BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011226
(490 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O22714|PPR86_ARATH Pentatricopeptide repeat-containing protein At1g60770
OS=Arabidopsis thaliana GN=At1g60770 PE=2 SV=1
Length = 491
Score = 738 bits (1904), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/489 (70%), Positives = 411/489 (84%), Gaps = 2/489 (0%)
Query: 1 MAMPQRFGRTKNIAKRS-KKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVG 59
MAM + R++++ KRS KK++EE LY+RLFK G ++V VRQQLNQFLK K VFKWEVG
Sbjct: 1 MAM-RHLSRSRDVTKRSTKKYIEEPLYNRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVG 59
Query: 60 DTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPET 119
DT+KKLR+R LYYPALKLSE ME+RGMNKTVSDQAIHLDLVAK + I A ENYFVDLPET
Sbjct: 60 DTIKKLRNRGLYYPALKLSEVMEERGMNKTVSDQAIHLDLVAKAREITAGENYFVDLPET 119
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
SK LTYGSLLNCYCKEL+TEKAE LL KMKELN+ SSM +NSLMTLY KTG EK+PA
Sbjct: 120 SKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPA 179
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+IQE+KA ++MPDSYTYNVWMRALAA NDISG ERVIEEM RDGRVA DWTT+SN+ASIY
Sbjct: 180 MIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIY 239
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
V+AGL +KAE+AL+ELE +N RD +AYQFLITLYG+ G L+EVYRIWRSLRLA P T+N
Sbjct: 240 VDAGLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSN 299
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
++YLNMIQVLV L DLPGAE FKEW++ C+TYDIR+ NV+IGAYA+EG ++ A ELKE+
Sbjct: 300 VAYLNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEK 359
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 419
A RRG NAKTWEIF DYY+++GDM A++C+ KA+ G+GDGGKW+PS ET+R M +
Sbjct: 360 APRRGGKLNAKTWEIFMDYYVKSGDMARALECMSKAVSIGKGDGGKWLPSPETVRALMSY 419
Query: 420 FEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEA 479
FEQ+KDV+GAE LEILK D++G E+FEPLIRTYAAAG++ P M RRLKME VEV+EA
Sbjct: 420 FEQKKDVNGAENLLEILKNGTDNIGAEIFEPLIRTYAAAGKSHPAMRRRLKMENVEVNEA 479
Query: 480 SKKLLEAIC 488
+KKLL+ +
Sbjct: 480 TKKLLDEVS 488
>sp|Q9FZ24|PPR4_ARATH Pentatricopeptide repeat-containing protein At1g02370,
mitochondrial OS=Arabidopsis thaliana GN=At1g02370 PE=2
SV=1
Length = 537
Score = 365 bits (937), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/482 (40%), Positives = 286/482 (59%), Gaps = 2/482 (0%)
Query: 8 GRTKNIAKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRD 67
G ++A + + LY +L + +V + LNQF+ V K ++ K LR
Sbjct: 56 GVRTSVAAPTVASRQRELYKKLSMLSVTGGTVAETLNQFIMEGITVRKDDLFRCAKTLRK 115
Query: 68 RKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHL-TY 126
+ A ++ + MEKR M +VSD AI LDL+ K +G++AAENYF +L ++KNH TY
Sbjct: 116 FRRPQHAFEIFDWMEKRKMTFSVSDHAICLDLIGKTKGLEAAENYFNNLDPSAKNHQSTY 175
Query: 127 GSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKA 186
G+L+NCYC EL EKA+A E M ELN +S+PFN++M++Y + PEK+P ++ MK
Sbjct: 176 GALMNCYCVELEEEKAKAHFEIMDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAMKQ 235
Query: 187 SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE 246
I P TY++WM++ ++ND+ G E++I+EM +D W TFSNLA+IY +AGL+E
Sbjct: 236 RGISPCGVTYSIWMQSCGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIYTKAGLYE 295
Query: 247 KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI 306
KA+ ALK +E + + ++ FL++LY EVYR+W SL+ A P N+SYL M+
Sbjct: 296 KADSALKSMEEKMNPNNRDSHHFLMSLYAGISKGPEVYRVWESLKKARPEVNNLSYLVML 355
Query: 307 QVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD 366
Q + L DL G +K F EWES C YD+R+ N+ I Y K E AE++ + A ++
Sbjct: 356 QAMSKLGDLDGIKKIFTEWESKCWAYDMRLANIAINTYLKGNMYEEAEKILDGAMKKSKG 415
Query: 367 PNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDV 426
P +K ++ + L N LA+ LE A+ + +W SSE + F HFE+ KDV
Sbjct: 416 PFSKARQLLMIHLLENDKADLAMKHLEAAVSDSAENKDEWGWSSELVSLFFLHFEKAKDV 475
Query: 427 DGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEA 486
DGAE F +IL L E LI+TYAAA +TSP M RL +++EVSE + LL+
Sbjct: 476 DGAEDFCKILSN-WKPLDSETMTFLIKTYAAAEKTSPDMRERLSQQQIEVSEEIQDLLKT 534
Query: 487 IC 488
+C
Sbjct: 535 VC 536
>sp|Q93WC5|PP300_ARATH Pentatricopeptide repeat-containing protein At4g01990,
mitochondrial OS=Arabidopsis thaliana GN=At4g01990 PE=2
SV=1
Length = 502
Score = 341 bits (875), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 196/480 (40%), Positives = 284/480 (59%), Gaps = 11/480 (2%)
Query: 12 NIAKRSKKHLEEALYDRLFKKGS-SDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKL 70
++ ++KKH ++Y +L G+ + + LNQF+ V K ++ K LR +
Sbjct: 30 SVPTKAKKH--RSIYKKLSSLGTRGGGKMEETLNQFVMEGVPVKKHDLIRYAKDLRKFRQ 87
Query: 71 YYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLL 130
AL++ E ME++ + T SD AI L+L+AK +G++AAE YF L ++ KN TYGSLL
Sbjct: 88 PQRALEIFEWMERKEIAFTGSDHAIRLNLIAKSKGLEAAETYFNSLDDSIKNQSTYGSLL 147
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
NCYC E KA+A E M +LN +S+PFN+LM +Y G PEK+PA++ MK SI
Sbjct: 148 NCYCVEKEEVKAKAHFENMVDLNHVSNSLPFNNLMAMYMGLGQPEKVPALVVAMKEKSIT 207
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
P TY++W+++ ++ D+ G E+V++EMK +G W TF+NLA+IY++ GL+ KAE
Sbjct: 208 PCDITYSMWIQSCGSLKDLDGVEKVLDEMKAEGEGIFSWNTFANLAAIYIKVGLYGKAEE 267
Query: 251 ALKELENRNAHRDL-SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 309
ALK LEN N + D+ Y FLI LY N SEVYR+W L+ +PN N SYL M++ L
Sbjct: 268 ALKSLEN-NMNPDVRDCYHFLINLYTGIANASEVYRVWDLLKKRYPNVNNSSYLTMLRAL 326
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
L D+ G +K F EWES C TYD+R+ NV I +Y K+ E AE + A ++ +
Sbjct: 327 SKLDDIDGVKKVFAEWESTCWTYDMRMANVAISSYLKQNMYEEAEAVFNGAMKKCKGQFS 386
Query: 370 KTWEIFSDYYLRNGDMKLAVDCLEKAI-DTGRGDGGKWVPSSETIRTFMRHFEQEKDVDG 428
K ++ + L+N LA+ E A+ D + W SSE I +F HFE+ KDVDG
Sbjct: 387 KARQLLMMHLLKNDQADLALKHFEAAVLDQDKN----WTWSSELISSFFLHFEEAKDVDG 442
Query: 429 AEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAIC 488
AE F + L K L E + L++TY AAG+ P M +RL+ + + V E + LL IC
Sbjct: 443 AEEFCKTLTK-WSPLSSETYTLLMKTYLAAGKACPDMKKRLEEQGILVDEEQECLLSKIC 501
>sp|Q8LPS6|PPR3_ARATH Pentatricopeptide repeat-containing protein At1g02150
OS=Arabidopsis thaliana GN=At1g02150 PE=2 SV=2
Length = 524
Score = 280 bits (716), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 150/420 (35%), Positives = 237/420 (56%), Gaps = 4/420 (0%)
Query: 24 ALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEK 83
A+Y ++ ++ LNQ+ K+ +++ KWE+ +K+LR K AL++ + M
Sbjct: 68 AIYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNN 127
Query: 84 RG--MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEK 141
RG + SD AI LDL+ KV+GI AE +F+ LPE K+ YGSLLN Y + EK
Sbjct: 128 RGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREK 187
Query: 142 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 201
AEALL M++ +PFN +MTLY +K+ A++ EMK I D Y+YN+W+
Sbjct: 188 AEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLS 247
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 261
+ ++ + E V ++MK D + +WTTFS +A++Y++ G EKAE AL+++E R
Sbjct: 248 SCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITG 307
Query: 262 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 321
R+ Y +L++LYG GN E+YR+W + P+ N+ Y ++ LV + D+ GAEK
Sbjct: 308 RNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKV 367
Query: 322 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 381
++EW ++YD R+ N+++ AY K +LE AE L + G P++ TWEI + + R
Sbjct: 368 YEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTR 427
Query: 382 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVD 441
+ A+ CL A + G W P + F + E+E DV E LE+L+++ D
Sbjct: 428 KRCISEALTCLRNAF-SAEG-SSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSGD 485
>sp|Q9SY07|PP302_ARATH Pentatricopeptide repeat-containing protein At4g02820,
mitochondrial OS=Arabidopsis thaliana GN=At4g02820 PE=2
SV=1
Length = 532
Score = 267 bits (683), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/461 (32%), Positives = 264/461 (57%), Gaps = 12/461 (2%)
Query: 25 LYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENME-K 83
L ++ K S+ V++R+ + + V K+E+ +++LR K Y AL++ E M +
Sbjct: 67 LLSLVYTKRSAVVTIRK----WKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQ 122
Query: 84 RGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAE 143
+ D A+HLDL++K++G+++AE +F D+P+ + H SLL+ Y + +++KAE
Sbjct: 123 EDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAE 182
Query: 144 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 203
AL EKM E S +P+N ++++Y G EK+P +I+E+K + PD TYN+W+ A
Sbjct: 183 ALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIRT-SPDIVTYNLWLTAF 241
Query: 204 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 263
A+ ND+ GAE+V + K + ++ DW T+S L ++Y + EKA ALKE+E + ++
Sbjct: 242 ASGNDVEGAEKVYLKAKEE-KLNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVSKKN 300
Query: 264 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 323
AY LI+L+ G+ V W+ ++ +F + YL+MI +V L + A+ +
Sbjct: 301 RVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYD 360
Query: 324 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
EWES T D R+ N+++ Y + E+ ER +G +P+ TWEI + YL+
Sbjct: 361 EWESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRK 420
Query: 384 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDL 443
DM+ +DC KAID+ + KW + ++ + E++ +V GAE + +L+KA +
Sbjct: 421 DMEKVLDCFGKAIDSVK----KWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKA-GYV 475
Query: 444 GVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 484
+++ L+RTYA AG + ++ R+ + VE+ E +K+L+
Sbjct: 476 NTQLYNSLLRTYAKAGEMALIVEERMAKDNVELDEETKELI 516
>sp|Q84JR3|PP334_ARATH Pentatricopeptide repeat-containing protein At4g21705,
mitochondrial OS=Arabidopsis thaliana GN=At4g21705 PE=2
SV=1
Length = 492
Score = 247 bits (630), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 145/463 (31%), Positives = 240/463 (51%), Gaps = 4/463 (0%)
Query: 24 ALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEK 83
LY ++ G SV +L +++ K+V E+ + LR RK + AL++S+ M +
Sbjct: 26 TLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRKRFLHALEVSKWMNE 85
Query: 84 RGMNK-TVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKA 142
G+ + ++ A+HLDL+ +V G AE YF +L E KN TYG+LLNCY ++ EK+
Sbjct: 86 TGVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGALLNCYVRQQNVEKS 145
Query: 143 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 202
EKMKE+ SS+ +N++M LY G EK+P +++EMK ++ PD+Y+Y + + A
Sbjct: 146 LLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPDNYSYRICINA 205
Query: 203 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 262
A+ D+ + +M+R + DW T++ A Y++ G ++A LK ENR +
Sbjct: 206 FGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVELLKMSENRLEKK 265
Query: 263 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 322
D Y LITLY + G EV R+W + N YL ++Q LV + L AE+
Sbjct: 266 DGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLVKIDALVEAEEVL 325
Query: 323 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 382
EW+S YD RV N +I Y + E AE + E RRG ++WE+ + Y
Sbjct: 326 TEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTPESWELVATAYAEK 385
Query: 383 GDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDD 442
G ++ A C++ A+ G KW P + + + E + E F+ L+ +
Sbjct: 386 GTLENAFKCMKTALGVEVG-SRKWRPGLTLVTSVLSWVGDEGSLKEVESFVASLRNCI-G 443
Query: 443 LGVEVFEPLIRT-YAAAGRTSPVMLRRLKMEKVEVSEASKKLL 484
+ +++ L++ GR +L+R+K +K+E+ E + +L
Sbjct: 444 VNKQMYHALVKADIREGGRNIDTLLQRMKDDKIEIDEETTVIL 486
>sp|Q3E911|PP400_ARATH Pentatricopeptide repeat-containing protein At5g27460
OS=Arabidopsis thaliana GN=At5g27460 PE=2 SV=1
Length = 491
Score = 228 bits (580), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 139/451 (30%), Positives = 230/451 (50%), Gaps = 8/451 (1%)
Query: 29 LFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENME-KRGMN 87
+ +K SV L + + S V E+ K+L Y AL++ E ME ++ +
Sbjct: 44 ILRKNGPRRSVTSLLQERIDSGHAVSLSELRLISKRLIRSNRYDLALQMMEWMENQKDIE 103
Query: 88 KTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLT----YGSLLNCYCKELMTEKAE 143
+V D A+ LDL+ K G+ E YF L +S + Y LL Y K M ++AE
Sbjct: 104 FSVYDIALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLPLLRAYVKNKMVKEAE 163
Query: 144 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 203
AL+EK+ L + PFN +M LY +G EK+ ++ MK + I + +YN+WM A
Sbjct: 164 ALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYNLWMNAC 223
Query: 204 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 263
V+ ++ E V +EM D V W++ LA++Y+++G EKA L++ E +
Sbjct: 224 CEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSGFDEKARLVLEDAEKMLNRSN 283
Query: 264 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 323
Y FLITLY GN V R+W + + ++Y+ ++ LV DL AE+ F
Sbjct: 284 RLGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDLEEAERVFS 343
Query: 324 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
EWE+ C YD+RV+NV++GAY + G + AE L RG PN KTWEI + +++
Sbjct: 344 EWEAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPNYKTWEILMEGWVKCE 403
Query: 384 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDL 443
+M+ A+D + + R W PS + +FE+E+ ++ A ++ L + +
Sbjct: 404 NMEKAIDAMHQVFVLMR--RCHWRPSHNIVMAIAEYFEKEEKIEEATAYVRDLHR-LGLA 460
Query: 444 GVEVFEPLIRTYAAAGRTSPVMLRRLKMEKV 474
+ ++ L+R + A R + + +K++K+
Sbjct: 461 SLPLYRLLLRMHEHAKRPAYDIYEMMKLDKL 491
>sp|Q9SKU6|PP166_ARATH Pentatricopeptide repeat-containing protein At2g20710,
mitochondrial OS=Arabidopsis thaliana GN=At2g20710 PE=2
SV=1
Length = 490
Score = 227 bits (578), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 131/416 (31%), Positives = 227/416 (54%), Gaps = 6/416 (1%)
Query: 23 EALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENM- 81
+ L R+ + G S+ + L+ +L V E+ +K LR + AL++S+ M
Sbjct: 38 DTLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMS 97
Query: 82 EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEK 141
E R + D AI LDL+AKV G+ AE +F +P +N+ YG+LLNCY + + K
Sbjct: 98 EHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHK 157
Query: 142 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 201
AE + ++MKEL +P+N ++ LY +TG + +++EM+ ++ PD +T N +
Sbjct: 158 AEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLH 217
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR-NA 260
A + V+D+ G E+ + + D + DW T+++ A+ Y++AGL EKA L++ E NA
Sbjct: 218 AYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNA 277
Query: 261 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 320
+ AY+ L++ YG G EVYR+W SL N Y+++I L+ + D+ EK
Sbjct: 278 QKRKHAYEVLMSFYGAAGKKEEVYRLW-SLYKELDGFYNTGYISVISALLKMDDIEEVEK 336
Query: 321 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 380
+EWE+G + +DIR+ +++I Y K+G +E AEE+ ++ + TWE + Y
Sbjct: 337 IMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYK 396
Query: 381 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 436
G M+ AV+ ++AI+ + W P + + + + E ++D++G L +L
Sbjct: 397 MAGKMEKAVEKWKRAIEVSKPG---WRPHQVVLMSCVDYLEGQRDMEGLRKILRLL 449
>sp|Q94B59|PP372_ARATH Pentatricopeptide repeat-containing protein At5g09450,
mitochondrial OS=Arabidopsis thaliana GN=At5g09450 PE=2
SV=1
Length = 409
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 161/296 (54%), Gaps = 4/296 (1%)
Query: 57 EVGDTLKKLRDRKLYYPALKLSENMEKRGMNK-TVSDQAIHLDLVAKVQGIDAAENYFVD 115
E+ + K+LR + Y AL+++E M + +K + +D A +DL++KV GIDAAE YF
Sbjct: 89 ELREISKELRRTRRYKHALEVTEWMVQHEESKISDADYASRIDLISKVFGIDAAERYFEG 148
Query: 116 LPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELN-LGFSSMPFNSLMTLYAKTGHP 174
L SK TY SLL+ Y TE+AEAL +++ E + L F ++ +N +MTLY G
Sbjct: 149 LDIDSKTAETYTSLLHAYAASKQTERAEALFKRIIESDSLTFGAITYNEMMTLYMSVGQV 208
Query: 175 EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSN 234
EK+P +I+ +K + PD +TYN+W+ + AA +I +++EEM+ D W + +
Sbjct: 209 EKVPEVIEVLKQKKVSPDIFTYNLWLSSCAATFNIDELRKILEEMRHDASSNEGWVRYID 268
Query: 235 LASIYVEAGLFEKAERALK-ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 293
L SIY+ + AE L E E + R+ Y FL+ L+ GN + +IW+SLR
Sbjct: 269 LTSIYINSSRVTNAESTLPVEAEKSISQREWITYDFLMILHTGLGNKVMIDQIWKSLRNT 328
Query: 294 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEG 348
++ SY+ ++ + L L AE+ +W ES +D ++ A+ G
Sbjct: 329 NQILSSRSYICVLSSYLMLGHLREAEEIIHQWKESKTTEFDASACLRILNAFRDVG 384
>sp|Q9C7F1|PPR61_ARATH Putative pentatricopeptide repeat-containing protein At1g28020
OS=Arabidopsis thaliana GN=At1g28020 PE=3 SV=2
Length = 566
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 125/436 (28%), Positives = 211/436 (48%), Gaps = 24/436 (5%)
Query: 40 RQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGM-NKTVSDQAIHLD 98
RQQ NQ S RV +KKLRD AL++SE M K + N D A L
Sbjct: 60 RQQGNQVNPSHVRVI-------IKKLRDSDQSLQALQVSEWMSKEKICNLIPEDFAARLH 112
Query: 99 LVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTE-KAEALLEKMKELNLGFS 157
L+ V G++ AE +F +P+ ++ Y SLLN Y + T KAEA +KM++L L
Sbjct: 113 LIENVVGLEEAEKFFESIPKNARGDSVYTSLLNSYARSDKTLCKAEATFQKMRDLGLLLR 172
Query: 158 SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIE 217
+P+N++M+LY+ + EK+ ++ EMK + + D+ T N ++ +AV D++ E+ +
Sbjct: 173 PVPYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSAVCDVTEMEKFLN 232
Query: 218 EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL-SAYQFLITLYGQ 276
+ + + +W T ++A Y+ A KA + L+ E + L SAY L+ LYG+
Sbjct: 233 KWEGIHGIKLEWHTTLDMAKAYLRARSSGKAMKMLRLTEQLVDQKSLKSAYDHLMKLYGE 292
Query: 277 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 336
GN EV R+W+ + N Y +I+ L+ + D+ GAE+ +K WES +D R+
Sbjct: 293 AGNREEVLRVWKLYKSKIGERDNNGYRTVIRSLLKVDDIVGAEEIYKVWESLPLEFDHRI 352
Query: 337 TNVMIGAYAKEGRLENAEEL---KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
++ Y G E AE+L K RR P E + D ++ D+K + L
Sbjct: 353 PTMLASGYRDRGMTEKAEKLMNSKTIKDRRMNKPVTPLLEQWGD-QMKPSDLKCLIKNLR 411
Query: 394 KAIDTGRG-DGGKWVPSSETIRTFMRHF-------EQEKDVDGAEGFLEILKKAVDDLGV 445
+ + +W+ + ++ + E ++ AE + E + + + D V
Sbjct: 412 DSKQFSKALQVSEWMGEKQVCNLYLEDYAARLYLTENVLGLEEAEKYFENIPENMKDYSV 471
Query: 446 EVFEPLIRTYAAAGRT 461
V L+ +YA + +
Sbjct: 472 YV--ALLSSYAKSDKN 485
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 34/192 (17%)
Query: 62 LKKLRDRKLYYPALKLSENM-EKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS 120
+K LRD K + AL++SE M EK+ N + D A L L V G++ AE YF ++PE
Sbjct: 407 IKNLRDSKQFSKALQVSEWMGEKQVCNLYLEDYAARLYLTENVLGLEEAEKYFENIPENM 466
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
K++ Y +LL+ Y K + NLG + I
Sbjct: 467 KDYSVYVALLSSYAKS--------------DKNLG-------------------NMVDEI 493
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
++EM+ +++ PD T N ++ AA + I E + + + + T +A YV
Sbjct: 494 LREMEENNVDPDLITVNHVLKVYAAESKIQAMEMFMRRWGTEDGIKLERGTMIAMAKAYV 553
Query: 241 EAGLFEKAERAL 252
+AGL +K+ R +
Sbjct: 554 KAGLTKKSGRGV 565
>sp|Q9C977|PP135_ARATH Pentatricopeptide repeat-containing protein At1g80270,
mitochondrial OS=Arabidopsis thaliana GN=At1g80270 PE=1
SV=1
Length = 596
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 117/448 (26%), Positives = 211/448 (47%), Gaps = 29/448 (6%)
Query: 37 VSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENME-KRGMNKTVSDQAI 95
+S+ L+++++ + + E+ + +LR R++Y AL++SE +E + + T D A
Sbjct: 142 LSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTERDYAS 201
Query: 96 HLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLL-NCYCKELMTEKAEALLEKMKELNL 154
LDL K++G++ E +P++ K + Y +LL NC +K+E + KMK+L
Sbjct: 202 RLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAG-NVKKSELVFNKMKDLGF 260
Query: 155 GFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAER 214
S + ++ L+ + +KI ++ M+ +I P TY + + A NDISG E+
Sbjct: 261 PLSGFTCDQMLLLHKRIDR-KKIADVLLLMEKENIKPSLLTYKILIDVKGATNDISGMEQ 319
Query: 215 VIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLY 274
++E MK +G V D+ T + A Y AGL +KAE+ LKE+E + + A++ L+++Y
Sbjct: 320 ILETMKDEG-VELDFQTQALTARHYSGAGLKDKAEKVLKEMEGESLEANRRAFKDLLSIY 378
Query: 275 GQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK-----EWESGC 329
G EV RIW ++ L IQ L + AE F+ + +
Sbjct: 379 ASLGREDEVKRIW---KICESKPYFEESLAAIQAFGKLNKVQEAEAIFEKIVKMDRRASS 435
Query: 330 ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 389
+TY +V++ Y L ++L +R G A TW+ Y+ G+++ A
Sbjct: 436 STY-----SVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEKAD 490
Query: 390 DCLEKAIDTGRGDGGKWVPSSETIRTF---MRHFEQEKDVDGAEGFLEILKKAVDDLGVE 446
L+KA K + + +F M + + DV E +++A +
Sbjct: 491 SLLDKA--------SKQSHTKLMMNSFMYIMDEYSKRGDVHNTEKIFLKMREAGYTSRLR 542
Query: 447 VFEPLIRTYAAAGRTSPVMLRRLKMEKV 474
F+ L++ Y A + M RLK + +
Sbjct: 543 QFQALMQAYINAKSPAYGMRDRLKADNI 570
>sp|Q9XI21|PPR44_ARATH Pentatricopeptide repeat-containing protein At1g15480,
mitochondrial OS=Arabidopsis thaliana GN=At1g15480 PE=2
SV=2
Length = 594
Score = 136 bits (342), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 111/441 (25%), Positives = 204/441 (46%), Gaps = 11/441 (2%)
Query: 35 SDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENM-EKRGMNKTVSDQ 93
S +SV L+++++ K + E + +LR R+++ AL+++E + E + D
Sbjct: 138 SGLSVGSALDKWVEQGKDTNRKEFESAMLQLRKRRMFGRALQMTEWLDENKQFEMEERDY 197
Query: 94 AIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELN 153
A LDL++KV+G E Y +PE+ + L Y +LL + AEA+ KMK+L
Sbjct: 198 ACRLDLISKVRGWYKGEAYIKTIPESFRGELVYRTLLANHVATSNVRTAEAVFNKMKDLG 257
Query: 154 LGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAE 213
S+ N ++ LY + +KI ++ ++ ++ P+ TY + + + NDI+G E
Sbjct: 258 FPLSTFTCNQMLILYKRV-DKKKIADVLLLLEKENLKPNLNTYKILIDTKGSSNDITGME 316
Query: 214 RVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITL 273
+++E MK +G V D + +A Y AGL EKAE+ LKE+E + + + L+++
Sbjct: 317 QIVETMKSEG-VELDLRARALIARHYASAGLKEKAEKVLKEMEGESLEENRHMCKDLLSV 375
Query: 274 YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYD 333
YG EV R+W ++ N L I + + AE F++
Sbjct: 376 YGYLQREDEVRRVW---KICEENPRYNEVLAAILAFGKIDKVKDAEAVFEKVLKMSHRVS 432
Query: 334 IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
V +V++ Y + ++L ++ G + A TW+ Y+ G+++ A L
Sbjct: 433 SNVYSVLLRVYVDHKMVSEGKDLVKQMSDSGCNIGALTWDAVIKLYVEAGEVEKAESSLS 492
Query: 394 KAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIR 453
KAI + + P + M + + DV E + +K+A ++ LI+
Sbjct: 493 KAIQS-----KQIKPLMSSFMYLMHEYVRRGDVHNTEKIFQRMKQAGYQSRFWAYQTLIQ 547
Query: 454 TYAAAGRTSPVMLRRLKMEKV 474
Y A + M R+K + +
Sbjct: 548 AYVNAKAPAYGMKERMKADNI 568
>sp|Q9LRP6|PP234_ARATH Pentatricopeptide repeat-containing protein At3g15590,
mitochondrial OS=Arabidopsis thaliana GN=At3g15590 PE=2
SV=1
Length = 610
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 127/474 (26%), Positives = 211/474 (44%), Gaps = 29/474 (6%)
Query: 9 RTKNIAKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDR 68
+K+ K +KK + LY+ + + SV+ L +++K K + + EV + LR R
Sbjct: 131 HSKDGGKPTKKRGQSELYESIV----AYKSVKHVLEKWVKEGKDLSQAEVTLAIHNLRKR 186
Query: 69 KLYYPALKLSENMEKRGMNK----TVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHL 124
K Y L+L E + G N T ++ A LDLVAKV + AE + D+PE+S+ +
Sbjct: 187 KSYAMCLQLWEWL---GANTQFEFTEANYASQLDLVAKVHSLQKAEIFLKDIPESSRGEV 243
Query: 125 TYGSLL-NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
Y +LL NC K KAE + KMKEL S N L+ LY+ +KI ++
Sbjct: 244 VYRTLLANCVLKH-HVNKAEDIFNKMKELKFPTSVFACNQLLLLYSMHDR-KKISDVLLL 301
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ +I P TY+ + + DI+G E+++E +K +G + D S LA Y+ AG
Sbjct: 302 MERENIKPSRATYHFLINSKGLAGDITGMEKIVETIKEEG-IELDPELQSILAKYYIRAG 360
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
L E+A+ +KE+E + + + L+ LY G+ V R+ R + N Y
Sbjct: 361 LKERAQDLMKEIEGKGLQQTPWVCRSLLPLYADIGDSDNVRRLSRFV------DQNPRYD 414
Query: 304 NMIQVLV---NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
