BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011236
(490 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255573349|ref|XP_002527601.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533018|gb|EEF34782.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 502
Score = 655 bits (1691), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/492 (65%), Positives = 393/492 (79%), Gaps = 6/492 (1%)
Query: 1 MASKLFSTIFNNKRNFTKTNLEIFTRAYRAVKPVARNNLYSRISPLGDPDVSLTPVLDQW 60
MAS F TI KR + T I TR Y A N L++RISPLG+PD+SL PVLD W
Sbjct: 1 MASTRFFTIL--KRTQSLTANAILTRRYYNKARTASNTLFARISPLGEPDISLVPVLDNW 58
Query: 61 VLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLA-FSVHDHAVQLDLIGKVRG 119
V EG+KI ELQ++IR LR +R+ ALQVSEWM+G+G + FS DHAVQLDLIG+VRG
Sbjct: 59 VQEGKKIRGFELQKIIRDLRCHRRYTQALQVSEWMNGKGQSGFSPADHAVQLDLIGRVRG 118
Query: 120 LESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM 179
LESAE+YF +L ++D+ DK YGALLNCYVREGLVD+SL MQKMKE+G S LNYN +M
Sbjct: 119 LESAESYFQNLVNQDRNDKTYGALLNCYVREGLVDKSLYHMQKMKELGFASSPLNYNDLM 178
Query: 180 CLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHI 239
CLYT TGQ EK+ DVL +MKENG+ PD FSYRIC++S ARS+L +E +L+EME+QSHI
Sbjct: 179 CLYTRTGQLEKVTDVLSEMKENGITPDLFSYRICMSSCAARSDLKGVEEILEEMENQSHI 238
Query: 240 SMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMM 299
S+DW TYSTVA+ Y+ A LKEKA+IYLKKCE V++ DALGYNHLIS ASLG KDE+M
Sbjct: 239 SIDWVTYSTVASIYVKASLKEKALIYLKKCEQKVNR--DALGYNHLISLNASLGIKDEVM 296
Query: 300 KFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGY 359
+ WGL K KCKKQ+NRDYITMLG+LVK+ ELEEA+K+L+EWE SC CYDFRVPN++L+GY
Sbjct: 297 RLWGLVKTKCKKQVNRDYITMLGALVKLEELEEADKLLQEWESSCQCYDFRVPNVLLIGY 356
Query: 360 SQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKF 419
Q+G+IEKA+A+LK+IVKK K PTPNSW+IIAAGY +K NMEKAF CMKEAL V ENK
Sbjct: 357 CQQGLIEKAEAMLKDIVKKQKNPTPNSWAIIAAGYVNKQNMEKAFNCMKEALTVQAENKG 416
Query: 420 WRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQK-RNMYHALTEAHIRSGQEVDGLL 478
WRPK +L+SSIL WLG+N DVE+VEAFV+ L+ KV K R +YH L +A+IR G++VDG+L
Sbjct: 417 WRPKANLISSILSWLGENGDVEDVEAFVNLLETKVPKDREIYHTLIKAYIRGGKQVDGVL 476
Query: 479 ESMKADDIDEDK 490
E+M A+ IDED+
Sbjct: 477 ENMTANKIDEDE 488
>gi|302143027|emb|CBI20322.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/494 (64%), Positives = 396/494 (80%), Gaps = 8/494 (1%)
Query: 1 MASKLFSTIFNNKRNFTKTNLEIFTRAYRAVKP--VARNNLYSRISPLGDPDVSLTPVLD 58
MAS +F+ + +N R+ ++T + + R+V A NLYSRISPLG P++SL PVLD
Sbjct: 1 MASSIFNRLKSN-RHVSQTLISNVC-SVRSVYTGRFANINLYSRISPLGTPNLSLVPVLD 58
Query: 59 QWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLA-FSVHDHAVQLDLIGKV 117
QWV EG+K+ ++EL R+IR LRSRKR+ AL+VSEWMS + L FS AVQLDLIG+V
Sbjct: 59 QWVEEGKKVRDVELHRIIRDLRSRKRYAQALEVSEWMSSKELCPFSPSARAVQLDLIGQV 118
Query: 118 RGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNG 177
RGLESAE YFN+++ E+K+DK+YGALLNCYVRE ++D+SLS +QKMKE+G + L YNG
Sbjct: 119 RGLESAENYFNNMSAEEKIDKMYGALLNCYVRERVIDKSLSHLQKMKELGFASTPLPYNG 178
Query: 178 IMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS 237
+MCLY NT Q EKIPDVL +M+ENG+ PDNFSYR+CINSYGARS+L+SME +L+EMES+S
Sbjct: 179 LMCLYINTDQLEKIPDVLSEMQENGISPDNFSYRLCINSYGARSDLNSMEKILEEMESKS 238
Query: 238 HISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDE 297
HI +DW TYS VAN+YI AGL EKA+ +LKK E + K D LGYNHLIS YASLG+K E
Sbjct: 239 HIHIDWMTYSMVANFYIKAGLNEKALFFLKKAETKLHK--DPLGYNHLISLYASLGSKAE 296
Query: 298 MMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL 357
MM+ W +K KK +NRDYITMLGSLVK+GELE+ E +L+EWE S CYDFRVPN +L+
Sbjct: 297 MMRLWERRKTASKKLINRDYITMLGSLVKLGELEDTEALLKEWESSGNCYDFRVPNTLLI 356
Query: 358 GYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEEN 417
G+ QKG+IEKA+++L++IV++GKTPTPNSWSI+AAGY +K NMEKAFECMKEA+AV EN
Sbjct: 357 GFCQKGLIEKAESMLRDIVEEGKTPTPNSWSIVAAGYIEKQNMEKAFECMKEAIAVLAEN 416
Query: 418 KFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKV-QKRNMYHALTEAHIRSGQEVDG 476
K WRPKP ++SSIL WLGDNRDVEEVE FVS+LK + R MYHA A IR+G+EVDG
Sbjct: 417 KGWRPKPKVISSILSWLGDNRDVEEVETFVSALKAVIPMDREMYHAQIRASIRAGKEVDG 476
Query: 477 LLESMKADDIDEDK 490
+L+SMKAD IDED+
Sbjct: 477 ILDSMKADKIDEDE 490
>gi|225461407|ref|XP_002282230.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial [Vitis vinifera]
Length = 504
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/494 (64%), Positives = 396/494 (80%), Gaps = 8/494 (1%)
Query: 1 MASKLFSTIFNNKRNFTKTNLEIFTRAYRAVKP--VARNNLYSRISPLGDPDVSLTPVLD 58
MAS +F+ + +N R+ ++T + + R+V A NLYSRISPLG P++SL PVLD
Sbjct: 1 MASSIFNRLKSN-RHVSQTLISNVC-SVRSVYTGRFANINLYSRISPLGTPNLSLVPVLD 58
Query: 59 QWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLA-FSVHDHAVQLDLIGKV 117
QWV EG+K+ ++EL R+IR LRSRKR+ AL+VSEWMS + L FS AVQLDLIG+V
Sbjct: 59 QWVEEGKKVRDVELHRIIRDLRSRKRYAQALEVSEWMSSKELCPFSPSARAVQLDLIGQV 118
Query: 118 RGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNG 177
RGLESAE YFN+++ E+K+DK+YGALLNCYVRE ++D+SLS +QKMKE+G + L YNG
Sbjct: 119 RGLESAENYFNNMSAEEKIDKMYGALLNCYVRERVIDKSLSHLQKMKELGFASTPLPYNG 178
Query: 178 IMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS 237
+MCLY NT Q EKIPDVL +M+ENG+ PDNFSYR+CINSYGARS+L+SME +L+EMES+S
Sbjct: 179 LMCLYINTDQLEKIPDVLSEMQENGISPDNFSYRLCINSYGARSDLNSMEKILEEMESKS 238
Query: 238 HISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDE 297
HI +DW TYS VAN+YI AGL EKA+ +LKK E + K D LGYNHLIS YASLG+K E
Sbjct: 239 HIHIDWMTYSMVANFYIKAGLNEKALFFLKKAETKLHK--DPLGYNHLISLYASLGSKAE 296
Query: 298 MMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL 357
MM+ W +K KK +NRDYITMLGSLVK+GELE+ E +L+EWE S CYDFRVPN +L+
Sbjct: 297 MMRLWERRKTASKKLINRDYITMLGSLVKLGELEDTEALLKEWESSGNCYDFRVPNTLLI 356
Query: 358 GYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEEN 417
G+ QKG+IEKA+++L++IV++GKTPTPNSWSI+AAGY +K NMEKAFECMKEA+AV EN
Sbjct: 357 GFCQKGLIEKAESMLRDIVEEGKTPTPNSWSIVAAGYIEKQNMEKAFECMKEAIAVLAEN 416
Query: 418 KFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKV-QKRNMYHALTEAHIRSGQEVDG 476
K WRPKP ++SSIL WLGDNRDVEEVE FVS+LK + R MYHA A IR+G+EVDG
Sbjct: 417 KGWRPKPKVISSILSWLGDNRDVEEVETFVSALKAVIPMDREMYHAQIRASIRAGKEVDG 476
Query: 477 LLESMKADDIDEDK 490
+L+SMKAD IDED+
Sbjct: 477 ILDSMKADKIDEDE 490
>gi|224114960|ref|XP_002316903.1| predicted protein [Populus trichocarpa]
gi|222859968|gb|EEE97515.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 619 bits (1596), Expect = e-174, Method: Compositional matrix adjust.
Identities = 296/439 (67%), Positives = 365/439 (83%), Gaps = 4/439 (0%)
Query: 38 NLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSG 97
NLYSRISPLGDP +SL PVLDQWV EG+K+ + EL+ +++ LR RKRFK AL+VS+WMS
Sbjct: 1 NLYSRISPLGDPRISLAPVLDQWVEEGKKVKDYELRTIVKGLRERKRFKQALEVSQWMSS 60
Query: 98 QGLA-FSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDES 156
L FS D AV+LDLIGKV GLESAE+YF +L+++DK+ K YGALLNCYVR GLV++S
Sbjct: 61 NRLCNFSPSDDAVRLDLIGKVHGLESAESYFKNLDEKDKIHKTYGALLNCYVRGGLVEKS 120
Query: 157 LSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINS 216
LS +QKMKE+G F +ALNYN +MCLY NTG EK+PDVL DMKENG+ PD FSYRIC+ S
Sbjct: 121 LSHVQKMKELGFFSTALNYNDLMCLYVNTGLLEKVPDVLSDMKENGISPDLFSYRICLKS 180
Query: 217 YGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS 276
YG RS+ ++E +L+EMESQSHISMDW T++TVAN Y+ AGLKEKA++YLKKCE+ V+K
Sbjct: 181 YGERSDFDNVEKILREMESQSHISMDWRTFATVANIYLEAGLKEKALVYLKKCEEKVNK- 239
Query: 277 KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKM 336
+ALGYNHLIS YASLGNKDEMM+ W L K CKKQLNRDYIT+LGSLVK+G LEEAEK+
Sbjct: 240 -NALGYNHLISLYASLGNKDEMMRLWELAKANCKKQLNRDYITILGSLVKLGHLEEAEKL 298
Query: 337 LEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYAD 396
L++WE SC YDFRVPN++L+GYS+KG+ EKA+A+L++I++K K P+SWSII+AGY D
Sbjct: 299 LQDWESSCQYYDFRVPNVVLIGYSRKGLPEKAEAMLQDIIEKQKMKNPSSWSIISAGYMD 358
Query: 397 KNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQK 456
K NMEKAFECMKEALA EN WRPKP+++S+IL+WLGDNRD +EVEAFV L+ KV K
Sbjct: 359 KQNMEKAFECMKEALAAETENNGWRPKPAMISNILNWLGDNRDAQEVEAFVGLLETKVPK 418
Query: 457 -RNMYHALTEAHIRSGQEV 474
R MYHAL +++IR G+EV
Sbjct: 419 SREMYHALIKSYIRCGKEV 437
>gi|359483464|ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Vitis vinifera]
Length = 506
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 293/495 (59%), Positives = 371/495 (74%), Gaps = 7/495 (1%)
Query: 1 MASKLFSTIFNNKRNFTKTNLE---IFTRAYRAVKPVARNNLYSRISPLGDPDVSLTPVL 57
M S+LFS + + + + ++ + I R Y + + +LY++ISPLGDP+ S+ P L
Sbjct: 1 MDSRLFSLLRQSIQQYPQSLIRKNPISNRTYYTSR-YGKISLYNKISPLGDPNTSVVPEL 59
Query: 58 DQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGK 116
D WV G K+ ELQR+I LR RKRF AL++SEWMS +G+ AFS +HAVQLDLIG+
Sbjct: 60 DNWVQNGNKVWVAELQRIIHDLRKRKRFSQALEISEWMSKKGICAFSPTEHAVQLDLIGR 119
Query: 117 VRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYN 176
VRG SAE+YFNSL + DK DK YGALLNCYVR+ D+SLS +QKMKEMG S L YN
Sbjct: 120 VRGFLSAESYFNSLQNHDKTDKTYGALLNCYVRQRQTDKSLSHLQKMKEMGFASSPLTYN 179
Query: 177 GIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQ 236
IMCLYTN GQHEK+PDVL +MK++ V PDNFSYRICINSYGA+S++ MENVL+EME Q
Sbjct: 180 DIMCLYTNVGQHEKVPDVLTEMKQSNVYPDNFSYRICINSYGAQSDIQGMENVLKEMERQ 239
Query: 237 SHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKD 296
HI MDW TY+ AN+YI AGL +KAI LKK E+ + K +D LGYNHLIS YASLGNK
Sbjct: 240 PHIVMDWNTYAVAANFYIKAGLPDKAIEALKKSEERLDK-RDGLGYNHLISLYASLGNKA 298
Query: 297 EMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIIL 356
E+++ W L+K CK+ +NRDYITML SLV++GELEEAEK+L EWE S CYDFRVPNI++
Sbjct: 299 EVLRLWSLEKSACKRNINRDYITMLESLVRLGELEEAEKVLREWESSGNCYDFRVPNIVI 358
Query: 357 LGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEE 416
+GYS+KG+ EKA+A+LKE+++KGK TPNSW +A+GY D+ MEKA ECMK A+++H
Sbjct: 359 IGYSEKGLFEKAEAMLKELMEKGKITTPNSWGTVASGYMDEGEMEKAVECMKAAISLHVN 418
Query: 417 NKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKV-QKRNMYHALTEAHIRSGQEVD 475
NK +P +++ IL WLGD VE+VEAFV SL+I + R MYH L A+IR+G+EVD
Sbjct: 419 NKGRKPNSRVIAGILSWLGDKGRVEDVEAFVGSLRIVIPMNRRMYHTLIMANIRAGKEVD 478
Query: 476 GLLESMKADDIDEDK 490
GLL SMKAD I ED+
Sbjct: 479 GLLASMKADKIVEDE 493
>gi|147807263|emb|CAN64166.1| hypothetical protein VITISV_006333 [Vitis vinifera]
Length = 506
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 290/495 (58%), Positives = 369/495 (74%), Gaps = 7/495 (1%)
Query: 1 MASKLFSTIFNNKRNFTKTNLE---IFTRAYRAVKPVARNNLYSRISPLGDPDVSLTPVL 57
M S+LFS + + + + ++ + I R Y + + +LY++ISPLGDP+ S+ P L
Sbjct: 1 MDSRLFSLLRQSIQQYPQSLIRKNPISNRTYYTSR-YGKISLYNKISPLGDPNTSVVPEL 59
Query: 58 DQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGK 116
D WV G K+ ELQR+I LR RKRF AL++SEWMS +G+ AFS +HAVQLDLIG+
Sbjct: 60 DNWVQNGNKVWVAELQRIIHDLRKRKRFSQALEISEWMSKKGICAFSPTEHAVQLDLIGR 119
Query: 117 VRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYN 176
VRG SAE+YFNSL + DK DK YGALLNCYVR+ D+SLS +QKMKEMG S L YN
Sbjct: 120 VRGFLSAESYFNSLQNHDKTDKTYGALLNCYVRQRQTDKSLSHLQKMKEMGFASSPLTYN 179
Query: 177 GIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQ 236
IMCLYTN GQHEK+PDVL +MK++ V PDNFSYRICINSY A+S++ ME VL+EME Q
Sbjct: 180 DIMCLYTNVGQHEKVPDVLTEMKQSHVYPDNFSYRICINSYAAQSDIQGMEKVLKEMERQ 239
Query: 237 SHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKD 296
HI MDW TY+ AN+YI AGL +KAI LKK E+ + K +D LGYNHLIS YASLGNK
Sbjct: 240 PHIVMDWNTYAVAANFYIKAGLPDKAIEALKKSEERLDK-RDGLGYNHLISLYASLGNKA 298
Query: 297 EMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIIL 356
E+++ W L+K CK+ +NRDYITML SLV++GELEEAEK+L EWE S CYDFRVPNI++
Sbjct: 299 EVLRLWSLEKSACKRNINRDYITMLESLVRLGELEEAEKVLREWESSGNCYDFRVPNIVI 358
Query: 357 LGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEE 416
+GYS+KG+ EKA+A+LKE+++KGK TP+SW +A+GY D+ MEKA ECMK A+++H
Sbjct: 359 IGYSEKGLFEKAEAMLKELMEKGKITTPDSWGTVASGYMDEGEMEKAVECMKAAISLHVN 418
Query: 417 NKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKV-QKRNMYHALTEAHIRSGQEVD 475
NK +P +++ IL WLGD VE+VEAFV SL+I + R MYH L A+IR+G+EVD
Sbjct: 419 NKGRKPNSRVIAGILSWLGDKGRVEDVEAFVGSLRIVIPMNRRMYHTLIMANIRAGKEVD 478
Query: 476 GLLESMKADDIDEDK 490
GLL SMKAD I ED+
Sbjct: 479 GLLASMKADKIVEDE 493
>gi|356514762|ref|XP_003526072.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Glycine max]
Length = 492
Score = 567 bits (1460), Expect = e-159, Method: Compositional matrix adjust.
Identities = 274/456 (60%), Positives = 350/456 (76%), Gaps = 3/456 (0%)
Query: 36 RNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWM 95
R NLYSRISPLGDP +S+ PVLD+W+ EG + L +I+ LR+R R AL+VSEWM
Sbjct: 31 RRNLYSRISPLGDPSISVVPVLDEWIEEGNAVDGPHLHHIIKILRTRNRNTQALEVSEWM 90
Query: 96 SGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDE 155
S +GL S D AVQLDLIG+V G+ESAE Y SL+D DK K++GALLNCYVREGLVD+
Sbjct: 91 SSKGLPISSRDQAVQLDLIGRVHGVESAERYLQSLSDGDKTWKVHGALLNCYVREGLVDK 150
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
SLSLMQKMK+MG F S LNYN IM LYT T Q+EK+P VL MK++GVPP+ FSYRICIN
Sbjct: 151 SLSLMQKMKDMG-FVSFLNYNNIMSLYTQTQQYEKVPGVLEQMKKDGVPPNIFSYRICIN 209
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK 275
SY R +L+++E +L+EME + HI +DW TYS V N+YI A ++EKA++ L KCE +
Sbjct: 210 SYCVRGDLANVEKLLEEMEREPHIGIDWITYSMVTNFYIKADMREKALVCLMKCEKKTHR 269
Query: 276 SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEK 335
+ + YNHLISH A+L +K MM+ W LQK CKKQLNR+YITMLG LVK+GEL++AEK
Sbjct: 270 G-NTVAYNHLISHNAALRSKGGMMRAWKLQKANCKKQLNREYITMLGCLVKLGELDKAEK 328
Query: 336 MLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYA 395
+L EWELS DFRVPNI+L+GY Q+G++EKA+A+L+++V +GKTP PNSWSI+A+GY
Sbjct: 329 VLGEWELSGNTCDFRVPNILLIGYCQRGLVEKAEALLRKMVAEGKTPIPNSWSIVASGYV 388
Query: 396 DKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK-IKV 454
K NMEKAF+CMKEA+AVH +NK WRPK ++SSI W+ +NRD+EE E FV+S K +
Sbjct: 389 AKENMEKAFQCMKEAVAVHAQNKRWRPKVDVISSIFSWVTNNRDIEEAEDFVNSWKSVNA 448
Query: 455 QKRNMYHALTEAHIRSGQEVDGLLESMKADDIDEDK 490
R MY +L + IR G+ VDG+LESMKAD+I+ D+
Sbjct: 449 MNRGMYLSLMKMCIRYGKHVDGILESMKADNIEIDE 484
>gi|449431834|ref|XP_004133705.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Cucumis sativus]
gi|449478158|ref|XP_004155237.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Cucumis sativus]
Length = 492
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 286/492 (58%), Positives = 370/492 (75%), Gaps = 21/492 (4%)
Query: 2 ASKLFSTIFNNKRNFTKT---NLEIFT----RAYRAVKPVARNNLYSRISPLGDPDVSLT 54
AS +F + + T+T + F R Y + R NLY+RISPLGDP+ ++
Sbjct: 4 ASAMFKILSRSSSGCTRTLRPETDAFCFVALRLYSTRRSCDRRNLYARISPLGDPECTVV 63
Query: 55 PVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDL 113
PVL+QW+ EG+ I + EL+R++R LR+ +R++ AL+VSEWM +GL + + D A+QLDL
Sbjct: 64 PVLNQWIEEGRNIKDFELRRIVRDLRTCRRYRQALEVSEWMCSKGLFSLTTRDFAIQLDL 123
Query: 114 IGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
IG+VRGL+SAE YF S++++ ++ KLYGALLNCYVREGL+D+SL+ MQKMKEMG S L
Sbjct: 124 IGQVRGLDSAEKYFGSVSNQKEIGKLYGALLNCYVREGLIDKSLAHMQKMKEMGLASSPL 183
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
YN IMCLY NTGQ +K+P+VL +MKENGV PDNFSYRICI+SYGARS++ SMENVL+EM
Sbjct: 184 CYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICISSYGARSDVISMENVLKEM 243
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLG 293
E Q+HISMDW TYS VA ++I AG+ +KA+ YL+KCED V +DALG+NHLISHY +LG
Sbjct: 244 EGQTHISMDWTTYSMVAGFFIKAGMHDKAMNYLRKCEDKV--DEDALGFNHLISHYTNLG 301
Query: 294 NKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPN 353
+K+E+M+ W L K K KKQLNRDYITMLGSLVK+ LEEAE ++ EWE SC CYDFRVPN
Sbjct: 302 HKNEVMRLWALLK-KGKKQLNRDYITMLGSLVKLELLEEAENLVMEWESSCQCYDFRVPN 360
Query: 354 IILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAV 413
++L+GYSQKG+IEKA+ +L+ I+ G P+PNSW IIA+GY +K N+EKAFECMKEALAV
Sbjct: 361 VVLIGYSQKGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLEKQNLEKAFECMKEALAV 420
Query: 414 HEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNMYHALTEAHIRSGQE 473
+NK WRPKP+++SSIL WL +NR EE++ F+SSLK +M L A
Sbjct: 421 KGQNKVWRPKPNVLSSILRWLSENRRYEEMKEFMSSLKTVP---SMDEKLNNA------- 470
Query: 474 VDGLLESMKADD 485
+D LLE M DD
Sbjct: 471 LDELLEIMANDD 482
>gi|356555227|ref|XP_003545936.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Glycine max]
Length = 486
Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust.
Identities = 264/475 (55%), Positives = 345/475 (72%), Gaps = 10/475 (2%)
Query: 21 LEIFTRAY---RAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIR 77
+ + +R+Y R+ KP +LYS+ISPLG+P+ S+ PVLD WV +G K+ ELQR+IR
Sbjct: 6 IAVVSRSYYTSRSKKP----SLYSKISPLGNPNTSVVPVLDDWVFKGNKLRVAELQRIIR 61
Query: 78 QLRSRKRFKHALQVSEWMSGQGLA-FSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV 136
LR R RF ALQ+SEWM +G+ FS ++AV LDLIGKV G SAETYF++L D+ K
Sbjct: 62 DLRKRSRFSQALQISEWMHNKGVCIFSPTEYAVHLDLIGKVHGFSSAETYFDALKDQHKT 121
Query: 137 DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
+K YGALLNCYVR+ D++LS +QKMK++G S L YN IMCLYTN GQHEK+PDVL
Sbjct: 122 NKTYGALLNCYVRQRQTDKALSHLQKMKDLGFASSPLTYNDIMCLYTNIGQHEKVPDVLR 181
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
+MK+N V PDNFSYRICINSYG RS+ +E VL+EME+Q +I MDW TYS AN+YI A
Sbjct: 182 EMKQNQVLPDNFSYRICINSYGVRSDFGGVERVLKEMETQPNIVMDWNTYSIAANFYIKA 241
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
GL A+ L+K E+ + +KD GYNHLIS YA LG K+E+M+ W L+K CK+ +NRD
Sbjct: 242 GLTRDAVCALRKSEERLD-NKDGQGYNHLISLYAQLGLKNEVMRIWDLEKNACKRCINRD 300
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
+ T+L SLVK+GEL+EAEK+L+EWE S CYDF +P+I+++GYSQKG+ EKA A+L+E+
Sbjct: 301 FTTLLESLVKLGELDEAEKILKEWESSDNCYDFGIPSIVIIGYSQKGLHEKALAMLEELQ 360
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGD 436
K K TPN WSI+A GY K MEKAF+C K AL+++ ENK W+P +++ +L W+GD
Sbjct: 361 NKEKVTTPNCWSIVAGGYIHKGEMEKAFKCFKTALSLYVENKGWKPNAKVIAELLRWIGD 420
Query: 437 NRDVEEVEAFVSSLKIKVQ-KRNMYHALTEAHIRSGQEVDGLLESMKADDIDEDK 490
N VE+ E VS L+ V R MYH L + +IR G+EVD LL M+ D IDE+K
Sbjct: 421 NGSVEDAEVLVSLLRNAVPVNRQMYHTLIKTYIRGGKEVDDLLGRMEKDGIDENK 475
>gi|255556039|ref|XP_002519054.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541717|gb|EEF43265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 485
Score = 537 bits (1383), Expect = e-150, Method: Compositional matrix adjust.
Identities = 266/470 (56%), Positives = 344/470 (73%), Gaps = 4/470 (0%)
Query: 23 IFTRAYRAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSR 82
+ +R Y A + + LYS+ISPLGDP+ SL P LD WV +G K+ ELQR+IR LR R
Sbjct: 1 MISRYYYANR-TKKVTLYSKISPLGDPNTSLVPELDNWVQDGNKVRVGELQRIIRDLRKR 59
Query: 83 KRFKHALQVSEWMSGQGLA-FSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYG 141
RF AL+VSEWM+ +G+ FS +HAVQLDLIGKVRG SAE YFN+L D DK DK YG
Sbjct: 60 NRFTQALEVSEWMNKKGICIFSSTEHAVQLDLIGKVRGFLSAENYFNNLMDHDKTDKTYG 119
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
ALLNCYVR+ D S+S QKMKEMG S L YN IMCLY N G +EK+ VL +MKEN
Sbjct: 120 ALLNCYVRQRQTDRSISHWQKMKEMGLASSPLAYNDIMCLYINLGLYEKVLHVLTEMKEN 179
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
+ PDNFSYRICINSYGARS++ ME VL EME + +MDW TY+ VAN+YI AGL +K
Sbjct: 180 KISPDNFSYRICINSYGARSDIQGMEKVLNEMECRLGNAMDWNTYAVVANFYIKAGLADK 239
Query: 262 AIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITML 321
A+ L+K E+ + K KD +GYNHLIS YA+LG K E+++ W LQK CK+++NRD++TML
Sbjct: 240 AVDALRKSEEKLDK-KDGIGYNHLISLYATLGIKSEVLRIWDLQKSVCKRRINRDFVTML 298
Query: 322 GSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKT 381
SLVK+G+LEEAEK+L+EWE S YD R+PNI+++GYS+ G+ EKA+A L+ +++KG+
Sbjct: 299 ESLVKLGDLEEAEKVLKEWESSGNFYDVRIPNIVVVGYSKNGLHEKAEASLEALMEKGRA 358
Query: 382 PTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVE 441
TPNSW++IA+GY +K KAFECMK A +++ E K W+P P +V IL WLGD E
Sbjct: 359 TTPNSWAMIASGYLEKGEKAKAFECMKAAFSLNVEKKGWKPNPRVVMDILIWLGDEGSPE 418
Query: 442 EVEAFVSSLKIKVQ-KRNMYHALTEAHIRSGQEVDGLLESMKADDIDEDK 490
+VEAFV+SL + + R +YHAL +A IRSG++ +L+ MK D IDED+
Sbjct: 419 DVEAFVASLSVAIPLNRQIYHALLKAKIRSGRDAHEILDRMKTDKIDEDE 468
>gi|224077120|ref|XP_002305141.1| predicted protein [Populus trichocarpa]
gi|222848105|gb|EEE85652.1| predicted protein [Populus trichocarpa]
Length = 492
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 271/492 (55%), Positives = 341/492 (69%), Gaps = 11/492 (2%)
Query: 1 MASKLFSTIFNNKRNFTKTNLEIFTRAYRAVKPVARNNLYSRISPLGDPDVSLTPVLDQW 60
M +KL S +N I TR+Y K + LYS+ISPLG SL P LD W
Sbjct: 1 MNTKLISKTLIQNQN------TIITRSYYTNK-ANKATLYSKISPLGSTP-SLEPELDSW 52
Query: 61 VLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLA-FSVHDHAVQLDLIGKVRG 119
V G K+ ELQR+I LR RKRF HALQVSEWM + + FS +HAVQLDLIG+V G
Sbjct: 53 VRSGNKVRVAELQRIIHDLRKRKRFSHALQVSEWMHKKDICIFSPSEHAVQLDLIGRVHG 112
Query: 120 LESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM 179
SAE YFN+L D+DK +K YGALLNCYVR+ D+S+ +QKMKEMG S+L YN IM
Sbjct: 113 FVSAENYFNNLRDQDKNEKTYGALLNCYVRQRETDKSILHLQKMKEMGFAKSSLTYNDIM 172
Query: 180 CLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHI 239
CLYTN GQHEK+P VL +MKEN V PDNFSYR+CINS+GAR +L ME +L EME Q I
Sbjct: 173 CLYTNVGQHEKVPQVLNEMKENNVLPDNFSYRLCINSFGARDDLEGMEKILNEMEHQPDI 232
Query: 240 SMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMM 299
MDW TY+ AN+YII L +KAI LKK E + K KD GYNHLIS YA LGNK E++
Sbjct: 233 VMDWNTYAVAANFYIIGDLTDKAIDTLKKSEARLDK-KDGTGYNHLISLYAKLGNKTEVL 291
Query: 300 KFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGY 359
+ W L+K C++ +N+DYI M+ SL+K+ E EEAEKML+EWE S YD RVPN +++GY
Sbjct: 292 RLWDLEKSACERHINKDYIIMMESLLKLSEFEEAEKMLKEWESSGNFYDVRVPNTLIIGY 351
Query: 360 SQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKF 419
S+KG+ EKA A+L+ + +KGK PNSW I+AAG+ DK+ + KAF CMK AL ++ ENK
Sbjct: 352 SRKGLCEKAKALLENLTEKGKMTLPNSWGIVAAGFFDKSEVAKAFSCMKAALCLYVENKG 411
Query: 420 WRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQ-KRNMYHALTEAHIRSGQEVDGLL 478
W+P +++ IL WLGD E+ EAFVSSLK + R MYHA+ +A+IR+G+EV LL
Sbjct: 412 WKPNQRVINGILSWLGDEGSAEDAEAFVSSLKTVIPVNREMYHAVLKANIRAGKEVHRLL 471
Query: 479 ESMKADDIDEDK 490
+ MK +I ED+
Sbjct: 472 DGMKTYNIKEDE 483
>gi|224125490|ref|XP_002329818.1| predicted protein [Populus trichocarpa]
gi|222870880|gb|EEF08011.1| predicted protein [Populus trichocarpa]
Length = 494
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 265/492 (53%), Positives = 341/492 (69%), Gaps = 11/492 (2%)
Query: 1 MASKLFSTIFNNKRNFTKTNLEIFTRAYRAVKPVARNNLYSRISPLGDPDVSLTPVLDQW 60
M +KL S N +N I +R+Y K + LYS++SPLG SL P LD W
Sbjct: 1 MNTKLISKTLNQNQN------AIISRSYYTNK-TNKATLYSKLSPLGSTP-SLEPELDSW 52
Query: 61 VLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLA-FSVHDHAVQLDLIGKVRG 119
+ G+K+ ELQR+I R RKRF HALQVSEWM+ +G+ FS HAVQLDLIG+V G
Sbjct: 53 IQNGKKVKVAELQRIIHDFRMRKRFTHALQVSEWMNKKGICIFSPSQHAVQLDLIGRVHG 112
Query: 120 LESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM 179
SAE YFN+L D+DK +K YGALLNCYV++ D+S+S +QKMKEMG S+L+YN IM
Sbjct: 113 FVSAENYFNNLRDQDKNEKTYGALLNCYVQKRETDKSISHLQKMKEMGFAKSSLSYNDIM 172
Query: 180 CLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHI 239
CLYTN GQHEK+P VL +MKEN V PDNFSYR+C+NSYGAR +L ME +L EME Q I
Sbjct: 173 CLYTNVGQHEKVPQVLNEMKENNVSPDNFSYRLCMNSYGARGDLEGMEKMLNEMEHQPDI 232
Query: 240 SMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMM 299
+DW +Y+ A+ YI GL +KAI LKK E + K KD GYNHLIS YA+LG K E++
Sbjct: 233 VVDWNSYAVAASSYIKGGLTDKAIDSLKKSETRLDK-KDGTGYNHLISLYATLGEKTEVL 291
Query: 300 KFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGY 359
+ W L+K C++ +N+DYI ++ SLVK+ E EE EK+L+EWE S YD RVPN +++GY
Sbjct: 292 RLWDLEKSTCERPINKDYINIMASLVKLDEFEEVEKVLKEWEASGNFYDVRVPNTLIIGY 351
Query: 360 SQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKF 419
S KG+ EKA A+L+ + +KGK PN W +AAG+ DKN + KAF CMK AL ++EENK
Sbjct: 352 SGKGLYEKAKALLENLTEKGKATLPNIWGKVAAGFFDKNEVAKAFSCMKAALCLYEENKE 411
Query: 420 WRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK-IKVQKRNMYHALTEAHIRSGQEVDGLL 478
W+P +++ IL WLGD E+ EAFVSSLK + R MYHA+ +AHIR+G+EV GLL
Sbjct: 412 WKPNQKVITGILSWLGDEGSAEDAEAFVSSLKNVIPMNREMYHAVLKAHIRAGKEVHGLL 471
Query: 479 ESMKADDIDEDK 490
+ MK I ED+
Sbjct: 472 DGMKTCKIKEDE 483
>gi|357446577|ref|XP_003593564.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482612|gb|AES63815.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 495
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 255/471 (54%), Positives = 336/471 (71%), Gaps = 3/471 (0%)
Query: 19 TNLEIFTRAYRAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQ 78
TN+ R+Y K + +LYS ISPLG+ S+ P LD WV +G K+S ELQR++R
Sbjct: 11 TNIGSRNRSYYTSK-TKKPSLYSVISPLGNQTTSVAPQLDDWVYKGNKVSVGELQRIVRD 69
Query: 79 LRSRKRFKHALQVSEWMSGQGLA-FSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVD 137
LR R RF ALQVSEWM+ G+ FS +HAV LDL G+V G +AETYFNSL D ++ +
Sbjct: 70 LRKRSRFTQALQVSEWMNKIGVCIFSPVEHAVHLDLTGRVHGFYAAETYFNSLKDIERNE 129
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
K +GALLNCYVR+ VD+SLS ++KMKE+G S+L YN IMCLYTN GQHEK+ DV +
Sbjct: 130 KTHGALLNCYVRQRQVDKSLSHLKKMKELGFALSSLTYNNIMCLYTNIGQHEKVSDVFNE 189
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
MKEN V PDNFSYRICI SYG RS++ M +L+EMESQ HI MDW TYS VAN+YI A
Sbjct: 190 MKENHVLPDNFSYRICIGSYGVRSDIDGMNAILKEMESQPHIVMDWNTYSVVANFYIKAE 249
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
L +AI L+KCE + KD GYNHLIS YA LG K+E+++ W ++K CK+ LNRD+
Sbjct: 250 LSSEAIDALRKCEKRLD-DKDGEGYNHLISLYARLGKKNEVLRLWDMEKSACKRCLNRDF 308
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
ITML SLVK+ E +EA+K+L+EWE S CYD+ VPN++++GYS+K EKA+A+L++I K
Sbjct: 309 ITMLESLVKLEEFDEADKILKEWEFSGNCYDYGVPNVVVVGYSEKDFPEKAEAILQDIWK 368
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDN 437
K K +SW ++A Y K MEKA EC+K A+ ++ ENK +P ++SSI W+GDN
Sbjct: 369 KRKYTDTSSWILVADRYLLKGEMEKALECLKTAVCLYPENKKRKPNHRVISSIYSWIGDN 428
Query: 438 RDVEEVEAFVSSLKIKVQKRNMYHALTEAHIRSGQEVDGLLESMKADDIDE 488
VE+ EA V LK + R+MYH+L +A++R+ +EVDG+L+ MK D+IDE
Sbjct: 429 ASVEDAEALVRLLKKFQKNRHMYHSLLKAYVRADKEVDGVLDRMKEDNIDE 479
>gi|297799892|ref|XP_002867830.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313666|gb|EFH44089.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 492
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 241/467 (51%), Positives = 326/467 (69%), Gaps = 6/467 (1%)
Query: 28 YRAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKH 87
Y V + LYS+ISPLGDP S+ P L WV G+K+S EL R++ LR RKRF H
Sbjct: 16 YYYTNRVKKTTLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRKRFLH 75
Query: 88 ALQVSEWMSGQGLA-FSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNC 146
AL+VS+WM+ G+ FS +HAV LDLIG+V G +AE YF +L ++ K +K YGALLNC
Sbjct: 76 ALEVSKWMNETGVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNEKTYGALLNC 135
Query: 147 YVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPD 206
YVR+ V++SL QKMKEMG S+L YN IMCLYTN GQHEK+P VL +MKE V PD
Sbjct: 136 YVRQQNVEKSLLHFQKMKEMGFVSSSLTYNNIMCLYTNIGQHEKVPGVLDEMKEENVAPD 195
Query: 207 NFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYL 266
N+S+RICIN++GA S+L + +L++ME + +MDW TY+ A +YI G ++A+ L
Sbjct: 196 NYSFRICINAFGAMSDLERIGGILRDMERRPDFTMDWNTYAVAAKFYIDGGDCDRAVELL 255
Query: 267 KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVK 326
K E + K KD GYNHLI+ YA LGNK E+++ W L+K CK+++N+DY+T+L SL+K
Sbjct: 256 KMSEYRLEK-KDGEGYNHLITLYARLGNKIEVLRLWELEKEACKRRINQDYLTVLQSLMK 314
Query: 327 IGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNS 386
I L+EAE +L EWE S CYDFRVPN ++ GY+ K M EKA+A+L+++ ++GKT TP S
Sbjct: 315 IDGLKEAEVVLTEWESSGNCYDFRVPNTVIRGYTGKSMEEKAEAMLEDLARRGKTTTPES 374
Query: 387 WSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAF 446
W ++A YA+K + AF+CMK AL + EN+ WRP LV+S+L WLG ++EVE+F
Sbjct: 375 WGLVATAYAEKGALGNAFKCMKTALGIEVENRKWRPGLKLVTSVLSWLGGEGSLKEVESF 434
Query: 447 VSSLK--IKVQKRNMYHALTEAHIR-SGQEVDGLLESMKADDIDEDK 490
V+SL+ I V K+ MYHAL +A IR G +D LL+ MK D I+ D+
Sbjct: 435 VASLRNCIGVNKQ-MYHALVKADIREGGSNIDTLLKRMKDDQIETDE 480
>gi|22328859|ref|NP_680735.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75146702|sp|Q84JR3.1|PP334_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g21705, mitochondrial; Flags: Precursor
gi|28393142|gb|AAO42004.1| unknown protein [Arabidopsis thaliana]
gi|28827500|gb|AAO50594.1| unknown protein [Arabidopsis thaliana]
gi|332659092|gb|AEE84492.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 492
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 240/467 (51%), Positives = 326/467 (69%), Gaps = 6/467 (1%)
Query: 28 YRAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKH 87
Y V + LYS+ISPLGDP S+ P L WV G+K+S EL R++ LR RKRF H
Sbjct: 16 YYYTNRVKKTTLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRKRFLH 75
Query: 88 ALQVSEWMSGQGLA-FSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNC 146
AL+VS+WM+ G+ FS +HAV LDLIG+V G +AE YF +L ++ K DK YGALLNC
Sbjct: 76 ALEVSKWMNETGVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGALLNC 135
Query: 147 YVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPD 206
YVR+ V++SL +KMKEMG S+L YN IMCLYTN GQHEK+P VL +MKE V PD
Sbjct: 136 YVRQQNVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPD 195
Query: 207 NFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYL 266
N+SYRICIN++GA +L + L++ME + I+MDW TY+ A +YI G ++A+ L
Sbjct: 196 NYSYRICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVELL 255
Query: 267 KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVK 326
K E+ + K KD GYNHLI+ YA LG K E+++ W L+K CK+++N+DY+T+L SLVK
Sbjct: 256 KMSENRLEK-KDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLVK 314
Query: 327 IGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNS 386
I L EAE++L EW+ S CYDFRVPN ++ GY K M EKA+A+L+++ ++GK TP S
Sbjct: 315 IDALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTPES 374
Query: 387 WSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAF 446
W ++A YA+K +E AF+CMK AL V ++ WRP +LV+S+L W+GD ++EVE+F
Sbjct: 375 WELVATAYAEKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKEVESF 434
Query: 447 VSSLK--IKVQKRNMYHALTEAHIR-SGQEVDGLLESMKADDIDEDK 490
V+SL+ I V K+ MYHAL +A IR G+ +D LL+ MK D I+ D+
Sbjct: 435 VASLRNCIGVNKQ-MYHALVKADIREGGRNIDTLLQRMKDDKIEIDE 480
>gi|115473169|ref|NP_001060183.1| Os07g0598500 [Oryza sativa Japonica Group]
gi|34393591|dbj|BAC83218.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113611719|dbj|BAF22097.1| Os07g0598500 [Oryza sativa Japonica Group]
gi|215706491|dbj|BAG93347.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/446 (50%), Positives = 308/446 (69%), Gaps = 4/446 (0%)
Query: 32 KPVARNNLYSRISPLGDPDVSLTPVLDQWVLE-GQKISELELQRVIRQLRSRKRFKHALQ 90
KP +L S + PLG P L P +++W + G ++ +EL+R++++LR R+R + AL+
Sbjct: 58 KPARPPSLQSTLWPLGHPGTLLVPEIERWAAKPGNRLRHVELERIVKELRKRRRHRQALE 117
Query: 91 VSEWMSGQG-LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVR 149
VSEWM+ +G + F DHAV LDLIG++ G +AETYFN+L D+DK +K YGALLNCY R
Sbjct: 118 VSEWMNAKGHVKFLPKDHAVHLDLIGEIHGSSAAETYFNNLPDKDKTEKPYGALLNCYTR 177
Query: 150 EGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFS 209
E LV++SL+ QKMKE+G S L YN IM LYTN GQHEK+P V+ +MK NG+ PDNFS
Sbjct: 178 ELLVEKSLAHFQKMKELGFVFSTLPYNNIMGLYTNLGQHEKVPSVIAEMKSNGIVPDNFS 237
Query: 210 YRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC 269
YRICINSYG R++ MEN L+EME + I +DW TY+ VA+ YI ++EKA LKK
Sbjct: 238 YRICINSYGTRADFFGMENTLEEMECEPKIVVDWNTYAVVASNYIKGNIREKAFSALKKA 297
Query: 270 EDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGE 329
E ++ KD+ YNHLIS Y LG+K E+ + W LQ C + +N+DY TML LVK+ E
Sbjct: 298 EAKIN-IKDSDSYNHLISLYGHLGDKSEVNRLWALQMSNCNRHINKDYTTMLAVLVKLNE 356
Query: 330 LEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSI 389
+EEAE +L+EWE S +DF+VPN++L GY QK +++KA+A+L + +KKGK P SW+I
Sbjct: 357 IEEAEVLLKEWESSGNAFDFQVPNVLLTGYRQKDLLDKAEALLDDFLKKGKMPPSTSWAI 416
Query: 390 IAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSS 449
+AAGYA+K + KA+E K AL V+ N W P+P ++ IL +LGD DVEEVE FV
Sbjct: 417 VAAGYAEKGDAAKAYELTKNALCVYAPNTGWIPRPGMIEMILKYLGDEGDVEEVEIFVDL 476
Query: 450 LKIKVQ-KRNMYHALTEAHIRSGQEV 474
LK+ V +M AL+ A +R ++V
Sbjct: 477 LKVAVPLNSDMTDALSRARMREEKKV 502
>gi|357146877|ref|XP_003574143.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Brachypodium distachyon]
Length = 511
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 221/446 (49%), Positives = 308/446 (69%), Gaps = 4/446 (0%)
Query: 33 PVARNNLYSRISPLGDPDVSLTPVLDQWV-LEGQKISELELQRVIRQLRSRKRFKHALQV 91
P +L S + PLG P L P +++W G ++ +EL+R++++LR R+R + AL+V
Sbjct: 53 PARPPSLQSTLWPLGHPSTLLVPEIERWADKPGNRLRPVELERIVKELRKRRRHRQALEV 112
Query: 92 SEWMSGQGLA-FSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVRE 150
SEWMS +GL F DHAV LDLIG+V G+ +AE YFN L D+DK +K YGALLNCY RE
Sbjct: 113 SEWMSAKGLVKFLPKDHAVHLDLIGQVHGVGAAEAYFNKLADKDKTEKPYGALLNCYTRE 172
Query: 151 GLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSY 210
LVD+SL+ QKMKE+G S+L YN +M LYTN GQHEK+P V+ +MK NG+ PDNFSY
Sbjct: 173 LLVDKSLAHFQKMKELGFVFSSLPYNNLMGLYTNLGQHEKVPSVIAEMKSNGIVPDNFSY 232
Query: 211 RICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCE 270
RICINSYGAR++ MEN L+EME + I +DW TY+ +AN YI L++KAI L+K E
Sbjct: 233 RICINSYGARADFFGMENTLEEMECEPQIVVDWNTYAVLANNYIKGNLRDKAISALQKAE 292
Query: 271 DIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGEL 330
+ KD+ YNHL+S Y LG+K E+ + W LQ CK+ +N+DY TML L+K+ E+
Sbjct: 293 AKID-IKDSDTYNHLMSLYGQLGDKSEVKRLWALQMSNCKRHINKDYTTMLAMLLKLDEI 351
Query: 331 EEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSII 390
EEAE +L+EWE S +DF VPN++L GY QK +++KA+A+L + +KKGK PT SW+I+
Sbjct: 352 EEAEALLKEWESSENAFDFHVPNVLLTGYRQKDLLDKAEALLDDFLKKGKMPTSTSWAIV 411
Query: 391 AAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL 450
A GYA+K ++ KA+E K AL V+ N W P+P+++ IL +LGD ++++VE FV L
Sbjct: 412 AIGYAEKGDVAKAYELTKNALCVYAPNSGWIPRPAMIEMILKYLGDECNLKDVETFVHLL 471
Query: 451 KIKVQ-KRNMYHALTEAHIRSGQEVD 475
+ V +M AL A +R ++V+
Sbjct: 472 QAAVPMNSDMTDALARARMREEKKVE 497
>gi|326530906|dbj|BAK01251.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 511
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/462 (48%), Positives = 311/462 (67%), Gaps = 9/462 (1%)
Query: 30 AVKPVARN-NLYSRISPLGDPDVSLTPVLDQWV-LEGQKISELELQRVIRQLRSRKRFKH 87
A +P R L S + PLG PD L P +++W G ++ +EL+R++++LR R+R +
Sbjct: 49 AERPPRRPPGLQSTLWPLGHPDTLLVPEIERWADKPGNRLRPVELERIVKELRKRRRHRQ 108
Query: 88 ALQVSEWMSGQG-LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNC 146
AL+VSEWMS +G + F D+AV LDLIG+V G+ +AE YFN+L D+DK +K YGALLNC
Sbjct: 109 ALEVSEWMSAKGHVRFLPKDYAVHLDLIGQVHGIGAAEAYFNTLPDKDKTEKPYGALLNC 168
Query: 147 YVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPD 206
Y RE +VD SL+ QKMKE+G S+L YN +M LYTN GQHEK+P V+ +MK +G+ PD
Sbjct: 169 YTRELMVDGSLAHFQKMKELGFVFSSLPYNNLMGLYTNIGQHEKVPSVIAEMKGSGIMPD 228
Query: 207 NFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYL 266
NFSYRICINSYG R++ MEN L++ME + I +DW TY+ VA+ YI L+EKAI L
Sbjct: 229 NFSYRICINSYGTRADFFGMENTLEDMECEPQIVVDWNTYAVVASNYIKGNLREKAISAL 288
Query: 267 KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVK 326
KK E + KD+ YNHLIS Y LG+K EM + WGLQ CK+ +N+DY TML LV+
Sbjct: 289 KKAEAKID-IKDSDTYNHLISLYGQLGDKSEMRRLWGLQMSNCKRHINKDYTTMLAMLVR 347
Query: 327 IGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNS 386
+ E+EEAE +L+EWE S +DF VPN++L GY K M++KA+A+L + +KKGK P S
Sbjct: 348 LDEIEEAEALLKEWESSENAFDFHVPNVLLTGYRHKDMLDKAEALLDDFLKKGKMPPSTS 407
Query: 387 WSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAF 446
W+I+A GYA+K + KA+E +K AL V+ W P+P+++ IL +LGD D+++VE F
Sbjct: 408 WAIVAIGYAEKGDCAKAYELIKNALCVYVPRSGWIPRPAMIEMILKYLGDEGDLKDVETF 467
Query: 447 VSSLKIKVQ-KRNMYHALTEAHIR----SGQEVDGLLESMKA 483
V L+ + +M AL+ A +R SG L S KA
Sbjct: 468 VQLLQAAMPMNSHMTDALSRARMREEKKSGDAEKEALSSTKA 509
>gi|242034057|ref|XP_002464423.1| hypothetical protein SORBIDRAFT_01g017970 [Sorghum bicolor]
gi|241918277|gb|EER91421.1| hypothetical protein SORBIDRAFT_01g017970 [Sorghum bicolor]
Length = 496
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 224/470 (47%), Positives = 316/470 (67%), Gaps = 13/470 (2%)
Query: 29 RAVKPVARNN---------LYSRISPLGDPDVSLTPVLDQWVLEGQ-KISELELQRVIRQ 78
RAV +R+N L S + PLG P L P ++ W + ++ +ELQR++R+
Sbjct: 27 RAVATSSRSNSEEERPPQSLQSTLWPLGHPCTLLVPEIELWAARPRNRLRAVELQRIVRE 86
Query: 79 LRSRKRFKHALQVSEWMSGQG-LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVD 137
LR R R + AL+VSEWM+ +G + F DHA+ LDLIG+V G+ +AETYFN+L+D+DK +
Sbjct: 87 LRKRHRHRQALEVSEWMNLKGHVKFLPKDHAIHLDLIGQVHGVGAAETYFNNLSDKDKTE 146
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
K YGALLNCY RE LVD++L+ Q MKE+G SAL+YN +M LYTN GQHE++P V+ +
Sbjct: 147 KPYGALLNCYTRELLVDKALAHFQNMKELGFVFSALSYNNLMGLYTNIGQHERVPMVMAE 206
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
MK +G+ PDNFSYRICINSYG R++ +EN L+EME + I +DW TY+ VA+ YI
Sbjct: 207 MKRDGIVPDNFSYRICINSYGIRADFFGLENTLEEMECEPQIVVDWNTYAVVASNYIKGY 266
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
L+EKA L+K E + K KD Y HLIS Y LG+K E+ + W L + CK+ +N+DY
Sbjct: 267 LREKAYSALRKAEAKMDK-KDGDAYGHLISLYGHLGDKLEVKRLWALHMLNCKRYINKDY 325
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
ML LVK+ E+ EAE +L+EWE S +DF+VPN++L GY QKG+++KA+ +L +K
Sbjct: 326 TNMLAVLVKLDEITEAEDLLKEWESSKNAFDFQVPNVLLTGYRQKGLLDKAETLLDGFLK 385
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDN 437
KGKTPT SW I+A GYA+K ++ KA+E K AL+V N W P+PS++ IL +LG+
Sbjct: 386 KGKTPTSTSWWIVAIGYAEKGDVAKAYELTKNALSVFAPNSGWIPRPSIIEMILKYLGNE 445
Query: 438 RDVEEVEAFVSSLKIKV-QKRNMYHALTEAHIRSGQEVDGLLESMKADDI 486
+V++VEAFV+ LK+ V +M AL+ A R ++ + E+ + D I
Sbjct: 446 GEVKDVEAFVNLLKVAVPMNSDMTEALSRARAREERKAEEATEAPREDII 495
>gi|293331503|ref|NP_001168643.1| uncharacterized protein LOC100382430 [Zea mays]
gi|223949857|gb|ACN29012.1| unknown [Zea mays]
gi|413933913|gb|AFW68464.1| hypothetical protein ZEAMMB73_255812 [Zea mays]
Length = 500
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/425 (50%), Positives = 295/425 (69%), Gaps = 4/425 (0%)
Query: 33 PVARN-NLYSRISPLGDPDVSLTPVLDQWVLEGQKI-SELELQRVIRQLRSRKRFKHALQ 90
P AR+ +L S + PLG P L P ++ W + + +ELQR++++LR R+R + AL+
Sbjct: 41 PPARSLSLDSTLFPLGHPSTLLVPEIELWAARPRNLLRAVELQRIVKELRKRRRHRQALE 100
Query: 91 VSEWMSGQG-LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVR 149
VSEWMS +G + F DHA+ LDLIG++ G+E+AETYFN+L+D+DK +K YGALLNCY R
Sbjct: 101 VSEWMSLKGHVKFLPKDHAIHLDLIGQIHGVEAAETYFNNLSDKDKTEKPYGALLNCYTR 160
Query: 150 EGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFS 209
E LVD++L+ + MKE+G S L YN +M LYT GQHE++P V+ +MK NG+ PDNFS
Sbjct: 161 ELLVDKALAHFRNMKELGFVFSTLPYNDLMGLYTRIGQHERVPSVMAEMKSNGIVPDNFS 220
Query: 210 YRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC 269
YRICINSYG R++ +EN L+EME + I +DW TY+ VA+ YI L+EKA L K
Sbjct: 221 YRICINSYGTRADFFGLENTLEEMECEPQIVVDWNTYAVVASNYIKGDLREKAYSALSKA 280
Query: 270 EDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGE 329
E + K +D Y HLIS Y +LG+K E + W +Q CK+ +NRDY+ ML LVK+ E
Sbjct: 281 EAKLDK-QDPDAYRHLISLYGNLGDKSEAKRLWAVQMSNCKRYINRDYMNMLSVLVKLDE 339
Query: 330 LEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSI 389
+ EAE +L+EWE S +DFRVPN++L GY QK +++KA+ +L +KKGKTP SW I
Sbjct: 340 ITEAEDLLKEWESSQNSFDFRVPNVLLTGYRQKALLDKAEMLLDGFLKKGKTPPSTSWGI 399
Query: 390 IAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSS 449
+A GYA+K ++ KA+E K AL+VH N W P+PS++ IL +LGD +V++VEAFVS
Sbjct: 400 VAIGYAEKGDVAKAYEMTKNALSVHAPNTGWIPRPSMLEMILKYLGDEGEVKDVEAFVSL 459
Query: 450 LKIKV 454
LK V
Sbjct: 460 LKAAV 464
>gi|242096946|ref|XP_002438963.1| hypothetical protein SORBIDRAFT_10g029040 [Sorghum bicolor]
gi|241917186|gb|EER90330.1| hypothetical protein SORBIDRAFT_10g029040 [Sorghum bicolor]
Length = 502
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 212/460 (46%), Positives = 308/460 (66%), Gaps = 4/460 (0%)
Query: 30 AVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQK-ISELELQRVIRQLRSRKRFKHA 88
P L S + PLG+P L P ++ W + + +++L+R++++LR+R+R + A
Sbjct: 43 GTPPARPPTLGSTLWPLGNPGTLLVPEIELWAARPENHLRDVDLRRIVKELRTRRRHRQA 102
Query: 89 LQVSEWMSGQG-LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCY 147
L+VSEWM+ +G + F DHAV LDLIG + G+ +AETYFN+L+D+DK +K YGALLNCY
Sbjct: 103 LEVSEWMNLKGHVKFLPKDHAVHLDLIGHIHGVGAAETYFNNLSDKDKTEKPYGALLNCY 162
Query: 148 VREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDN 207
RE LVD++L+ QKMKE+G +AL YN +M LYTN QHE++P V+ +MK NG+ PDN
Sbjct: 163 TRERLVDKALAHFQKMKELGFVFTALPYNNLMSLYTNIEQHERVPSVMAEMKSNGIVPDN 222
Query: 208 FSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLK 267
FSYRICINSYG R++ +EN L+EME + I +DW TY+ VA+ YI L+EKA LK
Sbjct: 223 FSYRICINSYGTRADFFGLENTLEEMECEPQIVVDWNTYTVVASQYIKGDLREKAYSALK 282
Query: 268 KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKI 327
K E + KD Y HLIS Y LG+K E+ + W +Q C++ LN DY +L LVK+
Sbjct: 283 KAEAKMG-IKDLAAYRHLISLYGHLGDKSEVKRLWAVQMSNCQRHLNTDYTNILAVLVKL 341
Query: 328 GELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSW 387
E+ EAE +L+EWE S +DF+VPN++L Y QKG+++KA+A+L + KGK P SW
Sbjct: 342 DEIAEAEDLLKEWETSKNEFDFKVPNVLLTWYCQKGLLDKAEALLDGFLIKGKMPPSTSW 401
Query: 388 SIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFV 447
I+A+GY +K ++ +A+E K AL ++ N W P+PS++ IL +LGD R+V++VEAF+
Sbjct: 402 EIVASGYTEKGDVARAYELTKNALYMYAPNSGWVPEPSMIEMILKYLGDEREVKDVEAFI 461
Query: 448 SSLKIKVQ-KRNMYHALTEAHIRSGQEVDGLLESMKADDI 486
LK+ V +M AL+ A R ++ +G E+++ D I
Sbjct: 462 DLLKVAVPMNSDMTEALSRARSREEKKGEGAREALREDLI 501
>gi|222637397|gb|EEE67529.1| hypothetical protein OsJ_24995 [Oryza sativa Japonica Group]
Length = 491
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/446 (49%), Positives = 296/446 (66%), Gaps = 19/446 (4%)
Query: 32 KPVARNNLYSRISPLGDPDVSLTPVLDQWVLE-GQKISELELQRVIRQLRSRKRFKHALQ 90
KP +L S + PLG P L P +++W + G ++ +EL+R+
Sbjct: 58 KPARPPSLQSTLWPLGHPGTLLVPEIERWAAKPGNRLRHVELERI--------------- 102
Query: 91 VSEWMSGQG-LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVR 149
VSEWM+ +G + F DHAV LDLIG++ G +AETYFN+L D+DK +K YGALLNCY R
Sbjct: 103 VSEWMNAKGHVKFLPKDHAVHLDLIGEIHGSSAAETYFNNLPDKDKTEKPYGALLNCYTR 162
Query: 150 EGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFS 209
E LV++SL+ QKMKE+G S L YN IM LYTN GQHEK+P V+ +MK NG+ PDNFS
Sbjct: 163 ELLVEKSLAHFQKMKELGFVFSTLPYNNIMGLYTNLGQHEKVPSVIAEMKSNGIVPDNFS 222
Query: 210 YRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC 269
YRICINSYG R++ MEN L+EME + I +DW TY+ VA+ YI ++EKA LKK
Sbjct: 223 YRICINSYGTRADFFGMENTLEEMECEPKIVVDWNTYAVVASNYIKGNIREKAFSALKKA 282
Query: 270 EDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGE 329
E ++ KD+ YNHLIS Y LG+K E+ + W LQ C + +N+DY TML LVK+ E
Sbjct: 283 EAKIN-IKDSDSYNHLISLYGHLGDKSEVNRLWALQMSNCNRHINKDYTTMLAVLVKLNE 341
Query: 330 LEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSI 389
+EEAE +L+EWE S +DF+VPN++L GY QK +++KA+A+L + +KKGK P SW+I
Sbjct: 342 IEEAEVLLKEWESSGNAFDFQVPNVLLTGYRQKDLLDKAEALLDDFLKKGKMPPSTSWAI 401
Query: 390 IAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSS 449
+AAGYA+K + KA+E K AL V+ N W P+P ++ IL +LGD DVEEVE FV
Sbjct: 402 VAAGYAEKGDAAKAYELTKNALCVYAPNTGWIPRPGMIEMILKYLGDEGDVEEVEIFVDL 461
Query: 450 LKIKVQ-KRNMYHALTEAHIRSGQEV 474
LK+ V +M AL+ A +R ++V
Sbjct: 462 LKVAVPLNSDMTDALSRARMREEKKV 487
>gi|242096944|ref|XP_002438962.1| hypothetical protein SORBIDRAFT_10g029030 [Sorghum bicolor]
gi|241917185|gb|EER90329.1| hypothetical protein SORBIDRAFT_10g029030 [Sorghum bicolor]
Length = 503
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/447 (45%), Positives = 299/447 (66%), Gaps = 4/447 (0%)
Query: 26 RAYRAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLE-GQKISELELQRVIRQLRSRKR 84
RA P L+S + PLG P L P ++ W G+++ EL V++ LR R R
Sbjct: 39 RAEEGTPPARPPTLWSTLCPLGKPGTLLVPEIELWAARSGKRLRPCELHFVVKDLRRRHR 98
Query: 85 FKHALQVSEWMSGQG-LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGAL 143
+ AL+VSEWM+ +G + F DHAV LDLIG + G+ +AETYFN+L+D+DK +K YGAL
Sbjct: 99 HRQALEVSEWMNLKGHVKFLPKDHAVHLDLIGHIHGVGAAETYFNNLSDKDKTEKPYGAL 158
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
L CY RE LVD++L+ QKMKE+G + L Y+ +M LY N QHE++P V+ +MK NG+
Sbjct: 159 LYCYTRECLVDKALAHFQKMKELGFVFTPLPYSNLMILYANVEQHERVPSVMAEMKSNGI 218
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAI 263
P+NFSY ICIN+YG R++ S +EN L+EME S + +DW TY+ VA++YI L+EKA
Sbjct: 219 VPNNFSYNICINAYGTRADFSGLENTLEEMEFASQVVVDWRTYADVASHYIKGDLREKAY 278
Query: 264 IYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGS 323
L+K E + + KD+ Y+HLIS Y LG+K E+ + W LQ +KCK +N+ Y ML
Sbjct: 279 SALQKAEAKMDE-KDSFAYSHLISLYGHLGDKSEIKRLWVLQMLKCKGCINKGYKYMLTV 337
Query: 324 LVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPT 383
LVK+ E+ EAE +L++WE S +DF+VPNI+L GY Q G+++KA+A+L ++KGK P+
Sbjct: 338 LVKLDEIAEAEDLLKKWESSKNEFDFKVPNILLKGYCQWGLLDKAEALLDGFLRKGKKPS 397
Query: 384 PNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEV 443
SW+I+A+ YA+K ++ +A+E K AL++ + W P+PS++ IL +LGD +V++V
Sbjct: 398 ATSWAIVASAYAEKGDVPRAYELTKRALSMCVPDSGWIPEPSMIEVILKYLGDEGEVKDV 457
Query: 444 EAFVSSLKIKVQ-KRNMYHALTEAHIR 469
EAF+ LK+ V +M AL+ A R
Sbjct: 458 EAFIDLLKVVVPMNSDMTEALSRARSR 484
>gi|125559056|gb|EAZ04592.1| hypothetical protein OsI_26742 [Oryza sativa Indica Group]
Length = 402
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/382 (52%), Positives = 266/382 (69%), Gaps = 3/382 (0%)
Query: 95 MSGQG-LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLV 153
M+ +G + F DHAV LDLIG++ G +AETYFN+L D+DK +K YGALLNCY RE LV
Sbjct: 1 MNAKGHVKFLPKDHAVHLDLIGEIHGSSAAETYFNNLPDKDKTEKPYGALLNCYTRELLV 60
Query: 154 DESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRIC 213
++SL+ QKMKE+G S L YN IM LYTN GQHEK+P V+ +MK NG+ PDNFSYRIC
Sbjct: 61 EKSLAHFQKMKELGFVFSTLPYNNIMGLYTNLGQHEKVPSVIAEMKSNGIVPDNFSYRIC 120
Query: 214 INSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIV 273
INSYG R++ MEN L+EME + I +DW TY+ VA+ YI ++EKA LKK E +
Sbjct: 121 INSYGTRADFFGMENTLEEMECEPKIVVDWNTYAVVASNYIKGNIREKAFSALKKAEAKI 180
Query: 274 SKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEA 333
+ KD+ YNHLIS Y LG+K E+ + W LQ C + +N+DY TML LVK+ E+EEA
Sbjct: 181 N-IKDSDSYNHLISLYGHLGDKSEVNRLWALQMSNCNRHINKDYTTMLAVLVKLNEIEEA 239
Query: 334 EKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAG 393
E +L+EWE S +DF+VPN++L GY QK +++KA+A+L + +KKGK P SW+I+AAG
Sbjct: 240 EVLLKEWESSGNAFDFQVPNVLLTGYRQKDLLDKAEALLDDFLKKGKMPPSTSWAIVAAG 299
Query: 394 YADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK 453
YA+K + KA+E K AL V+ N W P+P ++ IL +LGD DVEEVE FV LK+
Sbjct: 300 YAEKGDAAKAYELTKNALCVYAPNTGWIPRPGMIEMILKYLGDEGDVEEVEIFVDLLKVA 359
Query: 454 VQ-KRNMYHALTEAHIRSGQEV 474
V +M AL+ A +R ++V
Sbjct: 360 VPLNSDMTDALSRARMREEKKV 381
>gi|223949005|gb|ACN28586.1| unknown [Zea mays]
Length = 396
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 188/361 (52%), Positives = 254/361 (70%), Gaps = 2/361 (0%)
Query: 95 MSGQG-LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLV 153
MS +G + F DHA+ LDLIG++ G+E+AETYFN+L+D+DK +K YGALLNCY RE LV
Sbjct: 1 MSLKGHVKFLPKDHAIHLDLIGQIHGVEAAETYFNNLSDKDKTEKPYGALLNCYTRELLV 60
Query: 154 DESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRIC 213
D++L+ + MKE+G S L YN +M LYT GQHE++P V+ +MK NG+ PDNFSYRIC
Sbjct: 61 DKALAHFRNMKELGFVFSTLPYNDLMGLYTRIGQHERVPSVMAEMKSNGIVPDNFSYRIC 120
Query: 214 INSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIV 273
INSYG R++ +EN L+EME + I +DW TY+ VA+ YI L+EKA L K E +
Sbjct: 121 INSYGTRADFFGLENTLEEMECEPQIVVDWNTYAVVASNYIKGDLREKAYSALSKAEAKL 180
Query: 274 SKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEA 333
K +D Y HLIS Y +LG+K E + W +Q CK+ +NRDY+ ML LVK+ E+ EA
Sbjct: 181 DK-QDPDAYRHLISLYGNLGDKSEAKRLWAVQMSNCKRYINRDYMNMLSVLVKLDEITEA 239
Query: 334 EKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAG 393
E +L+EWE S +DFRVPN++L GY QK +++KA+ +L +KKGKTP SW I+A G
Sbjct: 240 EDLLKEWESSQNSFDFRVPNVLLTGYRQKALLDKAEMLLDGFLKKGKTPPSTSWGIVAIG 299
Query: 394 YADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK 453
YA+K ++ KA+E K AL+VH N W P+PS++ IL +LGD +V++VEAFVS LK
Sbjct: 300 YAEKGDVAKAYEMTKNALSVHAPNTGWIPRPSMLEMILKYLGDEGEVKDVEAFVSLLKAA 359
Query: 454 V 454
V
Sbjct: 360 V 360
>gi|449479000|ref|XP_004155477.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 493
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 160/419 (38%), Positives = 267/419 (63%), Gaps = 4/419 (0%)
Query: 33 PVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVS 92
P + L+ R+ GDP S+ VLDQWV EG+++ + +LQ +I+QLR RF ALQ+
Sbjct: 32 PSTEDTLFRRVYRAGDPRTSIVRVLDQWVEEGRQVKQSDLQTLIKQLRKFGRFNQALQLC 91
Query: 93 EWMSGQ-GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREG 151
EW+ + S D AV+L LI K RGLE AE YF+S+ + + K+YGALL+CYV
Sbjct: 92 EWVRNERNQCLSTGDIAVELHLISKARGLEQAEKYFSSIGESSRDHKVYGALLHCYVENK 151
Query: 152 LVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYR 211
+ ++ ++MQKM+E+G + L+YN ++ LY + G+HEK+ ++L +M+E G+ PD F+Y
Sbjct: 152 NLKKAEAIMQKMREVGFMKTPLSYNAMLNLYAHLGKHEKLAELLKEMEEMGIGPDRFTYN 211
Query: 212 ICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCED 271
I +N+Y A S++++ME +L +ME+ ++ DW TY V N Y AGL E +I+ LKK E
Sbjct: 212 IRMNAYAAASDITNMEKLLSKMEADPLVATDWHTYFVVGNGYFKAGLSENSILMLKKAEQ 271
Query: 272 IVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELE 331
+ + L Y +L++ YA++GNKDE+ + W L +K+ N Y+ ++ SL+K+ +++
Sbjct: 272 FIGDKQKWLAYQYLMTLYAAIGNKDEVYRVWNLY-TNLRKRFNSGYLCIISSLMKLDDID 330
Query: 332 EAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIA 391
AE++L+EWE +DFR+PN+++ Y KG ++KA+A + +++ GK P N+W ++A
Sbjct: 331 GAERILKEWESGDTSFDFRIPNMMINSYCMKGFVDKAEAYINRLIETGKEPEANTWDLLA 390
Query: 392 AGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL 450
+GY K E +K+A++V + W+PK ++++ L++L N +V+ E + L
Sbjct: 391 SGYHSNGLTNKVAETLKKAISVSPPH--WKPKYHILAACLEYLKTNENVDLAEEIIGLL 447
>gi|225446335|ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial [Vitis vinifera]
Length = 499
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 167/417 (40%), Positives = 266/417 (63%), Gaps = 5/417 (1%)
Query: 36 RNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWM 95
+ +L SRISP D VS+ P L+QW EG+ I + +L R+IR+LR+ KR+ HAL++ EW+
Sbjct: 34 KESLQSRISPAIDLRVSIVPALEQWRKEGRSIKQQDLHRLIRKLRTFKRYNHALEIYEWI 93
Query: 96 SGQG-LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVD 154
+ S D A+QLDLI KV GLE AE YFN + + ++YGALLNCY ++ ++
Sbjct: 94 RDKFYFDISPGDVAIQLDLISKVHGLEQAEKYFNETPNSLRSFQVYGALLNCYSQKKSLE 153
Query: 155 ESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICI 214
++ ++MQ+M++MG F L+YN ++ LY+ G+HEK+ +++ +M+ENG+ D+F+Y I +
Sbjct: 154 KAEAIMQEMRDMG-FVKTLSYNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSFTYCIRL 212
Query: 215 NSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVS 274
N+Y A S++ ME +L ++E+ ++ DW Y AN Y+ A LKEKA+ LKK E +S
Sbjct: 213 NAYCATSDMEGMEKLLMKLETDPAVNSDWNAYIVAANGYLKADLKEKAVEMLKKSEQFIS 272
Query: 275 KSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
GY L++ YA++GNK E+ + W L K K N Y+ M+ SL+K+ +++ AE
Sbjct: 273 GRSRRFGYEILLTLYATMGNKTEVYRIWNLYKT-IGKFFNTGYVAMVSSLLKLDDMDGAE 331
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGY 394
K EEW +DFRVPN+++ Y +KG++EKA+ ++ +++G+ P +W +AAGY
Sbjct: 332 KTFEEWLSGNKFFDFRVPNLLIRAYCKKGLLEKAEQLVSRAIEQGEEPIAVTWDALAAGY 391
Query: 395 ADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK 451
+ N MEKA + +K+AL + W+P P +S+ L++L DVEE E + L+
Sbjct: 392 HENNQMEKAVDTLKKALLATSQG--WKPNPVTLSACLEYLKGKGDVEEAENLIRLLR 446
>gi|147775992|emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]
Length = 499
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 167/417 (40%), Positives = 265/417 (63%), Gaps = 5/417 (1%)
Query: 36 RNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWM 95
+ +L SRISP D VS+ P L+QW EG+ I + +L R+IR+LR+ KR+ HAL++ EW+
Sbjct: 34 KESLQSRISPAIDLRVSIVPALEQWRKEGRSIKQQDLHRLIRKLRTFKRYNHALEIYEWI 93
Query: 96 SGQG-LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVD 154
+ S D A+QLDLI KV GLE AE YFN + + ++YGALLNCY ++ ++
Sbjct: 94 RDKFYFDISPGDVAIQLDLISKVHGLEQAEKYFNETPNSLRSFQVYGALLNCYSQKKSLE 153
Query: 155 ESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICI 214
++ ++MQ+M++MG F L+YN ++ LY+ G+HEK+ +++ +M+ENG+ D+F+Y I +
Sbjct: 154 KAEAIMQEMRDMG-FVKTLSYNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSFTYCIRL 212
Query: 215 NSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVS 274
N+Y A S++ ME +L ++E+ ++ DW Y AN Y+ A LKEKA+ LKK E +S
Sbjct: 213 NAYCATSDMEGMEKLLMKLETDPAVNSDWNAYIVAANGYLKADLKEKAVEMLKKSEQFIS 272
Query: 275 KSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
