
Query: 295 PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAE 354
N +Y ++I AE D+ N +I A+ + G+ E A
Sbjct: 481 SNPTVETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIEAFRQGGQYEEAV 540
Query: 355 ELKERARRRGADPNAKTWEIFSDYYLRNG 383
+ + +PN T E Y G
Sbjct: 541 KSYVEMEKANCEPNELTLEAVLSIYCSAG 569
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/319 (20%), Positives = 122/319 (38%), Gaps = 40/319 (12%)
Query: 76 KLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCY 133
+L ME G ++ + L+ A++ I A F + N TY LLN Y
Sbjct: 296 ELLREMECGGNLPDITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLY 355
Query: 134 CKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDS 193
K + L +MK N + +N L+ ++ + G+ +++ + +M ++ P+
Sbjct: 356 GKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNM 415
Query: 194 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAAD--WT--------------------- 230
TY + A A++++ M G V + +T
Sbjct: 416 QTYEGLIFACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNT 475
Query: 231 -----------TFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGN 279
T+++L + GL+++AE L + RD+ ++ +I + Q G
Sbjct: 476 MNEVGSNPTVETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIEAFRQGGQ 535
Query: 280 LSEVYRIWRSLRLAF--PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVT 337
E + + + A PN + + I L D E+ F+E ++ +
Sbjct: 536 YEEAVKSYVEMEKANCEPNELTLEAVLSIYCSAGLVD--EGEEQFQEIKASGILPSVMCY 593
Query: 338 NVMIGAYAKEGRLENAEEL 356
+M+ YAK RL +A L
Sbjct: 594 CMMLALYAKNDRLNDAYNL 612
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 96/420 (22%), Positives = 169/420 (40%), Gaps = 12/420 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLN 131
ALK+ + M G T + ++ K ++ A + +++ E S + +T+ SL+N
Sbjct: 212 ALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVN 271
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C+ A +++ M E +NSL++ K G EK I+Q+M P
Sbjct: 272 GFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSP 331
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
++ TYN + AL N+I A + + G + D TF+ L + + A
Sbjct: 332 NTVTYNTLISALCKENEIEAATDLARILVSKG-LLPDVCTFNTLIQGLCLSKNQDIAMEM 390
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
+E++N+ D Y LI L E + + + + + Y +I L
Sbjct: 391 FEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCK 450
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+ + AE+ F + E + N +I K R+E A +L ++ G P+ T
Sbjct: 451 SRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFT 510
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG 431
+ Y+ R GD++ A D ++ G P T T + + VD A
Sbjct: 511 YNSLLTYFCRVGDIEKAGDIVQTMASNG------CEPDIFTYGTLIGGLCRAGRVDVASK 564
Query: 432 FLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVM-LRRLKMEKVEVSEA--SKKLLEAIC 488
L ++ L + P+I+ RT M L R MEK + +A K + +C
Sbjct: 565 LLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLC 624
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 82/210 (39%), Gaps = 38/210 (18%)
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
PD+ YN+ + AL N + E + +M +G + D +TF+ L +A A
Sbjct: 121 PDTNFYNIALNALVEDNKLKLVEMLHSKMVNEG-IVLDVSTFNVLIKALCKAHQLRPAIL 179
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
L+E+ N D I++ ++Q +
Sbjct: 180 MLEEMANHGLKPD-----------------------------------EITFTTLMQGFI 204
Query: 311 NLKDLPGAEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
DL GA K K+ GC ++ V V++ + KEGR+E A G P+
Sbjct: 205 EEGDLNGALKMKKQMLGYGCLLTNVSV-KVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQ 263
Query: 370 KTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
T+ + + R G++ A+D ++ I+ G
Sbjct: 264 VTFNSLVNGFCRIGNVNDALDIVDFMIEKG 293
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 85/427 (19%), Positives = 159/427 (37%), Gaps = 83/427 (19%)
Query: 125 TYGSLLNCYCKELMTEKAEALLE-------------------------------KMKELN 153
T+ L+ CK A +LE KMK+
Sbjct: 160 TFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQM 219
Query: 154 LGFSSMPFN----SLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDI 209
LG+ + N L+ + K G E+ + E+ PD T+N + + ++
Sbjct: 220 LGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNV 279
Query: 210 SGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQF 269
+ A +++ M G D T+++L S + G FEKA L+++ R + Y
Sbjct: 280 NDALDIVDFMIEKG-FDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNT 338
Query: 270 LITLYGQTGNL---SEVYRIWRSLRLAFPNTAN--------------------------- 299
LI+ + + +++ RI S L P+
Sbjct: 339 LISALCKENEIEAATDLARILVSKGL-LPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNK 397
Query: 300 ------ISYLNMIQVLVNLKDLPGAEKCFKEWE-SGCATYDIRVTNVMIGAYAKEGRLEN 352
+Y +I L + L A KE E SGCA + V N +I K R+E+
Sbjct: 398 GCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAV-VYNTLIDGLCKSRRIED 456
Query: 353 AEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSET 412
AEE+ ++ G ++ T+ D +N ++ A +++ I G P T
Sbjct: 457 AEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEG------LKPDKFT 510
Query: 413 IRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR--TSPVMLRRLK 470
+ + +F + D++ A ++ + + + + LI AGR + +LR ++
Sbjct: 511 YNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQ 570
Query: 471 MEKVEVS 477
M+ + ++
Sbjct: 571 MKGIVLT 577
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 54/279 (19%), Positives = 109/279 (39%), Gaps = 11/279 (3%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y LN ++ + E L KM + FN L+ K +++EM
Sbjct: 126 YNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMA 185
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
+ PD T+ M+ D++GA ++ ++M G + + + L + + + G
Sbjct: 186 NHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSV-KVLVNGFCKEGRV 244
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
E+A R + E+ D + L+ + + GN+++ I + + +Y ++
Sbjct: 245 EEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSL 304
Query: 306 IQVLVNLKDLPGA-----EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
I + L + A + +E TY N +I A KE +E A +L
Sbjct: 305 ISGMCKLGEFEKAIEILQQMILRECSPNTVTY-----NTLISALCKENEIEAATDLARIL 359
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+G P+ T+ + + +A++ E+ + G
Sbjct: 360 VSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKG 398
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 158/393 (40%), Gaps = 14/393 (3%)
Query: 29 LFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNK 88
L K S V++ Q+ Q V V + L K D L AL L + MEK +
Sbjct: 200 LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL---ALSLLKKMEKGKIEA 256
Query: 89 TVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALL 146
V +D + K + +D A N F ++ + TY SL++C C A LL
Sbjct: 257 DVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 316
Query: 147 EKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV 206
M E + + + F++L+ + K G + + EM SI PD +TY+ +
Sbjct: 317 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 376
Query: 207 NDISGAERVIEEM-KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 265
+ + A+ + E M +D + T+S L + +A E+ +E+ R +
Sbjct: 377 DRLDEAKHMFELMISKD--CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 434
Query: 266 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 325
Y LI + Q + +++ + + ++Y ++ L L A F+
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 494
Query: 326 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 385
+ DI N+MI K G++E+ EL +G PN + + R G
Sbjct: 495 QRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSK 554
Query: 386 KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 418
+ A L+K + G +P+S T T +R
Sbjct: 555 EEADSLLKKMKEDGP------LPNSGTYNTLIR 581
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 84/387 (21%), Positives = 157/387 (40%), Gaps = 22/387 (5%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
+ L E M+ G++ + +I ++ + + A + + + +T SLLN
Sbjct: 102 VISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLN 161
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLM-TLYAKTGHPEKIPAIIQEMKASSIM 190
YC A AL+++M E+ + F +L+ L+ E + A++ +M
Sbjct: 162 GYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV-ALVDQMVQRGCQ 220
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
PD TY + L DI A ++++M++ G++ AD ++ + + + A
Sbjct: 221 PDLVTYGTVVNGLCKRGDIDLALSLLKKMEK-GKIEADVVIYNTIIDGLCKYKHMDDALN 279
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQV 308
E++N+ D+ Y LI+ G S+ R+ + R PN S L I
Sbjct: 280 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL--IDA 337
Query: 309 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 368
V L AEK + E DI + +I + RL+ A+ + E + PN
Sbjct: 338 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 397
Query: 369 AKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDG 428
T+ + + ++ ++ + G V ++ T T + F Q +D D
Sbjct: 398 VVTYSTLIKGFCKAKRVEEGMELFREMSQRG------LVGNTVTYTTLIHGFFQARDCDN 451
Query: 429 AEGFLEILKKAVDDLGVEVFEPLIRTY 455
A +++ K + +GV P I TY
Sbjct: 452 A----QMVFKQMVSVGV---HPNILTY 471
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/344 (19%), Positives = 129/344 (37%), Gaps = 50/344 (14%)
Query: 157 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
S + FN L++ AK E + ++ ++M+ I D YTY++++ + +S A V+
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 217 EEMKRDGRVAADWTTFSNLASIYVEA------------------------------GLF- 245
+M + G D T S+L + Y + GLF
Sbjct: 142 AKMMKLG-YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 246 -EKAERA---LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
KA A + ++ R DL Y ++ + G++ + + + +
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I L K + A F E ++ D+ + +I GR +A L
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 362 RRGADPNAKTWEIFSDYYLRNGDM----KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 417
R +PN T+ D +++ G + KL + ++++ID P T + +
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID----------PDIFTYSSLI 370
Query: 418 RHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 461
F +D A+ E++ V + LI+ + A R
Sbjct: 371 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRV 414
Score = 41.6 bits (96), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY ++ CK E L + + + + +N++++ + + G E+ +++++M
Sbjct: 505 TYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKM 564
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTT 231
K +P+S TYN +RA D + +I+EM+ G A D +T
Sbjct: 565 KEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCG-FAGDAST 610
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP--ETSKNHLTYGSLLN 131
A+ + E +++ M + I ++ + K ++ F +L S N + Y ++++
Sbjct: 487 AMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMIS 546
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C++ E+A++LL+KMKE +S +N+L+ + G E +I+EM++
Sbjct: 547 GFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAG 606
Query: 192 DSYT 195
D+ T
Sbjct: 607 DAST 610
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 129/292 (44%), Gaps = 4/292 (1%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
S N +Y L+ C+ ++A LL +M + + + + SL++ K G ++
Sbjct: 83 CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAV 142
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+ M PD YNV + + D+ A R+ EEM G + +T +++L S
Sbjct: 143 DLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFT-YNSLLSG 201
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR-LAFPNT 297
+ G F + + K++ + ++ + L+ + + G++ E +R++ +R L P
Sbjct: 202 FSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPD 261
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
+SY +I+ + + A++ +E DI N++I Y+K G L++A +L
Sbjct: 262 V-VSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLF 320
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRG-DGGKWVP 408
+ G +P+A ++ D R G + A + I G D +P
Sbjct: 321 YEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIP 372
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 146/369 (39%), Gaps = 39/369 (10%)
Query: 25 LYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKR 84
L + L K G D V N L + + G L+ L + + A + M +
Sbjct: 23 LLEVLAKSGRCD-HVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQ 81
Query: 85 GMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK--NHLTYGSLLNCYCKELMTEKA 142
G + V +I + + + Q +D A ++ + N +TYGSLL+ CK ++A
Sbjct: 82 GCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEA 141
Query: 143 EALLEKM------------KELNLGFS-------------------SMP----FNSLMTL 167
L +M L GFS +P +NSL++
Sbjct: 142 VDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSG 201
Query: 168 YAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAA 227
+++ G ++ ++ ++M +P+ +T+N + + D+ A R+ EM+ G
Sbjct: 202 FSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG-CPP 260
Query: 228 DWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW 287
D +++ L G +A+R L+E+ D+ +Y LI Y ++G L +++
Sbjct: 261 DVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLF 320
Query: 288 RSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKE 347
+ + SY +I L + A FK+ + + D V ++ +
Sbjct: 321 YEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRG 380
Query: 348 GRLENAEEL 356
RL + EL
Sbjct: 381 ERLTESCEL 389
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 101/236 (42%), Gaps = 3/236 (1%)
Query: 151 ELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDIS 210
+++ ++ +N L+ + AK+G + + +M A+ +P++YTY +R+L
Sbjct: 10 QVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFE 69
Query: 211 GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 270
A V M G + + ++S L + ++A L E+ + ++ Y L
Sbjct: 70 EARSVFRGMAAQG-CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSL 128
Query: 271 ITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGC 329
++ + G L E ++ + + Y +I D+ A + F+E E GC
Sbjct: 129 LSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGC 188
Query: 330 ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 385
+ N ++ ++++G + L + R+G PN T+ D + + GDM
Sbjct: 189 IP-TVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDM 243
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 133/324 (41%), Gaps = 9/324 (2%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
+ N TY L+ C E+A ++ M+ +++ +N+L+ + + G +
Sbjct: 6 VAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAE 65
Query: 179 AIIQEMK-ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
++ M+ + P+ T+N + L + GA +V +EM R+G +A D +++ L S
Sbjct: 66 RVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREG-LAPDVVSYNTLLS 124
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
Y + G ++ E+ R D+ + LI + GNL + + +R
Sbjct: 125 GYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRM 184
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
+++ +I L A +E + N +I Y K GR++ A EL
Sbjct: 185 NEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELI 244
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 417
+ P+ T+ Y + G++ A +K + G +P + T + +
Sbjct: 245 REMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG------VLPDAITYSSLI 298
Query: 418 RHFEQEKDV-DGAEGFLEILKKAV 440
R +EK + D E F +L+ V
Sbjct: 299 RGLCEEKRLNDACELFENMLQLGV 322
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 117/254 (46%), Gaps = 5/254 (1%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
++Y +LL+ YCK ++ A+ +M + L + F SL+ K G+ E+ A++ +
Sbjct: 117 VSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQ 176
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ + + T+ + + A +EEM++ G + ++ L + Y + G
Sbjct: 177 MRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCG-IQPSVVCYNALINGYCKLG 235
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANIS 301
+ A ++E+E + D+ Y +I+ Y + GNL +++ + + + P+ I+
Sbjct: 236 RMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDA--IT 293
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y ++I+ L K L A + F+ D +I + KEG +E A L +
Sbjct: 294 YSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMI 353
Query: 362 RRGADPNAKTWEIF 375
R+G P+ T+ +
Sbjct: 354 RKGVLPDVVTYSVL 367
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 120/278 (43%), Gaps = 1/278 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +T+ S++N CK E A + ++M L + +N+L++ Y K G + A+
Sbjct: 80 NLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVF 139
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EM ++PD T+ + A ++ A ++ +M+ G + + TF+ L + +
Sbjct: 140 SEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG-LRMNEVTFTALIDGFCK 198
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G + A A++E+ + Y LI Y + G + + R + ++
Sbjct: 199 KGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVT 258
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I + +L A + ++ D + +I +E RL +A EL E
Sbjct: 259 YSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENML 318
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ G P+ T+ D + + G+++ A+ ++ I G
Sbjct: 319 QLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKG 356
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 98/243 (40%), Gaps = 41/243 (16%)
Query: 184 MKASSIMPDSYTYNVWMRALAA-----------------------------------VND 208
M + P+ YTYN+ +RAL A +
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 209 ISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQ 268
+ GAERV+ M+ +G + TF+++ + +AG E A + E+ D+ +Y
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120
Query: 269 FLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW- 325
L++ Y + G L E ++ + R P+ +++ ++I +L A +
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDV--VTFTSLIHATCKAGNLEQAVALVAQMR 178
Query: 326 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 385
E G ++ T +I + K+G L++A E R+ G P+ + + Y + G M
Sbjct: 179 ERGLRMNEVTFT-ALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRM 237
Query: 386 KLA 388
LA
Sbjct: 238 DLA 240
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 115/262 (43%), Gaps = 18/262 (6%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY SL+ C+E A L E M +L + + +L+ + K G+ EK ++ E
Sbjct: 292 ITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDE 351
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA--------------ADW 229
M ++PD TY+V + L+ A R++ ++ + V A++
Sbjct: 352 MIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEF 411
Query: 230 TTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS 289
+ L + GL ++A++ + + +RN D S Y LI + + GN+ + +
Sbjct: 412 KSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQ 471
Query: 290 -LRLAF-PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKE 347
LR F PN+ S +++++ L + A+ ++ + C D + +I KE
Sbjct: 472 MLRSGFSPNST--STISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKE 529
Query: 348 GRLENAEELKERARRRGADPNA 369
G ++ ++ R G P++
Sbjct: 530 GNVDALIDVLCGMARDGLLPSS 551
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/331 (18%), Positives = 142/331 (42%), Gaps = 24/331 (7%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +T+ +L++ +CK+ + A +E+M++ + S + +N+L+ Y K G + +I
Sbjct: 185 NEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELI 244
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+EM+A + PD TY+ + V ++ A ++ ++M + G V D T+S+L E
Sbjct: 245 REMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG-VLPDAITYSSLIRGLCE 303
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTAN 299
A + + D Y LI + + GN+ + + + + P+
Sbjct: 304 EKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVT 363
Query: 300 ISYL--------------NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 345
S L ++ L + +P K + C+ + + ++ +
Sbjct: 364 YSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIK-YDALMLCCSKAEFKSVVALLKGFC 422
Query: 346 KEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGK 405
+G ++ A+++ + R + + I + R G+++ A+ ++ + +G
Sbjct: 423 MKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSG------ 476
Query: 406 WVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 436
+ P+S + + +R +E V A+ ++ L
Sbjct: 477 FSPNSTSTISLVRGLFEEGMVVEADNAIQDL 507
>gi|224143015|ref|XP_002324819.1| predicted protein [Populus trichocarpa]
gi|222866253|gb|EEF03384.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 155/340 (45%), Gaps = 12/340 (3%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ + + +++N + + E A KM+E + ++ +N+L+ Y G PE+ ++
Sbjct: 82 DSIFFNAVINAFSESGNMESAMETFWKMQENGMKPTTSTYNTLIKGYGIAGKPEESVKLL 141
Query: 182 QEM-KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
+ M + ++ P+ TYNV +RA I+ A V+ +M G + D T++ +A+ Y
Sbjct: 142 ELMSQEGNVKPNLRTYNVLVRAWCNKKRITEAWNVVYKMIASG-IQPDVVTYNTIATAYA 200
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI-WRSLRLAF-PNTA 298
+ G ++AE + E++N + +++ Y + G + E R +R L PN
Sbjct: 201 QKGALDQAEGVILEMQNNGVQPNERTCGIIMSGYCKEGRIREALRFAYRMKELGIHPNL- 259
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+ + ++I+ V + D G ++ E D+ + ++ A++ G +E E+ +
Sbjct: 260 -VIFNSLIKGFVAIMDRDGVDEVLNLMEEFGVKPDVITFSTIMNAWSTAGFMEKCREIFD 318
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 418
+ G +P+A + I + Y+R + + A + L I +G + P+ T +
Sbjct: 319 DMVKAGIEPDAHAYSILAKGYVRAQEPEKAEELLTTMIKSG------FQPNVVIFTTVIS 372
Query: 419 HFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAA 458
+ +D A + + + ++ FE LI +A A
Sbjct: 373 GWCSAGKMDYAVRVFDKMCQRGISPNLKTFETLIWGFAEA 412
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 3/189 (1%)
Query: 101 AKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSS 158
A+ +D AE +++ N T G +++ YCKE +A +MKEL + +
Sbjct: 200 AQKGALDQAEGVILEMQNNGVQPNERTCGIIMSGYCKEGRIREALRFAYRMKELGIHPNL 259
Query: 159 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 218
+ FNSL+ + + + ++ M+ + PD T++ M A + + + ++
Sbjct: 260 VIFNSLIKGFVAIMDRDGVDEVLNLMEEFGVKPDVITFSTIMNAWSTAGFMEKCREIFDD 319
Query: 219 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 278
M + G + D +S LA YV A EKAE L + ++ + +I+ + G
Sbjct: 320 MVKAG-IEPDAHAYSILAKGYVRAQEPEKAEELLTTMIKSGFQPNVVIFTTVISGWCSAG 378
Query: 279 NLSEVYRIW 287
+ R++
Sbjct: 379 KMDYAVRVF 387
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/300 (19%), Positives = 119/300 (39%), Gaps = 12/300 (4%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE-------TSKNHLTYGSLLNCY 133
M++ GM T S + + K GI V L E N TY L+ +
Sbjct: 109 MQENGMKPTTST----YNTLIKGYGIAGKPEESVKLLELMSQEGNVKPNLRTYNVLVRAW 164
Query: 134 CKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDS 193
C + +A ++ KM + + +N++ T YA+ G ++ +I EM+ + + P+
Sbjct: 165 CNKKRITEAWNVVYKMIASGIQPDVVTYNTIATAYAQKGALDQAEGVILEMQNNGVQPNE 224
Query: 194 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 253
T + M I A R MK G + + F++L +V + + L
Sbjct: 225 RTCGIIMSGYCKEGRIREALRFAYRMKELG-IHPNLVIFNSLIKGFVAIMDRDGVDEVLN 283
Query: 254 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLK 313
+E D+ + ++ + G + + I+ + A +Y + + V +
Sbjct: 284 LMEEFGVKPDVITFSTIMNAWSTAGFMEKCREIFDDMVKAGIEPDAHAYSILAKGYVRAQ 343
Query: 314 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 373
+ AE+ ++ + +I + G+++ A + ++ +RG PN KT+E
Sbjct: 344 EPEKAEELLTTMIKSGFQPNVVIFTTVISGWCSAGKMDYAVRVFDKMCQRGISPNLKTFE 403
>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
Length = 796
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 141/326 (43%), Gaps = 20/326 (6%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + +TY +LLN +C++ M +A ALL +MK + + +N+L++ +A+ G ++
Sbjct: 240 SPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATK 299
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+++ M A PD TYNV L + A R+ +EM+R D T++ L
Sbjct: 300 VVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDAC 359
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
+ A R L+E+ ++ L + ++ + G L E + + ++A A
Sbjct: 360 FKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEA--LGKLEKIAEEGLAP 417
Query: 300 --ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
I+Y +I ++ A E D N ++ K R E+AEEL
Sbjct: 418 DVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELL 477
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 417
+RG P+ ++ Y + + + A+ ++ I+ K +PS T T +
Sbjct: 478 HSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIER------KLIPSISTYNTLI 531
Query: 418 RHFEQEKDVDGAEGFLEILKKAVDDL 443
+ + +E LK+A+D L
Sbjct: 532 KGLCR----------MERLKEAIDKL 547
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 105/252 (41%), Gaps = 6/252 (2%)
Query: 151 ELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDIS 210
EL L + FN L+ + G A + M+ + PD+ TYN + A +
Sbjct: 201 ELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLG 260
Query: 211 GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 270
A ++ MKRDG +A T++ L S + G ++A + ++ + DL Y L
Sbjct: 261 EARALLARMKRDG-IAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVL 319
Query: 271 ITLYGQTGNLSEVYRI---WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES 327
Q G + E +R+ L A P+ ++Y ++ + A + +E
Sbjct: 320 AVGLCQAGKVDEAFRLKDEMERLSTALPDV--VTYNTLVDACFKWRCSSDALRLLEEMRD 377
Query: 328 GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKL 387
+ N+++ + KEG+LE A E+ G P+ T+ D Y + G++
Sbjct: 378 KGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAK 437
Query: 388 AVDCLEKAIDTG 399
A +++ + G
Sbjct: 438 AFTLMDEMVGKG 449
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 141/351 (40%), Gaps = 22/351 (6%)
Query: 107 DAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMT 166
D E LP+ +TY +L++ K + A LLE+M++ + + + N ++
Sbjct: 337 DEMERLSTALPDV----VTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVK 392
Query: 167 LYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA 226
K G E+ ++++ + PD TYN + A +++ A +++EM G +
Sbjct: 393 SLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKG-LK 451
Query: 227 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
D T + + + +E AE L R D +Y ++ Y + N R+
Sbjct: 452 MDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRL 511
Query: 287 WRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAY 344
W + R P+ + +Y +I+ L ++ L A E D N++I AY
Sbjct: 512 WDQMIERKLIPSIS--TYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAY 569
Query: 345 AKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGG 404
KEG LENA + P+ T + +G + A+ E ++ G+
Sbjct: 570 CKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKV-- 627
Query: 405 KWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 455
T T ++ + DVD A F DD+ V+ +P TY
Sbjct: 628 ----DVITYNTLIQSMCKVGDVDTALHFF-------DDMEVKGLQPDAFTY 667
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 132/329 (40%), Gaps = 3/329 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL+L E M +G+ T+ I + + K ++ A + E + + +TY +L++
Sbjct: 368 ALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLID 427
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
YCK KA L+++M L + N+++ K E ++ +P
Sbjct: 428 AYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVP 487
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D +Y M A + A R+ ++M + ++ +T++ L ++A
Sbjct: 488 DEVSYGTVMAAYFKEYNPEPALRLWDQMI-ERKLIPSISTYNTLIKGLCRMERLKEAIDK 546
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
L EL + D + Y +I Y + G+L +R + ++ ++ L
Sbjct: 547 LNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCL 606
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
L A K F+ W D+ N +I + K G ++ A + +G P+A T
Sbjct: 607 HGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFT 666
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAIDTGR 400
+ + G + A + L K D+G+
Sbjct: 667 YNVVLSALSEAGRSEEAHNMLHKLADSGK 695
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 48/106 (45%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+T +L+N C +KA L E E + +N+L+ K G + +
Sbjct: 595 VTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDD 654
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADW 229
M+ + PD++TYNV + AL+ A ++ ++ G+++ +
Sbjct: 655 MEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSF 700
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/370 (21%), Positives = 154/370 (41%), Gaps = 13/370 (3%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL L ME+R + V + +D + + IDAA + F ++ + +TY SL+
Sbjct: 202 ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 261
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK LL+ M + + + FN L+ ++ K G ++ + +EM I P
Sbjct: 262 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 321
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ TYN M N +S A +++ M R+ + + D TF++L Y + +
Sbjct: 322 NIITYNTLMDGYCMQNRLSEANNMLDLMVRN-KCSPDIVTFTSLIKGYCMVKRVDDGMKV 380
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVL 309
+ + R + Y L+ + Q+G + +++ + P+ ++Y ++ L
Sbjct: 381 FRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDV--MTYGILLDGL 438
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
+ L A + F++ + I + +I K G++E+A L +G PN
Sbjct: 439 CDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNV 498
Query: 370 KTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 429
T+ + + G + A L K + G P+ T T +R ++ D+ +
Sbjct: 499 MTYTVMISGLCKKGSLSEANILLRKMEEDGNA------PNDCTYNTLIRAHLRDGDLTAS 552
Query: 430 EGFLEILKKA 439
+E +K
Sbjct: 553 AKLIEEMKSC 562
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 122/273 (44%), Gaps = 7/273 (2%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY S++N C+ T A LL KM+E N+ +++++ + G + ++ +E
Sbjct: 184 VTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKE 243
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ I TYN +R L + ++++M + + TF+ L ++V+ G
Sbjct: 244 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR-EIVPNVITFNVLLDVFVKEG 302
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN---I 300
++A KE+ R ++ Y L+ Y LSE + L L N + +
Sbjct: 303 KLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM---LDLMVRNKCSPDIV 359
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
++ ++I+ +K + K F+ + ++++ + + G+++ AEEL +
Sbjct: 360 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 419
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
G P+ T+ I D NG ++ A++ E
Sbjct: 420 VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFE 452
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 77/385 (20%), Positives = 149/385 (38%), Gaps = 46/385 (11%)
Query: 114 VDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGH 173
++L + N T ++NC+C+ T A ++L K+ +L + FN+L+ G
Sbjct: 104 LELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGK 163
Query: 174 PEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFS 233
+ ++ M + PD TYN + + D S A ++ +M+ + V AD T+S
Sbjct: 164 VSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKME-ERNVKADVFTYS 222
Query: 234 NLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--R 291
+ G + A KE+E + + Y L+ + G ++ + + + R
Sbjct: 223 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 282
Query: 292 LAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLE 351
PN I++ ++ V V L A + +KE + + +I N ++ Y + RL
Sbjct: 283 EIVPNV--ITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLS 340
Query: 352 NAEELKERARR-----------------------------------RGADPNAKTWEIFS 376
A + + R RG NA T+ I
Sbjct: 341 EANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 400
Query: 377 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 436
+ ++G +KLA + ++ + G +P T + ++ A E L
Sbjct: 401 QGFCQSGKIKLAEELFQEMVSHG------VLPDVMTYGILLDGLCDNGKLEKALEIFEDL 454
Query: 437 KKAVDDLGVEVFEPLIRTYAAAGRT 461
+K+ DLG+ ++ +I G+
Sbjct: 455 QKSKMDLGIVMYTTIIEGMCKGGKV 479
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 87/210 (41%), Gaps = 46/210 (21%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVD------LPETSKNHLTYG 127
+K+ N+ KRG+ +I + + I AE F + LP+ +TYG
Sbjct: 377 GMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDV----MTYG 432
Query: 128 SLLNCYCKELMTEKAEALLEKMKE--LNLG-----------------------FSSMP-- 160
LL+ C EKA + E +++ ++LG F S+P
Sbjct: 433 ILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCK 492
Query: 161 --------FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA 212
+ +++ K G + ++++M+ P+ TYN +RA D++ +
Sbjct: 493 GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTAS 552
Query: 213 ERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
++IEEMK G +AD ++ + + + A
Sbjct: 553 AKLIEEMKSCG-FSADASSIKMVIDMLLSA 581
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 67/147 (45%), Gaps = 2/147 (1%)
Query: 59 GDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP- 117
G L L D AL++ E+++K M+ + ++ + K ++ A N F LP
Sbjct: 432 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 491
Query: 118 -ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK 176
N +TY +++ CK+ +A LL KM+E + +N+L+ + + G
Sbjct: 492 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTA 551
Query: 177 IPAIIQEMKASSIMPDSYTYNVWMRAL 203
+I+EMK+ D+ + + + L
Sbjct: 552 SAKLIEEMKSCGFSADASSIKMVIDML 578
>gi|168024876|ref|XP_001764961.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683770|gb|EDQ70177.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 743
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 109/256 (42%), Gaps = 1/256 (0%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y S++ Y K + +KA L+EKM+E +L S+ ++ ++ + G ++ + EMK
Sbjct: 189 YNSMITAYGKACLYDKAARLVEKMREEDLVPDSITYSCMIGACGRVGKLKEALSWFAEMK 248
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
I P S +N + D+ G RVI EMK+ G DW T Y AGL
Sbjct: 249 RLEIKPASSNFNTLISLYGKAKDVEGIVRVITEMKKYG-CKPDWQTLDAAVRAYDRAGLI 307
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
+ L L + + +Y L+ +Y + E RI+ ++R A ++
Sbjct: 308 KDVTEILNLLRDAGWVEETGSYGTLLHVYLKCNLPKEALRIFLAMRKAGMAPKEYMCRSL 367
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
I + + GA+ FKE + T + + MI Y G ++ AE L R
Sbjct: 368 ICTFRDAEMFDGAKSVFKEMQVAGVTPSLESSCTMIYVYGMNGDVKEAEGLFHSLRSSVK 427
Query: 366 DPNAKTWEIFSDYYLR 381
+ + + + Y+R
Sbjct: 428 RLDIFAYNVMINVYMR 443
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 136/327 (41%), Gaps = 20/327 (6%)
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
++AE L ++ +N ++ +Y + PE + + M+ ++PD+YTY+
Sbjct: 412 VKEAEGLFHSLRSSVKRLDIFAYNVMINVYMRCDMPEGAIKVYKLMEEDHLLPDAYTYHS 471
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
+R N + AE + + R+ V D + + + + E+ + +E+ +
Sbjct: 472 MLRMCQKCNLPAQAEEIYWRL-RNSDVELDEVMCNCVLNTCAKFLPLEEMHKLFQEMIDV 530
Query: 259 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLP 316
+ +I LYG+ G + E R ++L+LA F + IS+ ++ +D P
Sbjct: 531 GYVPYNITFNVMIDLYGKAG-MPE--RAHKALKLAQQFGSADKISFSTLVHAYAKKQDFP 587
Query: 317 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 376
E E ++ + N ++ AY K G++E ++ R G + ++ I
Sbjct: 588 NMEAALWEMQNAGYGSSLEAYNSILDAYGKAGQMEKVSDVLARMENSGMRMDLASYNILI 647
Query: 377 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 436
+ Y +N + +E T + +G VP T T +R + D A +
Sbjct: 648 NTYGKN----YMIAEMETLFRTMQEEG--VVPDRWTYNTIIRTYGFADYPDRAVYWF--- 698
Query: 437 KKAVDDLGVE----VFEPLIRTYAAAG 459
KA+ D G+ + L+ T+ AG
Sbjct: 699 -KAMQDAGISPDRVTYMILVSTFERAG 724
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 83/174 (47%), Gaps = 3/174 (1%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + +++ +L++ Y K+ EA L +M+ G S +NS++ Y K G EK+
Sbjct: 567 SADKISFSTLVHAYAKKQDFPNMEAALWEMQNAGYGSSLEAYNSILDAYGKAGQMEKVSD 626
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
++ M+ S + D +YN+ + I+ E + M+ +G V W T++ + Y
Sbjct: 627 VLARMENSGMRMDLASYNILINTYGKNYMIAEMETLFRTMQEEGVVPDRW-TYNTIIRTY 685
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 293
A ++A K +++ D Y L++ + + GN+ E R W LR++
Sbjct: 686 GFADYPDRAVYWFKAMQDAGISPDRVTYMILVSTFERAGNIDEAAR-W-CLRMS 737
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 80/167 (47%), Gaps = 8/167 (4%)
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE---KIPAIIQEM 184
+LN K L E+ L ++M ++ ++ FN ++ LY K G PE K + Q+
Sbjct: 506 CVLNTCAKFLPLEEMHKLFQEMIDVGYVPYNITFNVMIDLYGKAGMPERAHKALKLAQQF 565
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
++ D +++ + A A D E + EM+ G + ++++ Y +AG
Sbjct: 566 GSA----DKISFSTLVHAYAKKQDFPNMEAALWEMQNAG-YGSSLEAYNSILDAYGKAGQ 620
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 291
EK L +EN DL++Y LI YG+ ++E+ ++R+++
Sbjct: 621 MEKVSDVLARMENSGMRMDLASYNILINTYGKNYMIAEMETLFRTMQ 667
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 116/314 (36%), Gaps = 47/314 (14%)
Query: 148 KMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVN 207
KM+E FN+L+ +K + + Q M + ++P TY++ +
Sbjct: 37 KMQEDECEPDQYTFNTLIMSASKANYVDYATITFQLMLQTGVLPSILTYSMMLLLYQRHR 96
Query: 208 DISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAY 267
++ AE V M G A +S + ++Y GLFEK+E+ + E+ N D +
Sbjct: 97 KVAEAESVFSHMLNSGVQAV--VAYSVMIALYNREGLFEKSEQIVTEMRRNNVTPDRDNW 154
Query: 268 QFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES 327
+ YGQ G + E RI ++ + + + Y
Sbjct: 155 LKQLNTYGQQGKIEEAERIMDTVEESGMSLGLVGY------------------------- 189
Query: 328 GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKL 387
N MI AY K + A L E+ R P++ T+ R G +K
Sbjct: 190 ----------NSMITAYGKACLYDKAARLVEKMREEDLVPDSITYSCMIGACGRVGKLKE 239
Query: 388 AVDCLE--KAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGV 445
A+ K ++ P+S T + + + KDV+G + +KK
Sbjct: 240 ALSWFAEMKRLEIK--------PASSNFNTLISLYGKAKDVEGIVRVITEMKKYGCKPDW 291
Query: 446 EVFEPLIRTYAAAG 459
+ + +R Y AG
Sbjct: 292 QTLDAAVRAYDRAG 305
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 91/436 (20%), Positives = 164/436 (37%), Gaps = 82/436 (18%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ +TY ++ + ++A + +MK L + +S FN+L++LY K E I +I
Sbjct: 220 DSITYSCMIGACGRVGKLKEALSWFAEMKRLEIKPASSNFNTLISLYGKAKDVEGIVRVI 279
Query: 182 QEMKASSIMPDSYTYNVWMRAL---AAVNDIS---------------------------- 210
EMK PD T + +RA + D++
Sbjct: 280 TEMKKYGCKPDWQTLDAAVRAYDRAGLIKDVTEILNLLRDAGWVEETGSYGTLLHVYLKC 339
Query: 211 ----GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSA 266
A R+ M++ G ++ S L + +A +F+ A+ KE++ L +
Sbjct: 340 NLPKEALRIFLAMRKAGMAPKEYMCRS-LICTFRDAEMFDGAKSVFKEMQVAGVTPSLES 398
Query: 267 YQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP-GAEKCFKEW 325
+I +YG G++ E ++ SLR + +Y MI V + D+P GA K +K
Sbjct: 399 SCTMIYVYGMNGDVKEAEGLFHSLRSSVKRLDIFAYNVMINVYMRC-DMPEGAIKVYKLM 457
Query: 326 E-----SGCATY------------------------------DIRVTNVMIGAYAKEGRL 350
E TY D + N ++ AK L
Sbjct: 458 EEDHLLPDAYTYHSMLRMCQKCNLPAQAEEIYWRLRNSDVELDEVMCNCVLNTCAKFLPL 517
Query: 351 ENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSS 410
E +L + G P T+ + D Y + G + A L+ A G D
Sbjct: 518 EEMHKLFQEMIDVGYVPYNITFNVMIDLYGKAGMPERAHKALKLAQQFGSAD-------K 570
Query: 411 ETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPV--MLRR 468
+ T + + +++D E L ++ A +E + ++ Y AG+ V +L R
Sbjct: 571 ISFSTLVHAYAKKQDFPNMEAALWEMQNAGYGSSLEAYNSILDAYGKAGQMEKVSDVLAR 630
Query: 469 LKMEKVEVSEASKKLL 484
++ + + AS +L
Sbjct: 631 MENSGMRMDLASYNIL 646
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 43/99 (43%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
+Y L+N Y K M + E L M+E + +N+++ Y +P++ + M
Sbjct: 642 SYNILINTYGKNYMIAEMETLFRTMQEEGVVPDRWTYNTIIRTYGFADYPDRAVYWFKAM 701
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
+ + I PD TY + + +I A R M + G
Sbjct: 702 QDAGISPDRVTYMILVSTFERAGNIDEAARWCLRMSQAG 740
>gi|255661174|gb|ACU25756.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 426
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 121/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 6 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 65
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S PD YN + A +I EM+ G V D ++S L ++Y
Sbjct: 66 IFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAG-VTPDTASYSTLLTMY 124
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ +R
Sbjct: 125 VENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 245 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 284
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 109/221 (49%), Gaps = 20/221 (9%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML 276
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S + D Y + A ++ A+R++ E+KR + D I
Sbjct: 277 FQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAI-----HILA 331
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + +D++ ++ +I L Y + GN+ EV+ R L FP++
Sbjct: 332 GAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDEMRGLGY-FPDS 390
Query: 298 ANISYLNMIQVLVN----LKDLPGAEKCFKEW-ESGCATYD 333
N+I +++N L + A + E E GC D
Sbjct: 391 ------NVIALVLNAYGKLHEFDKANDVYMEMQEVGCVFSD 425
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 8/202 (3%)
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
++ PD YTY+ + A +++M++D RV D +SNL + + + K
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNM 305
A L+ DL AY +I ++G+ E + +R A P+TA SY +
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPDTA--SYSTL 120
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
+ + V K A F E D+ N+MI Y + G + A++L R+ G
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180
Query: 366 DPNAKTWEIFSDYYLRNGDMKL 387
+PN ++ Y GD +L
Sbjct: 181 EPNVVSYNTLLRVY---GDAEL 199
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 130/313 (41%), Gaps = 17/313 (5%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY +++ YCK ++A LL M L + + +N ++ + G E+ ++
Sbjct: 237 NVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVL 296
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EM PD TYN + V + A + EM R+G + D T+++L + +
Sbjct: 297 AEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNG-LPPDVVTYTSLINTMCK 355
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW-RSLRLAFPNTANI 300
AG +A ++ R + Y LI + Q G + E YRIW +R FP T +
Sbjct: 356 AGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTI-V 414
Query: 301 SYLNMIQVLVNLKDLPG----AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
+Y L+N + G A + E + D+ + +I + + L+ A ++
Sbjct: 415 TY----NALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQM 470
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTF 416
+G P+A T+ + A D ++ ++ +P T +
Sbjct: 471 NAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNK------SLLPDEFTYTSL 524
Query: 417 MRHFEQEKDVDGA 429
+ + +E D++ A
Sbjct: 525 INGYCKEGDLNEA 537
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/368 (20%), Positives = 140/368 (38%), Gaps = 34/368 (9%)
Query: 93 QAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKE- 151
+ I L ++ K + A+N DL E S + EK + +K+
Sbjct: 82 KCIALHILTKFKLYKTAQNLAQDLAENS-----------------VDEKGNYFFQCLKDT 124
Query: 152 -LNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV-NDI 209
SS F+ ++ + EK I+ K + MP +YN + ++ +
Sbjct: 125 YFMCNSSSAVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPV 184
Query: 210 SGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQF 269
AE+V EM G V+ + +++ L + AG E R +E+E ++ Y
Sbjct: 185 IFAEKVYREMIASG-VSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNT 243
Query: 270 LITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGC 329
+I Y + + E +++ RS+ L ++Y +I L + + E +
Sbjct: 244 VIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKG 303
Query: 330 ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 389
D N ++ Y K G A L R G P+ T+ + + G++ A+
Sbjct: 304 FAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAM 363
Query: 390 DCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFE 449
+ ++ G P+ T + + F Q +GF++ + D++ F
Sbjct: 364 EFFDQMHVRG------LRPNGVTYTSLINGFSQ-------KGFMDEAYRIWDEMIRSGFP 410
Query: 450 PLIRTYAA 457
P I TY A
Sbjct: 411 PTIVTYNA 418
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/302 (19%), Positives = 124/302 (41%), Gaps = 31/302 (10%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +LLN +C E+A LL M+ L + +++++ + + ++ + E
Sbjct: 414 VTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAE 473
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + PD+ TY+ ++ L ++ A + +EM + + D T+++L + Y + G
Sbjct: 474 MVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEM-LNKSLLPDEFTYTSLINGYCKEG 532
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTANIS 301
+A E+ + D Y LI + E R+ L + PN I+
Sbjct: 533 DLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPN--GIT 590
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I+ C+ + + +I + +G + A+++ E
Sbjct: 591 YDTLIE--------------------SCSDIEFKSVVALIKGFCMKGLMNEADQVFESMI 630
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
+R PN + + + R+G++ A ++ +D G ++P + TI ++
Sbjct: 631 KRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFG------FIPHTVTIIALVKALY 684
Query: 422 QE 423
E
Sbjct: 685 SE 686
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/314 (19%), Positives = 132/314 (42%), Gaps = 20/314 (6%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A+ L ME +G++ V + + + Q +D A ++ E S + +TY SL+
Sbjct: 432 AIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQ 491
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C++ +A L ++M +L + SL+ Y K G + + EM +P
Sbjct: 492 GLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLP 551
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWT-----------TFSNLASI-- 238
D+ TYNV + L A+R++ ++ D + T F ++ ++
Sbjct: 552 DTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIK 611
Query: 239 -YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL-RLAF-P 295
+ GL +A++ + + RN + + Y +I + + GN+ + +++++ + F P
Sbjct: 612 GFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIP 671
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEE 355
+T I + +++ L + ++ C D ++ ++ KEG ++
Sbjct: 672 HTVTI--IALVKALYSEGMDEQLNLVIRDILRSCKLSDAELSKALVQINHKEGNIDAVFN 729
Query: 356 LKERARRRGADPNA 369
L + G P+
Sbjct: 730 LLTEMAKDGFLPSG 743
>gi|410110103|gb|AFV61131.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
alba]
Length = 419
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 122/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K A
Sbjct: 12 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIA 71
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S PD YN + A +I EMK G V + +++S L ++Y
Sbjct: 72 IFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKTAG-VMPNTSSYSTLLTMY 130
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ +R
Sbjct: 131 VENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 190
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 191 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 250
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 251 MQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 290
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 91/211 (43%), Gaps = 8/211 (3%)
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+ EM+ ++ PD YTY+ + A +++M++D RV D +SNL +
Sbjct: 1 GLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIEL 59
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPN 296
+ + KA L+ DL AY +I ++G+ E + ++ A PN
Sbjct: 60 SRKLCDYSKAIAIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKTAGVMPN 119
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
T+ SY ++ + V K A F E D+ N+MI Y + G + A++L
Sbjct: 120 TS--SYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 177
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDMKL 387
R+ G +PN ++ Y GD +L
Sbjct: 178 FWGMRKMGIEPNVVSYNTLLRVY---GDAEL 205
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 101/194 (52%), Gaps = 15/194 (7%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 223 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAML 282
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S + D + + A ++ A+R++ E+KR + D T LA
Sbjct: 283 FQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD-TAIHILAG--- 338
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + +D++ ++ +I L Y + N+ EV+ R L FP++
Sbjct: 339 -AGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYXNVVEVFDKMRGLGY-FPDS 396
Query: 298 ANISYLNMIQVLVN 311
N+I V++N
Sbjct: 397 ------NVIAVVLN 404
>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/357 (20%), Positives = 149/357 (41%), Gaps = 46/357 (12%)
Query: 77 LSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYC 134
L ++M G++ + + L+ +D A F +PE N ++G L+ YC
Sbjct: 43 LCKDMVASGVSPETYTFNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYC 102
Query: 135 KELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSY 194
+ T K LL +M+ L + + +N+L++ + K G + ++ EM+ + PD
Sbjct: 103 RAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVV 162
Query: 195 TYNVWMRALAAVNDISGAERVIEEMKRD---GRVAADWTTFSNLASIYVEAG-------L 244
T+N + AL + + A R+ +M+ D G + T++ + + + G L
Sbjct: 163 TFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARAL 222
Query: 245 FEK----------------------------AERALKELENRNAHRDLSAYQFLITLYGQ 276
FEK A+ LKE+ + ++ +Y ++ +
Sbjct: 223 FEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCK 282
Query: 277 TGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPGAEKCFKE-WESGCATYD 333
G L + + R + + P+T ++Y ++ + + A +E GC+ +
Sbjct: 283 NGVLFDARMLMRLMTSSGVLPDT--VTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNN 340
Query: 334 IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
N+++ + KEGR+ AEEL ++ +G + T I D NG + A++
Sbjct: 341 -YTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIE 396
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 113/263 (42%), Gaps = 10/263 (3%)
Query: 146 LEKMKELNLGFSSMP-----FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 200
+ + K L F P +N L+ K G + + + ++M AS + P++YT+NV +
Sbjct: 4 ISQFKSLRFRFPENPPSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLI 63
Query: 201 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 260
L + A + ++M G ++ +F L Y AG K L E+
Sbjct: 64 GLLCDSGCLDDARELFDKMPEKGCEPNEY-SFGILVRGYCRAGFTSKGLELLGEMRRLGF 122
Query: 261 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 320
+ Y LI+ + + G + ++ +R + +++ I L + + A +
Sbjct: 123 SPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASR 182
Query: 321 CFKEWES----GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 376
F++ + G +I N+M+G + KEG LE A L E+ + N +++ I+
Sbjct: 183 IFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWL 242
Query: 377 DYYLRNGDMKLAVDCLEKAIDTG 399
+R G + A L++ +D G
Sbjct: 243 LGLVRIGKLLEAQLVLKEMVDMG 265
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/305 (18%), Positives = 121/305 (39%), Gaps = 26/305 (8%)
Query: 116 LPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
LP+T +TY +LL+ YC +A +L +M ++ N L+ K G
Sbjct: 302 LPDT----VTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRIS 357
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA--------- 226
+ ++Q+M + D+ T N+ + L + A ++ M G A
Sbjct: 358 EAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYI 417
Query: 227 -------------ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITL 273
D ++S + S +AG +A++ E+ +N D + Y I
Sbjct: 418 GLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHS 477
Query: 274 YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYD 333
+ + G +S +R+ + + N +Y ++I L + + E + D
Sbjct: 478 FCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPD 537
Query: 334 IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
+ + N ++ + + GR+++A + + ++G PN ++ I + + D + E
Sbjct: 538 VSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFE 597
Query: 394 KAIDT 398
A++
Sbjct: 598 IALNV 602
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 108/272 (39%), Gaps = 5/272 (1%)
Query: 116 LPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
PE + Y LL KE + L + M + + FN L+ L +G +
Sbjct: 14 FPENPPSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLD 73
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
+ +M P+ Y++ + +R S ++ EM+R G + + ++ L
Sbjct: 74 DARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLG-FSPNKVVYNTL 132
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR---- 291
S + + G + AE+ + E+ D+ + I+ +G + E RI+R ++
Sbjct: 133 ISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEV 192
Query: 292 LAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLE 351
L P I+Y M+ L A F++ + + N+ + + G+L
Sbjct: 193 LGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLL 252
Query: 352 NAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
A+ + + G +PN ++ I D +NG
Sbjct: 253 EAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNG 284
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 156/401 (38%), Gaps = 8/401 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCY 133
AL++ E M + G T + ++ + K I+ A + + + +T+ +L+N
Sbjct: 253 ALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYEEEGFCPDQVTFNALVNGL 312
Query: 134 CKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDS 193
C+ ++ +++ M E +NSL++ K G ++ I+ M + P++
Sbjct: 313 CRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNT 372
Query: 194 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 253
TYN + L N + A + + G V D TF++L E A +
Sbjct: 373 VTYNTLIGTLCKENHVEAATELARVLTSKG-VLPDVCTFNSLIQGLCLTSNREIAMELFE 431
Query: 254 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLK 313
E++ + D Y LI L E + + + L+ + Y +I L
Sbjct: 432 EMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNN 491
Query: 314 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 373
+ AE F + E + N +I K R+E A +L ++ G P+ T+
Sbjct: 492 RVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYT 551
Query: 374 IFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 433
Y+ + GD+K A D ++ G P T T + + VD A L
Sbjct: 552 TMLKYFCQQGDIKRAADIVQNMTLNG------CEPDIVTYGTLIGGLCKAGRVDVASKLL 605
Query: 434 EILKKAVDDLGVEVFEPLIRTYAAAGRTSPVM-LRRLKMEK 473
++ L + + P+I+ RT M L R MEK
Sbjct: 606 RSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEK 646
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 93/253 (36%), Gaps = 7/253 (2%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
T+ L+ CK A +LE M L F +LM + + E I + M
Sbjct: 201 TFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELM 260
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
S S + NV + L I A R I E + D TF+ L + G
Sbjct: 261 VESGCELTSVSVNVLVNGLCKEGRIEEALRFIYE---EEGFCPDQVTFNALVNGLCRTGH 317
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISY 302
++ + + + D+ Y LI+ + G + E I + R PNT ++Y
Sbjct: 318 IKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNT--VTY 375
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+I L + A + + S D+ N +I E A EL E +
Sbjct: 376 NTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKE 435
Query: 363 RGADPNAKTWEIF 375
+G DP+ T+ I
Sbjct: 436 KGCDPDEFTYSIL 448
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 86/213 (40%), Gaps = 5/213 (2%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
+N ++L K + + + +M A ++ PD T+N+ +RAL + + A ++E+M
Sbjct: 167 YNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMP 226
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
G + D TF+ L ++E E A R + + + L+ + G +
Sbjct: 227 NYG-LRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRI 285
Query: 281 SEVYRIWRSLRLAFPNTANISYL-NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
E R P+ + L N + ++K G E E G D+ N
Sbjct: 286 EEALRFIYEEEGFCPDQVTFNALVNGLCRTGHIKQ--GLEMMDFMLEKG-FELDVYTYNS 342
Query: 340 MIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
+I K G ++ A E+ R +PN T+
Sbjct: 343 LISGLCKLGEIDEAVEILHHMVSRDCEPNTVTY 375
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 102/260 (39%), Gaps = 44/260 (16%)
Query: 144 ALLEKMKELNLGFSSMPFNSLMTLYAKTGH--PEKIPAIIQEMKASSIMPDSYTYNVWMR 201
LL +M + F + YA + H E P + + ++ PD+ YNV +
Sbjct: 113 TLLRQMHSSKIPVDESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVALS 172
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 261
L N + E + +M D V D +TF+ L +A A L+++ N
Sbjct: 173 LLVKANKLKLVETLHSKMVADA-VPPDVSTFNILIRALCKAHQLRPAILMLEDMPN---- 227
Query: 262 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 321
YG LR P+ ++ ++Q + D+ GA +
Sbjct: 228 ------------YG--------------LR---PDEK--TFTTLMQGFIEEADVEGALR- 255
Query: 322 FKEW--ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 379
KE ESGC + V NV++ KEGR+E A L+ G P+ T+ +
Sbjct: 256 IKELMVESGCELTSVSV-NVLVNGLCKEGRIEEA--LRFIYEEEGFCPDQVTFNALVNGL 312
Query: 380 LRNGDMKLAVDCLEKAIDTG 399
R G +K ++ ++ ++ G
Sbjct: 313 CRTGHIKQGLEMMDFMLEKG 332
Score = 38.9 bits (89), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 39/212 (18%), Positives = 84/212 (39%), Gaps = 2/212 (0%)
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
+P ++ + + L D S A + + +A + F L AG F+
Sbjct: 53 LPPDFSPSQLLDLLRRQPDSSSALSLFQWASAQPNYSAHPSVFHELLRQLARAGSFDSML 112
Query: 250 RALKELENRNAHRDLSAYQFLITLYGQTGNL-SEVYRIWRSLRLAFPNTANISYLNM-IQ 307
L+++ + D S + + Y + +L +E+ ++ + F + + N+ +
Sbjct: 113 TLLRQMHSSKIPVDESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVALS 172
Query: 308 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
+LV L E + + D+ N++I A K +L A + E G P
Sbjct: 173 LLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRP 232
Query: 368 NAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ KT+ ++ D++ A+ E +++G
Sbjct: 233 DEKTFTTLMQGFIEEADVEGALRIKELMVESG 264
>gi|255661168|gb|ACU25753.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 352
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 122/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 6 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 65
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S PD YN + A +I EM+ G V + T++S L ++Y
Sbjct: 66 IFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAG-VTPNTTSYSTLLTMY 124
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ +R
Sbjct: 125 VENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 245 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 284
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 8/202 (3%)
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
++ PD YTY+ + A +++M++D RV D +SNL + + + K
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNM 305
A L+ DL AY +I ++G+ E + +R A PNT SY +
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTT--SYSTL 120
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
+ + V K A F E D+ N+MI Y + G + A++L R+ G
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180
Query: 366 DPNAKTWEIFSDYYLRNGDMKL 387
+PN ++ Y GD +L
Sbjct: 181 EPNVVSYNTLLRVY---GDAEL 199
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 85/188 (45%), Gaps = 1/188 (0%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
+ N +Y +LL Y + +A ++ +M+E+ N ++ +Y + G ++
Sbjct: 110 VTPNTTSYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEAD 169
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+ M+ I P+ +YN +R A + M+R + + T++++ I
Sbjct: 170 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN-IEQNVVTYNSMMMI 228
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
Y + EKA ++E++NR + Y +I+++G+ G L +++ LR + +
Sbjct: 229 YGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDID 288
Query: 299 NISYLNMI 306
+ Y MI
Sbjct: 289 QVLYQTMI 296
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 61/108 (56%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML 276
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAAD 228
Q++++S + D Y + A ++ A+R++ E+KR + D
Sbjct: 277 FQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 324
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 100/225 (44%), Gaps = 3/225 (1%)
Query: 69 KLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTY 126
KL+ A L M G+ + + L + + + A + F ++ E + T
Sbjct: 93 KLFREARSLISEMRTAGVTPNTTSYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTC 152
Query: 127 GSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKA 186
+++ Y + M ++A+ L M+++ + + + +N+L+ +Y + + + M+
Sbjct: 153 NIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR 212
Query: 187 SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE 246
+I + TYN M + A +I+EM+ G + + T+S + SI+ + G +
Sbjct: 213 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRG-IEPNSITYSTIISIWGKVGKLD 271
Query: 247 KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 291
+A ++L + D YQ +I Y + G ++ R+ L+
Sbjct: 272 RAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELK 316
>gi|168022838|ref|XP_001763946.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684951|gb|EDQ71350.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 727
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 141/327 (43%), Gaps = 8/327 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNH--LTYGSLLN 131
A+ E ME G+ + + + ++AAE +F + NH Y S+++
Sbjct: 177 AVSCVEEMEIEGIFPNAATFSAIISGYGSSGNVEAAEKWFQRSVSENWNHNVAIYSSIIH 236
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKA---SS 188
YCK E+AEAL+ M+E L + +N LM YA+ + + ++KA +
Sbjct: 237 AYCKAGNMERAEALVADMEEQGLEATLGLYNILMDGYARCHIEAQCLNVFHKLKARIDTG 296
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
+ P + TY + + + A +EMK G + + T+S L YV+ G F A
Sbjct: 297 LSPTAVTYGCLINLYTKLGKMMKALEFCKEMKAQG-ITLNRNTYSMLVDGYVQLGDFANA 355
Query: 249 ERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQV 308
+++ D Y L+ + ++ ++ ++ ++ + +Y+ +I
Sbjct: 356 FSVFEDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRGCSPTIQTYITIIDG 415
Query: 309 LVNLKDLPGAEKCFKEWE-SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
+ D+ A K E + +GC + NV++ + G+++ A + + G P
Sbjct: 416 FMKTGDVRMAYKTVSEMKLAGCRP-NATTYNVIMHNLVQLGQIDRAASVIDEMELAGVQP 474
Query: 368 NAKTWEIFSDYYLRNGDMKLAVDCLEK 394
N +++ + G++ LA CL++
Sbjct: 475 NFRSYTTLMQGFASIGEIGLAFKCLKR 501
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/384 (21%), Positives = 157/384 (40%), Gaps = 19/384 (4%)
Query: 77 LSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE-----TSKNHLTYGSLLN 131
L +ME++G+ T+ I +D A+ N F L S +TYG L+N
Sbjct: 250 LVADMEEQGLEATLGLYNILMDGYARCHIEAQCLNVFHKLKARIDTGLSPTAVTYGCLIN 309
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
Y K KA ++MK + + ++ L+ Y + G ++ ++M + I P
Sbjct: 310 LYTKLGKMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQLGDFANAFSVFEDMSEAGIEP 369
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D TYN+ ++A ++ A +++ MK G + T+ + +++ G A +
Sbjct: 370 DWVTYNILLKAFCKSRQMTRAIQLLGRMKTRG-CSPTIQTYITIIDGFMKTGDVRMAYKT 428
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
+ E++ + + Y ++ Q G + + + LA SY ++Q +
Sbjct: 429 VSEMKLAGCRPNATTYNVIMHNLVQLGQIDRAASVIDEMELAGVQPNFRSYTTLMQGFAS 488
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+ ++ A KC K I ++ A K GR++NA + E G N
Sbjct: 489 IGEIGLAFKCLKRVNEITQKPPIISYASLLKACCKAGRMQNAIAVTEEMAFAGVPMNNYI 548
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG 431
+ D + + GDM A ++K G + P + +F+ + D+ A
Sbjct: 549 FNTLLDGWAQRGDMWEAYGIMQKMRQEG------FTPDIHSYTSFVNACCKAGDMQKATE 602
Query: 432 FLEILKKAVDDLGVEVFEPLIRTY 455
+E +K+ DL +P ++TY
Sbjct: 603 TIEEMKQ--QDL-----QPNLQTY 619
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 126/304 (41%), Gaps = 3/304 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
AL+ + M+ +G+ + ++ +D ++ A + F D+ E + +TY LL
Sbjct: 320 ALEFCKEMKAQGITLNRNTYSMLVDGYVQLGDFANAFSVFEDMSEAGIEPDWVTYNILLK 379
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+CK +A LL +MK + + +++ + KTG + EMK + P
Sbjct: 380 AFCKSRQMTRAIQLLGRMKTRGCSPTIQTYITIIDGFMKTGDVRMAYKTVSEMKLAGCRP 439
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
++ TYNV M L + I A VI+EM+ G V ++ +++ L + G A +
Sbjct: 440 NATTYNVIMHNLVQLGQIDRAASVIDEMELAG-VQPNFRSYTTLMQGFASIGEIGLAFKC 498
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
LK + + +Y L+ + G + + + A N + ++
Sbjct: 499 LKRVNEITQKPPIISYASLLKACCKAGRMQNAIAVTEEMAFAGVPMNNYIFNTLLDGWAQ 558
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
D+ A ++ T DI + A K G ++ A E E +++ PN +T
Sbjct: 559 RGDMWEAYGIMQKMRQEGFTPDIHSYTSFVNACCKAGDMQKATETIEEMKQQDLQPNLQT 618
Query: 372 WEIF 375
+ I
Sbjct: 619 YTIL 622
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/376 (18%), Positives = 146/376 (38%), Gaps = 53/376 (14%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y L++ Y K A EKM+ + S +N+L+ Y + + + ++EM+
Sbjct: 126 YALLIHYYGKRGDKRGARVTFEKMRAAGIDSSVHAYNNLIRAYIMAQNLQGAVSCVEEME 185
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADW----TTFSNLASIYVE 241
I P++ T++ + + ++ AE+ + V+ +W +S++ Y +
Sbjct: 186 IEGIFPNAATFSAIISGYGSSGNVEAAEKWFQR-----SVSENWNHNVAIYSSIIHAYCK 240
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQF-------------------------------- 269
AG E+AE + ++E + L Y
Sbjct: 241 AGNMERAEALVADMEEQGLEATLGLYNILMDGYARCHIEAQCLNVFHKLKARIDTGLSPT 300
Query: 270 ------LITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 323
LI LY + G + + + ++ +Y ++ V L D A F+
Sbjct: 301 AVTYGCLINLYTKLGKMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQLGDFANAFSVFE 360
Query: 324 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
+ D N+++ A+ K ++ A +L R + RG P +T+ D +++ G
Sbjct: 361 DMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRGCSPTIQTYITIIDGFMKTG 420
Query: 384 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDL 443
D+++A K + + G + P++ T M + Q +D A ++ ++ A
Sbjct: 421 DVRMAY----KTVSEMKLAGCR--PNATTYNVIMHNLVQLGQIDRAASVIDEMELAGVQP 474
Query: 444 GVEVFEPLIRTYAAAG 459
+ L++ +A+ G
Sbjct: 475 NFRSYTTLMQGFASIG 490
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 1/149 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
++Y SLL CK + A A+ E+M + ++ FN+L+ +A+ G + I+Q+
Sbjct: 512 ISYASLLKACCKAGRMQNAIAVTEEMAFAGVPMNNYIFNTLLDGWAQRGDMWEAYGIMQK 571
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ PD ++Y ++ A D+ A IEEMK+ + + T++ L +
Sbjct: 572 MRQEGFTPDIHSYTSFVNACCKAGDMQKATETIEEMKQQD-LQPNLQTYTILIHGWTSVS 630
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLIT 272
EKA E++ D Y ++T
Sbjct: 631 HPEKALICYDEMKAAGLIPDKPLYYCIVT 659
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 119/274 (43%), Gaps = 3/274 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ +TYG +LN CK + A L KM+E N+ S + ++ ++ K G + ++
Sbjct: 238 DEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLF 297
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGR-VAADWTTFSNLASIYV 240
EM+ I D TY+ + L +++ EM GR + D TFS L ++V
Sbjct: 298 NEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI--GRNIIPDVVTFSALIDVFV 355
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
+ G +A+ E+ R D Y LI + + L E +++ + +
Sbjct: 356 KEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIV 415
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
+Y +I K + + F+E S + N ++ + + G+L A+EL +
Sbjct: 416 TYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEM 475
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
RG P+ T+ I D NG++ A++ EK
Sbjct: 476 VSRGVPPSVVTYGILLDGLCDNGELNKALEIFEK 509
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 148/358 (41%), Gaps = 38/358 (10%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
AL L ME+R + +V +I +D + K D A + F +++ + +TY SL+
Sbjct: 258 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 317
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C + + +L +M N+ + F++L+ ++ K G + + EM I P
Sbjct: 318 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 377
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D+ TYN + N + A ++ + M G D T+S L + Y +A + R
Sbjct: 378 DTITYNSLIDGFCKENCLHEANQMFDLMVSKG-CEPDIVTYSILINSYCKAKRVDDGMRL 436
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
+E+ ++ + Y L+ + Q+G L+ +++ + + ++Y ++ L +
Sbjct: 437 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 496
Query: 312 LKDLPGAEKCFKE-----------------------------WESGCATYD------IRV 336
+L A + F++ W C+ D +
Sbjct: 497 NGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVT 556
Query: 337 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
NVMIG K+G L A+ L + + G P+ T+ I +L + +V+ +E+
Sbjct: 557 YNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEE 614
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/381 (20%), Positives = 151/381 (39%), Gaps = 48/381 (12%)
Query: 117 PETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK 176
P+T +T+ +L+N +C E +A AL+++M E+ + ++L+ G +
Sbjct: 167 PDT----ITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSE 222
Query: 177 IPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA--------ER-----------VIE 217
+I M PD TY + L + + A ER VI+
Sbjct: 223 ALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVID 282
Query: 218 EMKRDGR---------------VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 262
+ +DG + AD T+S+L G ++ + L+E+ RN
Sbjct: 283 SLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP 342
Query: 263 DLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEK 320
D+ + LI ++ + G L E ++ + R P+T I+Y ++I L A +
Sbjct: 343 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT--ITYNSLIDGFCKENCLHEANQ 400
Query: 321 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 380
F S DI +++I +Y K R+++ L +G PN T+ +
Sbjct: 401 MFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFC 460
Query: 381 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 440
++G + A + ++ + G PS T + +++ A E ++K+
Sbjct: 461 QSGKLNAAKELFQEMVSRG------VPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 514
Query: 441 DDLGVEVFEPLIRTYAAAGRT 461
LG+ ++ +I A +
Sbjct: 515 MTLGIGIYNIIIHGMCNASKV 535
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 111/271 (40%), Gaps = 8/271 (2%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
T ++NCYC++ A ++L + +L ++ F++L+ + G + A++ M
Sbjct: 136 TMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRM 195
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
PD T + + L +S A +I+ M G D T+ + + ++G
Sbjct: 196 VEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYG-FQPDEVTYGPVLNRLCKSGN 254
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
A +++E RN + Y +I + G+ + ++ + + ++Y +
Sbjct: 255 SALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSS 314
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+I L N K +E D+ + +I + KEG+L A+EL RG
Sbjct: 315 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG 374
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 395
P+ T+ D + + +CL +A
Sbjct: 375 IAPDTITYNSLIDGFCKE-------NCLHEA 398
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 110/262 (41%), Gaps = 7/262 (2%)
Query: 117 PETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK 176
P+T +TY SL++ +CKE +A + + M + ++ L+ Y K +
Sbjct: 377 PDT----ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDD 432
Query: 177 IPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLA 236
+ +E+ + ++P++ TYN + ++ A+ + +EM G V T+ L
Sbjct: 433 GMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG-VPPSVVTYGILL 491
Query: 237 SIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPN 296
+ G KA ++++ + Y +I + + + ++ SL
Sbjct: 492 DGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVK 551
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEE 355
++Y MI L L A+ F++ E GC T D N++I A+ L ++ E
Sbjct: 552 PDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC-TPDDFTYNILIRAHLGGSGLISSVE 610
Query: 356 LKERARRRGADPNAKTWEIFSD 377
L E + G ++ T ++ D
Sbjct: 611 LIEEMKVCGFSADSSTIKMVID 632
>gi|297738294|emb|CBI27495.3| unnamed protein product [Vitis vinifera]
Length = 552
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/332 (19%), Positives = 149/332 (44%), Gaps = 10/332 (3%)
Query: 72 YPALKLSENMEKRGMNKTVSDQAIHLDLV---AKVQGIDAAENYFVDLPETS--KNHLTY 126
+ AL+ +M K+G+ + D A++ L+ A ++ + AE F + E ++ +
Sbjct: 214 FEALEFFRDMTKKGI---LEDSAVYSSLICSFASIREVKVAEELFREAEEKKILRDPEVF 270
Query: 127 GSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKA 186
L+ Y +E + E+ +++ MK + + S F +++ +AK + E+
Sbjct: 271 LKLVLMYVEEGLMERTLEIVKAMKNVEIRVSDCIFCAIVNGFAKKRGLRAAAKVYDELIL 330
Query: 187 SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE 246
P TY + + S AE V EM++ G +S++ +Y + G
Sbjct: 331 QGCEPGQVTYASIINVYCRMELYSKAEMVFSEMEKKG-FNKCVVAYSSMVVMYGKTGRLR 389
Query: 247 KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI 306
+A R + +++ R ++ Y L+ ++G+ NL +V ++W+ ++ +SY ++I
Sbjct: 390 EAMRLVAKMKERGCEPNVWVYNSLMDMHGRVKNLRQVEKLWKEMKRKKVVPDRVSYTSVI 449
Query: 307 QVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD 366
D + + E+ D + +M+G ++K GR++ +L + + G
Sbjct: 450 SAYSKAGDFETCMRFYHEFRMNGGVIDRVIAGIMVGIFSKSGRVDELVKLLQDMKTEGTG 509
Query: 367 PNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 398
+ + + + LR+ +++ L+++ DT
Sbjct: 510 LDERLYRSALN-ALRDAGLQMQARWLQESFDT 540
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 145/353 (41%), Gaps = 13/353 (3%)
Query: 56 WEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDL---VAKVQGIDAAENY 112
+ + + K+RD Y + L + E R ++ + I+ L + K+ A +
Sbjct: 163 YRIMEAYIKIRD---YEKVVTLFQEFESRKIDSSPFSTQIYRILCESLGKMGRAFEALEF 219
Query: 113 FVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAK 170
F D+ + ++ Y SL+ + + AE L + +E + F L+ +Y +
Sbjct: 220 FRDMTKKGILEDSAVYSSLICSFASIREVKVAEELFREAEEKKILRDPEVFLKLVLMYVE 279
Query: 171 TGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWT 230
G E+ I++ MK I + + A + A +V +E+ G
Sbjct: 280 EGLMERTLEIVKAMKNVEIRVSDCIFCAIVNGFAKKRGLRAAAKVYDELILQG-CEPGQV 338
Query: 231 TFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
T++++ ++Y L+ KAE E+E + ++ + AY ++ +YG+TG L E R+ +
Sbjct: 339 TYASIINVYCRMELYSKAEMVFSEMEKKGFNKCVVAYSSMVVMYGKTGRLREAMRLVAKM 398
Query: 291 --RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEG 348
R PN Y +++ + +K+L EK +KE + D +I AY+K G
Sbjct: 399 KERGCEPNVW--VYNSLMDMHGRVKNLRQVEKLWKEMKRKKVVPDRVSYTSVISAYSKAG 456
Query: 349 RLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRG 401
E R G + I + ++G + V L+ G G
Sbjct: 457 DFETCMRFYHEFRMNGGVIDRVIAGIMVGIFSKSGRVDELVKLLQDMKTEGTG 509
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/301 (20%), Positives = 115/301 (38%), Gaps = 39/301 (12%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
L + S + Y K M A+ ++MK + +S + +M Y K EK+ + QE
Sbjct: 125 LVFNSAMGGYNKLHMFSSTIAVYDRMKSAGVVPNSESYYRIMEAYIKIRDYEKVVTLFQE 184
Query: 184 --------------------------------------MKASSIMPDSYTYNVWMRALAA 205
M I+ DS Y+ + + A+
Sbjct: 185 FESRKIDSSPFSTQIYRILCESLGKMGRAFEALEFFRDMTKKGILEDSAVYSSLICSFAS 244
Query: 206 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 265
+ ++ AE + E + + ++ D F L +YVE GL E+ +K ++N
Sbjct: 245 IREVKVAEELFREAE-EKKILRDPEVFLKLVLMYVEEGLMERTLEIVKAMKNVEIRVSDC 303
Query: 266 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 325
+ ++ + + L +++ L L ++Y ++I V ++ AE F E
Sbjct: 304 IFCAIVNGFAKKRGLRAAAKVYDELILQGCEPGQVTYASIINVYCRMELYSKAEMVFSEM 363
Query: 326 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 385
E + + M+ Y K GRL A L + + RG +PN + D + R ++
Sbjct: 364 EKKGFNKCVVAYSSMVVMYGKTGRLREAMRLVAKMKERGCEPNVWVYNSLMDMHGRVKNL 423
Query: 386 K 386
+
Sbjct: 424 R 424
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/394 (21%), Positives = 155/394 (39%), Gaps = 43/394 (10%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL+L + ME++G V +D + K + + A ++F ++ + + TY S+L+
Sbjct: 64 ALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILH 123
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C +A +L ++M E N+ + + F L+ K + + + M + P
Sbjct: 124 GFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEP 183
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDG---------------------------- 223
D YTYN + + + + A+++ M R G
Sbjct: 184 DVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLL 243
Query: 224 ------RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQT 277
+ D T+S L + + G ++A+ LKE+ + +L Y ++ +
Sbjct: 244 AEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKH 303
Query: 278 GNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVT 337
G+L E + + ++++ + Y +I+ + L A + F +
Sbjct: 304 GHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTY 363
Query: 338 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
VMI K G A EL G PN+ T+ + +LRNGD AV +E+ +
Sbjct: 364 TVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVG 423
Query: 398 TG-RGDGGKW------VPSSETIRTFMRHFEQEK 424
G D + S E I FMR Q++
Sbjct: 424 KGFSADSSTFRMLSDLESSDEIISQFMRGSSQDR 457
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/338 (20%), Positives = 138/338 (40%), Gaps = 22/338 (6%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +++N CK T A LL+KM+E + + +N+++ K + E
Sbjct: 46 ITYSTIINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSE 105
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M I PD +TY+ + + ++ A + ++M + V + TF+ L +
Sbjct: 106 MVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQM-VERNVIPNKVTFTILIDGLCKKR 164
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANIS 301
+ +A + + + D+ Y L+ Y + E +++ + + PN S
Sbjct: 165 MISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVR--S 222
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I + A+ E T DI + ++ + + GR + A+EL +
Sbjct: 223 YNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMC 282
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPS--SETIRTFMRH 419
G PN T+ I D ++G + A + L KA+ + + ++ + E + TF
Sbjct: 283 SYGLLPNLITYSIVLDGLCKHGHLDEAFELL-KAMQESKIEPNIFIYTILIEGMCTF--- 338
Query: 420 FEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAA 457
G LE ++ +L V+ +P + TY
Sbjct: 339 -----------GKLEAARELFSNLFVKGIQPTVVTYTV 365
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/281 (18%), Positives = 110/281 (39%), Gaps = 21/281 (7%)
Query: 149 MKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVND 208
M +L L + + FN+L++ + EM PD TY+ + L + +
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60
Query: 209 ISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQ 268
+ A +++++M+ G + ++ + + L +A E+ D+ Y
Sbjct: 61 TTMALQLLKKMEEKG-CKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYS 119
Query: 269 FLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE 326
++ + G ++E +++ + R PN +++ +I L + + A F+
Sbjct: 120 SILHGFCNLGRVNEATSLFKQMVERNVIPN--KVTFTILIDGLCKKRMISEAWLVFETMT 177
Query: 327 SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 386
D+ N ++ Y +++ A++L R+G PN +++ I + + ++G
Sbjct: 178 EKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSG--- 234
Query: 387 LAVDCLEKAIDTGRG-----DGGKWVPSSETIRTFMRHFEQ 422
ID +G P T T MR F Q
Sbjct: 235 --------RIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQ 267
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 119/274 (43%), Gaps = 3/274 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ +TYG +LN CK + A L KM+E N+ S + ++ ++ K G + ++
Sbjct: 209 DEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLF 268
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGR-VAADWTTFSNLASIYV 240
EM+ I D TY+ + L +++ EM GR + D TFS L ++V
Sbjct: 269 NEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI--GRNIIPDVVTFSALIDVFV 326
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
+ G +A+ E+ R D Y LI + + L E +++ + +
Sbjct: 327 KEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIV 386
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
+Y +I K + + F+E S + N ++ + + G+L A+EL +
Sbjct: 387 TYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEM 446
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
RG P+ T+ I D NG++ A++ EK
Sbjct: 447 VSRGVPPSVVTYGILLDGLCDNGELNKALEIFEK 480
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 148/358 (41%), Gaps = 38/358 (10%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
AL L ME+R + +V +I +D + K D A + F +++ + +TY SL+
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C + + +L +M N+ + F++L+ ++ K G + + EM I P
Sbjct: 289 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 348
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D+ TYN + N + A ++ + M G D T+S L + Y +A + R
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMFDLMVSKG-CEPDIVTYSILINSYCKAKRVDDGMRL 407
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
+E+ ++ + Y L+ + Q+G L+ +++ + + ++Y ++ L +
Sbjct: 408 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 467
Query: 312 LKDLPGAEKCFKE-----------------------------WESGCATYD------IRV 336
+L A + F++ W C+ D +
Sbjct: 468 NGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVT 527
Query: 337 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
NVMIG K+G L A+ L + + G P+ T+ I +L + +V+ +E+
Sbjct: 528 YNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEE 585
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/381 (20%), Positives = 151/381 (39%), Gaps = 48/381 (12%)
Query: 117 PETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK 176
P+T +T+ +L+N +C E +A AL+++M E+ + ++L+ G +
Sbjct: 138 PDT----ITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSE 193
Query: 177 IPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA--------ER-----------VIE 217
+I M PD TY + L + + A ER VI+
Sbjct: 194 ALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVID 253
Query: 218 EMKRDGR---------------VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 262
+ +DG + AD T+S+L G ++ + L+E+ RN
Sbjct: 254 SLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP 313
Query: 263 DLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEK 320
D+ + LI ++ + G L E ++ + R P+T I+Y ++I L A +
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT--ITYNSLIDGFCKENCLHEANQ 371
Query: 321 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 380
F S DI +++I +Y K R+++ L +G PN T+ +
Sbjct: 372 MFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFC 431
Query: 381 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 440
++G + A + ++ + G PS T + +++ A E ++K+
Sbjct: 432 QSGKLNAAKELFQEMVSRG------VPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 485
Query: 441 DDLGVEVFEPLIRTYAAAGRT 461
LG+ ++ +I A +
Sbjct: 486 MTLGIGIYNIIIHGMCNASKV 506
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 128/320 (40%), Gaps = 14/320 (4%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
T ++NCYC++ A ++L + +L ++ F++L+ + G + A++ M
Sbjct: 107 TMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRM 166
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
PD T + + L +S A +I+ M G D T+ + + ++G
Sbjct: 167 VEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYG-FQPDEVTYGPVLNRLCKSGN 225
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
A +++E RN + Y +I + G+ + ++ + + ++Y +
Sbjct: 226 SALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSS 285
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+I L N K +E D+ + +I + KEG+L A+EL RG
Sbjct: 286 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG 345
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA---IDTGRGDGGKWVPSSETIRTFMRHFE 421
P+ T+ D + + +CL +A D G + P T + +
Sbjct: 346 IAPDTITYNSLIDGFCKE-------NCLHEANQMFDLMVSKGCE--PDIVTYSILINSYC 396
Query: 422 QEKDV-DGAEGFLEILKKAV 440
+ K V DG F EI K +
Sbjct: 397 KAKRVDDGMRLFREISSKGL 416
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 109/259 (42%), Gaps = 3/259 (1%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
+ + +TY SL++ +CKE +A + + M + ++ L+ Y K +
Sbjct: 347 APDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMR 406
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+ +E+ + ++P++ TYN + ++ A+ + +EM G V T+ L
Sbjct: 407 LFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG-VPPSVVTYGILLDGL 465
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
+ G KA ++++ + Y +I + + + ++ SL
Sbjct: 466 CDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDV 525
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
++Y MI L L A+ F++ E GC T D N++I A+ L ++ EL E
Sbjct: 526 VTYNVMIGGLCKKGSLSEADMLFRKMKEDGC-TPDDFTYNILIRAHLGGSGLISSVELIE 584
Query: 359 RARRRGADPNAKTWEIFSD 377
+ G ++ T ++ D
Sbjct: 585 EMKVCGFSADSSTIKMVID 603
>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/384 (19%), Positives = 164/384 (42%), Gaps = 17/384 (4%)
Query: 56 WEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVD 115
+ + L L K Y + L + E G+ + +I ++ + I A + F +
Sbjct: 62 FLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSVFAN 121
Query: 116 LPETS--KNHLTYGSLLN--CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKT 171
+ + N +T +L+ C+C E+ ++A +K+ + + +L+ K
Sbjct: 122 ILKRGYHPNAITLNTLIKGLCFCGEI--KRALHFHDKVVAQGFQLDQVSYGTLINGLCKA 179
Query: 172 GHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTT 231
G + + ++++++ S+ PD Y + L + A + EM G ++ + T
Sbjct: 180 GETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKG-ISPNVFT 238
Query: 232 FSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 291
++ L + G ++A L E++ +N + D+ + LI + G + E ++ ++
Sbjct: 239 YTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMK 298
Query: 292 L--AFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGR 349
FPN ++Y ++I L L A K+ + ++ +++ A K GR
Sbjct: 299 HKNMFPNI--VTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGR 356
Query: 350 LENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPS 409
LENA++ + +G N +T+ + + + G +D K +G +P+
Sbjct: 357 LENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKM------EGKGCMPN 410
Query: 410 SETIRTFMRHFEQEKDVDGAEGFL 433
+ T +T + ++ + D AE FL
Sbjct: 411 AITFKTIICALLEKDENDKAEKFL 434
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 113/282 (40%), Gaps = 7/282 (2%)
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
P++ T N ++ L +I A +++ G D ++ L + +AG + R
Sbjct: 129 PNAITLNTLIKGLCFCGEIKRALHFHDKVVAQG-FQLDQVSYGTLINGLCKAGETKAVAR 187
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
L++LE + DL Y +I + L + ++ + + + +Y +I
Sbjct: 188 LLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGFC 247
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
+ +L A E + D+ N++I A AKEG+++ A L E + + PN
Sbjct: 248 IMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIV 307
Query: 371 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 430
T+ D +N ++ A+ +K + G P+ + + + ++ A+
Sbjct: 308 TYTSLIDGLCKNHHLERAIALCKKMKEQG------IQPNVYSYTILLDALCKGGRLENAK 361
Query: 431 GFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKME 472
F + L L V + +I AG VM + KME
Sbjct: 362 QFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKME 403
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 129/307 (42%), Gaps = 41/307 (13%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI---P 178
N T+ +N CK KAE ++E +K + + +N+L+ + K G K+
Sbjct: 199 NLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRAD 258
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG--------------- 223
AI++EM A+ I P+ T+N + ++ A+ EEM+R G
Sbjct: 259 AILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGL 318
Query: 224 -------RVAADW------------TTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 264
A W TF+ L + + + + ++A + ++ ++ +
Sbjct: 319 SNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNA 378
Query: 265 SAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 322
+ +I + + G + E + + S+ FPN + +Y +I L +++ A+K
Sbjct: 379 ITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVS--TYNCLIAGLCRNQNVRAAKKLL 436
Query: 323 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 382
E E+ D+ N++IG + K+G AE+L G PN T+ D Y
Sbjct: 437 NEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCME 496
Query: 383 GDMKLAV 389
G++K A+
Sbjct: 497 GNLKAAL 503
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 113/253 (44%), Gaps = 36/253 (14%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +T+ +L+N +CK+ M ++A L + + E +L +++ FN+++ + K G E+ A+
Sbjct: 342 NIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALH 401
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M I P+ TYN + L ++ A++++ EM+ + + AD T++ L + +
Sbjct: 402 NSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEME-NYELKADVVTYNILIGGWCK 460
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G KAE+ L E+ N + Y L+ Y GNL ++ +
Sbjct: 461 DGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQME---------- 510
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
KE + ++ NV+I + K G+LE+A L
Sbjct: 511 ---------------------KEGKRA----NVVTYNVLIKGFCKTGKLEDANRLLNEML 545
Query: 362 RRGADPNAKTWEI 374
+G +PN T+++
Sbjct: 546 EKGLNPNRTTYDV 558
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 111/306 (36%), Gaps = 41/306 (13%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N L L+ Y L A + ++++ S N L++ K ++ +
Sbjct: 129 NALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVY 188
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR--------------DG---- 223
+EM I P+ T+N+++ L ++ AE VIE++K DG
Sbjct: 189 KEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKK 248
Query: 224 -------------------RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 264
++ + TF+ L + + A+ A +E++ + ++
Sbjct: 249 GSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNI 308
Query: 265 SAYQFLITLYGQTGNLSEVYRIW-RSLRLAF-PNTANISYLNMIQVLVNLKDLPGAEKCF 322
Y LI G L E +W + + L PN +++ +I K + A K F
Sbjct: 309 VTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNI--VTFNALINGFCKKKMIKEARKLF 366
Query: 323 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 382
+ + N MI A+ K G +E L G PN T+ RN
Sbjct: 367 DDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRN 426
Query: 383 GDMKLA 388
+++ A
Sbjct: 427 QNVRAA 432
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 78/181 (43%), Gaps = 3/181 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP--ETSKNHLTYGSLLN 131
L +M G+ VS + + + Q + AA+ ++ E + +TY L+
Sbjct: 397 GFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIG 456
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+CK+ KAE LL +M + + + + +N+LM Y G+ + + +M+
Sbjct: 457 GWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRA 516
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ TYNV ++ + A R++ EM G + + TT+ + +E G E
Sbjct: 517 NVVTYNVLIKGFCKTGKLEDANRLLNEMLEKG-LNPNRTTYDVVRLEMLEKGFIPDIEGH 575
Query: 252 L 252
L
Sbjct: 576 L 576
>gi|302790816|ref|XP_002977175.1| hypothetical protein SELMODRAFT_106630 [Selaginella moellendorffii]
gi|300155151|gb|EFJ21784.1| hypothetical protein SELMODRAFT_106630 [Selaginella moellendorffii]
Length = 806
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 112/251 (44%), Gaps = 14/251 (5%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+ SL+N Y + + +A + + + E + S F +++ YA GHP + I +E
Sbjct: 389 IVQNSLINMYARSGLLAEAREVFDSILENSKTVVS--FTTMIAAYAHNGHPRQALEIFRE 446
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M A + P+ T+ + A A+ D++ + E M G ++D +++L +Y + G
Sbjct: 447 MTARGVAPNEITFATVLAACVAIGDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCG 506
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW-RSLRLAF-PNTANIS 301
A R + ++ +DL A+ +I Q+GN ++ R L+ P+ A +S
Sbjct: 507 DLGFAARVFETMKT----KDLVAWTTIIAANVQSGNNRAALDLYDRMLQSGIHPDIATLS 562
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
L + NL DL EK ++ D N + YAK G LE A L R
Sbjct: 563 TL--LVACANLGDLAMGEKIHRQALRSKLEQDAHFQNALAAMYAKCGSLEKATRLYRRC- 619
Query: 362 RRGADPNAKTW 372
RG+D TW
Sbjct: 620 -RGSD--VATW 627
>gi|255661204|gb|ACU25771.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 426
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 118/280 (42%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S TY +L+ + KE + + A + L+ M++ + + +++L+ L K K +
Sbjct: 6 SPERYTYSTLITHFGKEGLFDDALSWLQXMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 65
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S I PD YN + A +I EMK G V D ++S L ++Y
Sbjct: 66 IFSRLKRSGITPDXVAYNSMINVFGKAKLFKEARSLISEMKTAG-VXPDTVSYSTLLTMY 124
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ E +++ S+R
Sbjct: 125 VENQKFLEALSVFAEMREIKCSLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKIGIEPNV 184
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
ISY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 185 ISYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQE 244
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
G +PNA T+ + + G + A +K +G
Sbjct: 245 MHNXGIEPNAITYSTIISIWGKVGKLDRAAXLFQKLRSSG 284
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 106/221 (47%), Gaps = 20/221 (9%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY +++ Y K L EKA L+++M + +++ ++++++++ K G ++ +
Sbjct: 217 QNVVTYNTMMMIYGKTLEHEKANNLIQEMHNXGIEPNAITYSTIISIWGKVGKLDRAAXL 276
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S + D Y + A ++ A+R++ E+KR + D I
Sbjct: 277 FQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD-----TAXHILA 331
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + +D++ + +I L Y + N+ EV+ R L FP++
Sbjct: 332 GAGRIEEATWVFRQAIDAGEVKDITVFSRMIDLFSKYKKYANVVEVFDKMRGLGY-FPDS 390
Query: 298 ANISYLNMIQVLVN----LKDLPGAEKCFKEWES-GCATYD 333
N+I +++N L + A + + GCA D
Sbjct: 391 ------NVIALVLNAYGKLHEFDKAHXVYMNMQDEGCAFSD 425
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 82/200 (41%), Gaps = 4/200 (2%)
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
++ P+ YTY+ + A ++ M++D RV D +SNL + + + K
Sbjct: 4 ALSPERYTYSTLITHFGKEGLFDDALSWLQXMEQD-RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 307
A L+ D AY +I ++G+ E + ++ A +SY ++
Sbjct: 63 AISIFSRLKRSGITPDXVAYNSMINVFGKAKLFKEARSLISEMKTAGVXPDTVSYSTLLT 122
Query: 308 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
+ V + A F E + D+ N+MI Y + + A++L R+ G +P
Sbjct: 123 MYVENQKFLEALSVFAEMREIKCSLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKIGIEP 182
Query: 368 NAKTWEIFSDYYLRNGDMKL 387
N ++ Y GD +L
Sbjct: 183 NVISYNTLLRVY---GDAEL 199
>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
lyrata]
gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
lyrata]
Length = 1147
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 133/303 (43%), Gaps = 4/303 (1%)
Query: 70 LYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSL 129
L+ A +++ M G+ T S I++ + + ID A + + + ++Y +L
Sbjct: 359 LFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSM--AAPDVVSYNTL 416
Query: 130 LNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
++ Y K +A L + +K N+ S + +N+L+ ++G+ E + +EM + I
Sbjct: 417 MHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLI 476
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
PD TY ++ ++S A + +EM R G + D ++ + G EKA
Sbjct: 477 YPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKG-IKPDGYAYTTRTVGELRLGDSEKAF 535
Query: 250 RALKELENRNAHR-DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQV 308
R +E+ + H DL+ Y I + GNL + R + +++Y +I+
Sbjct: 536 RLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRG 595
Query: 309 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 368
+ A + E S + + V+I +AK GRLE A + ++RG PN
Sbjct: 596 YLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPN 655
Query: 369 AKT 371
T
Sbjct: 656 VMT 658
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 119/267 (44%), Gaps = 6/267 (2%)
Query: 138 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 197
M KA+ + E M + + + FN+++ K G E++ I EMK +I TYN
Sbjct: 254 MMNKAQEVYETMVMHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYN 313
Query: 198 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 257
+ + + + A R +M+R G + +F+ L Y + GLF++A E+ N
Sbjct: 314 ILINGFSKSGKMEEARRFHGDMQRSGFPVTPY-SFNPLIEGYCKQGLFDEAWGVTDEMLN 372
Query: 258 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 317
+ S Y I + G + + + S +A P+ +SY ++ + ++
Sbjct: 373 AGIYPTTSTYNIYIRALCEFGRIDDARELLSS--MAAPDV--VSYNTLMHGYIKMRKFVE 428
Query: 318 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 377
A F + ++G I N +I + G LE A+ LKE + P+ T+
Sbjct: 429 ASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLK 488
Query: 378 YYLRNGDMKLAVDCLEKAIDTG-RGDG 403
+++NG++ +A + ++ + G + DG
Sbjct: 489 GFVKNGNLSMATEIYDEMLRKGIKPDG 515
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/397 (21%), Positives = 154/397 (38%), Gaps = 90/397 (22%)
Query: 79 ENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNH------LTYGSLLNC 132
E M ++G +V + I L ++ + ++ A+ + ET H +T+ ++L+
Sbjct: 228 EKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVY----ETMVMHGIMPTVITFNTMLDS 283
Query: 133 YCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK------------IP-- 178
K E+ + + +MK N+ FS + +N L+ ++K+G E+ P
Sbjct: 284 CFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVT 343
Query: 179 ---------------------AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIE 217
+ EM + I P + TYN+++RAL I A ++
Sbjct: 344 PYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLS 403
Query: 218 EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQT 277
M A D +++ L Y++ F +A +L+ N + + Y LI ++
Sbjct: 404 SM-----AAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCES 458
Query: 278 GNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGA----------------- 318
GNL R+ + +L +P+ I+Y +++ V +L A
Sbjct: 459 GNLEGAQRLKEEMTSQLIYPDV--ITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGY 516
Query: 319 ---------------EKCFKEWESGCA----TYDIRVTNVMIGAYAKEGRLENAEELKER 359
EK F+ E A D+ + NV I K G LE A E + +
Sbjct: 517 AYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRK 576
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 396
R G P+ T+ YL G K+A D ++ +
Sbjct: 577 IFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEML 613
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 152/355 (42%), Gaps = 11/355 (3%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
A L + ME+ G V + + + K + ++ A + F + + S TY SL+
Sbjct: 99 AAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQ 158
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C ++A ALL +M LN+ + + FN L+ + K G +++ M + P
Sbjct: 159 GLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEP 218
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D TYN M + ++ A ++ + M G D ++S L + Y +A ++A++
Sbjct: 219 DVVTYNSLMYGYSMWTEVVEARKLFDVMITKG-CKPDVFSYSILINGYCKAKRIDEAKQL 277
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI-SYLNMIQVLV 310
E+ ++ + + +Y LI Q G L E +++++ N N+ +Y ++
Sbjct: 278 FNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTN-GNLPNLYTYAILLDGFC 336
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
L A + F+ +S ++ + N+++ A K G L++A EL G PN +
Sbjct: 337 KQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQ 396
Query: 371 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKD 425
+ + + G + A++ D G P + +R F Q KD
Sbjct: 397 IYTTIINGLCKEGLLDEALEAFRNMEDDG------CPPDEFSYNVIIRGFLQHKD 445
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 120/303 (39%), Gaps = 3/303 (0%)
Query: 83 KRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTE 140
K G+ T+ ++ + KV A F D+ + TY +++N CK T
Sbjct: 38 KLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETA 97
Query: 141 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 200
A L +KM+E + + +++L+ K + I MKA I P +TY +
Sbjct: 98 LAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLI 157
Query: 201 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 260
+ L + A ++ EM + + TF+ L + + G AE LK +
Sbjct: 158 QGLCNFSRWKEASALLNEMTSL-NIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGV 216
Query: 261 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 320
D+ Y L+ Y + E +++ + SY +I K + A++
Sbjct: 217 EPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQ 276
Query: 321 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 380
F E +T + N +I + GRL A++L + G PN T+ I D +
Sbjct: 277 LFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFC 336
Query: 381 RNG 383
+ G
Sbjct: 337 KQG 339
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 102/259 (39%), Gaps = 36/259 (13%)
Query: 114 VDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGH 173
++L S N T L+NC+C+ + ++L K +L L + + F +L+ K G
Sbjct: 1 MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60
Query: 174 PEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFS 233
+ + +M A PD YTY + L + + + A
Sbjct: 61 FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALA--------------------- 99
Query: 234 NLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 293
AGLF+K E A +L ++ Y LI + ++E I+ ++
Sbjct: 100 --------AGLFKKMEEAGCQL-------NVVTYSTLIHSLCKYRRVNEALDIFSYMKAK 144
Query: 294 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
+ +Y ++IQ L N A E S ++ NV++ + KEG++ A
Sbjct: 145 DISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAA 204
Query: 354 EELKERARRRGADPNAKTW 372
E + + G +P+ T+
Sbjct: 205 EGVLKTMTEMGVEPDVVTY 223
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 65/160 (40%), Gaps = 2/160 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLN 131
A L +NM G + AI LD K + A F + T N + Y L+N
Sbjct: 309 AQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVN 368
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK + A L ++ + L + + +++ K G ++ + M+ P
Sbjct: 369 AMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPP 428
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTT 231
D ++YNV +R D S A +I EM+ G + TT
Sbjct: 429 DEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGTT 468
>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 146/346 (42%), Gaps = 17/346 (4%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELM 138
M +G+ ++ +V ID A F + E N TY ++L K+ +
Sbjct: 389 MASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGMLGKKSL 448
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
+E+ +L MK + + +N+++ + K G + + + +EMK PD T+N
Sbjct: 449 SEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNT 508
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
+ A + A ++ EEM + G + T++ L + G ++ AE + ++ N+
Sbjct: 509 LISAYGRCGSNNDAAKMHEEMIKAG-FSPCINTYNALLNALARRGDWKAAESVILDMRNK 567
Query: 259 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLK--D 314
++Y ++ Y + GN+ + I +S+ FP+ + L VL N K
Sbjct: 568 GFRPSETSYSLMVHSYAKGGNVKGIEMIEKSIYDGDIFPSWMLLRTL----VLANFKCRS 623
Query: 315 LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 374
L G E+ F+ + D+ + N M+ +AK + A E+ G P+ T
Sbjct: 624 LTGMERAFQALQKHGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNS 683
Query: 375 FSDYYLRNGDMKLAVDCLEKAIDTGRGDGGK--WVPSSETIRTFMR 418
D Y R GD A E+ + + GGK V + I+ F R
Sbjct: 684 LMDMYARGGDCWKA----EEVLRMLQTSGGKPDLVSYNTVIKGFCR 725
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/366 (21%), Positives = 159/366 (43%), Gaps = 9/366 (2%)
Query: 75 LKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNC 132
L+L + M RG++ + L + ID A +F L +TY +LL+
Sbjct: 278 LELLDEMRSRGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGTVTYNALLHV 337
Query: 133 YCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPD 192
+ K + +A ++L +M+E N ++ +N ++ Y + G E+ +I M + IMP+
Sbjct: 338 FGKAGIFSEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMASKGIMPN 397
Query: 193 SYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERAL 252
+ TY + A V DI A + ++M G V + T++ + + + L E+ + L
Sbjct: 398 AVTYTTIINAYGRVGDIDKALEMFDQMMELGCV-PNVATYNAVLGMLGKKSLSEEMMKIL 456
Query: 253 KELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNL 312
++ + + ++ + G+ G V +++R ++ ++ +I
Sbjct: 457 GHMKLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRC 516
Query: 313 KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
A K +E + I N ++ A A+ G + AE + R +G P+ ++
Sbjct: 517 GSNNDAAKMHEEMIKAGFSPCINTYNALLNALARRGDWKAAESVILDMRNKGFRPSETSY 576
Query: 373 EIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGF 432
+ Y + G++K ++ +EK+I G PS +RT + + + + G E
Sbjct: 577 SLMVHSYAKGGNVK-GIEMIEKSIYD-----GDIFPSWMLLRTLVLANFKCRSLTGMERA 630
Query: 433 LEILKK 438
+ L+K
Sbjct: 631 FQALQK 636
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 139/337 (41%), Gaps = 23/337 (6%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEM 184
Y ++L+ Y + +A + E+M E L S + +N ++ +Y K G +KI ++ EM
Sbjct: 225 YTTILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVMLDVYGKMGRSWDKILELLDEM 284
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
++ + D +T + + A I A +K +G T++ L ++ +AG+
Sbjct: 285 RSRGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGT-VTYNALLHVFGKAGI 343
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISY 302
F +A L E+E N D Y ++ Y + G E + ++ + PN ++Y
Sbjct: 344 FSEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMASKGIMPNA--VTY 401
Query: 303 LNMIQVLVNLKDLPGAEKCFKE-WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
+I + D+ A + F + E GC ++ N ++G K+ E ++ +
Sbjct: 402 TTIINAYGRVGDIDKALEMFDQMMELGCVP-NVATYNAVLGMLGKKSLSEEMMKILGHMK 460
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
G PN TW + G K + + G + P +T T + +
Sbjct: 461 LNGCSPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCG------FEPDRDTFNTLISAYG 514
Query: 422 Q-EKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAA 457
+ + D A+ E++K F P I TY A
Sbjct: 515 RCGSNNDAAKMHEEMIKAG--------FSPCINTYNA 543
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 79/377 (20%), Positives = 153/377 (40%), Gaps = 51/377 (13%)
Query: 120 SKNHLTYGSLLNCYCKELMT-EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
S + +TY +L+ Y K + +K LL++M+ L F +++++ + G ++
Sbjct: 254 SPSLVTYNVMLDVYGKMGRSWDKILELLDEMRSRGLDFDEFTCSTVLSACGREGLIDEAR 313
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+K+ P + TYN + S A V+ EM+ + D T++ + +
Sbjct: 314 EFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLSEMEEN-NCPPDAVTYNEVVAA 372
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR--LAFPN 296
YV AG E+ + + ++ + Y +I YG+ G++ + ++ + PN
Sbjct: 373 YVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELGCVPN 432
Query: 297 TANISYL-----------NMIQVLVNLKDLPGAE-----------------------KCF 322
A + + M+++L ++K L G + F
Sbjct: 433 VATYNAVLGMLGKKSLSEEMMKILGHMK-LNGCSPNHITWNTMLAMCGKKGMHKYVNQVF 491
Query: 323 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 382
+E ++ D N +I AY + G +A ++ E + G P T+ + R
Sbjct: 492 REMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNALARR 551
Query: 383 GDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH-FEQEKDVDGAEGFLEILKKAVD 441
GD K A E I R G + SET + M H + + +V G +E+++K++
Sbjct: 552 GDWKAA----ESVILDMRNKGFR---PSETSYSLMVHSYAKGGNVKG----IEMIEKSIY 600
Query: 442 DLGVEVFEPLIRTYAAA 458
D + L+RT A
Sbjct: 601 DGDIFPSWMLLRTLVLA 617
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 118/286 (41%), Gaps = 15/286 (5%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY +LLN + + AE+++ M+ S ++ ++ YAK G+ + I I + +
Sbjct: 540 TYNALLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYAKGGNVKGIEMIEKSI 599
Query: 185 KASSIMPDSYTYNVWM--RALAAVN----DISGAERVIEEMKRDGRVAADWTTFSNLASI 238
I P WM R L N ++G ER + +++ G D +++ SI
Sbjct: 600 YDGDIFPS------WMLLRTLVLANFKCRSLTGMERAFQALQKHG-YKPDLVLCNSMLSI 652
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
+ + ++++A L+ + + DL + L+ +Y + G+ + + R L+ +
Sbjct: 653 FAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAEEVLRMLQTSGGKPD 712
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+SY +I+ + + E S I N I YA +G ++
Sbjct: 713 LVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVGPCIFTYNTFISGYAAQGMFTEINDVIS 772
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA--IDTGRGD 402
PN T++I +D Y + A+D + K +D GD
Sbjct: 773 YMIVHNCRPNELTYKIVADGYCKARRYDEAIDFVSKIKDVDDTFGD 818
>gi|357144696|ref|XP_003573383.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like [Brachypodium distachyon]
Length = 606
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 135/316 (42%), Gaps = 13/316 (4%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL----PETSKNHLTYGSLLNCYCKE 136
M K+G TV Q ++ + + AE F + PE S +TY +L +
Sbjct: 167 MNKKGYRPTVISQTALMEAYGRAKQYRKAEAVFHRMQTSGPEPSP--ITYQIILKSLVEG 224
Query: 137 LMTEKAEALLEKMKELNLGF---SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDS 193
++AEA+ E + F F+ ++ +Y K+G + + +M I +
Sbjct: 225 DKYKEAEAIFEDLLSEKRTFFKPDQKMFHMMIYMYKKSGDYAQARKLFAQMSERGIPQST 284
Query: 194 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 253
T+N M ++S + ++M+R G + D ++S L Y +A E+A +
Sbjct: 285 VTFNSLMSFEGDYKEVSS---IYDQMQRAG-LKPDVVSYSLLIKAYGKARREEEASAVFE 340
Query: 254 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLK 313
E+ + +Y L+ + +G + E +++++R SY M+ VN
Sbjct: 341 EMLDAGIRPTRKSYNILLDAFAISGLVEEAQTVFKTMRRHRVEPDLCSYTTMLLAYVNAS 400
Query: 314 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 373
D+ GAEK F+ + ++ V ++ Y+K +E + ER R +G +PN +
Sbjct: 401 DMDGAEKFFRRIKEDGLRPNVVVYGTLMKGYSKLDNVEKVMRVYERMRMQGVEPNQTIFT 460
Query: 374 IFSDYYLRNGDMKLAV 389
D + RN D AV
Sbjct: 461 TIMDVHGRNSDFGNAV 476
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 108/241 (44%), Gaps = 7/241 (2%)
Query: 116 LPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
+P+++ +T+ SL++ E ++ ++ ++M+ L + ++ L+ Y K E
Sbjct: 280 IPQST---VTFNSLMSF---EGDYKEVSSIYDQMQRAGLKPDVVSYSLLIKAYGKARREE 333
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
+ A+ +EM + I P +YN+ + A A + A+ V + M+R RV D +++ +
Sbjct: 334 EASAVFEEMLDAGIRPTRKSYNILLDAFAISGLVEEAQTVFKTMRRH-RVEPDLCSYTTM 392
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
YV A + AE+ + ++ ++ Y L+ Y + N+ +V R++ +R+
Sbjct: 393 LLAYVNASDMDGAEKFFRRIKEDGLRPNVVVYGTLMKGYSKLDNVEKVMRVYERMRMQGV 452
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEE 355
+ ++ V D A F E E+ D + N+++ + A E
Sbjct: 453 EPNQTIFTTIMDVHGRNSDFGNAVIWFNEMETRGYPPDKKAKNILLSLAKTPEEQQEANE 512
Query: 356 L 356
L
Sbjct: 513 L 513
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 135/335 (40%), Gaps = 29/335 (8%)
Query: 156 FSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERV 215
FS M F L+T Y K G + +++ M P + M A AE V
Sbjct: 139 FSEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYRPTVISQTALMEAYGRAKQYRKAEAV 198
Query: 216 IEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL--ENRNAHR-DLSAYQFLIT 272
M+ G + T L S+ VE +++AE ++L E R + D + +I
Sbjct: 199 FHRMQTSGPEPSPITYQIILKSL-VEGDKYKEAEAIFEDLLSEKRTFFKPDQKMFHMMIY 257
Query: 273 LYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES----- 327
+Y ++G+ ++ +++ A +S + Q V L E +KE S
Sbjct: 258 MYKKSGDYAQARKLF----------AQMSERGIPQSTVTFNSLMSFEGDYKEVSSIYDQM 307
Query: 328 --GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 385
D+ +++I AY K R E A + E G P K++ I D + +G +
Sbjct: 308 QRAGLKPDVVSYSLLIKAYGKARREEEASAVFEEMLDAGIRPTRKSYNILLDAFAISGLV 367