N I + LK++ AE F+ + + ++ Y + L +L +R
Sbjct: 415 NCISAIKAWGKLKEVEEAEAVFERLVEKYKIFPMMPYFALMEIYTENKMLAKGRDLVKRM 474
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 420
G TW Y++ G++ A L +A K P T + +
Sbjct: 475 GNAGIAIGPSTWHALVKLYIKAGEVGKAELILNRATKD-----NKMRPMFTTYMAILEEY 529
Query: 421 EQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKV 474
+ DV E +K+A + +E ++ Y A + M+ R+K + V
Sbjct: 530 AKRGDVHNTEKVFMKMKRASYAAQLMQYETVLLAYINAKTPAYGMIERMKADNV 583
>sp|Q940Q2|PPR19_ARATH Pentatricopeptide repeat-containing protein At1g07590,
mitochondrial OS=Arabidopsis thaliana GN=At1g07590 PE=2
SV=1
Length = 534
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 172/392 (43%), Gaps = 3/392 (0%)
Query: 97 LDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGF 156
L+ K+ G+ E F +P+ +N L Y +L+ + + A ++KM+EL
Sbjct: 140 LEFTVKLHGVSQGEKLFTRVPQEFQNELLYNNLVIACLDQGVIRLALEYMKKMRELGYRT 199
Query: 157 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
S + +N L+ + G + I + MKA P TY++ M+ A ++I G +
Sbjct: 200 SHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEANEHNIDGVLKAF 259
Query: 217 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 276
+ MK+ G V + ++ LA + A L+ AE +E+E + S L+ LYG+
Sbjct: 260 DGMKKAG-VEPNEVSYCILAMAHAVARLYTVAEAYTEEIEKSITGDNWSTLDILMILYGR 318
Query: 277 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 336
G E+ R W +R F + + SYL + + +L AE+ + E ++ +
Sbjct: 319 LGKEKELARTWNVIR-GFHHVRSKSYLLATEAFARVGNLDRAEELWLEMKNVKGLKETEQ 377
Query: 337 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 396
N ++ Y K+G +E A + G PN+ T+ + + MK A+ +E +
Sbjct: 378 FNSLLSVYCKDGLIEKAIGVFREMTGNGFKPNSITYRHLALGCAKAKLMKEALKNIEMGL 437
Query: 397 DTGRGDG-GKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 455
+ G P ET + + F ++ DV+ +E E +K A + V+ L + Y
Sbjct: 438 NLKTSKSIGSSTPWLETTLSIIECFAEKGDVENSEKLFEEVKNAKYNRYAFVYNALFKAY 497
Query: 456 AAAGRTSPVMLRRLKMEKVEVSEASKKLLEAI 487
A P + +R+ + S LL+ +
Sbjct: 498 VKAKVYDPNLFKRMVLGGARPDAESYSLLKLV 529
>sp|O82178|PP186_ARATH Pentatricopeptide repeat-containing protein At2g35130
OS=Arabidopsis thaliana GN=At2g35130 PE=2 SV=1
Length = 591
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 132/326 (40%), Gaps = 48/326 (14%)
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI 177
+ N TY +L+N + +E + EKAE + E+++E L +N+LM Y++ G+P
Sbjct: 294 QCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGA 353
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
I M+ PD +YN+ + A S AE V EEMKR G +A + L S
Sbjct: 354 AEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLG-IAPTMKSHMLLLS 412
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
Y +A K E +KE+ D ++ LYG+ G +++
Sbjct: 413 AYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKM-------------- 458
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
EK E E+G T DI N++I Y K G LE EEL
Sbjct: 459 ---------------------EKILAEMENGPCTADISTYNILINIYGKAGFLERIEELF 497
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL---EKAIDTGRGDGGKWVPSSETIR 414
+ + P+ TW Y R KL V CL E+ ID+G P T +
Sbjct: 498 VELKEKNFRPDVVTWTSRIGAYSRK---KLYVKCLEVFEEMIDSG------CAPDGGTAK 548
Query: 415 TFMRHFEQEKDVDGAEGFLEILKKAV 440
+ E+ V+ L + K V
Sbjct: 549 VLLSACSSEEQVEQVTSVLRTMHKGV 574
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 91/210 (43%), Gaps = 17/210 (8%)
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
++ SS PD +N+ + A AE + ++ + R T++ L Y AG
Sbjct: 146 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQL-LESRYVPTEDTYALLIKAYCMAG 204
Query: 244 LFEKAERALKELENRNAHR---DLSAYQ-FLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
L E+AE L E++N + ++ Y ++ L + GN E +++ ++
Sbjct: 205 LIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 264
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGC------ATYDIRVTNVMIGAYAKEGRLENA 353
+Y +++NL A K + W+ C +I ++ A+A+EG E A
Sbjct: 265 ETY----NLMINLYG--KASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKA 318
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNG 383
EE+ E+ + G +P+ + + Y R G
Sbjct: 319 EEIFEQLQEDGLEPDVYVYNALMESYSRAG 348
Score = 36.2 bits (82), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 45/103 (43%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY L+N Y K E+ E L ++KE N + + S + Y++ K + +EM
Sbjct: 476 TYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEM 535
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAA 227
S PD T V + A ++ + V+ M + V++
Sbjct: 536 IDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKGVTVSS 578
>sp|P0C7Q9|PPR56_ARATH Pentatricopeptide repeat-containing protein At1g22960,
mitochondrial OS=Arabidopsis thaliana GN=At1g22960 PE=2
SV=1
Length = 718
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 147/368 (39%), Gaps = 47/368 (12%)
Query: 61 TLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS 120
LK LRD ++ A + E M + G+ TV LD K ++ + ++++ +
Sbjct: 209 VLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRN 268
Query: 121 K--NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
+ +TY L+N + K E+A M+ + FN L+ Y K G +
Sbjct: 269 IEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAW 328
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+ EM + I P + TYN+++ AL I A ++ M A D +++ L
Sbjct: 329 GVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM-----AAPDVVSYNTLMHG 383
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPN 296
Y++ G F +A +L + H + Y LI ++GNL R+ + +L FP+
Sbjct: 384 YIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPD 443
Query: 297 TANISYLNMIQVLVNLKDLPGA--------------------------------EKCFKE 324
I+Y +++ V +L A +K F+
Sbjct: 444 V--ITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRL 501
Query: 325 WESGCAT----YDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 380
E AT D+ + NV I K G L A E + + R G P+ T+ YL
Sbjct: 502 HEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYL 561
Query: 381 RNGDMKLA 388
NG K+A
Sbjct: 562 ENGQFKMA 569
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 130/303 (42%), Gaps = 4/303 (1%)
Query: 70 LYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSL 129
L+ A +++ M G+ T S I++ + ID A + + + ++Y +L
Sbjct: 323 LFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM--AAPDVVSYNTL 380
Query: 130 LNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
++ Y K +A L + ++ ++ S + +N+L+ ++G+ E + +EM I
Sbjct: 381 MHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLI 440
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
PD TY ++ ++S A V +EM R G + D ++ A + G +KA
Sbjct: 441 FPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKG-IKPDGYAYTTRAVGELRLGDSDKAF 499
Query: 250 RALKELENRNAHR-DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQV 308
R +E+ + H DL+ Y I + GNL + R + +++Y +I+
Sbjct: 500 RLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRG 559
Query: 309 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 368
+ A + E + V+I +AK GRLE A + ++RG PN
Sbjct: 560 YLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPN 619
Query: 369 AKT 371
T
Sbjct: 620 VMT 622
Score = 38.9 bits (89), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+H+TY +++ Y + + A L ++M L S + + L+ +AK G E+
Sbjct: 549 DHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYS 608
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EMK + P+ T+N + + +I A R + +M+ +G + + +++ L S +
Sbjct: 609 TEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEG-IPPNKYSYTMLISKNCD 667
Query: 242 AGLFEKAERALK 253
FEK E +K
Sbjct: 668 ---FEKWEEVVK 676
>sp|Q9S7Q2|PP124_ARATH Pentatricopeptide repeat-containing protein At1g74850,
chloroplastic OS=Arabidopsis thaliana GN=PTAC2 PE=2 SV=1
Length = 862
Score = 89.0 bits (219), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 163/386 (42%), Gaps = 24/386 (6%)
Query: 95 IHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKEL 152
I + L+ + +D F ++P S++ +Y +L+N Y + E + LL++MK
Sbjct: 146 IMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNE 205
Query: 153 NLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISG 211
+ S + +N+++ A+ G E + + EM+ I PD TYN + A A
Sbjct: 206 KISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDE 265
Query: 212 AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 271
AE V M DG + D TT+S+L + + EK L E+ + + D+++Y L+
Sbjct: 266 AEMVFRTMN-DGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLL 324
Query: 272 TLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPG----AEKCFKEW 325
Y ++G++ E ++ ++ A PN N VL+NL G + F E
Sbjct: 325 EAYAKSGSIKEAMGVFHQMQAAGCTPNA------NTYSVLLNLFGQSGRYDDVRQLFLEM 378
Query: 326 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 385
+S D N++I + + G + L +P+ +T+E + G
Sbjct: 379 KSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLH 438
Query: 386 KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGV 445
+ A L+ VPSS+ + F Q + A + + + +
Sbjct: 439 EDARKILQYMT------ANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSI 492
Query: 446 EVFEPLIRTYAAAG--RTSPVMLRRL 469
E F L+ ++A G + S +L RL
Sbjct: 493 ETFHSLLYSFARGGLVKESEAILSRL 518
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 108/263 (41%), Gaps = 37/263 (14%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N Y +++ +E + +K + ++M + S + +L+ Y + G E ++
Sbjct: 140 NEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELL 199
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVN-DISGAERVIEEMKRDGRVAADWTTFSNLASIYV 240
MK I P TYN + A A D G + EM+ +G + D T++ L S
Sbjct: 200 DRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEG-IQPDIVTYNTLLSACA 258
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
GL ++AE + + + DL+ Y L+ +G+ L +V
Sbjct: 259 IRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVC---------------- 302
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
DL G E SG + DI NV++ AYAK G ++ A + +
Sbjct: 303 -------------DLLG------EMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQM 343
Query: 361 RRRGADPNAKTWEIFSDYYLRNG 383
+ G PNA T+ + + + ++G
Sbjct: 344 QAAGCTPNANTYSVLLNLFGQSG 366
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/204 (19%), Positives = 85/204 (41%), Gaps = 3/204 (1%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELM 138
M G ++ + L+ AK I A F + + N TY LLN + +
Sbjct: 308 MASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGR 367
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
+ L +MK N + +N L+ ++ + G+ +++ + +M +I PD TY
Sbjct: 368 YDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEG 427
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
+ A A ++++ M + V + ++ + + +A L+E+A A +
Sbjct: 428 IIFACGKGGLHEDARKILQYMTANDIVPSS-KAYTGVIEAFGQAALYEEALVAFNTMHEV 486
Query: 259 NAHRDLSAYQFLITLYGQTGNLSE 282
++ + + L+ + + G + E
Sbjct: 487 GSNPSIETFHSLLYSFARGGLVKE 510
Score = 40.8 bits (94), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 72/163 (44%), Gaps = 4/163 (2%)
Query: 115 DLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP 174
D+ +SK Y ++ + + + E+A M E+ S F+SL+ +A+ G
Sbjct: 452 DIVPSSK---AYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLV 508
Query: 175 EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSN 234
++ AI+ + S I + T+N + A A + +M++ R D T
Sbjct: 509 KESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKS-RCDPDERTLEA 567
Query: 235 LASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQT 277
+ S+Y A L ++ +E++ + + Y ++ +YG+T
Sbjct: 568 VLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKT 610
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 149/348 (42%), Gaps = 11/348 (3%)
Query: 58 VGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP 117
V ++ LR R AL L + + G++ + +D + K + AE F +
Sbjct: 335 VSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMG 394
Query: 118 ETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE 175
+ N +TY L++ +C+ + A + L +M + L S P+NSL+ + K G
Sbjct: 395 KIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDIS 454
Query: 176 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 235
+ EM + P TY M + I+ A R+ EM G +A TF+ L
Sbjct: 455 AAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKG-IAPSIYTFTTL 513
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLA 293
S AGL A + E+ N + Y +I Y + G++S+ + + + +
Sbjct: 514 LSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGI 573
Query: 294 FPNTANISYLNMIQVLVNLKDLPGAEKCFKE--WESGCATYDIRVTNVMIGAYAKEGRLE 351
P+T SY +I L L K F + + C +I T ++ G + +EG+LE
Sbjct: 574 VPDT--YSYRPLIHGLC-LTGQASEAKVFVDGLHKGNCELNEICYTGLLHG-FCREGKLE 629
Query: 352 NAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
A + + +RG D + + + D L++ D KL L++ D G
Sbjct: 630 EALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRG 677
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 104/493 (21%), Positives = 174/493 (35%), Gaps = 139/493 (28%)
Query: 12 NIAKRSKKHLEEALYDRLFKKG--SSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRK 69
++ K K H E L+DR+ K G +DV+ ++ F + K DT
Sbjct: 376 SLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKL-------DT-------- 420
Query: 70 LYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL--PETSKNHLTYG 127
AL M G+ +V ++ K I AAE + ++ + +TY
Sbjct: 421 ----ALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYT 476
Query: 128 SLLNCYC------KEL-----MTEKAEA------------------------LLEKMKEL 152
SL+ YC K L MT K A L +M E
Sbjct: 477 SLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEW 536
Query: 153 NLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA 212
N+ + + +N ++ Y + G K ++EM I+PD+Y+Y + L S A
Sbjct: 537 NVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA 596
Query: 213 ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI- 271
+ ++ + + G + ++ L + G E+A +E+ R DL Y LI
Sbjct: 597 KVFVDGLHK-GNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLID 655
Query: 272 ---------TLYG-------------------------QTGNLSEVYRIWRSL--RLAFP 295
+G +TG+ E + IW + P
Sbjct: 656 GSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVP 715
Query: 296 N----TANIS------YLNMIQVLVN----LKDLPG--AEKCF----------------- 322
N TA I+ ++N +VL + + +P CF
Sbjct: 716 NEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVEL 775
Query: 323 -----KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 377
K + ATY N++I + ++GR+E A EL R G P+ T+ +
Sbjct: 776 HNAILKGLLANTATY-----NMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMIN 830
Query: 378 YYLRNGDMKLAVD 390
R D+K A++
Sbjct: 831 ELCRRNDVKKAIE 843
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/383 (18%), Positives = 147/383 (38%), Gaps = 9/383 (2%)
Query: 80 NMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP--ETSKNHLTYGSLLNCYCKEL 137
+ME G + + + +D + K Q + A DL + + +TY +L+ CK
Sbjct: 252 HMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQ 311
Query: 138 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 197
E ++++M L S +SL+ K G E+ +++ + + P+ + YN
Sbjct: 312 EFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYN 371
Query: 198 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 257
+ +L AE + + M + G D T+S L ++ G + A L E+ +
Sbjct: 372 ALIDSLCKGRKFHEAELLFDRMGKIGLRPND-VTYSILIDMFCRRGKLDTALSFLGEMVD 430
Query: 258 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 317
+ Y LI + + G++S + ++Y +++ + +
Sbjct: 431 TGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINK 490
Query: 318 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 377
A + + E I ++ + G + +A +L PN T+ + +
Sbjct: 491 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIE 550
Query: 378 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 437
Y GDM A + L++ + G VP + + R + A+ F++ L
Sbjct: 551 GYCEEGDMSKAFEFLKEMTEKG------IVPDTYSYRPLIHGLCLTGQASEAKVFVDGLH 604
Query: 438 KAVDDLGVEVFEPLIRTYAAAGR 460
K +L + L+ + G+
Sbjct: 605 KGNCELNEICYTGLLHGFCREGK 627
Score = 37.0 bits (84), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 45/110 (40%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N TY L+ +C++ E+A L+ +M + + + +++ + +K +
Sbjct: 786 NTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELW 845
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTT 231
M I PD YN + ++ A + EM R G + + T+
Sbjct: 846 NSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTS 895
Score = 34.7 bits (78), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 72/411 (17%), Positives = 139/411 (33%), Gaps = 61/411 (14%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y ++ C+ +A+ ++ M+ + +P+N L+ K + I +++
Sbjct: 230 YTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLA 289
Query: 186 ASSIMPDSYTYNVWMRALAAVNDI-------------------SGAERVIEEMKRDGR-- 224
+ PD TY + L V + + ++E +++ G+
Sbjct: 290 GKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIE 349
Query: 225 -------------VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 271
V+ + ++ L + F +AE + + Y LI
Sbjct: 350 EALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILI 409
Query: 272 TLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF-----KEWE 326
++ + G L + + Y ++I D+ AE K+ E
Sbjct: 410 DMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLE 469
Query: 327 SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 386
TY ++G Y +G++ A L +G P+ T+ R G ++
Sbjct: 470 PTVVTY-----TSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIR 524
Query: 387 LAVDCLEKAIDTGRGDGGKW--VPSSETIRTFMRHFEQEKDVDGAEGFLEIL--KKAVDD 442
AV + +W P+ T + + +E D+ A FL+ + K V D
Sbjct: 525 DAVKLFNEM--------AEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPD 576
Query: 443 LGVEVFEPLIRTYAAAGRTS--PVMLRRLKMEKVEVSEAS-KKLLEAICVE 490
+ PLI G+ S V + L E++E LL C E
Sbjct: 577 --TYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCRE 625
>sp|Q9LR67|PPR9_ARATH Pentatricopeptide repeat-containing protein At1g03560,
mitochondrial OS=Arabidopsis thaliana GN=At1g03560 PE=2
SV=1
Length = 660
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 101/238 (42%), Gaps = 36/238 (15%)
Query: 162 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 221
N+L+ + K G E++ + ++MK + I P YTYN M L + + AERV E M+
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVME- 249
Query: 222 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 281
GR+ D T++ + Y +AG +KA L+++E R D
Sbjct: 250 SGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEAD------------------ 291
Query: 282 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 341
I+Y+ MIQ D ++E + +++I
Sbjct: 292 -----------------KITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVI 334
Query: 342 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
G KEG+L + E R+G+ PN + + D Y ++G ++ A+ L + ID G
Sbjct: 335 GGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEG 392
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 129/303 (42%), Gaps = 14/303 (4%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLNCYCKELM 138
M++ G+ T+ ++ + +D+AE F ++ + +TY +++ YCK
Sbjct: 213 MKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQ 272
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTL----YAKTGHPEKIPAIIQEMKASSIMPDSY 194
T+KA +EK++++ + MT+ YA + + A+ QEM I +
Sbjct: 273 TQKA---MEKLRDMETRGHEADKITYMTMIQACYADSDFGSCV-ALYQEMDEKGIQVPPH 328
Query: 195 TYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE 254
+++ + L ++ V E M R G + ++ L Y ++G E A R L
Sbjct: 329 AFSLVIGGLCKEGKLNEGYTVFENMIRKGS-KPNVAIYTVLIDGYAKSGSVEDAIRLLHR 387
Query: 255 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 314
+ + D+ Y ++ + G + E + + R ++ Y ++I L
Sbjct: 388 MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGR 447
Query: 315 LPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA-RRRGADPNAKTW 372
+ AE+ F+E E GC T D N +I A+ K +++ A L +R G D T+
Sbjct: 448 VDEAERLFEEMSEKGC-TRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTY 506
Query: 373 EIF 375
I
Sbjct: 507 TIL 509
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 76/179 (42%), Gaps = 9/179 (5%)
Query: 79 ENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKE 136
ENM ++G V+ + +D AK ++ A + + + +TY ++N CK
Sbjct: 351 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 410
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 196
E+A + L +SM ++SL+ K G ++ + +EM DSY Y
Sbjct: 411 GRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCY 470
Query: 197 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE--KAERALK 253
N + A + A + + M+ + T++ L S G+F+ + E ALK
Sbjct: 471 NALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLS-----GMFKEHRNEEALK 524
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 86.3 bits (212), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 144/322 (44%), Gaps = 3/322 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
A +L ++M+K G+ V I +D + K Q +D A F +D + + +T+ SL++
Sbjct: 396 AFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLID 455
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
K + A + EKM + + +S+ + SL+ + G E I ++M + P
Sbjct: 456 GLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSP 515
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D N +M + + + EE+K R D ++S L ++AG +
Sbjct: 516 DLQLLNTYMDCMFKAGEPEKGRAMFEEIKAR-RFVPDARSYSILIHGLIKAGFANETYEL 574
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
++ + D AY +I + + G +++ Y++ ++ ++Y ++I L
Sbjct: 575 FYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAK 634
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
+ L A F+E +S ++ + + +I + K GR++ A + E ++G PN T
Sbjct: 635 IDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYT 694
Query: 372 WEIFSDYYLRNGDMKLAVDCLE 393
W D ++ ++ A+ C +
Sbjct: 695 WNSLLDALVKAEEINEALVCFQ 716
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/347 (18%), Positives = 145/347 (41%), Gaps = 39/347 (11%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
AL L + M+ ++ + + +D KV +D A +F ++ + +TY S++
Sbjct: 222 ALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIG 281
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK ++A + E +++ + +N+++ Y G ++ ++++ +A +P
Sbjct: 282 VLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIP 341
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV----------- 240
YN + L + + A +V EEMK+D A + +T++ L +
Sbjct: 342 SVIAYNCILTCLRKMGKVDEALKVFEEMKKDA--APNLSTYNILIDMLCRAGKLDTAFEL 399
Query: 241 -----EAGLF-------------------EKAERALKELENRNAHRDLSAYQFLITLYGQ 276
+AGLF ++A +E++ + D + LI G+
Sbjct: 400 RDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGK 459
Query: 277 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 336
G + + Y+++ + + T +I Y ++I+ N K +K+ + + D+++
Sbjct: 460 VGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQL 519
Query: 337 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
N + K G E + E + R P+A+++ I ++ G
Sbjct: 520 LNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAG 566
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 114/274 (41%), Gaps = 8/274 (2%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y +++ +CK KA LLE+MK + + + S++ AK ++ + +E K
Sbjct: 590 YNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 649
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 245
+ I + Y+ + V I A ++EE+ + G + + T+++L V+A
Sbjct: 650 SKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG-LTPNLYTWNSLLDALVKAEEI 708
Query: 246 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 305
+A + ++ + Y LI + ++ + W+ ++ + ISY M
Sbjct: 709 NEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTM 768
Query: 306 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
I L ++ A F +++ D N MI + R +A L E RRRG
Sbjct: 769 ISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828