GY L++ YA++GNK E + W L K K N Y+ M+ SL+K+ +++ AE
Sbjct: 273 GRSRRFGYEILLTLYATMGNKTEXYRIWNLYKT-IGKFFNTGYVAMVSSLLKLDDMDGAE 331
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGY 394
K EEW +DFRVPN+++ Y +KG++EKA+ ++ +++G+ P +W +AAGY
Sbjct: 332 KTFEEWLSGNKFFDFRVPNLLIRAYCKKGLLEKAEQLVSRAIEQGEEPIAVTWDALAAGY 391
Query: 395 ADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK 451
+ N MEKA + +K+AL + W+P P +S+ L++L DVEE E + L+
Sbjct: 392 HENNQMEKAVDTLKKALLATSQG--WKPNPVTLSACLEYLKGKXDVEEAENLIRLLR 446
>gi|449438486|ref|XP_004137019.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
gi|449479168|ref|XP_004155524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 500
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 171/455 (37%), Positives = 277/455 (60%), Gaps = 7/455 (1%)
Query: 39 LYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQ 98
L +I + P +S+ PVL++WV +G+ I + ELQ ++ ++ +RF HAL++S+WM+ +
Sbjct: 38 LRQKIVNIRAPKISVVPVLEKWVGDGRAIGKPELQYLVHLMKDSRRFNHALEISQWMTDR 97
Query: 99 G-LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESL 157
L+ S D AV+LDLI V GLE AE YFNS++ K +YGALL CYVRE ++++
Sbjct: 98 RYLSLSPSDAAVRLDLIHSVHGLEHAENYFNSISIRLKTSNVYGALLGCYVREKSLEKAE 157
Query: 158 SLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSY 217
++MQ+M++MG ++ YN ++ LY GQH+KI ++ +MK G+P D +S R +Y
Sbjct: 158 AIMQEMRKMGIATTSFAYNVLINLYAQIGQHDKIDLLIEEMKTKGIPQDIYSIRNLCAAY 217
Query: 218 GARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSK 277
A++++S ME +L+ +E S + DW YS AN Y+ AGL+ +A+ LKK E+ V +
Sbjct: 218 VAKADISGMEKILKRIEEDSELKADWTIYSIAANGYLTAGLETEALSMLKKTEEKVRPNT 277
Query: 278 DALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKML 337
+ + L+S Y G+K+E+ + W K K+ Y M+ SL K+ ++E AE++
Sbjct: 278 NKFAFKFLLSLYERTGHKNEVYRVWNTFK-PLTKETCVPYALMITSLAKLDDIEGAERIF 336
Query: 338 EEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADK 397
+EWE C YDFRV N +L+ Y +KG+++KA++V+ + V + +TP ++WSI+A GYA+
Sbjct: 337 QEWESKCTVYDFRVLNRLLVAYCRKGLLDKAESVVNQAVVE-RTPFRSTWSILATGYAEY 395
Query: 398 NNMEKAFECMKEALAVHEENKFWRPKPS-LVSSILDWLGDNRDVEEVEAFVSSLKIK-VQ 455
+M KA E +K+A+ V +N W+PK ++ + LD+L D E ++ V K
Sbjct: 396 GHMSKAVEMLKKAILVGRQN--WKPKQGDILEACLDYLEKQGDAETMDEIVRLCKSSGTV 453
Query: 456 KRNMYHALTEAHIRSGQEVDGLLESMKADDIDEDK 490
+ MY+ L I G+ V +LE MK D D+
Sbjct: 454 MKEMYYRLLRTSIAGGKPVISILEQMKMDGFAADE 488
>gi|449438086|ref|XP_004136821.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 486
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 155/419 (36%), Positives = 264/419 (63%), Gaps = 4/419 (0%)
Query: 33 PVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVS 92
P + L+ R+ GDP S+ VLDQWV EG+++++ +LQ++I+QLR+ RF HALQ+
Sbjct: 32 PSTEDTLFRRVYRAGDPRTSIVRVLDQWVEEGRQVNQSDLQKLIKQLRTFGRFNHALQLC 91
Query: 93 EWMSGQGLAFSVHDH-AVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREG 151
EW + H A+QL LI K RGLE AE YF+S+ + + K+YGALL+CYV
Sbjct: 92 EWERNERNKCPSPGHIAIQLHLISKARGLEQAEEYFSSIGESSRDHKVYGALLHCYVENK 151
Query: 152 LVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYR 211
+ ++ ++MQKM+E+G + L+YN ++ LY G+HEK+ +++ +M+E G+ + F+Y
Sbjct: 152 NLKKAEAIMQKMREVGFMKTPLSYNAMLNLYAQLGKHEKLDELVKEMEEMGIGHNRFTYN 211
Query: 212 ICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCED 271
+ +N+Y A S++++ME +L +ME+ ++ DW Y TV N Y AGL E +I LKK E
Sbjct: 212 VRMNAYAAASDITNMEKLLSKMEADPLVATDWHIYFTVGNGYFKAGLSENSISMLKKAEQ 271
Query: 272 IVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELE 331
++ + L Y +L++ YA++GNKDE+ + W L +K+ N Y+ ++ SL+K+ +++
Sbjct: 272 LIGDKQKWLAYQYLMTLYAAIGNKDEVYRVWNLY-TNLQKRFNSGYLCIISSLMKLDDID 330
Query: 332 EAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIA 391
AE++L+EWE +DF++PN+++ Y KG ++KA+A + +++ GK P +W +A
Sbjct: 331 GAERILKEWESGDTSFDFKIPNMMINSYCTKGFVDKAEAYISRLIENGKEPRAYAWDRLA 390
Query: 392 AGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL 450
+GY KA E +K+A++V W+P ++++ L++L N +VE E + L
Sbjct: 391 SGYHSNGLTNKAAETLKKAISVSPPR--WKPNYDILAACLEYLKTNGNVELAEEIIGLL 447
>gi|296086986|emb|CBI33242.3| unnamed protein product [Vitis vinifera]
Length = 335
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 162/310 (52%), Positives = 203/310 (65%), Gaps = 42/310 (13%)
Query: 1 MASKLFSTIFNNKRNFTKTNLE---IFTRAYRAVKPVARNNLYSRISPLGDPDVSLTPVL 57
M S+LFS + + + + ++ + I R Y + + +LY++ISPLGDP+ S+ P L
Sbjct: 1 MDSRLFSLLRQSIQQYPQSLIRKNPISNRTYYTSR-YGKISLYNKISPLGDPNTSVVPEL 59
Query: 58 DQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGK 116
D WV G K+ ELQR+I LR RKRF AL++SEWMS +G+ AFS +HAVQLDLIG+
Sbjct: 60 DNWVQNGNKVWVAELQRIIHDLRKRKRFSQALEISEWMSKKGICAFSPTEHAVQLDLIGR 119
Query: 117 VRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYN 176
VRG SAE+YFNSL + DK DK YGALLNCYVR+ D+SLS +QKMKEMG S L YN
Sbjct: 120 VRGFLSAESYFNSLQNHDKTDKTYGALLNCYVRQRQTDKSLSHLQKMKEMGFASSPLTYN 179
Query: 177 GIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQ 236
IMCLYTN GQHEK+PDVL +MK++ V PDNFSYRICINSYGA+S++ MENVL+EME Q
Sbjct: 180 DIMCLYTNVGQHEKVPDVLTEMKQSNVYPDNFSYRICINSYGAQSDIQGMENVLKEMERQ 239
Query: 237 SHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKD 296
HI +D LGYNHLIS YASLGNK
Sbjct: 240 PHI-------------------------------------RDGLGYNHLISLYASLGNKA 262
Query: 297 EMMKFWGLQK 306
E+++ W L+K
Sbjct: 263 EVLRLWSLEK 272
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 31/215 (14%)
Query: 287 SHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYC 346
S++ SL N D+ K +G +L V+ + +++ L++ + +
Sbjct: 128 SYFNSLQNHDKTDKTYG---------------ALLNCYVRQRQTDKSLSHLQKMKEMGFA 172
Query: 347 YDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGY---ADKNNMEKA 403
N I+ Y+ G EK VL E+ + P S+ I Y +D ME
Sbjct: 173 SSPLTYNDIMCLYTNVGQHEKVPDVLTEMKQSNVYPDNFSYRICINSYGAQSDIQGMENV 232
Query: 404 FECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDV-------EEVEAFVSSLKIKV-Q 455
+ M+ + + + + + S+ LG+ +V + VEAFV SL+I +
Sbjct: 233 LKEMERQPHIRDGLGY-----NHLISLYASLGNKAEVLRLWSLEKNVEAFVGSLRIVIPM 287
Query: 456 KRNMYHALTEAHIRSGQEVDGLLESMKADDIDEDK 490
R MYH L A+IR+G+EVDGLL SMKAD I ED+
Sbjct: 288 NRRMYHTLIMANIRAGKEVDGLLASMKADKIVEDE 322
>gi|449523946|ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 461
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 167/423 (39%), Positives = 264/423 (62%), Gaps = 11/423 (2%)
Query: 34 VARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSE 93
V ++NLY RISP+GDP++S+TP+LDQWVLEG+ + + EL+ +I++LR KRFKHAL++S+
Sbjct: 26 VVKDNLYRRISPVGDPNISVTPLLDQWVLEGRLVQQDELRHIIKELRVYKRFKHALEISK 85
Query: 94 WMSGQG-LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGL 152
WMS + S D A++++LI +V GLE E YF+++ + K +++ ALLNCY E
Sbjct: 86 WMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYFDNMPSQLKRYQVHIALLNCYAHEKC 145
Query: 153 VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
VD++ + MQK+KEMG S L YN +M LY G+ E++ +L +MKE GV D F+Y I
Sbjct: 146 VDKANAFMQKIKEMGFANSPLPYNIMMNLYHQIGEFERLDSLLKEMKERGVYYDRFTYSI 205
Query: 213 CINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDI 272
I++Y A S+ +E ++++MES I +DW Y AN Y GL +K+I LKK E +
Sbjct: 206 RISAYAAASDFRGIEKIMEQMESNPSIVLDWNCYVIAANAYNKVGLIDKSISMLKKSEGL 265
Query: 273 VSK-SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELE 331
++ K +N + YA G KDE+ + W L K +K N+ +I+M+ SL+ + +++
Sbjct: 266 LANVKKKGFAFNVYLKLYARNGKKDEIHRIWNLY--KKEKIFNKGFISMITSLLILDDIK 323
Query: 332 EAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIA 391
AE++ +EWE YD R+PN+++ Y + G++EKA+ +L E+V + + SW +A
Sbjct: 324 GAERIYKEWETRKLSYDLRIPNLLVDAYCRAGLMEKAEVLLNEMVIVRRKFSVESWCYLA 383
Query: 392 AGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSIL-DWLGDNRDVEEVEAFVSSL 450
+GY K+ + +A E +K A +V + + V IL +L +DVEE E V+ L
Sbjct: 384 SGYLQKDQLPQAVETLKLAASVCPS------RLNYVKEILAAFLDGKQDVEETEKVVNLL 437
Query: 451 KIK 453
+ K
Sbjct: 438 REK 440
>gi|224138178|ref|XP_002322749.1| predicted protein [Populus trichocarpa]
gi|222867379|gb|EEF04510.1| predicted protein [Populus trichocarpa]
Length = 505
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 164/455 (36%), Positives = 271/455 (59%), Gaps = 19/455 (4%)
Query: 23 IFTRAY------RAVKPV--ARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQR 74
I R+Y R KP A N LY+RIS L D ++++ L+ WVLEGQ +++ +L+
Sbjct: 37 IINRSYSTTPTGRTKKPWTDAMNVLYNRISSLADQRITISLFLNHWVLEGQPVNKNQLRE 96
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQG-LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE 133
I++LR KR+ HAL++S WM+ G + D AVQLDLI KV G+E A+ FN+
Sbjct: 97 FIKELRFHKRYAHALEISTWMTDSGYFELASQDVAVQLDLISKVHGIEQAQKLFNNTPQH 156
Query: 134 DKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPD 193
KV K+Y ALLNCY + LV+++ S++Q+MK +G + L YN I+ Y TG +KI
Sbjct: 157 LKVLKVYSALLNCYAKAKLVEKAESVVQEMKSLGFANTLLVYNVILNFYYQTGNPDKINS 216
Query: 194 VLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYY 253
++ +M++NG+ D F++ I +++Y + S++ +E L +MES ++ +DW +Y+ A Y
Sbjct: 217 LMQEMEQNGIGCDKFAHSIQLSAYASVSDIVGIEKTLAKMESDPNVFLDWTSYTAAAKGY 276
Query: 254 IIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQL 313
I GL +KA+ L+K E +V+ + Y+ LI+ YA+ G +E+++ W L K K +K
Sbjct: 277 IKVGLVDKALEMLEKSERLVTGKRRGTAYDSLITLYAATGKTNEVLRIWELYK-KNEKVY 335
Query: 314 NRDYITMLGSLVKIGELEEAEKMLEEWELSCY-CYDFRVPNIILLGYSQKGMIEKADAVL 372
YI+++ SL+K+ + E AEK+ EEWE + CYD +PN ++ YS+KG++EKA+ ++
Sbjct: 336 KEAYISIITSLLKLDDFENAEKIFEEWEFQNHSCYDIHIPNFLIDAYSRKGLVEKAETLI 395
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILD 432
+ KG P +W +A GY KA E MK+A+ V + W+P ++++ L
Sbjct: 396 DRAISKGGEPNAKTWYHLATGYLQNGQTLKAVEAMKKAVVV--SGRMWKPSNEILANCLG 453
Query: 433 WLGDNRDVEEVEAFVSSLK------IKVQKRNMYH 461
+L D+ ++ F+ L+ + +Q+R + H
Sbjct: 454 YLKVEGDLGKLTNFMDLLRDNDIISLDIQERLLNH 488
>gi|148909871|gb|ABR18022.1| unknown [Picea sitchensis]
Length = 561
Score = 303 bits (777), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 172/458 (37%), Positives = 266/458 (58%), Gaps = 6/458 (1%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
+NLY RIS LGDP S L++W+ EG+++ + L+ ++R+LR R KHAL+V EWMS
Sbjct: 94 DNLYRRISRLGDPKRSAVEELERWITEGREVKKWVLREIVRELRKYYRHKHALEVFEWMS 153
Query: 97 GQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDES 156
+ SV D A+ L LI KV G+ SAE Y+ L+ +K Y ALLNCYV+E +++S
Sbjct: 154 KK-FPCSVGDRAMHLGLIAKVHGIASAEKYYVDLHHYEKNHLTYFALLNCYVQEKNIEKS 212
Query: 157 LSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINS 216
++M+++K++G +A Y +M LY NT Q EK+P V+ +MK+ G+ D Y I + S
Sbjct: 213 EAIMEELKDLGFIKTAFPYTEMMTLYMNTEQFEKVPLVIQEMKKKGISLDIHCYNIWMRS 272
Query: 217 YGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDI---V 273
Y A S++ + V E+E +I+ DW YST+AN YI A + +KA LK+ E+ +
Sbjct: 273 YAALSDMDQVAEVFNEIERDDNINTDWSIYSTLANIYINAKVLDKAGSALKEMENKMKEI 332
Query: 274 SKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEA 333
KD L YNHLIS + LGNKDE+ + W ++ K NR Y+ +L SLV +G++E A
Sbjct: 333 ETKKDQLAYNHLISLHGRLGNKDEVYRIWQSFELAFPKMTNRSYVCLLSSLVGMGDIEGA 392
Query: 334 EKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAG 393
E +++WE D R+ +L Y +KG ++KA+ +L+ +V KG P +W +A G
Sbjct: 393 EVFIKKWESMKTFDDSRIYYALLNAYIEKGWLQKAELLLERVVDKGGKPNAKTWETLAEG 452
Query: 394 YADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK-I 452
Y + KA E MK +L++ E N W+PK V ++L DV+ E F L+ +
Sbjct: 453 YIQNEQIHKAMEAMKRSLSI-EGNSPWQPKSVNVLALLKHFEKQGDVKSAEEFFKILRGV 511
Query: 453 KVQKRNMYHALTEAHIRSGQEVDGLLESMKADDIDEDK 490
K +Y++L ++ G+ + E M D++ D+
Sbjct: 512 KFVSTEIYNSLLRTYVYVGKVPPRISELMLEDNVSPDE 549
>gi|255553771|ref|XP_002517926.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542908|gb|EEF44444.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 156/412 (37%), Positives = 255/412 (61%), Gaps = 4/412 (0%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
+ LY RIS G P +S+ P+L++W+ EG + + ELQ+ ++QLR +RF HALQVSEWM+
Sbjct: 39 DTLYGRISKAGKPSISIVPILEKWLEEGNDVKKPELQKFVKQLRKYRRFTHALQVSEWMT 98
Query: 97 GQ-GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDE 155
+ G + D AV+LDLI KV GL AE YFNS+ D + ++YGALLNC L+ +
Sbjct: 99 DKKGCSLLPGDVAVRLDLISKVHGLVKAEEYFNSIPDTSRDRQVYGALLNCCAHSKLLGK 158
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
+ + MQKMK++G ++L+YN ++ LY++ G +EK+ ++ +M+ENG+ D +Y I +N
Sbjct: 159 AEATMQKMKDLGFVKNSLSYNVMLSLYSHMGNYEKLDPLVQEMEENGISCDRITYCIRLN 218
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK 275
+ S++ ME +L +ME +IS+ + Y AN Y+ AGL +K +I LK+ E ++S
Sbjct: 219 ACVNSSDIEGMEKLLMKMEVDPNISVGFHAYVIAANGYLKAGLVDKTLIMLKRSEQLISG 278
Query: 276 SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEK 335
+ Y L++ Y + GNK E+ + W K + + N YI M+ SL+K+ +++ AE+
Sbjct: 279 NTRRFAYEFLLTLYTASGNKAEVYRIWNKYK-EIGRFFNSGYICMISSLLKLDDIDGAER 337
Query: 336 MLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYA 395
+ EEW+ +D R+PN ++ YS+KG +EKA+ + +IV G+ P SW+ +AAGY
Sbjct: 338 IFEEWDSKKVLFDIRIPNSMVNVYSRKGHLEKAETYINKIVASGEEPDATSWNHLAAGYH 397
Query: 396 DKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFV 447
M KA E +++A++V + W+P +S+ L++L D E +E +
Sbjct: 398 SSGQMTKAVETIRKAISVSKPG--WKPSLLTLSACLEFLKGQGDAETLEELL 447
>gi|255553773|ref|XP_002517927.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542909|gb|EEF44445.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 507
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 169/454 (37%), Positives = 269/454 (59%), Gaps = 6/454 (1%)
Query: 39 LYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSG- 97
LY RI + DP S+ PVL+QWV EG + + LQ ++ ++ KRF HAL++S WM+
Sbjct: 50 LYDRIQIVRDPKESIIPVLNQWVSEGHTVGKALLQSLVHLMKGYKRFNHALEMSHWMTDC 109
Query: 98 QGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESL 157
+ + S D AV+L+LI +V G AE YF ++D+ K +YGALL+ YVRE V ++
Sbjct: 110 RYFSLSPSDVAVRLELIYRVYGSAHAEMYFEKISDKLKSGNVYGALLSGYVRENSVQKAE 169
Query: 158 SLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSY 217
+++Q+M+E G S+ YN ++ LY G EKI + +M+ NG+P D ++ R + +Y
Sbjct: 170 AVLQEMREKGIATSSFPYNIMINLYAQNGAFEKIDILKEEMERNGIPQDKYTMRNLMAAY 229
Query: 218 GARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSK 277
A S++S ME +L ++E+ + W YS A+ Y+ GL EKA+ L+K E+ + K
Sbjct: 230 VAASDISGMERILNQLETHPQLGHGWQAYSVAASGYLKVGLIEKALKMLRKMEETMPIGK 289
Query: 278 DALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKML 337
+N+L++ YA G KDE+ + W K + + + M+ SL K+ ++E AE++
Sbjct: 290 KTSAFNYLLTLYAKTGRKDELYRVWNSYKPLAEVK-ETQFCCMISSLEKVDDIEGAERIF 348
Query: 338 EEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADK 397
EEWE C YDFRV N +LL Y +KG+ KA+A K+ +G+TP ++W +A Y +
Sbjct: 349 EEWESQCMMYDFRVLNKLLLAYCRKGLYTKAEAAFKK-AAEGRTPYASTWITMAMSYIGQ 407
Query: 398 NNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK-IKVQK 456
N M KA E +K+A++V K W+P P +++ LD+L + DVE +E V SLK +
Sbjct: 408 NQMSKAVEMLKKAISV--SRKGWKPNPITLTTCLDYLEEQGDVEGIEEIVKSLKSTESLT 465
Query: 457 RNMYHALTEAHIRSGQEVDGLLESMKADDIDEDK 490
R++YH L + +G V +++ MK D+I D+
Sbjct: 466 RDIYHRLVRTYTAAGIPVTKVIDKMKMDNIAADE 499
>gi|224138182|ref|XP_002322750.1| predicted protein [Populus trichocarpa]
gi|222867380|gb|EEF04511.1| predicted protein [Populus trichocarpa]
Length = 516
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 156/409 (38%), Positives = 254/409 (62%), Gaps = 10/409 (2%)
Query: 48 DPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQG-LAFSVHD 106
D +VS+ PVLD+W+ EG+ I E + +I++LR +R+ HAL++S WM+ + LA +
Sbjct: 57 DHNVSVIPVLDKWIQEGETIWEDLIHALIKELRQYRRYHHALEISMWMTDKRYLALTSRA 116
Query: 107 HAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEM 166
AV+LDLI KV G+E E YFN++ + K + YGALLNCY V+++ ++MQ+M+E+
Sbjct: 117 VAVRLDLISKVHGIEQVENYFNNIPTKLKGLESYGALLNCYAYVKSVEKAEAVMQRMREL 176
Query: 167 GSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSM 226
G L + ++ LY TG EK+ ++ +M+ENG+ D F+Y I ++SY A S+ +
Sbjct: 177 GFARKPLVFTVMLNLYYKTGNTEKLDPLMREMEENGISFDKFAYCIRLSSYAAASDSEGL 236
Query: 227 ENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLI 286
E L+ +ES ++ +DW TY+TVAN Y GL +KA+ LK+CE +++ + + Y++L+
Sbjct: 237 EKTLKRIESDPNVVLDWATYATVANGYSKVGLLDKALEMLKRCERLITGERRSTPYDYLM 296
Query: 287 SHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYC 346
+ YA+ G K+++++ W L K + NR I+++ SL+K +LE AEK+ EEWE C
Sbjct: 297 TQYATTGTKEDVLRVWELHK---RYVGNRKNISVITSLLKFDDLESAEKIFEEWESQKLC 353
Query: 347 YDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFEC 406
D +PN ++ YS+KG++EKA+ +L+ + G P N+W ++A GY N KA E
Sbjct: 354 DDIIIPNFLVDAYSRKGLLEKAEMLLQRTMSNGTKPNANTWYLLAKGYLQHNQTPKAVEA 413
Query: 407 MKEALAVHEENKFWRPKPSLVS--SILDWLGDNRDVEEVEAFVSSLKIK 453
MKE + + R +PS VS + L L D+ D++ E F++ L+ K
Sbjct: 414 MKEMIVLSGP----RSRPSTVSWVACLQHLKDSGDMDNAEGFINLLREK 458
>gi|224121680|ref|XP_002330626.1| predicted protein [Populus trichocarpa]
gi|222872230|gb|EEF09361.1| predicted protein [Populus trichocarpa]
Length = 441
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 161/414 (38%), Positives = 256/414 (61%), Gaps = 11/414 (2%)
Query: 42 RISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQ-GL 100
RIS G+P VS+ PV++QW+ EG I + +LQ I+ R +RF HALQ+S+WMS + G
Sbjct: 9 RISRAGNPKVSIIPVIEQWLKEGNSIKQSDLQNFIKLFRRHRRFSHALQISQWMSDERGS 68
Query: 101 AFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLM 160
S D AV+LDLI KV GLE AE Y+NS+ D + ++YGALLNCY + ++++ + M
Sbjct: 69 EQSPGDFAVRLDLISKVHGLEQAEEYYNSIPDHLRGTQVYGALLNCYAHKRRLEKAEATM 128
Query: 161 QKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGAR 220
QKM+E+G L+YN ++ LY++ G++EK+ ++ +M+E GV D +++ I +++Y A
Sbjct: 129 QKMRELG-LVQTLSYNVMLSLYSHMGRYEKLEALVKEMEEKGVNSDIYTFNIRLHAYVAT 187
Query: 221 SELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK---SK 277
S + ME +L +ME+ S I++D+ T+ VAN Y+ AGL EK+I+ LK+ E++ +
Sbjct: 188 SNIEEMEKLLMKMETDSLINIDFHTFFAVANGYLKAGLLEKSIVMLKRAEELTVPMVGTT 247
Query: 278 DALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKML 337
A Y L++ Y S GNKD + + W K + N YI M+ SL+++G+++ AE +
Sbjct: 248 KAHAYEMLLTLYGSAGNKDGVYRVWNSYK-NTGRIFNSTYICMINSLMRLGDIDGAEWIS 306
Query: 338 EEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADK 397
EEW YD R+PN ++ YS+KG+ +KA+ + +IV+ G +SW +A GY
Sbjct: 307 EEWVSRKTLYDIRIPNTMIRAYSRKGLWKKAEEYVNKIVESGMQLEASSWDHLATGYHFG 366
Query: 398 NNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWL---GDNRDVEEVEAFVS 448
M KA E +K+A+++ + W+P P + + L +L GD EE+ FVS
Sbjct: 367 GQMAKAVETLKKAISISKPG--WKPNPYTLKTCLWYLESKGDEEAAEELLKFVS 418
>gi|359485373|ref|XP_003633265.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Vitis vinifera]
Length = 461
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 153/429 (35%), Positives = 258/429 (60%), Gaps = 7/429 (1%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
++LY RI + DP S++P+L+QW+ EGQ +S+ +LQ ++R ++ +RF HAL++S+WM+
Sbjct: 22 SSLYDRIQAVRDPKASISPLLNQWIEEGQTVSKPQLQSLVRIMKDFRRFHHALEISQWMT 81
Query: 97 GQG-LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDE 155
+ + D A++LDLI V G AE+YFN++ + K YGALL+ YVRE V++
Sbjct: 82 DRRYFTLTPSDAAIRLDLISMVHGRVQAESYFNNIPNNLKTSSAYGALLSGYVREKSVEK 141
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
+ + MQKM+EM S+ YN ++ LY+ TG H KI ++ +M+ +P D F+ R +
Sbjct: 142 AEATMQKMREMDFATSSFPYNMLINLYSQTGNHGKIEALIQEMQSKAIPCDAFTVRNLMV 201
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK 275
+Y A S++S+ME L ME HIS+DW YS A+ Y+ GL +KA+ LKK E
Sbjct: 202 AYVAASDISAMEKFLNRMEEDPHISVDWNIYSVAASGYLKVGLIDKALEMLKKIESNRPH 261
Query: 276 SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEK 335
+ + L+S YA G+K E+ + W L K + Y M+ L K+ ++E AEK
Sbjct: 262 LERLSAFKFLLSLYARTGHKQELYRVWNL--YKPSYEYPEAYSCMITCLTKLDDIEGAEK 319
Query: 336 MLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYA 395
+ +EWE C YDFRV N +L Y ++ + +KA++++ +++++ + P ++W+I+A GY
Sbjct: 320 IFQEWECECTMYDFRVLNRLLSAYCKRCLFDKAESLVNKVIEE-RMPYASTWNILAKGYV 378
Query: 396 DKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK-IKV 454
+ M KA E +K+A++V K WRP ++ + +++L ++EE+E K + +
Sbjct: 379 EDKQMPKAVEMLKKAISVG--RKGWRPNSIILDACIEYLEGQGNLEEIEEIARLCKNLGI 436
Query: 455 QKRNMYHAL 463
+++H L
Sbjct: 437 PDGDIHHRL 445
>gi|302143278|emb|CBI21839.3| unnamed protein product [Vitis vinifera]
Length = 501
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 150/409 (36%), Positives = 250/409 (61%), Gaps = 6/409 (1%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
++LY RI + DP S++P+L+QW+ EGQ +S+ +LQ ++R ++ +RF HAL++S+WM+
Sbjct: 22 SSLYDRIQAVRDPKASISPLLNQWIEEGQTVSKPQLQSLVRIMKDFRRFHHALEISQWMT 81
Query: 97 GQG-LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDE 155
+ + D A++LDLI V G AE+YFN++ + K YGALL+ YVRE V++
Sbjct: 82 DRRYFTLTPSDAAIRLDLISMVHGRVQAESYFNNIPNNLKTSSAYGALLSGYVREKSVEK 141
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
+ + MQKM+EM S+ YN ++ LY+ TG H KI ++ +M+ +P D F+ R +
Sbjct: 142 AEATMQKMREMDFATSSFPYNMLINLYSQTGNHGKIEALIQEMQSKAIPCDAFTVRNLMV 201
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK 275
+Y A S++S+ME L ME HIS+DW YS A+ Y+ GL +KA+ LKK E
Sbjct: 202 AYVAASDISAMEKFLNRMEEDPHISVDWNIYSVAASGYLKVGLIDKALEMLKKIESNRPH 261
Query: 276 SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEK 335
+ + L+S YA G+K E+ + W L K + Y M+ L K+ ++E AEK
Sbjct: 262 LERLSAFKFLLSLYARTGHKQELYRVWNL--YKPSYEYPEAYSCMITCLTKLDDIEGAEK 319
Query: 336 MLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYA 395
+ +EWE C YDFRV N +L Y ++ + +KA++++ +++++ + P ++W+I+A GY
Sbjct: 320 IFQEWECECTMYDFRVLNRLLSAYCKRCLFDKAESLVNKVIEE-RMPYASTWNILAKGYV 378
Query: 396 DKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVE 444
+ M KA E +K+A++V K WRP ++ + +++L ++EE+E
Sbjct: 379 EDKQMPKAVEMLKKAISVGR--KGWRPNSIILDACIEYLEGQGNLEEIE 425
>gi|224121672|ref|XP_002330624.1| predicted protein [Populus trichocarpa]
gi|222872228|gb|EEF09359.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 155/416 (37%), Positives = 258/416 (62%), Gaps = 4/416 (0%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
++L RIS + DP V + PV+++WV EGQ ++ +L+ IR+LR RF HALQ+S+WMS
Sbjct: 33 HSLNRRISMVEDPMVPVIPVIEKWVQEGQVVTNSDLKHFIRKLRKIHRFSHALQISQWMS 92
Query: 97 GQ-GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDE 155
Q G S D AV+LDLI KV GLE A TYFNS+ + + ++YGALLNCY ++E
Sbjct: 93 DQRGHNLSPGDVAVRLDLISKVHGLEQAVTYFNSVPESLRGLEVYGALLNCYAHYKHLEE 152
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
+ + M+KM+EMG + L+YN ++ LY G++EKI ++ +M++ G+ N +Y+I +N
Sbjct: 153 AEATMRKMREMGFVRNVLSYNVMLNLYYQMGKYEKIQVLMQEMEKWGICFSNITYKILLN 212
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK 275
+Y A S + ++ +L +ME+ +S+DW Y AN Y+ AGL +K + L + E ++S
Sbjct: 213 AYVATSNIEEIKKILMKMEADPLVSIDWYAYVVAANGYLKAGLIDKTLTMLWRSEQLISG 272
Query: 276 SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEK 335
L+S Y ++GNK+++ + W L K K + LN Y+ M+ SL+K+ +++ AE+
Sbjct: 273 KSARFACETLLSLYTAVGNKEQVYRVWNLYKTK-GRSLNSSYLCMINSLLKLDDVDGAER 331
Query: 336 MLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYA 395
+ EEW +D R+PN+++ YS+KG+ EKA+A + +IV G ++ +A GY
Sbjct: 332 IWEEWVSIVKFFDIRIPNVMVSAYSKKGLWEKAEAFVGKIVASGIKIEASTLDRLATGYH 391
Query: 396 DKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK 451
+ M KA E +K+A+++ + W+P +++ L++L DV+++E + LK
Sbjct: 392 VRGQMLKASETIKKAISISQPG--WKPNVYTLAACLEYLKGREDVKKIEDPLKILK 445
>gi|388517969|gb|AFK47046.1| unknown [Lotus japonicus]
Length = 496
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 157/419 (37%), Positives = 252/419 (60%), Gaps = 5/419 (1%)
Query: 24 FTRAYRAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRK 83
F Y PV + L +R+ GDP + P+L+QWV G I++++LQR+I +L +
Sbjct: 21 FPLYYSTEAPVDFSALETRVLKSGDPRTPMAPILNQWVEGGGDITQIQLQRLITRLAYFR 80
Query: 84 RFKHALQVSEWMSGQ-GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGA 142
RF HALQVSEWMS + S A ++ LI KV GL+ AE +F + D+ + K+Y +
Sbjct: 81 RFTHALQVSEWMSNERNYDLSSGLIAKRIHLISKVHGLKKAEDFFQGIPDDKRGFKIYAS 140
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
LL+CY ++E+ ++M+K+KE+ + YN ++ LY G++EK+ ++ +MKEN
Sbjct: 141 LLSCYAEHKSLEEAEAIMKKIKELRPMHLTVCYNILLKLYAQKGKYEKLDRLMQEMKEND 200
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
+ + ++ I +N+Y A ++ ME +L +ME+ ++DW TYST AN Y+ AG EKA
Sbjct: 201 LC-NGATFTIRLNAYVAAKDVEGMEKLLMQMEADPMATVDWYTYSTAANGYLKAGNVEKA 259
Query: 263 IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLG 322
+ LKK E V K L Y L S YA++GNKDE+ + W K + N YI ML
Sbjct: 260 LAALKKSEQSVKGKKLRLAYESLQSTYAAIGNKDEVYRLWNRIK-NLQNCWNSSYICMLS 318
Query: 323 SLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTP 382
SL+K+ + + AEK+L EWE +D R+PN+++ Y ++G+++KA+A +++++ GK
Sbjct: 319 SLLKLDDFDGAEKILAEWESEHKNFDTRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKL 378
Query: 383 TPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVE 441
+SW +AAGY N+MEKA + MK+A+ + WRP PS + + + +L + D+E
Sbjct: 379 DGSSWDRMAAGYHMDNDMEKAVQTMKKAILANRPG--WRPSPSTLVACITYLKEKLDLE 435
>gi|297832672|ref|XP_002884218.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330058|gb|EFH60477.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 491
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 153/415 (36%), Positives = 244/415 (58%), Gaps = 4/415 (0%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
+ L R++ GDP S+ VLD W+ +G + EL +I+ LR RF HALQ+S+WMS
Sbjct: 39 DTLQRRVARAGDPSASIIRVLDGWLDQGHLVKTSELHGIIKMLRKFSRFSHALQISDWMS 98
Query: 97 GQGL-AFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDE 155
+ + D A++LDLI KV GL AE +F ++ E + LYGALLNCY + ++ +
Sbjct: 99 EHRVHEITEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHK 158
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
+ + Q+MKE+G L YN ++ LY TG++ + +L +M++ V PD F+ ++
Sbjct: 159 AEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDGTVKPDIFTVNTRLH 218
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK 275
+Y A S++ ME L E+ + + +DW TY+ AN YI AGL EKAI L+K E +V+
Sbjct: 219 AYSAVSDVEGMEKFLMRCEADTGLHLDWRTYADTANGYIKAGLTEKAIEMLRKSEQMVNP 278
Query: 276 SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEK 335
K Y L+S Y + G K+E+ + W L K + N YI+++ +L+K+ ++EE EK
Sbjct: 279 RKRKHAYEVLMSFYGAAGKKEEVYRLWSLYK-ELDGFYNTGYISVISALLKMDDIEEVEK 337
Query: 336 MLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYA 395
++EEWE +D R+P++++ GY +KGM+EKA+ V+ +V+K + ++W +A GY
Sbjct: 338 IMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNMLVQKWRVEDTSTWERLALGYK 397
Query: 396 DKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL 450
MEKA E K A+ V + WRP ++ S +D+L RD+E + + L
Sbjct: 398 MAGEMEKAVEKWKRAIDVSKPG--WRPHQVVLMSCVDYLEGRRDMESLRKILRLL 450
>gi|15225409|ref|NP_179663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206559|sp|Q9SKU6.1|PP166_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g20710, mitochondrial; Flags: Precursor
gi|4454477|gb|AAD20924.1| hypothetical protein [Arabidopsis thaliana]
gi|51315392|gb|AAT99801.1| At2g20710 [Arabidopsis thaliana]
gi|330251965|gb|AEC07059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 490
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 151/406 (37%), Positives = 239/406 (58%), Gaps = 4/406 (0%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
+ L R++ GDP S+ VLD W+ +G + EL +I+ LR RF HALQ+S+WMS
Sbjct: 38 DTLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMS 97
Query: 97 GQGL-AFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDE 155
+ S D A++LDLI KV GL AE +F ++ E + LYGALLNCY + ++ +
Sbjct: 98 EHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHK 157
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
+ + Q+MKE+G L YN ++ LY TG++ + +L +M++ V PD F+ ++
Sbjct: 158 AEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLH 217
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK 275
+Y S++ ME L E+ + +DW TY+ AN YI AGL EKA+ L+K E +V+
Sbjct: 218 AYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNA 277
Query: 276 SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEK 335
K Y L+S Y + G K+E+ + W L K + N YI+++ +L+K+ ++EE EK
Sbjct: 278 QKRKHAYEVLMSFYGAAGKKEEVYRLWSLYK-ELDGFYNTGYISVISALLKMDDIEEVEK 336
Query: 336 MLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYA 395
++EEWE +D R+P++++ GY +KGM+EKA+ V+ +V+K + ++W +A GY
Sbjct: 337 IMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYK 396
Query: 396 DKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVE 441
MEKA E K A+ V + WRP ++ S +D+L RD+E
Sbjct: 397 MAGKMEKAVEKWKRAIEVSKPG--WRPHQVVLMSCVDYLEGQRDME 440
>gi|356522970|ref|XP_003530115.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Glycine max]
Length = 546
Score = 277 bits (708), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 164/455 (36%), Positives = 257/455 (56%), Gaps = 8/455 (1%)
Query: 34 VARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSE 93
V N++Y RIS +P V VL+QW EG+ +++ EL RV+++LR KRF+ AL+V +
Sbjct: 78 VGWNDVYRRISLNPNPQVGSAEVLNQWENEGRHLTKWELSRVVKELRKYKRFRRALEVYD 137
Query: 94 WMSGQGLAFSVH--DHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREG 151
WM+ + F V D A+QLDLI KVRGL SAE +F SL D+ K K YGALLN YV
Sbjct: 138 WMNNRPERFRVSESDAAIQLDLIAKVRGLSSAEAFFLSLEDKLKDKKTYGALLNVYVHSR 197
Query: 152 LVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYR 211
+++ SL M+ G AL +N +M LY N ++ K+ + +M E + D ++Y
Sbjct: 198 SKEKAESLFDTMRSKGYVIHALPFNVMMTLYMNLNEYAKVDILASEMMEKNIQLDIYTYN 257
Query: 212 ICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCED 271
I ++S G++ + ME V ++ME I +W T+ST+A+ YI EKA L+K E
Sbjct: 258 IWLSSCGSQGSVEKMEQVFEQMEKDPSIIPNWSTFSTMASMYIRMDQNEKAEECLRKVEG 317
Query: 272 IVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELE 331
+ K +D + +++L+S Y S+G KDE+ + W K N Y ++ SLVK+ ++E
Sbjct: 318 RI-KGRDRIPFHYLLSLYGSVGKKDEVCRVWNTYKSIFPSIPNLGYHAIISSLVKLDDIE 376
Query: 332 EAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIA 391
AEK+ EEW YD R+ N+++ Y +KG +KA + ++++ G P N+W I++
Sbjct: 377 VAEKLYEEWISVKSSYDPRIGNLLIGWYVKKGDTDKALSFFEQMLNDGCIPNSNTWEILS 436
Query: 392 AGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK 451
G+ + +A C+KEA +K WRPKPS +S+ L+ + D+E E + L+
Sbjct: 437 EGHIADKRISEAMSCLKEAFMAAGGSKSWRPKPSYLSAFLELCQEQDDMESAEVLIGLLR 496
Query: 452 -IKVQKRNMYHALTEAHIRSGQEVDGLLESMKADD 485
K K +Y +L I S E+ + + + DD
Sbjct: 497 QSKFNKSKVYASL----IGSSDELPKIDTADRTDD 527
>gi|225459164|ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Vitis vinifera]
Length = 475
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 156/456 (34%), Positives = 265/456 (58%), Gaps = 4/456 (0%)
Query: 36 RNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWM 95
R++L SR+ L P S T VL W+ +G K++ +L+ V RQL KR KHAL++ WM
Sbjct: 10 RDDLTSRMLKLVFPRRSATAVLQNWIDQGHKVTASDLRNVSRQLLKSKRHKHALEILAWM 69
Query: 96 SGQG-LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVD 154
Q S DHA++L+LI K++ L AE YF L + LL+ YV+E ++
Sbjct: 70 EAQNRFQMSAADHAIRLELIIKIQSLAEAEEYFEHLPNSSSRKAACLPLLHAYVKERAIE 129
Query: 155 ESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICI 214
++ +LM K+ ++G S +N +M LY T Q E++P V+L MK+N +P + SY + +
Sbjct: 130 KAEALMLKLNDLGLTVSPHPFNEMMKLYMATSQFERVPTVILQMKQNKIPLNVLSYNLWM 189
Query: 215 NSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVS 274
++ S L+S E V ++M ++ + W T ST+AN Y+ +GL +KA + LK E +S
Sbjct: 190 SACSEVSGLASAEMVYKDMVDDKNVEVGWSTLSTLANIYLKSGLIKKANLALKNAEKKLS 249
Query: 275 KSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
+ + LGY LI+ YASL NK+E+++ W K + + +Y+ +L LVK+G++ EAE
Sbjct: 250 -AHNRLGYFFLITMYASLSNKEEVLRLWEASKKVGGRITSTNYMCILLCLVKLGDIAEAE 308
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGY 394
++ EWE C+ YD RV N++L Y + G ++KA+++ +++G P +W I+ G+
Sbjct: 309 RIFREWESKCWKYDIRVSNVLLGAYMRTGSMDKAESLHLHTLERGGCPNYKTWEILMEGW 368
Query: 395 ADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL-KIK 453
NM+KA MK+ ++ + WRP LV++I +L ++ +V ++ +V + ++
Sbjct: 369 MKSQNMDKAINAMKKGFSMLKHCD-WRPNHGLVTAIARYLEEHGNVNDLNQYVKVIHQLG 427
Query: 454 VQKRNMYHALTEAHIRSGQEVDGLLESMKADDIDED 489
V K +Y +L H+ + V +L+ M+ D+I+ D
Sbjct: 428 VAKLPLYKSLLRMHLLFQRPVFDILKMMEKDEIEMD 463
>gi|359480173|ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02370, mitochondrial-like [Vitis vinifera]
Length = 506
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 155/461 (33%), Positives = 258/461 (55%), Gaps = 3/461 (0%)
Query: 30 AVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHAL 89
A + V + LY R+S LG S+ L++ + EG+ I++ EL I+QLR ++F+HAL
Sbjct: 37 ASRSVRQPRLYHRLSALGATGGSVADTLNEHIKEGKLIAKHELSSCIKQLRKYRQFQHAL 96
Query: 90 QVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVR 149
++ +WM + + FS D+AV+LDL+ K +GL +AE YFN+L+ K YG LLNCY +
Sbjct: 97 EIMDWMENRKIFFSYADYAVRLDLLSKTKGLATAEEYFNNLSPSAKNLLTYGTLLNCYCK 156
Query: 150 EGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFS 209
E + +++L+L +KM E+ ++L +N +M L+ G+ E +P ++ +MK+ + PD F+
Sbjct: 157 EKMEEKALALFEKMDELNFASTSLTFNNLMSLHMRLGKPEMVPPLVDEMKKRSISPDTFT 216
Query: 210 YRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC 269
Y I + SY +++ E VL+E++ ++ + W TYS +A Y+ A L EKA + LKK
Sbjct: 217 YNILMQSYARLNDIEGAERVLEEIKRENEDKLSWTTYSNLAAVYVNARLFEKAELALKKL 276
Query: 270 EDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGE 329
E+ + D L Y+ LIS YA + N E+ + W K K N Y ML +L + +
Sbjct: 277 EEEMG-FHDRLAYHFLISLYAGINNLSEVNRVWNSLKSAFPKTNNMSYFIMLQALANLND 335
Query: 330 LEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSI 389
++ + EEW+ SC+ +D R+ N+ + + MI+ A+++L E VK+ P + +
Sbjct: 336 VDGLKICFEEWKSSCFSFDVRLANVAVRAFLGWDMIKDAESILYEAVKRSSGPFYTALDM 395
Query: 390 IAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSS 449
A + ++ A + M EA A +N W+P P V + L + + +DVE E F
Sbjct: 396 FMAHHLKVREIDTALKYM-EAAASEVKNNEWQPAPERVLAFLKYFEEEKDVEGAEKFCKI 454
Query: 450 LK-IKVQKRNMYHALTEAHIRSGQEVDGLLESMKADDIDED 489
LK I N Y L + + +G+ + + MK DDI+ D
Sbjct: 455 LKNISGLDSNAYQLLLQTXVAAGRTEPEMRKRMKEDDIEVD 495
>gi|255573975|ref|XP_002527905.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532680|gb|EEF34462.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 490
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 143/452 (31%), Positives = 260/452 (57%), Gaps = 4/452 (0%)
Query: 39 LYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQ 98
LY R+ G +V + L+Q++ +++ + E+ +++LRSR + AL++SE MS +
Sbjct: 25 LYFRLFKEGSSEVKVREQLNQFLKSSKRVYKWEVGDTLKKLRSRGLYYPALKLSEAMSKR 84
Query: 99 GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLS 158
G+ +V D A+ LDL+ K RG+ +AE +F L + K YGALLNCY + + +E+ +
Sbjct: 85 GMNKTVSDQAIHLDLVAKTRGIPAAEIFFIDLPETSKNHLTYGALLNCYCNQLMTEEAEA 144
Query: 159 LMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYG 218
LM+KMKE+ S+++YN +M LYT GQ E+IP ++ +MK + + PD+++Y + + +
Sbjct: 145 LMEKMKELNLGLSSMSYNSLMTLYTKIGQPERIPGIIQEMKSDSIMPDSYTYNVWMRALA 204
Query: 219 ARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKD 278
A +++S E V++EM+ ++ DW TYS +A+ Y+ A L EKA LK+ E + +D
Sbjct: 205 AVNDISGAERVIEEMKRDGRVAADWTTYSNLASIYVDAQLFEKAEKTLKELEK-RNVHRD 263
Query: 279 ALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLE 338
+ LI+ Y +GN E+ + W ++ K N Y+ M+ LV + +L AEK
Sbjct: 264 HSAFQFLITLYGRIGNLHELYRIWRSLRLAFPKTSNISYLNMIQVLVNLKDLPGAEKCFR 323
Query: 339 EWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKN 398
EWE +C YD RV N+++ Y++KG++EKA+ + + + +G P +W I + Y +
Sbjct: 324 EWESNCSGYDIRVANVLIKAYAKKGLLEKAEELKERAIGRGAKPNAKTWEIFSDYYFENG 383
Query: 399 NMEKAFECMKEALAVHE-ENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQ-- 455
+++ + EC+ A++ + + W P P +V+S + +DV+ E F+ LK
Sbjct: 384 DIKLSVECLANAISKGRGDGQKWIPSPEVVASFMAHFEQQKDVDGAEGFIEILKKATDDV 443
Query: 456 KRNMYHALTEAHIRSGQEVDGLLESMKADDID 487
+ N++ +L + +G+ L +K ++++
Sbjct: 444 EANVFESLIRTYAAAGRTSQVLRRRLKMENVE 475
>gi|356503236|ref|XP_003520417.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Glycine max]
Length = 555
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 155/423 (36%), Positives = 243/423 (57%), Gaps = 4/423 (0%)
Query: 32 KPVAR-NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQ 90
+P+ R N++Y RIS +P V VL+QW EG+ +++ EL RV+++LR KRF AL+
Sbjct: 74 RPIVRWNDVYRRISLNQNPQVGSAEVLNQWENEGRHLTKWELSRVVKELRKYKRFPRALE 133
Query: 91 VSEWMSGQGLAFSVH--DHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYV 148
V +WM+ + F V D A+QLDLI KVRG+ SAE +F SL D+ K + YGALLN YV
Sbjct: 134 VYDWMNNRPERFRVSESDAAIQLDLIAKVRGVSSAEAFFLSLEDKLKDKRTYGALLNVYV 193
Query: 149 REGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNF 208
+++ SL M+ G AL N +M LY N ++ K+ + +M E + D +
Sbjct: 194 HSRSKEKAESLFDTMRSKGYVIHALPINVMMTLYMNLNEYAKVDMLASEMMEKNIQLDIY 253
Query: 209 SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKK 268
+Y I ++S G++ + ME V ++ME I +W T+ST+A+ YI EKA L+K
Sbjct: 254 TYNIWLSSCGSQGSVEKMEQVFEQMERDPTIVPNWSTFSTLASMYIRMNQNEKAEKCLRK 313
Query: 269 CEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIG 328
E + K +D + +++L+S Y S+G KDE+ + W K + N Y ++ SLVK+
Sbjct: 314 VEGRI-KGRDRIPFHYLLSLYGSVGKKDEVYRVWNTYKSIFPRIPNLGYHAIISSLVKLD 372
Query: 329 ELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWS 388
++E AEK+ EEW YD R+ N+++ Y +K +KA + ++I G P N+W
Sbjct: 373 DIEGAEKLYEEWISVKSSYDPRIGNLLMGWYVKKDDTDKALSFFEQISNDGCIPNSNTWE 432
Query: 389 IIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVS 448
I++ G+ + +A C+KEA V +K WRPKPS +S+ L+ + D+E E +
Sbjct: 433 ILSEGHIADKRISEALSCLKEAFMVAGGSKSWRPKPSYLSAFLELCQEQNDMESAEVLIG 492
Query: 449 SLK 451
L+
Sbjct: 493 LLR 495
>gi|255548417|ref|XP_002515265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545745|gb|EEF47249.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 155/461 (33%), Positives = 262/461 (56%), Gaps = 7/461 (1%)
Query: 31 VKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQ 90
V P LY ++S LG S++ L++ ++EG+ I+++EL R IR+LR +RF HA +
Sbjct: 32 VSPRQSEKLYHKLSALGATGGSVSRTLNEHIMEGKTITKIELSRCIRELRKYRRFDHAFE 91
Query: 91 VSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL-YGALLNCYVR 149
+ EWM + + FS D A++LDLIGK RG+ +AE YFN L+ K YGALLNCY +
Sbjct: 92 IMEWMEKRKMNFSYADRAIRLDLIGKARGIAAAEDYFNGLSPSAKNHHTSYGALLNCYCK 151
Query: 150 EGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFS 209
E + D++L+L Q+M E S+L +N +M +Y GQ EK+P ++ +MK+ V P +F+
Sbjct: 152 ELMSDKALALFQEMDEKKFLYSSLPFNNLMSMYMRLGQPEKVPPLVDEMKKRKVSPCSFT 211
Query: 210 YRICINSYGARSELSSMENVLQEMESQ-SHISMDWGTYSTVANYYIIAGLKEKAIIYLKK 268
Y I + SYG ++ ++ VL+E+ + ++ W TYS +A Y+ AG+ EKA LKK
Sbjct: 212 YNIWMQSYGCLNDFQGVDRVLREIVNDGGKDNLQWTTYSNLATIYLKAGIFEKAESALKK 271
Query: 269 CEDIVS-KSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKI 327
E I+ ++++A Y+ LIS YA GN +E+ + WGL K N Y+ ML +L K+
Sbjct: 272 LEAIMGFRNREA--YHFLISIYAGTGNSNEVNRVWGLLKSSFNMINNLSYLVMLQALAKL 329
Query: 328 GELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSW 387
++E K EWE C YD R+ N+ + + Q M E+A+ + + +K+ + P +
Sbjct: 330 KDVEGVAKCFREWESGCTNYDMRIANVAIRVFLQHDMYEEAELIFDDALKRTRGPFFKAR 389
Query: 388 SIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFV 447
+ + ++ A + M+ A + E+++ W+P V++ D+ +DV+ E
Sbjct: 390 ERFMLFFLKIHQLDLALKHMRAAFSESEKHE-WKPLQETVNAYFDYFRTEKDVDGAEKLS 448
Query: 448 SSLK-IKVQKRNMYHALTEAHIRSGQEVDGLLESMKADDID 487
LK I ++Y L + +I +G+ + + ++ D+I+
Sbjct: 449 KILKHINCLNSSVYSLLLKTYIAAGKLAPEMRQRLEEDNIE 489
>gi|302143279|emb|CBI21840.3| unnamed protein product [Vitis vinifera]
Length = 446
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 149/417 (35%), Positives = 240/417 (57%), Gaps = 58/417 (13%)
Query: 36 RNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWM 95
+ +L SRISP D VS+ P L+QW EG+ I + +L R+IR+LR+ KR+ HAL++ EW+
Sbjct: 34 KESLQSRISPAIDLRVSIVPALEQWRKEGRSIKQQDLHRLIRKLRTFKRYNHALEIYEWI 93
Query: 96 SGQG-LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVD 154
+ S D A+QLDLI KV GLE AE YFN + + ++YGALLNCY ++ ++
Sbjct: 94 RDKFYFDISPGDVAIQLDLISKVHGLEQAEKYFNETPNSLRSFQVYGALLNCYSQKKSLE 153
Query: 155 ESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICI 214
++ ++MQ+M++MG F L+YN ++ LY+ G+HEK+ +++ +M+ENG+ D+F+Y I +
Sbjct: 154 KAEAIMQEMRDMG-FVKTLSYNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSFTYCIRL 212
Query: 215 NSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVS 274
N+Y A S++ ME +L ++E+ ++ DW Y AN Y+ A LKEKA+
Sbjct: 213 NAYCATSDMEGMEKLLMKLETDPAVNSDWNAYIVAANGYLKADLKEKAV----------- 261
Query: 275 KSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
EM+K SL+K+ +++ AE
Sbjct: 262 ----------------------EMLK---------------------NSLLKLDDMDGAE 278
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGY 394
K EEW +DFRVPN+++ Y +KG++EKA+ ++ +++G+ P +W +AAGY
Sbjct: 279 KTFEEWLSGNKFFDFRVPNLLIRAYCKKGLLEKAEQLVSRAIEQGEEPIAVTWDALAAGY 338
Query: 395 ADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK 451
+ N MEKA + +K+AL + W+P P +S+ L++L DVEE E + L+
Sbjct: 339 HENNQMEKAVDTLKKALLATSQG--WKPNPVTLSACLEYLKGKGDVEEAENLIRLLR 393
>gi|225468646|ref|XP_002267979.1| PREDICTED: pentatricopeptide repeat-containing protein At1g60770
[Vitis vinifera]
Length = 489
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 143/452 (31%), Positives = 256/452 (56%), Gaps = 4/452 (0%)
Query: 39 LYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQ 98
LY R+ G +VS+ L+ ++ +++ + E+ +++LR RKRF AL++SE M+ +
Sbjct: 24 LYDRLFKDGSSEVSVRQQLNHFLKSSKRVFKWEVGDTVKKLRDRKRFYPALKLSETMAKR 83
Query: 99 GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLS 158
G+ ++ D A+ LDLI K RG+ +AE YF L + K YGALLNCY +E L +++ +
Sbjct: 84 GMNMTISDQAIYLDLITKTRGVAAAENYFIDLPETSKNHLTYGALLNCYCKELLTEKAEA 143
Query: 159 LMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYG 218
LM++MKE+ S++ YN +M LYT GQ EKIP ++ ++K + PD+++Y I + +
Sbjct: 144 LMERMKELKLGLSSMPYNSLMTLYTKIGQPEKIPTIIQELKSLDIMPDSYTYNIWMRALA 203
Query: 219 ARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKD 278
A +++S +E V++EM+ ++ DW TYS +A+ Y+ AG+ EKA LK+ E + +D
Sbjct: 204 AVNDISGVERVIEEMKRDGRVASDWTTYSNLASIYVDAGVFEKAEKALKELEK-RNACRD 262
Query: 279 ALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLE 338
+ LI+ Y +GN E+ + W ++ K N Y+ M+ LV + +L AEK
Sbjct: 263 LTAFQFLITLYGRIGNLLEVYRVWRSLRLAFPKTANVSYLNMIQVLVNLKDLPGAEKCFR 322
Query: 339 EWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKN 398
EWE C YD RV N ++ Y++ G++EKA+ + + ++G P +W I A +
Sbjct: 323 EWESGCSIYDIRVANALIGAYAKDGLLEKAEELKEHARRRGAKPNAKTWEIFLAYHLKNR 382
Query: 399 NMEKAFECMKEALAVHE-ENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKR 457
M++A +C+ A++ + + W P P ++ + +DV+ E F+ LK V+
Sbjct: 383 EMKQAVDCVANAISTGRGDGQKWVPSPEIIGVFMQHFEQEKDVDGAEGFLEILKSTVEDL 442
Query: 458 N--MYHALTEAHIRSGQEVDGLLESMKADDID 487
++ +L + +G+ + +K ++++
Sbjct: 443 GVEVFESLIRIYAAAGRTSPVMRRRLKMENVE 474
>gi|449458295|ref|XP_004146883.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial-like [Cucumis sativus]
gi|449518825|ref|XP_004166436.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial-like [Cucumis sativus]
Length = 474
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 257/451 (56%), Gaps = 4/451 (0%)
Query: 39 LYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQ 98
LY R+S LG S+ ++Q+++EG + + EL++ I++LR +R+ H LQ+ EWM +
Sbjct: 11 LYPRLSALGATGGSVAKTINQFIMEGNIVKKYELEKCIKELRKYRRYHHCLQIMEWMETR 70
Query: 99 GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLS 158
+ +S D+A++LDLI KV G+ +AE YF L K YGALLNCY +E + +++L+
Sbjct: 71 KINYSFTDYALRLDLISKVNGVTAAEKYFYDLPPSAKNRCTYGALLNCYCKEMMEEKALT 130
Query: 159 LMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYG 218
L +KM E+ ++L++N +M +Y EK+P ++ +MK+ G F+Y + +NS
Sbjct: 131 LFKKMDEL-KISTSLSFNNLMTMYMRMDHPEKVPPLIGEMKQRGFYLTTFTYNVWMNSCA 189
Query: 219 ARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC-EDIVSKSK 277
+ +++ +E +L+EM+ + DW TYS +A++Y+ AG EKA + LKK E++ S
Sbjct: 190 SLNDIGKVEEILEEMKMEDRNKFDWTTYSNLASFYVKAGQFEKAELALKKLEEEMKSDKN 249
Query: 278 DALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKML 337
D L Y+ LIS YAS N E+ + W K N Y+ ML +L K+ ++E ++
Sbjct: 250 DRLVYHCLISLYASTSNLSEVNRIWNALKSVYSTMTNISYLVMLQALRKLKDIEGLKRTY 309
Query: 338 EEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADK 397
+EWE +C +D R+ N I+ Y Q+ M E A + ++ K+ K P + + +
Sbjct: 310 KEWESNCRNFDLRIVNDIIGAYLQQDMYEDAAMIFEDATKRSKGPFSRAREMFMVYFLKL 369
Query: 398 NNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK-IKVQK 456
++ AF ++ AL+ +E K W P + ++ L++ + +DVE E F LK +K
Sbjct: 370 KQVDSAFSHLESALSESKE-KEWHPSLATTTAFLNYFEEEKDVEGAEDFARILKRLKCLD 428
Query: 457 RNMYHALTEAHIRSGQEVDGLLESMKADDID 487
+ YH L + ++ +G+ + + +K DDI+
Sbjct: 429 ASGYHLLLKTYVAAGKLAPDMRKRLKEDDIE 459
>gi|225453344|ref|XP_002270492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02150
[Vitis vinifera]
Length = 527
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 157/423 (37%), Positives = 247/423 (58%), Gaps = 8/423 (1%)
Query: 32 KPVAR-NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQ 90
+P+ + N +Y RIS + +P++ VL+QW EG+++++ EL RV+++LR KRFK AL+
Sbjct: 52 RPLVKWNAVYRRISLMENPEMGSASVLNQWENEGKRLTKWELCRVVKELRKFKRFKMALE 111
Query: 91 VSEWMSGQGLAF--SVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYV 148
V EWM+ +G F S D A+QLDLI KV G+ SAE YF+ L D K ++YGALLN YV
Sbjct: 112 VYEWMNNRGERFRLSSSDAAIQLDLIAKVCGVSSAEDYFSRLPDTLKDKRIYGALLNAYV 171
Query: 149 REGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNF 208
+ + D++ L++K++ G + L +N +M LY N + +K+ ++ +M + D +
Sbjct: 172 QAKMRDKAEILIEKLRNKGYATTPLPFNVMMTLYMNLKELDKVQSMISEMMNKNIQLDIY 231
Query: 209 SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKK 268
SY I ++S + ME V ++M+ + I+ +W T+ST+A YI G EKA LKK
Sbjct: 232 SYNIWLSSCESTER---MEQVFEQMKLERTINPNWTTFSTMATMYIKLGQFEKAEECLKK 288
Query: 269 CEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIG 328
E ++ ++D + Y++LIS Y S GNK E+ + W + K K N Y ++ SLV++G
Sbjct: 289 VESRIT-NRDRMPYHYLISLYGSTGNKAEVYRAWNIYKSKFPNIPNLGYHALISSLVRVG 347
Query: 329 ELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWS 388
+LE AEK+ EEW YD R+ N++L Y ++G +EKA+ L +++ G P +W
Sbjct: 348 DLEGAEKIYEEWLSVKSSYDPRIGNLLLGCYVKEGFLEKAEGFLDHMIEAGGKPNSTTWE 407
Query: 389 IIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVS 448
I+A G + A C K A+ N W+PKP VS+ LD + D EA +
Sbjct: 408 ILAEGNTGVKKISDALSCFKRAVLAEGSNG-WKPKPVNVSAFLDLCEEEADTATKEALMG 466
Query: 449 SLK 451
L+
Sbjct: 467 LLR 469
>gi|224119780|ref|XP_002331159.1| predicted protein [Populus trichocarpa]
gi|118487894|gb|ABK95769.1| unknown [Populus trichocarpa]
gi|222873242|gb|EEF10373.1| predicted protein [Populus trichocarpa]
Length = 490
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 140/452 (30%), Positives = 259/452 (57%), Gaps = 4/452 (0%)
Query: 39 LYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQ 98
LY R+ G +VS+ L+Q++ +++ + E+ I++LRSR + A+++SE MS +
Sbjct: 25 LYVRLFKEGSSEVSVRQQLNQFLKSSKRVFKWEVGDTIKKLRSRNLYYPAVKLSETMSSR 84
Query: 99 GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLS 158
G+ +V D A+ LDL+ K RG+ +AE YF L + K + YGALLNCY +E + +E+ +
Sbjct: 85 GMNKTVSDQAIHLDLVAKTRGIPAAENYFIDLPETSKNLRTYGALLNCYCKELMTEEAEA 144
Query: 159 LMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYG 218
L++KMKE+ S+++YN +M LYT GQ E+IP ++ +MK + V PD+++Y + + +
Sbjct: 145 LIEKMKELNLGLSSMSYNSLMTLYTKVGQPERIPAIIQEMKADNVMPDSYTYNVWMRALA 204
Query: 219 ARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKD 278
A +++S +E V++EM+ ++ +W TYS +A+ Y+ AG +KA LK+ E I + +KD
Sbjct: 205 AVNDISGVERVIEEMKRDGRVAANWTTYSNLASIYVDAGYFDKAEKALKELEKI-NANKD 263
Query: 279 ALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLE 338
+ LI+ Y G E+ + W ++ K N Y+ M+ LV + ++ AEK
Sbjct: 264 LFAFQFLITLYGRTGKLIEVYRIWRSLRLAFPKTANISYLNMIQVLVNLKDVPGAEKCFR 323
Query: 339 EWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKN 398
EWE C YD RV N+++ Y+++G+++KA+ + + ++G P +W I Y
Sbjct: 324 EWESGCSTYDIRVANVVISAYAKEGLVDKAEELKERARRRGAKPNSKTWEIFCDYYLKNG 383
Query: 399 NMEKAFECMKEALAVHEEN-KFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQ-- 455
+++ +C+ A++ N + W P P +V S++ +DV+ E + LK V
Sbjct: 384 DVKLGVDCIANAVSAGRGNGQKWVPSPVIVGSLMAHFEQQKDVDGAEDLIEILKKAVDDV 443
Query: 456 KRNMYHALTEAHIRSGQEVDGLLESMKADDID 487
++ +L + +G++ + +K ++++
Sbjct: 444 AVEVFESLIRTYAAAGRKSQLMRRRLKMENVE 475
>gi|224063635|ref|XP_002301239.1| predicted protein [Populus trichocarpa]
gi|222842965|gb|EEE80512.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 150/435 (34%), Positives = 256/435 (58%), Gaps = 5/435 (1%)
Query: 32 KPVAR-NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQ 90
+P+ + N +Y RIS + +P++ VL+QW +G+++++ EL RV+++LR KR++ AL+
Sbjct: 63 RPMMKWNAIYRRISLMENPELGSGSVLNQWENDGKRLTKWELCRVVKELRKYKRYQQALE 122
Query: 91 VSEWMSGQGLAF--SVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYV 148
V +WM+ + F S D A+QLDLI KVRG+ SAE +F L + K ++YGALLN YV
Sbjct: 123 VYDWMNNRQERFGLSPSDAAIQLDLIAKVRGVSSAEDFFLRLPNTFKDRRIYGALLNAYV 182
Query: 149 REGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNF 208
R + +++ SL+ +M+ AL YN +M LY N +++K+ ++ +M E + D +
Sbjct: 183 RNRMREKAESLIDEMRGKDYVTHALPYNVMMTLYMNINEYDKVDLIISEMNEKNIKLDIY 242
Query: 209 SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKK 268
SY I ++S G + ME V ++M+S I+ +W T+ST+A YI G EKA L++
Sbjct: 243 SYNIWLSSCGLQGSADKMEQVFEQMKSDGSINPNWTTFSTMATMYIKMGKFEKAEDCLRR 302
Query: 269 CEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIG 328
E ++ +D + Y++L+S Y ++GNK+E+ + W + K N Y M+ SLV++
Sbjct: 303 VESRIT-GRDRIPYHYLLSLYGNVGNKEEVYRVWNIYKSIFPSIPNLGYHAMISSLVRMD 361
Query: 329 ELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWS 388
++E AEK+ EEW YD R+ N+ + + +G ++KA++ ++++G P +SW
Sbjct: 362 DIEGAEKIYEEWLSIKTSYDPRIANLFMAAFVYQGNLDKAESFFDHMLEEGGKPNSHSWE 421
Query: 389 IIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVS 448
I+A G+ + +A C+KEA A +K W+P P+ VSS + D+ EA S
Sbjct: 422 ILAQGHISERRTSEALSCLKEAFAT-PGSKSWKPNPANVSSFFKLCEEEVDMASKEALAS 480
Query: 449 SLKIKVQKRNMYHAL 463
L+ ++ +AL
Sbjct: 481 FLRQSGHLKDKAYAL 495
>gi|147819856|emb|CAN71816.1| hypothetical protein VITISV_023421 [Vitis vinifera]
Length = 494
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 149/452 (32%), Positives = 250/452 (55%), Gaps = 4/452 (0%)
Query: 38 NLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSG 97
+LY ++S L + + LD+WV EG+ + ++ + QLR K++KHA Q+ EWM
Sbjct: 30 SLYWKLSALRGTEGDVAETLDKWVKEGKSVKRFDMISCVNQLRRFKKYKHAAQIYEWMEK 89
Query: 98 QGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESL 157
+ D A+++DL+ K G+ AE YFNSL + K +K YGALLNCY +E +VD+++
Sbjct: 90 SKNDLNNADRAIRIDLLAKTEGIAQAENYFNSLQESAKTNKTYGALLNCYCKENMVDKAV 149
Query: 158 SLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSY 217
L +K+KE+ SAL+YN ++ LY GQ EK+P ++ +M+E +P D ++Y + +NSY
Sbjct: 150 ELFKKLKELNFVSSALSYNNMISLYLRVGQPEKVPSLVHEMEEKDIPADLYTYNLLMNSY 209
Query: 218 GARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSK 277
+ + ++E VL++M+ + + DW TY +AN Y+ AG +KA L+K E
Sbjct: 210 ASVKDFEAVEQVLEKMKKRG-VERDWFTYGNLANIYVDAGHTKKANYALQKLEQ-NKNLH 267
Query: 278 DALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKML 337
D + LI+ YA N + + + W K+ K N+ Y+ ML +L K+G++ EK
Sbjct: 268 DPEAFRMLINLYARTSNLEGVNRAWESLKLAHPKINNKSYLIMLLALSKLGDVAGLEKCF 327
Query: 338 EEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADK 397
+EWE C YD R+ N++L Y + MIE+A+ + + I K+G + + Y K
Sbjct: 328 KEWESGCSTYDVRLSNVMLESYLNREMIEEANLLSESIAKRGPELKLKTLDLFMKFYLKK 387
Query: 398 NNMEKAFECMK-EALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL-KIKVQ 455
+ ++ A + + A EN W P ++ L++ + +DV+ E F ++ KI
Sbjct: 388 HQLDLAMKYLDMGASKADPENNKWFPTEETITMFLEYFEEVKDVDSAEKFCETMRKISRL 447
Query: 456 KRNMYHALTEAHIRSGQEVDGLLESMKADDID 487
+Y +L +I +G+E + E MK D I+
Sbjct: 448 DSKIYDSLLRTYIAAGKEEPLMSERMKDDGIE 479
>gi|449432307|ref|XP_004133941.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Cucumis sativus]
gi|449525818|ref|XP_004169913.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Cucumis sativus]
Length = 537
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 148/417 (35%), Positives = 240/417 (57%), Gaps = 4/417 (0%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
N +Y RIS + +P++ VL+QW EG+ I++ EL RV+++LR KRF+ AL++ +WMS
Sbjct: 70 NAIYRRISLMENPELGSASVLNQWENEGKNITKWELSRVVKELRKYKRFERALEIYDWMS 129
Query: 97 GQGLAF--SVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVD 154
+ F + D A+QLDLI KVRG++SAE YF L + K ++YGALLN Y + +
Sbjct: 130 NREERFRLTTSDAAIQLDLISKVRGIKSAEEYFLRLPNHLKDRRIYGALLNAYAKGRQRE 189
Query: 155 ESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICI 214
++ +L++KM+ G L +N +M LY N ++EK+ ++ +M EN + D +SY I +
Sbjct: 190 KAENLLEKMRTKGFTTHPLPFNVMMTLYMNVKEYEKVESLVSEMTENSIQLDIYSYNIWL 249