Query: 386 KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGV 445
+ A K + R + P + T + + D+DGAE F +K+ V
Sbjct: 368 EEAQTVF-KTMRRHRVE-----PDLCSYTTMLLAYVNASDMDGAEKFFRRIKEDGLRPNV 421
Query: 446 EVFEPLIRTYAAAGRTSPVM--LRRLKMEKVEVSE 478
V+ L++ Y+ VM R++M+ VE ++
Sbjct: 422 VVYGTLMKGYSKLDNVEKVMRVYERMRMQGVEPNQ 456
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 118/265 (44%), Gaps = 1/265 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+ Y SL++ C+ ++A ++M+ + +NSL+ ++ G +++ +
Sbjct: 182 VVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNL 241
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M PD++T+ + + L + A++++E M G+ D T++ L + G
Sbjct: 242 MVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGK-EPDILTYNTLMNGLCLVG 300
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
E A + + L +R ++ +Y LI Y + + E +R++ +R + ++Y
Sbjct: 301 QLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYN 360
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I L + A+K F E ++ + V++ K G LE A +L + ++
Sbjct: 361 TLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKT 420
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLA 388
PN + + I D R G ++ A
Sbjct: 421 EHKPNIEVFSILLDGMCRAGKLEEA 445
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 116/290 (40%), Gaps = 3/290 (1%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK--NHLTYGSLLNCYCKELM 138
M RG + I +D + K + A+ + K + LTY +L+N C
Sbjct: 242 MVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQ 301
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
E A L E + + + + +N L+ Y K ++ + +EM+ + P + TYN
Sbjct: 302 LEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNT 361
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
+ AL + A+++ EM+ G+ +T+ L + G E+A + ++
Sbjct: 362 LIGALCQSGRVRTAQKLFVEMQTCGQFLK-LSTYCVLLDGLCKNGHLEEAIDLFQSIKKT 420
Query: 259 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 318
++ + L+ + G L E ++ + + I+Y +I L N L A
Sbjct: 421 EHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEA 480
Query: 319 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 368
K + E D NV+I KE + A +L E R R P+
Sbjct: 481 VKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPD 530
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 97/226 (42%), Gaps = 12/226 (5%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHL---TYGSLL 130
A +L E M +G+ + + + + + A+ FV++ +T L TY LL
Sbjct: 340 AFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEM-QTCGQFLKLSTYCVLL 398
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
+ CK E+A L + +K+ + F+ L+ + G E+ E+ + +
Sbjct: 399 DGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLE 458
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
PD+ YN+ + L +S A +++ +M+ G D TF+ + ++ +A +
Sbjct: 459 PDTIAYNILINGLCNKGMLSEAVKLLWQMEEKG-CLPDSITFNVIIQNLLKENEIHEAIQ 517
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPN 296
L+E+ NRN D + L+ L+ W + ++ PN
Sbjct: 518 LLEEMRNRNFSPDEAVTSMLLC-------LASFDPQWHAALVSLPN 556
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/395 (20%), Positives = 171/395 (43%), Gaps = 19/395 (4%)
Query: 65 LRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAK-VQGIDAAENYFVDLPETSK-- 121
L D L A ++ E M G+ +V ++L ++K A F + PE
Sbjct: 185 LVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCW 244
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +Y +++ C+ ++A LL M+ + +++++ Y + G +K+ +I
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+ MK + P+SY Y + L + ++ AE EM R G + D ++ L + +
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG-ILPDTVVYTTLIDGFCK 363
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G A + E+ +R+ D+ Y +I+ + Q G++ E +++ + +++
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 423
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
+ +I + A + ++GC+ ++ +I KEG L++A EL
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSP-NVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 420
+ G PN T+ + ++G+++ AV + G + + T T M +
Sbjct: 483 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV------GEFEAAGLNADTVTYTTLMDAY 536
Query: 421 EQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 455
+ ++D A+ EILK+ + + +P I T+
Sbjct: 537 CKSGEMDKAQ---EILKEMLG----KGLQPTIVTF 564
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 129/279 (46%), Gaps = 1/279 (0%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
S N +TY +L++ CKE + A LL +M ++ L + +NS++ K+G+ E+
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
++ E +A+ + D+ TY M A ++ A+ +++EM G + TF+ L +
Sbjct: 512 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG-LQPTIVTFNVLMNG 570
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
+ G+ E E+ L + + + + + L+ Y NL I++ +
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 630
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+Y N+++ +++ A F+E + + + +V+I + K + A E+ +
Sbjct: 631 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 690
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
+ RR G + + ++ FSD + VD +++ I+
Sbjct: 691 QMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 729
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/336 (19%), Positives = 134/336 (39%), Gaps = 11/336 (3%)
Query: 76 KLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVD------LPETSKNHLTYGSL 129
KL E M+++G+ + L+ ++ + AE F + LP+T + Y +L
Sbjct: 302 KLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDT----VVYTTL 357
Query: 130 LNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
++ +CK A +M ++ + + ++++ + + G + + EM +
Sbjct: 358 IDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 417
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
PDS T+ + + A RV M + G + + T++ L + G + A
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG-CSPNVVTYTTLIDGLCKEGDLDSAN 476
Query: 250 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 309
L E+ ++ Y ++ ++GN+ E ++ A N ++Y ++
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
++ A++ KE I NV++ + G LE+ E+L +G PNA
Sbjct: 537 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 596
Query: 370 KTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGK 405
T+ Y ++K A + G G GK
Sbjct: 597 TTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 135/341 (39%), Gaps = 7/341 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N T LLNC+C+ A + L KM +L S + F SL+ + + +
Sbjct: 115 NLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMF 174
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+M P+ YN + L + A ++ M++DG + D T+++L S
Sbjct: 175 DQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDG-IGPDVVTYNSLISGLCS 233
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
+G + A R + + R + D+ + LI + G +SE + + + ++
Sbjct: 234 SGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVT 293
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I L L AE+ F S D+ +++I Y K ++E+ +L
Sbjct: 294 YSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMS 353
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
+RG N T+ I Y R G + +A + + + G P+ T +
Sbjct: 354 QRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVH------PNIITYNVLLHGLC 407
Query: 422 QEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTS 462
++ A L ++K D + + +IR AG +
Sbjct: 408 DNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVA 448
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/178 (19%), Positives = 80/178 (44%), Gaps = 3/178 (1%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELM 138
M +G V +I ++ K + ++ F ++ + +N +TY L+ YC+
Sbjct: 317 MVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGK 376
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
AE + +M + + + +N L+ G EK I+ +M+ + + D TYN+
Sbjct: 377 LNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNI 436
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 256
+R + +++ A + + G + WT + + +Y + GL +A+ ++++
Sbjct: 437 IIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLY-KKGLRREADALFRKMK 493
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 61/152 (40%), Gaps = 2/152 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
+KL M +RG+ + I + + ++ AE F + N +TY LL+
Sbjct: 345 GMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLH 404
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C EKA +L M++ + + +N ++ K G I + +MP
Sbjct: 405 GLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMP 464
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
D +TY M L A+ + +MK DG
Sbjct: 465 DIWTYTTMMLGLYKKGLRREADALFRKMKEDG 496
>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
Length = 641
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 134/316 (42%), Gaps = 12/316 (3%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TYG+++N +CK+ + + LL +M L + +N+++ K GH K I+ M
Sbjct: 257 TYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGM 316
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
PD TYN + +S A++++E+ G + + +++ L Y + G
Sbjct: 317 IECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKF-SYTPLIHAYCKQGG 375
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISY 302
+++A L E+ R DL Y L+ G + I + R FP+ A I
Sbjct: 376 YDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPD-AGIYN 434
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+ M + K LP A+ E D V ++ + + G L+ A +L E
Sbjct: 435 ILMSGLCKKFK-LPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIE 493
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ 422
+G +P + Y + G MK A+ C+ R P T T + + +
Sbjct: 494 KGMNPGIVGYNAMIKGYCKFGMMKDAMACIN------RMKKRHLAPDEFTYSTVIDGYVK 547
Query: 423 EKDVDGAEG-FLEILK 437
+ D+DGA+ F E++K
Sbjct: 548 QHDLDGAQKMFREMVK 563
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 85/203 (41%), Gaps = 1/203 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +Y L++ YCK+ ++A L +M E + + +L+ G + I
Sbjct: 359 NKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIR 418
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
++M + PD+ YN+ M L + A+ ++ EM D V D ++ L ++
Sbjct: 419 EKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEM-LDQSVLPDAFVYATLVDGFIR 477
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G ++A + + + + + Y +I Y + G + + ++ +
Sbjct: 478 NGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFT 537
Query: 302 YLNMIQVLVNLKDLPGAEKCFKE 324
Y +I V DL GA+K F+E
Sbjct: 538 YSTVIDGYVKQHDLDGAQKMFRE 560
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 98/246 (39%), Gaps = 1/246 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +L++ C++ +A+ LLE+ L + + L+ Y K G ++ + E
Sbjct: 326 VTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIE 385
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M PD TY + L ++ A + E+M G V D ++ L S +
Sbjct: 386 MTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERG-VFPDAGIYNILMSGLCKKF 444
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
A+ L E+ +++ D Y L+ + + GNL E +++ N + Y
Sbjct: 445 KLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYN 504
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
MI+ + A C + D + +I Y K+ L+ A+++ +
Sbjct: 505 AMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKM 564
Query: 364 GADPNA 369
PN
Sbjct: 565 KCKPNV 570
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/346 (19%), Positives = 125/346 (36%), Gaps = 19/346 (5%)
Query: 134 CKELMTEKAEALLEKMKELNLGFSSMP----FNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
CKE E+ L+E G +P +N+L+ Y K G E + E+K
Sbjct: 196 CKEGKLEEGRKLIED----RWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGF 251
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
+P TY + D +R++ EM G + + ++ + + G KA
Sbjct: 252 LPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRG-LTVNVQVYNTIIDARYKHGHIVKAV 310
Query: 250 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQ 307
++ + D+ Y LI+ + G +SE ++ + PN SY +I
Sbjct: 311 ETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPN--KFSYTPLIH 368
Query: 308 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
A E D+ ++ G ++ A ++E+ RG P
Sbjct: 369 AYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFP 428
Query: 368 NAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVD 427
+A + I + + A L + +D +P + T + F + ++D
Sbjct: 429 DAGIYNILMSGLCKKFKLPAAKLLLAEMLDQ------SVLPDAFVYATLVDGFIRNGNLD 482
Query: 428 GAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEK 473
A E+ + + G+ + +I+ Y G M +M+K
Sbjct: 483 EARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKK 528
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 88/224 (39%), Gaps = 26/224 (11%)
Query: 232 FSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS---EVYRIWR 288
+S+L + + +F + E L+ + A +I Y +G + E+Y
Sbjct: 97 YSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFVL 156
Query: 289 SLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEG 348
FP+ I+ +++ +LV L + A K T +M+ KEG
Sbjct: 157 KTYTYFPDV--IACNSLLNMLVKLGRIEIARK---------------FTCIMVKGLCKEG 199
Query: 349 RLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVP 408
+LE +L E +G PN + D Y + GDM++A + G ++P
Sbjct: 200 KLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKG------FLP 253
Query: 409 SSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLI 452
+ ET + F ++ D + L + + V+V+ +I
Sbjct: 254 TVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTII 297
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 129/279 (46%), Gaps = 1/279 (0%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
S N +TY +L++ CKE + A LL +M ++ L + +NS++ K+G+ E+
Sbjct: 895 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 954
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
++ E +A+ + D+ TY M A ++ A+ +++EM G + TF+ L +
Sbjct: 955 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG-LQPTIVTFNVLMNG 1013
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
+ G+ E E+ L + + + + + L+ Y NL I++ +
Sbjct: 1014 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 1073
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+Y N+++ +++ A F+E + + + +V+I + K + A E+ +
Sbjct: 1074 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 1133
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
+ RR G + + ++ FSD + VD +++ I+
Sbjct: 1134 QMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 1172
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/400 (20%), Positives = 171/400 (42%), Gaps = 14/400 (3%)
Query: 65 LRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAK-VQGIDAAENYFVDLPETSK-- 121
L D L A ++ E M G+ +V ++L ++K A F + PE
Sbjct: 628 LVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCW 687
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +Y +++ C+ ++A LL M+ + +++++ Y + G +K+ +I
Sbjct: 688 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 747
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+ MK + P+SY Y + L + ++ AE EM R G + D ++ L + +
Sbjct: 748 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG-ILPDTVVYTTLIDGFCK 806
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G A + E+ +R+ D+ Y +I+ + Q G++ E +++ + +++
Sbjct: 807 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 866
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
+ +I + A + ++GC+ ++ +I KEG L++A EL
Sbjct: 867 FTELINGYCKAGHMKDAFRVHNHMIQAGCSP-NVVTYTTLIDGLCKEGDLDSANELLHEM 925
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 420
+ G PN T+ + ++G+++ AV + G + + T T M +
Sbjct: 926 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV------GEFEAAGLNADTVTYTTLMDAY 979
Query: 421 EQEKDVDGAEGFL-EILKKAVDDLGVEVFEPLIRTYAAAG 459
+ ++D A+ L E+L K + V F L+ + G
Sbjct: 980 CKSGEMDKAQEILKEMLGKGLQPTIV-TFNVLMNGFCLHG 1018
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/336 (19%), Positives = 134/336 (39%), Gaps = 11/336 (3%)
Query: 76 KLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVD------LPETSKNHLTYGSL 129
KL E M+++G+ + L+ ++ + AE F + LP+T + Y +L
Sbjct: 745 KLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDT----VVYTTL 800
Query: 130 LNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
++ +CK A +M ++ + + ++++ + + G + + EM +
Sbjct: 801 IDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 860
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
PDS T+ + + A RV M + G + + T++ L + G + A
Sbjct: 861 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG-CSPNVVTYTTLIDGLCKEGDLDSAN 919
Query: 250 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 309
L E+ ++ Y ++ ++GN+ E ++ A N ++Y ++
Sbjct: 920 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 979
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
++ A++ KE I NV++ + G LE+ E+L +G PNA
Sbjct: 980 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 1039
Query: 370 KTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGK 405
T+ Y ++K A + G G GK
Sbjct: 1040 TTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 1075
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 128/302 (42%), Gaps = 38/302 (12%)
Query: 100 VAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFS 157
++ V +D A Y+ ++ E N TYG L++ Y EKAE LL +M L +
Sbjct: 533 LSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPN 592
Query: 158 SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIE 217
+ ++ Y K+ + EK+ + ++ M +MPD+ Y + + L++ + A V+
Sbjct: 593 DFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLS 652
Query: 218 EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQT 277
++++G V D + +L S + +A EKA L E+ + +S Y LI + ++
Sbjct: 653 VIEKNGLV-PDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKS 711
Query: 278 GNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVT 337
++S I+ S + K LP C TY
Sbjct: 712 DDISHARNIFNS--------------------IICKGLP----------PNCVTY----- 736
Query: 338 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
+I Y K G + +A +L G P+A + + + +GD++ A+ E+ I
Sbjct: 737 TTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIA 796
Query: 398 TG 399
G
Sbjct: 797 RG 798
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 121/282 (42%), Gaps = 1/282 (0%)
Query: 113 FVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTG 172
F++ S + TY +L+ YCK E A+ ++E+M+E + + +N+L+ + G
Sbjct: 233 FMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAG 292
Query: 173 HPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTF 232
E+ +EM+ ++PD +TY + L A+ +++EM G + + +
Sbjct: 293 AIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAG-LMPNVVVY 351
Query: 233 SNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL 292
S L ++ G ++A + +KE+ + Y LI + G + RI + +
Sbjct: 352 STLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTK 411
Query: 293 AFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLEN 352
++Y +I+ + + A E G + ++ +++I + G E
Sbjct: 412 IGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESER 471
Query: 353 AEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
A L E+ G PNA + Y R G LA + L+K
Sbjct: 472 ASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKK 513
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 123/315 (39%), Gaps = 36/315 (11%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S N TY ++N C+ +E+A LLE+M L ++ + L++ Y + G
Sbjct: 450 SPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACE 509
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+++M ++ PD Y YN + L+ V + A +EM G D+T + L Y
Sbjct: 510 TLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFT-YGGLIHGY 568
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--------- 290
AG EKAE+ L ++ N + + Y ++ Y ++ NL +V +S+
Sbjct: 569 SMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDN 628
Query: 291 RLAFPNTANIS--------------------------YLNMIQVLVNLKDLPGAEKCFKE 324
RL N+S Y ++I D+ A E
Sbjct: 629 RLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDE 688
Query: 325 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 384
I N +I + K + +A + +G PN T+ D Y + GD
Sbjct: 689 MAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGD 748
Query: 385 MKLAVDCLEKAIDTG 399
++ A+D + + G
Sbjct: 749 IRDAIDLYNEMLTEG 763
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/338 (20%), Positives = 147/338 (43%), Gaps = 6/338 (1%)
Query: 64 KLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--K 121
K+RD + A K+ E M + G + V + + + I+ A Y ++ +
Sbjct: 255 KVRDLE---SAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVP 311
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ TYG+++N CK ++A+ LL++M L + + +++L+ + + G+ ++ I+
Sbjct: 312 DGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIV 371
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+EM A+ + P+ TY+ +R L + + A R++++M + G + AD T++ + ++
Sbjct: 372 KEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYM-ADTMTYNLVIEGHLR 430
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
E+A L E+ ++ Y +I Q G + +
Sbjct: 431 QHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFV 490
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I A + K+ T D+ N +I + G+++ A E +
Sbjct: 491 YAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEML 550
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+G PN T+ Y G+++ A L + +++G
Sbjct: 551 EKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSG 588
>gi|254939549|ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays]
gi|218684531|gb|ACL01094.1| chloroplast pentatricopeptide repeat protein 10 [Zea mays]
gi|223948163|gb|ACN28165.1| unknown [Zea mays]
gi|413943497|gb|AFW76146.1| pentatricopeptide repeat10 [Zea mays]
Length = 786
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 155/361 (42%), Gaps = 12/361 (3%)
Query: 106 IDAAENYFVDLPETSKNH----LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPF 161
+D A +F DL ++ H +TY +LL + K +A +L +M++ ++ +
Sbjct: 261 VDEAVAFFEDL--KARGHAPCVVTYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTY 318
Query: 162 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 221
N L YA+ G E+ + M + ++P+++TYN M A V + A + ++MK+
Sbjct: 319 NELAGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTAYGNVGKVDEALALFDQMKK 378
Query: 222 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 281
G V + T++ + + + F L E+ + + ++ + G+ G
Sbjct: 379 TGFV-PNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMED 437
Query: 282 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 341
V R+ +R + +Y +I A K + E S T I N ++
Sbjct: 438 YVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALL 497
Query: 342 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRG 401
+++G A+ + + R +G PN +++ + Y + G++ + +E + G
Sbjct: 498 NVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVA-GIAAIENEV---YG 553
Query: 402 DGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 461
G + PS +RT + + + +DG E + +K + + +F ++ YA G
Sbjct: 554 SGAVF-PSWVILRTLVIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMY 612
Query: 462 S 462
S
Sbjct: 613 S 613
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/256 (18%), Positives = 109/256 (42%), Gaps = 1/256 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY +L+ Y + A + +M +N+L+ + ++ G +I+ +M
Sbjct: 457 TYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKM 516
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ P+ +Y++ ++ A +++G + E+ G V W L +
Sbjct: 517 RTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLVIANFKCRR 576
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+ E A +E++ R + DL + ++++Y + G S+ ++ S++ + + I+Y +
Sbjct: 577 LDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNS 636
Query: 305 MIQVLVNLKDLPGAEKCFKEWE-SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
++ + + AEK + + S D+ N +I + K+G ++ A+ +
Sbjct: 637 LMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSEMVAD 696
Query: 364 GADPNAKTWEIFSDYY 379
G P A T+ Y
Sbjct: 697 GMAPCAVTYHTLVGGY 712
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 91/214 (42%), Gaps = 7/214 (3%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAK---VQGIDAAENYFVDLPETSKNHLTYGSLL 130
A + M +G ++ L AK V GI A EN + + +L+
Sbjct: 509 AQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLV 568
Query: 131 --NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS 188
N C+ L + E +++K + FNS++++YAK G K + +K S
Sbjct: 569 IANFKCRRL--DGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSG 626
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
+ PD TYN M A ++ AE+++ ++K + D +++ + + + + GL ++A
Sbjct: 627 LSPDLITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEA 686
Query: 249 ERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 282
+R L E+ Y L+ Y SE
Sbjct: 687 QRVLSEMVADGMAPCAVTYHTLVGGYSSLEMFSE 720
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 74/379 (19%), Positives = 138/379 (36%), Gaps = 91/379 (24%)
Query: 43 LNQFLKSKK-RVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVA 101
L FL S++ + + ++ LK L + AL L K G + A L++V
Sbjct: 91 LAAFLASRRDELLRADITSLLKALELSGHWEWALALLRWAGKEG-----AADASALEMVV 145
Query: 102 KVQGIDAAENYFVDL-------PETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNL 154
+ G + + L P + + Y ++L+ + E+A L +++ +
Sbjct: 146 RALGREGQHDAVCALLDETPLPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGV 205
Query: 155 GFSSMPFNSLMTLYAKTGHP-EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAE 213
+ + +N ++ +Y + G +I A++ EM+A+ + PD +T A
Sbjct: 206 APTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDGFT----------------AS 249
Query: 214 RVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITL 273
VI RDG L ++A ++L+ R + Y L+ +
Sbjct: 250 TVIAACCRDG--------------------LVDEAVAFFEDLKARGHAPCVVTYNALLQV 289
Query: 274 YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYD 333
+G+ GN +E R+ + ++GC D
Sbjct: 290 FGKAGNYTEALRVLGEME----------------------------------QNGCQP-D 314
Query: 334 IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
N + G YA+ G E A + +G PNA T+ Y G + A+ +
Sbjct: 315 AVTYNELAGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTAYGNVGKVDEALALFD 374
Query: 394 KAIDTGRGDGGKWVPSSET 412
+ TG +VP+ T
Sbjct: 375 QMKKTG------FVPNVNT 387
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 52/265 (19%), Positives = 95/265 (35%), Gaps = 30/265 (11%)
Query: 208 DISGAERVIEEMKRDGRVAA----------------DWTTFSNLASIYVEAGLFEKAERA 251
D S E V+ + R+G+ A D ++ + AG +E+A
Sbjct: 137 DASALEMVVRALGREGQHDAVCALLDETPLPPGSRLDVRAYTTVLHALSRAGRYERALEL 196
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTG-NLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
EL + L Y ++ +YG+ G + + + +R A + +I
Sbjct: 197 FAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDGFTASTVIAACC 256
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
+ A F++ ++ + N ++ + K G A + + G P+A
Sbjct: 257 RDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAV 316
Query: 371 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 430
T+ + Y R G + A CL+ G +P++ T T M + VD A
Sbjct: 317 TYNELAGTYARAGFFEEAARCLDTMASKG------LLPNAFTYNTVMTAYGNVGKVDEAL 370
Query: 431 GFLEILKKAVDDLGVEVFEPLIRTY 455
+ +KK F P + TY
Sbjct: 371 ALFDQMKKT-------GFVPNVNTY 388
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 54/127 (42%), Gaps = 5/127 (3%)
Query: 333 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 392
D+R ++ A ++ GR E A EL RR+G P T+ + D Y R G + L
Sbjct: 173 DVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVAL 232
Query: 393 EKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLI 452
+D R G + P T T + ++ VD A F E LK V + L+
Sbjct: 233 ---LDEMRAAGVE--PDGFTASTVIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALL 287
Query: 453 RTYAAAG 459
+ + AG
Sbjct: 288 QVFGKAG 294
>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 827
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 114/248 (45%), Gaps = 1/248 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY +L++C + + E+A + E+MK + FN+L+ +Y K+ P++ +++EM
Sbjct: 290 TYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEM 349
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ S P TYN + A A + A + ++M G + D T++ L S + +AG+
Sbjct: 350 EFSGFSPSIVTYNSLISAYARDGLLREAMELKDQMVEKG-IKPDVFTYTTLLSGFEKAGM 408
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
E A R E+ ++ + LI ++G G +E+ +++ + + +++
Sbjct: 409 DEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNT 468
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
++ V FKE + + N +I AY++ G + A + +R G
Sbjct: 469 LLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAG 528
Query: 365 ADPNAKTW 372
P+ ++
Sbjct: 529 VTPDLSSY 536
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 108/303 (35%), Gaps = 46/303 (15%)
Query: 126 YGSLLNCYC---------KELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYA------- 169
+ S+LNC KE A ++L +++ + SL+T YA
Sbjct: 176 FESVLNCSVVAVIITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRD 235
Query: 170 ----------------------------KTGHP-EKIPAIIQEMKASSIMPDSYTYNVWM 200
K G P KI ++ MK+S + PD YTYN +
Sbjct: 236 AVLVFKKMEEEGCKPTLITYNVILNVYGKMGMPWSKISGLVHGMKSSGVAPDDYTYNTLI 295
Query: 201 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 260
+ A +V EEMK G + D TF+ L +Y ++ ++A LKE+E
Sbjct: 296 SCCRRGSLYEEAAQVFEEMKLSG-FSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGF 354
Query: 261 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 320
+ Y LI+ Y + G L E + + +Y ++ A +
Sbjct: 355 SPSIVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMR 414
Query: 321 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 380
F E + +I N +I + GR ++ E P+ TW +
Sbjct: 415 IFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFG 474
Query: 381 RNG 383
+NG
Sbjct: 475 QNG 477
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 120/275 (43%), Gaps = 2/275 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
T+ +L++ Y + ++A A+ ++M E + +N+++ A+ G E+ + EM
Sbjct: 500 TFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEM 559
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
K P+ TY + A A +I + EE+ G L + + L
Sbjct: 560 KDGRCKPNELTYCSLLHAYANSKEIERMHTLAEEI-YSGLTEPVPVLLKTLVLVNSKCDL 618
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+ E A +EL+ + + DLS +I +YG+ +++ I + + + + +Y +
Sbjct: 619 LMETEHAFEELKKKGS-PDLSTLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNS 677
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
++ + ++ +E+ KE + D+ N +I AY + GR+++A + + G
Sbjct: 678 LMYMHSRSENFERSEEVLKEILAKGLKPDLISYNTVIFAYCRNGRMKDASRIFSYMKTYG 737
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
P+ T+ F Y + + A+ + I G
Sbjct: 738 LVPDVITYNTFVASYAADSLFEDAIGVVRYMIKHG 772
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 1/150 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
T +++ Y + M KA +L M E S +NSLM +++++ + E+ +++E+
Sbjct: 639 TLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLMYMHSRSENFERSEEVLKEI 698
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
A + PD +YN + A + A R+ MK G V D T++ + Y L
Sbjct: 699 LAKGLKPDLISYNTVIFAYCRNGRMKDASRIFSYMKTYGLV-PDVITYNTFVASYAADSL 757
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLY 274
FE A ++ + R+ + Y ++ Y
Sbjct: 758 FEDAIGVVRYMIKHGCKRNQNTYNSIVDGY 787
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 95/220 (43%), Gaps = 4/220 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A+ + + M + G+ +S L +A+ + +E F ++ + N LTY SLL+
Sbjct: 517 AMAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLH 576
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
Y E+ L E++ + +L+ + +K + +E+K P
Sbjct: 577 AYANSKEIERMHTLAEEIYSGLTEPVPVLLKTLVLVNSKCDLLMETEHAFEELKKKG-SP 635
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D T N + ++ A ++ M G + T+++L ++ + FE++E
Sbjct: 636 DLSTLNAMIAIYGRRQMVAKANEILNFMNESG-FSPSLATYNSLMYMHSRSENFERSEEV 694
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 291
LKE+ + DL +Y +I Y + G + + RI+ ++
Sbjct: 695 LKEILAKGLKPDLISYNTVIFAYCRNGRMKDASRIFSYMK 734
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 133/324 (41%), Gaps = 9/324 (2%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
+ N TY L+ C E+A ++ M+ +++ +N+L+ + + G +
Sbjct: 148 VAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAE 207
Query: 179 AIIQEMK-ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
++ M+ + P+ T+N + L + GA +V +EM R+G +A D +++ L S
Sbjct: 208 RVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREG-LAPDVVSYNTLLS 266
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
Y + G ++ E+ R D+ + LI + GNL + + +R
Sbjct: 267 GYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRM 326
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
+++ +I L A +E + N +I Y K GR++ A EL
Sbjct: 327 NEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELI 386
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 417
+ P+ T+ Y + G++ A +K + G +P + T + +
Sbjct: 387 REMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG------VLPDAITYSSLI 440
Query: 418 RHFEQEKDV-DGAEGFLEILKKAV 440
R +EK + D E F +L+ V
Sbjct: 441 RGLCEEKRLNDACELFENMLQLGV 464
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 117/254 (46%), Gaps = 5/254 (1%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
++Y +LL+ YCK ++ A+ +M + L + F SL+ K G+ E+ A++ +
Sbjct: 259 VSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQ 318
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ + + T+ + + A +EEM++ G + ++ L + Y + G
Sbjct: 319 MRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCG-IQPSVVCYNALINGYCKLG 377
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANIS 301
+ A ++E+E + D+ Y +I+ Y + GNL +++ + + + P+ I+
Sbjct: 378 RMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDA--IT 435
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y ++I+ L K L A + F+ D +I + KEG +E A L +
Sbjct: 436 YSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMI 495
Query: 362 RRGADPNAKTWEIF 375
R+G P+ T+ +
Sbjct: 496 RKGVLPDVVTYSVL 509
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 120/278 (43%), Gaps = 1/278 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +T+ S++N CK E A + ++M L + +N+L++ Y K G + A+
Sbjct: 222 NLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVF 281
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EM ++PD T+ + A ++ A ++ +M+ G + + TF+ L + +
Sbjct: 282 SEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG-LRMNEVTFTALIDGFCK 340
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G + A A++E+ + Y LI Y + G + + R + ++
Sbjct: 341 KGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVT 400
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I + +L A + ++ D + +I +E RL +A EL E
Sbjct: 401 YSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENML 460
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ G P+ T+ D + + G+++ A+ ++ I G
Sbjct: 461 QLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKG 498
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 115/262 (43%), Gaps = 18/262 (6%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY SL+ C+E A L E M +L + + +L+ + K G+ EK ++ E
Sbjct: 434 ITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDE 493
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA--------------ADW 229
M ++PD TY+V + L+ A R++ ++ + V A++
Sbjct: 494 MIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEF 553
Query: 230 TTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS 289
+ L + GL ++A++ + + +RN D S Y LI + + GN+ + +
Sbjct: 554 KSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQ 613
Query: 290 -LRLAF-PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKE 347
LR F PN+ S +++++ L + A+ ++ + C D + +I KE
Sbjct: 614 MLRSGFSPNST--STISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKE 671
Query: 348 GRLENAEELKERARRRGADPNA 369
G ++ ++ R G P++
Sbjct: 672 GNVDALIDVLCGMARDGLLPSS 693
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/331 (18%), Positives = 142/331 (42%), Gaps = 24/331 (7%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +T+ +L++ +CK+ + A +E+M++ + S + +N+L+ Y K G + +I
Sbjct: 327 NEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELI 386
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+EM+A + PD TY+ + V ++ A ++ ++M + G V D T+S+L E
Sbjct: 387 REMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG-VLPDAITYSSLIRGLCE 445
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTAN 299
A + + D Y LI + + GN+ + + + + P+
Sbjct: 446 EKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVT 505
Query: 300 ISYL--------------NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 345
S L ++ L + +P K + C+ + + ++ +
Sbjct: 506 YSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIK-YDALMLCCSKAEFKSVVALLKGFC 564
Query: 346 KEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGK 405
+G ++ A+++ + R + + I + R G+++ A+ ++ + +G
Sbjct: 565 MKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSG------ 618
Query: 406 WVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 436
+ P+S + + +R +E V A+ ++ L
Sbjct: 619 FSPNSTSTISLVRGLFEEGMVVEADNAIQDL 649
>gi|115461420|ref|NP_001054310.1| Os04g0684500 [Oryza sativa Japonica Group]
gi|113565881|dbj|BAF16224.1| Os04g0684500 [Oryza sativa Japonica Group]
Length = 901
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/405 (19%), Positives = 162/405 (40%), Gaps = 46/405 (11%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL E M+ G+ T+ +I + AK+ +A+N F + +S N + Y ++++
Sbjct: 318 ALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIH 377
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C+ E+AE L+ +M+E + ++S+M Y + K + + +K P
Sbjct: 378 AHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKP 437
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+Y + + ++ A + +EM+ G + + T+S L + ++ F A
Sbjct: 438 SIISYGCLLNLYVKIGKVAKALSISKEMESCG-IKHNNKTYSMLINGFIHLHDFANAFAI 496
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
+E+ D + Y LI + + GN+ I ++ +N ++ +I+
Sbjct: 497 FEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIE---- 552
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
YA G +++A + + RR G P T
Sbjct: 553 -------------------------------GYAVAGDMKSALDTLDLMRRSGCVPTVMT 581
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG 431
+ +R ++ AV L+K G P+ T MR + D+ A
Sbjct: 582 YNALIHGLVRKHKVQRAVSVLDKMSIAG------ITPNEHTYTIIMRGYAASGDIGKAFE 635
Query: 432 FLEILKKAVDDLGVEVFEPLIRTYAAAGR--TSPVMLRRLKMEKV 474
+ +K++ L V ++E L+R +GR ++ + R + +K+
Sbjct: 636 YFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKI 680
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 81/387 (20%), Positives = 159/387 (41%), Gaps = 44/387 (11%)
Query: 108 AAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTL 167
A + F +P+ S+ +G ++ Y K A A E M+ + ++ F SL+
Sbjct: 251 AVVSAFERIPKPSRRE--FGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHA 308
Query: 168 YAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAA 227
YA + ++EMK+ + TY++ + A +ND A+ + +E K +
Sbjct: 309 YAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTK-LSSL 367
Query: 228 DWTTFSNLASIYVEAGLFEKAERALKELEN--------------------RNAHRDLS-- 265
+ +SN+ + ++G E+AE ++E+E +N ++ L
Sbjct: 368 NGIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVF 427
Query: 266 -------------AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNL 312
+Y L+ LY + G +++ I + + N +Y +I ++L
Sbjct: 428 ERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHL 487
Query: 313 KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
D A F+E D + N++I A+ K G ++ A + E+ ++ P+ + +
Sbjct: 488 HDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAF 547
Query: 373 EIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGF 432
+ Y GDMK A+D L+ +G VP+ T + ++ V A
Sbjct: 548 RPIIEGYAVAGDMKSALDTLDLMRRSG------CVPTVMTYNALIHGLVRKHKVQRAVSV 601
Query: 433 LEILKKAVDDLGVEVFEPLIRTYAAAG 459
L+ + A + ++R YAA+G
Sbjct: 602 LDKMSIAGITPNEHTYTIIMRGYAASG 628
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 138/337 (40%), Gaps = 56/337 (16%)
Query: 74 ALKLSENMEKRGM---NKTVS---DQAIHLDLVAKVQGIDAAENYFVDLPETSKNHL--- 124
AL +S+ ME G+ NKT S + IHL A N F E ++ L
Sbjct: 458 ALSISKEMESCGIKHNNKTYSMLINGFIHLHDFA---------NAFAIFEEMLRSGLQPD 508
Query: 125 --TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQ 182
Y L+ +CK ++A +LEKM++ + S+ F ++ YA G + +
Sbjct: 509 RAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLD 568
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
M+ S +P TYN + L + + A V+++M G + + T++ + Y +
Sbjct: 569 LMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAG-ITPNEHTYTIIMRGYAAS 627
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY 302
G KA +++ D+ Y+ L+ ++G + + R +
Sbjct: 628 GDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREM------------ 675
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+ + +P + + N++I +A+ G + AE+L ++ +
Sbjct: 676 --------SFQKIP---------------RNTFIYNILIDGWARRGDVWEAEDLMKQMKE 712
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
G PN T+ + + + GDM+ A +E+ +D G
Sbjct: 713 DGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVG 749
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 88/192 (45%), Gaps = 1/192 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
+ N TY ++ Y KA K+KE L + +L+ K+G + A
Sbjct: 611 TPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALA 670
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+ +EM I +++ YN+ + A D+ AE ++++MK DG V + T+++ +
Sbjct: 671 VTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDG-VPPNIHTYTSYINAC 729
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
+AG ++AE+ ++E+ + ++ Y LI + + + + ++LA
Sbjct: 730 CKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDE 789
Query: 300 ISYLNMIQVLVN 311
SY ++ L++
Sbjct: 790 ASYHCLVTSLLS 801
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 91/201 (45%), Gaps = 3/201 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK--NHLTYGSLLN 131
A+ + + M G+ I + A I A YF + E+ + Y +LL
Sbjct: 598 AVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLR 657
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK + A A+ +M + ++ +N L+ +A+ G + ++++MK + P
Sbjct: 658 ACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPP 717
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ +TY ++ A D+ AE+VIEEM G + + T++ L + L ++A +
Sbjct: 718 NIHTYTSYINACCKAGDMQRAEKVIEEMVDVG-LKPNVKTYTTLIKGWARVSLPDRALKC 776
Query: 252 LKELENRNAHRDLSAYQFLIT 272
+E++ D ++Y L+T
Sbjct: 777 FEEMKLAGLKPDEASYHCLVT 797
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 76/170 (44%), Gaps = 13/170 (7%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL ++ M + + + I +D A+ + AE+ + E N TY S +N
Sbjct: 668 ALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYIN 727
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK ++AE ++E+M ++ L + + +L+ +A+ P++ +EMK + + P
Sbjct: 728 ACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKP 787
Query: 192 DSYTYNVWMRALAAVNDI------SGAERVIEEMKR-----DGRVAADWT 230
D +Y+ + +L + + +G V EM D R A W+
Sbjct: 788 DEASYHCLVTSLLSRATVMEGSTYTGIISVCREMSENDLTVDLRTAVHWS 837
>gi|356574297|ref|XP_003555285.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 794
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 112/249 (44%), Gaps = 1/249 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +LL+ Y K ++A +L++M+ + S + +NSL++ Y + G E + ++
Sbjct: 286 VTYNALLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRK 345
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M I PD YTY + A V EEM++ G + TF+ L +Y + G
Sbjct: 346 MVDKGIKPDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVG-CKPNICTFNALIKMYGDRG 404
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
FE+ + KE++ D+ + L+ ++GQ G SEV ++ ++ + ++
Sbjct: 405 KFEEMVKVFKEIKVCKCSPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFN 464
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I A +K + D+ N ++ A+ G E +E++ +
Sbjct: 465 TLISAYGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDG 524
Query: 364 GADPNAKTW 372
G PN T+
Sbjct: 525 GCKPNEVTY 533
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 116/260 (44%), Gaps = 4/260 (1%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEM 184
Y SL+ Y A + KMKE+ + + +N+++ +Y K G P KI A++Q+M
Sbjct: 182 YTSLITAYANNKKYRDALKVFGKMKEVGCEPTLITYNAILNVYGKMGMPWAKIIALVQDM 241
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
K + PD TYN + A + A + EE+K G D T++ L +Y ++
Sbjct: 242 KCHGLAPDLCTYNTLISCCRAGSLYEEALDLFEEIKVAG-FRPDAVTYNALLDVYGKSRR 300
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
++A LK++E+ + + Y L++ Y + G L + + R + +Y
Sbjct: 301 PKEAMEVLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKMVDKGIKPDVYTYTT 360
Query: 305 MIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
++ VN A + F+E + GC +I N +I Y G+ E ++ + +
Sbjct: 361 LLSGFVNAGKEELAMEVFEEMRKVGCKP-NICTFNALIKMYGDRGKFEEMVKVFKEIKVC 419
Query: 364 GADPNAKTWEIFSDYYLRNG 383
P+ TW + +NG
Sbjct: 420 KCSPDIVTWNTLLAVFGQNG 439
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/401 (20%), Positives = 171/401 (42%), Gaps = 27/401 (6%)
Query: 67 DRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNH--- 123
+ K Y ALK+ M++ G T+ L++ K+ G+ A+ + L + K H
Sbjct: 191 NNKKYRDALKVFGKMKEVGCEPTLITYNAILNVYGKM-GMPWAK--IIALVQDMKCHGLA 247
Query: 124 ---LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
TY +L++C + E+A L E++K ++ +N+L+ +Y K+ P++ +
Sbjct: 248 PDLCTYNTLISCCRAGSLYEEALDLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKEAMEV 307
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
+++M+++S P TYN + A + A V++ D + D T++ L S +V
Sbjct: 308 LKQMESNSFRPSVVTYNSLVSAYVRGGLLEDA-LVLKRKMVDKGIKPDVYTYTTLLSGFV 366
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
AG E A +E+ ++ + LI +YG G E+ ++++ +++ + +
Sbjct: 367 NAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPDIV 426
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
++ ++ V F+E + + N +I AY + G + A +R
Sbjct: 427 TWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAYKRM 486
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 420
G P+ T+ R G + + EK + + G K P+ T + + +
Sbjct: 487 LEAGVSPDLSTYNAVLATLARGGLWEQS----EKVLAEMKDGGCK--PNEVTYSSLLHAY 540
Query: 421 EQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 461
++V+ E E++ I+T+A +T
Sbjct: 541 ANGREVERMNALAE-----------EIYSGTIKTHAVLLKT 570
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 130/318 (40%), Gaps = 8/318 (2%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY +LL+ + E A + E+M+++ + FN+L+ +Y G E++ + +E+
Sbjct: 357 TYTTLLSGFVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKVFKEI 416
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
K PD T+N + S V EEMKR R A + TF+ L S Y G
Sbjct: 417 KVCKCSPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKR-SRFAPERDTFNTLISAYGRCGS 475
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
F++A A K + DLS Y ++ + G + ++ ++ ++Y +
Sbjct: 476 FDQAMAAYKRMLEAGVSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSS 535
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
++ N +++ +E SG + ++ +K L E R+RG
Sbjct: 536 LLHAYANGREVERMNALAEEIYSGTIKTHAVLLKTLVLVNSKVDLLVETERAFLEFRKRG 595
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 424
P+ T Y R + A + L ++G S + + M + + +
Sbjct: 596 ISPDVTTSNAMLSIYGRKKMVPKANEILNFMYESG------LTLSLTSYNSLMYMYSRTE 649
Query: 425 DVDGAEG-FLEILKKAVD 441
+ +E F EIL K ++
Sbjct: 650 NFHKSEQIFREILDKGIE 667
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 118/261 (45%), Gaps = 9/261 (3%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY ++L + + E++E +L +MK+ + + ++SL+ YA E++ A+ +E+
Sbjct: 497 TYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLLHAYANGREVERMNALAEEI 556
Query: 185 KASSIMPDSYTYNVWMRALAAVND----ISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
+ +I T+ V ++ L VN + ER E ++ G ++ D TT + + SIY
Sbjct: 557 YSGTIK----THAVLLKTLVLVNSKVDLLVETERAFLEFRKRG-ISPDVTTSNAMLSIYG 611
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
+ KA L + L++Y L+ +Y +T N + +I+R + I
Sbjct: 612 RKKMVPKANEILNFMYESGLTLSLTSYNSLMYMYSRTENFHKSEQIFREILDKGIEPDVI 671
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
SY +I + A++ +E + D+ N I AYA + A ++
Sbjct: 672 SYNIVIYAYCRNDMMDEAKRIIEEMKVPAPVPDVVTYNTFIAAYAADSMFVEAIDVIRYM 731
Query: 361 RRRGADPNAKTWEIFSDYYLR 381
++G PN T+ D+Y +
Sbjct: 732 IKQGCKPNHNTYNSIVDWYCK 752
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/321 (19%), Positives = 128/321 (39%), Gaps = 36/321 (11%)
Query: 114 VDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGH 173
+ + + S + +T+ +LL + + M + + E+MK FN+L++ Y + G
Sbjct: 416 IKVCKCSPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGS 475
Query: 174 PEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFS 233
++ A + M + + PD TYN + LA +E+V+ EMK DG + T+S
Sbjct: 476 FDQAMAAYKRMLEAGVSPDLSTYNAVLATLARGGLWEQSEKVLAEMK-DGGCKPNEVTYS 534
Query: 234 NLASIYV-----------------------------------EAGLFEKAERALKELENR 258
+L Y + L + ERA E R
Sbjct: 535 SLLHAYANGREVERMNALAEEIYSGTIKTHAVLLKTLVLVNSKVDLLVETERAFLEFRKR 594
Query: 259 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 318
D++ ++++YG+ + + I + + + SY +++ + ++ +
Sbjct: 595 GISPDVTTSNAMLSIYGRKKMVPKANEILNFMYESGLTLSLTSYNSLMYMYSRTENFHKS 654
Query: 319 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 378
E+ F+E D+ N++I AY + ++ A+ + E + P+ T+ F
Sbjct: 655 EQIFREILDKGIEPDVISYNIVIYAYCRNDMMDEAKRIIEEMKVPAPVPDVVTYNTFIAA 714
Query: 379 YLRNGDMKLAVDCLEKAIDTG 399
Y + A+D + I G
Sbjct: 715 YAADSMFVEAIDVIRYMIKQG 735
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 1/155 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + T ++L+ Y ++ M KA +L M E L S +NSLM +Y++T + K
Sbjct: 597 SPDVTTSNAMLSIYGRKKMVPKANEILNFMYESGLTLSLTSYNSLMYMYSRTENFHKSEQ 656
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +E+ I PD +YN+ + A + + A+R+IEEMK V D T++ + Y
Sbjct: 657 IFREILDKGIEPDVISYNIVIYAYCRNDMMDEAKRIIEEMKVPAPV-PDVVTYNTFIAAY 715
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLY 274
+F +A ++ + + + + Y ++ Y
Sbjct: 716 AADSMFVEAIDVIRYMIKQGCKPNHNTYNSIVDWY 750
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/370 (21%), Positives = 154/370 (41%), Gaps = 13/370 (3%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL L ME+R + V + +D + + IDAA + F ++ + +TY SL+
Sbjct: 212 ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 271
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK LL+ M + + + FN L+ ++ K G ++ + +EM I P
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ TYN M N +S A +++ M R+ + + D TF++L Y + +
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNMLDLMVRN-KCSPDIVTFTSLIKGYCMVKRVDDGMKV 390
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVL 309
+ + R + Y L+ + Q+G + +++ + P+ ++Y ++ L
Sbjct: 391 FRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDV--MTYGILLDGL 448
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
+ L A + F++ + I + +I K G++E+A L +G PN
Sbjct: 449 CDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNV 508
Query: 370 KTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 429
T+ + + G + A L K + G P+ T T +R ++ D+ +
Sbjct: 509 MTYTVMISGLCKKGSLSEANILLRKMEEDGNA------PNDCTYNTLIRAHLRDGDLTAS 562
Query: 430 EGFLEILKKA 439
+E +K
Sbjct: 563 AKLIEEMKSC 572
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 137/338 (40%), Gaps = 42/338 (12%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY S++N C+ T A LL KM+E N+ +++++ + G + ++ +E
Sbjct: 194 VTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKE 253
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ I TYN +R L + ++++M + + TF+ L ++V+ G
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR-EIVPNVITFNVLLDVFVKEG 312
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
++A KE+ R ++ Y L+ Y LSE AN
Sbjct: 313 KLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE---------------AN---- 353
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
NM+ ++V K P DI +I Y R+++ ++ +R
Sbjct: 354 NMLDLMVRNKCSP----------------DIVTFTSLIKGYCMVKRVDDGMKVFRNISKR 397
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQE 423
G NA T+ I + ++G +KLA + ++ + G +P T +
Sbjct: 398 GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG------VLPDVMTYGILLDGLCDN 451
Query: 424 KDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 461
++ A E L+K+ DLG+ ++ +I G+
Sbjct: 452 GKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKV 489
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 86/206 (41%), Gaps = 38/206 (18%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
+K+ N+ KRG+ +I + + I AE F ++ + +TYG LL+
Sbjct: 387 GMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLD 446
Query: 132 CYCKELMTEKAEALLEKMKE--LNLG-----------------------FSSMP------ 160
C EKA + E +++ ++LG F S+P
Sbjct: 447 GLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKP 506
Query: 161 ----FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
+ +++ K G + ++++M+ P+ TYN +RA D++ + ++I
Sbjct: 507 NVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLI 566
Query: 217 EEMKRDGRVAADWTTFSNLASIYVEA 242
EEMK G +AD ++ + + + A
Sbjct: 567 EEMKSCG-FSADASSIKMVIDMLLSA 591
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 2/149 (1%)
Query: 59 GDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP- 117
G L L D AL++ E+++K M+ + ++ + K ++ A N F LP
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 501
Query: 118 -ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK 176
N +TY +++ CK+ +A LL KM+E + +N+L+ + + G
Sbjct: 502 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTA 561
Query: 177 IPAIIQEMKASSIMPDSYTYNVWMRALAA 205
+I+EMK+ D+ + + + L +
Sbjct: 562 SAKLIEEMKSCGFSADASSIKMVIDMLLS 590
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 146/327 (44%), Gaps = 6/327 (1%)
Query: 62 LKKLRDRKLYYPALKLSENMEKRGMNKTVSDQ--AIHLDLVAKVQGIDAAENYFVDLPET 119
L++L +R + AL+ E M ++G ++ + +I + + ++ ++ A + F +
Sbjct: 169 LRELGNRGEWERALQGYEWMVQQGHLRSEWSKLASIMISTLGRLGKVEIALDVFNRAQKA 228
Query: 120 S--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTG-HPEK 176
N Y ++++ Y + +A + + MK+ + + +N+++ K G +K
Sbjct: 229 GFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKK 288
Query: 177 IPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLA 236
I +EM+ + PD T+N + + + ++RV EM+R G + D T++ L
Sbjct: 289 ALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRG-IEQDIFTYNTLI 347
Query: 237 SIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPN 296
+ G E A + + +N ++ Y +I YG+ G E ++ ++ +
Sbjct: 348 DAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVR 407
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
+SY +I + L A K+ E D+ N +I AY K+G+ ++A L
Sbjct: 408 PDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGL 467
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNG 383
++ + G PN T+ D Y + G
Sbjct: 468 FDKMKAEGLVPNVLTYSALIDAYSKAG 494
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 142/328 (43%), Gaps = 14/328 (4%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGID--AAENYFVDLPE--TSKNHLTYGSL 129
ALK+ + M+K G + +D K G+D A + F ++ + + +T+ SL
Sbjct: 253 ALKVFQAMKKAGCKPNLITYNTIIDACGK-GGVDLKKALDIFEEMQKEGVEPDRITFNSL 311
Query: 130 LNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
+ + + E ++ + +M+ + +N+L+ K G E +I+ M+ +I
Sbjct: 312 IAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNI 371
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
P+ TY+ + + A + +MK G V D +++ L IY + G F+ A
Sbjct: 372 SPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESG-VRPDRVSYNTLIDIYAKLGRFDDAL 430
Query: 250 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQ 307
A K++E D+ Y LI YG+ G + ++ ++ PN ++Y +I
Sbjct: 431 TACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNV--LTYSALID 488
Query: 308 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
A F E++ D+ + + +I + K G +E+A L + + G P
Sbjct: 489 AYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQP 548
Query: 368 NAKTWEIFSDYYLRNGDMKLAVDCLEKA 395
N T+ D Y RNG VD +E A
Sbjct: 549 NIVTYNSLIDAYGRNGQ----VDNVEAA 572
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 116/265 (43%), Gaps = 18/265 (6%)
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
E A + + ++ G + ++++++ Y ++G + + Q MK + P+ TYN
Sbjct: 215 VEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNT 274
Query: 199 WMRALAAVN-DISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 257
+ A D+ A + EEM+++G V D TF++L ++ L+E ++R E++
Sbjct: 275 IIDACGKGGVDLKKALDIFEEMQKEG-VEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQR 333
Query: 258 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 317
R +D+ Y LI + G + I S+RL + ++Y MI D G
Sbjct: 334 RGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMI-------DGYG 386
Query: 318 AEKCFKEW--------ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
CF+E ESG D N +I YAK GR ++A + R G +
Sbjct: 387 KLGCFEEAIGLYHDMKESGVRP-DRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADV 445
Query: 370 KTWEIFSDYYLRNGDMKLAVDCLEK 394
T+ D Y + G K A +K
Sbjct: 446 VTYNALIDAYGKQGKYKDAAGLFDK 470
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 103/234 (44%), Gaps = 1/234 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
TY +L++ CK E A +++ M+ N+ + + +++++ Y K G E+ + +
Sbjct: 341 FTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHD 400
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
MK S + PD +YN + A + A ++M+R G + AD T++ L Y + G
Sbjct: 401 MKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVG-LKADVVTYNALIDAYGKQG 459
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
++ A +++ ++ Y LI Y + G + I+ + A + Y
Sbjct: 460 KYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYS 519
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
++I + A +E +I N +I AY + G+++N E K
Sbjct: 520 SLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQVDNVEAAK 573
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 3/204 (1%)
Query: 70 LYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYG 127
L+ + ++ M++RG+ + + +D V K ++ A + + L S N +TY
Sbjct: 320 LWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYS 379
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 187
++++ Y K E+A L MKE + + +N+L+ +YAK G + ++M+
Sbjct: 380 TMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERV 439
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
+ D TYN + A A + ++MK +G V + T+S L Y +AG+ +
Sbjct: 440 GLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLV-PNVLTYSALIDAYSKAGMHQD 498
Query: 248 AERALKELENRNAHRDLSAYQFLI 271
A E + D+ Y LI
Sbjct: 499 ATSIFVEFKRAGLKPDVVLYSSLI 522
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Query: 71 YYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGS 128
Y A L + M+ G+ V + +D +K A + FV+ + + Y S
Sbjct: 461 YKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSS 520
Query: 129 LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
L++ CK + E A LL++M + + + + +NSL+ Y + G + + A
Sbjct: 521 LIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQVDNVEA 571
>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
Length = 676
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 136/325 (41%), Gaps = 8/325 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK---NHLTYGSLL 130
A + E M +G+ V +D + K+ + A F+ L ++S N TY ++
Sbjct: 270 AFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMI 329
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
YCKE +AE LL +M E L ++ + +L+ + + G ++ ++ +MK +
Sbjct: 330 GGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFL 389
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
P+ YTYN + I A +V+ G + D T++ L + + + G A
Sbjct: 390 PNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQG-LCPDKVTYTMLITEHCKQGHITYALD 448
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW-RSLRLAFPNTANISYLNMIQVL 309
++ + H D+ Y +I +Y Q + + +++ + L + T +Y +MI
Sbjct: 449 LFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQ-TYTSMIAGY 507
Query: 310 VNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 368
+ A K F+ + GC D +I KE RLE A L E + P
Sbjct: 508 CRVGKSTSALKVFERMVQHGCLP-DPITYGALISGLCKESRLEEARALFETMLDKHMVPC 566
Query: 369 AKTWEIFSDYYLRNGDMKLAVDCLE 393
T + Y R +AV L+
Sbjct: 567 DVTCVTLAYEYCRRDKTTIAVSFLD 591
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 111/265 (41%), Gaps = 7/265 (2%)
Query: 129 LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS 188
+L C C+E E+A+ALL M S ++ + + G +P + M
Sbjct: 188 VLGC-CQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVEMG 246
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
P+ Y W+ L + A V+EEM G + + T ++L + G E+A
Sbjct: 247 NPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKG-LKPNVYTHTSLIDGLCKIGWTERA 305
Query: 249 ERALKELENRNAHR-DLSAYQFLITLYGQTGNLSEV-YRIWRSLRLAF-PNTANISYLNM 305
R +L ++++ ++ Y +I Y + G L+ + R + PNT +Y +
Sbjct: 306 FRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTN--TYTTL 363
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
I A + + + +I N +IG + K+G+++ A ++ A +G
Sbjct: 364 IDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGL 423
Query: 366 DPNAKTWEIFSDYYLRNGDMKLAVD 390
P+ T+ + + + G + A+D
Sbjct: 424 CPDKVTYTMLITEHCKQGHITYALD 448
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 30/62 (48%)
Query: 333 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 392
++ VMIG Y KEG+L AE L R +G PN T+ D + R G A + +
Sbjct: 321 NVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELM 380
Query: 393 EK 394
K
Sbjct: 381 NK 382
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 119/311 (38%), Gaps = 36/311 (11%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY S++ CK +KA +L M + + M +NS++ Y +G P++ +++
Sbjct: 232 VTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKK 291
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M++ + PD TY++ M L A ++ + M + G + + TT+ L Y G
Sbjct: 292 MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRG-LKPEITTYGTLLQGYATKG 350
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF--PNT---- 297
+ L + H D + LI Y + G + + ++ +R PN
Sbjct: 351 ALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYG 410
Query: 298 -----------------------------ANISYLNMIQVLVNLKDLPGAEKCFKEWESG 328
NI Y ++I L AE+ E
Sbjct: 411 AVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR 470
Query: 329 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 388
+ N +I ++ KEGR+ +E+L E R G PN T+ + Y G M A
Sbjct: 471 GICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEA 530
Query: 389 VDCLEKAIDTG 399
+ L + G
Sbjct: 531 MKLLSGMVSVG 541
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 127/286 (44%), Gaps = 6/286 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMP----FNSLMTLYAKTGHPEKI 177
N +Y LL C E +++A LL M + + G S P + +++ + K G +K
Sbjct: 157 NVFSYNILLKGLCDENRSQEALELLHMMAD-DRGGGSPPDVVSYTTVINGFFKEGDSDKA 215
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
+ EM I+PD TYN + AL + A V+ M ++G V D T++++
Sbjct: 216 YSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG-VMPDCMTYNSILH 274
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
Y +G ++A LK++ + D+ Y L+ + G E +I+ S+
Sbjct: 275 GYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKP 334
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
+Y ++Q L D V +++I AYAK+G+++ A +
Sbjct: 335 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVF 394
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDG 403
+ R++G +PNA T+ ++G ++ A+ E+ ID G G
Sbjct: 395 SKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPG 440
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 132/323 (40%), Gaps = 8/323 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL---PETSKNHLTYGSLL 130
A K+ ++M KRG+ ++ L A +G + +DL +H + L+
Sbjct: 320 ARKIFDSMTKRGLKPEITTYGTLLQGYA-TKGALVEMHGLLDLMVRNGIHPDHYVFSILI 378
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
Y K+ ++A + KM++ L +++ + +++ + K+G E ++M +
Sbjct: 379 CAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLS 438
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
P + YN + L N AE +I EM G + + F+++ + + G ++E+
Sbjct: 439 PGNIVYNSLIHGLCTCNKWERAEELILEMLDRG-ICLNTIFFNSIIDSHCKEGRVIESEK 497
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
+ + ++ Y LI Y G + E ++ + ++Y +I
Sbjct: 498 LFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYC 557
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
+ + A FKE ES + DI N+++ + R A+EL R G
Sbjct: 558 KISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELS 617
Query: 371 TWEIFSDYYLRNGDMKLAVDCLE 393
T+ I +N KL D L+
Sbjct: 618 TYNIILHGLCKN---KLTDDALQ 637
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/312 (20%), Positives = 131/312 (41%), Gaps = 3/312 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A+ + M ++G+N + ++ K ++ A YF + + S ++ Y SL++
Sbjct: 390 AMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIH 449
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C E+AE L+ +M + + +++ FNS++ + K G + + + M + P
Sbjct: 450 GLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKP 509
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ TYN + + A +++ M G + + T+S L + Y + E A
Sbjct: 510 NVITYNTLINGYCLAGKMDEAMKLLSGMVSVG-LKPNTVTYSTLINGYCKISRMEDALVL 568
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
KE+E+ D+ Y ++ QT + ++ + + +Y ++ L
Sbjct: 569 FKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCK 628
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
K A + F+ + R N+MI A K GR + A++L G PN T
Sbjct: 629 NKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWT 688
Query: 372 WEIFSDYYLRNG 383
+ + ++ + G
Sbjct: 689 YRLMAENIIGQG 700
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/361 (19%), Positives = 139/361 (38%), Gaps = 48/361 (13%)
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLM-TLYAKTGHPEK 176
E + + TYG L+ C C+ + A L + + ++ F L+ L A +
Sbjct: 82 EVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 141
Query: 177 IPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM--KRDGRVAADWTTFSN 234
+ +++ M +P+ ++YN+ ++ L N A ++ M R G D +++
Sbjct: 142 MDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTT 201
Query: 235 LASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF 294
+ + + + G +KA E+ +R D+ Y +I + + +
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKA----------- 250
Query: 295 PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAE 354
+ ++ +V +P C TY N ++ Y G+ + A
Sbjct: 251 --------MEVLNTMVKNGVMP-----------DCMTY-----NSILHGYCSSGQPKEAI 286
Query: 355 ELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE--KAIDTGRGDGGKWVPSSET 412
++ R G +P+ T+ + DY +NG C+E K D+ G K P T
Sbjct: 287 GFLKKMRSDGVEPDVVTYSLLMDYLCKNG------RCMEARKIFDSMTKRGLK--PEITT 338
Query: 413 IRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKME 472
T ++ + + + G L+++ + VF LI YA G+ ML KM
Sbjct: 339 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMR 398
Query: 473 K 473
+
Sbjct: 399 Q 399
>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
Length = 612
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 110/262 (41%), Gaps = 1/262 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TYG+ + CK + A + E+M E L +++ +L+ + K G + EM
Sbjct: 314 TYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEM 373
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ D YN + V D+ A ++EEM++DG + D T++ L + G
Sbjct: 374 ATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDG-LKPDKVTYTTLIDGCCKEGE 432
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+ A +E+ + D Y LI+ + G + RI + A N +Y
Sbjct: 433 LDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTM 492
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+I D+ K KE ++ I NV++ + G+++NA+ L G
Sbjct: 493 VIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIG 552
Query: 365 ADPNAKTWEIFSDYYLRNGDMK 386
PN T+ I D + ++G ++
Sbjct: 553 VCPNDITYNILLDGHCKHGKVR 574
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 99/244 (40%), Gaps = 3/244 (1%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
FN+LM+ K A+ M + I PD YTY +++ L I A + EEM
Sbjct: 280 FNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMC 339
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
G + + + L + + G E+ R DL AY L+ + + ++
Sbjct: 340 ERG-LNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDM 398
Query: 281 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNV 339
I +R ++Y +I +L A + +E + G A D+ T
Sbjct: 399 KAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYT-A 457
Query: 340 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+I +K GR +AE + G P+ T+ + D + +NGD+K L++ + G
Sbjct: 458 LISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKG 517
Query: 400 RGDG 403
+ G
Sbjct: 518 KNPG 521
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 31/159 (19%), Positives = 73/159 (45%), Gaps = 1/159 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +L++ CKE + A + ++M + + + + +L++ +K G I+ E
Sbjct: 418 VTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCE 477
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + + PD+ TY + + A D+ + ++EM+ G+ T++ + + + G
Sbjct: 478 MMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPG-IVTYNVVMNGFCSLG 536
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 282
+ A+ L + N + Y L+ + + G + +
Sbjct: 537 QMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRD 575
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 111/260 (42%), Gaps = 1/260 (0%)
Query: 116 LPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
L + N TY L++ CKE ++A+ LL M + + + + +N+LM Y G +
Sbjct: 213 LKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQ 272
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
+ M + P+ Y+YN+ + L + A ++ E+ V + T+S+L
Sbjct: 273 NAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVP-NTVTYSSL 331
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
+ + G A LKE+ +R D+ Y L+ + NL + ++ ++
Sbjct: 332 IDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGI 391
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEE 355
+Y +I L A+K F+ ++ NVMI KEG L+ A
Sbjct: 392 QPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALA 451
Query: 356 LKERARRRGADPNAKTWEIF 375
+K + G P+A T+EI
Sbjct: 452 MKSKMEENGCIPDAVTFEII 471
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 117/270 (43%), Gaps = 5/270 (1%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
T N + Y ++++ CK+ + +A L +M + + + +++L+ + G +
Sbjct: 146 TRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAF 205
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
++ EM +I P+ YTY + M AL + A+ ++ M ++G V + +++ L
Sbjct: 206 GLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEG-VKPNVVSYNTLMDG 264
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPN 296
Y G + A++ + + + ++ +Y +I ++ + E + R + + PN
Sbjct: 265 YCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPN 324
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
T ++Y ++I L + A KE D+ ++ A K L+ A L
Sbjct: 325 T--VTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATAL 382
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDMK 386
+ + RG PN T+ D + G K
Sbjct: 383 FMKMKERGIQPNKYTYTALIDGLCKGGRHK 412
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 64/344 (18%), Positives = 130/344 (37%), Gaps = 46/344 (13%)
Query: 159 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 218
M FN ++ K H ++ ++M+ I PD +T N+ + + ++ + V+ +
Sbjct: 11 MEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGK 70
Query: 219 MKRDG-----------------------------RVAA-----DWTTFSNLASIYVEAGL 244
+ + G +V A D +++ L + + G
Sbjct: 71 ILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGE 130
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISY 302
A + L+ +E+R+ ++ Y +I + ++E Y ++ + R FPN I+Y
Sbjct: 131 TRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNV--ITY 188
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+I L A E ++ +++ A KEG+++ A+ L +
Sbjct: 189 STLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTK 248
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ 422
G PN ++ D Y G+++ A + G P+ + + +
Sbjct: 249 EGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVN------PNVYSYNIMIDRLCK 302
Query: 423 EKDVDGAEGFL-EILKKAVDDLGVEVFEPLIRTYAAAGRTSPVM 465
K VD A L E+L K + V + LI + GR + +
Sbjct: 303 SKRVDEAMNLLREVLHKNMVPNTV-TYSSLIDGFCKLGRITSAL 345
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/297 (17%), Positives = 115/297 (38%), Gaps = 7/297 (2%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
T L+NC+C + +L K+ +L +++ N+LM G +K +
Sbjct: 46 FTLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDK 105
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
+ A D +Y + L + + A +++ M D + ++ + +
Sbjct: 106 VVAQGFQMDQVSYATLLNGLCKIGETRSALKLL-RMIEDRSTRPNVVMYNTIIDGLCKDK 164
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
L +A E++ R ++ Y LI + G L E + + + L N +Y
Sbjct: 165 LVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYT 224
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
++ L + A+ ++ N ++ Y G ++NA+++ ++
Sbjct: 225 ILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQK 284
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 420
G +PN ++ I D ++ + A++ L + + VP++ T + + F
Sbjct: 285 GVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHK------NMVPNTVTYSSLIDGF 335
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/279 (18%), Positives = 110/279 (39%), Gaps = 1/279 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +T +L+ C + +K+ +K+ + + +L+ K G ++
Sbjct: 79 NTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLL 138
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+ ++ S P+ YN + L ++ A + EM G + + T+S L +
Sbjct: 139 RMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARG-IFPNVITYSTLIYGFCL 197
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
AG +A L E+ +N + ++ Y L+ + G + E + + +S
Sbjct: 198 AGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVS 257
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y ++ + ++ A++ F ++ N+MI K R++ A L
Sbjct: 258 YNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVL 317
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 400
+ PN T+ D + + G + A+D L++ G+
Sbjct: 318 HKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQ 356
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 7/161 (4%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL L + M RG V LD + K Q +D A F+ + E N TY +L++
Sbjct: 344 ALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALID 403
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK + A+ L + + + +N +++ K G ++ A+ +M+ + +P
Sbjct: 404 GLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIP 463
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTF 232
D+ T+ + +R+L + AE+++ EM +A D F
Sbjct: 464 DAVTFEIIIRSLFEKDQNDKAEKLLHEM-----IAKDLLRF 499
>gi|224073298|ref|XP_002304067.1| predicted protein [Populus trichocarpa]
gi|222841499|gb|EEE79046.1| predicted protein [Populus trichocarpa]
Length = 378
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 117/278 (42%), Gaps = 10/278 (3%)
Query: 146 LEKMKELN---LGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 202
L+ ++ELN L S+ + +L+ + A E+ + +MK P+ Y Y+ + A
Sbjct: 11 LDLVQELNYNGLQMDSVMYGTLLAVCASNNRCEEAQSYFNQMKDEGHSPNIYHYSSLLNA 70
Query: 203 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 262
A+ + AE ++++MK G V + L +YV LFEK+ L EL+ +
Sbjct: 71 YASGGNYKKAEELVQDMKSSGLVPNKVMLTTQL-KVYVRGRLFEKSRDLLVELDTLGFAK 129
Query: 263 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 322
D Y L+ +TG + E ++ ++ SY MI A++
Sbjct: 130 DEMPYCLLMDGLAKTGCIDEARSVFNEMKEKCVKPGGYSYSIMISSFCRGGLFEEAKELA 189
Query: 323 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 382
+E+E+ YD+ ++N ++ AY + G +E+ + P+ T+ I Y+ +
Sbjct: 190 EEFEAKYDKYDVAISNAILCAYCRAGEMESVMRTMRKMDELAISPDYNTFHILIKYFCKE 249
Query: 383 GDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 420
LA +E G P+ E + + H
Sbjct: 250 KLYMLAYQTMEDMHRKGHQ------PAEELCSSLLFHL 281
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 94/243 (38%), Gaps = 42/243 (17%)
Query: 71 YYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGS 128
Y AL L + + G+ L + A + A++YF + + S N Y S
Sbjct: 7 YSKALDLVQELNYNGLQMDSVMYGTLLAVCASNNRCEEAQSYFNQMKDEGHSPNIYHYSS 66
Query: 129 LLNCYCKELMTEKAEALLEKMK--------------------------------ELN-LG 155
LLN Y +KAE L++ MK EL+ LG
Sbjct: 67 LLNAYASGGNYKKAEELVQDMKSSGLVPNKVMLTTQLKVYVRGRLFEKSRDLLVELDTLG 126
Query: 156 FSS--MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAE 213
F+ MP+ LM AKTG ++ ++ EMK + P Y+Y++ + + A+
Sbjct: 127 FAKDEMPYCLLMDGLAKTGCIDEARSVFNEMKEKCVKPGGYSYSIMISSFCRGGLFEEAK 186
Query: 214 RVIEEM--KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 271
+ EE K D D + + Y AG E R +++++ D + + LI
Sbjct: 187 ELAEEFEAKYD---KYDVAISNAILCAYCRAGEMESVMRTMRKMDELAISPDYNTFHILI 243
Query: 272 TLY 274
+
Sbjct: 244 KYF 246
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 64/134 (47%), Gaps = 2/134 (1%)
Query: 97 LDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNL 154
+D +AK ID A + F ++ E +Y +++ +C+ + E+A+ L E+ +
Sbjct: 138 MDGLAKTGCIDEARSVFNEMKEKCVKPGGYSYSIMISSFCRGGLFEEAKELAEEFEAKYD 197
Query: 155 GFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAER 214
+ N+++ Y + G E + +++M +I PD T+++ ++ A +
Sbjct: 198 KYDVAISNAILCAYCRAGEMESVMRTMRKMDELAISPDYNTFHILIKYFCKEKLYMLAYQ 257
Query: 215 VIEEMKRDGRVAAD 228
+E+M R G A+
Sbjct: 258 TMEDMHRKGHQPAE 271
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 117/243 (48%), Gaps = 1/243 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+++TY ++L+ CK+ +A LL MK L + FN L+ + G ++ +I
Sbjct: 231 DNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVI 290
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+ M +S++PD++TYNV + I+ A R+ EEM+ + +++ D T++ L + E
Sbjct: 291 ELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEME-NLKLSPDVVTYNTLINGCFE 349
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G E+ + ++E+E R + Y ++ + + G + EV + R + + ++
Sbjct: 350 HGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVT 409
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I + + A + E D N M+ A +E +L+ A +L AR
Sbjct: 410 YNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSAR 469
Query: 362 RRG 364
RRG
Sbjct: 470 RRG 472
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 128/282 (45%), Gaps = 3/282 (1%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + +TY +L+N + +E+ L+E+M+ + +S+ +N ++ + K G +++
Sbjct: 334 SPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDK 393
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+++M+ S +PD TYN + V + A R+++EM R G D T + L ++
Sbjct: 394 TVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALC 453
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
E L ++A L R D +Y LI Y + S+ R+W ++ +
Sbjct: 454 RERKL-DEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSI 512
Query: 300 ISYLNMIQVLVNL-KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
I+Y +MI L + K +K + ESG +I N +I Y +EG++E A +
Sbjct: 513 ITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEI-TYNTIIHGYCQEGQVEKAFQFHN 571
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 400
+ + P+ T + G ++ A+ I G+
Sbjct: 572 KMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGK 613
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 137/301 (45%), Gaps = 12/301 (3%)
Query: 72 YPALKLSENMEKRGMNKTVSDQAIHLDLVAKV---QGIDAAENYFVDLPETSK--NHLTY 126
+ A ++ M++ GM T+ L+ + + I ++ F D + N ++
Sbjct: 141 HQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINTNSF 200
Query: 127 GSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKA 186
L++ C E +A +L KM++ ++ +N+++ K G + ++ +MK
Sbjct: 201 NILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKN 260
Query: 187 SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE 246
+ P+ T+N+ + + + A VIE M ++ V W T++ + S + + G
Sbjct: 261 KGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAW-TYNVMISGFCKQGRIA 319
Query: 247 KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLN 304
+A R +E+EN D+ Y LI + G+ E +++ + R PN+ ++Y
Sbjct: 320 EAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNS--VTYNV 377
Query: 305 MIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
M++ V + +K ++ ESGC DI N +I + K G+++ A L + R+
Sbjct: 378 MVKWFVKKGKMDEVDKTVRKMEESGCLP-DIVTYNTLISWHCKVGKMDEAFRLMDEMGRK 436
Query: 364 G 364
G
Sbjct: 437 G 437
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 100/245 (40%), Gaps = 1/245 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+T ++L C+E ++A LL + + + +L+ Y K + + E
Sbjct: 443 VTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDE 502
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
MK I+P TYN + L + + A ++E+ G V D T++ + Y + G
Sbjct: 503 MKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVP-DEITYNTIIHGYCQEG 561
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
EKA + ++ +N D+ L+ + G L + +++ + + +SY
Sbjct: 562 QVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYN 621
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I L K A +E E D N ++G GR+++AEE + +
Sbjct: 622 TIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEK 681
Query: 364 GADPN 368
G N
Sbjct: 682 GKSEN 686
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 70/335 (20%), Positives = 128/335 (38%), Gaps = 25/335 (7%)
Query: 168 YAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA---AVNDISGAERVIEEMKRDGR 224
Y G P + I MK + P T N + AL + + I ++ V + + G
Sbjct: 134 YVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIG- 192
Query: 225 VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVY 284
V + +F+ L F +A R L ++ + D Y ++ + G L+E
Sbjct: 193 VKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEAR 252
Query: 285 RIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 342
+ ++ FPN + L + L L A + D NVMI
Sbjct: 253 DLLLDMKNKGLFPNRTTFNIL--VVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMIS 310
Query: 343 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGD 402
+ K+GR+ A L+E P+ T+ + +G + K I+ G
Sbjct: 311 GFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGF----KLIEEMEGR 366
Query: 403 GGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTS 462
G K P+S T ++ F ++ +D + + ++++ + + LI + G+
Sbjct: 367 GMK--PNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMD 424
Query: 463 PV------MLRR-LKMEKVEVSEASKKLLEAICVE 490
M R+ LKM+ V ++ +L A+C E
Sbjct: 425 EAFRLMDEMGRKGLKMDDVTLN----TMLRALCRE 455
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 5/178 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ +TY ++++ YC+E EKA KM E N + N+L+ K G EK +
Sbjct: 546 DEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLF 605
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+ D+ +YN + +L A ++EEM+ + ++ D T++ + +
Sbjct: 606 NTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEME-EKKLGPDCYTYNAILGGLTD 664
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
AG + AE + ++ A + S QFL Q SE+ + +A+ N N
Sbjct: 665 AGRMKDAEEFISKI----AEKGKSENQFLELGKRQDARTSEIPQEPHPNAIAYSNKIN 718
>gi|410110127|gb|AFV61143.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
origanoides]
Length = 408
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 120/280 (42%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 12 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 71
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S PD YN + A +I EMK G V + T++S L +Y
Sbjct: 72 IFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAG-VMPNTTSYSTLLXMY 130
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL +I +YGQ G E +++ +R
Sbjct: 131 VENKKFLEALSVFSEMREIKCLLDLXTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 190
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 191 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 250
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 251 MQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 290
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 90/211 (42%), Gaps = 8/211 (3%)
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+ EM+ ++ PD YTY+ + A +++M++D RV D +SNL +
Sbjct: 1 GLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIEL 59
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPN 296
+ + KA L+ DL AY +I ++G+ E + ++ A PN
Sbjct: 60 SRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPN 119
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
T SY ++ + V K A F E D+ N+MI Y + G + A++L
Sbjct: 120 TT--SYSTLLXMYVENKKFLEALSVFSEMREIKCLLDLXTCNIMIDVYGQLGMAKEADKL 177
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDMKL 387
R+ G +PN ++ Y GD +L
Sbjct: 178 FWGMRKMGIEPNVVSYNTLLRVY---GDAEL 205
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 101/194 (52%), Gaps = 15/194 (7%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 223 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAML 282
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S + D + + A ++ A+R++ E+KR + D T LA
Sbjct: 283 FQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD-TAIHILAG--- 338
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + +D++ ++ +I L Y + N+ EV+ R L FP++
Sbjct: 339 -AGRIEEATYVFRQAVDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGY-FPDS 396
Query: 298 ANISYLNMIQVLVN 311
N+I V++N
Sbjct: 397 ------NVIAVVLN 404
>gi|414864940|tpg|DAA43497.1| TPA: hypothetical protein ZEAMMB73_100357 [Zea mays]
Length = 816
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 125/266 (46%), Gaps = 4/266 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+++TY SL+ + +KA LEKMK + L +P++ +++ +AK G +
Sbjct: 488 DYVTYTSLIQLLSTAKLPKKAIYYLEKMKVVKLLSDCIPYSVVISSFAKNGDLRMSEYLF 547
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+EM S + PD + Y++ + A A V ++ A MK+DG + + T +++L +Y +
Sbjct: 548 REMIMSGVRPDIFVYSILIDAYAEVGNVQQASAYFGLMKKDG-LYENVTIYNSLIKLYTK 606
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN-I 300
G +A A K L++ + + L A +I LY + E ++ SL++ AN
Sbjct: 607 VGYVPEARGAYKLLKSLDTNAILYASNCMIDLYSDHCMVKEACEVFDSLKVR--GIANEF 664
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
S+ M+ + + A + KE ++ + N +I Y GR E A ++ ++
Sbjct: 665 SHAMMVCMYKKVGRYDVAHRVCKEMQALGLLTQLLSYNSVIQMYVSGGRTEEALKIFKKM 724
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMK 386
PN T++ +R+G K
Sbjct: 725 LASNTPPNDATFQALKVILVRSGVTK 750
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 99/439 (22%), Positives = 162/439 (36%), Gaps = 69/439 (15%)
Query: 72 YPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS---------KN 122
+ AL +M KRG+ +I + K + AE +F S N
Sbjct: 188 WTALLWLGDMCKRGLMPDEVTMSIVMQAHKKAGEYETAEIFFERWSSDSIRRMEGRSHYN 247
Query: 123 HLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQ 182
TY +L++ Y K EK +M + S + FNS++ + K EK+ ++++
Sbjct: 248 LYTYNTLIDTYGKAGHLEKVSDTFNQMLSEGVAPSVVTFNSMIHAWGKHHRMEKVASLVR 307
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
M+ PD+ TYN+ + +DI AE +MK + V D + L Y
Sbjct: 308 MMEEFQCFPDTRTYNILIALYRESDDIDIAEYYYWKMKTENLVP-DVVSCRTLLYGYSIR 366
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPN---TAN 299
G+ KAE LKE++ R D L +Y G L + +R + + +AN
Sbjct: 367 GMVTKAEALLKEMDERGFMVDEYTQSALTRMYVNVGMLEQAWRWFDRFHHHMNSECFSAN 426
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCA----TYDIRVTNVMIGAYAKEGRLENAEE 355
I +V AEK F C + NVMI AY G L+ A E
Sbjct: 427 IDAFGEKGYIVL------AEKAFV-----CCLKKKMISVSACNVMIKAYGLVGMLDEACE 475
Query: 356 LKERARRRGADPNAKTW----EIFSD--------YYL----------------------- 380
+ R P+ T+ ++ S YYL
Sbjct: 476 IANGMERYDILPDYVTYTSLIQLLSTAKLPKKAIYYLEKMKVVKLLSDCIPYSVVISSFA 535
Query: 381 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 440
+NGD++++ + I +G P + + + +V A + ++KK
Sbjct: 536 KNGDLRMSEYLFREMIMSGVR------PDIFVYSILIDAYAEVGNVQQASAYFGLMKKDG 589
Query: 441 DDLGVEVFEPLIRTYAAAG 459
V ++ LI+ Y G
Sbjct: 590 LYENVTIYNSLIKLYTKVG 608
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 113/271 (41%), Gaps = 26/271 (9%)
Query: 138 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 197
M ++A + M+ ++ + + SL+ L + P+K +++MK ++ D Y+
Sbjct: 469 MLDEACEIANGMERYDILPDYVTYTSLIQLLSTAKLPKKAIYYLEKMKVVKLLSDCIPYS 528
Query: 198 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 257
V + + A D+ +E + EM G V D +S L Y E G ++A ++
Sbjct: 529 VVISSFAKNGDLRMSEYLFREMIMSG-VRPDIFVYSILIDAYAEVGNVQQASAYFGLMKK 587
Query: 258 RNAHRDLSAYQFLITLYGQTGNLSE---VYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 314
+ +++ Y LI LY + G + E Y++ +SL +T I Y + + D
Sbjct: 588 DGLYENVTIYNSLIKLYTKVGYVPEARGAYKLLKSL-----DTNAILYASNCMI-----D 637
Query: 315 LPGAEKCFKEWESGCATYD-IRVTNV--------MIGAYAKEGRLENAEELKERARRRGA 365
L KE C +D ++V + M+ Y K GR + A + + + G
Sbjct: 638 LYSDHCMVKE---ACEVFDSLKVRGIANEFSHAMMVCMYKKVGRYDVAHRVCKEMQALGL 694
Query: 366 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 396
++ Y+ G + A+ +K +
Sbjct: 695 LTQLLSYNSVIQMYVSGGRTEEALKIFKKML 725
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 97/231 (41%), Gaps = 11/231 (4%)
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 196
++ EKA K K +++ N ++ Y G ++ I M+ I+PD TY
Sbjct: 437 VLAEKAFVCCLKKKMISVS----ACNVMIKAYGLVGMLDEACEIANGMERYDILPDYVTY 492
Query: 197 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 256
++ L+ A +E+MK ++ +D +S + S + + G +E +E+
Sbjct: 493 TSLIQLLSTAKLPKKAIYYLEKMKV-VKLLSDCIPYSVVISSFAKNGDLRMSEYLFREMI 551
Query: 257 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 316
D+ Y LI Y + GN+ + + ++ Y ++I++ + +P
Sbjct: 552 MSGVRPDIFVYSILIDAYAEVGNVQQASAYFGLMKKDGLYENVTIYNSLIKLYTKVGYVP 611
Query: 317 ---GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
GA K K ++ Y +N MI Y+ ++ A E+ + + RG
Sbjct: 612 EARGAYKLLKSLDTNAILY---ASNCMIDLYSDHCMVKEACEVFDSLKVRG 659
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 53/275 (19%), Positives = 107/275 (38%), Gaps = 10/275 (3%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N + Y +LN K + L +M + + + +L+ + + G +
Sbjct: 135 NVIHYNVVLNTVGKARRWDLVLRLWYEMHSFGVAPDNSTYGTLINVCCQGGREWTALLWL 194
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRD------GRVAADWTTFSNL 235
+M +MPD T ++ M+A + AE E D GR + T++ L
Sbjct: 195 GDMCKRGLMPDEVTMSIVMQAHKKAGEYETAEIFFERWSSDSIRRMEGRSHYNLYTYNTL 254
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR--LA 293
Y +AG EK ++ + + + +I +G+ + +V + R +
Sbjct: 255 IDTYGKAGHLEKVSDTFNQMLSEGVAPSVVTFNSMIHAWGKHHRMEKVASLVRMMEEFQC 314
Query: 294 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
FP+T +Y +I + D+ AE + + ++ D+ ++ Y+ G + A
Sbjct: 315 FPDTR--TYNILIALYRESDDIDIAEYYYWKMKTENLVPDVVSCRTLLYGYSIRGMVTKA 372
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 388
E L + RG + T + Y+ G ++ A
Sbjct: 373 EALLKEMDERGFMVDEYTQSALTRMYVNVGMLEQA 407
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/189 (20%), Positives = 80/189 (42%), Gaps = 4/189 (2%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGS--LLNCYCKELM 138
M+K G+ + V+ + L KV + A + L N + Y S +++ Y M
Sbjct: 585 MKKDGLYENVTIYNSLIKLYTKVGYVPEARGAYKLLKSLDTNAILYASNCMIDLYSDHCM 644
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
++A + + +K + + ++ +Y K G + + +EM+A ++ +YN
Sbjct: 645 VKEACEVFDSLKVRGIA-NEFSHAMMVCMYKKVGRYDVAHRVCKEMQALGLLTQLLSYNS 703
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
++ + A ++ ++M D TF L I V +G+ + R L+ L
Sbjct: 704 VIQMYVSGGRTEEALKIFKKMLASNTPPND-ATFQALKVILVRSGVTKNETRKLELLRRN 762
Query: 259 NAHRDLSAY 267
N+H L +
Sbjct: 763 NSHDCLHQW 771
>gi|356562783|ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 859
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 151/379 (39%), Gaps = 30/379 (7%)
Query: 94 AIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKE 151
I + L+ + +D F ++P ++ Y +++N Y + + LL MK+
Sbjct: 140 TIMITLLGREGLLDKCREVFDEMPSNGVARTVYVYTAVINAYGRNGQFHASLELLNGMKQ 199
Query: 152 LNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDIS 210
+ S + +N+++ A+ G E + + EM+ I PD TYN + A A
Sbjct: 200 ERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGD 259
Query: 211 GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 270
AE V M G + D T+S L + + EK L+E+E+ D+++Y L
Sbjct: 260 EAEMVFRTMNESG-IVPDINTYSYLVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVL 318
Query: 271 ITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPG----AEKCFKE 324
+ Y + G++ E ++R ++ A N A S VL+NL G F E
Sbjct: 319 LEAYAELGSIKEAMDVFRQMQAAGCVANAATYS------VLLNLYGKHGRYDDVRDIFLE 372
Query: 325 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE--IFS--DYYL 380
+ D N++I + + G + L +PN +T+E IF+ L
Sbjct: 373 MKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGL 432
Query: 381 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 440
K+ + EK I VPSS+ + F Q + A + +
Sbjct: 433 YEDAKKILLHMNEKGI----------VPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVG 482
Query: 441 DDLGVEVFEPLIRTYAAAG 459
+ VE + I +A G
Sbjct: 483 SNPTVETYNSFIHAFARGG 501
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/379 (21%), Positives = 162/379 (42%), Gaps = 27/379 (7%)
Query: 119 TSKNHLTYGSLLN-CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
S + LTY +++N C L E L +M+ + + +N+L+ A G ++
Sbjct: 202 VSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEA 261
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
+ + M S I+PD TY+ ++ +N + ++ EM+ G + D T+++ L
Sbjct: 262 EMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMESGGNL-PDITSYNVLLE 320
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
Y E G ++A ++++ + + Y L+ LYG+ G +V I+ ++++ +
Sbjct: 321 AYAELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDP 380
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV---------MIGAYAKEG 348
+Y +IQV G FKE + +D+ NV +I A K G
Sbjct: 381 DAGTYNILIQVF-------GEGGYFKEVVT--LFHDMVEENVEPNMETYEGLIFACGKGG 431
Query: 349 RLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVP 408
E+A+++ +G P++K + + + + + A+ + G P
Sbjct: 432 LYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVGSN------P 485
Query: 409 SSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRR 468
+ ET +F+ F + AE L + ++ V F +I+ + G+ +
Sbjct: 486 TVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIKAFRQGGQYEEAVKSY 545
Query: 469 LKMEKVEVSEASKKLLEAI 487
++MEK E ++ LE +
Sbjct: 546 VEMEKANC-EPNELTLEVV 563
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 106/269 (39%), Gaps = 5/269 (1%)
Query: 115 DLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP 174
+LP+ + +Y LL Y + ++A + +M+ ++ ++ L+ LY K G
Sbjct: 308 NLPDIT----SYNVLLEAYAELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRY 363
Query: 175 EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSN 234
+ + I EMK S+ PD+ TYN+ ++ + +M + V + T+
Sbjct: 364 DDVRDIFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEE-NVEPNMETYEG 422
Query: 235 LASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF 294
L + GL+E A++ L + + AY +I +GQ E ++ ++
Sbjct: 423 LIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVG 482
Query: 295 PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAE 354
N +Y + I AE D+ N +I A+ + G+ E A
Sbjct: 483 SNPTVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIKAFRQGGQYEEAV 542
Query: 355 ELKERARRRGADPNAKTWEIFSDYYLRNG 383
+ + +PN T E+ Y G
Sbjct: 543 KSYVEMEKANCEPNELTLEVVLSVYCSAG 571
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 122/299 (40%), Gaps = 21/299 (7%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
+ ++TL + G +K + EM ++ + Y Y + A + ++ MK
Sbjct: 139 YTIMITLLGREGLLDKCREVFDEMPSNGVARTVYVYTAVINAYGRNGQFHASLELLNGMK 198
Query: 221 RDGRVAADWTTFSNLASIYVEAGL-FEKAERALKELENRNAHRDLSAYQFLITLYGQTGN 279
++ RV+ T++ + + GL +E E+ + D+ Y L+ G
Sbjct: 199 QE-RVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGL 257
Query: 280 LSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVT 337
E ++R++ + P+ SYL +Q L L + +E ESG DI
Sbjct: 258 GDEAEMVFRTMNESGIVPDINTYSYL--VQTFGKLNRLEKVSELLREMESGGNLPDITSY 315
Query: 338 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDC-LEKAI 396
NV++ AYA+ G ++ A ++ + + G NA T+ + + Y ++G D LE +
Sbjct: 316 NVLLEAYAELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKV 375
Query: 397 DTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 455
D G + + I+ F G G+ + + D+ E EP + TY
Sbjct: 376 SNTDPDAGTY---NILIQVF-----------GEGGYFKEVVTLFHDMVEENVEPNMETY 420
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/323 (17%), Positives = 127/323 (39%), Gaps = 3/323 (0%)
Query: 76 KLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCY 133
+L ME G ++ + L+ A++ I A + F + N TY LLN Y
Sbjct: 298 ELLREMESGGNLPDITSYNVLLEAYAELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLY 357
Query: 134 CKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDS 193
K + + +MK N + +N L+ ++ + G+ +++ + +M ++ P+
Sbjct: 358 GKHGRYDDVRDIFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNM 417
Query: 194 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 253
TY + A A++++ M G V + ++ + + +A L+E+A
Sbjct: 418 ETYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSS-KAYTGVIEAFGQAALYEEALVVFN 476
Query: 254 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLK 313
+ ++ + Y I + + G E I + + S+ +I+
Sbjct: 477 TMNEVGSNPTVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIKAFRQGG 536
Query: 314 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 373
A K + E E + V++ Y G ++ +EE + + G P+ +
Sbjct: 537 QYEEAVKSYVEMEKANCEPNELTLEVVLSVYCSAGLVDESEEQFQEIKASGILPSVMCYC 596
Query: 374 IFSDYYLRNGDMKLAVDCLEKAI 396
+ Y +N + A + +++ I
Sbjct: 597 LMLALYAKNDRLNDAYNLIDEMI 619
>gi|388499386|gb|AFK37759.1| unknown [Lotus japonicus]
Length = 500
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 138/353 (39%), Gaps = 44/353 (12%)
Query: 109 AENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMT 166
AE+ ++ L E N TY L+ YC + EKAEA+ +MK L S++ +NS +
Sbjct: 181 AESTYLQLLEARCIPNEDTYALLIKAYCLSGLLEKAEAVFVEMKNYGLPSSAVVYNSYIN 240
Query: 167 LYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA 226
K G+P K I MK P + TY + + A +V EM +
Sbjct: 241 GLMKGGNPNKAEEIFLRMKRDGCKPSTETYTMLINLYGKDGKSFMALKVFNEMLSH-KCK 299
Query: 227 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
+ T++ L + + GL EKAE ++++ D+ +Y L+ Y + G
Sbjct: 300 PNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYSYNALMEAYSRAG-------- 351
Query: 287 WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAK 346
FP GA + F + D N+++ AY +
Sbjct: 352 -------FPY--------------------GAAEIFSLMQHMGCEPDRASYNILVDAYGR 384
Query: 347 EGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKW 406
G L +AE + E +R G P K+ + + + G++ D L + +G
Sbjct: 385 AGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFV 444
Query: 407 VPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
+ S + + F + ++V L +++ + + + LI Y AG
Sbjct: 445 LNSMLNLYGRLGQFGKMEEV------LTVMENGSCEADISTYNILINRYGQAG 491
>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 418
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 123/275 (44%), Gaps = 1/275 (0%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
+ L++ +CKE A+++ + + + L S + FN+LM Y K G ++ + M+
Sbjct: 139 FNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMR 198
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
AS + PD YTY+V + L + + A + EM +G V + TF+ L + + G
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLV-PNGVTFTTLIDGHCKNGRL 257
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
+ A +++ N+ D+ Y LI + G+L + + + I+Y +
Sbjct: 258 DLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTTL 317
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
I DL A + + D V +I +EGR +AE++ R G
Sbjct: 318 IDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLREMLRVGL 377
Query: 366 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 400
P+ +T+ + + + + GD+K A + L + GR
Sbjct: 378 KPDDETYTMIMNEFCKKGDVKKASELLREMQRNGR 412
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 5/134 (3%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY L+N CKE ++A L +M + L + + F +L+ + K G + I ++M
Sbjct: 208 TYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQM 267
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG- 243
PD TYN + L D+ A +++EM R G + D T++ L + G
Sbjct: 268 LNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKG-LKPDKITYTTLIDGSCKEGD 326
Query: 244 ---LFEKAERALKE 254
FE ER +KE
Sbjct: 327 LETAFELRERMIKE 340
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/285 (20%), Positives = 119/285 (41%), Gaps = 28/285 (9%)
Query: 13 IAKRSKKHLEEALYDRLFKKG--SSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKL 70
K + L ++++D + K G S VS +N ++K +GD + R
Sbjct: 146 FCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK---------LGDLDEGFR---- 192
Query: 71 YYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGS 128
L M G+ V ++ ++ + K +D A F ++ + N +T+ +
Sbjct: 193 ------LKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTT 246
Query: 129 LLNCYCKELMTEKAEALLEKMKELNLGFSS--MPFNSLMTLYAKTGHPEKIPAIIQEMKA 186
L++ +CK + A + +M LN GFS + +N+L+ K G ++ ++ EM
Sbjct: 247 LIDGHCKNGRLDLAMDIYRQM--LNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSR 304
Query: 187 SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE 246
+ PD TY + D+ A + E M ++ + D ++ L + G
Sbjct: 305 KGLKPDKITYTTLIDGSCKEGDLETAFELRERMIKES-IRLDDVVYTALIFGLCQEGRAV 363
Query: 247 KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 291
AE+ L+E+ D Y ++ + + G++ + + R ++
Sbjct: 364 DAEKMLREMLRVGLKPDDETYTMIMNEFCKKGDVKKASELLREMQ 408
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 53/109 (48%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ +TY +L++ CKE E A L E+M + ++ + + +L+ + G ++
Sbjct: 310 DKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKML 369
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWT 230
+EM + PD TY + M D+ A ++ EM+R+GRV T
Sbjct: 370 REMLRVGLKPDDETYTMIMNEFCKKGDVKKASELLREMQRNGRVPCVVT 418
>gi|225457182|ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Vitis vinifera]
Length = 869
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 162/378 (42%), Gaps = 30/378 (7%)
Query: 95 IHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKEL 152
I + ++ + ++ + F ++P + + ++ +L+N Y + + + LL++MK+
Sbjct: 151 IMIGVLGREGLLEKCQEIFDEMPSHGVAPSVFSFTALINAYGRNGQYKSSLELLDRMKKE 210
Query: 153 NLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISG 211
+ S + +N+++ A+ G E++ + +M+ I D TYN + A A
Sbjct: 211 RVSPSILTYNTVINSCARGGLDWEELLGLFAQMRHEGIQADIVTYNTLLSACARRGLGDE 270
Query: 212 AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 271
AE V M +G + D TT+S L + + EK LKE+E+ + D+++Y L+
Sbjct: 271 AEMVFRTMN-EGGILPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLL 329
Query: 272 TLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPG----AEKCFKEW 325
+ Q+G++ E ++R ++ A PN A S +L+NL G F E
Sbjct: 330 EAHAQSGSIKEAMGVFRQMQGAGCVPNAATYS------ILLNLYGRHGRYDDVRDLFLEM 383
Query: 326 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE--IFS--DYYLR 381
+ + N++I + + G + L +PN +T+E IF+ L
Sbjct: 384 KVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLH 443
Query: 382 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVD 441
K+ + EK + VPSS+ + + Q + A + +
Sbjct: 444 EDAKKILLHMNEKGV----------VPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGS 493
Query: 442 DLGVEVFEPLIRTYAAAG 459
VE + LI+ +A G
Sbjct: 494 KPTVETYNSLIQMFAKGG 511
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 80/381 (20%), Positives = 169/381 (44%), Gaps = 31/381 (8%)
Query: 119 TSKNHLTYGSLLN-CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
S + LTY +++N C L E+ L +M+ + + +N+L++ A+ G ++
Sbjct: 212 VSPSILTYNTVINSCARGGLDWEELLGLFAQMRHEGIQADIVTYNTLLSACARRGLGDEA 271
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
+ + M I+PD TY+ + +N + +++EM+ G D T+++ L
Sbjct: 272 EMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSF-PDITSYNVLLE 330
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF--P 295
+ ++G ++A ++++ + + Y L+ LYG+ G +V ++ ++++ P
Sbjct: 331 AHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEP 390
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV---------MIGAYAK 346
N A + +L+N+ G FKE + +D+ NV +I A K
Sbjct: 391 NAATYN------ILINVF---GEGGYFKEVVT--LFHDMVEENVEPNMETYEGLIFACGK 439
Query: 347 EGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKW 406
G E+A+++ +G P++K + + Y G L + L A +T G K
Sbjct: 440 GGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAY---GQAALYEEAL-VAFNTMNEVGSK- 494
Query: 407 VPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVML 466
P+ ET + ++ F + +E L + ++ + F +I + G+ +
Sbjct: 495 -PTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIK 553
Query: 467 RRLKMEKVEVSEASKKLLEAI 487
++MEK + ++ LEA+
Sbjct: 554 AYVEMEKARC-DPDEQTLEAV 573
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 56/297 (18%), Positives = 120/297 (40%), Gaps = 27/297 (9%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL--PETSKNHLTYGSLLN 131
A+ + M+ G + +I L+L + D + F+++ T N TY L+N
Sbjct: 341 AMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILIN 400
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ + ++ L M E N+ + + L+ K G E I+ M ++P
Sbjct: 401 VFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVP 460
Query: 192 DSYTYN----------VWMRALAAVNDIS--GAERVIEEMKRDGRVAADWTTFSNLASIY 239
S Y ++ AL A N ++ G++ +E T+++L ++
Sbjct: 461 SSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVE-------------TYNSLIQMF 507
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
+ GL++++E L ++ R+ + +I + Q G E + + + A +
Sbjct: 508 AKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDE 567
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
+ ++ V + +E+ F E ++ + +M+ YAK R ++A +L
Sbjct: 568 QTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCMMLAVYAKADRWDDAHQL 624
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 137/324 (42%), Gaps = 12/324 (3%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S N TY L+NC+C+ A A+L KM +L + NSL+ + +
Sbjct: 113 SHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVS 172
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
++ +M PDS+T+N + L N S A +++ M G D T+ + +
Sbjct: 173 LVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG-CQPDLVTYGIVVNGL 231
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNT 297
+ G + A LK++E + Y +I N+++ ++ + + PN
Sbjct: 232 CKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 291
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
++Y ++I+ L N A + + ++ + +I A+ KEG+L AE+L
Sbjct: 292 --VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 349
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 417
+ +R DP+ T+ + + + + A E I P+ T T +
Sbjct: 350 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK------DCFPNVVTYNTLI 403
Query: 418 RHFEQEKDVD-GAEGFLEILKKAV 440
+ F + K VD G E F E+ ++ +
Sbjct: 404 KGFCKAKRVDEGMELFREMSQRGL 427
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 115/286 (40%), Gaps = 36/286 (12%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TYG ++N CK + A +LL+KM++ + + +N+++ + + E
Sbjct: 222 VTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTE 281
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M I P+ TYN +R L S A R++ +M + ++ + TFS L +V+ G
Sbjct: 282 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI-ERKINPNVVTFSALIDAFVKEG 340
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTAN-- 299
+AE+ E+ R+ D+ Y LI + L E ++ + + FPN
Sbjct: 341 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 400
Query: 300 -------------------------------ISYLNMIQVLVNLKDLPGAEKCFKEWESG 328
++Y +I ++ A+ FK+ S
Sbjct: 401 TLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSD 460
Query: 329 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 374
DI ++++ G++E A + E +R +P+ T+ I
Sbjct: 461 GVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNI 506
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 147/357 (41%), Gaps = 15/357 (4%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
AL L + ME+ + V +D + + ++ A N F ++ N +TY SL+
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C C A LL M E + + + F++L+ + K G + + EM SI P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 359
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
D +TY+ + + + A+ + E M +D + T++ L + +A ++
Sbjct: 360 DIFTYSSLINGFCMHDRLDEAKHMFELMISKD--CFPNVVTYNTLIKGFCKAKRVDEGME 417
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTANISYLNMIQV 308
+E+ R + Y LI + Q +++ + P+ ++Y ++
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDI--MTYSILLDG 475
Query: 309 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 368
L N + A F+ + DI N+MI K G++E+ +L +G PN
Sbjct: 476 LCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 535
Query: 369 AKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKD 425
T+ + R G +K D L + + + +G +P S T T +R ++ D
Sbjct: 536 VVTYTTMMSGFCRKG-LKEEADALFREM---KEEGP--LPDSGTYNTLIRAHLRDGD 586
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/259 (19%), Positives = 105/259 (40%), Gaps = 39/259 (15%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL--PETSKNHLTYGSLLN 131
A KL + M KR ++ + + ++ +D A++ F + + N +TY +L+
Sbjct: 345 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 404
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+CK ++ L +M + L +++ + +L+ + + + + ++M + ++P
Sbjct: 405 GFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLP 464
Query: 192 DSYTYNVWMRALAAVN-------------------DISGAERVIEEMKRDGRVAADW--- 229
D TY++ + L DI +IE M + G+V W
Sbjct: 465 DIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 230 ------------TTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQT 277
T++ + S + GL E+A+ +E++ D Y LI + +
Sbjct: 525 CSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRD 584
Query: 278 GN---LSEVYRIWRSLRLA 293
G+ +E+ R RS R
Sbjct: 585 GDKAASAELIREMRSCRFV 603
>gi|297843920|ref|XP_002889841.1| hypothetical protein ARALYDRAFT_888388 [Arabidopsis lyrata subsp.
lyrata]
gi|297335683|gb|EFH66100.1| hypothetical protein ARALYDRAFT_888388 [Arabidopsis lyrata subsp.