Query: 366 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ KT + D +N DCLE+A G
Sbjct: 829 PIHNKTCVVLLDTLHKN-------DCLEQAAIVG 855
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 2/147 (1%)
Query: 79 ENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKE 136
E + ++G+ + LD + K + I+ A F + E + N +TYG L+N CK
Sbjct: 681 EELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKV 740
Query: 137 LMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 196
KA ++M++ + S++ + ++++ AK G+ + A+ KA+ +PDS Y
Sbjct: 741 RKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACY 800
Query: 197 NVWMRALAAVNDISGAERVIEEMKRDG 223
N + L+ N A + EE +R G
Sbjct: 801 NAMIEGLSNGNRAMDAFSLFEETRRRG 827
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 78/193 (40%), Gaps = 1/193 (0%)
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
++Q M+ P Y + A +AVN + ++M+ G F+ L +
Sbjct: 155 VVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELG-YEPTVHLFTTLIRGF 213
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
+ G + A L E+++ + D+ Y I +G+ G + ++ + +
Sbjct: 214 AKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDE 273
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
++Y +MI VL L A + F+ E N MI Y G+ + A L ER
Sbjct: 274 VTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLER 333
Query: 360 ARRRGADPNAKTW 372
R +G+ P+ +
Sbjct: 334 QRAKGSIPSVIAY 346
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 84/200 (42%), Gaps = 3/200 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A +L E M+ +G TV +D +AK+ +D A F + N + Y SL++
Sbjct: 606 AYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLID 665
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ K ++A +LE++ + L + +NSL+ K + Q MK P
Sbjct: 666 GFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTP 725
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ TY + + L V + A +EM++ G + +++ + S +AG +A
Sbjct: 726 NQVTYGILINGLCKVRKFNKAFVFWQEMQKQG-MKPSTISYTTMISGLAKAGNIAEAGAL 784
Query: 252 LKELENRNAHRDLSAYQFLI 271
+ D + Y +I
Sbjct: 785 FDRFKANGGVPDSACYNAMI 804
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 85.5 bits (210), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 118/277 (42%), Gaps = 3/277 (1%)
Query: 101 AKVQGIDAAENYFVDL--PETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSS 158
AK+ D + +F D+ TY +++C CKE E A L E+MK L +
Sbjct: 238 AKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDT 297
Query: 159 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 218
+ +NS++ + K G + +EMK PD TYN + + E
Sbjct: 298 VTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYRE 357
Query: 219 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 278
MK +G + + ++S L + + G+ ++A + ++ + Y LI + G
Sbjct: 358 MKGNG-LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIG 416
Query: 279 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 338
NLS+ +R+ + ++Y +I L + + + AE+ F + ++ ++ N
Sbjct: 417 NLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYN 476
Query: 339 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 375
+I + K ++ A EL + RG P+ + F
Sbjct: 477 ALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTF 513
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 120/303 (39%), Gaps = 13/303 (4%)
Query: 138 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 197
M E+A KMK + + N L+ +AK G + + ++M + P +TYN
Sbjct: 207 MLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYN 266
Query: 198 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 257
+ + + D+ A + EEMK G V D T++++ + + G + +E+++
Sbjct: 267 IMIDCMCKEGDVEAARGLFEEMKFRGLV-PDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD 325
Query: 258 RNAHRDLSAYQFLITLYGQTGNLS---EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 314
D+ Y LI + + G L E YR + L PN +SY ++
Sbjct: 326 MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLK-PNV--VSYSTLVDAFCKEGM 382
Query: 315 LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 374
+ A K + + + +I A K G L +A L + G + N T+
Sbjct: 383 MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTA 442
Query: 375 FSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 434
D MK A + G+ D +P+ + + F + K++D A L
Sbjct: 443 LIDGLCDAERMKEAEELF------GKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLN 496
Query: 435 ILK 437
LK
Sbjct: 497 ELK 499
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/241 (19%), Positives = 98/241 (40%), Gaps = 3/241 (1%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
+N ++ K G E + +EMK ++PD+ TYN + V + EEMK
Sbjct: 265 YNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMK 324
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
D D T++ L + + + G +E++ ++ +Y L+ + + G +
Sbjct: 325 -DMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMM 383
Query: 281 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 340
+ + + +R +Y ++I + +L A + E +++ +
Sbjct: 384 QQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTAL 443
Query: 341 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 400
I R++ AEEL + G PN ++ +++ +M A++ L + GR
Sbjct: 444 IDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL--KGR 501
Query: 401 G 401
G
Sbjct: 502 G 502
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 108/245 (44%), Gaps = 4/245 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY +L++ C ++AE L KM + + +N+L+ + K + ++ ++
Sbjct: 436 NVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELL 495
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
E+K I PD Y ++ L ++ I A+ V+ EMK G + A+ ++ L Y +
Sbjct: 496 NELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG-IKANSLIYTTLMDAYFK 554
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
+G + L E++ + + + LI + +S+ + + F AN +
Sbjct: 555 SGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAA 614
Query: 302 -YLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
+ MI L + A F++ + G T++M G + K+G + A L+++
Sbjct: 615 IFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNF-KQGNVLEALALRDK 673
Query: 360 ARRRG 364
G
Sbjct: 674 MAEIG 678
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/195 (18%), Positives = 81/195 (41%), Gaps = 6/195 (3%)
Query: 229 WTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWR 288
+ F L S+ ++ G+ E+A + +++ + L+ + + G +V R ++
Sbjct: 192 FGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFK 251
Query: 289 SLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEG 348
+ A +Y MI + D+ A F+E + D N MI + K G
Sbjct: 252 DMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVG 311
Query: 349 RLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVP 408
RL++ E + +P+ T+ + + + G + + ++ + +G+G K P
Sbjct: 312 RLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREM----KGNGLK--P 365
Query: 409 SSETIRTFMRHFEQE 423
+ + T + F +E
Sbjct: 366 NVVSYSTLVDAFCKE 380
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 113/295 (38%), Gaps = 45/295 (15%)
Query: 214 RVIEEMKRDGRVAAD---WT-----------TFSNLASIYVEAGLFEKAERALKELENRN 259
RV+ E+K D ++A W+ ++ +A I A ++ A LKE+
Sbjct: 113 RVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSK 172
Query: 260 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 319
A D + L W + + P L VL++L L A
Sbjct: 173 A--DCDVFDVL----------------WSTRNVCVPGFGVFDAL--FSVLIDLGMLEEAI 212
Query: 320 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 379
+CF + + R N ++ +AK G+ ++ + + GA P T+ I D
Sbjct: 213 QCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCM 272
Query: 380 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 439
+ GD++ A E+ G VP + T + + F + +D F E +K
Sbjct: 273 CKEGDVEAARGLFEEMKFRG------LVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDM 326
Query: 440 VDDLGVEVFEPLIRTYAAAGRTSPVML---RRLKMEKVEVSEAS-KKLLEAICVE 490
+ V + LI + G+ P+ L R +K ++ + S L++A C E
Sbjct: 327 CCEPDVITYNALINCFCKFGKL-PIGLEFYREMKGNGLKPNVVSYSTLVDAFCKE 380
Score = 38.9 bits (89), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 74/178 (41%), Gaps = 4/178 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE---TSKNHLTYGSLL 130
L L + M++ + TV + +D + K + + A +YF + N + +++
Sbjct: 561 GLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMI 620
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
+ CK+ E A L E+M + L + SLM K G+ + A+ +M +
Sbjct: 621 DGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMK 680
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
D Y + L+ N + A +EEM +G + S L Y E G ++A
Sbjct: 681 LDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHY-ELGCIDEA 737
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 127/282 (45%), Gaps = 19/282 (6%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N T ++N CK+ EK L +++E + + +N+L++ Y+ G E+ ++
Sbjct: 234 NVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELM 293
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
M P YTYN + L A+ V EM R G ++ D TT+ +L +
Sbjct: 294 NAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG-LSPDSTTYRSLLMEACK 352
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G + E+ ++ +R+ DL + +++L+ ++GNL + + S++ A N+
Sbjct: 353 KGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVI 412
Query: 302 YL---------NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLEN 352
Y MI V +NL++ + + GCA D+ N ++ K L
Sbjct: 413 YTILIQGYCRKGMISVAMNLRN--------EMLQQGCAM-DVVTYNTILHGLCKRKMLGE 463
Query: 353 AEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
A++L R P++ T I D + + G+++ A++ +K
Sbjct: 464 ADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQK 505
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/347 (18%), Positives = 137/347 (39%), Gaps = 45/347 (12%)
Query: 97 LDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNL 154
+ L + +D A YF + E +++ Y L+ YC++ M A L +M +
Sbjct: 382 MSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGC 441
Query: 155 GFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAER 214
+ +N+++ K + + EM ++ PDSYT + + + ++ A
Sbjct: 442 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAME 501
Query: 215 VIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLY 274
+ ++MK + R+ D T++ L + + G + A+ ++ ++ +Y L+
Sbjct: 502 LFQKMK-EKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNAL 560
Query: 275 GQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDI 334
G+L+E +R+W + + N+K +
Sbjct: 561 CSKGHLAEAFRVWDEM-----------------ISKNIKP------------------TV 585
Query: 335 RVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
+ N MI Y + G + E E+ G P+ ++ ++R +M A ++K
Sbjct: 586 MICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKK 645
Query: 395 AIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVD 441
+ + G VP T + + F ++ + AE +L+K ++
Sbjct: 646 MEE----EQGGLVPDVFTYNSILHGFCRQNQMKEAE---VVLRKMIE 685
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 107/251 (42%), Gaps = 3/251 (1%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY ++L+ CK M +A+ L +M E L S L+ + K G+ + + Q+
Sbjct: 446 VTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQK 505
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
MK I D TYN + V DI A+ + +M + ++S L + G
Sbjct: 506 MKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSK-EILPTPISYSILVNALCSKG 564
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
+A R E+ ++N + +I Y ++GN S+ + ISY
Sbjct: 565 HLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYN 624
Query: 304 NMIQVLVNLKDLPGAEKCFK--EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
+I V +++ A K E E G D+ N ++ + ++ +++ AE + +
Sbjct: 625 TLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI 684
Query: 362 RRGADPNAKTW 372
RG +P+ T+
Sbjct: 685 ERGVNPDRSTY 695
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/238 (18%), Positives = 95/238 (39%), Gaps = 1/238 (0%)
Query: 162 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 221
N+L+ + G E + QE+ S + + YT N+ + AL + + +++
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 222 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 281
G V D T++ L S Y GL E+A + + + + Y +I + G
Sbjct: 264 KG-VYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYE 322
Query: 282 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 341
++ + + + + +Y +++ D+ EK F + S D+ + M+
Sbjct: 323 RAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMM 382
Query: 342 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ + G L+ A + G P+ + I Y R G + +A++ + + G
Sbjct: 383 SLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQG 440
Score = 38.9 bits (89), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 50/253 (19%), Positives = 96/253 (37%), Gaps = 25/253 (9%)
Query: 207 NDISGAERVIEEMK-RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR------- 258
ND++ +R ++++ + S + I V +G A+ L + R
Sbjct: 90 NDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLE 149
Query: 259 ----------NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN-MIQ 307
N + S + LI Y Q L E + + LR + T +I N +I
Sbjct: 150 IVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLR-SKGFTVSIDACNALIG 208
Query: 308 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 367
LV + + A ++E ++ N+M+ A K+G++E + + +G P
Sbjct: 209 SLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYP 268
Query: 368 NAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVD 427
+ T+ Y G M+ A + + G+G + I +H + E+
Sbjct: 269 DIVTYNTLISAYSSKGLMEEAFELMNAM--PGKGFSPGVYTYNTVINGLCKHGKYER--- 323
Query: 428 GAEGFLEILKKAV 440
E F E+L+ +
Sbjct: 324 AKEVFAEMLRSGL 336
>sp|Q9LYZ9|PP362_ARATH Pentatricopeptide repeat-containing protein At5g02860
OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1
Length = 819
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 168/399 (42%), Gaps = 14/399 (3%)
Query: 30 FKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKT 89
F G D SV +L + K K E+ LK L K + AL+ + K+ ++
Sbjct: 111 FDSGQLD-SVLSELFEPFKDKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQS 169
Query: 90 VSDQ---AIHLDLVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLNCYCKELMTEKAEA 144
+ D AI + ++ K + +A N F L E S + +Y SL++ + +A
Sbjct: 170 MLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVN 229
Query: 145 LLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEMKASSIMPDSYTYNVWMRAL 203
+ +KM+E + + +N ++ ++ K G P KI +++++MK+ I PD+YTYN +
Sbjct: 230 VFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCC 289
Query: 204 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 263
+ A +V EEMK G + D T++ L +Y ++ ++A + L E+
Sbjct: 290 KRGSLHQEAAQVFEEMKAAG-FSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPS 348
Query: 264 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 323
+ Y LI+ Y + G L E + + +Y ++ + A F+
Sbjct: 349 IVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFE 408
Query: 324 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 383
E + +I N I Y G+ ++ + G P+ TW + +NG
Sbjct: 409 EMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNG 468
Query: 384 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ 422
M V + K + +VP ET T + + +
Sbjct: 469 -MDSEVSGVFKEMKR-----AGFVPERETFNTLISAYSR 501
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 130/308 (42%), Gaps = 10/308 (3%)
Query: 71 YYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSK------NHL 124
Y A+ + + ME+ G T+ + L++ K + N L E K +
Sbjct: 224 YREAVNVFKKMEEDGCKPTLITYNVILNVFGK---MGTPWNKITSLVEKMKSDGIAPDAY 280
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY +L+ C + + ++A + E+MK + + +N+L+ +Y K+ P++ ++ EM
Sbjct: 281 TYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEM 340
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ P TYN + A A + A + +M G D T++ L S + AG
Sbjct: 341 VLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKG-TKPDVFTYTTLLSGFERAGK 399
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
E A +E+ N ++ + I +YG G +E+ +I+ + + + +++
Sbjct: 400 VESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNT 459
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
++ V FKE + + N +I AY++ G E A + R G
Sbjct: 460 LLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAG 519
Query: 365 ADPNAKTW 372
P+ T+
Sbjct: 520 VTPDLSTY 527
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 126/323 (39%), Gaps = 8/323 (2%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
T + TY +LL+ + + E A ++ E+M+ + FN+ + +Y G ++
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMM 439
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
I E+ + PD T+N + S V +EMKR G V + TF+ L S
Sbjct: 440 KIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP-ERETFNTLISA 498
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
Y G FE+A + + + DLS Y ++ + G + ++ +
Sbjct: 499 YSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPN 558
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
++Y +++ N K++ +E SG + ++ +K L AE
Sbjct: 559 ELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFS 618
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 418
+ RG P+ T Y R + A L+ + G + PS T + M
Sbjct: 619 ELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERG------FTPSMATYNSLMY 672
Query: 419 HFEQEKDVDGAEGFL-EILKKAV 440
+ D +E L EIL K +
Sbjct: 673 MHSRSADFGKSEEILREILAKGI 695
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 109/257 (42%), Gaps = 1/257 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY ++L + M E++E +L +M++ + + + SL+ YA + ++ +E+
Sbjct: 526 TYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEV 585
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ I P + + + + + AER E+K G + D TT +++ SIY +
Sbjct: 586 YSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERG-FSPDITTLNSMVSIYGRRQM 644
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
KA L ++ R ++ Y L+ ++ ++ + + I R + ISY
Sbjct: 645 VAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNT 704
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+I + A + F E + D+ N IG+YA + E A + + G
Sbjct: 705 VIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHG 764
Query: 365 ADPNAKTWEIFSDYYLR 381
PN T+ D Y +
Sbjct: 765 CRPNQNTYNSIVDGYCK 781
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 129/329 (39%), Gaps = 14/329 (4%)
Query: 135 KELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSY 194
KE A + ++E + SL++ +A +G + + ++M+ P
Sbjct: 185 KEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLI 244
Query: 195 TYNVWMRALAAV----NDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
TYNV + + N I+ ++E+MK DG +A D T++ L + L ++A +
Sbjct: 245 TYNVILNVFGKMGTPWNKITS---LVEKMKSDG-IAPDAYTYNTLITCCKRGSLHQEAAQ 300
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
+E++ D Y L+ +YG++ E ++ + L + + ++Y ++I
Sbjct: 301 VFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYA 360
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
L A + + D+ ++ + + G++E+A + E R G PN
Sbjct: 361 RDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNIC 420
Query: 371 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 430
T+ F Y G + ++ G P T T + F Q
Sbjct: 421 TFNAFIKMYGNRGKFTEMMKIFDEINVCG------LSPDIVTWNTLLAVFGQNGMDSEVS 474
Query: 431 GFLEILKKAVDDLGVEVFEPLIRTYAAAG 459
G + +K+A E F LI Y+ G
Sbjct: 475 GVFKEMKRAGFVPERETFNTLISAYSRCG 503
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 94/214 (43%), Gaps = 3/214 (1%)
Query: 99 LVAKVQGIDAAENYFVDLPET--SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGF 156
+ +K + AE F +L E S + T S+++ Y + M KA +L+ MKE
Sbjct: 603 VCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTP 662
Query: 157 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
S +NSLM +++++ K I++E+ A I PD +YN + A + A R+
Sbjct: 663 SMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIF 722
Query: 217 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 276
EM+ G + D T++ Y +FE+A ++ + + + Y ++ Y +
Sbjct: 723 SEMRNSG-IVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCK 781
Query: 277 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
E LR P+ L +++ +V
Sbjct: 782 LNRKDEAKLFVEDLRNLDPHAPKGEDLRLLERIV 815
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 164/391 (41%), Gaps = 43/391 (10%)
Query: 25 LYDRLFKKG--SSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENME 82
L DR+ + G ++V+ L KS + E+ L+K+ +RK+ A+K S ++
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL---LRKMEERKIKLDAVKYSIIID 255
Query: 83 KRGMNKTVS-DQAIHLDLVAKVQGIDAAENYFVDLP----------------------ET 119
G+ K S D A +L +++G A + L +
Sbjct: 256 --GLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI 313
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
+ + + + +L++C+ KE +AE L ++M + + ++ + SL+ + K +K
Sbjct: 314 TPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANH 373
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
++ M + P+ T+N+ + N I + +M G V AD T++ L +
Sbjct: 374 MLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG-VVADTVTYNTLIQGF 432
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
E G E A+ +E+ +R D+ +Y+ L+ G + I+ + + +
Sbjct: 433 CELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKS-KMELD 491
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY------DIRVTNVMIGAYAKEGRLENA 353
I N+I + + A K W+ C+ D++ N+MIG K+G L A
Sbjct: 492 IGIYNII-----IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA 546
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNGD 384
+ L + G PN T+ I +L GD
Sbjct: 547 DLLFRKMEEDGHSPNGCTYNILIRAHLGEGD 577
Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 114/276 (41%), Gaps = 7/276 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TYG +L CK T A LL KM+E + ++ ++ ++ K G + +
Sbjct: 211 NEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLF 270
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYV 240
EM+ D Y +R +++ +M KR ++ D FS L +V
Sbjct: 271 NEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR--KITPDVVAFSALIDCFV 328
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTA 298
+ G +AE KE+ R D Y LI + + L + + + + PN
Sbjct: 329 KEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIR 388
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+ L NL D G E F++ D N +I + + G+LE A+EL +
Sbjct: 389 TFNILINGYCKANLID-DGLEL-FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQ 446
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
R P+ +++I D NG+ + A++ EK
Sbjct: 447 EMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEK 482
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/349 (19%), Positives = 138/349 (39%), Gaps = 11/349 (3%)
Query: 114 VDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGH 173
++L + N T ++NC C+ A + + K+ +L ++ F++L+ G
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157
Query: 174 PEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFS 233
+ ++ M P T N + L +S A +I+ M G + T+
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETG-FQPNEVTYG 216
Query: 234 NLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 293
+ + ++G A L+++E R D Y +I + G+L + ++ + +
Sbjct: 217 PVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 276
Query: 294 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
I Y +I+ K ++ T D+ + +I + KEG+L A
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREA 336
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETI 413
EEL + +RG P+ T+ D + + + A L+ + G G P+ T
Sbjct: 337 EELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG------PNIRTF 390
Query: 414 RTFMRHFEQEKDV-DGAEGFLEI-LKKAVDDLGVEVFEPLIRTYAAAGR 460
+ + + + DG E F ++ L+ V D + LI+ + G+
Sbjct: 391 NILINGYCKANLIDDGLELFRKMSLRGVVAD--TVTYNTLIQGFCELGK 437
Score = 38.9 bits (89), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 61/335 (18%), Positives = 117/335 (34%), Gaps = 42/335 (12%)