Query: 215 NSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVS 274
+S G + ME V ++M+ I+ +W T+ST+A YI GL EKA L++ E +
Sbjct: 250 SSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLMEKAEECLRRVESRIV 309
Query: 275 KSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
+D + Y++LIS Y S+GNK+EM + W + K N Y ++ +L+++G++E AE
Sbjct: 310 -GRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALIRVGDVEGAE 368
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGY 394
K+ EEW YD R+ N+ + Y ++G KA++ +V+ G P ++W I+ +
Sbjct: 369 KIYEEWLTVKSTYDPRIANLFIGWYVKEGNTSKAESFFDHMVEVGGKPNSSTWEILVDRH 428
Query: 395 ADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK 451
+ + A KEA + E +K WRPKP V + D D+ E V L+
Sbjct: 429 TKEGRVSDALASWKEAFSA-EGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLVGLLR 484
>gi|357140786|ref|XP_003571944.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Brachypodium distachyon]
Length = 497
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 156/457 (34%), Positives = 259/457 (56%), Gaps = 8/457 (1%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVL-EGQKISELELQRVIRQLRSRKRFKHALQVSEWM 95
++LY R++ + P + LTPVL+QW E + + + ELQ +I++L +RF HAL++S WM
Sbjct: 35 DSLYHRVAAVAIPRLQLTPVLEQWAFAEDRPVEKHELQAIIKKLIRLRRFSHALEMSMWM 94
Query: 96 SGQG-LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVD 154
+ + D A +L+LI KV GL+SA YF L+ E K + YG+LL CY V+
Sbjct: 95 TDRRYFPLKPGDVAYRLELISKVHGLKSAVEYFGGLSKEIKKSQCYGSLLKCYAEAKFVE 154
Query: 155 ESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICI 214
E+ +M+EMG S+ YN +M LY TGQ EK+ + M+E+G+ PD F+ I +
Sbjct: 155 EAEKFFGEMQEMGMM-SSYPYNVMMKLYWETGQVEKVRTMYRAMEESGIKPDLFTIDILL 213
Query: 215 NSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVS 274
Y A +L +E VL++ + + ++ + W +Y+ VA+ ++ AGL+ KA+ L++ E +
Sbjct: 214 TVYKASGDLEGIEEVLEKAKPRENL-VGWHSYAIVASAFMKAGLQGKALQALQESEKRID 272
Query: 275 KSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
+ Y L+S A G + E+ + W + K K N Y+ + +L+K+ + +EAE
Sbjct: 273 PKNGRVAYGFLLSMCADSGMRSEVDRIWDVYKSKVP-TCNSMYMCRISALLKMNDTDEAE 331
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGY 394
K EWE +DFR+ N++L GY +G++EKA+A++ E + KG+ P N+W +AAG+
Sbjct: 332 KAFREWESRFVHHDFRLINLLLNGYCAEGLMEKAEALVDEAITKGRMPYANTWYKLAAGF 391
Query: 395 ADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKV 454
+ KA + ++ALA W P + V LD + ++VE E S L+ V
Sbjct: 392 FKDGQVLKAVDLTRKALA--SATSGWEPDLTNVLMSLDHFMEQKNVEAAEEMASLLRSLV 449
Query: 455 Q-KRNMYHALTEAHIRSGQEVDGLLESMKADDIDEDK 490
R++YH+L + ++ +G V LL+ M D + D+
Sbjct: 450 PLTRDVYHSLLKTYVHAGMPVSDLLDRMNEDGFEADQ 486
>gi|242039187|ref|XP_002466988.1| hypothetical protein SORBIDRAFT_01g017960 [Sorghum bicolor]
gi|241920842|gb|EER93986.1| hypothetical protein SORBIDRAFT_01g017960 [Sorghum bicolor]
Length = 510
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 150/457 (32%), Positives = 255/457 (55%), Gaps = 8/457 (1%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
+NLY RI +G P + L+PVL QW EG + + +Q ++++L +RF HAL++S WM+
Sbjct: 43 DNLYRRIMNVGRPSIPLSPVLKQWDQEGHTVKKFVIQAIVKKLVGLRRFAHALELSFWMT 102
Query: 97 G-QGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDE 155
+ L + D A +LDLI KV GLE A YF + ++ + YG+LL CYV VD+
Sbjct: 103 DRRHLHLTAGDVAYRLDLISKVHGLEKAVEYFGMVPKRLRMPQCYGSLLKCYVEAKAVDK 162
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
+ KM+EMG S+ Y +M LY TGQ E++ + DM+E GV PD FS +
Sbjct: 163 AEEHFAKMQEMG-MKSSYTYTSMMKLYLETGQLERVHAMFQDMEEKGVKPDTFSVESMLA 221
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK 275
+Y A ++ + VL + + + W + A+ ++ +G++ +A++ L + E +S
Sbjct: 222 AYIAAEDVEGVGKVLDKANPHEKL-VKWHGQALAASLFMKSGMQVRAVMALLEAERRISP 280
Query: 276 SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEK 335
+ Y L+ Y LG E+ + W + K K N Y++ + +L+K+ +++ AE
Sbjct: 281 KSSRIAYAFLLKTYTDLGMYPEVGRIWSVYKSKVPPS-NTMYLSRISALLKMNDIDGAEA 339
Query: 336 MLEEWE-LSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGY 394
L+EWE +S +DFR+ N+++ Y ++G++EKA A++ + +KKG+TP N+W +A G+
Sbjct: 340 TLKEWETVSLRYHDFRLINLMVDAYCREGLVEKAVALVDDAIKKGRTPYANTWYKLAGGF 399
Query: 395 ADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL-KIK 453
+ KA + ++AL W+P + V L+ + +DVE E S L K+
Sbjct: 400 FKTGEVSKAVDMTRKAL--ESATPPWKPDLTNVLMSLEHFMNQKDVEAAEEIASMLQKLG 457
Query: 454 VQKRNMYHALTEAHIRSGQEVDGLLESMKADDIDEDK 490
+ +YH L + ++R+G+ V LLE MK D ++ D+
Sbjct: 458 PLTKEVYHCLLKTYVRAGKPVSDLLERMKKDGLEADE 494
>gi|15219808|ref|NP_176276.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097554|sp|O22714.1|PPR86_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g60770
gi|2462744|gb|AAB71963.1| Hypothetical protein [Arabidopsis thaliana]
gi|27754491|gb|AAO22693.1| unknown protein [Arabidopsis thaliana]
gi|28393975|gb|AAO42395.1| unknown protein [Arabidopsis thaliana]
gi|332195609|gb|AEE33730.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 491
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 138/462 (29%), Positives = 258/462 (55%), Gaps = 4/462 (0%)
Query: 29 RAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHA 88
R+ K LY+R+ G +V + L+Q++ + + + E+ I++LR+R + A
Sbjct: 15 RSTKKYIEEPLYNRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTIKKLRNRGLYYPA 74
Query: 89 LQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYV 148
L++SE M +G+ +V D A+ LDL+ K R + + E YF L + K + YG+LLNCY
Sbjct: 75 LKLSEVMEERGMNKTVSDQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSLLNCYC 134
Query: 149 REGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNF 208
+E L +++ L+ KMKE+ S+++YN +M LYT TG+ EK+P ++ ++K V PD++
Sbjct: 135 KELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSY 194
Query: 209 SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKK 268
+Y + + + A +++S +E V++EM ++ DW TYS +A+ Y+ AGL +KA L++
Sbjct: 195 TYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQE 254
Query: 269 CEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIG 328
E + + +D Y LI+ Y LG E+ + W ++ K N Y+ M+ LVK+
Sbjct: 255 LE-MKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLN 313
Query: 329 ELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWS 388
+L AE + +EW+ +C YD R+ N+++ Y+Q+G+I+KA+ + ++ ++G +W
Sbjct: 314 DLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWE 373
Query: 389 IIAAGYADKNNMEKAFECMKEALAVHE-ENKFWRPKPSLVSSILDWLGDNRDVEEVEAFV 447
I Y +M +A ECM +A+++ + + W P P V +++ + +DV E +
Sbjct: 374 IFMDYYVKSGDMARALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQKKDVNGAENLL 433
Query: 448 SSLKIKVQK--RNMYHALTEAHIRSGQEVDGLLESMKADDID 487
LK ++ L + +G+ + +K ++++
Sbjct: 434 EILKNGTDNIGAEIFEPLIRTYAAAGKSHPAMRRRLKMENVE 475
>gi|22165052|gb|AAM93669.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432900|gb|AAP54476.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125575303|gb|EAZ16587.1| hypothetical protein OsJ_32059 [Oryza sativa Japonica Group]
Length = 545
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 151/458 (32%), Positives = 265/458 (57%), Gaps = 8/458 (1%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVL-EGQKISELELQRVIRQLRSRKRFKHALQVSEWM 95
++L+ R++ DP + L+PVL+QW L E + I++ E+Q +I+ L R+RF ALQ+S WM
Sbjct: 81 DSLFRRVAAAADPRLPLSPVLEQWCLAEERPIAKPEIQSIIKYLCRRRRFSQALQLSMWM 140
Query: 96 SGQ-GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVD 154
+ + L S D A +L+LI KV GL+ A YF+S+ D+ K + YG+LL CY V+
Sbjct: 141 TERLHLHLSPGDVAYRLELITKVHGLDRAVEYFDSMPDQLKQQQCYGSLLKCYAEAKCVE 200
Query: 155 ESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICI 214
++ L +KM+ MG S+ YN +M LY GQ E++ + M+E+G+ D F+ +
Sbjct: 201 KAEELFEKMRGMG-MASSYAYNVMMRLYLQDGQVERVHSMHRTMEESGIVADVFTTDTLV 259
Query: 215 NSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVS 274
+Y ++ ++E VL++ ++ + + M W +Y+T+ + +G++E+A+ ++ E ++
Sbjct: 260 AAYVVAEDIEAIEKVLEKADTCNDL-MTWHSYATIGKVLMQSGMEERALQAFQESEKKIA 318
Query: 275 KSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQ-LNRDYITMLGSLVKIGELEEA 333
K + + Y L++ YA LG E+ + W + K K N Y+ + L+K+ ++ A
Sbjct: 319 KKSNRVAYGFLLTMYADLGMNSEVDRIWDVYKSKVPASACNSMYMCRISVLLKMNDIVGA 378
Query: 334 EKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAG 393
EK EEWE +D R+ N++L Y ++G++EKA+A++ + VKKG+TP N+W +A G
Sbjct: 379 EKAYEEWESKHVYHDSRLINLLLTAYCKEGLMEKAEALVDQFVKKGRTPFGNTWYKLAGG 438
Query: 394 YADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL-KI 452
Y KA + K+ALA W P + V L++ + ++VE E S L ++
Sbjct: 439 YFKVGQASKAADLTKKALASGSNE--WTPDLTNVLMSLNYFAEQKNVEAAEEMASLLQRL 496
Query: 453 KVQKRNMYHALTEAHIRSGQEVDGLLESMKADDIDEDK 490
R++YH L + ++ +G+ V LL+ MK D ++ D+
Sbjct: 497 ITPTRDIYHGLLKTYVNAGKPVSDLLDRMKKDGMEADE 534
>gi|22329290|ref|NP_171717.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806400|sp|Q8LPS6.2|PPR3_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g02150
gi|2317908|gb|AAC24372.1| Unknown protein [Arabidopsis thaliana]
gi|332189272|gb|AEE27393.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 524
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 147/423 (34%), Positives = 247/423 (58%), Gaps = 5/423 (1%)
Query: 32 KPVAR-NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQ 90
+P+ + N +Y +IS + P++ VL+QW G+K+++ EL RV+++LR KR AL+
Sbjct: 61 RPIVQWNAIYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALE 120
Query: 91 VSEWMSGQGLAF--SVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYV 148
V +WM+ +G F S D A+QLDLIGKVRG+ AE +F L + K ++YG+LLN YV
Sbjct: 121 VYDWMNNRGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYV 180
Query: 149 REGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNF 208
R +++ +L+ M++ G L +N +M LY N +++K+ ++ +MK+ + D +
Sbjct: 181 RAKSREKAEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIY 240
Query: 209 SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKK 268
SY I ++S G+ + ME V Q+M+S I +W T+ST+A YI G EKA L+K
Sbjct: 241 SYNIWLSSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRK 300
Query: 269 CEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIG 328
E ++ ++ + Y++L+S Y SLGNK E+ + W + K N Y ++ SLV++G
Sbjct: 301 VEARIT-GRNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMG 359
Query: 329 ELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWS 388
++E AEK+ EEW YD R+PN+++ Y + +E A+ + +V+ G P+ ++W
Sbjct: 360 DIEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWE 419
Query: 389 IIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVS 448
I+A G+ K + +A C++ A + E + WRPK ++S + DV EA +
Sbjct: 420 ILAVGHTRKRCISEALTCLRNAFSA-EGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLE 478
Query: 449 SLK 451
L+
Sbjct: 479 LLR 481
>gi|225450579|ref|XP_002277733.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial [Vitis vinifera]
gi|296089781|emb|CBI39600.3| unnamed protein product [Vitis vinifera]
Length = 498
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 149/466 (31%), Positives = 252/466 (54%), Gaps = 4/466 (0%)
Query: 24 FTRAYRAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRK 83
F+ A +LY ++S L + + LD+WV EG+ + ++ + QLR K
Sbjct: 20 FSTATATAAKDKEASLYWKLSALRGTEGDVAETLDKWVKEGKSVKRFDMISCVNQLRRFK 79
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGAL 143
++KHA Q+ EWM + D A+++DL+ K G+ AE YFNSL + K +K YGAL
Sbjct: 80 KYKHAAQIYEWMEKSKNDLNNADRAIRIDLLAKTEGIAQAENYFNSLQESAKTNKTYGAL 139
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
LNCY +E ++D+++ L +K+KE+ SAL+YN ++ LY GQ EK+P ++ +M+E +
Sbjct: 140 LNCYCKENMLDKAVELFKKLKELNFVSSALSYNNMISLYLRVGQPEKVPSLVHEMEEKDI 199
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAI 263
P D ++Y + +NSY + + ++E VL +M+ + + DW TY +AN Y+ AG +KA
Sbjct: 200 PADLYTYNLLMNSYASVKDFEAVEQVLDKMKKRG-VERDWFTYGNLANIYVDAGHTKKAN 258
Query: 264 IYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGS 323
L+K E D + LI+ YA N + + + W K+ K N+ Y+ ML +
Sbjct: 259 YALQKLEQ-NKNLHDPEAFRMLINLYARTSNLEGVNRAWESLKLAHPKINNKSYLIMLLA 317
Query: 324 LVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPT 383
L K+G++ EK +EWE C YD R+ N++L Y + +IE+A+ + + I K+G
Sbjct: 318 LSKLGDVAGLEKCFKEWESGCSTYDVRLSNVMLESYLNREIIEEANLLSESIAKRGPELK 377
Query: 384 PNSWSIIAAGYADKNNMEKAFECMK-EALAVHEENKFWRPKPSLVSSILDWLGDNRDVEE 442
+ + Y K+ ++ A + + A EN W P ++ L++ + +DV+
Sbjct: 378 LKTLDLFMKFYLKKHQLDLAMKYLDMGASKADPENNKWFPTEETITMFLEYFEEVKDVDS 437
Query: 443 VEAFVSSL-KIKVQKRNMYHALTEAHIRSGQEVDGLLESMKADDID 487
E F ++ KI +Y +L +I +G+E + E MK D I+
Sbjct: 438 AEKFCETMRKISRLDSKIYDSLLRTYIAAGKEEPLMSERMKDDGIE 483
>gi|297837423|ref|XP_002886593.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332434|gb|EFH62852.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 491
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 139/462 (30%), Positives = 256/462 (55%), Gaps = 4/462 (0%)
Query: 29 RAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHA 88
R+ K LY R+ G +V + L+Q++ + + + E+ I++LR+R + A
Sbjct: 15 RSTKKYIEEPLYHRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTIKKLRNRGLYYPA 74
Query: 89 LQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYV 148
L++SE M +G+ +V D A+ LDL+ K RG+ + E YF L + K + YG+LLNCY
Sbjct: 75 LKLSEVMEERGMNKTVSDQAIHLDLVAKARGITAGENYFVDLPETSKTELTYGSLLNCYC 134
Query: 149 REGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNF 208
+E L +++ L+ KMKE+ S+++YN +M LYT TGQ EK+P ++ ++K V PD++
Sbjct: 135 KELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGQTEKVPAMIQELKAENVMPDSY 194
Query: 209 SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKK 268
+Y + + + A +++S +E V++EM ++ DW TYS +A+ Y+ AGL +KA L++
Sbjct: 195 TYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQE 254
Query: 269 CEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIG 328
E + + +D Y LI+ Y LG E+ + W ++ K N Y+ M+ LVK+
Sbjct: 255 LE-MKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAMPKTSNVAYLNMIQVLVKLN 313
Query: 329 ELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWS 388
+L AE + +EW+ +C YD R+ N+++ Y+++G+IEKA + ++ ++G +W
Sbjct: 314 DLPGAETLFKEWQANCSTYDIRIVNVLIGAYAKEGLIEKAKELKEKAPRRGGKANAKTWE 373
Query: 389 IIAAGYADKNNMEKAFECMKEALAVHE-ENKFWRPKPSLVSSILDWLGDNRDVEEVEAFV 447
I Y +M A ECM +A+++ + + W P V +++ + +DV E +
Sbjct: 374 IFMDYYVKSGDMAHALECMSKAVSIGKGDGGKWIPSQETVRTLMSYFEQKKDVNGAENLL 433
Query: 448 SSLKIKVQK--RNMYHALTEAHIRSGQEVDGLLESMKADDID 487
LK ++ +L + +G+ + +K ++++
Sbjct: 434 EILKNGTDNIGAEIFESLIRTYAAAGKSHPAMRRRLKMENVE 475
>gi|20453085|gb|AAM19786.1| At1g02150/T7I23.8 [Arabidopsis thaliana]
gi|29028736|gb|AAO64747.1| At1g02150/T7I23.8 [Arabidopsis thaliana]
Length = 524
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 146/423 (34%), Positives = 247/423 (58%), Gaps = 5/423 (1%)
Query: 32 KPVAR-NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQ 90
+P+ + N +Y +IS + P++ VL+QW G+K+++ EL RV+++LR KR A++
Sbjct: 61 RPIVQWNAIYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQAIE 120
Query: 91 VSEWMSGQGLAF--SVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYV 148
V +WM+ +G F S D A+QLDLIGKVRG+ AE +F L + K ++YG+LLN YV
Sbjct: 121 VYDWMNNRGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYV 180
Query: 149 REGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNF 208
R +++ +L+ M++ G L +N +M LY N +++K+ ++ +MK+ + D +
Sbjct: 181 RAKSREKAEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIY 240
Query: 209 SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKK 268
SY I ++S G+ + ME V Q+M+S I +W T+ST+A YI G EKA L+K
Sbjct: 241 SYNIWLSSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRK 300
Query: 269 CEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIG 328
E ++ ++ + Y++L+S Y SLGNK E+ + W + K N Y ++ SLV++G
Sbjct: 301 VEARIT-GRNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMG 359
Query: 329 ELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWS 388
++E AEK+ EEW YD R+PN+++ Y + +E A+ + +V+ G P+ ++W
Sbjct: 360 DIEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWE 419
Query: 389 IIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVS 448
I+A G+ K + +A C++ A + E + WRPK ++S + DV EA +
Sbjct: 420 ILAVGHTRKRCISEALTCLRNAFSA-EGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLE 478
Query: 449 SLK 451
L+
Sbjct: 479 LLR 481
>gi|297848282|ref|XP_002892022.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337864|gb|EFH68281.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 523
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 146/423 (34%), Positives = 250/423 (59%), Gaps = 5/423 (1%)
Query: 32 KPVAR-NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQ 90
+P+ + N +Y +IS + P++ VL+QW G+K+++ EL RV+++LR KR AL+
Sbjct: 60 RPIVQWNAIYKKISLMEKPELGAASVLNQWEKGGRKLTKWELCRVVKELRKYKRPNQALE 119
Query: 91 VSEWMSGQGLAF--SVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYV 148
V +WM+ +G F S D A+QLDLIGKVRG+ AE +F +L + K ++YG+LLN YV
Sbjct: 120 VYDWMNNRGERFRLSASDAAIQLDLIGKVRGISDAEQFFLTLPENFKDRRVYGSLLNAYV 179
Query: 149 REGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNF 208
R +++ +L+ M++ G L +N +M LY N +++K+ ++ +MK+ + D +
Sbjct: 180 RAKSREKAEALLHTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIY 239
Query: 209 SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKK 268
SY I ++S G+ + ME V Q+M+S I+ +W T+ST+A YI G EKA L+K
Sbjct: 240 SYNIWLSSCGSLGSVEKMELVYQQMKSDVSINPNWTTFSTMATMYIKMGETEKAEDALRK 299
Query: 269 CEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIG 328
E ++ ++ + Y++L+S Y S+GNK E+ + W + K N Y ++ SL ++G
Sbjct: 300 VEARIT-GRNRIPYHYLLSLYGSVGNKKELYRVWNVYKSVVPSIPNLGYHALVSSLARMG 358
Query: 329 ELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWS 388
++E AEK+ EEW YD R+PN+++ Y + +EKA+ + +V+ G P+ ++W
Sbjct: 359 DIEGAEKVYEEWLPVKSSYDPRIPNLLMNVYVKNDQLEKAEGLFDHMVEMGGKPSSSTWE 418
Query: 389 IIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVS 448
I+A G+ K + +A C+++A + E + WRPK ++S + DV EA +
Sbjct: 419 ILADGHTRKRCIPEALTCLRKAFSA-EGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLE 477
Query: 449 SLK 451
L+
Sbjct: 478 LLR 480
>gi|297743994|emb|CBI36964.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 144/422 (34%), Positives = 240/422 (56%), Gaps = 2/422 (0%)
Query: 30 AVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHAL 89
A + V + LY R+S LG S+ L++ + EG+ I++ EL I+QLR ++F+HAL
Sbjct: 76 ASRSVRQPRLYHRLSALGATGGSVADTLNEHIKEGKLIAKHELSSCIKQLRKYRQFQHAL 135
Query: 90 QVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVR 149
++ +WM + + FS D+AV+LDL+ K +GL +AE YFN+L+ K YG LLNCY +
Sbjct: 136 EIMDWMENRKIFFSYADYAVRLDLLSKTKGLATAEEYFNNLSPSAKNLLTYGTLLNCYCK 195
Query: 150 EGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFS 209
E + +++L+L +KM E+ ++L +N +M L+ G+ E +P ++ +MK+ + PD F+
Sbjct: 196 EKMEEKALALFEKMDELNFASTSLTFNNLMSLHMRLGKPEMVPPLVDEMKKRSISPDTFT 255
Query: 210 YRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC 269
Y I + SY +++ E VL+E++ ++ + W TYS +A Y+ A L EKA + LKK
Sbjct: 256 YNILMQSYARLNDIEGAERVLEEIKRENEDKLSWTTYSNLAAVYVNARLFEKAELALKKL 315
Query: 270 EDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGE 329
E+ + D L Y+ LIS YA + N E+ + W K K N Y ML +L + +
Sbjct: 316 EEEMG-FHDRLAYHFLISLYAGINNLSEVNRVWNSLKSAFPKTNNMSYFIMLQALANLND 374
Query: 330 LEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSI 389
++ + EEW+ SC+ +D R+ N+ + + MI+ A+++L E VK+ P + +
Sbjct: 375 VDGLKICFEEWKSSCFSFDVRLANVAVRAFLGWDMIKDAESILYEAVKRSSGPFYTALDM 434
Query: 390 IAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSS 449
A + ++ A + M EA A +N W+P P V + L + + +DVE E F
Sbjct: 435 FMAHHLKVREIDTALKYM-EAAASEVKNNEWQPAPERVLAFLKYFEEEKDVEGAEKFCKI 493
Query: 450 LK 451
LK
Sbjct: 494 LK 495
>gi|297734632|emb|CBI16683.3| unnamed protein product [Vitis vinifera]
Length = 423
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 151/406 (37%), Positives = 236/406 (58%), Gaps = 7/406 (1%)
Query: 48 DPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAF--SVH 105
+P++ VL+QW EG+++++ EL RV+++LR KRFK AL+V EWM+ +G F S
Sbjct: 3 NPEMGSASVLNQWENEGKRLTKWELCRVVKELRKFKRFKMALEVYEWMNNRGERFRLSSS 62
Query: 106 DHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKE 165
D A+QLDLI KV G+ SAE YF+ L D K ++YGALLN YV+ + D++ L++K++
Sbjct: 63 DAAIQLDLIAKVCGVSSAEDYFSRLPDTLKDKRIYGALLNAYVQAKMRDKAEILIEKLRN 122
Query: 166 MGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSS 225
G + L +N +M LY N + +K+ ++ +M + D +SY I ++S +
Sbjct: 123 KGYATTPLPFNVMMTLYMNLKELDKVQSMISEMMNKNIQLDIYSYNIWLSSCESTER--- 179
Query: 226 MENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHL 285
ME V ++M+ + I+ +W T+ST+A YI G EKA LKK E ++ ++D + Y++L
Sbjct: 180 MEQVFEQMKLERTINPNWTTFSTMATMYIKLGQFEKAEECLKKVESRIT-NRDRMPYHYL 238
Query: 286 ISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCY 345
IS Y S GNK E+ + W + K K N Y ++ SLV++G+LE AEK+ EEW
Sbjct: 239 ISLYGSTGNKAEVYRAWNIYKSKFPNIPNLGYHALISSLVRVGDLEGAEKIYEEWLSVKS 298
Query: 346 CYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
YD R+ N++L Y ++G +EKA+ L +++ G P +W I+A G + A
Sbjct: 299 SYDPRIGNLLLGCYVKEGFLEKAEGFLDHMIEAGGKPNSTTWEILAEGNTGVKKISDALS 358
Query: 406 CMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK 451
C K A+ N W+PKP VS+ LD + D EA + L+
Sbjct: 359 CFKRAVLAEGSNG-WKPKPVNVSAFLDLCEEEADTATKEALMGLLR 403
>gi|195613552|gb|ACG28606.1| tetratricopeptide-like helical [Zea mays]
gi|414870858|tpg|DAA49415.1| TPA: tetratricopeptide-like helical [Zea mays]
Length = 517
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 152/457 (33%), Positives = 252/457 (55%), Gaps = 8/457 (1%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
+ LY RI +G P + L+PVL+QW EG + +Q ++++L +RF HAL++S WM+
Sbjct: 40 DELYRRIMNVGRPSIPLSPVLEQWNQEGHTAKKFVIQAIVKKLVGLRRFAHALELSFWMT 99
Query: 97 GQ-GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDE 155
+ L SV D A +LDLI KV GLE A YF + + + + YG+LL CYV VD+
Sbjct: 100 DRRHLHLSVGDVAYRLDLISKVHGLEKAVEYFGMVPKQLRKPQCYGSLLKCYVEAKAVDK 159
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
+ KM+EMG S+ Y +M LY TGQ E++ + DM+E GV PD FS +
Sbjct: 160 AEEHFAKMQEMG-MTSSYAYTWMMKLYLQTGQLERVHAMFQDMEEKGVKPDTFSVEAMLA 218
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK 275
+Y A ++ + VL + + + W +++ A+ ++ +G++ A++ L + E +S
Sbjct: 219 AYIAAEDVQGVGKVLDKANPHEKL-VTWHGHASAASLFMKSGMQVGAVMALVEAERRISP 277
Query: 276 SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEK 335
+ Y L+ Y LG E + W + K K N Y++ L +L++ +++ AE
Sbjct: 278 KSSRIAYAFLLKTYTELGMHAEAGRIWSVYKSKVPP-CNTMYMSRLSALLRTNDIDGAEA 336
Query: 336 MLEEWELSCYCY-DFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGY 394
L+EWE Y DFR+ N+++ Y ++G++EKA A++ +KKG+TP N+W +A G+
Sbjct: 337 TLKEWETVPLRYHDFRLINVMVDAYCREGLVEKAVALVDGAIKKGRTPYANTWYKLAGGF 396
Query: 395 ADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL-KIK 453
+ +A + ++AL WRP + V L+ D +DV E VS+L K+
Sbjct: 397 FKTGQVPEAVDMTRKAL--DSATPPWRPDLANVLMSLNHFVDQKDVGAAEEMVSTLQKLV 454
Query: 454 VQKRNMYHALTEAHIRSGQEVDGLLESMKADDIDEDK 490
R++YH L + ++R+G+ LLE MK D ++ D+
Sbjct: 455 PLTRDVYHCLLKTYVRAGKPPSDLLERMKEDGLEADE 491
>gi|224137116|ref|XP_002327026.1| predicted protein [Populus trichocarpa]
gi|222835341|gb|EEE73776.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 142/417 (34%), Positives = 245/417 (58%), Gaps = 4/417 (0%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
N +Y RIS + +P++ VL++W EG+++++ EL RV+++LR KR++ AL+V +WM
Sbjct: 69 NGIYRRISLMENPELGSGSVLNRWENEGKRLTKWELCRVVKELRKYKRYQQALEVYDWMK 128
Query: 97 GQGLAF--SVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVD 154
+ F S D A+QLDLI KVRG+ +AE +F SL + K ++YGALLN YV+ + +
Sbjct: 129 NRQERFRLSPSDAAIQLDLIAKVRGVSTAEDFFLSLPNTFKDRRVYGALLNAYVQNRMRE 188
Query: 155 ESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICI 214
++ +L +M++ G AL +N M LY N +++K+ ++ +M E + D +SY I +
Sbjct: 189 KAETLFDEMRDKGYVTHALPFNVTMTLYMNIKEYDKVDLMISEMNEKNIKLDIYSYNIWL 248
Query: 215 NSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVS 274
+S G++ ME V ++M+S I+ +W T+ST+A YI G EKA L++ E ++
Sbjct: 249 SSCGSQGSADKMEQVYEQMKSDRSINPNWTTFSTMATMYIKMGQFEKAEDCLRRVESRIT 308
Query: 275 KSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
+D + Y++L+S Y ++GNK+E+ + W + K N Y ++ SLV++ ++E AE
Sbjct: 309 -GRDRIPYHYLLSLYGNVGNKEEVYRVWNIYKSIFPSIPNLGYHAIISSLVRLDDIEGAE 367
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGY 394
K+ EEW YD R+ N+ + Y +G +++A + +++ G P N+W I+A G+
Sbjct: 368 KIYEEWLSIKTSYDPRIANLFIAAYVYQGNLDEAKSFFDHMLEDGGKPNSNTWEILAQGH 427
Query: 395 ADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK 451
+ +A C+KEA V +K W+P P+ V+S + D+ EA L+
Sbjct: 428 ISERRTSEALSCLKEAF-VTPGSKSWKPNPANVTSFFKLCEEEADMANKEALEGFLR 483
>gi|147766620|emb|CAN73943.1| hypothetical protein VITISV_032243 [Vitis vinifera]
Length = 448
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 144/429 (33%), Positives = 246/429 (57%), Gaps = 20/429 (4%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
++LY RI + DP S++P+L+QW+ EGQ +S+ +LQ ++R ++ +RF HAL++S+WM+
Sbjct: 22 SSLYDRIQAVRDPKASISPLLNQWIEEGQTVSKPQLQSLVRIMKDFRRFHHALEISQWMT 81
Query: 97 GQG-LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDE 155
+ + D A++LDLI V + YGALL+ YVRE V++
Sbjct: 82 DRRYFTLTPSDAAIRLDLISMVPWTXAGX-------------DAYGALLSGYVREKSVEK 128
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
+ + MQKM+EM S+ YN ++ LY+ TG H KI ++ +M+ +P D F+ +
Sbjct: 129 AEATMQKMREMDFATSSFPYNMLINLYSQTGNHGKIEALIQEMQXKAIPCDAFTVXNLMV 188
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK 275
+Y A S++S+ME L ME HIS+DW YS A+ Y+ GL +KA+ LKK E
Sbjct: 189 AYVAASDISAMEKXLNRMEEDPHISVDWNIYSVAASGYLKVGLIDKALEMLKKIESNRPH 248
Query: 276 SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEK 335
+ + L+S YA +K E+ + W L K + Y M+ L K+ ++E AEK
Sbjct: 249 LERXSAFKXLLSLYARTXHKQELYRVWNL--YKPSYEYPEAYSCMITCLTKLDDIEGAEK 306
Query: 336 MLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYA 395
+ +EWE C YDFRV N +L Y ++ + +KA++++ +++++ + P ++W+I+A GY
Sbjct: 307 IFQEWECECTMYDFRVLNRLLSAYCKRCLFDKAESLVNKVIEE-RMPYASTWNILAKGYV 365
Query: 396 DKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK-IKV 454
+ M KA E +K+A++V K WRP ++ + +++L ++EE+E K + +
Sbjct: 366 EDKQMPKAVEMLKKAISVG--RKGWRPNSIILDACIEYLEGQGNLEEIEEIARLCKNLGI 423
Query: 455 QKRNMYHAL 463
+++H L
Sbjct: 424 PDGDIHHRL 432
>gi|115436132|ref|NP_001042824.1| Os01g0301700 [Oryza sativa Japonica Group]
gi|14495231|dbj|BAB60950.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113532355|dbj|BAF04738.1| Os01g0301700 [Oryza sativa Japonica Group]
gi|125525550|gb|EAY73664.1| hypothetical protein OsI_01547 [Oryza sativa Indica Group]
gi|125570062|gb|EAZ11577.1| hypothetical protein OsJ_01442 [Oryza sativa Japonica Group]
gi|215713519|dbj|BAG94656.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 504
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 154/454 (33%), Positives = 254/454 (55%), Gaps = 8/454 (1%)
Query: 35 ARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEW 94
AR LY+R+S P + L +W+ E + +SE ++ +R+ R K+ KHALQ+ +W
Sbjct: 39 ARWALYARLSA-HLPSGGMVEELGRWLRERRPLSEEQVLFCVRRFRKFKQNKHALQLMDW 97
Query: 95 MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVD 154
M +G+ + HA++LDL+ K+ G+ +AE YF SL D + + Y LLNCY + +
Sbjct: 98 MEARGVNLELKHHALRLDLVSKLNGIHAAEEYFGSLPDIFRSKQTYSTLLNCYAEHRMAE 157
Query: 155 ESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICI 214
+ L L + MK M L YN +MCLY T Q EKIP ++ M+E+G+ P+ FSY +
Sbjct: 158 KGLELYENMKAMNIVSDILVYNNLMCLYLKTDQPEKIPTTVVKMQESGIQPNKFSYFVLT 217
Query: 215 NSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVS 274
SY +++ S E VL+E++ + S+ W Y+T+AN Y +KA LKK E+++
Sbjct: 218 ESYIMMNDIESAEKVLKELQEVN--SVPWSLYATLANGYNKLQQFDKAEFTLKKAEEVLD 275
Query: 275 KSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
K D ++ L+SHYA+ GN E+ + W K KK NR Y+ ML +L K+ + + +
Sbjct: 276 KH-DVFSWHCLLSHYANSGNLSEVKRIWESLKSAFKKCTNRSYLVMLKALKKLDDFDTLQ 334
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGY 394
++ +EWE S YD ++PNII+ Y KGM++KA+A+ + + + + ++ I A Y
Sbjct: 335 QIFQEWESSHEHYDMKIPNIIIQAYLDKGMVDKAEAMRQTTMAQDHS-NYRTFCIFAEFY 393
Query: 395 ADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK-IK 453
+K+ M +A + K+A + + + W P+ LV+ L D++DV+ +E F LK +
Sbjct: 394 LEKSKMNEALQVWKDAKKM-VKGQDWVPE-KLVNRYLKHFEDSKDVDGMETFCECLKNLG 451
Query: 454 VQKRNMYHALTEAHIRSGQEVDGLLESMKADDID 487
Y AL +I G+ + + M+ D +D
Sbjct: 452 RLDAEAYEALIRTYISVGRTNPSIPQRMEVDRVD 485
>gi|395146485|gb|AFN53641.1| pentatricopeptide repeat-containing protein [Linum usitatissimum]
Length = 516
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 147/460 (31%), Positives = 246/460 (53%), Gaps = 9/460 (1%)
Query: 39 LYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQ 98
LY R+S LG ++ VL+ +V++G I ++EL R +++LR RF H L++ EWM +
Sbjct: 46 LYRRLSALGATGGTVDKVLNDYVMDGMSIRKVELMRCVKELRKYGRFNHGLEIMEWMEKR 105
Query: 99 GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLS 158
G+ D AV+LDLI K +G+ AE YFN L K YG+LLN Y ++ +++L
Sbjct: 106 GINLGHGDLAVRLDLICKTKGITEAENYFNGLVPSAKNPATYGSLLNSYCKKLDSEKALQ 165
Query: 159 LMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYG 218
L QKM ++ F ++L +N +M +Y GQ EK+P+++ MK+ +PP F+Y I I S G
Sbjct: 166 LFQKMDKLKFFRNSLPFNNLMSMYMRLGQQEKVPELVSQMKQMNLPPCTFTYNIWIQSLG 225
Query: 219 ARSELSSMENVLQEMESQSHI--SMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS 276
+ ++ VL+EM + + + +W TYS +A Y AG E+A + LK E+ + S
Sbjct: 226 HMRDFEGIKKVLEEMRNDVNFGNNFNWTTYSNLAAVYTSAGEFERAKLALKMMEERID-S 284
Query: 277 KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKM 336
D Y+ L++ Y + + +E+ + WG K K + N Y+ ML +L ++ ++E K+
Sbjct: 285 HDRNAYHFLLTLYGGIADLEEVHRVWGCLKAKFNQVTNASYLVMLQALARLKDVEGISKV 344
Query: 337 LEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYAD 396
EEWE C YD RV N+ + Y +KGM +A+AV +++ P + ++
Sbjct: 345 FEEWESVCTSYDMRVANVAIRVYLEKGMYNEAEAVFDGAMERTPGPYFKTREMLMVSLLK 404
Query: 397 KNNMEKAFECMKEALAVHEEN-----KFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK 451
+ +E A + MK A +N K WRP +V++ + + +DVE E LK
Sbjct: 405 RRQLEPALKQMKAAFTEVGQNEKGHEKEWRPSAEIVNAFFGYFEEEKDVEGAEKMWKILK 464
Query: 452 -IKVQKRNMYHALTEAHIRSGQEVDGLLESMKADDIDEDK 490
I +Y L + +I +G+ + + D ++ D+
Sbjct: 465 CINRCDSTVYRLLMKTYIAAGKSAVDMRTRLAEDAVEVDE 504
>gi|255553777|ref|XP_002517929.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542911|gb|EEF44447.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 446
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 152/414 (36%), Positives = 238/414 (57%), Gaps = 9/414 (2%)
Query: 41 SRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQ-G 99
SRI L DP S+ PVLDQWV EG + + L+ ++ ++ RF HALQ+S+WM+ +
Sbjct: 12 SRIVNLKDPKASVIPVLDQWVNEGNTVRKALLRSLVNLMKGFNRFNHALQISQWMADRPN 71
Query: 100 LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSL 159
L S D V+L+L+ ++ G AE YF L D+ K ++Y ALL+ YV+E V ++ ++
Sbjct: 72 LTLSPSDVVVRLELVHRIYGSAHAEKYFEKLPDKFKCREVYCALLSGYVQESSVRKAEAI 131
Query: 160 MQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGA 219
M++M+ G S YN ++ LY G +EKI ++ +M+ NGV ++ + +Y A
Sbjct: 132 MEEMRAKGMANSCFPYNLLINLYPKNGDYEKINMLIQEMETNGVVRGAYTMSNLMAAYVA 191
Query: 220 RSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDA 279
S +S ME +L ++E + DW YS A+ Y+ GL EKA+ L+K ED++ K
Sbjct: 192 ASNISGMERILNQIEKDPQLGNDWRVYSVAASGYLKFGLIEKALTMLRKLEDVMPLEKKT 251
Query: 280 LGYNHLISHYASLGNKDEMMKFWGLQK--IKCKKQLNRDYITMLGSLVKIGELEEAEKML 337
++ L++ Y G +DE+ W K I+ K+ +TM+ SL K+ +++ AEK+
Sbjct: 252 SAFDILVTLYGKTGKRDELYLVWNTYKPLIELKET---SVMTMISSLSKLDDIKGAEKIF 308
Query: 338 EEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADK 397
EWE C YDFRV N +L Y +KG+++KA+A E K +TP +SW I+A GY +
Sbjct: 309 REWESQCMMYDFRVLNTLLFAYCRKGLLKKAEAA-VEKAAKDRTPCASSWGILAMGYIEH 367
Query: 398 NNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK 451
N M KA E +K+AL++ + WRP +++ L++L DVE VE LK
Sbjct: 368 NQMYKAVEMLKKALSISGQG--WRPNSMTLTACLNFLEKQGDVEGVEEVTKLLK 419
>gi|255545872|ref|XP_002513996.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547082|gb|EEF48579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 496
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 152/456 (33%), Positives = 260/456 (57%), Gaps = 5/456 (1%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
+NL ++I L P +++T +L +W+ G K++ +L+ + L KR+KHAL++ WM
Sbjct: 29 SNLKNQIMKLKSPGLNITSILQKWIDNGHKVTVSQLRYINGLLVKSKRYKHALEIFTWME 88
Query: 97 GQ-GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYG-ALLNCYVREGLVD 154
Q SV D+A++L+LI KV G+E AE YFN + + K ALL+ YV+ V
Sbjct: 89 TQKNFRMSVSDYALRLELIIKVNGIEEAEEYFNFIPHDSVTRKAASFALLHGYVKVKDVV 148
Query: 155 ESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICI 214
++ +LM K+ +G + +N +M LY T Q+EK+ V+ MK N + + SY + +
Sbjct: 149 KAEALMMKLYNLGLIVNCYPFNEMMKLYMATSQYEKVALVIDQMKRNKIALNLLSYNLWM 208
Query: 215 NSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVS 274
+SYG S++ +E V +EM + ++ + W T +T+AN Y AG+ +KA++ LK E I+S
Sbjct: 209 SSYGEVSKVVKVELVYKEMVNDDNVEVGWSTLATLANIYTKAGIVDKALLALKNAEKILS 268
Query: 275 KSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
S LGY L++ Y+SL NK+ + + W K + +Y+ +L LVK+G+L EAE
Sbjct: 269 TS-HLLGYFFLMTQYSSLKNKEGVQRLWEACKGVNGRITCANYMCVLSCLVKVGDLLEAE 327
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGY 394
K+ +WEL+C YD RV N++L Y +KG++ KA+++ + +G P + I+ G+
Sbjct: 328 KVFRDWELNCRKYDIRVSNVLLGAYVRKGLMNKAESLHLHTLDRGGCPNYKTLEILMEGW 387
Query: 395 ADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL-KIK 453
M+KA + M +A+++ E+ WRP ++ SI + L NR+ E+ F+ + +
Sbjct: 388 VKSQKMDKAIDAMTQAISM-LEHCHWRPSHGIIMSIAEHLERNRNFEDANHFIQVIHHLG 446
Query: 454 VQKRNMYHALTEAHIRSGQEVDGLLESMKADDIDED 489
V +Y L H+ + + +L+ M+ D I+ D
Sbjct: 447 VASLPLYKVLLRMHLHAQRAAFDILKMMEKDKIELD 482
>gi|15240937|ref|NP_198098.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214236|sp|Q3E911.1|PP400_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27460
gi|332006308|gb|AED93691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 491
Score = 257 bits (657), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 156/459 (33%), Positives = 253/459 (55%), Gaps = 8/459 (1%)
Query: 34 VARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSE 93
VA N I P S+T +L + + G +S EL+ + ++L R+ ALQ+ E
Sbjct: 35 VANRNSLKEILRKNGPRRSVTSLLQERIDSGHAVSLSELRLISKRLIRSNRYDLALQMME 94
Query: 94 WMSGQ-GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED---KVDK-LYGALLNCYV 148
WM Q + FSV+D A++LDLI K GL+ E YF L +V K Y LL YV
Sbjct: 95 WMENQKDIEFSVYDIALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLPLLRAYV 154
Query: 149 REGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNF 208
+ +V E+ +LM+K+ +G + +N +M LY +GQ+EK+ V+ MK N +P +
Sbjct: 155 KNKMVKEAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVL 214
Query: 209 SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKK 268
SY + +N+ S ++++E V +EM + + W + T+AN YI +G EKA + L+
Sbjct: 215 SYNLWMNACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSGFDEKARLVLED 274
Query: 269 CEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIG 328
E ++++S + LGY LI+ YASLGNK+ +++ W + K C + +YI +L SLVK G
Sbjct: 275 AEKMLNRS-NRLGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTG 333
Query: 329 ELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWS 388
+LEEAE++ EWE C+ YD RV N++L Y + G I KA+++ ++++G TP +W
Sbjct: 334 DLEEAERVFSEWEAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPNYKTWE 393
Query: 389 IIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVS 448
I+ G+ NMEKA + M + + WRP ++V +I ++ +EE A+V
Sbjct: 394 ILMEGWVKCENMEKAIDAMHQVFVLMRRCH-WRPSHNIVMAIAEYFEKEEKIEEATAYVR 452
Query: 449 SL-KIKVQKRNMYHALTEAHIRSGQEVDGLLESMKADDI 486
L ++ + +Y L H + + + E MK D +
Sbjct: 453 DLHRLGLASLPLYRLLLRMHEHAKRPAYDIYEMMKLDKL 491
>gi|255571041|ref|XP_002526471.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534146|gb|EEF35862.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 139/397 (35%), Positives = 243/397 (61%), Gaps = 4/397 (1%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
N++Y RIS + P++ VL++ +G+K+++ EL RV+++LR KR K AL+V +WM+
Sbjct: 69 NSVYRRISLMEKPELGAATVLNEMEKDGKKLTKWELCRVVKELRKYKRHKQALEVYDWMN 128
Query: 97 GQGLAF--SVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVD 154
+ F S D A+QLDL+ KVRG+ SAE YF L+D K ++YGALLN YV+ + +
Sbjct: 129 NREERFRLSASDAAIQLDLVAKVRGVSSAEDYFMRLSDNVKDRRVYGALLNSYVKARMRE 188
Query: 155 ESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICI 214
++ SL++KM++ AL +N +M LY N +++K+ ++ +M + D +SY I +
Sbjct: 189 KAESLIEKMRKKDYTTHALPFNVMMTLYMNLKEYDKVDMMISEMMAKNIRLDIYSYNIWL 248
Query: 215 NSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVS 274
+S G++ + ME V ++M+ S I+ +W T+ST+A YI G EKA L++ E ++
Sbjct: 249 SSRGSQGSIERMEEVYEQMKLDSTINPNWTTFSTMATMYIKMGQLEKAEDCLRRVESRIT 308
Query: 275 KSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
+D + Y++L+S Y ++GNK+E+ + W + K N Y ++ SLV++ ++E AE
Sbjct: 309 -GRDRIPYHYLLSLYGNVGNKEEIYRVWNIYKSIFATIPNLGYHAIISSLVRMDDIEGAE 367
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGY 394
K+ EEW YD R+ N+++ Y + G ++KA++ +++ G P ++W I+A G+
Sbjct: 368 KIYEEWLPVKSSYDPRIGNLLMGWYVRGGNLDKAESFFDHMMEVGGKPNSSTWEILADGH 427
Query: 395 ADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSIL 431
+ + +A C KEA + + +K W+PKP ++SS
Sbjct: 428 TREKRISEALSCFKEAF-LAQGSKSWKPKPVIISSFF 463
>gi|359497206|ref|XP_002262853.2| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Vitis vinifera]
Length = 494
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 131/370 (35%), Positives = 229/370 (61%), Gaps = 4/370 (1%)
Query: 83 KRFKHALQVSEWMSGQG-LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYG 141
+R + +S+WMS + + D A++++LI KV GLE E YFN+++ K ++Y
Sbjct: 94 QRLRDLGFISQWMSDKRYIPLMPRDIALRMNLILKVHGLEQVENYFNNIHKNLKTYQVYI 153
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
ALLNCY E VD++ ++MQ+++++G +AL YN +M +Y G EK+ ++ +M+E
Sbjct: 154 ALLNCYALEKSVDKAEAIMQRLRDLGFVRTALGYNTLMNVYYRMGNWEKLDILMHEMEEK 213
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
G+ D F+ I +++Y A S + ++N++ MES I +DW +Y+ VA+ Y+ GL +K
Sbjct: 214 GIFCDKFTLAIRLSAYAAASNIVGIDNIVTRMESDPRIILDWNSYAVVAHGYLKVGLVDK 273
Query: 262 AIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITML 321
++ +KK E+++ + +++L+ YA +DE+ + W L K K +K N+ Y+ M+
Sbjct: 274 TLVMMKKLEELIDAKGSNVAFDNLLKLYAETRQRDELDRVWMLYK-KKEKIYNKGYMAMI 332
Query: 322 GSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKT 381
SL+K +++ AEK+LEEWE YDFRVPN ++ Y +KG+ EKA+A++ +I+ KG
Sbjct: 333 SSLLKFDDIDAAEKVLEEWESRRLSYDFRVPNFLIDAYCRKGLTEKAEALVNKILTKGGN 392
Query: 382 PTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVE 441
P ++W +A GY + + + KA E +K+A+ V N W+P + +++ L++L NRDVE
Sbjct: 393 PLVDTWFYLANGYLEDSQIPKAVEALKKAVVVCPPN--WKPSKNTLATCLEYLEGNRDVE 450
Query: 442 EVEAFVSSLK 451
F+ L+
Sbjct: 451 GAGEFIRFLQ 460
>gi|296083491|emb|CBI23460.3| unnamed protein product [Vitis vinifera]
Length = 444
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 131/378 (34%), Positives = 223/378 (58%), Gaps = 1/378 (0%)
Query: 39 LYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQ 98
LY R+ G +VS+ L+ ++ +++ + E+ +++LR RKRF AL++SE M+ +
Sbjct: 24 LYDRLFKDGSSEVSVRQQLNHFLKSSKRVFKWEVGDTVKKLRDRKRFYPALKLSETMAKR 83
Query: 99 GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLS 158
G+ ++ D A+ LDLI K RG+ +AE YF L + K YGALLNCY +E L +++ +
Sbjct: 84 GMNMTISDQAIYLDLITKTRGVAAAENYFIDLPETSKNHLTYGALLNCYCKELLTEKAEA 143
Query: 159 LMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYG 218
LM++MKE+ S++ YN +M LYT GQ EKIP ++ ++K + PD+++Y I + +
Sbjct: 144 LMERMKELKLGLSSMPYNSLMTLYTKIGQPEKIPTIIQELKSLDIMPDSYTYNIWMRALA 203
Query: 219 ARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKD 278
A +++S +E V++EM+ ++ DW TYS +A+ Y+ AG+ EKA LK+ E + +D
Sbjct: 204 AVNDISGVERVIEEMKRDGRVASDWTTYSNLASIYVDAGVFEKAEKALKELEK-RNACRD 262
Query: 279 ALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLE 338
+ LI+ Y +GN E+ + W ++ K N Y+ M+ LV + +L AEK
Sbjct: 263 LTAFQFLITLYGRIGNLLEVYRVWRSLRLAFPKTANVSYLNMIQVLVNLKDLPGAEKCFR 322
Query: 339 EWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKN 398
EWE C YD RV N ++ Y++ G++EKA+ + + ++G P +W I A +
Sbjct: 323 EWESGCSIYDIRVANALIGAYAKDGLLEKAEELKEHARRRGAKPNAKTWEIFLAYHLKNR 382
Query: 399 NMEKAFECMKEALAVHEE 416
M++A +C+ A++ E
Sbjct: 383 EMKQAVDCVANAISTGVE 400
>gi|356542147|ref|XP_003539532.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Glycine max]
Length = 483
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 141/405 (34%), Positives = 236/405 (58%), Gaps = 6/405 (1%)
Query: 38 NLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSG 97
+L +R+ +GDP + ++P+L QWV EG+++++L+L+ ++ +L +RF HALQV EWMS
Sbjct: 23 SLENRVFKVGDPVIPVSPILKQWVEEGREVTKLQLENLVYRLTQSRRFTHALQVLEWMSN 82
Query: 98 Q-GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDES 156
+ S + A Q++LI KVRGLE AE YF + D K+Y ALL CY V+E+
Sbjct: 83 ERNYELSPGNIAKQINLISKVRGLEQAEKYFRGIPDAKIEFKIYAALLRCYAEHKSVEEA 142
Query: 157 LSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINS 216
++++K+KE+ N ++ LY G++EK+ ++ +MKE + + +Y I +N+
Sbjct: 143 EAVLKKIKELHPVNITACCNMMLELYAKKGKYEKLDRLMQEMKEKDIC-NAGTYTIRLNA 201
Query: 217 YGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS 276
Y +++ ME +L +ME ++DW TY T AN Y EK LKK E +
Sbjct: 202 YVIATDIKGMEKLLMQMEVDPMATVDWYTYMTAANGYRKVHNFEKVAAMLKKSEHVARGK 261
Query: 277 KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKM 336
L Y + + YA +GNKDE+ + W + K+ N+ YI ML SLVK+ +++ AEK+
Sbjct: 262 TKRLAYESIQTMYAIIGNKDEVHRLWNM--CTSPKKPNKSYIRMLSSLVKLDDIDGAEKI 319
Query: 337 LEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYAD 396
LEEWE +D R+PN+++ Y + G +KA+A ++ ++ GK +W +A GY
Sbjct: 320 LEEWESVHENFDVRIPNLMISAYCKWGQFDKAEAYIRRLLDGGKHLDGRTWDRLACGYNA 379
Query: 397 KNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVE 441
N+ME A + MK+A++ + + RP P + + + +L + D++
Sbjct: 380 GNDMENAVQAMKKAVSTNLAGR--RPDPFTLVACVKYLKEKGDLD 422
>gi|125532539|gb|EAY79104.1| hypothetical protein OsI_34210 [Oryza sativa Indica Group]
Length = 513
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 146/459 (31%), Positives = 263/459 (57%), Gaps = 11/459 (2%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVL-EGQKISELELQRVIRQLRSRKRFKHALQVSEWM 95
++L+ R++ DP + L PVL+QW L E +S+ ELQ +++ LR R+RF AL++S WM
Sbjct: 50 DSLFRRVAG-ADPRIPLAPVLEQWWLAEEHPVSKPELQSLVKYLRRRRRFSQALELSMWM 108
Query: 96 S-GQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVD 154
+ + L S D A +L+LI KV GL+ A YF+++ ++ + + YG+LL CY V+
Sbjct: 109 TERRHLHLSPGDVAYRLELISKVHGLDKAVEYFDAVPNQLRELQCYGSLLRCYTEAERVE 168
Query: 155 ESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICI 214
++ L + M+ MG ++ YN +M LY+ GQ E++ + M+E G+ PD F+ +
Sbjct: 169 KAEELFENMRGMG-MANSYAYNAMMNLYSQIGQVERVHSMYKSMEEGGIVPDIFTIDNLV 227
Query: 215 NSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVS 274
++Y ++ ++E VL++ + +S W +++ V ++ AG++E+A+ ++ E ++
Sbjct: 228 SAYADVEDVEAIEKVLEKASCNNLMS--WHSFAIVGKVFMKAGMQERALQAFQESEKRIT 285
Query: 275 KSKDA-LGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQ-LNRDYITMLGSLVKIGELEE 332
KD + Y L++ YA L E+ + W + + K N Y+ + L+K+ ++
Sbjct: 286 ARKDGRVAYGFLLTMYADLQMDSEVDRIWDVYRSKVPASACNTMYMCRISVLLKMNDIVG 345
Query: 333 AEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAA 392
AEK EEWE +D R+ NI+L Y ++G++EKA+A++ + +KKG+TP N+W +A
Sbjct: 346 AEKAYEEWESKHVYHDSRLINILLTAYCKEGLMEKAEALVDQFIKKGRTPFSNTWYKLAG 405
Query: 393 GYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKI 452
GY KA + K+ALA + W+P + V +++ + ++VE E S L+
Sbjct: 406 GYFKVGQASKAADLTKKALA--SASNEWKPDLANVLMSINYFAEQKNVEAAEEMASLLQR 463
Query: 453 KVQ-KRNMYHALTEAHIRSGQEVDGLLESMKADDIDEDK 490
V R++YH L + ++ +G+ LL+ MK D I+ D+
Sbjct: 464 LVPLTRDVYHGLLKTYVNAGEPASDLLDRMKKDGIEADE 502
>gi|302142021|emb|CBI19224.3| unnamed protein product [Vitis vinifera]
Length = 560
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 136/379 (35%), Positives = 223/379 (58%), Gaps = 2/379 (0%)
Query: 36 RNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWM 95
R++L SR+ L P S T VL W+ +G K++ +L+ V RQL KR KHAL++ WM
Sbjct: 37 RDDLTSRMLKLVFPRRSATAVLQNWIDQGHKVTASDLRNVSRQLLKSKRHKHALEILAWM 96
Query: 96 SGQG-LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVD 154
Q S DHA++L+LI K++ L AE YF L + LL+ YV+E ++
Sbjct: 97 EAQNRFQMSAADHAIRLELIIKIQSLAEAEEYFEHLPNSSSRKAACLPLLHAYVKERAIE 156
Query: 155 ESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICI 214
++ +LM K+ ++G S +N +M LY T Q E++P V+L MK+N +P + SY + +
Sbjct: 157 KAEALMLKLNDLGLTVSPHPFNEMMKLYMATSQFERVPTVILQMKQNKIPLNVLSYNLWM 216
Query: 215 NSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVS 274
++ S L+S E V ++M ++ + W T ST+AN Y+ +GL +KA + LK E +S
Sbjct: 217 SACSEVSGLASAEMVYKDMVDDKNVEVGWSTLSTLANIYLKSGLIKKANLALKNAEKKLS 276
Query: 275 KSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
+ + LGY LI+ YASL NK+E+++ W K + + +Y+ +L LVK+G++ EAE
Sbjct: 277 -AHNRLGYFFLITMYASLSNKEEVLRLWEASKKVGGRITSTNYMCILLCLVKLGDIAEAE 335
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGY 394
++ EWE C+ YD RV N++L Y + G ++KA+++ +++G P +W I+ G+
Sbjct: 336 RIFREWESKCWKYDIRVSNVLLGAYMRTGSMDKAESLHLHTLERGGCPNYKTWEILMEGW 395
Query: 395 ADKNNMEKAFECMKEALAV 413
NM+KA MK+ ++
Sbjct: 396 MKSQNMDKAINAMKKGFSI 414
>gi|356526773|ref|XP_003531991.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Glycine max]
Length = 490
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 142/452 (31%), Positives = 251/452 (55%), Gaps = 4/452 (0%)
Query: 39 LYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQ 98
LY ++ G + + L+ +V +++ + E+ +++LR RK ++ AL++SE M+ +
Sbjct: 25 LYMKLFKDGSSQLIVRQSLNNFVKSRKRVYKWEVGDTLKKLRDRKLYQPALKLSETMAKR 84
Query: 99 GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLS 158
+ +V DHA+ LDL+ K RG+ +AE YF SL + K YGALLNCY +E + ++S
Sbjct: 85 NMIKTVSDHAIHLDLLAKARGITAAENYFVSLPEPSKNHLCYGALLNCYCKELMTEKSEG 144
Query: 159 LMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYG 218
LM+KMKE+ S++ YN +M LYT GQ EKIP ++ +MK + V D+++Y + + +
Sbjct: 145 LMEKMKELSLPLSSMPYNSLMTLYTKVGQPEKIPSLIQEMKASNVMLDSYTYNVWMRALA 204
Query: 219 ARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKD 278
A +++S +E V EM+ ++ DW TYS +A+ ++ AGL +KA + LK+ E + KD
Sbjct: 205 AVNDISGVERVHDEMKRGGQVTGDWTTYSNLASIFVDAGLFDKAEVALKELEK-RNAFKD 263
Query: 279 ALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLE 338
Y LI+ Y GN E+ + W ++ K N Y+ M+ LV + +L AEK
Sbjct: 264 LTAYQFLITLYGRTGNLYEVYRVWRSLRLAFPKTANISYLNMIQVLVNLKDLPGAEKCFR 323
Query: 339 EWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKN 398
EWE C YD RV N+++ Y + M+EKA+ + + ++G P + I Y K
Sbjct: 324 EWECGCPTYDIRVANVLIRAYVKLDMLEKAEELKERARRRGAKPNAKTLEIFMDYYLLKG 383
Query: 399 NMEKAFECMKEALAVHEEN-KFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKR 457
+ + A + + EA+++ N + W P ++S ++ +DV+ E F+ LK V+
Sbjct: 384 DFKLAVDYLNEAISMGRGNGEKWVPSSRIISIMMRHFEQEKDVDGAEEFLEILKKSVESP 443
Query: 458 N--MYHALTEAHIRSGQEVDGLLESMKADDID 487
++ +L + +G+ + +K ++++
Sbjct: 444 GVEVFESLIRTYAAAGRISSAMQRRLKMENVE 475
>gi|108862755|gb|ABA99305.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215704853|dbj|BAG94881.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215712260|dbj|BAG94387.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 514
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 140/412 (33%), Positives = 230/412 (55%), Gaps = 7/412 (1%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
+ L R+ L P S VL +W EG+ + + +L RV+R+LR +RFKHAL++ EWM
Sbjct: 43 DTLGRRLLKLIYPKRSAAVVLRRWAEEGRTVQKYQLNRVVRELRKYRRFKHALEICEWMR 102
Query: 97 GQG-LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDE 155
Q + DHAV LDL+ KVRGL SAE +F + + K ALL+ YV+ G D+
Sbjct: 103 TQPEMRLLPGDHAVHLDLVAKVRGLPSAEKFFEDMPERAKGPSTCNALLHAYVQHGRRDK 162
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
+ +++++M + G AL +N +M LY ++G+ EK+P+++ +++ +P D +Y I +
Sbjct: 163 AEAMLEEMAKAGYLTCALPFNHMMSLYMSSGELEKVPEMIKELRRYTIP-DLVTYNIWLT 221
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK 275
++ + + E V M+ + + DW T+S + + YI AGL K L + E S+
Sbjct: 222 YCSKKNSVKAAEKVYDLMKDE-RVVPDWMTFSLLGSIYINAGLHVKGRDALVEMEKRASR 280
Query: 276 SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEK 335
K+ Y+ L++ YASL ++ + + W + +K + +Y ML SL + G++ EAE
Sbjct: 281 -KERAAYSSLLTLYASLSDRGNLDRVWRKMRETFRKFSDTEYKCMLTSLTRFGDIAEAES 339
Query: 336 MLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYA 395
EWE + D R+PN IL Y + GM+EKA+ L IV+KG P+ ++W + GY
Sbjct: 340 FYSEWESASGTRDSRIPNTILAFYIKNGMMEKAEGFLDHIVQKGVKPSYSTWELFVWGYL 399
Query: 396 DKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFV 447
M+K EC+K+AL+ E+ W P P L ++I + + D+E E +
Sbjct: 400 SDGRMDKVLECLKKALSCLEK---WDPNPQLATAIYSQIEEKGDIEAAEKLL 448
>gi|297737393|emb|CBI26594.3| unnamed protein product [Vitis vinifera]
Length = 529
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 154/457 (33%), Positives = 250/457 (54%), Gaps = 8/457 (1%)
Query: 35 ARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEW 94
R+ L R+ L S + +W EG + + EL R++R+LR KR+KHAL++ EW
Sbjct: 54 GRDTLGRRLLSLVYAKRSAVIAIQRWREEGHTVRKYELNRIVRELRKLKRYKHALEICEW 113
Query: 95 MSGQ-GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLV 153
M+ Q + D+AV LDLI K+RGL SAE +F L+D+ K ALL+ YV+ +
Sbjct: 114 MTKQHDIKLLAGDYAVHLDLIAKIRGLASAEKFFEDLSDKMKGQPTCTALLHTYVQNKVS 173
Query: 154 DESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRIC 213
+++ +LM+KM E G L YN ++ LY + GQ EK+P ++ ++K+N PD +Y +
Sbjct: 174 EKAEALMEKMSECGFLKCPLPYNHMISLYISDGQLEKVPGMIQELKKN-TSPDVVTYNLW 232
Query: 214 INSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIV 273
+ +++++ + E VL E++ ++ I DW TYS++ N YI GL +KA L + E
Sbjct: 233 LTVCASQNDVETAEKVLLEIK-KAKIDPDWVTYSSLTNLYIKKGLLDKAATTLNEMEKRT 291
Query: 274 SKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEA 333
S+ K + Y+ LIS + ++ +KD + + W K K + +Y M+ SLVK+GE EEA
Sbjct: 292 SR-KGRIAYSSLISLHTNMQDKDGVHRIWKKLKSIFHKMNDAEYTCMISSLVKLGEFEEA 350
Query: 334 EKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAG 393
E + EW D RVPNI+L Y K +E A+ ++V++G TP+ +W ++ G
Sbjct: 351 ENLYSEWTSVSPTGDSRVPNILLAAYINKNEMEMAEKFYNQMVERGITPSYTTWELLTWG 410
Query: 394 YADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL-KI 452
Y K MEK + ++A+ K W P LV + L + ++E E + L K
Sbjct: 411 YLKKKQMEKVLDYFEKAVG---SVKKWNPDEKLVREVYKNLEEQGNIEGAEKVLVILRKA 467
Query: 453 KVQKRNMYHALTEAHIRSGQEVDGLLESMKADDIDED 489
+Y+ L A+ ++G+ + E MK D ++ D
Sbjct: 468 GHVSTEIYNWLLRAYAKAGKMPLIVAEWMKKDKVEMD 504
>gi|359490027|ref|XP_002279399.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 154/458 (33%), Positives = 251/458 (54%), Gaps = 8/458 (1%)
Query: 35 ARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEW 94
R+ L R+ L S + +W EG + + EL R++R+LR KR+KHAL++ EW
Sbjct: 167 GRDTLGRRLLSLVYAKRSAVIAIQRWREEGHTVRKYELNRIVRELRKLKRYKHALEICEW 226
Query: 95 MSGQ-GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLV 153
M+ Q + D+AV LDLI K+RGL SAE +F L+D+ K ALL+ YV+ +
Sbjct: 227 MTKQHDIKLLAGDYAVHLDLIAKIRGLASAEKFFEDLSDKMKGQPTCTALLHTYVQNKVS 286
Query: 154 DESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRIC 213
+++ +LM+KM E G L YN ++ LY + GQ EK+P ++ ++K+N PD +Y +
Sbjct: 287 EKAEALMEKMSECGFLKCPLPYNHMISLYISDGQLEKVPGMIQELKKN-TSPDVVTYNLW 345
Query: 214 INSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIV 273
+ +++++ + E VL E++ ++ I DW TYS++ N YI GL +KA L + E
Sbjct: 346 LTVCASQNDVETAEKVLLEIK-KAKIDPDWVTYSSLTNLYIKKGLLDKAATTLNEMEKRT 404
Query: 274 SKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEA 333
S+ K + Y+ LIS + ++ +KD + + W K K + +Y M+ SLVK+GE EEA
Sbjct: 405 SR-KGRIAYSSLISLHTNMQDKDGVHRIWKKLKSIFHKMNDAEYTCMISSLVKLGEFEEA 463
Query: 334 EKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAG 393
E + EW D RVPNI+L Y K +E A+ ++V++G TP+ +W ++ G
Sbjct: 464 ENLYSEWTSVSPTGDSRVPNILLAAYINKNEMEMAEKFYNQMVERGITPSYTTWELLTWG 523
Query: 394 YADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL-KI 452
Y K MEK + ++A+ K W P LV + L + ++E E + L K
Sbjct: 524 YLKKKQMEKVLDYFEKAVG---SVKKWNPDEKLVREVYKNLEEQGNIEGAEKVLVILRKA 580
Query: 453 KVQKRNMYHALTEAHIRSGQEVDGLLESMKADDIDEDK 490
+Y+ L A+ ++G+ + E MK D ++ D+
Sbjct: 581 GHVSTEIYNWLLRAYAKAGKMPLIVAEWMKKDKVEMDE 618
>gi|297803972|ref|XP_002869870.1| hypothetical protein ARALYDRAFT_354609 [Arabidopsis lyrata subsp.
lyrata]
gi|297315706|gb|EFH46129.1| hypothetical protein ARALYDRAFT_354609 [Arabidopsis lyrata subsp.