lyrata]
Length = 665
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 119/259 (45%), Gaps = 2/259 (0%)
Query: 124 LTYGSLL-NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQ 182
+TY +LL C + KA L+ ++ + S+ + +++ + A G E+ IQ
Sbjct: 203 ITYNTLLAGCIKVKNGYPKAVELIGELPHNGIQMDSVMYGTVLAICASNGRCEEAENFIQ 262
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
+MKA P+ Y Y+ + + + D A+ ++ EMK G V + + L +Y++
Sbjct: 263 QMKAEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVP-NKVMMTTLLKVYIKG 321
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY 302
GLF+++ L ELE+ + Y L+ + G L E I+ ++ + +
Sbjct: 322 GLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVKSDGYAN 381
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
MI L K A++ ++ E+ D+ + N M+ AY + G +E+ + ++
Sbjct: 382 SIMISALCRSKRFEEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDE 441
Query: 363 RGADPNAKTWEIFSDYYLR 381
+ P+ T+ I Y+++
Sbjct: 442 QAIIPDYNTFHILIKYFIK 460
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 98/222 (44%), Gaps = 4/222 (1%)
Query: 72 YP-ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGS 128
YP A++L + G+ L + A + AEN+ + S N Y S
Sbjct: 219 YPKAVELIGELPHNGIQMDSVMYGTVLAICASNGRCEEAENFIQQMKAEGHSPNIYHYSS 278
Query: 129 LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS 188
LLN Y + +KA+ L+ +MK + L + + +L+ +Y K G ++ ++ E++++
Sbjct: 279 LLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAG 338
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
+ Y + M L+ + A + ++MK G V +D S + S + FE+A
Sbjct: 339 YAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKG-VKSDGYANSIMISALCRSKRFEEA 397
Query: 249 ERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
+ ++ E DL ++ Y + G + V R+ + +
Sbjct: 398 KELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKM 439
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 58/300 (19%), Positives = 108/300 (36%), Gaps = 45/300 (15%)
Query: 162 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV-NDISGAERVIEEMK 220
NS+++ K G + + +MK + PD TYN + V N A +I E+
Sbjct: 171 NSILSCLVKNGKLDSCIKLFDQMKRGGLKPDVITYNTLLAGCIKVKNGYPKAVELIGELP 230
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
+G + D + + +I G E+AE +++++ ++ Y L+ Y G+
Sbjct: 231 HNG-IQMDSVMYGTVLAICASNGRCEEAENFIQQMKAEGHSPNIYHYSSLLNSYSWKGDY 289
Query: 281 ---SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD----------------------- 314
E+ +S+ L PN ++ L + + L D
Sbjct: 290 KKADELMTEMKSIGLV-PNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCM 348
Query: 315 ----------LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
L A F + + D ++MI A + R E A+EL +
Sbjct: 349 LMDGLSKAGKLEEARSIFDDMKGKGVKSDGYANSIMISALCRSKRFEEAKELSRDSETTY 408
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 424
+ Y R G+M+ + ++K D +P T +++F +EK
Sbjct: 409 EKCDLVMLNTMLCAYCRAGEMESVMRMMKKM------DEQAIIPDYNTFHILIKYFIKEK 462
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 128/321 (39%), Gaps = 3/321 (0%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELM 138
M RG+ V + + K Q +D A + + N TY S+++ YC
Sbjct: 225 MLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
++A L+KM + + +NSLM K G + + M + P+ TY
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
++ A + +++ M R+G + + FS L Y + G ++A ++ +
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVRNG-IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQ 403
Query: 259 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 318
+ D Y +I + ++G + + R + + + NI Y ++I L A
Sbjct: 404 GLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKA 463
Query: 319 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 378
++ E D N +I ++ KEGR+ +E+L + R G PN T+ D
Sbjct: 464 KELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDG 523
Query: 379 YLRNGDMKLAVDCLEKAIDTG 399
Y G M A L + G
Sbjct: 524 YCLAGKMDEATKLLASMVSVG 544
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/317 (19%), Positives = 136/317 (42%), Gaps = 13/317 (4%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A+ + M ++G+N + ++ K ++ A YF + + S ++ Y SL++
Sbjct: 393 AMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C +KA+ L+ +M + + ++ FNS++ + K G + + M + P
Sbjct: 453 SLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 512
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ TY+ + + A +++ M G + D T++ L + Y + E A
Sbjct: 513 NIITYSTLIDGYCLAGKMDEATKLLASMVSVG-MKPDCVTYNTLINGYCKISRMEDALVL 571
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV- 310
+E+E+ D+ Y ++ QT + ++ + + +Y ++ L
Sbjct: 572 FREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK 631
Query: 311 -NLKDLPGAEKCFKEWESGCAT---YDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD 366
NL D + + +++ C T + R N+MIGA K GR + A++L G
Sbjct: 632 NNLTD-----EALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLV 686
Query: 367 PNAKTWEIFSDYYLRNG 383
P+ +T+ + ++ + G
Sbjct: 687 PDVRTYSLMAENLIEQG 703
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/305 (20%), Positives = 124/305 (40%), Gaps = 5/305 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL---PETSKNHLTYGSLL 130
A K+ ++M KRG+ ++ L A +G + +DL NH + L+
Sbjct: 323 ARKMFDSMTKRGLKPEITTYGTLLQGYA-TKGALVEMHGLLDLMVRNGIHPNHYVFSILI 381
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
Y K+ ++A + KM++ L ++ + +++ + K+G E ++M +
Sbjct: 382 CAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLS 441
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
P + YN + +L + A+ +I EM G + D F+++ + + G ++E+
Sbjct: 442 PGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG-ICLDTIFFNSIIDSHCKEGRVIESEK 500
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
+ ++ Y LI Y G + E ++ S+ ++Y +I
Sbjct: 501 LFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYC 560
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
+ + A F+E ES + DI N+++ + R A+EL G
Sbjct: 561 KISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELS 620
Query: 371 TWEIF 375
T+ I
Sbjct: 621 TYNII 625
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/274 (19%), Positives = 117/274 (42%), Gaps = 36/274 (13%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
++Y +++N + KE +KA +M + + + + +NS++ K +K ++
Sbjct: 200 VSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTS 259
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + +MP+ TYN + + A +++M DG V D T+++L + G
Sbjct: 260 MVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDG-VEPDVVTYNSLMDYLCKNG 318
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
+A + + R +++ Y L+ Y G L E++ + L L N + ++
Sbjct: 319 RCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGL---LDLMVRNGIHPNHY 375
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
V +++I AYAK+G+++ A + + R++
Sbjct: 376 --------------------------------VFSILICAYAKQGKVDQAMLVFSKMRQQ 403
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
G +P+ T+ ++G ++ A+ E+ ID
Sbjct: 404 GLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMID 437
>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Brachypodium distachyon]
Length = 676
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 156/379 (41%), Gaps = 21/379 (5%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK---NHLTYGSLL 130
A + E M +G+ V ++ + K+ + A F+ L ++S N TY ++
Sbjct: 274 AFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMI 333
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
YCKE +AE LL +M E L ++ + +L++ + K G ++ +M+
Sbjct: 334 GGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQ 393
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
P+ YTYN + L I A +V+ G + D T++ + + + + G A
Sbjct: 394 PNIYTYNALIDGLCKKGKIQEAYKVLRMANNQG-LQLDKVTYTVMITEHCKQGHITYALD 452
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW-RSLRLAFPNTANISYLNMIQVL 309
+ H D+ Y LI Y Q + E +++ + L + T +Y +MI
Sbjct: 453 LFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQ-TYTSMIAGY 511
Query: 310 VNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 368
+ A + F+ ++GC I +I KE RLE A L E + P
Sbjct: 512 CKVGKSTSALRVFERMVQNGCQADSI-TYGALISGLCKESRLEEARALYEGMLDKRLVPC 570
Query: 369 AKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDG 428
T + Y R +AV L++ +D R + T+ +R V+
Sbjct: 571 EVTPVTLAFEYCRREKAVVAVSILDR-LDKRR--------KNHTVNVLVRKLSAIGHVED 621
Query: 429 AEGFLEILKKAVD-DLGVE 446
A F LKKA+D DL V+
Sbjct: 622 ASLF---LKKALDVDLAVD 637
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 118/283 (41%), Gaps = 4/283 (1%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK-I 177
T N + Y + ++ CK ++A +LE+M L + SL+ K G E+
Sbjct: 251 TPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAF 310
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
++ +K+SS P+ +TY V + ++ AE ++ M G +A + T++ L S
Sbjct: 311 RLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQG-LAPNTNTYTTLIS 369
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
+ + G F A + ++ ++ Y LI + G + E Y++ R
Sbjct: 370 GHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQL 429
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
++Y MI + A F E+GC DI +I Y ++ ++E +++L
Sbjct: 430 DKVTYTVMITEHCKQGHITYALDLFNRMAENGCHP-DIHTYTTLIARYCQQRQMEESQKL 488
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
++ P +T+ Y + G A+ E+ + G
Sbjct: 489 FDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNG 531
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/288 (17%), Positives = 113/288 (39%), Gaps = 6/288 (2%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
T ++ +C++ L +M E+ + + + + + K + ++ +++EM
Sbjct: 222 TCTVIVRVFCQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEM 281
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
A + P+ YT+ + L + A R+ ++ + + T++ + Y + G
Sbjct: 282 VAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGK 341
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+AE L + + + + Y LI+ + + G+ + + + +R +Y
Sbjct: 342 LARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNA 401
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+I L + A K + + D VMI + K+G + A +L R G
Sbjct: 402 LIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENG 461
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSET 412
P+ T+ Y + M+ + +K + + VP+ +T
Sbjct: 462 CHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAI------ELVPTKQT 503
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 58/322 (18%), Positives = 130/322 (40%), Gaps = 30/322 (9%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
++ +L+ C++ E+ +ALL M+ + ++ ++ + G + + + M
Sbjct: 187 SFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSELFRRM 246
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
P+ Y W+ L + A V+EEM G + + T ++L + + G
Sbjct: 247 LEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKG-LKPNVYTHTSLINGLCKIGW 305
Query: 245 FEKAERALKELENRNAHR-DLSAYQFLITLYGQTGNLSEV-YRIWRSLRLAF-PNTANIS 301
E+A R +L ++++ ++ Y +I Y + G L+ + R + PNT
Sbjct: 306 TERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNT---- 361
Query: 302 YLNMIQVLVNLKDLPGAEKCFKE---------WESGCATYDIRVTNVMIGAYAKEGRLEN 352
N L++ G+ C E ++ TY N +I K+G+++
Sbjct: 362 --NTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTY-----NALIDGLCKKGKIQE 414
Query: 353 AEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSET 412
A ++ A +G + T+ + + + G + A+D + + G P T
Sbjct: 415 AYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENG------CHPDIHT 468
Query: 413 IRTFMRHFEQEKDVDGAEGFLE 434
T + + Q++ ++ ++ +
Sbjct: 469 YTTLIARYCQQRQMEESQKLFD 490
>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 831
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/373 (21%), Positives = 142/373 (38%), Gaps = 53/373 (14%)
Query: 129 LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS 188
L+N Y K A A E M+ + + + +L+ YA A ++EM+A
Sbjct: 198 LVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEEMEAEG 257
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADW----TTFSNLASIYVEAGL 244
+ P++ TY+V + + D+ AER + ++ +W ++N+ Y +AG
Sbjct: 258 VSPNAATYSVIISGYGRLGDVEAAERWFQRA-----LSENWHHNDVIYNNIIHAYCKAGN 312
Query: 245 FEKAERALKELENR--------------------------NAHRDLSA------------ 266
E+AE + +E + N R L A
Sbjct: 313 MERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPTVVS 372
Query: 267 YQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE 326
Y LI LY + G + + +I + +Y +I V L D A F++
Sbjct: 373 YGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMS 432
Query: 327 SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 386
+ D N+++ A+ K G++ A EL R P +T+ I D +++ GD++
Sbjct: 433 NAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMKIGDLR 492
Query: 387 LAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVE 446
+A + + G + PS+ T M Q +D A ++ + A
Sbjct: 493 MAFETVRDMKMAG------FRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNER 546
Query: 447 VFEPLIRTYAAAG 459
+ LI YA G
Sbjct: 547 SYTTLIEGYACIG 559
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/383 (19%), Positives = 157/383 (40%), Gaps = 12/383 (3%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLT-----YGSLLNCYCK 135
ME++G+ T+ + +D + +D N F L ++ L+ YG L+N Y K
Sbjct: 323 MEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPTVVSYGCLINLYSK 382
Query: 136 ELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYT 195
+KA + +M++ + + ++ ++ Y + G ++ ++M + I PD T
Sbjct: 383 LGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGIT 442
Query: 196 YNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 255
YN+ M A ++ A ++ M+ G T++ + +++ G A ++++
Sbjct: 443 YNILMNAFCKNGQMNRALELLARME-SGDCPPTLRTYTIIIDGFMKIGDLRMAFETVRDM 501
Query: 256 ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDL 315
+ + Y ++ Q G + I + +A + SY +I+ + D+
Sbjct: 502 KMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNERSYTTLIEGYACIGDM 561
Query: 316 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 375
A K F + D+ ++ A K GR+++ + G N + I
Sbjct: 562 GLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAITAEMAAAGVPMNNYIYNIL 621
Query: 376 SDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEI 435
D + + GDM A D ++K G P + +F+ + D+ A +E
Sbjct: 622 LDGWAQRGDMWEASDIMQKMRHEG------LTPDIHSYTSFINACCKAGDMLKATETIEQ 675
Query: 436 LKKAVDDLGVEVFEPLIRTYAAA 458
+K+ ++ + LI +A+A
Sbjct: 676 MKQQGVQPNLQAYTTLIHGWASA 698
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 76/405 (18%), Positives = 156/405 (38%), Gaps = 41/405 (10%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFV-DLPET-SKNHLTYGSLLN 131
A+ E ME G++ + ++ + ++ ++AAE +F L E N + Y ++++
Sbjct: 246 AIACVEEMEAEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIH 305
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
YCK E+AEA++ M+E L + +N LM Y +K + + +KA
Sbjct: 306 AYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKA----- 360
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ + ++ ++ L ++Y + G +KA +
Sbjct: 361 ----------------------------RTETGLSPTVVSYGCLINLYSKLGKMDKALQI 392
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
E+E++ + Y +I Y Q G+ + + ++ + A I+Y ++
Sbjct: 393 SNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNILMNAFCK 452
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+ A + ESG +R ++I + K G L A E + G P+A T
Sbjct: 453 NGQMNRALELLARMESGDCPPTLRTYTIIIDGFMKIGDLRMAFETVRDMKMAGFRPSAAT 512
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG 431
+ + + G M A +++ + G P+ + T + + D+ A
Sbjct: 513 YNVIMHGLAQAGQMDRAASIIDEMVVAGVH------PNERSYTTLIEGYACIGDMGLAFK 566
Query: 432 FLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEV 476
+ +K+ V + L++ AGR + +M V
Sbjct: 567 YFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAITAEMAAAGV 611
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 68/149 (45%), Gaps = 1/149 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+ Y SLL CK + A+ +M + ++ +N L+ +A+ G + I+Q+
Sbjct: 581 IAYASLLKACCKAGRMQSTLAITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQK 640
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ + PD ++Y ++ A D+ A IE+MK+ G V + ++ L + A
Sbjct: 641 MRHEGLTPDIHSYTSFINACCKAGDMLKATETIEQMKQQG-VQPNLQAYTTLIHGWASAS 699
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLIT 272
EKA E+++ D Y ++T
Sbjct: 700 YPEKALICYDEMKSAGMIPDKPLYHCIMT 728
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 53/122 (43%)
Query: 267 YQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE 326
+ L+ YG+ G+ + S+R A SY N+I +DL GA C +E E
Sbjct: 195 HTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEEME 254
Query: 327 SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 386
+ + + +V+I Y + G +E AE +RA N + Y + G+M+
Sbjct: 255 AEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCKAGNME 314
Query: 387 LA 388
A
Sbjct: 315 RA 316
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 7/113 (6%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
+Y S +N CK KA +E+MK+ + + + +L+ +A +PEK EM
Sbjct: 652 SYTSFINACCKAGDMLKATETIEQMKQQGVQPNLQAYTTLIHGWASASYPEKALICYDEM 711
Query: 185 KASSIMPDSYTYNVWMRAL---AAV---NDISGAERVIEEMKRDGRVAADWTT 231
K++ ++PD Y+ M +L AAV G RV EM G + D+ T
Sbjct: 712 KSAGMIPDKPLYHCIMTSLLSRAAVARETVFDGVLRVTSEMVDQG-ICVDFAT 763
>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
Length = 1128
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 118/277 (42%), Gaps = 3/277 (1%)
Query: 101 AKVQGIDAAENYFVDL--PETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSS 158
AK+ D + +F D+ + TY +++C KE E A L E+MK L +
Sbjct: 109 AKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDT 168
Query: 159 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 218
+ +NS++ Y K G + +EMK+ S PD TYN + + E
Sbjct: 169 VTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYRE 228
Query: 219 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 278
MK+ G + + ++S L + + + ++A + ++ + Y L+ + G
Sbjct: 229 MKQSG-LKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIG 287
Query: 279 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 338
NLS+ +R+ + ++Y +I L + + + AEK F + + ++ N
Sbjct: 288 NLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYN 347
Query: 339 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 375
+I + K ++ A EL + RG P+ + F
Sbjct: 348 ALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTF 384
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 119/300 (39%), Gaps = 7/300 (2%)
Query: 138 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 197
M E+A KMK + + N L+ +AK G + + ++M + P +TYN
Sbjct: 78 MLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYN 137
Query: 198 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 257
+ + + DI A + EEMK G + D T++++ Y + G + +E+++
Sbjct: 138 IMIDCMWKEGDIEAARGLFEEMKFRGLI-PDTVTYNSMIDGYGKVGRLDDTVYFFEEMKS 196
Query: 258 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 317
+ D+ Y LI + ++G L + +R ++ + +SY ++ +
Sbjct: 197 MSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQ 256
Query: 318 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 377
A K + + + ++ A K G L +A L G + N T+ D
Sbjct: 257 AIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALID 316
Query: 378 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 437
MK A K + G +P+ + + F + K++D A L LK
Sbjct: 317 GLCDAERMKEAEKLFGKMVTAG------VIPNLASYNALIHGFVKAKNMDRALELLNELK 370
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 115/278 (41%), Gaps = 35/278 (12%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY +L++ C ++AE L KM + + +N+L+ + K + ++ ++
Sbjct: 307 NVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELL 366
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
E+K I PD Y ++ L + I A+ V+ EM+ +G + A+ ++ L Y +
Sbjct: 367 NELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENG-IKANTLIYTTLMDAYFK 425
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
+G + L+E++ + +++ F + + G N +L + I
Sbjct: 426 SGNPTEGLHLLEEMQELD--HEVTVVTFCVLIDGLCKN-----------KLV---SKAID 469
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y + L+ P A V MI KE +++ A L E+
Sbjct: 470 YFGRMSNDFGLQ--PNAA----------------VYTAMIDGLCKENQVKAATTLFEQMA 511
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ G P+ + D L+ G+M A+ +K + G
Sbjct: 512 QEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIG 549
Score = 45.4 bits (106), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 31/157 (19%), Positives = 64/157 (40%)
Query: 229 WTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWR 288
+ F L S+ ++ G+ E+A + +++ + L+ + + G V R ++
Sbjct: 63 FGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFK 122
Query: 289 SLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEG 348
+ A +Y MI + D+ A F+E + D N MI Y K G
Sbjct: 123 DMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVG 182
Query: 349 RLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 385
RL++ E + +P+ T+ + + ++G +
Sbjct: 183 RLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKL 219
>gi|186478941|ref|NP_174121.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332192779|gb|AEE30900.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 388
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 136/283 (48%), Gaps = 10/283 (3%)
Query: 21 LEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSEN 80
L E + R+ G V L+++LK K + + + L + + + AL++SE
Sbjct: 31 LNETSHSRIMALGREQKKVTPPLDEWLKRGKDLNPAVLRGLINSLCESQRFNHALQVSEW 90
Query: 81 MEKRGM-NKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMT 139
+ KRG+ + + D A L LV G+ AE +F +PE ++ + +LL+ Y T
Sbjct: 91 ITKRGIFDLSTEDFASRLCLVEISTGLKEAEKFFKSIPENMRDDSVHTTLLSLYTISKKT 150
Query: 140 -EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPD-SYTYN 197
+AEA + M+ N+ P+ S++ LYA G I I+++MK + + D + T N
Sbjct: 151 RHEAEATYQTMRVQNMLLKPYPYYSMIYLYALLGEKNMIDEILRQMKENGVEHDKNLTAN 210
Query: 198 VWMRALAAVNDISGAERVIEEMK-RDGRVAADWTTFSNLASIYVEAGLFEKAERALK--E 254
++A A++ D+ E + ++ + R + W T ++A Y++ G KA L+ E
Sbjct: 211 NVLKAYASLPDVEAMEMFLMGLEVEEPRFSLAWQTGISIAKAYLKGGSSRKAVEMLRRTE 270
Query: 255 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
L +D SA + L+ +Y G + R+ RL +P +
Sbjct: 271 LVVDTKSKD-SANKVLMMMYWDAGAKQDASRLS---RLIYPKS 309
>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 116/267 (43%), Gaps = 10/267 (3%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA-I 180
N Y ++++ Y + +A + + MK+ + + +N+++ K G K I
Sbjct: 234 NVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKQALDI 293
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISG----AERVIEEMKRDGRVAADWTTFSNLA 236
EM+ + PD T+N +L AV G ++RV EM+R G + D TF+ L
Sbjct: 294 FDEMQKEGVEPDRITFN----SLIAVCSRGGLWEDSQRVFAEMQRRG-IEQDIFTFNTLI 348
Query: 237 SIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPN 296
+ G E A + + +N ++ Y +I YG+ G E ++ ++ +
Sbjct: 349 DAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGVR 408
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
+SY +I + L A K+ E D+ N +I AY K+G+ ++A L
Sbjct: 409 PDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAYGKQGKYKDAACL 468
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNG 383
++ + G PN T+ D Y + G
Sbjct: 469 FDKMKGEGLVPNVLTYSALIDSYSKAG 495
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 135/316 (42%), Gaps = 10/316 (3%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGID--AAENYFVDLPE--TSKNHLTYGSL 129
ALK+ + M+K G + +D K G+D A + F ++ + + +T+ SL
Sbjct: 254 ALKVFQAMKKAGCKPNLITYNTIIDACGK-GGVDLKQALDIFDEMQKEGVEPDRITFNSL 312
Query: 130 LNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
+ + + E ++ + +M+ + FN+L+ K G E +I+ M+ +I
Sbjct: 313 IAVCSRGGLWEDSQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNI 372
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
P+ TY+ + + A + +MK G V D +++ L IY + G F+ A
Sbjct: 373 SPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESG-VRPDRVSYNTLIDIYAKLGRFDDAL 431
Query: 250 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQ 307
A K++E D+ Y LI YG+ G + ++ ++ PN ++Y +I
Sbjct: 432 IACKDMERVGLKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNV--LTYSALID 489
Query: 308 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
F E++ D+ + + +I + K G +E+A L + + G P
Sbjct: 490 SYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQP 549
Query: 368 NAKTWEIFSDYYLRNG 383
N T+ D Y R G
Sbjct: 550 NIVTYNSLIDAYGRYG 565
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 121/274 (44%), Gaps = 22/274 (8%)
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
E A + + ++ G + ++++++ Y ++G + + Q MK + P+ TYN
Sbjct: 216 VEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNT 275
Query: 199 WMRALAAVN-DISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 257
+ A D+ A + +EM+++G V D TF++L ++ GL+E ++R E++
Sbjct: 276 IIDACGKGGVDLKQALDIFDEMQKEG-VEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQR 334
Query: 258 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 317
R +D+ + LI + G + I ++R + ++Y MI D G
Sbjct: 335 RGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMI-------DGYG 387
Query: 318 AEKCFKEW--------ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
CF+E ESG D N +I YAK GR ++A + R G +
Sbjct: 388 KLGCFEEAISLYHDMKESGVRP-DRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADV 446
Query: 370 KTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDG 403
T+ D Y + G K A CL D +G+G
Sbjct: 447 VTYNALIDAYGKQGKYKDAA-CL---FDKMKGEG 476
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 92/204 (45%), Gaps = 3/204 (1%)
Query: 70 LYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL--PETSKNHLTYG 127
L+ + ++ M++RG+ + + +D V K ++ A + + S N +TY
Sbjct: 321 LWEDSQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYS 380
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 187
++++ Y K E+A +L MKE + + +N+L+ +YAK G + ++M+
Sbjct: 381 TMIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERV 440
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
+ D TYN + A A + ++MK +G V + T+S L Y +AG+ +
Sbjct: 441 GLKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLV-PNVLTYSALIDSYSKAGMHQD 499
Query: 248 AERALKELENRNAHRDLSAYQFLI 271
E + D+ Y LI
Sbjct: 500 VSNVFTEFKRAGLKPDVVLYSSLI 523
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 134/331 (40%), Gaps = 39/331 (11%)
Query: 154 LGFSSMPFNSLMTLYAKTGHP----EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDI 209
L S P NS L K H E P +++E+ W RAL
Sbjct: 139 LSAPSTPLNSTALLLEKWSHQLVGLEDFPYLLRELG---------NRGEWERAL------ 183
Query: 210 SGAERVIEEMKRDGRVAADWTTFSNLASIYVEA-GLFEKAERALKELENR----NAHRDL 264
G E +++++ + ++W S LASI + G K E AL ++ NR ++
Sbjct: 184 QGYEWMVQQV----HLRSEW---SKLASIMISTLGRLGKVEIAL-DVFNRAQKAGFGNNV 235
Query: 265 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLK-DLPGAEKCFK 323
AY +++ YG++G E +++++++ A I+Y +I DL A F
Sbjct: 236 YAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKQALDIFD 295
Query: 324 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
E + D N +I ++ G E+++ + +RRG + + T+ D + G
Sbjct: 296 EMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQRRGIEQDIFTFNTLIDAVCKGG 355
Query: 384 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDL 443
M+LA + T RG P+ T T + + + + A +K++
Sbjct: 356 QMELAASIMT----TMRGK--NISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGVRP 409
Query: 444 GVEVFEPLIRTYAAAGRTSPVMLRRLKMEKV 474
+ LI YA GR ++ ME+V
Sbjct: 410 DRVSYNTLIDIYAKLGRFDDALIACKDMERV 440
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 53/119 (44%), Gaps = 2/119 (1%)
Query: 71 YYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGS 128
Y A L + M+ G+ V + +D +K N F + + + Y S
Sbjct: 462 YKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSS 521
Query: 129 LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 187
L++ CK + E A LL++M + + + + +NSL+ Y + G +K+ A+ M S
Sbjct: 522 LIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRYGQADKLEAVKANMPNS 580
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 150/358 (41%), Gaps = 15/358 (4%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSS--MPFNSLMTLYAKTGHPEKI 177
S +T L+N YCK + +AL +E+ GF + F++ + + GH +
Sbjct: 263 SPTSVTVNVLINGYCK--LGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHA 320
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
++ M PD YTY+ + L ++ A+ ++ +M G + D TTF+ L
Sbjct: 321 LKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLP-DTTTFNTLIV 379
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
E+A +EL + ++ + LI + G+ R++ ++ +
Sbjct: 380 ALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTP 439
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWE-SGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
++Y +I L + L A KE E SGC + N +I K R+E AEE+
Sbjct: 440 DEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTV-TYNTIIDGLCKRRRIEEAEEV 498
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTF 416
++ G NA T+ D + A + +++ I G P++ T +
Sbjct: 499 FDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEG------LQPNNVTYNSI 552
Query: 417 MRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPV--MLRRLKME 472
+ H+ ++ ++ A L+ + ++ V + LI A RT +LR ++M+
Sbjct: 553 LTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMK 610
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 120/307 (39%), Gaps = 43/307 (14%)
Query: 93 QAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKEL 152
Q H+D KV G+ E D+ TY +++NC C E+A+ ++ +M +
Sbjct: 313 QNGHVDHALKVLGLMLQEGCEPDV-------YTYSTVINCLCNNGELEEAKGIVNQMVDS 365
Query: 153 NLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA 212
+ FN+L+ E+ + +E+ + P+ YT+N+ + AL V D A
Sbjct: 366 GCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLA 425
Query: 213 ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLIT 272
R+ EEMK G D T++ L +G KA LKE+E +
Sbjct: 426 VRLFEEMKSSG-CTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQ---------- 474
Query: 273 LYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY 332
+ ++Y +I L + + AE+ F + +
Sbjct: 475 -------------------------STVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGR 509
Query: 333 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 392
+ N +I R+++A EL ++ G PN T+ +Y + G++ A D L
Sbjct: 510 NAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADIL 569
Query: 393 EKAIDTG 399
+ G
Sbjct: 570 QTMTANG 576
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 103/275 (37%), Gaps = 38/275 (13%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
+N L+T+ A+ + + + EM + I PD T+N + AL A ++EEM
Sbjct: 164 YNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMS 223
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
VA D TTF+ L +VE G E A R + LI Y + G +
Sbjct: 224 -SCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRV 282
Query: 281 S--------EVYRIWRSLRLAFPNTAN---------------------------ISYLNM 305
E+ + R+ F N +Y +
Sbjct: 283 GDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTV 342
Query: 306 IQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
I L N +L A+ + +SGC D N +I A E +LE A +L +G
Sbjct: 343 INCLCNNGELEEAKGIVNQMVDSGCLP-DTTTFNTLIVALCTENQLEEALDLARELTVKG 401
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
PN T+ I + + GD LAV E+ +G
Sbjct: 402 LSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSG 436
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 2/152 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
AL L + ME G ++ +D + K + I+ AE F +D+ +N +T+ +L++
Sbjct: 460 ALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLID 519
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C + A L+++M L +++ +NS++T Y K G+ K I+Q M A+
Sbjct: 520 GLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEV 579
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
D TY + L A +++ M+ G
Sbjct: 580 DVVTYATLINGLCKARRTQAALKLLRGMRMKG 611
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 68/146 (46%), Gaps = 4/146 (2%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +L+N CK T+ A LL M+ + + +N ++ + + ++ +E
Sbjct: 582 VTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFRE 641
Query: 184 MKASSIMPDSYTYNVWMRALA-AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
M PD++TY + R L I A + EM +G + ++++F LA +
Sbjct: 642 MTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFI-PEFSSFRMLAEGLLNL 700
Query: 243 GLFEKAERALKELENRNAHR--DLSA 266
G+ + RA++ + + R D+SA
Sbjct: 701 GMDDYLIRAIELIVEKANFRESDISA 726
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 121/260 (46%), Gaps = 5/260 (1%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
S N +TY +L+ C+E+ +A ++++MK + + + +N+L+ + G K
Sbjct: 299 VSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKAL 358
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
++ +++K+ + P TYNV + D SGA ++++EM+ G + T++ L
Sbjct: 359 SLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERG-IKPSKVTYTILIDT 417
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPN 296
+ + E A + +E D+ Y LI + G ++E R+++S+ ++ PN
Sbjct: 418 FARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPN 477
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
+ Y MI A + F++ E ++ + +I KE +L+ AE+L
Sbjct: 478 --EVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDL 535
Query: 357 KERARRRGADPNAKTWEIFS 376
E+ G DP+ + S
Sbjct: 536 VEKMIDSGIDPSDTICNLIS 555
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 126/286 (44%), Gaps = 5/286 (1%)
Query: 106 IDAAENYFVDLPET--SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNS 163
I+ + + V+L E S N + Y +L++ CK+ EKA+ L +M + L + +
Sbjct: 179 IEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTV 238
Query: 164 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
L+ K G ++ + ++M+ + P+ YTYN M L A +V +EM+ G
Sbjct: 239 LIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERG 298
Query: 224 RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 283
V+ + T++ L +A + + ++++ + +L Y LI + G L +
Sbjct: 299 -VSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKA 357
Query: 284 YRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES-GCATYDIRVTNVMIG 342
+ R L+ + + ++Y ++ D GA K KE E G + T ++I
Sbjct: 358 LSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYT-ILID 416
Query: 343 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 388
+A+ +E A +L+ G P+ T+ + + G M A
Sbjct: 417 TFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEA 462
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 4/166 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
A K+ + ME+RG+ + I +D A+ ++ A + E + TY L++
Sbjct: 392 AAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIH 451
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C + +A L + M E L + + +N+++ Y K G + + ++M+ + P
Sbjct: 452 GFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAP 511
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
+ +Y+ +R L + AE ++E+M G +D T NL S
Sbjct: 512 NVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSD--TICNLIS 555
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 137/342 (40%), Gaps = 11/342 (3%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
+ N TY S++ KE E++ +LE+M FN +M +A++ + EK
Sbjct: 7 AANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKARE 66
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+ Q M S PD+ +Y++ + LA + + + +++ EM G+ + +S+L
Sbjct: 67 VYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPS-MQAYSSLVRAL 125
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNT 297
+A + A E+ H D + LI Q G + + ++ + PN
Sbjct: 126 AKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNV 185
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
Y ++ L + L A F E +S + D+ N ++ A K R+E +L
Sbjct: 186 P--VYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLF 243
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 417
E R G PN T+ R G+++ A++ ++ G P+ T T +
Sbjct: 244 EAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAG------CKPNKYTYTTLI 297
Query: 418 RHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
+ + V A E + +A + LI Y G
Sbjct: 298 SGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRG 339
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 131/320 (40%), Gaps = 4/320 (1%)
Query: 79 ENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKE 136
+ M K G V + L + ++ A F ++ S + +TY +LL+ CK
Sbjct: 174 KQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKA 233
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 196
E+ L E M+ + + F++L+ +TG EK + M + P+ YTY
Sbjct: 234 RRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTY 293
Query: 197 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 256
+ L + A + E+M + + D +++L + Y + G ++AE+ +E+
Sbjct: 294 TTLISGLCRAEKVIQARELFEKMTQ-ACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMS 352
Query: 257 -NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDL 315
+ + LI + + G L + + + +Y +I L L
Sbjct: 353 GGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKL 412
Query: 316 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 375
A + +K+ D +G K G ++ A + E R+ GA PN +T+ I
Sbjct: 413 DEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRIL 472
Query: 376 SDYYLRNGDMKLAVDCLEKA 395
S+ ++ G ++ A +E A
Sbjct: 473 SESLIKLGRVEDAQKLMEPA 492
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 122/305 (40%), Gaps = 4/305 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK--NHLTYGSLLN 131
+LK+ M RG ++ + + +AK + +D A + F ++ + L + L+
Sbjct: 99 SLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELIL 158
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C+ + A ++M + + +N L+ +G E+ + EMK+ S P
Sbjct: 159 GLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSP 218
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D TYN + A+ + ++ E M+ G V + TFS L G EKA
Sbjct: 219 DVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYV-PNVITFSTLIHGLCRTGELEKALEV 277
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
+ + Y LI+ + + + ++ + A ++Y ++I
Sbjct: 278 FGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCK 337
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVT-NVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
+ AEK ++E G VT N +I + K G+L A EL +G ++
Sbjct: 338 RGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSC 397
Query: 371 TWEIF 375
T+ I
Sbjct: 398 TYRIL 402
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/229 (19%), Positives = 93/229 (40%), Gaps = 1/229 (0%)
Query: 149 MKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVND 208
M++ N+ + ++S++ K PE+ +++EM A+ PD + +N M+ A N+
Sbjct: 1 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60
Query: 209 ISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQ 268
+ A V + M G D ++ L + G +++ + L E+ R + AY
Sbjct: 61 MEKAREVYQHMVESG-YKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYS 119
Query: 269 FLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESG 328
L+ + + ++ + + + + +I L + A + FK+
Sbjct: 120 SLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKH 179
Query: 329 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 377
++ V NV++ G+LE A L + P+ T+ D
Sbjct: 180 GCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLD 228
>gi|11079489|gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thaliana]
Length = 481
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 120/292 (41%), Gaps = 9/292 (3%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
F +M YA+ ++ M+ + P+ +N + AL ++ A+ V E M+
Sbjct: 135 FCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMR 194
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
R D T+S L + + KA +E+ + H D+ Y ++ + + G +
Sbjct: 195 --DRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRV 252
Query: 281 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 340
E I RS+ + Y ++ L A F E E D+ V N +
Sbjct: 253 DEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSL 312
Query: 341 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 400
IGA+ K R++N + + + +G PN+K+ I + + G+ A D K I
Sbjct: 313 IGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCE 372
Query: 401 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLI 452
P ++T ++ F ++K+++ A+ + ++K + F LI
Sbjct: 373 -------PDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLI 417
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 121/272 (44%), Gaps = 5/272 (1%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S N +TYG+L++ C++ KA L ++M E + + + + L+ + +
Sbjct: 190 SPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAES 249
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+ + M+ S ++P+ YTYN M + + A + +EM DG + + TF L
Sbjct: 250 MFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDG-LLPNVVTFGILIDGL 308
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNT 297
+ A + L ++ + ++ Y LI Y + GNLSE + + P+
Sbjct: 309 CKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDV 368
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
+Y +I+ L + + A+ +E + + N +I Y KEG +E A E+
Sbjct: 369 --FTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVC 426
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 389
+ +G +PN T+ D Y + G M+ A+
Sbjct: 427 SQMTEKGIEPNIITFSTLIDGYCKAGKMEAAM 458
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/378 (20%), Positives = 142/378 (37%), Gaps = 51/378 (13%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL+L + M G+ V I +D + K + +A + +D+ N Y L++
Sbjct: 282 ALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLID 341
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
YCK +A +L ++++ + ++ L+ E+ ++QEMK +P
Sbjct: 342 GYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLP 401
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
++ TYN + ++ A V +M G + + TFS L Y +AG E A
Sbjct: 402 NAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKG-IEPNIITFSTLIDGYCKAGKMEAAMGL 460
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANIS-------- 301
E+ + D+ AY LI + + GN E +R+ + ++ A PN +S
Sbjct: 461 YTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCK 520
Query: 302 --------------------------------------YLNMIQVLVNLKDLPGAEKCFK 323
Y +IQ L + A K F
Sbjct: 521 DGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFS 580
Query: 324 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
+ D+ V+I + + L + L+ + G PN+ + + + Y +G
Sbjct: 581 DMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESG 640
Query: 384 DMKLAVDCLEKAIDTGRG 401
+K A+ C E G G
Sbjct: 641 YLKSALRCSEDLSGIGIG 658
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 146/376 (38%), Gaps = 74/376 (19%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +T+G L++ CK A L M + + +N L+ Y K G+ + ++
Sbjct: 297 NVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLH 356
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG------------------ 223
E++ I+PD +TY++ ++ L V+ + A+ +++EMK+ G
Sbjct: 357 SEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKE 416
Query: 224 -------RVAADWT---------TFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAY 267
V + T TFS L Y +AG E A E+ + D+ AY
Sbjct: 417 GNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAY 476
Query: 268 QFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPGAEKCF--- 322
LI + + GN E +R+ + ++ A PN +S L I L + A K F
Sbjct: 477 TALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCL--IDGLCKDGRISDAIKLFLAK 534
Query: 323 ----------KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
E + + + + +I +GR+ A + R G P+ T
Sbjct: 535 TGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTC 594
Query: 373 EI-----FSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVD 427
+ F +LR+ M L D L+ I +P+S R + +E+
Sbjct: 595 IVIIQGHFRAMHLRD-VMMLQADILKMGI----------IPNSSVYRVLAKGYEE----- 638
Query: 428 GAEGFLEILKKAVDDL 443
G+L+ + +DL
Sbjct: 639 --SGYLKSALRCSEDL 652
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 60/310 (19%), Positives = 116/310 (37%), Gaps = 19/310 (6%)
Query: 162 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 221
N ++ K G + + + +M A P+ TY + D A R+ +EM
Sbjct: 162 NMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMI- 220
Query: 222 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 281
+ ++ ++ L +AE + + N +L Y ++ Y + ++
Sbjct: 221 EKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVK 280
Query: 282 EVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
+ +++ + PN L I L ++ A K + S +I V N
Sbjct: 281 KALELYQEMLGDGLLPNVVTFGIL--IDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNC 338
Query: 340 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+I Y K G L A L + P+ T+ I M+ A L++ G
Sbjct: 339 LIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKG 398
Query: 400 RGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVE----VFEPLIRTY 455
++P++ T T + + +E +++ A +E+ + + G+E F LI Y
Sbjct: 399 ------FLPNAVTYNTLIDGYCKEGNMEKA---IEVCSQMTEK-GIEPNIITFSTLIDGY 448
Query: 456 AAAGRTSPVM 465
AG+ M
Sbjct: 449 CKAGKMEAAM 458
>gi|302780277|ref|XP_002971913.1| hypothetical protein SELMODRAFT_412643 [Selaginella moellendorffii]
gi|300160212|gb|EFJ26830.1| hypothetical protein SELMODRAFT_412643 [Selaginella moellendorffii]
Length = 570
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 146/341 (42%), Gaps = 19/341 (5%)
Query: 59 GDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGID-AAENYFVDLP 117
G K LR+ K Y P K++ M + + + A + G D AAEN F +LP
Sbjct: 135 GVLFKLLRNEK-YKPGWKVANYMIRSEKFELGELDYMFQIAFAALAGCDRAAENIFANLP 193
Query: 118 ETSKNH-----LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTG 172
K L GS + +M E L +++K + + N +M +
Sbjct: 194 RVYKRKKALLVLMAGSSPQRENRVVM----EKLFKELKHRSWYTEASGLNQMMLFSLQPD 249
Query: 173 HPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTF 232
++IP + +E K+ + PD +YN+++ + SG E V + ++ D D +T
Sbjct: 250 LRKRIPDLFEEAKSLGVAPDVSSYNLYLGFHCKEKNASGLEEVYQMLQEDPNARPDESTL 309
Query: 233 SNLASIYVEAGLFEKAERALKELE----NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWR 288
LA Y+ G F+KA +AL ELE + R + Y L+ LYG T + V IW
Sbjct: 310 LILACGYISVGCFDKAGKALVELEEGLDSGLFRRKQATYNKLLRLYGDTKDKEGVENIW- 368
Query: 289 SLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEG 348
S+ + P A SY I + + AE+ F + + T + M+ Y G
Sbjct: 369 SILSSRPLKAVDSYSYAIAAFGKAEGVHKAEEIFAKVDGLLETNQV---IAMLSVYTHYG 425
Query: 349 RLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 389
+ A EL ++ R+ ++ YLR G++K A+
Sbjct: 426 YADKARELFQKLPRKRMKHRLVVYKYLIAGYLREGEVKKAL 466
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 87/220 (39%), Gaps = 16/220 (7%)
Query: 77 LSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKE 136
L E + G+ VS ++L K + E + L E +LL C
Sbjct: 257 LFEEAKSLGVAPDVSSYNLYLGFHCKEKNASGLEEVYQMLQEDPNARPDESTLLILACGY 316
Query: 137 L----MTEKAEALLEKMKELNLGF---SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
+ + +AL+E + L+ G +N L+ LY T E + I + + +
Sbjct: 317 ISVGCFDKAGKALVELEEGLDSGLFRRKQATYNKLLRLYGDTKDKEGVENIWSILSSRPL 376
Query: 190 MP-DSYTYNVWMRALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYVEAGLFEK 247
DSY+Y A+AA G + E K DG + + + S+Y G +K
Sbjct: 377 KAVDSYSY-----AIAAFGKAEGVHKAEEIFAKVDGLLETNQVI--AMLSVYTHYGYADK 429
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW 287
A ++L + L Y++LI Y + G + + +++
Sbjct: 430 ARELFQKLPRKRMKHRLVVYKYLIAGYLREGEVKKALQVF 469
>gi|168033824|ref|XP_001769414.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679334|gb|EDQ65783.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 410
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 129/313 (41%), Gaps = 4/313 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A ++ E M K G+ +V L AK + A F + E S N LTY +L+N
Sbjct: 49 AREIFEGMSKAGVAPSVHAYTALLSGYAKQGLLKEAWALFEAMKEKGCSPNVLTYNTLIN 108
Query: 132 -CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
C + L E+MK+ + + + +N ++ + I++EMKA + +
Sbjct: 109 ACTKRAYRLPDLVGLFEEMKQAGVQPNDITYNCMVNACVCLSLFDTASQILKEMKAVNCL 168
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
P+ +Y + +L + A + EEMK GR WT +++L Y G +EKA
Sbjct: 169 PNVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWT-YNSLLKAYAREGRYEKAMC 227
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
+E+ DL Y +I + G+ G +E ++ ++ ++Y M+
Sbjct: 228 LFVGMEDEGCIPDLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYS 287
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
A K + T D+ N+++ A K G A ++ + G PN
Sbjct: 288 KWSRRGRARDLLKTMKRAGCTPDLWTYNILLDAAGKAGSASEAMQIFHELKAAGHSPNLV 347
Query: 371 TWEIFSDYYLRNG 383
++ + Y R G
Sbjct: 348 SFSALINMYGRLG 360
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 104/228 (45%), Gaps = 3/228 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N ++Y +++N + ++A L E+MKEL +S +NSL+ YA+ G EK +
Sbjct: 170 NVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLF 229
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M+ +PD YTYN + + AE V EM+R G D T++ + Y +
Sbjct: 230 VGMEDEGCIPDLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKG-CTPDRVTYNTMLDAYSK 288
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
+A LK ++ DL Y L+ G+ G+ SE +I+ L+ A + +S
Sbjct: 289 WSRRGRARDLLKTMKRAGCTPDLWTYNILLDAAGKAGSASEAMQIFHELKAAGHSPNLVS 348
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWE-SGCATYDIRVTNVMIGAYAKEG 348
+ +I + L AE+ + E +GC +M +Y+ G
Sbjct: 349 FSALINMYGRLGYFEEAERAWVEMRATGCVPNATAYCGLM-NSYSHHG 395
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 81/167 (48%), Gaps = 5/167 (2%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY ++++ + + +AE + +M+ + +N+++ Y+K + +++ M
Sbjct: 243 TYNTVIDMCGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSKWSRRGRARDLLKTM 302
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
K + PD +TYN+ + A S A ++ E+K G + + +FS L ++Y G
Sbjct: 303 KRAGCTPDLWTYNILLDAAGKAGSASEAMQIFHELKAAGH-SPNLVSFSALINMYGRLGY 361
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 291
FE+AERA E+ + +AY L+ Y G +Y++ +R
Sbjct: 362 FEEAERAWVEMRATGCVPNATAYCGLMNSYSHHG----MYKVLCCIR 404
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 97/231 (41%), Gaps = 9/231 (3%)
Query: 212 AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 271
A + E M + G VA ++ L S Y + GL ++A + ++ + ++ Y LI
Sbjct: 49 AREIFEGMSKAG-VAPSVHAYTALLSGYAKQGLLKEAWALFEAMKEKGCSPNVLTYNTLI 107
Query: 272 TLYGQTG-NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCA 330
+ L ++ ++ ++ A +I+Y M+ V L A + KE ++
Sbjct: 108 NACTKRAYRLPDLVGLFEEMKQAGVQPNDITYNCMVNACVCLSLFDTASQILKEMKAVNC 167
Query: 331 TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
++ MI + + GRL+ A EL E + G PN+ T+ Y R G + A+
Sbjct: 168 LPNVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAM- 226
Query: 391 CLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG-FLEILKKAV 440
+ G D G +P T T + + AEG FLE+ +K
Sbjct: 227 ----CLFVGMEDEG-CIPDLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKGC 272
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 77/193 (39%), Gaps = 3/193 (1%)
Query: 56 WEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVD 115
W LK Y A+ L ME G + +D+ + AE F++
Sbjct: 207 WTYNSLLKAYAREGRYEKAMCLFVGMEDEGCIPDLYTYNTVIDMCGRGGLFAEAEGVFLE 266
Query: 116 LPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGH 173
+ + + +TY ++L+ Y K +A LL+ MK +N L+ K G
Sbjct: 267 MQRKGCTPDRVTYNTMLDAYSKWSRRGRARDLLKTMKRAGCTPDLWTYNILLDAAGKAGS 326
Query: 174 PEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFS 233
+ I E+KA+ P+ +++ + + AER EM+ G V + T +
Sbjct: 327 ASEAMQIFHELKAAGHSPNLVSFSALINMYGRLGYFEEAERAWVEMRATGCV-PNATAYC 385
Query: 234 NLASIYVEAGLFE 246
L + Y G+++
Sbjct: 386 GLMNSYSHHGMYK 398
>gi|357521009|ref|XP_003630793.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524815|gb|AET05269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 584
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 126/265 (47%), Gaps = 4/265 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ + + +++N + +A + KMKE ++ FN+L+ + G P + ++
Sbjct: 112 DSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAMKLL 171
Query: 182 QEM-KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
+ M + ++ P+ TYN+ ++A N++ A V+ +M G + D T++ LA +
Sbjct: 172 EMMIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSG-MQPDIVTYNTLARAFA 230
Query: 241 EAGLFEKAERALKELE--NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
+ G + AER + +++ N + +I Y + GN++E R ++ +
Sbjct: 231 QNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELGVHPN 290
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+ + ++I+ +++ D G E+ E D+ + ++ A++ G ++N EE+ +
Sbjct: 291 PVVFNSLIKGYLDITDTDGVEEALTLMEEFGIKPDVVTYSTIMNAWSSSGLMDNCEEIFD 350
Query: 359 RARRRGADPNAKTWEIFSDYYLRNG 383
+ +P+ + + I + Y+R G
Sbjct: 351 DMVKAEIEPDIQAYSILAKGYVRAG 375
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/337 (20%), Positives = 128/337 (37%), Gaps = 39/337 (11%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +L+ + +LL K++E + S+ FN+++ ++ +G + I ++
Sbjct: 79 ITYTTLVAALTRLKRFNSIPSLLSKVEENGVKPDSILFNAMINAFSDSGKVHEAMKIFRK 138
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
MK P + T+N ++ V A +++E M +DG V + T++ L +
Sbjct: 139 MKECGCKPTTSTFNTLIKGFGIVGRPHEAMKLLEMMIQDGNVKPNERTYNILIQAWCTKN 198
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
E+A + ++ N D+ Y L + Q G R+ ++ Y
Sbjct: 199 ELEEAWNVMHKMVNSGMQPDIVTYNTLARAFAQNGETDNAERLILKMQ---------QYN 249
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
N ++ P C ++I Y KEG + A + +
Sbjct: 250 NKVK--------PNERTC----------------GIIIRGYCKEGNMTEALRFLYKMKEL 285
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQE 423
G PN + YL D D +E+A+ G K P T T M +
Sbjct: 286 GVHPNPVVFNSLIKGYLDITD----TDGVEEALTLMEEFGIK--PDVVTYSTIMNAWSSS 339
Query: 424 KDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 460
+D E + + KA + ++ + L + Y AG+
Sbjct: 340 GLMDNCEEIFDDMVKAEIEPDIQAYSILAKGYVRAGQ 376
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 1/169 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N T G ++ YCKE +A L KMKEL + + + FNSL+ Y + + +
Sbjct: 255 NERTCGIIIRGYCKEGNMTEALRFLYKMKELGVHPNPVVFNSLIKGYLDITDTDGVEEAL 314
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M+ I PD TY+ M A ++ + E + ++M + + D +S LA YV
Sbjct: 315 TLMEEFGIKPDVVTYSTIMNAWSSSGLMDNCEEIFDDMVK-AEIEPDIQAYSILAKGYVR 373
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
AG +KAE L + ++ + +I+ + G + R++ +
Sbjct: 374 AGQPDKAEALLNSMTKYGLQANVVIFTTIISGWCAAGKMDCALRLYEKM 422
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 121/303 (39%), Gaps = 18/303 (5%)
Query: 164 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
LM+ + G P + I + P TY + AL + + ++ +++ +G
Sbjct: 49 LMSTLIRKGKPHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSIPSLLSKVEENG 108
Query: 224 RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 283
V D F+ + + + ++G +A + ++++ S + LI +G G E
Sbjct: 109 -VKPDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEA 167
Query: 284 YRIWRSLRL---AFPN--TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 338
++ + PN T NI +IQ +L A + + DI N
Sbjct: 168 MKLLEMMIQDGNVKPNERTYNI----LIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYN 223
Query: 339 VMIGAYAKEGRLENAEE--LKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 396
+ A+A+ G +NAE LK + PN +T I Y + G+M A+ L K
Sbjct: 224 TLARAFAQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMK 283
Query: 397 DTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYA 456
+ G P+ + ++ + D DG E L ++++ V + ++ ++
Sbjct: 284 ELGVH------PNPVVFNSLIKGYLDITDTDGVEEALTLMEEFGIKPDVVTYSTIMNAWS 337
Query: 457 AAG 459
++G
Sbjct: 338 SSG 340
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/256 (19%), Positives = 104/256 (40%), Gaps = 3/256 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N TY L+ +C + E+A ++ KM + + +N+L +A+ G + +I
Sbjct: 183 NERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAFAQNGETDNAERLI 242
Query: 182 QEMKA--SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+M+ + + P+ T + +R +++ A R + +MK G V + F++L Y
Sbjct: 243 LKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELG-VHPNPVVFNSLIKGY 301
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
++ + E AL +E D+ Y ++ + +G + I+ + A
Sbjct: 302 LDITDTDGVEEALTLMEEFGIKPDVVTYSTIMNAWSSSGLMDNCEEIFDDMVKAEIEPDI 361
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+Y + + V AE ++ + +I + G+++ A L E+
Sbjct: 362 QAYSILAKGYVRAGQPDKAEALLNSMTKYGLQANVVIFTTIISGWCAAGKMDCALRLYEK 421
Query: 360 ARRRGADPNAKTWEIF 375
G N KT+E
Sbjct: 422 MNEMGTPLNLKTYETL 437
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/370 (21%), Positives = 154/370 (41%), Gaps = 13/370 (3%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL L ME+R + V + +D + + IDAA + F ++ + +TY SL+
Sbjct: 212 ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 271
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK LL+ M + + + FN L+ ++ K G ++ + +EM I P
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ TYN M N +S A +++ M R+ + + D TF++L Y + +
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNMLDLMVRN-KCSPDIVTFTSLIKGYCMVKRVDDGMKV 390
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVL 309
+ + R + Y L+ + Q+G + +++ + P+ ++Y ++ L
Sbjct: 391 FRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDV--MTYGILLDGL 448
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
+ L A + F++ + I + +I K G++E+A L +G PN
Sbjct: 449 CDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNV 508
Query: 370 KTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 429
T+ + + G + A L K + G P+ T T +R ++ D+ +
Sbjct: 509 MTYTVMISGLCKKGSLSEANILLRKMEEDGNA------PNDCTYNTLIRAHLRDGDLTAS 562
Query: 430 EGFLEILKKA 439
+E +K
Sbjct: 563 AKLIEEMKSC 572
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 137/338 (40%), Gaps = 42/338 (12%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY S++N C+ T A LL KM+E N+ +++++ + G + ++ +E
Sbjct: 194 VTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKE 253
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ I TYN +R L + ++++M + + TF+ L ++V+ G
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR-EIVPNVITFNVLLDVFVKEG 312
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
++A KE+ R ++ Y L+ Y LSE AN
Sbjct: 313 KLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE---------------AN---- 353
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
NM+ ++V K P DI +I Y R+++ ++ +R
Sbjct: 354 NMLDLMVRNKCSP----------------DIVTFTSLIKGYCMVKRVDDGMKVFRNISKR 397
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQE 423
G NA T+ I + ++G +KLA + ++ + G +P T +
Sbjct: 398 GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG------VLPDVMTYGILLDGLCDN 451
Query: 424 KDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 461
++ A E L+K+ DLG+ ++ +I G+
Sbjct: 452 GKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKV 489
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 82/196 (41%), Gaps = 38/196 (19%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
+K+ N+ KRG+ +I + + I AE F ++ + +TYG LL+
Sbjct: 387 GMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLD 446
Query: 132 CYCKELMTEKAEALLEKMKE--LNLG-----------------------FSSMP------ 160
C EKA + E +++ ++LG F S+P
Sbjct: 447 GLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKP 506
Query: 161 ----FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
+ +++ K G + ++++M+ P+ TYN +RA D++ + ++I
Sbjct: 507 NVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLI 566
Query: 217 EEMKRDGRVAADWTTF 232
EEMK G +AD ++
Sbjct: 567 EEMKSCG-FSADASSI 581
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 2/149 (1%)
Query: 59 GDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP- 117
G L L D AL++ E+++K M+ + ++ + K ++ A N F LP
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 501
Query: 118 -ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK 176
N +TY +++ CK+ +A LL KM+E + +N+L+ + + G
Sbjct: 502 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTA 561
Query: 177 IPAIIQEMKASSIMPDSYTYNVWMRALAA 205
+I+EMK+ D+ + + + L +
Sbjct: 562 SAKLIEEMKSCGFSADASSIKMVIDMLLS 590
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/390 (20%), Positives = 151/390 (38%), Gaps = 46/390 (11%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY ++N CK +KAEA+L +M + + + +NSL+ Y+ TG ++ + ++M
Sbjct: 253 TYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKM 312
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGR-------------------- 224
+ I+PD T N M +L I A V + M G+
Sbjct: 313 TSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCL 372
Query: 225 --------------VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 270
+A D F+ L Y + G+ ++A E+ + D+ Y +
Sbjct: 373 VDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTV 432
Query: 271 ITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESG 328
I + G + + + + + P+ + +L IQ DL A+ + +
Sbjct: 433 IAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFL--IQGFCTHGDLLKAKDLVLQMMNK 490
Query: 329 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 388
DI N +I K GR+ +A+ + + G PN + D Y G M+ A
Sbjct: 491 GMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENA 550
Query: 389 VDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVD-GAEGFLEILKKAVDDLGVEV 447
+ + + G P+ T + + + +D G F EIL K + +
Sbjct: 551 LRVFDVMVSAG------IQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKP-STTL 603
Query: 448 FEPLIRTYAAAGRTSPVMLRRLKMEKVEVS 477
+ ++ AGRT P ++ +M + ++
Sbjct: 604 YNIILHGLFQAGRTVPAKVKFHEMTESGIA 633
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 141/355 (39%), Gaps = 50/355 (14%)
Query: 109 AENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLY 168
AE V LP N + Y ++++ + KE KA L +M + + +N ++
Sbjct: 206 AEGGAVCLP----NAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNAL 261
Query: 169 AKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAAD 228
K +K AI+++M ++PD++TYN + ++ A RV ++M G + D
Sbjct: 262 CKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQG-ILPD 320
Query: 229 WTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWR 288
T ++L + + G + A + + D+ +Y+ ++ Y G
Sbjct: 321 VVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKG---------- 370
Query: 289 SLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEG 348
LV+L +L F S D + NV+I AYAK G
Sbjct: 371 -------------------CLVDLTEL------FNLMLSDGIAPDSHIFNVLIKAYAKCG 405
Query: 349 RLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVP 408
L+ A + R +G +P+ T+ R G M AV+ + ID G P
Sbjct: 406 MLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQG------VAP 459
Query: 409 SSETIRTFMRHFEQEKDVDGAEGF-LEILKKAV-DDLGVEVFEPLIRTYAAAGRT 461
S T ++ F D+ A+ L+++ K + D+G F +I GR
Sbjct: 460 SISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIG--CFNFIINNLCKLGRV 512
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 59/310 (19%), Positives = 116/310 (37%), Gaps = 6/310 (1%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY L+ +C KA+ L+ +M + FN ++ K G I
Sbjct: 463 TYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFT 522
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ + P+ YN M V + A RV + M G + + + L + Y + G
Sbjct: 523 ISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAG-IQPNVVVYGTLVNGYCKVGR 581
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
++ +E+ ++ + Y ++ Q G + + + +Y
Sbjct: 582 IDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSI 641
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
++ L A FKE + DI N+MI + R+E A++L R G
Sbjct: 642 VLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSG 701
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 424
P+ T+ I ++ G ++ A D + + G P+S+ + +R +++
Sbjct: 702 LVPSVVTYSIMMTNLIKEGLVEEADDMF-----SSMENAGCEQPNSQLLNHVVRELLEKR 756
Query: 425 DVDGAEGFLE 434
++ A +L
Sbjct: 757 EIVRAGTYLS 766
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 119/299 (39%), Gaps = 51/299 (17%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNH---LTYGSLLNCYCKEL 137
M +GM + ++ + K+ + A+N F D + H + Y +L++ YC
Sbjct: 487 MMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIF-DFTISIGLHPNVMVYNTLMDGYCLVG 545
Query: 138 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 197
E A + + M + + + + +L+ Y K G ++ ++ +E+ I P + YN
Sbjct: 546 KMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYN 605
Query: 198 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF-----EKAERAL 252
+ + L A+ EM G +A D T+S V GLF ++A
Sbjct: 606 IILHGLFQAGRTVPAKVKFHEMTESG-IAMDRYTYS-----IVLGGLFKNSCSDEAILLF 659
Query: 253 KELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNL 312
KEL N D++ +I Q + E ++ A+IS ++ +V
Sbjct: 660 KELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLF----------ASISRSGLVPSVV-- 707
Query: 313 KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD-PNAK 370
TY I +TN++ KEG +E A+++ G + PN++
Sbjct: 708 ------------------TYSIMMTNLI-----KEGLVEEADDMFSSMENAGCEQPNSQ 743
>gi|125592120|gb|EAZ32470.1| hypothetical protein OsJ_16686 [Oryza sativa Japonica Group]
Length = 879
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/405 (19%), Positives = 162/405 (40%), Gaps = 46/405 (11%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL E M+ G+ T+ +I + AK+ +A+N F + +S N + Y ++++
Sbjct: 296 ALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIH 355
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C+ E+AE L+ +M+E + ++S+M Y + K + + +K P
Sbjct: 356 AHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKP 415
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+Y + + ++ A + +EM+ G + + T+S L + ++ F A
Sbjct: 416 SIISYGCLLNLYVKIGKVAKALSISKEMESCG-IKHNNKTYSMLINGFIHLHDFANAFAI 474
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
+E+ D + Y LI + + GN+ I ++ +N ++ +I+
Sbjct: 475 FEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIE---- 530
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
YA G +++A + + RR G P T
Sbjct: 531 -------------------------------GYAVAGDMKSALDTLDLMRRSGCVPTVMT 559
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG 431
+ +R ++ AV L+K G P+ T MR + D+ A
Sbjct: 560 YNALIHGLVRKHKVQRAVSVLDKMSIAG------ITPNEHTYTIIMRGYAASGDIGKAFE 613
Query: 432 FLEILKKAVDDLGVEVFEPLIRTYAAAGR--TSPVMLRRLKMEKV 474
+ +K++ L V ++E L+R +GR ++ + R + +K+
Sbjct: 614 YFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKI 658
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/387 (20%), Positives = 159/387 (41%), Gaps = 44/387 (11%)
Query: 108 AAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTL 167
A + F +P+ S+ +G ++ Y K A A E M+ + ++ F SL+
Sbjct: 229 AVVSAFERIPKPSRRE--FGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHA 286
Query: 168 YAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAA 227
YA + ++EMK+ + TY++ + A +ND A+ + +E K +
Sbjct: 287 YAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTK-LSSL 345
Query: 228 DWTTFSNLASIYVEAGLFEKAERALKELEN--------------------RNAHRDLS-- 265
+ +SN+ + ++G E+AE ++E+E +N ++ L
Sbjct: 346 NGIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVF 405
Query: 266 -------------AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNL 312
+Y L+ LY + G +++ I + + N +Y +I ++L
Sbjct: 406 ERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHL 465
Query: 313 KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
D A F+E D + N++I A+ K G ++ A + E+ ++ P+ + +
Sbjct: 466 HDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAF 525
Query: 373 EIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGF 432
+ Y GDMK A+D L+ +G VP+ T + ++ V A
Sbjct: 526 RPIIEGYAVAGDMKSALDTLDLMRRSG------CVPTVMTYNALIHGLVRKHKVQRAVSV 579
Query: 433 LEILKKAVDDLGVEVFEPLIRTYAAAG 459
L+ + A + ++R YAA+G
Sbjct: 580 LDKMSIAGITPNEHTYTIIMRGYAASG 606
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 138/337 (40%), Gaps = 56/337 (16%)
Query: 74 ALKLSENMEKRGM---NKTVS---DQAIHLDLVAKVQGIDAAENYFVDLPETSKNHL--- 124
AL +S+ ME G+ NKT S + IHL A N F E ++ L
Sbjct: 436 ALSISKEMESCGIKHNNKTYSMLINGFIHLHDFA---------NAFAIFEEMLRSGLQPD 486
Query: 125 --TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQ 182
Y L+ +CK ++A +LEKM++ + S+ F ++ YA G + +
Sbjct: 487 RAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLD 546
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
M+ S +P TYN + L + + A V+++M G + + T++ + Y +
Sbjct: 547 LMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAG-ITPNEHTYTIIMRGYAAS 605
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY 302
G KA +++ D+ Y+ L+ ++G + + R +
Sbjct: 606 GDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREM------------ 653
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+ + +P + + N++I +A+ G + AE+L ++ +
Sbjct: 654 --------SFQKIP---------------RNTFIYNILIDGWARRGDVWEAEDLMKQMKE 690
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
G PN T+ + + + GDM+ A +E+ +D G
Sbjct: 691 DGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVG 727
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 88/192 (45%), Gaps = 1/192 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
+ N TY ++ Y KA K+KE L + +L+ K+G + A
Sbjct: 589 TPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALA 648
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+ +EM I +++ YN+ + A D+ AE ++++MK DG V + T+++ +
Sbjct: 649 VTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDG-VPPNIHTYTSYINAC 707
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
+AG ++AE+ ++E+ + ++ Y LI + + + + ++LA
Sbjct: 708 CKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDE 767
Query: 300 ISYLNMIQVLVN 311
SY ++ L++
Sbjct: 768 ASYHCLVTSLLS 779
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 91/201 (45%), Gaps = 3/201 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK--NHLTYGSLLN 131
A+ + + M G+ I + A I A YF + E+ + Y +LL
Sbjct: 576 AVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLR 635
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK + A A+ +M + ++ +N L+ +A+ G + ++++MK + P
Sbjct: 636 ACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPP 695
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ +TY ++ A D+ AE+VIEEM G + + T++ L + L ++A +
Sbjct: 696 NIHTYTSYINACCKAGDMQRAEKVIEEMVDVG-LKPNVKTYTTLIKGWARVSLPDRALKC 754
Query: 252 LKELENRNAHRDLSAYQFLIT 272
+E++ D ++Y L+T
Sbjct: 755 FEEMKLAGLKPDEASYHCLVT 775
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 76/170 (44%), Gaps = 13/170 (7%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL ++ M + + + I +D A+ + AE+ + E N TY S +N
Sbjct: 646 ALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYIN 705
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK ++AE ++E+M ++ L + + +L+ +A+ P++ +EMK + + P
Sbjct: 706 ACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKP 765
Query: 192 DSYTYNVWMRALAAVNDI------SGAERVIEEMKR-----DGRVAADWT 230
D +Y+ + +L + + +G V EM D R A W+
Sbjct: 766 DEASYHCLVTSLLSRATVMEGSTYTGIISVCREMSENDLTVDLRTAVHWS 815
>gi|255660838|gb|ACU25588.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 418
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 123/267 (46%), Gaps = 9/267 (3%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
+ L++ +CKE A+++ +++ + L S + FN+LM Y + G ++ + M
Sbjct: 139 FNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMH 198
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
S I PD YTY+V + L + ++ A + +EM +G V + TF+ L + + G
Sbjct: 199 GSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLV-PNGVTFTTLIDGHCKTGSI 257
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
+ A A KE+ + DL Y LI + G+L + + + + I+Y +
Sbjct: 258 DLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTL 317
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV----MIGAYAKEGRLENAEELKERAR 361
I DL E FK ++ +IR+ +V +I +EG+ AE++
Sbjct: 318 IDGSCKEGDL---ETAFK-YKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLREML 373
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLA 388
G P+ T+ + + + + GD+K+
Sbjct: 374 SVGLKPDNGTYTMIINEFCKKGDVKMG 400
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 82/202 (40%), Gaps = 1/202 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY L+N CKE A L ++M L + + F +L+ + KTG + +EM
Sbjct: 208 TYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMEAYKEM 267
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
PD TYN + L D+ A+ +I+EM G + D T++ L + G
Sbjct: 268 LRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKG-LKPDKITYTTLIDGSCKEGD 326
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
E A + K + N D AY LI+ + G ++ R + N +Y
Sbjct: 327 LETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLREMLSVGLKPDNGTYTM 386
Query: 305 MIQVLVNLKDLPGAEKCFKEWE 326
+I D+ K KE +
Sbjct: 387 IINEFCKKGDVKMGSKLLKEMQ 408
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 53/104 (50%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +L++ CKE E A ++M + N+ + + +L++ + G +++E
Sbjct: 312 ITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLRE 371
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAA 227
M + + PD+ TY + + D+ ++++EM+RDG V
Sbjct: 372 MLSVGLKPDNGTYTMIINEFCKKGDVKMGSKLLKEMQRDGHVPC 415
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 114/275 (41%), Gaps = 30/275 (10%)
Query: 13 IAKRSKKHLEEALYDRLFKKG--SSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKL 70
K + L ++++D + K G S VS +N +++ +GD + R
Sbjct: 146 FCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIR---------LGDLDEGFR---- 192
Query: 71 YYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGS 128
L M G+ V ++ ++ + K ++ A F ++ N +T+ +
Sbjct: 193 ------LKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTT 246
Query: 129 LLNCYCKELMTEKAEALLEKMKE-LNLGFSS--MPFNSLMTLYAKTGHPEKIPAIIQEMK 185
L++ +CK T + +E KE L GFS + +N+L+ K G ++ +I EM
Sbjct: 247 LIDGHCK---TGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMS 303
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
+ PD TY + D+ A + + M ++ + D ++ L S G
Sbjct: 304 MKGLKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKE-NIRLDDVAYTALISGLCREGQS 362
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
AE+ L+E+ + D Y +I + + G++
Sbjct: 363 VGAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDV 397
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 2/142 (1%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + +TY +L+ CKE ++A+ L+++M L + + +L+ K G E
Sbjct: 273 SPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFK 332
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+ M +I D Y + L GAE+++ EM G + D T++ + + +
Sbjct: 333 YKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLREMLSVG-LKPDNGTYTMIINEF 391
Query: 240 VEAGLFEKAERALKELENRNAH 261
+ G + + LKE++ R+ H
Sbjct: 392 CKKGDVKMGSKLLKEMQ-RDGH 412
>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 874
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 128/301 (42%), Gaps = 5/301 (1%)
Query: 106 IDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNS 163
+DAA F ++PE N T+G L+ YCK +T+K LL M+ + + + +N+
Sbjct: 163 VDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNT 222
Query: 164 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRD- 222
+++ + + G + ++++M+ ++PD T+N + AL + A R+ +M+ D
Sbjct: 223 IVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDE 282
Query: 223 --GRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
G + T++ + + + GL E A+ + + + L +Y + + G
Sbjct: 283 YLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKF 342
Query: 281 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 340
E + + + + SY ++ L L L A+ + + D +
Sbjct: 343 IEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCL 402
Query: 341 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 400
+ Y G+++ A+ L + R PNA T I G + A + L K + G
Sbjct: 403 LHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGY 462
Query: 401 G 401
G
Sbjct: 463 G 463
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 117/285 (41%), Gaps = 11/285 (3%)
Query: 117 PETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK 176
PET T+ L+ C + A L ++M E + F L+ Y K G +K
Sbjct: 145 PET----YTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDK 200
Query: 177 IPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLA 236
++ M++ ++P+ YN + + +E+++E+M+ +G V D TF++
Sbjct: 201 GLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLV-PDIVTFNSRI 259
Query: 237 SIYVEAGLFEKAERALKELENRNAHRDLS-----AYQFLITLYGQTGNLSEVYRIWRSLR 291
S + G A R ++E + + L Y ++ + + G L + ++ S+R
Sbjct: 260 SALCKEGKVLDASRIFSDME-LDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIR 318
Query: 292 LAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLE 351
+ SY +Q LV AE K+ I N+++ K G L
Sbjct: 319 ENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLS 378
Query: 352 NAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 396
+A+ + +R G P+A T+ Y G + A L++ +
Sbjct: 379 DAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMM 423
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/349 (19%), Positives = 141/349 (40%), Gaps = 27/349 (7%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE---TSKNHLTYGSLLNCYCKEL 137
M +G+ ++ I +D + K+ G+ + V L + S + +TYG LL+ YC
Sbjct: 352 MIDKGIGPSIYSYNILMDGLCKL-GMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVG 410
Query: 138 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 197
+ A++LL++M N ++ N L+ G + ++++M D+ T N
Sbjct: 411 KVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCN 470
Query: 198 VWMRALAAVNDISGAERVIEEMKRDGRVA----------------------ADWTTFSNL 235
+ + L ++ A +++ M+ G A D T+S L
Sbjct: 471 IIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTL 530
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
+ +AG F +A+ E+ D AY I + + G +S +R+ + +
Sbjct: 531 LNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGC 590
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEE 355
+ + +Y ++I L + E + +I N I + G++E+A
Sbjct: 591 HKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATN 650
Query: 356 LKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID-TGRGDG 403
L + ++ PN +++ + + D +A + E A+ G+ +G
Sbjct: 651 LLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVSICGQKEG 699
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/305 (20%), Positives = 128/305 (41%), Gaps = 11/305 (3%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
+N L+ + E + + ++M I P++YT+N+ +RAL + + A + +EM
Sbjct: 115 YNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARELFDEMP 174
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
G ++ TF L Y +AGL +K L +E+ + Y +++ + + G
Sbjct: 175 EKGCKPNEF-TFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRN 233
Query: 281 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE----SGCATYDIRV 336
+ ++ +R +++ + I L + A + F + E G +
Sbjct: 234 DDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSIT 293
Query: 337 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 396
N+M+ + K G LE+A+ L E R + +++ I+ +R+G A L++ I
Sbjct: 294 YNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMI 353
Query: 397 DTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYA 456
D G G PS + M + + A+ + ++K+ + L+ Y
Sbjct: 354 DKGIG------PSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYC 407
Query: 457 AAGRT 461
+ G+
Sbjct: 408 SVGKV 412
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/317 (17%), Positives = 121/317 (38%), Gaps = 13/317 (4%)
Query: 75 LKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF----VDLPETSKNHLTYGSLL 130
L LS +++K ++ +S +I AK ID A F PE Y LL
Sbjct: 64 LILSSSIQKTKLSSLLSVVSI----FAKSNHIDKAFPQFQFVRSRFPENKPGIYLYNVLL 119
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
+E E L + M + + FN L+ + + + EM
Sbjct: 120 ESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARELFDEMPEKGCK 179
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
P+ +T+ + +R ++ M+ G V + ++ + S + G + +E+
Sbjct: 180 PNEFTFGILVRGYCKAGLTDKGLELLNSMESFG-VLPNKVVYNTIVSSFCREGRNDDSEK 238
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR----LAFPNTANISYLNMI 306
++++ D+ + I+ + G + + RI+ + L P +I+Y M+
Sbjct: 239 LVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLML 298
Query: 307 QVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD 366
+ + L A+ F+ ++ N+ + + G+ AE + ++ +G
Sbjct: 299 KGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIG 358
Query: 367 PNAKTWEIFSDYYLRNG 383
P+ ++ I D + G
Sbjct: 359 PSIYSYNILMDGLCKLG 375
>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
Length = 661
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 140/332 (42%), Gaps = 15/332 (4%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+T+ +L+N C E +A AL+ KM L + + +++ K G + ++ +
Sbjct: 222 ITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSK 281
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ + I PD Y+ + L S A+ + EM G +A + T++ + + G
Sbjct: 282 MEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG-IAPNVFTYNCMIDGFCSFG 340
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANIS 301
+ A+R L+++ R + D+ + LI+ + G L E ++ + R FP+T ++
Sbjct: 341 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT--VT 398
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +MI A+ F A+ D+ N +I Y + R++ +L
Sbjct: 399 YNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 454
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
RRG N T+ + ++ A D ++ I G P + T + F
Sbjct: 455 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG------VCPDTITCNILLYGFC 508
Query: 422 QEKDVDGAEGFLEILKKAVDDLGVEVFEPLIR 453
+ + ++ A E+++ + DL + +I
Sbjct: 509 ENEKLEEALELFEVIQMSKIDLDTVAYNIIIH 540
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/358 (20%), Positives = 142/358 (39%), Gaps = 17/358 (4%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL L ME+ + V + +D + K A+ F ++ E + N TY +++
Sbjct: 275 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 334
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C A+ LL M E + + FN+L++ K G + + EM I P
Sbjct: 335 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 394
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D+ TYN + N A+ + + M + D TF+ + +Y A ++ +
Sbjct: 395 DTVTYNSMIYGFCKHNRFDDAKHMFDLM-----ASPDVVTFNTIIDVYCRAKRVDEGMQL 449
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVL 309
L+E+ R + + Y LI + + NL+ +++ + P+T + L +
Sbjct: 450 LREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL--LYGF 507
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
+ L A + F+ + D N++I K +++ A +L G +P+
Sbjct: 508 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 567
Query: 370 KTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVD 427
+T+ + + + A K D G P + T T +R + ++D
Sbjct: 568 QTYNVMISGFCGKSAISDANVLFHKMKDNGHE------PDNSTYNTLIRGCLKAGEID 619
>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Cucumis sativus]
Length = 962
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 140/329 (42%), Gaps = 5/329 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL M++ G+ ++ +I + AK ++A+++F + E +S N + YG+++
Sbjct: 365 ALSCVRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIY 424
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
YC+ +KAEAL+ +M+E + ++++M Y G +K + + K + P
Sbjct: 425 AYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNP 484
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
TY + A + +S A V +EM+ G + + T+S L + +++ + A
Sbjct: 485 SVITYGCLINLYAKLGKVSKALEVSKEMEHAG-IKHNMKTYSMLINGFLKLKDWANAFAI 543
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
++L D+ Y +IT + G + + ++ +++ +I
Sbjct: 544 FEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFAR 603
Query: 312 LKDLPGAEKCFKEWE-SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
++ A F SGC + N +I ++ ++E AE++ + G PN
Sbjct: 604 KGEMKKALDVFDMMRMSGCIP-TVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEH 662
Query: 371 TWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
T+ Y GD A K D G
Sbjct: 663 TYTTIMHGYASLGDTGKAFTYFTKLRDEG 691
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 158/367 (43%), Gaps = 10/367 (2%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
Y +L++ Y E+A + + KMKE + S + ++ L++ +AKTG+ E QE
Sbjct: 348 VYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEA 407
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
K ++ Y + A ++ AE ++ EM+ +G + A + + Y G
Sbjct: 408 KEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEG-IDAPIDIYHTMMDGYTMVGD 466
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+K + + + + Y LI LY + G +S+ + + + A +Y
Sbjct: 467 EDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSM 526
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+I + LKD A F++ D+ + N +I A+ G+++ A + +++
Sbjct: 527 LINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQR 586
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 424
P +T+ + R G+MK A+D D R G +P+ T + +++
Sbjct: 587 HKPTTRTFMPIIHGFARKGEMKKALD----VFDMMRMSG--CIPTVHTYNALILGLVEKR 640
Query: 425 DVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVM--LRRLKMEKVEVSEAS-K 481
++ AE L+ + A + ++ YA+ G T +L+ E +++ + +
Sbjct: 641 KMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYE 700
Query: 482 KLLEAIC 488
LL+A C
Sbjct: 701 ALLKACC 707
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/328 (20%), Positives = 137/328 (41%), Gaps = 3/328 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNH--LTYGSLLN 131
L + E ++ G+N +V ++L AK+ + A ++ H TY L+N
Sbjct: 470 CLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLIN 529
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ K A A+ E + + + + +N+++T + G ++ ++EM+ P
Sbjct: 530 GFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKP 589
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ T+ + A ++ A V + M+ G + T++ L VE EKAE+
Sbjct: 590 TTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPT-VHTYNALILGLVEKRKMEKAEQI 648
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
L E+ + Y ++ Y G+ + + + LR +Y +++
Sbjct: 649 LDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCK 708
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+ A KE + + + N++I +A+ G + A +L ++ +R G P+ T
Sbjct: 709 SGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQMKREGVQPDIHT 768
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ F + + GDM+ A +E+ G
Sbjct: 769 YTSFINACSKAGDMQRATKTIEEMKSVG 796
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/323 (19%), Positives = 137/323 (42%), Gaps = 3/323 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
AL++S+ ME G+ + ++ ++ K++ A F DL + + + Y +++
Sbjct: 505 ALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIIT 564
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C ++A +++M++ ++ F ++ +A+ G +K + M+ S +P
Sbjct: 565 AFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIP 624
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+TYN + L + AE++++EM G V+ + T++ + Y G KA
Sbjct: 625 TVHTYNALILGLVEKRKMEKAEQILDEMTLAG-VSPNEHTYTTIMHGYASLGDTGKAFTY 683
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
+L + D+ Y+ L+ ++G + + + + Y +I
Sbjct: 684 FTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWAR 743
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
D+ A ++ + DI I A +K G ++ A + E + G PN KT
Sbjct: 744 RGDIWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKT 803
Query: 372 WEIFSDYYLRNGDMKLAVDCLEK 394
+ + + R + A+ C E+
Sbjct: 804 YTTLINGWARASLPEKALSCFEE 826
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 1/148 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY +LL CK + A A+ ++M N+ ++ +N L+ +A+ G + ++Q+M
Sbjct: 698 TYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQM 757
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
K + PD +TY ++ A + D+ A + IEEMK G V + T++ L + + A L
Sbjct: 758 KREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVG-VKPNVKTYTTLINGWARASL 816
Query: 245 FEKAERALKELENRNAHRDLSAYQFLIT 272
EKA +E++ D + Y L+T
Sbjct: 817 PEKALSCFEEMKLSGLKPDRAVYHCLMT 844
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 117/299 (39%), Gaps = 7/299 (2%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
+ ++ Y + G + ++M+A I P S+ Y + A A D+ A + +MK
Sbjct: 314 YGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMK 373
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
+G + T+S L S + + G E A+ +E + +++ + Y +I Y Q N+
Sbjct: 374 EEG-IEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNM 432
Query: 281 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 340
+ + R + + Y M+ + D F+ ++ + +
Sbjct: 433 DKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCL 492
Query: 341 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 400
I YAK G++ A E+ + G N KT+ + + +L+ D A E I
Sbjct: 493 INLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIK--- 549
Query: 401 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
DG K P + F +D A ++ ++K F P+I +A G
Sbjct: 550 -DGIK--PDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKG 605
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 54/297 (18%), Positives = 109/297 (36%), Gaps = 7/297 (2%)
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
P Y + + D+ A E+M+ G + ++NL Y E+A
Sbjct: 309 PSRKEYGLMVNYYTRRGDMHRARETFEKMRARG-IEPSSHVYTNLIHAYAVGRDMEEALS 367
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
+++++ L Y L++ + +TGN ++ + + I Y N+I
Sbjct: 368 CVRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYC 427
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
++ AE +E E I + + M+ Y G + + ER + G +P+
Sbjct: 428 QRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVI 487
Query: 371 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 430
T+ + Y + G + A++ ++ G K T + F + KD A
Sbjct: 488 TYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMK------TYSMLINGFLKLKDWANAF 541
Query: 431 GFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAI 487
E L K V ++ +I + G+ + +M+K ++ + I
Sbjct: 542 AIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPII 598
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY S +N K ++A +E+MK + + + + +L+ +A+ PEK + +EM
Sbjct: 768 TYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEM 827
Query: 185 KASSIMPDSYTYNVWMRAL 203
K S + PD Y+ M +L
Sbjct: 828 KLSGLKPDRAVYHCLMTSL 846
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 118/311 (37%), Gaps = 36/311 (11%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY S++ CK +KA +L M + + M +NS++ Y +G P++ +++
Sbjct: 232 VTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKK 291
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M++ + PD TY++ M L A ++ + M + G + + TT+ L Y G
Sbjct: 292 MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRG-LKPEITTYGTLLQGYATKG 350
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF--PNT---- 297
+ L + H D + LI Y G + + ++ +R PN
Sbjct: 351 ALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYG 410
Query: 298 -----------------------------ANISYLNMIQVLVNLKDLPGAEKCFKEWESG 328
NI Y ++I L AE+ E
Sbjct: 411 AVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR 470
Query: 329 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 388
+ N +I ++ KEGR+ +E+L E R G PN T+ + Y G M A
Sbjct: 471 GICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEA 530
Query: 389 VDCLEKAIDTG 399
+ L + G
Sbjct: 531 MKLLSGMVSVG 541
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 126/286 (44%), Gaps = 6/286 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMP----FNSLMTLYAKTGHPEKI 177
N +Y LL C E +++A LL M + + G S P + +++ + K G +K
Sbjct: 157 NVFSYNILLKGLCDENRSQEALELLHMMAD-DRGGGSPPDVVSYTTVINGFFKEGDSDKA 215
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
+ EM I+PD TYN + AL + A V+ M ++G V D T++++
Sbjct: 216 YSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG-VMPDCMTYNSILH 274
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
Y +G ++A LK++ + D+ Y L+ + G E +I+ S+
Sbjct: 275 GYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKP 334
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
+Y ++Q L D V +++I AYA +G+++ A +
Sbjct: 335 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVF 394
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDG 403
+ R++G +PNA T+ ++G ++ A+ E+ ID G G
Sbjct: 395 SKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPG 440
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 134/325 (41%), Gaps = 12/325 (3%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL---PETSKNHLTYGSLL 130
A K+ ++M KRG+ ++ L A +G + +DL +H + L+
Sbjct: 320 ARKIFDSMTKRGLKPEITTYGTLLQGYA-TKGALVEMHGLLDLMVRNGIHPDHYVFSILI 378
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
Y + ++A + KM++ L +++ + +++ + K+G E ++M +
Sbjct: 379 CAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLS 438
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
P + YN + L N AE +I EM G + + F+++ + + G ++E+
Sbjct: 439 PGNIVYNSLIHGLCTCNKWERAEELILEMLDRG-ICLNTIFFNSIIDSHCKEGRVIESEK 497
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF--PNTANISYLNMIQV 308
+ + ++ Y LI Y G + E ++ + PNT ++Y +I
Sbjct: 498 LFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNT--VTYSTLING 555
Query: 309 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 368
+ + A FKE ES + DI N+++ + R A+EL R G
Sbjct: 556 YCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIE 615
Query: 369 AKTWEIFSDYYLRNGDMKLAVDCLE 393
T+ I +N KL D L+
Sbjct: 616 LSTYNIILHGLCKN---KLTDDALQ 637
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/312 (20%), Positives = 131/312 (41%), Gaps = 3/312 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A+ + M ++G+N + ++ K ++ A YF + + S ++ Y SL++
Sbjct: 390 AMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIH 449
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C E+AE L+ +M + + +++ FNS++ + K G + + + M + P
Sbjct: 450 GLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKP 509
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ TYN + + A +++ M G + + T+S L + Y + E A
Sbjct: 510 NVITYNTLINGYCLAGKMDEAMKLLSGMVSVG-LKPNTVTYSTLINGYCKISRMEDALVL 568
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
KE+E+ D+ Y ++ QT + ++ + + +Y ++ L
Sbjct: 569 FKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCK 628
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
K A + F+ + R N+MI A K GR + A++L G PN T
Sbjct: 629 NKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWT 688
Query: 372 WEIFSDYYLRNG 383
+ + ++ + G
Sbjct: 689 YRLMAENIIGQG 700
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/361 (19%), Positives = 139/361 (38%), Gaps = 48/361 (13%)
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLM-TLYAKTGHPEK 176
E + + TYG L+ C C+ + A L + + ++ F L+ L A +
Sbjct: 82 EVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 141
Query: 177 IPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM--KRDGRVAADWTTFSN 234
+ +++ M +P+ ++YN+ ++ L N A ++ M R G D +++
Sbjct: 142 MDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTT 201
Query: 235 LASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF 294
+ + + + G +KA E+ +R D+ Y +I + + +
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKA----------- 250
Query: 295 PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAE 354
+ ++ +V +P C TY N ++ Y G+ + A
Sbjct: 251 --------MEVLNTMVKNGVMP-----------DCMTY-----NSILHGYCSSGQPKEAI 286
Query: 355 ELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE--KAIDTGRGDGGKWVPSSET 412
++ R G +P+ T+ + DY +NG C+E K D+ G K P T
Sbjct: 287 GFLKKMRSDGVEPDVVTYSLLMDYLCKNG------RCMEARKIFDSMTKRGLK--PEITT 338
Query: 413 IRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKME 472
T ++ + + + G L+++ + VF LI YA G+ ML KM
Sbjct: 339 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMR 398
Query: 473 K 473
+
Sbjct: 399 Q 399
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 120/280 (42%), Gaps = 5/280 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY L+N +CK+ E+A ++ M L +++ +N L+ K G+ E+ +
Sbjct: 411 NVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLF 470
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EM PD YT+N + L + + A + +M +G V A+ T++ L ++
Sbjct: 471 GEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEG-VIANTVTYNTLVHAFLM 529
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTAN 299
++A + + E+ R D Y LI +TG + + ++ + + FP +
Sbjct: 530 RDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIIS 589
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+ L I L + A K ++ T DI N +I K G ++ A L +
Sbjct: 590 CNIL--ISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNK 647
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ G P+A T+ + G A L K +D+G
Sbjct: 648 LQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSG 687
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 111/264 (42%), Gaps = 5/264 (1%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S N + Y L+ CK+ E+A L +M FNSL+ K E+ +
Sbjct: 444 SLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALS 503
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+ +M ++ ++ TYN + A + I A ++++EM G D T++ L
Sbjct: 504 LYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRG-CPLDNITYNGLIKAL 562
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNT 297
+ G EK +E+ + + + LI+ +TG +++ + + + R P+
Sbjct: 563 CKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDI 622
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
++Y ++I L + + A F + +S D N +I + EG +A L
Sbjct: 623 --VTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLL 680
Query: 358 ERARRRGADPNAKTWEIFSDYYLR 381
+ G PN TW I +Y ++
Sbjct: 681 YKGVDSGFIPNEVTWSILINYIVK 704
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/237 (19%), Positives = 102/237 (43%), Gaps = 6/237 (2%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
+N ++ + P P + +M + + P YT+ V M+AL V+++ A ++ +M
Sbjct: 173 YNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMA 232
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
+ G V + + L E +A + L+++ D+ + +I + G +
Sbjct: 233 KHGCV-PNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRI 291
Query: 281 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 340
E ++ + L +T ++Y ++ L + + A + + + + N +
Sbjct: 292 HEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNP----NTVLYNTL 347
Query: 341 IGAYAKEGRLENAEE-LKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 396
I Y GR E A++ L G +P+A T+ I D ++ G + A++ L + +
Sbjct: 348 ISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMV 404
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 160/400 (40%), Gaps = 26/400 (6%)
Query: 1 MAMPQRFGRTKNIAKRSKKHLEEALYDRLFKKGS-SDVSVRQQLNQFLKSKKRVFKWEVG 59
M + QR G A++ H +A Y + K G+ D V ++L + +K + +FK +
Sbjct: 83 MELFQRAG-----AQKGYSHTFDACYLLIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLF 137
Query: 60 DTLKKLRDRK-LYYPALKLSENM-EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP 117
+ K + L A +L +M + T + LD++ A N F D+
Sbjct: 138 ILIMKHYGKAGLPGQATRLLLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDML 197
Query: 118 E--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
S T+G ++ C + A +LL M + +S+ + +L+ +
Sbjct: 198 SRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVS 257
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
+ ++++M PD T+N + L I A ++++ M G + D T+ L
Sbjct: 258 EALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRG-FSTDALTYGYL 316
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR-IWRSLRLAF 294
G ++A L ++ N N Y LI+ Y +G E ++ ++ +A
Sbjct: 317 MHGLCRMGQVDEARALLNKIPNPNT----VLYNTLISGYVASGRFEEAKDLLYNNMVIAG 372
Query: 295 PNTANISYLNMIQVLVNLKDLPGA-----EKCFKEWESGCATYDIRVTNVMIGAYAKEGR 349
++ MI LV L A E K +E TY I +I + K+GR
Sbjct: 373 YEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTI-----LINGFCKQGR 427
Query: 350 LENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 389
LE A E+ +G N + ++G+++ A+
Sbjct: 428 LEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEAL 467
>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
Length = 796
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 114/251 (45%), Gaps = 1/251 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ +T+ SLL+ Y K E+A +L+KM+ S + +NSL++ Y K G E+ +
Sbjct: 290 DKVTFNSLLDVYGKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELK 349
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
QEM+ + PD TY + L + I A EM R+G + + T++ L ++
Sbjct: 350 QEMEFRGMKPDVVTYTTLISGLDRIGKIDAALATYSEMVRNG-CSPNLCTYNALIKMHGV 408
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G F + +L + D+ + L+ ++GQ G SEV +++ ++ A +
Sbjct: 409 RGKFTEMMIVFDDLRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDT 468
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y+++I A + +K DI N ++ A A+ GR AE+L
Sbjct: 469 YVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEME 528
Query: 362 RRGADPNAKTW 372
R P+ ++
Sbjct: 529 DRDCKPDELSY 539
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 86/171 (50%), Gaps = 1/171 (0%)
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 187
++++ Y K M +K E +L MKE ++ S+ +NSLM +Y++ G EK AI+ E+K+S
Sbjct: 611 AMVSIYGKNKMVKKVEEVLTLMKENSINHSAATYNSLMHMYSRLGDCEKCEAILTEIKSS 670
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
+ PD Y+YN + A + A R+ EMK G V D T++ YV +FE+
Sbjct: 671 GMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSG-VKPDIVTYNIFIKSYVANLMFEE 729
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
A ++ L + + Y ++ Y + G + E +L +P +
Sbjct: 730 AIDLVRYLVAQGCKPNERTYNSILEGYCRHGRMVEAKSFLSNLPKIYPGIS 780
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 135/315 (42%), Gaps = 7/315 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL+L + ME RGM V + + ++ IDAA + ++ S N TY +L+
Sbjct: 345 ALELKQEMEFRGMKPDVVTYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIK 404
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ + + + ++ + +N+L+ ++ + G ++ + +EMK + +P
Sbjct: 405 MHGVRGKFTEMMIVFDDLRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIP 464
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ TY + + + A + + M G + D +T++ + S G + +AE+
Sbjct: 465 ERDTYVSLISSYSRCGLFDQAMEIYKRMIEAG-IYPDISTYNAVLSALARGGRWVQAEKL 523
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
E+E+R+ D +Y L+ Y L ++ + + N +L VLVN
Sbjct: 524 FAEMEDRDCKPDELSYSSLLHAYANAKKLDKMKALSEDIYAQRIEPHN--WLVKTLVLVN 581
Query: 312 --LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
+ L EK F+E + DI V N M+ Y K ++ EE+ + + +A
Sbjct: 582 NKVNSLSETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHSA 641
Query: 370 KTWEIFSDYYLRNGD 384
T+ Y R GD
Sbjct: 642 ATYNSLMHMYSRLGD 656
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/350 (20%), Positives = 142/350 (40%), Gaps = 42/350 (12%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+T+ +LL + + + + + ++MK+ + SL++ Y++ G ++ I +
Sbjct: 432 VTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKR 491
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + I PD TYN + ALA AE++ EM+ D D ++S+L Y A
Sbjct: 492 MIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEME-DRDCKPDELSYSSLLHAYANAK 550
Query: 244 LFEK-----------------------------------AERALKELENRNAHRDLSAYQ 268
+K E+A +EL R D++
Sbjct: 551 KLDKMKALSEDIYAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRRRCSLDINVLN 610
Query: 269 FLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESG 328
++++YG+ + +V + ++ N + +Y +++ + L D E E +S
Sbjct: 611 AMVSIYGKNKMVKKVEEVLTLMKENSINHSAATYNSLMHMYSRLGDCEKCEAILTEIKSS 670
Query: 329 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 388
D N +I AY ++G+++ A L + G P+ T+ IF Y+ N + A
Sbjct: 671 GMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANLMFEEA 730
Query: 389 VDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 438
+D + + G P+ T + + + + + A+ FL L K
Sbjct: 731 IDLVRYLVAQG------CKPNERTYNSILEGYCRHGRMVEAKSFLSNLPK 774
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 113/260 (43%), Gaps = 4/260 (1%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK-IPAIIQEM 184
Y +L++ + + A A+ +M + + + + +N ++ +Y+K P K + ++ M
Sbjct: 188 YTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVVVLVDSM 247
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
K I D YTYN + A ++ +EMK G D TF++L +Y +A
Sbjct: 248 KEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAG-FEPDKVTFNSLLDVYGKARR 306
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
E+A LK++EN + Y LI+ Y + G L E + + + ++Y
Sbjct: 307 HEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTT 366
Query: 305 MIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I L + + A + E +GC+ ++ N +I + G+ + + R
Sbjct: 367 LISGLDRIGKIDAALATYSEMVRNGCSP-NLCTYNALIKMHGVRGKFTEMMIVFDDLRSA 425
Query: 364 GADPNAKTWEIFSDYYLRNG 383
G P+ TW + +NG
Sbjct: 426 GYVPDVVTWNTLLAVFGQNG 445
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 108/259 (41%), Gaps = 1/259 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY +L++C + + +A + ++MK + FNSL+ +Y K E+ ++++M
Sbjct: 258 TYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYGKARRHEEAIGVLKKM 317
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ + P TYN + A + A + +EM+ G + D T++ L S G
Sbjct: 318 ENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRG-MKPDVVTYTTLISGLDRIGK 376
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+ A E+ +L Y LI ++G G +E+ ++ LR A +++
Sbjct: 377 IDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRSAGYVPDVVTWNT 436
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
++ V FKE + + +I +Y++ G + A E+ +R G
Sbjct: 437 LLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAG 496
Query: 365 ADPNAKTWEIFSDYYLRNG 383
P+ T+ R G
Sbjct: 497 IYPDISTYNAVLSALARGG 515
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 65/318 (20%), Positives = 125/318 (39%), Gaps = 38/318 (11%)
Query: 70 LYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYG 127
L+ A+++ + M + G+ +S L +A+ AE F ++ + + L+Y
Sbjct: 481 LFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYS 540
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 187
SLL+ Y L+KMK L+ +++ A
Sbjct: 541 SLLHAYAN-------AKKLDKMKALS----------------------------EDIYAQ 565
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
I P ++ + VN +S E+ +E++R R + D + + SIY + + +K
Sbjct: 566 RIEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRR-RCSLDINVLNAMVSIYGKNKMVKK 624
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 307
E L ++ + + + Y L+ +Y + G+ + I ++ + SY +I
Sbjct: 625 VEEVLTLMKENSINHSAATYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIY 684
Query: 308 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
+ A + F E + DI N+ I +Y E A +L +G P
Sbjct: 685 AYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANLMFEEAIDLVRYLVAQGCKP 744
Query: 368 NAKTWEIFSDYYLRNGDM 385
N +T+ + Y R+G M
Sbjct: 745 NERTYNSILEGYCRHGRM 762
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 95/241 (39%), Gaps = 39/241 (16%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI--EE 218
+ +L++ +++ G A+ + M + P TYNV + + ++ + E V+ +
Sbjct: 188 YTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMS-VPWKEVVVLVDS 246
Query: 219 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 278
MK DG + D T++ L S GL+ +A + E++ D + L+ +YG+
Sbjct: 247 MKEDG-IELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYGKAR 305
Query: 279 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 338
E I VL K+ E+ T + N
Sbjct: 306 RHEEA----------------------IGVL-------------KKMENAGCTPSVVTYN 330
Query: 339 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 398
+I AY K+G LE A ELK+ RG P+ T+ R G + A+ + +
Sbjct: 331 SLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRIGKIDAALATYSEMVRN 390
Query: 399 G 399
G
Sbjct: 391 G 391
>gi|449523950|ref|XP_004168986.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 191
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 98/200 (49%), Gaps = 35/200 (17%)
Query: 21 LEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSEN 80
++++LY R+ G ++SV L+Q++ V + E+ +K+LR K + AL++
Sbjct: 27 VKDSLYRRISPVGDPNISVTPLLDQWVLESGLVQQDELRHIIKELRVYKRFKHALEV--- 83
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTE 140
E+YF ++P K + +LLNCY E +
Sbjct: 84 -----------------------------EDYFNNMPSQLKRCQVHIALLNCYAHEKYAD 114
Query: 141 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 200
KA A+L+K+KE+ +S+P+N M LY + G E++ + +K + + D +TY +
Sbjct: 115 KANAVLQKIKEMGFAKTSLPYNITMNLYHQIGEFERLDS---PLKETDVDHDQFTYTTRL 171
Query: 201 RALAAVNDISGAERVIEEMK 220
A A D +G E+++E+M+
Sbjct: 172 SAYATAFDFTGIEKIMEQME 191
>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 158/373 (42%), Gaps = 13/373 (3%)
Query: 73 PALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLL 130
PAL+L +E V +D + K + + A + + ++ E N +TY SL+
Sbjct: 172 PALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLI 231
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
+C +KA LL +M N+ + FN+L+ K G + +++ M +
Sbjct: 232 YGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVG 291
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
PD +TYN M V + A+ V M + G V D ++S + S + + ++A
Sbjct: 292 PDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMG-VTCDVHSYSVMISGLSKMKMLDEAMD 350
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQV 308
+ + N N D+ AY LI ++G ++ + + R PN I+Y ++I
Sbjct: 351 LFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNV--ITYTSLIDA 408
Query: 309 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 368
L + A K+ + ++ N+++ K+GRL +A+++ + +G + +
Sbjct: 409 LCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVD 468
Query: 369 AKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDG 428
T+ I + + A+ L K D G VP + T + F ++ D
Sbjct: 469 VVTYSIMINGLCKESLFDEALTLLSKMEDKGC------VPDAIAYETIINAFFEKDMNDK 522
Query: 429 AEGFLEILKKAVD 441
AE L + VD
Sbjct: 523 AEKLLREMIDCVD 535
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 113/282 (40%), Gaps = 9/282 (3%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+H++YG+L+N CK T A LL K++ + +N+++ K +
Sbjct: 153 DHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLY 212
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EM + P+ TY + V + A ++ EM V + TF+ L +
Sbjct: 213 CEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLK-NVNPNVCTFNTLVDGLCK 271
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLY---GQTGNLSEVYRIWRSLRLAFPNTA 298
G +A+ + + D+ Y L+ Y + G V+ I + + T
Sbjct: 272 EGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGV----TC 327
Query: 299 NI-SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
++ SY MI L +K L A F+ + D+ + +I K GR+ +A +
Sbjct: 328 DVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYV 387
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG PN T+ D ++ + A+ L+K D G
Sbjct: 388 DEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQG 429
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 71/390 (18%), Positives = 153/390 (39%), Gaps = 13/390 (3%)
Query: 59 GDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE 118
G L L K Y + L + ME G+ I ++ ++ I++A + F + +
Sbjct: 53 GKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILK 112
Query: 119 TS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK 176
+ +TY +L+ C +++ +++ + + + +L+ K G
Sbjct: 113 LGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGP 172
Query: 177 IPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLA 236
++++++ PD YN + L + A + EM + RV + T+++L
Sbjct: 173 ALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEM-FEKRVFPNVVTYTSLI 231
Query: 237 SIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPN 296
+ G +KA L E+ +N + ++ + L+ + G + E + +
Sbjct: 232 YGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVG 291
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
+Y ++ +K+ A+ F T D+ +VMI +K L+ A +L
Sbjct: 292 PDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDL 351
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTF 416
E R P+ + D ++G + A+ +++ D G+ P+ T +
Sbjct: 352 FEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQP------PNVITYTSL 405
Query: 417 MRHFEQEKDVDGAEGFLEILKKAVDDLGVE 446
+ + VD A L K + D G++
Sbjct: 406 IDALCKSHQVDKAIALL----KKIKDQGIQ 431
>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g22470, mitochondrial-like [Glycine max]
Length = 468
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 125/304 (41%), Gaps = 5/304 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
A+KL +E R V + +D + K + ++ A + + +D E N +TY +L+
Sbjct: 134 AIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLIC 193
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C A +LL +M N+ F+ L+ K G K I M + P
Sbjct: 194 AFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGKNAK--QIFHAMVQMGVNP 251
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ Y+YN+ + L + A ++ EM V D T+++L ++G A
Sbjct: 252 NVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVP-DTVTYNSLIDGLCKSGRITSALNL 310
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
+ E+ +R D+ Y L+ + NL + ++ ++ +Y +I L
Sbjct: 311 MNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCK 370
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
L A++ F+ D+ VMI KEG + A +K + G PNA T
Sbjct: 371 GGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVT 430
Query: 372 WEIF 375
+EI
Sbjct: 431 FEII 434
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/316 (19%), Positives = 138/316 (43%), Gaps = 9/316 (2%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
T N + Y ++++ CK+ + +A L +M + + + +N+L+ + G
Sbjct: 146 TRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAF 205
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+++ EM +I PD YT+++ + AL + A+++ M + G V + +++ + +
Sbjct: 206 SLLHEMILKNINPDVYTFSILIDALC--KEGKNAKQIFHAMVQMG-VNPNVYSYNIMING 262
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
+ ++A L+E+ ++N D Y LI ++G ++ + +
Sbjct: 263 LCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPAD 322
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
++Y +++ L ++L A F + + + +I K GRL+NA+EL +
Sbjct: 323 VVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQ 382
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 418
+G + T+ + + G A+ AI + D G +P++ T +R
Sbjct: 383 HLLVKGCCIDVWTYTVMISGLCKEGMFDEAL-----AIKSKMEDNG-CIPNAVTFEIIIR 436
Query: 419 HFEQEKDVDGAEGFLE 434
++ + D AE L
Sbjct: 437 SLFEKDENDKAEKLLH 452
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 50/277 (18%), Positives = 109/277 (39%), Gaps = 3/277 (1%)
Query: 114 VDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGH 173
+D+ +N +T L+NC+C + +LL K+ +L +++ + +LM G
Sbjct: 36 MDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGE 95
Query: 174 PEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFS 233
+K+ ++ A + + +Y + L + A +++ M D + +S
Sbjct: 96 VKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLL-RMIEDRSTRPNVVMYS 154
Query: 234 NLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 293
+ + L +A E++ R ++ Y LI + G L + + + L
Sbjct: 155 AIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILK 214
Query: 294 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
N ++ +I L K+ A++ F ++ N+MI K R++ A
Sbjct: 215 NINPDVYTFSILIDALC--KEGKNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEA 272
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
L + P+ T+ D ++G + A++
Sbjct: 273 MNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALN 309
>gi|449464322|ref|XP_004149878.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37230-like [Cucumis sativus]
Length = 760
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 153/361 (42%), Gaps = 21/361 (5%)
Query: 106 IDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNS 163
++ A+ ++ D+ S + +TY +++N YC+ M E+AE +MK N+ + + + +
Sbjct: 275 LETAKRFYEDMKSRGISPDVVTYNTMINGYCRFKMMEEAEQFFTEMKGKNIAPTVISYTT 334
Query: 164 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
++ Y + + +EMKA+ P+ TY+ + L + A +++ EM
Sbjct: 335 MIKGYVSVSRADDALRLFEEMKAAGEKPNDITYSTLLPGLCDAEKLPEARKILTEMVTRH 394
Query: 224 RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 283
D + F L S + G + A LK + + + Y LI + G +
Sbjct: 395 FAPKDNSIFMRLLSCQCKHGDLDAAMHVLKAMIRLSIPTEAGHYGILIENCCKAGMYDQA 454
Query: 284 YRIWRSLR----LAFPNTA----NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 335
++ +L + P + +Y +IQ L N A+ F++ ++
Sbjct: 455 VKLLENLVEKEIILRPQSTLEMEASAYNLIIQYLCNHGQTGKADTFFRQLLKKGIQDEVA 514
Query: 336 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 395
N++ G +AKEG + A E+ + RRG +A+++++ YL G+ A L+
Sbjct: 515 FNNLIRG-HAKEGNPDLAFEMLKIMGRRGVSRDAESYKLLIKSYLSKGEPADAKTALDSM 573
Query: 396 IDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL-EILKKAVD---DLGVEVFEPL 451
I+ G P S R+ M + V A + +L K + DL ++ E L
Sbjct: 574 IENGHS------PDSALFRSVMESLFADGRVQTASRVMNSMLDKGITENLDLVAKILEAL 627
Query: 452 I 452
Sbjct: 628 F 628
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 155/372 (41%), Gaps = 15/372 (4%)
Query: 97 LDLVAKVQGIDAAENYFVDLPETSK--NHLTYGSLLNCYCKELMTEKAEALLEKMKELNL 154
++++ + ++ A +D+P + + L+ Y K + ++A + +KMKEL +
Sbjct: 161 IEILGRASKLNHARCILLDMPNKGVQWDEDLFVVLIESYGKAGIVQEAVKIFQKMKELGV 220
Query: 155 GFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAER 214
S +++L + G M I P +TYNV + + A+R
Sbjct: 221 ERSVKSYDALFKEIMRRGRYMMAKRYFNAMLNEGIEPIRHTYNVMLWGFFLSLRLETAKR 280
Query: 215 VIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLY 274
E+MK G ++ D T++ + + Y + E+AE+ E++ +N + +Y +I Y
Sbjct: 281 FYEDMKSRG-ISPDVVTYNTMINGYCRFKMMEEAEQFFTEMKGKNIAPTVISYTTMIKGY 339
Query: 275 GQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES-GCATYD 333
+ R++ ++ A +I+Y ++ L + + LP A K E + A D
Sbjct: 340 VSVSRADDALRLFEEMKAAGEKPNDITYSTLLPGLCDAEKLPEARKILTEMVTRHFAPKD 399
Query: 334 IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
+ ++ K G L+ A + + R A + I + + G AV LE
Sbjct: 400 NSIFMRLLSCQCKHGDLDAAMHVLKAMIRLSIPTEAGHYGILIENCCKAGMYDQAVKLLE 459
Query: 394 KAIDTG---RGDGGKWVPSS--ETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEV- 447
++ R + +S I ++ + Q D F ++LKK + D EV
Sbjct: 460 NLVEKEIILRPQSTLEMEASAYNLIIQYLCNHGQTGKADTF--FRQLLKKGIQD---EVA 514
Query: 448 FEPLIRTYAAAG 459
F LIR +A G
Sbjct: 515 FNNLIRGHAKEG 526
>gi|255661190|gb|ACU25764.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 426
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 121/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A A L+KM++ + + +++L+ L K K +
Sbjct: 6 SPDRYTYSTLITHFGKEGLFDAALAWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 65
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S PD YN + A +I EM+ G V + ++S L ++Y
Sbjct: 66 IFSRLKRSGFSPDLVAYNAMINVFGKAKLFREARSLISEMRTAG-VMPNTVSYSTLLTMY 124
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ +R
Sbjct: 125 VENKKFLEALTVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 245 MQSRGIEPNSITYSTIISIWSKIGKLDRAAMLFQKLRSSG 284
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 108/215 (50%), Gaps = 8/215 (3%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ +++++++++K G ++ +
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWSKIGKLDRAAML 276
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S + D Y + A ++ A+R++ E+KR + D T LA
Sbjct: 277 FQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD-TAIHILAG--- 332
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR-LAFPNTAN 299
+G E+A ++ + +D++ ++ +I L+ + S V ++ +R L + +N
Sbjct: 333 -SGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYSNVVEVFDKMRGLGYFPDSN 391
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWES-GCATYD 333
++ L ++ L + A + E + GC D
Sbjct: 392 VTAL-VLNAYGKLHEFDKANNVYIEMQDEGCLFSD 425
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 8/202 (3%)
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
++ PD YTY+ + A +++M++D RV D +SNL + + + K
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALAWLQKMEQD-RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNM 305
A L+ DL AY +I ++G+ E + +R A PNT +SY +
Sbjct: 63 AISIFSRLKRSGFSPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNT--VSYSTL 120
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
+ + V K A F E D+ N+MI Y + G + A++L R+ G
Sbjct: 121 LTMYVENKKFLEALTVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180
Query: 366 DPNAKTWEIFSDYYLRNGDMKL 387
+PN ++ Y GD +L
Sbjct: 181 EPNVVSYNTLLRVY---GDAEL 199
>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 806
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 140/332 (42%), Gaps = 15/332 (4%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+T+ +L+N C E +A AL+ KM L + + +++ K G + ++ +
Sbjct: 227 ITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSK 286
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ + I PD Y+ + L S A+ + EM G +A + T++ + + G
Sbjct: 287 MEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG-IAPNVFTYNCMIDGFCSFG 345
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANIS 301
+ A+R L+++ R + D+ + LI+ + G L E ++ + R FP+T ++
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT--VT 403
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +MI A+ F A+ D+ N +I Y + R++ +L
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 459
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
RRG N T+ + ++ A D ++ I G P + T + F
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG------VCPDTITCNILLYGFC 513
Query: 422 QEKDVDGAEGFLEILKKAVDDLGVEVFEPLIR 453
+ + ++ A E+++ + DL + +I
Sbjct: 514 ENEKLEEALELFEVIQMSKIDLDTVAYNIIIH 545
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/358 (20%), Positives = 142/358 (39%), Gaps = 17/358 (4%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL L ME+ + V + +D + K A+ F ++ E + N TY +++
Sbjct: 280 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 339
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C A+ LL M E + + FN+L++ K G + + EM I P