Query: 159 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 218
+ F+ L ++ A+T + + + ++M+ I + YT ++ + +S A + +
Sbjct: 73 IDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGK 132
Query: 219 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 278
+ + G D TFS L + G +A + + L L+ G
Sbjct: 133 IIKLG-YEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNG 191
Query: 279 NLSE-VYRIWRSLRLAF-PNTAN---------------------------------ISYL 303
+S+ V I R + F PN + Y
Sbjct: 192 KVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYS 251
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
+I L L A F E E DI + +I + GR ++ +L +R
Sbjct: 252 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR 311
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQE 423
P+ + D +++ G ++ A + ++ I G P + T + + F +E
Sbjct: 312 KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG------ISPDTVTYTSLIDGFCKE 365
Query: 424 KDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAA 458
+D A L+++ + F LI Y A
Sbjct: 366 NQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKA 400
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 120/276 (43%), Gaps = 10/276 (3%)
Query: 159 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 218
+P +L+ + + G K I++ ++ S +PD TYNV + +I+ A V++
Sbjct: 138 IPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDR 197
Query: 219 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 278
M V+ D T++ + ++G ++A L + R+ + D+ Y LI +
Sbjct: 198 MS----VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDS 253
Query: 279 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 338
+ ++ +R ++Y ++ + L A K + S ++ N
Sbjct: 254 GVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHN 313
Query: 339 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 398
+++ + GR +AE+L R+G P+ T+ I ++ R G + A+D LEK
Sbjct: 314 IILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQH 373
Query: 399 GRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 434
G P+S + + F +EK +D A +LE
Sbjct: 374 G------CQPNSLSYNPLLHGFCKEKKMDRAIEYLE 403
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 114/284 (40%), Gaps = 36/284 (12%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY L+ C++ A LL++M++ + +N L+ K G ++ + +
Sbjct: 240 ITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLND 299
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M +S P+ T+N+ +R++ + AE+++ +M R G + TF+ L + G
Sbjct: 300 MPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG-FSPSVVTFNILINFLCRKG 358
Query: 244 LFEKA--------------------------------ERALKELE---NRNAHRDLSAYQ 268
L +A +RA++ LE +R + D+ Y
Sbjct: 359 LLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYN 418
Query: 269 FLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESG 328
++T + G + + I L + I+Y +I L A K E +
Sbjct: 419 TMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK 478
Query: 329 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
D + ++G ++EG+++ A + R G PNA T+
Sbjct: 479 DLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTF 522
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/279 (19%), Positives = 124/279 (44%), Gaps = 10/279 (3%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +++ YCK A ++L++M ++ + +N+++ +G ++ ++
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDR 229
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M PD TY + + A + + A ++++EM RD D T++ L + + G
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM-RDRGCTPDVVTYNVLVNGICKEG 288
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS-LRLAFPNTANISY 302
++A + L ++ + ++ + ++ TG + ++ LR F + ++
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF--SPSVVT 346
Query: 303 LNMIQVLVNLKDLPG--AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
N++ + K L G + K + GC + N ++ + KE +++ A E ER
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSY-NPLLHGFCKEKKMDRAIEYLERM 405
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
RG P+ T+ ++G ++ AV+ L + G
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 3/185 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A KL +M ++G + +V I ++ + + + A + +P+ N L+Y LL+
Sbjct: 328 AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLH 387
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+CKE ++A LE+M + +N+++T K G E I+ ++ + P
Sbjct: 388 GFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP 447
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
TYN + LA A ++++EM R + D T+S+L G ++A +
Sbjct: 448 VLITYNTVIDGLAKAGKTGKAIKLLDEM-RAKDLKPDTITYSSLVGGLSREGKVDEAIKF 506
Query: 252 LKELE 256
E E
Sbjct: 507 FHEFE 511
Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 70/148 (47%), Gaps = 1/148 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY ++L CK+ E A +L ++ + +N+++ AK G K ++ E
Sbjct: 415 VTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDE 474
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+A + PD+ TY+ + L+ + A + E +R G + + TF+++ ++
Sbjct: 475 MRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG-IRPNAVTFNSIMLGLCKSR 533
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLI 271
++A L + NR + ++Y LI
Sbjct: 534 QTDRAIDFLVFMINRGCKPNETSYTILI 561
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 161/368 (43%), Gaps = 15/368 (4%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY L++ C + EKA LL +M E L + + +N+L+ Y K G E +++ M
Sbjct: 360 TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM 419
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
++ + P++ TYN ++ N + A V+ +M + +V D T+++L +G
Sbjct: 420 ESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKM-LERKVLPDVVTYNSLIDGQCRSGN 477
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
F+ A R L + +R D Y +I ++ + E ++ SL N + Y
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+I + A ++ S + N +I +G+L+ A L+E+ + G
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 597
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 424
P T I L++GD A ++ + +G P + T TF++ + +E
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTK------PDAHTYTTFIQTYCREG 651
Query: 425 DVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPV--MLRRLKMEKVEVSEAS-- 480
+ AE + +++ + + LI+ Y G+T+ +L+R++ E S+ +
Sbjct: 652 RLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFL 711
Query: 481 ---KKLLE 485
K LLE
Sbjct: 712 SLIKHLLE 719
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/343 (20%), Positives = 129/343 (37%), Gaps = 55/343 (16%)
Query: 55 KWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFV 114
+W + L K A L +++E++G+N V
Sbjct: 497 QWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNV------------------------ 532
Query: 115 DLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP 174
+ Y +L++ YCK ++A +LEKM N +S+ FN+L+ G
Sbjct: 533 ---------VMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKL 583
Query: 175 EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSN 234
++ + ++M + P T + + L D A ++M G D T++
Sbjct: 584 KEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG-TKPDAHTYTT 642
Query: 235 LASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF 294
Y G AE + ++ DL Y LI YG G + + + + +R
Sbjct: 643 FIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG 702
Query: 295 PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAE 354
+ ++L++I+ L+ +K G +K G ++N+M +
Sbjct: 703 CEPSQHTFLSLIKHLLEMK--YGKQK-------GSEPELCAMSNMM--------EFDTVV 745
Query: 355 ELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
EL E+ PNAK++E G++++A EK D
Sbjct: 746 ELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVA----EKVFD 784
Score = 45.4 bits (106), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 68/376 (18%), Positives = 139/376 (36%), Gaps = 31/376 (8%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
Y +LLN + + ++ + + +M E + + +N ++ Y K G+ E+ + ++
Sbjct: 185 CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI 244
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ + PD +TY + D+ A +V EM G + +++L A
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKG-CRRNEVAYTHLIHGLCVARR 303
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
++A ++++ + Y LI + SE + + + +Y
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+I L + A + + ++ N +I Y K G +E+A ++ E R
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID--------------TGRGDGGKW---- 406
PN +T+ Y ++ K A+ L K ++ G+ G +
Sbjct: 424 LSPNTRTYNELIKGYCKSNVHK-AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 407 -----------VPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 455
VP T + + + K V+ A + L++ + V ++ LI Y
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542
Query: 456 AAAGRTSPVMLRRLKM 471
AG+ L KM
Sbjct: 543 CKAGKVDEAHLMLEKM 558
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/237 (18%), Positives = 87/237 (36%), Gaps = 55/237 (23%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL--PETSKNHLTYGSLLN 131
A L E M K G+ TVS I + + K D A + F + T + TY + +
Sbjct: 586 ATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQ 645
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGH------------------ 173
YC+E AE ++ KM+E + ++SL+ Y G
Sbjct: 646 TYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEP 705
Query: 174 ------------------------PE-----------KIPAIIQEMKASSIMPDSYTYNV 198
PE + ++++M S+ P++ +Y
Sbjct: 706 SQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEK 765
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 255
+ + V ++ AE+V + M+R+ ++ F+ L S + +A + + ++
Sbjct: 766 LILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDM 822
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 127/287 (44%), Gaps = 8/287 (2%)
Query: 108 AAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLM 165
+A+ Y ++ E N + L+N YCK+ +A + M + + + + LM
Sbjct: 540 SADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLM 599
Query: 166 TLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRV 225
K + I +EM+ I PD ++Y V + + + ++ A + +EM +G +
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG-L 658
Query: 226 AADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 285
+ ++ L + +G EKA+ L E+ + H + Y +I Y ++G+L+E +R
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFR 718
Query: 286 IWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 345
++ ++L + Y ++ L D+ A F + GCA+ N +I
Sbjct: 719 LFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCAS-STAPFNALINWVF 777
Query: 346 KEGRLENAEELKER----ARRRGADPNAKTWEIFSDYYLRNGDMKLA 388
K G+ E E+ R + R PN T+ I DY + G+++ A
Sbjct: 778 KFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAA 824
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 127/330 (38%), Gaps = 71/330 (21%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y SL+ YC+E + LL +MK+ N+ S + +++ +G + I++EM
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI 444
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL---------- 235
AS P+ Y ++ + A RV++EMK G +A D +++L
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG-IAPDIFCYNSLIIGLSKAKRM 503
Query: 236 -------------------------ASIYVEAGLFEKAERALKEL--------------- 255
S Y+EA F A++ +KE+
Sbjct: 504 DEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGL 563
Query: 256 -----------ENRNAHR---------DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
E +A+R D Y L+ + + + I+R +R
Sbjct: 564 INEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI 623
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEE 355
SY +I L ++ A F E T ++ + N+++G + + G +E A+E
Sbjct: 624 APDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKE 683
Query: 356 LKERARRRGADPNAKTWEIFSDYYLRNGDM 385
L + +G PNA T+ D Y ++GD+
Sbjct: 684 LLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 90/460 (19%), Positives = 181/460 (39%), Gaps = 96/460 (20%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
ALKL E+M +G+ + +D + K++ ++ A++ V++ S ++ TY L++
Sbjct: 261 ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLID 320
Query: 132 --------------------------------CYC---KELMTEKAEALLEKMKELNLGF 156
C C KE + EKA+AL + M L
Sbjct: 321 GLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIP 380
Query: 157 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
+ + SL+ Y + + + ++ EMK +I+ YTY ++ + + D+ GA ++
Sbjct: 381 QAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIV 440
Query: 217 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 276
+EM G + ++ L +++ F A R LKE++ + D+ Y LI +
Sbjct: 441 KEMIASG-CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499
Query: 277 TGNLSE-----VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESG-- 328
+ E V + L+ PN +Y I + + A+K KE E G
Sbjct: 500 AKRMDEARSFLVEMVENGLK---PNA--FTYGAFISGYIEASEFASADKYVKEMRECGVL 554
Query: 329 ----------------------CATY----------DIRVTNVMIGAYAKEGRLENAEEL 356
C+ Y D + V++ K ++++AEE+
Sbjct: 555 PNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEI 614
Query: 357 KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTF 416
R +G P+ ++ + + + + G+M+ A ++ ++ G P+
Sbjct: 615 FREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG------LTPNVIIYNML 668
Query: 417 MRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYA 456
+ F + +++ A K+ +D++ V+ P TY
Sbjct: 669 LGGFCRSGEIEKA-------KELLDEMSVKGLHPNAVTYC 701
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 143/337 (42%), Gaps = 13/337 (3%)
Query: 106 IDAAENYFVDL--PETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNS 163
+D AE F ++ + + +YG L+N + K +KA ++ ++M E L + + +N
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 164 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
L+ + ++G EK ++ EM + P++ TY + D++ A R+ +EMK G
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727
Query: 224 RVAADWTTFSNLASIYVEAGLFEKAERALKEL--ENRNAHRDLSAYQFLITL---YGQTG 278
V D ++ L ERA+ + + + LI +G+T
Sbjct: 728 LV-PDSFVYTTLVD---GCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTE 783
Query: 279 NLSEVY-RIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVT 337
+EV R+ F +++Y MI L +L A++ F + ++ +
Sbjct: 784 LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 843
Query: 338 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
++ Y K GR + + A G +P+ + + + +L+ G A+ +++
Sbjct: 844 TSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFA 903
Query: 398 TGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 434
D G + S T R + F + +++ AE +E
Sbjct: 904 KNAVDDGCKL-SISTCRALLSGFAKVGEMEVAEKVME 939
Score = 36.6 bits (83), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELN-----LGFSSMPFNSLMTLYAKTGHPEK 176
+H+ Y ++N + KE MT KA L+++M N S +L++ +AK G E
Sbjct: 874 DHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEV 933
Query: 177 IPAIIQEMKASSIMPDSYT 195
+++ M +PDS T
Sbjct: 934 AEKVMENMVRLQYIPDSAT 952
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/388 (21%), Positives = 149/388 (38%), Gaps = 55/388 (14%)
Query: 18 KKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKL 77
K HL + D LF + + ++ + F L + + LY+ L+
Sbjct: 124 KAHLPDKAVD-LFHRMVDEFRCKRSVKSF------------NSVLNVIINEGLYHRGLEF 170
Query: 78 SENMEKRGMNKTVSDQAIHLDLV----AKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
+ + MN +S + +LV K++ +D A F +PE + TY +L++
Sbjct: 171 YDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMD 230
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CKE ++A LL++M+ S + +N L+ K G ++ ++ M +P
Sbjct: 231 GLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVP 290
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ TYN + L + A ++E M + D T+ L + V+ A R
Sbjct: 291 NEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPND-VTYGTLINGLVKQRRATDAVRL 349
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
L +E R H + Y LI+ + G E +WR
Sbjct: 350 LSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWR----------------------- 386
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
K E GC +I V +V++ +EG+ A+E+ R G PNA T
Sbjct: 387 -----------KMAEKGCKP-NIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYT 434
Query: 372 WEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ + + G + AV ++ TG
Sbjct: 435 YSSLMKGFFKTGLCEEAVQVWKEMDKTG 462
Score = 72.4 bits (176), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 110/257 (42%), Gaps = 4/257 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TYG+L+N K+ A LL M+E + ++ L++ K G E+ ++
Sbjct: 326 NDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLW 385
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
++M P+ Y+V + L + A+ ++ M G + +T +S+L + +
Sbjct: 386 RKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYT-YSSLMKGFFK 444
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
GL E+A + KE++ R+ Y LI G + E +W + ++
Sbjct: 445 TGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVA 504
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEW---ESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
Y ++I+ L + + A K + E E + D+ N+++ + + A +L
Sbjct: 505 YSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLN 564
Query: 359 RARRRGADPNAKTWEIF 375
RG DP+ T F
Sbjct: 565 SMLDRGCDPDVITCNTF 581
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/335 (18%), Positives = 135/335 (40%), Gaps = 18/335 (5%)
Query: 138 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 197
++EK KM LG S++ +S++ YA +G + + ++ ++ + + ++
Sbjct: 59 ISEKMFKSAPKMGSFKLGDSTL--SSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFI 116
Query: 198 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 257
V RA + A + M + R +F+++ ++ + GL+ + + N
Sbjct: 117 VVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVN 176
Query: 258 RNAHRDLS----AYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVN 311
N + ++S ++ +I + + ++R + R P+ +Y ++ L
Sbjct: 177 SNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPD--GYTYCTLMDGLCK 234
Query: 312 LKDLPGAEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
+ + A E +S GC+ + + NV+I K+G L +L + +G PN
Sbjct: 235 EERIDEAVLLLDEMQSEGCSPSPV-IYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEV 293
Query: 371 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 430
T+ G + AV LE+ + + K +P+ T T + +++ A
Sbjct: 294 TYNTLIHGLCLKGKLDKAVSLLERMVSS------KCIPNDVTYGTLINGLVKQRRATDAV 347
Query: 431 GFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVM 465
L +++ L ++ LI G+ M
Sbjct: 348 RLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAM 382
>sp|Q9SIC9|PP178_ARATH Pentatricopeptide repeat-containing protein At2g31400,
chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2
SV=1
Length = 918
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 122/271 (45%), Gaps = 5/271 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ +T+ SLL + + E A L ++M + +N+L+ K G + I+
Sbjct: 338 DRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEIL 397
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+M IMP+ +Y+ + A A + EM+ G +A D +++ L SIY +
Sbjct: 398 AQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLG-IALDRVSYNTLLSIYTK 456
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR--LAFPNTAN 299
G E+A L+E+ + +D+ Y L+ YG+ G EV +++ ++ PN
Sbjct: 457 VGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNL-- 514
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
++Y +I A + F+E++S D+ + + +I A K G + +A L +
Sbjct: 515 LTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDE 574
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
+ G PN T+ D + R+ M + D
Sbjct: 575 MTKEGISPNVVTYNSIIDAFGRSATMDRSAD 605
Score = 72.4 bits (176), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 96/211 (45%), Gaps = 3/211 (1%)
Query: 70 LYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP--ETSKNHLTYG 127
L+ A L + M R + + V LD + K +D A +P N ++Y
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYS 413
Query: 128 SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 187
++++ + K ++A L +M+ L + + +N+L+++Y K G E+ I++EM +
Sbjct: 414 TVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV 473
Query: 188 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 247
I D TYN + ++V EMKR+ V + T+S L Y + GL+++
Sbjct: 474 GIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKRE-HVLPNLLTYSTLIDGYSKGGLYKE 532
Query: 248 AERALKELENRNAHRDLSAYQFLITLYGQTG 278
A +E ++ D+ Y LI + G
Sbjct: 533 AMEIFREFKSAGLRADVVLYSALIDALCKNG 563
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 110/275 (40%), Gaps = 37/275 (13%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVN-DISGAERVIEEM 219
F++L++ Y ++G E+ ++ MK + P+ TYN + A + + +EM
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 220 KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGN 279
+R+G V D TF++L ++ GL+E A E+ NR +D+ +Y L+ + G
Sbjct: 331 QRNG-VQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 280 LSEVYRIWRSLRL--AFPNTAN---------------------------------ISYLN 304
+ + I + + PN + +SY
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNT 449
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
++ + + A +E S D+ N ++G Y K+G+ + +++ +R
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH 509
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
PN T+ D Y + G K A++ + G
Sbjct: 510 VLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAG 544
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 121 KNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI 180
K+ +TY +LL Y K+ ++ + + +MK ++ + + +++L+ Y+K G ++ I
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEI 536
Query: 181 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL----- 235
+E K++ + D Y+ + AL + A +I+EM ++G ++ + T++++
Sbjct: 537 FREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG-ISPNVVTYNSIIDAFG 595
Query: 236 -------ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 276
++ Y G + AL L +R +I L+GQ
Sbjct: 596 RSATMDRSADYSNGGSLPFSSSALSALTETEGNR-------VIQLFGQ 636
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 130/296 (43%), Gaps = 7/296 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N + L+N +CKE A+ + +++ + +L + + FN+L+ Y K G+ ++ +
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+M+ S PD +TY+ + AL N + GA + +EM + G + D F+ L +
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPND-VIFTTLIHGHSR 357
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G + + + +++ ++ D+ Y L+ + + G+L I + I+
Sbjct: 358 NGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKIT 417
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I D+ A + KE + D + ++ KEGR+ +AE
Sbjct: 418 YTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREML 477
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 417
R G P+ T+ + D + + GD + L++ + DG VPS T +
Sbjct: 478 RAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEM----QSDG--HVPSVVTYNVLL 527
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 132/313 (42%), Gaps = 3/313 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAA--ENYFVDLPETSKNHLTYGSLLN 131
A K+ + + KR + TV ++ KV +D + ++ T + TY +L+N
Sbjct: 259 AQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALIN 318
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CKE + A L ++M + L + + F +L+ +++ G + + Q+M + + P
Sbjct: 319 ALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQP 378
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D YN + D+ A +++ M R G + D T++ L + G E A
Sbjct: 379 DIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG-LRPDKITYTTLIDGFCRGGDVETALEI 437
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
KE++ D + L+ + G + + R R + A +++Y M+
Sbjct: 438 RKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCK 497
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
D K KE +S + NV++ K G+++NA+ L + G P+ T