lyrata]
Length = 480
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 140/421 (33%), Positives = 240/421 (57%), Gaps = 5/421 (1%)
Query: 24 FTRAYRAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRK 83
+R Y + + R LY RISPLGDP +S+ PVLD+W EG S+ EL+ +I++L K
Sbjct: 25 LSRGYGS--SMGRFGLYKRISPLGDPKISIVPVLDEWRGEGNYTSKEELRGMIKELIKYK 82
Query: 84 RFKHALQVSEWMSGQ-GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGA 142
RF HAL+VS WMS + S+ D +++LI +V GL AE +F ++ + K ++ +
Sbjct: 83 RFVHALEVSRWMSDRMFFPLSLTDFGTRINLISRVCGLGEAEVFFENIPKDMKGIAVFSS 142
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
LL+CY RE +++ L++ MKE G YN +M +Y H K+ D++L+M++NG
Sbjct: 143 LLSCYAREKSAEKAAKLVEAMKEAGVSMDTRCYNLMMNMYYQMNVHGKLDDLMLEMEQNG 202
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
V D F+ I +++Y A S + +E ++++ S S ++DW YS AN ++ L ++A
Sbjct: 203 VSFDQFTLSIRLSAYAAASNIEGIEKTIEKISSMSETAIDWTIYSAAANAFLKVELIDEA 262
Query: 263 IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLG 322
+ LKKCE+ V++ ++ L+ Y G K+++ + W L+ + +K N Y M+
Sbjct: 263 TMMLKKCEEFVNEDSGNEAFHTLLKLYGETGRKEDLSRVW-LRFKEERKVFNSGYKIMIS 321
Query: 323 SLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTP 382
S +K G++E EK+ +WE YDFR+PN+++ Y +K + EKA+ +LK+ +P
Sbjct: 322 SALKFGDIELVEKVFNQWESEKLSYDFRIPNLLINFYCEKDLTEKAELLLKKAEGNRVSP 381
Query: 383 TPNSWSIIAAGYADKNNMEKAFECMKEALAVH-EENKFWRPKPSLVSSILDWLGDNRDVE 441
+++ +A Y + + + KA E ++ A++ E + + L++S L L N D
Sbjct: 382 PMDAYICLANIYLEGDEISKATEAIERAVSTQIETEQRLEAQRELLNSCLACLRGNGDGR 441
Query: 442 E 442
E
Sbjct: 442 E 442
>gi|147804811|emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]
Length = 1111
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 154/458 (33%), Positives = 251/458 (54%), Gaps = 8/458 (1%)
Query: 35 ARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEW 94
R+ L R+ L S + +W EG + + EL R++R+LR KR+KHAL++ EW
Sbjct: 54 GRDTLGRRLLSLVYAKRSAVIAIQRWREEGHTVRKYELNRIVRELRKLKRYKHALEICEW 113
Query: 95 MSGQ-GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLV 153
M+ Q + D+AV LDLI K+RGL SAE +F L+D+ K ALL+ YV+ +
Sbjct: 114 MTKQHDIKLLAGDYAVHLDLIAKIRGLASAEKFFEDLSDKMKGQPTCTALLHTYVQNKVS 173
Query: 154 DESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRIC 213
+++ +LM+KM E G L YN ++ LY + GQ EK+P ++ ++K+N PD +Y +
Sbjct: 174 EKAEALMEKMSECGFLKCPLPYNHMISLYISDGQLEKVPGMIQELKKN-TSPDVVTYNLW 232
Query: 214 INSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIV 273
+ +++++ + E VL E++ ++ I DW TYS++ N YI GL +KA L + E
Sbjct: 233 LTVCASQNDVETAEKVLLEIK-KAKIDPDWVTYSSLTNLYIKKGLLDKAATTLNEMEKRT 291
Query: 274 SKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEA 333
S+ K + Y+ LIS + ++ +KD + + W K K + +Y M+ SLVK+GE EEA
Sbjct: 292 SR-KGRIAYSSLISLHTNMQDKDGVHRIWKKLKSIFHKMNDAEYTCMISSLVKLGEFEEA 350
Query: 334 EKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAG 393
E + EW D RVPNI+L Y K +E A+ ++V++G TP+ +W ++ G
Sbjct: 351 ENLYSEWTSVSPTGDSRVPNILLAAYINKNEMEMAEKFYNQMVERGITPSYTTWELLTWG 410
Query: 394 YADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL-KI 452
Y K MEK + ++A+ K W P LV + L + ++E E + L K
Sbjct: 411 YLKKKQMEKVLDYFEKAVG---SVKKWNPDEKLVREVYKNLEEQGNIEGAEKVLVILRKA 467
Query: 453 KVQKRNMYHALTEAHIRSGQEVDGLLESMKADDIDEDK 490
+Y+ L A+ ++G+ + E MK D ++ D+
Sbjct: 468 GHVSTEIYNWLLRAYAKAGKMPLIVAEWMKKDKVEMDE 505
Score = 38.5 bits (88), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 91/206 (44%), Gaps = 34/206 (16%)
Query: 277 KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKM 336
+D + +N LIS YA G+ E + + ++ K + + +L + + LEE EK+
Sbjct: 832 RDIVTWNTLISSYAHCGHFAEALSLYDKMVLEDLKPNSATLVXVLSACSHLASLEEGEKV 891
Query: 337 LEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGY-- 394
+ ++ + ++ Y++ G +EK+ +EI +W+++ +GY
Sbjct: 892 HNYINGGKFEFNLSIATALIDMYAKCGQLEKS----REIFNSMHERDVITWNVMISGYGM 947
Query: 395 -ADKNNMEKAFECMKEALA------------------VHEENKF-------WRPKPSL-- 426
D + + F+ M+E+ A + +E K+ + P+L
Sbjct: 948 HGDARSAIEXFQQMEESSAKPNGLTFLAVLSACAHAGLVKEGKYLFGKMQDYSVAPNLKH 1007
Query: 427 VSSILDWLGDNRDVEEVEAFVSSLKI 452
+ ++D LG + +++E EA V S+ I
Sbjct: 1008 YACMVDLLGRSGNLQEAEALVLSMPI 1033
>gi|357131918|ref|XP_003567580.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01990,
mitochondrial-like [Brachypodium distachyon]
Length = 545
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 147/466 (31%), Positives = 257/466 (55%), Gaps = 8/466 (1%)
Query: 27 AYRAVKPVARNN--LYSRISPLGDP-DVSLTPVLDQWVLEGQKISELELQRVIRQLRSRK 83
A A K V +++ LY R+S LG+ + S++ VL++WV EG++ ++L+R +++LR K
Sbjct: 66 AVDANKAVTKDSRPLYRRLSALGNAGEGSVSRVLNKWVREGREARSVDLERYVKELRKYK 125
Query: 84 RFKHALQVSEWM-SGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGA 142
R AL++ +WM +G+ S +HA++LDL+ KVRG+E+AE YFN L D K + YGA
Sbjct: 126 RHAQALELMDWMVHTKGMNMSYTNHAIRLDLVYKVRGIEAAEKYFNGLPDPAKNHRTYGA 185
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
LLNCY +++ L KM ++G S L +N +M LY GQH+K+ + +MK
Sbjct: 186 LLNCYCSSKKEEKATDLFHKMDDLGIASSTLPFNNLMSLYMKLGQHKKVAGLFEEMKAKN 245
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
V PDN + + + SY A +++ ++E VL+EME + + ++ W YST+A+ Y+ AGL EKA
Sbjct: 246 VKPDNLTCCVLMTSYAALNKIDAVEEVLKEME-EKNAALGWSAYSTLASIYVSAGLVEKA 304
Query: 263 IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLG 322
LKK E +V ++ L+S YAS+GN E+ + W + K K N Y +ML
Sbjct: 305 ESALKKLEGLVQPRDGRQPFDFLMSLYASVGNLSEVNRVWDVVKATFPKVTNTSYFSMLQ 364
Query: 323 SLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTP 382
+L K+ + + +++ EEWE + CYD ++ NI+ + + G+ ++A+ + ++ KG
Sbjct: 365 ALYKLNDADRIKQIFEEWESNHECYDVKLTNIMTRAHLKNGLTKEAELLWEKAKAKGADF 424
Query: 383 TPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEE 442
+ + Y +M+ A ++ + K + + + + +DV+
Sbjct: 425 DSKTCELFLDHYMGTEDMKSALHWVENVTKL--PKKAGKLDQEKIQKFSKYFEEQKDVQG 482
Query: 443 VEAFVSSLK-IKVQKRNMYHALTEAHIRSGQEVDGLLESMKADDID 487
E S L+ + +Y +L ++ +G+ L + +K D I+
Sbjct: 483 AEKLCSCLRTLGCIDGKVYESLLRTYLAAGETNHSLRQQIKDDKIE 528
>gi|357165075|ref|XP_003580262.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Brachypodium distachyon]
Length = 513
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 141/416 (33%), Positives = 231/416 (55%), Gaps = 5/416 (1%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
++LY RI+ +G + L W +++ + EL RV R+LR +RF ALQV +WM+
Sbjct: 78 SSLYRRIA-VGHGRRPVGRTLADWDEGERRLDKWELCRVARELRKFRRFNLALQVYDWMT 136
Query: 97 GQGLAFSVH--DHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVD 154
+ FS+ D A+QLDL+ KVRG+ AE YF SL D K + YG+LLN Y + + +
Sbjct: 137 ERRDRFSLSSSDMAIQLDLVAKVRGVPHAEEYFESLPDPLKDKRTYGSLLNVYAQARMKE 196
Query: 155 ESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICI 214
++ ++M++ G L +N +M Y + + +K+ V +MKE V D +Y I I
Sbjct: 197 KTEDTFEQMRKKGYASDTLPFNVLMNFYVDVEEPQKVSAVTDEMKERNVSFDVCTYNIWI 256
Query: 215 NSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVS 274
S+ A + M+ V +M + + +W TY+T+A+ +I G EKA + LK+ E +
Sbjct: 257 KSFAAMKDADGMDRVFNQMIADESVVANWTTYTTLASMHIKLGNFEKAEVCLKEAEKRTT 316
Query: 275 KSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
+D ++ LI+ Y+ L K+E+ + W K N Y +L +LV++G++E AE
Sbjct: 317 -GRDKKCFHFLITLYSYLQKKEEVYRIWNWYKATFSTIHNLGYQEVLSALVRLGDIEGAE 375
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGY 394
+ EEW +D + NI+L YS++G + KA+ L V+KG P PN+W I+A+ Y
Sbjct: 376 LLYEEWASKSSSFDPKTMNILLAWYSREGFVVKAEQTLNRFVEKGGNPKPNTWEILASAY 435
Query: 395 ADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL 450
N + +A CM++A AV ++ WRP+PS V S+L + +N D + + + L
Sbjct: 436 LKDNQLSEALSCMEKAAAVKSASR-WRPRPSNVESLLAYFKENNDTDSADRLMGVL 490
>gi|357142115|ref|XP_003572464.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01990,
mitochondrial-like [Brachypodium distachyon]
Length = 546
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 151/453 (33%), Positives = 247/453 (54%), Gaps = 10/453 (2%)
Query: 39 LYSRIS--PLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
LY+R+S P P L LDQW+ E + +SE +L +R+LRS + +K AL++ +WM
Sbjct: 85 LYTRLSTLPPDAPLGCLAAELDQWLRERRPLSEQQLFSYVRKLRSYRHYKRALELMDWME 144
Query: 97 GQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDES 156
+G + + HAV+L L+ KV GLE+AE YF SL + K K Y +LLNCY D+
Sbjct: 145 ARGASLQLGHHAVRLGLVCKVNGLEAAEEYFWSLPEMFKSIKTYSSLLNCYAEHRKADKG 204
Query: 157 LSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINS 216
L L +KMK M S L YN +M LY T Q EKIP M+EN V D+F+Y + S
Sbjct: 205 LELFEKMKAMNITPSTLVYNNLMDLYLKTDQPEKIPTTFEQMRENHVRTDSFTYYMLTQS 264
Query: 217 YGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS 276
Y ++L S E ++E+E + + W Y+ +AN Y +KA++ LKK E+++ +S
Sbjct: 265 YIMVNDLKSAEKFVEELEKSTPVP--WSLYTVLANNYNKLAQFDKAVLALKKAEEVMDRS 322
Query: 277 KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKM 336
+ + +++L+S YAS GN E+ + W K K +NR Y+ ML +L K+ + + +++
Sbjct: 323 EIS-AWHNLLSLYASSGNSSEVKRVWESLKSAFTKCINRSYLVMLSALKKLDDFDSLQQL 381
Query: 337 LEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYAD 396
+EWE + YD R+ N+++ Y K M ++A+A+ + + KG + ++ I Y +
Sbjct: 382 FQEWESTHERYDMRITNVMIEAYLAKDMTDEAEALRQTAMAKGHSNV-TTFYIFVVSYLE 440
Query: 397 KNNMEKAFECMKEA-LAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL-KIKV 454
K+ +A + ++A V N W P LV+ L + +DV+ +EAF L K+
Sbjct: 441 KSRTSEALDIWRDAEKMVKTPN--WVPPKELVTRFLKHFEEAKDVDGMEAFWEHLKKLGC 498
Query: 455 QKRNMYHALTEAHIRSGQEVDGLLESMKADDID 487
Y AL + +G+ + ++ D ++
Sbjct: 499 LDAEAYGALIRTYAAAGRTNTSISRRIEEDRVE 531
>gi|242076656|ref|XP_002448264.1| hypothetical protein SORBIDRAFT_06g024190 [Sorghum bicolor]
gi|241939447|gb|EES12592.1| hypothetical protein SORBIDRAFT_06g024190 [Sorghum bicolor]
Length = 515
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 142/425 (33%), Positives = 233/425 (54%), Gaps = 5/425 (1%)
Query: 28 YRAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKH 87
Y P+ + LY RI+ +G + L W +++ + EL R+ ++LR +RF
Sbjct: 71 YERRPPLRWSTLYRRIA-VGHGGRPVGRTLGAWDEGERRLDKWELCRIAKELRKFRRFNL 129
Query: 88 ALQVSEWMSGQGLAFSVH--DHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLN 145
ALQV +WM+ + FS+ D A+QLDLI KVRG+ AE YF+ L D K + YG+LLN
Sbjct: 130 ALQVYDWMTERRDRFSLSSSDMAIQLDLIAKVRGVSHAEKYFDELPDAMKDKRTYGSLLN 189
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
Y + + +++ ++M++ G L N +M Y ++G+ ++ ++ +MKE V
Sbjct: 190 VYAQAMMKEKTEDTFEQMRKKGFASDTLPCNVLMNFYVDSGEPNEVLAIIDEMKERNVSF 249
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
D +Y I I S A+ + ME V +M + + +W TY+T+A+ YI G EKA
Sbjct: 250 DVCTYNIWIKSCAAKQDAEEMERVFSQMIADESVVANWTTYTTLASMYIKLGNSEKAEEC 309
Query: 266 LKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLV 325
LK E + ++ +++L++ Y+ LG K+E+ + W K N Y +L +LV
Sbjct: 310 LKDAEKRTT-GREKKCFHYLMTLYSHLGKKEEVYRIWNWYKATFPMIHNLGYQELLSALV 368
Query: 326 KIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPN 385
+IG++E AE + EEW +D + NI+L Y+++G+I KA+ L V+KG P PN
Sbjct: 369 RIGDIEGAELLYEEWASKSSSFDPKTMNILLAWYAKEGLITKAEQTLNRFVEKGGNPKPN 428
Query: 386 SWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEA 445
+W I+A Y + + +A CM++A A+ NK W+P+P+ V S+L + D E +
Sbjct: 429 TWEILATAYMKDDKISEALSCMEKATAIKSANK-WKPRPTNVESLLASFKEKNDAEGADR 487
Query: 446 FVSSL 450
VS L
Sbjct: 488 LVSVL 492
>gi|356547012|ref|XP_003541912.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20710, mitochondrial-like [Glycine max]
Length = 482
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 140/396 (35%), Positives = 229/396 (57%), Gaps = 5/396 (1%)
Query: 47 GDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQ-GLAFSVH 105
GDP S++P+L+QWV EG+++++L+L+ + +L +RF HALQV EWMS + S
Sbjct: 32 GDPLSSVSPILNQWVEEGREVTKLQLEDLAYRLTQSRRFTHALQVLEWMSNERNYELSPG 91
Query: 106 DHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKE 165
A Q++LI KV GLE AE YF + D+ K+Y ALL CY V+E+ ++M+ +KE
Sbjct: 92 SIAKQINLISKVHGLEQAERYFRGIPDDKIEFKIYAALLRCYAEHKSVEEAEAVMKXIKE 151
Query: 166 MGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSS 225
+ N ++ LY G++EK+ ++ +MKE + + +Y I +N+Y +++
Sbjct: 152 LHPVNITPCCNMMLELYAKKGKYEKLDRLMQEMKEKDIC-NASTYTIRLNAYVVVTDIKG 210
Query: 226 MENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHL 285
ME +L +ME+ ++DW TY T AN Y EK LKK E + + L + +
Sbjct: 211 MEKLLMQMEADPVATVDWYTYMTAANGYRRVHNFEKVAEMLKKSEHLARGNTRRLAFESI 270
Query: 286 ISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCY 345
+ YA +GNKDE+ + W + KK N YI ML SL K+ E++ AEK+LEEWE
Sbjct: 271 QTMYAIIGNKDEVYRLWNMC-TSLKKPNNSSYIRMLSSLAKLDEIDGAEKILEEWESKYA 329
Query: 346 CYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
+D R+PN+++ Y + G +KA+A ++ ++ GK +W +A GY N+MEKA +
Sbjct: 330 NFDVRIPNLMISAYCKWGQFDKAEAYIRRLLDGGKQLDGRTWDRLACGYKAGNDMEKAVQ 389
Query: 406 CMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVE 441
MK+A++ + + RP P + + + +L + D++
Sbjct: 390 AMKKAVSKNLGGR--RPDPFTLVACVKYLKEKGDLD 423
>gi|224130976|ref|XP_002320971.1| predicted protein [Populus trichocarpa]
gi|222861744|gb|EEE99286.1| predicted protein [Populus trichocarpa]
Length = 473
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 147/461 (31%), Positives = 248/461 (53%), Gaps = 9/461 (1%)
Query: 31 VKPVA---RNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKH 87
V PV R LY R+S LG S++ L+ +VLEG K ++++L IR+LR RF +
Sbjct: 4 VVPVVLEKRKRLYKRLSELGASGESVSKTLNDFVLEGGKTNKVDLLACIRELRKYGRFDY 63
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCY 147
A++V EWM + + S HAV LDLI K G+ +AE YF+ L+ ++ +GALL+CY
Sbjct: 64 AIEVMEWMQKRKMNVS---HAVYLDLIAKKEGIAAAENYFDGLSPSEQNHSTHGALLSCY 120
Query: 148 VREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDN 207
RE + +++L+L +KM +M ++L +N ++ L+ Q EK+ ++ +MK+ GV P
Sbjct: 121 CRELMSEKALTLFEKMDKMKFLLTSLPFNNLISLHLRLDQPEKVLPIVQEMKQKGVSPCT 180
Query: 208 FSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLK 267
F+Y + + SYG ++ +E VL EM+ + W TY+ +A Y+ AG +KA LK
Sbjct: 181 FTYNMWMQSYGCLNDFEGVERVLDEMKMDGQKNFSWTTYTNLATIYVKAGHFDKAESALK 240
Query: 268 KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKI 327
K E+ + + Y+ LI+ YA N E+ + W K N Y+TML +L K+
Sbjct: 241 KVEEQIERDYRE-AYHFLITLYAGTSNLGEVNRVWNSLKSNFHTTTNVSYLTMLHTLAKL 299
Query: 328 GELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSW 387
++E K +EWE SC+ YD R+ N+ + + M E+A + + +K+ + N+
Sbjct: 300 KDVEGLLKCFKEWESSCHSYDMRLANVAIRACLEHDMYEEAALIFDDALKRTEGLFFNAR 359
Query: 388 SIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFV 447
+ + + ++ A + MK A + +E + W+P+P VS+ + D +DV E
Sbjct: 360 EMFMVFFLKNHQLDLALKHMKAAFSEVKEIE-WQPEPKTVSAFFAYFEDEKDVNGAERLC 418
Query: 448 SSLK-IKVQKRNMYHALTEAHIRSGQEVDGLLESMKADDID 487
LK I N Y L + +I +G+ + + ++ D I+
Sbjct: 419 KILKHINRLDSNAYDLLLKTYIAAGKLAPEMRQRLEEDGIE 459
>gi|115482784|ref|NP_001064985.1| Os10g0501300 [Oryza sativa Japonica Group]
gi|22165054|gb|AAM93671.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432901|gb|AAP54477.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113639594|dbj|BAF26899.1| Os10g0501300 [Oryza sativa Japonica Group]
Length = 513
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 145/459 (31%), Positives = 263/459 (57%), Gaps = 11/459 (2%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVL-EGQKISELELQRVIRQLRSRKRFKHALQVSEWM 95
++L+ R++ DP + L PVL+QW L E + +S+ ELQ +++ LR R RF AL++S WM
Sbjct: 50 DSLFRRVAG-ADPRIPLAPVLEQWWLAEERPVSKPELQSLVKYLRRRCRFSQALELSMWM 108
Query: 96 S-GQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVD 154
+ + L S D A +L+LI KV GL+ A YF+++ ++ + + YG+LL CY V+
Sbjct: 109 TERRHLHLSPGDVAYRLELISKVHGLDKAVEYFDAVPNQLRELQCYGSLLRCYAEAERVE 168
Query: 155 ESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICI 214
++ L + M+ MG ++ YN +M LY+ GQ E++ + M+E G+ PD F+ +
Sbjct: 169 KAEELFENMRGMG-MANSYAYNAMMNLYSQIGQVERVDSMYKAMEEGGIVPDIFTIDNLV 227
Query: 215 NSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVS 274
++Y ++ ++E VL++ + +S W +++ V ++ AG++E+A+ ++ E ++
Sbjct: 228 SAYADVEDVEAIEKVLEKASCNNLMS--WHSFAIVGKVFMKAGMQERALQAFQESEKRIT 285
Query: 275 KSKDA-LGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQ-LNRDYITMLGSLVKIGELEE 332
KD + Y L++ YA L E+ + W + + K N Y+ + L+K+ ++
Sbjct: 286 ARKDGRVAYGFLLTMYADLQMDSEVDRIWDVYRSKVPASACNTMYMCRISVLLKMNDIVG 345
Query: 333 AEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAA 392
AEK EEWE +D R+ NI+L Y ++G++EKA+A++ + +KKG+T N+W +A
Sbjct: 346 AEKAYEEWESKHVYHDSRLINILLTAYCKEGLMEKAEALVDQFIKKGRTLFSNTWYKLAG 405
Query: 393 GYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKI 452
GY + KA + K+ALA + W+P + V +++ + ++VE E S L+
Sbjct: 406 GYFKVGQVSKAADLTKKALA--SASNEWKPDLANVLMSINYFAEQKNVEAAEEMASLLQR 463
Query: 453 KVQ-KRNMYHALTEAHIRSGQEVDGLLESMKADDIDEDK 490
V R++YH L + ++ +G+ LL+ MK D I+ D+
Sbjct: 464 LVPLTRDVYHGLLKTYVNAGEPASDLLDRMKKDGIEADE 502
>gi|125525544|gb|EAY73658.1| hypothetical protein OsI_01545 [Oryza sativa Indica Group]
Length = 522
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 146/457 (31%), Positives = 253/457 (55%), Gaps = 14/457 (3%)
Query: 38 NLYSRISPLGDP-DVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWM- 95
+LY R+S LG + S++ V+++WV EG++ +L + +++LR KR HAL++ EWM
Sbjct: 56 SLYRRLSALGGAGEGSVSRVMNKWVREGREARAADLAKYVKELRKYKRHAHALELMEWMV 115
Query: 96 SGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDE 155
+ +G+ S +HA++LDLI KVRG+E+AE YF L D K K YGALLNCY + D+
Sbjct: 116 NTKGMNMSYTNHAIRLDLIYKVRGIEAAELYFAGLPDPGKNHKTYGALLNCYCSAKMEDK 175
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
+ + +KM E+G S L N +M LY GQH K+ + +MK V PDN + + ++
Sbjct: 176 ATDIYRKMDELGISSSTLPINNLMSLYVKIGQHRKVTSLFEEMKVKNVKPDNLTCCLLMS 235
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK 275
SY A +++ ++ VL+EME + +++ W YST+A+ Y+ A + E+A LKK E ++
Sbjct: 236 SYAALNKIDTVGEVLKEME-EKKVALGWSAYSTLASLYVNANMVEEAESALKKLESLIDV 294
Query: 276 SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEK 335
++ L+S YAS+GN E+ + W L K +K N Y+ ML +L K+ + + ++
Sbjct: 295 QAGRQPFDFLMSLYASVGNLSEVNRVWNLIKANFQKVTNTSYLGMLQALYKLNDDDRMKQ 354
Query: 336 MLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYA 395
+ E+WE + YD R+ N++ + + G+ ++A+ + +++ +KG + + Y
Sbjct: 355 IYEDWESNYENYDARLTNMMTRAHLRNGLTKEAELLWEKVKEKGAEFDSKTCELFLEHYM 414
Query: 396 DKNNMEKAFECMKEALAVHEENKFWRPKPSL----VSSILDWLGDNRDVEEVEAFVSSLK 451
K +M A V K R K L +S L + +++DVE E F++ L+
Sbjct: 415 GKGDMTSALNW------VENMTKLPRKKSKLDQEKISCFLKYFEEHKDVEGAERFLNCLR 468
Query: 452 IK-VQKRNMYHALTEAHIRSGQEVDGLLESMKADDID 487
Y +L ++ +G+ + + +K D I+
Sbjct: 469 TSGCIDGKAYESLLRTYLAAGKTSRSIRQMIKEDKIE 505
>gi|115436124|ref|NP_001042820.1| Os01g0301000 [Oryza sativa Japonica Group]
gi|57899052|dbj|BAD87826.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113532351|dbj|BAF04734.1| Os01g0301000 [Oryza sativa Japonica Group]
gi|215694668|dbj|BAG89859.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215706899|dbj|BAG93359.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 522
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 146/457 (31%), Positives = 253/457 (55%), Gaps = 14/457 (3%)
Query: 38 NLYSRISPLGDP-DVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWM- 95
+LY R+S LG + S++ V+++WV EG++ +L + +++LR KR HAL++ EWM
Sbjct: 56 SLYRRLSALGGAGEGSVSRVMNKWVREGREARAADLAKYVKELRKYKRHAHALELMEWMV 115
Query: 96 SGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDE 155
+ +G+ S +HA++LDLI KVRG+E+AE YF L D K K YGALLNCY + D+
Sbjct: 116 NTKGMNMSYTNHAIRLDLIYKVRGIEAAEQYFAGLPDPGKNHKTYGALLNCYCSAKMEDK 175
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
+ + +KM E+G S L N +M LY GQH K+ + +MK V PDN + + ++
Sbjct: 176 ATDIYRKMDELGISSSTLPINNLMSLYVKIGQHRKVTSLFEEMKVKNVKPDNLTCCLLMS 235
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK 275
SY A +++ ++ VL+EME + +++ W YST+A+ Y+ A + E+A LKK E ++
Sbjct: 236 SYAALNKIDTVGEVLKEME-EKKVALGWSAYSTLASLYVNANMVEEAESALKKLESLIDV 294
Query: 276 SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEK 335
++ L+S YAS+GN E+ + W L K +K N Y+ ML +L K+ + + ++
Sbjct: 295 QAGRQPFDFLMSLYASVGNLSEVNRVWNLIKANFQKVTNTSYLGMLQALYKLNDDDRMKQ 354
Query: 336 MLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYA 395
+ E+WE + YD R+ N++ + + G+ ++A+ + +++ +KG + + Y
Sbjct: 355 IYEDWESNYENYDARLTNMMTRAHLRNGLTKEAELLWEKVKEKGAEFDSKTCELFLEHYM 414
Query: 396 DKNNMEKAFECMKEALAVHEENKFWRPKPSL----VSSILDWLGDNRDVEEVEAFVSSLK 451
K +M A V K R K L +S L + +++DVE E F++ L+
Sbjct: 415 GKGDMTSALNW------VENMTKLPRKKSKLDQEKISCFLKYFEEHKDVEGAERFLNCLR 468
Query: 452 IK-VQKRNMYHALTEAHIRSGQEVDGLLESMKADDID 487
Y +L ++ +G+ + + +K D I+
Sbjct: 469 TSGCIDGKAYESLLRTYLAAGKTSRSIRQMIKEDKIE 505
>gi|224064562|ref|XP_002301516.1| predicted protein [Populus trichocarpa]
gi|222843242|gb|EEE80789.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 142/462 (30%), Positives = 244/462 (52%), Gaps = 14/462 (3%)
Query: 39 LYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQ 98
+Y R+S LG S++ L++ +LEG K S++ L I++LR RF HA++V EWM +
Sbjct: 1 MYRRLSELGASGGSVSKTLNELILEGGKTSKINLTTCIKKLRKYGRFDHAIEVMEWMQKR 60
Query: 99 GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLS 158
+ FS DHAV LDL K +G+ +AE YF++L + Y LLNCY +E + +++L+
Sbjct: 61 KMNFSHVDHAVYLDLTAKTKGIAAAENYFDNLPPSVQNHVTYSTLLNCYCKELMSEKALT 120
Query: 159 LMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYG 218
L +KM +M +++ +N +M L+ GQ EK+ ++ +MK+ GV P F+Y I + SYG
Sbjct: 121 LFEKMDKMKLLSTSMPFNNLMTLHMRLGQPEKVLGIVQEMKQRGVSPGTFTYNIWMQSYG 180
Query: 219 ARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKD 278
++ ++ VL EM++ + W TYS +A Y+ AGL +KA L+K E+ + +D
Sbjct: 181 CLNDFEGVQRVLDEMKTDGKENFSWTTYSNLATIYVKAGLFDKAESALRKLEEQIECGRD 240
Query: 279 A------------LGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVK 326
Y+ LIS YA N E+ + W K + N Y+ +L +L K
Sbjct: 241 CDFQKKRRHDADREAYHFLISLYAGTSNLSEVHRVWNSLKSSFRTTTNISYLNVLQALAK 300
Query: 327 IGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNS 386
+ ++E K +EWE SC+ YD + N+ + + M E+A ++ E +K+ K +
Sbjct: 301 LKDVEGILKCFKEWESSCHSYDMGLANVAIRACLEHDMYEEAASIFDEALKRTKGLFFKA 360
Query: 387 WSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAF 446
+ + + + A + MK A + +E + W+P VS+ L++ D +DV+ E
Sbjct: 361 REMFMVFFLKNHQPDLALKHMKAAFSEAKEIE-WQPDQKTVSAFLNYFEDGKDVDGAERL 419
Query: 447 VSSLK-IKVQKRNMYHALTEAHIRSGQEVDGLLESMKADDID 487
K I N Y L + + +G+ + + ++ D+I+
Sbjct: 420 CKIWKQINRLNSNAYILLLKTYTAAGRLAPEMRQRLEEDNIE 461
>gi|449434959|ref|XP_004135263.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Cucumis sativus]
gi|449478594|ref|XP_004155363.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g60770-like [Cucumis sativus]
Length = 489
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 133/463 (28%), Positives = 258/463 (55%), Gaps = 5/463 (1%)
Query: 27 AYRAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFK 86
A R+ + LY R+ G + S+ L++++ +++ + E+ +R+LR RK +
Sbjct: 15 AKRSAEKYLEEALYIRLFKDGGSEKSVRLQLNKFIKSHKRVFKWEVGDTLRKLRDRKLYY 74
Query: 87 HALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNC 146
AL++SE M+ +G+ +V D A+ LDL+ K RG+++AE YF SL + K Y +LLNC
Sbjct: 75 PALKLSEIMAKRGMNKTVSDQAIHLDLVAKARGIDAAENYFVSLPESSKNHLSYSSLLNC 134
Query: 147 YVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPD 206
Y +E L +++ +L +K+KE+ + + YN +M LY+ G+ +K+ ++ +MK V D
Sbjct: 135 YCKELLTEKAEALFEKIKELNLPVTPVPYNSLMTLYSKIGRPDKVCTIIQEMKAANVTFD 194
Query: 207 NFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYL 266
++Y + + + A +++S +E V+ EM+ + + DW TYS +A+ Y+ A + EKA L
Sbjct: 195 PYTYIVWMRALAALNDISGVERVIDEMK-RDGVKGDWTTYSNLASIYVNANMFEKAAKAL 253
Query: 267 KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVK 326
K E I ++ +D +G+ LI+ Y +G+ E+ + W ++ + N Y+ M+ +L K
Sbjct: 254 KDLEKINTR-RDLIGFQFLITLYGQIGDLTEVYRVWRSLRLAFPRTANISYLNMIQTLTK 312
Query: 327 IGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNS 386
+ +L AEK +EWE YD R+PN ++ Y++ G++EKA A+ + +++G P +
Sbjct: 313 LKDLPGAEKCFKEWESGSPTYDIRIPNALIGAYTKGGLLEKAMALKERALRRGARPNAKT 372
Query: 387 WSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAF 446
W Y + + A +C+ +A+ + K W P P ++ S + +DV+ E+F
Sbjct: 373 WEFFLNYYLKNGDFKLAGDCVAKAIGKGDRGK-WIPSPEIIKSFMSHFEQEKDVDGAESF 431
Query: 447 VSSLKIKVQ--KRNMYHALTEAHIRSGQEVDGLLESMKADDID 487
+ +K V + ++ +L + +G+ + +K ++++
Sbjct: 432 LEIVKKTVDSLESEVFESLIRTYSAAGRTSSSMSRRLKMENVE 474
>gi|293332912|ref|NP_001168310.1| hypothetical protein [Zea mays]
gi|223947377|gb|ACN27772.1| unknown [Zea mays]
gi|414586053|tpg|DAA36624.1| TPA: hypothetical protein ZEAMMB73_688721 [Zea mays]
Length = 513
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 139/425 (32%), Positives = 234/425 (55%), Gaps = 5/425 (1%)
Query: 28 YRAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKH 87
Y P+ LY RI+ +G + L W +++ + EL R+ ++LR +RF
Sbjct: 69 YERRSPLRWGTLYRRIA-VGHGGRPVGRTLGAWDEGERRLDKWELCRIAKELRKFRRFNL 127
Query: 88 ALQVSEWMSGQGLAF--SVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLN 145
ALQV +WM+ + F S D A+QLDLI KVRG+ AE YF+ L D K + YG+LLN
Sbjct: 128 ALQVYDWMTERRDRFPLSSSDMAIQLDLIAKVRGVPHAEKYFDELPDAMKDKRTYGSLLN 187
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
Y + + +++ ++M++ G L N +M Y ++G+ +++ ++ +MKE V
Sbjct: 188 VYAQAMMKEKTEETFEQMRKKGFASDTLPCNVLMNFYVDSGEPDEVLAIIDEMKERNVSF 247
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
D +Y I I S A+ + ME V +M + + +W TY+T+A+ Y+ G EKA
Sbjct: 248 DVCTYNIWIKSCAAKQDAEEMEQVFSQMIADESVVANWTTYTTLASMYLKLGNSEKAEEC 307
Query: 266 LKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLV 325
LK E + ++ +++L++ Y+ LG K+E+ + W K N Y +L +L+
Sbjct: 308 LKDAEKRTT-GREKKCFHYLMTLYSHLGKKEEVYRIWNWYKATFPMIHNLGYQELLSALI 366
Query: 326 KIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPN 385
+IG++E AE + EEW Y +D + NI+L Y+++G+I KA+ + V+KG P PN
Sbjct: 367 RIGDIEGAELLYEEWASKSYSFDPKTMNILLAWYAKEGLITKAEQTVNRFVEKGGNPKPN 426
Query: 386 SWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEA 445
+W I+A Y + + + +A CM++A AV +K W+P+P+ V ++L + D E +
Sbjct: 427 TWEILATAYMNDDKISEALSCMEKATAVKSASK-WKPRPTNVETLLASFKEKNDAEGADR 485
Query: 446 FVSSL 450
VS L
Sbjct: 486 LVSVL 490
>gi|449462348|ref|XP_004148903.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Cucumis sativus]
gi|449491586|ref|XP_004158945.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Cucumis sativus]
Length = 531
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 151/454 (33%), Positives = 254/454 (55%), Gaps = 8/454 (1%)
Query: 35 ARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEW 94
R+ L R+ L P S + +W EG+ + + EL R +R+LR KR+KHAL+V EW
Sbjct: 46 GRDTLGRRLMSLIFPKRSAVTAIRKWQEEGRTVRKYELNRNVRELRKLKRYKHALEVCEW 105
Query: 95 MSGQ-GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLV 153
M+ Q + D+AV LDLI K+RGL AE +F L D+ + + +LL+ YV+ L
Sbjct: 106 MTLQKDMRLVPGDYAVHLDLICKIRGLNRAEKFFEDLPDKIREQSVCTSLLHAYVQNNLS 165
Query: 154 DESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRIC 213
+++ +LM+KM E G S L++N ++ L+ + Q EK+P ++ +K+N PD +Y +
Sbjct: 166 EKAEALMEKMSECGFLKSPLSFNHMLSLHISNKQLEKVPALIEGLKKN-TKPDVVTYNLL 224
Query: 214 INSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIV 273
+N +++ + EN+ EM+ ++ I DW ++ST+AN Y L EKA LK+ E +
Sbjct: 225 LNVCTLQNDTEAAENIFLEMK-KTKIQPDWVSFSTLANLYCKNQLTEKAAATLKEMEKMA 283
Query: 274 SKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEA 333
KS + L + L+S Y +LG+K+E+ + W K +K +R+Y+ M+ SLVK+ ELEEA
Sbjct: 284 FKS-NRLSLSSLLSLYTNLGDKNEVYRIWKKLKSSFRKMSDREYMCMISSLVKLNELEEA 342
Query: 334 EKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAG 393
EK+ EWE D RV N++L Y +K IE+A++ +++KG P+ +W ++ G
Sbjct: 343 EKLYTEWESVSGTRDTRVSNVMLGAYIKKNQIEQAESFYNRMLQKGTVPSYTTWELLTWG 402
Query: 394 YADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK 453
Y +N MEK ++A+ K W LV + L + ++ VE + L+
Sbjct: 403 YLKENQMEKVLHFFRKAV---NRVKKWNADERLVKGVCKKLEEQGNINGVEQLLLILRNA 459
Query: 454 VQ-KRNMYHALTEAHIRSGQEVDGLLESMKADDI 486
+Y++L + ++G+ + E M+ D++
Sbjct: 460 GHVDTEIYNSLLRTYAKAGKMPLIVAERMERDNV 493
>gi|115457716|ref|NP_001052458.1| Os04g0320200 [Oryza sativa Japonica Group]
gi|32490390|emb|CAE04700.1| OSJNBa0041M06.2 [Oryza sativa Japonica Group]
gi|38344779|emb|CAE01505.2| OSJNBb0026L04.10 [Oryza sativa Japonica Group]
gi|113564029|dbj|BAF14372.1| Os04g0320200 [Oryza sativa Japonica Group]
gi|125543501|gb|EAY89640.1| hypothetical protein OsI_11170 [Oryza sativa Indica Group]
gi|125589896|gb|EAZ30246.1| hypothetical protein OsJ_14297 [Oryza sativa Japonica Group]
gi|215767374|dbj|BAG99602.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 524
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 150/502 (29%), Positives = 253/502 (50%), Gaps = 43/502 (8%)
Query: 27 AYRAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFK 86
A R+ K LY R+ G ++ +D ++ ++ + E+ +R+LR + ++
Sbjct: 9 ARRSSKKYVDEALYRRLFRRGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRRLRKQALYR 68
Query: 87 HALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNC 146
AL++SE M+ +G+ +V D A++LDL+ K RG+ +AE YF L + K YGALLNC
Sbjct: 69 PALKLSEVMARRGMNPTVSDQAIRLDLVAKSRGIAAAEKYFLDLPETSKTHLTYGALLNC 128
Query: 147 YVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPD 206
Y ++ + +++ +LM KMKE+ +A+ YN +M LYT QHEK+P V+ DMK + V PD
Sbjct: 129 YCKDLMTEKAEALMGKMKELNFAFTAMCYNSLMTLYTKVNQHEKVPSVIQDMKADDVLPD 188
Query: 207 NFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYL 266
++Y + + + AR ++ +E V++EM+ ++ DW TYS +A+ Y+ AGL EKA L
Sbjct: 189 IYTYNVWMRALAARVDIKGVERVIEEMKRDGRVTPDWTTYSNLASIYVDAGLFEKAEAAL 248
Query: 267 KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVK 326
K+ E + S D Y LI+ YA N E+ + W K ++ N Y+ M+ +L
Sbjct: 249 KELEKW-NTSNDLEAYQFLITLYARTQNLVEVHRVWRSLKRNQPRRANMSYLNMIQALAN 307
Query: 327 IGELEEAEKMLEEW-------------------------------------ELSCYCYDF 349
+ +L AE +EW EL YD
Sbjct: 308 LKDLPGAEACFKEWEAQYINPPKTNTKAPGTAETSSNESDVKATKDKGTDGELKHPKYDI 367
Query: 350 RVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
RV N ++ Y +GM +KA AV K +G +W I Y + +++ C
Sbjct: 368 RVANAMIKAYITEGMFDKAVAVKKRAKMRGGRLNAKTWEIFMEHYLKEGDLKMVHWCADR 427
Query: 410 ALAV-HEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQK---RNMYHALTE 465
A+ H + W P + +++D+ N+DV+ E FV LK KVQK ++ L
Sbjct: 428 AIKKGHSAGRIWVPPHEVTETLMDYFEKNKDVDGAEKFVEVLK-KVQKDLGTVVFEPLVR 486
Query: 466 AHIRSGQEVDGLLESMKADDID 487
+ +G+++ G+ +K ++++
Sbjct: 487 TYAAAGKKLPGMRHRLKIENVE 508
>gi|255647669|gb|ACU24296.1| unknown [Glycine max]
Length = 484
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 139/423 (32%), Positives = 237/423 (56%), Gaps = 6/423 (1%)
Query: 30 AVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHAL 89
A P + NLY +S L +++ LDQ+++EG+ I + EL+R + QLR +RF+HAL
Sbjct: 21 AETPAKKPNLYRMLSALDITGGTVSQTLDQYIMEGKVIKKPELERCVEQLRKYRRFQHAL 80
Query: 90 QVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVR 149
++ EWM + + FS ++AVQLDL+ K +G+++AE +F L K YGALLNCY +
Sbjct: 81 EIIEWMEIRKVNFSWSNYAVQLDLVSKTKGVDAAENFFGGLPPPAKNRYTYGALLNCYCK 140
Query: 150 EGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFS 209
E + D++LS M E+G + + L +N +M L+ G+ +K+P ++ MK+ +P F+
Sbjct: 141 ELMKDKALSHFDTMDELG-YVTNLAFNNVMTLFMKLGEPQKVPQLVELMKKRTIPMSPFT 199
Query: 210 YRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC 269
Y I +NS + ++L E V +EM++++ + W TYS +A+ Y+ EKA + LK
Sbjct: 200 YHIWMNSCASSNDLGGAERVYEEMKTENEGQIGWHTYSNLASIYVKFKDFEKAEMMLKML 259
Query: 270 EDIV-SKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIG 328
E+ V K +DA Y+ L+ YA GN E+ + W K N Y+ ML +L ++
Sbjct: 260 EEQVKPKQRDA--YHCLLGLYAGTGNLGEVHRVWDSLK-SVSPVTNFSYLVMLSTLRRLN 316
Query: 329 ELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWS 388
++E K +EWE SC YD R+ ++ + + + M+E+A+ V +E ++ K P
Sbjct: 317 DMEGLTKCFKEWEASCVSYDARLVSVCVSAHLNQNMLEEAELVFEEASRRSKGPFFRVRE 376
Query: 389 IIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVS 448
+ K+ ++ A ++ AL+ + +K WRP P +V + + + DV+ V+ F
Sbjct: 377 EFMKFFLKKHELDAAVRHLEAALSEVKGDK-WRPSPQVVGAFFKYYEEETDVDGVDEFSK 435
Query: 449 SLK 451
K
Sbjct: 436 IFK 438
>gi|356536682|ref|XP_003536865.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02370, mitochondrial-like [Glycine max]
Length = 593
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 139/422 (32%), Positives = 236/422 (55%), Gaps = 4/422 (0%)
Query: 30 AVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHAL 89
A P + NLY +S L +++ LDQ+++EG+ I + EL+R + QLR +RF+HAL
Sbjct: 21 AETPAKKPNLYRMLSALDITGGTVSQTLDQYIMEGKVIKKPELERCVEQLRKYRRFQHAL 80
Query: 90 QVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVR 149
++ EWM + + FS ++AVQLDL+ K +G+++AE +F L K YGALLNCY +
Sbjct: 81 EIIEWMEIRKVNFSWSNYAVQLDLVSKTKGVDAAENFFGGLPPPAKNRYTYGALLNCYCK 140
Query: 150 EGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFS 209
E + D++LS M E+G + + L +N +M L+ G+ +K+P ++ MK+ +P F+
Sbjct: 141 ELMKDKALSHFDTMDELG-YVTNLAFNNVMTLFMKLGEPQKVPQLVELMKKRTIPMSPFT 199
Query: 210 YRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC 269
Y I +NS + ++L E V +EM++++ + W TYS +A+ Y+ EKA + LK
Sbjct: 200 YHIWMNSCASSNDLGGAERVYEEMKTENEGQIGWHTYSNLASIYVKFKDFEKAEMMLKML 259
Query: 270 EDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGE 329
E+ V K K Y+ L+ YA GN E+ + W K N Y+ ML +L ++ +
Sbjct: 260 EEQV-KPKQRDAYHCLLGLYAGTGNLGEVHRVWDSLK-SVSPVTNFSYLVMLSTLRRLND 317
Query: 330 LEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSI 389
+E K +EWE SC YD R+ ++ + + + M+E+A+ V +E ++ K P
Sbjct: 318 MEGLTKCFKEWEASCVSYDARLVSVCVSAHLNQNMLEEAELVFEEASRRSKGPFFRVREE 377
Query: 390 IAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSS 449
+ K+ ++ A ++ AL+ + +K WRP P +V + L + + DV+ V+
Sbjct: 378 FMKFFLKKHELDAAVRHLEAALSEVKGDK-WRPSPQVVGAFLKYYEEETDVDGVDELSKI 436
Query: 450 LK 451
LK
Sbjct: 437 LK 438
>gi|357442213|ref|XP_003591384.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480432|gb|AES61635.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 143/446 (32%), Positives = 246/446 (55%), Gaps = 12/446 (2%)
Query: 25 TRAYRAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKR 84
T A A P + NLY R++ L +++ L+Q+++EG+ + + EL+R +++LR +R
Sbjct: 78 TAATAAELPNKKANLYRRLADLEKTGGTVSQTLNQYIIEGKALGKDELERCVQELRKYRR 137
Query: 85 FKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALL 144
F HA ++ EWM + + FS ++AV LDL+ KV+G+ AE +FNS K YG+LL
Sbjct: 138 FHHAFEIMEWMMMRQINFSWDNYAVYLDLVSKVKGVVEAENHFNSFPPPAKNKYTYGSLL 197
Query: 145 NCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVP 204
NCY +E ++D++LS KM E G + ++L++ +M +Y Q K+P ++ MKE +
Sbjct: 198 NCYCKELMLDKALSHFDKMDEFG-YLTSLSFTNLMSMYMRLSQPSKVPQLVNVMKERKIR 256
Query: 205 PDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAII 264
F+Y + +NS A ++L +E V +EM+ + +DW TYS +A YI AG EKA +
Sbjct: 257 MTEFTYILWMNSCAALNDLGEVERVYEEMKREDEDKIDWKTYSNLAAIYIKAGFFEKAEL 316
Query: 265 YLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSL 324
LKK E ++ K + Y+ L+S YA GN E+ + WG K K NR Y+ ML +L
Sbjct: 317 MLKKVEGVM-KPRQRETYHFLLSLYAGTGNVKEVYRVWGTLK-KITPVTNRSYLIMLSNL 374
Query: 325 VKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTP 384
++ ++E K+ +EWE YD R+ + + Y + M ++A V +E +K + P
Sbjct: 375 RRLNDMEGIIKLFKEWESRHVSYDSRLVGVAVQAYLSQNMDKEAVLVFEEALKSCRGPFF 434
Query: 385 NSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVE 444
+ A +K ++ A ++ AL+ + K+ +P P +VS+ L + + D++ V+
Sbjct: 435 RIREMFMASLLEKGQLDGAMSHLEAALSEASDYKY-QPSPQVVSAFLKYYEEETDLDGVD 493
Query: 445 AFVSSLKIKVQKRNMYHALTEAHIRS 470
L+ H E++I++
Sbjct: 494 ELSKILRS--------HNFDESYIKT 511
>gi|326493098|dbj|BAJ85010.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510377|dbj|BAJ87405.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 505
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 140/423 (33%), Positives = 232/423 (54%), Gaps = 6/423 (1%)
Query: 32 KPVAR-NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQ 90
+P R ++LY R++ +G + L W +++ + EL R+ R+LR +RF AL+
Sbjct: 62 RPALRWSSLYRRVA-VGHGGRPVGRTLADWDEGERRLDKWELCRIARELRKFRRFNLALE 120
Query: 91 VSEWMSGQGLAFSVH--DHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYV 148
V +WM+ + FS+ D A+QLDLI KVRG+ AE YF L D K + YG+LLN Y
Sbjct: 121 VYDWMTDRRDRFSLSSSDMAIQLDLIAKVRGVPDAEEYFEKLPDPLKDKRTYGSLLNVYA 180
Query: 149 REGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNF 208
+ + +++ ++M++ G L +N +M Y + + EK+ V +MK+ + D
Sbjct: 181 QARMKEKTEYTFEQMRKKGFATDTLPFNVLMNFYVDVAEPEKVSTVTDEMKQRNISFDVC 240
Query: 209 SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKK 268
+Y I I A + +ME VL +M + + +W TY+T+A+ +I EKA LK+
Sbjct: 241 TYNIWIKCCAAMKDADAMERVLNQMTADESVVANWTTYTTLASMHIKLENFEKAEECLKE 300
Query: 269 CEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIG 328
E + +D ++ LI+ Y+ L K+E+ + W K K N Y +L +LV++G
Sbjct: 301 AEKRAT-GRDKKCFHFLITLYSHLQKKEEVYRIWNWYKATFKTIHNLGYQEVLSALVRLG 359
Query: 329 ELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWS 388
++E AE + EEW +D + NI+L YS++G + KA L V+KG P PN+W
Sbjct: 360 DIEGAELLYEEWASKSSSFDPKTMNILLAWYSREGFVVKAQQTLNRFVEKGGNPKPNTWE 419
Query: 389 IIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVS 448
I+A Y N + +A C+++A AV +K WRP+P+ V ++L + + D E V+ +S
Sbjct: 420 ILATAYLKDNQLSEALSCLEKATAVKSASK-WRPRPTNVETLLAYFKEKNDTESVDRLMS 478
Query: 449 SLK 451
L+
Sbjct: 479 VLR 481
>gi|224085447|ref|XP_002307578.1| predicted protein [Populus trichocarpa]
gi|222857027|gb|EEE94574.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 145/440 (32%), Positives = 241/440 (54%), Gaps = 8/440 (1%)
Query: 52 SLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQG-LAFSVHDHAVQ 110
S + +W EG + + EL R++R+LR KR+KHAL+V EWM+ Q + D+AV
Sbjct: 55 SAVITIRKWKEEGHNVRKYELNRIVRELRKLKRYKHALEVCEWMTKQSDIKLVPGDYAVH 114
Query: 111 LDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFG 170
LDLI K+RGL SAE +F + D+ + + ALL+ YV+ + ++ +LM+KM E G
Sbjct: 115 LDLIAKIRGLNSAEKFFEDIPDKMRDYQACSALLHVYVQNKSISKAEALMEKMSECGFLK 174
Query: 171 SALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVL 230
+AL YN ++ +Y GQ EK+ +++ ++K+ PD +Y + + + +++++ + E V
Sbjct: 175 NALPYNHMLSVYVANGQLEKVAEIIQELKKK-TSPDVVTYNMWLTACASQNDVETAEKVF 233
Query: 231 QEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYA 290
E++ +S + DW TYST+ N YI EKA LK+ E SK K+ + Y+ L+S +A
Sbjct: 234 MELK-KSKLDPDWVTYSTLTNLYIKKECLEKAAYTLKEVEKRASK-KNRVTYSSLLSLHA 291
Query: 291 SLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFR 350
++ +KD + + W K K + +Y M+ SLVK+GE AE + EWE D R
Sbjct: 292 NMKDKDGLHRTWNKMKSVFNKMNDAEYNCMISSLVKLGEFGGAENLYNEWESVSATRDSR 351
Query: 351 VPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEA 410
V NI+L Y + +E A+ + +V+KG TP +W ++ G+ MEK E K+A
Sbjct: 352 VSNIVLASYINRNQMEDAENFCQRMVQKGITPCYTTWELLTCGHLKTEQMEKVLENFKKA 411
Query: 411 LAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNM-YHALTEAHIR 469
L + W P L+ I L + D+E E + L+ M Y++L + +
Sbjct: 412 LC---SVRKWTPDKRLIGDIFKNLEERGDIEGAEKLLVILRDAGHVSTMIYNSLLRTYAK 468
Query: 470 SGQEVDGLLESMKADDIDED 489
+G+ + E M+ D+++ D
Sbjct: 469 AGKMPVIIEERMQKDNVELD 488
>gi|116309055|emb|CAH66166.1| H0107B07.5 [Oryza sativa Indica Group]
Length = 524
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 149/502 (29%), Positives = 253/502 (50%), Gaps = 43/502 (8%)
Query: 27 AYRAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFK 86
A R+ K LY R+ G ++ +D ++ ++ + E+ +R+LR + ++
Sbjct: 9 ARRSSKKYVDEALYRRLFRRGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRRLRKQALYR 68
Query: 87 HALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNC 146
AL++SE M+ +G+ +V D A++LDL+ K RG+ +AE YF L + K YGALLNC
Sbjct: 69 PALKLSEVMARRGMNPTVSDQAIRLDLVAKSRGIAAAEKYFLDLPETSKTHLTYGALLNC 128
Query: 147 YVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPD 206
Y ++ + +++ +LM KMKE+ +A+ YN +M LYT QHEK+P V+ DMK + V PD
Sbjct: 129 YCKDLMTEKAEALMGKMKELNFAFTAMCYNSLMTLYTKVNQHEKVPSVIQDMKADDVLPD 188
Query: 207 NFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYL 266
++Y + + + AR ++ +E V++EM+ ++ DW TYS +A+ Y+ AGL EKA L
Sbjct: 189 IYTYNVWMRALAARVDIKGVERVIEEMKRDGRVTPDWTTYSNLASIYVDAGLFEKAEAAL 248
Query: 267 KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVK 326
K+ E + S D Y LI+ YA N E+ + W K ++ N Y+ M+ +L
Sbjct: 249 KELEKW-NTSNDLEAYQFLITLYARTQNLVEVHRVWRSLKRNQPRRANMSYLNMIQALAN 307
Query: 327 IGELEEAEKMLEEW-------------------------------------ELSCYCYDF 349
+ +L AE +EW EL YD
Sbjct: 308 LKDLPGAEACFKEWEAQYINPPKTNTKAPGTAETSSNESDVKATKDKGTDGELKHPKYDI 367
Query: 350 RVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
RV N ++ Y +GM ++A AV K +G +W I Y + +++ C
Sbjct: 368 RVANAMIKEYITEGMFDQAVAVKKRAKMRGGRLNAKTWEIFMEHYLKEGDLKMVHWCADR 427
Query: 410 ALAV-HEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQK---RNMYHALTE 465
A+ H + W P + +++D+ N+DV+ E FV LK KVQK ++ L
Sbjct: 428 AIKKGHSAGRIWVPPHEVTETLMDYFEKNKDVDGAEKFVEVLK-KVQKDLGTVVFEPLVR 486
Query: 466 AHIRSGQEVDGLLESMKADDID 487
+ +G+++ G+ +K ++++
Sbjct: 487 TYAAAGKKLPGMRHRLKIENVE 508
>gi|326498623|dbj|BAK02297.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 505
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 139/423 (32%), Positives = 231/423 (54%), Gaps = 6/423 (1%)
Query: 32 KPVAR-NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQ 90
+P R ++LY R++ +G + L W +++ + EL R+ R+LR +RF AL+
Sbjct: 62 RPALRWSSLYRRVA-VGHGGRPVGRTLADWDEGERRLDKWELCRIARELRKFRRFNLALE 120
Query: 91 VSEWMSGQGLAFSVH--DHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYV 148
V +WM+ + FS+ D A+QLDLI KVRG+ E YF L D K + YG+LLN Y
Sbjct: 121 VYDWMTDRRDRFSLSSSDMAIQLDLIAKVRGVPDTEEYFEKLPDPLKDKRTYGSLLNVYA 180
Query: 149 REGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNF 208
+ + +++ ++M++ G L +N +M Y + + EK+ V +MK+ + D
Sbjct: 181 QARMKEKTEYTFEQMRKKGFATDTLPFNVLMNFYVDVAEPEKVSTVTDEMKQRNISFDVC 240
Query: 209 SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKK 268
+Y I I A + +ME VL +M + + +W TY+T+A+ +I EKA LK+
Sbjct: 241 TYNIWIKCCAAMKDADAMERVLNQMTADESVVANWTTYTTLASMHIKLENFEKAEECLKE 300
Query: 269 CEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIG 328
E + +D ++ LI+ Y+ L K+E+ + W K K N Y +L +LV++G
Sbjct: 301 AEKRAT-GRDKKCFHFLITLYSHLQKKEEVYRIWNWYKATFKTIHNLGYQEVLSALVRLG 359
Query: 329 ELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWS 388
++E AE + EEW +D + NI+L YS++G + KA L V+KG P PN+W
Sbjct: 360 DIEGAELLYEEWASKSSSFDPKTMNILLAWYSREGFVVKAQQTLNRFVEKGGNPKPNTWE 419
Query: 389 IIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVS 448
I+A Y N + +A C+++A AV +K WRP+P+ V ++L + + D E V+ +S
Sbjct: 420 ILATAYLKDNQLSEALSCLEKATAVKSASK-WRPRPTNVETLLAYFKEKNDTESVDRLMS 478
Query: 449 SLK 451
L+
Sbjct: 479 VLR 481
>gi|326531954|dbj|BAK01353.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 518
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 137/437 (31%), Positives = 243/437 (55%), Gaps = 6/437 (1%)
Query: 57 LDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWM-SGQGLAFSVHDHAVQLDLIG 115
+D+W E ++S +LQR + QLR +R+ HAL++ WM S + + DHA +LDLI
Sbjct: 67 IDRWAQERGRVSRPDLQRAVSQLRRARRYGHALEILSWMDSHKEIKLLPLDHAARLDLIA 126
Query: 116 KVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNY 175
KV G AE Y+N L + + LL+CYV E V ++ S M ++ +G ++
Sbjct: 127 KVHGTSQAEEYYNKLPNSASREAASFPLLHCYVAERNVQKAESFMASLQSIGLPVDPHSF 186
Query: 176 NGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMES 235
N +M LY T ++EK+ V+ MK N +P + SY + +N+ S+++S+++V +EM +
Sbjct: 187 NEMMKLYVATCEYEKVFSVIDLMKRNNIPRNALSYNLWMNACSV-SDVTSVQSVFKEMVN 245
Query: 236 QSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNK 295
I + W TY T+AN ++ GL KA L+ E +S ++ LGY+ +++ YA+LG+
Sbjct: 246 DGTIEVGWSTYCTLANIFMKHGLNSKAFACLRTAETKLSTAQR-LGYSFVMTCYAALGDS 304
Query: 296 DEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNII 355
D +M+ W K + + +Y++ + L+K+G+++ AE + WE+ C +D RV N++
Sbjct: 305 DGVMRLWEASKCVPGRIPSANYMSAILCLIKVGDIDRAEWIFGSWEVECRKHDVRVSNVL 364
Query: 356 LLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHE 415
L Y + G IEKA+ + +++KG P +W I+ G+ M+KA MK+AL++
Sbjct: 365 LGAYVRNGWIEKAEKLHLHMLEKGGRPNYKTWEILMEGFVQSRQMDKAVNAMKKALSLM- 423
Query: 416 ENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL-KIKVQKRNMYHALTEAHIRSGQEV 474
+ WRP LV +I + + + ++ ++ L K + +Y ++ A+I++ +
Sbjct: 424 KGCHWRPPLRLVEAIATFFEEQGNTDDANRYIKVLQKFNLTSLPLYKSVLRAYIKADTML 483
Query: 475 DGLLESMKA-DDIDEDK 490
+ M A DDI D+
Sbjct: 484 PTNISEMIARDDIVMDE 500
>gi|326505170|dbj|BAK02972.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 510
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 139/417 (33%), Positives = 231/417 (55%), Gaps = 8/417 (1%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
+ L R+ L P S VL +W EG+ + + +L RV+R+LR +RFKHAL++ EWM
Sbjct: 38 DTLGKRLLKLIYPKRSAVVVLRRWAEEGRAVHKYQLNRVVRELRKYRRFKHALEICEWMR 97
Query: 97 GQG-LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDE 155
Q + DHAV LDL+ KVRGL SAE +F + + K +LL+ YV+ G D+
Sbjct: 98 TQPEIRLLPGDHAVHLDLVAKVRGLASAEKFFEDVPERAKGPSTCNSLLHAYVQHGARDK 157
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
+ +++++M + G AL +N +M LY + G+ EK+P+++ +++ +P D +Y I +
Sbjct: 158 AEAMLKEMADAGYLTCALPFNHMMSLYMSVGELEKVPEMIKELRRYTIP-DLVTYNIWLT 216
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK 275
++ + S E V M+ + DW T+S +A+ YI AGL K L + E S+
Sbjct: 217 YCSRKNSVKSAEKVFDLMKDD-RVVPDWMTFSLLASIYINAGLHVKGRDALVEMEKRASR 275
Query: 276 SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEK 335
K+ Y+ L++ YASL ++ + + W + +K + +Y ML SL + G++ AE
Sbjct: 276 -KERAAYSSLLTMYASLSDRGNLDRVWSKMRQTFRKFSDAEYKCMLTSLTRFGDIAAAEF 334
Query: 336 MLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGY- 394
+ EWE D R+PN IL Y + G +EKA++ L+ IV+KG P+ ++W + GY
Sbjct: 335 VYGEWESQSGTKDSRIPNTILSFYIKNGEMEKAESFLQYIVQKGVKPSYSTWELFVWGYL 394
Query: 395 ADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK 451
+ +K EC+K+AL+ E+ W P P LV+++ + D+E E + L+
Sbjct: 395 GNDERTDKVMECLKKALSSLEK---WEPNPQLVAALFSQIEKKGDIEAAEELLVVLR 448
>gi|326502008|dbj|BAK06496.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 551
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 144/452 (31%), Positives = 248/452 (54%), Gaps = 6/452 (1%)
Query: 39 LYSRISPLGDP-DVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWM-S 96
LY R+S LG+ + S++ VL++W+ EG++ ++L+R +++LR KR AL++ +WM
Sbjct: 86 LYRRLSALGNAGEGSVSAVLNKWLREGRETRSVDLERYVKELRRYKRHSQALELMDWMVH 145
Query: 97 GQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDES 156
+G+ S +HA++LDLI KVRGLE+AE YF L D K + +GALLNCY +++
Sbjct: 146 TKGMNMSYTNHAIRLDLIYKVRGLEAAEKYFEGLPDPAKNHRTFGALLNCYCSSKEEEKA 205
Query: 157 LSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINS 216
L +KM E+G S L N +M LY GQH+K+ + +MKE V PDN + I + S
Sbjct: 206 TDLYRKMDELGISSSTLPINNLMSLYMKLGQHKKVCSLFEEMKEKNVKPDNLTCCILMTS 265
Query: 217 YGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS 276
A +++ +E VL+EME + + + W YST+A+ Y AGL EKA LKK E +V
Sbjct: 266 LAALNKIDDVEQVLKEMEEKDGV-LGWSAYSTLASIYQSAGLVEKAESALKKLEGLVQDR 324
Query: 277 KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKM 336
++ L+S YAS+GN E+ + WG+ K K N Y +ML +L+K+ + + +++
Sbjct: 325 DGRQPFDFLMSLYASVGNLSEVKRVWGVVKATFPKVTNTSYFSMLQALLKLNDADYMKQV 384
Query: 337 LEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYAD 396
EEWE + YD ++ N++ + + GM ++A+ + ++ +KG + + Y
Sbjct: 385 FEEWESNHEFYDAKLTNVMTRAHLKNGMAKEAELLWEKAKEKGACFDSKTCELFLDHYMV 444
Query: 397 KNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK-IKVQ 455
+M+ A ++ + + K + + + + +DV+ E F L+ +
Sbjct: 445 AGDMKSALNWVENVTKLPK--KTAKLDQDKIPKFSKYFEEQKDVQGAERFCRCLRALGCI 502
Query: 456 KRNMYHALTEAHIRSGQEVDGLLESMKADDID 487
Y +L ++ +G+ L + +K D I+
Sbjct: 503 DGKAYESLLRTYLAAGETSRSLRQQIKDDKIE 534
>gi|224121664|ref|XP_002330622.1| predicted protein [Populus trichocarpa]
gi|222872226|gb|EEF09357.1| predicted protein [Populus trichocarpa]
Length = 378
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 127/334 (38%), Positives = 202/334 (60%), Gaps = 6/334 (1%)
Query: 100 LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSL 159
F+ D AV+L LI +VRGLE AE YFN L+ + K YGA+LN VRE V ++ ++
Sbjct: 7 FTFTTEDAAVRLGLIHRVRGLEEAENYFNKLSVKLKTKYTYGAILNGCVREKSVQKAEAV 66
Query: 160 MQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGA 219
MQ+M+E G S+ YN ++ LY+ TG +KIP ++ +M+ NG+ D ++ R I + A
Sbjct: 67 MQEMREGGMTTSSFPYNILIILYSQTGDFDKIPPLMKEMERNGIAEDKYTLRNLIAASVA 126
Query: 220 RSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDA 279
S++S +E +L+ ME + +DW Y+ A+ Y+ G E A+ L+K E ++ K
Sbjct: 127 ASDISGVERILKLMEENPELGLDWKLYAMAADAYLKIGSIETALTMLEKLEKWMAFRKKK 186
Query: 280 LGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEE 339
+N L+S YA GNKDE+ + W L K + ++ Y M+ SL K+ ++E AEK+ EE
Sbjct: 187 AVFNFLLSLYAKTGNKDELYRIWNLYK-PSSESMDTSYCCMIDSLTKLDDIEGAEKIFEE 245
Query: 340 WELSC-YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKN 398
WE C YDFRV N +L+ Y +G+ EKA+A +++ V +G+TP ++W ++A GY + +
Sbjct: 246 WESQCTTTYDFRVLNGLLVAYCNRGLFEKAEAAIEKAV-QGRTPYASTWHVMAKGYMEHD 304
Query: 399 NMEKAFECMKEALAVHEENKFWRPKPSLVSSILD 432
+ K E +K A+ V + W+P P LV++ L+
Sbjct: 305 QIPKTVEMLKRAVNVGRD---WKPDPILVNTCLE 335
>gi|326533934|dbj|BAJ93740.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 149/455 (32%), Positives = 251/455 (55%), Gaps = 14/455 (3%)
Query: 39 LYSRIS--PLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
LY R+S P P + LD+W+ E + + +L +R+LR+ ++ + AL++ +WM
Sbjct: 38 LYKRLSKLPPAAPLGCVAAELDRWLCERKPLCGHQLLFYVRKLRNFRQHRRALELMDWME 97
Query: 97 GQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDES 156
+G DHA++LDLI V GLE+AE YF SL D K K Y +LL+CY E +++
Sbjct: 98 ARGANLLPGDHALRLDLICTVNGLEAAEEYFLSLPDMYKSVKTYSSLLHCYA-EHKAEKA 156
Query: 157 LSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINS 216
L L +KM+ M + L Y +M LY TGQ EKI +M+ NGV DNF+Y + S
Sbjct: 157 LELYEKMRTMNIVPNTLVYKNLMSLYLKTGQPEKILQTFEEMRANGVRTDNFTYYMLTES 216
Query: 217 YGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS 276
+ + L S E L+++E I + W Y+ +A+ Y G +KA + LKK E+++ +
Sbjct: 217 HIMLNGLESTEKFLEDLEKS--IPVHWSLYTRLADSYNKVGQFDKAGLTLKKAEEVMDRG 274
Query: 277 KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKM 336
+ +++L+S YAS GN E+ + W + + K NR Y+ ML +L K+ + + +++
Sbjct: 275 -EMFAWHNLLSLYASSGNLSEVKRVWSSLRSELKISSNRSYLVMLSALKKLDDFDCMQQV 333
Query: 337 LEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYAD 396
+EWEL+ YD R+PN+++ Y K M ++A+A+ + + +G + P ++ I Y +
Sbjct: 334 FQEWELTQESYDMRIPNVMIKAYLAKDMTDEAEALRQTAMAQGHS-NPLTFYIFTESYLE 392
Query: 397 KNNMEKAFECMKEA-LAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL-KIKV 454
K+ E A E ++A V N W P P LV L + +DV+ +E+F + L K++
Sbjct: 393 KSRTEAALEVWRDAGKMVKTPN--WAPPPELVKRFLKHFEEAKDVDGMESFCACLEKLEC 450
Query: 455 QKRNMYHALTEAHIRSGQEVDGLLESMKADDIDED 489
+ AL+ ++ +G++ L S+ I+ED
Sbjct: 451 LDTDARDALSRTYVAAGRKN---LSSVAHHQIEED 482
>gi|357151797|ref|XP_003575907.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Brachypodium distachyon]
Length = 501
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 134/417 (32%), Positives = 233/417 (55%), Gaps = 8/417 (1%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
+ L R+ L P S VL +W EG+ + + +L RV+R+LR +RFKHAL++ EWM
Sbjct: 30 DTLGKRLLKLMYPKRSAVVVLRRWTEEGRTVQKYQLNRVVRELRKYRRFKHALEICEWMR 89
Query: 97 GQG-LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDE 155
Q + DHAV LDL+ KVRGL SAE +F + + K ALL+ YV+ G+ D+
Sbjct: 90 TQPEMKLLPGDHAVHLDLVAKVRGLASAEKFFEDVPERAKGPSTCNALLHAYVQNGVRDK 149
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
+ +++++M + G AL +N +M +Y ++G+ EK+P+++ +++ + PD +Y I +
Sbjct: 150 AEAMLREMADAGYLTCALPFNHMMSMYMSSGELEKVPEMIKELRRYTI-PDLVTYNIWLT 208
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK 275
++ + + E V M+ + DW T+S +A+ YI AGL K L + E S+
Sbjct: 209 YCSRKNSVKTAEKVFDLMKDDK-VFPDWMTFSLMASIYINAGLHVKGRDALVEMEKRASR 267
Query: 276 SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEK 335
K+ Y+ L++ YASL ++ + + W + +K + +Y ML SL + G++ AE
Sbjct: 268 -KERTAYSSLLTLYASLSDRGNLDRVWSKMREIFRKFSDTEYKCMLTSLTRFGDITAAES 326
Query: 336 MLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGY- 394
+ EWE D R+PN IL + + G +E A++ L+ I++KG P+ ++W + GY
Sbjct: 327 VYSEWESESGTRDSRIPNTILSFHIKNGKMEMAESFLQHIMQKGVKPSYSTWELFVWGYL 386
Query: 395 ADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK 451
+ ++K EC+K+AL+ ++ W P P LV+++ + D+E E + L+
Sbjct: 387 GNDERIDKILECLKKALSSLDK---WEPNPQLVAALFSLIEKRGDIEAAEELLVVLR 440
>gi|357440753|ref|XP_003590654.1| WD repeat-containing protein [Medicago truncatula]
gi|355479702|gb|AES60905.1| WD repeat-containing protein [Medicago truncatula]
Length = 562
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 149/461 (32%), Positives = 249/461 (54%), Gaps = 13/461 (2%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKIS-ELELQRVIRQLRSRKRFKHALQVSEWM 95
+ L R+ L P S +++W EG + + +L R+IR+LR KR+KHAL+V EWM
Sbjct: 36 DTLGRRLLSLVYPKRSAVIAINKWKEEGHTLPRKYQLNRMIRELRKNKRYKHALEVCEWM 95
Query: 96 SGQG-LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVD 154
Q + D+AVQLDLI KVRGL SAE +F L D+ + ALL+ YV+ L +
Sbjct: 96 KLQNDIKLVEGDYAVQLDLITKVRGLNSAEKFFEDLPDKMRGQPTCTALLHAYVQNNLTN 155
Query: 155 ESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICI 214
++ +LM KM E G S + YN +M LY + G+ EK+P + ++K N PD ++ + +
Sbjct: 156 KAEALMSKMSECGFLRSPVPYNRMMSLYISNGKLEKVPKLFEELKVN-TSPDVVTFNLLL 214
Query: 215 NSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYI----IAGLKEKAIIYLKKCE 270
+ + +++ + E VL +++ ++ + DW TYST+ N YI + EKA LK+ E
Sbjct: 215 TACASENDVETAERVLLQLK-KAKVDPDWVTYSTLTNLYIRNASVDDCLEKAASTLKEME 273
Query: 271 DIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGEL 330
S+ + + Y+ L+S +A++GN DE+ + WG K K + +Y+ M+ SLVK+G+
Sbjct: 274 KRTSR-ETRVAYSSLLSLHANMGNVDEVNRIWGKMKACFCKMSDDEYVCMISSLVKLGDF 332
Query: 331 EEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSII 390
E + +EWE D RV N++L Y +G +E A+ ++V+KG + +SW ++
Sbjct: 333 AGVENLYKEWESVSGTNDVRVSNLLLTSYVDQGQMEMAEIFCNQLVEKGVCLSYSSWELL 392
Query: 391 AAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL 450
GY K +++K +A++ K W P P LV + + +E E + L
Sbjct: 393 TRGYLKKKDVKKFLHYFGKAIS---SVKQWIPDPRLVQEAFTVIQEQAHIEGAEQLLVIL 449
Query: 451 KIKVQ-KRNMYHALTEAHIRSGQEVDGLLESMKADDIDEDK 490
+ N+Y+ + + +G+ + E MK D++ DK
Sbjct: 450 RNAGHVNTNIYNLFLKTYAAAGKMPLVVAERMKKDNVQLDK 490
>gi|297809953|ref|XP_002872860.1| hypothetical protein ARALYDRAFT_490379 [Arabidopsis lyrata subsp.
lyrata]
gi|297318697|gb|EFH49119.1| hypothetical protein ARALYDRAFT_490379 [Arabidopsis lyrata subsp.