Sbjct: 340 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 399
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D+ TYN + N A+ + + M + D TF+ + +Y A ++ +
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAKHMFDLM-----ASPDVVTFNTIIDVYCRAKRVDEGMQL 454
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVL 309
L+E+ R + + Y LI + + NL+ +++ + P+T + L +
Sbjct: 455 LREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL--LYGF 512
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
+ L A + F+ + D N++I K +++ A +L G +P+
Sbjct: 513 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 572
Query: 370 KTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVD 427
+T+ + + + A K D G P + T T +R + ++D
Sbjct: 573 QTYNVMISGFCGKSAISDANVLFHKMKDNGHE------PDNSTYNTLIRGCLKAGEID 624
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 10/152 (6%)
Query: 74 ALKLSE--NMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP--ETSKNHLTYGSL 129
AL+L E M K ++ + IH + K +D A + F LP + TY +
Sbjct: 521 ALELFEVIQMSKIDLDTVAYNIIIHG--MCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVM 578
Query: 130 LNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
++ +C + A L KMK+ + +N+L+ K G +K +I EM+++
Sbjct: 579 ISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGF 638
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKR 221
D++T + + V+D E +IE R
Sbjct: 639 SGDAFTIKMAEEIICRVSD----EEIIENYLR 666
>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Cucumis sativus]
Length = 1079
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 143/333 (42%), Gaps = 11/333 (3%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK----NHLTYGSL 129
AL L +ME +G+ V + +D + + +A+ Y V +K N ++Y +L
Sbjct: 229 ALVLIHHMECKGIQADVCTYNMFIDSLCRNS--RSAQGYLVLKKMRNKMITPNEVSYNTL 286
Query: 130 LNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
+N + KE A + +M ELNL + + +N L+ Y G+ E+ ++ M+A+ +
Sbjct: 287 INGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDV 346
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
P+ T + L A ++E + R + + + + + GL ++A
Sbjct: 347 RPNEVTIGTLLNGLYKSAKFDVARNILERYCIN-RTSLNCISHTVMIDGLCRNGLLDEAF 405
Query: 250 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL-RLAF-PNTANISYLNMIQ 307
+ L E+ H D+ + LI + + GN+++ + + R F PN N+ + +I
Sbjct: 406 QLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPN--NVIFSTLIY 463
Query: 308 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
+ ++ A K + D N ++ + + G+L AEE R G P
Sbjct: 464 NSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVP 523
Query: 368 NAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 400
N+ T++ + Y GD A ++ I G
Sbjct: 524 NSVTFDCIINGYANVGDGSGAFSVFDRMISCGH 556
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/410 (20%), Positives = 168/410 (40%), Gaps = 58/410 (14%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
TYGSLL CK +A LL+K+ + L ++ +N+L+ +K+G+ + + +E
Sbjct: 561 FTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEE 620
Query: 184 MKASSIMPDSYTYNVWMRALA---------------------AVNDI------------- 209
M ++I+PDSYTY + L +N I
Sbjct: 621 MIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAG 680
Query: 210 --SGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAY 267
A + +EM+ G ++ D +++ Y G A + + N+N +L+ +
Sbjct: 681 QSKAALYLFKEMEEKG-LSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTF 739
Query: 268 QFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 325
L+ Y + ++ ++++ +R + FPN ++Y ++I L N L K K +
Sbjct: 740 NILLHGYSRGQDIMSCFKLYNLMRRSGFFPN--RLTYHSLILGLCNHGMLELGIKMLKMF 797
Query: 326 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 385
+ +T D N++I + L+ +L + T + +D +R
Sbjct: 798 IAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVS 857
Query: 386 KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGV 445
+ + + + G ++P+S+ T M+ + D+ GA LK + LG+
Sbjct: 858 QNYFVFMHEMLKKG------FIPTSKQYCTMMKRMCRVGDIQGAFK----LKDQMVALGI 907
Query: 446 EVFE----PLIRTYAAAGRTSP---VMLRRLKMEKVEVSEASKKLLEAIC 488
+ + ++R A G+ ++ R L+M+K+ + L+ C
Sbjct: 908 SLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFC 957
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 123/306 (40%), Gaps = 33/306 (10%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
++ L++ C + +KA +L M+ + + +N+L++ K G + +I M
Sbjct: 177 SFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHM 236
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ I D TYN+++ +L + + V+++M R+ + + +++ L + +V+ G
Sbjct: 237 ECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKM-RNKMITPNEVSYNTLINGFVKEGK 295
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTANISY 302
A R E+ N +L Y LI Y GN E R+ + PN I
Sbjct: 296 IGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGT 355
Query: 303 LNMIQVLVNLKDLPGAEK-----------CFKEWESGCATYDIRVTNVMIGAYAKEGRLE 351
L L L + K C C ++ VMI + G L+
Sbjct: 356 L--------LNGLYKSAKFDVARNILERYCINRTSLNCISH-----TVMIDGLCRNGLLD 402
Query: 352 NAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSE 411
A +L + G P+ T+ + + + + G++ A + + K G +VP++
Sbjct: 403 EAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREG------FVPNNV 456
Query: 412 TIRTFM 417
T +
Sbjct: 457 IFSTLI 462
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/278 (18%), Positives = 104/278 (37%), Gaps = 1/278 (0%)
Query: 117 PETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK 176
P S N + L+ Y ++ M A M S N +M K
Sbjct: 99 PLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHL 158
Query: 177 IPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLA 236
+ + ++M S + P+ ++N+ + L + A ++ M+R+G V +++ L
Sbjct: 159 VWSFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPT-IVSYNTLL 217
Query: 237 SIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPN 296
S + G F+ A + +E + D+ Y I + ++ Y + + +R
Sbjct: 218 SWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMIT 277
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
+SY +I V + A + F E + ++ N++I Y G E A +
Sbjct: 278 PNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRV 337
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
+ PN T + ++ +A + LE+
Sbjct: 338 LDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILER 375
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/282 (19%), Positives = 122/282 (43%), Gaps = 3/282 (1%)
Query: 107 DAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMT 166
+ E Y ++ TS N +++ +++ C+ + ++A LL +M + + + F+ L+
Sbjct: 371 NILERYCIN--RTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLIN 428
Query: 167 LYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA 226
+ K G+ K ++ ++ +P++ ++ + V ++ A + M +G+ A
Sbjct: 429 GFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNA 488
Query: 227 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
++T S +AS+ E G +AE L + + + +I Y G+ S + +
Sbjct: 489 DNFTCNSLVASL-CENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSV 547
Query: 287 WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAK 346
+ + + + +Y ++++VL ++ A K K+ D N +I +K
Sbjct: 548 FDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISK 607
Query: 347 EGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 388
G L A L E + P++ T+ +R G + A
Sbjct: 608 SGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCA 649
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 54/301 (17%), Positives = 112/301 (37%), Gaps = 38/301 (12%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N + Y ++ K ++ A L ++M+E L + NS+ Y++ G ++I
Sbjct: 665 NSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLI 724
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+ + +++P+ T+N+ + + DI ++ M+R G + T+ +L
Sbjct: 725 SKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSG-FFPNRLTYHSLILGLCN 783
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS---------EVYRI------ 286
G+ E + LK ++ D + LI + +L EV+R+
Sbjct: 784 HGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDT 843
Query: 287 ---------------------WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 325
L+ F T+ Y M++ + + D+ GA K +
Sbjct: 844 QKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSK-QYCTMMKRMCRVGDIQGAFKLKDQM 902
Query: 326 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 385
+ + D M+ A G++E A + +R R P T+ + + +
Sbjct: 903 VALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNF 962
Query: 386 K 386
K
Sbjct: 963 K 963
>gi|356552149|ref|XP_003544432.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Glycine max]
Length = 481
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 125/281 (44%), Gaps = 3/281 (1%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY L+ C K + E +L +M L + + + +NS++ Y K E++ + +M
Sbjct: 197 TYSILIRCCAKFRRFDLIEHVLAEMSYLGIKCNCVTYNSIIDGYGKASMFEQMDDALNDM 256
Query: 185 -KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
+ + PD +T N ++ A I E+ +E + G + D TTF+ + Y +AG
Sbjct: 257 IENGNSHPDVFTLNSFVGAYGNAGQIDKMEKWYDEFQLMG-IKPDITTFNTMIKSYGKAG 315
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
++EK + + +E R + Y +I ++G+ G + ++ + + ++ +I+Y
Sbjct: 316 MYEKMKTVMDFMEKRFFTPTIVTYNTVIEVFGKAGEIEKMDQHFLKMKHLGVKPNSITYC 375
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+++ + + + + E+ D N +I AY + G L+ EL R R
Sbjct: 376 SLVSAYSKVGCIDKVDSIMRHVENSDVVLDTPFFNCIISAYGQAGNLKKMGELFLAMRER 435
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGG 404
+P+ T+ Y G M AV LE + + + G
Sbjct: 436 KCEPDNITFACMIQSYNTQG-MTEAVQNLENMMISAKSSLG 475
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 95/214 (44%), Gaps = 4/214 (1%)
Query: 97 LDLVAKVQGIDAAENYFVDLPETSKNH---LTYGSLLNCYCKELMTEKAEALLEKMKELN 153
+D K + ++ D+ E +H T S + Y +K E ++ + +
Sbjct: 237 IDGYGKASMFEQMDDALNDMIENGNSHPDVFTLNSFVGAYGNAGQIDKMEKWYDEFQLMG 296
Query: 154 LGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAE 213
+ FN+++ Y K G EK+ ++ M+ P TYN + +I +
Sbjct: 297 IKPDITTFNTMIKSYGKAGMYEKMKTVMDFMEKRFFTPTIVTYNTVIEVFGKAGEIEKMD 356
Query: 214 RVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITL 273
+ +MK G V + T+ +L S Y + G +K + ++ +EN + D + +I+
Sbjct: 357 QHFLKMKHLG-VKPNSITYCSLVSAYSKVGCIDKVDSIMRHVENSDVVLDTPFFNCIISA 415
Query: 274 YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 307
YGQ GNL ++ ++ ++R NI++ MIQ
Sbjct: 416 YGQAGNLKKMGELFLAMRERKCEPDNITFACMIQ 449
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 68/134 (50%), Gaps = 5/134 (3%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +++ + K EK + KMK L + +S+ + SL++ Y+K G +K+ +I++
Sbjct: 337 VTYNTVIEVFGKAGEIEKMDQHFLKMKHLGVKPNSITYCSLVSAYSKVGCIDKVDSIMRH 396
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
++ S ++ D+ +N + A ++ + M R+ + D TF+ + Y G
Sbjct: 397 VENSDVVLDTPFFNCIISAYGQAGNLKKMGELFLAM-RERKCEPDNITFACMIQSYNTQG 455
Query: 244 LFEKAERALKELEN 257
+ E A++ LEN
Sbjct: 456 MTE----AVQNLEN 465
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 55/300 (18%), Positives = 113/300 (37%), Gaps = 7/300 (2%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
+ L+ + K PE+ + + M + + P Y + A + A +E+MK
Sbjct: 127 YAKLLMMLGKCRQPEEASLLFEIMLSEGLKPTVDVYTALVSAYGQSGLLDQAFSTVEDMK 186
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
D T+S L + F+ E L E+ + Y +I YG+
Sbjct: 187 SVVDCEPDVYTYSILIRCCAKFRRFDLIEHVLAEMSYLGIKCNCVTYNSIIDGYGKASMF 246
Query: 281 SEVYRIWRSLRLAFPNTANISYLN-MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
++ + + ++ LN + N + EK + E++ DI N
Sbjct: 247 EQMDDALNDMIENGNSHPDVFTLNSFVGAYGNAGQIDKMEKWYDEFQLMGIKPDITTFNT 306
Query: 340 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
MI +Y K G E + + + +R P T+ + + + G+ ++ +++
Sbjct: 307 MIKSYGKAGMYEKMKTVMDFMEKRFFTPTIVTYNTVIEVFGKAGE----IEKMDQHFLKM 362
Query: 400 RGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
+ G K P+S T + + + + +D + + ++ + L F +I Y AG
Sbjct: 363 KHLGVK--PNSITYCSLVSAYSKVGCIDKVDSIMRHVENSDVVLDTPFFNCIISAYGQAG 420
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELM 138
MEKR T+ +++ K I+ + +F+ + N +TY SL++ Y K
Sbjct: 327 MEKRFFTPTIVTYNTVIEVFGKAGEIEKMDQHFLKMKHLGVKPNSITYCSLVSAYSKVGC 386
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
+K ++++ ++ ++ + FN +++ Y + G+ +K+ + M+ PD+ T+
Sbjct: 387 IDKVDSIMRHVENSDVVLDTPFFNCIISAYGQAGNLKKMGELFLAMRERKCEPDNITFAC 446
Query: 199 WMRA 202
+++
Sbjct: 447 MIQS 450
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/369 (21%), Positives = 165/369 (44%), Gaps = 17/369 (4%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELM 138
M KR ++ ++ I ++ + + ++ AE+ D+ S N +TY +L++ YCK
Sbjct: 191 MIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGS 250
Query: 139 TEK---AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYT 195
K AEA +++M + + + FN+L+ + K + +EM+ + P+ T
Sbjct: 251 AGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVT 310
Query: 196 YNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 255
YN + L + A + ++M G + + T++ L + + + + ++A + ++
Sbjct: 311 YNSLINGLCNNGKLEEAIDLWDKMVGLG-LKPNIVTYNALINGFCKKKMMKEATKVFDDV 369
Query: 256 ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLK 313
+ ++ + +I Y + G + E + + S+ PN + +Y +I L +
Sbjct: 370 SKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVS--TYNCLIAGLCRKQ 427
Query: 314 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 373
DL A++ E E+ D+ N++I K + NAE+L G PN T+
Sbjct: 428 DLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYN 487
Query: 374 IFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 433
D Y G +K A++ R + + P+ T ++ + + ++ A G L
Sbjct: 488 TLMDGYCMEGKLKAALNV------RTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLL 541
Query: 434 -EILKKAVD 441
E+L+K ++
Sbjct: 542 NEMLEKGLN 550
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 104/253 (41%), Gaps = 36/253 (14%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY +L+N +CK+ M ++A + + + + L + + FN+++ Y K G E+ ++
Sbjct: 342 NIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLC 401
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M I+P+ TYN + L D+ A+ ++ EM+ G + D T++ L +
Sbjct: 402 SSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKG-LKGDVVTYNILIDGLCK 460
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
AE+ L E+ N + Y L+ Y G L + +
Sbjct: 461 NDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRM----------- 509
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
EK + + TY NV+I Y K +LE A L
Sbjct: 510 -----------------EK--ERKQPNVVTY-----NVLIKGYCKINKLEAANGLLNEML 545
Query: 362 RRGADPNAKTWEI 374
+G +PN T++I
Sbjct: 546 EKGLNPNRTTYDI 558
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 115/311 (36%), Gaps = 44/311 (14%)
Query: 133 YCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPD 192
Y K L A + K+ S N L++ K + + +EM I +
Sbjct: 140 YVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTN 199
Query: 193 SYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE---AGLFEKAE 249
T+N+++ L ++ AE IE+MK G ++ + T++ L Y + AG KAE
Sbjct: 200 LNTFNIFINGLCRAGKLNKAEDAIEDMKAWG-ISPNVVTYNTLVDGYCKRGSAGKMYKAE 258
Query: 250 -----------------------------------RALKELENRNAHRDLSAYQFLITLY 274
+A +E++ + ++ Y LI
Sbjct: 259 AFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGL 318
Query: 275 GQTGNLSEVYRIW-RSLRLAF-PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY 332
G L E +W + + L PN ++Y +I K + A K F +
Sbjct: 319 CNNGKLEEAIDLWDKMVGLGLKPNI--VTYNALINGFCKKKMMKEATKVFDDVSKQELVP 376
Query: 333 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 392
++ N MI AY KEG +E L G PN T+ R D++ A + L
Sbjct: 377 NVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELL 436
Query: 393 EKAIDTG-RGD 402
+ + G +GD
Sbjct: 437 NEMENKGLKGD 447
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 87/209 (41%), Gaps = 3/209 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP--ETSKNHLTYGSLLN 131
A+ L + M G+ + ++ K + + A F D+ E N +T+ ++++
Sbjct: 327 AIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMID 386
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
YCKE M E+ +L M + + + +N L+ + + ++ EM+ +
Sbjct: 387 AYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKG 446
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D TYN+ + L + AE+++ EM G + + T++ L Y G + A
Sbjct: 447 DVVTYNILIDGLCKNDKSRNAEKLLNEMFNLG-LKPNHVTYNTLMDGYCMEGKLKAALNV 505
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNL 280
+E ++ Y LI Y + L
Sbjct: 506 RTRMEKERKQPNVVTYNVLIKGYCKINKL 534
Score = 38.5 bits (88), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 63/154 (40%), Gaps = 16/154 (10%)
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
++ LV + E +KE ++ N+ I + G+L AE+ E + G
Sbjct: 171 LLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWG 230
Query: 365 ADPNAKTWEIFSDYYLRNGD---MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
PN T+ D Y + G M A +++ + K P+ T T + F
Sbjct: 231 ISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEML------ANKICPNEVTFNTLIDGFC 284
Query: 422 QEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 455
++++V A KKA +++ + +P I TY
Sbjct: 285 KDENVAAA-------KKAFEEMQKQGLKPNIVTY 311
>gi|414864941|tpg|DAA43498.1| TPA: hypothetical protein ZEAMMB73_100357 [Zea mays]
Length = 788
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 125/266 (46%), Gaps = 4/266 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+++TY SL+ + +KA LEKMK + L +P++ +++ +AK G +
Sbjct: 488 DYVTYTSLIQLLSTAKLPKKAIYYLEKMKVVKLLSDCIPYSVVISSFAKNGDLRMSEYLF 547
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+EM S + PD + Y++ + A A V ++ A MK+DG + + T +++L +Y +
Sbjct: 548 REMIMSGVRPDIFVYSILIDAYAEVGNVQQASAYFGLMKKDG-LYENVTIYNSLIKLYTK 606
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN-I 300
G +A A K L++ + + L A +I LY + E ++ SL++ AN
Sbjct: 607 VGYVPEARGAYKLLKSLDTNAILYASNCMIDLYSDHCMVKEACEVFDSLKVR--GIANEF 664
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
S+ M+ + + A + KE ++ + N +I Y GR E A ++ ++
Sbjct: 665 SHAMMVCMYKKVGRYDVAHRVCKEMQALGLLTQLLSYNSVIQMYVSGGRTEEALKIFKKM 724
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMK 386
PN T++ +R+G K
Sbjct: 725 LASNTPPNDATFQALKVILVRSGVTK 750
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 99/439 (22%), Positives = 162/439 (36%), Gaps = 69/439 (15%)
Query: 72 YPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS---------KN 122
+ AL +M KRG+ +I + K + AE +F S N
Sbjct: 188 WTALLWLGDMCKRGLMPDEVTMSIVMQAHKKAGEYETAEIFFERWSSDSIRRMEGRSHYN 247
Query: 123 HLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQ 182
TY +L++ Y K EK +M + S + FNS++ + K EK+ ++++
Sbjct: 248 LYTYNTLIDTYGKAGHLEKVSDTFNQMLSEGVAPSVVTFNSMIHAWGKHHRMEKVASLVR 307
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
M+ PD+ TYN+ + +DI AE +MK + V D + L Y
Sbjct: 308 MMEEFQCFPDTRTYNILIALYRESDDIDIAEYYYWKMKTENLVP-DVVSCRTLLYGYSIR 366
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPN---TAN 299
G+ KAE LKE++ R D L +Y G L + +R + + +AN
Sbjct: 367 GMVTKAEALLKEMDERGFMVDEYTQSALTRMYVNVGMLEQAWRWFDRFHHHMNSECFSAN 426
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCA----TYDIRVTNVMIGAYAKEGRLENAEE 355
I +V AEK F C + NVMI AY G L+ A E
Sbjct: 427 IDAFGEKGYIV------LAEKAFV-----CCLKKKMISVSACNVMIKAYGLVGMLDEACE 475
Query: 356 LKERARRRGADPNAKTW----EIFSD--------YYL----------------------- 380
+ R P+ T+ ++ S YYL
Sbjct: 476 IANGMERYDILPDYVTYTSLIQLLSTAKLPKKAIYYLEKMKVVKLLSDCIPYSVVISSFA 535
Query: 381 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 440
+NGD++++ + I +G P + + + +V A + ++KK
Sbjct: 536 KNGDLRMSEYLFREMIMSGVR------PDIFVYSILIDAYAEVGNVQQASAYFGLMKKDG 589
Query: 441 DDLGVEVFEPLIRTYAAAG 459
V ++ LI+ Y G
Sbjct: 590 LYENVTIYNSLIKLYTKVG 608
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 113/271 (41%), Gaps = 26/271 (9%)
Query: 138 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 197
M ++A + M+ ++ + + SL+ L + P+K +++MK ++ D Y+
Sbjct: 469 MLDEACEIANGMERYDILPDYVTYTSLIQLLSTAKLPKKAIYYLEKMKVVKLLSDCIPYS 528
Query: 198 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 257
V + + A D+ +E + EM G V D +S L Y E G ++A ++
Sbjct: 529 VVISSFAKNGDLRMSEYLFREMIMSG-VRPDIFVYSILIDAYAEVGNVQQASAYFGLMKK 587
Query: 258 RNAHRDLSAYQFLITLYGQTGNLSE---VYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 314
+ +++ Y LI LY + G + E Y++ +SL +T I Y + + D
Sbjct: 588 DGLYENVTIYNSLIKLYTKVGYVPEARGAYKLLKSL-----DTNAILYASNCMI-----D 637
Query: 315 LPGAEKCFKEWESGCATYD-IRVTNV--------MIGAYAKEGRLENAEELKERARRRGA 365
L KE C +D ++V + M+ Y K GR + A + + + G
Sbjct: 638 LYSDHCMVKE---ACEVFDSLKVRGIANEFSHAMMVCMYKKVGRYDVAHRVCKEMQALGL 694
Query: 366 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 396
++ Y+ G + A+ +K +
Sbjct: 695 LTQLLSYNSVIQMYVSGGRTEEALKIFKKML 725
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 96/228 (42%), Gaps = 5/228 (2%)
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 196
++ EKA K K +++ N ++ Y G ++ I M+ I+PD TY
Sbjct: 437 VLAEKAFVCCLKKKMISVS----ACNVMIKAYGLVGMLDEACEIANGMERYDILPDYVTY 492
Query: 197 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 256
++ L+ A +E+MK ++ +D +S + S + + G +E +E+
Sbjct: 493 TSLIQLLSTAKLPKKAIYYLEKMKV-VKLLSDCIPYSVVISSFAKNGDLRMSEYLFREMI 551
Query: 257 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 316
D+ Y LI Y + GN+ + + ++ Y ++I++ + +P
Sbjct: 552 MSGVRPDIFVYSILIDAYAEVGNVQQASAYFGLMKKDGLYENVTIYNSLIKLYTKVGYVP 611
Query: 317 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
A +K +S + +N MI Y+ ++ A E+ + + RG
Sbjct: 612 EARGAYKLLKSLDTNAILYASNCMIDLYSDHCMVKEACEVFDSLKVRG 659
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 53/275 (19%), Positives = 107/275 (38%), Gaps = 10/275 (3%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N + Y +LN K + L +M + + + +L+ + + G +
Sbjct: 135 NVIHYNVVLNTVGKARRWDLVLRLWYEMHSFGVAPDNSTYGTLINVCCQGGREWTALLWL 194
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRD------GRVAADWTTFSNL 235
+M +MPD T ++ M+A + AE E D GR + T++ L
Sbjct: 195 GDMCKRGLMPDEVTMSIVMQAHKKAGEYETAEIFFERWSSDSIRRMEGRSHYNLYTYNTL 254
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR--LA 293
Y +AG EK ++ + + + +I +G+ + +V + R +
Sbjct: 255 IDTYGKAGHLEKVSDTFNQMLSEGVAPSVVTFNSMIHAWGKHHRMEKVASLVRMMEEFQC 314
Query: 294 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
FP+T +Y +I + D+ AE + + ++ D+ ++ Y+ G + A
Sbjct: 315 FPDTR--TYNILIALYRESDDIDIAEYYYWKMKTENLVPDVVSCRTLLYGYSIRGMVTKA 372
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 388
E L + RG + T + Y+ G ++ A
Sbjct: 373 EALLKEMDERGFMVDEYTQSALTRMYVNVGMLEQA 407
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/189 (20%), Positives = 80/189 (42%), Gaps = 4/189 (2%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGS--LLNCYCKELM 138
M+K G+ + V+ + L KV + A + L N + Y S +++ Y M
Sbjct: 585 MKKDGLYENVTIYNSLIKLYTKVGYVPEARGAYKLLKSLDTNAILYASNCMIDLYSDHCM 644
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
++A + + +K + + ++ +Y K G + + +EM+A ++ +YN
Sbjct: 645 VKEACEVFDSLKVRGIA-NEFSHAMMVCMYKKVGRYDVAHRVCKEMQALGLLTQLLSYNS 703
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
++ + A ++ ++M D TF L I V +G+ + R L+ L
Sbjct: 704 VIQMYVSGGRTEEALKIFKKMLASNTPPND-ATFQALKVILVRSGVTKNETRKLELLRRN 762
Query: 259 NAHRDLSAY 267
N+H L +
Sbjct: 763 NSHDCLHQW 771
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 133/324 (41%), Gaps = 9/324 (2%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
+ N TY L+ C E+A ++ M+ +++ +N+L+ + + G +
Sbjct: 148 VAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAE 207
Query: 179 AIIQEMK-ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
++ M+ + P+ T+N + L + GA +V +EM R+G +A D +++ L S
Sbjct: 208 RVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREG-LAPDVVSYNTLLS 266
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
Y + G ++ E+ R D+ + LI + GNL + + +R
Sbjct: 267 GYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRM 326
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
+++ +I L A +E + N +I Y K GR++ A EL
Sbjct: 327 NEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELI 386
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 417
+ P+ T+ Y + G++ A +K + G +P + T + +
Sbjct: 387 REMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG------VLPDAITYSSLI 440
Query: 418 RHFEQEKDV-DGAEGFLEILKKAV 440
R +EK + D E F +L+ V
Sbjct: 441 RGLCEEKRLNDACELFENMLQLGV 464
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 117/254 (46%), Gaps = 5/254 (1%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
++Y +LL+ YCK ++ A+ +M + L + F SL+ K G+ E+ A++ +
Sbjct: 259 VSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQ 318
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ + + T+ + + A +EEM++ G + ++ L + Y + G
Sbjct: 319 MRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCG-IQPSVVCYNALINGYCKLG 377
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANIS 301
+ A ++E+E + D+ Y +I+ Y + GNL +++ + + + P+ I+
Sbjct: 378 RMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDA--IT 435
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y ++I+ L K L A + F+ D +I + KEG +E A L +
Sbjct: 436 YSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMI 495
Query: 362 RRGADPNAKTWEIF 375
R+G P+ T+ +
Sbjct: 496 RKGVLPDVVTYSVL 509
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 120/278 (43%), Gaps = 1/278 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +T+ S++N CK E A + ++M L + +N+L++ Y K G + A+
Sbjct: 222 NLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVF 281
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EM ++PD T+ + A ++ A ++ +M+ G + + TF+ L + +
Sbjct: 282 SEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG-LRMNEVTFTALIDGFCK 340
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G + A A++E+ + Y LI Y + G + + R + ++
Sbjct: 341 KGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVT 400
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I + +L A + ++ D + +I +E RL +A EL E
Sbjct: 401 YSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENML 460
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ G P+ T+ D + + G+++ A+ ++ I G
Sbjct: 461 QLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKG 498
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 106/241 (43%), Gaps = 18/241 (7%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY SL+ C+E A L E M +L + + +L+ + K G+ EK ++ E
Sbjct: 434 ITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDE 493
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA--------------ADW 229
M ++PD TY+V + L+ A R++ ++ + V A++
Sbjct: 494 MIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEF 553
Query: 230 TTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS 289
+ L + GL ++A++ + + +RN D S Y LI + + GN+ + +
Sbjct: 554 KSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQ 613
Query: 290 -LRLAF-PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKE 347
LR F PN+ S +++++ L + A+ ++ + C D + +I KE
Sbjct: 614 MLRSGFSPNST--STISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKE 671
Query: 348 G 348
G
Sbjct: 672 G 672
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/383 (18%), Positives = 159/383 (41%), Gaps = 26/383 (6%)
Query: 72 YPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSL 129
+ +L + M +RG+ V + K ++ A + E N +T+ +L
Sbjct: 275 HESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTAL 334
Query: 130 LNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
++ +CK+ + A +E+M++ + S + +N+L+ Y K G + +I+EM+A +
Sbjct: 335 IDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRV 394
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
PD TY+ + V ++ A ++ ++M + G V D T+S+L E A
Sbjct: 395 KPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG-VLPDAITYSSLIRGLCEEKRLNDAC 453
Query: 250 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYL---- 303
+ + D Y LI + + GN+ + + + + P+ S L
Sbjct: 454 ELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGL 513
Query: 304 ----------NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
++ L + +P K + C+ + + ++ + +G ++ A
Sbjct: 514 SKSARTKEAHRLLFKLYHEDPVPDNIK-YDALMLCCSKAEFKSVVALLKGFCMKGLMKEA 572
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETI 413
+++ + R + + I + R G+++ A+ ++ + +G + P+S +
Sbjct: 573 DKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSG------FSPNSTST 626
Query: 414 RTFMRHFEQEKDVDGAEGFLEIL 436
+ +R +E V A+ ++ L
Sbjct: 627 ISLVRGLFEEGMVVEADNAIQDL 649
>gi|302761054|ref|XP_002963949.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
gi|300167678|gb|EFJ34282.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
Length = 1365
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 141/351 (40%), Gaps = 43/351 (12%)
Query: 90 VSDQAIHLDLVA---KVQGIDAAENYFVDLPET--SKNHLTYGSLLNCYCKELMTEKAEA 144
V D A+H+ ++A K++ AE F DL + + N Y +LL+ Y + E+A
Sbjct: 643 VKDSAMHVAIIASYGKLKLWQNAEIVFRDLQQHGFAGNTSAYSALLSAYAETGNFERATR 702
Query: 145 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 204
L+ M L ++ N ++ + + G ++I Q + I P+S T+ V A +
Sbjct: 703 ALDNMVAAGLQPNATCANYVLEAFGRAGKAKEISEFFQRLPEMGISPNSRTFVVIFHAFS 762
Query: 205 AVNDISGAERVIEEMKRDGRVAA----------------------------------DWT 230
++ A + +MK G + D
Sbjct: 763 RNGNLEEARSMYRQMKEAGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDID 822
Query: 231 TFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
++++ S+Y + G + A K ++ D + + LI LY + + E + R +
Sbjct: 823 IYNHMISLYSKLGSYRNAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREM 882
Query: 291 RLAFPNTANIS-YLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEG 348
+ N NIS Y +I L+ AE FK E+GC D NVMI Y K G
Sbjct: 883 -IKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAETGCKP-DATAYNVMINVYRKAG 940
Query: 349 RLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
EE+ E+ + G +P+ T + D Y + G A + LE + G
Sbjct: 941 EHRKIEEIIEQMKVDGFEPSLTTIHMLMDSYGKGGATGKAEEVLETLPEIG 991
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 124/293 (42%), Gaps = 40/293 (13%)
Query: 94 AIHLDLVAKVQGIDAAENYFVDLPETSKNHLT--YGSLLNCYCKELMTEKAEALLEKMKE 151
A+ L ++ + A+ F D E+S + Y SL++ Y + + LL +M++
Sbjct: 95 AVMLSVLGRANQPGLAQELF-DRAESSIGNCVQVYNSLMSVYARHGDWNSVQQLLCRMQD 153
Query: 152 LNLGFSSMPFNSLMTLYAKTGHPEKIPA-IIQEMKASSIMPDSYTYNVWMRALAAVNDIS 210
+ FN ++ + G E + + ++Q++ A+ + PD+ TYN + A + N +S
Sbjct: 154 RGCRPDLVTFNIVIKARTRGGMQEGLASSLLQDVYAAGLRPDTITYNTLISACSLNNRLS 213
Query: 211 GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 270
A + EEM+R G W T++ + S+Y AG E A + ++ + D Y +
Sbjct: 214 DAILIFEEMQRQGCDPDIW-TYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSV 272
Query: 271 ITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCA 330
+ + + G + EV RI +R A ++ I+Y
Sbjct: 273 LHAFARDGRIEEVERIRGMMRDARCSSDEITY---------------------------- 304
Query: 331 TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
N MI Y K G AEEL + + G P++ T+ + D + G
Sbjct: 305 -------NTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAG 350
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 103/260 (39%), Gaps = 36/260 (13%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +L++ A + E+M+ +N+++++Y + G E +I +
Sbjct: 197 ITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRI 256
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ PD+ TYN + A A I ER I M RD R ++D T++ + +Y +AG
Sbjct: 257 MQEQGFTPDAVTYNSVLHAFARDGRIEEVER-IRGMMRDARCSSDEITYNTMIHMYGKAG 315
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
+ KAE +++ D + LI G+ G F N A +
Sbjct: 316 MHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAG---------------FVNEAAAMFE 360
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+M++ V ++ + MI AYAK +AE R
Sbjct: 361 DMLKSQVRPT--------------------LQAFSAMICAYAKADMFTDAEHTYSCMLRA 400
Query: 364 GADPNAKTWEIFSDYYLRNG 383
G P+ + + D + + G
Sbjct: 401 GVRPDLLAYSVMLDVFFKAG 420
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 136/326 (41%), Gaps = 3/326 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A + +NM G+ + L+ + +F LPE S N T+ + +
Sbjct: 700 ATRALDNMVAAGLQPNATCANYVLEAFGRAGKAKEISEFFQRLPEMGISPNSRTFVVIFH 759
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ + E+A ++ +MKE S F +L+ LY++ +++++K + +
Sbjct: 760 AFSRNGNLEEARSMYRQMKEAGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLEL 819
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D YN + + + A V + M+ G + D TTF+ L +Y + ++A+
Sbjct: 820 DIDIYNHMISLYSKLGSYRNAALVFKGMQEIG-CSPDATTFNTLIMLYSRNQMVQEAQAL 878
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
L+E+ ++S Y LI+ YG+ + +++S+ +Y MI V
Sbjct: 879 LREMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRK 938
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+ E+ ++ + + ++++ +Y K G AEE+ E G P+A
Sbjct: 939 AGEHRKIEEIIEQMKVDGFEPSLTTIHMLMDSYGKGGATGKAEEVLETLPEIGMSPDAIH 998
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAID 397
+ + +L N D AV L K D
Sbjct: 999 YTSIINSHLNNKDYLSAVIWLRKMTD 1024
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 95/207 (45%), Gaps = 3/207 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLN 131
A+ + E M+++G + + + + + ++AA + F + E + + +TY S+L+
Sbjct: 215 AILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLH 274
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ ++ E+ E + M++ + +N+++ +Y K G K + +MK P
Sbjct: 275 AFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCP 334
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
DS T+ V + L ++ A + E+M + +V FS + Y +A +F AE
Sbjct: 335 DSVTFTVLIDTLGKAGFVNEAAAMFEDMLK-SQVRPTLQAFSAMICAYAKADMFTDAEHT 393
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTG 278
+ DL AY ++ ++ + G
Sbjct: 394 YSCMLRAGVRPDLLAYSVMLDVFFKAG 420
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 96/219 (43%), Gaps = 5/219 (2%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y +++ Y K A + + M+E+ + FN+L+ LY++ ++ A+++EM
Sbjct: 824 YNHMISLYSKLGSYRNAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMI 883
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
+ P+ TY + A + AE V + + G D T ++ + ++Y +AG
Sbjct: 884 KTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAETG-CKPDATAYNVMINVYRKAGEH 942
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
K E +++++ L+ L+ YG+ G + + +L + I Y ++
Sbjct: 943 RKIEEIIEQMKVDGFEPSLTTIHMLMDSYGKGGATGKAEEVLETLPEIGMSPDAIHYTSI 1002
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAY 344
I +N KD A ++ C +R T+V I +
Sbjct: 1003 INSHLNNKDYLSAVIWLRKMTDAC----VRPTHVTITCF 1037
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 103/273 (37%), Gaps = 11/273 (4%)
Query: 187 SSIMPD--SYTYNVWMRALAAVNDISGAERVIEEMKRDGRV-AADWTTFSNLASIYVEAG 243
SSI P ++ Y LA S AE + + G+V +D+ L + Y AG
Sbjct: 533 SSIEPSVAAHLYKRLAVMLAKAGRFSEAEEEMRTSQTYGQVQVSDF--LKVLVASYDRAG 590
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
+ ++A ++ D Q + Y + G + + AF + ++
Sbjct: 591 MQDEALARFLDMTTEGLEMDAEVLQTAVMCYCRKGFAFVAHELLIDCLHAFDVKDSAMHV 650
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I LK AE F++ + + + ++ AYA+ G E A +
Sbjct: 651 AIIASYGKLKLWQNAEIVFRDLQQHGFAGNTSAYSALLSAYAETGNFERATRALDNMVAA 710
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQE 423
G PNA + + R G K + ++ + G P+S T F +
Sbjct: 711 GLQPNATCANYVLEAFGRAGKAKEISEFFQRLPEMGIS------PNSRTFVVIFHAFSRN 764
Query: 424 KDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYA 456
+++ A +K+A ++VF+ L+ Y+
Sbjct: 765 GNLEEARSMYRQMKEAGFSPSIQVFKALLALYS 797
>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
Length = 1003
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 139/325 (42%), Gaps = 3/325 (0%)
Query: 62 LKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS- 120
+ +LR ++L A L+ + GM V +D + K + D A+ F ++
Sbjct: 310 IDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGL 369
Query: 121 -KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
N +TY L++ CK M E A L +KM++ + + P+NSL+ Y K G ++
Sbjct: 370 EPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARG 429
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
++ M + P + +Y+ + L D+S + EM G +A + TF+ L + +
Sbjct: 430 LLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERG-IAWNNYTFTALINGF 488
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
+ ++A R ++ + N + + +I Y GN+ + ++++ + N
Sbjct: 489 CKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDN 548
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+Y ++I L + A + + E+ A + ++ + +EGR L +
Sbjct: 549 YTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDE 608
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGD 384
RG + ++ I L+ D
Sbjct: 609 MAVRGVKLDLVSFTIIVYAALKQHD 633
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 124/279 (44%), Gaps = 2/279 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N+ T+ +L+N +CK+ ++A L +KM + N+ + + FN ++ Y G+ K +
Sbjct: 477 NNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLY 536
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+M + PD+YTY + L + +S A + +++ V +++ + L + E
Sbjct: 537 DQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFRE 596
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G F + E+ R DL ++ ++ + + + ++R ++ +I
Sbjct: 597 -GRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIF 655
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y MI L +++ A C+ + + + V+I K G L +AE L +
Sbjct: 656 YTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEML 715
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 400
PN T+ F DY+ GDM+ A D L A+ G
Sbjct: 716 AGNVLPNKFTYNCFLDYFATEGDMEKAKD-LHSAMLQGH 753
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/340 (20%), Positives = 131/340 (38%), Gaps = 17/340 (5%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
Y + + YC+ + A L+ +M+ + S++P+N LM K ++ + M
Sbjct: 200 VYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVM 259
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ D TY + + ++ A R+ +M R G V ++ S + + L
Sbjct: 260 VNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSE-ANCSFMIDELRKKEL 318
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISY 302
E+A +L + ++ AY LI + + R+++ + R PN ++Y
Sbjct: 319 VEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPN--EVTY 376
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+I L + A F + + N +I Y K+G L+ A L +
Sbjct: 377 AILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVK 436
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ 422
G P A ++ RNGD+ C+E + G W ++ T + F +
Sbjct: 437 EGLTPTAASYSPLIAGLCRNGDLS---SCMELHREMAE-RGIAW--NNYTFTALINGFCK 490
Query: 423 EKDVDGAEGFLEILKKAVDDLGVE---VFEPLIRTYAAAG 459
+K +D A + K +D + F +I Y G
Sbjct: 491 DKKMDEAA---RLFDKMIDSNVIPNEVTFNVMIEGYCLVG 527
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 12/173 (6%)
Query: 103 VQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFN 162
+Q ++ + VD S N +T+ L+N CK AE L ++M N+ + +N
Sbjct: 670 IQALNCWDQMVVD--GYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYN 727
Query: 163 SLMTLYAKTGHPEKI----PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 218
+ +A G EK A++Q AS + ++N+ ++ L I A ++ +
Sbjct: 728 CFLDYFATEGDMEKAKDLHSAMLQGHLASIV-----SFNILIKGLCKAGKIQEAIDLMSK 782
Query: 219 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 271
+ G + D ++S + + G KA E+ + D+ AY I
Sbjct: 783 ITESG-FSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFI 834
>gi|334183972|ref|NP_177860.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806398|sp|Q9FVX2.2|PP129_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g77360, mitochondrial; Flags: Precursor
gi|332197848|gb|AEE35969.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 120/292 (41%), Gaps = 9/292 (3%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
F +M YA+ ++ M+ + P+ +N + AL ++ A+ V E M+
Sbjct: 171 FCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMR 230
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
R D T+S L + + KA +E+ + H D+ Y ++ + + G +
Sbjct: 231 --DRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRV 288
Query: 281 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 340
E I RS+ + Y ++ L A F E E D+ V N +
Sbjct: 289 DEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSL 348
Query: 341 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 400
IGA+ K R++N + + + +G PN+K+ I + + G+ A D K I
Sbjct: 349 IGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCE 408
Query: 401 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLI 452
P ++T ++ F ++K+++ A+ + ++K + F LI
Sbjct: 409 -------PDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLI 453
>gi|449507993|ref|XP_004163187.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g37230-like [Cucumis sativus]
Length = 760
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 153/361 (42%), Gaps = 21/361 (5%)
Query: 106 IDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNS 163
++ A+ ++ D+ S + +TY +++N YC+ M E+AE +MK N+ + + + +
Sbjct: 275 LETAKRFYEDMKSRGISPDVVTYNTMINGYCRFKMMEEAEQFFTEMKGKNIAPTVISYTT 334
Query: 164 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
++ Y + + +EMKA+ P+ TY+ + L + A +++ EM
Sbjct: 335 MIKGYVSVSRADDALRLFEEMKAAGEKPNDITYSTLLPGLCDAEKLPEARKILTEMVTRH 394
Query: 224 RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 283
D + F L S + G + A LK + + + Y LI + G +
Sbjct: 395 FAPKDNSIFMRLLSCQCKHGDLDAAMHVLKAMIRLSIPTEAGHYGILIENCCKAGMYDQA 454
Query: 284 YRIWRSLR----LAFPNTA----NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 335
++ +L + P + +Y +IQ L N A+ F++ ++
Sbjct: 455 VKLLENLVEKEIILRPQSTLEMEASAYNLIIQYLCNHGQTGKADTFFRQLLKKGIQDEVA 514
Query: 336 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 395
N++ G +AKEG + A E+ + RRG +A+++++ YL G+ A L+
Sbjct: 515 FNNLIRG-HAKEGNPDLAFEMLKIMGRRGVSRDAESYKLLIKSYLSKGEPADAKTALDSM 573
Query: 396 IDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL-EILKKAVD---DLGVEVFEPL 451
I+ G P S R+ M + V A + +L K + DL ++ E L
Sbjct: 574 IENGHS------PDSALFRSVMESLFADGRVQTASRVMNSMLDKGITENLDLVAKILEAL 627
Query: 452 I 452
Sbjct: 628 F 628
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 155/372 (41%), Gaps = 15/372 (4%)
Query: 97 LDLVAKVQGIDAAENYFVDLPETSK--NHLTYGSLLNCYCKELMTEKAEALLEKMKELNL 154
++++ + ++ A +D+P + + L+ Y K + ++A + +KMKEL +
Sbjct: 161 IEILGRASKLNHARCILLDMPNKGVQWDEDLFVVLIESYGKAGIVQEAVKIFQKMKELGV 220
Query: 155 GFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAER 214
S +++L + G M I P +TYNV + + A+R
Sbjct: 221 ERSVKSYDALFKEIMRRGRYMMAKRYFNAMLNEGIEPIRHTYNVMLWGFFLSLRLETAKR 280
Query: 215 VIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLY 274
E+MK G ++ D T++ + + Y + E+AE+ E++ +N + +Y +I Y
Sbjct: 281 FYEDMKSRG-ISPDVVTYNTMINGYCRFKMMEEAEQFFTEMKGKNIAPTVISYTTMIKGY 339
Query: 275 GQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES-GCATYD 333
+ R++ ++ A +I+Y ++ L + + LP A K E + A D
Sbjct: 340 VSVSRADDALRLFEEMKAAGEKPNDITYSTLLPGLCDAEKLPEARKILTEMVTRHFAPKD 399
Query: 334 IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
+ ++ K G L+ A + + R A + I + + G AV LE
Sbjct: 400 NSIFMRLLSCQCKHGDLDAAMHVLKAMIRLSIPTEAGHYGILIENCCKAGMYDQAVKLLE 459
Query: 394 KAIDTG---RGDGGKWVPSS--ETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEV- 447
++ R + +S I ++ + Q D F ++LKK + D EV
Sbjct: 460 NLVEKEIILRPQSTLEMEASAYNLIIQYLCNHGQTGKADTF--FRQLLKKGIQD---EVA 514
Query: 448 FEPLIRTYAAAG 459
F LIR +A G
Sbjct: 515 FNNLIRGHAKEG 526
>gi|410110095|gb|AFV61127.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
montevidensis]
Length = 418
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 120/275 (43%), Gaps = 1/275 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +I +
Sbjct: 1 TYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRL 60
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
K S PD YN + A +I EMK G V + T++S L ++YVE
Sbjct: 61 KRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAG-VMPNTTSYSTLLTMYVENKK 119
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
F +A E+ DL+ +I +YGQ G E +++ +R +SY
Sbjct: 120 FLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNT 179
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+++V + + A F+ + ++ N M+ Y K E A L + + RG
Sbjct: 180 LLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRG 239
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+PN+ T+ + + G + A +K +G
Sbjct: 240 IEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 274
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/276 (19%), Positives = 126/276 (45%), Gaps = 5/276 (1%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+ Y +++N + K + +A +L+ +MK + ++ +++L+T+Y + + ++ E
Sbjct: 70 VAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTTSYSTLLTMYVENKKFLEALSVFSE 129
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ + D T N+ + + A+++ M++ G + + +++ L +Y +A
Sbjct: 130 MREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG-IEPNVVSYNTLLRVYGDAE 188
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
LF +A + ++ +N +++ Y ++ +YG+T + + + ++ +I+Y
Sbjct: 189 LFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYS 248
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I + + L A F++ S D + MI AY + G + +A+ L +R
Sbjct: 249 TIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTMIVAYERAGLVAHAKRLLHELKRP 308
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
P I + G ++ A +AID G
Sbjct: 309 DNIPRDTAIHILAG----AGRIEEATYVFRQAIDAG 340
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 110/221 (49%), Gaps = 20/221 (9%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 207 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAML 266
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S D + + A ++ A+R++ E+KR + D T LA
Sbjct: 267 FQKLRSSGXEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD-TAIHILAG--- 322
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + +D++ ++ +I L Y + N+ EV+ R L FP++
Sbjct: 323 -AGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGY-FPDS 380
Query: 298 ANISYLNMIQVLVN----LKDLPGAEKCFKEW-ESGCATYD 333
++I +++N L++ A + E E GC D
Sbjct: 381 ------DVIAIVLNAYGKLQEFDKANDVYMEMQEVGCVFSD 415
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/289 (18%), Positives = 111/289 (38%), Gaps = 32/289 (11%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +Y +LL Y + +A ++ +M+E+ N ++ +Y + G ++ +
Sbjct: 103 NTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 162
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M+ I P+ +YN +R A + M+R + + T++++ IY +
Sbjct: 163 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN-IEQNVVTYNSMMMIYGK 221
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
EKA ++E+++R + Y +I+++G+ G L +++ LR + I
Sbjct: 222 TLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQIL 281
Query: 302 YLNM-------------------------------IQVLVNLKDLPGAEKCFKEWESGCA 330
+ M I +L + A F++
Sbjct: 282 FQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGE 341
Query: 331 TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 379
DI V MI +K + N E+ ++ R G P++ I + Y
Sbjct: 342 VKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAY 390
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 126/282 (44%), Gaps = 3/282 (1%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
S N +Y L+ C+ ++A LL +M + + + + SL++ K G ++
Sbjct: 83 CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAV 142
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+ M PD YNV + + D+ A R+ EEM G + +T +++L S
Sbjct: 143 DLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFT-YNSLLSG 201
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR-LAFPNT 297
+ G F + + K++ + ++ + L+ + + G++ E +R++ +R L P
Sbjct: 202 FSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPD 261
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
+SY +++ + + A++ +E DI N++I Y+K G L++A +L
Sbjct: 262 V-VSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLF 320
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ G +P+A ++ D R G + A + I G
Sbjct: 321 YEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANG 362
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 100/236 (42%), Gaps = 3/236 (1%)
Query: 151 ELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDIS 210
+++ ++ +N L+ + AK+G + + +M + +P++YTY +R+L
Sbjct: 10 QVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFE 69
Query: 211 GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 270
A V M G + + ++S L + ++A L E+ + ++ Y L
Sbjct: 70 EARSVFRGMAAQG-CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSL 128
Query: 271 ITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGC 329
++ + G L E ++ + + Y +I D+ A + F+E E GC
Sbjct: 129 LSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGC 188
Query: 330 ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 385
+ N ++ ++++G + L + R+G PN T+ D + + GDM
Sbjct: 189 IP-TVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDM 243
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 93/219 (42%), Gaps = 3/219 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
A +L E M ++G TV L ++ ++ F D+ N T+ +LL+
Sbjct: 176 AYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLD 235
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+CK +A L +M+ L + +N+LM G P + +++EM S + P
Sbjct: 236 GFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGP 295
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D +YN+ + + + A ++ E+ + G + D ++S + AG A
Sbjct: 296 DIVSYNILIDGYSKSGALDHAIKLFYEIPKSG-LEPDAFSYSTIIDCLCRAGKVGAAFVV 354
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
K++ + D + L+ + L+E +++++
Sbjct: 355 FKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAM 393
>gi|156070779|gb|ABU45192.1| unknown [Petunia integrifolia subsp. inflata]
Length = 406
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 109/223 (48%), Gaps = 6/223 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS---KNHLTYGSLL 130
ALK+ + M+ G ++ + L + D F ++P + ++YG L+
Sbjct: 119 ALKIYDQMDDLGTPRSAISFNVLLSACVNTKQYDRVRQLFDEMPVKYGFLPDKVSYGILI 178
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
YC+ + EKA L++M+E + +++ F +L+ + K G ++ + EM
Sbjct: 179 RSYCEMGLPEKAMERLKEMEEKGVEITAITFTTLLHAFYKKGMGDEAEKVWNEMVNKGCG 238
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
PD YNV +R + D G + +IEEM G + D +++ L + Y E GL ++A++
Sbjct: 239 PDVGAYNVKIRNIQG-GDPEGVKALIEEMNNAG-LKPDTISYNYLMTCYCENGLMDEAQK 296
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWR-SLRL 292
++LE + + + ++ LI + G Y++++ S+R+
Sbjct: 297 VYEDLETNGCNPNAATFRSLILYLCKKGRFETGYKVFKESVRV 339
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/301 (19%), Positives = 117/301 (38%), Gaps = 17/301 (5%)
Query: 143 EALLEKMKELNLGFSSMPF-NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 201
E+ LE K + + PF +S++ Y G + I +M + ++NV +
Sbjct: 85 ESFLESHKNSS-KITQEPFLSSIIRSYGIAGMFDHALKIYDQMDDLGTPRSAISFNVLLS 143
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 261
A ++ +EM D ++ L Y E GL EKA LKE+E +
Sbjct: 144 ACVNTKQYDRVRQLFDEMPVKYGFLPDKVSYGILIRSYCEMGLPEKAMERLKEMEEKGVE 203
Query: 262 RDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTA--NISYLNMIQVLVNLKDLPG 317
+ L+ + + G E ++W + + P+ N+ N + D G
Sbjct: 204 ITAITFTTLLHAFYKKGMGDEAEKVWNEMVNKGCGPDVGAYNVKIRN-----IQGGDPEG 258
Query: 318 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 377
+ +E + D N ++ Y + G ++ A+++ E G +PNA T+
Sbjct: 259 VKALIEEMNNAGLKPDTISYNYLMTCYCENGLMDEAQKVYEDLETNGCNPNAATFRSLIL 318
Query: 378 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 437
Y + G + ++++ + +P T++ + + + + A+G +K
Sbjct: 319 YLCKKGRFETGYKVFKESVRVNK------MPDFNTLKCLVEGLVKREKLKDAKGMSRTVK 372
Query: 438 K 438
K
Sbjct: 373 K 373
>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 666
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 140/332 (42%), Gaps = 15/332 (4%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+T+ +L+N C E +A AL+ KM L + + +++ K G + ++ +
Sbjct: 227 ITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSK 286
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ + I PD Y+ + L S A+ + EM G +A + T++ + + G
Sbjct: 287 MEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG-IAPNVFTYNCMIDGFCSFG 345
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANIS 301
+ A+R L+++ R + D+ + LI+ + G L E ++ + R FP+T ++
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT--VT 403
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +MI A+ F A+ D+ N +I Y + R++ +L
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 459
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
RRG N T+ + ++ A D ++ I G P + T + F
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG------VCPDTITCNILLYGFC 513
Query: 422 QEKDVDGAEGFLEILKKAVDDLGVEVFEPLIR 453
+ + ++ A E+++ + DL + +I
Sbjct: 514 ENEKLEEALELFEVIQMSKIDLDTVAYNIIIH 545
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/358 (20%), Positives = 142/358 (39%), Gaps = 17/358 (4%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL L ME+ + V + +D + K A+ F ++ E + N TY +++
Sbjct: 280 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 339
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C A+ LL M E + + FN+L++ K G + + EM I P
Sbjct: 340 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 399
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D+ TYN + N A+ + + M + D TF+ + +Y A ++ +
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAKHMFDLM-----ASPDVVTFNTIIDVYCRAKRVDEGMQL 454
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVL 309
L+E+ R + + Y LI + + NL+ +++ + P+T + L +
Sbjct: 455 LREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL--LYGF 512
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
+ L A + F+ + D N++I K +++ A +L G +P+
Sbjct: 513 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 572
Query: 370 KTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVD 427
+T+ + + + A K D G P + T T +R + ++D
Sbjct: 573 QTYNVMISGFCGKSAISDANVLFHKMKDNGHE------PDNSTYNTLIRGCLKAGEID 624
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/363 (20%), Positives = 146/363 (40%), Gaps = 38/363 (10%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP---------------- 117
A++L ME+R + +I +D + K +D A N F ++
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 118 ---------------------ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGF 156
+ S N +T+ L++ + KE +A+ LL++M + +
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 157 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
+++ +NSL+ + K E+ ++ M + PD T+N+ + N I +
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426
Query: 217 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 276
EM G V A+ T++ L + ++G E A++ +E+ +R D+ +Y+ L+
Sbjct: 427 REMSLRG-VIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485
Query: 277 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 336
G L + I+ + + Y+ +I + N + A F D R
Sbjct: 486 NGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARA 545
Query: 337 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 396
N+MI ++ L A+ L + G P+ T+ I +L + D A + +E+
Sbjct: 546 YNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMK 605
Query: 397 DTG 399
+G
Sbjct: 606 SSG 608
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 121/275 (44%), Gaps = 5/275 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TYG +LN CK T A LL KM+E N+ ++ ++ ++ K G + +
Sbjct: 227 NEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLF 286
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYV 240
EM+ D TYN + +++ +M KR +++ + TFS L +V
Sbjct: 287 NEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR--KISPNVVTFSVLIDSFV 344
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
+ G +A++ LKE+ R + Y LI + + L E ++ L ++ +I
Sbjct: 345 KEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMV-DLMISKGCDPDI 403
Query: 301 SYLN-MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
N +I + + F+E + N ++ + + G+LE A++L +
Sbjct: 404 MTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQE 463
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
R P+ +++I D NG+++ A++ K
Sbjct: 464 MVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGK 498
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 117/267 (43%), Gaps = 5/267 (1%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+T +L+N C A L+++M E + + + ++ + K+G ++++
Sbjct: 194 ITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRK 253
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ +I D+ Y++ + L + A + EM+ G AD T++ L + AG
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG-FKADIITYNTLIGGFCNAG 312
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANIS 301
++ + L+++ R ++ + LI + + G L E ++ + + R PNT I+
Sbjct: 313 RWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNT--IT 370
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y ++I L A + S DI N++I Y K R+++ EL
Sbjct: 371 YNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMS 430
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLA 388
RG N T+ + ++G +++A
Sbjct: 431 LRGVIANTVTYNTLVQGFCQSGKLEVA 457
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 125/301 (41%), Gaps = 3/301 (0%)
Query: 76 KLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCY 133
KL +M KR ++ V ++ +D K + A+ ++ + + N +TY SL++ +
Sbjct: 319 KLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGF 378
Query: 134 CKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDS 193
CKE E+A +++ M M FN L+ Y K + + +EM ++ ++
Sbjct: 379 CKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANT 438
Query: 194 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 253
TYN ++ + A+++ +EM RV D ++ L + G EKA
Sbjct: 439 VTYNTLVQGFCQSGKLEVAKKLFQEMVSR-RVRPDIVSYKILLDGLCDNGELEKALEIFG 497
Query: 254 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLK 313
++E D+ Y +I + + + ++ SL L +Y MI L
Sbjct: 498 KIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKD 557
Query: 314 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 373
L A+ F++ D N++I A+ + A EL E + G + T +
Sbjct: 558 SLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVK 617
Query: 374 I 374
+
Sbjct: 618 M 618
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/337 (19%), Positives = 138/337 (40%), Gaps = 9/337 (2%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
T ++NC+C+ A + + K+ +L ++ FN+L+ + ++ M
Sbjct: 125 TLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRM 184
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
P T N + L +S A +I+ M G + T+ + ++ ++G
Sbjct: 185 VEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETG-FQPNEVTYGPVLNVMCKSGQ 243
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
A L+++E RN D Y +I + G+L + ++ + + I+Y
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNT 303
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+I N K ++ + ++ +V+I ++ KEG+L A++L + +RG
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRG 363
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 424
PN T+ D + + ++ A+ ++ I G P T + + +
Sbjct: 364 IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG------CDPDIMTFNILINGYCKAN 417
Query: 425 DV-DGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 460
+ DG E F E+ + V V + L++ + +G+
Sbjct: 418 RIDDGLELFREMSLRGVIANTV-TYNTLVQGFCQSGK 453
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 150/343 (43%), Gaps = 13/343 (3%)
Query: 101 AKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFS- 157
AK ID A + F + + S + +TYG L++ CK + +A+L+ + +N G +
Sbjct: 455 AKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCK--LGRVDDAVLKFNQMINDGVTP 512
Query: 158 -SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
S+ FNSL+ EK + EM + P+ +N M L + A+R+I
Sbjct: 513 NSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLI 572
Query: 217 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 276
+ M+R G V + +++ L + AG ++A + L + + DL +Y L+ Y +
Sbjct: 573 DSMERVG-VRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCK 631
Query: 277 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 336
TG + Y ++R + ++Y ++Q L + + A++ + +DI
Sbjct: 632 TGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYT 691
Query: 337 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 396
N+++ K ++ A ++ + + PN T+ I D + G K A+D
Sbjct: 692 YNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIP 751
Query: 397 DTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 439
G VP+ T M++ QE +D + ++K+
Sbjct: 752 SHG------LVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKS 788
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 109/256 (42%), Gaps = 1/256 (0%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
+ N +TY ++++ CK ++AE +L+ M + + + +++++ K ++
Sbjct: 195 CTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAE 254
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
++Q M + PD TYN + L + AE V++ M G V D T++ +
Sbjct: 255 GVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKG-VKPDVVTYNTIIDG 313
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
+A ++A+ L+ + +++ D+ Y LI Y TG EV R + +
Sbjct: 314 LCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPD 373
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
++Y ++ L A K F ++ + +++ YA G + + +L +
Sbjct: 374 VVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLD 433
Query: 359 RARRRGADPNAKTWEI 374
G PN + I
Sbjct: 434 LMVANGISPNNYIFNI 449
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 122/298 (40%), Gaps = 7/298 (2%)
Query: 79 ENMEKRGMNKTVSDQAIHLDLVAK-VQGIDAAENYFVDLPETSKNHLT-YGSLLNCYCKE 136
E M RG++ V ++ LD + K + +A + ++ + + K ++T YG LL+ Y
Sbjct: 363 EEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAAR 422
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 196
LL+ M + ++ FN ++ YAK ++ I M + PD TY
Sbjct: 423 GAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTY 482
Query: 197 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 256
+ + AL + + A +M DG V + F++L +EKAE E+
Sbjct: 483 GILIDALCKLGRVDDAVLKFNQMINDG-VTPNSVVFNSLVYGLCTVDRWEKAEELFFEMW 541
Query: 257 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI--QVLVNLKD 314
++ ++ + ++ G + R+ S+ ISY +I L D
Sbjct: 542 DQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTD 601
Query: 315 LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
A + S D+ + ++ Y K GR++NA L R+G P A T+
Sbjct: 602 --EAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTY 657
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 103/266 (38%), Gaps = 5/266 (1%)
Query: 122 NHLTYGSLLNCYCK-ELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
N + LLN C + + E + LL +M E + + N+L+ E+ +
Sbjct: 124 NEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALEL 183
Query: 181 IQEMK---ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
+ M + P+ TYN + L + AE V++ M G V D T+S +
Sbjct: 184 LHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKG-VKLDVVTYSTIID 242
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
+A ++AE L+ + ++ D+ Y +I + + + + +
Sbjct: 243 GLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKP 302
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
++Y +I L + + A+ + DI+ N +I Y G +
Sbjct: 303 DVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRL 362
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNG 383
E RG DP+ T+ + DY +NG
Sbjct: 363 EEMYARGLDPDVVTYSLLLDYLCKNG 388
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 137/341 (40%), Gaps = 42/341 (12%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY +++ CK ++A+ L E+MK + S + +NSL+ + G E+ ++
Sbjct: 214 NVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLL 273
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EM + PD T+NV + L + A++++ M G + D T+++L +
Sbjct: 274 DEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESG-IVPDLVTYNSLIEGFCM 332
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G A + ++ D+ +Y LI Y +T + E +++ + L I+
Sbjct: 333 VGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVIT 392
Query: 302 YLNMI------------QVLVNLKDLPG-----------------------AEKCFKEWE 326
Y +++ + L ++ G A K F E +
Sbjct: 393 YDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELK 452
Query: 327 SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 386
S +I N +I K G+LE A EL E+ G +PN T+ I + R G +
Sbjct: 453 SSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVD 512
Query: 387 LAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVD 427
A ++K G P T T MR F + ++
Sbjct: 513 KANVLIQKMEANG------CTPDIITYNTLMRGFYESNKLE 547
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 118/260 (45%), Gaps = 7/260 (2%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S N +TY +L+ C E +A L +M++L + + +L+ TG+
Sbjct: 136 SPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALK 195
Query: 180 IIQEMKAS------SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFS 233
+ QEM + P+ TYN+ + L V A+++ EEMK G + + +++
Sbjct: 196 LHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPS-IISYN 254
Query: 234 NLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 293
+L + AG +E+++R L E+ ++ D+ + LI + G + E ++ + +
Sbjct: 255 SLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIES 314
Query: 294 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
++Y ++I+ + DL A + F S D+ NV+I Y+K ++E A
Sbjct: 315 GIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEA 374
Query: 354 EELKERARRRGADPNAKTWE 373
+L G PN T++
Sbjct: 375 MKLYNEMLLVGKRPNVITYD 394
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 117/284 (41%), Gaps = 24/284 (8%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKM------KELNLGFSSMPFNSLMTLYAKTGHPEKI 177
+TYG+L+ C A L ++M E+N + + +N ++ K G ++
Sbjct: 175 VTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEA 234
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
+ +EMK ++P +YN + ++R+++EM G + D TF+ L
Sbjct: 235 KQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQG-LQPDMVTFNVLID 293
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
+ G +A++ L + DL Y LI + G+L+ ++ S+
Sbjct: 294 TLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEP 353
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEW-----ESGCATYDIRVTNVMIGAYAKEGRLEN 352
ISY +I + A K + E TYD + + + G++++
Sbjct: 354 DVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLA-----GKVDD 408
Query: 353 AEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 396
A++L + G N+ T+ IF D +N DCL +A+
Sbjct: 409 AKKLFSVMKAHGIAENSYTYGIFLDGLCKN-------DCLFEAM 445
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 99/254 (38%), Gaps = 1/254 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY SL+ +C A L M + +N L+ Y+KT E+ + E
Sbjct: 321 VTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNE 380
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M P+ TY+ ++ + + A+++ MK G +T L +
Sbjct: 381 MLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDC 440
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
LFE A + EL++ N ++ LI + G L + ++ L ++Y
Sbjct: 441 LFE-AMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYT 499
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
MI + A ++ E+ T DI N ++ + + +LE +L R ++
Sbjct: 500 IMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQK 559
Query: 364 GADPNAKTWEIFSD 377
P+A T I D
Sbjct: 560 DVSPDAITCSIVVD 573
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/151 (19%), Positives = 67/151 (44%), Gaps = 2/151 (1%)
Query: 56 WEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVD 115
+ G L L + A+KL ++ + + +D + K ++ A F
Sbjct: 426 YTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEK 485
Query: 116 LPETSK--NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGH 173
L N +TY +++ +C+E +KA L++KM+ + +N+LM + ++
Sbjct: 486 LSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNK 545
Query: 174 PEKIPAIIQEMKASSIMPDSYTYNVWMRALA 204
E++ ++ M + PD+ T ++ + L+
Sbjct: 546 LEEVVQLLHRMAQKDVSPDAITCSIVVDMLS 576
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 121/272 (44%), Gaps = 5/272 (1%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S N +TYG+L++ C++ KA L ++M E + + + + L+ + +
Sbjct: 190 SPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAES 249
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+ + M+ S ++P+ YTYN M + + A + +EM DG + + TF L
Sbjct: 250 MFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDG-LLPNVVTFGILIDGL 308
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNT 297
+ A + L ++ + ++ Y LI Y + GNLSE + + P+
Sbjct: 309 CKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDV 368
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
+Y +I+ L + + A+ +E + + N +I Y KEG +E A E+
Sbjct: 369 --FTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVC 426
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 389
+ +G +PN T+ D Y + G M+ A+
Sbjct: 427 SQMTEKGIEPNIITFSTLIDGYCKAGKMEAAM 458
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 107/235 (45%), Gaps = 1/235 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +T+G L++ CK A L M + + +N L+ Y K G+ + ++
Sbjct: 297 NVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLH 356
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
E++ I+PD +TY++ ++ L V+ + A+ +++EMK+ G + + T++ L Y +
Sbjct: 357 SEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFL-PNAVTYNTLIDGYCK 415
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G EKA ++ + ++ + LI Y + G + ++ + + ++
Sbjct: 416 EGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVA 475
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
Y +I + A + KE + ++ + +I K+GR+ +A +L
Sbjct: 476 YTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKL 530
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 59/307 (19%), Positives = 116/307 (37%), Gaps = 13/307 (4%)
Query: 162 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 221
N ++ K G + + + +M A P+ TY + D A R+ +EM
Sbjct: 162 NMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMI- 220
Query: 222 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 281
+ ++ ++ L +AE + + N +L Y ++ Y + ++
Sbjct: 221 EKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVK 280
Query: 282 EVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
+ +++ + PN L I L ++ A K + S +I V N
Sbjct: 281 KALELYQEMLGDGLLPNVVTFGIL--IDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNC 338
Query: 340 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+I Y K G L A L + P+ T+ I M+ A L++ G
Sbjct: 339 LIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKG 398
Query: 400 RGDGGKWVPSSETIRTFMRHFEQEKDVDGA-EGFLEILKKAVDDLGVEVFEPLIRTYAAA 458
++P++ T T + + +E +++ A E ++ +K ++ + F LI Y A
Sbjct: 399 ------FLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEP-NIITFSTLIDGYCKA 451
Query: 459 GRTSPVM 465
G+ M
Sbjct: 452 GKMEAAM 458
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/361 (20%), Positives = 150/361 (41%), Gaps = 15/361 (4%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVA---KVQGIDAAENYFVDL---PETSKNHLTYG 127
AL + M +RG +Q + +++ KV +D A F ++ E + Y
Sbjct: 91 ALDIMREMRERG--GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYN 148
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 187
+L+ YC + + A ++M E + + +N L+ G + +++EM
Sbjct: 149 ALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK 208
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
+ PD +TYN+ + ++ A + E M R G V A T+++L + G ++
Sbjct: 209 GLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRG-VRATVVTYTSLIYALSKKGQVQE 267
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 307
++ E R DL Y LI + +GN+ + I + +++Y +++
Sbjct: 268 TDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMR 327
Query: 308 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
L L + A K E D+ N +I Y+ +G +++A ++ +G +P
Sbjct: 328 GLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNP 387
Query: 368 NAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG-RGDGGKWVPSSETIRTFMRHFEQEKDV 426
T+ +NG A + +++ ++ G D ++ E + T E E+ +
Sbjct: 388 TLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTT-----EDERAI 442
Query: 427 D 427
D
Sbjct: 443 D 443
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 133/336 (39%), Gaps = 26/336 (7%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
T+ +L C +A LL +M N ++ +N+++ + G + I++EM
Sbjct: 43 TFNIMLRHLCSAGKPARALELLRQMPRPN----AVTYNTVIAGFCSRGRVQAALDIMREM 98
Query: 185 KA-SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
+ I P+ YTY + V + A +V +EM G V + ++ L Y + G
Sbjct: 99 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 158
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
+ A + R ++ Y L+ G +E Y + + +Y
Sbjct: 159 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY- 217
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV----MIGAYAKEGRLENAEELKER 359
+L+N G K E + +R T V +I A +K+G+++ ++L +
Sbjct: 218 ---NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDE 274
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
A RRG P+ + + + +G++ A + + G + + P T T MR
Sbjct: 275 AVRRGIRPDLVLYNALINSHSTSGNIDRAFEIM------GEMEKKRIAPDDVTYNTLMRG 328
Query: 420 FEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 455
VD A +K +D++ +P + TY
Sbjct: 329 LCLLGRVDEA-------RKLIDEMTKRGIQPDLVTY 357
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 99/239 (41%), Gaps = 9/239 (3%)
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 196
L + A AL M L L + FN ++ G P + ++++M P++ TY
Sbjct: 20 LPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTY 75
Query: 197 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 256
N + + + A ++ EM+ G +A + T+ + S + + G ++A + E+
Sbjct: 76 NTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEML 135
Query: 257 NRNAHR-DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDL 315
+ + + Y LI Y G L ++R + ++ N++ V D
Sbjct: 136 TKGEVKPEAVMYNALIGGYCDQGKLDTAL-LYRDRMVERGVAMTVATYNLL-VHALFMDG 193
Query: 316 PGAE--KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
G E + +E D+ N++I + KEG ++ A E+ E RRG T+
Sbjct: 194 RGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTY 252
>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
Length = 1014
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 143/326 (43%), Gaps = 5/326 (1%)
Query: 62 LKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS- 120
+ +LR ++L A L+ + GM V +D + K + D A+ F ++
Sbjct: 310 IDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGL 369
Query: 121 -KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
N +TY L++ CK M E A L +KM++ + + P+NSL+ Y K G ++
Sbjct: 370 EPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARG 429
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
++ M + P + +Y+ + L D+S A + EM G +A + TF+ L + +
Sbjct: 430 LLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERG-IAWNNYTFTALINGF 488
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
+ ++A R ++ + N + + +I Y GN+ + ++++ + N
Sbjct: 489 CKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDN 548
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY-DIRVTNVMIGAYAKEGRLENAEELKE 358
+Y ++I L + A + + E+ A + +T ++ G + +EGR L +
Sbjct: 549 YTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLF-REGRFTETYHLWD 607
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGD 384
RG + ++ I L+ D
Sbjct: 608 EMAVRGVKLDLVSFTIIVYAALKQHD 633
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 125/279 (44%), Gaps = 2/279 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N+ T+ +L+N +CK+ ++A L +KM + N+ + + FN ++ Y G+ K +
Sbjct: 477 NNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLY 536
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+M + PD+YTY + L + +S A + +++ V +++ + L ++ E
Sbjct: 537 DQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFRE 596
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G F + E+ R DL ++ ++ + + + ++R ++ +I
Sbjct: 597 -GRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIF 655
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y MI L +++ A C+ + + + V+I K G L +AE L +
Sbjct: 656 YTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEML 715
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 400
PN T+ F DY+ GDM+ A D L A+ G
Sbjct: 716 AGNVLPNKFTYNCFLDYFATEGDMEKAKD-LHSAMLQGH 753
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 69/340 (20%), Positives = 132/340 (38%), Gaps = 17/340 (5%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
Y + + YC+ + A L+ +M+ + S++P+N LM K ++ + M
Sbjct: 200 VYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVM 259
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ D TY + + ++ A R+ +M R G V ++ S + + L
Sbjct: 260 VNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSE-ANCSFMIDELRKKEL 318
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISY 302
E+A +L + ++ AY LI + + R+++ + R PN ++Y
Sbjct: 319 VEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPN--EVTY 376
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+I L + A F + + N +I Y K+G L+ A L +
Sbjct: 377 AILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVK 436
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ 422
G P A ++ RNGD+ A++ + + G W ++ T + F +
Sbjct: 437 EGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIA----W--NNYTFTALINGFCK 490
Query: 423 EKDVDGAEGFLEILKKAVDDLGVE---VFEPLIRTYAAAG 459
+K +D A + K +D + F +I Y G
Sbjct: 491 DKKMDEAA---RLFDKMIDSNVIPNEVTFNVMIEGYCLVG 527
>gi|90399139|emb|CAJ86163.1| H0913C04.4 [Oryza sativa Indica Group]
gi|125550286|gb|EAY96108.1| hypothetical protein OsI_17985 [Oryza sativa Indica Group]
Length = 900
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/405 (19%), Positives = 162/405 (40%), Gaps = 46/405 (11%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL E M+ G+ T+ +I + AK+ +A+N F + +S N + Y ++++
Sbjct: 317 ALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIH 376
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C+ E+AE L+ +M+E + ++S+M Y + K + + +K P
Sbjct: 377 AHCQSGNMERAEELVCEMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKP 436
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+Y + + ++ A + +EM+ G + + T+S L + ++ F A
Sbjct: 437 SIISYGCLLNLYVKIGKVAKALSISKEMESCG-IKHNNKTYSMLINGFIHLHDFANAFAI 495
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
+E+ D + Y LI + + GN+ I ++ +N ++ +I+
Sbjct: 496 FEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIE---- 551
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
YA G +++A + + RR G P T
Sbjct: 552 -------------------------------GYAVAGDMKSALDTLDLMRRSGCVPTVMT 580
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG 431
+ +R ++ AV L+K G P+ T MR + D+ A
Sbjct: 581 YNALIHGLVRKHKVQRAVSVLDKMSIAG------ITPNEHTYTIIMRGYAASGDIGKAFE 634
Query: 432 FLEILKKAVDDLGVEVFEPLIRTYAAAGR--TSPVMLRRLKMEKV 474
+ +K++ L V ++E L+R +GR ++ + R + +K+
Sbjct: 635 YFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKI 679
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/387 (20%), Positives = 158/387 (40%), Gaps = 44/387 (11%)
Query: 108 AAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTL 167
A + F +P+ S+ +G ++ Y K A A E M+ + ++ F SL+
Sbjct: 250 AVVSAFERIPKPSRRE--FGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHA 307
Query: 168 YAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAA 227
YA + ++EMK+ + TY++ + A +ND A+ + +E K +
Sbjct: 308 YAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTK-LSSL 366
Query: 228 DWTTFSNLASIYVEAGLFEKAERALKELEN--------------------RNAHRDLS-- 265
+ +SN+ + ++G E+AE + E+E +N ++ L
Sbjct: 367 NGIIYSNIIHAHCQSGNMERAEELVCEMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVF 426
Query: 266 -------------AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNL 312
+Y L+ LY + G +++ I + + N +Y +I ++L
Sbjct: 427 ERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHL 486
Query: 313 KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
D A F+E D + N++I A+ K G ++ A + E+ ++ P+ + +
Sbjct: 487 HDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAF 546
Query: 373 EIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGF 432
+ Y GDMK A+D L+ +G VP+ T + ++ V A
Sbjct: 547 RPIIEGYAVAGDMKSALDTLDLMRRSG------CVPTVMTYNALIHGLVRKHKVQRAVSV 600
Query: 433 LEILKKAVDDLGVEVFEPLIRTYAAAG 459
L+ + A + ++R YAA+G
Sbjct: 601 LDKMSIAGITPNEHTYTIIMRGYAASG 627
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 138/337 (40%), Gaps = 56/337 (16%)
Query: 74 ALKLSENMEKRGM---NKTVS---DQAIHLDLVAKVQGIDAAENYFVDLPETSKNHL--- 124
AL +S+ ME G+ NKT S + IHL A N F E ++ L
Sbjct: 457 ALSISKEMESCGIKHNNKTYSMLINGFIHLHDFA---------NAFAIFEEMLRSGLQPD 507
Query: 125 --TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQ 182
Y L+ +CK ++A +LEKM++ + S+ F ++ YA G + +
Sbjct: 508 RAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLD 567
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
M+ S +P TYN + L + + A V+++M G + + T++ + Y +
Sbjct: 568 LMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAG-ITPNEHTYTIIMRGYAAS 626
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY 302
G KA +++ D+ Y+ L+ ++G + + R +
Sbjct: 627 GDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREM------------ 674
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+ + +P + + N++I +A+ G + AE+L ++ +
Sbjct: 675 --------SFQKIP---------------RNTFIYNILIDGWARRGDVWEAEDLMKQMKE 711
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
G PN T+ + + + GDM+ A +E+ +D G
Sbjct: 712 DGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVG 748
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 88/192 (45%), Gaps = 1/192 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
+ N TY ++ Y KA K+KE L + +L+ K+G + A
Sbjct: 610 TPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALA 669
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+ +EM I +++ YN+ + A D+ AE ++++MK DG V + T+++ +
Sbjct: 670 VTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDG-VPPNIHTYTSYINAC 728
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
+AG ++AE+ ++E+ + ++ Y LI + + + + ++LA
Sbjct: 729 CKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDE 788
Query: 300 ISYLNMIQVLVN 311
SY ++ L++
Sbjct: 789 ASYHCLVTSLLS 800
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 91/201 (45%), Gaps = 3/201 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK--NHLTYGSLLN 131
A+ + + M G+ I + A I A YF + E+ + Y +LL
Sbjct: 597 AVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLR 656
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK + A A+ +M + ++ +N L+ +A+ G + ++++MK + P
Sbjct: 657 ACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPP 716
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ +TY ++ A D+ AE+VIEEM G + + T++ L + L ++A +
Sbjct: 717 NIHTYTSYINACCKAGDMQRAEKVIEEMVDVG-LKPNVKTYTTLIKGWARVSLPDRALKC 775
Query: 252 LKELENRNAHRDLSAYQFLIT 272
+E++ D ++Y L+T
Sbjct: 776 FEEMKLAGLKPDEASYHCLVT 796
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 76/170 (44%), Gaps = 13/170 (7%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL ++ M + + + I +D A+ + AE+ + E N TY S +N
Sbjct: 667 ALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYIN 726
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK ++AE ++E+M ++ L + + +L+ +A+ P++ +EMK + + P
Sbjct: 727 ACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKP 786
Query: 192 DSYTYNVWMRALAAVNDI------SGAERVIEEMKR-----DGRVAADWT 230
D +Y+ + +L + + +G V EM D R A W+
Sbjct: 787 DEASYHCLVTSLLSRATVMEGSTYTGIISVCREMSENDLTVDLRTAVHWS 836
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/380 (20%), Positives = 164/380 (43%), Gaps = 13/380 (3%)
Query: 115 DLPETSKNHLTYGSLLNCYCKELMTEKA-EALLEKMKELNLGFSSMPFNSLMTLYAKTGH 173
D + + +TY +++N +CK+ ++A E L E + + + + S++ + G
Sbjct: 69 DGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGK 128
Query: 174 PEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFS 233
++ +++EMK + PD +T++ + + A ++ +E+ D T++
Sbjct: 129 MDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYT 188
Query: 234 NLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--R 291
L + ++G EKA + L +E R ++ Y L+ + G+L + ++R + +
Sbjct: 189 ALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSK 248
Query: 292 LAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLE 351
PN ++Y +I L + A E + C D N ++ Y + GR+E
Sbjct: 249 GCVPNV--VTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIE 306
Query: 352 NAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSE 411
A++L + + P+ T+ + ++ A LE + T G V S
Sbjct: 307 EAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLEN-MKTAAGIDPDVVTYSI 365
Query: 412 TIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVM--LRRL 469
+ + R ++ V+ AE E++ + V V + LI AGR M L+ +
Sbjct: 366 VVAGYSR---AKRFVEAAEFIQEMIARNVAPNAV-TYSSLIDGLCKAGRVDHAMEVLKNM 421
Query: 470 KMEKVEVSEAS-KKLLEAIC 488
++VE S + ++ A+C
Sbjct: 422 VNKRVEPSVGTFNSVIGALC 441
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 128/297 (43%), Gaps = 16/297 (5%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK----NHLTYGSL 129
A+K+ ME R V + L + K +D A + F + TSK N +TY +L
Sbjct: 203 AMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRM--TSKGCVPNVVTYTTL 260
Query: 130 LNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
++ C + A L+++M ++ +N+L+ Y + G E+ + +EM S
Sbjct: 261 IHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSC 320
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
+PD TY +R + + A ++E MK + D T+S + + Y A F +A
Sbjct: 321 LPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAA 380
Query: 250 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 309
++E+ RN + Y LI + G + + +++ + ++ ++I L
Sbjct: 381 EFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGAL 440
Query: 310 VNLKDLPGAEKCF-----KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
L D+ A K E G TY ++ +++ GR+E A EL E R
Sbjct: 441 CRLGDMDEAWKLLVAMAAHGLEPGMVTY-----TTLLEGFSRTGRMEIAYELFEVMR 492
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 166/383 (43%), Gaps = 24/383 (6%)
Query: 89 TVSDQAIHLDLVAKVQGIDAAENYFVDLPE-TSKNHLTYGSLLNCYCKELMTEKAEALLE 147
TV I +D K + A F + E + N TY ++N CK +T KA +L+
Sbjct: 6 TVVTWTIIIDGFCKANQLKQALACFEKMREFVAPNERTYNVVVNGLCKARLTSKAYEVLK 65
Query: 148 KMKELNLGFSSMP----FNSLMTLYAKTGHPEKIPAIIQEMKA-SSIMPDSYTYNVWMRA 202
+M++ G S P +++++ + K G ++ I++EM I PD TY +
Sbjct: 66 EMRD---GKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDG 122
Query: 203 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 262
L + A ++ EMK G V D TFS L + + A ++A + KE+ ++ +
Sbjct: 123 LCRDGKMDRACEMVREMKLKG-VEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWK 181
Query: 263 -DLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAE 319
D+ Y LI + ++GNL + ++ + R PN ++Y +++ L DL A
Sbjct: 182 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNV--VTYSSLLHGLCKAGDLDQAL 239
Query: 320 KCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 378
F+ S GC + T ++ G A +++ A L + P+ ++ D
Sbjct: 240 DLFRRMTSKGCVPNVVTYTTLIHGLCAAH-KVDAARLLMDEMTATCCPPDTVSYNALLDG 298
Query: 379 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 438
Y R G ++ A L K + T +P T +R F ++ A LE +K
Sbjct: 299 YCRLGRIEEAKQ-LFKEMAT-----KSCLPDRITYTCLVRGFCNASRLEEARFLLENMKT 352
Query: 439 AVD-DLGVEVFEPLIRTYAAAGR 460
A D V + ++ Y+ A R
Sbjct: 353 AAGIDPDVVTYSIVVAGYSRAKR 375
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 114/265 (43%), Gaps = 6/265 (2%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +L++ +CK EKA +L M+ + + ++SL+ K G ++ + +
Sbjct: 185 VTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRR 244
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + +P+ TY + L A + + A +++EM D +++ L Y G
Sbjct: 245 MTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATC-CPPDTVSYNALLDGYCRLG 303
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF---PNTANI 300
E+A++ KE+ ++ D Y L+ + L E + +++ A P+ +
Sbjct: 304 RIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDV--V 361
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
+Y ++ K A + +E + + + +I K GR+++A E+ +
Sbjct: 362 TYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNM 421
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDM 385
+ +P+ T+ R GDM
Sbjct: 422 VNKRVEPSVGTFNSVIGALCRLGDM 446
>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
Length = 428
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 139/330 (42%), Gaps = 6/330 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL+L M G + +V +D + K +DAA+ + + + N +TY +L++
Sbjct: 29 ALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALID 88
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE-MKASSIM 190
CK A +++M + +NSL+ + ++QE M S +
Sbjct: 89 GLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRI 148
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
PD TYN ++ L + ++EEM R G ++ D TF ++ S +A + A +
Sbjct: 149 PDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGG-ISPDVVTFCSIISGLCKANRIDDAFQ 207
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
K + R D Y ++ + L V + + + + +Y +I L+
Sbjct: 208 VFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALI 267
Query: 311 NLKDLPGAEKCFKE-WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
D+ A +++ E+GC ++ N IGA + G+ A+ + G+ PN
Sbjct: 268 RAGDIESASWAYEQAMEAGC-VMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNL 326
Query: 370 KTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
++ D ++G++ A K +D+G
Sbjct: 327 LSYNFVIDGLCKSGNVDDAWKLSRKMLDSG 356
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 156/363 (42%), Gaps = 19/363 (5%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +L++ CK + A+ALL+KM + + + + +L+ K P ++
Sbjct: 46 VTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKR 105
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE-MKRDGRVAADWTTFSNLASIYVEA 242
M S PD TYN + L N + A V++E M GR+ D T++ S +A
Sbjct: 106 MLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRI-PDVVTYNTFISGLCKA 164
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANI 300
G +K L+E++ D+ + +I+ + + + +++++ + R P++ +
Sbjct: 165 GKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDS--L 222
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNV-MIGAYAKEGRLENAEELKE 358
+Y M+ L L E+ + +SG Y + T +I A + G +E+A E
Sbjct: 223 TYSIMLDNLSRANRLDTVEEVLEHMVKSG--HYALSATYAPLIHALIRAGDIESASWAYE 280
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 418
+A G T F R+G LA + L I++G +P+ + +
Sbjct: 281 QAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGS------LPNLLSYNFVID 334
Query: 419 HFEQEKDVDGAEGFL-EILKKAVDDLGVEVFEPLIRTYAAAGRTSPV--MLRRLKMEKVE 475
+ +VD A ++L V F LI + AGR S +L+ +K + +
Sbjct: 335 GLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNIC 394
Query: 476 VSE 478
V +
Sbjct: 395 VPD 397
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 62/121 (51%), Gaps = 8/121 (6%)
Query: 109 AENYFVDLPETSK--NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSS---MPFNS 163
A+N + + E+ N L+Y +++ CK + A L KM L+ G + FN+
Sbjct: 310 AKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKM--LDSGCCKPDVIFFNT 367
Query: 164 LMTLYAKTGHPEKIPAIIQEMKASSI-MPDSYTYNVWMRALAAVNDISGAERVIEEMKRD 222
L++ + K G + +++EMKA +I +PD TYN + + + A+ ++EEM+
Sbjct: 368 LISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQAV 427
Query: 223 G 223
G
Sbjct: 428 G 428
>gi|145335386|ref|NP_172560.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242678|sp|Q0WVV0.1|PPR31_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g10910, chloroplastic; Flags: Precursor
gi|110741600|dbj|BAE98748.1| membrane-associated salt-inducible protein isolog [Arabidopsis
thaliana]
gi|332190541|gb|AEE28662.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 664
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 118/259 (45%), Gaps = 2/259 (0%)
Query: 124 LTYGSLL-NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQ 182
+TY +LL C + KA L+ ++ + S+ + +++ + A G E+ IQ
Sbjct: 202 VTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQ 261
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
+MK P+ Y Y+ + + + D A+ ++ EMK G V + + L +Y++
Sbjct: 262 QMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVP-NKVMMTTLLKVYIKG 320
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY 302
GLF+++ L ELE+ + Y L+ + G L E I+ ++ + +
Sbjct: 321 GLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYAN 380
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
MI L K A++ ++ E+ D+ + N M+ AY + G +E+ + ++
Sbjct: 381 SIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDE 440
Query: 363 RGADPNAKTWEIFSDYYLR 381
+ P+ T+ I Y+++
Sbjct: 441 QAVSPDYNTFHILIKYFIK 459
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 86/184 (46%), Gaps = 3/184 (1%)
Query: 109 AENYF--VDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMT 166
AEN+ + + S N Y SLLN Y + +KA+ L+ +MK + L + + +L+
Sbjct: 256 AENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLK 315
Query: 167 LYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA 226
+Y K G ++ ++ E++++ + Y + M L+ + A + ++MK G V
Sbjct: 316 VYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKG-VR 374
Query: 227 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
+D S + S + F++A+ ++ E DL ++ Y + G + V R+
Sbjct: 375 SDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRM 434
Query: 287 WRSL 290
+ +
Sbjct: 435 MKKM 438
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 10/209 (4%)
Query: 162 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV-NDISGAERVIEEMK 220
NS+++ K G + + +MK + PD TYN + V N A +I E+
Sbjct: 170 NSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELP 229
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
+G + D + + +I G E+AE +++++ ++ Y L+ Y G+
Sbjct: 230 HNG-IQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDY 288
Query: 281 ---SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES-GCATYDIRV 336
E+ +S+ L PN ++ L + + L D + + E ES G A ++
Sbjct: 289 KKADELMTEMKSIGLV-PNKVMMTTLLKVYIKGGLFD--RSRELLSELESAGYAENEMPY 345
Query: 337 TNVMIGAYAKEGRLENAEELKERARRRGA 365
+M G +K G+LE A + + + +G
Sbjct: 346 CMLMDG-LSKAGKLEEARSIFDDMKGKGV 373
>gi|357166784|ref|XP_003580849.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Brachypodium distachyon]
Length = 904
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 150/346 (43%), Gaps = 11/346 (3%)
Query: 108 AAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTL 167
A + F +P+ S+ +G ++ Y K A A E M+ + ++ F SL+
Sbjct: 256 AVVSAFERIPKPSRRE--FGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHA 313
Query: 168 YAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK-RDGRVA 226
YA + + ++EMKA I TY++ + A +ND A+ + +E K + G +
Sbjct: 314 YAVARDMRGVLSCVEEMKAEGIELTIVTYSIIIAGFAKINDAQSADNLFKEAKAKLGDL- 372
Query: 227 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
+ +SN+ + ++G ++AE ++E+E + AY ++ Y + + +
Sbjct: 373 -NGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIV 431
Query: 287 WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAK 346
+ L+ + ISY +I + + + + A KE ES ++ + +++I +
Sbjct: 432 FERLKECCFTPSIISYGCLINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIH 491
Query: 347 EGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKW 406
NA + E + G P+ + + + + + G+M A+ LEK +
Sbjct: 492 LHDFANAFSIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKM------QKERM 545
Query: 407 VPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLI 452
PS+ R + F D+ A L++++++ V + LI
Sbjct: 546 QPSNRAFRPIIEGFAVAGDMKRALNILDLMRRSGCAPTVMTYNALI 591
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 137/328 (41%), Gaps = 5/328 (1%)
Query: 75 LKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLNC 132
L E M+ G+ T+ +I + AK+ +A+N F + N + Y ++++
Sbjct: 324 LSCVEEMKAEGIELTIVTYSIIIAGFAKINDAQSADNLFKEAKAKLGDLNGIIYSNIIHA 383
Query: 133 YCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPD 192
+C+ ++AE L+ +M+E + ++S+M Y +K + + +K P
Sbjct: 384 HCQSGNMDRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPS 443
Query: 193 SYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERAL 252
+Y + + ++ A + +EM+ G + + T+S L S ++ F A
Sbjct: 444 IISYGCLINLYIKIGKVTKAIAISKEMESYG-IKHNNKTYSMLISGFIHLHDFANAFSIF 502
Query: 253 KELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNL 312
+E+ D + Y LI + + GN+ RI ++ +N ++ +I+
Sbjct: 503 EEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVA 562
Query: 313 KDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
D+ A SGCA + N +I K+ ++E A + + G PN T
Sbjct: 563 GDMKRALNILDLMRRSGCAP-TVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHT 621
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ I Y NGD+ A + K + G
Sbjct: 622 YTIIMRGYAANGDIGKAFEYFTKIKEGG 649
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/278 (18%), Positives = 118/278 (42%), Gaps = 1/278 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N+ TY L++ + A ++ E+M + L +N L+ + K G+ ++ I+
Sbjct: 478 NNKTYSMLISGFIHLHDFANAFSIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRIL 537
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
++M+ + P + + + A D+ A +++ M+R G A T++ L ++
Sbjct: 538 EKMQKERMQPSNRAFRPIIEGFAVAGDMKRALNILDLMRRSG-CAPTVMTYNALIHGLIK 596
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
E+A L ++ + Y ++ Y G++ + + + ++
Sbjct: 597 KNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAANGDIGKAFEYFTKIKEGGLKLDVYI 656
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +++ + A +E + + V N++I +A+ G + A +L ++ +
Sbjct: 657 YETLLRACCKSGRMQSALAVTREMSTQKIARNTFVYNILIDGWARRGDVWEAADLMKQMK 716
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
G PN T+ + + + GDM+ A +E+ D G
Sbjct: 717 EDGVPPNIHTYTSYINACCKAGDMQRAQKVIEEMADVG 754
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 76/147 (51%), Gaps = 1/147 (0%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y +LL CK + A A+ +M + ++ +N L+ +A+ G + ++++MK
Sbjct: 657 YETLLRACCKSGRMQSALAVTREMSTQKIARNTFVYNILIDGWARRGDVWEAADLMKQMK 716
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
+ P+ +TY ++ A D+ A++VIEEM G + + T++ L + +A L
Sbjct: 717 EDGVPPNIHTYTSYINACCKAGDMQRAQKVIEEMADVG-LKPNLKTYTTLIKGWAKASLP 775
Query: 246 EKAERALKELENRNAHRDLSAYQFLIT 272
++A ++ +E++ D +AY L+T
Sbjct: 776 DRALKSFEEMKLAGLKPDEAAYHCLVT 802
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 87/192 (45%), Gaps = 1/192 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
+ N TY ++ Y KA K+KE L + +L+ K+G + A
Sbjct: 616 TPNEHTYTIIMRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALA 675
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+ +EM I +++ YN+ + A D+ A ++++MK DG V + T+++ +
Sbjct: 676 VTREMSTQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDG-VPPNIHTYTSYINAC 734
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
+AG ++A++ ++E+ + +L Y LI + + + + ++LA
Sbjct: 735 CKAGDMQRAQKVIEEMADVGLKPNLKTYTTLIKGWAKASLPDRALKSFEEMKLAGLKPDE 794
Query: 300 ISYLNMIQVLVN 311
+Y ++ L++
Sbjct: 795 AAYHCLVTSLLS 806
>gi|356513139|ref|XP_003525271.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 621
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 127/264 (48%), Gaps = 6/264 (2%)
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM-KA 186
+++N + ++A + +KMKE ++ +N+L+ + G P + +++ M +
Sbjct: 135 AMINAFSDSGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIVGRPYESMKLLEMMGQD 194
Query: 187 SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE 246
++ P+ TYN+ ++A + A V+ +M G + D T++ +A Y + G E
Sbjct: 195 ENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASG-IQPDVVTYNTMARAYAQNGETE 253
Query: 247 KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR-IWRSLRLAF-PNTANISYLN 304
KAER + +++ + +I+ Y + GN++E R ++R L PN + + +
Sbjct: 254 KAERLILKMQYNKVKPNERTCGIIISGYCKEGNMTEALRFLYRMKELGVHPNP--VVFNS 311
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+I+ ++ D G ++ E D+ + ++ A++ G ++N EE+ + G
Sbjct: 312 LIKGYLDATDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIFNDMVKAG 371
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLA 388
+P+ + I + Y+R G + A
Sbjct: 372 IEPDIHAYSILAKGYVRAGQPRKA 395
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 100/258 (38%), Gaps = 36/258 (13%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N T G +++ YCKE +A L +MKEL + + + FNSL+ Y + +
Sbjct: 270 NERTCGIIISGYCKEGNMTEALRFLYRMKELGVHPNPVVFNSLIKGYLDATDTNGVDEAL 329
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M+ I PD T++ M A ++ + E + +M + G + D +S LA YV
Sbjct: 330 TLMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIFNDMVKAG-IEPDIHAYSILAKGYVR 388
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
AG KAE L + ++ + +I+ + G + + +
Sbjct: 389 AGQPRKAESLLTSMSKYGVQTNVVIFTTIISGWCAAGKMDRAFSL--------------- 433
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
C K E G + +++ +I Y + + AEE+
Sbjct: 434 -------------------CEKMHEMGTSP-NLKTYETLIWGYGEAKQPWKAEEILSTME 473
Query: 362 RRGADPNAKTWEIFSDYY 379
RG P T ++ +D +
Sbjct: 474 ERGVVPEMSTMQLVADAW 491
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 103/254 (40%), Gaps = 1/254 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N TY L+ +C + E+A +L KM + + +N++ YA+ G EK +I
Sbjct: 200 NDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETEKAERLI 259
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+M+ + + P+ T + + +++ A R + MK G V + F++L Y++
Sbjct: 260 LKMQYNKVKPNERTCGIIISGYCKEGNMTEALRFLYRMKELG-VHPNPVVFNSLIKGYLD 318
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
A + AL +E D+ + ++ + G + I+ + A +
Sbjct: 319 ATDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIFNDMVKAGIEPDIHA 378
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y + + V AE ++ + +I + G+++ A L E+
Sbjct: 379 YSILAKGYVRAGQPRKAESLLTSMSKYGVQTNVVIFTTIISGWCAAGKMDRAFSLCEKMH 438
Query: 362 RRGADPNAKTWEIF 375
G PN KT+E
Sbjct: 439 EMGTSPNLKTYETL 452
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/316 (19%), Positives = 124/316 (39%), Gaps = 33/316 (10%)
Query: 162 NSLMTLYAKT---------GHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA 212
NS T++A+T G P + A+ + P TY + AL
Sbjct: 55 NSCQTVHARTKLMNALIGKGKPHEAQAVFHNLTEEGHKPTLITYTTLVAALTRQKRFKSI 114
Query: 213 ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLIT 272
++ ++ +G + D + + + + ++G ++A + ++++ S Y LI
Sbjct: 115 PALLSKVADNG-MKPDSILLNAMINAFSDSGKVDEAMKIFQKMKEYGCKPTTSTYNTLIK 173
Query: 273 LYGQTGNLSEVYRIWRSLRL---------AFPNTANISYLNMIQVLVNLKDLPGAEKCFK 323
+G G R + S++L PN + +Y +IQ K L A
Sbjct: 174 GFGIVG------RPYESMKLLEMMGQDENVKPN--DRTYNILIQAWCTKKKLEEAWNVLH 225
Query: 324 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
+ + D+ N M AYA+ G E AE L + + PN +T I Y + G
Sbjct: 226 KMVASGIQPDVVTYNTMARAYAQNGETEKAERLILKMQYNKVKPNERTCGIIISGYCKEG 285
Query: 384 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDL 443
+M A+ L + + G P+ + ++ + D +G + L ++++
Sbjct: 286 NMTEALRFLYRMKELGVH------PNPVVFNSLIKGYLDATDTNGVDEALTLMEEFGIKP 339
Query: 444 GVEVFEPLIRTYAAAG 459
V F ++ +++AG
Sbjct: 340 DVVTFSTIMNAWSSAG 355
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/336 (18%), Positives = 130/336 (38%), Gaps = 14/336 (4%)
Query: 129 LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS 188
L+N + +A+A+ + E + + + +L+ + + IPA++ ++ +
Sbjct: 66 LMNALIGKGKPHEAQAVFHNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNG 125
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
+ PDS N + A + + A ++ ++MK G +T++ L + G+ +
Sbjct: 126 MKPDSILLNAMINAFSDSGKVDEAMKIFQKMKEYG-CKPTTSTYNTLIKGF---GIVGRP 181
Query: 249 ERALKELE----NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
++K LE + N + Y LI + L E + + + + ++Y
Sbjct: 182 YESMKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNT 241
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
M + + AE+ + + + R ++I Y KEG + A R + G
Sbjct: 242 MARAYAQNGETEKAERLILKMQYNKVKPNERTCGIIISGYCKEGNMTEALRFLYRMKELG 301
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 424
PN + YL D + +++A+ G K P T T M +
Sbjct: 302 VHPNPVVFNSLIKGYLDATD----TNGVDEALTLMEEFGIK--PDVVTFSTIMNAWSSAG 355
Query: 425 DVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 460
+D E + KA + + + L + Y AG+
Sbjct: 356 LMDNCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQ 391
>gi|225425981|ref|XP_002269531.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Vitis vinifera]
Length = 603
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/332 (19%), Positives = 149/332 (44%), Gaps = 10/332 (3%)
Query: 72 YPALKLSENMEKRGMNKTVSDQAIHLDLV---AKVQGIDAAENYFVDLPETS--KNHLTY 126
+ AL+ +M K+G+ + D A++ L+ A ++ + AE F + E ++ +
Sbjct: 276 FEALEFFRDMTKKGI---LEDSAVYSSLICSFASIREVKVAEELFREAEEKKILRDPEVF 332
Query: 127 GSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKA 186
L+ Y +E + E+ +++ MK + + S F +++ +AK + E+
Sbjct: 333 LKLVLMYVEEGLMERTLEIVKAMKNVEIRVSDCIFCAIVNGFAKKRGLRAAAKVYDELIL 392
Query: 187 SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE 246
P TY + + S AE V EM++ G +S++ +Y + G
Sbjct: 393 QGCEPGQVTYASIINVYCRMELYSKAEMVFSEMEKKG-FNKCVVAYSSMVVMYGKTGRLR 451
Query: 247 KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI 306
+A R + +++ R ++ Y L+ ++G+ NL +V ++W+ ++ +SY ++I
Sbjct: 452 EAMRLVAKMKERGCEPNVWVYNSLMDMHGRVKNLRQVEKLWKEMKRKKVVPDRVSYTSVI 511
Query: 307 QVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD 366
D + + E+ D + +M+G ++K GR++ +L + + G
Sbjct: 512 SAYSKAGDFETCMRFYHEFRMNGGVIDRVIAGIMVGIFSKSGRVDELVKLLQDMKTEGTG 571
Query: 367 PNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 398
+ + + + LR+ +++ L+++ DT
Sbjct: 572 LDERLYRSALN-ALRDAGLQMQARWLQESFDT 602
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 146/354 (41%), Gaps = 15/354 (4%)
Query: 56 WEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKV----QGIDAAEN 111
+ + + K+RD Y + L + E R ++ + I+ L + + +A E
Sbjct: 225 YRIMEAYIKIRD---YEKVVTLFQEFESRKIDSSPFSTQIYRILCESLGKMGRAFEALE- 280
Query: 112 YFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYA 169
+F D+ + ++ Y SL+ + + AE L + +E + F L+ +Y
Sbjct: 281 FFRDMTKKGILEDSAVYSSLICSFASIREVKVAEELFREAEEKKILRDPEVFLKLVLMYV 340
Query: 170 KTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADW 229
+ G E+ I++ MK I + + A + A +V +E+ G
Sbjct: 341 EEGLMERTLEIVKAMKNVEIRVSDCIFCAIVNGFAKKRGLRAAAKVYDELILQG-CEPGQ 399
Query: 230 TTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS 289
T++++ ++Y L+ KAE E+E + ++ + AY ++ +YG+TG L E R+
Sbjct: 400 VTYASIINVYCRMELYSKAEMVFSEMEKKGFNKCVVAYSSMVVMYGKTGRLREAMRLVAK 459
Query: 290 L--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKE 347
+ R PN Y +++ + +K+L EK +KE + D +I AY+K
Sbjct: 460 MKERGCEPNVW--VYNSLMDMHGRVKNLRQVEKLWKEMKRKKVVPDRVSYTSVISAYSKA 517
Query: 348 GRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRG 401
G E R G + I + ++G + V L+ G G
Sbjct: 518 GDFETCMRFYHEFRMNGGVIDRVIAGIMVGIFSKSGRVDELVKLLQDMKTEGTG 571
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/301 (20%), Positives = 115/301 (38%), Gaps = 39/301 (12%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
L + S + Y K M A+ ++MK + +S + +M Y K EK+ + QE
Sbjct: 187 LVFNSAMGGYNKLHMFSSTIAVYDRMKSAGVVPNSESYYRIMEAYIKIRDYEKVVTLFQE 246
Query: 184 --------------------------------------MKASSIMPDSYTYNVWMRALAA 205
M I+ DS Y+ + + A+
Sbjct: 247 FESRKIDSSPFSTQIYRILCESLGKMGRAFEALEFFRDMTKKGILEDSAVYSSLICSFAS 306
Query: 206 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 265
+ ++ AE + E + + ++ D F L +YVE GL E+ +K ++N
Sbjct: 307 IREVKVAEELFREAE-EKKILRDPEVFLKLVLMYVEEGLMERTLEIVKAMKNVEIRVSDC 365
Query: 266 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 325
+ ++ + + L +++ L L ++Y ++I V ++ AE F E
Sbjct: 366 IFCAIVNGFAKKRGLRAAAKVYDELILQGCEPGQVTYASIINVYCRMELYSKAEMVFSEM 425
Query: 326 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 385
E + + M+ Y K GRL A L + + RG +PN + D + R ++
Sbjct: 426 EKKGFNKCVVAYSSMVVMYGKTGRLREAMRLVAKMKERGCEPNVWVYNSLMDMHGRVKNL 485
Query: 386 K 386
+
Sbjct: 486 R 486
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 149/345 (43%), Gaps = 18/345 (5%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMP----FNSLMTLYAKTGHPEKIPA 179
+Y +LL C E +++A LL M + + G S P +N+++ + K G +K +
Sbjct: 164 FSYNNLLKGLCDENRSQEALELLHMMAD-DRGGGSPPDVVSYNTVLNGFFKEGDSDKAYS 222
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
EM I+PD TY+ + AL + A V+ M ++G V D T++++ Y
Sbjct: 223 TYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNG-VMPDCMTYNSILHGY 281
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNT 297
+G ++A LK++ + ++ Y L+ + G +E +I+ S+ R P+
Sbjct: 282 CSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDI 341
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
A +Y ++Q L D V N++I AYAK+ +++ A +
Sbjct: 342 A--TYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVF 399
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 417
+ R+ G +PN + D ++G + A+ E+ ID G P+ + +
Sbjct: 400 SKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEG------LTPNIIVYTSLI 453
Query: 418 RHFEQEKDVDGAEGF-LEILKKAVDDLGVEVFEPLIRTYAAAGRT 461
D AE LE+L + + L F +I ++ GR
Sbjct: 454 HGLCTCDKWDKAEELILEMLDRGI-CLNTIFFNSIIDSHCKEGRV 497
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 138/320 (43%), Gaps = 13/320 (4%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A+ + M + G+N V +D++ K +D A YF + + + N + Y SL++
Sbjct: 395 AMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIH 454
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C +KAE L+ +M + + +++ FNS++ + K G + + M + P
Sbjct: 455 GLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 514
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D TYN + + A +++ M G V D T+ L + Y + A
Sbjct: 515 DIITYNTLIDGCCLAGKMDEATKLLASMVSVG-VKPDIVTYGTLINGYCRVSRMDDALAL 573
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV- 310
KE+ + ++ Y ++ T + ++ S+ + +Y ++ L
Sbjct: 574 FKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCK 633
Query: 311 -NLKDLPGAEKCFKEWESGCAT---YDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD 366
NL D + + +++ C T + R N+MIGA K GR++ A++L G
Sbjct: 634 NNLTD-----EALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLV 688
Query: 367 PNAKTWEIFSDYYLRNGDMK 386
P+ +T+ + ++ + G ++
Sbjct: 689 PDVRTYSLMAENLIEQGSLE 708
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 107/278 (38%), Gaps = 36/278 (12%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY SL+N CK + +A + + M + L + +L+ YA G ++ A++
Sbjct: 305 NVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALL 364
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M + I PD + +N+ + A A + A V +M++ G + + + + + +
Sbjct: 365 DLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHG-LNPNVVCYGTVIDVLCK 423
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
+G + A +++ + G T N+ I
Sbjct: 424 SGSVDDAMLYFEQMIDE----------------GLTPNI-------------------IV 448
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y ++I L AE+ E + N +I ++ KEGR+ +E+L +
Sbjct: 449 YTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMV 508
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
R G P+ T+ D G M A L + G
Sbjct: 509 RIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVG 546
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/352 (19%), Positives = 129/352 (36%), Gaps = 44/352 (12%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLM-TLYAKTGHPEKIPAIIQE 183
TY L+ C C+ + A L + + ++ F L+ L A + + +++
Sbjct: 94 TYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRR 153
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM--KRDGRVAADWTTFSNLASIYVE 241
M +PD ++YN ++ L N A ++ M R G D +++ + + + +
Sbjct: 154 MTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFK 213
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G +KA E+ +R D+ Y +I + + +
Sbjct: 214 EGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKA------------------ 255
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
+ ++ +V +P C TY N ++ Y G+ + A ++ R
Sbjct: 256 -MEVLNTMVKNGVMP-----------DCMTY-----NSILHGYCSSGQPKEAIGTLKKMR 298
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
G +PN T+ +Y +NG A + T RG P T RT ++ +
Sbjct: 299 SDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSM--TKRG----LEPDIATYRTLLQGYA 352
Query: 422 QEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEK 473
+ + L+++ + VF LI YA + ML KM +
Sbjct: 353 TKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQ 404
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 42/232 (18%), Positives = 97/232 (41%), Gaps = 5/232 (2%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +L++ C ++A LL M + + + + +L+ Y + + A+ +E
Sbjct: 517 ITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKE 576
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M +S + P+ TYN+ ++ L + A+ + + + G + +T++ + +
Sbjct: 577 MVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSG-TQLELSTYNIILHGLCKNN 635
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW--RSLRLAFPNTANIS 301
L ++A R + L + + + +I + G + E ++ S P+ +
Sbjct: 636 LTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVR--T 693
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
Y M + L+ L + F E + D R+ N ++ + G + A
Sbjct: 694 YSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 745
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 109/254 (42%), Gaps = 1/254 (0%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
+ N +TY +L+ +C+ + AE L+ M+E + S + FN+++ K G E
Sbjct: 186 CAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDAR 245
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+ EM + PD +YN + + A V EM + G V D TF++L
Sbjct: 246 KMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKG-VVPDVVTFTSLIHA 304
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
AG E+A + ++ R + + LI + + G L + + +R +
Sbjct: 305 MCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPS 364
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+ Y +I L + A + E E+ D+ + ++ Y K G ++A EL
Sbjct: 365 VVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNR 424
Query: 359 RARRRGADPNAKTW 372
+ ++G P+A T+
Sbjct: 425 KMLKKGVVPDAITY 438
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 81/204 (39%)
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
++ M + P+ YTYN+ +RAL A A V+ + R A + T++ L + +
Sbjct: 141 LLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAF 200
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
AG + AER + + L + ++ + G + + +++ +
Sbjct: 201 CRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDG 260
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY ++ L A F E D+ +I A + G LE A L +
Sbjct: 261 VSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQ 320
Query: 360 ARRRGADPNAKTWEIFSDYYLRNG 383
R RG N T+ D + RNG
Sbjct: 321 MRERGLRMNEFTFTALIDGFCRNG 344
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 126/293 (43%), Gaps = 20/293 (6%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAA--ENYFVDLPETSKNHLTYGSLLN 131
A +L ME +GM V + L K+ D+A N + + +TY SL+
Sbjct: 384 ARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIR 443
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C+E A L EKM +L L + +L+ + K G+ +K ++ EM ++P
Sbjct: 444 GLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLP 503
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRV--------------AADWTTFSNLAS 237
D TY+V + L+ A+R++ ++ + V A++ + L
Sbjct: 504 DVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLK 563
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS-LRLAF-P 295
+ GL +A++ + + +R+ D S Y LI + + GN+ + + LR F P
Sbjct: 564 GFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSP 623
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEG 348
N+ S +++++ L A+ +E + C+ D + +I KEG
Sbjct: 624 NST--STISLVRGLFEEGMTVEADNVIQELLNCCSLADAETSKALIDLNRKEG 674
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 104/254 (40%), Gaps = 36/254 (14%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+T+ SL++ C+ E+A AL+ +M+E L + F +L+ + + G + ++E
Sbjct: 296 VTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKE 355
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ I P YNV + + + A +I EM+ G + D T+S + S Y + G
Sbjct: 356 MRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKG-MKPDVVTYSTILSGYCKIG 414
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
+ A +++ + D Y LI L E R+ + L +
Sbjct: 415 DTDSAFELNRKMLKKGVVPDAITYSSLIR------GLCEERRLGDACEL---------FE 459
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
M+Q+ + + TY +I + KEG ++ A L + ++
Sbjct: 460 KMLQLGLQPDEF---------------TY-----TTLIDGHCKEGNVQKALSLHDEMIKK 499
Query: 364 GADPNAKTWEIFSD 377
G P+ T+ + D
Sbjct: 500 GVLPDVVTYSVLID 513
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/351 (18%), Positives = 134/351 (38%), Gaps = 63/351 (17%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N T+ +L++ +C+ + A +++M+E + S + +N L+ Y K G ++ +I
Sbjct: 329 NEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELI 388
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EM+A + PD TY+ + + D A + +M + G V D T+S+L E
Sbjct: 389 HEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKG-VVPDAITYSSLIRGLCE 447
Query: 242 -------AGLFEK-------------------------AERALK---ELENRNAHRDLSA 266
LFEK ++AL E+ + D+
Sbjct: 448 ERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVT 507
Query: 267 YQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE 326
Y LI ++ E R+ L P NI Y ++
Sbjct: 508 YSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHC------------------ 549
Query: 327 SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 386
C T + + ++ ++ +G + A+++ + R + + + + R G++
Sbjct: 550 --CRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIM 607
Query: 387 LAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH-FEQEKDVDGAEGFLEIL 436
A+ ++ + G + P+S + + +R FE+ V+ E+L
Sbjct: 608 KALSFHKQLLRCG------FSPNSTSTISLVRGLFEEGMTVEADNVIQELL 652
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 124/278 (44%), Gaps = 11/278 (3%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TYG +LN CK T A L KM+E ++ S + ++ ++ K G+ + ++
Sbjct: 208 NEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLF 267
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVND---ISGAERVIEEMKRDGRVAADWTTFSNLASI 238
EM+ I D Y+ + L ND GA+ + E + R+ + + TFS L +
Sbjct: 268 NEMEMKGIKADVVAYSSIIGGLC--NDGRWDDGAKMLREMIGRN--IIPNVVTFSALIDV 323
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPN 296
+V+ G +A+ E+ R D Y LI + + L E ++ + + PN
Sbjct: 324 FVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPN 383
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
++Y +I K + + F E S D N ++ + + G+L A+EL
Sbjct: 384 I--VTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKEL 441
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
+ RG P+ T+ I D NG+++ A++ EK
Sbjct: 442 FQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEK 479
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/358 (20%), Positives = 150/358 (41%), Gaps = 38/358 (10%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
AL L ME+R + +V +I +D + K +D A + F +++ + + Y S++
Sbjct: 228 ALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIG 287
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C + + +L +M N+ + + F++L+ ++ K G + + EM A I P
Sbjct: 288 GLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAP 347
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D+ TY+ + N + A ++++ M G + T+S L + Y +A + R
Sbjct: 348 DTITYSSLIDGFCKENRLGEANQMLDLMVSKG-CEPNIVTYSILINSYCKAKRVDNGMRL 406
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
E+ ++ D Y L+ + Q+G L+ +++ + + ++Y ++ L +
Sbjct: 407 FCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCD 466
Query: 312 LKDLPGAEKCFKE-----------------------------WESGCATY------DIRV 336
+L A + F++ W C+ D+
Sbjct: 467 NGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLT 526
Query: 337 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
NVMIG K+G L A+ L + + G P+ T+ I +L + +V+ +E+
Sbjct: 527 YNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEE 584
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/350 (20%), Positives = 145/350 (41%), Gaps = 13/350 (3%)
Query: 114 VDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGF--SSMPFNSLMTLYAKT 171
+DL N T ++NC+C++ A +++ + L GF +++ F++L+ +
Sbjct: 95 MDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVG--RALKFGFEPNTITFSTLINGFCLE 152
Query: 172 GHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTT 231
G + A++ M P+ T N + L ++ A +I+ M + G A+ T
Sbjct: 153 GRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYG-CEANEIT 211
Query: 232 FSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 291
+ + + ++G A +++E R+ + Y +I + GNL + ++ +
Sbjct: 212 YGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEME 271
Query: 292 LAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLE 351
+ ++Y ++I L N K +E ++ + +I + KEG+L
Sbjct: 272 MKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLL 331
Query: 352 NAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSE 411
A+EL RG P+ T+ D + + + A L+ + G P+
Sbjct: 332 EAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKG------CEPNIV 385
Query: 412 TIRTFMRHFEQEKDVD-GAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 460
T + + + K VD G F EI K + V + L++ + +G+
Sbjct: 386 TYSILINSYCKAKRVDNGMRLFCEISSKGLVADTV-TYNTLVQGFCQSGK 434
>gi|356556194|ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 829
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 104/448 (23%), Positives = 187/448 (41%), Gaps = 54/448 (12%)
Query: 46 FLKSK-KRVFKWEVGDTLKKLRD---------RKLYYP----ALKLSENMEKR------G 85
FL K K +F VG L +L D + +P AL LS N E+ G
Sbjct: 107 FLSDKGKLLFSSIVGSPLHELNDFFNSVKFELLEADFPSLLKALDLSGNWERALLLFEWG 166
Query: 86 MNKTVSDQAIHLD-----LVAKVQGIDAAENY---FVDLPETSKNHL---TYGSLLNCYC 134
SDQ + LD L+ ++ G ++ + DL K L Y ++L+ Y