Sbjct: 498 KGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDIT 557
Query: 372 WEIFSDYYLRNGD 384
+ + + R+ +
Sbjct: 558 YNTLLEGHHRHAN 570
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 74/161 (45%), Gaps = 1/161 (0%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +L++ +C+ E A + ++M + + + F++L+ K G ++E
Sbjct: 416 ITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALRE 475
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M + I PD TY + M A D ++++EM+ DG V + T++ L + + G
Sbjct: 476 MLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPS-VVTYNVLLNGLCKLG 534
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVY 284
+ A+ L + N D Y L+ + + N S+ Y
Sbjct: 535 QMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRY 575
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 146/337 (43%), Gaps = 24/337 (7%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
Y L++ CK AE L ++M L S + +N+L+ Y K G+PEK + +
Sbjct: 215 FIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRER 274
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
MKA I P T+N ++ L + AE V++EMK G V D TFS L Y
Sbjct: 275 MKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFV-PDAFTFSILFDGYSSN- 332
Query: 244 LFEKAERALKELENR-NAHRDLSAY--QFLITLYGQTGNLSEVYRIW-RSLRLAF-PNTA 298
EKAE AL E ++ ++AY L+ + G + + I R + PN
Sbjct: 333 --EKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPN-- 388
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+ Y MI DL GA + E D N +I + + G +ENAE+
Sbjct: 389 EVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVN 448
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 418
+ + +G P+ +T+ I Y R + D L++ D G +P+ + T +
Sbjct: 449 KMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNG------TMPNVVSYGTLIN 502
Query: 419 HFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 455
+ + A +I+K+ ++D GV P +R Y
Sbjct: 503 CLCKGSKLLEA----QIVKRDMEDRGV---SPKVRIY 532
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 116/278 (41%), Gaps = 1/278 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N T LLN CKE EKAE +L + L + + +N+++ Y + G I
Sbjct: 353 NAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKI 412
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+ M+ + PD YN +R + ++ AE+ + +MK G V+ T++ L Y
Sbjct: 413 EAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKG-VSPSVETYNILIGGYGR 471
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
F+K LKE+E+ ++ +Y LI + L E + R + +
Sbjct: 472 KYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRI 531
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I + + A + KE ++ N +I + G+L AE+L
Sbjct: 532 YNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEIS 591
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
R+G P+ T+ Y G+++ + E+ +G
Sbjct: 592 RKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSG 629
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 8/202 (3%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCY 133
+ L E M++ G+ T+ + + L K +GI+ E F ++ + L Y +L+CY
Sbjct: 618 CIALYEEMKRSGIKPTLKTYHLLISLCTK-EGIELTERLFGEM-SLKPDLLVYNGVLHCY 675
Query: 134 CKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDS 193
EKA L ++M E ++G +NSL+ K G ++ ++I EM A + P++
Sbjct: 676 AVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEA 735
Query: 194 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 253
TYN+ ++ V D A EM+ G + D + L S E ++AE +
Sbjct: 736 DTYNIIVKGHCEVKDYMSAYVWYREMQEKGFL-LDVCIGNELVSGLKEEWRSKEAEIVIS 794
Query: 254 ELENR-----NAHRDLSAYQFL 270
E+ R DLSA + L
Sbjct: 795 EMNGRMLGDVTVDEDLSATEKL 816
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 109/258 (42%), Gaps = 7/258 (2%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
T N ++YG+L+NC CK +A+ + M++ + +N L+ G E
Sbjct: 490 TMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAF 549
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+EM I + TYN + L+ +S AE ++ E+ R G + D T+++L S
Sbjct: 550 RFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKG-LKPDVFTYNSLISG 608
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG-NLSEVYRIWRSLRLAFPNT 297
Y AG ++ +E++ L Y LI+L + G L+E R++ + L P+
Sbjct: 609 YGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTE--RLFGEMSLK-PDL 665
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
+ Y ++ D+ A K+ D N +I K G+L L
Sbjct: 666 --LVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLI 723
Query: 358 ERARRRGADPNAKTWEIF 375
+ R +P A T+ I
Sbjct: 724 DEMNAREMEPEADTYNII 741
Score = 32.7 bits (73), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 61/155 (39%), Gaps = 13/155 (8%)
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y IQ V L D+ + F + + + NV+I K R+ +AE+L +
Sbjct: 182 YGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEML 241
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
R P+ T+ D Y + G+ + + E R PS T T ++
Sbjct: 242 ARRLLPSLITYNTLIDGYCKAGNPEKSFKVRE------RMKADHIEPSLITFNTLLKGLF 295
Query: 422 QEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYA 456
+ V+ AE L K + DLG F P T++
Sbjct: 296 KAGMVEDAENVL----KEMKDLG---FVPDAFTFS 323
>sp|Q8L844|PP413_ARATH Pentatricopeptide repeat-containing protein At5g42310,
mitochondrial OS=Arabidopsis thaliana GN=At5g42310 PE=2
SV=1
Length = 709
Score = 82.4 bits (202), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 127/279 (45%), Gaps = 9/279 (3%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
T S+++ T +AEAL E++++ + + +N+L+ Y KTG + +++ EM
Sbjct: 306 TLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEM 365
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
+ + PD +TY++ + A A V++EM+ G V + FS L + + + G
Sbjct: 366 EKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEA-GDVQPNSFVFSRLLAGFRDRGE 424
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
++K + LKE+++ D Y +I +G+ L + + +++
Sbjct: 425 WQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNT 484
Query: 305 MIQVLVNLKDLPGAEKCFKEWES----GCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
+I AE+ F+ E CAT N+MI +Y + R ++ + L +
Sbjct: 485 LIDCHCKHGRHIVAEEMFEAMERRGCLPCAT----TYNIMINSYGDQERWDDMKRLLGKM 540
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 399
+ +G PN T D Y ++G A++CLE+ G
Sbjct: 541 KSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVG 579
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 133/319 (41%), Gaps = 7/319 (2%)
Query: 141 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 200
KA LL + L + S+++ A +G + A+ +E++ S I P + YN +
Sbjct: 287 KALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALL 346
Query: 201 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 260
+ + AE ++ EM++ G V+ D T+S L YV AG +E A LKE+E +
Sbjct: 347 KGYVKTGPLKDAESMVSEMEKRG-VSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDV 405
Query: 261 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 320
+ + L+ + G + +++ + ++ Y +I L A
Sbjct: 406 QPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMT 465
Query: 321 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 380
F S D N +I + K GR AEE+ E RRG P A T+ I + Y
Sbjct: 466 TFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSY- 524
Query: 381 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 440
GD + D +++ + + G +P+ T T + + + + A LE +K
Sbjct: 525 --GDQE-RWDDMKRLLGKMKSQG--ILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVG 579
Query: 441 DDLGVEVFEPLIRTYAAAG 459
++ LI YA G
Sbjct: 580 LKPSSTMYNALINAYAQRG 598
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 102/237 (43%), Gaps = 5/237 (2%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
S + TY L++ Y E A +L++M+ ++ +S F+ L+ + G +K
Sbjct: 370 VSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTF 429
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
+++EMK+ + PD YNV + N + A + M +G + D T++ L
Sbjct: 430 QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEG-IEPDRVTWNTLIDC 488
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPN 296
+ + G AE + +E R + Y +I YG ++ R+ ++ PN
Sbjct: 489 HCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPN 548
Query: 297 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
+++ ++ V A +C +E +S + N +I AYA+ G E A
Sbjct: 549 V--VTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQA 603
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 145/386 (37%), Gaps = 68/386 (17%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKE---------LNLGFSSMP----FNSLMTL--- 167
LTY +L+ + EKA L+ KM++ +L S+ +S+M L
Sbjct: 198 LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLY 257
Query: 168 ---------------------YAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV 206
+AK+G P K ++ +A+ + + T + ALA
Sbjct: 258 KEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADS 317
Query: 207 NDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSA 266
AE + EE+++ G + ++ L YV+ G + AE + E+E R D
Sbjct: 318 GRTLEAEALFEELRQSG-IKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHT 376
Query: 267 YQFLITLYGQTGNLSEVYRIWRSLRLAF---------PNTANISYLNMIQVLVNLKDLPG 317
Y LI Y G W S R+ PN+ S ++L +D
Sbjct: 377 YSLLIDAYVNAGR-------WESARIVLKEMEAGDVQPNSFVFS-----RLLAGFRDRGE 424
Query: 318 AEKCF---KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 374
+K F KE +S D + NV+I + K L++A +R G +P+ TW
Sbjct: 425 WQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNT 484
Query: 375 FSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 434
D + ++G +A + E G +P + T + + ++ D + L
Sbjct: 485 LIDCHCKHGRHIVAEEMFEAMERRG------CLPCATTYNIMINSYGDQERWDDMKRLLG 538
Query: 435 ILKKAVDDLGVEVFEPLIRTYAAAGR 460
+K V L+ Y +GR
Sbjct: 539 KMKSQGILPNVVTHTTLVDVYGKSGR 564
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 105/244 (43%), Gaps = 7/244 (2%)
Query: 142 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 201
A A++ +++ NL FS S+ L G EK+ + ++ P TYN +
Sbjct: 150 AYAVVSWLQKHNLCFSYELLYSI--LIHALGRSEKLYEAFLLSQKQTLTP--LTYNALIG 205
Query: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE--RALKELENRN 259
A A NDI A +I +M++DG +D+ +S + + + R KE+E
Sbjct: 206 ACARNNDIEKALNLIAKMRQDG-YQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDK 264
Query: 260 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 319
D+ +I + ++G+ S+ ++ + + + +++I L + AE
Sbjct: 265 LELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAE 324
Query: 320 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 379
F+E R N ++ Y K G L++AE + +RG P+ T+ + D Y
Sbjct: 325 ALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAY 384
Query: 380 LRNG 383
+ G
Sbjct: 385 VNAG 388
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%)
Query: 126 YGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK 185
Y +L+N Y + ++E+A M L S + NSL+ + + + A++Q MK
Sbjct: 587 YNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMK 646
Query: 186 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
+ + PD TY M+AL V+ V EEM G
Sbjct: 647 ENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSG 684
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +T+ +L++ Y K A LE+MK + L SS +N+L+ YA+ G E+
Sbjct: 548 NVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAF 607
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+ M + + P N + A + A V++ MK +G V D T++ L +
Sbjct: 608 RVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENG-VKPDVVTYTTLMKALIR 666
Query: 242 AGLFEKAERALKEL 255
F+K +E+
Sbjct: 667 VDKFQKVPVVYEEM 680
Score = 37.7 bits (86), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/206 (18%), Positives = 78/206 (37%), Gaps = 37/206 (17%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY ++N Y + + + LL KMK + + + +L+ +Y K+G ++EM
Sbjct: 516 TYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEM 575
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
K+ + P S YN + A Y + GL
Sbjct: 576 KSVGLKPSSTMYNALINA------------------------------------YAQRGL 599
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
E+A A + + + L A LI +G+ +E + + + ++ ++Y
Sbjct: 600 SEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTT 659
Query: 305 MIQVLVNLKDLPGAEKCFKEW-ESGC 329
+++ L+ + ++E SGC
Sbjct: 660 LMKALIRVDKFQKVPVVYEEMIMSGC 685
Score = 33.9 bits (76), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 35/69 (50%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
L SL+N + ++ +A A+L+ MKE + + + +LM + +K+P + +E
Sbjct: 620 LALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEE 679
Query: 184 MKASSIMPD 192
M S PD
Sbjct: 680 MIMSGCKPD 688
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 82.0 bits (201), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 126/274 (45%), Gaps = 5/274 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TYG ++N CK T+ A LL KM+ + + FN+++ K H + +
Sbjct: 224 NLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 283
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+EM+ I P+ TY+ + L + S A +++ +M + ++ + TF+ L +V+
Sbjct: 284 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI-EKKINPNLVTFNALIDAFVK 342
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTAN 299
G F +AE+ ++ R+ D+ Y L+ + L + +++ + + FP+
Sbjct: 343 EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDV-- 400
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
++Y +I+ K + + F+E D +I +G +NA+++ ++
Sbjct: 401 VTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 460
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 393
G P+ T+ I D NG ++ A++ +
Sbjct: 461 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 494
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 143/355 (40%), Gaps = 11/355 (3%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
AL L ME + V +D + K + +D A N F ++ N +TY SL++
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C C A LL M E + + + FN+L+ + K G + + +M SI P
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 363
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
D +TYN + + + A+++ E M +D D T++ L + ++ E
Sbjct: 364 DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD--CFPDVVTYNTLIKGFCKSKRVEDGTE 421
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
+E+ +R D Y LI G+ ++++ + ++Y ++ L
Sbjct: 422 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 481
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
N L A + F + DI + MI K G++++ +L +G PN
Sbjct: 482 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 541
Query: 371 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKD 425
T+ ++ A L+K + G +P+S T T +R ++ D
Sbjct: 542 TYNTMISGLCSKRLLQEAYALLKKMKEDGP------LPNSGTYNTLIRAHLRDGD 590
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/367 (20%), Positives = 147/367 (40%), Gaps = 22/367 (5%)
Query: 29 LFKKGSSDVSVRQQLNQFLKSK---KRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRG 85
L K+G +D+++ LN+ +K V + D+L K R AL L + ME +G
Sbjct: 235 LCKRGDTDLAL-NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD---DALNLFKEMETKG 290
Query: 86 MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAE 143
+ V + + + A D+ E + N +T+ +L++ + KE +AE
Sbjct: 291 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 350
Query: 144 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 203
L + M + ++ +NSL+ + +K + + M + PD TYN ++
Sbjct: 351 KLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 410
Query: 204 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 263
+ + EM G V D T++ L G + A++ K++ + D
Sbjct: 411 CKSKRVEDGTELFREMSHRGLVG-DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 469
Query: 264 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 323
+ Y L+ G L + ++ ++ + Y MI+ + A K
Sbjct: 470 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK------AGKVDD 523
Query: 324 EWESGCATY------DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 377
W+ C+ ++ N MI + L+ A L ++ + G PN+ T+
Sbjct: 524 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIR 583
Query: 378 YYLRNGD 384
+LR+GD
Sbjct: 584 AHLRDGD 590
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 127/312 (40%), Gaps = 8/312 (2%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY L+NC+C+ A ALL KM +L S + +SL+ Y A++ +M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
PD+ T+ + L N S A +++ M + G + T+ + + + G
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG-CQPNLVTYGVVVNGLCKRGD 240
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
+ A L ++E D+ + +I + ++ + +++ + ++Y +
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 300
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+I L + A + + ++ N +I A+ KEG+ AE+L + +R
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 424
DP+ T+ + + + + A E + P T T ++ F + K
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSK------DCFPDVVTYNTLIKGFCKSK 414
Query: 425 DV-DGAEGFLEI 435
V DG E F E+
Sbjct: 415 RVEDGTELFREM 426
Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 124/287 (43%), Gaps = 4/287 (1%)
Query: 77 LSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYC 134
LS+ +EK+ V+ A+ +D K AE + D+ + S + TY SL+N +C
Sbjct: 318 LSDMIEKKINPNLVTFNAL-IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC 376
Query: 135 KELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSY 194
+KA+ + E M + + +N+L+ + K+ E + +EM ++ D+
Sbjct: 377 MHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 436
Query: 195 TYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE 254
TY ++ L D A++V ++M DG V D T+S L G EKA
Sbjct: 437 TYTTLIQGLFHDGDCDNAQKVFKQMVSDG-VPPDIMTYSILLDGLCNNGKLEKALEVFDY 495
Query: 255 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 314
++ D+ Y +I + G + + + ++ SL L ++Y MI L + +
Sbjct: 496 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL 555
Query: 315 LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
L A K+ + + N +I A+ ++G + EL R
Sbjct: 556 LQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMR 602
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/334 (20%), Positives = 137/334 (41%), Gaps = 16/334 (4%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLM-TLYAKTGHPEKIPAIIQ 182
+T SLLN YC A AL+++M E+ ++ F +L+ L+ E + A++
Sbjct: 156 VTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV-ALVD 214
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
M P+ TY V + L D A ++ +M+ ++ AD F+ + +
Sbjct: 215 RMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEA-AKIEADVVIFNTIIDSLCKY 273
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY 302
+ A KE+E + ++ Y LI+ G S+ ++ + N +++
Sbjct: 274 RHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTF 333
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
+I V AEK + + DI N ++ + RL+ A+++ E
Sbjct: 334 NALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVS 393
Query: 363 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ 422
+ P+ T+ + ++ ++ + + + RG V + T T ++
Sbjct: 394 KDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM--SHRG----LVGDTVTYTTLIQGLFH 447
Query: 423 EKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYA 456
+ D D A+ ++ K+ V D GV P I TY+
Sbjct: 448 DGDCDNAQ---KVFKQMVSD-GV---PPDIMTYS 474
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 66/346 (19%), Positives = 127/346 (36%), Gaps = 54/346 (15%)
Query: 157 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
S + FN L++ AK + + ++ ++M+ I+ YTYN+ + + IS A ++
Sbjct: 84 SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALL 143
Query: 217 EEMKRDGRVAADWTTFSNLASIYVEA------------------------------GLF- 245
+M + G T S+L + Y GLF
Sbjct: 144 GKMMKLG-YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 246 -EKAERALKELE---NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
KA A+ ++ R +L Y ++ + G+ + + A +
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
+ +I L + + A FKE E+ ++ + +I GR +A +L
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 362 RRGADPNAKTWEIFSDYYLRNGDM----KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 417
+ +PN T+ D +++ G KL D ++++ID P T + +
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID----------PDIFTYNSLV 372
Query: 418 RHFEQEKDVDGAEGFLEIL--KKAVDDLGVEVFEPLIRTYAAAGRT 461
F +D A+ E + K D V + LI+ + + R
Sbjct: 373 NGFCMHDRLDKAKQMFEFMVSKDCFPD--VVTYNTLIKGFCKSKRV 416
Score = 38.9 bits (89), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
AL++ + M+K + + ++ + K +D + F + L N +TY ++++
Sbjct: 489 ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 548
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C + + ++A ALL+KMKE +S +N+L+ + + G +I+EM++ +
Sbjct: 549 GLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVG 608
Query: 192 DSYT 195
D+ T
Sbjct: 609 DAST 612
>sp|Q8S8P6|PP180_ARATH Pentatricopeptide repeat-containing protein At2g32630
OS=Arabidopsis thaliana GN=At2g32630 PE=3 SV=1
Length = 624
Score = 82.0 bits (201), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 110/251 (43%), Gaps = 1/251 (0%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY L+ K AE L ++M+E + + SL++ + G+ ++ +
Sbjct: 293 NKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLF 352
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
E+ + P SYTY + + V ++ AE ++ EM+ G V F+ L Y
Sbjct: 353 DELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKG-VNITQVVFNTLIDGYCR 411
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G+ ++A +E + D+ + + + + E + + + +S
Sbjct: 412 KGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVS 471
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y N+I V ++ A++ F E S + NVMI AY K+G+++ A +L+
Sbjct: 472 YTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANME 531
Query: 362 RRGADPNAKTW 372
G DP++ T+
Sbjct: 532 ANGMDPDSYTY 542
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 1/213 (0%)
Query: 169 AKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAAD 228
+ G EK +I+E I P++YTYN + A D SG E V++ MK+DG V +
Sbjct: 235 CRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDG-VVYN 293
Query: 229 WTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWR 288
T++ L + V+ G AE+ E+ R D+ Y LI+ + GN+ + ++
Sbjct: 294 KVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFD 353
Query: 289 SLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEG 348
L + ++ +Y +I + + ++ AE E +S V N +I Y ++G
Sbjct: 354 ELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKG 413
Query: 349 RLENAEELKERARRRGADPNAKTWEIFSDYYLR 381
++ A + + ++G + T + + R
Sbjct: 414 MVDEASMIYDVMEQKGFQADVFTCNTIASCFNR 446
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 135/309 (43%), Gaps = 19/309 (6%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVA---KVQGIDAAENYFVDLPE--TSKNHLTYGS 128
A KL + M +RG+ SD ++ L++ + + A F +L E S + TYG+
Sbjct: 313 AEKLFDEMRERGIE---SDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGA 369
Query: 129 LLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS 188
L++ CK AE L+ +M+ + + + FN+L+ Y + G ++ I M+
Sbjct: 370 LIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKG 429
Query: 189 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 248
D +T N + A++ + M +G V +++NL +Y + G E+A
Sbjct: 430 FQADVFTCNTIASCFNRLKRYDEAKQWLFRM-MEGGVKLSTVSYTNLIDVYCKEGNVEEA 488
Query: 249 ERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQV 308
+R E+ ++ + Y +I Y + G + E ++ ++ + + +Y ++I
Sbjct: 489 KRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHG 548
Query: 309 LVNLKDLPGAEKCFKEW-----ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
++ A + F E + TY VMI +K G+ + A L + +R+
Sbjct: 549 ECIADNVDEAMRLFSEMGLKGLDQNSVTY-----TVMISGLSKAGKSDEAFGLYDEMKRK 603
Query: 364 GADPNAKTW 372
G + K +
Sbjct: 604 GYTIDNKVY 612
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 153/364 (42%), Gaps = 48/364 (13%)
Query: 67 DRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVA--KVQGIDAAENYFVDLPETSKNHL 124