lyrata]
Length = 500
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 140/431 (32%), Positives = 235/431 (54%), Gaps = 7/431 (1%)
Query: 23 IFTRAYRAVKPVARNN--LYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLR 80
I A +V A+ N +Y ++S LG + L+Q V+EG + + EL R + LR
Sbjct: 22 ISGEAAASVPTKAKKNPSVYKKLSSLGTRGGKMEETLNQLVMEGVPVKKHELIRYAKDLR 81
Query: 81 SRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLY 140
++ + AL++ EWM + + F+ DHA++LDLI K +GLE+AETYFNSLND K Y
Sbjct: 82 KFRQPQRALEIFEWMERKEIVFTGSDHAIRLDLIAKTKGLEAAETYFNSLNDSIKNQSTY 141
Query: 141 GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKE 200
G+LLNCY E D++ + + M ++ ++L +N +M +Y GQ EK+P +++ MK+
Sbjct: 142 GSLLNCYCVEKEEDKAKAHFENMVDLNHVSNSLPFNNLMAMYLRIGQSEKVPALVVAMKQ 201
Query: 201 NGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKE 260
+ P + +Y + I S G+ +L +E VL EM+++ W T++ +A YI GL +
Sbjct: 202 KNITPCDITYSMWIQSCGSLKDLDGVEKVLDEMKAEGEGISSWDTFANLAAIYIKVGLYD 261
Query: 261 KAIIYLKKCEDIVSKS-KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
KA LK E+ ++ +D Y+ LIS YA + N E+ + W L K + N Y+T
Sbjct: 262 KAEEALKSLENKMNPHIRDC--YHFLISLYAGIANASEVYRVWDLLKKRHPNVNNSSYLT 319
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
ML +L K+ +++ +K+ EWE +C+ YD R+ N+ + Y ++ M E+A+AV + K
Sbjct: 320 MLQALSKLNDIDGIKKIFTEWESTCWTYDMRMANVAISSYLKQNMYEEAEAVFNGAMTKC 379
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRD 439
K + ++ + + A + + AV + +K W L+SS + +D
Sbjct: 380 KGQFSKARQLLMMHLLKNDQADLALKHFEA--AVLDLDKNWTWSSELISSFFLHFEEAKD 437
Query: 440 VEEVEAFVSSL 450
V+ E F +L
Sbjct: 438 VDGAEEFCKTL 448
>gi|242083618|ref|XP_002442234.1| hypothetical protein SORBIDRAFT_08g016710 [Sorghum bicolor]
gi|241942927|gb|EES16072.1| hypothetical protein SORBIDRAFT_08g016710 [Sorghum bicolor]
Length = 501
Score = 234 bits (598), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 135/412 (32%), Positives = 223/412 (54%), Gaps = 7/412 (1%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
+ L R+ L P S VL +W EG+ + + +L RV+R+LR RFKHAL++ EWM
Sbjct: 30 DTLGKRLLKLIYPKRSAVVVLRRWAEEGRTVEKYQLNRVVRELRKYGRFKHALEICEWMR 89
Query: 97 GQG-LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDE 155
+ + DHAV LDL+ KVRGL SA +F + + K ALL+ YV+ G ++
Sbjct: 90 TRPEMRLLPGDHAVHLDLVAKVRGLASAVKFFEDMPERAKAPSTCNALLHAYVQHGAREK 149
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
+ ++M +M G AL +N +M LY +G+ E++P+++ +++ VP D +Y + +
Sbjct: 150 AEAMMAEMARAGYLTCALPFNHMMSLYMASGELERVPEMIKELRRYTVP-DLVTYNMWLT 208
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK 275
+ + S E V M+ + DW T+S + + YI AGL + L + E + S+
Sbjct: 209 YCSKKKSVKSAEKVFALMKDD-RVVPDWMTFSLLGSIYINAGLHVEGRNALVEMEKMASR 267
Query: 276 SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEK 335
K+ Y+ L++ YASL ++ + + W + +K + +Y ML SL + ++ AE
Sbjct: 268 -KERAAYSSLLTLYASLSDRGNLDRVWNKMRETFRKFSDTEYKCMLTSLTRFNDIAAAEG 326
Query: 336 MLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYA 395
+ EWE + D R+PN IL Y + GMIEKA++ L +IV+KG P+ ++W + GY
Sbjct: 327 LYREWESASGTRDSRIPNTILSYYIKNGMIEKAESFLGQIVEKGVKPSYSTWELFIWGYL 386
Query: 396 DKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFV 447
N +K EC+K+AL+ E+ W P L ++I + D+E E +
Sbjct: 387 GDNKTDKVLECLKKALSSLEK---WEPNHELATAIFSQVEKTGDIEAAEKLL 435
>gi|42570837|ref|NP_973492.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|119935915|gb|ABM06033.1| At2g20710 [Arabidopsis thaliana]
gi|330251966|gb|AEC07060.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 395
Score = 234 bits (597), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 124/336 (36%), Positives = 200/336 (59%), Gaps = 3/336 (0%)
Query: 106 DHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKE 165
D A++LDLI KV GL AE +F ++ E + LYGALLNCY + ++ ++ + Q+MKE
Sbjct: 13 DVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKAEQVFQEMKE 72
Query: 166 MGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSS 225
+G L YN ++ LY TG++ + +L +M++ V PD F+ +++Y S++
Sbjct: 73 LGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAYSVVSDVEG 132
Query: 226 MENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHL 285
ME L E+ + +DW TY+ AN YI AGL EKA+ L+K E +V+ K Y L
Sbjct: 133 MEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQKRKHAYEVL 192
Query: 286 ISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCY 345
+S Y + G K+E+ + W L K + N YI+++ +L+K+ ++EE EK++EEWE
Sbjct: 193 MSFYGAAGKKEEVYRLWSLYK-ELDGFYNTGYISVISALLKMDDIEEVEKIMEEWEAGHS 251
Query: 346 CYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
+D R+P++++ GY +KGM+EKA+ V+ +V+K + ++W +A GY MEKA E
Sbjct: 252 LFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKMAGKMEKAVE 311
Query: 406 CMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVE 441
K A+ V + WRP ++ S +D+L RD+E
Sbjct: 312 KWKRAIEVSKPG--WRPHQVVLMSCVDYLEGQRDME 345
>gi|125549215|gb|EAY95037.1| hypothetical protein OsI_16851 [Oryza sativa Indica Group]
Length = 511
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 139/435 (31%), Positives = 235/435 (54%), Gaps = 6/435 (1%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
++LY RI+ +G + L W +++ + EL R+ R+LR +RF ALQV +WM+
Sbjct: 76 SSLYRRIA-VGHGGRPVGRTLGAWDEGERRLDKWELCRIARELRKFRRFNLALQVYDWMT 134
Query: 97 GQGLAFSVH--DHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVD 154
+ FS+ D A+QLDLI KVRG+ AE YF L D K + YG+LLN Y + + +
Sbjct: 135 ERRDRFSLSSSDMAIQLDLIAKVRGVSHAEEYFEELPDPLKDKRTYGSLLNVYAQAMMKE 194
Query: 155 ESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICI 214
++ S ++M++ G L +N +M Y + + EK+ ++ +M E V D +Y I I
Sbjct: 195 KTESTFEQMRKKGFATDTLPFNVLMNFYVDAEEAEKVSILIDEMMERNVAFDVCTYNIWI 254
Query: 215 NSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVS 274
S A + +ME V +M + +W TY+T+A+ +I G EKA LK+ E +
Sbjct: 255 KSCAAMQDADAMEQVFNQMIRDETVVANWTTYTTLASMHIKLGNSEKAEESLKEAEKRTT 314
Query: 275 KSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
++ +++L++ Y+ LG K+E+ + W K N Y +L +LV++G++E AE
Sbjct: 315 -GREKKCFHYLMTLYSHLGKKEEVYRVWNWYKATFPTIHNLGYQEVLSALVRLGDIEGAE 373
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGY 394
+ EEW +D + NI+L Y+++G + KA+ L V+KG P PN+W I+ Y
Sbjct: 374 LLYEEWASKSSSFDPKTMNILLAWYAREGFVTKAEQTLNRFVEKGGNPKPNTWEILGTAY 433
Query: 395 ADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKV 454
+A C+++A AV +K WRP+P+ V S+L + D E + ++ L+ +
Sbjct: 434 LKDGQSSEALSCLEKATAVASPSK-WRPRPTNVESLLANFKEKNDAESADRLMNVLRSRR 492
Query: 455 QKRN-MYHALTEAHI 468
+ N Y +L ++
Sbjct: 493 CEENEEYKSLINTYV 507
>gi|32488964|emb|CAE04345.1| OSJNBb0038F03.9 [Oryza sativa Japonica Group]
Length = 511
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 137/424 (32%), Positives = 230/424 (54%), Gaps = 5/424 (1%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
++LY RI+ +G + L W +++ + EL R+ R+LR +RF ALQV +WM+
Sbjct: 76 SSLYRRIA-VGHGGRPVGRTLGAWDEGERRLDKWELCRIARELRKFRRFNLALQVYDWMT 134
Query: 97 GQGLAFSVH--DHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVD 154
+ FS+ D A+QLDLI KVRG+ AE YF L D K + YG+LLN Y + + +
Sbjct: 135 ERRDRFSLSSSDMAIQLDLIAKVRGVSHAEEYFEELPDPLKDKRTYGSLLNVYAQAMMKE 194
Query: 155 ESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICI 214
++ S ++M++ G L +N +M Y + + EK+ ++ +M E V D +Y I I
Sbjct: 195 KTESTFEQMRKKGFATDTLPFNVLMNFYVDAEEAEKVSILIDEMMERNVAFDVCTYNIWI 254
Query: 215 NSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVS 274
S A + +ME V +M + +W TY+T+A+ +I G EKA LK+ E +
Sbjct: 255 KSCAAMQDADAMEQVFNQMIRDETVVANWTTYTTLASMHIKLGNSEKAEESLKEAEKRTT 314
Query: 275 KSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
++ +++L++ Y+ LG K+E+ + W K N Y +L +LV++G++E AE
Sbjct: 315 -GREKKCFHYLMTLYSHLGKKEEVYRVWNWYKATFPTIHNLGYQEVLSALVRLGDIEGAE 373
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGY 394
+ EEW +D + NI+L Y+++G + KA+ L V+KG P PN+W I+ Y
Sbjct: 374 LLYEEWASKSSSFDPKTMNILLAWYAREGFVTKAEQTLNRFVEKGGNPKPNTWEILGTAY 433
Query: 395 ADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKV 454
+A C+++A AV +K WRP+P+ V S+L + D E + ++ L+ +
Sbjct: 434 LKDGQSSEALSCLEKATAVASPSK-WRPRPTNVESLLANFKEKNDAESADRLMNVLRSRR 492
Query: 455 QKRN 458
+ N
Sbjct: 493 CEEN 496
>gi|15235508|ref|NP_192191.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213327|sp|Q9SY07.1|PP302_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g02820, mitochondrial; Flags: Precursor
gi|4263527|gb|AAD15353.1| hypothetical protein [Arabidopsis thaliana]
gi|7269767|emb|CAB77767.1| hypothetical protein [Arabidopsis thaliana]
gi|332656833|gb|AEE82233.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 532
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 144/457 (31%), Positives = 248/457 (54%), Gaps = 8/457 (1%)
Query: 35 ARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEW 94
R+ L R+ L S + +W EG + + EL R++R+LR KR+KHAL++ EW
Sbjct: 59 GRDTLGGRLLSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEW 118
Query: 95 MSGQ-GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLV 153
M Q + D+AV LDLI K+RGL SAE +F + D+ + +LL+ YV+ L
Sbjct: 119 MVVQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLS 178
Query: 154 DESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRIC 213
D++ +L +KM E G S L YN ++ +Y + GQ EK+P ++ ++K PD +Y +
Sbjct: 179 DKAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIR-TSPDIVTYNLW 237
Query: 214 INSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIV 273
+ ++ + +++ E V + + + ++ DW TYS + N Y EKA + LK+ E +V
Sbjct: 238 LTAFASGNDVEGAEKVYLKAKEEK-LNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLV 296
Query: 274 SKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEA 333
SK K+ + Y LIS +A+LG+KD + W K KK + +Y++M+ ++VK+GE E+A
Sbjct: 297 SK-KNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQA 355
Query: 334 EKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAG 393
+ + +EWE D R+PN+IL Y + + + + IV+KG P+ ++W I+
Sbjct: 356 KGLYDEWESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWA 415
Query: 394 YADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL-KI 452
Y + +MEK +C +A+ + K W LV L + +V+ E ++ L K
Sbjct: 416 YLKRKDMEKVLDCFGKAI---DSVKKWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKA 472
Query: 453 KVQKRNMYHALTEAHIRSGQEVDGLLESMKADDIDED 489
+Y++L + ++G+ + E M D+++ D
Sbjct: 473 GYVNTQLYNSLLRTYAKAGEMALIVEERMAKDNVELD 509
>gi|17064738|gb|AAL32523.1| Unknown protein [Arabidopsis thaliana]
gi|27311917|gb|AAO00924.1| Unknown protein [Arabidopsis thaliana]
Length = 532
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 143/457 (31%), Positives = 248/457 (54%), Gaps = 8/457 (1%)
Query: 35 ARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEW 94
R+ L R+ L S + +W EG + + EL R++R+LR KR+KHAL++ EW
Sbjct: 59 GRDTLGGRLLSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEW 118
Query: 95 MSGQ-GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLV 153
M Q + D+AV LDLI K+RGL SAE +F + D+ + +LL+ YV+ L
Sbjct: 119 MVVQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLS 178
Query: 154 DESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRIC 213
D++ +L +KM E G S L YN ++ +Y + GQ EK+P ++ ++K PD +Y +
Sbjct: 179 DKAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIR-TSPDIVTYNLW 237
Query: 214 INSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIV 273
+ ++ + +++ E V + + + ++ DW TYS + N Y EKA + L++ E +V
Sbjct: 238 LTAFASGNDVEGAEKVYLKAKEEK-LNPDWVTYSVLTNLYAKTDNVEKARLALREMEKLV 296
Query: 274 SKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEA 333
SK K+ + Y LIS +A+LG+KD + W K KK + +Y++M+ ++VK+GE E+A
Sbjct: 297 SK-KNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQA 355
Query: 334 EKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAG 393
+ + +EWE D R+PN+IL Y + + + + IV+KG P+ ++W I+
Sbjct: 356 KGLYDEWESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWA 415
Query: 394 YADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL-KI 452
Y + +MEK +C +A+ + K W LV L + +V+ E ++ L K
Sbjct: 416 YLKRKDMEKVLDCFGKAI---DSVKKWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKA 472
Query: 453 KVQKRNMYHALTEAHIRSGQEVDGLLESMKADDIDED 489
+Y++L + ++G+ + E M D+++ D
Sbjct: 473 GYVNTQLYNSLLRTYAKAGEMALIVEERMAKDNVELD 509
>gi|297603118|ref|NP_001053460.2| Os04g0544400 [Oryza sativa Japonica Group]
gi|255675659|dbj|BAF15374.2| Os04g0544400 [Oryza sativa Japonica Group]
Length = 571
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 137/424 (32%), Positives = 230/424 (54%), Gaps = 5/424 (1%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
++LY RI+ +G + L W +++ + EL R+ R+LR +RF ALQV +WM+
Sbjct: 76 SSLYRRIA-VGHGGRPVGRTLGAWDEGERRLDKWELCRIARELRKFRRFNLALQVYDWMT 134
Query: 97 GQGLAFSVH--DHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVD 154
+ FS+ D A+QLDLI KVRG+ AE YF L D K + YG+LLN Y + + +
Sbjct: 135 ERRDRFSLSSSDMAIQLDLIAKVRGVSHAEEYFEELPDPLKDKRTYGSLLNVYAQAMMKE 194
Query: 155 ESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICI 214
++ S ++M++ G L +N +M Y + + EK+ ++ +M E V D +Y I I
Sbjct: 195 KTESTFEQMRKKGFATDTLPFNVLMNFYVDAEEAEKVSILIDEMMERNVAFDVCTYNIWI 254
Query: 215 NSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVS 274
S A + +ME V +M + +W TY+T+A+ +I G EKA LK+ E +
Sbjct: 255 KSCAAMQDADAMEQVFNQMIRDETVVANWTTYTTLASMHIKLGNSEKAEESLKEAEKRTT 314
Query: 275 KSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
++ +++L++ Y+ LG K+E+ + W K N Y +L +LV++G++E AE
Sbjct: 315 -GREKKCFHYLMTLYSHLGKKEEVYRVWNWYKATFPTIHNLGYQEVLSALVRLGDIEGAE 373
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGY 394
+ EEW +D + NI+L Y+++G + KA+ L V+KG P PN+W I+ Y
Sbjct: 374 LLYEEWASKSSSFDPKTMNILLAWYAREGFVTKAEQTLNRFVEKGGNPKPNTWEILGTAY 433
Query: 395 ADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKV 454
+A C+++A AV +K WRP+P+ V S+L + D E + ++ L+ +
Sbjct: 434 LKDGQSSEALSCLEKATAVASPSK-WRPRPTNVESLLANFKEKNDAESADRLMNVLRSRR 492
Query: 455 QKRN 458
+ N
Sbjct: 493 CEEN 496
>gi|297808773|ref|XP_002872270.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318107|gb|EFH48529.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 492
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 149/463 (32%), Positives = 250/463 (53%), Gaps = 8/463 (1%)
Query: 34 VARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSE 93
+A N I P S+T +L + + G ++ EL+ + ++L R+ ALQ+ E
Sbjct: 32 LAHRNSLKEILRKNGPRRSVTSLLQERIDSGHAVALSELRFISKRLIRSNRYDLALQMIE 91
Query: 94 WMSGQG-LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL----YGALLNCYV 148
WM Q + FSV+D +++L+LI K GL+ AE YF L + ++ Y LL YV
Sbjct: 92 WMENQKEIQFSVYDISLRLELIIKTHGLKQAEEYFEKLLNSSASLRVAKSAYLPLLRSYV 151
Query: 149 REGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNF 208
++ +V E M+K+ +G + +N +M LY +GQ+EK+ V+ MK N +P +
Sbjct: 152 KKKMVKEGEVFMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKVNKIPRNVL 211
Query: 209 SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKK 268
SY + +N+ S ++++E V +EM + + W + T+AN YI G EKA + L+
Sbjct: 212 SYNLWMNACCQVSGVTAVETVYREMVGDKSVEVGWSSLCTLANVYIKGGFDEKAKLVLEN 271
Query: 269 CEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIG 328
E ++++S + LGY LI+ YASLG+K+ +++ W K+ C + +YI +L SLVKIG
Sbjct: 272 AEKLLNRS-NRLGYFFLITLYASLGDKEGVVRLWEASKLVCGRISCANYICVLSSLVKIG 330
Query: 329 ELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWS 388
+LEEAE++ EWE C+ YD RV N++L Y + G I KA+++ ++++G P +W
Sbjct: 331 DLEEAERVFNEWEAQCFNYDVRVSNVLLGAYMRNGEIRKAESLHARVLERGGNPNYKTWE 390
Query: 389 IIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVS 448
I+ G+ +MEKA M A + + WRP S+V +I + + +EE ++
Sbjct: 391 ILMEGWVKCQSMEKAIVAMHRAFELM-KGCHWRPSESIVMAIAKYFEEEEKIEEANTYIR 449
Query: 449 SL-KIKVQKRNMYHALTEAHIRSGQEVDGLLESMKADDIDEDK 490
L + + +Y L + + + E MK D I D+
Sbjct: 450 DLHHLGLASLPLYRLLLRMQEHAQRPAFDIYEMMKLDKIGIDE 492
>gi|242057165|ref|XP_002457728.1| hypothetical protein SORBIDRAFT_03g012450 [Sorghum bicolor]
gi|241929703|gb|EES02848.1| hypothetical protein SORBIDRAFT_03g012450 [Sorghum bicolor]
Length = 530
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 141/452 (31%), Positives = 248/452 (54%), Gaps = 6/452 (1%)
Query: 39 LYSRISPLG-DPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWM-S 96
LY R+S LG + S++ VL++WV EG EL + +++LR KR HAL+V +WM +
Sbjct: 66 LYRRLSALGIAGEGSVSRVLNKWVREGGAPRSEELVKHVKELRKYKRHAHALEVMDWMVN 125
Query: 97 GQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDES 156
+G+ S+ +HA++LDLI KVRGLE+AE YF +L D K + YGALL+CY + +++
Sbjct: 126 ARGMNMSITNHAIRLDLIYKVRGLEAAENYFANLPDPAKNHRTYGALLSCYCSAKMEEKA 185
Query: 157 LSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINS 216
L ++M E+G + L N +M LY QH K+ + +MK + PD+ + I + S
Sbjct: 186 TYLYRQMDELGFWSGTLPINNLMSLYMKLDQHRKVDSLFEEMKVKNIKPDSLTCCILMTS 245
Query: 217 YGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS 276
Y A +++ ++E +L+EM + +S+ W YST+A+ Y+ AG EKA LKK E ++
Sbjct: 246 YAASNKIDAIEELLKEM-VEKDVSLGWSAYSTLASIYVNAGQVEKAESALKKLEGLIGAE 304
Query: 277 KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKM 336
++ L+S YASLGN E+ + W + K K N Y+ ML +L K+ +++ +++
Sbjct: 305 DGRQPFDFLMSLYASLGNLSEINRVWDVIKAKFSTVTNISYLGMLHALYKLNDIDRMKQI 364
Query: 337 LEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYAD 396
EWE + YD R+ N+++ G+ + GM E+A+ + ++ +KG + + Y
Sbjct: 365 YMEWESNYQTYDVRLTNMMIRGHLRLGMSEEAETLREKAKEKGVEFDSKTCELFLDHYMG 424
Query: 397 KNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK-IKVQ 455
K +M A ++ + K + + + +++D + E F + L+ +
Sbjct: 425 KGDMNSALNWVENMTKL--PKKAGKLDQDRIYKFQKYFEEHKDADSAERFCNCLRMLGCI 482
Query: 456 KRNMYHALTEAHIRSGQEVDGLLESMKADDID 487
Y +L ++ +G++ L + +K D I+
Sbjct: 483 DGKAYESLLRTYLAAGKKSCSLRQQIKNDKIE 514
>gi|297814019|ref|XP_002874893.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297320730|gb|EFH51152.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 525
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 143/457 (31%), Positives = 251/457 (54%), Gaps = 8/457 (1%)
Query: 35 ARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEW 94
R+ L R+ L S + +W EG + + EL R++R+LR KR+KHAL++ EW
Sbjct: 52 GRDTLGGRLLSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEW 111
Query: 95 MSGQ-GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLV 153
M Q + D+AV LDLI K+RGL SAE +F L D+ + +LL+ YV+ L
Sbjct: 112 MVLQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDLPDQMRGHAACTSLLHSYVQNKLS 171
Query: 154 DESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRIC 213
D++ +L +KM E G S L YN ++ ++ + GQ EK+ ++ ++K PD +Y +
Sbjct: 172 DKAEALFEKMGECGFLKSCLPYNHMLSMFISKGQFEKVSVLIKELKMK-TSPDIVTYNLW 230
Query: 214 INSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIV 273
+ ++ + +++ E V + + +S ++ DW TYS + N Y EKA + LK+ E +V
Sbjct: 231 LTAFASGNDVEGAEKVYLKAK-ESKLNPDWVTYSVLTNLYAKTDNLEKAKLALKEMEKLV 289
Query: 274 SKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEA 333
SK K+ + Y LIS +A+LG+KD + W + KK + +Y++M+ ++VK+GE E+A
Sbjct: 290 SK-KNRVAYASLISLHANLGDKDGVNLTWKKVRSSFKKMNDAEYLSMISAVVKLGEFEQA 348
Query: 334 EKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAG 393
+ + +EWE D R+PN+IL Y + I + + IV+KG P+ ++W I+
Sbjct: 349 KGLYDEWESVSGTGDARIPNLILAEYMNRDEILLGEKFYERIVEKGINPSYSTWEILTWA 408
Query: 394 YADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL-KI 452
Y + ++EK +C ++A+ + K W LV ++ L + +V+ E ++ L K
Sbjct: 409 YLKRKDLEKVLDCFEKAI---DSVKKWTVNVRLVKAVCKELEEQGNVKGAEKLMTLLQKA 465
Query: 453 KVQKRNMYHALTEAHIRSGQEVDGLLESMKADDIDED 489
+Y++L + ++G+ + E M D+++ D
Sbjct: 466 GHVNTQLYNSLLRTYAKAGEMALIVEERMAKDNVELD 502
>gi|356518447|ref|XP_003527890.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Glycine max]
Length = 496
Score = 231 bits (589), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 144/469 (30%), Positives = 254/469 (54%), Gaps = 14/469 (2%)
Query: 25 TRAYRAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKR 84
+RA P AR +S+ SPL P L WV +G +S +L+ + R L KR
Sbjct: 26 SRASAFPMPFARKFKFSKQSPL--------PALQNWVDQGNDVSPFQLRSIARTLVKSKR 77
Query: 85 FKHALQVSEWMSGQ-GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGAL 143
+ HAL+V EW+ Q DHA++L+LI + GL AE YF +L D L
Sbjct: 78 YHHALEVFEWIKNQKNFHMIPADHAMKLELIIENHGLMEAEEYFMNLPDSAAKKAACLIL 137
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
L YVR+ ++ + M K+ E+G S +N +M LY T ++ K+P V+ MK N +
Sbjct: 138 LRGYVRDRDTSKAETFMLKLYELGLVVSPHPFNEMMKLYLVTCEYRKVPLVIQQMKRNKI 197
Query: 204 PPDNFSYRICINSYGARSE--LSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
P + SY + +N+ ++++E V ++M + ++ + WG+ +T+AN Y AG +K
Sbjct: 198 PCNVLSYNLWMNACSEEEGYVVAAVETVFRQMLNDRNVEVGWGSLATLANAYKKAGQSKK 257
Query: 262 AIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITML 321
AI+ LK E +S + LG+ LI+ YASL +K+ +++ W K + +YI +L
Sbjct: 258 AILVLKDAEKKLSTC-NRLGHFFLITLYASLKDKEGVLRLWEASKAVRGRISCANYICIL 316
Query: 322 GSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKT 381
LVK+G++ +A+++ EWE +C YD RV N++L Y + G++E+A+++ ++KG
Sbjct: 317 TCLVKLGDIVQAKRIFLEWESNCQKYDIRVSNVLLGAYVRNGLMEEAESLHLHTLQKGGC 376
Query: 382 PTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVE 441
P + I+ GY + M++A MK ALA+ ++ WRP +V +I ++L + ++E
Sbjct: 377 PNYKTLEILMEGYVNWQKMDEAIITMKRALAMMKDCH-WRPPHGIVLAIAEYLEKDGNLE 435
Query: 442 EVEAFVSSL-KIKVQKRNMYHALTEAHIRSGQEVDGLLESMKADDIDED 489
+ +++ + + + ++Y L H+ + + +L+ M D ++ D
Sbjct: 436 YADKYITDIHNLGLVSLSLYKVLLRMHLSANKPPFHILKMMDEDKVEID 484
>gi|326507912|dbj|BAJ86699.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 148/455 (32%), Positives = 243/455 (53%), Gaps = 19/455 (4%)
Query: 29 RAVKPVARNNLYSRISPL--GDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFK 86
R ++P A LY RIS + G P ++ +D+W+ + ++ S+L++ +R+L K+ +
Sbjct: 42 RGLEP-AWVPLYKRISKVSQGKPPGTVAAEMDEWLRQRRRPSQLQVLAYVRELTRFKKNE 100
Query: 87 HALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNC 146
AL++ +WM +G S A++LDLI KV G+++AE YF S+ D K K Y LLNC
Sbjct: 101 SALELLDWMESRGANLSPGHQAMRLDLISKVHGIQAAEEYFWSIPDISKSVKTYSCLLNC 160
Query: 147 YVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPD 206
Y + GL + L +KMK L YN +M LY GQ EKI +M+E+G+ D
Sbjct: 161 YGKHGLAYKGLEFYEKMKAKSIVPDKLVYNYLMILYQKAGQPEKILSTFEEMRESGISAD 220
Query: 207 NFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYL 266
F+Y I SY ++L + E VL E++ + + W Y+ +AN YI L KA + +
Sbjct: 221 KFAYFTLIESYITMNDLDAAEKVLAELQKVAPV--HWSLYTLMANNYIKLKLFGKAEVAI 278
Query: 267 KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVK 326
KK E+ + K+ D + L+S +A GN E+ + W K KK LNR Y+ ML +L
Sbjct: 279 KKAEEGMDKA-DLRSWYALLSLHAHCGNSTEVKRVWKSLKSTFKKCLNRSYLVMLQALSM 337
Query: 327 IGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNS 386
I + E +++ +EW+ S YD R+ N+++ Y KGMI++A+A+ + + +G
Sbjct: 338 IDDFESLQQIFQEWQSSHEHYDKRIANVVIKAYLDKGMIDEAEAIRQSTMAQG------H 391
Query: 387 W-----SIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVE 441
W I A Y DK+++ A E +++A + K W P LVS L ++ D
Sbjct: 392 WHEGMVCIFAEFYLDKSDVNAALEILRDAKNMVMARK-WVPSKELVSRFLKHYEESNDAS 450
Query: 442 EVEAFVSSL-KIKVQKRNMYHALTEAHIRSGQEVD 475
E+F+ L K++ + + A + ++ +G+ D
Sbjct: 451 GAESFLECLKKLECLDLDAFEAAKQTYVVAGRASD 485
>gi|224084592|ref|XP_002307350.1| predicted protein [Populus trichocarpa]
gi|222856799|gb|EEE94346.1| predicted protein [Populus trichocarpa]
Length = 511
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 143/481 (29%), Positives = 251/481 (52%), Gaps = 10/481 (2%)
Query: 14 RNFTKTNLEI--FTRAYRAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELE 71
RN K+ L I + Y+ + + + L + I L P + VL W+ G K+ +
Sbjct: 25 RNLFKSLLPISKASTKYKYIHSSSSSRLETEILRLKSP----SRVLQDWINNGNKVKLSQ 80
Query: 72 LQRVIRQLRSRKRFKHALQVSEWMSGQG-LAFSVHDHAVQLDLIGKVRGLESAETYFNSL 130
L + +QL KR+K AL++ +WM Q + HA+ ++LI KV GL A YF +
Sbjct: 81 LNLISKQLLKSKRYKQALEILQWMENQNNFRITPGHHALMMELIVKVNGLNKAGEYFERI 140
Query: 131 NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEK 190
LL+ YV+E + ++ S M K+ G + YN +M LY Q+EK
Sbjct: 141 PGSGSKKAASLPLLHGYVKERDISKAESFMIKLSSSGLLVTPHPYNEMMKLYMALSQYEK 200
Query: 191 IPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVA 250
+P V+ +MK N + + SY + + ++G E++ E V +EM S ++ + W T +++A
Sbjct: 201 VPLVIAEMKRNKLCRNVLSYNLWMGAFGEVFEVAKAEMVYKEMVSDENVGVGWSTLASLA 260
Query: 251 NYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCK 310
N YI AG +KA++ LK E +S + LGY LI+ Y+SL NK+ +++ W K
Sbjct: 261 NVYIKAGFVDKALLVLKDAEMKLS-TNGRLGYFFLITLYSSLKNKEGVLRLWEASKAVGG 319
Query: 311 KQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADA 370
+ DY+ ++ LVK+G+L AE++ EWE +C+ YD RV N++L Y + G++ KA++
Sbjct: 320 RIPCADYMCVISCLVKVGDLVAAEQVFAEWETNCFKYDIRVSNVLLGAYVRNGLMGKAES 379
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHE-ENKFWRPKPSLVSS 429
V++G P +W I+ G+ M+KA + MK+ +V + E WRP S++ +
Sbjct: 380 FHLHTVERGGCPNYKTWEILMEGWVKSQKMDKAIDAMKKGFSVLKVERCDWRPSHSILMA 439
Query: 430 ILDWLGDNRDVEEVEAFVSSLK-IKVQKRNMYHALTEAHIRSGQEVDGLLESMKADDIDE 488
I + + + E+ ++ ++ + V +Y ++ + + +L+ M+ D I+
Sbjct: 440 IAEHFEKHGNFEDANHYIKAVHGLGVATLPLYKLFLRMYLNAQRPAWDILKMMEKDRIEL 499
Query: 489 D 489
D
Sbjct: 500 D 500
>gi|356536769|ref|XP_003536907.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Glycine max]
Length = 516
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 144/457 (31%), Positives = 247/457 (54%), Gaps = 9/457 (1%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKIS-ELELQRVIRQLRSRKRFKHALQVSEWM 95
+ L R+ L P S +++W EG + + +L R++R+LR KR+KHAL+V EWM
Sbjct: 44 DTLGRRLLSLVYPKRSAVVAINKWKEEGHEPPRKYQLNRIVRELRKDKRYKHALEVCEWM 103
Query: 96 SGQ-GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVD 154
+ Q + D+AV LDLI KVRGL SAE +F L D + + ALL+ YV+ LVD
Sbjct: 104 TLQKDMKLVQGDYAVHLDLITKVRGLNSAEKFFEDLPDRMRGKQTCSALLHAYVQNNLVD 163
Query: 155 ESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICI 214
++ +LM KM E + L YN ++ LY + G+ EK+P ++ ++K N PD ++ + +
Sbjct: 164 KAEALMLKMSECDLLINPLPYNHMISLYISNGKLEKVPKIIQELKMN-TSPDIVTFNLWL 222
Query: 215 NSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVS 274
+ +++++ + E VL E++ ++ I DW TYST+ N YI EKA +K+ E+ S
Sbjct: 223 AACASQNDVETAERVLLELK-KAKIDPDWVTYSTLTNLYIKNASLEKAGATVKEMENRTS 281
Query: 275 KSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
+ K + Y+ L+S + ++GNKD++ + W K +K + +YI M+ SL+K+G+ AE
Sbjct: 282 R-KTRVAYSSLLSLHTNMGNKDDVNRIWEKMKASFRKMNDNEYICMISSLLKLGDFAGAE 340
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGY 394
+ EWE D RV NI+L Y + +E A+ +IV+KG P +W + GY
Sbjct: 341 DLYREWESVSGTNDVRVSNILLGSYINQDQMEMAEDFCNQIVQKGVIPCYTTWELFTWGY 400
Query: 395 ADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKV 454
+ ++EK + +A++ + W P LV + + + E + L+
Sbjct: 401 LKRKDVEKFLDYFSKAISSVTK---WSPDQRLVQEAFKIIEEQAHTKGAEQLLVILRNAG 457
Query: 455 Q-KRNMYHALTEAHIRSGQEVDGLLESMKADDIDEDK 490
N+Y+ + + +G+ + E M+ D++ D+
Sbjct: 458 HVNTNIYNLFLKTYATAGKMPMIVAERMRKDNVKLDE 494
>gi|226530677|ref|NP_001151760.1| tetratricopeptide-like helical [Zea mays]
gi|195649553|gb|ACG44244.1| tetratricopeptide-like helical [Zea mays]
gi|223942137|gb|ACN25152.1| unknown [Zea mays]
gi|413916645|gb|AFW56577.1| Tetratricopeptide-like helical [Zea mays]
Length = 501
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 137/413 (33%), Positives = 223/413 (53%), Gaps = 10/413 (2%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
+ L R+ L P S VL +W EG+ + + +L RV+R+LR RFKHAL++ EWM
Sbjct: 31 DTLGKRLLKLIYPKRSAVVVLQRWADEGRTVQKYQLNRVVRELRKYGRFKHALEICEWMR 90
Query: 97 GQG-LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDE 155
Q + DHAV LDL+ KVRGL SA +F + + K ALL+ YV+ G ++
Sbjct: 91 TQPEMRLLPGDHAVHLDLVAKVRGLASATKFFEDMPERAKGPSTCNALLHAYVQNGAREK 150
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
+ +++ +M +G AL +N +M LY TG+ E++P+++ +++ +P D +Y I +
Sbjct: 151 AEAMLAEMARVGYLTCALPFNHMMSLYMATGELERVPEMIKELRRYTLP-DLVTYNIWLT 209
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK 275
+ + S E V M+ + DW T+S + + YI AGL + L + E S+
Sbjct: 210 YCSKKDSVKSAEKVFGLMKDDCVVP-DWMTFSLLGSIYINAGLHVEGRNALVEMEKRASR 268
Query: 276 SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEK 335
K+ Y+ L++ YASL ++ + + W + +K + +Y ML SL++ ++ AE
Sbjct: 269 -KERAAYSSLLTLYASLSDRGNLDRVWNKMRGTFRKFSDTEYKCMLTSLLRFDDIAAAES 327
Query: 336 MLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGY- 394
+ EWE + D R+PN IL Y + GMI+KA++ L IV+KG P+ ++W GY
Sbjct: 328 IFSEWESTSGTRDSRIPNTILSYYIKNGMIKKAESFLDHIVEKGVKPSYSTWEAFVWGYL 387
Query: 395 ADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFV 447
DK + K ECMK+AL+ E+ W P L ++I + D+E E +
Sbjct: 388 GDKTD--KVLECMKKALSCLEK---WEPNHELATAIFSQIEKTGDIEAAEKLL 435
>gi|218195308|gb|EEC77735.1| hypothetical protein OsI_16848 [Oryza sativa Indica Group]
Length = 1300
Score = 227 bits (579), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 135/410 (32%), Positives = 223/410 (54%), Gaps = 5/410 (1%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
++LY RI+ +G + L W +++ + EL R+ R+LR +RF ALQV +WM+
Sbjct: 76 SSLYRRIA-VGHGGRPVGRTLGAWDEGERRLDKWELCRIARELRKFRRFNLALQVYDWMT 134
Query: 97 GQGLAFSVH--DHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVD 154
+ FS+ D A+QLDLI KVRG+ AE YF L D K + YG+LLN Y + + +
Sbjct: 135 ERRDRFSLSSSDMAIQLDLIAKVRGVSHAEEYFEELPDPLKDKRTYGSLLNVYAQAMMKE 194
Query: 155 ESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICI 214
++ S ++M++ G L +N +M Y + + EK+ ++ +M E V D +Y I I
Sbjct: 195 KTESTFEQMRKKGFATDTLPFNVLMNFYVDAEEAEKVSILIDEMMERNVAFDVCTYNIWI 254
Query: 215 NSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVS 274
S A + +ME V +M + +W TY+T+A+ +I G EKA LK+ E +
Sbjct: 255 KSCAAMQDADAMEQVFNQMIRDETVVANWTTYTTLASMHIKLGNSEKAEESLKEAEKRTT 314
Query: 275 KSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
++ +++L++ Y+ LG K+E+ + W K N Y +L +LV++G++E AE
Sbjct: 315 -GREKKCFHYLMTLYSHLGKKEEVYRVWNWYKATFPTIHNLGYQEVLSALVRLGDIEGAE 373
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGY 394
+ EEW +D + NI+L Y+++G + KA+ L V+KG P PN+W I+ Y
Sbjct: 374 LLYEEWASKSSSFDPKTMNILLAWYAREGFVTKAEQTLNRFVEKGGNPKPNTWEILGTAY 433
Query: 395 ADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVE 444
+A C+++A AV +K WRP+P+ V S+L + D E +
Sbjct: 434 LKDGQSSEALSCLEKATAVASPSK-WRPRPTNVESLLANFKEKNDAESAD 482
>gi|449438490|ref|XP_004137021.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 334
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 187/291 (64%), Gaps = 3/291 (1%)
Query: 160 MQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGA 219
MQKM+E+G + L+YN ++ LY + G+HEK+ ++L +M+E G+ PD F+Y I +N+Y A
Sbjct: 1 MQKMREVGFMKTPLSYNAMLNLYAHLGKHEKLAELLKEMEEMGIGPDRFTYNIRMNAYAA 60
Query: 220 RSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDA 279
S++++ME +L +ME+ ++ DW TY V N Y AGL E +I+ LKK E + +
Sbjct: 61 ASDITNMEKLLSKMEADPLVATDWHTYFVVGNGYFKAGLSENSILMLKKAEQFIGDKQKW 120
Query: 280 LGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEE 339
L Y +L++ YA++GNKDE+ + W L +K+ N Y+ ++ SL+K+ +++ AE++L+E
Sbjct: 121 LAYQYLMTLYAAIGNKDEVYRVWNLY-TNLQKRFNSGYLCIISSLMKLDDIDGAERILKE 179
Query: 340 WELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNN 399
WE +DFR+PN+++ Y KG ++KA+A + +++ GK P N+W ++A+GY
Sbjct: 180 WESGDTSFDFRIPNMMINSYCTKGFVDKAEAYINRLIETGKEPEANTWDLLASGYHSNGL 239
Query: 400 MEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL 450
K E +K+A++V + W+PK ++++ L++L N +V+ E + L
Sbjct: 240 TNKVAETLKKAISVSPPH--WKPKYHILAACLEYLKTNENVDLAEEIIGLL 288
>gi|242066836|ref|XP_002454707.1| hypothetical protein SORBIDRAFT_04g035970 [Sorghum bicolor]
gi|241934538|gb|EES07683.1| hypothetical protein SORBIDRAFT_04g035970 [Sorghum bicolor]
Length = 527
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 136/436 (31%), Positives = 227/436 (52%), Gaps = 4/436 (0%)
Query: 57 LDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWM-SGQGLAFSVHDHAVQLDLIG 115
+D+W E IS+ EL+R I LR +R++HAL++ WM S + S DHA +LDLI
Sbjct: 76 IDRWARESVHISQPELRRAIAMLRRARRYEHALEIFSWMESCNSVLLSSWDHAARLDLIA 135
Query: 116 KVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNY 175
K G AE Y+N L LL+CYV E V ++ + M +++ G ++
Sbjct: 136 KAYGTSQAEEYYNKLQSPAARQAASFPLLHCYVTERNVQKAETFMAQLQSCGLPVDPHSF 195
Query: 176 NGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMES 235
N IM LY T Q+EK V+ MK N +P + SY + +N S ++ +++V QEM +
Sbjct: 196 NEIMKLYIATFQYEKALSVIDLMKRNNIPRNVLSYNLWMNVCAEVSGVAPVQSVFQEMLN 255
Query: 236 QSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNK 295
+ + W TY T+AN + GL KA L+K E +S + LGY+ +++ YA+L +
Sbjct: 256 DETVEVGWSTYCTLANIFRKNGLNTKAQACLRKAETKLSPT-GRLGYSFVMTCYAALNDS 314
Query: 296 DEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNII 355
D +M+ W K + +Y+T + +K+G++ +AE + WE C +D RV N++
Sbjct: 315 DGVMRLWEASKSVPGRIPAANYMTAMLCSIKVGDISQAEWIFGSWEAGCRKHDVRVSNVL 374
Query: 356 LLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHE 415
L Y + IEKA+ + +++KG P +W I+ GY M+KA CMK+ L++
Sbjct: 375 LGAYVRNRWIEKAERLHLHMLEKGARPNYKTWEILMEGYVQSRQMDKAVGCMKKGLSLL- 433
Query: 416 ENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL-KIKVQKRNMYHALTEAHIRSGQEV 474
++ WRP L+ +I + ++ ++ L + + +Y +L A+I +
Sbjct: 434 KSCHWRPPLELMEAIGKHFEEQGSADDAYRYIKVLQRFNLTSLPLYKSLIRAYINADIVP 493
Query: 475 DGLLESMKADDIDEDK 490
+LE + D I D+
Sbjct: 494 PNILEMIAKDQIVTDE 509
>gi|18411800|ref|NP_567220.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75163252|sp|Q93WC5.1|PP300_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g01990, mitochondrial; Flags: Precursor
gi|14517494|gb|AAK62637.1| AT4g01990/T7B11_26 [Arabidopsis thaliana]
gi|16323354|gb|AAL15390.1| AT4g01990/T7B11_26 [Arabidopsis thaliana]
gi|332656708|gb|AEE82108.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 502
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 144/468 (30%), Positives = 249/468 (53%), Gaps = 13/468 (2%)
Query: 14 RNFTKT----NLEIFTRAYRAVKPVARNN--LYSRISPLGDPDVS-LTPVLDQWVLEGQK 66
R F T EI A +V A+ + +Y ++S LG + L+Q+V+EG
Sbjct: 10 RRFCATLATATAEISGEAAASVPTKAKKHRSIYKKLSSLGTRGGGKMEETLNQFVMEGVP 69
Query: 67 ISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETY 126
+ + +L R + LR ++ + AL++ EWM + +AF+ DHA++L+LI K +GLE+AETY
Sbjct: 70 VKKHDLIRYAKDLRKFRQPQRALEIFEWMERKEIAFTGSDHAIRLNLIAKSKGLEAAETY 129
Query: 127 FNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTG 186
FNSL+D K YG+LLNCY E ++ + + M ++ ++L +N +M +Y G
Sbjct: 130 FNSLDDSIKNQSTYGSLLNCYCVEKEEVKAKAHFENMVDLNHVSNSLPFNNLMAMYMGLG 189
Query: 187 QHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTY 246
Q EK+P +++ MKE + P + +Y + I S G+ +L +E VL EM+++ W T+
Sbjct: 190 QPEKVPALVVAMKEKSITPCDITYSMWIQSCGSLKDLDGVEKVLDEMKAEGEGIFSWNTF 249
Query: 247 STVANYYIIAGLKEKAIIYLKKCEDIVSKS-KDALGYNHLISHYASLGNKDEMMKFWGLQ 305
+ +A YI GL KA LK E+ ++ +D Y+ LI+ Y + N E+ + W L
Sbjct: 250 ANLAAIYIKVGLYGKAEEALKSLENNMNPDVRDC--YHFLINLYTGIANASEVYRVWDLL 307
Query: 306 KIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMI 365
K + N Y+TML +L K+ +++ +K+ EWE +C+ YD R+ N+ + Y ++ M
Sbjct: 308 KKRYPNVNNSSYLTMLRALSKLDDIDGVKKVFAEWESTCWTYDMRMANVAISSYLKQNMY 367
Query: 366 EKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPS 425
E+A+AV +KK K + ++ + + A + + AV +++K W
Sbjct: 368 EEAEAVFNGAMKKCKGQFSKARQLLMMHLLKNDQADLALKHFEA--AVLDQDKNWTWSSE 425
Query: 426 LVSSILDWLGDNRDVEEVEAFVSSL-KIKVQKRNMYHALTEAHIRSGQ 472
L+SS + +DV+ E F +L K Y L + ++ +G+
Sbjct: 426 LISSFFLHFEEAKDVDGAEEFCKTLTKWSPLSSETYTLLMKTYLAAGK 473
>gi|4558568|gb|AAD22661.1|AC007138_25 hypothetical protein [Arabidopsis thaliana]
gi|7268583|emb|CAB80692.1| hypothetical protein [Arabidopsis thaliana]
Length = 501
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 144/468 (30%), Positives = 249/468 (53%), Gaps = 13/468 (2%)
Query: 14 RNFTKT----NLEIFTRAYRAVKPVARNN--LYSRISPLGDPDVS-LTPVLDQWVLEGQK 66
R F T EI A +V A+ + +Y ++S LG + L+Q+V+EG
Sbjct: 9 RRFCATLATATAEISGEAAASVPTKAKKHRSIYKKLSSLGTRGGGKMEETLNQFVMEGVP 68
Query: 67 ISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETY 126
+ + +L R + LR ++ + AL++ EWM + +AF+ DHA++L+LI K +GLE+AETY
Sbjct: 69 VKKHDLIRYAKDLRKFRQPQRALEIFEWMERKEIAFTGSDHAIRLNLIAKSKGLEAAETY 128
Query: 127 FNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTG 186
FNSL+D K YG+LLNCY E ++ + + M ++ ++L +N +M +Y G
Sbjct: 129 FNSLDDSIKNQSTYGSLLNCYCVEKEEVKAKAHFENMVDLNHVSNSLPFNNLMAMYMGLG 188
Query: 187 QHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTY 246
Q EK+P +++ MKE + P + +Y + I S G+ +L +E VL EM+++ W T+
Sbjct: 189 QPEKVPALVVAMKEKSITPCDITYSMWIQSCGSLKDLDGVEKVLDEMKAEGEGIFSWNTF 248
Query: 247 STVANYYIIAGLKEKAIIYLKKCEDIVSKS-KDALGYNHLISHYASLGNKDEMMKFWGLQ 305
+ +A YI GL KA LK E+ ++ +D Y+ LI+ Y + N E+ + W L
Sbjct: 249 ANLAAIYIKVGLYGKAEEALKSLENNMNPDVRDC--YHFLINLYTGIANASEVYRVWDLL 306
Query: 306 KIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMI 365
K + N Y+TML +L K+ +++ +K+ EWE +C+ YD R+ N+ + Y ++ M
Sbjct: 307 KKRYPNVNNSSYLTMLRALSKLDDIDGVKKVFAEWESTCWTYDMRMANVAISSYLKQNMY 366
Query: 366 EKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPS 425
E+A+AV +KK K + ++ + + A + + AV +++K W
Sbjct: 367 EEAEAVFNGAMKKCKGQFSKARQLLMMHLLKNDQADLALKHFEA--AVLDQDKNWTWSSE 424
Query: 426 LVSSILDWLGDNRDVEEVEAFVSSL-KIKVQKRNMYHALTEAHIRSGQ 472
L+SS + +DV+ E F +L K Y L + ++ +G+
Sbjct: 425 LISSFFLHFEEAKDVDGAEEFCKTLTKWSPLSSETYTLLMKTYLAAGK 472
>gi|255559466|ref|XP_002520753.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540138|gb|EEF41715.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 551
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 144/456 (31%), Positives = 244/456 (53%), Gaps = 8/456 (1%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
+ L RI L S + +W EG K+ + +L R++R+LR KR+KHAL+V EWM+
Sbjct: 36 DTLGRRIFSLVYSKRSAVIAIRKWKTEGHKVQKYQLNRIVRELRKMKRYKHALEVCEWMT 95
Query: 97 GQG-LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDE 155
+ L D+AV LDL+ KVRGL SAE +F L DE + + ALL+ YV+ V +
Sbjct: 96 QERELKLLPGDYAVHLDLVAKVRGLTSAEKFFEDLPDEMRGWQTCTALLHTYVKCKDVVK 155
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
+ +LM+KM++ + L YN ++ LY G+ +K ++ ++K++ PD ++ + ++
Sbjct: 156 AEALMEKMRDCSFVKNPLPYNHMISLYIADGEFDKAKRIVEELKKS-TTPDVVTFNLWLS 214
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK 275
+ +++ S + V + I DW TYST+ N Y+ L E A+ LK+ E S+
Sbjct: 215 MCASLNDVESAKKV-LLELKKLKIEADWITYSTLTNLYLKNKLLEDAVSTLKEMEKRASR 273
Query: 276 SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEK 335
K+ L Y+ L+S Y ++G+KD + + W K K + +Y ML SL+K+ E+E+AE
Sbjct: 274 -KNRLAYSSLLSLYTNMGDKDAVHRIWNKMKSLFCKMNDAEYTCMLSSLIKLEEIEKAEN 332
Query: 336 MLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYA 395
+ EWE D +V NI+L Y + IE ++ + +V+KG P +W ++ G+
Sbjct: 333 LYTEWESVSGTGDPQVANILLAAYINRNQIEDSENFYRRMVEKGVCPCYTTWELLTWGHL 392
Query: 396 DKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK-IKV 454
MEK +C K+A+ + K W P LV + L + + E E F+ L+
Sbjct: 393 KTKQMEKVLDCFKKAITI---VKTWSPDKRLVREVFKILEEKGNAEGAEEFLVMLRNAGY 449
Query: 455 QKRNMYHALTEAHIRSGQEVDGLLESMKADDIDEDK 490
+Y++L + ++G+ + E MK D ++ D+
Sbjct: 450 VSTEIYNSLLRTYAKAGKMPLIVTERMKKDGVELDE 485
>gi|147803609|emb|CAN75355.1| hypothetical protein VITISV_002476 [Vitis vinifera]
Length = 736
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 135/370 (36%), Positives = 208/370 (56%), Gaps = 8/370 (2%)
Query: 85 FKHAL-QVSEWMSGQGLAF--SVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYG 141
F AL +V EWM+ +G F S D A+QLDLI KV G+ SAE YF+ L D K ++YG
Sbjct: 314 FVEALYKVYEWMNNRGERFRLSSSDAAIQLDLIAKVCGVSSAEDYFSRLPDTLKDKRIYG 373
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
ALLN YV+ + D++ L++K++ G + L +N +M LY N + +K+ ++ +M
Sbjct: 374 ALLNAYVQAKMRDKAEILIEKLRNKGYATTPLPFNVMMTLYMNLKELDKVQSMISEMMNK 433
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
+ D +SY I ++S + ME V ++M+ + I+ +W T+ST+A YI G EK
Sbjct: 434 NIQLDIYSYNIWLSSCESTER---MEQVFEQMKLERTINPNWTTFSTMATMYIKLGQFEK 490
Query: 262 AIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITML 321
A LKK E ++ ++D + Y++LIS Y S GNK E+ + W + K K N Y ++
Sbjct: 491 AEECLKKVESRIT-NRDRMPYHYLISLYGSTGNKAEVYRAWNIYKSKFPNIPNLGYHALI 549
Query: 322 GSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKT 381
SLV++G+LE AEK+ EEW YD R+ N++L Y ++G +EKA+ L +++ G
Sbjct: 550 SSLVRVGDLEGAEKIYEEWLSVKSSYDPRIGNLLLGCYVKEGFLEKAEGFLDHMIEAGGK 609
Query: 382 PTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVE 441
P +W I+A G + A C K A+ N W+PKP VS+ LD + D
Sbjct: 610 PNSTTWEILAEGNTGVKKISDALSCFKRAVLAEGSNG-WKPKPVNVSAFLDLCEEEADTA 668
Query: 442 EVEAFVSSLK 451
EA + L+
Sbjct: 669 TKEALMGLLR 678
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 32 KPVAR-NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQ 90
+P+ + N +Y RIS + +P++ VL+QW EG+++++ EL RV+++LR KRFK AL+
Sbjct: 52 RPLVKWNAVYRRISLMENPEMGSASVLNQWENEGKRLTKWELCRVVKELRKFKRFKMALE 111
Query: 91 VS 92
++
Sbjct: 112 LT 113
>gi|293336604|ref|NP_001168600.1| uncharacterized protein LOC100382384 [Zea mays]
gi|223949449|gb|ACN28808.1| unknown [Zea mays]
Length = 536
Score = 221 bits (563), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 139/514 (27%), Positives = 251/514 (48%), Gaps = 55/514 (10%)
Query: 27 AYRAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFK 86
A R+ K LY R+ G ++ +D ++ ++ + E+ +R++R ++
Sbjct: 9 ARRSTKKYVEEALYRRLFRKGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRRMRRNALYR 68
Query: 87 HALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNC 146
+L++SE M+ +G+ +V D A++LDLI K RG+ +AE YF L + K YGALLN
Sbjct: 69 PSLKLSEVMARRGMNPTVSDQAIRLDLIAKSRGIAAAEKYFLDLPETSKTHLTYGALLNS 128
Query: 147 YVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPD 206
Y +E + +++ SLM+KMKE+ +A+++N +M +YT Q EK+P ++ DMK + V PD
Sbjct: 129 YCKELMTEKAESLMEKMKELNFAFTAMSFNSLMTMYTKVNQAEKVPSIIQDMKADDVLPD 188
Query: 207 NFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYL 266
F+Y + + + A ++ +E V++EM+ ++ DW TYS +A+ Y+ AG+ EKA L
Sbjct: 189 VFTYNVWMRALAALKDIPGVERVIEEMKRDGRVAPDWTTYSNLASIYVEAGMFEKAEAAL 248
Query: 267 KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVK 326
K+ E + S D Y LI+ Y N E+ + W K + N Y+ M+ L
Sbjct: 249 KELEK-RNTSNDIEAYQFLITLYGRTQNLVEVHRVWRSLKRDNPRMANMSYLNMIQVLAN 307
Query: 327 IGEL-------------------------------------------------EEAEKML 337
+ +L E ++
Sbjct: 308 LKDLSAAEACFKEWEARHIHPPKTNTKGSGADNTPGADPKSPSNPPNNQSGTKETGDETA 367
Query: 338 EEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADK 397
E+ + YD RV N ++ Y +GM++KA A+ K +G +W I Y
Sbjct: 368 EDLQPKHPKYDIRVANAMIKAYITEGMLDKAVAMKKRAKMRGGRLNAKTWEIFMEHYLKT 427
Query: 398 NNMEKAFECMKEALAV-HEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQK 456
+++ A C A+ H + W P P++ +++ + +N+DV+ E +V +LK KVQK
Sbjct: 428 GDLKMAHWCADRAMKKGHSSGRIWVPPPAVTETLMSYFEENKDVDGAERYVGALK-KVQK 486
Query: 457 ---RNMYHALTEAHIRSGQEVDGLLESMKADDID 487
++ L + +G++ G+ + +K ++++
Sbjct: 487 DLGAPVFEPLVRTYAAAGKKFPGMRQRLKIENVE 520
>gi|242091818|ref|XP_002436399.1| hypothetical protein SORBIDRAFT_10g001830 [Sorghum bicolor]
gi|241914622|gb|EER87766.1| hypothetical protein SORBIDRAFT_10g001830 [Sorghum bicolor]
Length = 536
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 143/514 (27%), Positives = 246/514 (47%), Gaps = 55/514 (10%)
Query: 27 AYRAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFK 86
A R+ K LY R+ G ++ +D ++ ++ + E+ +R++R ++
Sbjct: 9 ARRSTKKYVEEALYRRLFRKGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRRMRRNALYR 68
Query: 87 HALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNC 146
AL++SE M+ +G+ +V D A+ LDLI K RG+ +AE YF L + K YGALLN
Sbjct: 69 PALKLSEVMTRRGMNPTVSDQAICLDLIAKSRGIAAAEKYFLDLPETSKTHLTYGALLNS 128
Query: 147 YVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPD 206
Y +E + +++ SLM KM E+ +A+ +N +M +YT Q EK+P ++ MK + V P
Sbjct: 129 YCKELMTEKAESLMAKMSELNFAFTAMPFNSLMTMYTKVNQPEKVPGIIQYMKADDVLPH 188
Query: 207 NFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYL 266
F+Y + + + A +++ +E V++EM+ ++ DW TYS +A+ Y+ AGL EKA L
Sbjct: 189 VFTYNVWMRALAALNDIPGVERVIEEMKRDGRVAPDWTTYSNLASIYVDAGLFEKAEAAL 248
Query: 267 KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVK 326
K+ E + S D Y LI+ Y N E+ + W K + N Y+ M+ L
Sbjct: 249 KELEK-RNTSNDVEAYQFLITLYGRTQNLVEVHRVWRSLKRNNPRMANMSYLNMIQVLAN 307
Query: 327 IGELEEAEKMLEEWE--------------------------------------------- 341
+ +L AE +EWE
Sbjct: 308 LKDLPAAEACFKEWEARHIHPPKTKAKDSGADNISTTDPESSSNLPNNQSGIKETGDEAA 367
Query: 342 ----LSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADK 397
L YD RV N ++ Y +GM++KA AV K G +W I +
Sbjct: 368 KDLQLKHPKYDIRVANAMIKAYIAEGMLDKAVAVKKRAKMHGGRLNAKTWEIFMEHHLKT 427
Query: 398 NNMEKAFECMKEALAV-HEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQK 456
+++ A C A+ H + W P P++ +++ + +N+DV+ E +V SLK KVQK
Sbjct: 428 GDLKMAHWCADRAMKKGHSSGRIWVPPPAVTETLMSYFEENKDVDGAEQYVESLK-KVQK 486
Query: 457 ---RNMYHALTEAHIRSGQEVDGLLESMKADDID 487
++ L + +G++ G+ + +K ++++
Sbjct: 487 DLGTPVFEPLLRTYAAAGKKFPGMRQRLKIENVE 520
>gi|413953408|gb|AFW86057.1| hypothetical protein ZEAMMB73_674343 [Zea mays]
Length = 596
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 140/514 (27%), Positives = 251/514 (48%), Gaps = 55/514 (10%)
Query: 27 AYRAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFK 86
A R+ K LY R+ G ++ +D ++ ++ + E+ +R++R ++
Sbjct: 69 ARRSTKKYVEEALYRRLFRKGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRRMRRNALYR 128
Query: 87 HALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNC 146
+L++SE M+ +G+ +V D A++LDLI K RG+ +AE YF L + K YGALLN
Sbjct: 129 PSLKLSEVMARRGMNPTVSDQAIRLDLIAKSRGIAAAEKYFLDLPETSKTHLTYGALLNS 188
Query: 147 YVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPD 206
Y +E + +++ SLM+KMKE+ +A+++N +M +YT Q EK+P ++ DMK + V PD
Sbjct: 189 YCKELMTEKAESLMEKMKELNFAFTAMSFNSLMTMYTKVNQAEKVPSIIQDMKADDVLPD 248
Query: 207 NFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYL 266
F+Y + + + A ++ +E V++EM+ ++ DW TYS +A+ Y+ AG+ EKA L
Sbjct: 249 VFTYNVWMRALAALKDIPGVERVIEEMKRDGRVAPDWTTYSNLASIYVEAGMFEKAEAAL 308
Query: 267 KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVK 326
K+ E + S D Y LI+ Y N E+ + W K + N Y+ M+ L
Sbjct: 309 KELEK-RNTSNDIEAYQFLITLYGRTQNLVEVHRVWRSLKRDNPRMANMSYLNMIQVLAN 367
Query: 327 IGELEEAEKMLEEWEL----------------SCYCYDFRVP------------------ 352
+ +L AE +EWE + D + P
Sbjct: 368 LKDLSAAEACFKEWEARHIHPPKTNTKGSGADNTPGADPKSPSNPPNNQSGTKETGDETA 427
Query: 353 ---------------NIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADK 397
N ++ Y +GM++KA A+ K +G +W I Y
Sbjct: 428 EDLQPKHPKYDIRVANAMIKAYITEGMLDKAVAMKKRAKMRGGRLNAKTWEIFMEHYLKT 487
Query: 398 NNMEKAFECMKEALAV-HEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQK 456
+++ A C A+ H + W P P++ +++ + +N+DV+ E +V +LK KVQK
Sbjct: 488 GDLKMAHWCADRAMKKGHSSGRIWVPPPAVTETLMSYFEENKDVDGAERYVGALK-KVQK 546
Query: 457 ---RNMYHALTEAHIRSGQEVDGLLESMKADDID 487
++ L + +G++ G+ + +K ++++
Sbjct: 547 DLGAPVFEPLVRTYAAAGKKFPGMRQRLKIENVE 580
>gi|297843032|ref|XP_002889397.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335239|gb|EFH65656.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 524
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 131/415 (31%), Positives = 226/415 (54%), Gaps = 5/415 (1%)
Query: 39 LYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQ 98
LY ++S L ++ L+Q+++EG + +++L R + LR +R +HAL++ +WM +
Sbjct: 60 LYKKLSKLSVAGGTVAETLNQFIMEGITVRKVDLFRCAKDLRKFRRHQHALEIFDWMEKR 119
Query: 99 GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDK-LYGALLNCYVREGLVDESL 157
+ FSV DHA++LDLI K +GLE+AE YFN+L+ K + YGAL+NCY E ++
Sbjct: 120 KMTFSVSDHAIRLDLIAKAKGLEAAENYFNNLDPSAKNHQSTYGALMNCYCVELEEGKAK 179
Query: 158 SLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSY 217
+ +KM E+ ++L +N +M +Y Q EK+P ++ MK+ G+ P +Y I + S
Sbjct: 180 AHFEKMDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAMKQRGISPCGVTYSIWMQSC 239
Query: 218 GARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVS-KS 276
G+ ++L +E ++ EM S W T+S +A + AGL EKA LK E ++ +
Sbjct: 240 GSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIFTKAGLYEKAESALKSMEKKMNPNN 299
Query: 277 KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKM 336
+D+ ++ LIS YA + E+ + W K + N Y+ ML ++ K+G+++ +K+
Sbjct: 300 RDS--HHFLISLYAGISKGTEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDIDGIKKI 357
Query: 337 LEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYAD 396
EWE C+ YD R+ NI + Y + M E+A+ +L ++K K P + ++ +
Sbjct: 358 FTEWESKCWAYDMRLANIAINTYLKGNMYEEAEKILDGAMEKSKGPFSKARQLLMIHLLE 417
Query: 397 KNNMEKAFECMKEALAVHEENK-FWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL 450
+ A + ++ A++ ENK W LVS +DV+ E F L
Sbjct: 418 NGKADLAMKHLETAVSDPAENKDEWSWSSELVSLFFLHFKRAKDVDGAEDFCKIL 472
>gi|356510143|ref|XP_003523799.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Glycine max]
Length = 530
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 146/473 (30%), Positives = 252/473 (53%), Gaps = 22/473 (4%)
Query: 25 TRAYRAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKR 84
+RA P+AR + SPL P L WV EG +S EL+R+ R L K
Sbjct: 51 SRASAFHVPLARKLKSRKQSPL--------PALKNWVDEGNDVSHSELRRIARTLVKSKC 102
Query: 85 FKHALQVSEWMSGQ-GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGAL 143
+ HAL+V +W+ Q D+A++L+LI + L AE YF +L D L
Sbjct: 103 YHHALEVVKWIENQKNFHMIPADYAMKLELIIENYDLMEAEEYFMNLPDSAAKKAACLTL 162
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
L Y+R +++ + M K+ E+G S +N +M LY T ++ K+P V+ MK N V
Sbjct: 163 LRGYIRVRDTNKAETFMVKLYELGLVLSPHPFNEMMKLYLATCEYRKVPLVMQQMKRNKV 222
Query: 204 PPDNFSYRICINS------YGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
P + SY + +N+ YG ++++E V ++M++ ++ + W + +T+AN Y AG
Sbjct: 223 PCNVLSYNLWMNACTEEEGYG----VAAVETVFRQMQNDRNVEVGWSSLATLANAYKKAG 278
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
+KAI+ LK E +S + LGY LI+ YASL K+ +++ W K + +Y
Sbjct: 279 QSKKAILVLKDAERKLSTC-NRLGYFFLITLYASLKEKEGVLRLWEASKAVGGRISCANY 337
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
I +L LVK+G++ +A+++ EWE +C YD RV N++L Y++ G +E+A+++ ++
Sbjct: 338 ICILICLVKLGDIVQAKRIFLEWESNCQKYDIRVSNVLLGAYARNGSMEEAESLHLHTLQ 397
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDN 437
KG P + I+ GY + M++A MK ALA+ ++ WRP LV +I ++L +
Sbjct: 398 KGGCPNYKTLEILMEGYVNWQKMDEAIITMKRALAMMKDCH-WRPPHGLVLAIAEYLEKD 456
Query: 438 RDVEEVEAFVSSLK-IKVQKRNMYHALTEAHIRSGQEVDGLLESMKADDIDED 489
+++ +++ L+ + ++Y L H+ + + +L+ M D I+ D
Sbjct: 457 GNLKYANKYITDLRNFGLFSLSLYKILLRMHLSANKPPFHILKMMDEDKIEMD 509
>gi|343172214|gb|AEL98811.1| pentatricopeptide repeat-containing protein, partial [Silene
latifolia]
Length = 359
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/358 (32%), Positives = 206/358 (57%), Gaps = 2/358 (0%)
Query: 85 FKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALL 144
+ AL++S+ M+ +G+ ++ D A+ LDLIGK G+ +AE YF L + K + YGALL
Sbjct: 1 YYAALKLSDTMAWKGMNMTISDQAIHLDLIGKTHGVAAAENYFIDLPESSKNIECYGALL 60
Query: 145 NCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVP 204
N Y +E + D++ +LM+KMKE+G +A++YN +M LY+ TG EK+P ++ +MK + +
Sbjct: 61 NIYCKELIPDKAEALMEKMKELGLPITAMSYNSLMTLYSKTGLPEKVPALVQEMKASDIM 120
Query: 205 PDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAII 264
++Y + + + A ++ +E VL EM+ ++ DW TYS +A+ Y+ + + EKA
Sbjct: 121 LQTYTYNVWMRALAAVKDIYGVERVLDEMKRDGRVAEDWTTYSNLASIYVESKMFEKAEN 180
Query: 265 YLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSL 324
LK+ E + S+D Y L++ Y GN E+ + W ++ K N Y+ M+ L
Sbjct: 181 ALKELEK-RNTSQDLSPYQFLLTLYGKTGNLIEVYRVWRSLRLAFPKTPNVAYLNMIQRL 239
Query: 325 VKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTP 384
V + +L+ AEK +WE SC YD R+ N+++ Y + G++++A + K K+G P
Sbjct: 240 VTLKDLKGAEKCFADWESSCTNYDIRIANVLMGAYIKDGLLQQAKELKKRACKRGAKPNA 299
Query: 385 NSWSIIAAGYADKNNMEKAFECMKEALAVHE-ENKFWRPKPSLVSSILDWLGDNRDVE 441
+W I Y ++ A +C++ A+A+ + W P +V+SI+ ++DV+
Sbjct: 300 KTWEIFLEHYLKAGEVKLAVDCVERAVAIGRGDGSKWVPSSKVVNSIMGHFEQSKDVD 357
>gi|223974825|gb|ACN31600.1| unknown [Zea mays]
Length = 515
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 132/452 (29%), Positives = 250/452 (55%), Gaps = 6/452 (1%)
Query: 39 LYSRISPLGDP-DVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWM-S 96
LY R+S LG + S++ VL++WV EG +L + +++LR KR HAL++ +WM +
Sbjct: 50 LYRRLSALGSAGEGSVSRVLNKWVREGGATRSDDLVKHVKELRKYKRHAHALELMDWMVN 109
Query: 97 GQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDES 156
+G+ S +HA++L+LI KVRGLE+AE YF +L D K + YG+LL+CY + +++
Sbjct: 110 ARGMNMSHTNHAIRLELIYKVRGLEAAENYFANLPDPAKNHRTYGSLLSCYCSAKMEEKA 169
Query: 157 LSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINS 216
+L ++M E+G + S L N +M LY Q+ K+ + +MK V P++ + I + S
Sbjct: 170 TNLYRQMDELGIWSSTLPINNLMSLYMKLDQYRKVVSLFEEMKLKNVKPNSLTCCILMTS 229
Query: 217 YGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS 276
Y A +++ +E +L+EM + +++ W YST+A+ Y+ AG KA LKK E ++S
Sbjct: 230 YAALNKIDDIEELLKEM-VEKDVTLGWSAYSTLASIYVNAGQFGKAESALKKLEGLISAH 288
Query: 277 KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKM 336
D ++ L+S YASLGN E+ + W + K K K N Y+ ML +L K+ +++ +++
Sbjct: 289 DDRQPFDFLLSLYASLGNLSEVNRVWNVIKSKFSKVTNTSYLGMLHALYKLNDIDRMKQI 348
Query: 337 LEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYAD 396
EWE + +D ++ N+++ + + GM E+A+ +++++ + G + + Y
Sbjct: 349 YMEWESNYETFDVKLTNMMIRSHLKVGMTEEAEMLVEKVKENGAEFDTKTCELFLDHYMG 408
Query: 397 KNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK-IKVQ 455
+M A ++ + + K + + + +++D + E F + L+ +
Sbjct: 409 TEDMNSALNWLENMTKLSK--KAEKLDQDRIYKFQKYFEEHKDADGAERFCNCLRTLGCI 466
Query: 456 KRNMYHALTEAHIRSGQEVDGLLESMKADDID 487
Y +L ++ +G++ L + +K D ++
Sbjct: 467 DGKAYESLLRTYLAAGKKSCSLRQQIKNDKVE 498
>gi|15217734|ref|NP_171739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173342|sp|Q9FZ24.1|PPR4_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g02370, mitochondrial; Flags: Precursor
gi|9857533|gb|AAG00888.1|AC064879_6 Hypothetical protein [Arabidopsis thaliana]
gi|332189300|gb|AEE27421.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 137/439 (31%), Positives = 235/439 (53%), Gaps = 11/439 (2%)
Query: 15 NFTKTNLEIFTRAYRAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQR 74
N +T++ T A R + LY ++S L ++ L+Q+++EG + + +L R
Sbjct: 55 NGVRTSVAAPTVASR------QRELYKKLSMLSVTGGTVAETLNQFIMEGITVRKDDLFR 108
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+ LR +R +HA ++ +WM + + FSV DHA+ LDLIGK +GLE+AE YFN+L+
Sbjct: 109 CAKTLRKFRRPQHAFEIFDWMEKRKMTFSVSDHAICLDLIGKTKGLEAAENYFNNLDPSA 168
Query: 135 KVDK-LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPD 193
K + YGAL+NCY E +++ + + M E+ ++L +N +M +Y Q EK+P
Sbjct: 169 KNHQSTYGALMNCYCVELEEEKAKAHFEIMDELNFVNNSLPFNNMMSMYMRLSQPEKVPV 228
Query: 194 VLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYY 253
++ MK+ G+ P +Y I + S G+ ++L +E ++ EM S W T+S +A Y
Sbjct: 229 LVDAMKQRGISPCGVTYSIWMQSCGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIY 288
Query: 254 IIAGLKEKAIIYLKKCEDIVS-KSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQ 312
AGL EKA LK E+ ++ ++D+ ++ L+S YA + E+ + W K +
Sbjct: 289 TKAGLYEKADSALKSMEEKMNPNNRDS--HHFLMSLYAGISKGPEVYRVWESLKKARPEV 346
Query: 313 LNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
N Y+ ML ++ K+G+L+ +K+ EWE C+ YD R+ NI + Y + M E+A+ +L
Sbjct: 347 NNLSYLVMLQAMSKLGDLDGIKKIFTEWESKCWAYDMRLANIAINTYLKGNMYEEAEKIL 406
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENK-FWRPKPSLVSSIL 431
+KK K P + ++ + + + A + ++ A++ ENK W LVS
Sbjct: 407 DGAMKKSKGPFSKARQLLMIHLLENDKADLAMKHLEAAVSDSAENKDEWGWSSELVSLFF 466
Query: 432 DWLGDNRDVEEVEAFVSSL 450
+DV+ E F L
Sbjct: 467 LHFEKAKDVDGAEDFCKIL 485
>gi|343172216|gb|AEL98812.1| pentatricopeptide repeat-containing protein, partial [Silene
latifolia]
Length = 359
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 115/358 (32%), Positives = 207/358 (57%), Gaps = 2/358 (0%)
Query: 85 FKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALL 144
+ AL++S+ M+ +G+ +++D A+ LDLIGK G+ +AE YF L + K + YGALL
Sbjct: 1 YYAALKLSDTMAWKGMNMTINDQAIHLDLIGKTHGVAAAENYFIDLPESSKNIECYGALL 60
Query: 145 NCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVP 204
N Y +E + D++ +LM+KMKE+G +A++YN +M LY+ TG EK+P ++ +MK + +
Sbjct: 61 NIYCKELIPDKAEALMEKMKELGLPITAMSYNSLMTLYSKTGLPEKVPALVQEMKASDIM 120
Query: 205 PDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAII 264
++Y + + + A ++ +E VL EM+ ++ DW TYS +A+ Y+ + + +KA
Sbjct: 121 LQTYTYNVWMRALAAVKDIYGVERVLDEMKRDGRVAEDWTTYSNLASIYVESKMFDKAEN 180
Query: 265 YLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSL 324
LK+ E + S++ Y L++ Y GN E+ + W ++ K N Y+ M+ L
Sbjct: 181 ALKELEK-RNTSRELSPYQFLLTLYGKTGNLIEVYRLWRSLRLAFPKTPNVAYLNMIQRL 239
Query: 325 VKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTP 384
V + +L+ AEK +WE SC YD R+ N+++ Y + G +++A + K K+G P
Sbjct: 240 VTLKDLKGAEKCFADWESSCTNYDIRIANVLMGAYIKDGSLQQAKELKKRACKRGAKPNA 299
Query: 385 NSWSIIAAGYADKNNMEKAFECMKEALAVHE-ENKFWRPKPSLVSSILDWLGDNRDVE 441
+W I Y ++ A +C++ A+A+ + W P ++V+SI+ ++DV+
Sbjct: 300 KTWEIFLEHYLKAGEVKLAVDCVERAVAIGRGDGSKWVPSTNVVNSIMGHFEQSKDVD 357
>gi|226533322|ref|NP_001142217.1| uncharacterized protein LOC100274385 [Zea mays]
gi|194707648|gb|ACF87908.1| unknown [Zea mays]
gi|414870857|tpg|DAA49414.1| TPA: hypothetical protein ZEAMMB73_857299 [Zea mays]
Length = 472
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 132/404 (32%), Positives = 219/404 (54%), Gaps = 8/404 (1%)
Query: 90 QVSEWMSGQ-GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYV 148
Q+S WM+ + L SV D A +LDLI KV GLE A YF + + + + YG+LL CYV
Sbjct: 48 QLSFWMTDRRHLHLSVGDVAYRLDLISKVHGLEKAVEYFGMVPKQLRKPQCYGSLLKCYV 107
Query: 149 REGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNF 208
VD++ KM+EMG S+ Y +M LY TGQ E++ + DM+E GV PD F
Sbjct: 108 EAKAVDKAEEHFAKMQEMG-MTSSYAYTWMMKLYLQTGQLERVHAMFQDMEEKGVKPDTF 166
Query: 209 SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKK 268
S + +Y A ++ + VL + + + W +++ A+ ++ +G++ A++ L +
Sbjct: 167 SVEAMLAAYIAAEDVQGVGKVLDKANPHEKL-VTWHGHASAASLFMKSGMQVGAVMALVE 225
Query: 269 CEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIG 328
E +S + Y L+ Y LG E + W + K K N Y++ L +L++
Sbjct: 226 AERRISPKSSRIAYAFLLKTYTELGMHAEAGRIWSVYKSKVPP-CNTMYMSRLSALLRTN 284
Query: 329 ELEEAEKMLEEWELSCYCY-DFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSW 387
+++ AE L+EWE Y DFR+ N+++ Y ++G++EKA A++ +KKG+TP N+W
Sbjct: 285 DIDGAEATLKEWETVPLRYHDFRLINVMVDAYCREGLVEKAVALVDGAIKKGRTPYANTW 344
Query: 388 SIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFV 447
+A G+ + +A + ++AL WRP + V L+ D +DV E V
Sbjct: 345 YKLAGGFFKTGQVPEAVDMTRKAL--DSATPPWRPDLANVLMSLNHFVDQKDVGAAEEMV 402
Query: 448 SSL-KIKVQKRNMYHALTEAHIRSGQEVDGLLESMKADDIDEDK 490
S+L K+ R++YH L + ++R+G+ LLE MK D ++ D+
Sbjct: 403 STLQKLVPLTRDVYHCLLKTYVRAGKPPSDLLERMKEDGLEADE 446
>gi|17529324|gb|AAL38889.1| unknown protein [Arabidopsis thaliana]
Length = 537
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 136/439 (30%), Positives = 235/439 (53%), Gaps = 11/439 (2%)
Query: 15 NFTKTNLEIFTRAYRAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQR 74
N +T++ T A R + LY ++S L ++ L+Q+++EG + + +L R
Sbjct: 55 NGVRTSVAAPTVASR------QRELYKKLSMLSVTGGTVAETLNQFIMEGITVRKDDLFR 108
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+ LR +R +HA ++ +WM + + FSV DHA+ LDLIGK +GLE+AE YFN+L+
Sbjct: 109 CAKTLRKFRRPQHAFEIFDWMEKRKMTFSVSDHAICLDLIGKTKGLEAAENYFNNLDPSA 168
Query: 135 KVDK-LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPD 193
K + YGAL+NCY E +++ + + M E+ ++L +N +M +Y Q EK+P
Sbjct: 169 KNHQSTYGALMNCYCVELEEEKAKAHFEIMDELNFVNNSLPFNNMMSMYMRLSQPEKVPV 228
Query: 194 VLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYY 253
++ +K+ G+ P +Y I + S G+ ++L +E ++ EM S W T+S +A Y
Sbjct: 229 LVDAIKQRGISPCGVTYSIWMQSCGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIY 288
Query: 254 IIAGLKEKAIIYLKKCEDIVS-KSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQ 312
AGL EKA LK E+ ++ ++D+ ++ L+S YA + E+ + W K +
Sbjct: 289 TKAGLYEKADSALKSMEEKMNPNNRDS--HHFLMSLYAGISKGPEVYRVWESLKKARPEV 346
Query: 313 LNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
N Y+ ML ++ K+G+L+ +K+ EWE C+ YD R+ NI + Y + M E+A+ +L
Sbjct: 347 NNLSYLVMLQAMSKLGDLDGIKKIFTEWESKCWAYDMRLANIAINTYLKGNMYEEAEKIL 406
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENK-FWRPKPSLVSSIL 431
+KK K P + ++ + + + A + ++ A++ ENK W LVS
Sbjct: 407 DGAMKKSKGPFSKARQLLMIHLLENDKADLAMKHLEAAVSDSAENKDEWGWSSELVSLFF 466
Query: 432 DWLGDNRDVEEVEAFVSSL 450
+DV+ E F L
Sbjct: 467 LHFEKAKDVDGAEDFCKIL 485
>gi|255581582|ref|XP_002531596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528792|gb|EEF30799.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 300
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 105/252 (41%), Positives = 167/252 (66%), Gaps = 1/252 (0%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
N LY RISP+GDP VS+ P+LDQW+ EG+ +++ +LQ I++LR KR+ HAL++S WMS
Sbjct: 49 NQLYRRISPVGDPKVSIVPILDQWIEEGKSVNKDQLQVFIKELRYCKRYTHALEISMWMS 108
Query: 97 GQG-LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDE 155
+ A + D A++LDL+ KV G+E AE YF ++ + KV ++Y ALLNCY VD+
Sbjct: 109 DKRYFALTSRDVAIRLDLMSKVLGIEQAEKYFENVPQKLKVLEVYNALLNCYAYAKSVDK 168
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
+ ++MQ M+++G G L YN ++ L+ TG +K+ ++L+M+ENG+ D F+ I ++
Sbjct: 169 AEAVMQNMRDLGFAGKTLTYNVMLNLHYQTGNFKKLEALMLEMEENGIAYDRFTLGIQLS 228
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK 275
+Y A ++ ME ++ MES +++ DW Y+ VAN Y AGL +KA+ LKK E +++
Sbjct: 229 AYAAICDIQRMEKIMSRMESDANVVTDWCNYAIVANGYRKAGLMDKALEMLKKSEGLITG 288
Query: 276 SKDALGYNHLIS 287
K + YN L++
Sbjct: 289 KKRSSAYNFLLT 300
>gi|357110627|ref|XP_003557118.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Brachypodium distachyon]
Length = 536
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 144/516 (27%), Positives = 247/516 (47%), Gaps = 58/516 (11%)
Query: 27 AYRAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFK 86
A R+ K LY R+ G ++ +D ++ ++ + E+ +R+LR ++ ++
Sbjct: 9 ARRSSKKYVEEALYRRLFRRGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRRLRRQELYR 68
Query: 87 HALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNC 146
AL+++E M+ +G+ +V D A++LDL+ K RG+ +AE YF L + K YGALLNC
Sbjct: 69 PALKLTEVMARRGMNPTVGDQAIRLDLVAKSRGIAAAEKYFMDLPETSKTHLTYGALLNC 128
Query: 147 YVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPD 206
Y +E + +++ +LM+KMKE+ +A++YN +M LYT Q EK+P ++ DMK + V PD
Sbjct: 129 YCKESMTEKAEALMEKMKELNFAFTAMSYNSLMTLYTKVNQPEKVPSIIQDMKADDVLPD 188
Query: 207 NFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYL 266
++Y + + S AR ++S +E V++EM+ + DW TYS +A+ Y+ AGL EKA L
Sbjct: 189 VYTYNVWMRSLAARQDISGVERVIEEMKRDGRVVPDWTTYSNLASIYVEAGLFEKAEAAL 248
Query: 267 KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVK 326
K+ E + S D Y LI+ Y N E+ W K ++ N Y+ M+ L