Sbjct: 167 WLHFGSDQNLRLDNQVVELMVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHSYA 226
Query: 135 KELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEMKASSIMPDS 193
+ ++A L KMKE+ L + + +N ++ +Y K G ++I ++ EM++ + D
Sbjct: 227 RTGKYKRAIDLFGKMKEIGLDPTLVTYNVMLDVYGKMGRSWDRILELLDEMRSKGLELDE 286
Query: 194 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 253
+T + + A + A + + E+K +G T++++ ++ +AG++ +A LK
Sbjct: 287 FTCSTVISACGREGMLDEARKFLAELKFNGYKPGT-VTYNSMLQVFGKAGIYTEALSILK 345
Query: 254 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVN 311
E+E+ N D Y L Y + G L E + ++ + PN I+Y +I
Sbjct: 346 EMEDNNCPPDSVTYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNA--ITYTTVIDAYGK 403
Query: 312 LKDLPGAEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
A + F + GCA ++ N ++ K+ R E+ ++ + G PN
Sbjct: 404 AGREDDALRLFSLMKDLGCAP-NVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRA 462
Query: 371 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ-EKDVDGA 429
TW G L + + G + P +T T + + + +VD A
Sbjct: 463 TWNTMLAVCSEEGKHNYVNKVLREMKNCG------FEPDKDTFNTLISAYARCGSEVDSA 516
Query: 430 EGFLEILKKAVDDLGVEVFEPLIRTYAA 457
+ + E++K F P + TY A
Sbjct: 517 KMYGEMVKSG--------FTPCVTTYNA 536
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 147/341 (43%), Gaps = 24/341 (7%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
+ N TY S+L K+ TE +L +MK + +N+++ + ++ G +
Sbjct: 423 APNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNK 482
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+++EMK PD T+N + A A + ++ EM + G TT++ L +
Sbjct: 483 VLREMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPC-VTTYNALLNAL 541
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR--LAFPNT 297
G ++ AE ++++ + + ++Y L+ Y + GN+ + ++ + + FP+
Sbjct: 542 ARRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSW 601
Query: 298 ANISYLNMIQVLVNLK--DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEE 355
+ L VL N K L G E+ F + + D+ V N M+ +A+ A E
Sbjct: 602 ILLRTL----VLTNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFARNKMFSKARE 657
Query: 356 LKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRT 415
+ G PN T+ D Y+R G+ A + L+ ++G P + T
Sbjct: 658 MLHFIHECGLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSGPE------PDVVSYNT 711
Query: 416 FMRHFEQEKDVDGAEGFL-EILKKAVDDLGVEVFEPLIRTY 455
++ F ++ + A G L E+ K + +P I TY
Sbjct: 712 VIKGFCRKGLMQEAIGVLSEMTTKGI--------QPTIVTY 744
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/315 (20%), Positives = 139/315 (44%), Gaps = 7/315 (2%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY S+L + K + +A ++L++M++ N S+ +N L Y + G ++ A+I
Sbjct: 322 VTYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSVTYNELAATYVRAGFLDEGMAVIDT 381
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + +MP++ TY + A A R+ MK G A + T++++ ++ +
Sbjct: 382 MTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKDLG-CAPNVYTYNSVLAMLGKKS 440
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
E + L E++ + + + ++ + + G + V ++ R ++ ++
Sbjct: 441 RTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFN 500
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I + K + E T + N ++ A A+ G + AE + + R +
Sbjct: 501 TLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVIQDMRTK 560
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQE 423
G PN ++ + Y + G++K ++ +EK I G PS +RT + +
Sbjct: 561 GFKPNENSYSLLLHCYSKAGNVK-GIEKVEKEIYDGH-----VFPSWILLRTLVLTNHKC 614
Query: 424 KDVDGAEGFLEILKK 438
+ + G E + L+K
Sbjct: 615 RHLRGMERAFDQLQK 629
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 146/366 (39%), Gaps = 23/366 (6%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
+ N T+ ++L +E +L +MK FN+L++ YA+ G
Sbjct: 458 APNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYARCGSEVDSAK 517
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+ EM S P TYN + ALA D AE VI++M+ G + ++S L Y
Sbjct: 518 MYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVIQDMRTKG-FKPNENSYSLLLHCY 576
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
+AG + E+ KE+ + + ++ L TL R R + AF
Sbjct: 577 SKAGNVKGIEKVEKEIYDGHV---FPSWILLRTLVLTNHKC----RHLRGMERAFDQLQK 629
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKE--------WESGCATYDIRVTNVMIGAYAKEGRLE 351
Y + V+ ++ + K F + E G ++ N ++ Y +EG
Sbjct: 630 YGYKPDLVVINSMLSMFARNKMFSKAREMLHFIHECGLQP-NLFTYNCLMDLYVREGECW 688
Query: 352 NAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSE 411
AEE+ + + G +P+ ++ + R G M+ A+ L + G P+
Sbjct: 689 KAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEAIGVLSEMTTKG------IQPTIV 742
Query: 412 TIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKM 471
T TF+ + + D A + + + ++ L+ Y AG+ M K+
Sbjct: 743 TYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGYCKAGKYEEAMDFVSKI 802
Query: 472 EKVEVS 477
+++++S
Sbjct: 803 KELDIS 808
>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g09680-like [Glycine max]
Length = 509
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 110/260 (42%), Gaps = 1/260 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
T+ +L+N CKE ++ L ++M L + + F L+ K G + Q
Sbjct: 213 FTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQM 272
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M A + PD TYN + L V D+ A R++ EM G + D TF+ L + G
Sbjct: 273 MLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASG-LRPDRITFTTLIDGCCKYG 331
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
E A + + D A+ LI+ + G + + R+ R + A + +Y
Sbjct: 332 DMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYT 391
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
++ ++ K KE +S + N ++ K+G+++NA+ L +
Sbjct: 392 MVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNV 451
Query: 364 GADPNAKTWEIFSDYYLRNG 383
G PN T+ I + + ++G
Sbjct: 452 GVAPNDITYNILLEGHSKHG 471
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/316 (19%), Positives = 130/316 (41%), Gaps = 9/316 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N + L++ +CK A + +++ + L + + FN+L++ K G E+ +
Sbjct: 141 NFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRLK 200
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M++ + PD +T++ + L + + +EM G V + TF+ L +
Sbjct: 201 GVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLV-PNGVTFTVLIDGQCK 259
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G + A + + + + DL Y LI + G+L E R+ + + I+
Sbjct: 260 GGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRIT 319
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
+ +I D+ A + + E G D+ T V+I ++GR+ +AE +
Sbjct: 320 FTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFT-VLISGLCRDGRVHDAERMLRDM 378
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 420
G P+ T+ + D + + G++ + L++ G VP T M
Sbjct: 379 LSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGH------VPGVVTYNALMNGL 432
Query: 421 EQEKDVDGAEGFLEIL 436
++ V A+ L+ +
Sbjct: 433 CKQGQVKNAKMLLDAM 448
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/162 (19%), Positives = 72/162 (44%), Gaps = 1/162 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ +T+ +L++ CK E A + +M E + + F L++ + G ++
Sbjct: 316 DRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERML 375
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
++M ++ PD TY + + ++ ++++EM+ DG V T++ L + +
Sbjct: 376 RDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPG-VVTYNALMNGLCK 434
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 283
G + A+ L + N + Y L+ + + G+ +V
Sbjct: 435 QGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGSSVDV 476
>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 125/310 (40%), Gaps = 37/310 (11%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEM 184
Y SL+ +A + +KM+E + + +N ++ +Y K G P KI + + M
Sbjct: 36 YTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPWNKITGLFEGM 95
Query: 185 KASSIMPDSYTYNVW-------------------MRALAAVND----------------I 209
K + I+PD YTYN M+++ V D I
Sbjct: 96 KNAGILPDEYTYNTLITCCRRGSLYEEAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRI 155
Query: 210 SGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQF 269
A V+ EM+ +G + T+++L S Y GL E+A ++ R D+ Y
Sbjct: 156 KEAIEVLREMEVNG-CSPSIVTYNSLISAYARDGLLEEAMELKNQMVERGIKLDVFTYTA 214
Query: 270 LITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGC 329
+++ + +TG R++ +R A ++ +I++ N K F+E + C
Sbjct: 215 MLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICC 274
Query: 330 ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 389
DI N ++ + + G + + +R G P T+ Y R G A+
Sbjct: 275 CVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAM 334
Query: 390 DCLEKAIDTG 399
++ +DTG
Sbjct: 335 AMYKRMLDTG 344
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 134/308 (43%), Gaps = 10/308 (3%)
Query: 71 YYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKN------HL 124
Y A+ + + ME+ G T+ + L++ K + N L E KN
Sbjct: 49 YREAVMVFKKMEEEGCKPTLITYNVILNVYGK---MGMPWNKITGLFEGMKNAGILPDEY 105
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY +L+ C + + E+A A+ E MK + + +N+L+ +Y K+ ++ +++EM
Sbjct: 106 TYNTLITCCRRGSLYEEAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREM 165
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ + P TYN + A A + A + +M G + D T++ + S +V G
Sbjct: 166 EVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERG-IKLDVFTYTAMLSGFVRTGK 224
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
E A R +E+ ++ + LI ++G G +E+ +++ +++ +++
Sbjct: 225 DESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNT 284
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
++ V FKE + + N +I AY++ G + A + +R G
Sbjct: 285 LLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTG 344
Query: 365 ADPNAKTW 372
P+ T+
Sbjct: 345 ITPDLSTY 352
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 133/311 (42%), Gaps = 36/311 (11%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+T+ +LL + + M + + ++MK + +N+L++ Y++ G ++ A+ +
Sbjct: 280 VTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKR 339
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY---- 239
M + I PD TYN + ALA +E+++ EM+ DG + T +L Y
Sbjct: 340 MLDTGITPDLSTYNAVLAALARGGLWEQSEKILAEMQ-DGMCKPNELTHCSLLHAYANGK 398
Query: 240 -----------VEAGLFE--------------------KAERALKELENRNAHRDLSAYQ 268
+ +G+ E +AERA EL+ + DLS
Sbjct: 399 EIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLLEAERAFLELKRKGFSPDLSTLN 458
Query: 269 FLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESG 328
+I +YG+ +++ I ++ + + +Y +++ + ++ +E+ KE +
Sbjct: 459 AMIAIYGRRQMVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAK 518
Query: 329 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 388
DI N +I AY + GR++ A + R G P+ T+ F Y + + A
Sbjct: 519 GIKPDIISYNTVIFAYCRNGRMKEASHIFSEMRESGLIPDVITYNTFVASYAADSMFEEA 578
Query: 389 VDCLEKAIDTG 399
+D + I G
Sbjct: 579 IDVVCYMIKHG 589
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 111/251 (44%), Gaps = 3/251 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ +TY +LL+ Y K ++A +L +M+ S + +NSL++ YA+ G E+ +
Sbjct: 138 DKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLEEAMELK 197
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+M I D +TY + A RV EEM+ G + TF+ L ++
Sbjct: 198 NQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAG-CKPNICTFNALIKMHGN 256
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL-RLAFPNTANI 300
G F + + +E++ D+ + L+ ++GQ G SEV +++ + R+ F +
Sbjct: 257 RGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERD- 315
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
+Y +I A +K T D+ N ++ A A+ G E +E++
Sbjct: 316 TYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSEKILAEM 375
Query: 361 RRRGADPNAKT 371
+ PN T
Sbjct: 376 QDGMCKPNELT 386
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 90/436 (20%), Positives = 170/436 (38%), Gaps = 52/436 (11%)
Query: 66 RDRKLYYPALKLSENMEKRGMNKTVSDQAIH---LDLVAKVQGIDAAENYF--VDLPETS 120
R LY A + E+M+ G V D+ + LD+ K + I A +++ S
Sbjct: 115 RRGSLYEEAAAVFEDMKSMGF---VPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCS 171
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+ +TY SL++ Y ++ + E+A L +M E + + ++++ + +TG E +
Sbjct: 172 PSIVTYNSLISAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRV 231
Query: 181 IQEMKASSIMPDSYTYNVW-------------------MRALAAVNDI------------ 209
+EM+ + P+ T+N ++ V DI
Sbjct: 232 FEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQ 291
Query: 210 ----SGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 265
S V +EMKR G V + T++ L S Y G F++A K + + DLS
Sbjct: 292 NGMDSEVSGVFKEMKRVGFV-PERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLS 350
Query: 266 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 325
Y ++ + G + +I ++ +++ +++ N K++ +E
Sbjct: 351 TYNAVLAALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEI 410
Query: 326 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 385
SG + ++ +K L AE +R+G P+ T Y R +
Sbjct: 411 CSGVIEPHAVLLKTLVLVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMV 470
Query: 386 KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL-EILKKAVDDLG 444
+ L ++G + PS T + M Q ++ + +E L EIL K +
Sbjct: 471 TKTNEILNFMKESG------FTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKP-D 523
Query: 445 VEVFEPLIRTYAAAGR 460
+ + +I Y GR
Sbjct: 524 IISYNTVIFAYCRNGR 539
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 107/261 (40%), Gaps = 9/261 (3%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY ++L + + E++E +L +M++ + + SL+ YA ++ A+ +E+
Sbjct: 351 TYNAVLAALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEI 410
Query: 185 KASSIMPDSYTYNVWMRALAAVND----ISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
+ I P + V ++ L VN + AER E+KR G + D +T + + +IY
Sbjct: 411 CSGVIEPHA----VLLKTLVLVNSKCDLLLEAERAFLELKRKG-FSPDLSTLNAMIAIYG 465
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
+ K L ++ L+ Y L+ ++ Q+ N + + + I
Sbjct: 466 RRQMVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDII 525
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
SY +I + A F E D+ N + +YA + E A ++
Sbjct: 526 SYNTVIFAYCRNGRMKEASHIFSEMRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYM 585
Query: 361 RRRGADPNAKTWEIFSDYYLR 381
+ G PN T+ D Y +
Sbjct: 586 IKHGCKPNQNTYNSVIDGYCK 606
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 101/259 (38%), Gaps = 43/259 (16%)
Query: 129 LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS 188
++N KE A +LL + + + SL+T G + + ++M+
Sbjct: 4 IINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEEG 63
Query: 189 IMPDSYTYNVWMRALAAV----NDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
P TYNV + + N I+G + E MK G + D T++ L + L
Sbjct: 64 CKPTLITYNVILNVYGKMGMPWNKITG---LFEGMKNAG-ILPDEYTYNTLITCCRRGSL 119
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+E+A +++++ D Y L+ +YG++ + E + R + +
Sbjct: 120 YEEAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEV------------ 167
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+GC+ I N +I AYA++G LE A ELK + RG
Sbjct: 168 ----------------------NGCSP-SIVTYNSLISAYARDGLLEEAMELKNQMVERG 204
Query: 365 ADPNAKTWEIFSDYYLRNG 383
+ T+ ++R G
Sbjct: 205 IKLDVFTYTAMLSGFVRTG 223
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 67/137 (48%), Gaps = 1/137 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY SL+ + + E++E +L+++ + + +N+++ Y + G ++ I EM
Sbjct: 491 TYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHIFSEM 550
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ S ++PD TYN ++ + AA + A V+ M + G + T++++ Y +
Sbjct: 551 RESGLIPDVITYNTFVASYAADSMFEEAIDVVCYMIKHG-CKPNQNTYNSVIDGYCKLNR 609
Query: 245 FEKAERALKELENRNAH 261
+ A + + L + H
Sbjct: 610 RDDAIKFISSLHELDPH 626
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 118/276 (42%), Gaps = 12/276 (4%)
Query: 162 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 221
SL+ + ++G K I++ ++ S +PD TYNV + +I A +V+E M
Sbjct: 146 TSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMS- 204
Query: 222 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 281
VA D T++ + ++G ++A L R + D+ Y LI +
Sbjct: 205 ---VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVG 261
Query: 282 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE-SGCATYDIRVTNVM 340
+ ++ +R ++Y +I + L A K GC ++ N++
Sbjct: 262 QAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQP-NVITHNII 320
Query: 341 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 400
+ + GR +AE L R+G P+ T+ I ++ R + A+D LEK G
Sbjct: 321 LRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHG- 379
Query: 401 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 436
+P+S + + F QEK +D A +LEI+
Sbjct: 380 -----CMPNSLSYNPLLHGFCQEKKMDRAIEYLEIM 410
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 110/259 (42%), Gaps = 9/259 (3%)
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
E + +TY L+ C + +A LL++M++ + +N L+ K G ++
Sbjct: 239 ECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEA 298
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
+ M P+ T+N+ +R++ + AER++ +M R G + TF+ L +
Sbjct: 299 IKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKG-CSPSVVTFNILIN 357
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS---EVYRIWRSLRLAF 294
L +A L+++ + +Y L+ + Q + E I S R +
Sbjct: 358 FLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVS-RGCY 416
Query: 295 PNTANISYLNMIQVLVNLKDLPGAEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENA 353
P+ ++Y ++ L A + + S GC+ I N +I K G+ E A
Sbjct: 417 PDI--VTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLI-TYNTVIDGLTKVGKTEYA 473
Query: 354 EELKERARRRGADPNAKTW 372
EL E RR+G P+ T+
Sbjct: 474 AELLEEMRRKGLKPDIITY 492
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 77/164 (46%), Gaps = 3/164 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A +L +M ++G + +V I ++ + + + + A + +P+ N L+Y LL+
Sbjct: 333 AERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLH 392
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C+E ++A LE M + +N+L+T K G + I+ ++ + P
Sbjct: 393 GFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSP 452
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
TYN + L V A ++EEM+R G + D T+S L
Sbjct: 453 VLITYNTVIDGLTKVGKTEYAAELLEEMRRKG-LKPDIITYSTL 495
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/277 (18%), Positives = 118/277 (42%), Gaps = 6/277 (2%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY L+ YCK +KA +LE+M ++ + +N+++ +G ++ ++
Sbjct: 178 ITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDR 234
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
PD TY + + A + + A ++++EM++ G D T++ L + + G
Sbjct: 235 QMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKG-CKPDVVTYNVLINGICKEG 293
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
++A + L + ++ + ++ TG + R+ + + + +++
Sbjct: 294 RLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFN 353
Query: 304 NMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+I L + L A ++ + GC + N ++ + +E +++ A E E
Sbjct: 354 ILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSY-NPLLHGFCQEKKMDRAIEYLEIMVS 412
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
RG P+ T+ ++G AV+ L + G
Sbjct: 413 RGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKG 449
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 115/305 (37%), Gaps = 5/305 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP--ETSKNHLTYGSLLN 131
A+KL + M K+G V + ++ + K +D A + ++P N +T+ +L
Sbjct: 263 AMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILR 322
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C AE LL M S + FN L+ + + ++++M MP
Sbjct: 323 SMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMP 382
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+S +YN + + A +E M G D T++ L + + G + A
Sbjct: 383 NSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRG-CYPDIVTYNTLLTALCKDGKADAAVEI 441
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
L +L ++ L Y +I + G + +R I+Y +++ L
Sbjct: 442 LNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGC 501
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVT-NVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
+ A K F + E G + VT N ++ K + A + +G P
Sbjct: 502 EGKVDEAIKIFHDME-GLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKA 560
Query: 371 TWEIF 375
T+ I
Sbjct: 561 TYTIL 565
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 120/274 (43%), Gaps = 3/274 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TYG +LN CK T A LL KM+E N+ ++ ++ ++ K G + +
Sbjct: 325 NAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLF 384
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EM+ I + TYN+ + +++ +M + ++ + TFS L +V+
Sbjct: 385 NEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR-KINPNVVTFSVLIDSFVK 443
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G +AE KE+ +R D Y LI + + +L + ++ L ++ NI
Sbjct: 444 EGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM-VDLMVSKGCDPNIR 502
Query: 302 YLN-MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
N +I + + F++ D N +I + + G+L A+EL +
Sbjct: 503 TFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEM 562
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
R PN T++I D NG+ + A++ EK
Sbjct: 563 VSRKVPPNIVTYKILLDGLCDNGESEKALEIFEK 596
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 134/329 (40%), Gaps = 15/329 (4%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A L ME +G+ + I + D D+ + + N +T+ L++
Sbjct: 380 AFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLID 439
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ KE +AE L ++M + ++ + SL+ + K H +K ++ M + P
Sbjct: 440 SFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDP 499
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ T+N+ + N I + +M G V AD T++ L + E G A+
Sbjct: 500 NIRTFNILINGYCKANRIDDGLELFRKMSLRG-VVADTVTYNTLIQGFCELGKLNVAKEL 558
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
+E+ +R ++ Y+ L+ G + I+ + + +I N+I
Sbjct: 559 FQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKS-KMELDIGIYNII----- 612
Query: 312 LKDLPGAEKCFKEWESGCATY------DIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
+ + A K W+ C+ ++ N+MIG K+G L AE L + G
Sbjct: 613 IHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGH 672
Query: 366 DPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
P+ T+ I +L +GD +V +E+
Sbjct: 673 APDGWTYNILIRAHLGDGDATKSVKLIEE 701
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/378 (18%), Positives = 147/378 (38%), Gaps = 45/378 (11%)
Query: 114 VDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGH 173
++L + N T ++NC+C+ A + + K+ +L +++ F++L+ G
Sbjct: 212 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 271
Query: 174 PEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFS 233
+ ++ M PD T N + L + A +I++M G + T+
Sbjct: 272 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYG-CQPNAVTYG 330
Query: 234 NLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 293
+ ++ ++G A L+++E RN D Y +I + G+L + +
Sbjct: 331 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNL------- 383
Query: 294 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
F E E T +I N++IG + GR ++
Sbjct: 384 ----------------------------FNEMEMKGITTNIITYNILIGGFCNAGRWDDG 415
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETI 413
+L +R +PN T+ + D +++ G ++ A + ++ I G P + T
Sbjct: 416 AKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA------PDTITY 469
Query: 414 RTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPV--MLRRLKM 471
+ + F +E +D A ++++ D + F LI Y A R + R++ +
Sbjct: 470 TSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSL 529
Query: 472 EKVEVSEAS-KKLLEAIC 488
V + L++ C
Sbjct: 530 RGVVADTVTYNTLIQGFC 547
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/340 (18%), Positives = 145/340 (42%), Gaps = 11/340 (3%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+T +L+N C +A L++KM E +++ + ++ + K+G ++++
Sbjct: 292 ITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRK 351
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ +I D+ Y++ + L + A + EM+ G + + T++ L + AG
Sbjct: 352 MEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG-ITTNIITYNILIGGFCNAG 410
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANIS 301
++ + L+++ R + ++ + LI + + G L E + + + R P+T I+
Sbjct: 411 RWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT--IT 468
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y ++I L A + S +IR N++I Y K R+++ EL +
Sbjct: 469 YTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMS 528
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
RG + T+ + G + +A + ++ + K P+ T + +
Sbjct: 529 LRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR------KVPPNIVTYKILLDGLC 582
Query: 422 QEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 461
+ + A E ++K+ +L + ++ +I A +
Sbjct: 583 DNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 622
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 134/318 (42%), Gaps = 9/318 (2%)
Query: 69 KLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTY 126
K Y L L + ME +G+ + +I ++ + + + A + + + N +T+
Sbjct: 200 KQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITF 259
Query: 127 GSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKA 186
+L+N C E +A L+++M E+ + N+L+ +G + +I +M
Sbjct: 260 STLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVE 319
Query: 187 SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE 246
P++ TY + + + A ++ +M+ + + D +S + + G +
Sbjct: 320 YGCQPNAVTYGPVLNVMCKSGQTALAMELLRKME-ERNIKLDAVKYSIIIDGLCKHGSLD 378
Query: 247 KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLN 304
A E+E + ++ Y LI + G + ++ R + R PN S L
Sbjct: 379 NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVL- 437
Query: 305 MIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
I V L AE+ KE G A I T+ +I + KE L+ A ++ + +
Sbjct: 438 -IDSFVKEGKLREAEELHKEMIHRGIAPDTITYTS-LIDGFCKENHLDKANQMVDLMVSK 495
Query: 364 GADPNAKTWEIFSDYYLR 381
G DPN +T+ I + Y +
Sbjct: 496 GCDPNIRTFNILINGYCK 513
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 83/190 (43%), Gaps = 43/190 (22%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLV---AKVQGIDAAENYFVDLP--ETSKNHLTYGS 128
L+L M RG+ V+D + L+ ++ ++ A+ F ++ + N +TY
Sbjct: 520 GLELFRKMSLRGV---VADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKI 576
Query: 129 LLNCYCKELMTEKAEALLEKMK----ELNLG---------------------FSSMP--- 160
LL+ C +EKA + EK++ EL++G F S+P
Sbjct: 577 LLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 636
Query: 161 -------FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAE 213
+N ++ K G + + ++M+ PD +TYN+ +RA D + +
Sbjct: 637 VKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSV 696
Query: 214 RVIEEMKRDG 223
++IEE+KR G
Sbjct: 697 KLIEELKRCG 706
>gi|1931651|gb|AAB65486.1| membrane-associated salt-inducible protein isolog; 88078-84012
[Arabidopsis thaliana]
Length = 652
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 118/259 (45%), Gaps = 2/259 (0%)
Query: 124 LTYGSLL-NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQ 182
+TY +LL C + KA L+ ++ + S+ + +++ + A G E+ IQ
Sbjct: 202 VTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQ 261
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
+MK P+ Y Y+ + + + D A+ ++ EMK G V + + L +Y++
Sbjct: 262 QMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVP-NKVMMTTLLKVYIKG 320
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY 302
GLF+++ L ELE+ + Y L+ + G L E I+ ++ + +
Sbjct: 321 GLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYAN 380
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
MI L K A++ ++ E+ D+ + N M+ AY + G +E+ + ++
Sbjct: 381 SIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDE 440
Query: 363 RGADPNAKTWEIFSDYYLR 381
+ P+ T+ I Y+++
Sbjct: 441 QAVSPDYNTFHILIKYFIK 459
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 86/184 (46%), Gaps = 3/184 (1%)
Query: 109 AENYF--VDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMT 166
AEN+ + + S N Y SLLN Y + +KA+ L+ +MK + L + + +L+
Sbjct: 256 AENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLK 315
Query: 167 LYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA 226
+Y K G ++ ++ E++++ + Y + M L+ + A + ++MK G V
Sbjct: 316 VYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKG-VR 374
Query: 227 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
+D S + S + F++A+ ++ E DL ++ Y + G + V R+
Sbjct: 375 SDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRM 434
Query: 287 WRSL 290
+ +
Sbjct: 435 MKKM 438
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 10/209 (4%)
Query: 162 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV-NDISGAERVIEEMK 220
NS+++ K G + + +MK + PD TYN + V N A +I E+
Sbjct: 170 NSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELP 229
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
+G + D + + +I G E+AE +++++ ++ Y L+ Y G+
Sbjct: 230 HNG-IQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDY 288
Query: 281 ---SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES-GCATYDIRV 336
E+ +S+ L PN ++ L + + L D + + E ES G A ++
Sbjct: 289 KKADELMTEMKSIGLV-PNKVMMTTLLKVYIKGGLFD--RSRELLSELESAGYAENEMPY 345
Query: 337 TNVMIGAYAKEGRLENAEELKERARRRGA 365
+M G +K G+LE A + + + +G
Sbjct: 346 CMLMDG-LSKAGKLEEARSIFDDMKGKGV 373
>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
Length = 592
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 116/276 (42%), Gaps = 1/276 (0%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
T N Y +++ +CK+ M + A +LL +MK+ ++ +++L+ K E +
Sbjct: 209 TKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVR 268
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+ EM +I P+ T+N + L + AE ++ M G V D T++ +
Sbjct: 269 TLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKG-VDPDVITYNMIIDG 327
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
Y G ++A + N++ ++ +Y LI Y + + E ++ R + +
Sbjct: 328 YGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPS 387
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
++ ++ L L A+ F E S D+ ++G Y K G +E A
Sbjct: 388 IVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFH 447
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
+ RR D N + + D +NG + A EK
Sbjct: 448 KLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEK 483
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/339 (19%), Positives = 140/339 (41%), Gaps = 42/339 (12%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N + YG+++N CK+ T+KA LL M++ + ++ ++ ++ + K G + +++
Sbjct: 177 NEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLL 236
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EMK SI PD +TY+ + AL ++ + EM + + TF+++ +
Sbjct: 237 NEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIH-LNIYPNVCTFNSVIDGLCK 295
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G E AE ++ + + D+ Y +I YG G + I+ S+
Sbjct: 296 EGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSM----------- 344
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
+N K E +Y N++I YA++ +++ A ++
Sbjct: 345 --------IN-----------KSIEPNIISY-----NILINGYARQKKIDEAMQVCREIS 380
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
++G P+ T + G K A + ++ + G +P T T + +
Sbjct: 381 QKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGH------IPDLYTHCTLLGGYF 434
Query: 422 QEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 460
+ V+ A L++ +D ++++ +I G+
Sbjct: 435 KNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGK 473
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 128/311 (41%), Gaps = 3/311 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
A L M+++ + + + +D + K+ + F+++ + N T+ S+++
Sbjct: 232 ATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVID 291
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CKE E AE ++ M E + + +N ++ Y G ++ I M SI P
Sbjct: 292 GLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEP 351
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ +YN+ + A I A +V E+ + G + T L ++ E G + A+
Sbjct: 352 NIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLF-ELGRTKSAQNF 410
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
E+ + DL + L+ Y + G + E + L +T Y +I L
Sbjct: 411 FDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCK 470
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
L A F++ D+ MI Y +EG L+ A+++ + G + +T
Sbjct: 471 NGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRT 530
Query: 372 WEIFSDYYLRN 382
+ + +LR+
Sbjct: 531 YNVIVRGFLRS 541
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 102/254 (40%), Gaps = 1/254 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +++ Y ++A + + M ++ + + +N L+ YA+ ++ + +E
Sbjct: 319 ITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCRE 378
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
+ + P T NV + L + A+ +EM G + D T L Y + G
Sbjct: 379 ISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIP-DLYTHCTLLGGYFKNG 437
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
L E+A +LE R ++ Y +I + G L + + + L L + I+Y
Sbjct: 438 LVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYT 497
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
MI L A+ ++ E D R NV++ + + ++ + E +
Sbjct: 498 AMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGK 557
Query: 364 GADPNAKTWEIFSD 377
A T E+ D
Sbjct: 558 SFSFEAATVELLMD 571
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/202 (19%), Positives = 81/202 (40%)
Query: 196 YNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 255
+N +R L A N + A + +++ R+ + + + + + G +KA L+ +
Sbjct: 145 FNTLLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLM 204
Query: 256 ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDL 315
E + + Y +I + + G L + ++ +Y +I L L
Sbjct: 205 EQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQW 264
Query: 316 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 375
F E ++ N +I KEG++E+AEE+ +G DP+ T+ +
Sbjct: 265 ENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMI 324
Query: 376 SDYYLRNGDMKLAVDCLEKAID 397
D Y G + A + + I+
Sbjct: 325 IDGYGLRGQVDRAREIFDSMIN 346
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 120/274 (43%), Gaps = 3/274 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TYG +LN CK T A LL KM+E N+ ++ ++ ++ K G + +
Sbjct: 227 NAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLF 286
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EM+ I + TYN+ + +++ +M + ++ + TFS L +V+
Sbjct: 287 NEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR-KINPNVVTFSVLIDSFVK 345
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G +AE KE+ +R D Y LI + + +L + ++ L ++ NI
Sbjct: 346 EGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV-DLMVSKGCDPNIR 404
Query: 302 YLN-MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
N +I + + F++ D N +I + + G+L A+EL +
Sbjct: 405 TFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEM 464
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
R PN T++I D NG+ + A++ EK
Sbjct: 465 VSRKVPPNIVTYKILLDGLCDNGESEKALEIFEK 498
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 134/329 (40%), Gaps = 15/329 (4%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A L ME +G+ + I + D D+ + + N +T+ L++
Sbjct: 282 AFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLID 341
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ KE +AE L ++M + ++ + SL+ + K H +K ++ M + P
Sbjct: 342 SFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDP 401
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ T+N+ + N I + +M G V AD T++ L + E G A+
Sbjct: 402 NIRTFNILINGYCKANRIDDGLELFRKMSLRG-VVADTVTYNTLIQGFCELGKLNVAKEL 460
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
+E+ +R ++ Y+ L+ G + I+ + + +I N+I
Sbjct: 461 FQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKS-KMELDIGIYNII----- 514
Query: 312 LKDLPGAEKCFKEWESGCATY------DIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
+ + A K W+ C+ ++ N+MIG K+G L AE L + G
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGH 574
Query: 366 DPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
P+ T+ I +L +GD +V +E+
Sbjct: 575 APDGWTYNILIRAHLGDGDATKSVKLIEE 603
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/347 (19%), Positives = 136/347 (39%), Gaps = 42/347 (12%)
Query: 114 VDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGH 173
++L + N T ++NC+C+ A + + K+ +L +++ F++L+ G
Sbjct: 114 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 173
Query: 174 PEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFS 233
+ ++ M PD T N + L + A +I++M G + T+
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYG-CQPNAVTYG 232
Query: 234 NLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 293
+ ++ ++G A L+++E RN D Y +I + G+L + +
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNL------- 285
Query: 294 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
F E E T +I N++IG + GR ++
Sbjct: 286 ----------------------------FNEMEMKGITTNIITYNILIGGFCNAGRWDDG 317
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETI 413
+L +R +PN T+ + D +++ G ++ A + ++ I G P + T
Sbjct: 318 AKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG------IAPDTITY 371
Query: 414 RTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 460
+ + F +E +D A ++++ D + F LI Y A R
Sbjct: 372 TSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANR 418
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/340 (18%), Positives = 145/340 (42%), Gaps = 11/340 (3%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+T +L+N C +A L++KM E +++ + ++ + K+G ++++
Sbjct: 194 ITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRK 253
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ +I D+ Y++ + L + A + EM+ G + + T++ L + AG
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG-ITTNIITYNILIGGFCNAG 312
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANIS 301
++ + L+++ R + ++ + LI + + G L E + + + R P+T I+
Sbjct: 313 RWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT--IT 370
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y ++I L A + S +IR N++I Y K R+++ EL +
Sbjct: 371 YTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMS 430
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
RG + T+ + G + +A + ++ + K P+ T + +
Sbjct: 431 LRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR------KVPPNIVTYKILLDGLC 484
Query: 422 QEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 461
+ + A E ++K+ +L + ++ +I A +
Sbjct: 485 DNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 524
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 134/318 (42%), Gaps = 9/318 (2%)
Query: 69 KLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTY 126
K Y L L + ME +G+ + +I ++ + + + A + + + N +T+
Sbjct: 102 KQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITF 161
Query: 127 GSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKA 186
+L+N C E +A L+++M E+ + N+L+ +G + +I +M
Sbjct: 162 STLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVE 221
Query: 187 SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE 246
P++ TY + + + A ++ +M+ + + D +S + + G +
Sbjct: 222 YGCQPNAVTYGPVLNVMCKSGQTALAMELLRKME-ERNIKLDAVKYSIIIDGLCKHGSLD 280
Query: 247 KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLN 304
A E+E + ++ Y LI + G + ++ R + R PN S L
Sbjct: 281 NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVL- 339
Query: 305 MIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
I V L AE+ KE G A I T+ +I + KE L+ A ++ + +
Sbjct: 340 -IDSFVKEGKLREAEELHKEMIHRGIAPDTITYTS-LIDGFCKENHLDKANQMVDLMVSK 397
Query: 364 GADPNAKTWEIFSDYYLR 381
G DPN +T+ I + Y +
Sbjct: 398 GCDPNIRTFNILINGYCK 415
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 87/199 (43%), Gaps = 44/199 (22%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLV---AKVQGIDAAENYFVDLP--ETSKNHLTYGS 128
L+L M RG+ V+D + L+ ++ ++ A+ F ++ + N +TY
Sbjct: 422 GLELFRKMSLRGV---VADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKI 478
Query: 129 LLNCYCKELMTEKAEALLEKMK----ELNLG---------------------FSSMP--- 160
LL+ C +EKA + EK++ EL++G F S+P
Sbjct: 479 LLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 538
Query: 161 -------FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAE 213
+N ++ K G + + ++M+ PD +TYN+ +RA D + +
Sbjct: 539 VKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSV 598
Query: 214 RVIEEMKRDGRVAADWTTF 232
++IEE+KR G + D +T
Sbjct: 599 KLIEELKRCG-FSVDASTI 616
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 149/345 (43%), Gaps = 18/345 (5%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMP----FNSLMTLYAKTGHPEKIPA 179
+Y +LL C E +++A LL M + + G S P +N+++ + K G +K +
Sbjct: 164 FSYNNLLKGLCDENRSQEALELLHMMAD-DRGGGSPPDVVSYNTVLNGFFKEGDSDKAYS 222
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
EM I+PD TY+ + AL + A V+ M ++G V D T++++ Y
Sbjct: 223 TYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNG-VMPDCMTYNSILHGY 281
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNT 297
+G ++A LK++ + ++ Y L+ + G +E +I+ S+ R P+
Sbjct: 282 CSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDI 341
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
A +Y ++Q L D V N++I AYAK+ +++ A +
Sbjct: 342 A--TYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVF 399
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 417
+ R+ G +PN + D ++G + A+ E+ ID G P+ + +
Sbjct: 400 SKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEG------LTPNIIVYTSLI 453
Query: 418 RHFEQEKDVDGAEGF-LEILKKAVDDLGVEVFEPLIRTYAAAGRT 461
D AE LE+L + + L F +I ++ GR
Sbjct: 454 HGLCTCDKWDKAEELILEMLDRGI-CLNTIFFNSIIDSHCKEGRV 497
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 138/320 (43%), Gaps = 13/320 (4%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A+ + M + G+N V +D++ K +D A YF + + + N + Y SL++
Sbjct: 395 AMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIH 454
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C +KAE L+ +M + + +++ FNS++ + K G + + M + P
Sbjct: 455 GLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 514
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D TYN + + A +++ M G V D T+ L + Y + A
Sbjct: 515 DIITYNTLIDGCCLAGKMDEATKLLASMVSVG-VKPDIVTYGTLINGYCRVSRMDDALAL 573
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV- 310
KE+ + ++ Y ++ T + ++ S+ + +Y ++ L
Sbjct: 574 FKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCK 633
Query: 311 -NLKDLPGAEKCFKEWESGCAT---YDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD 366
NL D + + +++ C T + R N+MIGA K GR++ A++L G
Sbjct: 634 NNLTD-----EALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLV 688
Query: 367 PNAKTWEIFSDYYLRNGDMK 386
P+ +T+ + ++ + G ++
Sbjct: 689 PDVRTYSLMAENLIEQGSLE 708
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 107/278 (38%), Gaps = 36/278 (12%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY SL+N CK + +A + + M + L + +L+ YA G ++ A++
Sbjct: 305 NVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALL 364
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M + I PD + +N+ + A A + A V +M++ G + + + + + +
Sbjct: 365 DLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHG-LNPNVVCYGTVIDVLCK 423
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
+G + A +++ + G T N+ I
Sbjct: 424 SGSVDDAMLYFEQMIDE----------------GLTPNI-------------------IV 448
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y ++I L AE+ E + N +I ++ KEGR+ +E+L +
Sbjct: 449 YTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMV 508
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
R G P+ T+ D G M A L + G
Sbjct: 509 RIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVG 546
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 69/354 (19%), Positives = 130/354 (36%), Gaps = 48/354 (13%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMT-LYAKTGHPEKIPAIIQE 183
TY L+ C C+ + A L + + ++ F L+ L A + + +++
Sbjct: 94 TYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRR 153
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM--KRDGRVAADWTTFSNLASIYVE 241
M +PD ++YN ++ L N A ++ M R G D +++ + + + +
Sbjct: 154 MTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFK 213
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G +KA E+ +R D+ Y +I + + +
Sbjct: 214 EGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKA------------------ 255
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
+ ++ +V +P C TY N ++ Y G+ + A ++ R
Sbjct: 256 -MEVLNTMVKNGVMP-----------DCMTY-----NSILHGYCSSGQPKEAIGTLKKMR 298
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID--TGRGDGGKWVPSSETIRTFMRH 419
G +PN T+ +Y +NG A K D T RG P T RT ++
Sbjct: 299 SDGVEPNVVTYSSLMNYLCKNGRSTEA----RKIFDSMTKRG----LEPDIATYRTLLQG 350
Query: 420 FEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEK 473
+ + + L+++ + VF LI YA + ML KM +
Sbjct: 351 YATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQ 404
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 51/267 (19%), Positives = 102/267 (38%), Gaps = 40/267 (14%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +L++ C ++A LL M + + + + +L+ Y + + A+ +E
Sbjct: 517 ITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKE 576
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M +S + P+ TYN+ ++ L + A+ + + + G
Sbjct: 577 MVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSG-------------------- 616
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGN--LSEVYRIWRSLRLAFPNTANIS 301
+LE LS Y I L+G N E R++++L L +
Sbjct: 617 ---------TQLE-------LSTYN--IILHGLCKNNLTDEALRMFQNLCLTDLQLETRT 658
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
+ MI L+ + A+ F + D+R ++M ++G LE ++L
Sbjct: 659 FNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSME 718
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLA 388
G +++ L+ GD+ A
Sbjct: 719 ENGCSADSRMLNSIVRKLLQRGDITRA 745
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 110/245 (44%), Gaps = 1/245 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
TY +++ CKE E + L +M+E+ L + +NSL+ Y K G E++ ++ E
Sbjct: 231 FTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNE 290
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
MK +PD TYN + + A EMK +G + + T+S L + + G
Sbjct: 291 MKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNG-LKPNVVTYSTLIDAFCKEG 349
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
+ + A + L ++ + Y LI + GNL+E +++ + A ++Y
Sbjct: 350 MMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYT 409
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
++ L + AE+ F+ + + +V ++ Y K R+E+A ++ ++
Sbjct: 410 ALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTEC 469
Query: 364 GADPN 368
P+
Sbjct: 470 NIKPD 474
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/398 (20%), Positives = 171/398 (42%), Gaps = 10/398 (2%)
Query: 7 FGRTKNIAKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKS--KKRVFKWEVG-DTLK 63
F R +N K L RL K G+ + VR+ N + + VF + V D L
Sbjct: 183 FSRMRNFRTLPKARSCNFLLHRLSKSGNGQL-VRKFFNDMIGAGIAPSVFTYNVMIDYLC 241
Query: 64 KLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--K 121
K D + + +L M + G++ V +D KV ++ + F ++ +
Sbjct: 242 KEGDLE---NSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVP 298
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ +TY L+NCYCK +A +MK L + + +++L+ + K G + ++
Sbjct: 299 DIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLL 358
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+M+ + ++P+ +TY + A +++ A +++ +M + G V + T++ L +
Sbjct: 359 XDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAG-VKLNIVTYTALLDGLCK 417
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
AG +AE + + + Y L+ Y + + + +I + + I
Sbjct: 418 AGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLIL 477
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y ++I + + L + +E +S + + ++ +I AY K G+ +A + +
Sbjct: 478 YGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQ 537
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
G + T+ + D G ++LAVD + + G
Sbjct: 538 DVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLG 575
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/327 (20%), Positives = 132/327 (40%), Gaps = 63/327 (19%)
Query: 115 DLPETSKNHLTYGS-----LLNCYCKELMTEKAEALLEKMKELNLGFSSMP----FNSLM 165
D+ +++N GS L + + + + E+A +M+ F ++P N L+
Sbjct: 147 DMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRN----FRTLPKARSCNFLL 202
Query: 166 TLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRV 225
+K+G+ + + +M + I P +TYNV + L D+ + R+ +M+ G +
Sbjct: 203 HRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMG-L 261
Query: 226 AADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 285
+ D T+++L Y + G E+ E+++ D+ Y LI Y +
Sbjct: 262 SPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCK--------- 312
Query: 286 IWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 345
+ +P A + F E ++ ++ + +I A+
Sbjct: 313 --------------------------FEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFC 346
Query: 346 KEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM----KLAVDCLEKAID---- 397
KEG ++ A +L RR G PN T+ D + G++ KL D L+ +
Sbjct: 347 KEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIV 406
Query: 398 --TGRGDG----GKWVPSSETIRTFMR 418
T DG G+ + + E R+ ++
Sbjct: 407 TYTALLDGLCKAGRMIEAEEVFRSMLK 433
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 102/241 (42%), Gaps = 5/241 (2%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+ YGS++ +C + E+ + +LE+MK + + + +++ Y K G QE
Sbjct: 476 ILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQE 535
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ + TY V + L + A M G + + +++L
Sbjct: 536 MQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLG-LQPNVAVYTSLIDGLCXNN 594
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE-VYRIWRSLRLAFPNTANISY 302
E A++ E++ R D++A+ LI + GNL E + I R LA ++ Y
Sbjct: 595 CIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHV-Y 653
Query: 303 LNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
+++ +L A K F E E G ++ + ++ Y K G+L+ A ELK
Sbjct: 654 TSLVSGFSQCGELHQARKFFNEMIEKGILPEEV-LCICLLREYYKRGQLDEAIELKNEME 712
Query: 362 R 362
R
Sbjct: 713 R 713
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 81/209 (38%), Gaps = 6/209 (2%)
Query: 231 TFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
F L S++VE GL E+A + N + FL+ ++GN V + + +
Sbjct: 162 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 221
Query: 291 RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRL 350
A + +Y MI L DL + + F + + D+ N +I Y K G L
Sbjct: 222 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 281
Query: 351 ENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSS 410
E L + G P+ T+ + Y + M A + + + G P+
Sbjct: 282 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLK------PNV 335
Query: 411 ETIRTFMRHFEQEKDVDGAEGFLEILKKA 439
T T + F +E + GA L +++
Sbjct: 336 VTYSTLIDAFCKEGMMQGAIKLLXDMRRT 364
>gi|297820044|ref|XP_002877905.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323743|gb|EFH54164.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 439
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 141/327 (43%), Gaps = 16/327 (4%)
Query: 77 LSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAEN---YFVDLPETSKNHLTYGSLLNCY 133
L E M G+ T+ + + K + +D A + Y + + + T+ L+ C
Sbjct: 116 LFEVMLSEGLKPTIDVYTSLIAVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLIRCC 175
Query: 134 CKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM-KASSIMPD 192
CK + + ++ +M L +G S++ +N+++ Y K G E++ ++ +M + +PD
Sbjct: 176 CKLGRFDLVKRIILEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMENVLADMIEDGDSLPD 235
Query: 193 SYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERAL 252
+T N + I +E V E DG + D TTF+ L + +AG+++K +
Sbjct: 236 VFTLN---------SIIGSSEMVAHE--EDGELP-DITTFNILILSFGKAGMYKKMSSVM 283
Query: 253 KELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNL 312
+E R Y +I +G+ G + ++ ++R ++ +ISY +++
Sbjct: 284 DFMEKRFFSLTTVTYNIVIETFGKAGKIEKMDDVFRKMKYQGVKPNSISYCSLVNAYSKA 343
Query: 313 KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
+ + ++ + D N +I AY + G L +EL + R P+ T+
Sbjct: 344 GLVGKIDSILRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITF 403
Query: 373 EIFSDYYLRNGDMKLAVDCLEKAIDTG 399
Y +G + ++ I TG
Sbjct: 404 ATMIKTYKAHGIFDAVQELEKQMISTG 430
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 118/257 (45%), Gaps = 26/257 (10%)
Query: 134 CKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKA-SSIMPD 192
CK+ ++A L E M L + + SL+ +Y K+ +K + ++ MK+ S PD
Sbjct: 107 CKQ--PDQASLLFEVMLSEGLKPTIDVYTSLIAVYGKSELLDKAFSTLEYMKSVSDCKPD 164
Query: 193 SYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERAL 252
+T+ V +R + +R+I EM G V T++ + Y +AG+FE+ E L
Sbjct: 165 VFTFTVLIRCCCKLGRFDLVKRIILEMSYLG-VGCSTVTYNTIIDGYGKAGMFEEMENVL 223
Query: 253 KEL-ENRNAHRDLSAYQFLI-----TLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI 306
++ E+ ++ D+ +I + + G L ++ + L L+F M
Sbjct: 224 ADMIEDGDSLPDVFTLNSIIGSSEMVAHEEDGELPDI-TTFNILILSFGKAG------MY 276
Query: 307 QVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD 366
+ + ++ D EK F + TY N++I + K G++E +++ + + +G
Sbjct: 277 KKMSSVMDF--MEKRF--FSLTTVTY-----NIVIETFGKAGKIEKMDDVFRKMKYQGVK 327
Query: 367 PNAKTWEIFSDYYLRNG 383
PN+ ++ + Y + G
Sbjct: 328 PNSISYCSLVNAYSKAG 344
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 72/145 (49%), Gaps = 1/145 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S +TY ++ + K EK + + KMK + +S+ + SL+ Y+K G KI +
Sbjct: 292 SLTTVTYNIVIETFGKAGKIEKMDDVFRKMKYQGVKPNSISYCSLVNAYSKAGLVGKIDS 351
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I++++ S ++ D+ +N + A D++ + + +M+ + + D TF+ + Y
Sbjct: 352 ILRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQME-ERKCKPDKITFATMIKTY 410
Query: 240 VEAGLFEKAERALKELENRNAHRDL 264
G+F+ + K++ + + D+
Sbjct: 411 KAHGIFDAVQELEKQMISTGENLDI 435
>gi|255661188|gb|ACU25763.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
Length = 426
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 121/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 6 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 65
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S PD YN + A +I EM+ G V + ++S L ++Y
Sbjct: 66 IFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAG-VMPNTASYSTLLTMY 124
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ +R
Sbjct: 125 VENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 245 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 284
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 109/221 (49%), Gaps = 20/221 (9%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML 276
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S + D Y + A ++ A+R++ E+K + D T LA
Sbjct: 277 FQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKSPDNIPRD-TAIHILAG--- 332
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + +D++ ++ +I L Y + NL EV+ R L FP++
Sbjct: 333 -AGRIEEATYVFRQAIDAGEVKDITVFERMIHLFSKYKKYANLIEVFDKMRGLGY-FPDS 390
Query: 298 ANISYLNMIQVLVN----LKDLPGAEKCFKEW-ESGCATYD 333
N+I +++N L + A + E E GC D
Sbjct: 391 ------NVIALVLNAYGKLHEFDKANGVYMEMQEVGCVFSD 425
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 8/202 (3%)
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
++ PD YTY+ + A +++M++D RV D +SNL + + + K
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNM 305
A L+ DL AY +I ++G+ E + +R A PNTA SY +
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTA--SYSTL 120
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
+ + V K A F E D+ N+MI Y + G + A++L R+ G
Sbjct: 121 LTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180
Query: 366 DPNAKTWEIFSDYYLRNGDMKL 387
+PN ++ Y GD +L
Sbjct: 181 EPNVVSYNTLLRVY---GDAEL 199
>gi|326504498|dbj|BAJ91081.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 793
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/314 (20%), Positives = 140/314 (44%), Gaps = 7/314 (2%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY SL++ Y + + +++ + ++M E + +N++++ A+ G E+ + EM
Sbjct: 461 TYVSLISSYSRCGLFDQSMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEM 520
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ PD +Y+ + A A + + + E++ + ++ + L + +
Sbjct: 521 ENLDCRPDELSYSSLLHAYANAKKLDKMKALSEDIYAE-KIESHHGLVKTLVLVNSKVNN 579
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+ E+A EL R D++ ++++YG+ + +V I ++ + N + +Y +
Sbjct: 580 LSETEKAFLELGRRRCSLDINVLNAMVSVYGKNRMVKKVEEILSLMKGSSINLSTATYNS 639
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
++ + L D E E +S A D N MI AY ++G+++ A L + G
Sbjct: 640 LMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKSSG 699
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 424
P+ T+ IF Y+ N + A+D + + G P+ T + ++ + +
Sbjct: 700 LIPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTRG------CKPNERTYNSILQEYCRHG 753
Query: 425 DVDGAEGFLEILKK 438
+ A+ FL L +
Sbjct: 754 KIADAKSFLSNLPQ 767
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 99/211 (46%), Gaps = 3/211 (1%)
Query: 101 AKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSS 158
+KV + E F++L S + ++++ Y K M +K E +L MK ++ S+
Sbjct: 575 SKVNNLSETEKAFLELGRRRCSLDINVLNAMVSVYGKNRMVKKVEEILSLMKGSSINLST 634
Query: 159 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 218
+NSLM +Y++ G EK I+ E+K+S PD Y+YN + A + A R+ E
Sbjct: 635 ATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEASRLFSE 694
Query: 219 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 278
MK G + D T++ YV +FE+A ++ + R + Y ++ Y + G
Sbjct: 695 MKSSGLI-PDIVTYNIFVKSYVANSMFEEAIDLVRYMVTRGCKPNERTYNSILQEYCRHG 753
Query: 279 NLSEVYRIWRSLRLAFPNTANISYLNMIQVL 309
+++ +L P + ++++L
Sbjct: 754 KIADAKSFLSNLPQLHPGISKQEQQRLLELL 784
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 110/235 (46%), Gaps = 1/235 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ +T+ SLL+ Y K M ++A +L++M+ S + +NSL++ Y K G ++ +
Sbjct: 283 DKVTFNSLLDVYGKARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELK 342
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+EM+ I PD TY + L I A +EM R+G + T++ L ++
Sbjct: 343 EEMEVKGIQPDVITYTTLISGLDRAGKIDAAIGTYDEMLRNG-CKPNLCTYNALIKLHGV 401
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G F + +L + D+ + L+ ++GQ G SEV +++ ++ + +
Sbjct: 402 RGKFPEMMAVFDDLRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDT 461
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
Y+++I + + +K DI N ++ A A+ GR E AE+L
Sbjct: 462 YVSLISSYSRCGLFDQSMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKL 516
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/328 (19%), Positives = 136/328 (41%), Gaps = 3/328 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
A +L E ME +G+ V + + + IDAA + ++ N TY +L+
Sbjct: 338 AAELKEEMEVKGIQPDVITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIK 397
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ + A+ + ++ + +N+L+ ++ + G ++ + +EMK S +P
Sbjct: 398 LHGVRGKFPEMMAVFDDLRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVP 457
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ TY + + + + + + M G + D +T++ + S G +E+AE+
Sbjct: 458 ERDTYVSLISSYSRCGLFDQSMEIYKRMIEAG-IYPDISTYNAVLSALARGGRWEQAEKL 516
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
E+EN + D +Y L+ Y L ++ + + + + ++ V
Sbjct: 517 FAEMENLDCRPDELSYSSLLHAYANAKKLDKMKALSEDIYAEKIESHHGLVKTLVLVNSK 576
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+ +L EK F E + DI V N M+ Y K ++ EE+ + + + T
Sbjct: 577 VNNLSETEKAFLELGRRRCSLDINVLNAMVSVYGKNRMVKKVEEILSLMKGSSINLSTAT 636
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ Y R GD + + L + +G
Sbjct: 637 YNSLMHMYSRLGDCEKCENILTEIKSSG 664
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 111/260 (42%), Gaps = 4/260 (1%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK-IPAIIQEM 184
Y +L++ + + A A+ +M + + + +N ++ +Y+K P K + A++ M
Sbjct: 181 YTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVVALVDSM 240
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
K I D YTYN + A +V +EM+ G D TF++L +Y +A +
Sbjct: 241 KNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAG-FEPDKVTFNSLLDVYGKARM 299
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
++A LKE+E + Y LI+ Y + G L E + + + I+Y
Sbjct: 300 HDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVITYTT 359
Query: 305 MIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I L + A + E +GC ++ N +I + G+ + + R
Sbjct: 360 LISGLDRAGKIDAAIGTYDEMLRNGCKP-NLCTYNALIKLHGVRGKFPEMMAVFDDLRSA 418
Query: 364 GADPNAKTWEIFSDYYLRNG 383
G P+ TW + +NG
Sbjct: 419 GFVPDVVTWNTLLAVFGQNG 438
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 108/259 (41%), Gaps = 1/259 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY +L++C + + ++A + ++M+ + FNSL+ +Y K ++ +++EM
Sbjct: 251 TYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYGKARMHDEAIGVLKEM 310
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ P TYN + + + A + EEM+ G + D T++ L S AG
Sbjct: 311 ELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKG-IQPDVITYTTLISGLDRAGK 369
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+ A E+ +L Y LI L+G G E+ ++ LR A +++
Sbjct: 370 IDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAGFVPDVVTWNT 429
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
++ V FKE + + +I +Y++ G + + E+ +R G
Sbjct: 430 LLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSMEIYKRMIEAG 489
Query: 365 ADPNAKTWEIFSDYYLRNG 383
P+ T+ R G
Sbjct: 490 IYPDISTYNAVLSALARGG 508
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 94/243 (38%), Gaps = 43/243 (17%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV----NDISGAERVI 216
+ +L++ +++ A+ + M A+ I P TYNV + + + D+ ++
Sbjct: 181 YTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVVA---LV 237
Query: 217 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 276
+ MK DG + D T++ L S L+++A + E+ D + L+ +YG+
Sbjct: 238 DSMKNDG-IPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYGK 296
Query: 277 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 336
E I VL KE E G +
Sbjct: 297 ARMHDEA----------------------IGVL-------------KEMELGGCPPSVVT 321
Query: 337 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 396
N +I +Y K+G L+ A ELKE +G P+ T+ R G + A+ ++ +
Sbjct: 322 YNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVITYTTLISGLDRAGKIDAAIGTYDEML 381
Query: 397 DTG 399
G
Sbjct: 382 RNG 384
>gi|255661194|gb|ACU25766.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 426
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 123/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 6 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 65
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S PD YN + A +I EM+ G V D +++ L +++
Sbjct: 66 IFSRLKRSGFAPDLVAYNSMINVFXKAKLFREARSLINEMRTAG-VMPDTVSYTTLLTMH 124
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ +R
Sbjct: 125 VENKRFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGIEPNV 184
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ +++ G + A +K ++G
Sbjct: 245 MQNRGIEPNSITYSTIISIWVKVGKLDRAAMLFQKLRNSG 284
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 109/220 (49%), Gaps = 18/220 (8%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWVKVGKLDRAAML 276
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q+++ S + D Y + A ++ A+R++ E+KR + D T LA+
Sbjct: 277 FQKLRNSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD-TAIHILAA--- 332
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTA 298
AG E+A ++ + +D++ ++ LI L+ + S V ++ + R FP++
Sbjct: 333 -AGRLEEATWVFRQAIDAGEVKDITVFERLIHLFSKYKKYSNVVEVFDKMRERRYFPDS- 390
Query: 299 NISYLNMIQVLVN----LKDLPGAEKCFKEWES-GCATYD 333
N+I +++N L + A + E + GC D
Sbjct: 391 -----NVIALVLNAYGKLHEFEKANSVYMEMQDEGCIFSD 425
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 102/258 (39%), Gaps = 40/258 (15%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N ++Y +LL Y + +A L M+ N+ + + +NS+M +Y KT EK +I
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
QEM+ I P+S TY S + SI+V+
Sbjct: 243 QEMQNRGIEPNSITY------------------------------------STIISIWVK 266
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G ++A ++L N D YQ +I Y + G ++ R+ L+ NI
Sbjct: 267 VGKLDRAAMLFQKLRNSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 322
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
I +L L A F++ DI V +I ++K + N E+ ++ R
Sbjct: 323 RDTAIHILAAAGRLEEATWVFRQAIDAGEVKDITVFERLIHLFSKYKKYSNVVEVFDKMR 382
Query: 362 RRGADPNAKTWEIFSDYY 379
R P++ + + Y
Sbjct: 383 ERRYFPDSNVIALVLNAY 400
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 83/200 (41%), Gaps = 4/200 (2%)
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
++ PD YTY+ + A +++M++D RV D +SNL + + + K
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 307
A L+ DL AY +I ++ + E + +R A +SY ++
Sbjct: 63 AISIFSRLKRSGFAPDLVAYNSMINVFXKAKLFREARSLINEMRTAGVMPDTVSYTTLLT 122
Query: 308 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
+ V K A F E D+ N+MI Y + G + A++L R+ G +P
Sbjct: 123 MHVENKRFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGIEP 182
Query: 368 NAKTWEIFSDYYLRNGDMKL 387
N ++ Y GD +L
Sbjct: 183 NVVSYNTLLRVY---GDAEL 199
>gi|255661166|gb|ACU25752.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 426
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 121/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 6 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 65
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S PD YN + A +I EM+ G V + ++S L ++Y
Sbjct: 66 IFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAG-VTPNTASYSTLLTMY 124
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ +R
Sbjct: 125 VENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 245 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 284
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 107/217 (49%), Gaps = 12/217 (5%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML 276
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S + D Y + A V ++ A+R++ E+KR + D I
Sbjct: 277 FQKLRSSGVDIDQVLYQTMIVAYERVGLVAHAKRLLHELKRPDNIPRDIAI-----HILA 331
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + +D++ ++ +I L Y + GN+ EV+ R L FP++
Sbjct: 332 GAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGY-FPDS 390
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYD 333
I+ + + L + A + E E GC D
Sbjct: 391 XVIALV--LNAYGKLHEFDKANDVYMEMQEVGCVFSD 425
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 8/202 (3%)
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
++ PD YTY+ + A +++M++D RV D +SNL + + + K
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNM 305
A L+ DL AY +I ++G+ E + +R A PNTA SY +
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTA--SYSTL 120
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
+ + V K A F E D+ N+MI Y + G + A++L R+ G
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180
Query: 366 DPNAKTWEIFSDYYLRNGDMKL 387
+PN ++ Y GD +L
Sbjct: 181 EPNVVSYNTLLRVY---GDAEL 199
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 120/272 (44%), Gaps = 5/272 (1%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S N +TYG+L++ C++ KA L ++M E + + + + L+ + +
Sbjct: 190 SPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAES 249
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+ + M+ S ++P+ YTYN M + + A + EM DG + + TF L
Sbjct: 250 MFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDG-LLPNVVTFGILIDGL 308
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNT 297
+ A + L ++ + ++ Y LI Y + GNLSE + + P+
Sbjct: 309 CKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDV 368
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
+Y +I+ L + + A+ +E + + N +I Y KEG +E A E+
Sbjct: 369 --FTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVC 426
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 389
+ +G +PN T+ D Y + G M+ A+
Sbjct: 427 SQMTEKGIEPNIITFSTLIDGYCKAGKMEAAM 458
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 141/365 (38%), Gaps = 67/365 (18%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +T+G L++ CK A L M + + +N L+ Y K G+ + ++
Sbjct: 297 NVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLH 356
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG------------------ 223
E++ I+PD +TY++ ++ L V+ + A+ +++EMK+ G
Sbjct: 357 SEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKE 416
Query: 224 -------RVAADWT---------TFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAY 267
V + T TFS L Y +AG E A E+ + D+ AY
Sbjct: 417 GNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAY 476
Query: 268 QFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPGAEKCF--- 322
LI + + GN E +R+ + ++ A PN +S L I L + A K F
Sbjct: 477 TALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCL--IDGLCKDGRISDAIKLFLAK 534
Query: 323 ----------KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
E + + + + +I +GR+ A + R G P+ T
Sbjct: 535 TGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTC 594
Query: 373 EI-----FSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVD 427
+ F +LR+ M L D L+ I +P+S R + +E+ +
Sbjct: 595 IVIIQGHFRAMHLRD-VMMLQADILKMGI----------IPNSSVYRVLAKGYEESGYLK 643
Query: 428 GAEGF 432
A F
Sbjct: 644 SALSF 648
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 59/307 (19%), Positives = 115/307 (37%), Gaps = 13/307 (4%)
Query: 162 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 221
N ++ K G + + + +M A P+ TY + D A R+ +EM
Sbjct: 162 NMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMI- 220
Query: 222 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 281
+ ++ ++ L +AE + + N +L Y ++ Y + ++
Sbjct: 221 EKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVK 280
Query: 282 EVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 339
+ ++ + PN L I L ++ A K + S +I V N
Sbjct: 281 KALELYXEMLGDGLLPNVVTFGIL--IDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNC 338
Query: 340 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+I Y K G L A L + P+ T+ I M+ A L++ G
Sbjct: 339 LIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKG 398
Query: 400 RGDGGKWVPSSETIRTFMRHFEQEKDVDGA-EGFLEILKKAVDDLGVEVFEPLIRTYAAA 458
++P++ T T + + +E +++ A E ++ +K ++ + F LI Y A
Sbjct: 399 ------FLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEP-NIITFSTLIDGYCKA 451
Query: 459 GRTSPVM 465
G+ M
Sbjct: 452 GKMEAAM 458
>gi|255661136|gb|ACU25737.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 426
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 121/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 6 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 65
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S PD YN + A +I EM+ G V + ++S L ++Y
Sbjct: 66 IFSRLKRSGFTPDIVAYNAMINVFGKAKLFREARSLISEMRTAG-VTPNTASYSTLLTMY 124
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ +R
Sbjct: 125 VENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 245 MQNRGIEPNSITYSTIISIWSKVGKLDRAAMLFQKLRSSG 284
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 110/221 (49%), Gaps = 20/221 (9%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ +++++++++K G ++ +
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWSKVGKLDRAAML 276
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S + D Y + A ++ A+R++ E+KR + D I V
Sbjct: 277 FQKLRSSGVDIDQVLYQTMIVAYEKAGLVAHAKRLLHELKRPDNIPRDIAI-----HILV 331
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + +D++ ++ +I L Y + GN+ EV+ L FP++
Sbjct: 332 GAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMCGLGY-FPDS 390
Query: 298 ANISYLNMIQVLVN----LKDLPGAEKCFKEW-ESGCATYD 333
N+I +++N L + A + E E GC D
Sbjct: 391 ------NVIALILNAYGKLHEFDKANDVYMEMQEVGCVFSD 425
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 8/202 (3%)
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
++ PD YTY+ + A +++M++D RV D +SNL + + + K
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNM 305
A L+ D+ AY +I ++G+ E + +R A PNTA SY +
Sbjct: 63 AISIFSRLKRSGFTPDIVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTA--SYSTL 120
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
+ + V K A F E D+ N+MI Y + G + A++L R+ G
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180
Query: 366 DPNAKTWEIFSDYYLRNGDMKL 387
+PN ++ Y GD +L
Sbjct: 181 EPNVVSYNTLLRVY---GDAEL 199
>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
Length = 1139
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 139/325 (42%), Gaps = 3/325 (0%)
Query: 62 LKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS- 120
+ +LR ++L A L+ + GM V +D + K + D A+ F ++
Sbjct: 310 IDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGL 369
Query: 121 -KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
N +TY L++ CK M E A L +KM++ + + P+NSL+ Y K G ++
Sbjct: 370 EPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARG 429
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
++ M + P + +Y+ + L D+S + EM G +A + TF+ L + +
Sbjct: 430 LLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERG-IAWNNYTFTALINGF 488
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
+ ++A R ++ + N + + +I Y GN+ + ++++ + N
Sbjct: 489 CKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDN 548
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+Y ++I L + A + + E+ A + ++ + +EGR L +
Sbjct: 549 YTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDE 608
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGD 384
RG + ++ I L+ D
Sbjct: 609 MAVRGVKLDLVSFTIIVYAALKQHD 633
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 124/279 (44%), Gaps = 2/279 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N+ T+ +L+N +CK+ ++A L +KM + N+ + + FN ++ Y G+ K +
Sbjct: 477 NNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLY 536
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+M + PD+YTY + L + +S A + +++ V +++ + L + E
Sbjct: 537 DQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFRE 596
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G F + E+ R DL ++ ++ + + + ++R ++ +I
Sbjct: 597 -GRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIF 655
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y MI L +++ A C+ + + + V+I K G L +AE L +
Sbjct: 656 YTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEML 715
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 400
PN T+ F DY+ GDM+ A D L A+ G
Sbjct: 716 AGNVLPNKFTYNCFLDYFATEGDMEKAKD-LHSAMLQGH 753
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/340 (20%), Positives = 131/340 (38%), Gaps = 17/340 (5%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
Y + + YC+ + A L+ +M+ + S++P+N LM K ++ + M
Sbjct: 200 VYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVM 259
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ D TY + + ++ A R+ +M R G V ++ S + + L
Sbjct: 260 VNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSE-ANCSFMIDELRKKEL 318
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISY 302
E+A +L + ++ AY LI + + R+++ + R PN ++Y
Sbjct: 319 VEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPN--EVTY 376
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+I L + A F + + N +I Y K+G L+ A L +
Sbjct: 377 AILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVK 436
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ 422
G P A ++ RNGD+ C+E + G W ++ T + F +
Sbjct: 437 EGLTPTAASYSPLIAGLCRNGDLS---SCMELHREMAE-RGIAW--NNYTFTALINGFCK 490
Query: 423 EKDVDGAEGFLEILKKAVDDLGVE---VFEPLIRTYAAAG 459
+K +D A + K +D + F +I Y G
Sbjct: 491 DKKMDEAA---RLFDKMIDSNVIPNEVTFNVMIEGYCLVG 527
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 12/173 (6%)
Query: 103 VQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFN 162
+Q ++ + VD S N +T+ L+N CK AE L ++M N+ + +N
Sbjct: 670 IQALNCWDQMVVD--GYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYN 727
Query: 163 SLMTLYAKTGHPEKI----PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 218
+ +A G EK A++Q AS + ++N+ ++ L I A ++ +
Sbjct: 728 CFLDYFATEGDMEKAKDLHSAMLQGHLASIV-----SFNILIKGLCKAGKIQEAIDLMSK 782
Query: 219 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 271
+ G + D ++S + + G KA E+ + D+ AY I
Sbjct: 783 ITESG-FSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFI 834
>gi|410110073|gb|AFV61116.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
virgata]
Length = 424
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 121/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 13 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 72
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S PD YN + A +I EM+ G V + ++S L ++Y
Sbjct: 73 IFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAG-VMPNTASYSTLLTMY 131
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ +R
Sbjct: 132 VENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 191
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 192 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQE 251
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 252 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 291
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 91/211 (43%), Gaps = 8/211 (3%)
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+ EM+ ++ PD YTY+ + A +++M++D RV D +SNL +
Sbjct: 2 GLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIEL 60
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPN 296
+ + KA L+ DL AY +I ++G+ E + +R A PN
Sbjct: 61 SRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPN 120
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
TA SY ++ + V K A F E D+ N+MI Y + G + A++L
Sbjct: 121 TA--SYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 178
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDMKL 387
R+ G +PN ++ Y GD +L
Sbjct: 179 FWGMRKMGIEPNVVSYNTLLRVY---GDAEL 206
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 129/314 (41%), Gaps = 19/314 (6%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +Y +LL Y + +A ++ +M+E+ N ++ +Y + G ++ +
Sbjct: 120 NTASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 179
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M+ I P+ +YN +R A + M+R + + T++++ IY +
Sbjct: 180 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN-IVQNVVTYNSMMMIYGK 238
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
EKA ++E++NR + Y +I+++G+ G L +++ LR + +
Sbjct: 239 TLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVL 298
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y M + A++ E +S +++ GA GR+E A + +A
Sbjct: 299 YQTMXVAYERAGLVAHAKRLLHELKSPDNIPRDTAIHILAGA----GRIEEATYVFRQAI 354
Query: 362 RRGADPNAKTWE----IFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 417
G + +E +FS Y K + +E D RG G + P S I +
Sbjct: 355 DAGEVKDITVFERMIHLFSKY-------KKYANVIE-VFDKMRGLG--YFPDSNVIALVL 404
Query: 418 RHFEQEKDVDGAEG 431
+ + + D A G
Sbjct: 405 NAYGKLHEFDKANG 418
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 99/194 (51%), Gaps = 15/194 (7%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 224 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML 283
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S + D Y A ++ A+R++ E+K + D T LA
Sbjct: 284 FQKLRSSGVEIDQVLYQTMXVAYERAGLVAHAKRLLHELKSPDNIPRD-TAIHILAG--- 339
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + +D++ ++ +I L Y + N+ EV+ R L FP++
Sbjct: 340 -AGRIEEATYVFRQAIDAGEVKDITVFERMIHLFSKYKKYANVIEVFDKMRGLGY-FPDS 397
Query: 298 ANISYLNMIQVLVN 311
N+I +++N
Sbjct: 398 ------NVIALVLN 405
>gi|410110137|gb|AFV61148.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
rubella]
Length = 440
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 121/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 12 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 71
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S PD YN + A +I EMK G V + T++S L ++Y
Sbjct: 72 IFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAG-VMPNTTSYSTLLTMY 130
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ E +++ +R +
Sbjct: 131 VENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLSMAKEADKLFWGMRKMGIEPSV 190
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+S+ +++V + + A F+ + + N MI Y K E A L +
Sbjct: 191 VSFNTLLRVYGDAELFGEAIHLFRLMQRKNIEQTVVTYNSMIMIYGKTLEHEKANNLIQE 250
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 251 MQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 290
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 109/218 (50%), Gaps = 20/218 (9%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY S++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ + Q+
Sbjct: 226 VTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQK 285
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
+++S + D + + A ++ A+R++ E+KR + D T LA AG
Sbjct: 286 LRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD-TAIHILAG----AG 340
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNTANI 300
E+A ++ + +D++ ++ +I L Y + N+ EV+ R L FP++
Sbjct: 341 RIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGY-FPDS--- 396
Query: 301 SYLNMIQVLVN----LKDLPGAEKCFKEW-ESGCATYD 333
N+I V++N L++ A + E E GC D
Sbjct: 397 ---NVIAVVLNAYGKLQEFDKANDVYMEMQEVGCVFSD 431
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 107/255 (41%), Gaps = 15/255 (5%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+++ +LL Y + +A L M+ N+ + + +NS++ +Y KT EK +IQE
Sbjct: 191 VSFNTLLRVYGDAELFGEAIHLFRLMQRKNIEQTVVTYNSMIMIYGKTLEHEKANNLIQE 250
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M++ I P+S TY+ + V + A + ++++ G V D F + Y AG
Sbjct: 251 MQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG-VEIDQILFQTMIVAYERAG 309
Query: 244 LFEKAERALKELEN-RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY 302
L A+R L EL+ N RD + I + G + E ++R A +
Sbjct: 310 LVAHAKRLLHELKRPDNIPRDTA-----IHILAGAGRIEEATYVFRQAIDAGEVKDITVF 364
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
MI +L K + F + D V V++ AY K + A ++ +
Sbjct: 365 ERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVYMEMQE 424
Query: 363 RGADPNAKTWEIFSD 377
G +FSD
Sbjct: 425 VGC--------VFSD 431
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 8/211 (3%)
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+ EM+ ++ PD YTY+ + A +++M++D RV D +SNL +
Sbjct: 1 GLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIEL 59
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPN 296
+ + KA L+ DL AY +I ++G+ E + ++ A PN
Sbjct: 60 SRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPN 119
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
T SY ++ + V K A F E D+ N+MI Y + + A++L
Sbjct: 120 TT--SYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLSMAKEADKL 177
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDMKL 387
R+ G +P+ ++ Y GD +L
Sbjct: 178 FWGMRKMGIEPSVVSFNTLLRVY---GDAEL 205
>gi|302769103|ref|XP_002967971.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
gi|300164709|gb|EFJ31318.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
Length = 1354
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 145/352 (41%), Gaps = 45/352 (12%)
Query: 90 VSDQAIHLDLVA---KVQGIDAAENYFVDLPET--SKNHLTYGSLLNCYCKELMTEKAEA 144
V D A+H+ ++A K++ AE F DL + N Y +LL+ Y + E+A
Sbjct: 632 VKDSAMHVAIIASYGKLKLWQNAEIVFRDLQRHGFAGNTSAYSALLSAYAETGNFERATR 691
Query: 145 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 204
L+ M L ++ N ++ + + G +++ Q + I P+S T+ V A +
Sbjct: 692 ALDNMVAAGLQPNAACANYVLEAFGRAGKAKELSEFYQRLPEMGITPNSRTFVVIFHAFS 751
Query: 205 AVNDIS-----------------------------------GAERVIEEMKRDGRVAADW 229
++ AE +++++K+ G + D
Sbjct: 752 RNGNLEEARSMYRQMREAGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAG-LELDM 810
Query: 230 TTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS 289
++++ S+Y + G + KA K ++ D + + LI LY + + E + R
Sbjct: 811 DIYNHMISLYSKLGSYRKAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLRE 870
Query: 290 LRLAFPNTANIS-YLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKE 347
+ + N NIS Y +I L+ AE FK E+GC D NVMI Y K
Sbjct: 871 M-IKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAETGCKP-DATAYNVMINVYRKA 928
Query: 348 GRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
G EE+ E+ + G +P+ T + D Y + G A + LE + G
Sbjct: 929 GEHRKIEEVIEQMKADGFEPSLTTIHMLMDSYGKGGATGKAEEVLETLPEIG 980
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 124/293 (42%), Gaps = 40/293 (13%)
Query: 94 AIHLDLVAKVQGIDAAENYFVDLPETSKNHLT--YGSLLNCYCKELMTEKAEALLEKMKE 151
A+ L ++ + A+ F D E+S + Y SL++ Y + + LL +M++
Sbjct: 84 AVMLSVLGRANQPGLAQELF-DRAESSIGNCVQVYNSLMSVYARHGDWNSVQQLLCRMQD 142
Query: 152 LNLGFSSMPFNSLMTLYAKTGHPEKIPA-IIQEMKASSIMPDSYTYNVWMRALAAVNDIS 210
+ FN ++ + G E + + ++Q++ A+ + PD+ TYN + A + N +S
Sbjct: 143 RGCRPDLVTFNIVIKARTRGGMQEGLASSLLQDVYAAGLRPDTITYNTLISACSLNNRLS 202
Query: 211 GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 270
A + EEM+R G W T++ + S+Y AG E A + ++ + D Y +
Sbjct: 203 DAILIFEEMQRQGCDPDIW-TYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSV 261
Query: 271 ITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCA 330
+ + + G + EV RI +R A ++ I+Y
Sbjct: 262 LHAFARDGRIEEVERIRGMMRDARCSSDEITY---------------------------- 293
Query: 331 TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
N MI Y K G AEEL + + G P++ T+ + D + G
Sbjct: 294 -------NTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAG 339
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 103/258 (39%), Gaps = 36/258 (13%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +L++ A + E+M+ +N+++++Y + G E +I +
Sbjct: 186 ITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRI 245
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ PD+ TYN + A A I ER I M RD R ++D T++ + +Y +AG
Sbjct: 246 MQEQGFTPDAVTYNSVLHAFARDGRIEEVER-IRGMMRDARCSSDEITYNTMIHMYGKAG 304
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
+ KAE +++ D + LI G+ G F N A +
Sbjct: 305 MHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAG---------------FVNEAAAMFE 349
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+M++ V P ++ + MI AYAK +AE R
Sbjct: 350 DMLKSQVR----P----------------TLQAFSAMICAYAKADMFSDAEHTYSCMLRA 389
Query: 364 GADPNAKTWEIFSDYYLR 381
G P+ + + D + +
Sbjct: 390 GVRPDLLAYSVMLDVFFK 407
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/326 (20%), Positives = 137/326 (42%), Gaps = 3/326 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A + +NM G+ + L+ + ++ LPE + N T+ + +
Sbjct: 689 ATRALDNMVAAGLQPNAACANYVLEAFGRAGKAKELSEFYQRLPEMGITPNSRTFVVIFH 748
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ + E+A ++ +M+E S F +L+ LY++ +++++K + +
Sbjct: 749 AFSRNGNLEEARSMYRQMREAGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLEL 808
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D YN + + + A V + M+ G + D TTF+ L +Y + ++A+
Sbjct: 809 DMDIYNHMISLYSKLGSYRKAALVFKGMQEIG-CSPDATTFNTLIMLYSRNQMVQEAQAL 867
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
L+E+ ++S Y LI+ YG+ + +++S+ +Y MI V
Sbjct: 868 LREMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRK 927
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+ E+ ++ ++ + ++++ +Y K G AEE+ E G P+A
Sbjct: 928 AGEHRKIEEVIEQMKADGFEPSLTTIHMLMDSYGKGGATGKAEEVLETLPEIGMSPDAIH 987
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAID 397
+ + +L N D AV L K D
Sbjct: 988 YTSIINSHLNNKDYLSAVIWLRKMTD 1013
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 93/203 (45%), Gaps = 3/203 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLN 131
A+ + E M+++G + + + + + ++AA + F + E + + +TY S+L+
Sbjct: 204 AILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLH 263
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ ++ E+ E + M++ + +N+++ +Y K G K + +MK P
Sbjct: 264 AFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCP 323
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
DS T+ V + L ++ A + E+M + +V FS + Y +A +F AE
Sbjct: 324 DSVTFTVLIDTLGKAGFVNEAAAMFEDMLKS-QVRPTLQAFSAMICAYAKADMFSDAEHT 382
Query: 252 LKELENRNAHRDLSAYQFLITLY 274
+ DL AY ++ ++
Sbjct: 383 YSCMLRAGVRPDLLAYSVMLDVF 405
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 97/219 (44%), Gaps = 5/219 (2%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y +++ Y K KA + + M+E+ + FN+L+ LY++ ++ A+++EM
Sbjct: 813 YNHMISLYSKLGSYRKAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMI 872
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
+ P+ TY + A + AE V + + G D T ++ + ++Y +AG
Sbjct: 873 KTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAETG-CKPDATAYNVMINVYRKAGEH 931
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
K E +++++ L+ L+ YG+ G + + +L + I Y ++
Sbjct: 932 RKIEEVIEQMKADGFEPSLTTIHMLMDSYGKGGATGKAEEVLETLPEIGMSPDAIHYTSI 991
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAY 344
I +N KD A ++ C +R T+V I +
Sbjct: 992 INSHLNNKDYLSAVIWLRKMTDAC----VRPTHVTITCF 1026
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 105/248 (42%), Gaps = 13/248 (5%)
Query: 212 AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 271
AE V +++R G A + + +S L S Y E G FE+A RAL + + + +++
Sbjct: 654 AEIVFRDLQRHG-FAGNTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNAACANYVL 712
Query: 272 TLYGQTGN---LSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESG 328
+G+ G LSE Y+ + + PN+ +++ + +L A +++
Sbjct: 713 EAFGRAGKAKELSEFYQRLPEMGIT-PNSR--TFVVIFHAFSRNGNLEEARSMYRQMREA 769
Query: 329 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 388
+ I+V ++ Y++E +AEEL + ++ G + + + Y + G + A
Sbjct: 770 GFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDMDIYNHMISLYSKLGSYRKA 829
Query: 389 VDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVF 448
+ + G P + T T + + + + V A+ L + K + + +
Sbjct: 830 ALVFKGMQEIGCS------PDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTY 883
Query: 449 EPLIRTYA 456
LI Y
Sbjct: 884 TTLISAYG 891
>gi|302768505|ref|XP_002967672.1| hypothetical protein SELMODRAFT_88400 [Selaginella moellendorffii]
gi|300164410|gb|EFJ31019.1| hypothetical protein SELMODRAFT_88400 [Selaginella moellendorffii]
Length = 717
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 85/175 (48%), Gaps = 2/175 (1%)
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEAL--LEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
+ + N +TY +LL C +T+ AL +E MKE + + +N+L+ Y + G E
Sbjct: 423 KVAANVVTYNTLLQGVCVFPITDMKRALEIVEDMKEAGVELDVVSYNTLINGYLEAGDNE 482
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
+ A+ M+ + + TY M+A A +V +M D RV D ++ L
Sbjct: 483 QALAVFTRMREAKVPASKVTYGTLMKAFARSGRTELVVKVFTQMALDPRVRVDVVAWNTL 542
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
Y AGL + A RAL+++++R + Y L+ YG++ N ++ +W+ +
Sbjct: 543 IDAYARAGLEQDATRALEDMKSRGFSPTNATYNTLVKTYGRSRNFGQLILLWKEI 597
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/404 (20%), Positives = 161/404 (39%), Gaps = 51/404 (12%)
Query: 97 LDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNL 154
L+ A + ++ AE + +P N LT+ ++ Y + +K E +L M + ++
Sbjct: 238 LNACANIGNLERAEQLWELMPAFGVKANTLTFNVMIKLYARVEKLDKLEQILHTMADADV 297
Query: 155 GFSSMPFNSLMTLYAKTG-----------------HPEKIPAIIQEMKASS--IMPDSYT 195
+ FNSL+ + G H +++PA++ +++ S PD T
Sbjct: 298 DPDATTFNSLVAAFVGLGELSLAESIVQSLRGEGEHQKRVPALLPKLREHSAKFQPDVRT 357
Query: 196 YNVWMRALAAVNDISGAERVIEEMKRDGRVAA--DWTTFSNLASIYVEAGLFEKAERALK 253
Y M+ N +S A +++ M+++ AA + TF+ + GL ++A L+
Sbjct: 358 YTTLMKGYVQHNRVSDAMQLLVAMQQEKTSAAMPNEVTFTTAIRACAKMGLLDEARVILQ 417
Query: 254 ELENRNAHRDLSAYQFL---ITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
E+ + ++ Y L + ++ T ++ I ++ A +SY +I +
Sbjct: 418 EMATQKVAANVVTYNTLLQGVCVFPIT-DMKRALEIVEDMKEAGVELDVVSYNTLINGYL 476
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
D A F ++ A+A+ GR E ++ + DP +
Sbjct: 477 EAGDNEQALAVFTRMREAKVPASKVTYGTLMKAFARSGRTELVVKVFTQM---ALDPRVR 533
Query: 371 T----WEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDV 426
W D Y R G + A LE G + P++ T T ++ + + ++
Sbjct: 534 VDVVAWNTLIDAYARAGLEQDATRALEDMKSRG------FSPTNATYNTLVKTYGRSRNF 587
Query: 427 DGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLK 470
G L +L K ++ VE +AA R P+++ LK
Sbjct: 588 ----GQLILLWKEINARSVE-------EDSAAVRDKPLVVGALK 620
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 127/282 (45%), Gaps = 9/282 (3%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
+ N +TY +L + CK + A LL +M L + +NSL+ K G+ ++
Sbjct: 360 TPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVK 419
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
++++M+ + PD+ TY M A ++ A ++ +M D + TF+ L + +
Sbjct: 420 LMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQM-LDRELQPTVVTFNVLMNGF 478
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFP-- 295
+G+ E E+ LK + + + + Y LI Y N+ I+R + + P
Sbjct: 479 CMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDG 538
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEE 355
NT NI +I+ +++ A ++ + N +I + K + A E
Sbjct: 539 NTYNI----LIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARE 594
Query: 356 LKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
L E+ RR G + + + IF+D G M+L ++ ++AI+
Sbjct: 595 LFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIE 636
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 135/314 (42%), Gaps = 11/314 (3%)
Query: 145 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 204
L+E+M+ L + +N ++ L KTG + +++EM + I PD Y +
Sbjct: 210 LIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFC 269
Query: 205 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 264
+ ++S A R+ +EM++ +++ D+ T++ + + G +A++ E+ + D
Sbjct: 270 KLGNVSSAYRLFDEMQKR-KISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDE 328
Query: 265 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI-SYLNMIQVLVNLKDLPGAEKCFK 323
Y LI Y + G + E + + + L T NI +Y + L ++ A +
Sbjct: 329 VTYTALIDGYCKEGKMKEAFSLHNQM-LQMGLTPNIVTYTALADGLCKCGEVDTANELLH 387
Query: 324 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
E +I N ++ K G ++ A +L + G P+A T+ D Y ++
Sbjct: 388 EMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSR 447
Query: 384 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE-ILKKAVDD 442
+M A + L + +D + P+ T M F ++ E L+ +L+K +
Sbjct: 448 EMVRAHELLRQMLDR------ELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMP 501
Query: 443 LGVEVFEPLIRTYA 456
+ LI+ Y
Sbjct: 502 -NATTYNSLIKQYC 514
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 118/288 (40%), Gaps = 13/288 (4%)
Query: 175 EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSN 234
E + +I+EM+ + P+ YTYN + L ++ AERV+ EM +G +A D ++
Sbjct: 205 EWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEG-IAPDGVIYTT 263
Query: 235 LASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF 294
L + + G A R E++ R D Y +I QTG + E +++ +
Sbjct: 264 LIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKR 323
Query: 295 PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAE 354
++Y +I + A + T +I + K G ++ A
Sbjct: 324 LEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTAN 383
Query: 355 ELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIR 414
EL R+G + N T+ + + G++ AV ++ G + P + T
Sbjct: 384 ELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAG------FHPDAVTYT 437
Query: 415 TFMRHFEQEKDVDGAEGFLEILKKAVD---DLGVEVFEPLIRTYAAAG 459
T M + + +++ A E+L++ +D V F L+ + +G
Sbjct: 438 TLMDAYCKSREMVRAH---ELLRQMLDRELQPTVVTFNVLMNGFCMSG 482
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/296 (18%), Positives = 116/296 (39%), Gaps = 35/296 (11%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N TY ++ CK +AE +L +M + + + +L+ + K G+ +
Sbjct: 222 NPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLF 281
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM--KR------------DGR--- 224
EM+ I PD TY + L + A+++ EM KR DG
Sbjct: 282 DEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKE 341
Query: 225 -----------------VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAY 267
+ + T++ LA + G + A L E+ + ++ Y
Sbjct: 342 GKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTY 401
Query: 268 QFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES 327
L+ + GN+ + ++ + + +A + ++Y ++ +++ A + ++
Sbjct: 402 NSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLD 461
Query: 328 GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW-EIFSDYYLRN 382
+ NV++ + G LE+ E+L + +G PNA T+ + Y +RN
Sbjct: 462 RELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRN 517
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 99/221 (44%), Gaps = 5/221 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNH---LTYGSLL 130
A +L M ++G+ + ++ + K ID A D+ E + H +TY +L+
Sbjct: 382 ANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDM-EVAGFHPDAVTYTTLM 440
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
+ YCK +A LL +M + L + + FN LM + +G E +++ M IM
Sbjct: 441 DAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIM 500
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
P++ TYN ++ N++ + M G V D T++ L + +A ++A
Sbjct: 501 PNATTYNSLIKQYCIRNNMRATTEIYRGMCAKG-VVPDGNTYNILIKGHCKARNMKEAWF 559
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 291
+++ + + +S+Y LI + + E ++ +R
Sbjct: 560 LHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMR 600
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 111/273 (40%), Gaps = 1/273 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +Y L++ + +A + +M L S +++LM K E + ++
Sbjct: 191 NAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLL 250
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+EM+ + P+ YT+ + +R L I A + M +G D T++ L
Sbjct: 251 KEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEG-CGPDLVTYTVLIDALCN 309
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
AG E A+ +++ D Y L+ + G+L W + ++
Sbjct: 310 AGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVT 369
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
+ ++ VL +D A F ++ N +I + GR+E+A +L +
Sbjct: 370 FTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTME 429
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
G P A T+ F DY+ ++G+ AV+ EK
Sbjct: 430 SVGVQPTAYTYITFIDYFGKSGETGKAVETFEK 462
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 109/250 (43%), Gaps = 13/250 (5%)
Query: 131 NCYCKELM----TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKA 186
NC EL+ TEKA L + MK + + FN L+ ++ K+G ++ + +EM +
Sbjct: 792 NCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMIS 851
Query: 187 SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADW----TTFSNLASIYVEA 242
PD+ TYN+ + +LA N++ A ++ V++D+ T+ L +
Sbjct: 852 RRCKPDAITYNIVISSLAKSNNLDKALDFFYDL-----VSSDFRPTPRTYGPLIDGLAKV 906
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY 302
G E+A R +E+ + + + + LI YG+ G+ ++++ + SY
Sbjct: 907 GRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSY 966
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
++ L + A F E +S D N +I K R+E A L R
Sbjct: 967 TILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRN 1026
Query: 363 RGADPNAKTW 372
RG P+ T+
Sbjct: 1027 RGIVPDLYTY 1036
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/356 (19%), Positives = 142/356 (39%), Gaps = 16/356 (4%)
Query: 92 DQAIHLDLVAKVQG---IDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALL 146
DQ I++ L+ K +D + ++ + + +T+ L++ CK ++A A
Sbjct: 331 DQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATF 390
Query: 147 EKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV 206
+ M++ + + +N+L+ + G E ++ M++ + P +YTY ++
Sbjct: 391 DVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKS 450
Query: 207 NDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSA 266
+ A E+MK G V ++L S+ E G +A+ L D
Sbjct: 451 GETGKAVETFEKMKAKGIVPNIVACNASLYSL-AEMGRLREAKTMFNGLRENGLAPDSVT 509
Query: 267 YQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE 326
Y ++ Y + G + E + + I ++I L + A + F +
Sbjct: 510 YNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMK 569
Query: 327 SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 386
+ + N ++ KEGR++ A EL E + PN ++ D + +N +++
Sbjct: 570 DMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVE 629
Query: 387 LAVDCLEK--AIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 440
LA+ K +D P T T + +E V+ A F LKK++
Sbjct: 630 LALKMFSKMTVMDCK--------PDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSM 677
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 3/201 (1%)
Query: 95 IHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKEL 152
I + +AK +D A ++F DL + TYG L++ K E+A L E+M +
Sbjct: 863 IVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDY 922
Query: 153 NLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA 212
+ FN L+ Y K G E + + M I PD +Y + + L + A
Sbjct: 923 GCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEA 982
Query: 213 ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLIT 272
E+K G + D+ ++ + + ++ E+A E+ NR DL Y L+
Sbjct: 983 LYYFNELKSTG-LDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLML 1041
Query: 273 LYGQTGNLSEVYRIWRSLRLA 293
G G + + R++ L+LA
Sbjct: 1042 NLGLAGMVEQAKRMYEELQLA 1062
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 85/190 (44%), Gaps = 4/190 (2%)
Query: 212 AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 271
A ++ ++ + ++ +++ L +E EKA K+++N D + L+
Sbjct: 771 AYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLL 830
Query: 272 TLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGC 329
++G++G ++E++ +++ + R P+ I+Y +I L +L A F + S
Sbjct: 831 AVHGKSGKITELFELYKEMISRRCKPDA--ITYNIVISSLAKSNNLDKALDFFYDLVSSD 888
Query: 330 ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 389
R +I AK GRLE A L E G PN + I + Y + GD + A
Sbjct: 889 FRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETAC 948
Query: 390 DCLEKAIDTG 399
++ ++ G
Sbjct: 949 QLFKRMVNEG 958
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 86/194 (44%), Gaps = 3/194 (1%)
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
K I P +YN + L V+ A + ++MK G A D TF+ L +++ ++G
Sbjct: 780 KKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVG-CAPDAFTFNMLLAVHGKSGK 838
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+ KE+ +R D Y +I+ ++ NL + + L + +Y
Sbjct: 839 ITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGP 898
Query: 305 MIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I L + L A + F+E + GC + + N++I Y K G E A +L +R
Sbjct: 899 LIDGLAKVGRLEEAMRLFEEMSDYGCKP-NCAIFNILINGYGKIGDTETACQLFKRMVNE 957
Query: 364 GADPNAKTWEIFSD 377
G P+ K++ I D
Sbjct: 958 GIRPDLKSYTILVD 971
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 2/152 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
A +L + M G+ + I +D + +D A YF +L T + + Y ++N
Sbjct: 947 ACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIIN 1006
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
K E+A AL +M+ + +NSLM G E+ + +E++ + + P
Sbjct: 1007 GLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEP 1066
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
D +TYN +R + + A V + M DG
Sbjct: 1067 DVFTYNALIRGYSLSENPEHAYTVYKNMMVDG 1098
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 81/186 (43%), Gaps = 6/186 (3%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP-ETSKNHL-TYGSLLN 131
A++L E M G + I ++ K+ + A F + E + L +Y L++
Sbjct: 912 AMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVD 971
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C C ++A ++K L + +N ++ K+ E+ A+ EM+ I+P
Sbjct: 972 CLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVP 1031
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D YTYN M L + A+R+ EE++ G + D T++ L Y L E E A
Sbjct: 1032 DLYTYNSLMLNLGLAGMVEQAKRMYEELQLAG-LEPDVFTYNALIRGY---SLSENPEHA 1087
Query: 252 LKELEN 257
+N
Sbjct: 1088 YTVYKN 1093
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 132/358 (36%), Gaps = 45/358 (12%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLN 131
A+ L M + G V +D + K +D A F + + S +TY +LL+
Sbjct: 526 AVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLS 585
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
KE +KA L E M +++ FN+L+ + K E + +M P
Sbjct: 586 GLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKP 645
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D TYN + L N ++ A ++K+ + D T L V+ G A
Sbjct: 646 DVLTYNTVIYGLIKENKVNHAFWFFHQLKKS--MHPDHVTICTLLPGLVKCGQIGDAISI 703
Query: 252 LKELE-------NRNAHRDLSAYQFL-------------ITLYGQTGNLSEVYRIWRSL- 290
++ NR+ DL + + L G S + + R L
Sbjct: 704 ARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLC 763
Query: 291 -----------------RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES-GCATY 332
+L T SY +I L+ + A FK+ ++ GCA
Sbjct: 764 KHKRELYAYQIFDKFTKKLGISPTL-ASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAP- 821
Query: 333 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
D N+++ + K G++ EL + R P+A T+ I ++ ++ A+D
Sbjct: 822 DAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALD 879
>gi|410110069|gb|AFV61114.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
lycioides]
Length = 429
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 121/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 8 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 67
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S PD YN + A +I EM+ G V + ++S L ++Y
Sbjct: 68 IFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAG-VMPNTASYSTLLTMY 126
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ +R
Sbjct: 127 VENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 186
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 187 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQE 246
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 247 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 286
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 8/207 (3%)
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
EM+ ++ PD YTY+ + A +++M++D RV D +SNL + +
Sbjct: 1 EMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIELSRKL 59
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANI 300
+ KA L+ DL AY +I ++G+ E + +R A PNTA
Sbjct: 60 CDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTA-- 117
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
SY ++ + V K A F E D+ N+MI Y + G + A++L
Sbjct: 118 SYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM 177
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKL 387
R+ G +PN ++ Y GD +L
Sbjct: 178 RKMGIEPNVVSYNTLLRVY---GDAEL 201
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 109/221 (49%), Gaps = 20/221 (9%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 219 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML 278
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S + D Y + A ++ A+R++ E+K + D T LA
Sbjct: 279 FQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKSPDNIPRD-TAIHILAG--- 334
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + +D++ ++ +I L Y + N+ EV+ R L FP++
Sbjct: 335 -AGRIEEATYVFRQAIDAGEVKDITVFERMIHLFSKYKKYANVVEVFDKMRGLGY-FPDS 392
Query: 298 ANISYLNMIQVLVN----LKDLPGAEKCFKEW-ESGCATYD 333
N+I +++N L + A + E E GC D
Sbjct: 393 ------NVIALVLNAYGKLHEFDKANGVYMEMQEVGCVFSD 427
>gi|224142151|ref|XP_002324422.1| predicted protein [Populus trichocarpa]
gi|222865856|gb|EEF02987.1| predicted protein [Populus trichocarpa]
Length = 453
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 124/265 (46%), Gaps = 5/265 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ + + S++N + + ++A L KMKE ++ FN+L+ Y G E+ ++
Sbjct: 82 DSILFNSIINAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKTEEALKLL 141
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+ ++ + P+ TYN+ +RA ++ A ++ +M G + D T++ LA Y E
Sbjct: 142 EFLQDGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMVASG-MQPDAVTYNTLARAYAE 200
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR-IWRSLRLA-FPNTAN 299
G +AE + E+ NR + ++ Y + GN+ + R ++R L PN
Sbjct: 201 KGETIRAEEMILEMLNRRVTPNERTCSIIVNGYCKEGNMVDASRFVFRMKELGVLPNL-- 258
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+ ++I+ ++ D G ++ E D+ + ++ A++ GR++ +E+
Sbjct: 259 FVFNSLIKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFSTIMNAWSSAGRMDKCKEIFND 318
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGD 384
+ +P+ + I + Y+R G+
Sbjct: 319 MVKAEIEPDIHAFSILAKGYVRAGE 343
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 78/172 (45%), Gaps = 1/172 (0%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
+ N T ++N YCKE A + +MKEL + + FNSL+ + T E +
Sbjct: 219 VTPNERTCSIIVNGYCKEGNMVDASRFVFRMKELGVLPNLFVFNSLIKGFLDTMDTEGVD 278
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
++ M+ + + PD T++ M A ++ + + + +M + + D FS LA
Sbjct: 279 EVLTLMEENGVRPDVVTFSTIMNAWSSAGRMDKCKEIFNDMVK-AEIEPDIHAFSILAKG 337
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
YV AG EKAE L + H ++ +I+ + G + +++ +
Sbjct: 338 YVRAGEPEKAESILTSMRKYGVHPNVVICTTVISGWCSAGKMEHAMKVYEKM 389
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/297 (19%), Positives = 122/297 (41%), Gaps = 7/297 (2%)
Query: 164 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
LM + G P + +I + P TY + AL R+I +++ +G
Sbjct: 19 LMNVLIGKGKPREAHSIFNSLMDEGHKPTLITYTTLVAALTRQKLFKSILRLISKVEENG 78
Query: 224 RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 283
+ D F+++ + + E+G ++A + ++++ S + LI YG G E
Sbjct: 79 -MKPDSILFNSIINAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKTEEA 137
Query: 284 YRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGA 343
++ L+ +Y +++ N +++ A + + D N + A
Sbjct: 138 LKLLEFLQDGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPDAVTYNTLARA 197
Query: 344 YAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDG 403
YA++G AEE+ R PN +T I + Y + G+M A + + + G
Sbjct: 198 YAEKGETIRAEEMILEMLNRRVTPNERTCSIIVNGYCKEGNMVDASRFVFRMKELGV--- 254
Query: 404 GKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 460
+P+ + ++ F D +G + L ++++ V F ++ +++AGR
Sbjct: 255 ---LPNLFVFNSLIKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFSTIMNAWSSAGR 308
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/252 (19%), Positives = 104/252 (41%), Gaps = 1/252 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N TY L+ +C + E+A ++ KM + ++ +N+L YA+ G + +I
Sbjct: 152 NQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPDAVTYNTLARAYAEKGETIRAEEMI 211
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EM + P+ T ++ + ++ A R + MK G V + F++L +++
Sbjct: 212 LEMLNRRVTPNERTCSIIVNGYCKEGNMVDASRFVFRMKELG-VLPNLFVFNSLIKGFLD 270
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
E + L +E D+ + ++ + G + + I+ + A +
Sbjct: 271 TMDTEGVDEVLTLMEENGVRPDVVTFSTIMNAWSSAGRMDKCKEIFNDMVKAEIEPDIHA 330
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
+ + + V + AE ++ + +I + G++E+A ++ E+
Sbjct: 331 FSILAKGYVRAGEPEKAESILTSMRKYGVHPNVVICTTVISGWCSAGKMEHAMKVYEKMC 390
Query: 362 RRGADPNAKTWE 373
G PN KT+E
Sbjct: 391 EIGVSPNLKTYE 402
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 66/159 (41%), Gaps = 1/159 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+T+ +++N + +K + + M + + F+ L Y + G PEK +I+
Sbjct: 294 VTFSTIMNAWSSAGRMDKCKEIFNDMVKAEIEPDIHAFSILAKGYVRAGEPEKAESILTS 353
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ + P+ + + + A +V E+M G V+ + T+ L Y EA
Sbjct: 354 MRKYGVHPNVVICTTVISGWCSAGKMEHAMKVYEKMCEIG-VSPNLKTYETLIWGYGEAK 412
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 282
KAE L+ +E + Q + + G LSE
Sbjct: 413 QPLKAEELLQVMEEKGVFPKKGTMQLIADAWRAIGLLSE 451
>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
Length = 702
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 92/414 (22%), Positives = 159/414 (38%), Gaps = 53/414 (12%)
Query: 74 ALKLSENMEKR-----GMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTY 126
AL+L ++MEKR G V + +D + K Q +D A YF + + N +TY
Sbjct: 199 ALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTY 258
Query: 127 GSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKA 186
SL++ CK + LL MKE G + + FN+++ K EK + +
Sbjct: 259 SSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLK 318
Query: 187 SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE 246
S P+ TYNV + L + A R++ EM + +V D T+S++ + +AG +
Sbjct: 319 SGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMV-ESKVTPDVITYSSIIDGFCKAGRMD 377
Query: 247 KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI 306
KA+ + + L+ + + E +R+ + N I L
Sbjct: 378 KADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMV----NAGFIPGLQTY 433
Query: 307 QVLVNLKDLPGAEKC-----------FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEE 355
VL++ + GA+ K+ + C TY +I + R++ A+E
Sbjct: 434 NVLMDC--VCGADSVESALEIYHKMKRKKRQPDCNTY-----APLIQCLCRARRVDEAKE 486
Query: 356 LKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRT 415
+ PN + + G++ A L+ ++ G P ET +
Sbjct: 487 FLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVG------CQPLGETFKI 540
Query: 416 FMRHFEQEKDVDGAE------GFL-----------EILKKAVDDLGVEVFEPLI 452
+ K + A GF+ EI K D VEV E ++
Sbjct: 541 LVEELYLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMV 594
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 119/291 (40%), Gaps = 24/291 (8%)
Query: 99 LVAKVQGIDAAENYFV---DLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLG 155
++ +V+ D A +F + P N T LLN + K E+A LL++ E
Sbjct: 49 VLQQVEDPDVAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCF 108
Query: 156 FSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERV 215
+ + + +++ + K G ++ ++ EMK + D ++ ++ L I A
Sbjct: 109 PNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEA--- 165
Query: 216 IEEMKRDG-RVAADWTTFSNLASIYVEAGLFEKAERALKELENR-----NAHRDLSAYQF 269
+E+ K G + + T++ + + +A ++A ++E R D+ +Y
Sbjct: 166 LEQFKSMGEECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYST 225
Query: 270 LITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF------K 323
+I + + + Y ++ +R ++Y ++I L + D P +C K
Sbjct: 226 VIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKV-DRPS--ECLELLLHMK 282
Query: 324 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 374
E G D N M+ A K E A + ER + G PN T+ +
Sbjct: 283 EKGFGINIIDF---NAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNV 330
>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 136/308 (44%), Gaps = 10/308 (3%)
Query: 71 YYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKN------HL 124
Y A+ + + ME+ G T+ + L++ K + N L E KN
Sbjct: 49 YREAVMVFKKMEEEGCKPTLITYNVILNVYGK---MGMPWNKIKGLFEGMKNAGVLPDEY 105
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY +L+ C + + E+A A+ + MK + + +N+L+ +Y K+ ++ +++EM
Sbjct: 106 TYNTLITCCRRGSLHEEAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREM 165
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ + P TYN + A A + A + +M +G + D T++ L S +V AG
Sbjct: 166 EVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMV-EGGINLDVFTYTTLLSGFVRAGK 224
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
E A R E+ ++ + LI ++G G +E+ +++ ++ + +++
Sbjct: 225 DESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNT 284
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
++ V FKE + + N +I AY++ G + A ++ +R G
Sbjct: 285 LLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAG 344
Query: 365 ADPNAKTW 372
P+ T+
Sbjct: 345 ITPDLSTY 352
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 110/249 (44%), Gaps = 1/249 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +LL+ Y K T++A +L +M+ S + +NSL++ YA+ G ++ + +
Sbjct: 140 VTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQ 199
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M I D +TY + A RV EM+ G + TF+ L ++ G
Sbjct: 200 MVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAG-CKPNICTFNALIKMHGNRG 258
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
F + + +E++N D+ + L+ ++GQ G SEV +++ ++ A +Y
Sbjct: 259 KFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYN 318
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I A +K T D+ N ++ A A+ G E +E++ +
Sbjct: 319 TLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEMKDG 378
Query: 364 GADPNAKTW 372
PN T+
Sbjct: 379 RCKPNELTY 387
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 138/334 (41%), Gaps = 15/334 (4%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEM 184
Y SL+ +A + +KM+E + + +N ++ +Y K G P KI + + M
Sbjct: 36 YTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPWNKIKGLFEGM 95
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
K + ++PD YTYN + + A V ++MK G V D T++ L +Y ++
Sbjct: 96 KNAGVLPDEYTYNTLITCCRRGSLHEEAAAVFKDMKSMGFV-PDKVTYNALLDVYGKSRR 154
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
++A L+E+E + Y LI+ Y + G L E + + N +Y
Sbjct: 155 TKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGGINLDVFTYTT 214
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
++ V A + F E + +I N +I + G+ ++ E +
Sbjct: 215 LLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSC 274
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 424
P+ TW + +NG M V + K + +VP +T T + + +
Sbjct: 275 CVPDIVTWNTLLAVFGQNG-MDSEVSGVFKEMKR-----AGFVPERDTYNTLISAYSRCG 328
Query: 425 DVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAA 458
D A ++I K+ + + G+ P + TY A
Sbjct: 329 SFDQA---MDIYKRML-EAGI---TPDLSTYNAV 355
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 117/275 (42%), Gaps = 1/275 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY +L++ Y + ++A + ++M E + +N+++ A+ G E+ I EM
Sbjct: 316 TYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEM 375
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
K P+ TY + A A +I + EE+ G + L + + L
Sbjct: 376 KDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEIC-SGVIEPHAVLLKTLVLVNSKCDL 434
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+AE A EL+ + DLS ++++YG+ ++ I + + + +Y +
Sbjct: 435 LVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNS 494
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
++ + ++ +E+ KE + D N +I AY + GR++ A + R G
Sbjct: 495 LMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEMRESG 554
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
P+ T+ F Y + + A+D + I G
Sbjct: 555 LVPDVITYNTFVASYAADSMFEDAIDVVRYMIKHG 589
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 109/262 (41%), Gaps = 9/262 (3%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY ++L + + E++E + +MK+ + + + SL+ YA ++ A+ +E+
Sbjct: 351 TYNAVLAALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEI 410
Query: 185 KASSIMPDSYTYNVWMRALAAVND----ISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
+ I P + V ++ L VN + AE E+KR G + D +T + + SIY
Sbjct: 411 CSGVIEPHA----VLLKTLVLVNSKCDLLVEAEVAFLELKRKG-FSPDLSTLNAMLSIYG 465
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
+F K L + L+ Y L+ ++ ++ N + + + I
Sbjct: 466 RRQMFTKTNEILNFMNESGFTPSLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTI 525
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
SY +I + A + F E D+ N + +YA + E+A ++
Sbjct: 526 SYNTVIFAYCRNGRMKEASRIFSEMRESGLVPDVITYNTFVASYAADSMFEDAIDVVRYM 585
Query: 361 RRRGADPNAKTWEIFSDYYLRN 382
+ G PN T+ D Y ++
Sbjct: 586 IKHGCKPNQNTYNSVVDGYCKH 607
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 1/174 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
T ++L+ Y + M K +L M E S +NSLM +++++ + E+ +++E+
Sbjct: 456 TLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLMYMHSRSENFERSEEVLKEI 515
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
A I PD+ +YN + A + A R+ EM+ G V D T++ + Y +
Sbjct: 516 LAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEMRESGLV-PDVITYNTFVASYAADSM 574
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
FE A ++ + + + Y ++ Y + + + SL P+ +
Sbjct: 575 FEDAIDVVRYMIKHGCKPNQNTYNSVVDGYCKHNHRDDAIMFISSLHELDPHIS 628
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 81/209 (38%), Gaps = 14/209 (6%)
Query: 198 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 257
V + L +S A ++ ++ +DG D +++L + V G + +A K++E
Sbjct: 3 VIISMLGKEGKVSVAASLLNDLHKDG-FGLDVYAYTSLITACVSNGRYREAVMVFKKMEE 61
Query: 258 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN-------ISYLNMIQVLV 310
L Y ++ +YG+ G W ++ F N +Y +I
Sbjct: 62 EGCKPTLITYNVILNVYGKMG------MPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCR 115
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
A FK+ +S D N ++ Y K R + A E+ G P+
Sbjct: 116 RGSLHEEAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIV 175
Query: 371 TWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
T+ Y R+G +K A++ + ++ G
Sbjct: 176 TYNSLISAYARDGLLKEAMELKNQMVEGG 204
>gi|255661156|gb|ACU25747.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 426
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 121/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 6 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 65
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S PD YN + A +I EM+ G V + ++S L ++Y
Sbjct: 66 IFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAG-VTPNTASYSTLLTMY 124
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ +R
Sbjct: 125 VENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNXMMMIYGKTLEHEKANNLIQE 244
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 245 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 284