D ++ L++ + M K+G+ ++ +++ + LVA K + ID F + ++
Sbjct: 166 DNGMFEEGLRVFDYMVKKGL--SIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKIT 223
Query: 125 TYG--SLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQ 182
Y ++ C+ EK++ L+++ + + +N+++ Y K + +++
Sbjct: 224 VYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLK 283
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
MK ++ + TY + M +S AE++ +EM+ G + +D +++L S
Sbjct: 284 VMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERG-IESDVHVYTSLISWNCRK 342
Query: 243 G-------LFEK----------------------------AERALKELENRNAHRDLSAY 267
G LF++ AE + E++++ + +
Sbjct: 343 GNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVF 402
Query: 268 QFLITLYGQTGNLSEVYRIWRSL-RLAFPNTANISYLNMIQVLVN-LKDLPGAEK-CFKE 324
LI Y + G + E I+ + + F A++ N I N LK A++ F+
Sbjct: 403 NTLIDGYCRKGMVDEASMIYDVMEQKGFQ--ADVFTCNTIASCFNRLKRYDEAKQWLFRM 460
Query: 325 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 384
E G + TN +I Y KEG +E A+ L +G PNA T+ + Y + G
Sbjct: 461 MEGGVKLSTVSYTN-LIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGK 519
Query: 385 MKLA 388
+K A
Sbjct: 520 IKEA 523
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 90/193 (46%), Gaps = 3/193 (1%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELM 138
ME++G V +++ D A+ + + E + ++Y +L++ YCKE
Sbjct: 425 MEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGN 484
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
E+A+ L +M + +++ +N ++ Y K G ++ + M+A+ + PDSYTY
Sbjct: 485 VEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTS 544
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
+ +++ A R+ EM G + + T++ + S +AG ++A E++ +
Sbjct: 545 LIHGECIADNVDEAMRLFSEMGLKG-LDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRK 603
Query: 259 NAHRDLSAYQFLI 271
D Y LI
Sbjct: 604 GYTIDNKVYTALI 616
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 82.0 bits (201), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 130/277 (46%), Gaps = 1/277 (0%)
Query: 114 VDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGH 173
++L S + ++ L++C+C+ A ++L KM +L S + F SL+ +
Sbjct: 97 MELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNR 156
Query: 174 PEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFS 233
+++ M S P+ YN + L +++ A ++ EM++ G + AD T++
Sbjct: 157 IGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKG-LGADVVTYN 215
Query: 234 NLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 293
L + +G + A R L+++ R+ + D+ + LI ++ + GNL E +++ + +
Sbjct: 216 TLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS 275
Query: 294 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
+ N++Y ++I L L A+K F S ++ N +I + K ++
Sbjct: 276 SVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEG 335
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 390
+L +R G + + T+ Y + G +++A+D
Sbjct: 336 MKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALD 372
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 112/262 (42%), Gaps = 5/262 (1%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY +LL C A +L M + ++ + F +L+ ++ K G+ ++ + +E
Sbjct: 212 VTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKE 271
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M SS+ P++ TYN + L + A++ + M G + T++ L S + +
Sbjct: 272 MIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKG-CFPNVVTYNTLISGFCKFR 330
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI--WRSLRLAFPNTANIS 301
+ ++ + + + + D+ Y LI Y Q G L I W R P+ I+
Sbjct: 331 MVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDI--IT 388
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
+ ++ L ++ A F + I N+MI K ++E A EL R
Sbjct: 389 HCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLP 448
Query: 362 RRGADPNAKTWEIFSDYYLRNG 383
G P+A+T+ I +NG
Sbjct: 449 VEGVKPDARTYTIMILGLCKNG 470
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/286 (20%), Positives = 106/286 (37%), Gaps = 38/286 (13%)
Query: 140 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 199
E A AL +M S + F L+T A E + Q+M+ I D Y++ +
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112
Query: 200 MRALAAVNDISGAERVIEEMKRDG-------------------RVAADWT---------- 230
+ + +S A V+ +M + G R+ ++
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172
Query: 231 -----TFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 285
++ L + G A L E+E + D+ Y L+T +G S+ R
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 286 IWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 345
+ R + N +++ +I V V +L A++ +KE + N +I
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Query: 346 KEGRLENAEELKERARRRGADPNAKTWEI----FSDYYLRNGDMKL 387
GRL +A++ + +G PN T+ F + + + MKL
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKL 338
Score = 39.3 bits (90), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 44/99 (44%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TY +L++ +CK M ++ L ++M +N+L+ Y + G I
Sbjct: 315 NVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIF 374
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
M + + PD T+ + + L +I A ++M+
Sbjct: 375 CWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMR 413
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 128/301 (42%), Gaps = 5/301 (1%)
Query: 106 IDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNS 163
+DAA F ++PE N T+G L+ YCK +T+K LL M+ + + + +N+
Sbjct: 163 VDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNT 222
Query: 164 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRD- 222
+++ + + G + ++++M+ ++PD T+N + AL + A R+ +M+ D
Sbjct: 223 IVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDE 282
Query: 223 --GRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
G + T++ + + + GL E A+ + + + L +Y + + G
Sbjct: 283 YLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKF 342
Query: 281 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 340
E + + + + SY ++ L L L A+ + D +
Sbjct: 343 IEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCL 402
Query: 341 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 400
+ Y G+++ A+ L + R PNA T I + G + A + L K + G
Sbjct: 403 LHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGY 462
Query: 401 G 401
G
Sbjct: 463 G 463
Score = 62.8 bits (151), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/349 (19%), Positives = 142/349 (40%), Gaps = 27/349 (7%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE---TSKNHLTYGSLLNCYCKEL 137
M +G+ ++ I +D + K+ G+ + V L + + +TYG LL+ YC
Sbjct: 352 MTDKGIGPSIYSYNILMDGLCKL-GMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVG 410
Query: 138 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 197
+ A++LL++M N ++ N L+ K G + ++++M D+ T N
Sbjct: 411 KVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCN 470
Query: 198 VWMRALAAVNDISGAERVIEEMKRDGRVA----------------------ADWTTFSNL 235
+ + L ++ A +++ M+ G A D T+S L
Sbjct: 471 IIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTL 530
Query: 236 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 295
+ +AG F +A+ E+ D AY I + + G +S +R+ + +
Sbjct: 531 LNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGC 590
Query: 296 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEE 355
+ + +Y ++I L + E + + +I N I + ++E+A
Sbjct: 591 HKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATN 650
Query: 356 LKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID-TGRGDG 403
L + ++ PN +++ + + + D +A + E A+ G+ +G
Sbjct: 651 LLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEG 699
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 114/277 (41%), Gaps = 7/277 (2%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
T+ L+ C + A L ++M E + F L+ Y K G +K ++ M
Sbjct: 149 TFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAM 208
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
++ ++P+ YN + + +E+++E+M+ +G V D TF++ S + G
Sbjct: 209 ESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLV-PDIVTFNSRISALCKEGK 267
Query: 245 FEKAERALKELENRNAHRDLS-----AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
A R ++E + + L Y ++ + + G L + ++ S+R +
Sbjct: 268 VLDASRIFSDME-LDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASL 326
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
SY +Q LV AE K+ I N+++ K G L +A+ +
Sbjct: 327 QSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGL 386
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 396
+R G P+A T+ Y G + A L++ +
Sbjct: 387 MKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMM 423
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/305 (20%), Positives = 126/305 (41%), Gaps = 11/305 (3%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
+N L+ K E + + ++M I P +YT+N+ +RAL + + A + +EM
Sbjct: 115 YNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMP 174
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
G ++ TF L Y +AGL +K L +E+ + Y +++ + + G
Sbjct: 175 EKGCKPNEF-TFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRN 233
Query: 281 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE----SGCATYDIRV 336
+ ++ +R +++ + I L + A + F + E G +
Sbjct: 234 DDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSIT 293
Query: 337 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 396
N+M+ + K G LE+A+ L E R + +++ I+ +R+G A L++
Sbjct: 294 YNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMT 353
Query: 397 DTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYA 456
D G G PS + M + + A+ + ++K+ + L+ Y
Sbjct: 354 DKGIG------PSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYC 407
Query: 457 AAGRT 461
+ G+
Sbjct: 408 SVGKV 412
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/368 (18%), Positives = 138/368 (37%), Gaps = 19/368 (5%)
Query: 75 LKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF----VDLPETSKNHLTYGSLL 130
L LS +++K ++ +S +I AK ID A F PE + Y LL
Sbjct: 64 LILSSSIQKTKLSSLLSVVSI----FAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLL 119
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
KE E L + M + + FN L+ + + + EM
Sbjct: 120 ESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCK 179
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
P+ +T+ + +R ++ M+ G V + ++ + S + G + +E+
Sbjct: 180 PNEFTFGILVRGYCKAGLTDKGLELLNAMESFG-VLPNKVIYNTIVSSFCREGRNDDSEK 238
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR----LAFPNTANISYLNMI 306
++++ D+ + I+ + G + + RI+ + L P +I+Y M+
Sbjct: 239 MVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLML 298
Query: 307 QVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD 366
+ + L A+ F+ ++ N+ + + G+ AE + ++ +G
Sbjct: 299 KGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIG 358
Query: 367 PNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDV 426
P+ ++ I D G KL + K I G P + T + + V
Sbjct: 359 PSIYSYNILMD-----GLCKLGMLSDAKTI-VGLMKRNGVCPDAVTYGCLLHGYCSVGKV 412
Query: 427 DGAEGFLE 434
D A+ L+
Sbjct: 413 DAAKSLLQ 420
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 158/393 (40%), Gaps = 14/393 (3%)
Query: 29 LFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNK 88
L K S V++ Q+ Q V V + L K D L AL L + MEK +
Sbjct: 200 LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL---ALSLLKKMEKGKIEA 256
Query: 89 TVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLNCYCKELMTEKAEALL 146
V +D + K + +D A N F ++ + TY SL++C C A LL
Sbjct: 257 DVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 316
Query: 147 EKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV 206
M E + + + F++L+ + K G + + EM SI PD +TY+ +
Sbjct: 317 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 376
Query: 207 NDISGAERVIEEM-KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 265
+ + A+ + E M +D + T+S L + +A E+ +E+ R +
Sbjct: 377 DRLDEAKHMFELMISKD--CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 434
Query: 266 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 325
Y LI + Q + +++ + + ++Y ++ L L A F+
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 494
Query: 326 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 385
+ DI N+MI K G++E+ EL +G PN + + R G
Sbjct: 495 QRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSK 554
Query: 386 KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 418
+ A L+K + G +P+S T T +R
Sbjct: 555 EEADSLLKKMKEDGP------LPNSGTYNTLIR 581
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/387 (21%), Positives = 157/387 (40%), Gaps = 22/387 (5%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
+ L E M+ G++ + +I ++ + + A + + + +T SLLN
Sbjct: 102 VISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLN 161
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLM-TLYAKTGHPEKIPAIIQEMKASSIM 190
YC A AL+++M E+ + F +L+ L+ E + A++ +M
Sbjct: 162 GYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV-ALVDQMVQRGCQ 220
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
PD TY + L DI A ++++M++ G++ AD ++ + + + A
Sbjct: 221 PDLVTYGTVVNGLCKRGDIDLALSLLKKMEK-GKIEADVVIYNTIIDGLCKYKHMDDALN 279
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQV 308
E++N+ D+ Y LI+ G S+ R+ + R PN S L I
Sbjct: 280 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL--IDA 337
Query: 309 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 368
V L AEK + E DI + +I + RL+ A+ + E + PN
Sbjct: 338 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 397
Query: 369 AKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDG 428
T+ + + ++ ++ + G V ++ T T + F Q +D D
Sbjct: 398 VVTYSTLIKGFCKAKRVEEGMELFREMSQRG------LVGNTVTYTTLIHGFFQARDCDN 451
Query: 429 AEGFLEILKKAVDDLGVEVFEPLIRTY 455
A +++ K + +GV P I TY
Sbjct: 452 A----QMVFKQMVSVGV---HPNILTY 471
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/344 (19%), Positives = 129/344 (37%), Gaps = 50/344 (14%)
Query: 157 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
S + FN L++ AK E + ++ ++M+ I D YTY++++ + +S A V+
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 217 EEMKRDGRVAADWTTFSNLASIYVEA------------------------------GLF- 245
+M + G D T S+L + Y + GLF
Sbjct: 142 AKMMKLG-YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 246 -EKAERA---LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
KA A + ++ R DL Y ++ + G++ + + + +
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I L K + A F E ++ D+ + +I GR +A L
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 362 RRGADPNAKTWEIFSDYYLRNGDM----KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 417
R +PN T+ D +++ G + KL + ++++ID P T + +
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID----------PDIFTYSSLI 370
Query: 418 RHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 461
F +D A+ E++ V + LI+ + A R
Sbjct: 371 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRV 414
Score = 41.6 bits (96), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
TY ++ CK E L + + + + +N++++ + + G E+ +++++M
Sbjct: 505 TYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKM 564
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTT 231
K +P+S TYN +RA D + +I+EM+ G A D +T
Sbjct: 565 KEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCG-FAGDAST 610
Score = 40.8 bits (94), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP--ETSKNHLTYGSLLN 131
A+ + E +++ M + I ++ + K ++ F +L S N + Y ++++
Sbjct: 487 AMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMIS 546
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C++ E+A++LL+KMKE +S +N+L+ + G E +I+EM++
Sbjct: 547 GFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAG 606
Query: 192 DSYT 195
D+ T
Sbjct: 607 DAST 610
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 119/274 (43%), Gaps = 3/274 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
+ +TYG +LN CK + A L KM+E N+ S + ++ ++ K G + ++
Sbjct: 209 DEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLF 268
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGR-VAADWTTFSNLASIYV 240
EM+ I D TY+ + L +++ EM GR + D TFS L ++V
Sbjct: 269 NEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI--GRNIIPDVVTFSALIDVFV 326
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
+ G +A+ E+ R D Y LI + + L E +++ + +
Sbjct: 327 KEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIV 386
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
+Y +I K + + F+E S + N ++ + + G+L A+EL +
Sbjct: 387 TYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEM 446
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
RG P+ T+ I D NG++ A++ EK
Sbjct: 447 VSRGVPPSVVTYGILLDGLCDNGELNKALEIFEK 480
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 148/358 (41%), Gaps = 38/358 (10%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
AL L ME+R + +V +I +D + K D A + F +++ + +TY SL+
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C + + +L +M N+ + F++L+ ++ K G + + EM I P
Sbjct: 289 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 348
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D+ TYN + N + A ++ + M G D T+S L + Y +A + R
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMFDLMVSKG-CEPDIVTYSILINSYCKAKRVDDGMRL 407
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
+E+ ++ + Y L+ + Q+G L+ +++ + + ++Y ++ L +
Sbjct: 408 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 467
Query: 312 LKDLPGAEKCFKE-----------------------------WESGCATYD------IRV 336
+L A + F++ W C+ D +
Sbjct: 468 NGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVT 527
Query: 337 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
NVMIG K+G L A+ L + + G P+ T+ I +L + +V+ +E+
Sbjct: 528 YNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEE 585
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/381 (20%), Positives = 151/381 (39%), Gaps = 48/381 (12%)
Query: 117 PETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK 176
P+T +T+ +L+N +C E +A AL+++M E+ + ++L+ G +
Sbjct: 138 PDT----ITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSE 193
Query: 177 IPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA--------ER-----------VIE 217
+I M PD TY + L + + A ER VI+
Sbjct: 194 ALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVID 253
Query: 218 EMKRDGR---------------VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 262
+ +DG + AD T+S+L G ++ + L+E+ RN
Sbjct: 254 SLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP 313
Query: 263 DLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEK 320
D+ + LI ++ + G L E ++ + R P+T I+Y ++I L A +
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT--ITYNSLIDGFCKENCLHEANQ 371
Query: 321 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 380
F S DI +++I +Y K R+++ L +G PN T+ +
Sbjct: 372 MFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFC 431
Query: 381 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 440
++G + A + ++ + G PS T + +++ A E ++K+
Sbjct: 432 QSGKLNAAKELFQEMVSRG------VPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 485
Query: 441 DDLGVEVFEPLIRTYAAAGRT 461
LG+ ++ +I A +
Sbjct: 486 MTLGIGIYNIIIHGMCNASKV 506
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 128/320 (40%), Gaps = 14/320 (4%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
T ++NCYC++ A ++L + +L ++ F++L+ + G + A++ M
Sbjct: 107 TMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRM 166
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
PD T + + L +S A +I+ M G D T+ + + ++G
Sbjct: 167 VEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYG-FQPDEVTYGPVLNRLCKSGN 225
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
A +++E RN + Y +I + G+ + ++ + + ++Y +
Sbjct: 226 SALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSS 285
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+I L N K +E D+ + +I + KEG+L A+EL RG
Sbjct: 286 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG 345
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA---IDTGRGDGGKWVPSSETIRTFMRHFE 421
P+ T+ D + + +CL +A D G + P T + +
Sbjct: 346 IAPDTITYNSLIDGFCKE-------NCLHEANQMFDLMVSKGCE--PDIVTYSILINSYC 396
Query: 422 QEKDV-DGAEGFLEILKKAV 440
+ K V DG F EI K +
Sbjct: 397 KAKRVDDGMRLFREISSKGL 416
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 109/259 (42%), Gaps = 3/259 (1%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
+ + +TY SL++ +CKE +A + + M + ++ L+ Y K +
Sbjct: 347 APDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMR 406
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
+ +E+ + ++P++ TYN + ++ A+ + +EM G V T+ L
Sbjct: 407 LFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG-VPPSVVTYGILLDGL 465
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
+ G KA ++++ + Y +I + + + ++ SL
Sbjct: 466 CDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDV 525
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
++Y MI L L A+ F++ E GC T D N++I A+ L ++ EL E
Sbjct: 526 VTYNVMIGGLCKKGSLSEADMLFRKMKEDGC-TPDDFTYNILIRAHLGGSGLISSVELIE 584
Query: 359 RARRRGADPNAKTWEIFSD 377
+ G ++ T ++ D
Sbjct: 585 EMKVCGFSADSSTIKMVID 603
Score = 33.9 bits (76), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 59/344 (17%), Positives = 116/344 (33%), Gaps = 42/344 (12%)
Query: 157 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
+ + FN L + A+T + + + M+ + I D YT + + + A V+
Sbjct: 69 TPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVL 128
Query: 217 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI----- 271
+ G D TFS L + + G +A + + DL LI
Sbjct: 129 GRAWKLGY-EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCL 187
Query: 272 -----------------------TLYG-------QTGNLSEVYRIWRSLRLAFPNTANIS 301
YG ++GN + ++R + + +
Sbjct: 188 KGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQ 247
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I L A F E E D+ + +IG +G+ ++ ++
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
R P+ T+ D +++ G + A + + I G P + T + + F
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG------IAPDTITYNSLIDGFC 361
Query: 422 QEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVM 465
+E + A +++ + + + LI +Y A R M
Sbjct: 362 KENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGM 405
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/395 (20%), Positives = 171/395 (43%), Gaps = 19/395 (4%)
Query: 65 LRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAK-VQGIDAAENYFVDLPETSK-- 121
L D L A ++ E M G+ +V ++L ++K A F + PE
Sbjct: 185 LVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCW 244
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +Y +++ C+ ++A LL M+ + +++++ Y + G +K+ +I
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+ MK + P+SY Y + L + ++ AE EM R G + D ++ L + +
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG-ILPDTVVYTTLIDGFCK 363
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G A + E+ +R+ D+ Y +I+ + Q G++ E +++ + +++
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 423
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
+ +I + A + ++GC+ ++ +I KEG L++A EL
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSP-NVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 420
+ G PN T+ + ++G+++ AV + G + + T T M +
Sbjct: 483 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV------GEFEAAGLNADTVTYTTLMDAY 536
Query: 421 EQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 455
+ ++D A+ EILK+ + + +P I T+
Sbjct: 537 CKSGEMDKAQ---EILKEMLG----KGLQPTIVTF 564
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 129/279 (46%), Gaps = 1/279 (0%)
Query: 119 TSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP 178
S N +TY +L++ CKE + A LL +M ++ L + +NS++ K+G+ E+