Sbjct: 249 KELEK-RNTSNDLEAYQFLITLYGRTQNLVEVHHVWRSLKRNNPRKANMSYLNMIQVLAN 307
Query: 327 IGELEEAEKMLEEWELSCYCYDFRVPNIILL------------------------GYSQK 362
+ +L AE +EWE + Y + I + G K
Sbjct: 308 LKDLPAAEACFKEWE-ARYIRPPKTKAIDAVTTETSKLDQESSTTNASNNDSDAKGTEDK 366
Query: 363 GM---------------------------IEKADAVLKEIVKKGKTPTPNSWSIIAAGYA 395
GM ++KA A+ K +G +W I Y
Sbjct: 367 GMEEIDMKHPKYDIRVANALMKAYVTEGMLDKAVALKKRAKMRGGRLNSKTWEIFMEHYI 426
Query: 396 DKNNMEKAFECMKEALAV-HEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKV 454
+++ A C A+ H + W P + +++ + +DV+ E FV LK KV
Sbjct: 427 KVGDLKNAHWCTDRAIKKGHSSGRIWVPPRDVTETLMGYFEKKKDVDGAEKFVEVLK-KV 485
Query: 455 QK---RNMYHALTEAHIRSGQEVDGLLESMKADDID 487
QK ++ L + +G++ G+ +K ++++
Sbjct: 486 QKDLGTVVFEPLVRTYAAAGKKFPGMRHRLKIENVE 521
>gi|357137419|ref|XP_003570298.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Brachypodium distachyon]
Length = 513
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 132/450 (29%), Positives = 239/450 (53%), Gaps = 9/450 (2%)
Query: 44 SPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWM-SGQGLAF 102
SP G ++ +++W E +S +L+R + QLR +R+ HAL++ WM S + L
Sbjct: 52 SPRGS---AVAAAIERWAQERGHVSRPDLRRAVSQLRRARRYDHALEILSWMDSRKDLNL 108
Query: 103 SVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQK 162
S DHA +LDLI KV G AE Y+ L + + LL+CYV E V ++ S M
Sbjct: 109 SPLDHAARLDLIAKVHGTCHAEEYYKKLRNAACREAASFPLLHCYVAERNVQKAESFMAS 168
Query: 163 MKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSE 222
++ +G ++N ++ LY T Q EK V+ MK + +P + SY + +N+
Sbjct: 169 LQSIGLPVDPHSFNEMLKLYVATCQFEKALAVIDLMKRSNIPRNVLSYNLWMNACSVLG- 227
Query: 223 LSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGY 282
++S+++V +EM + + + W T+ T+AN +I GL KA+ L+ E +S + LGY
Sbjct: 228 VASVQSVFKEMVNDGTVEVGWSTFCTLANIFIKHGLNSKALACLRTAETKLS-PRQRLGY 286
Query: 283 NHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWEL 342
+ +++ YA L + D +M+ W K + + +Y++ + +K+G++ +AE + WE
Sbjct: 287 SFVMTCYARLDDSDGVMRLWEASKSVPGRIPSANYMSTIICSIKVGDIAQAEWIFGSWEA 346
Query: 343 SC-YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNME 401
C D RV N++L Y + G IEKA+ + +++KG P +W I+ G+ M+
Sbjct: 347 ECGRKNDVRVSNVLLGAYVRNGWIEKAERLHLHMLEKGAHPNYKTWEILLEGFVQSRQMD 406
Query: 402 KAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL-KIKVQKRNMY 460
KA +K+AL++ ++ WRP LV +I + ++ +V++ ++ L K + +Y
Sbjct: 407 KAVNAIKKALSL-SKSCHWRPPLELVEAIATFFEEHGNVDDANRYIKVLQKFNLTSLPLY 465
Query: 461 HALTEAHIRSGQEVDGLLESMKADDIDEDK 490
++ A+I++ + E + D I D+
Sbjct: 466 KSVLRAYIKADAVPPNISEMIARDQIIMDE 495
>gi|125579556|gb|EAZ20702.1| hypothetical protein OsJ_36321 [Oryza sativa Japonica Group]
Length = 491
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 128/411 (31%), Positives = 217/411 (52%), Gaps = 13/411 (3%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
+ L R+ L P S VL +W EG+ + + +L RV+ QLR +RFKHAL+
Sbjct: 28 DTLGRRLLKLIYPKRSAAVVLRRWAEEGRTVQKYQLNRVVCQLRKYRRFKHALE------ 81
Query: 97 GQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDES 156
+ L+F + GL SAE +F + + K ALL+ YV+ G D++
Sbjct: 82 -RKLSFFRGPRRCTSTSCQRSGGLPSAEKFFEDMPERAKGPSTCNALLHAYVQHGRRDKA 140
Query: 157 LSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINS 216
+++++M + G AL +N +M LY ++G+ EK+P+++ +++ +P D +Y I +
Sbjct: 141 EAMLEEMAKAGYLTCALPFNHMMSLYMSSGELEKVPEMIKELRRYTIP-DLVTYNIWLTY 199
Query: 217 YGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS 276
++ + + E V M+ + + DW T+S + + YI AGL K L + E S+
Sbjct: 200 CSKKNSVKAAEKVYDLMKDE-RVVPDWMTFSLLGSIYINAGLHVKGRDALVEMEKRASR- 257
Query: 277 KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKM 336
K+ Y+ L++ YASL ++ + + W + +K + +Y ML SL + G++ EAE
Sbjct: 258 KERAAYSSLLTLYASLSDRGNLDRVWRKMRETFRKFSDTEYKCMLTSLTRFGDIAEAESF 317
Query: 337 LEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYAD 396
EWE + D R+PN IL Y + GM+EKA+ L IV+KG P+ ++W + GY
Sbjct: 318 YSEWESASGTRDSRIPNTILAFYIKNGMMEKAEGFLDHIVQKGVKPSYSTWELFVWGYLS 377
Query: 397 KNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFV 447
M+K EC+K+AL+ E+ W P P L ++I + + D+E E +
Sbjct: 378 DGRMDKVLECLKKALSCLEK---WDPNPQLATAIYSQIEEKGDIEAAEKLL 425
>gi|226502666|ref|NP_001140872.1| uncharacterized protein LOC100272948 [Zea mays]
gi|194701536|gb|ACF84852.1| unknown [Zea mays]
gi|413924212|gb|AFW64144.1| hypothetical protein ZEAMMB73_253479 [Zea mays]
Length = 525
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 131/444 (29%), Positives = 226/444 (50%), Gaps = 4/444 (0%)
Query: 49 PDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWM-SGQGLAFSVHDH 107
P + +++W + +S+ EL+R I LR +R++ AL++ WM S L S DH
Sbjct: 66 PAGTAAAAVERWAQDRVHVSQPELRRAIGMLRRERRYEQALEIFSWMESCSSLRLSSWDH 125
Query: 108 AVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMG 167
A +LDLI K AE Y+N L LL+CYV E V ++ + M +++ G
Sbjct: 126 AARLDLIAKAYSTSQAEEYYNKLQSPATRQAASFPLLHCYVMERDVQKAETFMAQLQSHG 185
Query: 168 SFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSME 227
++N IM LY T Q+EK+ V+ MK N + + SY + +N+ S + S++
Sbjct: 186 LPVDPHSFNEIMKLYVATCQYEKVLSVIDLMKRNNIHRNVLSYNLWMNACAEVSGVDSVQ 245
Query: 228 NVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLIS 287
+V Q M + + + W TY T+AN + GL +A L K E +S + LGY+ +++
Sbjct: 246 SVFQVMLNDETVKVGWSTYCTLANIFRKNGLNNEAQACLVKAEAKLSPA-GRLGYSFVMT 304
Query: 288 HYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCY 347
YA+L + D +M+ W K + Y+ + +K+G++ +AE + +WE C +
Sbjct: 305 CYAALNDSDGVMRMWEASKSVPGRIPTAYYMAAMSCSIKVGDISQAECIFGKWEAGCRKH 364
Query: 348 DFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECM 407
D RV N++L Y + IEKA+ + +++KG P +W I+ GY M+KA CM
Sbjct: 365 DVRVSNVLLGAYVRNRWIEKAERLHLHMLEKGACPNYKTWEILMEGYVQSRQMDKAVGCM 424
Query: 408 KEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL-KIKVQKRNMYHALTEA 466
K+ L++ ++ WRP L+ +I + ++ ++ L + + +Y +L A
Sbjct: 425 KKGLSLL-KSCHWRPPVELMEAIGKHFEEQGSADDAYRYIKVLQRFNLTSLPLYKSLIRA 483
Query: 467 HIRSGQEVDGLLESMKADDIDEDK 490
+I + +LE + D ID D+
Sbjct: 484 YINADVVPPNVLEMIAKDQIDMDE 507
>gi|125536853|gb|EAY83341.1| hypothetical protein OsI_38557 [Oryza sativa Indica Group]
Length = 444
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 120/361 (33%), Positives = 199/361 (55%), Gaps = 7/361 (1%)
Query: 88 ALQVSEWMSGQG-LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNC 146
LQ+ EWM Q + DHAV LDL+ KVRGL SAE +F + + K ALL+
Sbjct: 24 CLQICEWMRTQPEMRLLPGDHAVHLDLVAKVRGLPSAEKFFEDMPERAKGPSTCNALLHA 83
Query: 147 YVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPD 206
YV+ G D++ +++++M + G AL +N +M LY ++G+ EK+P+++ +++ +P D
Sbjct: 84 YVQHGRRDKAEAMLEEMAKAGYLTCALPFNHMMSLYMSSGELEKVPEMIKELRRYTIP-D 142
Query: 207 NFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYL 266
+Y I + ++ + + E V M+ + + DW T+S + + YI AGL K L
Sbjct: 143 LVTYNIWLTYCSKKNSVKAAEKVYDLMKDE-RVVPDWMTFSLLGSIYINAGLHVKGRDAL 201
Query: 267 KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVK 326
+ E S+ K+ Y+ L++ YASL ++ + + W + +K + +Y ML SL +
Sbjct: 202 VEMEKRASR-KERAAYSSLLTLYASLSDRGNLDRVWRKMRETFRKFSDTEYKCMLTSLTR 260
Query: 327 IGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNS 386
G++ EAE EWE + D R+PN IL Y + GM+EKA+ L IV+KG P+ ++
Sbjct: 261 FGDIAEAESFYSEWESASGTRDSRIPNTILAFYIKNGMMEKAEGFLDHIVQKGVKPSYST 320
Query: 387 WSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAF 446
W + GY M+K EC+K+AL+ E+ W P P L ++I + + D+E E
Sbjct: 321 WELFVWGYLSDGRMDKVLECLKKALSCLEK---WDPNPQLATAIYSQIEEKGDIEAAEKL 377
Query: 447 V 447
+
Sbjct: 378 L 378
>gi|115449217|ref|NP_001048388.1| Os02g0796400 [Oryza sativa Japonica Group]
gi|47497029|dbj|BAD19082.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47497238|dbj|BAD19283.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537919|dbj|BAF10302.1| Os02g0796400 [Oryza sativa Japonica Group]
gi|125584008|gb|EAZ24939.1| hypothetical protein OsJ_08720 [Oryza sativa Japonica Group]
Length = 517
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/436 (30%), Positives = 230/436 (52%), Gaps = 4/436 (0%)
Query: 57 LDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWM-SGQGLAFSVHDHAVQLDLIG 115
+++W E ++S EL+R + +LR +R++ AL++ WM S S DH V+LDLI
Sbjct: 69 VERWARERGRVSPPELRRDVVRLRRARRYEQALEILSWMDSHNDFRLSPSDHMVRLDLIA 128
Query: 116 KVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNY 175
KV G AE Y+ L+ LL+CYV E V ++ + M +++ G ++
Sbjct: 129 KVHGTSQAEEYYRKLSTAASKKAASFPLLHCYVTERNVQKAETFMAELQRYGLPVDPHSF 188
Query: 176 NGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMES 235
N IM LY T Q+EK+ V+ MK N +P + SY I +N+ S L+S+++ +EM +
Sbjct: 189 NEIMKLYVATCQYEKVLSVIYLMKRNNIPRNVLSYNIWMNACAEVSGLASVQSAFKEMLN 248
Query: 236 QSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNK 295
+ + W TY T+AN + G KA+ L+ E +S S LGY+ +++ YA+L ++
Sbjct: 249 DDMVEVGWSTYCTLANIFKKYGQSSKALACLRTAETKLS-STGRLGYSFIMTCYAALNDR 307
Query: 296 DEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNII 355
D +++ W KI + +Y++ + L+K+G++ AE WE +D RV N++
Sbjct: 308 DGVIRLWEASKIVPGRIPAANYMSAMVCLIKVGDIGRAEWTFGSWEAESKKHDVRVSNVL 367
Query: 356 LLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHE 415
L Y + G IEKA+ + +++KG P +W I+ G+ M+KA MK+ L++
Sbjct: 368 LGAYVRNGWIEKAERLHLHMLEKGAHPNYKTWEILMEGFVQSKQMDKAVNAMKKGLSLL- 426
Query: 416 ENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL-KIKVQKRNMYHALTEAHIRSGQEV 474
+ WRP L+ +I + + VE+ + F+ L K + +Y +L A+I +
Sbjct: 427 KTCHWRPPLELLEAIAKYFEEQGSVEDADRFIKVLQKFNLTSLPLYKSLLGAYINADIVP 486
Query: 475 DGLLESMKADDIDEDK 490
+ + + D ID D+
Sbjct: 487 QNIPQMIAGDQIDMDE 502
>gi|125541465|gb|EAY87860.1| hypothetical protein OsI_09282 [Oryza sativa Indica Group]
Length = 517
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 132/436 (30%), Positives = 230/436 (52%), Gaps = 4/436 (0%)
Query: 57 LDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWM-SGQGLAFSVHDHAVQLDLIG 115
+++W E ++S EL+R + +LR +R++ AL++ WM S S DH V+L+LI
Sbjct: 69 VERWARERGRVSPPELRRDVVRLRRARRYEQALEILSWMDSHNDFRLSPSDHMVRLELIA 128
Query: 116 KVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNY 175
KV G AE Y+ L+ LL+CYV E V ++ + M +++ G ++
Sbjct: 129 KVHGTSQAEEYYRKLSTAASKKAASFPLLHCYVTERNVQKAETFMAELQRYGLPVDPHSF 188
Query: 176 NGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMES 235
N IM LY T Q+EK+ V+ MK N +P + SY I +N+ S L+S+++ +EM +
Sbjct: 189 NEIMKLYVATCQYEKVLSVIYLMKRNNIPRNVLSYNIWMNACAEVSGLASVQSAFKEMLN 248
Query: 236 QSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNK 295
+ + W TY T+AN + G KA+ L+ E +S S LGY+ +++ YA+L ++
Sbjct: 249 DDMVEVGWSTYCTLANIFKKYGQSSKALACLRTAETKLS-STGRLGYSFIMTCYAALNDR 307
Query: 296 DEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNII 355
D +++ W KI + +Y++ + L+K+G++ AE WE +D RV N++
Sbjct: 308 DGVIRLWEASKIVPGRIPAANYMSAMVCLIKVGDIGRAEWTFGSWEAESKKHDVRVSNVL 367
Query: 356 LLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHE 415
L Y + G IEKA+ + +++KG P +W I+ G+ M+KA MK+ L++
Sbjct: 368 LGAYVRNGWIEKAERLHLHMLEKGAHPNYKTWEILMEGFVQSKQMDKAVNAMKKGLSLL- 426
Query: 416 ENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL-KIKVQKRNMYHALTEAHIRSGQEV 474
+ WRP L+ +I + + VE+ + F+ L K + +Y +L A+I +
Sbjct: 427 KTCHWRPPLELLEAIAKYFEEQGSVEDADRFIKVLQKFNLTSLPLYKSLLGAYINADIVP 486
Query: 475 DGLLESMKADDIDEDK 490
+ + + D ID D+
Sbjct: 487 QNIPQMIAGDQIDMDE 502
>gi|413953409|gb|AFW86058.1| hypothetical protein ZEAMMB73_674343 [Zea mays]
Length = 626
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 128/452 (28%), Positives = 222/452 (49%), Gaps = 55/452 (12%)
Query: 89 LQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYV 148
L +SE M+ +G+ +V D A++LDLI K RG+ +AE YF L + K YGALLN Y
Sbjct: 161 LVLSEVMARRGMNPTVSDQAIRLDLIAKSRGIAAAEKYFLDLPETSKTHLTYGALLNSYC 220
Query: 149 REGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNF 208
+E + +++ SLM+KMKE+ +A+++N +M +YT Q EK+P ++ DMK + V PD F
Sbjct: 221 KELMTEKAESLMEKMKELNFAFTAMSFNSLMTMYTKVNQAEKVPSIIQDMKADDVLPDVF 280
Query: 209 SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKK 268
+Y + + + A ++ +E V++EM+ ++ DW TYS +A+ Y+ AG+ EKA LK+
Sbjct: 281 TYNVWMRALAALKDIPGVERVIEEMKRDGRVAPDWTTYSNLASIYVEAGMFEKAEAALKE 340
Query: 269 CEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIG 328
E + S D Y LI+ Y N E+ + W K + N Y+ M+ L +
Sbjct: 341 LEK-RNTSNDIEAYQFLITLYGRTQNLVEVHRVWRSLKRDNPRMANMSYLNMIQVLANLK 399
Query: 329 EL-------------------------------------------------EEAEKMLEE 339
+L E ++ E+
Sbjct: 400 DLSAAEACFKEWEARHIHPPKTNTKGSGADNTPGADPKSPSNPPNNQSGTKETGDETAED 459
Query: 340 WELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNN 399
+ YD RV N ++ Y +GM++KA A+ K +G +W I Y +
Sbjct: 460 LQPKHPKYDIRVANAMIKAYITEGMLDKAVAMKKRAKMRGGRLNAKTWEIFMEHYLKTGD 519
Query: 400 MEKAFECMKEALAV-HEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQK-- 456
++ A C A+ H + W P P++ +++ + +N+DV+ E +V +LK KVQK
Sbjct: 520 LKMAHWCADRAMKKGHSSGRIWVPPPAVTETLMSYFEENKDVDGAERYVGALK-KVQKDL 578
Query: 457 -RNMYHALTEAHIRSGQEVDGLLESMKADDID 487
++ L + +G++ G+ + +K ++++
Sbjct: 579 GAPVFEPLVRTYAAAGKKFPGMRQRLKIENVE 610
>gi|125591164|gb|EAZ31514.1| hypothetical protein OsJ_15655 [Oryza sativa Japonica Group]
Length = 531
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 201/373 (53%), Gaps = 4/373 (1%)
Query: 88 ALQVSEWMSGQGLAFSVH--DHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLN 145
A V +WM+ + FS+ D A+QLDLI KVRG+ AE YF L D K + YG+LLN
Sbjct: 146 AKDVYDWMTERRDRFSLSSSDMAIQLDLIAKVRGVSHAEEYFEELPDPLKDKRTYGSLLN 205
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
Y + + +++ S ++M++ G L +N +M Y + + EK+ ++ +M E V
Sbjct: 206 VYAQAMMKEKTESTFEQMRKKGFATDTLPFNVLMNFYVDAEEAEKVSILIDEMMERNVAF 265
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
D +Y I I S A + +ME V +M + +W TY+T+A+ +I G EKA
Sbjct: 266 DVCTYNIWIKSCAAMQDADAMEQVFNQMIRDETVVANWTTYTTLASMHIKLGNSEKAEES 325
Query: 266 LKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLV 325
LK+ E + ++ +++L++ Y+ LG K+E+ + W K N Y +L +LV
Sbjct: 326 LKEAEKRTT-GREKKCFHYLMTLYSHLGKKEEVYRVWNWYKATFPTIHNLGYQEVLSALV 384
Query: 326 KIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPN 385
++G++E AE + EEW +D + NI+L Y+++G + KA+ L V+KG P PN
Sbjct: 385 RLGDIEGAELLYEEWASKSSSFDPKTMNILLAWYAREGFVTKAEQTLNRFVEKGGNPKPN 444
Query: 386 SWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEA 445
+W I+ Y +A C+++A AV +K WRP+P+ V S+L + D E +
Sbjct: 445 TWEILGTAYLKDGQSSEALSCLEKATAVASPSK-WRPRPTNVESLLANFKEKNDAESADR 503
Query: 446 FVSSLKIKVQKRN 458
++ L+ + + N
Sbjct: 504 LMNVLRSRRCEEN 516
>gi|125575304|gb|EAZ16588.1| hypothetical protein OsJ_32060 [Oryza sativa Japonica Group]
Length = 475
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 126/425 (29%), Positives = 231/425 (54%), Gaps = 16/425 (3%)
Query: 77 RQLRSRKRF-------KHALQVSEWMS-GQGLAFSVHDHAVQLDLIGKVRGLESAETYFN 128
R R +K F + +S WM+ + L S D A +L+LI KV GL+ A YF+
Sbjct: 45 RAFRGKKPFFGGFPGPNPGIPLSMWMTERRHLHLSPGDVAYRLELISKVHGLDKAVEYFD 104
Query: 129 SLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQH 188
++ ++ + + YG+LL CY V+++ L + M+ MG ++ YN +M LY+ GQ
Sbjct: 105 AVPNQLRELQCYGSLLRCYAEAERVEKAEELFENMRGMG-MANSYAYNAMMNLYSQIGQV 163
Query: 189 EKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYST 248
E++ + M+E G+ PD F+ +++Y ++ ++E VL++ + +S W +++
Sbjct: 164 ERVDSMYKAMEEGGIVPDIFTIDNLVSAYADVEDVEAIEKVLEKASCNNLMS--WHSFAI 221
Query: 249 VANYYIIAGLKEKAIIYLKKCEDIVSKSKDA-LGYNHLISHYASLGNKDEMMKFWGLQKI 307
V ++ AG++E+A+ ++ E ++ KD + Y L++ YA L E+ + W + +
Sbjct: 222 VGKVFMKAGMQERALQAFQESEKRITARKDGRVAYGFLLTMYADLQMDSEVDRIWDVYRS 281
Query: 308 KCKKQ-LNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIE 366
K N Y+ + L+K+ ++ AEK EEWE +D R+ NI+L Y ++G++E
Sbjct: 282 KVPASACNTMYMCRISVLLKMNDIVGAEKAYEEWESKHVYHDSRLINILLTAYCKEGLME 341
Query: 367 KADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSL 426
KA+A++ + +KKG+T N+W +A GY + KA + K+ALA W+P +
Sbjct: 342 KAEALVDQFIKKGRTLFSNTWYKLAGGYFKVGQVSKAADLTKKALASASNE--WKPDLAN 399
Query: 427 VSSILDWLGDNRDVEEVEAFVSSLKIKVQ-KRNMYHALTEAHIRSGQEVDGLLESMKADD 485
V +++ + ++VE E S L+ V R++YH L + ++ +G+ LL+ MK D
Sbjct: 400 VLMSINYFAEQKNVEAAEEMASLLQRLVPLTRDVYHGLLKTYVNAGEPASDLLDRMKKDG 459
Query: 486 IDEDK 490
I+ D+
Sbjct: 460 IEADE 464
>gi|449470082|ref|XP_004152747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Cucumis sativus]
Length = 439
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 119/342 (34%), Positives = 194/342 (56%), Gaps = 3/342 (0%)
Query: 65 QKISELELQRVIRQLRSRKRFKHALQVSEWMSGQ-GLAFSVHDHAVQLDLIGKVRGLESA 123
Q+ S +L+RV+++ KRF+ AL+ M + +HA++L+L K GL A
Sbjct: 88 QRTSITKLRRVVKKFCKSKRFERALEALILMETRDNFRMYPAEHALRLELTIKAHGLLKA 147
Query: 124 ETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYT 183
E YFN L LL+ YV+E +++ + M K+++ G + YN +M LY
Sbjct: 148 EEYFNQLPTIASQKASSLPLLHGYVKERNTEKAEAFMVKLRDSGLVVNHHLYNEMMKLYV 207
Query: 184 NTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDW 243
T Q+EK+P V+ DMK+N +P + SY + +N+ + S+E V +EM + ++ + W
Sbjct: 208 ATYQNEKVPLVIKDMKQNQIPRNVLSYNLWMNACSELYGVGSIELVFEEMLTDKNVQVGW 267
Query: 244 GTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWG 303
T T+AN YI GL EKA LK+ E +S K LGY LI+ YASL +K+ + + W
Sbjct: 268 STMCTLANVYIQEGLVEKAFAALKEAEKKLSPCKR-LGYFFLITLYASLKDKEGVFRVWR 326
Query: 304 LQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKG 363
K +YI +L LVK+GE+++AEK+ +EWEL+C YD RV N++L Y + G
Sbjct: 327 ASKAVSGNPTCANYICILLCLVKLGEIDKAEKVFKEWELNCRNYDIRVSNVLLGAYVRNG 386
Query: 364 MIEKADAVLKEIVKKGKTPTPNSWSIIAAGYA-DKNNMEKAF 404
++EKA+++ + + +G P +W I+ G+ + N+++A
Sbjct: 387 LLEKAESLHRHTLGRGGNPNYKTWEILMEGWVRSQQNVDRAI 428
>gi|449515498|ref|XP_004164786.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Cucumis sativus]
Length = 439
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 118/342 (34%), Positives = 194/342 (56%), Gaps = 3/342 (0%)
Query: 65 QKISELELQRVIRQLRSRKRFKHALQVSEWMSGQ-GLAFSVHDHAVQLDLIGKVRGLESA 123
Q+ S +L+RV+++ KR++ AL+ M + +HA++L+L K GL A
Sbjct: 88 QRTSITKLRRVVKKFCKSKRYERALEALILMETRDNFRMYPAEHALRLELTIKAHGLLKA 147
Query: 124 ETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYT 183
E YFN L LL+ YV+E +++ + M K+++ G + YN +M LY
Sbjct: 148 EEYFNQLPTIASQKASSLPLLHGYVKERNTEKAEAFMVKLRDSGLVVNHHLYNEMMKLYV 207
Query: 184 NTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDW 243
T Q+EK+P V+ DMK+N +P + SY + +N+ + S+E V +EM + ++ + W
Sbjct: 208 ATYQNEKVPLVIKDMKQNLIPRNVLSYNLWMNACSELYGVGSIELVFEEMLTDKNVQVGW 267
Query: 244 GTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWG 303
T T+AN YI GL EKA LK+ E +S K LGY LI+ YASL +K+ + + W
Sbjct: 268 STMCTLANVYIQEGLVEKAFAALKEAEKKLSPCKR-LGYFFLITLYASLKDKEGVFRVWR 326
Query: 304 LQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKG 363
K +YI +L LVK+GE+++AEK+ +EWEL+C YD RV N++L Y + G
Sbjct: 327 ASKAVSGNPTCANYICILLCLVKLGEIDKAEKVFKEWELNCRNYDIRVSNVLLGAYVRNG 386
Query: 364 MIEKADAVLKEIVKKGKTPTPNSWSIIAAGYA-DKNNMEKAF 404
++EKA+++ + + +G P +W I+ G+ + N+++A
Sbjct: 387 LLEKAESLHRHTLGRGGNPNYKTWEILMEGWVRSQQNVDRAI 428
>gi|449457725|ref|XP_004146598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 227
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/202 (46%), Positives = 142/202 (70%), Gaps = 1/202 (0%)
Query: 34 VARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSE 93
V ++NLY RISP+GDP++S+TP+LDQWVLEG+ + + EL+ +I++LR KRFKHAL++S+
Sbjct: 26 VVKDNLYRRISPVGDPNISVTPLLDQWVLEGRLVQQDELRHIIKELRVYKRFKHALEISK 85
Query: 94 WMSGQG-LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGL 152
WMS + S D A++++LI +V GLE E YF+++ + K +++ ALLNCY E
Sbjct: 86 WMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYFDNMPSQLKRYQVHIALLNCYAHEKC 145
Query: 153 VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
VD++ + MQK+KEMG S L YN +M LY G+ E++ +L +MKE GV D F+Y I
Sbjct: 146 VDKANAFMQKIKEMGFANSPLPYNIMMNLYHQIGEFERLDSLLKEMKERGVYYDRFTYSI 205
Query: 213 CINSYGARSELSSMENVLQEME 234
I++Y A S+ +E ++++ME
Sbjct: 206 RISAYAAASDFRGIEKIMEQME 227
>gi|193806501|sp|Q9C7F1.2|PPR61_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g28020
Length = 566
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 135/475 (28%), Positives = 236/475 (49%), Gaps = 37/475 (7%)
Query: 42 RISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLA 101
RI+ + + PVL+QW +G +++ ++ +I++LR + ALQVSEWMS + +
Sbjct: 41 RITDALHRNAQIIPVLEQWRQQGNQVNPSHVRVIIKKLRDSDQSLQALQVSEWMSKEKIC 100
Query: 102 FSV-HDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESL--- 157
+ D A +L LI V GLE AE +F S+ + D +Y +LLN Y R D++L
Sbjct: 101 NLIPEDFAARLHLIENVVGLEEAEKFFESIPKNARGDSVYTSLLNSYARS---DKTLCKA 157
Query: 158 -SLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINS 216
+ QKM+++G + YN +M LY+ EK+ ++LL+MK+N V DN + +
Sbjct: 158 EATFQKMRDLGLLLRPVPYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLKL 217
Query: 217 YGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS 276
Y A +++ ME L + E I ++W T +A Y+ A KA+ L+ E +V +
Sbjct: 218 YSAVCDVTEMEKFLNKWEGIHGIKLEWHTTLDMAKAYLRARSSGKAMKMLRLTEQLVDQK 277
Query: 277 KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKM 336
Y+HL+ Y GN++E+++ W L K K ++ N Y T++ SL+K+ ++ AE++
Sbjct: 278 SLKSAYDHLMKLYGEAGNREEVLRVWKLYKSKIGERDNNGYRTVIRSLLKVDDIVGAEEI 337
Query: 337 LEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGK------TPTPNSWS-- 388
+ WE +D R+P ++ GY +GM EKA+ ++ K + TP W
Sbjct: 338 YKVWESLPLEFDHRIPTMLASGYRDRGMTEKAEKLMNSKTIKDRRMNKPVTPLLEQWGDQ 397
Query: 389 -------IIAAGYADKNNMEKAF---ECMKEALAVHEENKFWRPKPSLVSSILDWLGDNR 438
+ D KA E M E + + + + L ++L
Sbjct: 398 MKPSDLKCLIKNLRDSKQFSKALQVSEWMGEKQVCNLYLEDYAARLYLTENVL------- 450
Query: 439 DVEEVEAFVSSLKIKVQKRNMYHALTEAHIRS----GQEVDGLLESMKADDIDED 489
+EE E + ++ ++ ++Y AL ++ +S G VD +L M+ +++D D
Sbjct: 451 GLEEAEKYFENIPENMKDYSVYVALLSSYAKSDKNLGNMVDEILREMEENNVDPD 505
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 37/211 (17%)
Query: 53 LTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS-GQGLAFSVHDHAVQL 111
+TP+L+QW G ++ +L+ +I+ LR K+F ALQVSEWM Q + D+A +L
Sbjct: 387 VTPLLEQW---GDQMKPSDLKCLIKNLRDSKQFSKALQVSEWMGEKQVCNLYLEDYAARL 443
Query: 112 DLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGS 171
L V GLE AE YF ++ + K +Y ALL+ Y + D++L M
Sbjct: 444 YLTENVLGLEEAEKYFENIPENMKDYSVYVALLSSYAKS---DKNLGNM----------- 489
Query: 172 ALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQ 231
+ ++L +M+EN V PD + + Y A S++ +ME ++
Sbjct: 490 -------------------VDEILREMEENNVDPDLITVNHVLKVYAAESKIQAMEMFMR 530
Query: 232 EMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
++ I ++ GT +A Y+ AGL +K+
Sbjct: 531 RWGTEDGIKLERGTMIAMAKAYVKAGLTKKS 561
>gi|15217811|ref|NP_174123.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|12322989|gb|AAG51479.1|AC069471_10 hypothetical protein [Arabidopsis thaliana]
gi|332192782|gb|AEE30903.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 133/472 (28%), Positives = 236/472 (50%), Gaps = 31/472 (6%)
Query: 42 RISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLA 101
RI+ + + PVL+QW +G +++ ++ +I++LR + ALQVSEWMS + +
Sbjct: 41 RITDALHRNAQIIPVLEQWRQQGNQVNPSHVRVIIKKLRDSDQSLQALQVSEWMSKEKIC 100
Query: 102 FSV-HDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVR-EGLVDESLSL 159
+ D A +L LI V GLE AE +F S+ + D +Y +LLN Y R + + ++ +
Sbjct: 101 NLIPEDFAARLHLIENVVGLEEAEKFFESIPKNARGDSVYTSLLNSYARSDKTLCKAEAT 160
Query: 160 MQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGA 219
QKM+++G + YN +M LY+ EK+ ++LL+MK+N V DN + + Y A
Sbjct: 161 FQKMRDLGLLLRPVPYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSA 220
Query: 220 RSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDA 279
+++ ME L + E I ++W T +A Y+ A KA+ L+ E +V +
Sbjct: 221 VCDVTEMEKFLNKWEGIHGIKLEWHTTLDMAKAYLRARSSGKAMKMLRLTEQLVDQKSLK 280
Query: 280 LGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEE 339
Y+HL+ Y GN++E+++ W L K K ++ N Y T++ SL+K+ ++ AE++ +
Sbjct: 281 SAYDHLMKLYGEAGNREEVLRVWKLYKSKIGERDNNGYRTVIRSLLKVDDIVGAEEIYKV 340
Query: 340 WELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGK------TPTPNSWS----- 388
WE +D R+P ++ GY +GM EKA+ ++ K + TP W
Sbjct: 341 WESLPLEFDHRIPTMLASGYRDRGMTEKAEKLMNSKTIKDRRMNKPVTPLLEQWGDQMKP 400
Query: 389 ----IIAAGYADKNNMEKAF---ECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVE 441
+ D KA E M E + + + + L ++L +E
Sbjct: 401 SDLKCLIKNLRDSKQFSKALQVSEWMGEKQVCNLYLEDYAARLYLTENVL-------GLE 453
Query: 442 EVEAFVSSLKIKVQKRNMYHALTEAHIRS----GQEVDGLLESMKADDIDED 489
E E + ++ ++ ++Y AL ++ +S G VD +L M+ +++D D
Sbjct: 454 EAEKYFENIPENMKDYSVYVALLSSYAKSDKNLGNMVDEILREMEENNVDPD 505
>gi|297851240|ref|XP_002893501.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339343|gb|EFH69760.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 667
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 135/490 (27%), Positives = 245/490 (50%), Gaps = 39/490 (7%)
Query: 27 AYRAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFK 86
AY+ V V+ L RI+ + + PVL+QW +G +++ ++ +I++LR +
Sbjct: 20 AYQNVITVS--TLNHRITDALHRNAQIIPVLEQWRQQGNQVNPSHVRVIIKKLRDSDQSL 77
Query: 87 HALQVSEWMSGQGLAFSV-HDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLN 145
ALQVSEWMS + + + D A +L LI V GLE AE +F S+ + D +Y LLN
Sbjct: 78 QALQVSEWMSKEKICNLIPEDFAARLHLIENVVGLEEAEKFFESIPKNARDDSVYTTLLN 137
Query: 146 CYVREGLVDESL----SLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
Y R D++L + QKM+E+G YN +M LY EK+ ++L +MK+N
Sbjct: 138 WYARS---DKTLCKAEATFQKMRELGLLSRPSPYNAMMSLYIALNDREKVEELLREMKDN 194
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
V D+ + + Y A ++++ME L + E + I ++W T +A Y+ A K
Sbjct: 195 DVEADSITVNNVLKLYSAVCDVTAMEKFLNKWEGINGIKLEWLTTLDMAKAYLRARSNGK 254
Query: 262 AIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITML 321
AI L+ E++ + Y+HL+ Y GN++E+++ W L K+ ++ N+ Y T++
Sbjct: 255 AIKMLRLTEELADRKSLKSAYDHLMKLYGEAGNREEVLRIWNLYKMNIGQRDNKGYRTVI 314
Query: 322 GSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGK- 380
SL+K+ ++ AE++ + WE +D R+P ++ GY ++GM EKA+ ++ K +
Sbjct: 315 RSLLKVDDIFGAEEIYKVWESLSLEFDIRIPTMLASGYRERGMTEKAEKLINSKTIKDRK 374
Query: 381 -----TPTPNSWS---------IIAAGYADKNNMEKAF---ECMKEALAVHEENKFWRPK 423
TP W + D N KA E M E ++ + +
Sbjct: 375 MNKPVTPLLEQWGDQMKPSDLKCLIKNLRDSNQFSKALQVSEWMGEKRVCDLYSEDYAAR 434
Query: 424 PSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNMYHALTEAHIRSGQEVDGLLE---- 479
L ++L +E+ E + ++ ++ ++Y AL ++ +S + ++ ++E
Sbjct: 435 LYLTENVL-------GLEKAEKYFENIPENMKDYSVYVALLSSYAKSDKNLENMVEEILR 487
Query: 480 SMKADDIDED 489
M+ +++D D
Sbjct: 488 EMEENNVDPD 497
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 129/282 (45%), Gaps = 50/282 (17%)
Query: 53 LTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLA-FSVHDHAVQL 111
+TP+L+QW G ++ +L+ +I+ LR +F ALQVSEWM + + D+A +L
Sbjct: 379 VTPLLEQW---GDQMKPSDLKCLIKNLRDSNQFSKALQVSEWMGEKRVCDLYSEDYAARL 435
Query: 112 DLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGS 171
L V GLE AE YF ++ + K +Y ALL+ Y + D++L M
Sbjct: 436 YLTENVLGLEKAEKYFENIPENMKDYSVYVALLSSYAKS---DKNLENM----------- 481
Query: 172 ALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQ 231
+ ++L +M+EN V PD+ + + Y A S++ +ME ++
Sbjct: 482 -------------------VEEILREMEENNVDPDSITVNYVLKVYAAASKVEAMEMFMR 522
Query: 232 EMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY-LKKCEDIVSK--SKDALGYNHLISH 288
+ + ++ G V N + K++ + K+C ++VS D GY +IS
Sbjct: 523 HWAVEMYGNVA-GCKREVHNLWEECKNKKEEKVGDGKECLNVVSTLLKMDDDGYRTVISS 581
Query: 289 YASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGEL 330
L + K +G K K K+ G+ +K+GE+
Sbjct: 582 LLKLDDVQGAEKVYGEWKPKGPKE---------GNALKVGEM 614
>gi|358344191|ref|XP_003636175.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
gi|355502110|gb|AES83313.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
Length = 790
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/340 (32%), Positives = 192/340 (56%), Gaps = 4/340 (1%)
Query: 86 KHALQVSEWMSGQGLAF--SVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGAL 143
+H LQV +WM+ + F S D A+QLDLI +V G+ SAE++F +L ++ K + YGAL
Sbjct: 292 EHVLQVYDWMNNRPERFRISASDVAIQLDLIARVHGVSSAESFFLNLTNDLKDKRTYGAL 351
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
LN YV +++ SL++ M+ +L +N +M L N ++K+ ++ +MKE +
Sbjct: 352 LNAYVHSRSREKAESLLEVMRSKRYLTHSLPFNLMMTLSMNLKDYDKVDMLVSEMKEKNI 411
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAI 263
D ++Y I ++S G++ + ME V ++M I +W T+ST+A YI L EKA
Sbjct: 412 QLDIYTYNIWLSSCGSQGSIEKMEQVFEQMLKDPTIIPNWSTFSTMAAMYIKMELFEKAQ 471
Query: 264 IYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGS 323
LKK E + +D + +++L+S Y S+GNKDE+ + W K N Y ++ S
Sbjct: 472 ECLKKAEGRI-LGRDKVPFHYLLSLYGSVGNKDEVYRVWNNYKSMFPSIPNLGYHAVISS 530
Query: 324 LVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPT 383
V++ ++E AEK+ EEW D R+ N+++ Y +KG +K + K + + G P
Sbjct: 531 FVRMDDIERAEKLYEEWVSVRPSDDSRIGNLLISWYLKKGKSDKVFSFFKHMSEGGGCPN 590
Query: 384 PNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPK 423
+W +++ G+ + + +A C+++A + ++K W+PK
Sbjct: 591 STTWELLSEGHIAEKRVSEALSCLEKAF-MTSDSKSWKPK 629
>gi|359484901|ref|XP_002268952.2| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial [Vitis vinifera]
Length = 396
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/352 (32%), Positives = 198/352 (56%), Gaps = 2/352 (0%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWM- 95
++L SRI L P S+T VL +W+ EG ++ EL+ + ++LR +R+KHAL++SEWM
Sbjct: 44 DDLKSRIFKLRLPKRSVTNVLQRWLGEGNQVHISELRNISKELRRAQRYKHALEISEWMV 103
Query: 96 SGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDE 155
S S D+AV++DL+ +V G+++AE YF L K + Y ALL+ Y L ++
Sbjct: 104 SHDEFELSDSDNAVRIDLMTRVFGIDAAERYFEGLPSAAKTSETYTALLHSYAGAKLAEK 163
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
+ L +++KE + L YN +M LY + GQ EK+ V+ ++K V PD F+Y + ++
Sbjct: 164 AEELYERIKESNVPLNILLYNEMMTLYMSVGQVEKVSLVVEELKRQKVVPDLFTYNLWVS 223
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK 275
S A ++ + +L+EM + S + W Y +AN YI+AG + +
Sbjct: 224 SCAATLDIDGVRRILKEMSNNSSANDGWVRYRNLANIYIMAGHLVNSASNSVVEAGTNTT 283
Query: 276 SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEK 335
+D + Y+ LI YA LGNKD++ + W K+ +K +R Y+ +L S V +G +++
Sbjct: 284 QRDWITYDFLIILYAGLGNKDKIDQIWKSLKMTKQKIKSRSYVCILSSYVMLGHIKDVGI 343
Query: 336 MLEEWELSCYC-YDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNS 386
+++EW+ S +D V +L +++ +IE+A+ K +++K PT S
Sbjct: 344 VIDEWKKSTTTDFDISVFYRLLDAFAELRLIEEAETFHKLLIRKSCLPTDES 395
>gi|224141193|ref|XP_002323959.1| predicted protein [Populus trichocarpa]
gi|222866961|gb|EEF04092.1| predicted protein [Populus trichocarpa]
Length = 355
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/338 (32%), Positives = 192/338 (56%), Gaps = 6/338 (1%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWM- 95
++L RI L P S+T V+D+WV EG +S EL+ + ++LR +RFKHAL++SEWM
Sbjct: 8 DDLKGRIFRLRLPKRSVTNVIDKWVREGNTVSSSELRHISKELRKSQRFKHALEISEWMV 67
Query: 96 SGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDE 155
+ + S DHA ++DL+ KV G+++AE YF+ L K + Y ALL+ Y L+++
Sbjct: 68 AHEEFELSDTDHASRIDLMTKVFGVDAAERYFDGLPLAAKTTETYTALLHSYAAAKLIEK 127
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
+ +++K +AL YN +M LY + GQ EK+ V+ ++K V PD F+Y + I+
Sbjct: 128 AEEFYKRIKGSNLPFTALMYNEMMTLYMSVGQLEKVSQVVEELKHQKVAPDIFTYNLWIS 187
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL---KEKAIIYLKKCEDI 272
S A + + +L EM S ++ DW Y + N Y+ AG E + + + E
Sbjct: 188 SCAAALNIDKVRRILDEMSQDSGVNDDWMRYIKIVNIYVTAGHLVNAESSTAAVVEAEKK 247
Query: 273 VSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEE 332
+++ ++ + Y+ L+ YA LG KD++ + W ++ +K +R+++ +L S + +G L+E
Sbjct: 248 ITQ-REWITYDFLVILYAGLGKKDKIDQIWKSLRMTNQKMTSRNFVCILSSYLMLGHLKE 306
Query: 333 AEKMLEEWELSCYC-YDFRVPNIILLGYSQKGMIEKAD 369
+++++W+ S +D N +L S G+ E A+
Sbjct: 307 VGEIVDQWKQSTTTDFDISACNRLLDAISCLGLTEIAN 344
>gi|449438238|ref|XP_004136896.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Cucumis sativus]
gi|449478839|ref|XP_004155431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Cucumis sativus]
Length = 406
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 201/353 (56%), Gaps = 10/353 (2%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
N+L SRI L P S VL++W EG +++ EL+ + ++LR +R+KHAL++ EWM
Sbjct: 56 NDLKSRIFQLRLPKRSAIRVLERWTSEGNQVTIAELRNISKELRKIQRYKHALEILEWMV 115
Query: 97 GQGLA-FSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDE 155
+ S D A+++DL+ KV G+++AE YF L + K + Y ALL+ + L D+
Sbjct: 116 SHNQSELSDSDFAIRIDLMTKVFGVDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTDK 175
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
+ +L +KMKE +AL +N +M LYT+ GQ EK+ ++ D+K+ V PD F+Y + I+
Sbjct: 176 AETLYEKMKESDIPLTALPFNEMMTLYTSIGQVEKVSSIVDDLKQRMVHPDIFTYNLWIS 235
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK 275
S A + ++ +L EM + + +W Y + N Y+ K +++ + + S
Sbjct: 236 SLAAALNIDGVKQILNEMNHNPNSNENWVRYIELVNIYV----KSANLLHSESNSVVESV 291
Query: 276 S----KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELE 331
S ++ + Y+ LI YA LGNKD++ + W ++ +K +R+YI ++ + + +L+
Sbjct: 292 SGISQREWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICIVSCYLMLDDLK 351
Query: 332 EAEKMLEEWELSCYC-YDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPT 383
E +++++W+ S +D N ++ + + G+ EKA++ + +++K PT
Sbjct: 352 EIGEVIDQWKQSTTTDFDISSCNRLVNAFIEAGLHEKANSFVNVLIQKNCEPT 404
>gi|168063926|ref|XP_001783918.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664548|gb|EDQ51263.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 448
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 126/443 (28%), Positives = 241/443 (54%), Gaps = 10/443 (2%)
Query: 49 PDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQ-GLAFSVHDH 107
P S+ P++ +W+ EG + + L ++ +LR R+R+K A+++S+WMS + + + + D+
Sbjct: 1 PQKSVVPLIKEWLNEGYALDKRVLVSILIRLRRRQRYKQAMEISDWMSEEKNIKWEMADN 60
Query: 108 AVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMG 167
V++DL K++ AE E K + Y LL Y + ++ +L++K+K G
Sbjct: 61 IVRIDLKAKMKQFAVAEQLLEDSPPEFKTELAYHTLLRNYADYQMAQKADALLEKLKGTG 120
Query: 168 SFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSME 227
+N +M LY G K+ ++L DMK +GVP D ++Y I ++ ++ ME
Sbjct: 121 ILTLPFAFNQMMLLYKRKGMMNKVTEILADMKTHGVPKDVYTYNILMDVKARSGDIEGME 180
Query: 228 NVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCED-IVSKSKDALGYNHLI 286
+ +E+ + ++ D T+ T+A + + AGL +KA YLK+ E+ V +++ A Y+ LI
Sbjct: 181 KIFEELSADENVKADAATFGTLATFCVHAGLLDKARSYLKEMEEGDVFRNRSA--YDILI 238
Query: 287 SHYASLGNKDEMMKFWGLQKIKCKKQL-NRDYITMLGSLVKIGELEEAEKMLEEWELSCY 345
S Y ++G+++ + + W +K+K + NR YIT++ + K+G +E+AE++ S
Sbjct: 239 SQYGAVGDQEGVERVW--EKVKSGPVVSNRSYITVIEAFGKLGMVEKAEELYGIMSKSKG 296
Query: 346 CYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
R N +L Y+++G++EKA+ +++++VK G+ ++ + GY + ++KA
Sbjct: 297 LILSRQFNSLLSAYARQGLMEKAEKLVEDMVKLGRKKNAVTYHHLVTGYLKTDQLDKALA 356
Query: 406 CMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNM--YHAL 463
MKEA ++ + +L+ S+LD + DV E +K + N+ Y+ L
Sbjct: 357 VMKEAQGDSKQGRSRLWVETLI-SVLDAYAERGDVISAEKQFQDIKKAYPRPNIQVYNIL 415
Query: 464 TEAHIRSGQEVDGLLESMKADDI 486
+A+I+S G L+ M AD +
Sbjct: 416 LKAYIKSRVPALGFLQRMLADKL 438
>gi|449479004|ref|XP_004155478.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 259
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 141/213 (66%), Gaps = 1/213 (0%)
Query: 33 PVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVS 92
P + L+ R+ GDP S+ VLDQWV EG+++++ +LQ++I+QLR+ RF HALQ+
Sbjct: 32 PSTEDTLFRRVYRAGDPRTSIVRVLDQWVEEGRQVNQSDLQKLIKQLRTFGRFNHALQLC 91
Query: 93 EWMSGQGLAFSVHDH-AVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREG 151
EW + H A+QL LI K RGLE AE YF+S+ + + K+YGALL+CYV
Sbjct: 92 EWERNERNKCPSPGHIAIQLHLISKARGLEQAEEYFSSIGESSRDHKVYGALLHCYVENK 151
Query: 152 LVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYR 211
+ ++ ++MQKM+E+G + L+YN ++ LY G+HEK+ +++ +M+E G+ + F+Y
Sbjct: 152 NLKKAEAIMQKMREVGFMKTPLSYNAMLNLYAQLGKHEKLDELVKEMEEMGIGHNRFTYN 211
Query: 212 ICINSYGARSELSSMENVLQEMESQSHISMDWG 244
+ +N+Y A S++++ME +L +ME+ ++ DW
Sbjct: 212 VRMNAYAAASDITNMEKLLSKMEADPLVATDWS 244
>gi|356565994|ref|XP_003551220.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g60770-like [Glycine max]
Length = 469
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 213/419 (50%), Gaps = 34/419 (8%)
Query: 71 ELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSL 130
E+ +++L RK ++ AL++SE M+ + + +V DHA+ LDL+ K RG+ +A+ YF +L
Sbjct: 66 EVNDTLKKLDDRKLYQLALKLSETMAKRNMIKTVRDHAIHLDLLAKARGITAAKNYFVNL 125
Query: 131 NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEK 190
+ K +GA+LNCY +E +++++ M+KMKE+ S++ YN ++ LYT GQ EK
Sbjct: 126 PESAKNHLCHGAILNCYCKEPMIEKAEGFMEKMKELSLPLSSMPYNSLIMLYTKVGQPEK 185
Query: 191 IPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVA 250
+ ++ +MK + + D+++Y + + + A +++SS+E V EM + + +
Sbjct: 186 VSSLIQEMKTSNIMLDSYTYNVWMRALAAVNDISSVERVHDEMMALTELE---------- 235
Query: 251 NYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCK 310
K A KD Y LI+ Y N E+ + W ++
Sbjct: 236 --------KRNAF-------------KDLTAYQFLITFYGXTSNLYEVFRVWRSLRLAFP 274
Query: 311 KQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADA 370
K N Y+ M+ LVK +L EK E E C YD RV N+++ Y++ M+EKA+
Sbjct: 275 KTANISYLNMIRVLVKSKDLLGEEKCFXEXECGCPTYDIRVVNVLIRAYAKLDMLEKAEE 334
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEEN-KFWRPKPSLVSS 429
+ + ++G P + I Y K N + +C+ EA+++ N + W P ++
Sbjct: 335 LKEHARRRGAKPNGKTLEIFMDYYLQKGNFKSTVDCLDEAISMGRWNGEKWVPXSKIIDI 394
Query: 430 ILDWLGDNRDVEEVEAFVSSLKIKVQKRN--MYHALTEAHIRSGQEVDGLLESMKADDI 486
++ +DV+ E F+ LK ++ ++ +LT + +G+ +L +K +++
Sbjct: 395 MMRNFEQEKDVDGAEEFLEILKKSMESPGVEVFESLTRTYAATGRISSAMLRRLKMENV 453
>gi|356554749|ref|XP_003545705.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Glycine max]
Length = 399
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 191/336 (56%), Gaps = 4/336 (1%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWM- 95
++L SRI L P S T VL +WVL+G I+ +L+ + ++LR +R+KHAL++SEWM
Sbjct: 49 DDLRSRIFRLRLPKRSATNVLQKWVLQGNPITLSQLRDISKELRRSQRYKHALEISEWMV 108
Query: 96 SGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDE 155
S + S D+AV++DL+ +V G+++AE YF L K + Y ALL+ Y L ++
Sbjct: 109 SNEEYELSDSDYAVRIDLMTQVFGIDAAERYFEGLPLATKTTETYTALLHSYAGAKLTEK 168
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
+ L Q++K+ AL YN +M LY + GQ EK+P V+ ++K+ V PD F+Y + I+
Sbjct: 169 AEELYQRIKDSNLSFDALTYNEMMTLYMSVGQFEKVPIVVEELKQQKVSPDIFTYNLWIS 228
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYI-IAGLKEKAIIYLKKCEDIVS 274
S A + + +L EM + + W Y +AN YI +A L + L + E ++
Sbjct: 229 SCAAILNIDEVRRILDEMSHGAGSNESWIRYLNLANIYISVAHLDNASSNTLVETEKRIT 288
Query: 275 KSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
+ + + Y+ LI Y LG+KD++ + W + +K ++R+Y+ ++ S + +G +E
Sbjct: 289 Q-RQWITYDFLIILYGGLGSKDKLDQIWNSLGMTKQKMISRNYMCIISSYLMLGLTKEVG 347
Query: 335 KMLEEWELSCYC-YDFRVPNIILLGYSQKGMIEKAD 369
+++++W+ S +D IL+ + G+ E A+
Sbjct: 348 EVIDQWKQSTTTDFDMLACKKILVAFRDIGLAEIAN 383
>gi|356525847|ref|XP_003531533.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Glycine max]
Length = 395
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 187/336 (55%), Gaps = 4/336 (1%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWM- 95
++L SRI L P S T VL +WVL+G ++ +L+ + ++LR +R+KHAL++SEWM
Sbjct: 45 DDLRSRIFRLRLPKRSATNVLQKWVLQGNPVTLSQLRDISKELRRSQRYKHALEISEWMV 104
Query: 96 SGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDE 155
S + S D+A ++DL KV G+++AE YF L K + Y ALL+ Y L +
Sbjct: 105 SHEEYELSDSDYAARIDLTTKVFGIDAAERYFEGLPLATKTAETYTALLHSYAGAKLTKK 164
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
+ L Q++K+ AL YN +M LY + GQ EK+P V+ ++K+ V PD F+Y + I+
Sbjct: 165 AEELYQRIKDSNLSFDALTYNEMMTLYMSVGQFEKVPSVVEELKQQKVSPDIFTYNLWIS 224
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG-LKEKAIIYLKKCEDIVS 274
A + + +L EM + + W Y +AN YI G L + L + E ++
Sbjct: 225 YCAAILNIDEVRRILDEMSHGAGSNESWIRYLNLANIYISVGHLDNASSNTLVETEKRIT 284
Query: 275 KSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
+ + + Y+ LI Y LG+KD++ + W ++ +K ++R+YI ++ S + +G +E
Sbjct: 285 Q-RQWITYDFLIILYGGLGSKDKLDQIWNSLRMTKQKMISRNYICIISSYLMLGHTKEVG 343
Query: 335 KMLEEWELSCYC-YDFRVPNIILLGYSQKGMIEKAD 369
+++++W+ S +D I++ + G+ E A+
Sbjct: 344 EVIDQWKQSTTTDFDMLACKKIMVAFRDMGLAEIAN 379
>gi|255563224|ref|XP_002522615.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538091|gb|EEF39702.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 426
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 193/353 (54%), Gaps = 10/353 (2%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWM- 95
++L SRI L P S T ++ WV EG ++ EL+ + +LR +R+KHAL++SEWM
Sbjct: 74 DDLKSRIFRLRLPKRSATNIIHNWVSEGNTVTASELRNISNELRKLQRYKHALEISEWMV 133
Query: 96 SGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDE 155
+ + D+A ++DL+ KV G+++AE YF L K + Y ALL+ Y + +
Sbjct: 134 TNKEFELMDFDYATRIDLMTKVFGIDAAERYFEGLPITVKTSETYTALLHSYAGVKQLGK 193
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
+ L +++K +AL YN +M LY + GQ EK+ V+ ++K + PD F+Y + I+
Sbjct: 194 AEELYERIKGSNLSFTALTYNEMMTLYMSVGQVEKVSLVVEELKRQKIAPDIFTYNLWIS 253
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG----LKEKAIIYLKKCED 271
S A + + +L EM+ S + DW Y +AN Y+ AG + A++ +K
Sbjct: 254 SCAAILNIDQVTRILDEMKHDSGCNDDWLRYIDIANIYVKAGHLVNTESSAVVEAEKS-- 311
Query: 272 IVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELE 331
++ + Y+ LI YA L +KD++ + W ++ +K NR+++ +L S + +G L+
Sbjct: 312 --ITQREWITYDFLIILYAGLRDKDKVDQIWKSLRMTKQKMTNRNFVCILSSYMMLGHLK 369
Query: 332 EAEKMLEEWELSCYC-YDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPT 383
EA ++L++W+ S +D + +L +S G+ E A+ ++++ PT
Sbjct: 370 EAGEVLDQWKKSTTTDFDLSACSRLLDAFSGSGLTEIANDFHMLLIERNCDPT 422
>gi|168006155|ref|XP_001755775.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693094|gb|EDQ79448.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 429
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 215/406 (52%), Gaps = 16/406 (3%)
Query: 89 LQVSEWMS-GQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCY 147
+++S+WM+ +G + + D+ V++DL K++ AE + E K + Y LL Y
Sbjct: 1 MEISDWMALEKGTKWELADNIVRIDLKSKMKQFTVAEQLLENSPPEFKTELAYHTLLKNY 60
Query: 148 VREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDN 207
V + ++ +L++K+K G ++N +M LY G K+P++L DMK +GVP D
Sbjct: 61 VDHQMAQKAGALLEKLKSTGLLTLPFSFNQMMLLYKRKGMENKLPEILEDMKAHGVPKDV 120
Query: 208 FSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLK 267
++Y I ++ ++ ME + +E+++ ++ D T+ T+A + AGL EKA +YLK
Sbjct: 121 YTYNILMDVKSRSGDIEGMEKIFEELKADENVKADAATFGTLATACVHAGLLEKAKVYLK 180
Query: 268 KCE--DIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQL-NRDYITMLGSL 324
+ E DI ++ Y+ LIS Y ++G+ D + + W +K+K + NR YIT++ +
Sbjct: 181 EMEEGDIF---RNRSAYDILISQYGAVGDVDGVERVW--EKVKSGPIVSNRSYITVIEAF 235
Query: 325 VKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTP 384
K+G +E+AE++ E S R N +L Y+++G+++KA+ ++ ++ K G+
Sbjct: 236 GKLGMVEKAEELYEVMSQSKGLILSRQFNSLLSAYTRQGLMDKAEKLMDDMEKLGRKKNA 295
Query: 385 NSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKP--SLVSSILDWLGDNRDVEE 442
++ + GY + ++KA MKEAL + K R KP + ++LD + +V
Sbjct: 296 ITYHHLVTGYLKTDQLDKAVAAMKEALV---DPKQGRSKPWFETLVAVLDAFAERGNVVN 352
Query: 443 VEAFVSSLKIKVQKRNM--YHALTEAHIRSGQEVDGLLESMKADDI 486
E +K + N+ Y+ L +A+I S G L M D +
Sbjct: 353 AEQQFQEIKKAYPRLNIQVYNILLKAYINSRVPALGFLHRMSTDKL 398
>gi|388490914|gb|AFK33523.1| unknown [Lotus japonicus]
Length = 358
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 171/291 (58%), Gaps = 3/291 (1%)
Query: 49 PDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWM-SGQGLAFSVHDH 107
P S T +L +WVLEG ++ EL+ + ++LR +R+KHAL++SEWM + + S D+
Sbjct: 62 PKRSATNILHKWVLEGNSVTVSELRDIAKELRRSQRYKHALEISEWMITHEEHGLSDSDY 121
Query: 108 AVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMG 167
A+++DL+ KV G+++AE YF +L K + Y ALL+ Y + +++ L Q++K+
Sbjct: 122 AMRIDLMTKVFGIDAAERYFEALPVAAKTSETYTALLHSYAGAKMTEKAEELYQRIKDSN 181
Query: 168 SFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSME 227
AL YN +M LY + GQ EK+P V+ ++K+ V PD F+Y + I+S A + +
Sbjct: 182 LSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVR 241
Query: 228 NVLQEMESQSHISMDWGTYSTVANYYIIAG-LKEKAIIYLKKCEDIVSKSKDALGYNHLI 286
+L EM + + W Y +AN Y+ A L + L + E +++S+ + Y+ LI
Sbjct: 242 RILDEMSHGADSNESWTRYLNLANVYVTASRLDNSSSNSLAETEKRITQSQ-WITYDFLI 300
Query: 287 SHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKML 337
YA LG+KD++ + W ++ +K +NR+Y ++ + + +G ++E ++L
Sbjct: 301 ILYAGLGSKDKLDQIWNSLRMTKQKMINRNYSCIISAYLMLGHVKEVVRLL 351
>gi|125532538|gb|EAY79103.1| hypothetical protein OsI_34209 [Oryza sativa Indica Group]
Length = 479
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 127/465 (27%), Positives = 225/465 (48%), Gaps = 89/465 (19%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVL-EGQKISELELQRVIRQLRSRKRFKHALQVSEWM 95
++L+ R++ DP + L+PVL+QW L E + I++ E+Q +I+ L R+RF ALQ+S WM
Sbjct: 82 DSLFRRVAAAADPRLPLSPVLEQWCLAEERPIAKPEIQSIIKYLCRRRRFSQALQLSMWM 141
Query: 96 SGQ-GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVD 154
+ + L S D A +L+LI KV GL+ A YF+S+ D+ K + YG+LL CY V+
Sbjct: 142 TERLHLHLSPGDVANRLELITKVHGLDRAVEYFDSMPDQLKQQQCYGSLLKCYAEANCVE 201
Query: 155 ESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICI 214
++ L +KM+ MG S ++Y + +
Sbjct: 202 KAEELFEKMRGMGMASS------------------------------------YAYNVMM 225
Query: 215 NSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY--------L 266
Y ++ + ++ Q ME +S I D T T ++A L++K + +
Sbjct: 226 RLYLQNGQVERVHSMHQAME-ESGIVPDVSTTHT-----LVAVLRKKKTLVAAYVVAEDI 279
Query: 267 KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVK 326
K E+++ K+ N Y+ +G L+K
Sbjct: 280 KAIENVLEKANSC----------------------------------NSMYMCRIGVLLK 305
Query: 327 IGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNS 386
+ ++ AEK EEWE +D R+ N+++ Y ++G+++KA+A++ + +KKG+ P N+
Sbjct: 306 MNDMVGAEKAYEEWESKHVYHDSRLINLLVDAYCKEGLMDKAEALVDQFIKKGRMPFANT 365
Query: 387 WSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAF 446
+A GY + KA + K+ALA + W P + V L++ + ++VE E
Sbjct: 366 CYKLAGGYFKVGQVSKAADLTKKALA--SASNEWIPDLTNVLMSLNYFAEQKNVEAAEEM 423
Query: 447 VSSL-KIKVQKRNMYHALTEAHIRSGQEVDGLLESMKADDIDEDK 490
S L ++ R++YH L + ++ +G+ V LL+ MK D ++ D+
Sbjct: 424 ASLLQRLITPTRDIYHGLLKTYVNAGKPVSDLLDRMKKDGMEADE 468
>gi|115482780|ref|NP_001064983.1| Os10g0501000 [Oryza sativa Japonica Group]
gi|113639592|dbj|BAF26897.1| Os10g0501000, partial [Oryza sativa Japonica Group]
Length = 451
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/465 (27%), Positives = 225/465 (48%), Gaps = 89/465 (19%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVL-EGQKISELELQRVIRQLRSRKRFKHALQVSEWM 95
++L+ R++ DP + L+PVL+QW L E + +++ E+Q +I+ L R+RF ALQ+S WM
Sbjct: 54 DSLFRRVAAAADPRLPLSPVLEQWCLAEERHVAKPEVQSIIKYLCRRRRFSQALQLSMWM 113
Query: 96 SGQ-GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVD 154
+ + L S D A +L+LI KV GL+ A YF+S+ D+ K + YG+LL CY V+
Sbjct: 114 TERLHLHLSPGDVANRLELITKVYGLDRAVEYFDSMPDQLKQQQCYGSLLKCYAEANCVE 173
Query: 155 ESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICI 214
++ L +KM+ MG S ++Y + +
Sbjct: 174 KAEELFEKMRGMGMASS------------------------------------YAYNVMM 197
Query: 215 NSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY--------L 266
Y ++ + ++ Q ME +S I D T T ++A L++K + +
Sbjct: 198 RLYLQNGQVERVHSMHQAME-ESGIVPDVSTTHT-----LVAVLRKKKTLVAAYVVAEDI 251
Query: 267 KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVK 326
K E+++ K+ N Y+ +G L+K
Sbjct: 252 KAIENVLEKANSC----------------------------------NSMYMCRIGVLLK 277
Query: 327 IGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNS 386
+ ++ AEK EEWE +D R+ N+++ Y ++G+++KA+A++ + +KKG+ P N+
Sbjct: 278 MNDMVGAEKAYEEWESKHVYHDSRLINLLVDAYCKEGLMDKAEALVDQFIKKGRMPFANT 337
Query: 387 WSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAF 446
+A GY + KA + K+ALA + W P + V L++ + ++VE E
Sbjct: 338 CYKLAGGYFKVGQVSKAADLTKKALA--SASNEWIPDLTNVLMSLNYFAEQKNVEAAEEM 395
Query: 447 VSSL-KIKVQKRNMYHALTEAHIRSGQEVDGLLESMKADDIDEDK 490
+S L ++ R++YH L + ++ +G+ V LL MK D ++ D+
Sbjct: 396 MSLLQRLVTPTRDIYHGLLKTYVNAGKPVSDLLHRMKKDGMEADE 440
>gi|297835552|ref|XP_002885658.1| hypothetical protein ARALYDRAFT_899047 [Arabidopsis lyrata subsp.
lyrata]
gi|297331498|gb|EFH61917.1| hypothetical protein ARALYDRAFT_899047 [Arabidopsis lyrata subsp.
lyrata]
Length = 737
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 133/467 (28%), Positives = 226/467 (48%), Gaps = 37/467 (7%)
Query: 35 ARN-NLYSRISPLGDPDVSLTPVLDQWVL---EGQKISELELQRVIRQLRSRKRFKHALQ 90
ARN L SRI + +T VL+QW +G++++ ++ V+ LR +R + AL+
Sbjct: 19 ARNLTLQSRIEAALEKKAEITTVLEQWRQQQEQGKQLNPSLVRGVVENLRDSQRCREALE 78
Query: 91 VSEWMSGQGLAFSV-HDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVR 149
VS WM Q + + D + LI V GLE A + S+ + + + +Y +LL+ YVR
Sbjct: 79 VSNWMIVQKICNLIPEDFTTRFHLIENVFGLEEAGNFVESIPENLRNESIYNSLLSSYVR 138
Query: 150 EGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNT--GQHEKIPDVLLDMKENGVPPDN 207
+D++ S +KM+E+G A YN + LY G K+ ++L +MKE+ + D
Sbjct: 139 RNDLDKAESTFKKMRELGLLLRASPYNSMTSLYRRIPHGNRCKVDEILREMKESNIKLDR 198
Query: 208 FSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLK 267
+ + Y + +++ME L E E + +DW T +A Y+ +G K KA L+
Sbjct: 199 DTVNNALRVYADVTHIATMEKFLAEWEGNT--PLDWLTRLDMAKAYLRSGFKGKAKEMLR 256
Query: 268 KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKI 327
+ E++ +D Y L+ Y G + ++ + W L K K K+ N + ++GSL+K+
Sbjct: 257 RTEEL----RDPKSYEELMRLYGEAGGRKDVYRVWDLYK-KLSKKDNEGFRALIGSLLKL 311
Query: 328 GELEEAEKM-LEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK--------- 377
++ AE+ +EWE S +D R+P +++ Y +KGM+EKAD ++KEI+K
Sbjct: 312 DDINGAEEFYYKEWECSGLPFDVRIPTMLVSSYREKGMVEKADKLIKEIMKNEESVKPIT 371
Query: 378 --------KGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSS 429
KG P+ + D N KA E K N F + + +
Sbjct: 372 PLLESLERKGNVVKPSELRDLIKNLCDSNQFYKALEASKWMSTKTSFNLFPQDYAARLHM 431
Query: 430 ILDWLGDNRDVEEVEAFVS-SLKIKVQKRNMYHALTEAHIRSGQEVD 475
I + LG EE E F S+ ++ +Y L + +S + +D
Sbjct: 432 IENVLG----FEEAEKFFERSIPENMKDDYVYGTLLSCYAKSHKTLD 474
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 179/334 (53%), Gaps = 19/334 (5%)
Query: 53 LTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSV--HDHAVQ 110
+TP+L+ +G + EL+ +I+ L +F AL+ S+WMS + +F++ D+A +
Sbjct: 370 ITPLLESLERKGNVVKPSELRDLIKNLCDSNQFYKALEASKWMSTKT-SFNLFPQDYAAR 428
Query: 111 LDLIGKVRGLESAETYF-NSLNDEDKVDKLYGALLNCYVR-EGLVDESLSLMQKMKEMGS 168
L +I V G E AE +F S+ + K D +YG LL+CY + +D++ ++ +KM ++G
Sbjct: 429 LHMIENVLGFEEAEKFFERSIPENMKDDYVYGTLLSCYAKSHKTLDKAEAIFEKMGDLGF 488
Query: 169 FGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMEN 228
+N ++ LY+ G+ EK+ +++ MK + PD+ + + Y +++ +M+
Sbjct: 489 LSKPSPFNSMISLYSQLGKREKVENLISKMKCMNIEPDSLTMNNVLRMYADETDIKTMDK 548
Query: 229 VLQE-MESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLIS 287
+E + ++ + ++ T +AN Y AGL KAI +++SK+ + + L +
Sbjct: 549 YKREWINAEKNTKLEMRTMVAMANAYERAGLLLKAI--------EITRSKNEV--HRLWN 598
Query: 288 HYASLGNKDEMMKFWGLQKIKCKKQL-NRDYITMLGSLVKIGELEEAEKMLEEWELSCYC 346
Y ++ + L KC+ + + +Y +++ SL+K+ +L+ AE++ EWE
Sbjct: 599 EYKEKEKRNYKIDDANL--CKCRSAVGDEEYQSVISSLLKLDDLKGAEEIYGEWEPEGPE 656
Query: 347 YDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGK 380
++ R+P +I+ Y ++G K V+ +KK K
Sbjct: 657 FNTRIPCLIISRYCKEGDEVKVREVVYSSIKKRK 690
>gi|357163843|ref|XP_003579864.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Brachypodium distachyon]
Length = 422
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 183/345 (53%), Gaps = 3/345 (0%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
++L S I L S T LD+W EG+ EL+RV R L +R+KHAL+V+EWM
Sbjct: 68 DDLRSLIFRLRLAKRSATEALDRWAGEGRAAPAPELRRVARDLSRARRYKHALEVAEWMK 127
Query: 97 GQGLA-FSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDE 155
+ S +D+ V++DLI KV G +AE +F L E K + Y ALL+ Y R + D+
Sbjct: 128 THHESDLSENDYGVRIDLITKVFGANAAEDFFEKLPSEAKSLEAYTALLHSYARSKMTDK 187
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
+ L ++MK+ L YN +M LY + G+ +K+P V ++K V PD F+Y + I+
Sbjct: 188 AERLFERMKDADLSIDVLVYNEMMTLYISVGELDKVPAVAEELKRQNVSPDLFTYNLRIS 247
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK 275
+ A +L + +L EM + + W Y +A Y+ A + L + E +S+
Sbjct: 248 ASAASMDLEIFKGILDEMSKDPNSNEGWTLYRNLATIYVNASQLVSSGNSLVEAEAKISQ 307
Query: 276 SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEK 335
++ + Y+ LI + LGN + + W ++ ++ +R+YI +L S + G+L++A++
Sbjct: 308 -REWITYDFLILLHTGLGNLERVKDIWKSMQMTSQRMTSRNYICVLSSYLMCGQLKDAKE 366
Query: 336 MLEEWELS-CYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
++++W+ S +D N + G + AD+ + +++K
Sbjct: 367 IVDQWQRSKAPEFDISACNRLFDALLGAGFTDTADSFRELMLQKS 411
>gi|297842839|ref|XP_002889301.1| hypothetical protein ARALYDRAFT_477224 [Arabidopsis lyrata subsp.
lyrata]
gi|297335142|gb|EFH65560.1| hypothetical protein ARALYDRAFT_477224 [Arabidopsis lyrata subsp.
lyrata]
Length = 597
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 125/440 (28%), Positives = 221/440 (50%), Gaps = 11/440 (2%)
Query: 49 PDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWM-SGQGLAFSVHDH 107
P +S+ LD+WV EG +I+ +E+ + + QLR R+ + ALQ+SEW+ + + + + D+
Sbjct: 141 PGLSIGSALDKWVEEGNEITRVEVAKAMLQLRRRRMYGRALQLSEWLEANKKIEMNERDY 200
Query: 108 AVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMG 167
+ +LDL K+RGLE+ E Y + K + +Y LL V G V +S + +MK++G
Sbjct: 201 SSRLDLTVKIRGLENGEAYMQKIPKSFKGEVIYRTLLANCVAAGNVKKSELVFNRMKDLG 260
Query: 168 SFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSME 227
S + ++ LY +KI DVLL M++ V P +Y+I I+ GA +++S ME
Sbjct: 261 FPLSGFTCDQMLLLYKRI-DRKKIADVLLLMEKENVKPSLLTYKILIDVKGATNDISGME 319
Query: 228 NVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLIS 287
+L+ M+ + + D+ T + A +Y AGLKEKA LK+ E S + + L+S
Sbjct: 320 QILETMKDEG-VQPDFQTQALTAKHYSGAGLKEKAEKVLKEMEG-ESLEANRRAFKDLLS 377
Query: 288 HYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCY 347
YASLG +DE+ + W KI K + + + + K+ +++EAE + E+
Sbjct: 378 IYASLGREDEVTRIW---KICESKPYFDESLAAIHAFGKLNKVQEAEAIFEKIVTMGRRA 434
Query: 348 DFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECM 407
+++L Y M+ K ++K + + G +W + Y + +EKA + M
Sbjct: 435 SSNTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEKA-DSM 493
Query: 408 KEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKR-NMYHALTEA 466
+ + K + GD + E++ F+ ++ R + AL +A
Sbjct: 494 LDKASKQSHTKLMMNSFMYIMDEYSKRGDVHNTEKI--FLKMREVGYTSRLRQFQALLQA 551
Query: 467 HIRSGQEVDGLLESMKADDI 486
+I + G+ + MKAD+I
Sbjct: 552 YINAKAPAYGMRDRMKADNI 571
>gi|224137686|ref|XP_002322619.1| predicted protein [Populus trichocarpa]
gi|222867249|gb|EEF04380.1| predicted protein [Populus trichocarpa]
Length = 472
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 133/451 (29%), Positives = 223/451 (49%), Gaps = 25/451 (5%)
Query: 49 PDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLA-FSVHDH 107
P VS+ VLD+WV EG+ + +LE+ + LR R+ F ALQ+SEW+ F D+
Sbjct: 16 PGVSVHSVLDKWVAEGRDLDQLEISNAMFNLRKRRLFGRALQLSEWVEANKRKDFDERDY 75
Query: 108 AVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMG 167
A +LDLI KVRGL+ AE Y + K + +Y LL V +++ + KMK++
Sbjct: 76 ASRLDLIAKVRGLQKAEVYIEKIPKSLKGEVIYRTLLANCVSANNAKKAVEVFNKMKDLE 135
Query: 168 SFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSME 227
+ +YN ++ LY + +KI DVLL M++ V P F+Y + I++ G ++++ ME
Sbjct: 136 LPITLFSYNQLLLLYKRHDK-KKIADVLLSMEKENVKPSLFTYILLIDTKGQSNDIAGME 194
Query: 228 NVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLIS 287
+ + M+++ I D T + +A +Y+ GLKEKA I LK+ E + + ++
Sbjct: 195 QIAETMKAEG-IEPDIKTQAIMARHYVSGGLKEKAEIVLKEMEG-GNLEEHRWACQFMLP 252
Query: 288 HYASLGNKDEMMKFWGLQKIKCKKQLNRD----YITMLGSLVKIGELEEA-EKMLEEW-E 341
Y +LG DE+ + W CKK D I G L KI E E E M + W +
Sbjct: 253 LYGTLGKADEVSRLWKF----CKKSPRLDECMAAIEAWGQLKKIPEAEAVFELMSKTWKK 308
Query: 342 LSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNME 401
LS Y + +L Y+ M+ K ++K++ G P +W + Y + +E
Sbjct: 309 LSSKHY-----SALLKVYANNKMLSKGKDLIKQMGDSGCRIGPLTWDALIKLYVEAGEVE 363
Query: 402 KAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK-IKVQKRN-M 459
KA + +A+ ++N+ +P S I++ D+ E ++ Q R+
Sbjct: 364 KADSILNKAV---QQNQM-KPMFSSYMIIMEKYAKKGDIHNAEKMFHRMRQAGYQARSKQ 419
Query: 460 YHALTEAHIRSGQEVDGLLESMKADDIDEDK 490
+ L +A+I + G+ E +KAD + +K
Sbjct: 420 FQTLIQAYINAKAPCYGMRERLKADGLFANK 450
>gi|115436130|ref|NP_001042823.1| Os01g0301500 [Oryza sativa Japonica Group]
gi|57899055|dbj|BAD87829.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113532354|dbj|BAF04737.1| Os01g0301500 [Oryza sativa Japonica Group]
gi|222618277|gb|EEE54409.1| hypothetical protein OsJ_01440 [Oryza sativa Japonica Group]
Length = 484
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 195/358 (54%), Gaps = 18/358 (5%)
Query: 32 KPVARNNLYSRISPLGDP--DVSLTPVLDQWVLEGQK--ISELELQRVIRQLRSRKRFKH 87
+P+ R R+ LGD + S++ VLD+WV EG++ I+ +L + R L KR H
Sbjct: 44 RPLGR-----RLLELGDAAGEGSVSRVLDEWVREGREEAIAAADLAKCARDLHKVKRDAH 98
Query: 88 ALQVSEWM-SGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLND--EDKVDKLYGALL 144
AL++ +WM + +G++ + +A+ L+L+ V G+E+AE YF+ + D+ + YGALL
Sbjct: 99 ALELMDWMVNTKGMSMTYARYALHLELLYSVYGIEAAEEYFSGIPSFTRDQNHRTYGALL 158
Query: 145 NCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVP 204
NCY + +++ ++ ++M E+G S N +M LY GQH K+ ++ +MKE V
Sbjct: 159 NCYCSAKMEEKATNIYRRMDELGIPSSTKLMNNLMGLYLELGQHSKVANLFDEMKERNVQ 218
Query: 205 PDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAII 264
PD + I + S+ A +++ +++ M S + W + T+ + Y+ AG+ E+A +
Sbjct: 219 PDELTCCILMRSHAAHNKIDTVKETFYNM-SLLDVPKQWSIFRTLGSIYMNAGMVEEAEL 277
Query: 265 YLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR---DYITML 321
+ ++ + + L+ +AS+GN + + W + IK NR Y+ ML
Sbjct: 278 AFMRAQEFLGFDHGRHPFYFLMRQFASIGNLRGVNRVW--KDIKMTFSYNRTNFSYLLML 335
Query: 322 GSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
L K+G+ + +++ +EWE YD R+ N++ + + GM +A+ + +++ ++G
Sbjct: 336 QCLYKLGDTDRMKEIYKEWEYRYENYDPRLTNMLTRAHLRNGMTNEAELLWEKVKERG 393
>gi|242073288|ref|XP_002446580.1| hypothetical protein SORBIDRAFT_06g018360 [Sorghum bicolor]
gi|241937763|gb|EES10908.1| hypothetical protein SORBIDRAFT_06g018360 [Sorghum bicolor]
Length = 415
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 184/344 (53%), Gaps = 3/344 (0%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
++L SRI LG S T LD+W EG+ EL+R+ R L +R+KHAL+V++WM
Sbjct: 61 DDLRSRIFRLGLAKRSATAALDKWSGEGRAAPAAELRRIARDLSRVRRYKHALEVADWMK 120
Query: 97 GQGLA-FSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDE 155
+ S D+ +++DLI KV G +AE +F L K + Y ALL+ Y R + D+
Sbjct: 121 THHESDLSESDYGMRIDLITKVFGASAAEDFFEKLPPGAKSLEAYTALLHSYGRSKMTDK 180
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
+ L ++MK+ AL YN +M LY + G+ +K+ + ++K V PD F+Y + ++
Sbjct: 181 AERLFERMKDANLSMDALVYNEMMTLYISVGELDKVEIIAEELKRQNVSPDLFTYNLRVS 240
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK 275
+ A +L + +L EM + W Y +A+ Y+ A + L + E +S+
Sbjct: 241 AAAASMDLEGFKGILDEMSKDPNSKEGWTLYRNLASVYVDASQLVGSGNSLVEAEAKISQ 300
Query: 276 SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEK 335
++ + Y+ L+ +A LGN++ + W + ++ +R+YI ++ S + G+L++A +
Sbjct: 301 -REWITYDFLVILHAGLGNQERIKDIWKSMVMTSQRMTSRNYICVISSYLMCGQLKDAGE 359
Query: 336 MLEEWELS-CYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
++++W+ S +D N +L G+ + AD + +++K
Sbjct: 360 IVDQWQRSKAPEFDISACNRLLDALLSAGLTDTADRFRELMLQK 403
>gi|148906608|gb|ABR16456.1| unknown [Picea sitchensis]
Length = 600
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 128/440 (29%), Positives = 216/440 (49%), Gaps = 13/440 (2%)
Query: 51 VSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQ-GLAFSVHDHAV 109
+ L L+QW+ +G ++ E+ LR+R+ FK L+VS+W+ G+ + D+A
Sbjct: 144 IDLPSSLEQWLADGNVLTRREVVITFVHLRNRRMFKRLLKVSDWLEGKKPFKKTERDYAS 203
Query: 110 QLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSF 169
+LD+I K+ G+ E YF S+ + + + YG LL Y V+++ + +KMK G
Sbjct: 204 RLDVITKILGIFKGEKYFASIPSDMRGQRAYGTLLANYSSTCNVEKAEEIFKKMKAEGFS 263
Query: 170 GSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENV 229
+A YN ++ LY + +KI DVL M++ GV P F+Y+I I+ G ++ ME V
Sbjct: 264 LTAFEYNQLLLLYKRLDK-KKIQDVLKMMEDEGVKPTIFTYKILIDVKGWMGDIGGMEQV 322
Query: 230 LQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHY 289
+ M+S+ I MD GT +A +YI AGL EKA + LK+ E++ K K + L+ Y
Sbjct: 323 AENMKSED-IEMDSGTLELLARHYIRAGLAEKAEVVLKELENVSLKDKRSR-LKMLLPLY 380
Query: 290 ASLGNKDEMMKFWGLQKIKCKKQLNRD-YITMLGSLVKIGELEEAEKMLEEWELSCYCYD 348
A LG E+ + W + + L D Y T + + K+G++E+AE E+ S
Sbjct: 381 AELGKPTEVERIW--KDFEAFPALRLDEYATGVVAWGKLGQIEKAEITFEKLLNSGKKLS 438
Query: 349 FRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMK 408
+ N +L Y+ ++ K ++K + G T P W + + + +EKA +
Sbjct: 439 AKHYNALLNVYADHHLLLKGKELVKRMSDNGCTIEPPIWDALIRLHVNAGELEKADSILF 498
Query: 409 EALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK--VQKRNMYHALTEA 466
+A K RPK + +IL+ + DV E ++ + +L ++
Sbjct: 499 KAC----NQKQLRPKYWTMVTILEKYAERGDVANAEKIFDRMRQAGYTGSAGAFASLLKS 554
Query: 467 HIRSGQEVDGLLESMKADDI 486
+ + G E MKAD I
Sbjct: 555 YANARVPAYGFRERMKADKI 574
>gi|326504724|dbj|BAK06653.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326523789|dbj|BAJ93065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 179/330 (54%), Gaps = 3/330 (0%)
Query: 52 SLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLA-FSVHDHAVQ 110
S T L++W EG+ EL+R+ R L +R+KHAL+V+EWM + S +D+ V+
Sbjct: 80 SATEALEKWAGEGRAAPAPELRRIARDLSRARRYKHALEVAEWMKTHHESDLSENDYGVR 139
Query: 111 LDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFG 170
+DLI KV G +AE +F L K + Y ALL+ Y R ++D++ L Q+MK+
Sbjct: 140 IDLITKVFGANAAEDFFEKLPPAAKSLEAYTALLHSYARSKMIDKAERLFQRMKDADLPI 199
Query: 171 SALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVL 230
L YN +M LY + G+ +K+P + ++K V PD F+Y + I++ A +L + + +L
Sbjct: 200 DVLVYNEMMTLYISVGELDKVPILAEELKRQNVSPDLFTYNLRISASVASMDLEAFKGIL 259
Query: 231 QEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYA 290
EM + + W Y +A+ Y+ A + L + E +S+ ++ + Y+ L+ +A
Sbjct: 260 DEMSKDPNSNEGWMLYRNLASIYVDASQLVSSGNSLVEAEAKISQ-REWITYDLLVILHA 318
Query: 291 SLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYC-YDF 349
LGN D + W ++ ++ +R+Y+ +L + + G+L++A +++++W+ S +D
Sbjct: 319 GLGNLDRVKDIWKSMQMTAQRMTSRNYVCVLSAYLMCGQLKDAAEVVDQWQRSKVPEFDV 378
Query: 350 RVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
N + G + AD+ + +++K
Sbjct: 379 SACNRLFDALLAAGFTDTADSFRELMLQKS 408
>gi|297806979|ref|XP_002871373.1| hypothetical protein ARALYDRAFT_487758 [Arabidopsis lyrata subsp.