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 108/221 (48%), Gaps = 20/221 (9%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY ++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 217 QNVVTYNXMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML 276
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S + D Y + A ++ A+R++ E+KR + D I
Sbjct: 277 FQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAI-----HILA 331
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + +D++ ++ +I L Y + GN+ EV+ R L FP++
Sbjct: 332 GAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGY-FPDS 390
Query: 298 ANISYLNMIQVLVN----LKDLPGAEKCFKEW-ESGCATYD 333
N+I +++N L + A + E E GC D
Sbjct: 391 ------NVIALVLNAYGKLHEFDKANDVYMEMQEVGCVFSD 425
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 8/202 (3%)
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
++ PD YTY+ + A +++M++D RV D +SNL + + + K
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNM 305
A L+ DL AY +I ++G+ E + +R A PNTA SY +
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTA--SYSTL 120
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
+ + V K A F E D+ N+MI Y + G + A++L R+ G
Sbjct: 121 LTMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180
Query: 366 DPNAKTWEIFSDYYLRNGDMKL 387
+PN ++ Y GD +L
Sbjct: 181 EPNVVSYNTLLRVY---GDAEL 199
>gi|410110099|gb|AFV61129.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
trifolia]
Length = 440
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 121/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 12 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKXCDYSKAIS 71
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S PD YN + A +I EMK G V + ++S L ++Y
Sbjct: 72 IFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKXAG-VMPNTASYSTLLTMY 130
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ +R
Sbjct: 131 VENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 190
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 191 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 250
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 251 MQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 290
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 91/211 (43%), Gaps = 8/211 (3%)
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+ EM+ ++ PD YTY+ + A +++M++D RV D +SNL +
Sbjct: 1 GLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIEL 59
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPN 296
+ + KA L+ DL AY +I ++G+ E + ++ A PN
Sbjct: 60 SRKXCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKXAGVMPN 119
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
TA SY ++ + V K A F E D+ N+MI Y + G + A++L
Sbjct: 120 TA--SYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 177
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDMKL 387
R+ G +PN ++ Y GD +L
Sbjct: 178 FWGMRKMGIEPNVVSYNTLLRVY---GDAEL 205
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 107/217 (49%), Gaps = 12/217 (5%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 223 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAML 282
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S D + + A ++ A+R++ E+KR + D T LA
Sbjct: 283 FQKLRSSGXEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD-TAIHILAG--- 338
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + +D++ ++ +I L Y + N+ EV+ R L FP++
Sbjct: 339 -AGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGY-FPDS 396
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYD 333
I+ ++ L++ A + E E GC D
Sbjct: 397 DVIA--XVLNAYGKLQEFDKANDVYMEMQEVGCVFSD 431
>gi|224120112|ref|XP_002331139.1| predicted protein [Populus trichocarpa]
gi|222872867|gb|EEF09998.1| predicted protein [Populus trichocarpa]
Length = 329
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 130/301 (43%), Gaps = 7/301 (2%)
Query: 76 KLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCY 133
++ E M ++G+ + + ++ K+ A F +L E N TYG+L++
Sbjct: 22 RMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDELTEKGLVANVHTYGALIDGV 81
Query: 134 CKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDS 193
CK E AE L+ +M+ L + + +N+L+ Y K G ++ + M+ D
Sbjct: 82 CKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGLIDEAFKVQVIMEKKGFENDI 141
Query: 194 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 253
YT N L +N A+R + M G V + +++ L IY + G F +A++ +
Sbjct: 142 YTLNTIADGLRKLNQPEEAKRWLLTMIEKG-VVPNVVSYTTLIDIYCKEGNFVEAKKLFQ 200
Query: 254 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTANISYLNMIQVLVN 311
E++ + Y LI + + G + E Y + +R FP+ +Y +++
Sbjct: 201 EMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAKGIFPDI--YTYTSLLHGECI 258
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
L A + F E ++ +I +KEGR E A +L + G P+ +
Sbjct: 259 FGKLDDAVELFNEVRQKGLPLNVVTYTAIISGLSKEGRSEEAFKLYDEMTEAGLTPDDRV 318
Query: 372 W 372
+
Sbjct: 319 Y 319
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/250 (19%), Positives = 111/250 (44%), Gaps = 5/250 (2%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY L++ + ++ E + E+M E + + ++ K G+ ++ A+ E+
Sbjct: 3 TYTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDEL 62
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
++ + +TY + + ++ AE ++ EM+ G + + ++ L Y + GL
Sbjct: 63 TEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRG-LDVNQLIYNTLIDGYCKRGL 121
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISY 302
++A + +E + D+ + + E R ++ + PN +SY
Sbjct: 122 IDEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNV--VSY 179
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+I + + A+K F+E + + NV+I ++K+GR++ A EL++ R
Sbjct: 180 TTLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRA 239
Query: 363 RGADPNAKTW 372
+G P+ T+
Sbjct: 240 KGIFPDIYTY 249
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 104/234 (44%), Gaps = 13/234 (5%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
+ L+ + +G +++ + +EM I D + Y V + + + A + +E+
Sbjct: 4 YTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDELT 63
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
G VA + T+ L +AG E AE + E++ R + Y LI Y + G +
Sbjct: 64 EKGLVA-NVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGLI 122
Query: 281 SEVYRIWRSL-RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-----ESGCATYDI 334
E +++ + + F N +I LN I L+ L E+ K W E G +
Sbjct: 123 DEAFKVQVIMEKKGFEN--DIYTLNTIAD--GLRKLNQPEEA-KRWLLTMIEKGVVPNVV 177
Query: 335 RVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 388
T +I Y KEG A++L + ++ G +PNA T+ + D + + G MK A
Sbjct: 178 SYTT-LIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEA 230
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 116/258 (44%), Gaps = 10/258 (3%)
Query: 20 HLEEALYDRLFKKG---SSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALK 76
H AL D + K G ++++ V + + L + ++ + K R L A K
Sbjct: 72 HTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCK----RGLIDEAFK 127
Query: 77 LSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYC 134
+ MEK+G + D + K+ + A+ + + + E N ++Y +L++ YC
Sbjct: 128 VQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYTTLIDIYC 187
Query: 135 KELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSY 194
KE +A+ L ++MK+ +++ +N L+ ++K G ++ + EM+A I PD Y
Sbjct: 188 KEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAKGIFPDIY 247
Query: 195 TYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE 254
TY + + A + E+++ G + + T++ + S + G E+A + E
Sbjct: 248 TYTSLLHGECIFGKLDDAVELFNEVRQKG-LPLNVVTYTAIISGLSKEGRSEEAFKLYDE 306
Query: 255 LENRNAHRDLSAYQFLIT 272
+ D Y L++
Sbjct: 307 MTEAGLTPDDRVYTSLVS 324
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/410 (20%), Positives = 169/410 (41%), Gaps = 26/410 (6%)
Query: 25 LYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKR 84
+D+L +G QLNQ ++GDT A+KL + ++ R
Sbjct: 151 FHDKLLAQGF-------QLNQVSYGTLINGVCKIGDT----------RAAIKLLQKIDGR 193
Query: 85 GMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP--ETSKNHLTYGSLLNCYCKELMTEKA 142
V + +D + K Q + A F ++ S + +TY +L+ +C E ++A
Sbjct: 194 LTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEA 253
Query: 143 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 202
LL +M + + +N L+ K G ++ +++ M + + PD TY+ M
Sbjct: 254 IGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDG 313
Query: 203 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 262
V ++ A+ V M G V D T++ L + + + + ++A KE+ +N
Sbjct: 314 YFLVYEVKKAQHVFNAMSLMG-VTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVP 372
Query: 263 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 322
+ Y LI ++G + V+ + + I+Y ++I L L A F
Sbjct: 373 GIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALF 432
Query: 323 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 382
+ + + +++ K GRL++A+E+ + +G N T+ + D + +
Sbjct: 433 NKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQ 492
Query: 383 GDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGF 432
G ++ A+ L K D G +P + T + ++ + G GF
Sbjct: 493 GLLEEALTMLSKMEDNG------CIPDAVTFEIIIIALFKKDENGGNVGF 536
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/414 (17%), Positives = 166/414 (40%), Gaps = 23/414 (5%)
Query: 1 MAMPQR--FGRTKNIAKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQF-----LKSKKRV 53
M++P R F + +I S L+ + + + S +V ++QF ++ +
Sbjct: 1 MSLPTRLRFSVSLSIPNFSS-FLQNSSHSHFHSQPPSIQNVDDAVSQFNRMLCMRHTPPI 59
Query: 54 FKW-EVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENY 112
++ ++ D+ K+ K Y A+ LS +E +G+ + I ++ + I +
Sbjct: 60 IQFNKILDSFAKM---KHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116
Query: 113 FVDL------PETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMT 166
+ P+T +T +L+ C + +KA +K+ + + + +L+
Sbjct: 117 LAKILKRGYPPDT----VTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLIN 172
Query: 167 LYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA 226
K G ++Q++ P+ Y+ + AL +S A + EM G ++
Sbjct: 173 GVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKG-IS 231
Query: 227 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
AD T+S L + G ++A L E+ + + ++ Y L+ + G + E +
Sbjct: 232 ADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSV 291
Query: 287 WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAK 346
+ A I+Y ++ + ++ A+ F T D+ ++I + K
Sbjct: 292 LAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCK 351
Query: 347 EGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 400
++ A L + ++ P T+ D ++G + D +++ D G+
Sbjct: 352 NKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQ 405
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 105/228 (46%), Gaps = 7/228 (3%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELM 138
M G+ V I ++ K + +D A N F ++ + + +TY SL++ CK
Sbjct: 330 MSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR 389
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
L+++M + + + ++SL+ K GH ++ A+ +MK I P+++T+ +
Sbjct: 390 IPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTI 449
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
+ L + A+ V +++ G + T++ + + + GL E+A L ++E+
Sbjct: 450 LLDGLCKGGRLKDAQEVFQDLLTKGY-HLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDN 508
Query: 259 NAHRDLSAYQ-FLITLYGQ---TGNLSEVYRIWRSLRLAFPNTANISY 302
D ++ +I L+ + GN+ ++W + T +I++
Sbjct: 509 GCIPDAVTFEIIIIALFKKDENGGNVGFDKKVWEIVEHKKGETPSITF 556
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 85/213 (39%), Gaps = 5/213 (2%)
Query: 173 HPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTF 232
H ++ ++ I PD +T N+ + + I+ ++ ++ + G D TF
Sbjct: 941 HYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGY-HPDTITF 999
Query: 233 SNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL-- 290
+ L + G KA +L + + +Y LI + G+ ++ R +
Sbjct: 1000 TTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDG 1059
Query: 291 RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRL 350
RL P+ + Y +I L + + A F E + D+ N +I + G+L
Sbjct: 1060 RLTKPDV--VMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKL 1117
Query: 351 ENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
+ A L + + +PN +T+ I D + G
Sbjct: 1118 KEAIGLLNKMVLKTINPNVRTYNILVDALCKEG 1150
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 41/209 (19%), Positives = 86/209 (41%), Gaps = 11/209 (5%)
Query: 69 KLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL------PETSKN 122
K Y A+ LS +E +G+ + I ++ + I + + P+T
Sbjct: 940 KHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDT--- 996
Query: 123 HLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQ 182
+T+ +L+N C + KA +K+ + + + +L+ K G +++
Sbjct: 997 -ITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLR 1055
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
++ PD YN + AL +S A + EM G ++AD T++ L +
Sbjct: 1056 KIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKG-ISADVVTYNTLIYGFCIV 1114
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLI 271
G ++A L ++ + + ++ Y L+
Sbjct: 1115 GKLKEAIGLLNKMVLKTINPNVRTYNILV 1143
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 67/142 (47%), Gaps = 3/142 (2%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
T + + Y ++++ CK + KA L +M + + +N+L+ + G ++
Sbjct: 1062 TKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAI 1121
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALA--AVNDISGAERVIEEMKRDGRVAADWTTFSNLA 236
++ +M +I P+ TYN+ + AL + + + ++ +M+ +G A+ TF +
Sbjct: 1122 GLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNG-CKANAVTFEIII 1180
Query: 237 SIYVEAGLFEKAERALKELENR 258
S E +K E+ L E+ R
Sbjct: 1181 SALFEKDENDKVEKLLHEMIAR 1202
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 104/469 (22%), Positives = 183/469 (39%), Gaps = 35/469 (7%)
Query: 2 AMPQRFGRTKNIAKRSKKH---LEEALYDRLFKKGSSDVSVR-QQLNQFLKSKKRVFKWE 57
A P F T I + H L A++DR+ K G SV L L S+ R+ +
Sbjct: 233 AYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEE-- 290
Query: 58 VGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP 117
A+ + E M ++G+ TV I L + A +
Sbjct: 291 ----------------AMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMK 334
Query: 118 E--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
+ N T+ +L++ ++ E A L KM L +++ +N+L+ G E
Sbjct: 335 KRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFE 394
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
I + M + +P + TYN ++ + DI A + ++M + G + + T++ L
Sbjct: 395 TAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGS-SPNVITYNTL 453
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
Y + G A R L+ ++ D Y LI+ + + G L ++ +
Sbjct: 454 IYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGI 513
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCF-KEWESGCATYDIRVTNVMIGAYAKEGRLENAE 354
+ +++Y +I NL + A F K ESG + NVMI ++K + AE
Sbjct: 514 SPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSS-QTYNVMISGFSKTNSISEAE 572
Query: 355 ELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIR 414
+ ++G PN T+ F D RNG LA + + + P+ T
Sbjct: 573 NFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEM------EKRNYFPNLYTYS 626
Query: 415 TFMRHFEQEKDVDGAEGF--LEILKKAVDDLGVEVFEPLIRTYAAAGRT 461
+ + QE + AE + L L + V+ + L++ GR
Sbjct: 627 SLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRC 675
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/362 (20%), Positives = 140/362 (38%), Gaps = 42/362 (11%)
Query: 77 LSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYC 134
LSE K T+ L + K +D A + ++ + + + LT+ +++N C
Sbjct: 154 LSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILC 213
Query: 135 KELMTEKAEALLEKM----------------------KELNLGFS-------------SM 159
K+ ++A+ ++ + L+L F+ S+
Sbjct: 214 KKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSV 273
Query: 160 PFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM 219
+++L+ G E+ +++EM I P YTY + + +L S A ++ +M
Sbjct: 274 TYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKM 333
Query: 220 KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGN 279
K+ G V + TF+ L S G FE A ++ Y LI G
Sbjct: 334 KKRGCV-PNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGR 392
Query: 280 LSEVYRI--WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVT 337
+ I W + P+T +Y +I+ + D+ A F + ++ ++
Sbjct: 393 FETAFTIFKWMLSHGSLPSTQ--TYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITY 450
Query: 338 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
N +I Y K+G L NA L E + G P+A T+ + R G ++ A ++
Sbjct: 451 NTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMME 510
Query: 398 TG 399
G
Sbjct: 511 HG 512
>gi|255661134|gb|ACU25736.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
gi|255661138|gb|ACU25738.1| pentatricopeptide repeat-containing protein [Verbena halei]
gi|255661140|gb|ACU25739.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 426
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 121/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 6 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 65
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S PD YN + A +I EM+ G V + ++S L ++Y
Sbjct: 66 IFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAG-VTPNTASYSTLLTMY 124
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ +R
Sbjct: 125 VENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 245 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 284
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 109/221 (49%), Gaps = 20/221 (9%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML 276
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S + D Y + A ++ A+R++ E+KR + D I
Sbjct: 277 FQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAI-----HILA 331
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + +D++ ++ +I L Y + GN+ EV+ R L FP++
Sbjct: 332 GAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGY-FPDS 390
Query: 298 ANISYLNMIQVLVN----LKDLPGAEKCFKEW-ESGCATYD 333
N+I +++N L + A + E E GC D
Sbjct: 391 ------NVIALILNAYGKLHEFDKANDVYMEMQEVGCVFSD 425
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 8/202 (3%)
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
++ PD YTY+ + A +++M++D RV D +SNL + + + K
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNM 305
A L+ DL AY +I ++G+ E + +R A PNTA SY +
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTA--SYSTL 120
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
+ + V K A F E D+ N+MI Y + G + A++L R+ G
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180
Query: 366 DPNAKTWEIFSDYYLRNGDMKL 387
+PN ++ Y GD +L
Sbjct: 181 EPNVVSYNTLLRVY---GDAEL 199
>gi|255661170|gb|ACU25754.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 426
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 121/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 6 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 65
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S PD YN + A +I EM+ G V + ++S L ++Y
Sbjct: 66 IFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAG-VTPNTASYSTLLTMY 124
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ +R
Sbjct: 125 VENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 245 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 284
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 108/221 (48%), Gaps = 20/221 (9%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML 276
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S + D Y + A ++ A+R++ E+KR + D I
Sbjct: 277 FQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAI-----HILA 331
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + +D++ ++ +I L Y + GN+ V+ R L FP++
Sbjct: 332 GAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVVVFDKMRGLGY-FPDS 390
Query: 298 ANISYLNMIQVLVN----LKDLPGAEKCFKEW-ESGCATYD 333
N+I +++N L + A + E E GC D
Sbjct: 391 ------NVIALVLNAYGKLHEFDKANDVYMEMQEVGCVFSD 425
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 8/202 (3%)
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
++ PD YTY+ + A +++M++D RV D +SNL + + + K
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNM 305
A L+ DL AY +I ++G+ E + +R A PNTA SY +
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTA--SYSTL 120
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
+ + V K A F E D+ N+MI Y + G + A++L R+ G
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180
Query: 366 DPNAKTWEIFSDYYLRNGDMKL 387
+PN ++ Y GD +L
Sbjct: 181 EPNVVSYNTLLRVY---GDAEL 199
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 121/276 (43%), Gaps = 1/276 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +LLN CKE AE LL +M+E + F +L+ Y G +K +
Sbjct: 52 VTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDT 111
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + PD TYN + + D+ A + ++M + + T+S L + E G
Sbjct: 112 MLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSR-EIFPNHVTYSILIDSHCEKG 170
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
E A L E+ N+ ++ Y +I Y ++GN+S+ + + + + + I+Y
Sbjct: 171 QVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYN 230
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I + + A K E D+ N++I ++ G ++ A + E+ +
Sbjct: 231 TLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAK 290
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
G +P+ T+ + ++ G+ K A ++ + G
Sbjct: 291 GIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 326
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 103/215 (47%), Gaps = 3/215 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP--ETSKNHLTYGSLLN 131
AL+L + M + + + +D + + +D A + + D+ E NH+TY L++
Sbjct: 105 ALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILID 164
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C++ E A L++M + + M +NS++ Y ++G+ K +Q+M + + P
Sbjct: 165 SHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSP 224
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D TYN + + + A +++ M+++ +V D T++ L + + G ++A
Sbjct: 225 DLITYNTLIHGYIKEDKMHDAFKLLNMMEKE-KVQPDVVTYNMLINGFSVHGNVQEAGWI 283
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
+++ + D Y +I + GN E +++
Sbjct: 284 FEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQL 318
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/320 (20%), Positives = 122/320 (38%), Gaps = 46/320 (14%)
Query: 144 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 203
A L +M+ L + + ++ + + G + EM +PD TYN + L
Sbjct: 2 AYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGL 61
Query: 204 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 263
+ AE ++ EM+ G V D TF+ L Y G +KA + + N+ D
Sbjct: 62 CKERRLLDAEGLLNEMRERG-VPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPD 120
Query: 264 LSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKC 321
+ Y LI + G+L + +W + R FPN +++Y
Sbjct: 121 IVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPN--HVTY------------------- 159
Query: 322 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 381
+++I ++ ++G++E+A + +G PN T+ Y R
Sbjct: 160 ----------------SILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCR 203
Query: 382 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVD 441
+G++ L+K + K P T T + + +E + A L +++K
Sbjct: 204 SGNVSKGQKFLQKMMVN------KVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKV 257
Query: 442 DLGVEVFEPLIRTYAAAGRT 461
V + LI ++ G
Sbjct: 258 QPDVVTYNMLINGFSVHGNV 277
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 53/111 (47%)
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
+ S + +TY +L++ Y KE A LL M++ + + +N L+ ++ G+ ++
Sbjct: 221 KVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEA 280
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAAD 228
I ++M A I PD YTY + + A ++ +EM + G D
Sbjct: 281 GWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDD 331
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 159/364 (43%), Gaps = 17/364 (4%)
Query: 131 NCYCKELMTEKAEALLEKMKELNLGF--SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS 188
N +CKE E+A +E+M L GF FN L+ +KTGH + ++ M
Sbjct: 273 NGFCKEGRIEEALRFIEEMS-LREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREG 331
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYVEAGLFEK 247
PD YTYN + L + ++ A +V+ +M +RD + + T++ + S + E+
Sbjct: 332 FDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERD--CSPNTVTYNTIISTLCKENQVEE 389
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 307
A + L + D+ Y LI + N + +++ ++ + +Y +I
Sbjct: 390 ATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLID 449
Query: 308 VLVNLKDLPGAEKCFKEWE-SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD 366
L L A KE E SGCA ++ N +I + K R+ AEE+ ++ +G
Sbjct: 450 SLCFRGKLQEALNLLKEMEVSGCAR-NVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVS 508
Query: 367 PNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDV 426
N+ T+ D ++ ++ A +++ I G P T + + +F + D+
Sbjct: 509 RNSVTYNTLIDGLCKSERVEEASQLMDQMIMEG------LRPDKFTYNSLLTYFCKAGDI 562
Query: 427 DGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPV--MLRRLKMEKVEVS-EASKKL 483
A ++ + + + + LI AGR +LR ++M+ + ++ A +
Sbjct: 563 KKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPV 622
Query: 484 LEAI 487
++A+
Sbjct: 623 IQAL 626
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 158/397 (39%), Gaps = 50/397 (12%)
Query: 133 YCKELMTEKAEALLEKMKELNLGF--SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
+CKE E+A +E+M L GF FN L+ +KTGH + ++ M
Sbjct: 275 FCKEGRIEEALRFIEEMS-LREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFD 333
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
PD YTYN + L + ++ A +V+ +M +RD + + T++ + S + E+A
Sbjct: 334 PDIYTYNSLISGLCKLGEVDEAVKVLNQMIERD--CSPNTVTYNTIISTLCKENQVEEAT 391
Query: 250 R-AL----------------------------------KELENRNAHRDLSAYQFLITLY 274
+ AL KE++ + H D Y LI
Sbjct: 392 KLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSL 451
Query: 275 GQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDI 334
G L E + + + ++ I+Y +I K + AE+ F + E + +
Sbjct: 452 CFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNS 511
Query: 335 RVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
N +I K R+E A +L ++ G P+ T+ Y+ + GD+K A D
Sbjct: 512 VTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAAD---- 567
Query: 395 AIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRT 454
+ T DG + P T T + + V+ A L ++ +L + P+I+
Sbjct: 568 IVQTMASDGCE--PDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQA 625
Query: 455 YAAAGRT-SPVMLRRLKMEKVEVSEAS--KKLLEAIC 488
R+ V L R +EK E +A K + +C
Sbjct: 626 LFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLC 662
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 2/152 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
AL L + ME G + V +D K + I AE F ++L S+N +TY +L++
Sbjct: 460 ALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLID 519
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK E+A L+++M L +NSL+T + K G +K I+Q M + P
Sbjct: 520 GLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEP 579
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
D TY + L + A +++ ++ G
Sbjct: 580 DIVTYGTLIAGLCKAGRVEAATKLLRTIQMKG 611
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 125/300 (41%), Gaps = 5/300 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL++ + M + G + + + + K+ +D A + E S N +TY ++++
Sbjct: 320 ALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIIS 379
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CKE E+A L + + +NSL+ + + + +EMK P
Sbjct: 380 TLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHP 439
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D +TYN+ + +L + A +++EM+ G A + T++ L + + +AE
Sbjct: 440 DEFTYNMLIDSLCFRGKLQEALNLLKEMEVSG-CARNVITYNTLIDGFCKNKRIAEAEEI 498
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
++E + R+ Y LI ++ + E ++ + + +Y +++
Sbjct: 499 FDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCK 558
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD--PNA 369
D+ A + S DI +I K GR+E A +L + +G + P+A
Sbjct: 559 AGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHA 618
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 130/305 (42%), Gaps = 16/305 (5%)
Query: 103 VQGIDAAENYFVDLP-----ETSKNH---LTYGSLLNCYCKELMTEKAEALLEKMKELNL 154
+QG+ + N+ V + +T H TY L++ C ++A LL++M+
Sbjct: 413 IQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGC 472
Query: 155 GFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAER 214
+ + +N+L+ + K + I +M+ + +S TYN + L + A +
Sbjct: 473 ARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQ 532
Query: 215 VIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLY 274
++++M +G + D T+++L + + +AG +KA ++ + + D+ Y LI
Sbjct: 533 LMDQMIMEG-LRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGL 591
Query: 275 GQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYD 333
+ G + ++ R++++ N +Y +IQ L K A + F+E E A
Sbjct: 592 CKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDA 651
Query: 334 IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA-VDCL 392
+ V G G + A + RG P E S Y L G LA V L
Sbjct: 652 VTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVP-----EFSSFYMLAEGLFSLAMVGTL 706
Query: 393 EKAID 397
K ID
Sbjct: 707 IKLID 711
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 116/252 (46%), Gaps = 3/252 (1%)
Query: 150 KELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDI 209
K+ N SS F ++ K G + + I++EMK S + D+ + V++ + A+
Sbjct: 81 KQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEMKISLSVIDNDSLLVFIESYASFGLY 140
Query: 210 SGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQF 269
+ + ++ M+ + V A+ ++ L ++ V+ + E A + +R D+S +
Sbjct: 141 NEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNI 200
Query: 270 LITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESG 328
LI + + + + ++ ++Q + +L GA + ++ E+G
Sbjct: 201 LIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAG 260
Query: 329 CATYDIRVTNVMIGAYAKEGRLENAEE-LKERARRRGADPNAKTWEIFSDYYLRNGDMKL 387
C ++ V ++ G + KEGR+E A ++E + R G P+ T+ + + + G +K
Sbjct: 261 CVVTNVTVNVLVNG-FCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKH 319
Query: 388 AVDCLEKAIDTG 399
A++ ++ + G
Sbjct: 320 ALEVMDMMLREG 331
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 107/272 (39%), Gaps = 4/272 (1%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
T+ L+ C+ A L+E+M++ L F ++M + + G+ + + ++M
Sbjct: 197 TFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQM 256
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ + + T NV + I A R IEEM D TF+ L + + G
Sbjct: 257 VEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGH 316
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISY 302
+ A + + D+ Y LI+ + G + E ++ + R PNT ++Y
Sbjct: 317 VKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNT--VTY 374
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+I L + A K D+ N +I A EL + +
Sbjct: 375 NTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKT 434
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
+G P+ T+ + D G ++ A++ L++
Sbjct: 435 KGCHPDEFTYNMLIDSLCFRGKLQEALNLLKE 466
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 147/347 (42%), Gaps = 42/347 (12%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY +++N YC E A + + MK+ NL +NS ++ K E+ ++
Sbjct: 251 NVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVL 310
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
++ S ++P++ TYN + D+ A +EM G VA+ +T + ++++E
Sbjct: 311 CKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLE 370
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
+ E+AE +KE+ + D+ Y I Y + GN + ++ + +
Sbjct: 371 KRI-EEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVET 429
Query: 302 YLNMIQVLVNLKDLPGAEKCFKE----------------WESGCATYDI----------- 334
Y ++I V + AE+ FK+ + C +I
Sbjct: 430 YTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMD 489
Query: 335 -------RVT-NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 386
VT N ++ Y +E ++E A++L + + RG P+ ++ Y + GDMK
Sbjct: 490 NAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMK 549
Query: 387 LAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 433
A++ ++ + G + P+ T ++ + + + D AE L
Sbjct: 550 DALEVFDEMLSLG------FDPTLLTYNALIQGYSKIGEADHAEELL 590
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 111/249 (44%), Gaps = 1/249 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
TY L++ E E+AE ++++M+E + + +N + Y + G+ +K ++ E
Sbjct: 358 FTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDE 417
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M +I P TY + N +S AE ++ ++G + D F+ L + G
Sbjct: 418 MVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLP-DIIMFNALIDGHCVNG 476
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
++A + LKE++N D + L+ Y + + E ++ ++ +ISY
Sbjct: 477 NIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYN 536
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I D+ A + F E S + N +I Y+K G ++AEEL + +
Sbjct: 537 TLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSK 596
Query: 364 GADPNAKTW 372
G P+ T+
Sbjct: 597 GITPDDSTY 605
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 95/215 (44%), Gaps = 11/215 (5%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVD------LPETSKNHLTYG 127
AL L + M ++ + TV +D+ K + AE F LP+ + +
Sbjct: 411 ALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDI----IMFN 466
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 187
+L++ +C ++A LL++M + + FN+LM Y + E+ ++ EMK
Sbjct: 467 ALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKER 526
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
I PD +YN + + D+ A V +EM G T++ L Y + G +
Sbjct: 527 GIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLG-FDPTLLTYNALIQGYSKIGEADH 585
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 282
AE L+E++++ D S Y ++I +L E
Sbjct: 586 AEELLREMQSKGITPDDSTYLYVIEAMKTNDDLVE 620
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 132/328 (40%), Gaps = 44/328 (13%)
Query: 147 EKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV 206
E+M ++N+ S + FN ++ + + G +K I M+ + P+ TYN +
Sbjct: 206 EEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLR 265
Query: 207 NDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSA 266
A ++ + MK D + D T+++ S + E+A L +L +
Sbjct: 266 GKFEAASKIFKTMK-DKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVT 324
Query: 267 YQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI-SYLNMIQVLVNLKDLPGAEKCFKEW 325
Y LI G+L + + +R + A++ +Y +I L K + AE KE
Sbjct: 325 YNALIDGCCNKGDLDKAFA-YRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEM 383
Query: 326 -----ESGCATYDIRVT---------------------NV---------MIGAYAKEGRL 350
E TY+I++ N+ +I + K R+
Sbjct: 384 REKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRM 443
Query: 351 ENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSS 410
AEE +++ + G P+ + D + NG++ A L++ D K VP
Sbjct: 444 SEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEM------DNAKVVPDE 497
Query: 411 ETIRTFMRHFEQEKDVDGAEGFLEILKK 438
T T M+ + +E+ V+ A+ L+ +K+
Sbjct: 498 VTFNTLMQGYCRERKVEEAKKLLDEMKE 525
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 159/378 (42%), Gaps = 20/378 (5%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
K L + LL+ YC+ ++A L MKE + + NSL++L K + +
Sbjct: 145 KTTLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFV 204
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
+EM +I T+N+ + L A+ I M+ G V + T++ + + Y
Sbjct: 205 YEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYG-VKPNVVTYNTVINGYC 263
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTA 298
G FE A + K ++++N D Y I+ + + E + L + PN
Sbjct: 264 LRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNA- 322
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
++Y +I N DL A E + + N++I A E R+E AE++ +
Sbjct: 323 -VTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIK 381
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 418
R +G +P+ T+ I + Y R G+ K A+ ++ ++ P+ ET + +
Sbjct: 382 EMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKN------IRPTVETYTSLID 435
Query: 419 HFEQEKDVDGAEGFLEILKKAVDD---LGVEVFEPLIRTYAAAGRTSPV--MLRRLKMEK 473
F + + AE E KK++ + + +F LI + G +L+ + K
Sbjct: 436 VFGKRNRMSEAE---EKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAK 492
Query: 474 VEVSEAS-KKLLEAICVE 490
V E + L++ C E
Sbjct: 493 VVPDEVTFNTLMQGYCRE 510
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 65/129 (50%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ +T+ +L+ YC+E E+A+ LL++MKE + + +N+L++ Y+K G + +
Sbjct: 496 DEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVF 555
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EM + P TYN ++ + + + AE ++ EM+ G D T + ++
Sbjct: 556 DEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKTN 615
Query: 242 AGLFEKAER 250
L E ++
Sbjct: 616 DDLVENDDK 624
>gi|255661184|gb|ACU25761.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 426
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 121/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 6 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 65
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S PD YN + A +I EMK G V + ++S L ++Y
Sbjct: 66 IFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAG-VMPNTXSYSTLLTMY 124
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ +R
Sbjct: 125 VENKKFLEALSVFSEMREJKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 245 MQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 284
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 111/221 (50%), Gaps = 20/221 (9%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAML 276
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S I D + + A ++ A+R++ E+KR + D T LA
Sbjct: 277 FQKLRSSGIEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD-TAIHILAG--- 332
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + +D++ ++ +I L Y + N+ EV+ R L FP++
Sbjct: 333 -AGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGY-FPDS 390
Query: 298 ANISYLNMIQVLVN----LKDLPGAEKCFKEW-ESGCATYD 333
++I +++N L++ A + E E GC D
Sbjct: 391 ------DVIAIVLNAYGKLQEFDKANDVYMEMQEVGCVFSD 425
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 115/276 (41%), Gaps = 1/276 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+ Y ++N CK+ A L +M + + FNSL+ + G ++ + E
Sbjct: 200 VMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHE 259
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M +I PD YT+++ + AL +I+ A+ ++ M + G V D T+S+L Y
Sbjct: 260 MVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQG-VIPDVVTYSSLMDGYCLVN 318
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
KA+ + +Y +I G+ + E +++ + ++Y
Sbjct: 319 EVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYN 378
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
++I L L + A + E + DI N +I K ++ A L ++ + +
Sbjct: 379 SLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQ 438
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
G P+ T+ I D + G +K A D + + G
Sbjct: 439 GIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKG 474
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 124/302 (41%), Gaps = 38/302 (12%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
A L M + +N V +I +D + K I A+N + + + +TY SL++
Sbjct: 253 AFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMD 312
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
YC KA+ + M L + + +N ++ K ++ ++ +EM I P
Sbjct: 313 GYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAP 372
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D+ TYN + L + IS A ++++EM +G + AD T+++L + + +KA
Sbjct: 373 DTVTYNSLIDGLCKLGRISYAWQLVDEMHNNG-IPADILTYNSLIDVLCKNHHIDKAIAL 431
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
+K+++++ + Y LI + G L +++ L +
Sbjct: 432 VKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLI------------------- 472
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
K + TY N+MI KEG AE L + G P+A T
Sbjct: 473 -----------KGYSVNAWTY-----NIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVT 516
Query: 372 WE 373
+E
Sbjct: 517 YE 518
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 95/197 (48%), Gaps = 11/197 (5%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL------PETSKNHLTYGSLLNCYC 134
M + G+ I ++ + K++ +D A + F ++ P+T +TY SL++ C
Sbjct: 330 MSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDT----VTYNSLIDGLC 385
Query: 135 KELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSY 194
K A L+++M + + +NSL+ + K H +K A+++++K I P Y
Sbjct: 386 KLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMY 445
Query: 195 TYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE 254
TYN+ + L + A+ V +++ G W T++ + + + GLF +AE L +
Sbjct: 446 TYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAW-TYNIMINGLCKEGLFNEAEVLLSK 504
Query: 255 LENRNAHRDLSAYQFLI 271
+EN D Y+ +I
Sbjct: 505 MENNGIIPDAVTYETII 521
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 76/362 (20%), Positives = 156/362 (43%), Gaps = 9/362 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL--PETSKNHLTYGSLLN 131
AL++ + +E + +N V I ++ + K + + A + ++ S + +T+ SL+
Sbjct: 183 ALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLIL 242
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C ++A L +M N+ F+ L+ K G+ + ++ M ++P
Sbjct: 243 GFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIP 302
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D TY+ M VN+++ A+ V M R G VA +++ + + + + ++A
Sbjct: 303 DVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLG-VAPHAHSYNIMINGLGKIKMVDEALSL 361
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
KE+ + D Y LI + G +S +++ + ++Y ++I VL
Sbjct: 362 FKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCK 421
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+ A K+ + + N++I K GRL+NA+++ + +G NA T
Sbjct: 422 NHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWT 481
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG 431
+ I + + G A L K + G +P + T T +R ++ + + AE
Sbjct: 482 YNIMINGLCKEGLFNEAEVLLSKMENNG------IIPDAVTYETIIRALFRKDENEKAEK 535
Query: 432 FL 433
L
Sbjct: 536 LL 537
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 68/347 (19%), Positives = 125/347 (36%), Gaps = 73/347 (21%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLM------------------ 165
+T+ L+NCYC A ++ K+ +L +++ FN+L+
Sbjct: 95 VTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDH 154
Query: 166 --------------TL---YAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVND 208
TL K G ++++++ + D YN+ + +L
Sbjct: 155 VIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKA 214
Query: 209 ISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQ 268
+S A ++ EM R++ D TF++L + G ++A E+ +N + D+ +
Sbjct: 215 VSDAYQLYSEMITK-RISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFS 273
Query: 269 FLITLYGQTGNLSEVYRI---------------WRSL---------------------RL 292
L+ + GN++ + + SL RL
Sbjct: 274 ILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRL 333
Query: 293 AFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLEN 352
A+ SY MI L +K + A FKE D N +I K GR+
Sbjct: 334 GVAPHAH-SYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISY 392
Query: 353 AEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
A +L + G + T+ D +N + A+ ++K D G
Sbjct: 393 AWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQG 439
>gi|255661158|gb|ACU25748.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 426
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 121/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 6 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 65
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S PD YN + A +I EM+ G V + ++S L ++Y
Sbjct: 66 IFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAG-VTPNTASYSTLLTMY 124
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ +R
Sbjct: 125 VENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 245 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 284
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 109/221 (49%), Gaps = 20/221 (9%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML 276
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S + D Y + A ++ A+R++ E+KR + D I
Sbjct: 277 FQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAI-----HILA 331
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + +D++ ++ +I L Y + GN+ EV+ R L FP++
Sbjct: 332 GAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGY-FPDS 390
Query: 298 ANISYLNMIQVLVN----LKDLPGAEKCFKEW-ESGCATYD 333
N+I +++N L + A + E E GC D
Sbjct: 391 ------NVIALVLNAYGKLHEFDKANDVYMEMQEVGCVFSD 425
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 8/202 (3%)
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
++ PD YTY+ + A +++M++D RV D +SNL + + + K
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNM 305
A L+ DL AY +I ++G+ E + +R A PNTA SY +
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTA--SYSTL 120
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
+ + V K A F E D+ N+MI Y + G + A++L R+ G
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180
Query: 366 DPNAKTWEIFSDYYLRNGDMKL 387
+PN ++ Y GD +L
Sbjct: 181 EPNVVSYNTLLRVY---GDAEL 199
>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Glycine max]
Length = 693
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 158/369 (42%), Gaps = 19/369 (5%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNH----LTYGSL 129
A ++ E M RG V +D + K + A F+ L S+NH LTY ++
Sbjct: 291 AFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVR-SENHKPNVLTYTAM 349
Query: 130 LNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
++ YC++ +AE LL +MKE L ++ + +L+ + K G+ E+ ++ M
Sbjct: 350 ISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGF 409
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
P+ TYN + L + A +V++ R+G + AD T++ L S + + ++A
Sbjct: 410 SPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNG-LDADKVTYTILISEHCKQAEIKQAL 468
Query: 250 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW-RSLRLAFPNTANISYLNMIQV 308
++ D+ +Y LI ++ + + E + ++R T N +Y +MI
Sbjct: 469 VLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPT-NKTYTSMICG 527
Query: 309 LVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
+L A K F + GCA+ D +I K+ +L+ A L + +G P
Sbjct: 528 YCREGNLRLALKFFHRMSDHGCAS-DSITYGALISGLCKQSKLDEARCLYDAMIEKGLTP 586
Query: 368 NAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVD 427
T + Y + D A+ LE R + WV T+ T +R E+ V
Sbjct: 587 CEVTRVTLAYEYCKIDDGCSAMVVLE------RLEKKLWV---RTVNTLVRKLCSERKVG 637
Query: 428 GAEGFLEIL 436
A F L
Sbjct: 638 MAALFFHKL 646
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/302 (18%), Positives = 111/302 (36%), Gaps = 35/302 (11%)
Query: 133 YCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPD 192
+C++ +A + E+ L + + F ++ K G ++ +++EM P+
Sbjct: 247 FCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPN 306
Query: 193 SYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERAL 252
YT+ + L A R+ ++ R + T++ + S Y +AE L
Sbjct: 307 VYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLL 366
Query: 253 KELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI-------------------------- 286
++ + + + Y LI + + GN Y +
Sbjct: 367 SRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKK 426
Query: 287 ------WRSLRLAFPNTAN---ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVT 337
++ L+ F N + ++Y +I ++ A F + DI
Sbjct: 427 GRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSY 486
Query: 338 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
+I + +E R++ +E E A R G P KT+ Y R G+++LA+ + D
Sbjct: 487 TTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSD 546
Query: 398 TG 399
G
Sbjct: 547 HG 548
>gi|242095042|ref|XP_002438011.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
gi|241916234|gb|EER89378.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
Length = 1443
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 131/284 (46%), Gaps = 26/284 (9%)
Query: 109 AENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMT 166
AE F +L E + +TY SLL + KE +K E E++ + + + +N+++
Sbjct: 347 AERLFGELVEKGFMPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNEITYNTMIH 406
Query: 167 LYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA 226
+Y K G + + EM+A PD+ TY V + +L ++ I+ A +V+E+M D +
Sbjct: 407 MYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEAGKVLEDMA-DAGLK 465
Query: 227 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
FS L Y + G AE+ + D AY ++ ++ ++G ++ R+
Sbjct: 466 PTLVAFSALICAYAKGGRRADAEKTFDCMIASGVKPDRLAYLVMLDVFARSGETEKMLRL 525
Query: 287 WRSLRLAFPNTANISYL---NMIQVLVNLKDLPGAEKC------FKEWESGCATYDIRVT 337
+R++ N +Y +M QVL L L +KC ++ E C ++
Sbjct: 526 YRTM-------MNDNYRPDDDMYQVL--LVALAKEDKCEEIEEIIQDMELLCQMSLGVIS 576
Query: 338 NVMIGAYAKEGRLENAEELKERARRRGADPNAKT-WEIFSDYYL 380
++I A + +L ++A +G P+AK+ W I + Y +
Sbjct: 577 TILIKARC----VSQGGKLLKKACLQGYKPDAKSLWSIMNAYVM 616
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 117/263 (44%), Gaps = 3/263 (1%)
Query: 124 LTYGSLLNCYCKE--LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+++ +L+N K L A LL ++++ L + +N+L++ +++ + E +
Sbjct: 257 VSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVF 316
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+EM AS PD +TYN + AER+ E+ G D T+++L + +
Sbjct: 317 EEMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFGELVEKG-FMPDAVTYNSLLYAFAK 375
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G +K E +EL ++ Y +I +YG+ G L ++ +R ++
Sbjct: 376 EGNVDKVEHTCEELVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVT 435
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y MI L + + A K ++ + + +I AYAK GR +AE+ +
Sbjct: 436 YTVMIDSLGKMDKIAEAGKVLEDMADAGLKPTLVAFSALICAYAKGGRRADAEKTFDCMI 495
Query: 362 RRGADPNAKTWEIFSDYYLRNGD 384
G P+ + + D + R+G+
Sbjct: 496 ASGVKPDRLAYLVMLDVFARSGE 518
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 125/304 (41%), Gaps = 6/304 (1%)
Query: 94 AIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELN 153
A+ L ++ + + AE F+ + +++ Y + + A LL+ M +
Sbjct: 192 AVVLGVLGRARQDSIAEEVFLRFAGEGATVQVFNAMMGVYARSGRFDDARQLLDTMHDRG 251
Query: 154 LGFSSMPFNSLMTLYAKTGHPEKIPA--IIQEMKASSIMPDSYTYNVWMRALAAVNDISG 211
+ + FN+L+ +K+G A ++ E++ S + PD TYN + A + +++
Sbjct: 252 IDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLED 311
Query: 212 AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 271
A V EEM D T++ + S++ G E+AER EL + D Y L+
Sbjct: 312 AVTVFEEMIA-SECRPDLWTYNAMVSVHGRCGKAEEAERLFGELVEKGFMPDAVTYNSLL 370
Query: 272 TLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCAT 331
+ + GN+ +V L A I+Y MI + + L A + E + T
Sbjct: 371 YAFAKEGNVDKVEHTCEELVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAVGCT 430
Query: 332 YDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG---DMKLA 388
D VMI + K ++ A ++ E G P + Y + G D +
Sbjct: 431 PDAVTYTVMIDSLGKMDKIAEAGKVLEDMADAGLKPTLVAFSALICAYAKGGRRADAEKT 490
Query: 389 VDCL 392
DC+
Sbjct: 491 FDCM 494
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 95/236 (40%), Gaps = 1/236 (0%)
Query: 148 KMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVN 207
++++++ S ++ +AK G ++ I MKA+ +P+ + Y L N
Sbjct: 840 ELQDMDFKISKSTVLLMLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMTSLLCHHN 899
Query: 208 DISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAY 267
E +I EM+ G D + F++L ++Y AG F++ + + + D Y
Sbjct: 900 RFRDVELMIAEMEGAG-FKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTY 958
Query: 268 QFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES 327
LI +Y ++ E + + + SY +++ + A++ F+E S
Sbjct: 959 NTLIVMYCRSLRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMRS 1018
Query: 328 GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
+ + ++M+ Y G AE L + G +P T I Y G
Sbjct: 1019 KSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAG 1074
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 75/177 (42%), Gaps = 1/177 (0%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
+ SLLN Y ++ + + + E L +N+L+ +Y ++ PE+ ++ EM
Sbjct: 923 FNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIVMYCRSLRPEEGFTLLNEMG 982
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
+ P +Y + A A A+++ EEM R + + + + IY AG
Sbjct: 983 KRGLTPKLQSYKSLLAASAKAELREQADQLFEEM-RSKSYQLNRSIYHMMMKIYRNAGNH 1041
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY 302
KAE L ++ ++ L+T YG G E + SL+ + + + Y
Sbjct: 1042 SKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPHEAENVLNSLKSSSLEVSTLPY 1098
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 1/155 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY +L+ YC+ L E+ LL +M + L + SL+ AK E+ + +EM
Sbjct: 957 TYNTLIVMYCRSLRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEM 1016
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
++ S + Y++ M+ + S AE ++ MK DG + T L + Y AG
Sbjct: 1017 RSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDG-IEPTIATMHILMTSYGTAGQ 1075
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGN 279
+AE L L++ + Y + Y + G+
Sbjct: 1076 PHEAENVLNSLKSSSLEVSTLPYSTVFDAYLKNGD 1110
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 119/303 (39%), Gaps = 64/303 (21%)
Query: 105 GIDAAENYF---------VDLPETSK----NHLTYGSLLNCY-CKELMTE---------K 141
GI+A++N + + PET+ + L G LN C+ ++ E +
Sbjct: 705 GIEASKNIYESIISTYCKLGFPETAHGLMDDALQSGIPLNILSCRVIIIEAYGNIKLWQQ 764
Query: 142 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 201
AE L++ +++ + G +N+L+ YA++G EK A+ M + +P + N MR
Sbjct: 765 AEILVKGLRQAS-GIDRRIWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMR 823
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 261
AL DGR L +YV G EL++ +
Sbjct: 824 ALIV----------------DGR----------LDELYVVVG----------ELQDMDFK 847
Query: 262 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPGAE 319
S ++ + + G++ EV +I+ ++ A PN Y +M +L + E
Sbjct: 848 ISKSTVLLMLDAFAKAGDVFEVMKIYNGMKAAGYLPNMH--LYRSMTSLLCHHNRFRDVE 905
Query: 320 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 379
E E D+ + N ++ Y G + ++ + G +P+ T+ Y
Sbjct: 906 LMIAEMEGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIVMY 965
Query: 380 LRN 382
R+
Sbjct: 966 CRS 968
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 86/219 (39%), Gaps = 5/219 (2%)
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
E A S P S V + L S AE V +G A F+ + +Y +
Sbjct: 178 EWLARSTAPASRAVAVVLGVLGRARQDSIAEEVFLRFAGEG---ATVQVFNAMMGVYARS 234
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE--VYRIWRSLRLAFPNTANI 300
G F+ A + L + +R DL ++ LI ++G L+ + +R + I
Sbjct: 235 GRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRPDVI 294
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
+Y +I +L A F+E + D+ N M+ + + G+ E AE L
Sbjct: 295 TYNTLISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFGEL 354
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+G P+A T+ + + G++ E+ + G
Sbjct: 355 VEKGFMPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAG 393
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/259 (18%), Positives = 107/259 (41%), Gaps = 11/259 (4%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N Y S+ + C E ++ +M+ FNSL+ +Y G+ ++ +
Sbjct: 884 NMHLYRSMTSLLCHHNRFRDVELMIAEMEGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVY 943
Query: 182 QEMKASSIMPDSYTYN----VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
Q + + + PD TYN ++ R+L + ++ EM + G + ++ +L +
Sbjct: 944 QSILEAGLEPDEDTYNTLIVMYCRSLRPEEGFT----LLNEMGKRG-LTPKLQSYKSLLA 998
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
+A L E+A++ +E+ +++ + S Y ++ +Y GN S+ + ++
Sbjct: 999 ASAKAELREQADQLFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMK-EDGIE 1057
Query: 298 ANISYLNMIQVLVNLKDLPG-AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
I+ ++++ P AE +S + + AY K G + +
Sbjct: 1058 PTIATMHILMTSYGTAGQPHEAENVLNSLKSSSLEVSTLPYSTVFDAYLKNGDYDLGIKK 1117
Query: 357 KERARRRGADPNAKTWEIF 375
+R G +P+ + W F
Sbjct: 1118 LLEMKRDGVEPDHQVWTCF 1136
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 70/170 (41%), Gaps = 6/170 (3%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK--NHLTYGSLLN 131
L M KRG+ + L AK + + A+ F ++ S N Y ++
Sbjct: 974 GFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMRSKSYQLNRSIYHMMMK 1033
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
Y KAE LL MKE + + + LMT Y G P + ++ +K+SS+
Sbjct: 1034 IYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPHEAENVLNSLKSSSLEV 1093
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAAD---WTTFSNLASI 238
+ Y+ A D + + EMKRDG V D WT F AS+
Sbjct: 1094 STLPYSTVFDAYLKNGDYDLGIKKLLEMKRDG-VEPDHQVWTCFIRAASL 1142
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 116/256 (45%), Gaps = 5/256 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ +TY +L+N YCKE +A L +M L + + + SL+ K G+ +
Sbjct: 87 DEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFF 146
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+M + P+ TY + A + A RV+ EM R G + + T++ L + +
Sbjct: 147 DQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPS-IVTYNALINGHCV 205
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTAN 299
G E+A L+++ + D+ +Y +I+ + + L +++ + + P+
Sbjct: 206 LGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDA-- 263
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
++Y ++IQ L + L A F+E + D +I AY KEG L A L +
Sbjct: 264 VTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDE 323
Query: 360 ARRRGADPNAKTWEIF 375
++G P+A T+ +
Sbjct: 324 MIQKGFLPDAVTYNVL 339
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/308 (20%), Positives = 127/308 (41%), Gaps = 7/308 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY ++++ YCK T++A L M L + + FN ++ + G ++ ++
Sbjct: 17 NVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEVL 76
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EM +PD TYN + + A + EM R+G ++ + T+++L + +
Sbjct: 77 VEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNG-LSPNVVTYTSLINSMCK 135
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
AG +A ++ R + Y +I + Q G L E YR+ + + + ++
Sbjct: 136 AGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVT 195
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I L + A ++ D+ + +I +A+ L+ A ++K
Sbjct: 196 YNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMI 255
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
+ P+A T+ + A D ++ + K P T T + +
Sbjct: 256 GKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTI------KLPPDEFTYTTLINAYC 309
Query: 422 QEKDVDGA 429
+E D++ A
Sbjct: 310 KEGDLNKA 317
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 140/317 (44%), Gaps = 22/317 (6%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
A+ L ++M +G+ V + + A+ Q +D A V++ S + +TY SL+
Sbjct: 212 AIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQ 271
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C++ +A + ++M + L + +L+ Y K G K + EM +P
Sbjct: 272 GLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLP 331
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRV--AADWTTF-SNLASI---------- 238
D+ TYNV + L A R++ ++ D + A + T N +I
Sbjct: 332 DAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVK 391
Query: 239 -YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL-RLAF-P 295
+ GL ++A++ + + N+N + + Y +I + + GN+ + Y++++ + + F P
Sbjct: 392 GFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVP 451
Query: 296 NTANISYLNMIQVLVNLKDLPG-AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAE 354
+T ++ L +++ L + + G + + C D ++ V++ KEG ++
Sbjct: 452 HT--VTVLALVKALFT-EGMDGELNEVIGDILRSCKLTDAELSKVLVEINQKEGNMDMVF 508
Query: 355 ELKERARRRGADPNAKT 371
L + G P+ T
Sbjct: 509 NLLTEMAKDGLIPSTGT 525
>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
Length = 973
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 101/224 (45%), Gaps = 1/224 (0%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
++ LM + K E + +++EM+A + P+ Y+Y + +R L A R++ +M+
Sbjct: 233 YSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKME 292
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
+G D T + L + +AG A+ +++ + D Y L+ +G G+
Sbjct: 293 NEG-CKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDS 351
Query: 281 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 340
V IW +++ N ++Y +I L + + A + F E + + N +
Sbjct: 352 QSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSL 411
Query: 341 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 384
I + K R +A EL + G PN T +F +YY ++G+
Sbjct: 412 ISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGE 455
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 132/339 (38%), Gaps = 50/339 (14%)
Query: 62 LKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS- 120
L K D +++ M+ G N V +D + +V + A F ++ +
Sbjct: 342 LDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGI 401
Query: 121 -KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNL------GFSSMPFNSLMTLYAKTGH 173
+Y SL++ + K ++ LE K +++ G++ + F + Y K+G
Sbjct: 402 VPEQYSYNSLISGFLK---ADRFGDALELFKHMDIHGPKPNGYTHVLF---INYYGKSGE 455
Query: 174 PEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFS 233
K + MK+ I+PD N + LA + A+RV E+K G V+ D T++
Sbjct: 456 SIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMG-VSPDTITYT 514
Query: 234 NLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 293
+ +A F++A + ++ N D+ A LI + G E +RI+ L+
Sbjct: 515 MMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKE- 573
Query: 294 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
+NL+ G TY N ++ +EG+++
Sbjct: 574 ----------------MNLEPTDG-------------TY-----NTLLAGLGREGKVKEV 599
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 392
L E PN T+ D +NG + A+D L
Sbjct: 600 MHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDML 638
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 97/250 (38%), Gaps = 38/250 (15%)
Query: 129 LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS 188
L+ CK+ +A L++K K + + +NSL+ + + EMK
Sbjct: 761 LIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELG 820
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
PD +TYN+ + A+ I +V EEM R G + + T++ + S V++ E+A
Sbjct: 821 CGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKG-YESTYVTYNTIISGLVKSRRLEQA 879
Query: 249 ERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQV 308
I LY + + F T +Y ++
Sbjct: 880 ----------------------IDLY------------YNLMSQGFSPTP-CTYGPLLDG 904
Query: 309 LVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
L+ + AE F E E GC + + N+++ + G E L + +G +P
Sbjct: 905 LLKAGRIEDAENLFNEMLEYGCKA-NCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINP 963
Query: 368 NAKTWEIFSD 377
+ K++ I D
Sbjct: 964 DIKSYTIIID 973
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 120/288 (41%), Gaps = 11/288 (3%)
Query: 72 YPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGID----AAENY-FVDLPETSKNHLTY 126
+ AL++ + M+++G+ V +Q + L++ D A E + +D+ N T+
Sbjct: 387 FEALEMFDEMKQKGI---VPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTH 443
Query: 127 GSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKA 186
+N Y K + KA E MK + + N+++ AK+G + E+KA
Sbjct: 444 VLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKA 503
Query: 187 SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE 246
+ PD+ TY + ++ + + A ++ +M + V D ++L +AG +
Sbjct: 504 MGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCV-PDVLAVNSLIDTLYKAGRGD 562
Query: 247 KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI 306
+A R +L+ N Y L+ G+ G + EV + + + I+Y ++
Sbjct: 563 EAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTIL 622
Query: 307 QVLVNLKDLPGA-EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
L + A + + GC D+ N +I KE R A
Sbjct: 623 DCLCKNGAVNDALDMLYSMTTKGCIP-DLSSYNTVIYGLVKEERYNEA 669
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 66/165 (40%), Gaps = 1/165 (0%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y SL+ E + + AE L +MKEL G +N L+ K+ E++ + +EM
Sbjct: 793 YNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMH 852
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
TYN + L + A + + G + T+ L ++AG
Sbjct: 853 RKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQG-FSPTPCTYGPLLDGLLKAGRI 911
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
E AE E+ + + Y L+ + GN +V +++ +
Sbjct: 912 EDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDM 956
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Query: 75 LKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLNC 132
LK+ E M ++G T + + K + ++ A + + +L S TYG LL+
Sbjct: 845 LKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDG 904
Query: 133 YCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPD 192
K E AE L +M E + +N L+ + G+ EK+ + Q+M I PD
Sbjct: 905 LLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPD 964
Query: 193 SYTYNV 198
+Y +
Sbjct: 965 IKSYTI 970
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 3/168 (1%)
Query: 106 IDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNS 163
ID AE F ++ E + TY LL+ K + E+ + E+M + + +N+
Sbjct: 806 IDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNT 865
Query: 164 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
+++ K+ E+ + + + P TY + L I AE + EM G
Sbjct: 866 IISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYG 925
Query: 224 RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 271
A+ T ++ L + + AG EK +++ ++ + D+ +Y +I
Sbjct: 926 -CKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIII 972
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 95/233 (40%), Gaps = 4/233 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A++ E M+ +G+ V L +AK + A+ F +L S + +TY ++
Sbjct: 459 AIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIK 518
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C K ++A + M E N + NSL+ K G ++ I ++K ++ P
Sbjct: 519 CCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEP 578
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
TYN + L + ++EEM + T++ + + G A
Sbjct: 579 TDGTYNTLLAGLGREGKVKEVMHLLEEMYHS-NYPPNLITYNTILDCLCKNGAVNDALDM 637
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL-RLAFPNTANISYL 303
L + + DLS+Y +I + +E + I+ + ++ P+ A + +
Sbjct: 638 LYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTI 690
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 48/254 (18%), Positives = 101/254 (39%), Gaps = 3/254 (1%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY +LL +E ++ LLE+M N + + +N+++ K G ++ M
Sbjct: 582 TYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSM 641
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+PD +YN + L + A + +MK+ + D+ T + +V+ GL
Sbjct: 642 TTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKK--VLIPDYATLCTILPSFVKIGL 699
Query: 245 FEKAERALKE-LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
++A +K+ + D S+ L+ + + + + + +
Sbjct: 700 MKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLC 759
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I+ L K A + K+++S + + N +I E ++ AE L +
Sbjct: 760 PLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKEL 819
Query: 364 GADPNAKTWEIFSD 377
G P+ T+ + D
Sbjct: 820 GCGPDEFTYNLLLD 833
>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 450
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 140/332 (42%), Gaps = 15/332 (4%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+T+ +L+N C E +A AL+ KM L + + +++ K G + ++ +
Sbjct: 11 ITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSK 70
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ + I PD Y+ + L S A+ + EM G +A + T++ + + G
Sbjct: 71 MEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG-IAPNVFTYNCMIDGFCSFG 129
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANIS 301
+ A+R L+++ R + D+ + LI+ + G L E ++ + R FP+T ++
Sbjct: 130 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT--VT 187
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +MI A+ F A+ D+ N +I Y + R++ +L
Sbjct: 188 YNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 243
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
RRG N T+ + ++ A D ++ I G P + T + F
Sbjct: 244 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG------VCPDTITCNILLYGFC 297
Query: 422 QEKDVDGAEGFLEILKKAVDDLGVEVFEPLIR 453
+ + ++ A E+++ + DL + +I
Sbjct: 298 ENEKLEEALELFEVIQMSKIDLDTVAYNIIIH 329
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/370 (20%), Positives = 147/370 (39%), Gaps = 20/370 (5%)
Query: 62 LKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--T 119
+ K+ D K AL L ME+ + V + +D + K A+ F ++ E
Sbjct: 55 MCKMGDTK---SALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI 111
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
+ N TY +++ +C A+ LL M E + + FN+L++ K G +
Sbjct: 112 APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEK 171
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+ EM I PD+ TYN + N A+ + + M + D TF+ + +Y
Sbjct: 172 LCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA-----SPDVVTFNTIIDVY 226
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNT 297
A ++ + L+E+ R + + Y LI + + NL+ +++ + P+T
Sbjct: 227 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDT 286
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
+ L + + L A + F+ + D N++I K +++ A +L
Sbjct: 287 ITCNIL--LYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 344
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 417
G +P+ +T+ + + + A K D G P + T T +
Sbjct: 345 CSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHE------PDNSTYNTLI 398
Query: 418 RHFEQEKDVD 427
R + ++D
Sbjct: 399 RGCLKAGEID 408
>gi|255661160|gb|ACU25749.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 426
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 121/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 6 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 65
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S PD YN + A +I EM+ G V + ++S L ++Y
Sbjct: 66 IFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAG-VTPNTASYSTLLTMY 124
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ +R
Sbjct: 125 VENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 245 MQNRGIEPNSITYSTIISIWGKVGKLDKAAMLFQKLRSSG 284
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 108/221 (48%), Gaps = 20/221 (9%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ ++++++++ K G +K +
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDKAAML 276
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S + D Y + A ++ A+R++ E+KR + D I
Sbjct: 277 FQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAI-----HILA 331
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + +D++ ++ +I L Y + GN+ EV+ R L FP +
Sbjct: 332 GAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGY-FPES 390
Query: 298 ANISYLNMIQVLVN----LKDLPGAEKCFKEW-ESGCATYD 333
N+I +++N L + A + E E GC D
Sbjct: 391 ------NVIALVLNAYGKLHEFDKANDVYMEMQEVGCVFSD 425
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 8/202 (3%)
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
++ PD YTY+ + A +++M++D RV D +SNL + + + K
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNM 305
A L+ DL AY +I ++G+ E + +R A PNTA SY +
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTA--SYSTL 120
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
+ + V K A F E D+ N+MI Y + G + A++L R+ G
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180
Query: 366 DPNAKTWEIFSDYYLRNGDMKL 387
+PN ++ Y GD +L
Sbjct: 181 EPNVVSYNTLLRVY---GDAEL 199
>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 908
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 140/335 (41%), Gaps = 12/335 (3%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLNCYCKELM 138
M +RG+N I +D + +D A YF + E S +Y S++NC CK
Sbjct: 391 MAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGK 450
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
+ AE L ++M + L + + SL++ Y K G K + EM I P++ T+
Sbjct: 451 MKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTA 510
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
+ L +N ++ A ++ +EM + ++ + T++ L + G +A L E+ +
Sbjct: 511 LICGLCQINKMAEASKLFDEMV-ELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKK 569
Query: 259 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 318
D Y+ LI TG +SE L + Y ++Q + A
Sbjct: 570 GLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEA 629
Query: 319 EKCFKEWESGCATYDIRVTNVMI-GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 377
+E D+ V+I GA + R+ EL +G P+ + I D
Sbjct: 630 LVARQEMVGRGLQMDLVSYAVLISGALNQNDRI--LFELLREMHGKGMQPDNVIYTILID 687
Query: 378 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSET 412
++++G++K A + I G +VP+S T
Sbjct: 688 GFIKSGNLKKAFEFWYIMIGEG------YVPNSVT 716
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 126/278 (45%), Gaps = 18/278 (6%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
+ N +T+ +L+ C+ +A L ++M EL + + + +N L+ + + G+ +
Sbjct: 502 APNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFE 561
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
++ EM + PD+YTY + L + +S A+ I ++ + D ++ L +
Sbjct: 562 LLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQ-RLDELCYTALLQGF 620
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE----VYRIWRSLRLAFP 295
+ G ++A A +E+ R DL +Y LI+ G L++ ++ + R +
Sbjct: 621 CKEGRIKEALVARQEMVGRGLQMDLVSYAVLIS-----GALNQNDRILFELLREMHGKGM 675
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEW----ESGCATYDIRVTNVMIGAYAKEGRLE 351
N+ Y +I + +L +K F+ W G + T ++ G + K G +
Sbjct: 676 QPDNVIYTILIDGFIKSGNL---KKAFEFWYIMIGEGYVPNSVTYTALVNGLF-KAGYVN 731
Query: 352 NAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 389
A+ L +R A PN T+ F D+ + G+M+ A+
Sbjct: 732 EAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENAL 769
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 103/276 (37%), Gaps = 47/276 (17%)
Query: 97 LDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGF 156
+L+ KV + N FV Y S++N CK E+AE L M E L
Sbjct: 350 FELLNKVGKLGVVPNLFV-----------YNSMINSLCKTGKLEEAELLFSVMAERGLNP 398
Query: 157 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
+ + + L+ + + + +M I Y+YN + + AE +
Sbjct: 399 NDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLF 458
Query: 217 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 276
+EM G + T+++L S Y + GL KA + E+ + + + LI Q
Sbjct: 459 KEMVDKG-LKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQ 517
Query: 277 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 336
++E +++ +V LK LP TY
Sbjct: 518 INKMAEASKLFDE-------------------MVELKILPNE-----------VTY---- 543
Query: 337 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
NV+I + +EG A EL + ++G P+ T+
Sbjct: 544 -NVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTY 578
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 102/241 (42%), Gaps = 5/241 (2%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
++L+ A+ ++ + + + + PD Y Y V ++ L + D + A+ +I + +
Sbjct: 193 LSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAE 252
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
+G + T++ + ++ +A + L + DL Y L+ +
Sbjct: 253 GNG-CSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEF 311
Query: 281 SEVYRIW-RSLRLAF-PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 338
+ + L + P+ A +S +I+ L+ + + GA + + ++ V N
Sbjct: 312 EVGMEMMDEMIELGYVPSEAAVS--GLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYN 369
Query: 339 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 398
MI + K G+LE AE L RG +PN T+ I D + R + +A K I+
Sbjct: 370 SMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIEC 429
Query: 399 G 399
G
Sbjct: 430 G 430
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 71/166 (42%), Gaps = 2/166 (1%)
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
E NH+TYG L+ KE E A L M + + +++ +N L+ Y + G ++
Sbjct: 744 EAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSFA-NTVTYNILIRGYCQIGKFQEA 802
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
++ M ++PD TY+ ++ ++ A + E M + G + D F+ L
Sbjct: 803 AKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRG-LKPDRVVFNFLIH 861
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 283
G ++A + ++ R S Y L+ Q L++V
Sbjct: 862 ACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARLTQV 907
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 63/322 (19%), Positives = 131/322 (40%), Gaps = 13/322 (4%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQG---IDAAENYFVDLPETSK--NHLTYGS 128
A +L + M K+G++ D + L+A + + A+ + DL + + L Y +
Sbjct: 559 AFELLDEMIKKGLS---PDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTA 615
Query: 129 LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS 188
LL +CKE ++A ++M L + + L++ A + + +++EM
Sbjct: 616 LLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLIS-GALNQNDRILFELLREMHGKG 674
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
+ PD+ Y + + ++ A M +G V + T++ L + +AG +A
Sbjct: 675 MQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVP-NSVTYTALVNGLFKAGYVNEA 733
Query: 249 ERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS-LRLAFPNTANISYLNMIQ 307
+ K + A + Y + + GN+ ++ + L+ +F NT ++Y +I+
Sbjct: 734 KLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSFANT--VTYNILIR 791
Query: 308 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
+ A K D + I Y K G ++ A ++ E +RG P
Sbjct: 792 GYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKP 851
Query: 368 NAKTWEIFSDYYLRNGDMKLAV 389
+ + NG++ A+
Sbjct: 852 DRVVFNFLIHACCLNGELDRAL 873
>gi|357138611|ref|XP_003570884.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Brachypodium distachyon]
Length = 864
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 87/433 (20%), Positives = 172/433 (39%), Gaps = 65/433 (15%)
Query: 106 IDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLM 165
+D A F +P ++N + G L YC+ + A A+L+ M E+NL + N+++
Sbjct: 159 MDLARRVFDAMP--ARNEFSSGILARGYCRAGRSADALAVLDAMPEMNL----VVCNTVV 212
Query: 166 TLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR---D 222
+ + G ++ ++ M+A + P+ T+N + AL + A R+ +M+
Sbjct: 213 AGFCREGRVDEAERLVDRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIFNDMQEAWEQ 272
Query: 223 GRVAADWTTFSNLASIYVEAGLFEKA---------------------------------- 248
G D TF + S + +AG+ ++A
Sbjct: 273 GLPRPDQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRVGE 332
Query: 249 -ERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 307
+ L E+ + + Y ++ + G +V R+ +R ++Y +++
Sbjct: 333 AQELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRVEDFVRSGVMTPDVVTYTSLLH 392
Query: 308 VLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD 366
+ + A + E + GCA ++ NV++ + K GR E L ER +G
Sbjct: 393 AYCSKGNTTAANRILDEMAQKGCAP-NLFTYNVLLQSLLKAGRTTEVERLLERMSEKGYS 451
Query: 367 PNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGD----GGKWV-------------PS 409
+ + I D RN +++A+D ++ + GR G +V P
Sbjct: 452 LDTASCNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNSFVSLVSDSSISKSCLPD 511
Query: 410 SETIRTFMRHFEQEKDVDGA-EGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRR 468
T T M +E D A + +E++ K + V +++ I Y G+TS +
Sbjct: 512 RITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSV-IYDTFIHGYCMHGKTSLAIKVL 570
Query: 469 LKMEKVEVSEASK 481
MEK + +++
Sbjct: 571 RDMEKRSCNPSTR 583
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 85/464 (18%), Positives = 178/464 (38%), Gaps = 73/464 (15%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET------SKNHLTYG 127
A +L + M +G+ V + + K + A F D+ E + +T+
Sbjct: 224 AERLVDRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIFNDMQEAWEQGLPRPDQVTFD 283
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 187
+L+ +C M ++A L++ M+ +N ++ K G + ++ EM
Sbjct: 284 VMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRVGEAQELLSEMAHE 343
Query: 188 SIMPDSYTYNV-----------------------------------WMRALAAVNDISGA 212
+ P+SYTYN+ + A + + + A
Sbjct: 344 GVQPNSYTYNIIVDGLCKEGKAFDVRRVEDFVRSGVMTPDVVTYTSLLHAYCSKGNTTAA 403
Query: 213 ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLIT 272
R+++EM + G A + T++ L ++AG + ER L+ + + D ++ +I
Sbjct: 404 NRILDEMAQKG-CAPNLFTYNVLLQSLLKAGRTTEVERLLERMSEKGYSLDTASCNIIID 462
Query: 273 LYGQTGNLSEVYRI----WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESG 328
+ L I W RLA N S+++++ D ++ C +
Sbjct: 463 GLCRNSKLEMAMDIVDGMWNEGRLALRRLGN-SFVSLVS------DSSISKSCLPD---- 511
Query: 329 CATYDIRVT-NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKL 387
R+T + ++ A KEGR + A++ + P++ ++ F Y +G L
Sbjct: 512 ------RITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSL 565
Query: 388 AVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEV 447
A+ L + PS+ + + F++++ D + +K+ V
Sbjct: 566 AIKVLRDM------EKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKGISSNVMT 619
Query: 448 FEPLIRTYAAAG---RTSPVMLRRLKMEKVEVSEASKKLLEAIC 488
+ LI+++ G + P++ L+ E V + L++A C
Sbjct: 620 YNSLIKSFCGRGMVNKAMPLLDEMLQNEIVPNVTSFGLLIKAFC 663
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/308 (19%), Positives = 120/308 (38%), Gaps = 22/308 (7%)
Query: 113 FVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTG 172
FV + + +TY SLL+ YC + T A +L++M + + +N L+ K G
Sbjct: 374 FVRSGVMTPDVVTYTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAG 433
Query: 173 HPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA------ 226
++ +++ M D+ + N+ + L + + A +++ M +GR+A
Sbjct: 434 RTTEVERLLERMSEKGYSLDTASCNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGN 493
Query: 227 ----------------ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 270
D T+S L + + G F++A++ L E+ ++ D Y
Sbjct: 494 SFVSLVSDSSISKSCLPDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTF 553
Query: 271 ITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCA 330
I Y G S ++ R + N + SY +I + K E +
Sbjct: 554 IHGYCMHGKTSLAIKVLRDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKGI 613
Query: 331 TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
+ ++ N +I ++ G + A L + + PN ++ + + + D A
Sbjct: 614 SSNVMTYNSLIKSFCGRGMVNKAMPLLDEMLQNEIVPNVTSFGLLIKAFCKTADFSAAQR 673
Query: 391 CLEKAIDT 398
+ A+ T
Sbjct: 674 VFDVALST 681
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 86/184 (46%), Gaps = 8/184 (4%)
Query: 111 NYFVDLPETSK-------NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNS 163
N FV L S + +TY +L+N CKE ++A+ L +M ++ S+ +++
Sbjct: 493 NSFVSLVSDSSISKSCLPDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDT 552
Query: 164 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
+ Y G ++++M+ S P + +YN+ + +++ EMK G
Sbjct: 553 FIHGYCMHGKTSLAIKVLRDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKG 612
Query: 224 RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 283
++++ T+++L + G+ KA L E+ +++++ LI + +T + S
Sbjct: 613 -ISSNVMTYNSLIKSFCGRGMVNKAMPLLDEMLQNEIVPNVTSFGLLIKAFCKTADFSAA 671
Query: 284 YRIW 287
R++
Sbjct: 672 QRVF 675
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/242 (18%), Positives = 103/242 (42%), Gaps = 2/242 (0%)
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
+ S + + Y + ++ YC T A +L M++ + S+ +N L+ + + ++I
Sbjct: 542 DISPDSVIYDTFIHGYCMHGKTSLAIKVLRDMEKRSCNPSTRSYNLLIWGFQEKQKSDEI 601
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
++ EMK I + TYN +++ ++ A +++EM ++ + + T+F L
Sbjct: 602 LKLMSEMKEKGISSNVMTYNSLIKSFCGRGMVNKAMPLLDEMLQN-EIVPNVTSFGLLIK 660
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
+ + F A+R + +++ Y + T E I + +
Sbjct: 661 AFCKTADFSAAQRVFDVALSTCGQKEV-LYCLMCTELSTYARWIEAKNILETALEMRISI 719
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
+ Y +I L ++ + A K + + ++D +I A ++ G+ +A+ L
Sbjct: 720 QSFPYKRIIAGLCDVSEADHAHSLLKLFIAKGYSFDPATFMPVIDALSESGKKHDADMLS 779
Query: 358 ER 359
E+
Sbjct: 780 EK 781
>gi|255661162|gb|ACU25750.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 426
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 121/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 6 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 65
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S PD YN + A +I EM+ G V + ++S L ++Y
Sbjct: 66 IFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAG-VTPNTASYSTLLTMY 124
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ +R
Sbjct: 125 VENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 245 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 284
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 109/221 (49%), Gaps = 20/221 (9%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML 276
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S + D Y + A ++ A+R++ E+KR + D I
Sbjct: 277 FQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAI-----HILA 331
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + +D++ ++ +I L Y + GN+ EV+ R L FP++
Sbjct: 332 GAGRXEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGY-FPDS 390
Query: 298 ANISYLNMIQVLVN----LKDLPGAEKCFKEW-ESGCATYD 333
N+I +++N L + A + E E GC D
Sbjct: 391 ------NVIALVLNAYGKLHEFDKANDVYMEMQEVGCVFSD 425
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 8/202 (3%)
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
++ PD YTY+ + A +++M++D RV D +SNL + + + K
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNM 305
A L+ DL AY +I ++G+ E + +R A PNTA SY +
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTA--SYSTL 120
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
+ + V K A F E D+ N+MI Y + G + A++L R+ G
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180
Query: 366 DPNAKTWEIFSDYYLRNGDMKL 387
+PN ++ Y GD +L
Sbjct: 181 EPNVVSYNTLLRVY---GDAEL 199
>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
Length = 1263
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 113/263 (42%), Gaps = 1/263 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N TY L+ K +A + M + S ++ LM + K E + ++
Sbjct: 284 NAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLL 343
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+EM+A + P+ Y+Y + +R L A R++ +M+ +G D T + L + +
Sbjct: 344 REMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEG-CKPDVITHTVLIQVLCD 402
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
AG A+ +++ + D Y L+ +G G+ V IW +++ N ++
Sbjct: 403 AGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVA 462
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I L + + A + F E + + N +I + K R +A EL +
Sbjct: 463 YTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMD 522
Query: 362 RRGADPNAKTWEIFSDYYLRNGD 384
G PN T +F +YY ++G+
Sbjct: 523 IHGPKPNGYTHVLFINYYGKSGE 545
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 113/304 (37%), Gaps = 7/304 (2%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y SL+ E + + AE L +MKEL G +N L+ K+ E++ + +EM
Sbjct: 883 YNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMH 942
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
TYN + L + A + + G + T+ L ++AG
Sbjct: 943 RKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQG-FSPTPCTYGPLLDGLLKAGRI 1001
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
E AE E+ + + Y L+ + GN +V +++ + N SY +
Sbjct: 1002 EDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTII 1061
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
I L L F++ D+ N++I K RLE A L +++G
Sbjct: 1062 IDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGI 1121
Query: 366 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKD 425
PN T+ + + G A E+ + G W P+ T +R +
Sbjct: 1122 VPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKG------WKPNVFTYNALIRGYSVSGS 1175
Query: 426 VDGA 429
D A
Sbjct: 1176 TDSA 1179
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 114/280 (40%), Gaps = 3/280 (1%)
Query: 106 IDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNS 163
ID AE F ++ E + TY LL+ K + E+ + E+M + + +N+
Sbjct: 896 IDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNT 955
Query: 164 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
+++ K+ E+ + + + P TY + L I AE + EM G
Sbjct: 956 IISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYG 1015
Query: 224 RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 283
A+ T ++ L + + AG EK +++ ++ + D+ +Y +I + G L++
Sbjct: 1016 -CKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDG 1074
Query: 284 YRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGA 343
+R L I+Y +I L K L A F E + ++ N +I
Sbjct: 1075 LTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILH 1134
Query: 344 YAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
K G+ A ++ E +G PN T+ Y +G
Sbjct: 1135 LGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSG 1174
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 92/218 (42%), Gaps = 3/218 (1%)
Query: 75 LKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLNC 132
LK+ E M ++G T + + K + ++ A + + +L S TYG LL+
Sbjct: 935 LKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDG 994
Query: 133 YCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPD 192
K E AE L +M E + +N L+ + G+ EK+ + Q+M I PD
Sbjct: 995 LLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPD 1054
Query: 193 SYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERAL 252
+Y + + L ++ ++ G + D T++ L ++ E+A
Sbjct: 1055 IKSYTIIIDTLCKAGQLNDGLTYFRQLLEMG-LEPDLITYNLLIDGLGKSKRLEEAVSLF 1113
Query: 253 KELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
E++ + +L Y LI G+ G +E +++ L
Sbjct: 1114 NEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEEL 1151
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 132/339 (38%), Gaps = 50/339 (14%)
Query: 62 LKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS- 120
L K D +++ M+ G N V +D + +V + A F ++ +
Sbjct: 432 LDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGI 491
Query: 121 -KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNL------GFSSMPFNSLMTLYAKTGH 173
+Y SL++ + K ++ LE K +++ G++ + F + Y K+G
Sbjct: 492 VPEQYSYNSLISGFLK---ADRFGDALELFKHMDIHGPKPNGYTHVLF---INYYGKSGE 545
Query: 174 PEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFS 233
K + MK+ I+PD N + LA + A+RV E+K G V+ D T++
Sbjct: 546 SIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMG-VSPDTITYT 604
Query: 234 NLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 293
+ +A F++A + ++ N D+ A LI + G E +RI+ L+
Sbjct: 605 MMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKE- 663
Query: 294 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
+NL+ G TY N ++ +EG+++
Sbjct: 664 ----------------MNLEPTDG-------------TY-----NTLLAGLGREGKVKEV 689
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 392
L E PN T+ D +NG + A+D L
Sbjct: 690 MHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDML 728
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 120/288 (41%), Gaps = 11/288 (3%)
Query: 72 YPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGID----AAENY-FVDLPETSKNHLTY 126
+ AL++ + M+++G+ V +Q + L++ D A E + +D+ N T+
Sbjct: 477 FEALEMFDEMKQKGI---VPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTH 533
Query: 127 GSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKA 186
+N Y K + KA E MK + + N+++ AK+G + E+KA
Sbjct: 534 VLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKA 593
Query: 187 SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE 246
+ PD+ TY + ++ + + A ++ +M + V D ++L +AG +
Sbjct: 594 MGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCV-PDVLAVNSLIDTLYKAGRGD 652
Query: 247 KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI 306
+A R +L+ N Y L+ G+ G + EV + + + I+Y ++
Sbjct: 653 EAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTIL 712
Query: 307 QVLVNLKDLPGA-EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
L + A + + GC D+ N +I KE R A
Sbjct: 713 DCLCKNGAVNDALDMLYSMTTKGCIP-DLSSYNTVIYGLVKEERYNEA 759
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 95/233 (40%), Gaps = 4/233 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A++ E M+ +G+ V L +AK + A+ F +L S + +TY ++
Sbjct: 549 AIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIK 608
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C K ++A + M E N + NSL+ K G ++ I ++K ++ P
Sbjct: 609 CCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEP 668
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
TYN + L + ++EEM + T++ + + G A
Sbjct: 669 TDGTYNTLLAGLGREGKVKEVMHLLEEMYHS-NYPPNLITYNTILDCLCKNGAVNDALDM 727
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL-RLAFPNTANISYL 303
L + + DLS+Y +I + +E + I+ + ++ P+ A + +
Sbjct: 728 LYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTI 780
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 2/138 (1%)
Query: 77 LSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYC 134
L ++M +G+N + I +D + K ++ YF L E + +TY L++
Sbjct: 1042 LFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLG 1101
Query: 135 KELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSY 194
K E+A +L +M++ + + +NSL+ K G + + +E+ P+ +
Sbjct: 1102 KSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVF 1161
Query: 195 TYNVWMRALAAVNDISGA 212
TYN +R + A
Sbjct: 1162 TYNALIRGYSVSGSTDSA 1179
Score = 42.0 bits (97), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 48/254 (18%), Positives = 101/254 (39%), Gaps = 3/254 (1%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY +LL +E ++ LLE+M N + + +N+++ K G ++ M
Sbjct: 672 TYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSM 731
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+PD +YN + L + A + +MK+ + D+ T + +V+ GL
Sbjct: 732 TTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKK--VLIPDYATLCTILPSFVKIGL 789
Query: 245 FEKAERALKE-LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
++A +K+ + D S+ L+ + + + + + +
Sbjct: 790 MKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLC 849
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I+ L K A + K+++S + + N +I E ++ AE L +
Sbjct: 850 PLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKEL 909
Query: 364 GADPNAKTWEIFSD 377
G P+ T+ + D
Sbjct: 910 GCGPDEFTYNLLLD 923
>gi|356533316|ref|XP_003535211.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 918
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/389 (19%), Positives = 156/389 (40%), Gaps = 44/389 (11%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL M++ G+ T+ +I + AK+ DAA+++F + E S N +TYGS++
Sbjct: 328 ALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGKADAADHWFKEAKEKLPSLNAVTYGSIIY 387
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C+ ++AEAL+ +M+ + ++++M Y G+ EK + +K P
Sbjct: 388 AHCQTCNMDRAEALVREMEVQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFSP 447
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+Y + + +S A ++ + MK G + + T+S L + +++ + A
Sbjct: 448 SVISYGCLINLYTKIGKVSKALQISKMMKMSG-IKHNMKTYSMLINGFLKLKDWANAFSV 506
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
++ D+ Y +IT + N+ + + ++ ++L +I
Sbjct: 507 FEDFTKDGLKPDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIH---- 562
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+A+ G + A E+ + RR G P T
Sbjct: 563 -------------------------------GFARAGEMRRALEIFDMMRRSGCIPTVHT 591
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG 431
+ + M AV L++ G G P+ T T M+ + D + A
Sbjct: 592 YNALILGLVEKRKMAKAVAILDQMNVAGVG------PNEHTYTTLMQGYASLGDTEKAFQ 645
Query: 432 FLEILKKAVDDLGVEVFEPLIRTYAAAGR 460
+ +L+ ++ V +E L+++ +GR
Sbjct: 646 YFSVLRNEGLEIDVYTYEALLKSCCKSGR 674
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 77/148 (52%), Gaps = 1/148 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY +LL CK + A A+ ++M N+ ++ +N L+ +A+ G + ++Q+M
Sbjct: 661 TYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQM 720
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ ++PD +TY ++ A D+ A +I+EM+ G + + T++ L + + A +
Sbjct: 721 RKEGVLPDIHTYTSFVNACCKAGDMQKATEIIQEMEAFG-IKPNLKTYTTLINGWARASM 779
Query: 245 FEKAERALKELENRNAHRDLSAYQFLIT 272
EKA +E++ D +AY L+T
Sbjct: 780 PEKALSCFEEMKLAELKPDKAAYHCLMT 807
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 102/222 (45%), Gaps = 3/222 (1%)
Query: 74 ALKLSENMEKRGMNKTVSD-QAIHLDLVAKVQGIDAAENY-FVDLPETSKNHLTYGSLLN 131
AL++ + M + G TV A+ L LV K + A +++ N TY +L+
Sbjct: 573 ALEIFDMMRRSGCIPTVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTLMQ 632
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
Y TEKA ++ L + +L+ K+G + A+ +EM A +I
Sbjct: 633 GYASLGDTEKAFQYFSVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPR 692
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+++ YN+ + A D+ A ++++M+++G V D T+++ + +AG +KA
Sbjct: 693 NTFVYNILIDGWARRGDVWEAADLMQQMRKEG-VLPDIHTYTSFVNACCKAGDMQKATEI 751
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 293
++E+E +L Y LI + + + + ++LA
Sbjct: 752 IQEMEAFGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLA 793
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/302 (20%), Positives = 118/302 (39%), Gaps = 13/302 (4%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
+ ++ YA+ G + M+A I P S+ Y+ + A A D+ A + +MK
Sbjct: 277 YGLMVKYYARRGDMHHARQTFESMQARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMK 336
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
+G + T+S + + + G + A+ KE + + + Y +I + QT N+
Sbjct: 337 EEG-IEMTIVTYSIIVGGFAKMGKADAADHWFKEAKEKLPSLNAVTYGSIIYAHCQTCNM 395
Query: 281 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC---FKEWESGCATYDIRVT 337
+ R + + + Y M+ + + EKC F + + +
Sbjct: 396 DRAEALVREMEVQGIDAPIDIYHTMMDGYTMIGN---EEKCLIVFDRLKECGFSPSVISY 452
Query: 338 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
+I Y K G++ A ++ + + G N KT+ + + +L+ D A E
Sbjct: 453 GCLINLYTKIGKVSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTK 512
Query: 398 TGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAA 457
DG K P + F ++D A ++ ++K F P+I +A
Sbjct: 513 ----DGLK--PDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGFAR 566
Query: 458 AG 459
AG
Sbjct: 567 AG 568
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY S +N CK +KA ++++M+ + + + +L+ +A+ PEK + +EM
Sbjct: 731 TYTSFVNACCKAGDMQKATEIIQEMEAFGIKPNLKTYTTLINGWARASMPEKALSCFEEM 790
Query: 185 KASSIMPDSYTYNVWMRAL 203
K + + PD Y+ M +L
Sbjct: 791 KLAELKPDKAAYHCLMTSL 809
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 113/264 (42%), Gaps = 10/264 (3%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TYG L+N CK E+AE L M +S+ + SL+ +AK+G ++ ++ E
Sbjct: 296 VTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDE 355
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + PD T+ V + L + A + EEM R G + T++ + + G
Sbjct: 356 MVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGG-CKPNVVTYTTIIQGLSKIG 414
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
A R +K + D Y L+ + + G L E ++ L ++ L
Sbjct: 415 RVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDEL----DKCSSSPNL 470
Query: 304 NMIQVLVN-LKDLPGAEKC----FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+ LVN L D EK F++ ++ T D + +I K GRL+ A + +
Sbjct: 471 QLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQ 530
Query: 359 RARRRGADPNAKTWEIFSDYYLRN 382
R G P+A T+ I + R+
Sbjct: 531 RMVSEGCKPDATTYNILINGLCRS 554
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 115/274 (41%), Gaps = 8/274 (2%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKT----GHPEKIPAI 180
T+ L++C CK M EKA + +M + +GF P +L T +T ++ +
Sbjct: 191 TFLILVDCLCKAGMDEKAFEVFHEM--MAMGFVP-PDRALHTAMVRTLLKAKRVKEAREV 247
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
+M+ PD+ YN + LA A +V++ M V + T+ L +
Sbjct: 248 FGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTE-VTYGILVNSLC 306
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
+AG E+AE + + + Y LI + ++G + E ++ + A I
Sbjct: 307 KAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVI 366
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
++ MI L + A K F+E G ++ +I +K GR+ NA + +
Sbjct: 367 THTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGM 426
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
G P++ T+ D + + G + A L++
Sbjct: 427 IAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDE 460
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 110/276 (39%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
TY L+N E + A+ E+M + + ++ FN L+ +A+T + +
Sbjct: 120 FTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEI 179
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
MK PD +T+ + + L A V EM G V D + + ++A
Sbjct: 180 MKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAK 239
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
++A ++E D AY +I + G+ E ++ ++ ++Y
Sbjct: 240 RVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYG 299
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
++ L L AE+ F+ + + + +I +AK GR++ A L +
Sbjct: 300 ILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEA 359
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
G P+ T + D ++G+ + A E+ + G
Sbjct: 360 GYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGG 395
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 141/334 (42%), Gaps = 12/334 (3%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
ALK+ +NM + T I ++ + K ++ AE F + + N + Y SL++
Sbjct: 279 ALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIH 338
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ K ++A +L ++M E + ++ K+G+ E+ +EM P
Sbjct: 339 GFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKP 398
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ TY ++ L+ + ++ A R+++ M G D T+ L + + G ++A +
Sbjct: 399 NVVTYTTIIQGLSKIGRVANAFRIMKGMIAHG-CFPDSVTYICLLDGFCKLGRLDEAAQL 457
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQV-LV 310
L EL+ ++ +L Y L+ G++ + A T + I V L
Sbjct: 458 LDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLC 517
Query: 311 NLKDLPGAEKCFKEWES-GC----ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
L A + F+ S GC TY+I + + ++E R+E A L + G
Sbjct: 518 KTGRLDEACRIFQRMVSEGCKPDATTYNILINGL---CRSRENRVERAFALLHDLEKVGY 574
Query: 366 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
P+A T+ + G++ AV LE+A G
Sbjct: 575 LPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRG 608
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 144/369 (39%), Gaps = 46/369 (12%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
A ++ + M G LD K+ +D A +D +S N Y SL+N
Sbjct: 419 AFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVN 478
Query: 132 CYCKELMTEKA-EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
C EK + L E+ K S++ KTG ++ I Q M +
Sbjct: 479 GLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCK 538
Query: 191 PDSYTYNVWMRALAAV--NDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
PD+ TYN+ + L N + A ++ ++++ G + D T++ L + G ++A
Sbjct: 539 PDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLP-DAVTYTPLCIGLCKIGEVDRA 597
Query: 249 ERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMI 306
+ L+E +R + D+ AY L T G + +++ + + P+ A +Y +I
Sbjct: 598 VKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAA--AYCCII 655
Query: 307 QVLVNLKDLPGAEKCFKEW-----ESGCATY----------------------------- 332
L+ +K L A K F E + ATY
Sbjct: 656 NGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGEL 715
Query: 333 --DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
+ + + +I + K +++ A +L E RG P A T D +R+G + A +
Sbjct: 716 VGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQE 775
Query: 391 CLEKAIDTG 399
L++ G
Sbjct: 776 LLQEMAAGG 784
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/254 (17%), Positives = 109/254 (42%), Gaps = 5/254 (1%)
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
++A + +M++ ++ +N+++ AK GH ++ ++ M A + +P TY +
Sbjct: 241 VKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGI 300
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
+ +L + AE + M G + +++L + ++G ++A E+
Sbjct: 301 LVNSLCKAGTLERAEELFRVMAASG-FRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEA 359
Query: 259 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 318
D+ + +I ++GN + + + + ++Y +IQ L + + A
Sbjct: 360 GYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANA 419
Query: 319 EKCFKEW-ESGCATYDIRVTNV-MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 376
+ K GC + VT + ++ + K GRL+ A +L + + + PN + +
Sbjct: 420 FRIMKGMIAHGC--FPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLV 477
Query: 377 DYYLRNGDMKLAVD 390
+ G ++ +D
Sbjct: 478 NGLCDGGSVEKTLD 491
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 103/264 (39%), Gaps = 7/264 (2%)
Query: 125 TYGSLLNCYCK--ELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQ 182
TY L+N C+ E E+A ALL ++++ ++ + L K G ++ +++
Sbjct: 543 TYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLE 602
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
E + D Y L + A + +EM R G A D + + + ++
Sbjct: 603 EASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGG-APDAAAYCCIINGLIKV 661
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANI 300
E A + E+ + ++ Y L+ GN+ E + + S+ R + I
Sbjct: 662 KKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMI 721
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
Y +I + A K F++ S + + + G+ E A+EL +
Sbjct: 722 -YDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEM 780
Query: 361 RRRGADPNAKTWEIFSDYYLRNGD 384
G+ P+A T+ D LR D
Sbjct: 781 AAGGSPPHAATFTAILD-GLRKSD 803
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 80/198 (40%), Gaps = 2/198 (1%)
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D +TYN M L A + S + EEM + G +A + +F+ L + + A
Sbjct: 118 DVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAG-IAPNTFSFNILIRSFARTRRADDAVTC 176
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR-LAFPNTANISYLNMIQVLV 310
+ ++ + DL + L+ + G + + ++ + + F + M++ L+
Sbjct: 177 FEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLL 236
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
K + A + F + E D N MI AK G + A ++ + + P
Sbjct: 237 KAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEV 296
Query: 371 TWEIFSDYYLRNGDMKLA 388
T+ I + + G ++ A
Sbjct: 297 TYGILVNSLCKAGTLERA 314
>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 105/519 (20%), Positives = 200/519 (38%), Gaps = 96/519 (18%)
Query: 7 FGRTKNIAKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLR 66
F +I R + L + K SS SV Q L + + ++K + ++ D L
Sbjct: 90 FNFVNHIDLRCLDFQTQCLAIAVVSKLSSPKSVTQLLKEVVSTRKNSVR-DLFDELVLAH 148
Query: 67 DRKL------------YYPALKLSEN-------MEKRGMNKTVSDQAIHLDLVAKVQGID 107
DR +Y L++ + M+++G + L L++++ I+
Sbjct: 149 DRLQTKSTILFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIE 208
Query: 108 AAENYFVDL--PETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLM 165
A ++ D+ E N T+ ++N CKE +KA+ L M+ + + + +N+L+
Sbjct: 209 NAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLV 268
Query: 166 TLYAKTGHPEKIPAIIQEMKAS--------------------------------SIMPDS 193
Y+ G E II EMK+ ++PDS
Sbjct: 269 QGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGRASEVLREMKGIGLVPDS 328
Query: 194 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 253
+YN+ +R + D+ A +EM + G V +T + + +++E + E AE ++
Sbjct: 329 VSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKI-EAAEILIR 387
Query: 254 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLK 313
E+ + D Y +I Y Q G+ + + + + +Y ++I VL
Sbjct: 388 EIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRN 447
Query: 314 DLPGAEKCFKE----------------WESGCATYDI------------------RVT-N 338
A++ F++ + CAT ++ VT N
Sbjct: 448 KTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYN 507
Query: 339 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 398
++ EG+ E A EL +RRG P+ ++ Y + GD K A ++ +
Sbjct: 508 CLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSL 567
Query: 399 GRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 437
G + P+ T ++ + +D + AE L +K
Sbjct: 568 G------FNPTLLTYNALLKGLSKNQDGELAEELLREMK 600
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 52/105 (49%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY L+ C E E+A L+ +MK + + +N+L++ Y+K G + + E
Sbjct: 504 VTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDE 563
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAAD 228
M + P TYN ++ L+ D AE ++ EMK +G V D
Sbjct: 564 MLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPND 608
>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 909
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 139/325 (42%), Gaps = 3/325 (0%)
Query: 62 LKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS- 120
+ +LR ++L A L+ + GM V +D + K + D A+ F ++
Sbjct: 333 IDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGL 392
Query: 121 -KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
N +TY L++ CK M E A L +KM++ + + P+NSL+ Y K G ++
Sbjct: 393 EPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARG 452
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
++ M + P + +Y+ + L D+S + EM G +A + TF+ L + +
Sbjct: 453 LLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERG-IAWNNYTFTALINGF 511
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
+ ++A R ++ + N + + +I Y GN+ + ++++ + N
Sbjct: 512 CKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDN 571
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+Y ++I L + A + + E+ A + ++ + +EGR L +
Sbjct: 572 YTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDE 631
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGD 384
RG + ++ I L+ D
Sbjct: 632 MAVRGVKLDLVSFTIIVYAALKQHD 656
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 120/269 (44%), Gaps = 1/269 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N+ T+ +L+N +CK+ ++A L +KM + N+ + + FN ++ Y G+ K +
Sbjct: 500 NNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLY 559
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+M + PD+YTY + L + +S A + +++ V +++ + L + E
Sbjct: 560 DQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFRE 619
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G F + E+ R DL ++ ++ + + + ++R ++ +I
Sbjct: 620 -GRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIF 678
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y MI L +++ A C+ + + + V+I K G L +AE L +
Sbjct: 679 YTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEML 738
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
PN T+ F DY+ GDM+ A D
Sbjct: 739 AGNVLPNKFTYNCFLDYFATEGDMEKAKD 767
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/340 (20%), Positives = 131/340 (38%), Gaps = 17/340 (5%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
Y + + YC+ + A L+ +M+ + S++P+N LM K ++ + M
Sbjct: 223 VYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVM 282
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ D TY + + ++ A R+ +M R G V ++ S + + L
Sbjct: 283 VNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSE-ANCSFMIDELRKKEL 341
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISY 302
E+A +L + ++ AY LI + + R+++ + R PN ++Y
Sbjct: 342 VEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPN--EVTY 399
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+I L + A F + + N +I Y K+G L+ A L +
Sbjct: 400 AILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVK 459
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ 422
G P A ++ RNGD+ C+E + G W ++ T + F +
Sbjct: 460 EGLTPTAASYSPLIAGLCRNGDLS---SCMELHREMAE-RGIAW--NNYTFTALINGFCK 513
Query: 423 EKDVDGAEGFLEILKKAVDDLGVE---VFEPLIRTYAAAG 459
+K +D A + K +D + F +I Y G
Sbjct: 514 DKKMDEAA---RLFDKMIDSNVIPNEVTFNVMIEGYCLVG 550
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 12/173 (6%)
Query: 103 VQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFN 162
+Q ++ + VD S N +T+ L+N CK AE L ++M N+ + +N
Sbjct: 693 IQALNCWDQMVVD--GYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYN 750
Query: 163 SLMTLYAKTGHPEKI----PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 218
+ +A G EK A++Q AS + ++N+ ++ L I A ++ +
Sbjct: 751 CFLDYFATEGDMEKAKDLHSAMLQGHLASIV-----SFNILIKGLCKAGKIQEAIDLMSK 805
Query: 219 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 271
+ G + D ++S + + G KA E+ + D+ AY I
Sbjct: 806 ITESG-FSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFI 857
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 104/469 (22%), Positives = 183/469 (39%), Gaps = 35/469 (7%)
Query: 2 AMPQRFGRTKNIAKRSKKH---LEEALYDRLFKKGSSDVSVR-QQLNQFLKSKKRVFKWE 57
A P F T I + H L A++DR+ K G SV L L S+ R+ +
Sbjct: 233 AYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEE-- 290
Query: 58 VGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP 117
A+ + E M ++G+ TV I L + A +
Sbjct: 291 ----------------AMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMK 334
Query: 118 E--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
+ N T+ +L++ ++ E A L KM L +++ +N+L+ G E
Sbjct: 335 KRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFE 394
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
I + M + +P + TYN ++ + DI A + ++M + G + + T++ L
Sbjct: 395 TAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGS-SPNVITYNTL 453
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
Y + G A R L+ ++ D Y LI+ + + G L ++ +
Sbjct: 454 IYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGI 513
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCF-KEWESGCATYDIRVTNVMIGAYAKEGRLENAE 354
+ +++Y +I NL + A F K ESG + NVMI ++K + AE
Sbjct: 514 SPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSS-QTYNVMISGFSKTNSISEAE 572
Query: 355 ELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIR 414
+ ++G PN T+ F D RNG LA + + + P+ T
Sbjct: 573 NFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEM------EKRNYFPNLYTYS 626
Query: 415 TFMRHFEQEKDVDGAEGF--LEILKKAVDDLGVEVFEPLIRTYAAAGRT 461
+ + QE + AE + L L + V+ + L++ GR
Sbjct: 627 SLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRC 675
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/362 (20%), Positives = 140/362 (38%), Gaps = 42/362 (11%)
Query: 77 LSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYC 134
LSE K T+ L + K +D A + ++ + + + LT+ +++N C
Sbjct: 154 LSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILC 213
Query: 135 KELMTEKAEALLEKM----------------------KELNLGFS-------------SM 159
K+ ++A+ ++ + L+L F+ S+
Sbjct: 214 KKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSV 273
Query: 160 PFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM 219
+++L+ G E+ +++EM I P YTY + + +L S A ++ +M
Sbjct: 274 TYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKM 333
Query: 220 KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGN 279
K+ G V + TF+ L S G FE A ++ Y LI G
Sbjct: 334 KKRGCV-PNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGR 392
Query: 280 LSEVYRI--WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVT 337
+ I W + P+T +Y +I+ + D+ A F + ++ ++
Sbjct: 393 FETAFTIFKWMLSHGSLPSTQ--TYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITY 450
Query: 338 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
N +I Y K+G L NA L E + G P+A T+ + R G ++ A ++
Sbjct: 451 NTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMME 510
Query: 398 TG 399
G
Sbjct: 511 HG 512
>gi|255661132|gb|ACU25735.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 426
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 121/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 6 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 65
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S PD YN + A +I EM+ G V + ++S L ++Y
Sbjct: 66 IFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAG-VTPNTASYSTLLTMY 124
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ +R
Sbjct: 125 VENRKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 245 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 284
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 108/221 (48%), Gaps = 20/221 (9%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML 276
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S + D Y + A ++ A+R++ E+KR + D I
Sbjct: 277 FQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAI-----HILA 331
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + +D+ ++ +I L Y + GN+ EV+ R L FP++
Sbjct: 332 GAGRIEEATWVFRQAIDAGEVKDIXVFERMIHLFSKYKKYGNVVEVFDKMRGLGY-FPDS 390
Query: 298 ANISYLNMIQVLVN----LKDLPGAEKCFKEW-ESGCATYD 333
N+I +++N L + A + E E GC D
Sbjct: 391 ------NVIALILNAYGKLHEFDKANDVYMEMQEVGCVFSD 425
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 8/202 (3%)
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
++ PD YTY+ + A +++M++D RV D +SNL + + + K
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNM 305
A L+ DL AY +I ++G+ E + +R A PNTA SY +
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTA--SYSTL 120
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
+ + V + A F E D+ N+MI Y + G + A++L R+ G
Sbjct: 121 LTMYVENRKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180
Query: 366 DPNAKTWEIFSDYYLRNGDMKL 387
+PN ++ Y GD +L
Sbjct: 181 EPNVVSYNTLLRVY---GDAEL 199
>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1080
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 101/224 (45%), Gaps = 1/224 (0%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
++ LM + K E + +++EM+A + P+ Y+Y + +R L A R++ +M+
Sbjct: 198 YSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKME 257
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
+G D T + L + +AG A+ +++ + D Y L+ +G G+
Sbjct: 258 NEG-CKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDS 316
Query: 281 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 340
V IW +++ N ++Y +I L + + A + F E + + N +
Sbjct: 317 QSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSL 376
Query: 341 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 384
I + K R +A EL + G PN T +F +YY ++G+
Sbjct: 377 ISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGE 420
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 113/304 (37%), Gaps = 7/304 (2%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y SL+ E + + AE L +MKEL G +N L+ K+ E++ + +EM
Sbjct: 758 YNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMH 817
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
TYN + L + A + + G + T+ L ++AG
Sbjct: 818 RKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQG-FSPTPCTYGPLLDGLLKAGRI 876
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
E AE E+ + + Y L+ + GN +V +++ + N SY +
Sbjct: 877 EDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTII 936
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
I L L F++ D+ N++I K RLE A L +++G
Sbjct: 937 IDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGI 996
Query: 366 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKD 425
PN T+ + + G A E+ + G W P+ T +R +
Sbjct: 997 VPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKG------WKPNVFTYNALIRGYSVSGS 1050
Query: 426 VDGA 429
D A
Sbjct: 1051 TDSA 1054
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 123/309 (39%), Gaps = 9/309 (2%)
Query: 106 IDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNS 163
ID AE F ++ E + TY LL+ K + E+ + E+M + + +N+
Sbjct: 771 IDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNT 830
Query: 164 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
+++ K+ E+ + + + P TY + L I AE + EM G
Sbjct: 831 IISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYG 890
Query: 224 RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 283
A+ T ++ L + + AG EK +++ ++ + D+ +Y +I + G L++
Sbjct: 891 -CKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDG 949
Query: 284 YRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGA 343
+R L I+Y +I L K L A F E + ++ N +I
Sbjct: 950 LTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILH 1009
Query: 344 YAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDG 403
K G+ A ++ E +G PN T+ Y +G A GR
Sbjct: 1010 LGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAY------GRMIV 1063
Query: 404 GKWVPSSET 412
G +P+S T
Sbjct: 1064 GGCLPNSST 1072
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 113/300 (37%), Gaps = 38/300 (12%)
Query: 75 LKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLNC 132
LK+ E M ++G T + + K + ++ A + + +L S TYG LL+
Sbjct: 810 LKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDG 869
Query: 133 YCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPD 192
K E AE L +M E + +N L+ + G+ EK+ + Q+M I PD
Sbjct: 870 LLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPD 929
Query: 193 SYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERAL 252
+Y + + L ++ ++ G + D T++ L ++ E+A
Sbjct: 930 IKSYTIIIDTLCKAGQLNDGLTYFRQLLEMG-LEPDLITYNLLIDGLGKSKRLEEAVSLF 988
Query: 253 KELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNL 312
E++ + +L Y LI G+ G +E +++ L
Sbjct: 989 NEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLT-------------------- 1028
Query: 313 KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
K W+ TY N +I Y+ G ++A R G PN+ T+
Sbjct: 1029 ----------KGWKPNVFTY-----NALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTY 1073
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 126/320 (39%), Gaps = 50/320 (15%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELM 138