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 179 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 238
++ E +A+ + D+ TY M A ++ A+ +++EM G + TF+ L +
Sbjct: 512 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG-LQPTIVTFNVLMNG 570
Query: 239 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 298
+ G+ E E+ L + + + + + L+ Y NL I++ +
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 630
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+Y N+++ +++ A F+E + + + +V+I + K + A E+ +
Sbjct: 631 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 690
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 397
+ RR G + + ++ FSD + VD +++ I+
Sbjct: 691 QMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 729
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/336 (19%), Positives = 134/336 (39%), Gaps = 11/336 (3%)
Query: 76 KLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVD------LPETSKNHLTYGSL 129
KL E M+++G+ + L+ ++ + AE F + LP+T + Y +L
Sbjct: 302 KLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDT----VVYTTL 357
Query: 130 LNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
++ +CK A +M ++ + + ++++ + + G + + EM +
Sbjct: 358 IDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 417
Query: 190 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 249
PDS T+ + + A RV M + G + + T++ L + G + A
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG-CSPNVVTYTTLIDGLCKEGDLDSAN 476
Query: 250 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 309
L E+ ++ Y ++ ++GN+ E ++ A N ++Y ++
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
++ A++ KE I NV++ + G LE+ E+L +G PNA
Sbjct: 537 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 596
Query: 370 KTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGK 405
T+ Y ++K A + G G GK
Sbjct: 597 TTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 135/341 (39%), Gaps = 7/341 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N T LLNC+C+ A + L KM +L S + F SL+ + + +
Sbjct: 115 NLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMF 174
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
+M P+ YN + L + A ++ M++DG + D T+++L S
Sbjct: 175 DQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDG-IGPDVVTYNSLISGLCS 233
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
+G + A R + + R + D+ + LI + G +SE + + + ++
Sbjct: 234 SGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVT 293
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I L L AE+ F S D+ +++I Y K ++E+ +L
Sbjct: 294 YSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMS 353
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
+RG N T+ I Y R G + +A + + + G P+ T +
Sbjct: 354 QRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVH------PNIITYNVLLHGLC 407
Query: 422 QEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTS 462
++ A L ++K D + + +IR AG +
Sbjct: 408 DNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVA 448
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/178 (19%), Positives = 80/178 (44%), Gaps = 3/178 (1%)
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELM 138
M +G V +I ++ K + ++ F ++ + +N +TY L+ YC+
Sbjct: 317 MVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGK 376
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
AE + +M + + + +N L+ G EK I+ +M+ + + D TYN+
Sbjct: 377 LNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNI 436
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 256
+R + +++ A + + G + WT + + +Y + GL +A+ ++++
Sbjct: 437 IIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLY-KKGLRREADALFRKMK 493
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 61/152 (40%), Gaps = 2/152 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
+KL M +RG+ + I + + ++ AE F + N +TY LL+
Sbjct: 345 GMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLH 404
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C EKA +L M++ + + +N ++ K G I + +MP
Sbjct: 405 GLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMP 464
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDG 223
D +TY M L A+ + +MK DG
Sbjct: 465 DIWTYTTMMLGLYKKGLRREADALFRKMKEDG 496
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 119/311 (38%), Gaps = 36/311 (11%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY S++ CK +KA +L M + + M +NS++ Y +G P++ +++
Sbjct: 232 VTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKK 291
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M++ + PD TY++ M L A ++ + M + G + + TT+ L Y G
Sbjct: 292 MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRG-LKPEITTYGTLLQGYATKG 350
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF--PNT---- 297
+ L + H D + LI Y + G + + ++ +R PN
Sbjct: 351 ALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYG 410
Query: 298 -----------------------------ANISYLNMIQVLVNLKDLPGAEKCFKEWESG 328
NI Y ++I L AE+ E
Sbjct: 411 AVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR 470
Query: 329 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 388
+ N +I ++ KEGR+ +E+L E R G PN T+ + Y G M A
Sbjct: 471 GICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEA 530
Query: 389 VDCLEKAIDTG 399
+ L + G
Sbjct: 531 MKLLSGMVSVG 541
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 127/286 (44%), Gaps = 6/286 (2%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMP----FNSLMTLYAKTGHPEKI 177
N +Y LL C E +++A LL M + + G S P + +++ + K G +K
Sbjct: 157 NVFSYNILLKGLCDENRSQEALELLHMMAD-DRGGGSPPDVVSYTTVINGFFKEGDSDKA 215
Query: 178 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 237
+ EM I+PD TYN + AL + A V+ M ++G V D T++++
Sbjct: 216 YSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG-VMPDCMTYNSILH 274
Query: 238 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 297
Y +G ++A LK++ + D+ Y L+ + G E +I+ S+
Sbjct: 275 GYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKP 334
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
+Y ++Q L D V +++I AYAK+G+++ A +
Sbjct: 335 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVF 394
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDG 403
+ R++G +PNA T+ ++G ++ A+ E+ ID G G
Sbjct: 395 SKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPG 440
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 132/323 (40%), Gaps = 8/323 (2%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL---PETSKNHLTYGSLL 130
A K+ ++M KRG+ ++ L A +G + +DL +H + L+
Sbjct: 320 ARKIFDSMTKRGLKPEITTYGTLLQGYA-TKGALVEMHGLLDLMVRNGIHPDHYVFSILI 378
Query: 131 NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM 190
Y K+ ++A + KM++ L +++ + +++ + K+G E ++M +
Sbjct: 379 CAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLS 438
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
P + YN + L N AE +I EM G + + F+++ + + G ++E+
Sbjct: 439 PGNIVYNSLIHGLCTCNKWERAEELILEMLDRG-ICLNTIFFNSIIDSHCKEGRVIESEK 497
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
+ + ++ Y LI Y G + E ++ + ++Y +I
Sbjct: 498 LFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYC 557
Query: 311 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 370
+ + A FKE ES + DI N+++ + R A+EL R G
Sbjct: 558 KISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELS 617
Query: 371 TWEIFSDYYLRNGDMKLAVDCLE 393
T+ I +N KL D L+
Sbjct: 618 TYNIILHGLCKN---KLTDDALQ 637
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/312 (20%), Positives = 131/312 (41%), Gaps = 3/312 (0%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A+ + M ++G+N + ++ K ++ A YF + + S ++ Y SL++
Sbjct: 390 AMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIH 449
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C E+AE L+ +M + + +++ FNS++ + K G + + + M + P
Sbjct: 450 GLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKP 509
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ TYN + + A +++ M G + + T+S L + Y + E A
Sbjct: 510 NVITYNTLINGYCLAGKMDEAMKLLSGMVSVG-LKPNTVTYSTLINGYCKISRMEDALVL 568
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
KE+E+ D+ Y ++ QT + ++ + + +Y ++ L
Sbjct: 569 FKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCK 628
Query: 312 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 371
K A + F+ + R N+MI A K GR + A++L G PN T
Sbjct: 629 NKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWT 688
Query: 372 WEIFSDYYLRNG 383
+ + ++ + G
Sbjct: 689 YRLMAENIIGQG 700
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/361 (19%), Positives = 139/361 (38%), Gaps = 48/361 (13%)
Query: 118 ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLM-TLYAKTGHPEK 176
E + + TYG L+ C C+ + A L + + ++ F L+ L A +
Sbjct: 82 EVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 141
Query: 177 IPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM--KRDGRVAADWTTFSN 234
+ +++ M +P+ ++YN+ ++ L N A ++ M R G D +++
Sbjct: 142 MDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTT 201
Query: 235 LASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF 294
+ + + + G +KA E+ +R D+ Y +I + + +
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKA----------- 250
Query: 295 PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAE 354
+ ++ +V +P C TY N ++ Y G+ + A
Sbjct: 251 --------MEVLNTMVKNGVMP-----------DCMTY-----NSILHGYCSSGQPKEAI 286
Query: 355 ELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE--KAIDTGRGDGGKWVPSSET 412
++ R G +P+ T+ + DY +NG C+E K D+ G K P T
Sbjct: 287 GFLKKMRSDGVEPDVVTYSLLMDYLCKNG------RCMEARKIFDSMTKRGLK--PEITT 338
Query: 413 IRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKME 472
T ++ + + + G L+++ + VF LI YA G+ ML KM
Sbjct: 339 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMR 398
Query: 473 K 473
+
Sbjct: 399 Q 399
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 137/324 (42%), Gaps = 12/324 (3%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S N TY L+NC+C+ A A+L KM +L + NSL+ + +
Sbjct: 113 SHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVS 172
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
++ +M PDS+T+N + L N S A +++ M G D T+ + +
Sbjct: 173 LVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG-CQPDLVTYGIVVNGL 231
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNT 297
+ G + A LK++E + Y +I N+++ ++ + + PN
Sbjct: 232 CKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 291
Query: 298 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 357
++Y ++I+ L N A + + ++ + +I A+ KEG+L AE+L
Sbjct: 292 --VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 349
Query: 358 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 417
+ +R DP+ T+ + + + + A E I P+ T T +
Sbjct: 350 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK------DCFPNVVTYNTLI 403
Query: 418 RHFEQEKDVD-GAEGFLEILKKAV 440
+ F + K VD G E F E+ ++ +
Sbjct: 404 KGFCKAKRVDEGMELFREMSQRGL 427
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 115/286 (40%), Gaps = 36/286 (12%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TYG ++N CK + A +LL+KM++ + + +N+++ + + E
Sbjct: 222 VTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTE 281
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M I P+ TYN +R L S A R++ +M + ++ + TFS L +V+ G
Sbjct: 282 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI-ERKINPNVVTFSALIDAFVKEG 340
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTAN-- 299
+AE+ E+ R+ D+ Y LI + L E ++ + + FPN
Sbjct: 341 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 400
Query: 300 -------------------------------ISYLNMIQVLVNLKDLPGAEKCFKEWESG 328
++Y +I ++ A+ FK+ S
Sbjct: 401 TLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSD 460
Query: 329 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 374
DI ++++ G++E A + E +R +P+ T+ I
Sbjct: 461 GVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNI 506
Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 147/357 (41%), Gaps = 15/357 (4%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
AL L + ME+ + V +D + + ++ A N F ++ N +TY SL+
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C C A LL M E + + + F++L+ + K G + + EM SI P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 359
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
D +TY+ + + + A+ + E M +D + T++ L + +A ++
Sbjct: 360 DIFTYSSLINGFCMHDRLDEAKHMFELMISKD--CFPNVVTYNTLIKGFCKAKRVDEGME 417
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTANISYLNMIQV 308
+E+ R + Y LI + Q +++ + P+ ++Y ++
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDI--MTYSILLDG 475
Query: 309 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 368
L N + A F+ + DI N+MI K G++E+ +L +G PN
Sbjct: 476 LCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 535
Query: 369 AKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKD 425
T+ + R G +K D L + + + +G +P S T T +R ++ D
Sbjct: 536 VVTYTTMMSGFCRKG-LKEEADALFREM---KEEGP--LPDSGTYNTLIRAHLRDGD 586
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/259 (19%), Positives = 105/259 (40%), Gaps = 39/259 (15%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL--PETSKNHLTYGSLLN 131
A KL + M KR ++ + + ++ +D A++ F + + N +TY +L+
Sbjct: 345 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 404
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+CK ++ L +M + L +++ + +L+ + + + + ++M + ++P
Sbjct: 405 GFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLP 464
Query: 192 DSYTYNVWMRALAAVN-------------------DISGAERVIEEMKRDGRVAADW--- 229
D TY++ + L DI +IE M + G+V W
Sbjct: 465 DIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 230 ------------TTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQT 277
T++ + S + GL E+A+ +E++ D Y LI + +
Sbjct: 525 CSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRD 584
Query: 278 GN---LSEVYRIWRSLRLA 293
G+ +E+ R RS R
Sbjct: 585 GDKAASAELIREMRSCRFV 603
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/370 (21%), Positives = 154/370 (41%), Gaps = 13/370 (3%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL L ME+R + V + +D + + IDAA + F ++ + +TY SL+
Sbjct: 212 ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 271
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
CK LL+ M + + + FN L+ ++ K G ++ + +EM I P
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ TYN M N +S A +++ M R+ + + D TF++L Y + +
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNMLDLMVRN-KCSPDIVTFTSLIKGYCMVKRVDDGMKV 390
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVL 309
+ + R + Y L+ + Q+G + +++ + P+ ++Y ++ L
Sbjct: 391 FRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDV--MTYGILLDGL 448
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
+ L A + F++ + I + +I K G++E+A L +G PN
Sbjct: 449 CDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNV 508
Query: 370 KTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 429
T+ + + G + A L K + G P+ T T +R ++ D+ +
Sbjct: 509 MTYTVMISGLCKKGSLSEANILLRKMEEDGNA------PNDCTYNTLIRAHLRDGDLTAS 562
Query: 430 EGFLEILKKA 439
+E +K
Sbjct: 563 AKLIEEMKSC 572
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 137/338 (40%), Gaps = 42/338 (12%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TY S++N C+ T A LL KM+E N+ +++++ + G + ++ +E
Sbjct: 194 VTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKE 253
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ I TYN +R L + ++++M + + TF+ L ++V+ G
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR-EIVPNVITFNVLLDVFVKEG 312
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 303
++A KE+ R ++ Y L+ Y LSE AN
Sbjct: 313 KLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE---------------AN---- 353
Query: 304 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
NM+ ++V K P DI +I Y R+++ ++ +R
Sbjct: 354 NMLDLMVRNKCSP----------------DIVTFTSLIKGYCMVKRVDDGMKVFRNISKR 397
Query: 364 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQE 423
G NA T+ I + ++G +KLA + ++ + G +P T +
Sbjct: 398 GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG------VLPDVMTYGILLDGLCDN 451
Query: 424 KDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 461
++ A E L+K+ DLG+ ++ +I G+
Sbjct: 452 GKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKV 489
Score = 41.6 bits (96), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 82/196 (41%), Gaps = 38/196 (19%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTYGSLLN 131
+K+ N+ KRG+ +I + + I AE F ++ + +TYG LL+
Sbjct: 387 GMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLD 446
Query: 132 CYCKELMTEKAEALLEKMKE--LNLG-----------------------FSSMP------ 160
C EKA + E +++ ++LG F S+P
Sbjct: 447 GLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKP 506
Query: 161 ----FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
+ +++ K G + ++++M+ P+ TYN +RA D++ + ++I
Sbjct: 507 NVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLI 566
Query: 217 EEMKRDGRVAADWTTF 232
EEMK G +AD ++
Sbjct: 567 EEMKSCG-FSADASSI 581
Score = 41.2 bits (95), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 2/149 (1%)
Query: 59 GDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP- 117
G L L D AL++ E+++K M+ + ++ + K ++ A N F LP
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 501
Query: 118 -ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK 176
N +TY +++ CK+ +A LL KM+E + +N+L+ + + G
Sbjct: 502 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTA 561
Query: 177 IPAIIQEMKASSIMPDSYTYNVWMRALAA 205
+I+EMK+ D+ + + + L +
Sbjct: 562 SAKLIEEMKSCGFSADASSIKMVIDMLLS 590
>sp|Q9FVX2|PP129_ARATH Pentatricopeptide repeat-containing protein At1g77360,
mitochondrial OS=Arabidopsis thaliana GN=At1g77360 PE=2
SV=2
Length = 517
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 120/292 (41%), Gaps = 9/292 (3%)
Query: 161 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
F +M YA+ ++ M+ + P+ +N + AL ++ A+ V E M+
Sbjct: 171 FCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMR 230
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
R D T+S L + + KA +E+ + H D+ Y ++ + + G +
Sbjct: 231 --DRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRV 288
Query: 281 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 340
E I RS+ + Y ++ L A F E E D+ V N +
Sbjct: 289 DEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSL 348
Query: 341 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 400
IGA+ K R++N + + + +G PN+K+ I + + G+ A D K I
Sbjct: 349 IGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCE 408
Query: 401 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLI 452
P ++T ++ F ++K+++ A+ + ++K + F LI
Sbjct: 409 -------PDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLI 453
Score = 33.1 bits (74), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAK 170
T+ L+N C+E T+KA LLE+M E+ + S + F L L K
Sbjct: 448 TFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIK 493
Score = 32.7 bits (73), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 41/207 (19%), Positives = 79/207 (38%), Gaps = 37/207 (17%)
Query: 85 GMNKTVSDQAIHLDLVAKVQGIDAAENYFVDL-PETSK-NHLTYGSLLNCYCKELMTEKA 142
G + + +I +D++ K +D A + P K Y L++ Y E E+A
Sbjct: 267 GCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEA 326
Query: 143 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP----------- 191
+M+ + FNSL+ + K + + +++EMK+ + P
Sbjct: 327 VDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRH 386
Query: 192 -----------------------DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAAD 228
D+ TY + ++ ++ A++V + M++ G V
Sbjct: 387 LIERGEKDEAFDVFRKMIKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKG-VFPS 445
Query: 229 WTTFSNLASIYVEAGLFEKAERALKEL 255
TFS L + E +KA L+E+
Sbjct: 446 MHTFSVLINGLCEERTTQKACVLLEEM 472
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 140/332 (42%), Gaps = 15/332 (4%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+T+ +L+N C E +A AL+ KM L + + +++ K G + ++ +
Sbjct: 227 ITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSK 286
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ + I PD Y+ + L S A+ + EM G +A + T++ + + G
Sbjct: 287 MEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG-IAPNVFTYNCMIDGFCSFG 345
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANIS 301
+ A+R L+++ R + D+ + LI+ + G L E ++ + R FP+T ++
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT--VT 403
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +MI A+ F A+ D+ N +I Y + R++ +L
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 459
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
RRG N T+ + ++ A D ++ I G P + T + F
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG------VCPDTITCNILLYGFC 513
Query: 422 QEKDVDGAEGFLEILKKAVDDLGVEVFEPLIR 453
+ + ++ A E+++ + DL + +I
Sbjct: 514 ENEKLEEALELFEVIQMSKIDLDTVAYNIIIH 545
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/358 (20%), Positives = 142/358 (39%), Gaps = 17/358 (4%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
AL L ME+ + V + +D + K A+ F ++ E + N TY +++
Sbjct: 280 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 339
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C A+ LL M E + + FN+L++ K G + + EM I P
Sbjct: 340 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 399
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
D+ TYN + N A+ + + M + D TF+ + +Y A ++ +
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAKHMFDLM-----ASPDVVTFNTIIDVYCRAKRVDEGMQL 454
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVL 309
L+E+ R + + Y LI + + NL+ +++ + P+T + L +
Sbjct: 455 LREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL--LYGF 512
Query: 310 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 369
+ L A + F+ + D N++I K +++ A +L G +P+
Sbjct: 513 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 572
Query: 370 KTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVD 427
+T+ + + + A K D G P + T T +R + ++D
Sbjct: 573 QTYNVMISGFCGKSAISDANVLFHKMKDNGHE------PDNSTYNTLIRGCLKAGEID 624
Score = 35.8 bits (81), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 6/126 (4%)
Query: 74 ALKLSE--NMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP--ETSKNHLTYGSL 129
AL+L E M K ++ + IH + K +D A + F LP + TY +
Sbjct: 521 ALELFEVIQMSKIDLDTVAYNIIIHG--MCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVM 578
Query: 130 LNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSI 189
++ +C + A L KMK+ + +N+L+ K G +K +I EM+++
Sbjct: 579 ISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGF 638
Query: 190 MPDSYT 195
D++T
Sbjct: 639 SGDAFT 644
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/363 (20%), Positives = 146/363 (40%), Gaps = 38/363 (10%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP---------------- 117
A++L ME+R + +I +D + K +D A N F ++
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 118 ---------------------ETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGF 156
+ S N +T+ L++ + KE +A+ LL++M + +
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 157 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 216
+++ +NSL+ + K E+ ++ M + PD T+N+ + N I +
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426
Query: 217 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 276
EM G V A+ T++ L + ++G E A++ +E+ +R D+ +Y+ L+
Sbjct: 427 REMSLRG-VIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485
Query: 277 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 336
G L + I+ + + Y+ +I + N + A F D R
Sbjct: 486 NGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARA 545
Query: 337 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 396