lyrata]
gi|297317210|gb|EFH47632.1| hypothetical protein ARALYDRAFT_487758 [Arabidopsis lyrata subsp.
lyrata]
Length = 410
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/333 (31%), Positives = 183/333 (54%), Gaps = 15/333 (4%)
Query: 24 FTRAYRAVKPVA---------RNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQR 74
F+++Y A + +++L SRI L P S T VL++WV EG +I+ EL+
Sbjct: 34 FSKSYNADAAIGGSLVEESEEKDDLKSRIFRLRLPKRSATTVLERWVGEGNQITINELRE 93
Query: 75 VIRQLRSRKRFKHALQVSEWM-SGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE 133
+ ++LR +R KHAL+V+EWM + L S D+A ++DLI KV G+++AE YF L+ +
Sbjct: 94 ISKELRRTRRHKHALEVTEWMVQHEELKVSDADYASRIDLISKVFGIDAAERYFEGLHID 153
Query: 134 DKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGS--FGSALNYNGIMCLYTNTGQHEKI 191
K + Y +LL+ Y + + +L +++ E S FG A+ YN +M LY + GQ EK+
Sbjct: 154 AKTTETYTSLLHAYAGSKQTERAEALFKRIIETDSLSFG-AITYNEMMTLYMSVGQVEKV 212
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
P+V+ +K V PD F+Y + ++S A + + +L+EM + + W Y + +
Sbjct: 213 PEVIQVLKHKKVSPDIFTYNLWLSSCAATFNIDELRRILEEMRHDASSNEGWVRYINLTS 272
Query: 252 YYIIAGLKEKA-IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCK 310
YI + A + E +S+ ++ + Y+ L+ + LGNK + + W +
Sbjct: 273 IYINSSRVTNAESTSPVEAEKSISQ-REWITYDFLMILHTGLGNKVMIDQIWKSLGNTNQ 331
Query: 311 KQLNRDYITMLGSLVKIGELEEAEKMLEEWELS 343
K +R YI +L S + +G L EAE+++ +W+ S
Sbjct: 332 KLSSRSYICVLSSYLMLGHLREAEEIIHQWKES 364
>gi|413950397|gb|AFW83046.1| hypothetical protein ZEAMMB73_939845 [Zea mays]
Length = 453
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 168/351 (47%), Gaps = 38/351 (10%)
Query: 81 SRKRFKHALQVSEWM-SGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL 139
S +R++ AL++ WM S L S DHA +LDLI K AE Y+N L
Sbjct: 120 SERRYEQALEIFSWMESCSSLRLSSWDHAARLDLIAKAYSTSQAEEYYNKLQSPATRQAA 179
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
LL+CYV E HEK+ V+ MK
Sbjct: 180 SFPLLHCYVMER-----------------------------------DHEKVLSVIDLMK 204
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
N + + SY + +N+ S + S+++V Q M + + + W TY T+AN + GL
Sbjct: 205 RNNIHRNVLSYNLWMNACAEVSGVDSVQSVFQVMLNDETVKVGWSTYCTLANIFRKNGLN 264
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
+A L K E +S + LGY+ +++ YA+L + D +M+ W K + L Y+
Sbjct: 265 TEAQACLVKAEAKLSPT-GRLGYSFVMTCYAALNDSDGVMRMWEASKSVPGRILTAYYMA 323
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
+ +K+G++ +AE + +WE C +D RV N++L Y + IEKA+ + +++KG
Sbjct: 324 AMSCSIKVGDISQAECIFGKWEAGCRKHDVRVSNVLLGAYVRNRWIEKAERLHLHMLEKG 383
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSI 430
P +W I+ GY M+KA CMK+ L++ ++ WRP L+ +I
Sbjct: 384 ACPNYKTWEILMEGYVQSRQMDKAVGCMKKGLSL-LKSCHWRPPVELMEAI 433
>gi|326520694|dbj|BAJ92710.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 178/330 (53%), Gaps = 3/330 (0%)
Query: 52 SLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLA-FSVHDHAVQ 110
S T L++W EG+ EL+R+ R L +R+KHAL+V+EWM + S +D+ V+
Sbjct: 80 SATEALEKWAGEGRAAPAPELRRIARDLSRARRYKHALEVAEWMKTHHESDLSENDYGVR 139
Query: 111 LDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFG 170
+DLI KV G +AE +F L K + Y ALL+ Y R ++D++ L Q+MK+
Sbjct: 140 IDLITKVFGANAAEDFFEKLPPAAKSLEAYTALLHSYARSKMIDKAERLFQRMKDADLPI 199
Query: 171 SALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVL 230
L YN +M LY + G+ +K+P + ++K V PD F+Y + I++ A +L + + +L
Sbjct: 200 DVLVYNEMMTLYISVGELDKVPILAEELKRQNVSPDLFTYNLRISASVASMDLEAFKGIL 259
Query: 231 QEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYA 290
EM + + W Y +A+ Y+ A + L + E +S+ ++ + Y+ L+ +A
Sbjct: 260 DEMSKDPNSNEGWMLYRNLASIYVDASQLVSSGNSLVEAEAKISQ-REWITYDLLVILHA 318
Query: 291 SLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYC-YDF 349
LGN D + W ++ ++ +R+Y+ +L + + G+L++A ++++W+ S +D
Sbjct: 319 GLGNLDRVKDIWKSMQMTAQRMTSRNYVCVLSAYLMCGQLKDAAGVVDQWQRSKVPEFDV 378
Query: 350 RVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
N + G + AD+ + +++K
Sbjct: 379 SACNRLFDALLAAGFTDTADSFRELMLQKS 408
>gi|18415979|ref|NP_568214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75165070|sp|Q94B59.1|PP372_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g09450, mitochondrial; Flags: Precursor
gi|14596093|gb|AAK68774.1| putative protein [Arabidopsis thaliana]
gi|27311913|gb|AAO00922.1| putative protein [Arabidopsis thaliana]
gi|332004012|gb|AED91395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 409
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 188/335 (56%), Gaps = 19/335 (5%)
Query: 24 FTRAYRAVKPVA---------RNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQR 74
F+++Y A + +++L SRI L P S T VL++W+ EG +++ EL+
Sbjct: 33 FSKSYNADAAIGNSLVEESEEKDDLKSRIFRLRLPKRSATTVLEKWIGEGNQMTINELRE 92
Query: 75 VIRQLRSRKRFKHALQVSEWM-SGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE 133
+ ++LR +R+KHAL+V+EWM + S D+A ++DLI KV G+++AE YF L+ +
Sbjct: 93 ISKELRRTRRYKHALEVTEWMVQHEESKISDADYASRIDLISKVFGIDAAERYFEGLDID 152
Query: 134 DKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGS--FGSALNYNGIMCLYTNTGQHEKI 191
K + Y +LL+ Y + + +L +++ E S FG A+ YN +M LY + GQ EK+
Sbjct: 153 SKTAETYTSLLHAYAASKQTERAEALFKRIIESDSLTFG-AITYNEMMTLYMSVGQVEKV 211
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
P+V+ +K+ V PD F+Y + ++S A + + +L+EM + + W Y + +
Sbjct: 212 PEVIEVLKQKKVSPDIFTYNLWLSSCAATFNIDELRKILEEMRHDASSNEGWVRYIDLTS 271
Query: 252 YYIIAGLKEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCK 310
YI + A L + E +S+ ++ + Y+ L+ + LGNK + + W + ++
Sbjct: 272 IYINSSRVTNAESTLPVEAEKSISQ-REWITYDFLMILHTGLGNKVMIDQIW--KSLRNT 328
Query: 311 KQL--NRDYITMLGSLVKIGELEEAEKMLEEWELS 343
Q+ +R YI +L S + +G L EAE+++ +W+ S
Sbjct: 329 NQILSSRSYICVLSSYLMLGHLREAEEIIHQWKES 363
>gi|218188053|gb|EEC70480.1| hypothetical protein OsI_01546 [Oryza sativa Indica Group]
Length = 484
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 194/358 (54%), Gaps = 18/358 (5%)
Query: 32 KPVARNNLYSRISPLGDP--DVSLTPVLDQWVLEGQK--ISELELQRVIRQLRSRKRFKH 87
+P+ R R+ LGD + S++ VLD+WV EG++ I+ +L + R L KR H
Sbjct: 44 RPLGR-----RLLELGDAAGEGSVSRVLDEWVREGREEAIAAADLAKCARDLHKVKRDAH 98
Query: 88 ALQVSEWM-SGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLND--EDKVDKLYGALL 144
AL++ +WM + +G++ + +A+ L+L+ V G+E+AE YF+ + D+ + YGALL
Sbjct: 99 ALELMDWMVNTKGMSMTYARYALHLELLYSVYGIEAAEEYFSGIPSFTRDQNHRTYGALL 158
Query: 145 NCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVP 204
NCY + +++ ++ ++M E+G S N +M LY GQH K ++ +MKE V
Sbjct: 159 NCYCSAKMEEKATNIYRRMDELGIPSSTKLMNNLMGLYLELGQHSKAANLFDEMKERNVQ 218
Query: 205 PDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAII 264
PD + I + S+ A +++ +++ M S + W + T+ + Y+ AG+ E+A +
Sbjct: 219 PDELTCCILMRSHAAHNKIDTVKETFYNM-SLLDVPKQWSIFRTLGSIYMNAGMVEEAEL 277
Query: 265 YLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR---DYITML 321
+ ++ + + L+ +AS+G+ + + W + IK NR Y+ ML
Sbjct: 278 AFMRAQEFLGFDHGRHPFYFLMRQFASIGSLRGVNRVW--KDIKMTFSYNRTNFSYLLML 335
Query: 322 GSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
L K+G+ + +++ +EWE YD R+ N++ + + GM +A+ + +++ ++G
Sbjct: 336 QCLYKLGDTDRMKEIYKEWEYRYENYDPRLTNMLTRAHLRNGMTNEAELLWEKVKERG 393
>gi|21592522|gb|AAM64472.1| unknown [Arabidopsis thaliana]
Length = 409
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 188/335 (56%), Gaps = 19/335 (5%)
Query: 24 FTRAYRAVKPVA---------RNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQR 74
F+++Y A + +++L SRI L P S T VL++W+ EG +++ EL+
Sbjct: 33 FSKSYNADAAIGNSLVEESEEKDDLKSRIFRLRLPKRSATTVLEKWIGEGNQMTINELRE 92
Query: 75 VIRQLRSRKRFKHALQVSEWM-SGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE 133
+ ++LR +R+KHAL+V+EWM + S D+A ++DLI KV G+++AE YF L+ +
Sbjct: 93 ISKELRRTRRYKHALEVTEWMVQHEESKISDADYASRIDLISKVFGIDAAERYFEGLHID 152
Query: 134 DKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGS--FGSALNYNGIMCLYTNTGQHEKI 191
K + Y +LL+ Y + + +L +++ E S FG A+ YN +M LY + GQ EK+
Sbjct: 153 SKTAETYTSLLHAYAASKQTERAEALFKRIIESDSLTFG-AITYNEMMTLYMSVGQVEKV 211
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
P+V+ +K+ V PD F+Y + ++S A + + +L+EM + + W Y + +
Sbjct: 212 PEVIEVLKQKKVSPDIFTYNLWLSSCAATFNIDELRKILEEMRHDASSNEGWVRYIDLTS 271
Query: 252 YYIIAGLKEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCK 310
YI + A L + E +S+ ++ + Y+ L+ + LGNK + + W + ++
Sbjct: 272 IYINSSRVTNAESTLPVEAEKSISQ-REWITYDFLMILHTGLGNKVMIDQIW--KSLRNT 328
Query: 311 KQL--NRDYITMLGSLVKIGELEEAEKMLEEWELS 343
Q+ +R YI +L S + +G L EAE+++ +W+ S
Sbjct: 329 NQILSSRSYICVLSSYLMLGHLREAEEIIHQWKES 363
>gi|15220095|ref|NP_178143.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42572199|ref|NP_974190.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|145327755|ref|NP_001077853.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75262222|sp|Q9C977.1|PP135_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g80270, mitochondrial; Flags: Precursor
gi|12324975|gb|AAG52431.1|AC018848_2 hypothetical protein; 8785-10851 [Arabidopsis thaliana]
gi|17064898|gb|AAL32603.1| Unknown protein [Arabidopsis thaliana]
gi|20259918|gb|AAM13306.1| unknown protein [Arabidopsis thaliana]
gi|332198258|gb|AEE36379.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332198259|gb|AEE36380.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332198260|gb|AEE36381.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 129/450 (28%), Positives = 224/450 (49%), Gaps = 31/450 (6%)
Query: 49 PDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWM-SGQGLAFSVHDH 107
P +S+ LD+WV EG +I+ +E+ + + QLR R+ + ALQ+SEW+ + + + + D+
Sbjct: 140 PGLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTERDY 199
Query: 108 AVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMG 167
A +LDL K+RGLE E + K + LY LL V G V +S + KMK++G
Sbjct: 200 ASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNVKKSELVFNKMKDLG 259
Query: 168 SFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSME 227
S + ++ L+ +KI DVLL M++ + P +Y+I I+ GA +++S ME
Sbjct: 260 FPLSGFTCDQMLLLHKRI-DRKKIADVLLLMEKENIKPSLLTYKILIDVKGATNDISGME 318
Query: 228 NVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLIS 287
+L+ M+ + + +D+ T + A +Y AGLK+KA LK+ E S + + L+S
Sbjct: 319 QILETMKDEG-VELDFQTQALTARHYSGAGLKDKAEKVLKEMEG-ESLEANRRAFKDLLS 376
Query: 288 HYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLE-----EWEL 342
YASLG +DE+ + W KI K + + + + K+ +++EAE + E +
Sbjct: 377 IYASLGREDEVKRIW---KICESKPYFEESLAAIQAFGKLNKVQEAEAIFEKIVKMDRRA 433
Query: 343 SCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEK 402
S Y +++L Y M+ K ++K + + G +W + Y + +EK
Sbjct: 434 SSSTY-----SVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEK 488
Query: 403 AFECMKEALAVHEENKFWRPKPSLVS--SILDWLGDNRDVEEVEAFVSSLKIK----VQK 456
A + +A +K K + S I+D DV E LK++ +
Sbjct: 489 ADSLLDKA------SKQSHTKLMMNSFMYIMDEYSKRGDVHNTEKIF--LKMREAGYTSR 540
Query: 457 RNMYHALTEAHIRSGQEVDGLLESMKADDI 486
+ AL +A+I + G+ + +KAD+I
Sbjct: 541 LRQFQALMQAYINAKSPAYGMRDRLKADNI 570
>gi|449437710|ref|XP_004136634.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
gi|449506005|ref|XP_004162626.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 606
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 125/449 (27%), Positives = 216/449 (48%), Gaps = 23/449 (5%)
Query: 51 VSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQG-LAFSVHDHAV 109
+S++ LD+WV EG ++S ++ + LR R+ F ALQ SEW+ G L F+ +D+A
Sbjct: 150 LSVSSALDKWVSEGNELSWDDISSTMMSLRRRRMFGKALQFSEWLEASGQLEFNENDYAS 209
Query: 110 QLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSF 169
+LDLI KV+GL AE+Y + + + +Y LL YV V+++ + KMK++
Sbjct: 210 RLDLIAKVQGLHKAESYIAKIPKSFQGEVMYRTLLANYVAANNVNKAEEVFNKMKDLEFP 269
Query: 170 GSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENV 229
+ YN ++ LY + KI DVLL M++ V P F+Y+I I++ G ++S ME V
Sbjct: 270 MTTFAYNQVLVLYKRNDRR-KIADVLLLMEKENVKPSPFTYKILIDAKGLSKDISGMEQV 328
Query: 230 LQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHY 289
+ M+++ I +D +A +Y+ GLK+KA LK+ E+I SK L+ Y
Sbjct: 329 VDTMKAEG-IELDVFALCLLAKHYVSCGLKDKAKATLKEMEEINSKG-SRWPCRLLLPLY 386
Query: 290 ASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEA-EKMLEEW-----ELS 343
L +DE+ + W + + + I G L I E E+ +K+++ W
Sbjct: 387 GELEMEDEVRRLWEICEANPHIEECMAAIVAWGKLKNIHEAEKIFDKVVKTWPKKKISTK 446
Query: 344 CYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
YC +V Y M+ K ++ ++ + G + P +W + Y + +EKA
Sbjct: 447 HYCTMIKV-------YGDCKMLTKGKELVNQMAESGYSIDPLAWDAVVKLYVEAGEVEKA 499
Query: 404 FECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKR--NMYH 461
+ +A+ +E RP ++++ DV E ++ N +
Sbjct: 500 DTFLVKAVKKYEM----RPLYCSYRTLMNHYARRGDVHNAEKIFYKMRQSGYGPWFNQFE 555
Query: 462 ALTEAHIRSGQEVDGLLESMKADDIDEDK 490
L +A++ S G+ E M AD + +K
Sbjct: 556 TLIQAYVNSKTPAYGMRERMMADKLFPNK 584
>gi|224089975|ref|XP_002308888.1| predicted protein [Populus trichocarpa]
gi|222854864|gb|EEE92411.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 133/447 (29%), Positives = 220/447 (49%), Gaps = 27/447 (6%)
Query: 50 DVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWM-SGQGLAFSVHDHA 108
DVS+ VLD+WV EG+ + LE+ + LR R+ F ALQ+SEW + + F D+A
Sbjct: 100 DVSVQSVLDKWVAEGKDLDRLEISNAMINLRKRRMFGRALQLSEWFEANKPQEFVERDYA 159
Query: 109 VQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALL-NCYVREGLVDESLSLMQKMKEMG 167
+LDLI KVRGL AE Y + + K + +Y LL NC V V ++ + KM+++
Sbjct: 160 SRLDLIAKVRGLHKAEVYIDKIPKSFKGEVIYRTLLANCVVDHN-VKKAEEVFNKMRDLE 218
Query: 168 SFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSME 227
+ N ++ LY + +KI DVLL M++ V P F+Y+I I++ G ++++ M+
Sbjct: 219 FPITPFACNQLLLLYKRLDK-KKIADVLLLMEKENVKPSLFTYKILIDTKGQSNDMTGMD 277
Query: 228 NVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLIS 287
+++ M+++ I D T + +A +Y+ GLKEKA LK+ E + + ++
Sbjct: 278 QIVETMKAEG-IEPDIRTQAIMARHYVSGGLKEKAEAILKEMEG-GNLEEHRWACRFMLP 335
Query: 288 HYASLGNKDEMMKFWGLQKIKCKKQLNRD----YITMLGSLVKIGELEEA-EKMLEEW-E 341
Y +LG DE+ + W C+K D I G L KI E E E M + W +
Sbjct: 336 LYGALGKADEVSRVWKF----CEKSPRLDECMAAIEAWGRLKKIDEAEAVFELMSKTWKK 391
Query: 342 LSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNME 401
LS Y + +L Y+ M+ K ++K + G P +W + Y + +E
Sbjct: 392 LSSRHY-----STLLKVYANHKMLSKGKDLIKRMGDSGCRIGPLTWDALVKLYVEAGEVE 446
Query: 402 KAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK-IKVQKR-NM 459
KA + +A+ ++NK +P S I++ D+ E ++ Q R
Sbjct: 447 KADSILNKAV---QQNKI-KPMYSSFLIIMERYATKGDIHNAEKMFHRMRQAGYQARIRQ 502
Query: 460 YHALTEAHIRSGQEVDGLLESMKADDI 486
+ L +A+I + G+ E +KAD I
Sbjct: 503 FQTLIQAYIIAKAPCYGMRERLKADGI 529
>gi|21740710|emb|CAD40831.1| OSJNBa0086B14.3 [Oryza sativa Japonica Group]
gi|116310079|emb|CAH67100.1| H0818E04.17 [Oryza sativa Indica Group]
Length = 430
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 183/344 (53%), Gaps = 3/344 (0%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
++L SR+ L S T L++W EG+ S EL+ + R L R+KHAL+V+EWM
Sbjct: 76 DDLRSRVFRLRLAKRSATAALERWAGEGRAASAAELRGIARDLSRAGRYKHALEVAEWMK 135
Query: 97 GQGLA-FSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDE 155
+ S +D+ +++DLI +V G +AE +F L + + Y ALL+ Y R + D+
Sbjct: 136 THHESDLSENDYGMRIDLITRVFGANAAEDFFEKLPACVQSLEAYTALLHSYARSKMTDK 195
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
+ L ++MK+ + L YN +M LY + G+ +K+P + ++K PD F+Y + I+
Sbjct: 196 AERLFKRMKDANLSMNILVYNEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYNLRIS 255
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK 275
+ A +L + +L EM + + W Y +A Y+ AG + L + E +S+
Sbjct: 256 ASAASMDLEGFKGILDEMSKDPNSNEGWKLYQNLAVIYVDAGQLVGSGNSLVEAEAKISR 315
Query: 276 SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEK 335
++ + Y+ L+ + LGN+D + W + ++ +R+YI +L S + G+L++A +
Sbjct: 316 -REWITYDFLVILHTGLGNRDRIKDIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKDAGE 374
Query: 336 MLEEWELS-CYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
++++W+ S +D N + + G + A++ + +++K
Sbjct: 375 VIDQWQRSKAPEFDISACNRLFDAFLNAGFTDTANSFRELMLQK 418
>gi|125590560|gb|EAZ30910.1| hypothetical protein OsJ_14991 [Oryza sativa Japonica Group]
Length = 471
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 183/344 (53%), Gaps = 3/344 (0%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
++L SR+ L S T L++W EG+ S EL+ + R L R+KHAL+V+EWM
Sbjct: 117 DDLRSRVFRLRLAKRSATAALERWAGEGRAASAAELRGIARDLSRAGRYKHALEVAEWMK 176
Query: 97 GQGLA-FSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDE 155
+ S +D+ +++DLI +V G +AE +F L + + Y ALL+ Y R + D+
Sbjct: 177 THHESDLSENDYGMRIDLITRVFGANAAEDFFEKLPACVQSLEAYTALLHSYARSKMTDK 236
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
+ L ++MK+ + L YN +M LY + G+ +K+P + ++K PD F+Y + I+
Sbjct: 237 AERLFKRMKDANLSMNILVYNEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYNLRIS 296
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK 275
+ A +L + +L EM + + W Y +A Y+ AG + L + E +S+
Sbjct: 297 ASAASMDLEGFKGILDEMSKDPNSNEGWKLYQNLAVIYVDAGQLVGSGNSLVEAEAKISR 356
Query: 276 SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEK 335
++ + Y+ L+ + LGN+D + W + ++ +R+YI +L S + G+L++A +
Sbjct: 357 -REWITYDFLVILHTGLGNRDRIKDIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKDAGE 415
Query: 336 MLEEWELS-CYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
++++W+ S +D N + + G + A++ + +++K
Sbjct: 416 VIDQWQRSKAPEFDISACNRLFDAFLNAGFTDTANSFRELMLQK 459
>gi|125548508|gb|EAY94330.1| hypothetical protein OsI_16098 [Oryza sativa Indica Group]
Length = 430
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 183/344 (53%), Gaps = 3/344 (0%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
++L SR+ L S T L++W EG+ S EL+ + R L R+KHAL+V+EWM
Sbjct: 76 DDLRSRVFRLRLAKRSATAALERWAGEGRAASAAELRGIARDLSRAGRYKHALEVAEWMK 135
Query: 97 GQGLA-FSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDE 155
+ S +D+ +++DLI +V G +AE +F L + + Y ALL+ Y R + D+
Sbjct: 136 THHESDLSENDYGMRIDLITRVFGANAAEDFFEKLPACVQSLEAYTALLHSYARSKMTDK 195
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
+ L ++MK+ + L YN +M LY + G+ +K+P + ++K PD F+Y + I+
Sbjct: 196 AERLFKRMKDANLSMNILVYNEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYNLRIS 255
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK 275
+ A +L + +L EM + + W Y +A Y+ AG + L + E +S+
Sbjct: 256 ASAASMDLEGFKGILDEMSKDPNSNEGWKLYQNLAVIYVDAGQLVGSGNSLVEAEAKISQ 315
Query: 276 SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEK 335
++ + Y+ L+ + LGN+D + W + ++ +R+YI +L S + G+L++A +
Sbjct: 316 -REWITYDFLVILHTGLGNRDRIKDIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKDAGE 374
Query: 336 MLEEWELS-CYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
++++W+ S +D N + + G + A++ + +++K
Sbjct: 375 VIDQWQRSKAPEFDISACNRLFDAFLNAGFTDTANSFRELMLQK 418
>gi|307136025|gb|ADN33879.1| DNA-binding protein [Cucumis melo subsp. melo]
Length = 608
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 123/453 (27%), Positives = 223/453 (49%), Gaps = 29/453 (6%)
Query: 49 PDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQG-LAFSVHDH 107
P +S+T LD+WV EG ++S ++ + LR R+ F ALQ SEW+ G L F+ D+
Sbjct: 152 PALSVTSALDKWVSEGHELSRDDISSTMFGLRKRRMFGKALQFSEWLEASGQLEFNEADY 211
Query: 108 AVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMG 167
A LDLI KV+GL AETY + + + + +Y LL YV V ++ + +MK++
Sbjct: 212 ASHLDLIAKVQGLHKAETYIAKIPNSFRGEAVYRTLLANYVLANDVKKAEEVFNRMKDLE 271
Query: 168 SFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSME 227
+ Y+ ++ LY + +I D+L M++ V P F+Y+I I++ G +++S ME
Sbjct: 272 FPMTTFAYDQMLILYKRIDRR-RIADILSLMEKENVKPRPFTYKILIDAKGLSNDISGME 330
Query: 228 NVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLIS 287
V+ M+++ I +D T +A +Y++ GLK+KA+ LK E++ SK +L+
Sbjct: 331 QVVDTMKAEG-IKLDVDTLLLLAKHYVLGGLKDKAMPILKATEEVNSKGS-RWPCRYLLP 388
Query: 288 HYASLGNKDEMMKFWGLQKIKCKKQLN-RDYITMLGSLVKIGELEEAEKMLEE----WE- 341
Y L +DE+ + W + C+ N + + + + K+ ++EAEK+ + W+
Sbjct: 389 LYGELQMEDEVRRLWEI----CEPNPNVEECMAAIVAWGKLKNIQEAEKIFDRVVKTWKR 444
Query: 342 LSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNME 401
LS Y + ++ Y M+ K ++ ++ K G P W + Y + +E
Sbjct: 445 LSTKHY-----STMIKVYGDSKMLTKGKELVNQMAKSGCRIDPMIWDAVVKLYVEAGEVE 499
Query: 402 KAFECMKEALAVHEENKFWRPKPSLVS--SILDWLGDNRDVEEVEAFVSSLKIKVQKRNM 459
KA + +A+ K + KP S +++ DV E ++ +
Sbjct: 500 KADSFLFKAV------KQYGMKPLFDSYRTLMVHYARKGDVHNSEKIFHKIRQSGYPTHF 553
Query: 460 --YHALTEAHIRSGQEVDGLLESMKADDIDEDK 490
+ L +A++ + G+ E M AD++ +K
Sbjct: 554 GQFVTLVQAYLNAKTPAYGMRERMMADNVFPNK 586
>gi|357439923|ref|XP_003590239.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479287|gb|AES60490.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 128/441 (29%), Positives = 224/441 (50%), Gaps = 18/441 (4%)
Query: 51 VSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWM-SGQGLAFSVHDHAV 109
+S+ LD+WV +G+++S E+ + LR RK + ALQ +W+ S + L F+ ++A
Sbjct: 153 LSVDSALDKWVEKGKELSRQEIGLALNSLRRRKMYGRALQALDWLESNKKLEFTEKEYAS 212
Query: 110 QLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALL-NCYVREGLVDESLSLMQKMKEMGS 168
+LDLI K+RGL AE Y + + + + LY LL NC E L ++ KM+E+G
Sbjct: 213 KLDLIAKLRGLPKAEKYLEHVPNSFRGELLYRTLLANCASLENL-RKTEETFNKMRELGF 271
Query: 169 FGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMEN 228
+A N ++ L +KI DVLL M++ V P +++Y+I I+ G +++ M
Sbjct: 272 PVTAFACNQLL-LIYKKIDKKKIADVLLMMEKENVKPSSYTYKILIDVKGLSNDIDGMSQ 330
Query: 229 VLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISH 288
+++ M+++ +D T +++A +Y AGL EK LK+ E K ++ L+
Sbjct: 331 IVETMKAEG-CELDHLTRASLARHYAAAGLTEKTEAILKEIEGENLK-ENMWVCPTLLRL 388
Query: 289 YASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEA-EKMLEEWELSCYCY 347
YA LG DE+ + W + + K + + I G L KI E E E M +W+L+ Y
Sbjct: 389 YAILGRADEVERIWKVCESKPRVEDCLAAIEAWGRLKKIEEAEAVFEMMSNKWKLTARNY 448
Query: 348 DFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECM 407
+ +L Y + M+ K ++K + G T P +W + + Y +EKA +
Sbjct: 449 ES-----LLKIYIRHKMLNKGKDLIKTMGDSGCTIGPTTWDALVSLYVQAGEVEKADTVL 503
Query: 408 KEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK--VQKRNMYHALTE 465
++AL ++NK +P + +I++ DV E L+ + + + +HAL +
Sbjct: 504 QKAL---QQNKM-KPMFTTFMTIMEQYAKRGDVHNAEKIFYRLRQANYISRISPFHALAQ 559
Query: 466 AHIRSGQEVDGLLESMKADDI 486
A+ + G+ E MKAD++
Sbjct: 560 AYKNAKLPAYGIRERMKADNL 580
>gi|449506011|ref|XP_004162628.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 613
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 124/450 (27%), Positives = 225/450 (50%), Gaps = 22/450 (4%)
Query: 49 PDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQG-LAFSVHDH 107
P ++++ LD+WV EG+++S ++ + LR + + ALQ SEW+ G L F D+
Sbjct: 156 PGLTVSSALDKWVSEGKELSRDDISSAMLNLRKCRMYGKALQFSEWLEANGKLDFVEKDY 215
Query: 108 AVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALL-NCYVREGLVDESLSLMQKMKEM 166
A +LDLIGK+RGL AE Y + + + +Y LL NC + V ++ + KMK++
Sbjct: 216 ASRLDLIGKLRGLRMAENYIAKIPKSFQGEVVYRTLLANCVIACN-VQKAEEVFNKMKDL 274
Query: 167 GSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSM 226
+A N ++ LY T + K+ D+LL M++ V P F+YRI I++ G ++++ M
Sbjct: 275 EFPITAFACNQLLLLYKRTDKR-KVADILLLMEKENVKPSRFTYRILIDTKGLSNDITGM 333
Query: 227 ENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLI 286
E V+ M+++ I +D T S +A +YI GLK+KA LK+ E+I S+ L+
Sbjct: 334 EQVVDTMKAEG-IELDVSTLSVLAKHYISGGLKDKAKAILKEMEEINSEG-SRWPCRILL 391
Query: 287 SHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGEL---EEAEKMLEEWELS 343
Y L +DE+ + W + C N + ++V G+L +EAEK+ + +
Sbjct: 392 PLYGELQMEDEVRRLWEI----CGS--NPHIEECMAAIVAWGKLKNIQEAEKIFDRVVKT 445
Query: 344 CYCYDFRVPNIILLGYSQKG-MIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEK 402
R + +L Y + M+ K V+K++ + G P + + Y + +EK
Sbjct: 446 GEKLSARHYSTMLNVYREDSKMLTKGKEVVKQMAESGSRMDPVTLDAVVKLYVEAGEVEK 505
Query: 403 AFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKI--KVQKRNMY 460
A + + + +++ +P + +++D DV E ++ V + + +
Sbjct: 506 ADSFLVKTVLQYKK----KPMFTTYITLMDRYASRGDVPNAEKIFGMMRKYGYVGRLSQF 561
Query: 461 HALTEAHIRSGQEVDGLLESMKADDIDEDK 490
L +A++ + G+ E MKAD + +K
Sbjct: 562 QTLIQAYVNAKAPAYGMRERMKADSVFPNK 591
>gi|297729245|ref|NP_001176986.1| Os12g0527850 [Oryza sativa Japonica Group]
gi|255670359|dbj|BAH95714.1| Os12g0527850 [Oryza sativa Japonica Group]
Length = 313
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/257 (34%), Positives = 147/257 (57%), Gaps = 4/257 (1%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
+ L R+ L P S VL +W EG+ + + +L RV+R+LR +RFKHAL++ EWM
Sbjct: 28 DTLGRRLLKLIYPKRSAAVVLRRWAEEGRTVQKYQLNRVVRELRKYRRFKHALEICEWMR 87
Query: 97 GQG-LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDE 155
Q + DHAV LDL+ KVRGL SAE +F + + K ALL+ YV+ G D+
Sbjct: 88 TQPEMRLLPGDHAVHLDLVAKVRGLPSAEKFFEDMPERAKGPSTCNALLHAYVQHGRRDK 147
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
+ +++++M + G AL +N +M LY ++G+ EK+P+++ +++ + PD +Y I +
Sbjct: 148 AEAMLEEMAKAGYLTCALPFNHMMSLYMSSGELEKVPEMIKELRRYTI-PDLVTYNIWLT 206
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK 275
++ + + E V M+ + + DW T+S + + YI AGL K L + E S+
Sbjct: 207 YCSKKNSVKAAEKVYDLMKDERVVP-DWMTFSLLGSIYINAGLHVKGRDALVEMEKRASR 265
Query: 276 SKDALGYNHLISHYASL 292
+ A Y+ L++ YASL
Sbjct: 266 KERA-AYSSLLTLYASL 281
>gi|357439973|ref|XP_003590264.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479312|gb|AES60515.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 557
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 129/445 (28%), Positives = 226/445 (50%), Gaps = 18/445 (4%)
Query: 51 VSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWM-SGQGLAFSVHDHAV 109
+S+ LD+WV +G+++S E+ + LR RK + ALQ +W+ S + L F+ ++A
Sbjct: 104 LSVDSALDKWVEKGKELSRQEIGLALNSLRRRKMYGRALQALDWLESNKKLEFTEKEYAS 163
Query: 110 QLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALL-NCYVREGLVDESLSLMQKMKEMGS 168
+LDLI K+RGL AE Y + + + + LY LL NC E L ++ KM+E+G
Sbjct: 164 KLDLIAKLRGLPKAEKYLEHVPNSFRGELLYRTLLANCASLENL-RKTEETFNKMRELGF 222
Query: 169 FGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMEN 228
+A N ++ L +KI DVLL M++ V P +++Y+I I+ G +++ M
Sbjct: 223 PVTAFACNQLL-LIYKKIDKKKIADVLLMMEKENVKPSSYTYKILIDVKGLSNDIDGMSQ 281
Query: 229 VLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISH 288
+++ M+++ +D T +++A +Y AGL EK LK+ E K ++ L+
Sbjct: 282 IVETMKAEG-CELDHLTRASLARHYAAAGLTEKTEAILKEIEGENLK-ENMWVCPTLLRL 339
Query: 289 YASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEA-EKMLEEWELSCYCY 347
YA LG DE+ + W + + K + + I G L KI E E E M +W+L+ Y
Sbjct: 340 YAILGRADEVERIWKVCESKPRVEDCLAAIEAWGRLKKIEEAEAVFEMMSNKWKLTARNY 399
Query: 348 DFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECM 407
+ +L Y + M+ K ++K + G T P +W + + Y +EKA +
Sbjct: 400 ES-----LLKIYIRHKMLNKGKDLIKTMGDSGCTIGPTTWDALVSLYVQAGEVEKADTVL 454
Query: 408 KEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK--VQKRNMYHALTE 465
++AL ++NK +P + +I++ DV E L+ + + + +HAL +
Sbjct: 455 QKAL---QQNKM-KPMFTTFMTIMEQYAKRGDVHNAEKIFYRLRQANYISRISPFHALAQ 510
Query: 466 AHIRSGQEVDGLLESMKADDIDEDK 490
A+ + G+ E MKAD++ +K
Sbjct: 511 AYKNAKLPAYGIRERMKADNLFPNK 535
>gi|297844450|ref|XP_002890106.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297335948|gb|EFH66365.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 594
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 124/442 (28%), Positives = 223/442 (50%), Gaps = 19/442 (4%)
Query: 51 VSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS-GQGLAFSVHDHAV 109
+S+ LD+WV +G+ S E + QLR R+ + ALQ++EW+ + D+A
Sbjct: 140 LSVGSALDKWVEQGKDTSRTEFASAMLQLRKRRMYGRALQMTEWLDDNKQFEMKERDYAS 199
Query: 110 QLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSF 169
+LDLI KVRGL E Y ++ + + + +Y LL+ YV V + ++ KMK++G
Sbjct: 200 RLDLISKVRGLYKGEAYIETIPESFRGELVYRTLLSNYVATSNVRTAEAVFNKMKDLGFP 259
Query: 170 GSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENV 229
S N ++ LY + +KI DVLL M++ + P+ +Y+I I++ G ++++ ME +
Sbjct: 260 LSTFTCNQMLILYKRVDK-KKIADVLLLMEKENLKPNLNTYKILIDTKGLSNDITGMEQI 318
Query: 230 LQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHY 289
++ M+S+ + D + +A Y AGLKEKA LK+ E S ++ Y L+S Y
Sbjct: 319 VETMKSEG-VEPDLRARALIARNYASAGLKEKAEKVLKEMEG-ESLEENRHVYKDLLSVY 376
Query: 290 ASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDF 349
L DE+ + W KI +K + + + + KI +++EAE + E+ +
Sbjct: 377 GFLQRADEVTRIW---KICEEKPRYNESLAAILAFGKIDKVKEAEAVFEKMLKMSHRVSS 433
Query: 350 RVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
V +++L Y M+ + ++K+++ G + + Y + +EKA + +
Sbjct: 434 NVYSVLLRVYVDHKMVSEGKDLVKQMLDSGCNIGALTLDAVIKLYLEAGEVEKAESSLSK 493
Query: 410 ALAVHEENKFWRPKPSLVSSILDWLGD---NRDVEEVEAFVSSLK-IKVQKR-NMYHALT 464
A+ ++K +P L+SS + +G+ DV E +K Q R Y AL
Sbjct: 494 AI----QSKQIKP---LMSSFMYVMGEYVRRGDVHNTEKIFQRMKQFGYQSRFRTYQALI 546
Query: 465 EAHIRSGQEVDGLLESMKADDI 486
+A++ + G+ + MKAD+I
Sbjct: 547 QAYVNAKAPAYGMKDRMKADNI 568
>gi|125599572|gb|EAZ39148.1| hypothetical protein OsJ_23575 [Oryza sativa Japonica Group]
Length = 610
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 118/449 (26%), Positives = 218/449 (48%), Gaps = 13/449 (2%)
Query: 46 LGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS-GQGLAFSV 104
L P SL VLD+W+ +G ++ + V+ L+ + ++ ALQ EWM G+ L F
Sbjct: 153 LDAPSNSLRHVLDKWIEDGNQLERNDAMLVLFHLKKQHMYRKALQFVEWMERGKLLNFEK 212
Query: 105 HDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMK 164
D+A LDLI + G+E+A+ Y + + + LY L+ V G + ++ + +++K
Sbjct: 213 RDYACHLDLIARSHGIETAQKYIKRVPLPFRNEVLYETLIVNCVLAGDIQKAEEVFKEIK 272
Query: 165 EMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELS 224
++ + N ++ LY K+ VL+ M++ V P F+YR+ I+ G ++L+
Sbjct: 273 DLCLRLTVTLCNQMILLYKRIAPG-KVASVLMLMEKENVKPSAFTYRLLIDLKGRSNDLA 331
Query: 225 SMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGY-N 283
+E VL EM++ I T + VA +YI GL EKA +K+ E +S SKD
Sbjct: 332 GIEVVLNEMKAYG-IEPSTSTQTMVARFYIHGGLTEKAEAVVKEMEAQLSNSKDGRHVIK 390
Query: 284 HLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELS 343
L+ YA+L +++ + W + C + + D+++ + + ++G +E+AE+ E +
Sbjct: 391 SLLHLYAALNKPNDVARIWEM----CTEPMLEDFLSAIKAWGELGLIEKAEETFEAMANA 446
Query: 344 CYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
+ N +L Y+Q ++ K ++ + + G P +W + Y + +EKA
Sbjct: 447 PEKLSSKYYNAMLNVYAQNKLLSKGKQFVERMCRDGCPNGPLTWDALINLYVNSGEVEKA 506
Query: 404 FECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK-IKVQKRNMYHA 462
+ L V EEN +P + ++ D+ E LK + R +++A
Sbjct: 507 DSFL---LNVAEENPDRKPLFTSYFFLMKGYAKRGDIHNTEKIFDRLKNVGYAPRPLHYA 563
Query: 463 -LTEAHIRSGQEVDGLLESMKADDIDEDK 490
L EA++ + G LE M+ D++ K
Sbjct: 564 VLLEAYVNAKVPAHGFLERMRGDNVRPTK 592
>gi|449506007|ref|XP_004162627.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 124/450 (27%), Positives = 219/450 (48%), Gaps = 23/450 (5%)
Query: 49 PDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQG-LAFSVHDH 107
PD S+ L +WV +G K+S ++ + LR R+ F+ ALQ SEW+ G L F+ D+
Sbjct: 154 PDFSVASALVKWVSQGNKLSRDDISSTMISLRRRQMFRKALQFSEWLEANGQLEFNERDY 213
Query: 108 AVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMG 167
A ++ LI KV+GL AE+Y + + + ++ ALL YV V+++ + K+K++
Sbjct: 214 ASRVHLIAKVQGLHKAESYIAKIPKSFQGEVVHRALLANYVVANNVEKAEEVFNKIKDLE 273
Query: 168 SFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSME 227
S YN ++ LY + KI DVLL M++ + P F+Y+I I+ G +++S ME
Sbjct: 274 FPMSIFAYNQMLVLYKKIDRR-KIADVLLLMEKENIKPCPFTYKILIDGKGLSNDISGME 332
Query: 228 NVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLIS 287
V+ M+++ I +D T S +A +Y+ GLK KA LK+ E+ S L L+
Sbjct: 333 QVVDSMKAEG-IELDVSTLSLLAKHYVSCGLKVKAKAILKEIEETNSNGPQWLC-RILLP 390
Query: 288 HYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGEL---EEAEKMLEEWELSC 344
Y L +DE+ + W + C + N + ++V G+L +EAEK+ + +
Sbjct: 391 FYGKLQMEDEVRRLWEI----C--EANPHIEECMAAIVAWGQLKNVQEAEKIFDRVVKTW 444
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
R +I++ Y M+ K V+ ++ + G + + I Y + +EKA
Sbjct: 445 KKLSARHYSIMMNVYRDSKMLTKGKEVVNQMAESGCHIDLLTCNAIVKLYVEAGEVEKAD 504
Query: 405 ECMKEALAVHEENKFWRPKPSLVS--SILDWLGDNRDVEEVEAFVSSLKIK--VQKRNMY 460
+ +A+ K + KP S +++D DV E ++ + + +
Sbjct: 505 SFLVKAV------KKYGMKPLFTSYKTLMDHYARRGDVHNAEKIFDKMRQSSYIPRLGQF 558
Query: 461 HALTEAHIRSGQEVDGLLESMKADDIDEDK 490
L +A++ + G+ E M AD + +K
Sbjct: 559 GTLIQAYVNAKTPAYGMRERMMADKVFPNK 588
>gi|125557709|gb|EAZ03245.1| hypothetical protein OsI_25393 [Oryza sativa Indica Group]
Length = 610
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/449 (26%), Positives = 218/449 (48%), Gaps = 13/449 (2%)
Query: 46 LGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS-GQGLAFSV 104
L P SL VLD+W+ +G ++ + V+ L+ + ++ ALQ EWM G+ L F
Sbjct: 153 LDAPSNSLRHVLDKWIEDGNQLERNDAMLVLFHLKKQHMYRKALQFVEWMERGKLLNFEK 212
Query: 105 HDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMK 164
D+A LDLI + G+E+A+ Y + + + LY L+ V G + ++ + +++K
Sbjct: 213 RDYACHLDLIARSHGIETAQKYIKRVPLPFRNEVLYETLIVNCVLAGDIQKAEEVFKEIK 272
Query: 165 EMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELS 224
++ + N ++ LY K+ VL+ M++ V P F+YR+ I+ G ++L+
Sbjct: 273 DLCLRLTVTLCNQMILLYKRIAPG-KVASVLMLMEKENVKPSAFTYRLLIDLKGRSNDLA 331
Query: 225 SMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGY-N 283
+E V+ EM++ I T + VA +YI GL EKA +K+ E +S SKD
Sbjct: 332 GIEVVINEMKAYG-IEPSTSTQTMVARFYIHGGLTEKAEAVVKEMEAQLSNSKDGRHVIK 390
Query: 284 HLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELS 343
L+ YA+L +++ + W + C + + D+++ + + ++G +E+AE+ E +
Sbjct: 391 SLLHLYAALNKPNDVARIWEM----CTEPMLEDFLSAIKAWGELGLIEKAEETFEAMANA 446
Query: 344 CYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
+ N +L Y+Q ++ K ++ + + G P +W + Y + +EKA
Sbjct: 447 PEKLSSKYYNAMLNVYAQNKLLSKGKQFVERMCRDGCPNGPLTWDALINLYVNSGEVEKA 506
Query: 404 FECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK-IKVQKRNMYHA 462
+ L V EEN +P + ++ D+ E LK + R +++A
Sbjct: 507 DSFL---LNVAEENPDRKPLFTSYFFLMKGYAKRGDIHNTEKIFDRLKNVGYAPRPLHYA 563
Query: 463 -LTEAHIRSGQEVDGLLESMKADDIDEDK 490
L EA++ + G LE M+ D++ K
Sbjct: 564 VLLEAYVNAKVPAHGFLERMRGDNVRPTK 592
>gi|356534606|ref|XP_003535844.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Glycine max]
Length = 600
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 133/455 (29%), Positives = 227/455 (49%), Gaps = 28/455 (6%)
Query: 46 LGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWM-SGQGLAFSV 104
L P +S+ L +W +G+++S E+ +R+LR RK + A Q+ +W+ S + L F
Sbjct: 142 LNAPGLSVDSALSKWAGQGKELSRKEIFLAVRELRRRKMYGRAFQLFQWLESNKKLEFME 201
Query: 105 HDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALL-NCYVREGLVDESLSLMQKM 163
D+A QLDLI K+RGL AE Y S+ + + + LY LL NC + L+ S + KM
Sbjct: 202 SDYASQLDLIAKLRGLPQAEKYIESVPESFRGELLYRTLLANCASQNNLI-ASEKIFNKM 260
Query: 164 KEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSEL 223
K++ + N ++ LY +KI DVLL M++ V P F+YRI I+S G +++
Sbjct: 261 KDLDLPLTVFACNQLLLLYKKL-DKKKIADVLLLMEKENVKPSLFTYRILIDSKGHSNDI 319
Query: 224 SSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYN 283
+ ME V + M+ + D + +A +Y AGLKEKA LK+ E + K +
Sbjct: 320 AGMEQVFETMKEEG-FEPDIQLQALLARHYTSAGLKEKAEAILKEIEGENLEEKQWVCAT 378
Query: 284 HLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLE----E 339
L+ YA+LG DE+ + W K+ K D + + + K+ ++EEAE + E +
Sbjct: 379 -LLRLYANLGKADEVERIW---KVCESKPRVDDCLAAVEAWGKLEKIEEAEAVFEMASKK 434
Query: 340 WELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNN 399
W+L+ Y +I+L Y+ M+ K ++K + G P +W+ + Y
Sbjct: 435 WKLNSKNY-----SILLKIYANNKMLAKGKDLIKRMADSGLRIGPLTWNALVKLYIQAGE 489
Query: 400 MEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK----VQ 455
+EKA +++A+ + +P + IL+ DV E LK++
Sbjct: 490 VEKADSVLQKAIQQSQ----LQPMFTTYLDILEQYAKRGDVHNSEKIF--LKMRQAGYTS 543
Query: 456 KRNMYHALTEAHIRSGQEVDGLLESMKADDIDEDK 490
+ + + L +A++ + G+ E MKAD++ +K
Sbjct: 544 RISQFKVLMQAYVNAKVPAYGIRERMKADNLFPNK 578
>gi|356498381|ref|XP_003518031.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Glycine max]
Length = 609
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 130/452 (28%), Positives = 231/452 (51%), Gaps = 28/452 (6%)
Query: 49 PDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWM-SGQGLAFSVHDH 107
P +S+ L++WV G+++S E+ +R+LR RK + A Q+ +W+ S + L F D+
Sbjct: 154 PGLSVDSALNKWVEHGKELSRKEILLAVRELRRRKMYGRAFQLFQWLESNKKLEFMESDY 213
Query: 108 AVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALL-NCYVREGLVDESLSLMQKMKEM 166
A QLDLI K+RGL AE Y S+ + + + LY LL NC + L+ + + KMK++
Sbjct: 214 ASQLDLIAKLRGLPKAEKYIESVPESFRGELLYRTLLANCASQNNLI-ATEKIFNKMKDL 272
Query: 167 GSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSM 226
+A N ++ LY +KI DVLL M++ V P F+YRI I+S G ++++ M
Sbjct: 273 DLPLTAFACNQLLLLYKKL-DKKKIADVLLLMEKENVKPSLFTYRILIDSKGQSNDIAGM 331
Query: 227 ENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLI 286
E V + M+ + D + +A +Y +GLKEKA LK+ E K + L+
Sbjct: 332 EQVFETMKEEG-FEPDIQIQALLARHYTSSGLKEKAEAMLKEMEGENLKENQWVCAT-LL 389
Query: 287 SHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLE----EWEL 342
YA+LG DE+ + W + + K + + D + + + K+ ++EEAE + E +W+L
Sbjct: 390 RLYANLGKADEVERIWKVCESKPRVE---DCLAAVEAWGKLNKIEEAEAVFEMVSKKWKL 446
Query: 343 SCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEK 402
+ Y +++L Y+ M+ K ++K + G P +W + Y +EK
Sbjct: 447 NSKNY-----SVLLKIYANNKMLTKGKELVKLMADSGVRIGPLTWDALVKLYIQAGEVEK 501
Query: 403 AFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK----VQKRN 458
A + +A+ ++N+ +P + +IL+ DV E LK++ + +
Sbjct: 502 ADSILHKAI---QQNQL-QPMFTTYLAILEQYAKRGDVHNSEKIF--LKMRQAGYTSRIS 555
Query: 459 MYHALTEAHIRSGQEVDGLLESMKADDIDEDK 490
+ L +A++ + G+ E +KAD++ +K
Sbjct: 556 QFQVLIQAYVNAKVPAYGIRERIKADNLFPNK 587
>gi|9955532|emb|CAC05471.1| putative protein [Arabidopsis thaliana]
Length = 402
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 183/334 (54%), Gaps = 24/334 (7%)
Query: 24 FTRAYRAVKPVA---------RNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQR 74
F+++Y A + +++L SRI L P S T VL++W+ EG +++ EL+
Sbjct: 33 FSKSYNADAAIGNSLVEESEEKDDLKSRIFRLRLPKRSATTVLEKWIGEGNQMTINELRE 92
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+ ++LR +R+KHAL+ E S D+A ++DLI KV G+++AE YF L+ +
Sbjct: 93 ISKELRRTRRYKHALEHEE------SKISDADYASRIDLISKVFGIDAAERYFEGLDIDS 146
Query: 135 KVDKLYGALLNCYVREGLVDESLSLMQKMKEMGS--FGSALNYNGIMCLYTNTGQHEKIP 192
K + Y +LL+ Y + + +L +++ E S FG A+ YN +M LY + GQ EK+P
Sbjct: 147 KTAETYTSLLHAYAASKQTERAEALFKRIIESDSLTFG-AITYNEMMTLYMSVGQVEKVP 205
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
+V+ +K+ V PD F+Y + ++S A + + +L+EM + + W Y + +
Sbjct: 206 EVIEVLKQKKVSPDIFTYNLWLSSCAATFNIDELRKILEEMRHDASSNEGWVRYIDLTSI 265
Query: 253 YIIAGLKEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKK 311
YI + A L + E +S+ ++ + Y+ L+ + LGNK + + W + ++
Sbjct: 266 YINSSRVTNAESTLPVEAEKSISQ-REWITYDFLMILHTGLGNKVMIDQIW--KSLRNTN 322
Query: 312 QL--NRDYITMLGSLVKIGELEEAEKMLEEWELS 343
Q+ +R YI +L S + +G L EAE+++ +W+ S
Sbjct: 323 QILSSRSYICVLSSYLMLGHLREAEEIIHQWKES 356
>gi|125575301|gb|EAZ16585.1| hypothetical protein OsJ_32057 [Oryza sativa Japonica Group]
Length = 400
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 119/461 (25%), Positives = 213/461 (46%), Gaps = 92/461 (19%)
Query: 40 YSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQ- 98
Y + +G + S L E + +++ E+Q +I+ L R+RF ALQ+S WM+ +
Sbjct: 11 YKDLKSMGSSNNSFNGAL----AEERHVAKPEVQSIIKYLCRRRRFSQALQLSMWMTERL 66
Query: 99 GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLS 158
L S D A +L+LI KV GL+ A YF+S+ D+ K + YG+LL CY V+++
Sbjct: 67 HLHLSPGDVANRLELITKVYGLDRAVEYFDSMPDQLKQQQCYGSLLKCYAEANCVEKAEE 126
Query: 159 LMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYG 218
L +KM+ MG S ++Y + + Y
Sbjct: 127 LFEKMRGMGMASS------------------------------------YAYNVMMRLYL 150
Query: 219 ARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY--------LKKCE 270
++ + ++ Q ME +S I D T T ++A L++K + +K E
Sbjct: 151 QNGQVERVHSMHQAME-ESGIVPDVSTTHT-----LVAVLRKKKTLVAAYVVAEDIKAIE 204
Query: 271 DIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGEL 330
+++ K+ N Y+ +G L+K+ ++
Sbjct: 205 NVLEKANSC----------------------------------NSMYMCRIGVLLKMNDM 230
Query: 331 EEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSII 390
AEK EEWE +D R+ N+++ Y ++G+++KA+A++ + +KKG+ P N+ +
Sbjct: 231 VGAEKAYEEWESKHVYHDSRLINLLVDAYCKEGLMDKAEALVDQFIKKGRMPFANTCYKL 290
Query: 391 AAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL 450
A GY + KA + K+ALA + W P + V L++ + ++VE E +S L
Sbjct: 291 AGGYFKVGQVSKAADLTKKALA--SASNEWIPDLTNVLMSLNYFAEQKNVEAAEEMMSLL 348
Query: 451 -KIKVQKRNMYHALTEAHIRSGQEVDGLLESMKADDIDEDK 490
++ R++YH L + ++ +G+ V LL MK D ++ D+
Sbjct: 349 QRLVTPTRDIYHGLLKTYVNAGKPVSDLLHRMKKDGMEADE 389
>gi|356503391|ref|XP_003520493.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g80270, mitochondrial-like [Glycine max]
Length = 580
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 126/440 (28%), Positives = 208/440 (47%), Gaps = 25/440 (5%)
Query: 51 VSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWM-SGQGLAFSVHDHAV 109
SL VL++W+ EG +++ + R RK F AL +SEW+ S + F D+A
Sbjct: 136 TSLHLVLEKWLEEGNELT---------RXRKRKLFGRALLLSEWLESKKEFEFIERDYAS 186
Query: 110 QLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSF 169
+LDLI K+RGL AE Y ++ + + +Y LL V + V ++ + KMK++
Sbjct: 187 RLDLIAKLRGLHKAEVYIETIPESCSREIMYRTLLANCVSQNNVKKAEEVFSKMKDLDLP 246
Query: 170 GSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENV 229
+ N ++ LY + +KI D+LL M+ + P SY I I++ G ++ M+ +
Sbjct: 247 ITVFTCNELLFLYKRNDK-KKIADLLLLMENEKIKPSRHSYSILIDTKGQSKDIGGMDQI 305
Query: 230 LQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHY 289
+ M++Q I D T + +A +YI AGL++K LK+ E K L L+ Y
Sbjct: 306 VDRMKAQG-IEPDINTQAVLARHYISAGLQDKVETLLKQMEGENLKQNRWLC-RILLPLY 363
Query: 290 ASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEA-EKMLEEWELSCYCYD 348
A+LG DE+ + W + + + I G L KI E E+ E M+++W+LS
Sbjct: 364 ANLGKVDEVGRIWKVCETNPRYDECLGAIEAWGKLNKIDEAEKVFEMMVKKWKLSS---- 419
Query: 349 FRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMK 408
+ +I+L Y+ M+ K ++K I G P +W I Y +EKA ++
Sbjct: 420 -KTCSILLKVYANNEMLMKGKDLMKRIGDGGCRIGPLTWDTIVKLYVQTGEVEKADSVLQ 478
Query: 409 EALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK--VQKRNMYHALTEA 466
+A + +P S +IL+ D+ E +K K MY L A
Sbjct: 479 KA----AQQSQMKPMFSTYLTILEQYAKRGDIHNSEKIFLRMKQADYTSKAKMYQVLMNA 534
Query: 467 HIRSGQEVDGLLESMKADDI 486
+I + G+ + +KAD I
Sbjct: 535 YINAKVPAYGIRDRLKADSI 554
>gi|449506017|ref|XP_004162629.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 608
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 215/444 (48%), Gaps = 15/444 (3%)
Query: 51 VSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQG-LAFSVHDHAV 109
+S+ LD+WV EG+ +S E+ + LR R+ F ALQ SEW+ G L F+ D+A
Sbjct: 154 LSVPSALDKWVSEGKDLSRAEISLAMLHLRKRRMFGKALQFSEWLEANGQLEFNQRDYAS 213
Query: 110 QLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSF 169
+LDLI KV+GL AE+Y + + + ++ LL YV V ++ + KMK++
Sbjct: 214 RLDLIAKVQGLPKAESYIAKIPQSFQGEVIHRTLLANYVAANNVKKAEEVFNKMKDLEFP 273
Query: 170 GSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENV 229
+ ++ ++ LY + K+ D+L M++ V P F+Y+I I++ G +++S ME V
Sbjct: 274 MTPFAHDQMLILYKRIDKR-KLADILSLMEKENVKPSPFTYKILIDAKGLCNDISGMEQV 332
Query: 230 LQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHY 289
+ M+++ I D T S +A +Y+ GLK+KA + LK E+ SK L L+ Y
Sbjct: 333 VDSMKAEG-IKPDVSTLSLLAKHYVSNGLKDKAKVILKDMEENNSKG-SRLPCRILLPLY 390
Query: 290 ASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDF 349
+L +DE+ + W + + + + I G K+ ++EAEK+ + + +
Sbjct: 391 GALQMEDEVRRLWKICEANPHMEESMAAIVAWG---KLKNVQEAEKIFDRFVKTWKKPST 447
Query: 350 RVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
R N ++ Y M+ K ++ ++ + G +W + Y + +EKA +
Sbjct: 448 RHYNTMMNVYGGSKMLTKGKELVNQMAESGCRMDELTWDAVVKLYVEAGEVEKA-----D 502
Query: 410 ALAVHEENKF-WRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK--VQKRNMYHALTEA 466
+ V K+ +P + +++D DV E + V + + L +A
Sbjct: 503 SFLVKAVQKYGMKPLFTSYKTLMDHYARRGDVHNAEKIFDKMIQSGFVPRLGQFGTLLQA 562
Query: 467 HIRSGQEVDGLLESMKADDIDEDK 490
++ S G+ + M A +I +K
Sbjct: 563 YVNSKTPAYGMKDRMMAYNIYPNK 586
>gi|414877074|tpg|DAA54205.1| TPA: hypothetical protein ZEAMMB73_351899 [Zea mays]
Length = 613
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 126/446 (28%), Positives = 221/446 (49%), Gaps = 23/446 (5%)
Query: 49 PDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWM-SGQGLAFSVHDH 107
P +T L++W +G + EL V+ LR RK + AL++ E++ + Q L D+
Sbjct: 156 PRHQVTSALEKWAKDGNALDRGELYYVLLNLRKRKWYHKALELVEYVQNSQLLELGERDY 215
Query: 108 AVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMG 167
A ++DL KV GL AE Y + + + +Y LL V EG V +S + +MK++G
Sbjct: 216 AARVDLTAKVYGLHKAEQYIEKIPASHRSEVVYRTLLANCVAEGNVKKSEQVFNRMKDLG 275
Query: 168 SFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSME 227
+ + N ++ LY + +KI DVL M++ V P F+Y++ +++ G ++ +ME
Sbjct: 276 FPVTTFSSNQLLLLYKRLDK-KKIADVLTMMEKEDVKPSIFTYKVLVDAKGMVGDVEAME 334
Query: 228 NVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCE-DIVSKSKDALGYNHLI 286
V++ M + I D +T+A YI G ++KA L+ E D + K++ A + L+
Sbjct: 335 KVVESM-VKDGIEPDLTFNATIARQYIFNGQRDKAETLLESMEGDDIQKNRAACKF--LL 391
Query: 287 SHYASLGNKDEMMKFWGLQKIKCKKQLNRD-YITMLGSLVKIGELEEAEKMLEEWELSCY 345
YA LGN D + + W + C+ D ++ + + K+G +E+AEK+ E+ +
Sbjct: 392 PLYAFLGNGDAVERIWKV----CEDNTRIDECLSAIDAFGKLGNVEKAEKVFEDMFVKWK 447
Query: 346 CYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGK---TPTPNSWSIIAAGYADKNNMEK 402
+ +L Y+ + +++K + + K + ++G TPT N+ + YAD +EK
Sbjct: 448 NLSSKYYTALLKVYANQNLLDKGEELAKRMDEEGAKFGTPTLNA---LVKLYADAGEVEK 504
Query: 403 AFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK-IKVQKR-NMY 460
A E + L++ K P S ++LD DV E + L+ I R MY
Sbjct: 505 A-ESLLHKLSLKNNVK---PSYSSYMTLLDSYSKKGDVHNSEKVFNKLRQIGYTGRIRMY 560
Query: 461 HALTEAHIRSGQEVDGLLESMKADDI 486
L +++ + G E MKAD+I
Sbjct: 561 QFLLHSYLHAKAPAYGFKERMKADNI 586
>gi|297829684|ref|XP_002882724.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328564|gb|EFH58983.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 518
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 119/484 (24%), Positives = 225/484 (46%), Gaps = 76/484 (15%)
Query: 33 PVARNNLYSRISPLGDPDVSLTPVLDQWVLE----GQKISELELQRVIRQLRSRKRFKHA 88
P L SRI D ++T VL++W + +++ ++ ++ +L KR++ A
Sbjct: 35 PGTNQTLLSRIESAADQKAAITTVLEEWRQQQKHGNHQLNPSLVKGIVEKLHDSKRYRQA 94
Query: 89 LQVSEWMSGQGLAFSV-HDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCY 147
L+VS WM + + + D AV+ LI V GLE AE +F S+ + K + +Y +LL Y
Sbjct: 95 LEVSNWMIEKKICNHLPEDLAVRFHLIENVLGLEEAEKFFQSIPENLKGESIYTSLLKSY 154
Query: 148 VREGLVD--ESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
+ G + ++ +KM+++G YN ++ LY++ K+ ++L +MKEN +
Sbjct: 155 AKSGEISLRKAEYTFEKMRKLGMLLRPSPYNSMVSLYSSLRNRNKVDEILREMKENNLEL 214
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
D+ + + Y A ++++M+ L + + + +++W T +A Y
Sbjct: 215 DSPTVNNALRVYAAVCDVATMDKFLADWNAIT--TLEWLTTLEMAKAY------------ 260
Query: 266 LKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLV 325
LI Y G ++++ + W L K K++ N + ++GSL+
Sbjct: 261 ------------------RLIRLYGEAGEREDVYRIWDLYK-NTKEKDNEGFRALIGSLL 301
Query: 326 KIGELEEAEKM-LEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVL------------ 372
K+ ++ AEK+ +EWE S +D R+P +++ GY KGM++KAD +L
Sbjct: 302 KLDDINGAEKIYYDEWESSGLEFDLRIPTMLMSGYRAKGMVKKADKLLYKTMKNKRLVIS 361
Query: 373 -----KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE-----CMKEALAVHEENKFWRP 422
+E+VK P+ + D N + KA E C K + E+ +
Sbjct: 362 INPFVEELVKNRNQVKPSDLRDLIKNLRDSNQLSKALEASTWMCEKRGFNLFPED--YAI 419
Query: 423 KPSLVSSILDWLGDNRDVEEVEAFV-SSLKIKVQKRNMYHALTEAHIRSGQ---EVDGLL 478
+ L+ +L +EE E F SS+ ++ ++Y L ++ RS + + +G+
Sbjct: 420 RFHLIEKVL-------GLEEAEKFFESSIPKNMKDYSVYDTLLTSYTRSDKTLVKAEGVF 472
Query: 479 ESMK 482
E M+
Sbjct: 473 EKMR 476
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 82/156 (52%), Gaps = 3/156 (1%)
Query: 51 VSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWM-SGQGLAFSVHDHAV 109
+S+ P +++ V ++ +L+ +I+ LR + AL+ S WM +G D+A+
Sbjct: 360 ISINPFVEELVKNRNQVKPSDLRDLIKNLRDSNQLSKALEASTWMCEKRGFNLFPEDYAI 419
Query: 110 QLDLIGKVRGLESAETYFNSLNDEDKVD-KLYGALLNCYVR-EGLVDESLSLMQKMKEMG 167
+ LI KV GLE AE +F S ++ D +Y LL Y R + + ++ + +KM+E+G
Sbjct: 420 RFHLIEKVLGLEEAEKFFESSIPKNMKDYSVYDTLLTSYTRSDKTLVKAEGVFEKMRELG 479
Query: 168 SFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
+N I+ LY + K+ +L DMK+N +
Sbjct: 480 FLSKLSPFNSIISLYIEQRKLSKVNKLLCDMKQNNI 515
>gi|357509403|ref|XP_003624990.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500005|gb|AES81208.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 623
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 125/471 (26%), Positives = 229/471 (48%), Gaps = 28/471 (5%)
Query: 29 RAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHA 88
R+ + A + L+ I P ++ L++WV +G+++S E+ + LR RK + A
Sbjct: 150 RSSRKRADSELFKAIMNGTGP--TIYTALEKWVEDGKELSREEISLTMINLRRRKIYLKA 207
Query: 89 LQVSEWM-SGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCY 147
LQ+SEW+ S + L F D+A QLDLI K+ GL AE Y + + + + +Y LL
Sbjct: 208 LQLSEWLESKKHLEFVERDYASQLDLIAKLHGLHKAEVYIEKIPESFRGEIIYRTLLANC 267
Query: 148 VREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDN 207
V + + ++ + KMK++ + N ++ LY T + +KI DVLL M++ V P
Sbjct: 268 VTQNNLKKAEEIFNKMKDLEFPLTPFACNQLLLLYKRTDK-KKIADVLLLMEQENVKPSP 326
Query: 208 FSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLK 267
+++I I+ G +++ M+ ++ +M ++ I D T + + +YI G +KA + LK
Sbjct: 327 LTFKILIDVKGQSNDIDGMDQIVDQMRAEG-IEPDNYTKAVLVGHYISGGHDDKAKMLLK 385
Query: 268 KCEDIVSKSKDALGYNH-----LISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLG 322
+ E + L N L++ YA LG DE+ + W + + + + I G
Sbjct: 386 EMEG------ENLKENRWVCRLLLALYAKLGMADEVGRVWKVCETRPSVEDCVAAIEAWG 439
Query: 323 SLVKIGELEEA-EKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKT 381
L KI E E E M +W+L+ + +++L Y+ M+ K ++K + KG
Sbjct: 440 KLKKIDEAEAVFEVMARKWKLTS-----KNCSVLLNVYANNKMLTKGKDLIKRMAHKGCR 494
Query: 382 PTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVE 441
P +W+ + Y +EKA +++A+ + RP S +++L+ D+
Sbjct: 495 IGPLTWNALVKLYVQAGEVEKADSVLQKAI----QQSPVRPIFSSYNTLLEEYSKRGDIH 550
Query: 442 EVEAFVSSLKIK--VQKRNMYHALTEAHIRSGQEVDGLLESMKADDIDEDK 490
E +K + + Y L EA+ R+ G+ + +KAD++ +K
Sbjct: 551 NSEKIFYRMKQAGYISRLKQYQILIEAYRRANVPAYGIRDRLKADNVFPNK 601
>gi|414586983|tpg|DAA37554.1| TPA: hypothetical protein ZEAMMB73_139718 [Zea mays]
Length = 423
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 177/345 (51%), Gaps = 14/345 (4%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
++L SRI LG S T L++W EG+ EL+R+ R L +R+KHAL+V++WM
Sbjct: 54 DDLRSRIFRLGLAKRSATAALEKWSSEGRDAPTAELRRIARDLTRVRRYKHALEVADWMK 113
Query: 97 GQGLA-FSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDE 155
+ S +D+ +++DLI KV G +AE +F L K + Y ALL+ Y R + D
Sbjct: 114 THHESDLSENDYGMRIDLITKVFGASAAEDFFEKLPPGAKSLEAYTALLHSYGRSKMTDR 173
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
+ L ++MK+ AL YN +M LY + G+ K+ V ++K V PD F+Y + +
Sbjct: 174 AERLFERMKDASLPMDALVYNEMMTLYISVGELGKVEAVAEELKRQNVSPDLFTYNLRAS 233
Query: 216 SYGARSELSSMENVLQEM--ESQSHISMDWGTYSTVANYYIIAG--LKEKAIIYLKKCED 271
+ A +L VL EM + +S W Y +A+ Y+ AG L ++ E
Sbjct: 234 AAAASMDLEGFRAVLDEMSRDPKSSTEGGWALYRDLASVYVDAGQLLGSVNSPPVEAGEA 293
Query: 272 IVSKSKDALGYNHLISHYASLGNKDEMMKFW-------GLQKIKCKKQLNRDYITMLGSL 324
+S+ ++ + Y+ L+ +A LG + + W Q + ++ +R+Y+ ++ S
Sbjct: 294 RISQ-REWITYDFLVILHAGLGRPERIRDIWRSMVATSQSQSQQQQRMTSRNYVCVVSSY 352
Query: 325 VKIGELEEAEKMLEEWELS-CYCYDFRVPNIILLGYSQKGMIEKA 368
+ G LE+A +++++W+ S +D N +L + G+ + A
Sbjct: 353 LACGRLEDAGEVVDQWQRSKAPEFDVSACNRLLDALLRAGLADAA 397
>gi|307136024|gb|ADN33878.1| DNA-binding protein [Cucumis melo subsp. melo]
Length = 470
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 178/339 (52%), Gaps = 12/339 (3%)
Query: 49 PDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHA 108
P +S+ LD+WV EG+++S ++ + LR R+ F AL+ SEW+ G + D+A
Sbjct: 141 PGLSVPSALDKWVSEGKELSRADISLTMLYLRRRRMFGKALKFSEWLEANGKLVTDRDYA 200
Query: 109 VQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGS 168
QLDLIGK+RGL AE Y + + + + +Y LL V V ++ + KMK++
Sbjct: 201 SQLDLIGKLRGLRMAENYISKIPKSFQGEVVYRTLLANCVMSTNVRKAEEVFNKMKDLEF 260
Query: 169 FGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMEN 228
+A N ++ LY T + +KI DVLL M++ V P F+Y+I I++ G +++S ME
Sbjct: 261 PITAFACNQLLLLYKRTDK-KKIADVLLLMEKENVKPSPFTYKILIDAKGLSNDISGMEQ 319
Query: 229 VLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISH 288
V+ M+++ I + GT +A +Y+ AGLK+KA LK+ E+I SK L+
Sbjct: 320 VVDTMKAEG-IKLGVGTLLLLAKHYVSAGLKDKAKATLKETEEINSKGSRR-PCRFLLPL 377
Query: 289 YASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGEL---EEAEKMLEEWELSCY 345
Y L +DE+ + W + C+ N + ++V G+L +EAEK+ + +
Sbjct: 378 YGELQMEDEVRRLWEI----CES--NPHVEECMAAIVAWGKLKNVQEAEKIFDRVVKTGK 431
Query: 346 CYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTP 384
R + ++ Y M+ K ++ ++ + G + P
Sbjct: 432 KLSTRHYSTMMNVYRDSKMLTKGKELVNQMAESGCSMDP 470
>gi|225441211|ref|XP_002266581.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Vitis vinifera]
Length = 587
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 114/441 (25%), Positives = 216/441 (48%), Gaps = 15/441 (3%)
Query: 50 DVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS-GQGLAFSVHDHA 108
D + VL++W EG+ +S E+ + + LR + F ALQ SEWM + L D+A
Sbjct: 132 DQPIHSVLNKWDQEGKDMSRAEIAQTMLNLRKIRMFLKALQFSEWMEEHKKLDMVERDYA 191
Query: 109 VQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGS 168
++DLI KVRGL+ AE Y + + + +Y LL V ++ + KMK++G
Sbjct: 192 SRVDLIAKVRGLQKAEHYIEKIPKSFRGELVYRTLLANCVSTTNAKKAEEVFNKMKDLGF 251
Query: 169 FGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMEN 228
+ N ++ LY + +KI DVLL M++ V P F+Y + I++ G ++++ ME
Sbjct: 252 PITTFACNQLLLLYKRVDK-KKIADVLLLMEKEDVKPSLFTYGLLIDTKGQSNDITGMEQ 310
Query: 229 VLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISH 288
+++ M+++ I + S + +Y+ GLKEKA LK+ E K ++ L+
Sbjct: 311 IVETMKAEG-IEPNLQVQSILVRHYVFGGLKEKAEAILKEMEGGNLK-ENRWVCRVLLPP 368
Query: 289 YASLGNKDEMMKFWGLQKIKCKKQLN-RDYITMLGSLVKIGELEEAEKMLEEWELSCYCY 347
YA+LG D++ + W + C+ +++ + + K+ ++EEAE + + +
Sbjct: 369 YAALGKADDVERIWKV----CESNPRLPEFVAAIEAYGKLKKVEEAEAIFNKMSKTFKRL 424
Query: 348 DFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECM 407
+ + +L Y+ M+ K ++K++ G P +W + Y + +EKA + +
Sbjct: 425 SSKHYSALLKVYADHKMLIKGKDLVKQMSDSGCRIGPLTWDALVKLYVEAGEVEKADKIL 484
Query: 408 KEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK--VQKRNMYHALTE 465
++A+ + +P S +I+D D+ E ++ V + + L +
Sbjct: 485 QKAM----QQSPIKPMFSTYMAIMDQYAKRGDIHNSEKMFHQMRQSGYVSRLRQFQCLIQ 540
Query: 466 AHIRSGQEVDGLLESMKADDI 486
A++ + G+ E MKAD+I
Sbjct: 541 AYVNAKAPAYGIKERMKADNI 561
>gi|297739953|emb|CBI30135.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 114/441 (25%), Positives = 215/441 (48%), Gaps = 15/441 (3%)
Query: 50 DVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS-GQGLAFSVHDHA 108
D + VL++W EG+ +S E+ + + LR + F ALQ SEWM + L D+A
Sbjct: 169 DQPIHSVLNKWDQEGKDMSRAEIAQTMLNLRKIRMFLKALQFSEWMEEHKKLDMVERDYA 228
Query: 109 VQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGS 168
++DLI KVRGL+ AE Y + + + +Y LL V ++ + KMK++G
Sbjct: 229 SRVDLIAKVRGLQKAEHYIEKIPKSFRGELVYRTLLANCVSTTNAKKAEEVFNKMKDLGF 288
Query: 169 FGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMEN 228
+ N ++ LY + +KI DVLL M++ V P F+Y + I++ G ++++ ME
Sbjct: 289 PITTFACNQLLLLYKRVDK-KKIADVLLLMEKEDVKPSLFTYGLLIDTKGQSNDITGMEQ 347
Query: 229 VLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISH 288
+++ M+++ I + S + +Y+ GLKEKA LK+ E K + L+
Sbjct: 348 IVETMKAEG-IEPNLQVQSILVRHYVFGGLKEKAEAILKEMEGGNLKENRWVC-RVLLPP 405
Query: 289 YASLGNKDEMMKFWGLQKIKCKKQLN-RDYITMLGSLVKIGELEEAEKMLEEWELSCYCY 347
YA+LG D++ + W + C+ +++ + + K+ ++EEAE + + +
Sbjct: 406 YAALGKADDVERIWKV----CESNPRLPEFVAAIEAYGKLKKVEEAEAIFNKMSKTFKRL 461
Query: 348 DFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECM 407
+ + +L Y+ M+ K ++K++ G P +W + Y + +EKA + +
Sbjct: 462 SSKHYSALLKVYADHKMLIKGKDLVKQMSDSGCRIGPLTWDALVKLYVEAGEVEKADKIL 521
Query: 408 KEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK--VQKRNMYHALTE 465
++A+ + +P S +I+D D+ E ++ V + + L +
Sbjct: 522 QKAM----QQSPIKPMFSTYMAIMDQYAKRGDIHNSEKMFHQMRQSGYVSRLRQFQCLIQ 577
Query: 466 AHIRSGQEVDGLLESMKADDI 486
A++ + G+ E MKAD+I
Sbjct: 578 AYVNAKAPAYGIKERMKADNI 598
>gi|449437712|ref|XP_004136635.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 123/450 (27%), Positives = 220/450 (48%), Gaps = 22/450 (4%)
Query: 49 PDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQG-LAFSVHDH 107
P ++++ LD+WV EG+++S ++ + LR + + ALQ SEW+ G L F D+
Sbjct: 148 PGLTVSSALDKWVSEGKELSRDDISSAMLNLRKCRMYGKALQFSEWLEANGKLDFVEKDY 207
Query: 108 AVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALL-NCYVREGLVDESLSLMQKMKEM 166
A +LDLIGK+RGL AE Y + + + +Y LL NC + V ++ + KMK +
Sbjct: 208 ASRLDLIGKLRGLRMAENYIAKIPKSFQGEVVYQTLLVNCVIASN-VHKAEKVFNKMKNL 266
Query: 167 GSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSM 226
+A N ++ LY T + KI DVLL MK+ V +YRI I+ G ++++ M
Sbjct: 267 EFPITAFACNQLLLLYKRTDKR-KIADVLLLMKKENVKYSTSTYRILIDVNGLSNDITGM 325
Query: 227 ENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLI 286
E V+ M+++ I +D T S + +Y+ GLK+KA LK+ E+I S+ L+
Sbjct: 326 EEVVDSMKAEG-IKLDVETLSRLVKHYVSGGLKDKAKAILKEMEEINSEG-SRWPCRILL 383