M+ G N V +D + +V + A F ++ + +Y SL++ + K
Sbjct: 326 MKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLK--- 382
Query: 139 TEKAEALLEKMKELNL------GFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPD 192
++ LE K +++ G++ + F + Y K+G K + MK+ I+PD
Sbjct: 383 ADRFGDALELFKHMDIHGPKPNGYTHVLF---INYYGKSGESIKAIQRYELMKSKGIVPD 439
Query: 193 SYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERAL 252
N + LA + A+RV E+K G V+ D T++ + +A F++A +
Sbjct: 440 VVAGNAVLFGLAKSGRLGMAKRVFHELKAMG-VSPDTITYTMMIKCCSKASKFDEAVKIF 498
Query: 253 KELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNL 312
++ N D+ A LI + G E +RI+ L+ +NL
Sbjct: 499 YDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKE-----------------MNL 541
Query: 313 KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
+ G TY N ++ +EG+++ L E PN T+
Sbjct: 542 EPTDG-------------TY-----NTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITY 583
Query: 373 EIFSDYYLRNGDMKLAVDCL 392
D +NG + A+D L
Sbjct: 584 NTILDCLCKNGAVNDALDML 603
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 120/288 (41%), Gaps = 11/288 (3%)
Query: 72 YPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGID----AAENY-FVDLPETSKNHLTY 126
+ AL++ + M+++G+ V +Q + L++ D A E + +D+ N T+
Sbjct: 352 FEALEMFDEMKQKGI---VPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTH 408
Query: 127 GSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKA 186
+N Y K + KA E MK + + N+++ AK+G + E+KA
Sbjct: 409 VLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKA 468
Query: 187 SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE 246
+ PD+ TY + ++ + + A ++ +M + V D ++L +AG +
Sbjct: 469 MGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCV-PDVLAVNSLIDTLYKAGRGD 527
Query: 247 KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI 306
+A R +L+ N Y L+ G+ G + EV + + + I+Y ++
Sbjct: 528 EAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTIL 587
Query: 307 QVLVNLKDLPGA-EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
L + A + + GC D+ N +I KE R A
Sbjct: 588 DCLCKNGAVNDALDMLYSMTTKGCIP-DLSSYNTVIYGLVKEERYNEA 634
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 96/232 (41%), Gaps = 6/232 (2%)
Query: 74 ALKLSENMEKRGM-NKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLL 130
A++ E M+ +G+ V+ A+ L AK + A+ F +L S + +TY ++
Sbjct: 424 AIQRYELMKSKGIVPDVVAGNAVLFGL-AKSGRLGMAKRVFHELKAMGVSPDTITYTMMI 482
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
C K ++A + M E N + NSL+ K G ++ I ++K ++
Sbjct: 483 KCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLE 542
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
P TYN + L + ++EEM + T++ + + G A
Sbjct: 543 PTDGTYNTLLAGLGREGKVKEVMHLLEEMYHS-NYPPNLITYNTILDCLCKNGAVNDALD 601
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL-RLAFPNTANIS 301
L + + DLS+Y +I + +E + I+ + ++ P+ A +
Sbjct: 602 MLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPDYATLC 653
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 48/254 (18%), Positives = 101/254 (39%), Gaps = 3/254 (1%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY +LL +E ++ LLE+M N + + +N+++ K G ++ M
Sbjct: 547 TYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSM 606
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+PD +YN + L + A + +MK+ + D+ T + +V+ GL
Sbjct: 607 TTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKK--VLIPDYATLCTILPSFVKIGL 664
Query: 245 FEKAERALKE-LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
++A +K+ + D S+ L+ + + + + + +
Sbjct: 665 MKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLC 724
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I+ L K A + K+++S + + N +I E ++ AE L +
Sbjct: 725 PLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKEL 784
Query: 364 GADPNAKTWEIFSD 377
G P+ T+ + D
Sbjct: 785 GCGPDEFTYNLLLD 798
>gi|410110093|gb|AFV61126.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
microcephala]
Length = 440
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 121/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 12 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 71
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S PD YN + A +I EMK G V + ++S L ++Y
Sbjct: 72 IFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAG-VMPNTASYSTLLTMY 130
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ +R
Sbjct: 131 VENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 190
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 191 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 250
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 251 MQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 290
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 91/211 (43%), Gaps = 8/211 (3%)
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+ EM+ ++ PD YTY+ + A +++M++D RV D +SNL +
Sbjct: 1 GLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIEL 59
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPN 296
+ + KA L+ DL AY +I ++G+ E + ++ A PN
Sbjct: 60 SRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPN 119
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
TA SY ++ + V K A F E D+ N+MI Y + G + A++L
Sbjct: 120 TA--SYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 177
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDMKL 387
R+ G +PN ++ Y GD +L
Sbjct: 178 FWGMRKMGIEPNVVSYNTLLRVY---GDAEL 205
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 111/221 (50%), Gaps = 20/221 (9%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 223 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAML 282
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S I D + + A ++ A+R++ E+KR + D T LA
Sbjct: 283 FQKLRSSGIEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD-TAIHILAG--- 338
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + +D++ ++ +I L Y + N+ EV+ R L FP++
Sbjct: 339 -AGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGY-FPDS 396
Query: 298 ANISYLNMIQVLVN----LKDLPGAEKCFKEW-ESGCATYD 333
++I +++N L++ A + E E GC D
Sbjct: 397 ------DVIAIVLNAYGKLQEFDKANDVYMEMQEVGCVFSD 431
>gi|255661164|gb|ACU25751.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 426
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 121/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 6 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 65
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S PD YN + A +I EM+ G V + ++S L ++Y
Sbjct: 66 IFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAG-VTPNTASYSTLLTMY 124
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ +R
Sbjct: 125 VENKKFLEALSXFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 245 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 284
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 109/221 (49%), Gaps = 20/221 (9%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML 276
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S + D Y + A ++ A+R++ E+KR + D I
Sbjct: 277 FQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAI-----HILA 331
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + +D++ ++ +I L Y + GN+ EV+ R L FP++
Sbjct: 332 GAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGY-FPDS 390
Query: 298 ANISYLNMIQVLVN----LKDLPGAEKCFKEW-ESGCATYD 333
N+I +++N L + A + E E GC D
Sbjct: 391 ------NVIALVLNAYGKLHEFDKANDVYMEMQEVGCVFSD 425
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 8/202 (3%)
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
++ PD YTY+ + A +++M++D RV D +SNL + + + K
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNM 305
A L+ DL AY +I ++G+ E + +R A PNTA SY +
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTA--SYSTL 120
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
+ + V K A F E D+ N+MI Y + G + A++L R+ G
Sbjct: 121 LTMYVENKKFLEALSXFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180
Query: 366 DPNAKTWEIFSDYYLRNGDMKL 387
+PN ++ Y GD +L
Sbjct: 181 EPNVVSYNTLLRVY---GDAEL 199
>gi|255661148|gb|ACU25743.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 425
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 121/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 6 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 65
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S PD YN + A +I EM+ G V + ++S L ++Y
Sbjct: 66 IFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAG-VTPNTASYSTLLTMY 124
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ +R
Sbjct: 125 VENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 245 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 284
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 109/221 (49%), Gaps = 20/221 (9%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML 276
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S + D Y + A ++ A+R++ E+KR + D I
Sbjct: 277 FQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAI-----HILA 331
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + +D++ ++ +I L Y + GN+ EV+ R L FP++
Sbjct: 332 GAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGY-FPDS 390
Query: 298 ANISYLNMIQVLVN----LKDLPGAEKCFKEW-ESGCATYD 333
N+I +++N L + A + E E GC D
Sbjct: 391 ------NVIALVLNAYGKLHEFDKANDVYMEMQEVGCVFSD 425
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 8/202 (3%)
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
++ PD YTY+ + A +++M++D RV D +SNL + + + K
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNM 305
A L+ DL AY +I ++G+ E + +R A PNTA SY +
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTA--SYSTL 120
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
+ + V K A F E D+ N+MI Y + G + A++L R+ G
Sbjct: 121 LTMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180
Query: 366 DPNAKTWEIFSDYYLRNGDMKL 387
+PN ++ Y GD +L
Sbjct: 181 EPNVVSYNTLLRVY---GDAEL 199
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 159/388 (40%), Gaps = 52/388 (13%)
Query: 60 DTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET 119
D+L K D + A +L +M RG V ++ ++ + KV ID A ++
Sbjct: 80 DSLCKAGDLE---EARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRK 136
Query: 120 S----KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFS--SMPFNSLMTLYAKTGH 173
S N +TY S L+ CK+ MT +A L+ +++ +L S ++ F++L+ K G
Sbjct: 137 SCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQ 196
Query: 174 PEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG---------- 223
++ ++ +M A +P+ TYN + L + + A +IE M G
Sbjct: 197 IDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSV 256
Query: 224 ---------RV--------------------AADWTTFSNLASIYVEAGLFEKAERALKE 254
RV D TF+ L + +AG FE+A +E
Sbjct: 257 LVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEE 316
Query: 255 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL-RLAFPNTANISYLNMIQVLVNLK 313
+ +N D+ + LI + G + I + L P ++Y ++ L
Sbjct: 317 MVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNV-VTYNALVHGLCKSG 375
Query: 314 DLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
+ A + +E SGC I + ++ A + R ++A +L + G DP+ T+
Sbjct: 376 RIEEACQFLEEMVSSGCVPDSITYGS-LVYALCRASRTDDALQLVSELKSFGWDPDTVTY 434
Query: 373 EIFSDYYLRNGDMKLAVDCLEKAIDTGR 400
I D ++G + A+ LE+ + G
Sbjct: 435 NILVDGLWKSGKTEQAITVLEEMVGKGH 462
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/355 (21%), Positives = 142/355 (40%), Gaps = 33/355 (9%)
Query: 44 NQFLKS-KKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAK 102
N FL K+ E + ++ LRD L R TV+ + +D + K
Sbjct: 148 NSFLDGLCKQSMTAEACELMRSLRDGSL-------------RVSPDTVTFSTL-IDGLCK 193
Query: 103 VQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMP 160
ID A + F D+ N +TY +L+N CK E+A A++E M + + +
Sbjct: 194 CGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVIT 253
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKA-----SSIMPDSYTYNVWMRALAAVNDISGAERV 215
++ L+ + K ++ ++ M + + ++PD T+N+ + + A +
Sbjct: 254 YSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASAL 313
Query: 216 IEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYG 275
EEM + D TF L +AG E A L + N ++ Y L+
Sbjct: 314 FEEMVAK-NLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLC 372
Query: 276 QTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE-----WESGCA 330
++G + E + + + +I+Y +++ L A + E W+
Sbjct: 373 KSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTV 432
Query: 331 TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 385
TY N+++ K G+ E A + E +G P++ T+ R+G++
Sbjct: 433 TY-----NILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNL 482
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 104/224 (46%), Gaps = 12/224 (5%)
Query: 74 ALKLSENMEKRGM--NKTVSDQAIHLDLVA---KVQGIDAAENYFVDLPETSKNH----L 124
AL+L M RG N V D+ L+A K + A F ++ +KN +
Sbjct: 270 ALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEM--VAKNLQPDVM 327
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
T+G+L++ CK E A +L+ M L + + + +N+L+ K+G E+ ++EM
Sbjct: 328 TFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEM 387
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+S +PDS TY + AL + A +++ E+K G D T++ L ++G
Sbjct: 388 VSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGW-DPDTVTYNILVDGLWKSGK 446
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWR 288
E+A L+E+ + D + + ++GNL+ + R
Sbjct: 447 TEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLR 490
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 103/250 (41%), Gaps = 7/250 (2%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +++N CK L E++ E + +N+L+ K G E+ + +
Sbjct: 38 VTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGD 97
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR-DGRVAADWTTFSNLASIYVEA 242
M + +P+ TY+V + L V I A +I+EM R V + T+++ +
Sbjct: 98 MSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQ 157
Query: 243 GLFEKAERALKELENRN--AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTA 298
+ +A ++ L + + D + LI + G + E ++ + PN
Sbjct: 158 SMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNV- 216
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
I+Y ++ L + A + T D+ +V++ A+ K R++ A EL
Sbjct: 217 -ITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLH 275
Query: 359 RARRRGADPN 368
RG PN
Sbjct: 276 GMASRGCTPN 285
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/263 (18%), Positives = 94/263 (35%), Gaps = 45/263 (17%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQ-EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM 219
+N ++ + G + I + EM + P TYN + L ND+ + EE+
Sbjct: 4 YNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEEL 63
Query: 220 KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGN 279
G D T++ L +AG E+A R ++ +R ++ Y LI + G
Sbjct: 64 VERGH-HPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGR 122
Query: 280 L-------------------------------------SEVYRIWRSLR----LAFPNTA 298
+ +E + RSLR P+T
Sbjct: 123 IDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDT- 181
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+++ +I L + A F + +G ++ N ++ K ++E A + E
Sbjct: 182 -VTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIE 240
Query: 359 RARRRGADPNAKTWEIFSDYYLR 381
+G P+ T+ + D + +
Sbjct: 241 SMVDKGVTPDVITYSVLVDAFCK 263
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 64/135 (47%), Gaps = 1/135 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ +TYGSL+ C+ T+ A L+ ++K ++ +N L+ K+G E+ ++
Sbjct: 395 DSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVL 454
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+EM PDS+T+ L +++G ++ + G + D TT S++
Sbjct: 455 EEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGML-PDATTCSSILDWVCR 513
Query: 242 AGLFEKAERALKELE 256
+G + + +KE E
Sbjct: 514 SGKLDDVKAMIKEFE 528
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 106/274 (38%), Gaps = 18/274 (6%)
Query: 196 YNVWMRALAAVNDISGAERVIE-EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE 254
YN+ +++L D + A + EM RDG VA T++ + + ++ +E
Sbjct: 4 YNIVLQSLCRAGDTARALEIFRGEMARDG-VAPTIVTYNTIINGLCKSNDLGAGMELFEE 62
Query: 255 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW--RSLRLAFPNTANISYLNMIQVLVNL 312
L R H D+ Y LI + G+L E R+ S R PN ++Y +I L +
Sbjct: 63 LVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNV--VTYSVLINGLCKV 120
Query: 313 KDLPGAEKCFKEW--ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA---DP 367
+ A + +E +S +I N + K+ A EL R+ R G+ P
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELM-RSLRDGSLRVSP 179
Query: 368 NAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVD 427
+ T+ D + G + A + I G +VP+ T + + ++
Sbjct: 180 DTVTFSTLIDGLCKCGQIDEACSVFDDMI------AGGYVPNVITYNALVNGLCKADKME 233
Query: 428 GAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 461
A +E + V + L+ + A R
Sbjct: 234 RAHAMIESMVDKGVTPDVITYSVLVDAFCKASRV 267
>gi|410110059|gb|AFV61109.1| pentatricopeptide repeat-containing protein 123, partial
[Acantholippia salsoloides]
Length = 433
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 121/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 9 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 68
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S PD YN + A +I EM+ G V + ++S L ++Y
Sbjct: 69 IFSRLKRSGFTPDLVAYNAXINVFGKAKLFREARSLISEMRIAG-VMPNTASYSTLLTMY 127
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A EL DL+ +I +YGQ G E +++ +R
Sbjct: 128 VENKKFLEALSVFSELREMKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 187
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 188 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 247
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 248 MQGRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 287
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 8/207 (3%)
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
EM+ ++ PD YTY+ + A +++M++D RV D +SNL + +
Sbjct: 2 EMRDRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIELSRKL 60
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANI 300
+ KA L+ DL AY I ++G+ E + +R+A PNTA
Sbjct: 61 CDYSKAISIFSRLKRSGFTPDLVAYNAXINVFGKAKLFREARSLISEMRIAGVMPNTA-- 118
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
SY ++ + V K A F E D+ N+MI Y + G + A++L
Sbjct: 119 SYSTLLTMYVENKKFLEALSVFSELREMKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM 178
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKL 387
R+ G +PN ++ Y GD +L
Sbjct: 179 RKMGIEPNVVSYNTLLRVY---GDAEL 202
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 108/221 (48%), Gaps = 20/221 (9%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 220 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQGRGIEPNSITYSTIISIWGKVGKLDRAAML 279
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S + D + + A ++ A+R++ E+K + D T LA
Sbjct: 280 FQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKSPDNIPRD-TAIHILAG--- 335
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A + + +D++ ++ +I L Y + N+ EV+ R L FP++
Sbjct: 336 -AGRIEEATYVFRRAIDAGEVKDITVFERMIHLFSKYKKYANVVEVFDKMRGLGY-FPDS 393
Query: 298 ANISYLNMIQVLVN----LKDLPGAEKCFKEW-ESGCATYD 333
N+I +++N L + A + E E GC D
Sbjct: 394 ------NVIALVLNAYGKLHEFDKANSVYMEMQEVGCVFSD 428
>gi|255661186|gb|ACU25762.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 426
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 121/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 6 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 65
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S PD YN + A +I EM+ G V + +++ L ++Y
Sbjct: 66 IFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAG-VMPNTASYTTLLTMY 124
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ +R
Sbjct: 125 VENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 245 MQNRGIEPNSITYSTIISIWGKAGKLDRAAMLFQKLRSSG 284
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 109/221 (49%), Gaps = 20/221 (9%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKAGKLDRAAML 276
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S + D Y + A ++ A+R++ E+K + D T LA
Sbjct: 277 FQKLRSSGVEIDQVLYQTMIVAYEKAGLVAHAKRLLHELKSPDNIPRD-TAIHILAG--- 332
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + RD++ ++ +I L Y + N+ EV+ R L FP++
Sbjct: 333 -AGRIEEATYVFRQAIDAGEVRDITVFERMIHLFSKYKKYANVVEVFDKMRGLGY-FPDS 390
Query: 298 ANISYLNMIQVLVN----LKDLPGAEKCFKEW-ESGCATYD 333
N+I +++N L + A + E E GC D
Sbjct: 391 ------NVIALVLNAYGKLHEFDKANGVYMEMQEVGCVFSD 425
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 8/202 (3%)
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
++ PD YTY+ + A +++M++D RV D +SNL + + + K
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNM 305
A L+ DL AY +I ++G+ E + +R A PNTA SY +
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTA--SYTTL 120
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
+ + V K A F E D+ N+MI Y + G + A++L R+ G
Sbjct: 121 LTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180
Query: 366 DPNAKTWEIFSDYYLRNGDMKL 387
+PN ++ Y GD +L
Sbjct: 181 EPNVVSYNTLLRVY---GDAEL 199
>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 138/331 (41%), Gaps = 26/331 (7%)
Query: 57 EVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL 116
E L + K Y + L NME G+ + I ++ + + + + L
Sbjct: 71 EFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCR------CSRFVIAL 124
Query: 117 PETSK--------NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLY 168
K + +T SL+N +C+ A L+ KM+E+ + +N+++ +
Sbjct: 125 SVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGF 184
Query: 169 AKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM-KRDGRVAA 227
KTG + M+ + D+ TYN + L S A R++ +M RD +
Sbjct: 185 CKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRD--IVP 242
Query: 228 DWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI---TLYGQTGNLSEVY 284
+ TF+ L + +V G F +A++ +E+ R D+ Y +I ++GQ ++
Sbjct: 243 NVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQIL 302
Query: 285 RIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAY 344
+ + + FP+ ++Y +I K + K +E D N +I Y
Sbjct: 303 DLMVT-KGCFPDV--VTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGY 359
Query: 345 AKEGRLENAEELKERARRRGADPNAKTWEIF 375
+ GR + A+E+ R G+ PN +T+ I
Sbjct: 360 FQAGRPDAAQEIFSRM---GSRPNIRTYSIL 387
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/304 (19%), Positives = 122/304 (40%), Gaps = 7/304 (2%)
Query: 157 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
S + F+ L++ AK+ + + + ++ M+ I D YTYN+ + L + A V+
Sbjct: 68 SIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSVV 127
Query: 217 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 276
+M + G D T S+L + + + A + ++E D+ Y +I + +
Sbjct: 128 GKMMKFG-YEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCK 186
Query: 277 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 336
TG ++ ++ + ++Y +++ L A + ++ ++
Sbjct: 187 TGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVIT 246
Query: 337 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 396
+I A+ +EG+ A++ E RR DP+ T+ +G + A L+ +
Sbjct: 247 FTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMV 306
Query: 397 DTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYA 456
G P T T + F + K VD + + + + F +I+ Y
Sbjct: 307 TKG------CFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYF 360
Query: 457 AAGR 460
AGR
Sbjct: 361 QAGR 364
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 119/310 (38%), Gaps = 41/310 (13%)
Query: 74 ALKLSENMEKRGMNK-TVSDQAIHLDLVAKVQGIDAAENYF-VDLPETSKNHLTYGSLLN 131
AL L ME+ G+ TV+ ++ L + DAA + + + N +T+ +L+N
Sbjct: 193 ALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALIN 252
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ +E +A+ E+M + +NS++ G ++ I+ M P
Sbjct: 253 AFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFP 312
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D TYN + + +++ EM + G V D TF+ + Y +AG + A+
Sbjct: 313 DVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLV-VDTVTFNTIIQGYFQAGRPDAAQEI 371
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
+ +R R S I LYG N +R+ ++L L
Sbjct: 372 FSRMGSRPNIRTYS-----ILLYGLCYN----WRVEKALVL------------------- 403
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
F+ + DI N++I G +E+A +L +G +P+ T
Sbjct: 404 ----------FESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVT 453
Query: 372 WEIFSDYYLR 381
+ + R
Sbjct: 454 YTTMISGFCR 463
>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1245
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 80/382 (20%), Positives = 157/382 (41%), Gaps = 20/382 (5%)
Query: 20 HLEEALYDRLFKKGSSDVSV---RQQLNQFLK---SKKRVFKWEVGDTLKKLRDRKL--- 70
H E Y+ L S++ V RQ LN+ L S V T L D +
Sbjct: 295 HPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHV-------TFNALIDGHISEG 347
Query: 71 -YYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYG 127
+ ALK+ ME +G+ T + LD + K D A +++ + +TY
Sbjct: 348 NFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYT 407
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 187
+++ CK ++A +L +M + + + +++L+ + + G + I+ +
Sbjct: 408 GMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRV 467
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
+ P+ Y+ + + + R+ E M +G D TF+ L + +AG +
Sbjct: 468 GLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGN-TPDHFTFNVLVTSLCKAGKVAE 526
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 307
AE ++ + + + ++ LI YG +G + + ++ + + +Y ++++
Sbjct: 527 AEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLK 586
Query: 308 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
L L AEK K ++ A D + N +I A K G L+ A L +R P
Sbjct: 587 GLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILP 646
Query: 368 NAKTWEIFSDYYLRNGDMKLAV 389
++ T+ R G +A+
Sbjct: 647 DSFTYTSLISGLCRKGKTVIAI 668
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 89/399 (22%), Positives = 165/399 (41%), Gaps = 25/399 (6%)
Query: 71 YYPALKLSENMEKRGMNKTVS--DQAIHLDLVAKVQGIDAAENYFV--DLPE--TSKNHL 124
+ A++L ++M +G+N V + IH DL + +A+ Y + D+ + N +
Sbjct: 244 FKAAIELLDHMNLKGVNADVCTYNMLIH-DLCRSNR---SAKGYLLLRDMRKRMIHPNEV 299
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY +LLN + E A LL +M L + + FN+L+ + G+ ++ + M
Sbjct: 300 TYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMM 359
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+A ++ +Y V + L + A MKR+G V T++ + + G
Sbjct: 360 EAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNG-VCVGRITYTGMIDGLCKNGF 418
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE----VYRIWRSLRLAFPNTANI 300
++A L E+ D+ Y LI + + G L V RI+R + L+ PN I
Sbjct: 419 LDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYR-VGLS-PN--GI 474
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
Y +I + L + ++ T D NV++ + K G++ AEE
Sbjct: 475 IYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCM 534
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 420
G PNA +++ + Y +G+ A ++ G P+ T + ++
Sbjct: 535 TSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHH------PTFFTYGSLLKGL 588
Query: 421 EQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
+ + AE FL+ L+ + + LI +G
Sbjct: 589 CKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSG 627
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 132/342 (38%), Gaps = 19/342 (5%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY ++L+ YCK+ + A LL+ M + +N L+ ++ K ++++
Sbjct: 229 VTYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRD 288
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ I P+ TYN + + + A +++ EM G ++ + TF+ L ++ G
Sbjct: 289 MRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFG-LSPNHVTFNALIDGHISEG 347
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
F++A + +E + +Y L+ + + ++ I+Y
Sbjct: 348 NFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYT 407
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
MI L L A E DI + +I + + GRL+ A+E+ R R
Sbjct: 408 GMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRV 467
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQE 423
G PN + R G +K + E I G P T + +
Sbjct: 468 GLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGN------TPDHFTFNVLVTSLCKA 521
Query: 424 KDVDGAEGFLE------ILKKAVDDLGVEVFEPLIRTYAAAG 459
V AE F+ IL AV F+ LI Y ++G
Sbjct: 522 GKVAEAEEFMRCMTSDGILPNAVS------FDCLINGYGSSG 557
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 35/205 (17%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
TYGSLL CK AE L+ ++ + ++ N+L+T K+G+ +K ++ E
Sbjct: 579 FTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGE 638
Query: 184 MKASSIMPDSYTYNVWMRALA-------AVNDISGAE--------RVIEEMKRDGRVAA- 227
M SI+PDS+TY + L A+ AE +V+ DG A
Sbjct: 639 MVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAG 698
Query: 228 -------------------DWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQ 268
D T + + Y G EK L E+ N+N +L+ Y
Sbjct: 699 QWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYN 758
Query: 269 FLITLYGQTGNLSEVYRIWRSLRLA 293
L+ Y + ++S + ++RS+ L+
Sbjct: 759 ILLHGYSKRKHVSTSFMLYRSMILS 783
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/270 (17%), Positives = 109/270 (40%), Gaps = 1/270 (0%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
+ N + L+ Y +E M + + + M S N+++ K+ +
Sbjct: 119 CNSNPSVFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVW 178
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+ ++EM I PD T+N+ + L A + ++++M++ G A T++ +
Sbjct: 179 SFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGY-APTIVTYNTVLHW 237
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
Y + G F+ A L + + + D+ Y LI ++ ++ Y + R +R +
Sbjct: 238 YCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPN 297
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
++Y ++ N + A + E + + + N +I + EG + A ++
Sbjct: 298 EVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFH 357
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLA 388
+G ++ + D +N + LA
Sbjct: 358 MMEAKGLIGTEVSYGVLLDGLCKNAEFDLA 387
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%)
Query: 140 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 199
++A LL M ++ L + F +LM L+ K G+ + + M + D +YNV
Sbjct: 946 DEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVL 1005
Query: 200 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
+ L A D++ A + EEMKRDG +A T + + I + F + LK+L R
Sbjct: 1006 ITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVGGILSQGTEFSGTDIILKDLLAR 1064
>gi|8920567|gb|AAF81289.1|AC027656_6 Contains similarity to a hypothetical protein F23N19.4 gi|6630464
from Arabidopsis thaliana BAC F23N19 gb|AC007190. It
contains a PPR repeat domain PF|01535 [Arabidopsis
thaliana]
Length = 797
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 104/504 (20%), Positives = 211/504 (41%), Gaps = 60/504 (11%)
Query: 14 AKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWE----VGDTLKKLRDR- 68
+R K L+ L L ++GS S +L + L + R KWE V D L L R
Sbjct: 96 GQRRFKELQVILEQLLQEEGSGSAS---RLCELLSNSFR--KWESTGLVWDMLLFLSSRL 150
Query: 69 KLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGS 128
++ +L + + M+ + +N VS Q+ + ++ + D + + ++ + KN TY +
Sbjct: 151 RMVDDSLYILKKMKDQNLN--VSTQSYN-SVLYHFRETDKMWDVYKEIKD--KNEHTYST 205
Query: 129 LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS 188
+++ C++ E A L + ++G S + FNS+M+ Y K G + + +
Sbjct: 206 VVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCG 265
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
++P Y++N+ + L V I+ A + +M + G V D T++ LA + G+ A
Sbjct: 266 LVPSVYSHNILINGLCLVGSIAEALELASDMNKHG-VEPDSVTYNILAKGFHLLGMISGA 324
Query: 249 ERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS-LRLAFPNTANISYLNMIQ 307
++++ ++ D+ Y L+ Q GN+ + + L F + I M+
Sbjct: 325 WEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLS 384
Query: 308 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
L + A F + ++ + D+ +++I K G+ + A L + + P
Sbjct: 385 GLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILP 444
Query: 368 NAKT-----------------------------------WEIFSDYYLRNGDMKLAVDCL 392
N++T + I D Y ++G ++ A++
Sbjct: 445 NSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELF 504
Query: 393 EKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLI 452
+ I+TG PS T + + + + +++ A L+++K V + L+
Sbjct: 505 KVVIETG------ITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 558
Query: 453 RTYAAAGRTSPV--MLRRLKMEKV 474
YA G T + + R +K E +
Sbjct: 559 DAYANCGNTKSIDELRREMKAEGI 582
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 187/436 (42%), Gaps = 27/436 (6%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAK----VQGIDAAENYFVDLPE--TSKNHLTYG 127
AL+L+ +M K G V ++ +++AK + I A D+ + S + +TY
Sbjct: 289 ALELASDMNKHG----VEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYT 344
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGF---SSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
LL C+ + LL+ M L+ GF S +P + +++ KTG ++ ++ +M
Sbjct: 345 ILLCGQCQLGNIDMGLVLLKDM--LSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQM 402
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
KA + PD Y++ + L + A + +EM D R+ + T L + G+
Sbjct: 403 KADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMC-DKRILPNSRTHGALLLGLCQKGM 461
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+A L L + D+ Y +I Y ++G + E +++ + + ++ +
Sbjct: 462 LLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNS 521
Query: 305 MIQVLVNLKDLPGAEKCFKEWE-SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I +++ A K + G A + T +M AYA G ++ +EL+ +
Sbjct: 522 LIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM-DAYANCGNTKSIDELRREMKAE 580
Query: 364 GADPNAKTWEIFSDYYLR-----NGDMKLAVDCLEKAIDTGRGDGGKWVPSSE-TIRTFM 417
G P T+ + R N + L EK R + +P + T T +
Sbjct: 581 GIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTII 640
Query: 418 RHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG--RTSPVMLRRLKMEKVE 475
++ + K + GA FLEI+K D + LI + G R + + L+ + V
Sbjct: 641 QYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVS 700
Query: 476 VSE-ASKKLLEAICVE 490
+S+ A L++A CV+
Sbjct: 701 LSKFAYTTLIKAHCVK 716
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 100/234 (42%), Gaps = 18/234 (7%)
Query: 59 GDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE 118
G L L + + A L +++ G + I +D AK I+ A F + E
Sbjct: 450 GALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIE 509
Query: 119 T--SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK 176
T + + T+ SL+ YCK +A +L+ +K L S + + +LM YA G+ +
Sbjct: 510 TGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKS 569
Query: 177 IPAIIQEMKASSIMPDSYTYNVWMRALA------AVNDISGAERVIEEMKRDGR------ 224
I + +EMKA I P + TY+V + L N + ER+ E+ K+ R
Sbjct: 570 IDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVL-RERIFEKCKQGLRDMESEG 628
Query: 225 VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI---TLYG 275
+ D T++ + A L+ +++RN + Y LI +YG
Sbjct: 629 IPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYG 682
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 137/343 (39%), Gaps = 17/343 (4%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
AL L MEK + V +D + K + +D A + F ++ + TY L++
Sbjct: 234 ALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLIS 293
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM-KASSIM 190
C C A LL M E N+ + FN+L+ + K G + + EM K+
Sbjct: 294 CLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCF 353
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
PD YN ++ + V EM + G V + T++ L + +A + A+
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG-NTVTYTTLIHGFFQARDCDNAQM 412
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
K++ + H D+ Y L+ GN+ ++ ++ ++Y MI+ L
Sbjct: 413 VFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALC 472
Query: 311 NLKDLPGAEKCFKEWESGCATY------DIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
A K W+ C+ ++ M+ + ++G E A+ L + G
Sbjct: 473 K------AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDG 526
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG-RGDGGKW 406
PN+ T+ LR+GD + + +++ G GD +
Sbjct: 527 PLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF 569
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 116/252 (46%), Gaps = 6/252 (2%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TYG+++N CK + A LL KM++ + + +N+++ K H + + +
Sbjct: 216 VTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNK 275
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ I PD +TYN + L S A R++ +M + + D F+ L +V+ G
Sbjct: 276 METKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM-LEKNINPDLVFFNALIDAFVKEG 334
Query: 244 LFEKAERALKEL-ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWR--SLRLAFPNTANI 300
+AE+ E+ ++++ D+ AY LI + + + E ++R S R NT +
Sbjct: 335 KLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT--V 392
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
+Y +I +D A+ FK+ S DI N+++ G +E A + E
Sbjct: 393 TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYM 452
Query: 361 RRRGADPNAKTW 372
++R + T+
Sbjct: 453 QKRDMKLDIVTY 464
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 135/337 (40%), Gaps = 15/337 (4%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S N TY +N +C+ A A+L KM +L G S + NSL+ + + A
Sbjct: 107 SHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVA 166
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
++ +M PD+ T+ + L N S A ++E M G D T+ + +
Sbjct: 167 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG-CQPDLVTYGAVINGL 225
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
+ G + A L ++E D+ Y +I + ++ + + ++ +
Sbjct: 226 CKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDV 285
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL-KE 358
+Y +I L N A + + D+ N +I A+ KEG+L AE+L E
Sbjct: 286 FTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDE 345
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 418
+ + P+ + + + ++ ++ + G V ++ T T +
Sbjct: 346 MVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRG------LVGNTVTYTTLIH 399
Query: 419 HFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 455
F Q +D D A+ + K+ V D GV P I TY
Sbjct: 400 GFFQARDCDNAQ---MVFKQMVSD-GV---HPDIMTY 429
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 43/231 (18%), Positives = 99/231 (42%), Gaps = 4/231 (1%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+ Y +L+ +CK E+ + +M + L +++ + +L+ + + + + ++
Sbjct: 357 VAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 416
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYVEA 242
M + + PD TYN+ + L ++ A V E M KRD ++ D T++ + +A
Sbjct: 417 MVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKL--DIVTYTTMIEALCKA 474
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY 302
G E L + ++ Y +++ + + G E ++ ++ P + +Y
Sbjct: 475 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTY 534
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
+I+ + D + + KE S C T ++ +GRL+ +
Sbjct: 535 NTLIRARLRDGDEAASAELIKEMRS-CGFAGDASTFGLVTNMLHDGRLDKS 584
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 65/132 (49%), Gaps = 2/132 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
AL + E M+KR M + ++ + K ++ + F + L N +TY ++++
Sbjct: 445 ALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMS 504
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C++ + E+A+AL +MKE +S +N+L+ + G +I+EM++
Sbjct: 505 GFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAG 564
Query: 192 DSYTYNVWMRAL 203
D+ T+ + L
Sbjct: 565 DASTFGLVTNML 576
>gi|357120648|ref|XP_003562037.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Brachypodium distachyon]
Length = 807
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 129/288 (44%), Gaps = 9/288 (3%)
Query: 107 DAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMT 166
D E Y V LP ++LTY SL+ + EKA L KM L +P++ +++
Sbjct: 483 DCMERYGV-LP----DYLTYSSLIQLLSTAKLPEKALYYLRKMHAAELPIDCVPYSVIIS 537
Query: 167 LYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA 226
+AK + + + +EM S I D+Y Y++ + A A V ++ A + + G
Sbjct: 538 SFAKKDNLHMVECLFREMATSGICADAYVYSILIDAYAEVGNVHQAAAYFGLVTKAGLCE 597
Query: 227 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
+ T +++L +Y +AG +A K L++ + +L A +I+LY ++E I
Sbjct: 598 SS-TIYNSLIKLYTKAGYLAEAHETYKLLKSLDTDTNLYASNCMISLYSDHCMVNEAREI 656
Query: 287 WRSLRLAFPNTAN-ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 345
+ SL+ + AN S+ M+ + + A + KE ++ + N +I Y
Sbjct: 657 FESLKAS--GCANEFSHAMMVCLYKKVARYDEAHRISKEMQALGLLTQVLSYNSVIQMYI 714
Query: 346 KEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
G+ E A ++ + PN T++ ++ G + + LE
Sbjct: 715 SCGKTEEAVKIFQNMLASSTPPNDATFKALKVILVKEGVSNIEITKLE 762
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 122/291 (41%), Gaps = 24/291 (8%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N TY +L++ Y K EK +M + FN+L+ ++ K E++ +++
Sbjct: 252 NLYTYNTLIDTYGKAGQLEKVSDAFSQMLREGVVPDIFTFNTLIHVWGKHHRMEQVSSLV 311
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+ M+ +PD+ TYN+ + +++I AE +MK + V D + L Y
Sbjct: 312 RMMEEFQCLPDTRTYNILISLYREIDEIDVAEFYFCKMKAENLV-PDTVSCRTLLYGYST 370
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G+ KAE +KE++ D L +Y TG L R WR +
Sbjct: 371 RGMVTKAEALIKEMDESGLVIDEYTQSALTRMYVNTGMLE---RSWRWFERFCHQMGSEC 427
Query: 302 YLNMIQVLVNLKDLPGAEK---CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+ I + AEK C E + C + V NVMI AY +L+ A E+ +
Sbjct: 428 FSANIDAFGEKGCIILAEKAFMCCLERKMLC----VSVCNVMIKAYGLVEKLDEACEVAD 483
Query: 359 RARRRGADPNAKTW----EIFSD--------YYLRNGD-MKLAVDCLEKAI 396
R G P+ T+ ++ S YYLR +L +DC+ ++
Sbjct: 484 CMERYGVLPDYLTYSSLIQLLSTAKLPEKALYYLRKMHAAELPIDCVPYSV 534
>gi|356567150|ref|XP_003551784.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Glycine max]
Length = 875
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 126/280 (45%), Gaps = 10/280 (3%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI-PAI 180
+ LTY SLL + + LL +M+ +G +N+ + K G + AI
Sbjct: 294 DRLTYNSLLKTCVAKGRWQLCRDLLAEMEWKGIGRDVYTYNTYVDALCKGGRMDLARHAI 353
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
EM A +I+P+ TY+ M + A + +EMK + D +++ L +Y
Sbjct: 354 DVEMPAKNILPNVVTYSTLMAGYSKAERFEDALNIYDEMKHL-LIRLDRVSYNTLVGLYA 412
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTA 298
G FE+A KE+E D+ Y LI YG+ EV +++ + R +PN
Sbjct: 413 NLGWFEEAVGKFKEMECCGIKNDVVTYNALIEGYGRHNKYVEVRKLFDEMKARRIYPN-- 470
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+++Y +I++ + A ++E + D+ + +I A K G +E++ L +
Sbjct: 471 DLTYSTLIKIYTKGRMYAEAMDVYRELKQEGMKTDVVFYSALIDALCKNGLIESSLRLLD 530
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 398
+G+ PN T+ D + R G A++C A+DT
Sbjct: 531 VMTEKGSRPNVVTYNSIIDAF-RIGQQLPALEC---AVDT 566
>gi|255565671|ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536913|gb|EEF38551.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 528
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 118/262 (45%), Gaps = 6/262 (2%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+ + L++ C++ +A++ + +K+ + + +L+ + + G+ + + E
Sbjct: 213 IAFSILISILCRKRRATEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIPEAERVFTE 271
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
MK + MP+ YTY + + AL I+ A V EM G + TF+NL ++V+AG
Sbjct: 272 MKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEMLDVG-CEPNSITFNNLLRVHVKAG 330
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANIS 301
EK + +++ D Y FLI + + GNL E ++ S+ + PN + +
Sbjct: 331 RTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCSPNAS--T 388
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
+ + + L+D+ GA + + + + + N+++ + + +LK+
Sbjct: 389 FNGLFGSIAKLRDVNGAHRLYAKMKELKCKANTVTYNILMRMFVDTKSTDMVLKLKKEMD 448
Query: 362 RRGADPNAKTWEIFSDYYLRNG 383
+PN T+ + Y G
Sbjct: 449 EDDVEPNVNTYCVLIAMYCGMG 470
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 103/212 (48%), Gaps = 3/212 (1%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELM 138
M+ G V I +D + + I A + F ++ + N +T+ +LL + K
Sbjct: 272 MKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEMLDVGCEPNSITFNNLLRVHVKAGR 331
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
TEK + +MK + ++ +N L+ + K G+ ++ ++ M P++ T+N
Sbjct: 332 TEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCSPNASTFNG 391
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
++A + D++GA R+ +MK + + A+ T++ L ++V+ + + KE++
Sbjct: 392 LFGSIAKLRDVNGAHRLYAKMK-ELKCKANTVTYNILMRMFVDTKSTDMVLKLKKEMDED 450
Query: 259 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
+ +++ Y LI +Y G+ + Y+ +R +
Sbjct: 451 DVEPNVNTYCVLIAMYCGMGHWNNAYKFFREM 482
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 135/327 (41%), Gaps = 16/327 (4%)
Query: 155 GFSSMP--FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA 212
GF+ P +N ++ L K + + +I MKA ++ T+++ +R S A
Sbjct: 137 GFTHHPEPYNEMIDLAGKVRNFDLGWQVIDLMKARNVEISIETFSILIRRYVRAGLASEA 196
Query: 213 ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLIT 272
M+ D D FS L SI +A+ L+++ D+ Y L+
Sbjct: 197 VHAFNRME-DYNCKPDKIAFSILISILCRKRRATEAQSFFDSLKDK-FEPDVIVYTNLVR 254
Query: 273 LYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGC 329
+ + GN+ E R++ +++A PN +Y +I L + A F E + GC
Sbjct: 255 GWCRAGNIPEAERVFTEMKVAGCMPNV--YTYTIVIDALCRCGQITRAHDVFAEMLDVGC 312
Query: 330 ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 389
I N ++ + K GR E ++ + +R G P+ T+ + + ++G++ A+
Sbjct: 313 EPNSITFNN-LLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEAL 371
Query: 390 DCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFE 449
L + G P++ T + +DV+GA +K+ +
Sbjct: 372 KVLNSMVKKGCS------PNASTFNGLFGSIAKLRDVNGAHRLYAKMKELKCKANTVTYN 425
Query: 450 PLIRTYAAAGRTSPVMLRRLKMEKVEV 476
L+R + T V+ + +M++ +V
Sbjct: 426 ILMRMFVDTKSTDMVLKLKKEMDEDDV 452
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 134/304 (44%), Gaps = 7/304 (2%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY L++ +CK+ E+A +L +M +++ +N+L++ K G + + EM
Sbjct: 419 TYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEM 478
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ PD +T+N + L V+++ A + +M +G V A+ TF+ L ++ G
Sbjct: 479 SSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEG-VIANSVTFNTLIHAFLRRGE 537
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
++A + + ++ R D Y LI +TG + + ++ + + I+
Sbjct: 538 IQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNI 597
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+I + A + ++ + DI N +I K GR++ A L E+ + G
Sbjct: 598 LINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEG 657
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 424
P++ T+ + R G A L + ++ G +VP+ T + +F ++
Sbjct: 658 IQPDSITYNTLICWLCREGAFDDACFLLYRGVENG------FVPNDVTWNILVYNFGKQS 711
Query: 425 DVDG 428
+ +G
Sbjct: 712 NSEG 715
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 106/270 (39%), Gaps = 39/270 (14%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
+ N +TYG L++ CK ++A+ALL K+ N+ + FN+L+ + + G + A
Sbjct: 312 TPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNV----VHFNTLVNGFVRNGRLNEATA 367
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
V ++M +G V D TFS L +
Sbjct: 368 F----------------------------------VYDKMINNGYVP-DVFTFSTLVNGL 392
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
+ GLF A + +++ + +L+ Y LI + + G L E I R + +
Sbjct: 393 CKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNT 452
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+ Y +I L + A F E S DI N +I + +E+A L
Sbjct: 453 VGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRD 512
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAV 389
G N+ T+ +LR G+++ A+
Sbjct: 513 MVLEGVIANSVTFNTLIHAFLRRGEIQEAL 542
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 53/294 (18%), Positives = 107/294 (36%), Gaps = 41/294 (13%)
Query: 95 IHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKEL 152
+ LD++ A N F D+ S N T+G ++ C + A LL M +
Sbjct: 180 VVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKH 239
Query: 153 NLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA 212
+SM + +L+ +K ++ +++EM PD T+N + +N +
Sbjct: 240 GCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEG 299
Query: 213 ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLIT 272
++++ M G D T+ L + ++A+ L ++ N + L+
Sbjct: 300 AKLVDRMILKGFTPNDM-TYGYLMHGLCKTCRIDEAQALLSKVPGPNVVH----FNTLVN 354
Query: 273 LYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY 332
+ + G L+E + + N Y+
Sbjct: 355 GFVRNGRLNE------ATAFVYDKMINNGYVP---------------------------- 380
Query: 333 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 386
D+ + ++ K+G +A EL +G PN T+ I D + + G ++
Sbjct: 381 DVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLE 434
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 125/316 (39%), Gaps = 24/316 (7%)
Query: 145 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSY-TYNVWMRAL 203
LL +MKE + F F +M Y + G P + ++ +MK S+ +YNV + L
Sbjct: 126 LLLQMKEEGIVFRESLFILIMKYYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDVL 185
Query: 204 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 263
N S A V +M G D+ TF + + A L+++ +
Sbjct: 186 VVGNCPSVASNVFYDMLSKGVSPNDY-TFGLVMKALCMVNEVDNACLLLRDMTKHGCVPN 244
Query: 264 LSAYQFLITLYGQTGNLSEVYRIWRSLRL-AFPNTANISYLNMIQVLVNL-KDLPGAEKC 321
YQ LI + + E ++ + L P N ++ +I L + L GA+
Sbjct: 245 SMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVN-TFNTVIYGFCRLNRVLEGAKLV 303
Query: 322 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 381
+ G D+ +M G K R++ A+ L + PN + + ++R
Sbjct: 304 DRMILKGFTPNDMTYGYLMHG-LCKTCRIDEAQALLSKV----PGPNVVHFNTLVNGFVR 358
Query: 382 NGDMKLAVDCL-EKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 440
NG + A + +K I+ G +VP T T + ++ A LE+ V
Sbjct: 359 NGRLNEATAFVYDKMINNG------YVPDVFTFSTLVNGLCKKGLFGSA---LEL----V 405
Query: 441 DDLGVEVFEPLIRTYA 456
+D+ + +P + TY
Sbjct: 406 NDMDAKGCKPNLNTYT 421
>gi|410110149|gb|AFV61154.1| pentatricopeptide repeat-containing protein 123, partial
[Xeroaloysia ovatifolia]
Length = 431
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 121/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 9 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 68
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S PD YN + A +I EM+ G V + +++ L ++Y
Sbjct: 69 IFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAG-VMPNTASYTTLLTMY 127
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ +R
Sbjct: 128 VENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 187
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 188 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQE 247
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 248 MQNRGIEPNSITYSTIISIWGKAGKLDRAAMLFQKLRSSG 287
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 8/207 (3%)
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
EM+ ++ PD YTY+ + A +++M++D RV D +SNL + +
Sbjct: 2 EMRERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIELSRKL 60
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANI 300
+ KA L+ DL AY +I ++G+ E + +R A PNTA
Sbjct: 61 CDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTA-- 118
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
SY ++ + V K A F E D+ N+MI Y + G + A++L
Sbjct: 119 SYTTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM 178
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKL 387
R+ G +PN ++ Y GD +L
Sbjct: 179 RKMGIEPNVVSYNTLLRVY---GDAEL 202
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 109/221 (49%), Gaps = 20/221 (9%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 220 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKAGKLDRAAML 279
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S + D Y + A ++ A+R++ E+K + D T LA
Sbjct: 280 FQKLRSSGVEIDQVLYQTMIVAYEKAGLVAHAKRLLHELKSPDNIPRD-TAIHILAG--- 335
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + RD++ ++ +I L Y + N+ EV+ R L FP++
Sbjct: 336 -AGRIEEATYVFRQAIDAGEVRDITVFERMIHLFSKYKKYANVVEVFDKMRGLGY-FPDS 393
Query: 298 ANISYLNMIQVLVN----LKDLPGAEKCFKEW-ESGCATYD 333
N+I +++N L + A + E E GC D
Sbjct: 394 ------NVIALVLNAYGKLHEFDKANGVYMEMQEVGCVFSD 428
>gi|255661146|gb|ACU25742.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 426
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 121/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 6 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 65
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S PD YN + A +I EM+ G V + ++S L ++Y
Sbjct: 66 IFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAG-VTPNTASYSTLLTMY 124
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ +R
Sbjct: 125 VENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 245 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 284
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 109/221 (49%), Gaps = 20/221 (9%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML 276
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S + D Y + A ++ A+R++ E+KR + D I
Sbjct: 277 FQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAI-----HILA 331
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + +D++ ++ +I L Y + GN+ EV+ R L FP++
Sbjct: 332 GAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFNKMRGLGY-FPDS 390
Query: 298 ANISYLNMIQVLVN----LKDLPGAEKCFKEW-ESGCATYD 333
N+I +++N L + A + E E GC D
Sbjct: 391 ------NVIALVLNAYGKLHEFDKANDVYMEMQEVGCVFSD 425
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 8/202 (3%)
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
++ PD YTY+ + A +++M++D RV D +SNL + + + K
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNM 305
A L+ DL AY +I ++G+ E + +R A PNTA SY +
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTA--SYSTL 120
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
+ + V K A F E D+ N+MI Y + G + A++L R+ G
Sbjct: 121 LTMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180
Query: 366 DPNAKTWEIFSDYYLRNGDMKL 387
+PN ++ Y GD +L
Sbjct: 181 EPNVVSYNTLLRVY---GDAEL 199
>gi|255661172|gb|ACU25755.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 426
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 121/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 6 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 65
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S PD YN + A +I EM+ G V + ++S L ++Y
Sbjct: 66 IFSRLKRSRFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAG-VTPNTASYSTLLTMY 124
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ +R
Sbjct: 125 VENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 245 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 284
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 108/221 (48%), Gaps = 20/221 (9%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML 276
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S + D Y + A ++ A+R++ E+KR + D I
Sbjct: 277 FQKLRSSGVDIDQVLYQTMIVAYERSGLVAHAKRLLHELKRPDNIPRDIAI-----HILA 331
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + +D++ ++ +I L Y + GN+ EV+ L FP++
Sbjct: 332 GAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMCGLGY-FPDS 390
Query: 298 ANISYLNMIQVLVN----LKDLPGAEKCFKEW-ESGCATYD 333
N+I +++N L + A + E E GC D
Sbjct: 391 ------NVIALVLNAYGKLHEFDKANDVYMEMQEVGCVFSD 425
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 8/202 (3%)
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
++ PD YTY+ + A +++M++D RV D +SNL + + + K
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNM 305
A L+ DL AY +I ++G+ E + +R A PNTA SY +
Sbjct: 63 AISIFSRLKRSRFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTA--SYSTL 120
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
+ + V K A F E D+ N+MI Y + G + A++L R+ G
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180
Query: 366 DPNAKTWEIFSDYYLRNGDMKL 387
+PN ++ Y GD +L
Sbjct: 181 EPNVVSYNTLLRVY---GDAEL 199
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 131/315 (41%), Gaps = 19/315 (6%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
+ N +Y +LL Y + +A ++ +M+E+ N ++ +Y + G ++
Sbjct: 110 VTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEAD 169
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+ M+ I P+ +YN +R A + M+R + + T++++ I
Sbjct: 170 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN-IEQNVVTYNSMMMI 228
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
Y + EKA ++E++NR + Y +I+++G+ G L +++ LR + +
Sbjct: 229 YGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDID 288
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+ Y MI + A++ E + D ++ I A GR+E A +
Sbjct: 289 QVLYQTMIVAYERSGLVAHAKRLLHELKRP----DNIPRDIAIHILAGAGRIEEATWVFR 344
Query: 359 RARRRGADPNAKTWE----IFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIR 414
+A G + +E +FS Y + G++ V+ +K G + P S I
Sbjct: 345 QAIDAGEVKDITVFERMIHLFSKYK-KYGNV---VEVFDKMCGLG------YFPDSNVIA 394
Query: 415 TFMRHFEQEKDVDGA 429
+ + + + D A
Sbjct: 395 LVLNAYGKLHEFDKA 409
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 120/273 (43%), Gaps = 1/273 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY ++++ CK+ + +A L +M + + + +N+++ + G + +
Sbjct: 235 NVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLF 294
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+EM ++MPD+ T+N+ + L +S A V E M G + T++ L Y
Sbjct: 295 KEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKG-AEPNAYTYNALMDGYCL 353
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
++A + L + + +LS+Y LI Y ++ ++E R+ + ++
Sbjct: 354 HNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVT 413
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y ++Q L + A FKE S D+ ++++ + K G L+ A +L +
Sbjct: 414 YSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMH 473
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
R PN + I G +++A + K
Sbjct: 474 ERRIKPNIILYTILIRGMFIAGKLEVAKELFSK 506
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 127/283 (44%), Gaps = 9/283 (3%)
Query: 116 LPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
+P+T +T+ L++ CKE M +A + E M E ++ +N+LM Y +
Sbjct: 303 MPDT----VTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMD 358
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
+ ++ M P+ +YN+ + ++ A+R++ EM + + D T+S L
Sbjct: 359 EAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMS-EKNLTPDTVTYSTL 417
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLA 293
+ G +A KE+ + DL AY L+ + + G+L E ++ + + R
Sbjct: 418 MQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRI 477
Query: 294 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
PN I Y +I+ + L A++ F + + DI NVMI KEG + A
Sbjct: 478 KPNI--ILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEA 535
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 396
E + G P++ ++ + +L+N D A+ +++ +
Sbjct: 536 YEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMV 578
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 85/434 (19%), Positives = 175/434 (40%), Gaps = 16/434 (3%)
Query: 34 SSDVSVRQQLNQF---LKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTV 90
S+D+S+ L F ++ R E G L + +K Y A+ L M+ G+ V
Sbjct: 72 SNDISIDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNV 131
Query: 91 SDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEK 148
+ ++ + ++ +D A + + + + +T+ +L+N C E ++A L +
Sbjct: 132 YSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNE 191
Query: 149 MKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVND 208
M + + +N+++ K G+ + ++M+ + P+ TYN + +L
Sbjct: 192 MVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRL 251
Query: 209 ISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQ 268
++ A + EM G + D T++ + + G +A R KE+ RN D +
Sbjct: 252 VNEAVEFLSEMVDRG-IPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFN 310
Query: 269 FLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE 326
L+ + G +SE + ++ + A PN + L L N D +
Sbjct: 311 ILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMD-EAIKVLGIMIG 369
Query: 327 SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 386
GCA ++ N++I Y K R+ A+ L + P+ T+ + G +
Sbjct: 370 KGCAP-NLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPR 428
Query: 387 LAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVE 446
A++ ++ +G +P + F + +D A L+ + + +
Sbjct: 429 EALNLFKEMCSSG------LLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNII 482
Query: 447 VFEPLIRTYAAAGR 460
++ LIR AG+
Sbjct: 483 LYTILIRGMFIAGK 496
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 97/223 (43%), Gaps = 17/223 (7%)
Query: 77 LSENMEKRGM-------NKTVSDQAIH--LDLVAKVQGIDAAENYFVDLPETSKNHLTYG 127
+SE M ++G N + +H +D KV GI + + N +Y
Sbjct: 328 VSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKG-------CAPNLSSYN 380
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 187
L+N YCK +A+ LL +M E NL ++ +++LM + G P + + +EM +S
Sbjct: 381 ILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSS 440
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
++PD Y++ + + A ++++EM + R+ + ++ L AG E
Sbjct: 441 GLLPDLMAYSILLDGFCKHGHLDEALKLLKEM-HERRIKPNIILYTILIRGMFIAGKLEV 499
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
A+ +L D+ Y +I + G E Y +R +
Sbjct: 500 AKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKM 542
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 68/150 (45%), Gaps = 1/150 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+ Y LL+ +CK ++A LL++M E + + + + L+ G E + +
Sbjct: 447 MAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSK 506
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
+ A I PD +TYNV ++ L A +M+ DG + D +++ + +++
Sbjct: 507 LSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFL-PDSCSYNVIIQGFLQNQ 565
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITL 273
A + + E+ + D S +Q L+ L
Sbjct: 566 DSSTAIQLIDEMVGKRFSADSSTFQMLLDL 595
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 132/302 (43%), Gaps = 4/302 (1%)
Query: 80 NMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKEL 137
+M ++G+ ++L +K I AE YF D+ + N++ Y L+ +C
Sbjct: 546 DMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVG 605
Query: 138 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 197
T +A + + M E L +++++ +K G ++ + + + ++PD + YN
Sbjct: 606 NTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYN 665
Query: 198 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 257
+ DI A ++ +EM +G + + ++ L + + G KA E+E
Sbjct: 666 SLISGFCKEGDIEKASQLYDEMLHNG-INPNIVVYNTLINGLCKLGEVTKARELFDEIEE 724
Query: 258 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 317
++ D+ Y +I Y ++GNL+E ++++ + + Y +I +L
Sbjct: 725 KDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEK 784
Query: 318 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 377
A F E + + + N +I ++ K G++ A EL + + PN T+ I D
Sbjct: 785 ALSLFHEAQQK-SVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILID 843
Query: 378 YY 379
Y
Sbjct: 844 AY 845
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 82/406 (20%), Positives = 172/406 (42%), Gaps = 46/406 (11%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLN 131
AL++ + M ++G+ + +D K + A+ F +P + + N TY +L++
Sbjct: 295 ALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALID 354
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ KE E+A + ++M L + + +N+++ AK G K ++ EM + + P
Sbjct: 355 GFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEP 414
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D++TYN+ + +D++ A ++ EMK + + T+S L S + +KA
Sbjct: 415 DTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPF-TYSVLISGLCHSSDLQKANEV 473
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
L ++ ++ Y LI Y Q Y + + ++++++
Sbjct: 474 LDQMIRNGVKPNVFMYGTLIKAYVQESR----YEMA---------------IELLKIMIA 514
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
LP D+ N +I + ++E A+ L +G PNA T
Sbjct: 515 NGVLP----------------DLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHT 558
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR-HFEQEKDVDGAE 430
+ F + Y ++G++++A + + +G VP++ ++ H + V+
Sbjct: 559 YGAFINLYSKSGEIQVAERYFKDMLSSG------IVPNNVIYTILIKGHCDVGNTVEALS 612
Query: 431 GFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEV 476
F +L+K + + + +I + + G+T M LK K V
Sbjct: 613 TFKCMLEKGLIP-DIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGV 657
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 113/267 (42%), Gaps = 10/267 (3%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
TY L++ C +KA +L++M + + + +L+ Y + E +++
Sbjct: 452 FTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKI 511
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M A+ ++PD + YN + L + A+ ++ +M G + + T+ ++Y ++G
Sbjct: 512 MIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKG-IKPNAHTYGAFINLYSKSG 570
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANIS 301
+ AER K++ + + Y LI + GN E ++ + + P+ +
Sbjct: 571 EIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIR--A 628
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I L A F ++ D+ + N +I + KEG +E A +L +
Sbjct: 629 YSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEML 688
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLA 388
G +PN + L NG KL
Sbjct: 689 HNGINPNIVVYNT-----LINGLCKLG 710
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 110/245 (44%), Gaps = 6/245 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N + Y +L+N CK KA L ++++E +L + +++++ Y K+G+ + +
Sbjct: 695 NIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLF 754
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EM + I PD Y Y + + ++ A + E ++ + + F++L + +
Sbjct: 755 DEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQ--KSVGSLSAFNSLIDSFCK 812
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTAN 299
G +A ++ ++ ++ Y LI YG+ + E +++ + R PNT
Sbjct: 813 HGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNT-- 870
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
++Y +++ + + FK+ E+ D VM AY KEG+ A +L +
Sbjct: 871 LTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNK 930
Query: 360 ARRRG 364
+ G
Sbjct: 931 SLVEG 935
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 110/277 (39%), Gaps = 8/277 (2%)
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + I+PD YTY ++A V D+ + V+ EM+++ + + T++ + G
Sbjct: 233 MVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKECK--PNLFTYNAFIGGLCQTG 290
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
++A K + + D Y L+ + + E I+ S+ + N +Y
Sbjct: 291 AVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYT 350
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I + ++ A + E + ++ N MIG AK G + A L
Sbjct: 351 ALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMA 410
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQE 423
G +P+ T+ + D YL++ DM A + L + K PS T +
Sbjct: 411 GLEPDTWTYNLLIDGYLKSHDMAKACELLAEM------KARKLTPSPFTYSVLISGLCHS 464
Query: 424 KDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 460
D+ A L+ + + V ++ LI+ Y R
Sbjct: 465 SDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESR 501
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/313 (20%), Positives = 123/313 (39%), Gaps = 36/313 (11%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY +++ K KA +L +M L + +N L+ Y K+ K ++
Sbjct: 380 NVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELL 439
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EMKA + P +TY+V + L +D+ A V+++M R+G V + + L YV+
Sbjct: 440 AEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNG-VKPNVFMYGTLIKAYVQ 498
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLI------------------------------ 271
+E A LK + DL Y LI
Sbjct: 499 ESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHT 558
Query: 272 -----TLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE 326
LY ++G + R ++ + + N+ Y +I+ ++ + A FK
Sbjct: 559 YGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCML 618
Query: 327 SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 386
DIR + +I + +K G+ + A + + + G P+ + + + GD++
Sbjct: 619 EKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIE 678
Query: 387 LAVDCLEKAIDTG 399
A ++ + G
Sbjct: 679 KASQLYDEMLHNG 691
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 120/276 (43%), Gaps = 6/276 (2%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y SL++ +CKE EKA L ++M + + + +N+L+ K G K + E++
Sbjct: 664 YNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIE 723
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
++PD TY+ + +++ A ++ +EM G ++ D + L + G
Sbjct: 724 EKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKG-ISPDGYIYCILIDGCGKEGNL 782
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYL 303
EKA E + ++ LSA+ LI + + G + E ++ + + PN ++Y
Sbjct: 783 EKALSLFHEAQQKSVG-SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNI--VTYT 839
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I + + AE+ F + E+ + ++ +Y + G L + R
Sbjct: 840 ILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEAR 899
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
G +A + + + Y + G A+ L K++ G
Sbjct: 900 GIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEG 935
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 135/320 (42%), Gaps = 8/320 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
NH TY L+NC+C+ A A+L KM +L + + +SL+ Y + + A++
Sbjct: 729 NHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALV 788
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+M + P++ T+N + L N S A +I+ M G D T+ + + +
Sbjct: 789 DQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG-CQPDLVTYGVVVNGLCK 847
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G + A L ++E + Y +I + ++ + +++ + ++
Sbjct: 848 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 907
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y ++I L N A + + D+ + +I A+ KEG+L AE+L +
Sbjct: 908 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 967
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
+R DP+ T+ + + + + A E + P T T ++ F
Sbjct: 968 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK------HCFPDVVTYNTLIKGFC 1021
Query: 422 QEKDV-DGAEGFLEILKKAV 440
+ K V +G E F E+ ++ +
Sbjct: 1022 KYKRVEEGMEVFREMSQRGL 1041
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 121/295 (41%), Gaps = 36/295 (12%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TYG ++N CK T+ A LL KM++ L + +N+++ K H + + +E
Sbjct: 836 VTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE 895
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ I P+ TY+ + L S A R++ +M + ++ D TFS L +V+ G
Sbjct: 896 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI-ERKINPDVFTFSALIDAFVKEG 954
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTAN-- 299
+AE+ E+ R+ + Y LI + L E +++ + + FP+
Sbjct: 955 KLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYN 1014
Query: 300 -------------------------------ISYLNMIQVLVNLKDLPGAEKCFKEWESG 328
++Y +IQ L D A++ FKE S
Sbjct: 1015 TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD 1074
Query: 329 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
+I N ++ K G+LE A + E +R +P T+ I + + G
Sbjct: 1075 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 1129
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 134/306 (43%), Gaps = 3/306 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNH--LTYGSLLN 131
A +L +M +R +N V + +D K + AE + ++ + S + +TY SL+N
Sbjct: 924 ASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN 983
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C ++A+ + E M + + +N+L+ + K E+ + +EM ++
Sbjct: 984 GFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 1043
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
++ TYN+ ++ L D A+ + +EM DG V + T++ L + G EKA
Sbjct: 1044 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG-VPPNIMTYNTLLDGLCKNGKLEKAMVV 1102
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
+ L+ + Y +I + G + + + ++ +L L ++Y MI
Sbjct: 1103 FEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCR 1162
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
A+ FKE + + N +I A ++G E + EL + R G +A T
Sbjct: 1163 KGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 1222
Query: 372 WEIFSD 377
+ ++
Sbjct: 1223 IGLVTN 1228
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/374 (20%), Positives = 145/374 (38%), Gaps = 40/374 (10%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +T SLLN YC +A AL+++M +++ FN+L+ + A+I
Sbjct: 764 NIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALI 823
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR--------------DGR--- 224
M A PD TY V + L D A ++ +M++ DG
Sbjct: 824 DRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKY 883
Query: 225 -----------------VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAY 267
+ + T+S+L S G + A R L ++ R + D+ +
Sbjct: 884 KHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTF 943
Query: 268 QFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES 327
LI + + G L E +++ + + + ++Y ++I L A++ F+ S
Sbjct: 944 SALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS 1003
Query: 328 GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKL 387
D+ N +I + K R+E E+ +RG N T+ I + GD +
Sbjct: 1004 KHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDM 1063
Query: 388 AVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEV 447
A + ++ + G P+ T T + + ++ A E L+++ + +
Sbjct: 1064 AQEIFKEMVSDG------VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 1117
Query: 448 FEPLIRTYAAAGRT 461
+ +I AG+
Sbjct: 1118 YNIMIEGMCKAGKV 1131
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/313 (20%), Positives = 127/313 (40%), Gaps = 3/313 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNH--LTYGSLLN 131
AL L + ME +G+ V + + + A D+ E N T+ +L++
Sbjct: 889 ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALID 948
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ KE +AE L ++M + ++ S + ++SL+ + ++ + + M + P
Sbjct: 949 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 1008
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D TYN ++ + V EM + G V + T++ L +AG + A+
Sbjct: 1009 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG-NTVTYNILIQGLFQAGDCDMAQEI 1067
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
KE+ + ++ Y L+ + G L + ++ L+ + +Y MI+ +
Sbjct: 1068 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 1127
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+ F D+ N MI + ++G E A+ L + + G PN+
Sbjct: 1128 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC 1187
Query: 372 WEIFSDYYLRNGD 384
+ LR+GD
Sbjct: 1188 YNTLIRARLRDGD 1200
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 114/268 (42%), Gaps = 1/268 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ +T GSL+N +C+ A +L++KM E+ + +N+++ KT
Sbjct: 257 DRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFF 316
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+E++ I P+ TY + L + S A R++ +M + ++ + T+S L +V+
Sbjct: 317 KEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK-KITPNVITYSALLDAFVK 375
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G +A+ +E+ + D+ Y LI + E +++ + +S
Sbjct: 376 NGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVS 435
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I K + K F+E + N +I + + G ++ A+E +
Sbjct: 436 YNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD 495
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAV 389
G P+ T+ I NG+++ A+
Sbjct: 496 FFGISPDIWTYNILLGGLCDNGELEKAL 523
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 77/168 (45%), Gaps = 1/168 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
++Y +L+N +CK E L +M + L +++ +N+L+ + + G +K +
Sbjct: 434 VSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 493
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M I PD +TYN+ + L ++ A + E+M++ + D T++ + + G
Sbjct: 494 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR-EMDLDIVTYTTVIRGMCKTG 552
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 291
E+A L + D+ Y +++ G L EV ++ ++
Sbjct: 553 KVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMK 600
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 169/444 (38%), Gaps = 73/444 (16%)
Query: 25 LYDRLFKKG--SSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENME 82
++D + KG + VS +N F K+K+ V D +K R+ M
Sbjct: 420 MFDLMVSKGCLADVVSYNTLINGFCKAKR------VEDGMKLFRE-------------MS 460
Query: 83 KRGMNKTVSDQAIHLDLVA---KVQGIDAAENYF--VDLPETSKNHLTYGSLLNCYCKEL 137
+RG+ VS+ + L+ + +D A+ +F +D S + TY LL C
Sbjct: 461 QRGL---VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNG 517
Query: 138 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 197
EKA + E M++ + + + +++ KTG E+ ++ + + PD TY
Sbjct: 518 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYT 577
Query: 198 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK------AERA 251
M L + E + +MK++G + D T I + A L +K A
Sbjct: 578 TMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSD--GDITLSAELIKKMLSCGYAPSL 635
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
LK++++ + LS L +G S YR S L
Sbjct: 636 LKDIKSGVCKKALS------LLRAFSGKTSYDYREKLSR----------------NGLSE 673
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
LK L A F E I + ++ A AK + + L E+ + G N T
Sbjct: 674 LK-LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 732
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG 431
+ I + + R + LA+ L K + G + P+ T+ + + + K + A
Sbjct: 733 YSILINCFCRRSQLPLALAVLGKMMKLG------YEPNIVTLSSLLNGYCHSKRISEAVA 786
Query: 432 FLEILKKAVDDLGVEVFEPLIRTY 455
VD + V ++P T+
Sbjct: 787 L-------VDQMFVTGYQPNTVTF 803
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 101/265 (38%), Gaps = 56/265 (21%)
Query: 23 EALYDRLFKKG--SSDVSVRQQLNQF-----LKSKKRVFKWEVG-----------DTLKK 64
E LYD + K+ S V+ +N F L K++F++ V +K
Sbjct: 960 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKG 1019
Query: 65 LRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKN 122
K +++ M +RG+ I + + + D A+ F ++ N
Sbjct: 1020 FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 1079
Query: 123 HLTYGSLLNCYCKELMTEKAEALLEKMKE------------------------------L 152
+TY +LL+ CK EKA + E ++
Sbjct: 1080 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 1139
Query: 153 NLGFSS-----MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVN 207
NL + +N++++ + + G E+ A+ +EMK +P+S YN +RA
Sbjct: 1140 NLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDG 1199
Query: 208 DISGAERVIEEMKRDGRVAADWTTF 232
D + +I+EM+ G A D +T
Sbjct: 1200 DREASAELIKEMRSCG-FAGDASTI 1223
>gi|297834714|ref|XP_002885239.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
gi|297331079|gb|EFH61498.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
Length = 1429
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 127/310 (40%), Gaps = 39/310 (12%)
Query: 117 PETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTG--HP 174
P Y +++ Y + KA+ LL+ M++ + FN+L+ K+G P
Sbjct: 219 PTVGDRVQVYNAMMGVYSRSGKFSKAQELLDAMRQRGCVPDLISFNTLINARLKSGGLTP 278
Query: 175 EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSN 234
+ ++ ++ S + PD+ TYN + A + +++ GA +V E+M+ R D T++
Sbjct: 279 NLVVELLDMVRNSGLRPDAITYNTLLSACSRDSNLEGAVKVFEDMEAH-RCQPDLWTYNA 337
Query: 235 LASIYVEAGLFEKAERALKELE--------------------NRNAH------------- 261
+ S+Y GL +AER ELE RN
Sbjct: 338 MISVYGRCGLAAEAERLFIELELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMG 397
Query: 262 --RDLSAYQFLITLYGQTGNLSEVYRIWRSLR-LAFPNTANISYLNMIQVLVNLKDLPGA 318
+D Y +I +YG+ G L ++++ ++ L+ N I+Y +I L A
Sbjct: 398 FGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRSVEA 457
Query: 319 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 378
E ++ + +I YAK G+ E AE+ R G P+ + + D
Sbjct: 458 AALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDV 517
Query: 379 YLRNGDMKLA 388
LR + + A
Sbjct: 518 LLRGNETRKA 527
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 121/271 (44%), Gaps = 4/271 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL--PETSKNHLTYGSLLN 131
A+K+ E+ME + + + + AE F++L S + +TY SLL
Sbjct: 316 AVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFIELELKGFSPDAVTYNSLLY 375
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKA-SSIM 190
+ +E TEK + + ++M+++ G M +N+++ +Y K G + + ++MK S
Sbjct: 376 AFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRN 435
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
PD+ TY V + +L N A ++ EM G + T+S L Y +AG E+AE
Sbjct: 436 PDAITYTVLIDSLGKANRSVEAAALMSEMLDVG-IKPTLQTYSALICGYAKAGKREEAED 494
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
+ D AY ++ + + + + ++R + ++ Y MI L+
Sbjct: 495 TFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWVLYRDMISDGHTPSHSLYELMILGLM 554
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMI 341
+K ++ E C + +++V++
Sbjct: 555 KENRSDDVQKTIRDMEELCGMNPLEISSVLV 585
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 84/429 (19%), Positives = 168/429 (39%), Gaps = 51/429 (11%)
Query: 99 LVAKVQGIDAAENYFVDLPETSK----NHLTYGSLLNCYCKELMTEKAEALLEKMKELNL 154
L KV I AA + ++ P Y +LL+C +A + +++
Sbjct: 653 LHCKVNNIGAALDEYLADPCVHGWCFGGSTMYETLLHCCVANEHYAEASQVFSELRLSGC 712
Query: 155 GFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSI-MPDSYTYNVWMRALAAVNDISGAE 213
S S++ +Y K G PE ++ + + S Y + A + AE
Sbjct: 713 EPSESVCKSMVVVYCKLGFPETAYQVVNQAETKGFHFACSPMYTDIIEAYGKLKLWQKAE 772
Query: 214 RVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER----------------------- 250
V+ +++ GR D T+++L S Y E G +E+A
Sbjct: 773 SVVGNLRQSGRT-PDLKTWNSLMSAYAECGCYERARAIFNTMMRDGPSPTVESINKLLHA 831
Query: 251 ------------ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
++EL++ S+ ++ + + GN+ EV +I+ S++ A
Sbjct: 832 LCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVNKIYSSMKAAGYLPT 891
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
Y MI++L K + AE E E ++ + N M+ Y + ++ +
Sbjct: 892 IRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTVIEDYKKTVQVYQ 951
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 418
R + G +P+ T+ Y R+ + +++ + G P +T ++ +
Sbjct: 952 RIKESGLEPDETTYNTLIIMYCRDRRPEEGYSLMQQMRNLGLD------PKLDTYKSLIS 1005
Query: 419 HFEQEKDVDGAEG-FLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPV--MLRRLKMEKVE 475
F ++K ++ AE F E+L K + L + +++ +G S +L+ +K +E
Sbjct: 1006 AFGKQKCLEQAEQLFEELLSKGL-KLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIE 1064
Query: 476 VSEASKKLL 484
+ A+ LL
Sbjct: 1065 PTLATMHLL 1073
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/251 (19%), Positives = 109/251 (43%), Gaps = 3/251 (1%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y ++ CK AE ++ +M+E N +NS++ +Y +K + Q +K
Sbjct: 895 YRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTVIEDYKKTVQVYQRIK 954
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
S + PD TYN + ++++M+ G + T+ +L S + +
Sbjct: 955 ESGLEPDETTYNTLIIMYCRDRRPEEGYSLMQQMRNLG-LDPKLDTYKSLISAFGKQKCL 1013
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
E+AE+ +EL ++ D S Y ++ + +G+ S+ ++ + ++ A ++ +++
Sbjct: 1014 EQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIE-PTLATMHL 1072
Query: 306 IQVLVNLKDLPG-AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+ V + P AEK ++ + +I AY + ++ E ++ G
Sbjct: 1073 LMVSYSSSGNPQEAEKVLSNLKNTEVELTTLPYSSVIDAYLRSKDYKSGIERLLEMKKEG 1132
Query: 365 ADPNAKTWEIF 375
+P+ + W F
Sbjct: 1133 LEPDHRIWTCF 1143
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 99/231 (42%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY ++++ Y + + +AE L +++ ++ +NSL+ +A+ + EK+ + Q+M
Sbjct: 334 TYNAMISVYGRCGLAAEAERLFIELELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQM 393
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ D TYN + + A ++ ++MK D T++ L +A
Sbjct: 394 QKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANR 453
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+A + E+ + L Y LI Y + G E + + + N++Y
Sbjct: 454 SVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSV 513
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEE 355
M+ VL+ + A +++ S T + +MI KE R ++ ++
Sbjct: 514 MLDVLLRGNETRKAWVLYRDMISDGHTPSHSLYELMILGLMKENRSDDVQK 564
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 1/150 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY +L+ YC++ E+ +L+++M+ L L + SL++ + K E+ + +E+
Sbjct: 964 TYNTLIIMYCRDRRPEEGYSLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEEL 1023
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ + D Y+ M+ S AE++++ MK G + T L Y +G
Sbjct: 1024 LSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAG-IEPTLATMHLLMVSYSSSGN 1082
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLY 274
++AE+ L L+N Y +I Y
Sbjct: 1083 PQEAEKVLSNLKNTEVELTTLPYSSVIDAY 1112
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 135/320 (42%), Gaps = 8/320 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
NH TY L+NC+C+ A A+L KM +L + + +SL+ Y + + A++
Sbjct: 115 NHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALV 174
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+M + P++ T+N + L N S A +I+ M G D T+ + + +
Sbjct: 175 DQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKG-CQPDLVTYGVVVNGLCK 233
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G + A L ++E + Y +I + ++ + +++ + ++
Sbjct: 234 RGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVT 293
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y ++I L N A + + D+ + +I A+ KEG+L AE+L +
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
+R DP+ T+ + + + + A E + P + T ++ F
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK------HCFPDVVSYSTLIKGFC 407
Query: 422 QEKDVD-GAEGFLEILKKAV 440
+ K VD G E F E+ ++ +
Sbjct: 408 KAKRVDEGMELFREMSQRGL 427
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 121/295 (41%), Gaps = 36/295 (12%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TYG ++N CK T+ A LL KM++ L + + +++ K H + + +E
Sbjct: 222 VTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKE 281
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ I P+ TY+ + L S A R++ +M + ++ D TFS L +V+ G
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI-ERKINPDVFTFSALIDAFVKEG 340
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTAN-- 299
+AE+ E+ R+ + Y LI + L E +++ + + FP+ +
Sbjct: 341 KLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYS 400
Query: 300 -------------------------------ISYLNMIQVLVNLKDLPGAEKCFKEWESG 328
++Y +IQ L D A++ FKE S
Sbjct: 401 TLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSD 460
Query: 329 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
+I N ++ K G+LE A + E +R +P T+ I + + G
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 515
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/313 (19%), Positives = 127/313 (40%), Gaps = 3/313 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNH--LTYGSLLN 131
AL L + ME +G+ V + + + A D+ E N T+ +L++
Sbjct: 275 ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALID 334
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ KE +AE L ++M + ++ S + ++SL+ + ++ + + M + P
Sbjct: 335 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 394
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D +Y+ ++ + + EM + G V + T++ L +AG + A+
Sbjct: 395 DVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVG-NTVTYTTLIQGLFQAGDCDMAQEI 453
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
KE+ + ++ Y L+ + G L + ++ L+ + +Y MI+ +
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+ F D+ N MI + ++G E A+ L + + G PN+
Sbjct: 514 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC 573
Query: 372 WEIFSDYYLRNGD 384
+ LR+GD
Sbjct: 574 YNTLIRARLRDGD 586
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 78/376 (20%), Positives = 147/376 (39%), Gaps = 44/376 (11%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLM-TLYAKTGHPEKIPAI 180
N +T SLLN YC +A AL+++M +++ FN+L+ L+ E + A+
Sbjct: 150 NIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAV-AL 208
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVND--------------------------ISG--- 211
I M A PD TY V + L D I G
Sbjct: 209 IDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCK 268
Query: 212 ------AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 265
A + +EM+ G + + T+S+L S G + A R L ++ R + D+
Sbjct: 269 NKHMDDALNLFKEMETKG-IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 327
Query: 266 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 325
+ LI + + G L E +++ + + + ++Y ++I L A++ F+
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 387
Query: 326 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 385
S D+ + +I + K R++ EL +RG N T+ + GD
Sbjct: 388 VSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDC 447
Query: 386 KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGV 445
+A + ++ + G P+ T T + + ++ A E L+++ + +
Sbjct: 448 DMAQEIFKEMVSDG------VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 501
Query: 446 EVFEPLIRTYAAAGRT 461
+ +I AG+
Sbjct: 502 YTYNIMIEGMCKAGKV 517
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 132/306 (43%), Gaps = 3/306 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNH--LTYGSLLN 131
A +L +M +R +N V + +D K + AE + ++ + S + +TY SL+N
Sbjct: 310 ASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN 369
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C ++A+ + E M + + +++L+ + K ++ + +EM ++
Sbjct: 370 GFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVG 429
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
++ TY ++ L D A+ + +EM DG V + T++ L + G EKA
Sbjct: 430 NTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDG-VPPNIMTYNTLLDGLCKNGKLEKAMVV 488
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
+ L+ + Y +I + G + + + ++ +L L ++Y MI
Sbjct: 489 FEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCR 548
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
A+ FKE + + N +I A ++G E + EL + R G +A T
Sbjct: 549 KGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 608
Query: 372 WEIFSD 377
+ ++
Sbjct: 609 IGLVTN 614
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 103/264 (39%), Gaps = 56/264 (21%)
Query: 23 EALYDRLFKKG--SSDVSVRQQLNQF-----LKSKKRVFKWEVG-----DTLKKLRDRKL 70
E LYD + K+ S V+ +N F L K++F++ V D + K
Sbjct: 346 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKG 405
Query: 71 YYPALKLSENME------KRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKN 122
+ A ++ E ME +RG+ + + + D A+ F ++ N
Sbjct: 406 FCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPN 465
Query: 123 HLTYGSLLNCYCKELMTEKAEALLEKMKE------------------------------L 152
+TY +LL+ CK EKA + E ++
Sbjct: 466 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 525
Query: 153 NLGFSS-----MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVN 207
NL + +N++++ + + G E+ A+ +EMK +P+S YN +RA
Sbjct: 526 NLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDG 585
Query: 208 DISGAERVIEEMKRDGRVAADWTT 231
D + +I+EM+ G A D +T
Sbjct: 586 DREASAELIKEMRSCG-FAGDAST 608
>gi|110289270|gb|ABG66143.1| expressed protein [Oryza sativa Japonica Group]
gi|125575153|gb|EAZ16437.1| hypothetical protein OsJ_31906 [Oryza sativa Japonica Group]
Length = 829
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 135/306 (44%), Gaps = 12/306 (3%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
T+ +L++ CK E+A L E++ + + + +NSL+ Y G ++IP IIQ M
Sbjct: 309 TFSTLIHGLCKVGSMEEALDLFERVTKEGMELEIVTYNSLINGYRLLGLTKEIPKIIQMM 368
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ + PD TY + + D+ +V +++ G + + T+S L + + G+
Sbjct: 369 RGQGVEPDLVTYTILIAGHCESGDVEEGMKVRKDVLDQG-LQLNIVTYSVLLNALFKKGM 427
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL---RLAFPNTANIS 301
F + + L E+ N D+ AY LI Y + G + + ++ ++ + P + N
Sbjct: 428 FCEIDNLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQVCNAMCSSQRVMPTSLN-- 485
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
+ +++ L L A + D+ NV+I YAK G + NA L ++
Sbjct: 486 HFSILLGLCKKGLLVEARWYLENVARKYQPTDVVFYNVVIDGYAKLGDIVNAVRLYDQIT 545
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
G P T Y + GD++LA + +AI +P++ T T M
Sbjct: 546 VAGMHPTIVTCNSLLYGYCKIGDLQLA-ESYFRAIQL-----SGLLPTAVTYTTLMDALS 599
Query: 422 QEKDVD 427
+ +V+
Sbjct: 600 EAGEVN 605
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/269 (18%), Positives = 111/269 (41%), Gaps = 9/269 (3%)
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
E N + +L N Y + M A +L KM LN+ S ++SL+ T +
Sbjct: 164 ECDSNGCVWDALANSYARAQMVHDALYVLSKMSSLNMQISVFTYDSLLHGLRMT---DVA 220
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
+ +EM++ + P Y++++ + L + + A ++E +++G+ TF+ L S
Sbjct: 221 LELFEEMESCGVSPSEYSHSIIINGLCKQDKVGEALSFLQEARKEGKFKPLGMTFNILMS 280
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
G + A+ L + D + LI + G++ E ++ +
Sbjct: 281 ALCNWGFVQSAKSFLCLMLKYGLVPDRYTFSTLIHGLCKVGSMEEALDLFERVTKEGMEL 340
Query: 298 ANISY---LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAE 354
++Y +N ++L K++P K + D+ ++I + + G +E
Sbjct: 341 EIVTYNSLINGYRLLGLTKEIP---KIIQMMRGQGVEPDLVTYTILIAGHCESGDVEEGM 397
Query: 355 ELKERARRRGADPNAKTWEIFSDYYLRNG 383
++++ +G N T+ + + + G
Sbjct: 398 KVRKDVLDQGLQLNIVTYSVLLNALFKKG 426
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 104/239 (43%), Gaps = 2/239 (0%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALL-EKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
S + ++ ++N CK+ +A + L E KE M FN LM+ G +
Sbjct: 232 VSPSEYSHSIIINGLCKQDKVGEALSFLQEARKEGKFKPLGMTFNILMSALCNWGFVQSA 291
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
+ + M ++PD YT++ + L V + A + E + ++G + + T+++L +
Sbjct: 292 KSFLCLMLKYGLVPDRYTFSTLIHGLCKVGSMEEALDLFERVTKEG-MELEIVTYNSLIN 350
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
Y GL ++ + ++ + + DL Y LI + ++G++ E ++ + +
Sbjct: 351 GYRLLGLTKEIPKIIQMMRGQGVEPDLVTYTILIAGHCESGDVEEGMKVRKDVLDQGLQL 410
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
++Y ++ L + E + D+ +++I Y K G +E A ++
Sbjct: 411 NIVTYSVLLNALFKKGMFCEIDNLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQV 469
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 64/339 (18%), Positives = 133/339 (39%), Gaps = 8/339 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY LLN K+ M + + LL ++ + L + ++ L+ Y K G EK +
Sbjct: 411 NIVTYSVLLNALFKKGMFCEIDNLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQVC 470
Query: 182 QEMKASS-IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
M +S +MP S + + L + A +E + R + D ++ + Y
Sbjct: 471 NAMCSSQRVMPTSLNHFSILLGLCKKGLLVEARWYLENVARKYQ-PTDVVFYNVVIDGYA 529
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
+ G A R ++ H + L+ Y + G+L +R+++L+ +
Sbjct: 530 KLGDIVNAVRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYFRAIQLSGLLPTAV 589
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
+Y ++ L ++ F E + + +V++ K+ R + A + +
Sbjct: 590 TYTTLMDALSEAGEVNTMLSLFDEMVAKRIKANAVTYSVIVKGLCKQLRFDEAINVLKDM 649
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 420
+G + + T+ + + ++++A + + G VP+ T +
Sbjct: 650 DSKGINADPITYNTLIQGFCESENVQMAFHIHDIMLCRG------LVPTPVTYNLLINVL 703
Query: 421 EQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
+ V AE LE L++ L + LI+ A G
Sbjct: 704 CLKGKVIQAEILLESLRENGIKLRKFAYTTLIKAQCAKG 742
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 76/165 (46%), Gaps = 11/165 (6%)
Query: 64 KLRDRKL---YYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL--PE 118
K+ D +L Y+ A++LS G+ T +D +++ ++ + F ++
Sbjct: 565 KIGDLQLAESYFRAIQLS------GLLPTAVTYTTLMDALSEAGEVNTMLSLFDEMVAKR 618
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
N +TY ++ CK+L ++A +L+ M + + +N+L+ + ++ + +
Sbjct: 619 IKANAVTYSVIVKGLCKQLRFDEAINVLKDMDSKGINADPITYNTLIQGFCESENVQMAF 678
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
I M ++P TYN+ + L + AE ++E ++ +G
Sbjct: 679 HIHDIMLCRGLVPTPVTYNLLINVLCLKGKVIQAEILLESLRENG 723
>gi|297823043|ref|XP_002879404.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325243|gb|EFH55663.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 111/251 (44%), Gaps = 1/251 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY L+ K E L ++M+E + + SL++ + G+ ++ +
Sbjct: 274 NKVTYTLLIELSVKNGKMNDVEKLFDEMRERGIESDIHVYTSLISWNCRKGNIKRAFLLF 333
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
E+ ++P S+TY + + V ++ AE ++ EM+ G V F+ L + Y
Sbjct: 334 DELTEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSKG-VNITQVVFNTLINGYCR 392
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G+ ++A +E + D+ + + + + E + + + +S
Sbjct: 393 KGMIDEASMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVRLSTVS 452
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y N+I V ++ A++ F E S + NVMI AY K+G+++ A +L +
Sbjct: 453 YTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEARKLWANMK 512
Query: 362 RRGADPNAKTW 372
G DP++ T+
Sbjct: 513 ANGMDPDSYTY 523
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 96/213 (45%), Gaps = 1/213 (0%)
Query: 169 AKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAAD 228
+ G EK +I+E I P++YTYN + A D SG E++++ MK+DG V +
Sbjct: 216 CRRGEVEKSKKLIKEFSGKGIKPEAYTYNTIINAYLKHRDFSGVEKILKVMKKDG-VVYN 274
Query: 229 WTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWR 288
T++ L + V+ G E+ E+ R D+ Y LI+ + GN+ + ++
Sbjct: 275 KVTYTLLIELSVKNGKMNDVEKLFDEMRERGIESDIHVYTSLISWNCRKGNIKRAFLLFD 334
Query: 289 SLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEG 348
L ++ +Y +I + + ++ AE E +S V N +I Y ++G
Sbjct: 335 ELTEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLINGYCRKG 394
Query: 349 RLENAEELKERARRRGADPNAKTWEIFSDYYLR 381
++ A + + ++G + T + + R
Sbjct: 395 MIDEASMIYDVMEKKGFQADVFTCNTIASCFNR 427
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 134/303 (44%), Gaps = 11/303 (3%)
Query: 76 KLSENMEKRGMNKTVSDQAIHLDLVA---KVQGIDAAENYFVDLPETS---KNHLTYGSL 129
KL + M +RG+ SD ++ L++ + I A F +L E +H TYG+L
Sbjct: 296 KLFDEMRERGIE---SDIHVYTSLISWNCRKGNIKRAFLLFDELTEKGLLPSSH-TYGAL 351
Query: 130 LNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
++ CK AE L+ +M+ + + + FN+L+ Y + G ++ I M+
Sbjct: 352 IDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLINGYCRKGMIDEASMIYDVMEKKGF 411
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
D +T N + A++ + M +G V +++NL +Y + G E+A+
Sbjct: 412 QADVFTCNTIASCFNRLKRYDEAKQWLFRM-MEGGVRLSTVSYTNLIDVYCKEGNVEEAK 470
Query: 250 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 309
R E+ ++ + Y +I Y + G + E ++W +++ + + +Y ++I
Sbjct: 471 RLFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEARKLWANMKANGMDPDSYTYTSLIHGE 530
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
++ A + F E + VMI +K G+ + A L + +R+G +
Sbjct: 531 CIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEIKRKGYTIDN 590
Query: 370 KTW 372
K +
Sbjct: 591 KVY 593
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 90/193 (46%), Gaps = 3/193 (1%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELM 138
MEK+G V +++ D A+ + + E + ++Y +L++ YCKE
Sbjct: 406 MEKKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVRLSTVSYTNLIDVYCKEGN 465
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
E+A+ L +M + +++ +N ++ Y K G ++ + MKA+ + PDSYTY
Sbjct: 466 VEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEARKLWANMKANGMDPDSYTYTS 525
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
+ +++ A R+ EM G + + T++ + S +AG ++A E++ +
Sbjct: 526 LIHGECIADNVDEAMRLFSEMGLKG-LDQNSVTYTVMISGLSKAGKSDEAFGLYDEIKRK 584
Query: 259 NAHRDLSAYQFLI 271
D Y LI
Sbjct: 585 GYTIDNKVYTALI 597
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/362 (19%), Positives = 146/362 (40%), Gaps = 44/362 (12%)
Query: 67 DRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTY 126
D ++ L++ + M K+G++ + L K + ID +F + ++ Y
Sbjct: 147 DNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEFFRRMVDSGVKITVY 206
Query: 127 G--SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
++ C+ EK++ L+++ + + +N+++ Y K + I++ M
Sbjct: 207 SLTIVVEGLCRRGEVEKSKKLIKEFSGKGIKPEAYTYNTIINAYLKHRDFSGVEKILKVM 266
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG- 243
K ++ + TY + + ++ E++ +EM+ G + +D +++L S G
Sbjct: 267 KKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEMRERG-IESDIHVYTSLISWNCRKGN 325
Query: 244 ------LFEK----------------------------AERALKELENRNAHRDLSAYQF 269
LF++ AE + E++++ + +
Sbjct: 326 IKRAFLLFDELTEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNT 385
Query: 270 LITLYGQTGNLSEVYRIWRSL-RLAFPNTANISYLNMIQVLVN-LKDLPGAEK-CFKEWE 326
LI Y + G + E I+ + + F A++ N I N LK A++ F+ E
Sbjct: 386 LINGYCRKGMIDEASMIYDVMEKKGFQ--ADVFTCNTIASCFNRLKRYDEAKQWLFRMME 443
Query: 327 SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 386
G + TN +I Y KEG +E A+ L + PNA T+ + Y + G +K
Sbjct: 444 GGVRLSTVSYTN-LIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGKVK 502
Query: 387 LA 388
A
Sbjct: 503 EA 504
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 65/159 (40%), Gaps = 6/159 (3%)
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
+Y +I + +D G EK K + Y+ ++I K G++ + E+L +
Sbjct: 242 TYNTIINAYLKHRDFSGVEKILKVMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEM 301
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 420
R RG + + + + R G++K A ++ + G +PSS T +
Sbjct: 302 RERGIESDIHVYTSLISWNCRKGNIKRAFLLFDELTEKG------LLPSSHTYGALIDGV 355
Query: 421 EQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
+ ++ AE + ++ ++ VF LI Y G
Sbjct: 356 CKVGEMGAAEILMNEMQSKGVNITQVVFNTLINGYCRKG 394
>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
chloroplastic-like [Glycine max]
Length = 556
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 159/362 (43%), Gaps = 9/362 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL--PETSKNHLTYGSLLN 131
A++L N+E+R + V I +D + K + + A N + ++ + N +TY +L+
Sbjct: 193 AIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIY 252
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C +A ALL +MK N+ F+ L+ K G + ++ M + + P
Sbjct: 253 GFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKP 312
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D TYN + VN++ A+ V M + G V +++ + + + ++A
Sbjct: 313 DVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSG-VTPGVQSYTIMIDGLCKTKMVDEAISL 371
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
+E++++N + + LI ++G ++ V+ + +R I+Y ++I L
Sbjct: 372 FEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCK 431
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
L A FK+ + D+ ++I K GRL+ A+E+ + +G + +T
Sbjct: 432 NCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRT 491
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG 431
+ + + + G A+ L K D G +P++ T + ++ + D AE
Sbjct: 492 YTVMISGFCKAGLFDEALALLSKMEDNG------CIPNAITFDIIICALFEKDENDKAEK 545
Query: 432 FL 433
L
Sbjct: 546 LL 547
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/344 (16%), Positives = 140/344 (40%), Gaps = 3/344 (0%)
Query: 56 WEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVD 115
++ + L L + + A+ LS++++ +G+ + I ++ + I + +
Sbjct: 70 FQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSVLAT 129
Query: 116 LPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGH 173
+ + + +T +L+ C +KA + + L + + +L+ K G
Sbjct: 130 ILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCKIGE 189
Query: 174 PEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFS 233
+ +++ ++ SI PD YN+ + +L + A + EM ++ + T++
Sbjct: 190 TKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAK-QIYPNVVTYT 248
Query: 234 NLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 293
L + G +A L E++ +N + D+ + LI G+ G + + + A
Sbjct: 249 TLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKA 308
Query: 294 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
+ ++Y +++ + ++ A+ F T ++ +MI K ++ A
Sbjct: 309 YVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEA 368
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
L E + + PN T+ D ++G + D ++K D
Sbjct: 369 ISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRD 412
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 110/279 (39%), Gaps = 1/279 (0%)
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
E + ++YG+L+N CK T+ A L+ ++E ++ + +N ++ K +
Sbjct: 169 EFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEA 228
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
+ EM A I P+ TY + + + A ++ EMK + D TFS L
Sbjct: 229 CNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKN-INPDVYTFSILID 287
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
+ G + A+ L + D+ Y L+ Y + ++ S+ +
Sbjct: 288 ALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTP 347
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
SY MI L K + A F+E + + N +I K GR+ +L
Sbjct: 348 GVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLV 407
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 396
++ R R + T+ D +N + A+ +K I
Sbjct: 408 DKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMI 446
>gi|297736068|emb|CBI24106.3| unnamed protein product [Vitis vinifera]
Length = 568
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/332 (19%), Positives = 149/332 (44%), Gaps = 10/332 (3%)
Query: 72 YPALKLSENMEKRGMNKTVSDQAIHLDLV---AKVQGIDAAENYFVDLPETS--KNHLTY 126
+ AL+ +M K+G+ + D A++ L+ A ++ + AE F + E ++ +
Sbjct: 200 FEALEFFRDMTKKGI---LEDSAVYSSLICSFASIREVKVAEELFREAEEKKILRDPEVF 256
Query: 127 GSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKA 186
L+ Y +E + E+ +++ MK + + S F +++ +AK + E+
Sbjct: 257 LKLVLMYVEEGLMERTIEIVKAMKNVKIRVSDCIFCAIVNGFAKKRGLRAAAKVYDELIL 316
Query: 187 SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE 246
P TY + + S AE + EM++ G +S++ +Y + G
Sbjct: 317 QGCEPGQVTYASIINVYCRMELYSKAEMMFSEMEKKG-FNKCVVAYSSMVVMYGKTGRLR 375
Query: 247 KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI 306
+A R + +++ R ++ Y L+ ++G+ NL +V ++W+ ++ +SY ++I
Sbjct: 376 EAMRLVAKMKERGCKPNVWVYNSLMDMHGRVKNLRQVEKLWKEMKRKKVVPDRVSYTSVI 435
Query: 307 QVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD 366
D + + E+ D + +M+G ++K GR++ +L + + G
Sbjct: 436 SAYSKAGDFETCMRFYHEFRMNGGVIDRVIAGIMVGIFSKSGRVDELVKLLQDMKTEGTG 495
Query: 367 PNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 398
+ + + + LR+ +++ L+++ DT
Sbjct: 496 LDERLYRSALN-ALRDAGLQMQARWLQESFDT 526
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 145/353 (41%), Gaps = 13/353 (3%)
Query: 56 WEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDL---VAKVQGIDAAENY 112
+ + + K+RD Y + L + E R ++ + I+ L + K+ A +
Sbjct: 149 YRIMEAYIKIRD---YEKVVTLFQEFESRKIDSSPFSTQIYRILCESLGKMGRAFEALEF 205
Query: 113 FVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAK 170
F D+ + ++ Y SL+ + + AE L + +E + F L+ +Y +
Sbjct: 206 FRDMTKKGILEDSAVYSSLICSFASIREVKVAEELFREAEEKKILRDPEVFLKLVLMYVE 265
Query: 171 TGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWT 230
G E+ I++ MK I + + A + A +V +E+ G
Sbjct: 266 EGLMERTIEIVKAMKNVKIRVSDCIFCAIVNGFAKKRGLRAAAKVYDELILQG-CEPGQV 324
Query: 231 TFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 290
T++++ ++Y L+ KAE E+E + ++ + AY ++ +YG+TG L E R+ +
Sbjct: 325 TYASIINVYCRMELYSKAEMMFSEMEKKGFNKCVVAYSSMVVMYGKTGRLREAMRLVAKM 384
Query: 291 --RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEG 348
R PN Y +++ + +K+L EK +KE + D +I AY+K G
Sbjct: 385 KERGCKPNVW--VYNSLMDMHGRVKNLRQVEKLWKEMKRKKVVPDRVSYTSVISAYSKAG 442
Query: 349 RLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRG 401
E R G + I + ++G + V L+ G G
Sbjct: 443 DFETCMRFYHEFRMNGGVIDRVIAGIMVGIFSKSGRVDELVKLLQDMKTEGTG 495
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/301 (20%), Positives = 113/301 (37%), Gaps = 39/301 (12%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
L S + Y K M A+ ++MK + +S + +M Y K EK+ + QE
Sbjct: 111 LVCNSAMGGYNKLHMFSSTIAVYDRMKSAGVVPNSESYYRIMEAYIKIRDYEKVVTLFQE 170
Query: 184 --------------------------------------MKASSIMPDSYTYNVWMRALAA 205
M I+ DS Y+ + + A+
Sbjct: 171 FESRKIDSSPFSTQIYRILCESLGKMGRAFEALEFFRDMTKKGILEDSAVYSSLICSFAS 230
Query: 206 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 265
+ ++ AE + E + + ++ D F L +YVE GL E+ +K ++N
Sbjct: 231 IREVKVAEELFREAE-EKKILRDPEVFLKLVLMYVEEGLMERTIEIVKAMKNVKIRVSDC 289
Query: 266 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 325
+ ++ + + L +++ L L ++Y ++I V ++ AE F E
Sbjct: 290 IFCAIVNGFAKKRGLRAAAKVYDELILQGCEPGQVTYASIINVYCRMELYSKAEMMFSEM 349
Query: 326 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 385
E + + M+ Y K GRL A L + + RG PN + D + R ++
Sbjct: 350 EKKGFNKCVVAYSSMVVMYGKTGRLREAMRLVAKMKERGCKPNVWVYNSLMDMHGRVKNL 409
Query: 386 K 386
+
Sbjct: 410 R 410
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 124/274 (45%), Gaps = 5/274 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TYG ++N CK + A LL KM+ + + FN+++ K H + +
Sbjct: 148 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 207
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+EM+ I P+ TY+ + L + S A +++ +M + ++ + TF+ L +V+
Sbjct: 208 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI-EKKINPNLVTFNALIDAFVK 266
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTAN 299
G F +AE+ ++ R+ D+ Y LI + L + +++ + + FP+
Sbjct: 267 EGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLD- 325
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+Y +I+ K + + F+E D +I +G +NA+++ ++
Sbjct: 326 -TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 384
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
G P+ T+ I D NG ++ A++ +
Sbjct: 385 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 418
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 123/302 (40%), Gaps = 5/302 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
A L ME + V +D + K + +D A N F ++ N +TY SL++
Sbjct: 168 AFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 227
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C C A LL M E + + + FN+L+ + K G + + +M SI P
Sbjct: 228 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDP 287
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
D +TYN + + + A+++ E M +D D T++ L + ++ E
Sbjct: 288 DIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD--CFPDLDTYNTLIKGFCKSKRVEDGTE 345
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
+E+ +R D Y LI G+ ++++ + ++Y ++ L
Sbjct: 346 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 405
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
N L A + F + DI + MI K G++++ +L +G PN
Sbjct: 406 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 465
Query: 371 TW 372
T+
Sbjct: 466 TY 467
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 101/238 (42%), Gaps = 1/238 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
TY SL+N +C +KA+ + E M + +N+L+ + K+ E + +E
Sbjct: 290 FTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFRE 349
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M ++ D+ TY ++ L D A++V ++M DG V D T+S L G
Sbjct: 350 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG-VPPDIMTYSILLDGLCNNG 408
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
EKA ++ D+ Y +I + G + + + ++ SL L ++Y
Sbjct: 409 KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYN 468
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
MI L + + L A K+ + D N +I A+ ++G + EL R
Sbjct: 469 TMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 526
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/319 (20%), Positives = 126/319 (39%), Gaps = 15/319 (4%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL L + ME +G+ V + + + A D+ E + N +T+ +L++
Sbjct: 203 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 262
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ KE +AE L + M + ++ +NSL+ + +K + + M + P
Sbjct: 263 AFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFP 322
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D TYN ++ + + EM G V D T++ L G + A++
Sbjct: 323 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG-DTVTYTTLIQGLFHDGDCDNAQKV 381
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
K++ + D+ Y L+ G L + ++ ++ + Y MI+ +
Sbjct: 382 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 441
Query: 312 LKDLPGAEKCFKEWESGCATY------DIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
A K W+ C+ ++ N MI + L+ A L ++ + G
Sbjct: 442 ------AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 495
Query: 366 DPNAKTWEIFSDYYLRNGD 384
P++ T+ +LR+GD
Sbjct: 496 LPDSGTYNTLIRAHLRDGD 514
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 137/334 (41%), Gaps = 16/334 (4%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLM-TLYAKTGHPEKIPAIIQ 182
+T SLLN YC A AL+++M E+ ++ F +L+ L+ E + A++
Sbjct: 80 VTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV-ALVD 138
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
M P+ TY V + L DI A ++ +M+ ++ AD F+ + +
Sbjct: 139 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEA-AKIEADVVIFNTIIDSLCKY 197
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY 302
+ A KE+E + ++ Y LI+ G S+ ++ + N +++
Sbjct: 198 RHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTF 257
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+I V AEK + DI N +I + RL+ A+++ E
Sbjct: 258 NALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVS 317
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ 422
+ P+ T+ + ++ ++ + + + RG V + T T ++
Sbjct: 318 KDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM--SHRG----LVGDTVTYTTLIQGLFH 371
Query: 423 EKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYA 456
+ D D A+ ++ K+ V D GV P I TY+
Sbjct: 372 DGDCDNAQ---KVFKQMVSD-GV---PPDIMTYS 398
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 62/124 (50%), Gaps = 2/124 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
AL++ + M+K + + ++ + K +D + F + L N +TY ++++
Sbjct: 413 ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 472
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C + + ++A ALL+KMKE S +N+L+ + + G +I+EM++ +
Sbjct: 473 GLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVG 532
Query: 192 DSYT 195
D+ T
Sbjct: 533 DAST 536
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 113/253 (44%), Gaps = 5/253 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N TYG+L+ CK E AE LL +M+ + + + FN+ M Y + G ++ +
Sbjct: 356 NAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQ 415
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M+ I D +TYN+ L ++ A+ ++ M G V + TF+ IY +
Sbjct: 416 AIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKG-VKPNVVTFTMFIEIYCK 474
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTAN 299
G +AER +++E + ++ Y LI Y + + + ++I + + P+
Sbjct: 475 EGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYT 534
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
S L + +V D A K F E T ++ MI +KEGR + A +L +
Sbjct: 535 YSSLIHGECIVGRVD--EALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFKLYDE 592
Query: 360 ARRRGADPNAKTW 372
+ G P+ + +
Sbjct: 593 MMKIGLIPDDRVF 605
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 114/250 (45%), Gaps = 5/250 (2%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY L+ Y E+AE + E+M+E N+ ++S+++ + G+ ++ A+ EM
Sbjct: 289 TYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEM 348
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
I+P+++TY + + + AE ++ EM+ G V + F+ Y G
Sbjct: 349 SQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKG-VDLNLVIFNTTMDGYCRRGK 407
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISY 302
++A R +E + + D+ Y L + E I S+ + PN +++
Sbjct: 408 MDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNV--VTF 465
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
I++ +L AE+ F++ E +I N +I AY K+ +++ A ++K
Sbjct: 466 TMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMIN 525
Query: 363 RGADPNAKTW 372
+G P+ T+
Sbjct: 526 KGLLPDLYTY 535
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 118/279 (42%), Gaps = 3/279 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N TY +LLN Y + + +L+ M++ + FS ++ L+ Y+ +G E+ I
Sbjct: 251 NVFTYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIF 310
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYV 240
+EM+ +I D Y Y+ + + ++ A + +EM +RD + + T+ L
Sbjct: 311 EEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRD--IVPNAHTYGALIGGVC 368
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
+AG E AE L E++++ +L + + Y + G + E R+ + N
Sbjct: 369 KAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVF 428
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
+Y + L L A+ ++ + I Y KEG L AE L
Sbjct: 429 TYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDM 488
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
++G PN T+ D Y + +K A + I+ G
Sbjct: 489 EKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKG 527
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 78/179 (43%), Gaps = 5/179 (2%)
Query: 71 YYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK--NHLTYGS 128
Y A + +M ++G+ V + +++ K + AE F D+ + + N +TY +
Sbjct: 443 YDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNT 502
Query: 129 LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS 188
L++ YCK+ ++A + +M L ++SL+ G ++ + EM+
Sbjct: 503 LIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKG 562
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY---VEAGL 244
I + TY + L+ A ++ +EM + G + D S + S + AGL
Sbjct: 563 ITRNVATYTSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLVGSFHKPLTHAGL 621
>gi|255661142|gb|ACU25740.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 426
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 120/280 (42%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 6 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 65
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S PD YN + A +I EM+ G V ++S L ++Y
Sbjct: 66 IFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAG-VTPTTASYSTLLTMY 124
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ +R
Sbjct: 125 VENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 245 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 284
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 109/221 (49%), Gaps = 20/221 (9%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML 276
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S + D Y + A ++ A+R++ E+KR + D I
Sbjct: 277 FQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAI-----HILA 331
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + +D++ ++ +I L Y + GN+ EV+ R L FP++
Sbjct: 332 GAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGY-FPDS 390
Query: 298 ANISYLNMIQVLVN----LKDLPGAEKCFKEW-ESGCATYD 333
N+I +++N L + A + E E GC D
Sbjct: 391 ------NVIALILNAYGKLHEFDKANDVYMEMQEVGCVFSD 425
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 83/200 (41%), Gaps = 4/200 (2%)
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
++ PD YTY+ + A +++M++D RV D +SNL + + + K
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 307
A L+ DL AY +I ++G+ E + +R A SY ++
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPTTASYSTLLT 122
Query: 308 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
+ V K A F E D+ N+MI Y + G + A++L R+ G +P
Sbjct: 123 MYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 182
Query: 368 NAKTWEIFSDYYLRNGDMKL 387
N ++ Y GD +L
Sbjct: 183 NVVSYNTLLRVY---GDAEL 199
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 90/397 (22%), Positives = 154/397 (38%), Gaps = 53/397 (13%)
Query: 97 LDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNL 154
L +AK++ D ++ +++ S N TY ++NC C+ A A+L KM +L
Sbjct: 72 LSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGY 131
Query: 155 GFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAER 214
G S + NSL+ + + A++ +M PD+ T+ + L N S A
Sbjct: 132 GPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVA 191
Query: 215 VIEEM--------------------KRD--------------GRVAADWTTFSNLASIYV 240
++E M KR G++ AD +S +
Sbjct: 192 LVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLC 251
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTA 298
+ + A E++N+ D+ Y LI+ G S+ R+ + R PN
Sbjct: 252 KYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNV- 310
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+++ ++I L AEK F E +I N +I + RL+ A+++
Sbjct: 311 -VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFT 369
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 418
+ P+ T+ + + + K VD +E D R V ++ T T +
Sbjct: 370 LMVSKDCLPDVVTYNTLINGFCK---AKKVVDGMELFRDMSR---RGLVGNTVTYTTLIH 423
Query: 419 HFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 455
F Q D D A+ + K+ V D GV P I TY
Sbjct: 424 GFFQASDCDNAQ---MVFKQMVSD-GV---HPNIMTY 453
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 98/426 (23%), Positives = 180/426 (42%), Gaps = 35/426 (8%)
Query: 24 ALYDRLFKKGSSDVSVRQQLNQFLKSK---KRVFKWEVGDTLKKLRDRKLYYPALKLSEN 80
A+ + L K+G D+++ LN+ K K V V D+L K R AL L
Sbjct: 210 AVINGLCKRGEPDLAL-NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVD---DALNLFTE 265
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELM 138
M+ +G+ V + + + A D+ E + N +T+ SL++ + KE
Sbjct: 266 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGK 325
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
+AE L ++M + ++ + + +NSL+ + ++ I M + +PD TYN
Sbjct: 326 LIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNT 385