N+MI ++ L A+ L + G P+ T+ I +L + D A + +E+
Sbjct: 546 YNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMK 605
Query: 397 DTG 399
+G
Sbjct: 606 SSG 608
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 121/275 (44%), Gaps = 5/275 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TYG +LN CK T A LL KM+E N+ ++ ++ ++ K G + +
Sbjct: 227 NEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLF 286
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYV 240
EM+ D TYN + +++ +M KR +++ + TFS L +V
Sbjct: 287 NEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR--KISPNVVTFSVLIDSFV 344
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 300
+ G +A++ LKE+ R + Y LI + + L E ++ L ++ +I
Sbjct: 345 KEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMV-DLMISKGCDPDI 403
Query: 301 SYLN-MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 359
N +I + + F+E + N ++ + + G+LE A++L +
Sbjct: 404 MTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQE 463
Query: 360 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
R P+ +++I D NG+++ A++ K
Sbjct: 464 MVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGK 498
Score = 72.4 bits (176), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 117/267 (43%), Gaps = 5/267 (1%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+T +L+N C A L+++M E + + + ++ + K+G ++++
Sbjct: 194 ITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRK 253
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ +I D+ Y++ + L + A + EM+ G AD T++ L + AG
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG-FKADIITYNTLIGGFCNAG 312
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANIS 301
++ + L+++ R ++ + LI + + G L E ++ + + R PNT I+
Sbjct: 313 RWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNT--IT 370
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y ++I L A + S DI N++I Y K R+++ EL
Sbjct: 371 YNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMS 430
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLA 388
RG N T+ + ++G +++A
Sbjct: 431 LRGVIANTVTYNTLVQGFCQSGKLEVA 457
Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 125/301 (41%), Gaps = 3/301 (0%)
Query: 76 KLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCY 133
KL +M KR ++ V ++ +D K + A+ ++ + + N +TY SL++ +
Sbjct: 319 KLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGF 378
Query: 134 CKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDS 193
CKE E+A +++ M M FN L+ Y K + + +EM ++ ++
Sbjct: 379 CKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANT 438
Query: 194 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 253
TYN ++ + A+++ +EM RV D ++ L + G EKA
Sbjct: 439 VTYNTLVQGFCQSGKLEVAKKLFQEMVSR-RVRPDIVSYKILLDGLCDNGELEKALEIFG 497
Query: 254 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLK 313
++E D+ Y +I + + + ++ SL L +Y MI L
Sbjct: 498 KIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKD 557
Query: 314 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 373
L A+ F++ D N++I A+ + A EL E + G + T +
Sbjct: 558 SLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVK 617
Query: 374 I 374
+
Sbjct: 618 M 618
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/337 (19%), Positives = 138/337 (40%), Gaps = 9/337 (2%)
Query: 125 TYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM 184
T ++NC+C+ A + + K+ +L ++ FN+L+ + ++ M
Sbjct: 125 TLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRM 184
Query: 185 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 244
P T N + L +S A +I+ M G + T+ + ++ ++G
Sbjct: 185 VEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETG-FQPNEVTYGPVLNVMCKSGQ 243
Query: 245 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 304
A L+++E RN D Y +I + G+L + ++ + + I+Y
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNT 303
Query: 305 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
+I N K ++ + ++ +V+I ++ KEG+L A++L + +RG
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRG 363
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 424
PN T+ D + + ++ A+ ++ I G P T + + +
Sbjct: 364 IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG------CDPDIMTFNILINGYCKAN 417
Query: 425 DV-DGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 460
+ DG E F E+ + V V + L++ + +G+
Sbjct: 418 RIDDGLELFREMSLRGVIANTV-TYNTLVQGFCQSGK 453
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/339 (18%), Positives = 123/339 (36%), Gaps = 42/339 (12%)
Query: 157 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS---------SIM----------------- 190
+ + FN L + AKT E + A+ ++M++ SIM
Sbjct: 87 TVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTM 146
Query: 191 ---------PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
PD+ +N + L +S A +++ M G T + L +
Sbjct: 147 GKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH-KPTLITLNTLVNGLCL 205
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G A + + + Y ++ + ++G + + R + +
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y +I L L A F E E DI N +IG + GR ++ +L
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
+R PN T+ + D +++ G ++ A L++ + G P++ T + + F
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRG------IAPNTITYNSLIDGFC 379
Query: 422 QEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 460
+E ++ A ++++ D + F LI Y A R
Sbjct: 380 KENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR 418
Score = 36.6 bits (83), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 60/160 (37%), Gaps = 38/160 (23%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLP--ETSKNHLTYGSLLN 131
AL++ +EK M + I + + +D A + F LP + Y +++
Sbjct: 492 ALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMIS 551
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
C++ KA+ L KM E GH P
Sbjct: 552 ELCRKDSLSKADILFRKMTE-------------------EGHA----------------P 576
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTT 231
D TYN+ +RA +D + A +IEEMK G AD +T
Sbjct: 577 DELTYNILIRAHLGDDDATTAAELIEEMKSSG-FPADVST 615
>sp|Q0WVV0|PPR31_ARATH Pentatricopeptide repeat-containing protein At1g10910,
chloroplastic OS=Arabidopsis thaliana GN=At1g10910 PE=2
SV=1
Length = 664
Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 118/259 (45%), Gaps = 2/259 (0%)
Query: 124 LTYGSLL-NCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQ 182
+TY +LL C + KA L+ ++ + S+ + +++ + A G E+ IQ
Sbjct: 202 VTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQ 261
Query: 183 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 242
+MK P+ Y Y+ + + + D A+ ++ EMK G V + + L +Y++
Sbjct: 262 QMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVP-NKVMMTTLLKVYIKG 320
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY 302
GLF+++ L ELE+ + Y L+ + G L E I+ ++ + +
Sbjct: 321 GLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYAN 380
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 362
MI L K A++ ++ E+ D+ + N M+ AY + G +E+ + ++
Sbjct: 381 SIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDE 440
Query: 363 RGADPNAKTWEIFSDYYLR 381
+ P+ T+ I Y+++
Sbjct: 441 QAVSPDYNTFHILIKYFIK 459
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 86/184 (46%), Gaps = 3/184 (1%)
Query: 109 AENYF--VDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMT 166
AEN+ + + S N Y SLLN Y + +KA+ L+ +MK + L + + +L+
Sbjct: 256 AENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLK 315
Query: 167 LYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA 226
+Y K G ++ ++ E++++ + Y + M L+ + A + ++MK G V
Sbjct: 316 VYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKG-VR 374
Query: 227 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 286
+D S + S + F++A+ ++ E DL ++ Y + G + V R+
Sbjct: 375 SDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRM 434
Query: 287 WRSL 290
+ +
Sbjct: 435 MKKM 438
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 10/209 (4%)
Query: 162 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV-NDISGAERVIEEMK 220
NS+++ K G + + +MK + PD TYN + V N A +I E+
Sbjct: 170 NSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELP 229
Query: 221 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 280
+G + D + + +I G E+AE +++++ ++ Y L+ Y G+
Sbjct: 230 HNG-IQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDY 288
Query: 281 ---SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES-GCATYDIRV 336
E+ +S+ L PN ++ L + + L D + + E ES G A ++
Sbjct: 289 KKADELMTEMKSIGLV-PNKVMMTTLLKVYIKGGLFD--RSRELLSELESAGYAENEMPY 345
Query: 337 TNVMIGAYAKEGRLENAEELKERARRRGA 365
+M G +K G+LE A + + + +G
Sbjct: 346 CMLMDG-LSKAGKLEEARSIFDDMKGKGV 373
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 120/274 (43%), Gaps = 3/274 (1%)
Query: 122 NHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAII 181
N +TYG +LN CK T A LL KM+E N+ ++ ++ ++ K G + +
Sbjct: 227 NAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLF 286
Query: 182 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 241
EM+ I + TYN+ + +++ +M + ++ + TFS L +V+
Sbjct: 287 NEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR-KINPNVVTFSVLIDSFVK 345
Query: 242 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 301
G +AE KE+ +R D Y LI + + +L + ++ L ++ NI
Sbjct: 346 EGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV-DLMVSKGCDPNIR 404
Query: 302 YLN-MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
N +I + + F++ D N +I + + G+L A+EL +
Sbjct: 405 TFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEM 464
Query: 361 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
R PN T++I D NG+ + A++ EK
Sbjct: 465 VSRKVPPNIVTYKILLDGLCDNGESEKALEIFEK 498
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 134/329 (40%), Gaps = 15/329 (4%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLN 131
A L ME +G+ + I + D D+ + + N +T+ L++
Sbjct: 282 AFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLID 341
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+ KE +AE L ++M + ++ + SL+ + K H +K ++ M + P
Sbjct: 342 SFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDP 401
Query: 192 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 251
+ T+N+ + N I + +M G V AD T++ L + E G A+
Sbjct: 402 NIRTFNILINGYCKANRIDDGLELFRKMSLRG-VVADTVTYNTLIQGFCELGKLNVAKEL 460
Query: 252 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 311
+E+ +R ++ Y+ L+ G + I+ + + +I N+I
Sbjct: 461 FQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKS-KMELDIGIYNII----- 514
Query: 312 LKDLPGAEKCFKEWESGCATY------DIRVTNVMIGAYAKEGRLENAEELKERARRRGA 365
+ + A K W+ C+ ++ N+MIG K+G L AE L + G
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGH 574
Query: 366 DPNAKTWEIFSDYYLRNGDMKLAVDCLEK 394
P+ T+ I +L +GD +V +E+
Sbjct: 575 APDGWTYNILIRAHLGDGDATKSVKLIEE 603
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/347 (19%), Positives = 136/347 (39%), Gaps = 42/347 (12%)
Query: 114 VDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGH 173
++L + N T ++NC+C+ A + + K+ +L +++ F++L+ G
Sbjct: 114 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 173
Query: 174 PEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFS 233
+ ++ M PD T N + L + A +I++M G + T+
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYG-CQPNAVTYG 232
Query: 234 NLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 293
+ ++ ++G A L+++E RN D Y +I + G+L + +
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNL------- 285
Query: 294 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
F E E T +I N++IG + GR ++
Sbjct: 286 ----------------------------FNEMEMKGITTNIITYNILIGGFCNAGRWDDG 317
Query: 354 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETI 413
+L +R +PN T+ + D +++ G ++ A + ++ I G P + T
Sbjct: 318 AKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG------IAPDTITY 371
Query: 414 RTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 460
+ + F +E +D A ++++ D + F LI Y A R
Sbjct: 372 TSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANR 418
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/340 (18%), Positives = 145/340 (42%), Gaps = 11/340 (3%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+T +L+N C +A L++KM E +++ + ++ + K+G ++++
Sbjct: 194 ITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRK 253
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ +I D+ Y++ + L + A + EM+ G + + T++ L + AG
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG-ITTNIITYNILIGGFCNAG 312
Query: 244 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANIS 301
++ + L+++ R + ++ + LI + + G L E + + + R P+T I+
Sbjct: 313 RWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT--IT 370
Query: 302 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 361
Y ++I L A + S +IR N++I Y K R+++ EL +
Sbjct: 371 YTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMS 430
Query: 362 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 421
RG + T+ + G + +A + ++ + K P+ T + +
Sbjct: 431 LRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR------KVPPNIVTYKILLDGLC 484
Query: 422 QEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 461
+ + A E ++K+ +L + ++ +I A +
Sbjct: 485 DNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 524
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 134/318 (42%), Gaps = 9/318 (2%)
Query: 69 KLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETS--KNHLTY 126
K Y L L + ME +G+ + +I ++ + + + A + + + N +T+
Sbjct: 102 KQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITF 161
Query: 127 GSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKA 186
+L+N C E +A L+++M E+ + N+L+ +G + +I +M
Sbjct: 162 STLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVE 221
Query: 187 SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE 246
P++ TY + + + A ++ +M+ + + D +S + + G +
Sbjct: 222 YGCQPNAVTYGPVLNVMCKSGQTALAMELLRKME-ERNIKLDAVKYSIIIDGLCKHGSLD 280
Query: 247 KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLN 304
A E+E + ++ Y LI + G + ++ R + R PN S L
Sbjct: 281 NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVL- 339
Query: 305 MIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 363
I V L AE+ KE G A I T+ +I + KE L+ A ++ + +
Sbjct: 340 -IDSFVKEGKLREAEELHKEMIHRGIAPDTITYTS-LIDGFCKENHLDKANQMVDLMVSK 397
Query: 364 GADPNAKTWEIFSDYYLR 381
G DPN +T+ I + Y +
Sbjct: 398 GCDPNIRTFNILINGYCK 415
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 87/199 (43%), Gaps = 44/199 (22%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLV---AKVQGIDAAENYFVDLP--ETSKNHLTYGS 128
L+L M RG+ V+D + L+ ++ ++ A+ F ++ + N +TY
Sbjct: 422 GLELFRKMSLRGV---VADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKI 478
Query: 129 LLNCYCKELMTEKAEALLEKMK----ELNLG---------------------FSSMP--- 160
LL+ C +EKA + EK++ EL++G F S+P
Sbjct: 479 LLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 538
Query: 161 -------FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAE 213
+N ++ K G + + ++M+ PD +TYN+ +RA D + +
Sbjct: 539 VKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSV 598
Query: 214 RVIEEMKRDGRVAADWTTF 232
++IEE+KR G + D +T
Sbjct: 599 KLIEELKRCG-FSVDASTI 616
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 79.0 bits (193), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 137/343 (39%), Gaps = 17/343 (4%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
AL L MEK + V +D + K + +D A + F ++ + TY L++
Sbjct: 234 ALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLIS 293
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM-KASSIM 190
C C A LL M E N+ + FN+L+ + K G + + EM K+
Sbjct: 294 CLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCF 353
Query: 191 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 250
PD YN ++ + V EM + G V + T++ L + +A + A+
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG-NTVTYTTLIHGFFQARDCDNAQM 412
Query: 251 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 310
K++ + H D+ Y L+ GN+ ++ ++ ++Y MI+ L
Sbjct: 413 VFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALC 472
Query: 311 NLKDLPGAEKCFKEWESGCATY------DIRVTNVMIGAYAKEGRLENAEELKERARRRG 364
A K W+ C+ ++ M+ + ++G E A+ L + G
Sbjct: 473 K------AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDG 526
Query: 365 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG-RGDGGKW 406
PN+ T+ LR+GD + + +++ G GD +
Sbjct: 527 PLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF 569
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 116/252 (46%), Gaps = 6/252 (2%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+TYG+++N CK + A LL KM++ + + +N+++ K H + + +
Sbjct: 216 VTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNK 275
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 243
M+ I PD +TYN + L S A R++ +M + + D F+ L +V+ G
Sbjct: 276 METKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM-LEKNINPDLVFFNALIDAFVKEG 334
Query: 244 LFEKAERALKEL-ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWR--SLRLAFPNTANI 300
+AE+ E+ ++++ D+ AY LI + + + E ++R S R NT +
Sbjct: 335 KLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT--V 392
Query: 301 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 360
+Y +I +D A+ FK+ S DI N+++ G +E A + E
Sbjct: 393 TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYM 452
Query: 361 RRRGADPNAKTW 372
++R + T+
Sbjct: 453 QKRDMKLDIVTY 464
Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 135/337 (40%), Gaps = 15/337 (4%)
Query: 120 SKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA 179
S N TY +N +C+ A A+L KM +L G S + NSL+ + + A
Sbjct: 107 SHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVA 166
Query: 180 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 239
++ +M PD+ T+ + L N S A ++E M G D T+ + +
Sbjct: 167 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG-CQPDLVTYGAVINGL 225
Query: 240 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 299
+ G + A L ++E D+ Y +I + ++ + + ++ +
Sbjct: 226 CKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDV 285
Query: 300 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL-KE 358
+Y +I L N A + + D+ N +I A+ KEG+L AE+L E
Sbjct: 286 FTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDE 345
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 418
+ + P+ + + + ++ ++ + G V ++ T T +
Sbjct: 346 MVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRG------LVGNTVTYTTLIH 399
Query: 419 HFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 455
F Q +D D A+ + K+ V D GV P I TY
Sbjct: 400 GFFQARDCDNAQ---MVFKQMVSD-GV---HPDIMTY 429
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/231 (18%), Positives = 99/231 (42%), Gaps = 4/231 (1%)
Query: 124 LTYGSLLNCYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE 183
+ Y +L+ +CK E+ + +M + L +++ + +L+ + + + + ++
Sbjct: 357 VAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 416
Query: 184 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYVEA 242
M + + PD TYN+ + L ++ A V E M KRD ++ D T++ + +A
Sbjct: 417 MVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKL--DIVTYTTMIEALCKA 474
Query: 243 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY 302
G E L + ++ Y +++ + + G E ++ ++ P + +Y
Sbjct: 475 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTY 534
Query: 303 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 353
+I+ + D + + KE S C T ++ +GRL+ +
Sbjct: 535 NTLIRARLRDGDEAASAELIKEMRS-CGFAGDASTFGLVTNMLHDGRLDKS 584
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 65/132 (49%), Gaps = 2/132 (1%)
Query: 74 ALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLN 131
AL + E M+KR M + ++ + K ++ + F + L N +TY ++++
Sbjct: 445 ALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMS 504
Query: 132 CYCKELMTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMP 191
+C++ + E+A+AL +MKE +S +N+L+ + G +I+EM++
Sbjct: 505 GFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAG 564
Query: 192 DSYTYNVWMRAL 203
D+ T+ + L
Sbjct: 565 DASTFGLVTNML 576
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/397 (22%), Positives = 154/397 (38%), Gaps = 53/397 (13%)
Query: 97 LDLVAKVQGIDAAENYF--VDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKMKELNL 154
L +AK++ D ++ +++ S N TY ++NC C+ A A+L KM +L
Sbjct: 72 LSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGY 131
Query: 155 GFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAER 214
G S + NSL+ + + A++ +M PD+ T+ + L N S A
Sbjct: 132 GPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVA 191
Query: 215 VIEEM--------------------KRD--------------GRVAADWTTFSNLASIYV 240
++E M KR G++ AD +S +
Sbjct: 192 LVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLC 251
Query: 241 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTA 298
+ + A E++N+ D+ Y LI+ G S+ R+ + R PN
Sbjct: 252 KYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNV- 310
Query: 299 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 358
+++ ++I L AEK F E +I N +I + RL+ A+++
Sbjct: 311 -VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFT 369
Query: 359 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 418
+ P+ T+ + + + K VD +E D R V ++ T T +
Sbjct: 370 LMVSKDCLPDVVTYNTLINGFCK---AKKVVDGMELFRDMSR---RGLVGNTVTYTTLIH 423
Query: 419 HFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 455
F Q D D A+ + K+ V D GV P I TY
Sbjct: 424 GFFQASDCDNAQ---MVFKQMVSD-GV---HPNIMTY 453
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 98/426 (23%), Positives = 180/426 (42%), Gaps = 35/426 (8%)
Query: 24 ALYDRLFKKGSSDVSVRQQLNQFLKSK---KRVFKWEVGDTLKKLRDRKLYYPALKLSEN 80
A+ + L K+G D+++ LN+ K K V V D+L K R AL L
Sbjct: 210 AVINGLCKRGEPDLAL-NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVD---DALNLFTE 265
Query: 81 MEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPE--TSKNHLTYGSLLNCYCKELM 138
M+ +G+ V + + + A D+ E + N +T+ SL++ + KE
Sbjct: 266 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGK 325
Query: 139 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 198
+AE L ++M + ++ + + +NSL+ + ++ I M + +PD TYN
Sbjct: 326 LIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNT 385
Query: 199 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 258
+ + + +M R G V + T++ L + +A + A+ K++ +
Sbjct: 386 LINGFCKAKKVVDGMELFRDMSRRGLV-GNTVTYTTLIHGFFQASDCDNAQMVFKQMVSD 444
Query: 259 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 318
H ++ Y L+ + G L + ++ L+ + +I N++ + + A
Sbjct: 445 GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS-KMEPDIYTYNIMS-----EGMCKA 498
Query: 319 EKCFKEWESGCATY------DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 372
K W+ C+ D+ N MI + K+G E A L + + G P++ T+
Sbjct: 499 GKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTY 558
Query: 373 EIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDG--AE 430
+LR+GD K A L K + + R G S+ + T M H DG +
Sbjct: 559 NTLIRAHLRDGD-KAASAELIKEMRSCRFAGD---ASTYGLVTDMLH-------DGRLDK 607
Query: 431 GFLEIL 436
GFLE+L
Sbjct: 608 GFLEVL 613
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 176,094,620
Number of Sequences: 539616
Number of extensions: 7322350
Number of successful extensions: 26465
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 276
Number of HSP's successfully gapped in prelim test: 214
Number of HSP's that attempted gapping in prelim test: 22310
Number of HSP's gapped (non-prelim): 2102
length of query: 490
length of database: 191,569,459
effective HSP length: 122
effective length of query: 368
effective length of database: 125,736,307
effective search space: 46270960976
effective search space used: 46270960976
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)