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
+ + + +M R G V + T++ L + +A + A+ K++ +
Sbjct: 386 LINGFCKAKKVVDGMELFRDMSRRGLV-GNTVTYTTLIHGFFQASDCDNAQMVFKQMVSD 444
Query: 259 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 318
H ++ Y L+ + G L + ++ L+ + +I N++ + + A
Sbjct: 445 GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS-KMEPDIYTYNIMS-----EGMCKA 498
Query: 319 EKCFKEWESGCATY------DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
K W+ C+ D+ N MI + K+G E A L + + G P++ T+
Sbjct: 499 GKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTY 558
Query: 373 EIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDG--AE 430
+LR+GD K A L K + + R G S+ + T M H DG +
Sbjct: 559 NTLIRAHLRDGD-KAASAELIKEMRSCRFAGD---ASTYGLVTDMLH-------DGRLDK 607
Query: 431 GFLEIL 436
GFLE+L
Sbjct: 608 GFLEVL 613
>gi|334182559|ref|NP_001184987.1| PPR repeat-containing protein [Arabidopsis thaliana]
gi|332190929|gb|AEE29050.1| PPR repeat-containing protein [Arabidopsis thaliana]
Length = 798
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 96/475 (20%), Positives = 198/475 (41%), Gaps = 55/475 (11%)
Query: 43 LNQFLKSKKRVFKWE----VGDTLKKLRDR-KLYYPALKLSENMEKRGMNKTVSDQAIHL 97
L Q L+ + KWE V D L L R ++ +L + + M+ + +N VS Q+ +
Sbjct: 107 LEQLLQEEGTFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLN--VSTQSYN- 163
Query: 98 DLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFS 157
++ + D + + ++ + KN TY ++++ C++ E A L + ++G S
Sbjct: 164 SVLYHFRETDKMWDVYKEIKD--KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPS 221
Query: 158 SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIE 217
+ FNS+M+ Y K G + + + ++P Y++N+ + L V I+ A +
Sbjct: 222 VVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELAS 281
Query: 218 EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQT 277
+M + G V D T++ LA + G+ A ++++ ++ D+ Y L+ Q
Sbjct: 282 DMNKHG-VEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQL 340
Query: 278 GNLSEVYRIWRS-LRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 336
GN+ + + L F + I M+ L + A F + ++ + D+
Sbjct: 341 GNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVA 400
Query: 337 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKT------------------------- 371
+++I K G+ + A L + + PN++T
Sbjct: 401 YSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLI 460
Query: 372 ----------WEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
+ I D Y ++G ++ A++ + I+TG PS T + + +
Sbjct: 461 SSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETG------ITPSVATFNSLIYGYC 514
Query: 422 QEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPV--MLRRLKMEKV 474
+ +++ A L+++K V + L+ YA G T + + R +K E +
Sbjct: 515 KTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGI 569
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 187/436 (42%), Gaps = 27/436 (6%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAK----VQGIDAAENYFVDLPE--TSKNHLTYG 127
AL+L+ +M K G V ++ +++AK + I A D+ + S + +TY
Sbjct: 276 ALELASDMNKHG----VEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYT 331
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGF---SSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
LL C+ + LL+ M L+ GF S +P + +++ KTG ++ ++ +M
Sbjct: 332 ILLCGQCQLGNIDMGLVLLKDM--LSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQM 389
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
KA + PD Y++ + L + A + +EM D R+ + T L + G+
Sbjct: 390 KADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMC-DKRILPNSRTHGALLLGLCQKGM 448
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+A L L + D+ Y +I Y ++G + E +++ + + ++ +
Sbjct: 449 LLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNS 508
Query: 305 MIQVLVNLKDLPGAEKCFKEWE-SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I +++ A K + G A + T +M AYA G ++ +EL+ +
Sbjct: 509 LIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM-DAYANCGNTKSIDELRREMKAE 567
Query: 364 GADPNAKTWEIFSDYYLR-----NGDMKLAVDCLEKAIDTGRGDGGKWVPSSE-TIRTFM 417
G P T+ + R N + L EK R + +P + T T +
Sbjct: 568 GIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTII 627
Query: 418 RHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG--RTSPVMLRRLKMEKVE 475
++ + K + GA FLEI+K D + LI + G R + + L+ + V
Sbjct: 628 QYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVS 687
Query: 476 VSE-ASKKLLEAICVE 490
+S+ A L++A CV+
Sbjct: 688 LSKFAYTTLIKAHCVK 703
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 100/234 (42%), Gaps = 18/234 (7%)
Query: 59 GDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE 118
G L L + + A L +++ G + I +D AK I+ A F + E
Sbjct: 437 GALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIE 496
Query: 119 T--SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK 176
T + + T+ SL+ YCK +A +L+ +K L S + + +LM YA G+ +
Sbjct: 497 TGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKS 556
Query: 177 IPAIIQEMKASSIMPDSYTYNVWMRALA------AVNDISGAERVIEEMKRDGR------ 224
I + +EMKA I P + TY+V + L N + ER+ E+ K+ R
Sbjct: 557 IDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVL-RERIFEKCKQGLRDMESEG 615
Query: 225 VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI---TLYG 275
+ D T++ + A L+ +++RN + Y LI +YG
Sbjct: 616 IPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYG 669
>gi|255661214|gb|ACU25776.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 426
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 120/275 (43%), Gaps = 1/275 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 6 SPDRYTYSTLITHFGKEGLFDGALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 65
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I ++K S I PD YN + A +I EM+ G V + ++S L ++Y
Sbjct: 66 IFSKLKRSGITPDLVAYNSMINVFGKARLFREARSLISEMRVAG-VMPNTVSYSTLLTMY 124
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ E +++ +R
Sbjct: 125 VENKRFREALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRKMGIEPNV 184
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKDIVQNVVTYNTMMMIYGKTLEHEKANNLIQE 244
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
+ RG +PN+ T+ + + G + A +K
Sbjct: 245 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQK 279
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 109/221 (49%), Gaps = 20/221 (9%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY +++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 217 QNVVTYNTMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML 276
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q+++ S I D Y + A ++ A+R++ E+KR + D T LA
Sbjct: 277 FQKLRVSGIEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPNNIPRD-TAIHILAG--- 332
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + +D++ ++ +I+L Y + N+ EV+ R L FP++
Sbjct: 333 -AGRIEEATWVFRQAIDAGEVKDITVFERMISLFSKYKKYTNVVEVFEKMRGLGY-FPDS 390
Query: 298 ANISYLNMIQVLVN----LKDLPGAEKCFKEWES-GCATYD 333
N+I V++N L A + E + GC D
Sbjct: 391 ------NVIAVVLNAYGKLHKFENANGVYMEMQDEGCVFPD 425
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 126/296 (42%), Gaps = 13/296 (4%)
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
++ PD YTY+ + GA +++M++D RV D +SNL + + + K
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDGALSWLQKMEQD-RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNM 305
A +L+ DL AY +I ++G+ E + +R+A PNT +SY +
Sbjct: 63 AISIFSKLKRSGITPDLVAYNSMINVFGKARLFREARSLISEMRVAGVMPNT--VSYSTL 120
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
+ + V K A F E D+ N+MI Y + + A++L R+ G
Sbjct: 121 LTMYVENKRFREALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRKMGI 180
Query: 366 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKD 425
+PN ++ Y GD +L + + R D V + T T M + + +
Sbjct: 181 EPNVVSYNTLLRVY---GDAELFGEAIHLFRLMQRKD---IVQNVVTYNTMMMIYGKTLE 234
Query: 426 VDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT--SPVMLRRLKMEKVEVSEA 479
+ A ++ ++ + + +I + G+ + ++ ++L++ +E+ +
Sbjct: 235 HEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRVSGIEIDQV 290
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 135/320 (42%), Gaps = 8/320 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
NH TY L+NC+C+ A A+L KM +L + + +SL+ Y + + A++
Sbjct: 115 NHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALV 174
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+M + P++ T+N + L N S A +I+ M G D T+ + + +
Sbjct: 175 DQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG-CQPDLVTYGVVVNGLCK 233
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G + A L ++E + Y +I + ++ + +++ + ++
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y ++I L N A + + D+ + +I A+ KEG+L AE+L +
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
+R DP+ T+ + + + + A E + P T T ++ F
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK------HCFPDVVTYNTLIKGFC 407
Query: 422 QEKDV-DGAEGFLEILKKAV 440
+ K V +G E F E+ ++ +
Sbjct: 408 KYKRVEEGMEVFREMSQRGL 427
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 118/286 (41%), Gaps = 36/286 (12%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TYG ++N CK T+ A LL KM++ L + +N+++ K H + + +E
Sbjct: 222 VTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE 281
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ I P+ TY+ + L S A R++ +M + ++ D TFS L +V+ G
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI-ERKINPDVFTFSALIDAFVKEG 340
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTAN-- 299
+AE+ E+ R+ + Y LI + L E +++ + + FP+
Sbjct: 341 KLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYN 400
Query: 300 -------------------------------ISYLNMIQVLVNLKDLPGAEKCFKEWESG 328
++Y +IQ L D A++ FKE S
Sbjct: 401 TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD 460
Query: 329 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 374
+I N ++ K G+LE A + E +R +P T+ I
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 506
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 134/306 (43%), Gaps = 3/306 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNH--LTYGSLLN 131
A +L +M +R +N V + +D K + AE + ++ + S + +TY SL+N
Sbjct: 310 ASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN 369
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C ++A+ + E M + + +N+L+ + K E+ + +EM ++
Sbjct: 370 GFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 429
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
++ TYN+ ++ L D A+ + +EM DG V + T++ L + G EKA
Sbjct: 430 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG-VPPNIMTYNTLLDGLCKNGKLEKAMVV 488
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
+ L+ + Y +I + G + + + ++ +L L ++Y MI
Sbjct: 489 FEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCR 548
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
A+ FKE + + N +I A ++G E + EL + R G +A T
Sbjct: 549 KGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 608
Query: 372 WEIFSD 377
+ ++
Sbjct: 609 IGLVTN 614
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/374 (20%), Positives = 145/374 (38%), Gaps = 40/374 (10%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +T SLLN YC +A AL+++M +++ FN+L+ + A+I
Sbjct: 150 NIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALI 209
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR--------------DGR--- 224
M A PD TY V + L D A ++ +M++ DG
Sbjct: 210 DRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKY 269
Query: 225 -----------------VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAY 267
+ + T+S+L S G + A R L ++ R + D+ +
Sbjct: 270 KHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTF 329
Query: 268 QFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES 327
LI + + G L E +++ + + + ++Y ++I L A++ F+ S
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS 389
Query: 328 GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKL 387
D+ N +I + K R+E E+ +RG N T+ I + GD +
Sbjct: 390 KHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDM 449
Query: 388 AVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEV 447
A + ++ + G P+ T T + + ++ A E L+++ + +
Sbjct: 450 AQEIFKEMVSDG------VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 503
Query: 448 FEPLIRTYAAAGRT 461
+ +I AG+
Sbjct: 504 YNIMIEGMCKAGKV 517
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/313 (20%), Positives = 127/313 (40%), Gaps = 3/313 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNH--LTYGSLLN 131
AL L + ME +G+ V + + + A D+ E N T+ +L++
Sbjct: 275 ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALID 334
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ KE +AE L ++M + ++ S + ++SL+ + ++ + + M + P
Sbjct: 335 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 394
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D TYN ++ + V EM + G V + T++ L +AG + A+
Sbjct: 395 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG-NTVTYNILIQGLFQAGDCDMAQEI 453
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
KE+ + ++ Y L+ + G L + ++ L+ + +Y MI+ +
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+ F D+ N MI + ++G E A+ L + + G PN+
Sbjct: 514 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC 573
Query: 372 WEIFSDYYLRNGD 384
+ LR+GD
Sbjct: 574 YNTLIRARLRDGD 586
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 101/264 (38%), Gaps = 56/264 (21%)
Query: 23 EALYDRLFKKG--SSDVSVRQQLNQF-----LKSKKRVFKWEVG-----------DTLKK 64
E LYD + K+ S V+ +N F L K++F++ V +K
Sbjct: 346 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKG 405
Query: 65 LRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKN 122
K +++ M +RG+ I + + + D A+ F ++ N
Sbjct: 406 FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 465
Query: 123 HLTYGSLLNCYCKELMTEKAEALLEKMKE------------------------------L 152
+TY +LL+ CK EKA + E ++
Sbjct: 466 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 525
Query: 153 NLGFSS-----MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVN 207
NL + +N++++ + + G E+ A+ +EMK +P+S YN +RA
Sbjct: 526 NLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDG 585
Query: 208 DISGAERVIEEMKRDGRVAADWTT 231
D + +I+EM+ G A D +T
Sbjct: 586 DREASAELIKEMRSCG-FAGDAST 608
>gi|410110089|gb|AFV61124.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
macropoda]
Length = 427
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 120/280 (42%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 13 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 72
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S PD YN + A +I EMK G V + ++S L ++Y
Sbjct: 73 IFSRLKKSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAG-VMPNTXSYSTLLTMY 131
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ +R
Sbjct: 132 VENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 191
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M Y K E A L +
Sbjct: 192 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMXMIYGKTLEHEKANNLIQE 251
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 252 MQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 291
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 90/211 (42%), Gaps = 8/211 (3%)
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+ EM+ ++ PD YTY+ + A +++M++D RV D +SNL +
Sbjct: 2 GLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIEL 60
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPN 296
+ + KA L+ DL AY +I ++G+ E + ++ A PN
Sbjct: 61 SRKLCDYSKAISIFSRLKKSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPN 120
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
T SY ++ + V K A F E D+ N+MI Y + G + A++L
Sbjct: 121 TX--SYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 178
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDMKL 387
R+ G +PN ++ Y GD +L
Sbjct: 179 FWGMRKMGIEPNVVSYNTLLRVY---GDAEL 206
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 95/184 (51%), Gaps = 9/184 (4%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S+ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 224 QNVVTYNSMXMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAML 283
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q++++S I D + + A ++ A+R++ E+KR + D T LA
Sbjct: 284 FQKLRSSGIEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD-TAIHILAG--- 339
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + +D++ ++ +I L Y + N+ EV+ R L FP++
Sbjct: 340 -AGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGY-FPDS 397
Query: 298 ANIS 301
I+
Sbjct: 398 DVIA 401
>gi|410110077|gb|AFV61118.1| pentatricopeptide repeat-containing protein 123, partial
[Coelocarpum swinglei]
Length = 440
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 122/280 (43%), Gaps = 1/280 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+ + KE + + A + L+KM++ + + +++L+ L K K +
Sbjct: 12 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 71
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
I +K S PD YN + A +I EM+ G V + +++S L ++Y
Sbjct: 72 IFSRLKRSGFTPDLVAYNAMINVFGKAKLFRDARSLISEMRTAG-VMPNASSYSALLTMY 130
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
VE F +A E+ DL+ +I +YGQ G E +++ +R
Sbjct: 131 VENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 190
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+SY +++V + + A F+ + ++ N M+ Y K E A L +
Sbjct: 191 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 250
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ RG +PN+ T+ + + G + A +K +G
Sbjct: 251 MQNRGIEPNSITYSTIISIWGKIGKLDRAAMLFQKLRTSG 290
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 90/211 (42%), Gaps = 8/211 (3%)
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+ EM+ ++ PD YTY+ + A +++M++D RV D +SNL +
Sbjct: 1 GLFDEMREKALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIEL 59
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPN 296
+ + KA L+ DL AY +I ++G+ + + +R A PN
Sbjct: 60 SRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFRDARSLISEMRTAGVMPN 119
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
+ SY ++ + V K A F E D+ N+MI Y + G + A++L
Sbjct: 120 AS--SYSALLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 177
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDMKL 387
R+ G +PN ++ Y GD +L
Sbjct: 178 FWGMRKMGIEPNVVSYNTLLRVY---GDAEL 205
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 109/221 (49%), Gaps = 20/221 (9%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
+N +TY S++ Y K L EKA L+++M+ + +S+ ++++++++ K G ++ +
Sbjct: 223 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKIGKLDRAAML 282
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
Q+++ S + D + + A ++ A+R++ E+KR + D T LA
Sbjct: 283 FQKLRTSGVEIDQILFQTMIXAYERAGLVAHAKRLLHELKRPDNIPRD-TAIHILAG--- 338
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNT 297
AG E+A ++ + +D++ ++ +I L Y + N+ EV+ L FP++
Sbjct: 339 -AGRIEEATYVFRQAIDAGEVKDITVFERMIHLFSKYKKYANVVEVFDKMYGLGY-FPDS 396
Query: 298 ANISYLNMIQVLVN----LKDLPGAEKCFKEWES-GCATYD 333
N+I +++N L + A + + E + GC D
Sbjct: 397 ------NVIALVLNAYGKLHEFDKANEVYMEMQDVGCVFSD 431
>gi|297610666|ref|NP_001064867.2| Os10g0479200 [Oryza sativa Japonica Group]
gi|255679497|dbj|BAF26781.2| Os10g0479200 [Oryza sativa Japonica Group]
Length = 818
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 133/306 (43%), Gaps = 12/306 (3%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
T+ +L++ CK E+A L E++ + + + +NSL+ Y G ++IP IIQ M
Sbjct: 291 TFSTLIHGLCKVGSMEEALDLFERVTKEGMELEIVTYNSLINGYRLLGLTKEIPKIIQMM 350
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ + PD TY + + D+ +V +++ G + + T+S L + + G+
Sbjct: 351 RGQGVEPDLVTYTILIAGHCESGDVEEGMKVRKDVLDQG-LQLNIVTYSVLLNALFKKGM 409
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL---RLAFPNTANIS 301
F + + L E+ N D+ AY LI Y + G + + ++ ++ + P + N
Sbjct: 410 FCEIDNLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQVCNAMCSSQRVMPTSLN-- 467
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
+ +++ L L A + D+ NV+I YAK G + NA L ++
Sbjct: 468 HFSILLGLCKKGLLVEARWYLENVARKYQPTDVVFYNVVIDGYAKLGDIVNAVRLYDQIT 527
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
G P T Y + GD++LA +G +P++ T T M
Sbjct: 528 VAGMHPTIVTCNSLLYGYCKIGDLQLAESYFRAIQLSG------LLPTAVTYTTLMDALS 581
Query: 422 QEKDVD 427
+ +V+
Sbjct: 582 EAGEVN 587
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/269 (18%), Positives = 111/269 (41%), Gaps = 9/269 (3%)
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
E N + +L N Y + M A +L KM LN+ S ++SL+ T +
Sbjct: 146 ECDSNGCVWDALANSYARAQMVHDALYVLSKMSSLNMQISVFTYDSLLHGLRMT---DVA 202
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
+ +EM++ + P Y++++ + L + + A ++E +++G+ TF+ L S
Sbjct: 203 LELFEEMESCGVSPSEYSHSIIINGLCKQDKVGEALSFLQEARKEGKFKPLGMTFNILMS 262
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
G + A+ L + D + LI + G++ E ++ +
Sbjct: 263 ALCNWGFVQSAKSFLCLMLKYGLVPDRYTFSTLIHGLCKVGSMEEALDLFERVTKEGMEL 322
Query: 298 ANISY---LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAE 354
++Y +N ++L K++P K + D+ ++I + + G +E
Sbjct: 323 EIVTYNSLINGYRLLGLTKEIP---KIIQMMRGQGVEPDLVTYTILIAGHCESGDVEEGM 379
Query: 355 ELKERARRRGADPNAKTWEIFSDYYLRNG 383
++++ +G N T+ + + + G
Sbjct: 380 KVRKDVLDQGLQLNIVTYSVLLNALFKKG 408
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 104/239 (43%), Gaps = 2/239 (0%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALL-EKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
S + ++ ++N CK+ +A + L E KE M FN LM+ G +
Sbjct: 214 VSPSEYSHSIIINGLCKQDKVGEALSFLQEARKEGKFKPLGMTFNILMSALCNWGFVQSA 273
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
+ + M ++PD YT++ + L V + A + E + ++G + + T+++L +
Sbjct: 274 KSFLCLMLKYGLVPDRYTFSTLIHGLCKVGSMEEALDLFERVTKEG-MELEIVTYNSLIN 332
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
Y GL ++ + ++ + + DL Y LI + ++G++ E ++ + +
Sbjct: 333 GYRLLGLTKEIPKIIQMMRGQGVEPDLVTYTILIAGHCESGDVEEGMKVRKDVLDQGLQL 392
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
++Y ++ L + E + D+ +++I Y K G +E A ++
Sbjct: 393 NIVTYSVLLNALFKKGMFCEIDNLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQV 451
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 64/339 (18%), Positives = 133/339 (39%), Gaps = 8/339 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY LLN K+ M + + LL ++ + L + ++ L+ Y K G EK +
Sbjct: 393 NIVTYSVLLNALFKKGMFCEIDNLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQVC 452
Query: 182 QEMKASS-IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
M +S +MP S + + L + A +E + R + D ++ + Y
Sbjct: 453 NAMCSSQRVMPTSLNHFSILLGLCKKGLLVEARWYLENVARKYQ-PTDVVFYNVVIDGYA 511
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
+ G A R ++ H + L+ Y + G+L +R+++L+ +
Sbjct: 512 KLGDIVNAVRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYFRAIQLSGLLPTAV 571
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
+Y ++ L ++ F E + + +V++ K+ R + A + +
Sbjct: 572 TYTTLMDALSEAGEVNTMLSLFDEMVAKRIKANAVTYSVIVKGLCKQLRFDEAINVLKDM 631
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 420
+G + + T+ + + ++++A + + G VP+ T +
Sbjct: 632 DSKGINADPITYNTLIQGFCESENVQMAFHIHDIMLCRG------LVPTPVTYNLLINVL 685
Query: 421 EQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
+ V AE LE L++ L + LI+ A G
Sbjct: 686 CLKGKVIQAEILLESLRENGIKLRKFAYTTLIKAQCAKG 724
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 76/165 (46%), Gaps = 11/165 (6%)
Query: 64 KLRDRKL---YYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL--PE 118
K+ D +L Y+ A++LS G+ T +D +++ ++ + F ++
Sbjct: 547 KIGDLQLAESYFRAIQLS------GLLPTAVTYTTLMDALSEAGEVNTMLSLFDEMVAKR 600
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
N +TY ++ CK+L ++A +L+ M + + +N+L+ + ++ + +
Sbjct: 601 IKANAVTYSVIVKGLCKQLRFDEAINVLKDMDSKGINADPITYNTLIQGFCESENVQMAF 660
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
I M ++P TYN+ + L + AE ++E ++ +G
Sbjct: 661 HIHDIMLCRGLVPTPVTYNLLINVLCLKGKVIQAEILLESLRENG 705
>gi|255557937|ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540761|gb|EEF42321.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1429
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 125/307 (40%), Gaps = 39/307 (12%)
Query: 113 FVDLPETSKNHL-TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKT 171
F+ T N + Y +++ Y + K + +L+ M+E + FN+L+ K
Sbjct: 199 FIRAESTVDNTVQVYNAMMGVYARTGRFNKVQGMLDLMRERGCEPDLVSFNTLINARLKA 258
Query: 172 G--HPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADW 229
G P ++ E++ S + PD TYN + A + +++ A +V ++M+ D
Sbjct: 259 GAMTPNVAIELLNEVRRSGLRPDIITYNTLISACSRESNLEEAVKVFDDMEAH-YCQPDL 317
Query: 230 TTFSNLASIYVEAGLFEKAERALKELENRNAH---------------------------- 261
T++ + S+Y G KAE+ KELE++
Sbjct: 318 WTYNAMISVYGRCGFSGKAEQLFKELESKGYFPDAVTYNSLLYAFAREGNVDKVKEICNE 377
Query: 262 -------RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 314
RD Y +I +YG+ G +++R ++L+ I+Y +I L
Sbjct: 378 MVQMGFIRDEMTYNTIIHMYGKQGQHGLALQLYRDMKLSGRTPDAITYTVLIDSLGKANK 437
Query: 315 LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 374
+ A E + +R + +I YA+ G+ AEE + RR G P+ + +
Sbjct: 438 MVEAANVMSEMLNIGVKPTLRTYSALICGYARAGQRLEAEETFDCMRRSGIRPDQLAYSV 497
Query: 375 FSDYYLR 381
D +LR
Sbjct: 498 MLDVFLR 504
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 121/300 (40%), Gaps = 53/300 (17%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM--RALAAVNDISGAERVIEE 218
+N++M +YA+TG K+ ++ M+ PD ++N + R A + A ++ E
Sbjct: 213 YNAMMGVYARTGRFNKVQGMLDLMRERGCEPDLVSFNTLINARLKAGAMTPNVAIELLNE 272
Query: 219 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 278
++R G + D T++ L S E+A + ++E DL Y +I++YG+ G
Sbjct: 273 VRRSG-LRPDIITYNTLISACSRESNLEEAVKVFDDMEAHYCQPDLWTYNAMISVYGRCG 331
Query: 279 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 338
+ AE+ FKE ES D N
Sbjct: 332 FSGK-----------------------------------AEQLFKELESKGYFPDAVTYN 356
Query: 339 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 398
++ A+A+EG ++ +E+ + G + T+ Y + G LA+ +
Sbjct: 357 SLLYAFAREGNVDKVKEICNEMVQMGFIRDEMTYNTIIHMYGKQGQHGLALQLYRDMKLS 416
Query: 399 GRGDGGKWVPSSETIRTFMRHF-EQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAA 457
GR P + T + + K V+ A E+L ++GV +P +RTY+A
Sbjct: 417 GR------TPDAITYTVLIDSLGKANKMVEAANVMSEML-----NIGV---KPTLRTYSA 462
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 127/304 (41%), Gaps = 9/304 (2%)
Query: 77 LSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS---KNHLTYGSLLNCY 133
+++ ++ G + S + LD A+V I A+ + + HL Y ++
Sbjct: 827 VTQEIQDMGFQISKSSILLILDAFARVSNIAEAKKIYQGMKAAGYFPTMHL-YRIMIGLL 885
Query: 134 CKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDS 193
CK EA++ +M+E +NS++ LY K I Q +K + PD
Sbjct: 886 CKGKRVRDVEAMVTEMEEAGFRPDLSIWNSMLRLYTGIDDFRKTVQIYQRIKEDGLQPDE 945
Query: 194 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 253
TYN + + ++ EM+R G + T+ +L + + + L AE +
Sbjct: 946 DTYNTLIVMYCRDHRPEEGCSLMHEMRRIG-LEPKLDTYKSLIAAFGKQQLVVDAEELFE 1004
Query: 254 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLK 313
EL ++ + D S Y ++ +Y +GN S+ ++ ++ A I+ ++++ V
Sbjct: 1005 ELLSKGSKLDRSFYHIMMKIYRNSGNHSKAEKLLSMMKDAGVE-PTIATMHLLMVSYGSS 1063
Query: 314 DLPG-AEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
P AEK E G + + ++V I AY K + ++ G +P+ +
Sbjct: 1064 GQPQEAEKVLTNLKEMGLSLSTLPYSSV-IDAYLKNKDYSVGIQKLVEMKKEGLEPDHRI 1122
Query: 372 WEIF 375
W F
Sbjct: 1123 WTCF 1126
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 80/389 (20%), Positives = 153/389 (39%), Gaps = 54/389 (13%)
Query: 105 GIDAAENYFVDLPETSKNHLTYGSL----LNCYCKELMTEKAEALLEKMKELNLGFSSMP 160
G +Y +DL E S+ + Y K + +KAE+L+ +++
Sbjct: 713 GFPETAHYLIDLAEIEGMPFDKISIDVAVIETYGKLKLWQKAESLVGNLRQRCTNVDRKV 772
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
+N+L+ YA +G E+ A+ M P V+ I+G +++ +
Sbjct: 773 WNALIQAYAASGCYEQARAVFNTMMRDGPSP-------------TVDSING---LLQALI 816
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
DGR L +YV +E+++ S+ ++ + + N+
Sbjct: 817 VDGR----------LEELYV----------VTQEIQDMGFQISKSSILLILDAFARVSNI 856
Query: 281 SEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 338
+E +I++ ++ A FP T ++ Y MI +L K + E E E D+ + N
Sbjct: 857 AEAKKIYQGMKAAGYFP-TMHL-YRIMIGLLCKGKRVRDVEAMVTEMEEAGFRPDLSIWN 914
Query: 339 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 398
M+ Y ++ +R + G P+ T+ Y R+ + + +
Sbjct: 915 SMLRLYTGIDDFRKTVQIYQRIKEDGLQPDEDTYNTLIVMYCRDHRPEEGCSLMHEMRRI 974
Query: 399 GRGDGGKWVPSSETIRTFMRHF-EQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAA 457
G P +T ++ + F +Q+ VD E F E+L K L + +++ Y
Sbjct: 975 G------LEPKLDTYKSLIAAFGKQQLVVDAEELFEELLSKG-SKLDRSFYHIMMKIYRN 1027
Query: 458 AGRTSPV--MLRRLKMEKVEVSEASKKLL 484
+G S +L +K VE + A+ LL
Sbjct: 1028 SGNHSKAEKLLSMMKDAGVEPTIATMHLL 1056
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 93/233 (39%), Gaps = 3/233 (1%)
Query: 153 NLGFSSMPFNSLMTL--YAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDIS 210
++GF + L+ L +A+ + + I Q MKA+ P + Y + + L +
Sbjct: 833 DMGFQISKSSILLILDAFARVSNIAEAKKIYQGMKAAGYFPTMHLYRIMIGLLCKGKRVR 892
Query: 211 GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 270
E ++ EM+ G D + ++++ +Y F K + + ++ D Y L
Sbjct: 893 DVEAMVTEMEEAG-FRPDLSIWNSMLRLYTGIDDFRKTVQIYQRIKEDGLQPDEDTYNTL 951
Query: 271 ITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCA 330
I +Y + E + +R +Y ++I + + AE+ F+E S +
Sbjct: 952 IVMYCRDHRPEEGCSLMHEMRRIGLEPKLDTYKSLIAAFGKQQLVVDAEELFEELLSKGS 1011
Query: 331 TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
D ++M+ Y G AE+L + G +P T + Y +G
Sbjct: 1012 KLDRSFYHIMMKIYRNSGNHSKAEKLLSMMKDAGVEPTIATMHLLMVSYGSSG 1064
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 15/126 (11%)
Query: 334 IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM--KLAVDC 391
++V N M+G YA+ GR + + + R RG +P+ ++ + L+ G M +A++
Sbjct: 210 VQVYNAMMGVYARTGRFNKVQGMLDLMRERGCEPDLVSFNTLINARLKAGAMTPNVAIEL 269
Query: 392 LEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPL 451
L + +G P T T + +E +++ A K DD+ +P
Sbjct: 270 LNEVRRSG------LRPDIITYNTLISACSRESNLEEA-------VKVFDDMEAHYCQPD 316
Query: 452 IRTYAA 457
+ TY A
Sbjct: 317 LWTYNA 322
Score = 38.5 bits (88), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 75/182 (41%), Gaps = 7/182 (3%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS-KNHL-TYGSLLN 131
AL+L +M+ G + +D + K + A N ++ K L TY +L+
Sbjct: 406 ALQLYRDMKLSGRTPDAITYTVLIDSLGKANKMVEAANVMSEMLNIGVKPTLRTYSALIC 465
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
Y + +AE + M+ + + ++ ++ ++ + K + +EM I P
Sbjct: 466 GYARAGQRLEAEETFDCMRRSGIRPDQLAYSVMLDVFLRFDEATKAMMLYREMVRDGITP 525
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D Y +R L N + +R+I +M+ + +ASI V+ +E A
Sbjct: 526 DPTVYGAMLRNLGRENKVEDIQRIIRDMEEVCGMNP-----QAIASILVKGECYEDAAGM 580
Query: 252 LK 253
L+
Sbjct: 581 LR 582
>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
Length = 761
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 130/306 (42%), Gaps = 12/306 (3%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + +TY S++ CK +KA +L M + + + + S+M Y +G P++
Sbjct: 228 SPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIG 287
Query: 180 IIQEMKASSIMPDSY-----TYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSN 234
++++++ + PD TY ++ A + G +++ M R+G + D ++
Sbjct: 288 FLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNG-IHPDHYVYNI 346
Query: 235 LASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF 294
L Y + G ++A ++ + + D Y +I + ++G + + + +
Sbjct: 347 LICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 406
Query: 295 PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAE 354
+ NI Y ++I L AE+ E + N +I ++ KEGR+ +E
Sbjct: 407 LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 466
Query: 355 ELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIR 414
+L + R G P+ T+ D Y G M A+ L + G P++ T R
Sbjct: 467 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVG------LKPNTVTYR 520
Query: 415 TFMRHF 420
T + +
Sbjct: 521 TLINGY 526
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 105/261 (40%), Gaps = 1/261 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+H Y L+ Y K+ ++A + KM++ L ++ + +++ + K+G E
Sbjct: 340 DHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYF 399
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
++M + P + YN + L N AE +I EM G + + F+++ + +
Sbjct: 400 EQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG-ICLNTIFFNSIIDSHCK 458
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G ++E+ + D+ Y LI Y G + E ++ + ++
Sbjct: 459 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVT 518
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I + + A FKE ES + DI N+++ + R A+EL R
Sbjct: 519 YRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRIT 578
Query: 362 RRGADPNAKTWEIFSDYYLRN 382
G T+ I +N
Sbjct: 579 ESGTQIELSTYNIILHGLCKN 599
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 143/366 (39%), Gaps = 35/366 (9%)
Query: 63 KKLRDRKLYYPALKLS--ENMEKRGMNK---TVSDQAIHLDLVAKVQGIDAAENYFVDLP 117
+ L D + PA +S M + G K TV AI + + +D F L
Sbjct: 55 RALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRADRLDLG---FAALG 111
Query: 118 ETSKNH-----LTYGSLLNCYCKELMTEKA-EALLEKMKELNLGFSSMP--FNSLMTLYA 169
K +T+ LL C + T A + +L +M EL S MP F+ + L
Sbjct: 112 NVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTEL----SCMPDVFSCTILLKG 167
Query: 170 -----KTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGR 224
++ ++P ++ + + PD +Y + D A EM D R
Sbjct: 168 LCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEM-LDRR 226
Query: 225 VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVY 284
++ D T+S++ + + +KA L + + Y ++ Y +G E
Sbjct: 227 ISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAI 286
Query: 285 RIWRSLRLAF-------PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVT 337
+ +R P+ A +Y ++Q L G D V
Sbjct: 287 GFLKKVRSDGVEPDGLEPDIA--TYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVY 344
Query: 338 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
N++I AYAK+G+++ A + + R++G +P+A T+ ++G ++ A+ E+ ID
Sbjct: 345 NILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMID 404
Query: 398 TGRGDG 403
G G
Sbjct: 405 EGLSPG 410
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/312 (19%), Positives = 127/312 (40%), Gaps = 3/312 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A+ + M ++G+N + ++ K ++ A YF + + S ++ Y SL++
Sbjct: 360 AMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIH 419
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C E+AE L+ +M + + +++ FNS++ + K G + + M + P
Sbjct: 420 GLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 479
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D TY+ + + A +++ M G + + T+ L + Y + A
Sbjct: 480 DIITYSTLIDGYCLAGKMDEAMKLLSGMVSVG-LKPNTVTYRTLINGYCKISRMGDALVL 538
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
KE+E+ D+ Y ++ QT + ++ + + +Y ++ L
Sbjct: 539 FKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCK 598
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
K A + F+ + R N+MI A K GR A++L G PN T
Sbjct: 599 NKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWT 658
Query: 372 WEIFSDYYLRNG 383
+ + ++ + G
Sbjct: 659 YRLMAENIIGQG 670
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 49/258 (18%), Positives = 104/258 (40%), Gaps = 9/258 (3%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +L++ YC ++A LL M + L +++ + +L+ Y K + +E
Sbjct: 482 ITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKE 541
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M++S + PD TYN+ ++ L + A+ + + G + +T++ + +
Sbjct: 542 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESG-TQIELSTYNIILHGLCKNK 600
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI--- 300
L + A R + L + + + +I + G E + L +AF + +
Sbjct: 601 LTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEA----KDLFVAFSSNGLVPNY 656
Query: 301 -SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+Y M + ++ L ++ F E T D + N ++ + G + A
Sbjct: 657 WTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSM 716
Query: 360 ARRRGADPNAKTWEIFSD 377
+ A T +F D
Sbjct: 717 IDEKHFSLEASTASLFID 734
>gi|240254074|ref|NP_172820.4| PPR repeat-containing protein [Arabidopsis thaliana]
gi|332190928|gb|AEE29049.1| PPR repeat-containing protein [Arabidopsis thaliana]
Length = 806
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 96/475 (20%), Positives = 198/475 (41%), Gaps = 55/475 (11%)
Query: 43 LNQFLKSKKRVFKWE----VGDTLKKLRDR-KLYYPALKLSENMEKRGMNKTVSDQAIHL 97
L Q L+ + KWE V D L L R ++ +L + + M+ + +N VS Q+ +
Sbjct: 107 LEQLLQEEGTFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLN--VSTQSYN- 163
Query: 98 DLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFS 157
++ + D + + ++ + KN TY ++++ C++ E A L + ++G S
Sbjct: 164 SVLYHFRETDKMWDVYKEIKD--KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPS 221
Query: 158 SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIE 217
+ FNS+M+ Y K G + + + ++P Y++N+ + L V I+ A +
Sbjct: 222 VVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELAS 281
Query: 218 EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQT 277
+M + G V D T++ LA + G+ A ++++ ++ D+ Y L+ Q
Sbjct: 282 DMNKHG-VEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQL 340
Query: 278 GNLSEVYRIWRS-LRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 336
GN+ + + L F + I M+ L + A F + ++ + D+
Sbjct: 341 GNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVA 400
Query: 337 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKT------------------------- 371
+++I K G+ + A L + + PN++T
Sbjct: 401 YSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLI 460
Query: 372 ----------WEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
+ I D Y ++G ++ A++ + I+TG PS T + + +
Sbjct: 461 SSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETG------ITPSVATFNSLIYGYC 514
Query: 422 QEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPV--MLRRLKMEKV 474
+ +++ A L+++K V + L+ YA G T + + R +K E +
Sbjct: 515 KTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGI 569
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 187/436 (42%), Gaps = 27/436 (6%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAK----VQGIDAAENYFVDLPE--TSKNHLTYG 127
AL+L+ +M K G V ++ +++AK + I A D+ + S + +TY
Sbjct: 276 ALELASDMNKHG----VEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYT 331
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGF---SSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
LL C+ + LL+ M L+ GF S +P + +++ KTG ++ ++ +M
Sbjct: 332 ILLCGQCQLGNIDMGLVLLKDM--LSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQM 389
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
KA + PD Y++ + L + A + +EM D R+ + T L + G+
Sbjct: 390 KADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMC-DKRILPNSRTHGALLLGLCQKGM 448
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+A L L + D+ Y +I Y ++G + E +++ + + ++ +
Sbjct: 449 LLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNS 508
Query: 305 MIQVLVNLKDLPGAEKCFKEWE-SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I +++ A K + G A + T +M AYA G ++ +EL+ +
Sbjct: 509 LIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM-DAYANCGNTKSIDELRREMKAE 567
Query: 364 GADPNAKTWEIFSDYYLR-----NGDMKLAVDCLEKAIDTGRGDGGKWVPSSE-TIRTFM 417
G P T+ + R N + L EK R + +P + T T +
Sbjct: 568 GIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTII 627
Query: 418 RHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG--RTSPVMLRRLKMEKVE 475
++ + K + GA FLEI+K D + LI + G R + + L+ + V
Sbjct: 628 QYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVS 687
Query: 476 VSE-ASKKLLEAICVE 490
+S+ A L++A CV+
Sbjct: 688 LSKFAYTTLIKAHCVK 703
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 100/234 (42%), Gaps = 18/234 (7%)
Query: 59 GDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE 118
G L L + + A L +++ G + I +D AK I+ A F + E
Sbjct: 437 GALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIE 496
Query: 119 T--SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK 176
T + + T+ SL+ YCK +A +L+ +K L S + + +LM YA G+ +
Sbjct: 497 TGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKS 556
Query: 177 IPAIIQEMKASSIMPDSYTYNVWMRALA------AVNDISGAERVIEEMKRDGR------ 224
I + +EMKA I P + TY+V + L N + ER+ E+ K+ R
Sbjct: 557 IDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVL-RERIFEKCKQGLRDMESEG 615
Query: 225 VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI---TLYG 275
+ D T++ + A L+ +++RN + Y LI +YG
Sbjct: 616 IPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYG 669
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 123/313 (39%), Gaps = 36/313 (11%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY S++ CK +KA +L M + + + +NS++ Y +G P++ +
Sbjct: 233 NVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFL 292
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
++M + + PD TYN M L + A ++ + M + G + + TT+ L Y
Sbjct: 293 KKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG-LKPEITTYGTLLQGYAT 351
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G + L + H + + LI Y + G + + ++ +R N ++
Sbjct: 352 KGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVT 411
Query: 302 YLNMIQVL----------------VNLKDLPG--------AEKC-FKEWESG-------- 328
Y +I +L ++ + PG C F +W+
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEML 471
Query: 329 --CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 386
D N +I ++ KEGR+ +E+L + R G P+ T+ D Y G M
Sbjct: 472 DRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMD 531
Query: 387 LAVDCLEKAIDTG 399
A L + G
Sbjct: 532 EATKLLASMVSVG 544
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/317 (20%), Positives = 136/317 (42%), Gaps = 13/317 (4%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A+ + M ++G+N + ++ K ++ A YF + + S ++ Y SL++
Sbjct: 393 AMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C +KA+ L+ +M + + ++ FNS++ + K G + + M + P
Sbjct: 453 SLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 512
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D TY+ + + A +++ M G + D T++ L + Y + E A
Sbjct: 513 DIITYSTLIDGYCLAGKMDEATKLLASMVSVG-MKPDCVTYNTLINGYCKISRMEDALVL 571
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV- 310
+E+E+ D+ Y ++ QT + ++ + + +Y ++ L
Sbjct: 572 FREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK 631
Query: 311 -NLKDLPGAEKCFKEWESGCAT---YDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD 366
NL D + + +++ C T + R N+MIGA K GR + A++L G
Sbjct: 632 NNLTD-----EALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLV 686
Query: 367 PNAKTWEIFSDYYLRNG 383
P+ +T+ + ++ + G
Sbjct: 687 PDVRTYSLMAENLIEQG 703
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/312 (20%), Positives = 126/312 (40%), Gaps = 5/312 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL---PETSKNHLTYGSLL 130
A K+ ++M KRG+ ++ L A +G + +DL NH + L+
Sbjct: 323 ARKMFDSMTKRGLKPEITTYGTLLQGYA-TKGALVEMHGLLDLMVRNGIHPNHYVFSILI 381
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
Y K+ ++A + KM++ L ++ + +++ + K+G E ++M +
Sbjct: 382 CAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLS 441
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
P + YN + +L + A+ +I EM G + D F+++ + + G ++E+
Sbjct: 442 PGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG-ICLDTIFFNSIIDSHCKEGRVIESEK 500
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
+ D+ Y LI Y G + E ++ S+ ++Y +I
Sbjct: 501 LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYC 560
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
+ + A F+E ES + DI N+++ + R A+EL G
Sbjct: 561 KISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELS 620
Query: 371 TWEIFSDYYLRN 382
T+ I +N
Sbjct: 621 TYNIILHGLCKN 632
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 123/280 (43%), Gaps = 7/280 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMP----FNSLMTLYAKTGHPEKI 177
N +Y LL C E +++A LL+ M + G P + +++ + K G +K
Sbjct: 161 NVFSYNILLKGLCDENRSQEALELLQMMPDD--GGDCPPDVVSYTTVINGFFKEGDLDKA 218
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
EM I+P+ TY+ + AL + A V+ M ++G V + T++++
Sbjct: 219 YGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG-VMPNCRTYNSIVH 277
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
Y +G ++A LK++ + D+ Y L+ + G +E +++ S+
Sbjct: 278 GYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKP 337
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
+Y ++Q L + V +++I AYAK+G+++ A +
Sbjct: 338 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVF 397
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
+ R++G +P+ T+ ++G ++ A+ E+ ID
Sbjct: 398 SKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMID 437
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 139/342 (40%), Gaps = 7/342 (2%)
Query: 133 YCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPD 192
Y + EK+ L++M+ ++ +NSL+ + K G+ +K A+ + M S + PD
Sbjct: 64 YASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPD 123
Query: 193 SYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERAL 252
+YT+NV M A + ++ EEM+ + + T+S L + G EKA +
Sbjct: 124 TYTFNVLMNAFKKAKRVDSVWKLFEEMQNQ-NCSPNVITYSILIDAVCKCGGVEKALKVF 182
Query: 253 KELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNL 312
++++R ++ Y +I G++G++ + + ++ + + Y ++I L
Sbjct: 183 LDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRS 242
Query: 313 KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
A K F+E S D ++ GR A + + AR G + +
Sbjct: 243 GRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLY 302
Query: 373 EIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGF 432
+ D ++ + A + + + G VP T M + + A
Sbjct: 303 NVLIDTLCKSKRLDEAWEIFGELEEDG------LVPDVYTFNALMDGLCKSGRIHDAFIL 356
Query: 433 LEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKV 474
L +K+A V V+ LI +GR L+M+ +
Sbjct: 357 LGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSL 398
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 148/382 (38%), Gaps = 48/382 (12%)
Query: 76 KLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCY 133
KL E M+ + + V +I +D V K G++ A F+D+ N TY S+++
Sbjct: 145 KLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGL 204
Query: 134 CKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDS 193
K +KA L E+M L + + +NSL+ ++G + + +EM + + PD
Sbjct: 205 GKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDH 264
Query: 194 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 253
T+ + L S A R+ +E RD A D ++ L ++ ++A
Sbjct: 265 VTFTSLVYGLGVAGRASEARRIFQE-ARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFG 323
Query: 254 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLK 313
ELE D+ + L+ ++G + + + + ++ A
Sbjct: 324 ELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRA-------------------- 363
Query: 314 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 373
GC T D+ V N +I K GR+E A +L + G +P+ T+
Sbjct: 364 --------------GC-TPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYN 408
Query: 374 IFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 433
D + G ++ A+ E+ K ++ T T + VD A
Sbjct: 409 TLIDESCKGGRIEDALRLFEEI-------SAKGFANTVTYNTILNGLCMAGRVDEAYKLF 461
Query: 434 EILKKAVDDLGVEVFEPLIRTY 455
+K+ D V +P TY
Sbjct: 462 NGMKQETVD---GVIDPDFVTY 480
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 109/260 (41%), Gaps = 3/260 (1%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
T+ L+N + K + L E+M+ N + + ++ L+ K G EK + +M
Sbjct: 126 TFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDM 185
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
K+ P+ +TY + L + A + EEM +G VA +++L +G
Sbjct: 186 KSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATR-VVYNSLIHGLGRSGR 244
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR-LAFPNTANISYL 303
+ A + +E+ ++ D + L+ G G SE RI++ R + N+ Y
Sbjct: 245 ADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNL-YN 303
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I L K L A + F E E D+ N ++ K GR+ +A L +R
Sbjct: 304 VLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRA 363
Query: 364 GADPNAKTWEIFSDYYLRNG 383
G P+ + D ++G
Sbjct: 364 GCTPDVTVYNTLIDGLRKSG 383
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 116/259 (44%), Gaps = 3/259 (1%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y SL++ + K T+KA A+ M + L + FN LM + K + + + +EM+
Sbjct: 92 YNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQ 151
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
+ P+ TY++ + A+ + A +V +MK G + T++++ ++G
Sbjct: 152 NQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRG-CRPNIFTYTSMIDGLGKSGHV 210
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
+KA +E+ + Y LI G++G +++R + ++++ ++
Sbjct: 211 DKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSL 270
Query: 306 IQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+ L A + F+E + GCA D+ + NV+I K RL+ A E+ G
Sbjct: 271 VYGLGVAGRASEARRIFQEARDVGCA-LDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDG 329
Query: 365 ADPNAKTWEIFSDYYLRNG 383
P+ T+ D ++G
Sbjct: 330 LVPDVYTFNALMDGLCKSG 348
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 100/249 (40%), Gaps = 10/249 (4%)
Query: 232 FSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 291
F LA Y AGL EK+ ALK +E SAY LI + + G + ++R +
Sbjct: 57 FIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMG 116
Query: 292 LAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLE 351
+ ++ ++ K + K F+E ++ + ++ +++I A K G +E
Sbjct: 117 QSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVE 176
Query: 352 NAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSE 411
A ++ + RG PN T+ D ++G + A E+ G V +
Sbjct: 177 KALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEG------LVATRV 230
Query: 412 TIRTFMRHFEQEKDVDGAEG-FLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLK 470
+ + + D A F E+L K + V F L+ AGR S RR+
Sbjct: 231 VYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHV-TFTSLVYGLGVAGRASEA--RRIF 287
Query: 471 MEKVEVSEA 479
E +V A
Sbjct: 288 QEARDVGCA 296
>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
Length = 793
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 112/262 (42%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + +TY +LLN +C++ M +A LL +MK+ + + +N+L++ YA+ G ++
Sbjct: 241 SPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATD 300
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+++ M A PD +TYNV L + A ++ +EM++ G V+ D T++ L
Sbjct: 301 VVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDAC 360
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
+ A L+E+ + L + ++ + G L E +
Sbjct: 361 FKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDV 420
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
I+Y +I ++ A E D N ++ KE R E AEEL
Sbjct: 421 ITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRA 480
Query: 360 ARRRGADPNAKTWEIFSDYYLR 381
+RG P+ ++ Y +
Sbjct: 481 PPQRGFVPDEVSYGTVMAAYFK 502
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 122/296 (41%), Gaps = 9/296 (3%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHL-----TYGS 128
AL E M + G+ V +D K + A FV + E ++ L T +
Sbjct: 404 ALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKA---FVLMDEMVRSGLKMDTFTLNT 460
Query: 129 LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS 188
LL CKE E+AE LL + + + ++M Y K PE + EM
Sbjct: 461 LLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRK 520
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
+ P TYN ++ L+ + ++ A + E+ G V D TT++ + Y + G EKA
Sbjct: 521 LTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDD-TTYNIIIHAYCKEGDLEKA 579
Query: 249 ERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQV 308
+ ++ + D+ L+ G L + +++ S I+Y +IQ
Sbjct: 580 FQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQA 639
Query: 309 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
L D+ A + F + E D+ NV++ A ++ GR A+++ + G
Sbjct: 640 LCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESG 695
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 137/338 (40%), Gaps = 18/338 (5%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + +TY +L++ K + A LLE+M+E + S + N ++ + G E+
Sbjct: 347 SPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALG 406
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
++ M + PD TYN + A +++ A +++EM R G + D T + L
Sbjct: 407 RLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSG-LKMDTFTLNTLLYNL 465
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNT 297
+ +E+AE L+ R D +Y ++ Y + +W + R P+
Sbjct: 466 CKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSI 525
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
+ +Y +I+ L + L A E D N++I AY KEG LE A +
Sbjct: 526 S--TYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFH 583
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 417
+ P+ T + G ++ A+ E ++ G+ T T +
Sbjct: 584 NKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKK------VDVITYNTLI 637
Query: 418 RHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 455
+ ++ DVD A F D+ V +P + TY
Sbjct: 638 QALCKDNDVDTALRFFA-------DMEVRGLQPDVFTY 668
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 127/314 (40%), Gaps = 45/314 (14%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
NH T+ L++ +C + A + L KM+ L ++ +N+L+ + + G + ++
Sbjct: 208 NHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLL 267
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
MK I+P TYN + A A + I A V+E M G W T++ LA+ +
Sbjct: 268 ARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLW-TYNVLAAGLCQ 326
Query: 242 AGLFEKAERALKELENRN-AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
AG ++A + E+E D+ Y L+ + S+ + +R
Sbjct: 327 AGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMR--------- 377
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
EK K S T+ N+++ +EG+LE A E
Sbjct: 378 ------------------EKGVK---SSLVTH-----NIIVKGLCREGQLEEALGRLEMM 411
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG-RGDGGKWVPSSETIRTFMRH 419
G P+ T+ D + G++ A +++ + +G + D + T+ T + +
Sbjct: 412 TEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMD-------TFTLNTLLYN 464
Query: 420 FEQEKDVDGAEGFL 433
+EK + AE L
Sbjct: 465 LCKEKRYEEAEELL 478
Score = 38.1 bits (87), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 46/102 (45%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+T +L+N C EKA L E E + +N+L+ K + +
Sbjct: 596 VTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFAD 655
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRV 225
M+ + PD +TYNV + AL+ A++++ ++ G++
Sbjct: 656 MEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKL 697
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 138/332 (41%), Gaps = 7/332 (2%)
Query: 62 LKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK 121
L + K Y + L E M+ G+ + I L+ + + A ++ + +
Sbjct: 88 LSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGH 147
Query: 122 --NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
+ +T+GSLLN +C+ A + ++M E+ + + +N+++ K+ +
Sbjct: 148 EPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALD 207
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
++ M+ I PD+ TYN + L A R++ M + + D TF+ L
Sbjct: 208 LLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKR-EIYPDVFTFNALIDAC 266
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNT 297
V+ G +AE +E+ R+ D+ Y LI L E +++ + + FP+
Sbjct: 267 VKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDV 326
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
++Y +I K + K F E + V+I Y + G+L AEE+
Sbjct: 327 --VTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIF 384
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 389
+ G PN T+ + NG ++ A+
Sbjct: 385 KWMVFCGVPPNIITYNVLLHGLCDNGKIEKAL 416
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/341 (20%), Positives = 135/341 (39%), Gaps = 7/341 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N T LLNC+C+ A + L KM +L + F SL+ + + +
Sbjct: 115 NLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMF 174
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M P+ YN + L + A ++ M+ DG + D T+++L S
Sbjct: 175 DRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDG-IRPDAVTYNSLISGLCN 233
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
+G ++ A R + + R + D+ + LI + G +SE ++ + + ++
Sbjct: 234 SGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVT 293
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I L L AE+ F S D+ +++I Y K ++E+ +L
Sbjct: 294 YSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMS 353
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
+RG N T+ + Y R G + +A + + + G P+ T +
Sbjct: 354 QRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVP------PNIITYNVLLHGLC 407
Query: 422 QEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTS 462
++ A L ++K+ D + + +IR AG +
Sbjct: 408 DNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVA 448
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 79/178 (44%), Gaps = 3/178 (1%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELM 138
M +G V +I ++ K + ++ F ++ + +N +TY L+ YC+
Sbjct: 317 MVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGK 376
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
AE + + M + + + +N L+ G EK I+ +M+ S + D TYN+
Sbjct: 377 LNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNI 436
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 256
+R + +++ A + + G WT + + +Y + GL +A+ ++++
Sbjct: 437 IIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLY-KKGLRGEADALFRKMK 493
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 108/261 (41%), Gaps = 21/261 (8%)
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSL---MTLYAKTGHP 174
E + T+ +L++ KE +AE L E+M +L + ++ L + +Y++
Sbjct: 251 EIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEA 310
Query: 175 EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSN 234
E++ M + PD TY++ + + ++ EM + G V + T++
Sbjct: 311 EQMFGF---MVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG-VVRNTVTYTV 366
Query: 235 LASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF 294
L Y AG AE K + ++ Y L+ G + + I ++ +
Sbjct: 367 LIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSG 426
Query: 295 PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCA------TYDI-RVTNVMIGAYAKE 347
+ ++Y N+I ++ + A + W+ C+ T DI T +M+G Y K
Sbjct: 427 MDADIVTY-NII-----IRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKG 480
Query: 348 GRLENAEELKERARRRGADPN 368
R E A+ L + + G PN
Sbjct: 481 LRGE-ADALFRKMKEDGILPN 500
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 60/152 (39%), Gaps = 2/152 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
+KL M +RG+ + + + + ++ AE F + N +TY LL+
Sbjct: 345 GMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLH 404
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C EKA +L M++ + + +N ++ K G + + + P
Sbjct: 405 GLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTP 464
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
D +TY M L A+ + +MK DG
Sbjct: 465 DIWTYTAMMLGLYKKGLRGEADALFRKMKEDG 496
>gi|10140738|gb|AAG13570.1|AC037425_1 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 811
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 135/306 (44%), Gaps = 12/306 (3%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
T+ +L++ CK E+A L E++ + + + +NSL+ Y G ++IP IIQ M
Sbjct: 291 TFSTLIHGLCKVGSMEEALDLFERVTKEGMELEIVTYNSLINGYRLLGLTKEIPKIIQMM 350
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ + PD TY + + D+ +V +++ G + + T+S L + + G+
Sbjct: 351 RGQGVEPDLVTYTILIAGHCESGDVEEGMKVRKDVLDQG-LQLNIVTYSVLLNALFKKGM 409
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL---RLAFPNTANIS 301
F + + L E+ N D+ AY LI Y + G + + ++ ++ + P + N
Sbjct: 410 FCEIDNLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQVCNAMCSSQRVMPTSLN-- 467
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
+ +++ L L A + D+ NV+I YAK G + NA L ++
Sbjct: 468 HFSILLGLCKKGLLVEARWYLENVARKYQPTDVVFYNVVIDGYAKLGDIVNAVRLYDQIT 527
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
G P T Y + GD++LA + +AI +P++ T T M
Sbjct: 528 VAGMHPTIVTCNSLLYGYCKIGDLQLA-ESYFRAIQL-----SGLLPTAVTYTTLMDALS 581
Query: 422 QEKDVD 427
+ +V+
Sbjct: 582 EAGEVN 587
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/269 (18%), Positives = 111/269 (41%), Gaps = 9/269 (3%)
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
E N + +L N Y + M A +L KM LN+ S ++SL+ T +
Sbjct: 146 ECDSNGCVWDALANSYARAQMVHDALYVLSKMSSLNMQISVFTYDSLLHGLRMT---DVA 202
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
+ +EM++ + P Y++++ + L + + A ++E +++G+ TF+ L S
Sbjct: 203 LELFEEMESCGVSPSEYSHSIIINGLCKQDKVGEALSFLQEARKEGKFKPLGMTFNILMS 262
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
G + A+ L + D + LI + G++ E ++ +
Sbjct: 263 ALCNWGFVQSAKSFLCLMLKYGLVPDRYTFSTLIHGLCKVGSMEEALDLFERVTKEGMEL 322
Query: 298 ANISY---LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAE 354
++Y +N ++L K++P K + D+ ++I + + G +E
Sbjct: 323 EIVTYNSLINGYRLLGLTKEIP---KIIQMMRGQGVEPDLVTYTILIAGHCESGDVEEGM 379
Query: 355 ELKERARRRGADPNAKTWEIFSDYYLRNG 383
++++ +G N T+ + + + G
Sbjct: 380 KVRKDVLDQGLQLNIVTYSVLLNALFKKG 408
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 104/239 (43%), Gaps = 2/239 (0%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALL-EKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
S + ++ ++N CK+ +A + L E KE M FN LM+ G +
Sbjct: 214 VSPSEYSHSIIINGLCKQDKVGEALSFLQEARKEGKFKPLGMTFNILMSALCNWGFVQSA 273
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
+ + M ++PD YT++ + L V + A + E + ++G + + T+++L +
Sbjct: 274 KSFLCLMLKYGLVPDRYTFSTLIHGLCKVGSMEEALDLFERVTKEG-MELEIVTYNSLIN 332
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
Y GL ++ + ++ + + DL Y LI + ++G++ E ++ + +
Sbjct: 333 GYRLLGLTKEIPKIIQMMRGQGVEPDLVTYTILIAGHCESGDVEEGMKVRKDVLDQGLQL 392
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
++Y ++ L + E + D+ +++I Y K G +E A ++
Sbjct: 393 NIVTYSVLLNALFKKGMFCEIDNLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQV 451
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 64/339 (18%), Positives = 133/339 (39%), Gaps = 8/339 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY LLN K+ M + + LL ++ + L + ++ L+ Y K G EK +
Sbjct: 393 NIVTYSVLLNALFKKGMFCEIDNLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQVC 452
Query: 182 QEMKASS-IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
M +S +MP S + + L + A +E + R + D ++ + Y
Sbjct: 453 NAMCSSQRVMPTSLNHFSILLGLCKKGLLVEARWYLENVARKYQ-PTDVVFYNVVIDGYA 511
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
+ G A R ++ H + L+ Y + G+L +R+++L+ +
Sbjct: 512 KLGDIVNAVRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYFRAIQLSGLLPTAV 571
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
+Y ++ L ++ F E + + +V++ K+ R + A + +
Sbjct: 572 TYTTLMDALSEAGEVNTMLSLFDEMVAKRIKANAVTYSVIVKGLCKQLRFDEAINVLKDM 631
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 420
+G + + T+ + + ++++A + + G VP+ T +
Sbjct: 632 DSKGINADPITYNTLIQGFCESENVQMAFHIHDIMLCRG------LVPTPVTYNLLINVL 685
Query: 421 EQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
+ V AE LE L++ L + LI+ A G
Sbjct: 686 CLKGKVIQAEILLESLRENGIKLRKFAYTTLIKAQCAKG 724
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 76/165 (46%), Gaps = 11/165 (6%)
Query: 64 KLRDRKL---YYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL--PE 118
K+ D +L Y+ A++LS G+ T +D +++ ++ + F ++
Sbjct: 547 KIGDLQLAESYFRAIQLS------GLLPTAVTYTTLMDALSEAGEVNTMLSLFDEMVAKR 600
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
N +TY ++ CK+L ++A +L+ M + + +N+L+ + ++ + +
Sbjct: 601 IKANAVTYSVIVKGLCKQLRFDEAINVLKDMDSKGINADPITYNTLIQGFCESENVQMAF 660
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
I M ++P TYN+ + L + AE ++E ++ +G
Sbjct: 661 HIHDIMLCRGLVPTPVTYNLLINVLCLKGKVIQAEILLESLRENG 705
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 123/313 (39%), Gaps = 36/313 (11%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY S++ CK +KA +L M + + + +NS++ Y +G P++ +
Sbjct: 233 NVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFL 292
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
++M + + PD TYN M L + A ++ + M + G + + TT+ L Y
Sbjct: 293 KKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG-LKPEITTYGTLLQGYAT 351
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G + L + H + + LI Y + G + + ++ +R N ++
Sbjct: 352 KGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVT 411
Query: 302 YLNMIQVL----------------VNLKDLPG--------AEKC-FKEWESG-------- 328
Y +I +L ++ + PG C F +W+
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEML 471
Query: 329 --CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 386
D N +I ++ KEGR+ +E+L + R G P+ T+ D Y G M
Sbjct: 472 DRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMD 531
Query: 387 LAVDCLEKAIDTG 399
A L + G
Sbjct: 532 EATKLLASMVSVG 544
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/317 (20%), Positives = 136/317 (42%), Gaps = 13/317 (4%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A+ + M ++G+N + ++ K ++ A YF + + S ++ Y SL++
Sbjct: 393 AMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C +KA+ L+ +M + + ++ FNS++ + K G + + M + P
Sbjct: 453 SLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 512
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D TY+ + + A +++ M G + D T++ L + Y + E A
Sbjct: 513 DIITYSTLIDGYCLAGKMDEATKLLASMVSVG-MKPDCVTYNTLINGYCKISRMEDALVL 571
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV- 310
+E+E+ D+ Y ++ QT + ++ + + +Y ++ L
Sbjct: 572 FREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK 631
Query: 311 -NLKDLPGAEKCFKEWESGCAT---YDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD 366
NL D + + +++ C T + R N+MIGA K GR + A++L G
Sbjct: 632 NNLTD-----EALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLV 686
Query: 367 PNAKTWEIFSDYYLRNG 383
P+ +T+ + ++ + G
Sbjct: 687 PDVRTYSLMAENLIEQG 703
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/312 (20%), Positives = 126/312 (40%), Gaps = 5/312 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL---PETSKNHLTYGSLL 130
A K+ ++M KRG+ ++ L A +G + +DL NH + L+
Sbjct: 323 ARKMFDSMTKRGLKPEITTYGTLLQGYA-TKGALVEMHGLLDLMVRNGIHPNHYVFSILI 381
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
Y K+ ++A + KM++ L ++ + +++ + K+G E ++M +
Sbjct: 382 CAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLS 441
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
P + YN + +L + A+ +I EM G + D F+++ + + G ++E+
Sbjct: 442 PGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG-ICLDTIFFNSIIDSHCKEGRVIESEK 500
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
+ D+ Y LI Y G + E ++ S+ ++Y +I
Sbjct: 501 LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYC 560
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
+ + A F+E ES + DI N+++ + R A+EL G
Sbjct: 561 KISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELS 620
Query: 371 TWEIFSDYYLRN 382
T+ I +N
Sbjct: 621 TYNIILHGLCKN 632
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 123/280 (43%), Gaps = 7/280 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMP----FNSLMTLYAKTGHPEKI 177
N +Y LL C E +++A LL+ M + G P + +++ + K G +K
Sbjct: 161 NVFSYNILLKGLCDENRSQEALELLQMMPDD--GGDCPPDVVSYTTVINGFFKEGDLDKA 218
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
EM I+P+ TY+ + AL + A V+ M ++G V + T++++
Sbjct: 219 YGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG-VMPNCRTYNSIVH 277
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
Y +G ++A LK++ + D+ Y L+ + G +E +++ S+
Sbjct: 278 GYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKP 337
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
+Y ++Q L + V +++I AYAK+G+++ A +
Sbjct: 338 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVF 397
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
+ R++G +P+ T+ ++G ++ A+ E+ ID
Sbjct: 398 SKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMID 437
>gi|359484961|ref|XP_002273494.2| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Vitis vinifera]
Length = 609
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 96/193 (49%), Gaps = 3/193 (1%)
Query: 101 AKVQGIDAAENYF--VDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSS 158
AK +G+ AA + + L +TY S++N YC+ + KAE + +M++
Sbjct: 376 AKKRGLRAAAKVYDELILQGCEPGQVTYASIINVYCRMELYSKAEMMFSEMEKKGFNKCV 435
Query: 159 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 218
+ ++S++ +Y KTG + ++ +MK P+ + YN M V ++ E++ +E
Sbjct: 436 VAYSSMVVMYGKTGRLREAMRLVAKMKERGCKPNVWVYNSLMDMHGRVKNLRQVEKLWKE 495
Query: 219 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 278
MKR +V D +++++ S Y +AG FE R E D ++ ++ ++G
Sbjct: 496 MKRK-KVVPDRVSYTSVISAYSKAGDFETCMRFYHEFRMNGGVIDRVIAGIMVGIFSKSG 554
Query: 279 NLSEVYRIWRSLR 291
+ E+ ++ + ++
Sbjct: 555 RVDELVKLLQDMK 567
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/332 (19%), Positives = 149/332 (44%), Gaps = 10/332 (3%)
Query: 72 YPALKLSENMEKRGMNKTVSDQAIHLDLV---AKVQGIDAAENYFVDLPETS--KNHLTY 126
+ AL+ +M K+G+ + D A++ L+ A ++ + AE F + E ++ +
Sbjct: 277 FEALEFFRDMTKKGI---LEDSAVYSSLICSFASIREVKVAEELFREAEEKKILRDPEVF 333
Query: 127 GSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKA 186
L+ Y +E + E+ +++ MK + + S F +++ +AK + E+
Sbjct: 334 LKLVLMYVEEGLMERTIEIVKAMKNVKIRVSDCIFCAIVNGFAKKRGLRAAAKVYDELIL 393
Query: 187 SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE 246
P TY + + S AE + EM++ G +S++ +Y + G
Sbjct: 394 QGCEPGQVTYASIINVYCRMELYSKAEMMFSEMEKKG-FNKCVVAYSSMVVMYGKTGRLR 452
Query: 247 KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI 306
+A R + +++ R ++ Y L+ ++G+ NL +V ++W+ ++ +SY ++I
Sbjct: 453 EAMRLVAKMKERGCKPNVWVYNSLMDMHGRVKNLRQVEKLWKEMKRKKVVPDRVSYTSVI 512
Query: 307 QVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD 366
D + + E+ D + +M+G ++K GR++ +L + + G
Sbjct: 513 SAYSKAGDFETCMRFYHEFRMNGGVIDRVIAGIMVGIFSKSGRVDELVKLLQDMKTEGTG 572
Query: 367 PNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 398
+ + + + LR+ +++ L+++ DT
Sbjct: 573 LDERLYRSALN-ALRDAGLQMQARWLQESFDT 603
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 146/354 (41%), Gaps = 15/354 (4%)
Query: 56 WEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKV----QGIDAAEN 111
+ + + K+RD Y + L + E R ++ + I+ L + + +A E
Sbjct: 226 YRIMEAYIKIRD---YEKVVTLFQEFESRKIDSSPFSTQIYRILCESLGKMGRAFEALE- 281
Query: 112 YFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYA 169
+F D+ + ++ Y SL+ + + AE L + +E + F L+ +Y
Sbjct: 282 FFRDMTKKGILEDSAVYSSLICSFASIREVKVAEELFREAEEKKILRDPEVFLKLVLMYV 341
Query: 170 KTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADW 229
+ G E+ I++ MK I + + A + A +V +E+ G
Sbjct: 342 EEGLMERTIEIVKAMKNVKIRVSDCIFCAIVNGFAKKRGLRAAAKVYDELILQG-CEPGQ 400
Query: 230 TTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS 289
T++++ ++Y L+ KAE E+E + ++ + AY ++ +YG+TG L E R+
Sbjct: 401 VTYASIINVYCRMELYSKAEMMFSEMEKKGFNKCVVAYSSMVVMYGKTGRLREAMRLVAK 460
Query: 290 L--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKE 347
+ R PN Y +++ + +K+L EK +KE + D +I AY+K
Sbjct: 461 MKERGCKPNVW--VYNSLMDMHGRVKNLRQVEKLWKEMKRKKVVPDRVSYTSVISAYSKA 518
Query: 348 GRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRG 401
G E R G + I + ++G + V L+ G G
Sbjct: 519 GDFETCMRFYHEFRMNGGVIDRVIAGIMVGIFSKSGRVDELVKLLQDMKTEGTG 572
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/301 (20%), Positives = 113/301 (37%), Gaps = 39/301 (12%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
L S + Y K M A+ ++MK + +S + +M Y K EK+ + QE
Sbjct: 188 LVCNSAMGGYNKLHMFSSTIAVYDRMKSAGVVPNSESYYRIMEAYIKIRDYEKVVTLFQE 247
Query: 184 --------------------------------------MKASSIMPDSYTYNVWMRALAA 205
M I+ DS Y+ + + A+
Sbjct: 248 FESRKIDSSPFSTQIYRILCESLGKMGRAFEALEFFRDMTKKGILEDSAVYSSLICSFAS 307
Query: 206 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 265
+ ++ AE + E + + ++ D F L +YVE GL E+ +K ++N
Sbjct: 308 IREVKVAEELFREAE-EKKILRDPEVFLKLVLMYVEEGLMERTIEIVKAMKNVKIRVSDC 366
Query: 266 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 325
+ ++ + + L +++ L L ++Y ++I V ++ AE F E
Sbjct: 367 IFCAIVNGFAKKRGLRAAAKVYDELILQGCEPGQVTYASIINVYCRMELYSKAEMMFSEM 426
Query: 326 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 385
E + + M+ Y K GRL A L + + RG PN + D + R ++
Sbjct: 427 EKKGFNKCVVAYSSMVVMYGKTGRLREAMRLVAKMKERGCKPNVWVYNSLMDMHGRVKNL 486
Query: 386 K 386
+
Sbjct: 487 R 487
>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
Length = 722
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 133/326 (40%), Gaps = 5/326 (1%)
Query: 77 LSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYC 134
L ME G+ TV + + + ++AA+ FV++ + +TY SLLN YC
Sbjct: 330 LQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYC 389
Query: 135 KELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSY 194
K ++A L ++ L + + +N L+ Y + G E+ + +EM +PD
Sbjct: 390 KAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVC 449
Query: 195 TYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE 254
TY + M+ ++ A +EM G + D ++ + G KA R +
Sbjct: 450 TYTILMKGSHNACSLAMAREFFDEMLSKG-LQPDCFAYNTRIRAELTLGAIAKAFRLREV 508
Query: 255 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 314
+ D Y LI +TGNL++ + + I+Y +I
Sbjct: 509 MMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGL 568
Query: 315 LPGAEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 373
L A K FK+ S G A + T V I AY + G L +A + G +PN T+
Sbjct: 569 LREARKFFKDMISDGLAPSAVTYT-VFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYN 627
Query: 374 IFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ R G +LA + ++ G
Sbjct: 628 VLIHALCRTGRTQLAYRHFHEMLERG 653
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 104/234 (44%), Gaps = 4/234 (1%)
Query: 144 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM--KASSIMPDSYTYNVWMR 201
A+ +M +L + S + +N+L+ + K G +K+ +++EM + S +P+ T+NV +
Sbjct: 223 AVHAEMLQLGIEPSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVIT 282
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 261
LA D+ A ++E M+ + A T++ L + + G +KA+ E+EN
Sbjct: 283 GLARKGDLEEAAEMVEGMRLSKK--ASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIM 340
Query: 262 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 321
+ Y +I Q+G + + +R I+Y +++ L A
Sbjct: 341 PTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLL 400
Query: 322 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 375
F + + N++I Y + G LE A LKE +G P+ T+ I
Sbjct: 401 FGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTIL 454
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 82/200 (41%), Gaps = 3/200 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
A +L E M G++ I +D + K ++ A++ + + + +TY L++
Sbjct: 502 AFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIH 561
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C+ + +A + M L S++ + + Y + G+ ++M + P
Sbjct: 562 AHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEP 621
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ TYNV + AL A R EM G V + T++ L + G +E A R
Sbjct: 622 NEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKY-TYTLLIDGNCKEGNWEDAMRF 680
Query: 252 LKELENRNAHRDLSAYQFLI 271
E+ H D ++ L
Sbjct: 681 YFEMHQNGIHPDYLTHKALF 700
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 88/229 (38%), Gaps = 8/229 (3%)
Query: 175 EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSN 234
+ I A+ EM I P TYN + + +++EM+ G N
Sbjct: 219 DDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHN 278
Query: 235 LASIYVEAGLFEKA--ERALKELENRNAHRDLSAYQF--LITLYGQTGNLSEVYRIWRSL 290
+ V GL K E A + +E + S++ + LIT G + + + +
Sbjct: 279 V----VITGLARKGDLEEAAEMVEGMRLSKKASSFTYNPLITGLLAKGFVKKADDLQLEM 334
Query: 291 RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRL 350
++Y MI L+ + A+ F E + D+ N ++ Y K G L
Sbjct: 335 ENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSL 394
Query: 351 ENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ A L R G P T+ I D Y R GD++ A E+ ++ G
Sbjct: 395 KEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQG 443
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 162/378 (42%), Gaps = 27/378 (7%)
Query: 76 KLSENMEK------RGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYG 127
++ E ME+ RG TV + ++ + K+ AA + + E ++Y
Sbjct: 189 RIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYS 248
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 187
+++ CK + +A L M+ + + + + +NSL+ +G ++ + +EM
Sbjct: 249 IIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEW 308
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
++ PD T+++ + AL + A V +M + + D T+S+L ++ L+++
Sbjct: 309 NMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIA-MEPDIVTYSSLIHGVCKSSLWKE 367
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW-----RSLRLAFPNTANISY 302
+ L E+ +RN D+ + + ++ + G +SE I R LR PN ++Y
Sbjct: 368 SSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLR---PNV--VTY 422
Query: 303 LNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
+++ + A K F GCA D+ N++I Y K R++ A++L +
Sbjct: 423 NSLMDGYCLHSQMDEARKVFDIMVNKGCAP-DVLSYNILIKGYCKSERIDEAKQLFDEMS 481
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
+G PN+ T + G A + +K G P T T + F
Sbjct: 482 HKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHG------CPPDLITYSTLLSGFC 535
Query: 422 QEKDVDGAEGFLEILKKA 439
+ +D A E LKK+
Sbjct: 536 KHGHLDEALALFEALKKS 553
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 115/252 (45%), Gaps = 1/252 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+T+ L++ CKE + +A ++ KM ++ + + ++SL+ K+ ++ ++ E
Sbjct: 315 VTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNE 374
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + +I PD T+++W+ +S A+ +I M G + + T+++L Y
Sbjct: 375 MLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERG-LRPNVVTYNSLMDGYCLHS 433
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
++A + + N+ D+ +Y LI Y ++ + E +++ + +I++
Sbjct: 434 QMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHT 493
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I L A++ FK+ S D+ + ++ + K G L+ A L E ++
Sbjct: 494 TLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKS 553
Query: 364 GADPNAKTWEIF 375
PN +I
Sbjct: 554 QLKPNHVICKIL 565
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 102/233 (43%), Gaps = 1/233 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY SL++ CK + +++ LL +M N+ + F+ + ++ K G + +II
Sbjct: 350 VTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINL 409
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + P+ TYN M + + A +V + M G A D +++ L Y ++
Sbjct: 410 MIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKG-CAPDVLSYNILIKGYCKSE 468
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
++A++ E+ ++ + + LI+ Q G +++ + I+Y
Sbjct: 469 RIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYS 528
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
++ L A F+ + + + +++G K G+LE+A+EL
Sbjct: 529 TLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKEL 581
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 89/218 (40%), Gaps = 3/218 (1%)
Query: 77 LSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYC 134
L M R + V +I +D+ K + A++ + E N +TY SL++ YC
Sbjct: 371 LLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYC 430
Query: 135 KELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSY 194
++A + + M + +N L+ Y K+ ++ + EM + P+S
Sbjct: 431 LHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSI 490
Query: 195 TYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE 254
T+ + L A+ + ++M G D T+S L S + + G ++A +
Sbjct: 491 THTTLISGLCQAGRPYAAKELFKKMGSHG-CPPDLITYSTLLSGFCKHGHLDEALALFEA 549
Query: 255 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL 292
L+ + + L+ + G L + ++ SL +
Sbjct: 550 LKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSI 587
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 121/313 (38%), Gaps = 36/313 (11%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY S++ CK +KA +L M + + + +NS++ Y +G P++ +
Sbjct: 233 NVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFL 292
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
++M + + PD TYN M L + A ++ + M + G + + TT+ L Y
Sbjct: 293 KKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG-LKPEITTYGTLLQGYAT 351
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G + L + H + + LI Y + G + + ++ +R N ++
Sbjct: 352 KGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVT 411
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEW----------------ESGC---------------- 329
Y +I +L + A + F++ S C
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEML 471
Query: 330 ---ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 386
D N +I ++ KEGR+ +E+L + R G P+ T+ D Y G M
Sbjct: 472 DRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMD 531
Query: 387 LAVDCLEKAIDTG 399
A L + G
Sbjct: 532 EATKLLASMVSVG 544
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/317 (20%), Positives = 136/317 (42%), Gaps = 13/317 (4%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A+ + M ++G+N + ++ K ++ A YF + + S ++ Y SL++
Sbjct: 393 AMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C +KA+ L+ +M + + ++ FNS++ + K G + + M + P
Sbjct: 453 SLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 512
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D TY+ + + A +++ M G + D T++ L + Y + E A
Sbjct: 513 DIITYSTLIDGYCLAGKMDEATKLLASMVSVG-MKPDCVTYNTLINGYCKISRMEDALVL 571
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV- 310
+E+E+ D+ Y ++ QT + ++ + + +Y ++ L
Sbjct: 572 FREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK 631
Query: 311 -NLKDLPGAEKCFKEWESGCAT---YDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD 366
NL D + + +++ C T + R N+MIGA K GR + A++L G
Sbjct: 632 NNLTD-----EALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLV 686
Query: 367 PNAKTWEIFSDYYLRNG 383
P+ +T+ + ++ + G
Sbjct: 687 PDVRTYSLMAENLIEQG 703
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/305 (20%), Positives = 124/305 (40%), Gaps = 5/305 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL---PETSKNHLTYGSLL 130
A K+ ++M KRG+ ++ L A +G + +DL NH + L+
Sbjct: 323 ARKMFDSMTKRGLKPEITTYGTLLQGYA-TKGALVEMHGLLDLMVRNGIHPNHYVFSILI 381
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
Y K+ ++A + KM++ L ++ + +++ + K+G E ++M +
Sbjct: 382 CAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLS 441
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
P + YN + +L + A+ +I EM G + D F+++ + + G ++E+
Sbjct: 442 PGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG-ICLDTIFFNSIIDSHCKEGRVIESEK 500
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
+ D+ Y LI Y G + E ++ S+ ++Y +I
Sbjct: 501 LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYC 560
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
+ + A F+E ES + DI N+++ + R A+EL G
Sbjct: 561 KISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELS 620
Query: 371 TWEIF 375
T+ I
Sbjct: 621 TYNII 625
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 123/280 (43%), Gaps = 7/280 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMP----FNSLMTLYAKTGHPEKI 177
N +Y LL C E +++A LL+ M + G P + +++ + K G +K
Sbjct: 161 NVFSYNILLKGLCDENRSQEALELLQMMPDD--GGDCPPDVVSYTTVINGFFKEGDLDKA 218
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
EM I+P+ TY+ + AL + A V+ M ++G V + T++++
Sbjct: 219 YGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG-VMPNCRTYNSIVH 277
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
Y +G ++A LK++ + D+ Y L+ + G +E +++ S+
Sbjct: 278 GYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKP 337
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
+Y ++Q L + V +++I AYAK+G+++ A +
Sbjct: 338 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVF 397
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
+ R++G +P+ T+ ++G ++ A+ E+ ID
Sbjct: 398 SKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMID 437
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 126/321 (39%), Gaps = 16/321 (4%)
Query: 117 PETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK 176
P+T +TY L++ +CK EK + L ++M + + + + N+L+ +TG
Sbjct: 417 PDT----ITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSS 472
Query: 177 IPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLA 236
E + + D+ TY + A VN+ A + EM + G + D + L
Sbjct: 473 AVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSG-CSPDAIVYYTLI 531
Query: 237 SIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPN 296
S + +AG A L EL+ D Y LI + +T V+ + + + A
Sbjct: 532 SGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLK 591
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 356
I+Y +I DL A+K ++ + +I AY G A E+
Sbjct: 592 PDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEI 651
Query: 357 -KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKW--VPSSETI 413
K+ PN + I + +N +K AV +E D W P++ T
Sbjct: 652 FKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLME--------DMKIWGVTPNTTTY 703
Query: 414 RTFMRHFEQEKDVDGAEGFLE 434
+ EKD++ F++
Sbjct: 704 NAIFKGLRDEKDLEKVFEFMD 724
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 112/287 (39%), Gaps = 10/287 (3%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKM----KELNLGFSSMP----FNSLMTLYAKTGH 173
N +T+G L+N CK + A +LEKM + + S P +N+L+ K G
Sbjct: 339 NVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGR 398
Query: 174 PEKIPAIIQEMKAS-SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTF 232
++ +++ M++ PD+ TYN + +I + + +EM ++G VA + T
Sbjct: 399 QQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEG-VAPNVVTV 457
Query: 233 SNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL 292
+ L G A E + R D Y LI + N + ++ +
Sbjct: 458 NTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLK 517
Query: 293 AFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLEN 352
+ + I Y +I + A E + D N +IG + + +
Sbjct: 518 SGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHR 577
Query: 353 AEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
E+ + G P+ T+ Y +NGD+K A + K I G
Sbjct: 578 VFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAG 624
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 105/262 (40%), Gaps = 2/262 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMK-ELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQ 182
+ Y +L++ CK ++ L+E+M+ + ++ +N L+ + K G EK +
Sbjct: 384 VIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFD 443
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
EM + P+ T N + + +S A E +R G + D T++ L + +
Sbjct: 444 EMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRG-MKGDAVTYTALINAFCNV 502
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY 302
FEKA E+ D Y LI+ + Q G +++ + L+ + Y
Sbjct: 503 NNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCY 562
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+I + KE E D N +I +K G L+ A+++ + +
Sbjct: 563 NTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIK 622
Query: 363 RGADPNAKTWEIFSDYYLRNGD 384
G P T+ + Y NG+
Sbjct: 623 AGVVPTVATYGAVINAYCLNGN 644
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 136/316 (43%), Gaps = 8/316 (2%)
Query: 76 KLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCY 133
+L + M K G+ V + + + + +A N+FV+ + +TY +L+N +
Sbjct: 440 ELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAF 499
Query: 134 CKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDS 193
C EKA L +M + ++ + +L++ +++ G ++ E+K I PD+
Sbjct: 500 CNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDT 559
Query: 194 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 253
YN + N +++EM+ G + D T++ L + + G + A++ ++
Sbjct: 560 VCYNTLIGGFCRTNKFHRVFEMLKEMEEAG-LKPDTITYNTLIAYASKNGDLKFAQKVMR 618
Query: 254 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF---PNTANISYLNMIQVLV 310
++ ++ Y +I Y GN +E I++ ++ A PNT + Y +I L
Sbjct: 619 KMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNT--VIYNILINSLC 676
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
+ A ++ + T + N + E LE E +R +P+
Sbjct: 677 KNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYI 736
Query: 371 TWEIFSDYYLRNGDMK 386
T EI +++ G+++
Sbjct: 737 TMEILTEWLSAVGEIE 752
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/383 (18%), Positives = 141/383 (36%), Gaps = 51/383 (13%)
Query: 127 GSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKA 186
G L+ C+ T + L +M +L S NSL+T A+ G+ ++ ++++M
Sbjct: 274 GRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVE 333
Query: 187 SSIMPDSYTYNVWMR----------ALAAVNDISGAER---------------------- 214
I P+ T+ + + AL + +SG +
Sbjct: 334 MDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGL 393
Query: 215 -----------VIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 263
++E M+ A D T++ L + +AG EK + E+ +
Sbjct: 394 CKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPN 453
Query: 264 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 323
+ L+ +TG +S + + ++Y +I N+ + A + F
Sbjct: 454 VVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFN 513
Query: 324 EW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 382
E +SGC+ D V +I +++ GR+ +A + ++ G P+ + + R
Sbjct: 514 EMLKSGCSP-DAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRT 572
Query: 383 GDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDD 442
+ L++ + G P + T T + + + D+ A+ + + KA
Sbjct: 573 NKFHRVFEMLKEMEEAG------LKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVV 626
Query: 443 LGVEVFEPLIRTYAAAGRTSPVM 465
V + +I Y G + M
Sbjct: 627 PTVATYGAVINAYCLNGNGNEAM 649
>gi|356534408|ref|XP_003535747.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35130-like [Glycine max]
Length = 357
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 108/278 (38%), Gaps = 45/278 (16%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLY------AKTGHPE 175
N TY +L+N + +E + EKAE + E+M+E L +N+LM Y ++ G+P
Sbjct: 75 NICTYTALVNAFVREGLCEKAEEVFEQMQEAGLEPDVYAYNALMETYKFSSPFSRAGYPY 134
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
I M+ PD +YN+ + A AE V ++MKR G + + L
Sbjct: 135 GAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVG-ITPTMKSHMVL 193
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
S Y + G K E L ++ + + ++ LYG+ G ++ + R +
Sbjct: 194 QSAYSKMGNVNKCEEILNQMCKSGLKLNTYVLKSMLNLYGRLGQFGKMEEVLRVM----- 248
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEE 355
E G DI N++I Y + G +E E+
Sbjct: 249 ------------------------------EKGSYVADISTYNILINRYGQAGXIERMED 278
Query: 356 LKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
+ +G P+ TW Y KL + CLE
Sbjct: 279 FFQLLPSKGLKPDVVTWTSRMGAY---SXKKLYLKCLE 313
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/304 (19%), Positives = 117/304 (38%), Gaps = 38/304 (12%)
Query: 157 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
S++ +N+ + K G+ +K I + MK + + TY + + A +
Sbjct: 5 SAVVYNAYINGLMKGGNSDKAEEIFKRMKKDACKSTTETYTMLINLYGKAGKSFMALILF 64
Query: 217 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 276
EM + + T++ L + +V GL EKAE ++++ D+ AY L+ Y
Sbjct: 65 HEMTTH-KCKPNICTYTALVNAFVREGLCEKAEEVFEQMQEAGLEPDVYAYNALMETYKF 123
Query: 277 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES-GCATYDIR 335
+ S R +P GA + F + GC D
Sbjct: 124 SSPFS---------RAGYPY--------------------GAAEIFSLMQHMGCEP-DRA 153
Query: 336 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 395
N+++ AY K G ++AE + + +R G P K+ + Y + G++ + L +
Sbjct: 154 SYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLQSAYSKMGNVNKCEEILNQM 213
Query: 396 IDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 455
+G ++ +++ + + + E L +++K + + LI Y
Sbjct: 214 CKSG------LKLNTYVLKSMLNLYGRLGQFGKMEEVLRVMEKGSYVADISTYNILINRY 267
Query: 456 AAAG 459
AG
Sbjct: 268 GQAG 271
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 76/188 (40%), Gaps = 9/188 (4%)
Query: 72 YPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL-----PETSKNHLTY 126
Y A ++ M+ G + I +D K D AE F D+ T K+H+
Sbjct: 134 YGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMV- 192
Query: 127 GSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKA 186
L + Y K K E +L +M + L ++ S++ LY + G K+ +++ M+
Sbjct: 193 --LQSAYSKMGNVNKCEEILNQMCKSGLKLNTYVLKSMLNLYGRLGQFGKMEEVLRVMEK 250
Query: 187 SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE 246
S + D TYN+ + I E + + G + D T+++ Y L+
Sbjct: 251 GSYVADISTYNILINRYGQAGXIERMEDFFQLLPSKG-LKPDVVTWTSRMGAYSXKKLYL 309
Query: 247 KAERALKE 254
K +E
Sbjct: 310 KCLEIFEE 317
>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
Length = 866
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 83/425 (19%), Positives = 168/425 (39%), Gaps = 65/425 (15%)
Query: 106 IDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLM 165
++ A+ F +P ++N ++G L YC+ + A +L+ M +NL + N+++
Sbjct: 161 MELAQRVFDAMP--ARNEFSFGILARGYCRAGRSIDALKVLDGMPSMNL----VVCNTVV 214
Query: 166 TLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRD--- 222
+ K G E+ +++ M+ + P+ T+N + AL + A R+ ++M+ D
Sbjct: 215 AGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQH 274
Query: 223 GRVAADWTTFSNLASIYVEAGLFE-----------------------------------K 247
G D TF + S + +AG + +
Sbjct: 275 GLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGE 334
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 307
A+ L+E+ + + Y +++ + G + R+ +R + ++Y +++
Sbjct: 335 AQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLH 394
Query: 308 VLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD 366
+ ++ A + E + GCA NV++ + + GR AE L ER +G
Sbjct: 395 AYCSKGNIAAANRILDEMAQKGCAPNSF-TYNVLLQSLWRAGRTTEAERLLERMNEKGYS 453
Query: 367 PNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGG-----------------KWVPS 409
+ I D RN + +A+D ++ + G G G + +P
Sbjct: 454 LDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPD 513
Query: 410 SETIRTFMRHFEQEKDVDGA-EGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRR 468
T + +E D A + LE++ K + V +++ I Y G+TS +
Sbjct: 514 QITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSV-IYDTFIHGYCKHGKTSLAIKVL 572
Query: 469 LKMEK 473
MEK
Sbjct: 573 RDMEK 577
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 91/463 (19%), Positives = 176/463 (38%), Gaps = 71/463 (15%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE------TSKNHLTYG 127
A +L E M +G+ V + + K + A F D+ E + +T+
Sbjct: 226 AERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVTFD 285
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 187
+L+ +C ++A L++ M+ +N ++ + G + +++EM
Sbjct: 286 VMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHE 345
Query: 188 SIMPDSYTYNV-----------------------------------WMRALAAVNDISGA 212
I P+SYTYN+ + A + +I+ A
Sbjct: 346 GIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAA 405
Query: 213 ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLIT 272
R+++EM + G +T L S++ AG +AER L+ + + D + +I
Sbjct: 406 NRILDEMAQKGCAPNSFTYNVLLQSLW-RAGRTTEAERLLERMNEKGYSLDTAGCNIIID 464
Query: 273 LYGQTGNLSEVYRI----WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESG 328
+ L I W A N S+L+++ D +++C +
Sbjct: 465 GLCRNSRLDVAMDIVDGMWEEGSGALGRLGN-SFLSVVS------DSSISQRCLPDQ--- 514
Query: 329 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 388
TY I +I A KEGR + A++ + P++ ++ F Y ++G LA
Sbjct: 515 -ITYSI-----LISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLA 568
Query: 389 VDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVF 448
+ L G PS+ T +R FE++ + + +K+ V +
Sbjct: 569 IKVLRDMEKKGCN------PSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTY 622
Query: 449 EPLIRTYAAAG---RTSPVMLRRLKMEKVEVSEASKKLLEAIC 488
LI+++ G + P++ L+ E V + L++A C
Sbjct: 623 NSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYC 665
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/301 (18%), Positives = 118/301 (39%), Gaps = 22/301 (7%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + +TY SLL+ YC + A +L++M + +S +N L+ + G +
Sbjct: 383 SPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAER 442
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG---------------- 223
+++ M D+ N+ + L + + A +++ M +G
Sbjct: 443 LLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVS 502
Query: 224 ------RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQT 277
R D T+S L S + G F++A++ L E+ ++ D Y I Y +
Sbjct: 503 DSSISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKH 562
Query: 278 GNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVT 337
G S ++ R + N + +Y +I+ K E + + ++
Sbjct: 563 GKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTY 622
Query: 338 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
N +I ++ ++G + A L + + PN ++++ Y + D A + A+
Sbjct: 623 NSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFDAALR 682
Query: 398 T 398
T
Sbjct: 683 T 683
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/336 (16%), Positives = 125/336 (37%), Gaps = 44/336 (13%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
+N L+ + + + A+ +++ S PD +T N+ ++AL + A+RV + M
Sbjct: 113 YNRLILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLLLQALCDAGRMELAQRVFDAMP 172
Query: 221 R--------------------------DGRVAADWTTFSNLASIYVEAGLFEKAERALKE 254
DG + + + + + + + GL E+AER ++
Sbjct: 173 ARNEFSFGILARGYCRAGRSIDALKVLDGMPSMNLVVCNTVVAGFCKEGLVEEAERLVER 232
Query: 255 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL----RLAFPNTANISYLNMIQVLV 310
+ + ++ + I+ + G + + YRI++ + + P +++ M+
Sbjct: 233 MRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVTFDVMLSGFC 292
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
+ + A G + N + + GR+ A+EL G PN+
Sbjct: 293 DAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSY 352
Query: 371 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGD----GGKWVPSSETIRTFMRHFEQEKDV 426
T+ I + G KA D R + G P T + + + + ++
Sbjct: 353 TYNIIVSGLCKEG----------KAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNI 402
Query: 427 DGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTS 462
A L+ + + + L+++ AGRT+
Sbjct: 403 AAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTT 438
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 64/132 (48%), Gaps = 1/132 (0%)
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
+ S + + Y + ++ YCK T A +L M++ S+ +N L+ + + E+I
Sbjct: 544 DISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEI 603
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
++ EMK I P+ TYN +++ ++ A +++EM ++ + + T+F L
Sbjct: 604 MKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQN-ELVPNITSFDLLIK 662
Query: 238 IYVEAGLFEKAE 249
Y + F A+
Sbjct: 663 AYCKITDFPSAQ 674
>gi|449461223|ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
gi|449507064|ref|XP_004162923.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
Length = 844
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 96/428 (22%), Positives = 183/428 (42%), Gaps = 43/428 (10%)
Query: 37 VSVRQQLNQFLKSKKRV--FKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQA 94
VS+ + L+ KS++ + F+W V +++ D KL A++L + R S +
Sbjct: 162 VSLLKALDVLGKSERAILLFEWVVSNSVSG--DVKLDSKAVELMIRILGRE-----SKYS 214
Query: 95 IHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNL 154
I L L+ K+ + Y +D+ + ++L+ Y + ++A A+ E+MK+ L
Sbjct: 215 IALKLLDKI----PIDKYSLDVRACT-------TILHAYSRNGKYKQAIAMFERMKDCGL 263
Query: 155 GFSSMPFNSLMTLYAKTGHP-EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAE 213
S + +N ++ +Y K G +KI ++ EM+ + D +T + + A I+ A+
Sbjct: 264 SPSLVTYNVMLDVYGKMGRSWDKILDLLDEMRNEGLQFDEFTCSTVISACGREGLINEAK 323
Query: 214 RVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITL 273
E+K G T++ L ++ +AG++ +A LKE+E+ N D Y L+
Sbjct: 324 EFFVELKSSGYEPGT-VTYNALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNELVAA 382
Query: 274 YGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCA 330
Y + G E + ++ + PN ++Y +I A + F + +SGC
Sbjct: 383 YVRAGFYEEGATVIDTMTRKGVMPNA--VTYTTVINAYGRAGKEVKALQLFNQMKKSGCV 440
Query: 331 TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
++ N ++ K+ R E ++ R G PN TW G K
Sbjct: 441 P-NVCTYNSILALLGKKSRSEEMIKILSDMRINGCPPNRITWNTLLAMCGDKGKHKFVNH 499
Query: 391 CLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ-EKDVDGAEGFLEILKKAVDDLGVEVFE 449
+ + G + P +T T + + + ++D A+ + E++K F
Sbjct: 500 VFREMKNCG------FEPGKDTFNTLISAYGRCGSELDAAKMYDEMMKAG--------FT 545
Query: 450 PLIRTYAA 457
P TY A
Sbjct: 546 PCATTYNA 553
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 145/338 (42%), Gaps = 22/338 (6%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N TY S+L K+ +E+ +L M+ + + +N+L+ + G + + +
Sbjct: 442 NVCTYNSILALLGKKSRSEEMIKILSDMRINGCPPNRITWNTLLAMCGDKGKHKFVNHVF 501
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+EMK P T+N + A A ++ +EM + G TT++ L +
Sbjct: 502 REMKNCGFEPGKDTFNTLISAYGRCGSELDAAKMYDEMMKAGFTPC-ATTYNALLNALAR 560
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTAN 299
G ++ AE L ++ N+ + +++ ++ Y + GN+ + RI + + FP+
Sbjct: 561 RGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIFPSWVL 620
Query: 300 ISYLNMIQVLVNLK--DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
+ L +L N K + G E+ F+E D+ + N M+ +AK E A+++
Sbjct: 621 LRTL----ILANFKCRAVRGMERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKML 676
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 417
+ R G P+ T+ + Y R G+ A + L+ I + G+ V + I+ F
Sbjct: 677 DLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKS--GESPDLVSYNTIIKGFC 734
Query: 418 RHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 455
R +G ++ + + ++ P I TY
Sbjct: 735 R-----------QGLMQEAIRVMSEMTTRGICPCIFTY 761
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/353 (20%), Positives = 151/353 (42%), Gaps = 9/353 (2%)
Query: 106 IDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNS 163
I+ A+ +FV+L + +TY +LL + K + +A +L++M++ N S+ +N
Sbjct: 319 INEAKEFFVELKSSGYEPGTVTYNALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNE 378
Query: 164 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
L+ Y + G E+ +I M +MP++ TY + A A ++ +MK+ G
Sbjct: 379 LVAAYVRAGFYEEGATVIDTMTRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSG 438
Query: 224 RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 283
V + T++++ ++ + E+ + L ++ + + L+ + G G V
Sbjct: 439 CV-PNVCTYNSILALLGKKSRSEEMIKILSDMRINGCPPNRITWNTLLAMCGDKGKHKFV 497
Query: 284 YRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGA 343
++R ++ ++ +I A K + E T N ++ A
Sbjct: 498 NHVFREMKNCGFEPGKDTFNTLISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNA 557
Query: 344 YAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDG 403
A+ G + AE + R +G PN ++ + Y + G+++ ++ + K I
Sbjct: 558 LARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVR-GLERIGKDIYD----- 611
Query: 404 GKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYA 456
G+ PS +RT + + + V G E E L K + +F ++ +A
Sbjct: 612 GQIFPSWVLLRTLILANFKCRAVRGMERAFEELMKNGYKPDMVIFNSMLSIFA 664
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 112/266 (42%), Gaps = 1/266 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY +LLN + + AE++L M+ + F+ ++ YAK G+ + I +++
Sbjct: 550 TYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGLERIGKDI 609
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
I P + A + G ER EE+ ++G D F+++ SI+ + +
Sbjct: 610 YDGQIFPSWVLLRTLILANFKCRAVRGMERAFEELMKNG-YKPDMVIFNSMLSIFAKNNM 668
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+E+A++ L + DL Y L+ +Y + G + I + L + + +SY
Sbjct: 669 YERAQKMLDLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGESPDLVSYNT 728
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+I+ + A + E + I N + YA G +E+ ++
Sbjct: 729 IIKGFCRQGLMQEAIRVMSEMTTRGICPCIFTYNTFVSGYAGRGMFAEVDEVISYMIQKN 788
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVD 390
PN T++I D Y + + A+D
Sbjct: 789 CKPNELTYKIIVDGYCKARKYQDAMD 814
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 75/371 (20%), Positives = 158/371 (42%), Gaps = 26/371 (7%)
Query: 71 YYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNH------L 124
Y A+ + E M+ G++ ++ + LD+ K + + + +DL + +N
Sbjct: 248 YKQAIAMFERMKDCGLSPSLVTYNVMLDVYGK---MGRSWDKILDLLDEMRNEGLQFDEF 304
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
T ++++ +E + +A+ ++K ++ +N+L+ ++ K G + I++EM
Sbjct: 305 TCSTVISACGREGLINEAKEFFVELKSSGYEPGTVTYNALLQVFGKAGIYSEALNILKEM 364
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ ++ DS TYN + A VI+ M R G V + T++ + + Y AG
Sbjct: 365 EDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDTMTRKG-VMPNAVTYTTVINAYGRAGK 423
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
KA + +++ ++ Y ++ L G+ E+ +I +R+ I++
Sbjct: 424 EVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRINGCPPNRITWNT 483
Query: 305 MIQVLVNLKDLPGAEKCFKE-----WESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
++ + + F+E +E G T+ N +I AY + G +A ++ +
Sbjct: 484 LLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTF-----NTLISAYGRCGSELDAAKMYDE 538
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
+ G P A T+ + R GD K A E + R G K P+ + +
Sbjct: 539 MMKAGFTPCATTYNALLNALARRGDWKAA----ESVLLDMRNKGFK--PNETSFSLMLHC 592
Query: 420 FEQEKDVDGAE 430
+ + +V G E
Sbjct: 593 YAKGGNVRGLE 603
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 73/151 (48%), Gaps = 1/151 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+ + S+L+ + K M E+A+ +L+ ++E L + +NSLM +YA+ G K I++
Sbjct: 654 VIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILKG 713
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
+ S PD +YN ++ + A RV+ EM G + T++ S Y G
Sbjct: 714 LIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRG-ICPCIFTYNTFVSGYAGRG 772
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLY 274
+F + + + + +N + Y+ ++ Y
Sbjct: 773 MFAEVDEVISYMIQKNCKPNELTYKIIVDGY 803
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 60/129 (46%), Gaps = 5/129 (3%)
Query: 331 TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
+ D+R ++ AY++ G+ + A + ER + G P+ T+ + D Y G M + D
Sbjct: 229 SLDVRACTTILHAYSRNGKYKQAIAMFERMKDCGLSPSLVTYNVMLDVY---GKMGRSWD 285
Query: 391 CLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEP 450
+ +D R +G ++ T T + +E ++ A+ F LK + + G +
Sbjct: 286 KILDLLDEMRNEGLQF--DEFTCSTVISACGREGLINEAKEFFVELKSSGYEPGTVTYNA 343
Query: 451 LIRTYAAAG 459
L++ + AG
Sbjct: 344 LLQVFGKAG 352
>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 112/264 (42%), Gaps = 1/264 (0%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + TY +L+N CKE E+A L ++M E+ L + + F +L+ K G +
Sbjct: 293 SPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALR 352
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+ MK I PD TYN + L D+ A +++ EM +G D TF+ L
Sbjct: 353 NFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNG-FKPDKITFTTLMDGC 411
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
+ G + A + D A+ LI+ + G + + R+ + + A +
Sbjct: 412 CKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDD 471
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+Y +I D+ K KE + + N ++ + K+G+++NA+ L
Sbjct: 472 PTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHA 531
Query: 360 ARRRGADPNAKTWEIFSDYYLRNG 383
PN T+ I D + ++G
Sbjct: 532 MLNMEVVPNDITFNILLDGHCKHG 555
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 135/312 (43%), Gaps = 9/312 (2%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
+ L++ +CK A + +++ L S + FN+L++ Y ++ + E+ + M+
Sbjct: 229 FNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVLKSVME 288
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
+ I PD +TY+ + L + + A + +EM G V + TF+ L + G
Sbjct: 289 SERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLV-PNGVTFTTLIDGQCKHGKI 347
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
+ A R + +++R DL Y LI + G+L E ++ + I++ +
Sbjct: 348 DLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTL 407
Query: 306 IQVLVNLKDLPGA-EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+ D+ A E + E G D+ T +I ++GR+ +AE + + G
Sbjct: 408 MDGCCKDGDMDSALEIKDRMVEEGIELDDVAFT-ALISGLCRDGRVRDAERMLKDMLSAG 466
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 424
P+ T+ + D + + GD+K+ L++ GR VP T M F ++
Sbjct: 467 HKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGR------VPGVVTYNALMNGFCKQG 520
Query: 425 DVDGAEGFLEIL 436
+ A+ L +
Sbjct: 521 QMKNAKMLLHAM 532
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 129/303 (42%), Gaps = 43/303 (14%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQG---IDAAENYFVDLP-ETSKNHLTYGSL 129
A +L + MEKRG+ V A++ ++ + +D+A ++ D+ + + +TY L
Sbjct: 52 AYRLLDEMEKRGI---VPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCAPSVITYTIL 108
Query: 130 LNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
++ CK A +LE M E + + +N+L+ + K G+ ++ + +M +S
Sbjct: 109 VDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSC 168
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
PD +TYN+ + ++++EM + G ++ T++ L V++G + A
Sbjct: 169 SPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYG-CEPNFITYNTLMDSLVKSGKYIDAF 227
Query: 250 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 309
+ + R+ + +I ++ + G L Y ++ Q++
Sbjct: 228 NLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELF-------------------QLM 268
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
+ LP DI N+MI + R+++A +L ER G P+
Sbjct: 269 TDRGCLP----------------DIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDV 312
Query: 370 KTW 372
T+
Sbjct: 313 VTY 315
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 142/358 (39%), Gaps = 28/358 (7%)
Query: 104 QGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNS 163
+ D +N+ L S + +TY +L+N +CK ++A LL++M++ + + +N+
Sbjct: 16 EAYDLFKNHLCGL--CSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNT 73
Query: 164 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
++ G + ++M+ P TY + + AL IS A ++E+M G
Sbjct: 74 IIKGLCDNGRVDSALVHYRDMQ-RHCAPSVITYTILVDALCKSARISDASLILEDMIEAG 132
Query: 224 RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 283
A + T++ L + + + G ++A ++ + D+ Y LI Y + +
Sbjct: 133 -CAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDG 191
Query: 284 YRIWRSLRLAFPNTANISYLNMIQVLV---------NLKDLPGAEKCFKEWESGCATYDI 334
++ + + I+Y ++ LV NL + C +
Sbjct: 192 AKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFT------- 244
Query: 335 RVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
N+MI + K G+L+ A EL + RG P+ T+ I R + A LE+
Sbjct: 245 --FNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLER 302
Query: 395 AIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLI 452
+ G P T + + + VD A E+L+ L V LI
Sbjct: 303 MTEAG------CPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLI 354
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/222 (18%), Positives = 94/222 (42%), Gaps = 2/222 (0%)
Query: 162 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 221
N L++ + + ++ + + PDS TY+ + D A R+++EM++
Sbjct: 2 NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61
Query: 222 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 281
G V + ++ + + G + A ++++ R+ + Y L+ ++ +S
Sbjct: 62 RGIVPHN-AVYNTIIKGLCDNGRVDSALVHYRDMQ-RHCAPSVITYTILVDALCKSARIS 119
Query: 282 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 341
+ I + A ++Y +I L ++ A F + + D+ N++I
Sbjct: 120 DASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILI 179
Query: 342 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
Y K+ R ++ +L + + G +PN T+ D +++G
Sbjct: 180 DGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSG 221
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 87/203 (42%), Gaps = 3/203 (1%)
Query: 71 YYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGS 128
Y A L++ M +R + + +D+ KV +D A F + + + TY
Sbjct: 223 YIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNI 282
Query: 129 LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS 188
+++ C+ + A LLE+M E + +NS+++ K ++ + + ++
Sbjct: 283 MISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGG 342
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
D T + + L + AE+++ EM+R+G A D ++ L + +A +K+
Sbjct: 343 YFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGS-APDVVAYTILIHGFCKADQLDKS 401
Query: 249 ERALKELENRNAHRDLSAYQFLI 271
E+ ++ + Y +I
Sbjct: 402 LAFFSEMLDKGCVPTVITYSIVI 424
>gi|15224262|ref|NP_179484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099137|sp|O64624.1|PP163_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g18940
gi|3004555|gb|AAC09028.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|15983785|gb|AAL10489.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|38564280|gb|AAR23719.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|330251736|gb|AEC06830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 131/312 (41%), Gaps = 11/312 (3%)
Query: 79 ENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKE 136
E M K+G+ +D K D A F + E N TY ++L+ K+
Sbjct: 375 EMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKK 434
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 196
+ + +L MK + +N+++ L G + + + +EMK+ PD T+
Sbjct: 435 SRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTF 494
Query: 197 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 256
N + A A ++ EM R G A TT++ L + G + E + +++
Sbjct: 495 NTLISAYGRCGSEVDASKMYGEMTRAG-FNACVTTYNALLNALARKGDWRSGENVISDMK 553
Query: 257 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLK- 313
++ ++Y ++ Y + GN + RI ++ FP+ + L +L N K
Sbjct: 554 SKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTL----LLANFKC 609
Query: 314 -DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
L G+E+ F ++ D+ + N M+ + + + AE + E R G P+ T+
Sbjct: 610 RALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTY 669
Query: 373 EIFSDYYLRNGD 384
D Y+R G+
Sbjct: 670 NSLMDMYVRRGE 681
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 109/251 (43%), Gaps = 8/251 (3%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEM 184
Y ++L+ Y + EKA L E+MKE+ + + +N ++ ++ K G KI ++ EM
Sbjct: 213 YTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEM 272
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
++ + D +T + + A A + A+ E+K G T++ L ++ +AG+
Sbjct: 273 RSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGT-VTYNALLQVFGKAGV 331
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISY 302
+ +A LKE+E + D Y L+ Y + G E + + + PN I+Y
Sbjct: 332 YTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNA--ITY 389
Query: 303 LNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
+I A K F E+GC + N ++ K+ R ++ +
Sbjct: 390 TTVIDAYGKAGKEDEALKLFYSMKEAGCVP-NTCTYNAVLSLLGKKSRSNEMIKMLCDMK 448
Query: 362 RRGADPNAKTW 372
G PN TW
Sbjct: 449 SNGCSPNRATW 459
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 107/270 (39%), Gaps = 1/270 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY +LLN ++ E ++ MK + ++ ++ YAK G+ I I +
Sbjct: 528 TYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRI 587
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
K I P + A ++G+ER K+ G D F+++ SI+ +
Sbjct: 588 KEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHG-YKPDMVIFNSMLSIFTRNNM 646
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+++AE L+ + DL Y L+ +Y + G + I ++L + +SY
Sbjct: 647 YDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNT 706
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+I+ + A + E I N + Y G E++ E +
Sbjct: 707 VIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKND 766
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
PN T+++ D Y R G A+D + K
Sbjct: 767 CRPNELTFKMVVDGYCRAGKYSEAMDFVSK 796
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/332 (18%), Positives = 141/332 (42%), Gaps = 9/332 (2%)
Query: 109 AENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMT 166
A+ +F +L +TY +LL + K + +A ++L++M+E + S+ +N L+
Sbjct: 300 AKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVA 359
Query: 167 LYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA 226
Y + G ++ +I+ M +MP++ TY + A A ++ MK G V
Sbjct: 360 AYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCV- 418
Query: 227 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
+ T++ + S+ + + + L ++++ + + + ++ L G G V R+
Sbjct: 419 PNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRV 478
Query: 287 WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAK 346
+R ++ ++ +I A K + E + N ++ A A+
Sbjct: 479 FREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALAR 538
Query: 347 EGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKW 406
+G + E + + +G P ++ + Y + G+ L ++ +E I G+
Sbjct: 539 KGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNY-LGIERIENRIKE-----GQI 592
Query: 407 VPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 438
PS +RT + + + + G+E + KK
Sbjct: 593 FPSWMLLRTLLLANFKCRALAGSERAFTLFKK 624
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 126/301 (41%), Gaps = 37/301 (12%)
Query: 120 SKNHLTYGSLLNCYCKELMT-EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
S +TY +L+ + K + K +L++M+ L F +++++ A+ G +
Sbjct: 242 SPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAK 301
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
E+K+ P + TYN ++ + A V++EM+ + AD T++ L +
Sbjct: 302 EFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENS-CPADSVTYNELVAA 360
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPN 296
YV AG ++A ++ + + + Y +I YG+ G E +++ S++ A PN
Sbjct: 361 YVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPN 420
Query: 297 T----ANISYLN-------MIQVLVNLKD---------------LPG-------AEKCFK 323
T A +S L MI++L ++K L G + F+
Sbjct: 421 TCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFR 480
Query: 324 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
E +S D N +I AY + G +A ++ R G + T+ + R G
Sbjct: 481 EMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKG 540
Query: 384 D 384
D
Sbjct: 541 D 541
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 78/159 (49%), Gaps = 1/159 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+ + S+L+ + + M ++AE +LE ++E L + +NSLM +Y + G K I++
Sbjct: 632 VIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKT 691
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
++ S + PD +YN ++ + A R++ EM G + T++ S Y G
Sbjct: 692 LEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERG-IRPCIFTYNTFVSGYTAMG 750
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 282
+F + E ++ + + + ++ ++ Y + G SE
Sbjct: 751 MFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSE 789
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 115/311 (36%), Gaps = 55/311 (17%)
Query: 89 TVSDQAIHLDLVAKVQGIDAAENY--------FVDLPETSK----NHLTYGSLLNCYCKE 136
+V + + DLV+ V+G+D + ++ ++ L S +H + +E
Sbjct: 129 SVKSELLRTDLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRE 188
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 196
A LL+K+ + +++ Y++TG EK + + MK P TY
Sbjct: 189 SQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTY 248
Query: 197 NVWMRALAAVN----DISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERAL 252
NV + + I G V++EM+ G + D T S + S GL +A+
Sbjct: 249 NVILDVFGKMGRSWRKILG---VLDEMRSKG-LKFDEFTCSTVLSACAREGLLREAKEFF 304
Query: 253 KELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNL 312
EL++ Y L+ ++G+ G +E +
Sbjct: 305 AELKSCGYEPGTVTYNALLQVFGKAGVYTEALSV-------------------------- 338
Query: 313 KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
KE E D N ++ AY + G + A + E ++G PNA T+
Sbjct: 339 ---------LKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITY 389
Query: 373 EIFSDYYLRNG 383
D Y + G
Sbjct: 390 TTVIDAYGKAG 400
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 3/130 (2%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S + +TY SL++ Y + KAE +L+ +++ L + +N+++ + + G ++
Sbjct: 663 SPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVR 722
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASI 238
++ EM I P +TYN ++ A+ + E VIE M K D R + TF +
Sbjct: 723 MLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCR--PNELTFKMVVDG 780
Query: 239 YVEAGLFEKA 248
Y AG + +A
Sbjct: 781 YCRAGKYSEA 790
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 5/127 (3%)
Query: 333 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 392
D+R ++ AY++ G+ E A +L ER + G P T+ + D + G M + +
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVF---GKMGRSWRKI 265
Query: 393 EKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLI 452
+D R G K+ T T + +E + A+ F LK + G + L+
Sbjct: 266 LGVLDEMRSKGLKF--DEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALL 323
Query: 453 RTYAAAG 459
+ + AG
Sbjct: 324 QVFGKAG 330
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.133 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,339,592,070
Number of Sequences: 23463169
Number of extensions: 300621212
Number of successful extensions: 964973
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4168
Number of HSP's successfully gapped in prelim test: 4553
Number of HSP's that attempted gapping in prelim test: 885598
Number of HSP's gapped (non-prelim): 43012
length of query: 490
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 343
effective length of database: 8,910,109,524
effective search space: 3056167566732
effective search space used: 3056167566732
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 79 (35.0 bits)