Query: 287 SHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGEL---EEAEKMLEEWELS 343
Y L +DE+ + W + C N + ++V G+L +EAEK+ + +
Sbjct: 384 PLYGELQMEDEVRRLWEI----CGS--NPHIEECMAAIVAWGKLKNIQEAEKIFDRVVKT 437
Query: 344 CYCYDFRVPNIILLGYSQKG-MIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEK 402
R + +L Y + M+ K V+K++ + G P + + Y + +EK
Sbjct: 438 GEKLSARHYSTMLNVYREDSKMLTKGKEVVKQMAESGSRMDPVTLDAVVKLYVEAGEVEK 497
Query: 403 AFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKI--KVQKRNMY 460
A + + + +++ +P + +++D DV E ++ V + + +
Sbjct: 498 ADSFLVKTVLQYKK----KPMFTTYITLMDRYASRGDVPNAEKIFGMMRKYGYVGRLSQF 553
Query: 461 HALTEAHIRSGQEVDGLLESMKADDIDEDK 490
L +A++ + G+ E MKAD + +K
Sbjct: 554 QTLIQAYVNAKAPAYGMRERMKADSVFPNK 583
>gi|413946863|gb|AFW79512.1| DNA-binding protein [Zea mays]
Length = 622
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 123/447 (27%), Positives = 214/447 (47%), Gaps = 25/447 (5%)
Query: 49 PDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS-GQGLAFSVHDH 107
P +T L++W +G EL V+ LR R + AL++ EW+ Q F D+
Sbjct: 165 PRHQVTSALEKWAKDGNAFDRGELYYVLLNLRKRHWYSKALELVEWVQKSQLFEFVERDY 224
Query: 108 AVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMG 167
A LDL KV GL AE + + + +Y LL V + +S + +MK++G
Sbjct: 225 AAHLDLTAKVYGLHKAEQTIEKIPASCRGEIVYRTLLANCVSASNIKKSEQVFNRMKDLG 284
Query: 168 SFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSME 227
+ ++N ++ LY + +KI DVL M++ V P F+Y+I +++ G+ ++ +ME
Sbjct: 285 FPVTQFSFNQLLLLYKRLDR-KKIADVLAMMEKEDVKPSLFTYKILVDAKGSVGDIEAME 343
Query: 228 NVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCE-DIVSKSKDALGYNHLI 286
V++ ME S I D +T+A +YI G +EKA LK E D + K++ A L+
Sbjct: 344 KVIESMEKDS-IEPDLTFNATIARHYIFYGQREKAEALLKAMEGDDIQKNRAAC--KTLL 400
Query: 287 SHYASLGNKDEMMKFWGLQKIKCKKQLN-RDYITMLGSLVKIGELEEAEKMLEEWELSCY 345
+A LGN D + + W C+ + ++ + + K+G++E+AEK+ E+ +
Sbjct: 401 PLHAFLGNSDAVERIWK----ACEDNTRVAESVSAIEAFGKLGDVEKAEKVFEDMLVHWK 456
Query: 346 CYDFRVPNIILLGYSQKGMIEKADAVLKEI----VKKGKTPTPNSWSIIAAGYADKNNME 401
+ N +L Y+ +++K + K + V+ G PT ++ + Y + +E
Sbjct: 457 TLSSKFYNALLKVYADHNLLDKGKELAKRMDENRVRFG-APTLDA---LVKLYVEAGEVE 512
Query: 402 KAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK--VQKRNM 459
KA E + L++ K P + ++LD DV E + L+ + M
Sbjct: 513 KA-ESLVHKLSIQNHIK---PIYNTYMTLLDSYSKKGDVRNSEKVFNKLRQSGYTGRIRM 568
Query: 460 YHALTEAHIRSGQEVDGLLESMKADDI 486
Y L A++R+ G E MKAD+I
Sbjct: 569 YQVLLHAYVRAKAPAYGFRERMKADNI 595
>gi|125525413|gb|EAY73527.1| hypothetical protein OsI_01409 [Oryza sativa Indica Group]
Length = 611
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/445 (26%), Positives = 215/445 (48%), Gaps = 15/445 (3%)
Query: 46 LGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGL-AFSV 104
L P V + +W+ +G + EL V+ LR RK + ALQ+ E++ L
Sbjct: 151 LVSPRVDVAGATKKWLNDGNTLERSELFYVLLSLRKRKLYTKALQLLEYVEESKLFDLGE 210
Query: 105 HDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMK 164
D+A ++DL+ KV G+ AE Y ++ + + +Y LL V V ++ + KMK
Sbjct: 211 RDYASRVDLVAKVHGIYKAEKYIENVPASHRGEVVYRTLLANCVAIANVKKTEQVFNKMK 270
Query: 165 EMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELS 224
++G + + N ++ LY + +K+ DVL M++ V P F+Y++ +++ GA ++
Sbjct: 271 DLGFPVTVFSCNQLLLLYKRVDK-KKLGDVLTMMEKENVKPSLFTYKLLVDTKGATRDIE 329
Query: 225 SMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCE-DIVSKSKDALGYN 283
ME V+Q M++ I D +T+A +YI G +EKA L++ E D +++++ A +
Sbjct: 330 DMEKVIQAMQADG-IEPDLLIQATIARHYIFGGYREKAEAILEQIEGDDINENRSACKF- 387
Query: 284 HLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELS 343
++ YA LG K ++ + W + ++ + I G K+G++E+AE++ E +
Sbjct: 388 -VLPLYAFLGKKADVERIWKVCEVNARLDECMSAIEAFG---KLGDVEKAEEIFENMFKT 443
Query: 344 CYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
F N +L Y+ K + +K + K + G P++ + Y+D +EKA
Sbjct: 444 WKTLSFEYYNAMLKVYANKKLFDKGKELAKRMGDDGCRLGPSTLDSLVKLYSDAGEVEKA 503
Query: 404 FECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK--VQKRNMYH 461
+ + + +NK +P + +LD DV E S ++ + Y
Sbjct: 504 DSILHK---LSYKNKI-KPLYTTYLMLLDSYSKKGDVHNAEKLFSKVRQMGYTGRIRQYQ 559
Query: 462 ALTEAHIRSGQEVDGLLESMKADDI 486
L EA++ + G E MKADDI
Sbjct: 560 LLLEAYLNAKTPPYGFKERMKADDI 584
>gi|56783681|dbj|BAD81093.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|56784204|dbj|BAD81589.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|125569936|gb|EAZ11451.1| hypothetical protein OsJ_01319 [Oryza sativa Japonica Group]
Length = 611
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/445 (26%), Positives = 215/445 (48%), Gaps = 15/445 (3%)
Query: 46 LGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGL-AFSV 104
L P V + +W+ +G + EL V+ LR RK + ALQ+ E++ L
Sbjct: 151 LVSPRVDVAGATKKWLNDGNTLERSELFYVLLSLRKRKLYTKALQLLEYVEESKLFDLGE 210
Query: 105 HDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMK 164
D+A ++DL+ KV G+ AE Y ++ + + +Y LL V V ++ + KMK
Sbjct: 211 RDYASRVDLVAKVHGIYKAEKYIENVPASHRGEVVYRTLLANCVAIANVKKTEQVFNKMK 270
Query: 165 EMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELS 224
++G + + N ++ LY + +K+ DVL M++ V P F+Y++ +++ GA ++
Sbjct: 271 DLGFPVTVFSCNQLLLLYKRVDK-KKLGDVLTMMEKENVKPSLFTYKLLVDTKGAARDIE 329
Query: 225 SMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCE-DIVSKSKDALGYN 283
ME V+Q M++ I D +T+A +YI G +EKA L++ E D +++++ A +
Sbjct: 330 DMEKVIQAMQADG-IEPDLLIQATIARHYIFGGYREKAEAILEQIEGDDINENRSACKF- 387
Query: 284 HLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELS 343
++ YA LG K ++ + W + ++ + I G K+G++E+AE++ E +
Sbjct: 388 -VLPLYAFLGKKADVERIWKVCEVNARLDECMSAIEAFG---KLGDVEKAEEIFENMFKT 443
Query: 344 CYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
F N +L Y+ K + +K + K + G P++ + Y+D +EKA
Sbjct: 444 WKTLSFEYYNAMLKVYANKKLFDKGKELAKRMGDDGCRLGPSTLDSLVKLYSDAGEVEKA 503
Query: 404 FECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK--VQKRNMYH 461
+ + + +NK +P + +LD DV E S ++ + Y
Sbjct: 504 DSILHK---LSYKNKI-KPLYTTYLMLLDSYSKKGDVHNAEKLFSKVRQMGYTGRIRQYQ 559
Query: 462 ALTEAHIRSGQEVDGLLESMKADDI 486
L EA++ + G E MKADDI
Sbjct: 560 LLLEAYLNAKTPPYGFKERMKADDI 584
>gi|11138066|dbj|BAB17739.1| putative DNA-binding protein [Oryza sativa Japonica Group]
Length = 591
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/445 (26%), Positives = 215/445 (48%), Gaps = 15/445 (3%)
Query: 46 LGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGL-AFSV 104
L P V + +W+ +G + EL V+ LR RK + ALQ+ E++ L
Sbjct: 131 LVSPRVDVAGATKKWLNDGNTLERSELFYVLLSLRKRKLYTKALQLLEYVEESKLFDLGE 190
Query: 105 HDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMK 164
D+A ++DL+ KV G+ AE Y ++ + + +Y LL V V ++ + KMK
Sbjct: 191 RDYASRVDLVAKVHGIYKAEKYIENVPASHRGEVVYRTLLANCVAIANVKKTEQVFNKMK 250
Query: 165 EMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELS 224
++G + + N ++ LY + +K+ DVL M++ V P F+Y++ +++ GA ++
Sbjct: 251 DLGFPVTVFSCNQLLLLYKRVDK-KKLGDVLTMMEKENVKPSLFTYKLLVDTKGAARDIE 309
Query: 225 SMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCE-DIVSKSKDALGYN 283
ME V+Q M++ I D +T+A +YI G +EKA L++ E D +++++ A +
Sbjct: 310 DMEKVIQAMQADG-IEPDLLIQATIARHYIFGGYREKAEAILEQIEGDDINENRSACKF- 367
Query: 284 HLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELS 343
++ YA LG K ++ + W + ++ + I G K+G++E+AE++ E +
Sbjct: 368 -VLPLYAFLGKKADVERIWKVCEVNARLDECMSAIEAFG---KLGDVEKAEEIFENMFKT 423
Query: 344 CYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
F N +L Y+ K + +K + K + G P++ + Y+D +EKA
Sbjct: 424 WKTLSFEYYNAMLKVYANKKLFDKGKELAKRMGDDGCRLGPSTLDSLVKLYSDAGEVEKA 483
Query: 404 FECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK--VQKRNMYH 461
+ + + +NK +P + +LD DV E S ++ + Y
Sbjct: 484 DSILHK---LSYKNKI-KPLYTTYLMLLDSYSKKGDVHNAEKLFSKVRQMGYTGRIRQYQ 539
Query: 462 ALTEAHIRSGQEVDGLLESMKADDI 486
L EA++ + G E MKADDI
Sbjct: 540 LLLEAYLNAKTPPYGFKERMKADDI 564
>gi|226528511|ref|NP_001143788.1| uncharacterized protein LOC100276555 [Zea mays]
gi|195627038|gb|ACG35349.1| hypothetical protein [Zea mays]
Length = 422
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 174/345 (50%), Gaps = 14/345 (4%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
++L SRI LG S T L++W EG+ EL+R+ R L +R+KHAL+V++WM
Sbjct: 54 DDLRSRIFRLGLAKRSATAALEKWSSEGRDAPAAELRRIARDLTRVRRYKHALEVADWMK 113
Query: 97 GQGLA-FSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDE 155
+ S +D+ +++DLI KV G +AE +F L K + Y ALL+ Y R + D
Sbjct: 114 THHESDLSENDYGMRIDLITKVFGASAAEDFFEKLPAGAKSLEAYTALLHSYGRSKMTDR 173
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
+ L ++MK AL YN +M LY + G+ K+ V ++K V PD F+Y + +
Sbjct: 174 AERLFERMKGASLPMDALVYNEMMTLYISVGELGKVEAVAEELKRQNVSPDLFTYNLRAS 233
Query: 216 SYGARSELSSMENVLQEMES--QSHISMDWGTYSTVANYYIIAG--LKEKAIIYLKKCED 271
+ A +L VL EM +S W Y +A+ Y+ AG L ++ E
Sbjct: 234 AAAASMDLEGFRAVLDEMSRDLKSSTEGGWALYRDLASVYVDAGQLLGSVNSPPVEAGEA 293
Query: 272 IVSKSKDALGYNHLISHYASLGNKDEMMKFW-------GLQKIKCKKQLNRDYITMLGSL 324
+S+ ++ + Y+ L+ +A LG + + W Q ++ +R+Y+ ++ S
Sbjct: 294 RISQ-REWITYDFLVILHAGLGRPERIRDIWRSMVATSQSQSQSQQRMTSRNYVCVVSSY 352
Query: 325 VKIGELEEAEKMLEEWELS-CYCYDFRVPNIILLGYSQKGMIEKA 368
+ G LE+A +++++W+ S +D N +L + G+ + A
Sbjct: 353 LACGRLEDAGEVVDQWQRSKAPEFDVSACNRLLDALLRAGLADAA 397
>gi|296090465|emb|CBI40661.3| unnamed protein product [Vitis vinifera]
Length = 287
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/221 (36%), Positives = 131/221 (59%), Gaps = 1/221 (0%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWM- 95
++L SRI L P S+T VL +W+ EG ++ EL+ + ++LR +R+KHAL++SEWM
Sbjct: 51 DDLKSRIFKLRLPKRSVTNVLQRWLGEGNQVHISELRNISKELRRAQRYKHALEISEWMV 110
Query: 96 SGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDE 155
S S D+AV++DL+ +V G+++AE YF L K + Y ALL+ Y L ++
Sbjct: 111 SHDEFELSDSDNAVRIDLMTRVFGIDAAERYFEGLPSAAKTSETYTALLHSYAGAKLAEK 170
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
+ L +++KE + L YN +M LY + GQ EK+ V+ ++K V PD F+Y + ++
Sbjct: 171 AEELYERIKESNVPLNILLYNEMMTLYMSVGQVEKVSLVVEELKRQKVVPDLFTYNLWVS 230
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
S A ++ + +L+EM + S + W Y +AN YI+A
Sbjct: 231 SCAATLDIDGVRRILKEMSNNSSANDGWVRYRNLANIYIMA 271
>gi|226530081|ref|NP_001147602.1| DNA-binding protein [Zea mays]
gi|195612448|gb|ACG28054.1| DNA-binding protein [Zea mays]
Length = 622
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 122/447 (27%), Positives = 214/447 (47%), Gaps = 25/447 (5%)
Query: 49 PDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS-GQGLAFSVHDH 107
P +T L++W +G EL V+ LR R + AL++ EW+ Q F D+
Sbjct: 165 PRHQVTSALEKWAKDGNAFDRGELYYVLLNLRKRHWYSKALELVEWVQKSQLFEFVERDY 224
Query: 108 AVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMG 167
A LDL KV GL AE + + + +Y LL V + +S + +MK++G
Sbjct: 225 AAHLDLTAKVYGLHKAEQTIEKIPASCRGEIVYRTLLANCVSASNIKKSEQVFNRMKDLG 284
Query: 168 SFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSME 227
+ ++N ++ LY + +KI DVL M++ V P F+Y+I +++ G+ ++ +ME
Sbjct: 285 FPVTQFSFNQLLLLYKRLDR-KKIADVLAMMEKEDVKPSLFTYKILVDAKGSVGDIEAME 343
Query: 228 NVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCE-DIVSKSKDALGYNHLI 286
V++ ME S I D +T+A +YI G +EKA LK E D + K++ A L+
Sbjct: 344 KVIESMEKDS-IEPDLTFNATIARHYIFYGQREKAEALLKAMEGDDIQKNRAAC--KTLL 400
Query: 287 SHYASLGNKDEMMKFWGLQKIKCKKQLN-RDYITMLGSLVKIGELEEAEKMLEEWELSCY 345
+A LGN D + + W C+ + ++ + + K+G++E+AEK+ E+ +
Sbjct: 401 PLHAFLGNSDAVERIWK----ACEDNTRVAESVSAIEAFGKLGDVEKAEKVFEDMLVHWK 456
Query: 346 CYDFRVPNIILLGYSQKGMIEKADAVLKEI----VKKGKTPTPNSWSIIAAGYADKNNME 401
+ N +L Y+ +++K + K + V+ G PT ++ + Y + +E
Sbjct: 457 TLSSKFYNALLKVYADHNLLDKGKELAKRMDENRVRFG-APTLDA---LVKLYVEAGEVE 512
Query: 402 KAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK--VQKRNM 459
KA E + L++ K P + ++LD DV E + L+ + M
Sbjct: 513 KA-ESLVHKLSIQNHIK---PIYNTYMTLLDSYSKKGDVRNSEKVFNKLRQSGYTGRIRM 568
Query: 460 YHALTEAHIRSGQEVDGLLESMKADDI 486
Y +L A++ + G E MKAD+I
Sbjct: 569 YQSLLHAYVHAKAPAYGFRERMKADNI 595
>gi|357131430|ref|XP_003567340.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Brachypodium distachyon]
Length = 612
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 127/446 (28%), Positives = 226/446 (50%), Gaps = 28/446 (6%)
Query: 50 DVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSV-HDHA 108
DVS T L +WV +G + ++ + LR R+ F ALQ+ EW+ L V D+A
Sbjct: 159 DVSGT--LKKWVNDGNTVDRSDVFFAVLNLRRRRFFSKALQLLEWLEESKLIELVERDYA 216
Query: 109 VQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGS 168
+LDL+ KV G+ AE + +++ + + +Y LL V E V ++ + KMK++G
Sbjct: 217 SRLDLMAKVHGIYKAEKFIDNIPASLRGEIVYRTLLANCVAEVNVKKAEEVFNKMKDLGF 276
Query: 169 FGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMEN 228
+ N ++ LY + +KI DVL M++ V P F+Y++ +++ GA ++ ME
Sbjct: 277 PVTVFAINQLLLLYKRVDK-KKISDVLTMMEKEDVKPSLFTYKLLVDTKGASRDIEGMEK 335
Query: 229 VLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISH 288
V+Q ME++ I+ D +T+A +YI G +EKA L+ E + ++++A ++
Sbjct: 336 VVQSMEAEG-ITPDLLLQATIAKHYIFGGHREKAEAILESMEGDMKENRNAC--KMVMPL 392
Query: 289 YASLGNKDEMMKFWGLQKIKCKKQLNRD-YITMLGSLVKIGELEEAEK----MLEEWE-L 342
YA LG KD++ + W + C+ D ++ + + ++G++E+AE+ M + W+ L
Sbjct: 393 YAFLGKKDDVERIWKV----CQSNTRLDECLSAIEAFGRLGDVEKAEEVFGNMFKTWKTL 448
Query: 343 SCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEK 402
S Y N ++ Y+ + +++K + K + + G ++ + Y D +EK
Sbjct: 449 SSKYY-----NAMMRVYANQNLMDKGKELAKRMEEDGCRLGISTLDSLVKLYVDAGEVEK 503
Query: 403 AFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK-IKVQKR-NMY 460
A E + L+V +NK +P+ S +LD DV E S L+ + R Y
Sbjct: 504 A-ESLLHKLSV--KNKM-KPQYSSYLMLLDSYSKIGDVHNSEKVFSKLRQMGYNGRIRQY 559
Query: 461 HALTEAHIRSGQEVDGLLESMKADDI 486
L A++ + V G E MKAD+I
Sbjct: 560 QLLLHAYLHAKAPVYGFRERMKADNI 585
>gi|297834428|ref|XP_002885096.1| hypothetical protein ARALYDRAFT_479008 [Arabidopsis lyrata subsp.
lyrata]
gi|297330936|gb|EFH61355.1| hypothetical protein ARALYDRAFT_479008 [Arabidopsis lyrata subsp.
lyrata]
Length = 605
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 126/475 (26%), Positives = 225/475 (47%), Gaps = 37/475 (7%)
Query: 29 RAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHA 88
+ K A++ LY I S+ VL++WV EG+ +S+ E+ I LR RK +
Sbjct: 132 KPTKKRAQSELYESIVAYK----SVKHVLEKWVKEGKDLSQAEVSLAIFHLRKRKYYAMC 187
Query: 89 LQVSEWMSGQG-LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALL-NC 146
LQ+ EW+ F+ ++A QLDL+ KV L+ AE + + + + + +Y LL NC
Sbjct: 188 LQLWEWLGANTQFEFTEANYASQLDLVAKVHSLQKAENFLKDIPESFRGEVVYRTLLANC 247
Query: 147 YVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPD 206
++ V+++ L KMKE+ S N ++ LY+ +KI DVLL M+ + P
Sbjct: 248 VLKHH-VNKAEDLFNKMKELKFPTSVFACNQLLLLYS-MHDRKKISDVLLLMERENIKPS 305
Query: 207 NFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYL 266
+Y+ INS G +++ ME +++ M+ + I +D +T+A YYI AGLKE+A +
Sbjct: 306 RGTYQFLINSKGLAGDITGMEKIVETMKEEG-IEVDPELQATLAKYYIRAGLKERAQDLM 364
Query: 267 KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVK 326
K+ E + L+ YA +G+ D ++++ N Y + ++
Sbjct: 365 KEIEG-KGLQQTPWVCRSLLPLYADIGDSD------NVRRLSTFVDQNLRYDNCISAIRA 417
Query: 327 IGELE-------EAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
G+L+ E+++E++++ F + I Y++ M+ K ++K + G
Sbjct: 418 WGKLKEVEEAEAVFERLVEKYKIFPMLPYFALMEI----YTENKMLAKGKDLVKRMGNAG 473
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVS--SILDWLGDN 437
T P++W + Y KA E K L ++ K + +P +S +IL+
Sbjct: 474 VTIGPSTWHALVKLYI------KAGEVGKAELILNRATKDNKMRPMFISYMAILEEYAKR 527
Query: 438 RDVEEVEAFVSSLKIKVQKRNM--YHALTEAHIRSGQEVDGLLESMKADDIDEDK 490
DV E +K + Y + A+I++ G+ E MKAD++ +K
Sbjct: 528 GDVHNTEKVFMKMKRASYAAQLMQYETVLLAYIKAKTPAYGMFERMKADNVFPNK 582
>gi|5103846|gb|AAD39676.1|AC007591_41 F9L1.43 [Arabidopsis thaliana]
Length = 623
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 119/446 (26%), Positives = 224/446 (50%), Gaps = 19/446 (4%)
Query: 51 VSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS-GQGLAFSVHDHAV 109
+S+ LD+WV +G+ + E + + QLR R+ F ALQ++EW+ + D+A
Sbjct: 169 LSVGSALDKWVEQGKDTNRKEFESAMLQLRKRRMFGRALQMTEWLDENKQFEMEERDYAC 228
Query: 110 QLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSF 169
+LDLI KVRG E Y ++ + + + +Y LL +V V + ++ KMK++G
Sbjct: 229 RLDLISKVRGWYKGEAYIKTIPESFRGELVYRTLLANHVATSNVRTAEAVFNKMKDLGFP 288
Query: 170 GSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENV 229
S N ++ LY + +KI DVLL +++ + P+ +Y+I I++ G+ ++++ ME +
Sbjct: 289 LSTFTCNQMLILYKRVDK-KKIADVLLLLEKENLKPNLNTYKILIDTKGSSNDITGMEQI 347
Query: 230 LQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHY 289
++ M+S+ + +D + +A +Y AGLKEKA LK+ E S ++ L+S Y
Sbjct: 348 VETMKSEG-VELDLRARALIARHYASAGLKEKAEKVLKEMEG-ESLEENRHMCKDLLSVY 405
Query: 290 ASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLV---KIGELEEAEKMLEEWELSCYC 346
L +DE+ + W + C++ N Y +L +++ KI ++++AE + E+ +
Sbjct: 406 GYLQREDEVRRVWKI----CEE--NPRYNEVLAAILAFGKIDKVKDAEAVFEKVLKMSHR 459
Query: 347 YDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFEC 406
V +++L Y M+ + ++K++ G +W + Y + +EKA
Sbjct: 460 VSSNVYSVLLRVYVDHKMVSEGKDLVKQMSDSGCNIGALTWDAVIKLYVEAGEVEKAESS 519
Query: 407 MKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK-IKVQKRN-MYHALT 464
+ +A+ ++K +P S ++ DV E +K Q R Y L
Sbjct: 520 LSKAI----QSKQIKPLMSSFMYLMHEYVRRGDVHNTEKIFQRMKQAGYQSRFWAYQTLI 575
Query: 465 EAHIRSGQEVDGLLESMKADDIDEDK 490
+A++ + G+ E MKAD+I +K
Sbjct: 576 QAYVNAKAPAYGMKERMKADNIFPNK 601
>gi|125532536|gb|EAY79101.1| hypothetical protein OsI_34208 [Oryza sativa Indica Group]
Length = 369
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 149/265 (56%), Gaps = 5/265 (1%)
Query: 228 NVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLIS 287
VL++ +S + + M W +Y+T+ + +G++E+A+ ++ E ++K + + Y L++
Sbjct: 97 QVLEKADSCNDL-MTWHSYATIGKVLMQSGMEERALQAFQESEKKIAKKSNRVAYGFLLT 155
Query: 288 HYASLGNKDEMMKFWGLQKIKCKKQ-LNRDYITMLGSLVKIGELEEAEKMLEEWELSCYC 346
YA LG E+ + W + K K N Y+ + L+K+ ++ AEK EEWE
Sbjct: 156 MYADLGMNSEVDRIWDVYKSKVPASACNSMYMCRISVLLKMNDIVGAEKAYEEWESKHVY 215
Query: 347 YDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFEC 406
+D R+ N++L Y ++G++EKA+A++ + VKKG+TP N+W +A GY KA +
Sbjct: 216 HDSRLINLLLTAYCKEGLMEKAEALVDQFVKKGRTPFGNTWYKLAGGYFKVGQASKAADL 275
Query: 407 MKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL-KIKVQKRNMYHALTE 465
K+ALA + W P + V L++ + ++VE E +S L ++ R++YH L +
Sbjct: 276 TKKALA--SASNEWIPDLTNVLMSLNYFAEQKNVEAAEEMMSLLQRLVTPTRDIYHGLLK 333
Query: 466 AHIRSGQEVDGLLESMKADDIDEDK 490
++ +G+ V LL MK D ++ D+
Sbjct: 334 TYVNAGKPVSDLLRRMKKDGMEADE 358
>gi|145335742|ref|NP_173001.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806396|sp|Q9XI21.2|PPR44_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g15480, mitochondrial; Flags: Precursor
gi|332191207|gb|AEE29328.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 594
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 118/442 (26%), Positives = 222/442 (50%), Gaps = 19/442 (4%)
Query: 51 VSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS-GQGLAFSVHDHAV 109
+S+ LD+WV +G+ + E + + QLR R+ F ALQ++EW+ + D+A
Sbjct: 140 LSVGSALDKWVEQGKDTNRKEFESAMLQLRKRRMFGRALQMTEWLDENKQFEMEERDYAC 199
Query: 110 QLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSF 169
+LDLI KVRG E Y ++ + + + +Y LL +V V + ++ KMK++G
Sbjct: 200 RLDLISKVRGWYKGEAYIKTIPESFRGELVYRTLLANHVATSNVRTAEAVFNKMKDLGFP 259
Query: 170 GSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENV 229
S N ++ LY + +KI DVLL +++ + P+ +Y+I I++ G+ ++++ ME +
Sbjct: 260 LSTFTCNQMLILYKRVDK-KKIADVLLLLEKENLKPNLNTYKILIDTKGSSNDITGMEQI 318
Query: 230 LQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHY 289
++ M+S+ + +D + +A +Y AGLKEKA LK+ E S ++ L+S Y
Sbjct: 319 VETMKSEG-VELDLRARALIARHYASAGLKEKAEKVLKEMEG-ESLEENRHMCKDLLSVY 376
Query: 290 ASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLV---KIGELEEAEKMLEEWELSCYC 346
L +DE+ + W + C++ N Y +L +++ KI ++++AE + E+ +
Sbjct: 377 GYLQREDEVRRVWKI----CEE--NPRYNEVLAAILAFGKIDKVKDAEAVFEKVLKMSHR 430
Query: 347 YDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFEC 406
V +++L Y M+ + ++K++ G +W + Y + +EKA
Sbjct: 431 VSSNVYSVLLRVYVDHKMVSEGKDLVKQMSDSGCNIGALTWDAVIKLYVEAGEVEKAESS 490
Query: 407 MKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK-IKVQKRN-MYHALT 464
+ +A+ ++K +P S ++ DV E +K Q R Y L
Sbjct: 491 LSKAI----QSKQIKPLMSSFMYLMHEYVRRGDVHNTEKIFQRMKQAGYQSRFWAYQTLI 546
Query: 465 EAHIRSGQEVDGLLESMKADDI 486
+A++ + G+ E MKAD+I
Sbjct: 547 QAYVNAKAPAYGMKERMKADNI 568
>gi|298571984|gb|ADI87989.1| PPR protein [Silene latifolia]
Length = 224
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 131/217 (60%), Gaps = 1/217 (0%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
+LYGALLN YV + D++ +LM++M+ G + L YN +M LY + +K+ D++ +
Sbjct: 9 RLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEDLVSE 68
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
MK+ + D++SY I +++ G++ SME V QEM+ I +W T+ST+A+ Y G
Sbjct: 69 MKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTMASMYAKLG 128
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
EKA L+ E ++ ++D + Y++L+S Y SLGN+ E+ + W + K K N Y
Sbjct: 129 QLEKAEQCLRNLETRIT-NRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPKIPNWGY 187
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNI 354
+++ SLV+ G++E AEK+ EEW +D ++ N+
Sbjct: 188 HSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 9/203 (4%)
Query: 277 KDALGYNHLISHY--ASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
KD Y L++ Y A + +K E + K C L Y M+ +K+ EL++ E
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPL--PYNVMMTLYMKLDELDKVE 63
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI-VKKGKTPTPNSWSIIAAG 393
++ E + D NI L +G E + V +E+ + P ++S +A+
Sbjct: 64 DLVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTMASM 123
Query: 394 YADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK 453
YA +EKA +C++ L N+ P L+ S+ LG+ +V V S+ K
Sbjct: 124 YAKLGQLEKAEQCLRN-LETRITNRDRMPYHYLL-SLYGSLGNRGEVYRVWNIYKSVFPK 181
Query: 454 VQKRNMYHALTEAHIRSGQEVDG 476
+ YH++ + +RSG +++G
Sbjct: 182 IPNWG-YHSVISSLVRSG-DIEG 202
>gi|298571988|gb|ADI87991.1| PPR protein [Silene latifolia]
Length = 224
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 132/217 (60%), Gaps = 1/217 (0%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
+LYGALLN YV + D++ +LM++M+ G + L YN +M LY + +K+ +++ +
Sbjct: 9 RLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEELVSE 68
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
MK+ + D++SY I +++ G++ SME V QEM+ I +W T+ST+A+ Y +G
Sbjct: 69 MKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMYAKSG 128
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
EKA L+ E ++ ++D + Y++L+S Y SLGN+ E+ + W + K K N Y
Sbjct: 129 QLEKAEQCLRNLETRIT-NRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPKIPNWGY 187
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNI 354
+++ SLV+ G++E AEK+ EEW +D ++ N+
Sbjct: 188 HSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 42.0 bits (97), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 9/203 (4%)
Query: 277 KDALGYNHLISHY--ASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
KD Y L++ Y A + +K E + K C L Y M+ +K+ EL++ E
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPL--PYNVMMTLYMKLDELDKVE 63
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI-VKKGKTPTPNSWSIIAAG 393
+++ E + D NI L +G E + V +E+ + P ++S +A+
Sbjct: 64 ELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASM 123
Query: 394 YADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK 453
YA +EKA +C++ L N+ P L+ S+ LG+ +V V S+ K
Sbjct: 124 YAKSGQLEKAEQCLRN-LETRITNRDRMPYHYLL-SLYGSLGNRGEVYRVWNIYKSVFPK 181
Query: 454 VQKRNMYHALTEAHIRSGQEVDG 476
+ YH++ + +RSG +++G
Sbjct: 182 IPNWG-YHSVISSLVRSG-DIEG 202
>gi|6958202|gb|AAF32491.1|AF091837_1 DNA-binding protein [Triticum aestivum]
Length = 612
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 116/442 (26%), Positives = 218/442 (49%), Gaps = 15/442 (3%)
Query: 49 PDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWM-SGQGLAFSVHDH 107
P ++ L +W+ G ++ VI LR RK + ALQ+ EW+ + + D+
Sbjct: 156 PRNGVSGTLKKWLDGGNTFDRSDIFYVIMNLRKRKFYFKALQLLEWLEDSKVIDLGERDY 215
Query: 108 AVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMG 167
A +LDL+ KV G+ AE Y +S+ + + +Y LL V E V +S + KMK++G
Sbjct: 216 ASRLDLVAKVHGVYKAEKYIDSIPISHRGEIVYRTLLANCVSEANVKKSEEVFNKMKDLG 275
Query: 168 SFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSME 227
+ N ++ LY + +KI DVL M++ V P F+Y++ +++ GA +++ ME
Sbjct: 276 FPVTVFAINQLLLLYKRVDK-KKIADVLAKMEKENVKPSLFTYKLLVDTKGAIRDIAGME 334
Query: 228 NVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCE-DIVSKSKDALGYNHLI 286
V++ M+++ + D +T+A +YI AG +EKA L+ E + +++A L+
Sbjct: 335 KVVESMQAEG-VEPDLLFQATIAKHYIFAGHREKAEAILESMEGGDIKGNRNACKI--LL 391
Query: 287 SHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYC 346
YA LG KD++ + W Q + +L+ + ++ + S ++G++E AEK+ E+ +
Sbjct: 392 PLYAFLGKKDDVERMW--QVCEANPRLD-ECLSAIESFGRLGDVERAEKVFEDMFATWKT 448
Query: 347 YDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFEC 406
+ N ++ Y+ + + +K + K + + G ++ + Y ++KA
Sbjct: 449 LSSKFYNALMKVYADQNLFKKGKELAKRMDEDGCRLGISTIDSLVKLYVGAGEVDKAESI 508
Query: 407 MKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK-IKVQKR-NMYHALT 464
+ + + + NK +P+ S +LD D+ E L+ + R Y L
Sbjct: 509 LHK---LSKSNKM-KPQYSSYLMLLDTYSKKGDIHNSEKVFDQLRQMGYNGRVRQYQLLL 564
Query: 465 EAHIRSGQEVDGLLESMKADDI 486
A++ + V G E MKAD+I
Sbjct: 565 NAYVHAKTPVYGFRERMKADNI 586
>gi|298572060|gb|ADI88027.1| PPR protein [Silene latifolia]
Length = 224
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 131/217 (60%), Gaps = 1/217 (0%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
+LYGALLN YV + D++ +LM++M+ G + L YN +M LY + +K+ +++ +
Sbjct: 9 RLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEELVSE 68
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
MK+ + D++SY I +++ G++ SME V QEM+ I +W T+ST+A+ Y G
Sbjct: 69 MKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMYAKLG 128
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
EKA L+ E ++ ++D + Y++L+S Y SLGN+ E+ + W + K K N Y
Sbjct: 129 KLEKAEQCLRNLETRIT-NRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPKIPNWGY 187
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNI 354
+++ SLV+ G++E AEK+ EEW +D ++ N+
Sbjct: 188 HSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 9/203 (4%)
Query: 277 KDALGYNHLISHY--ASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
KD Y L++ Y A + +K E + K C L Y M+ +K+ EL++ E
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPL--PYNVMMTLYMKLDELDKVE 63
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI-VKKGKTPTPNSWSIIAAG 393
+++ E + D NI L +G E + V +E+ + P ++S +A+
Sbjct: 64 ELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASM 123
Query: 394 YADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK 453
YA +EKA +C++ L N+ P L+ S+ LG+ +V V S+ K
Sbjct: 124 YAKLGKLEKAEQCLRN-LETRITNRDRMPYHYLL-SLYGSLGNRGEVYRVWNIYKSVFPK 181
Query: 454 VQKRNMYHALTEAHIRSGQEVDG 476
+ YH++ + +RSG +++G
Sbjct: 182 IPNWG-YHSVISSLVRSG-DIEG 202
>gi|298572008|gb|ADI88001.1| PPR protein [Silene latifolia]
gi|298572012|gb|ADI88003.1| PPR protein [Silene latifolia]
gi|298572028|gb|ADI88011.1| PPR protein [Silene latifolia]
gi|298572052|gb|ADI88023.1| PPR protein [Silene latifolia]
Length = 224
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 131/217 (60%), Gaps = 1/217 (0%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
+LYGALLN YV + D++ +LM++M+ G + L YN +M LY + +K+ +++ +
Sbjct: 9 RLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEELVSE 68
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
MK+ + D++SY I +++ G++ SME V QEM+ I +W T+ST+A+ Y G
Sbjct: 69 MKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTMASMYAKLG 128
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
EKA L+ E ++ ++D + Y++L+S Y SLGN+ E+ + W + K K N Y
Sbjct: 129 QLEKAEQCLRNLETRIT-NRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPKIPNWGY 187
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNI 354
+++ SLV+ G++E AEK+ EEW +D ++ N+
Sbjct: 188 HSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 9/203 (4%)
Query: 277 KDALGYNHLISHY--ASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
KD Y L++ Y A + +K E + K C L Y M+ +K+ EL++ E
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPL--PYNVMMTLYMKLDELDKVE 63
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI-VKKGKTPTPNSWSIIAAG 393
+++ E + D NI L +G E + V +E+ + P ++S +A+
Sbjct: 64 ELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTMASM 123
Query: 394 YADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK 453
YA +EKA +C++ L N+ P L+ S+ LG+ +V V S+ K
Sbjct: 124 YAKLGQLEKAEQCLRN-LETRITNRDRMPYHYLL-SLYGSLGNRGEVYRVWNIYKSVFPK 181
Query: 454 VQKRNMYHALTEAHIRSGQEVDG 476
+ YH++ + +RSG +++G
Sbjct: 182 IPNWG-YHSVISSLVRSG-DIEG 202
>gi|224125312|ref|XP_002329774.1| predicted protein [Populus trichocarpa]
gi|222870836|gb|EEF07967.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 168/358 (46%), Gaps = 70/358 (19%)
Query: 126 YFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNT 185
Y N++ + K +Y ALLNCY RE V+++++ +K+ ++G S L +N +M LY
Sbjct: 18 YANAIPQKLKGFMVYTALLNCYAREKDVEKAVATFKKLTDIGVMRSPLVFNILMYLY--- 74
Query: 186 GQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGT 245
++ + DW T
Sbjct: 75 -----------------------------------------------FQTDGEVVGDWNT 87
Query: 246 YSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQ 305
Y A+ + AG+ E A+ LKK E +++ ++ ++ L+ YA GNKDE+ + W
Sbjct: 88 YCVAADRCLKAGIMEMAMTMLKKLEGQITEKTKSIAFDTLLKLYARKGNKDELYRIWKSD 147
Query: 306 KIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMI 365
+ K K N+ Y++M+ SL+ + ++E AE M ++WE Y FRVPNI++ Y + ++
Sbjct: 148 E-KRDKIYNKGYMSMISSLLMLDDIEAAEMMFKKWESRGLSYYFRVPNILINAYCRNNLL 206
Query: 366 EKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPS 425
EKA +++ + KG P+ ++W +A+GY + E MK+A+ V W+P
Sbjct: 207 EKAGSLIDHAMMKGSEPSADAWYSLASGYLE-------VEAMKKAILVCPG---WKPIKE 256
Query: 426 LVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNMYHALTEAHIRS-----GQEVDGLL 478
++S LD L D + E F+ L+ + N++ + +R+ + DGLL
Sbjct: 257 TLASCLDHLEGKGDQNKAEEFIELLRTE----NIFSPVAHNRLRTYIKGLKSQSDGLL 310
>gi|298572960|gb|ADI88477.1| PPR protein [Silene vulgaris]
Length = 224
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 130/217 (59%), Gaps = 1/217 (0%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
+LYGALLN YV + D++ +LM++M+ G + L YN +M LY + +K+ +++ +
Sbjct: 9 RLYGALLNAYVAAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEELVSE 68
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
MK+ + D++SY I +++ G++ SME V QEM+ I+ +W T+ST+A Y G
Sbjct: 69 MKQKKIQLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIAPNWTTFSTMAAMYSKLG 128
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
EKA L+ E ++ ++D + Y++LIS Y SLGN+ E+ + W + K N Y
Sbjct: 129 QLEKAEQCLRNLETRIT-NRDRMPYHYLISLYGSLGNRGEVYRVWNIYKSVFPNIPNWGY 187
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNI 354
+++ SLV+ G++E AEK+ EEW +D ++ N+
Sbjct: 188 HSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 19/208 (9%)
Query: 277 KDALGYNHLISHY--ASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
KD Y L++ Y A + +K E + K C L Y M+ +K+ EL++ E
Sbjct: 6 KDMRLYGALLNAYVAAKIRDKAETLMEQMRNKGYCITPL--PYNVMMTLYMKLDELDKVE 63
Query: 335 KMLEEW-----ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI-VKKGKTPTPNSWS 388
+++ E +L Y Y NI L +G E + V +E+ + P ++S
Sbjct: 64 ELVSEMKQKKIQLDSYSY-----NIWLSARGSQGSPESMEQVFQEMDLDPRIAPNWTTFS 118
Query: 389 IIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVS 448
+AA Y+ +EKA +C++ L N+ P L+ S+ LG+ +V V
Sbjct: 119 TMAAMYSKLGQLEKAEQCLRN-LETRITNRDRMPYHYLI-SLYGSLGNRGEVYRVWNIYK 176
Query: 449 SLKIKVQKRNMYHALTEAHIRSGQEVDG 476
S+ + YH++ + +RSG +++G
Sbjct: 177 SVFPNIPNWG-YHSVISSLVRSG-DIEG 202
>gi|298571976|gb|ADI87985.1| PPR protein [Silene latifolia]
gi|298571992|gb|ADI87993.1| PPR protein [Silene latifolia]
gi|298572000|gb|ADI87997.1| PPR protein [Silene latifolia]
gi|298572064|gb|ADI88029.1| PPR protein [Silene latifolia]
Length = 224
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 131/217 (60%), Gaps = 1/217 (0%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
+LYGALLN YV + D++ +LM++M+ G + L YN +M LY + +K+ +++ +
Sbjct: 9 RLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEELVSE 68
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
MK+ + D++SY I +++ G++ SME V QEM+ I +W T+ST+A+ Y +G
Sbjct: 69 MKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMYAKSG 128
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
EKA L+ E ++ ++D + Y++L+S Y SLGN+ E+ + W + K N Y
Sbjct: 129 QLEKAEQCLRNLETRIT-NRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNWGY 187
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNI 354
+++ SLV+ G++E AEK+ EEW +D ++ N+
Sbjct: 188 HSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 9/203 (4%)
Query: 277 KDALGYNHLISHY--ASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
KD Y L++ Y A + +K E + K C L Y M+ +K+ EL++ E
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPL--PYNVMMTLYMKLDELDKVE 63
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI-VKKGKTPTPNSWSIIAAG 393
+++ E + D NI L +G E + V +E+ + P ++S +A+
Sbjct: 64 ELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASM 123
Query: 394 YADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK 453
YA +EKA +C++ L N+ P L+ S+ LG+ +V V S+
Sbjct: 124 YAKSGQLEKAEQCLRN-LETRITNRDRMPYHYLL-SLYGSLGNRGEVYRVWNIYKSVFPN 181
Query: 454 VQKRNMYHALTEAHIRSGQEVDG 476
+ YH++ + +RSG +++G
Sbjct: 182 IPNWG-YHSVISSLVRSG-DIEG 202
>gi|298572036|gb|ADI88015.1| PPR protein [Silene latifolia]
Length = 224
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 131/217 (60%), Gaps = 1/217 (0%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
+LYGALLN YV + D++ +LM++M+ G + L YN +M LY + +K+ +++ +
Sbjct: 9 RLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEELVSE 68
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
MK+ + D++SY I +++ G++ SME V QEM+ I +W T+ST+A+ Y +G
Sbjct: 69 MKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTMASMYAKSG 128
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
EKA L+ E ++ ++D + Y++L+S Y SLGN+ E+ + W + K N Y
Sbjct: 129 QLEKAEQCLRNLETRIT-NRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNWGY 187
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNI 354
+++ SLV+ G++E AEK+ EEW +D ++ N+
Sbjct: 188 HSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 9/203 (4%)
Query: 277 KDALGYNHLISHY--ASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
KD Y L++ Y A + +K E + K C L Y M+ +K+ EL++ E
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPL--PYNVMMTLYMKLDELDKVE 63
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI-VKKGKTPTPNSWSIIAAG 393
+++ E + D NI L +G E + V +E+ + P ++S +A+
Sbjct: 64 ELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTMASM 123
Query: 394 YADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK 453
YA +EKA +C++ L N+ P L+ S+ LG+ +V V S+
Sbjct: 124 YAKSGQLEKAEQCLRN-LETRITNRDRMPYHYLL-SLYGSLGNRGEVYRVWNIYKSVFPN 181
Query: 454 VQKRNMYHALTEAHIRSGQEVDG 476
+ YH++ + +RSG +++G
Sbjct: 182 IPNWG-YHSVISSLVRSG-DIEG 202
>gi|298572018|gb|ADI88006.1| PPR protein [Silene latifolia]
Length = 224
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 130/217 (59%), Gaps = 1/217 (0%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
+LYGALLN YV + D++ +LM++M+ G + L YN +M LY + +K+ +++ +
Sbjct: 9 RLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEELVSE 68
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
MK+ + D++SY I +++ G+ SME V QEM+ I +W T+ST+A+ Y +G
Sbjct: 69 MKQKKISLDSYSYNIWLSARGSHGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMYAKSG 128
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
EKA L+ E ++ ++D + Y++L+S Y SLGN+ E+ + W + K N Y
Sbjct: 129 QLEKAEQCLRNLETRIT-NRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNWGY 187
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNI 354
+++ SLV+ G++E AEK+ EEW +D ++ N+
Sbjct: 188 HSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 91/203 (44%), Gaps = 9/203 (4%)
Query: 277 KDALGYNHLISHY--ASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
KD Y L++ Y A + +K E + K C L Y M+ +K+ EL++ E
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPL--PYNVMMTLYMKLDELDKVE 63
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI-VKKGKTPTPNSWSIIAAG 393
+++ E + D NI L G E + V +E+ + P ++S +A+
Sbjct: 64 ELVSEMKQKKISLDSYSYNIWLSARGSHGSPESMEQVFQEMDLDPRIVPNWTTFSTMASM 123
Query: 394 YADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK 453
YA +EKA +C++ L N+ P L+ S+ LG+ +V V S+
Sbjct: 124 YAKSGQLEKAEQCLRN-LETRITNRDRMPYHYLL-SLYGSLGNRGEVYRVWNIYKSVFPN 181
Query: 454 VQKRNMYHALTEAHIRSGQEVDG 476
+ YH++ + +RSG +++G
Sbjct: 182 IPNWG-YHSVISSLVRSG-DIEG 202
>gi|298571978|gb|ADI87986.1| PPR protein [Silene latifolia]
gi|298571980|gb|ADI87987.1| PPR protein [Silene latifolia]
gi|298571982|gb|ADI87988.1| PPR protein [Silene latifolia]
gi|298571990|gb|ADI87992.1| PPR protein [Silene latifolia]
gi|298571994|gb|ADI87994.1| PPR protein [Silene latifolia]
gi|298571996|gb|ADI87995.1| PPR protein [Silene latifolia]
gi|298571998|gb|ADI87996.1| PPR protein [Silene latifolia]
gi|298572002|gb|ADI87998.1| PPR protein [Silene latifolia]
gi|298572020|gb|ADI88007.1| PPR protein [Silene latifolia]
gi|298572022|gb|ADI88008.1| PPR protein [Silene latifolia]
Length = 224
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 130/217 (59%), Gaps = 1/217 (0%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
+LYGALLN YV + D++ +LM++M+ G + L YN +M LY + +K+ +++ +
Sbjct: 9 RLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEELVSE 68
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
MK+ + D++SY I +++ G++ SME V QEM+ I +W T+ST+A+ Y G
Sbjct: 69 MKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMYAKLG 128
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
EKA L+ E ++ ++D + Y++L+S Y SLGN+ E+ + W + K N Y
Sbjct: 129 QLEKAEQCLRNLETRIT-NRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNWGY 187
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNI 354
+++ SLV+ G++E AEK+ EEW +D ++ N+
Sbjct: 188 HSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 9/203 (4%)
Query: 277 KDALGYNHLISHY--ASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
KD Y L++ Y A + +K E + K C L Y M+ +K+ EL++ E
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPL--PYNVMMTLYMKLDELDKVE 63
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI-VKKGKTPTPNSWSIIAAG 393
+++ E + D NI L +G E + V +E+ + P ++S +A+
Sbjct: 64 ELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASM 123
Query: 394 YADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK 453
YA +EKA +C++ L N+ P L+ S+ LG+ +V V S+
Sbjct: 124 YAKLGQLEKAEQCLRN-LETRITNRDRMPYHYLL-SLYGSLGNRGEVYRVWNIYKSVFPN 181
Query: 454 VQKRNMYHALTEAHIRSGQEVDG 476
+ YH++ + +RSG +++G
Sbjct: 182 IPNWG-YHSVISSLVRSG-DIEG 202
>gi|298572004|gb|ADI87999.1| PPR protein [Silene latifolia]
gi|298572006|gb|ADI88000.1| PPR protein [Silene latifolia]
Length = 224
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 131/217 (60%), Gaps = 1/217 (0%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
+LYGALLN YV + D++ +LM++M+ G + L YN +M LY + +K+ +++ +
Sbjct: 9 RLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEELVSE 68
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
MK+ + D++SY I +++ G++ SME V +EM+ I +W T+ST+A+ Y G
Sbjct: 69 MKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTMASMYAKLG 128
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
EKA L+ E ++ ++D + Y++L+S Y SLGN+ E+ + W + K K N Y
Sbjct: 129 QLEKAEQCLRNLETRIT-NRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPKIPNWGY 187
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNI 354
+++ SLV+ G++E AEK+ EEW +D ++ N+
Sbjct: 188 HSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 9/203 (4%)
Query: 277 KDALGYNHLISHY--ASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
KD Y L++ Y A + +K E + K C L Y M+ +K+ EL++ E
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPL--PYNVMMTLYMKLDELDKVE 63
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI-VKKGKTPTPNSWSIIAAG 393
+++ E + D NI L +G E + V +E+ + P ++S +A+
Sbjct: 64 ELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTMASM 123
Query: 394 YADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK 453
YA +EKA +C++ L N+ P L+ S+ LG+ +V V S+ K
Sbjct: 124 YAKLGQLEKAEQCLRN-LETRITNRDRMPYHYLL-SLYGSLGNRGEVYRVWNIYKSVFPK 181
Query: 454 VQKRNMYHALTEAHIRSGQEVDG 476
+ YH++ + +RSG +++G
Sbjct: 182 IPNWG-YHSVISSLVRSG-DIEG 202
>gi|298572040|gb|ADI88017.1| PPR protein [Silene latifolia]
Length = 224
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 130/217 (59%), Gaps = 1/217 (0%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
+LYGALLN YV + D++ +LM++M+ G + L YN +M LY + +K+ +++ +
Sbjct: 9 RLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEELVSE 68
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
MK+ + D++SY I +++ G++ SME V QEM+ I +W T+ST+A+ Y G
Sbjct: 69 MKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMYAKLG 128
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
EKA L+ E ++ ++D + Y++L+S Y SLGN+ E+ + W + K N Y
Sbjct: 129 QLEKAEQCLRNLETRIT-NRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFTNIPNWGY 187
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNI 354
+++ SLV+ G++E AEK+ EEW +D ++ N+
Sbjct: 188 HSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 9/203 (4%)
Query: 277 KDALGYNHLISHY--ASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
KD Y L++ Y A + +K E + K C L Y M+ +K+ EL++ E
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPL--PYNVMMTLYMKLDELDKVE 63
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI-VKKGKTPTPNSWSIIAAG 393
+++ E + D NI L +G E + V +E+ + P ++S +A+
Sbjct: 64 ELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASM 123
Query: 394 YADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK 453
YA +EKA +C++ L N+ P L+ S+ LG+ +V V S+
Sbjct: 124 YAKLGQLEKAEQCLRN-LETRITNRDRMPYHYLL-SLYGSLGNRGEVYRVWNIYKSVFTN 181
Query: 454 VQKRNMYHALTEAHIRSGQEVDG 476
+ YH++ + +RSG +++G
Sbjct: 182 IPNWG-YHSVISSLVRSG-DIEG 202
>gi|125535921|gb|EAY82409.1| hypothetical protein OsI_37623 [Oryza sativa Indica Group]
Length = 611
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 115/446 (25%), Positives = 214/446 (47%), Gaps = 17/446 (3%)
Query: 46 LGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLA-FSV 104
L P V + L +W+ +G + EL V+ LR RK + ALQ+ E++ L
Sbjct: 151 LESPRVDVAGALKKWLNDGNTLDRSELFYVLLSLRRRKLYIKALQLLEYVEESKLIDLGE 210
Query: 105 HDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMK 164
D+A ++DL+ K + AE Y ++ + + +Y LL V V ++ + KMK
Sbjct: 211 RDYASRVDLVAKTHSIYKAEKYIENVPASHRGEIVYRTLLANCVAIANVKKAEQVFNKMK 270
Query: 165 EMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELS 224
++G S + N ++ LY + +K+ DVL M++ V P F+Y++ +++ GA ++
Sbjct: 271 DLGFPVSVFSCNQLLLLYKRVDK-KKLGDVLTMMEKENVKPSLFTYKLLVDTKGAARDIE 329
Query: 225 SMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKK-CEDIVSKSKDALGYN 283
ME V+Q M++ I D +T+A +YI G +EKA L++ D +++++ A +
Sbjct: 330 DMEKVIQAMQADG-IEPDLLFQATIARHYIFGGYREKAEAILEQMVGDDINENRSACKF- 387
Query: 284 HLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD-YITMLGSLVKIGELEEAEKMLEEWEL 342
++ YA LG D++ + W + C+ D ++ + + K+G++E+AE++ +
Sbjct: 388 -VLPLYAFLGKNDDVERIWKV----CEANARLDECMSAIEAFGKLGDVEKAEEIFDNMFK 442
Query: 343 SCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEK 402
+ + N +L Y+ K + +K + K + G P + + Y+D +EK
Sbjct: 443 TWKTLSSKYYNAMLKVYANKKLFDKGKELAKRMGDDGCRLGPYTLDSLVKLYSDAGEVEK 502
Query: 403 AFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK--VQKRNMY 460
A + + + +NK +P + +LD DV E S ++ + Y
Sbjct: 503 ADSILHK---LSYKNKI-KPMYTTYLMLLDSYSKKGDVHNAEKLFSKVRQMGYTGRIRQY 558
Query: 461 HALTEAHIRSGQEVDGLLESMKADDI 486
L EA++ + G E MKADDI
Sbjct: 559 QLLLEAYLNAKTPPYGFKERMKADDI 584
>gi|15229739|ref|NP_187745.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|12322901|gb|AAG51439.1|AC008153_12 hypothetical protein; 6614-8314 [Arabidopsis thaliana]
gi|332641514|gb|AEE75035.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 541
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/441 (26%), Positives = 206/441 (46%), Gaps = 72/441 (16%)
Query: 72 LQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLN 131
L+ ++ +LRS R + AL+VS+WM Q + D + + L KV LE AE +F S+
Sbjct: 78 LRGIVEKLRSSNRPRQALEVSDWMVEQKMYNLPEDFSARFHLTEKVLNLEEAEKFFESIP 137
Query: 132 DEDKVDKLYGALLNCYVR---EGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQH 188
+ + + +Y +LL Y R E + ++ S+ +KMK++G YN + LY++ G
Sbjct: 138 ENMRFESMYNSLLRSYARQSGEKALKKAESVFKKMKKLGLLLRPSPYNSMTSLYSSLGNR 197
Query: 189 EKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYST 248
+K+ ++L +MKEN V DN + + Y A S++++M+ L + + + +D T
Sbjct: 198 DKVDEILREMKENNVELDNVTVNNALRVYAAVSDVATMDKFLADRKEITR--LDGLTMLA 255
Query: 249 VANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIK 308
+A Y L+S Y G +++ + W K
Sbjct: 256 MAKAY------------------------------ELMSLYGEAGEIEDVHRVWDKYKAT 285
Query: 309 CKKQLNRDYITMLGSLVKIGELEEAEKM-LEEWELSCYCYDFRVPNIILLGYSQKGMIEK 367
+K N ++ T++GSL+K+G+ + AEK+ EWE S +D R+P++++ GY +KGM+ K
Sbjct: 286 RQKD-NEEFRTLIGSLLKLGDTKGAEKIYYNEWECSGLEFDNRIPDMLVSGYREKGMVMK 344
Query: 368 ADA-----------------VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE----- 405
AD +L+E+ KKG +P + D N + KA E
Sbjct: 345 ADKLVNKTLWIRGLATPITLLLEEMDKKGNKVSPPGLRDLIKNLRDSNQLSKALEASTWM 404
Query: 406 CMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFV-SSLKIKVQKRNMYHALT 464
C K+ + E+ + + L +L +EE E F SS+ ++ ++Y L
Sbjct: 405 CQKKVFNLFSED--YATRLHLTEKVL-------GLEEAENFFESSIPENMKDYSVYDTLL 455
Query: 465 EAHIRSGQ---EVDGLLESMK 482
+ RS + + + E M+
Sbjct: 456 SCYARSSNTQSKAEAVFEKMR 476
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 96/191 (50%), Gaps = 8/191 (4%)
Query: 43 ISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAF 102
I L P +T +L++ +G K+S L+ +I+ LR + AL+ S WM Q F
Sbjct: 355 IRGLATP---ITLLLEEMDKKGNKVSPPGLRDLIKNLRDSNQLSKALEASTWMC-QKKVF 410
Query: 103 SV--HDHAVQLDLIGKVRGLESAETYFNSLNDEDKVD-KLYGALLNCYVREG-LVDESLS 158
++ D+A +L L KV GLE AE +F S E+ D +Y LL+CY R ++ +
Sbjct: 411 NLFSEDYATRLHLTEKVLGLEEAENFFESSIPENMKDYSVYDTLLSCYARSSNTQSKAEA 470
Query: 159 LMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYG 218
+ +KM+E+G +N ++ LY+ G+ + +L DMK + PD + + +
Sbjct: 471 VFEKMRELGLQSKLSPFNSLISLYSGQGKLSVVNILLCDMKHKNIEPDIVTRNNVLRANA 530
Query: 219 ARSELSSMENV 229
+ SME V
Sbjct: 531 YILAIDSMEKV 541
>gi|357119107|ref|XP_003561287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Brachypodium distachyon]
Length = 576
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/439 (24%), Positives = 208/439 (47%), Gaps = 13/439 (2%)
Query: 51 VSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS-GQGLAFSVHDHAV 109
+S+ VLD+W+ +G ++ E+ V+ L+ ++ + A Q EW+ G L F D+A
Sbjct: 122 LSVKSVLDKWIEDGNQLERNEVLLVLFHLKKQRLYWKAFQFMEWIERGHLLNFEERDYAC 181
Query: 110 QLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSF 169
LDLI + G+E A Y + + + + LY LL VR + ++ + ++++++
Sbjct: 182 HLDLIARNTGIEDARKYIDRVPKPFRNEVLYETLLVNCVRARDIQKAEEVFREIRDLSLP 241
Query: 170 GSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENV 229
+ N ++ LY + K+ D+++ M++ + P F+Y++ I+ G +++S +E
Sbjct: 242 LTVSACNQMILLYKRVAR-TKVADIIMLMEKENIKPSPFTYKLIIDLKGRSNDISGVEVT 300
Query: 230 LQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHY 289
L EM++ + + D+ T + VA +YI GL EKA + + E K K L+ Y
Sbjct: 301 LNEMKA-AGVEPDFVTQTMVAKFYISGGLIEKAKAVVSEIEMEYMKDKRH-AVRSLLHLY 358
Query: 290 ASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDF 349
A+L DE+ + W L C + D++ + + K+G +E+AE+ E +
Sbjct: 359 AALSKPDEVARIWKL----CTEPKLDDFMAAIEAWGKLGCIEQAEETFEAMLEATQKLSS 414
Query: 350 RVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
+ N +L Y++ +++K ++ + G P +W + Y + + KA ++
Sbjct: 415 KYYNGMLNVYAENKLMDKGKKFVERMSFDGCPNGPLTWDALVKLYVNSGEVAKADSFLQN 474
Query: 410 ALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK-IKVQKRN-MYHALTEAH 467
A E+N RP +L D+ E LK I+ R Y L EA+
Sbjct: 475 AT---EQNPDRRPTYGSYIYLLMAYAKMGDIYNAEKMFDRLKNIRYPGRKPPYPVLLEAY 531
Query: 468 IRSGQEVDGLLESMKADDI 486
+ + G +E M+AD +
Sbjct: 532 VNAKVRPHGFIERMRADGV 550
>gi|298572062|gb|ADI88028.1| PPR protein [Silene latifolia]
Length = 224
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 129/217 (59%), Gaps = 1/217 (0%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
+LYGALLN YV + D++ +LM++M+ G + L YN +M LY + +K+ +++ +
Sbjct: 9 RLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEELVSE 68
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
MK+ + D++SY I +++ G+ SME V QEM+ I +W T+ST+A+ Y G
Sbjct: 69 MKQKKISLDSYSYNIWLSARGSHGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMYAKLG 128
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
EKA L+ E ++ ++D + Y++L+S Y SLGN+ E+ + W + K N Y
Sbjct: 129 QLEKAEQCLRNLETRIT-NRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNWGY 187
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNI 354
+++ SLV+ G++E AEK+ EEW +D ++ N+
Sbjct: 188 HSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 91/203 (44%), Gaps = 9/203 (4%)
Query: 277 KDALGYNHLISHY--ASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
KD Y L++ Y A + +K E + K C L Y M+ +K+ EL++ E
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPL--PYNVMMTLYMKLDELDKVE 63
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI-VKKGKTPTPNSWSIIAAG 393
+++ E + D NI L G E + V +E+ + P ++S +A+
Sbjct: 64 ELVSEMKQKKISLDSYSYNIWLSARGSHGSPESMEQVFQEMDLDPRIVPNWTTFSTMASM 123
Query: 394 YADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK 453
YA +EKA +C++ L N+ P L+ S+ LG+ +V V S+
Sbjct: 124 YAKLGQLEKAEQCLRN-LETRITNRDRMPYHYLL-SLYGSLGNRGEVYRVWNIYKSVFPN 181
Query: 454 VQKRNMYHALTEAHIRSGQEVDG 476
+ YH++ + +RSG +++G
Sbjct: 182 IPNWG-YHSVISSLVRSG-DIEG 202
>gi|298572024|gb|ADI88009.1| PPR protein [Silene latifolia]
gi|298572032|gb|ADI88013.1| PPR protein [Silene latifolia]
gi|298572044|gb|ADI88019.1| PPR protein [Silene latifolia]
gi|298572056|gb|ADI88025.1| PPR protein [Silene latifolia]
Length = 224
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 130/217 (59%), Gaps = 1/217 (0%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
+LYGALLN YV + D++ +LM++M+ G + L YN +M LY + +K+ +++ +
Sbjct: 9 RLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEELVSE 68
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
MK+ + D++SY I +++ G++ SME V QEM+ I +W T+ST+A+ Y G
Sbjct: 69 MKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTMASMYAKLG 128
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
EKA L+ E ++ ++D + Y++L+S Y SLGN+ E+ + W + K N Y
Sbjct: 129 QLEKAEQCLRNLETRIT-NRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNWGY 187
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNI 354
+++ SLV+ G++E AEK+ EEW +D ++ N+
Sbjct: 188 HSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 9/203 (4%)
Query: 277 KDALGYNHLISHY--ASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
KD Y L++ Y A + +K E + K C L Y M+ +K+ EL++ E
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPL--PYNVMMTLYMKLDELDKVE 63
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI-VKKGKTPTPNSWSIIAAG 393
+++ E + D NI L +G E + V +E+ + P ++S +A+
Sbjct: 64 ELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTMASM 123
Query: 394 YADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK 453
YA +EKA +C++ L N+ P L+ S+ LG+ +V V S+
Sbjct: 124 YAKLGQLEKAEQCLRN-LETRITNRDRMPYHYLL-SLYGSLGNRGEVYRVWNIYKSVFPN 181
Query: 454 VQKRNMYHALTEAHIRSGQEVDG 476
+ YH++ + +RSG +++G
Sbjct: 182 IPNWG-YHSVISSLVRSG-DIEG 202
>gi|298572042|gb|ADI88018.1| PPR protein [Silene latifolia]
Length = 224
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 130/217 (59%), Gaps = 1/217 (0%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
+LYGALLN YV + D++ +LM++M+ G + L YN +M LY + +K+ +++ +
Sbjct: 9 RLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEELVSE 68
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
MK+ + D++SY I +++ G++ SME V QEM+ I +W T+ST+A+ Y G
Sbjct: 69 MKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMYAKLG 128
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
EKA L+ E ++ ++D + Y++L+S Y SLGN+ E+ + W + K N Y
Sbjct: 129 ELEKAEQCLRNLETRIT-NRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFTNIPNWGY 187
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNI 354
+++ SLV+ G++E AEK+ EEW +D ++ N+
Sbjct: 188 HSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 9/203 (4%)
Query: 277 KDALGYNHLISHY--ASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
KD Y L++ Y A + +K E + K C L Y M+ +K+ EL++ E
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPL--PYNVMMTLYMKLDELDKVE 63
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI-VKKGKTPTPNSWSIIAAG 393
+++ E + D NI L +G E + V +E+ + P ++S +A+
Sbjct: 64 ELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASM 123
Query: 394 YADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK 453
YA +EKA +C++ L N+ P L+ S+ LG+ +V V S+
Sbjct: 124 YAKLGELEKAEQCLRN-LETRITNRDRMPYHYLL-SLYGSLGNRGEVYRVWNIYKSVFTN 181
Query: 454 VQKRNMYHALTEAHIRSGQEVDG 476
+ YH++ + +RSG +++G
Sbjct: 182 IPNWG-YHSVISSLVRSG-DIEG 202
>gi|298572026|gb|ADI88010.1| PPR protein [Silene latifolia]
gi|298572046|gb|ADI88020.1| PPR protein [Silene latifolia]
Length = 224
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 130/217 (59%), Gaps = 1/217 (0%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
+LYGALLN YV + D++ +LM++M+ G + L YN +M LY + +K+ +++ +
Sbjct: 9 RLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEELVSE 68
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
MK+ + D++SY I +++ G++ SME V QEM+ I +W T+ST+A+ Y G
Sbjct: 69 MKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTMASMYAKLG 128
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
EKA L+ E ++ ++D + Y++L+S Y SLGN+ E+ + W + K N Y
Sbjct: 129 ELEKAEQCLRNLETRIT-NRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNWGY 187
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNI 354
+++ SLV+ G++E AEK+ EEW +D ++ N+
Sbjct: 188 HSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 38.5 bits (88), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 9/203 (4%)
Query: 277 KDALGYNHLISHY--ASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
KD Y L++ Y A + +K E + K C L Y M+ +K+ EL++ E
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPL--PYNVMMTLYMKLDELDKVE 63
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI-VKKGKTPTPNSWSIIAAG 393
+++ E + D NI L +G E + V +E+ + P ++S +A+
Sbjct: 64 ELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTMASM 123
Query: 394 YADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK 453
YA +EKA +C++ L N+ P L+ S+ LG+ +V V S+
Sbjct: 124 YAKLGELEKAEQCLRN-LETRITNRDRMPYHYLL-SLYGSLGNRGEVYRVWNIYKSVFPN 181
Query: 454 VQKRNMYHALTEAHIRSGQEVDG 476
+ YH++ + +RSG +++G
Sbjct: 182 IPNWG-YHSVISSLVRSG-DIEG 202
>gi|22331104|ref|NP_188178.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273796|sp|Q9LRP6.1|PP234_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g15590, mitochondrial; Flags: Precursor
gi|11994226|dbj|BAB01348.1| DNA-binding protein [Arabidopsis thaliana]
gi|20856658|gb|AAM26678.1| AT3g15590/MQD17_5 [Arabidopsis thaliana]
gi|27363266|gb|AAO11552.1| At3g15590/MQD17_5 [Arabidopsis thaliana]
gi|332642175|gb|AEE75696.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 610
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 117/450 (26%), Positives = 213/450 (47%), Gaps = 29/450 (6%)
Query: 52 SLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQG-LAFSVHDHAVQ 110
S+ VL++WV EG+ +S+ E+ I LR RK + LQ+ EW+ F+ ++A Q
Sbjct: 156 SVKHVLEKWVKEGKDLSQAEVTLAIHNLRKRKSYAMCLQLWEWLGANTQFEFTEANYASQ 215
Query: 111 LDLIGKVRGLESAETYFNSLNDEDKVDKLYGALL-NCYVREGLVDESLSLMQKMKEMGSF 169
LDL+ KV L+ AE + + + + + +Y LL NC ++ V+++ + KMKE+
Sbjct: 216 LDLVAKVHSLQKAEIFLKDIPESSRGEVVYRTLLANCVLKHH-VNKAEDIFNKMKELKFP 274
Query: 170 GSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENV 229
S N ++ LY+ +KI DVLL M+ + P +Y INS G +++ ME +
Sbjct: 275 TSVFACNQLLLLYS-MHDRKKISDVLLLMERENIKPSRATYHFLINSKGLAGDITGMEKI 333
Query: 230 LQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHY 289
++ ++ + I +D S +A YYI AGLKE+A +K+ E + L+ Y
Sbjct: 334 VETIKEEG-IELDPELQSILAKYYIRAGLKERAQDLMKEIEG-KGLQQTPWVCRSLLPLY 391
Query: 290 ASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELE-------EAEKMLEEWEL 342
A +G+ D ++++ N Y + ++ G+L+ E+++E++++
Sbjct: 392 ADIGDSD------NVRRLSRFVDQNPRYDNCISAIKAWGKLKEVEEAEAVFERLVEKYKI 445
Query: 343 SCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEK 402
F + I Y++ M+ K ++K + G P++W + Y + K
Sbjct: 446 FPMMPYFALMEI----YTENKMLAKGRDLVKRMGNAGIAIGPSTWHALVKLYIKAGEVGK 501
Query: 403 AFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNM--Y 460
A + A ++NK RP + +IL+ DV E +K + Y
Sbjct: 502 AELILNRAT---KDNKM-RPMFTTYMAILEEYAKRGDVHNTEKVFMKMKRASYAAQLMQY 557
Query: 461 HALTEAHIRSGQEVDGLLESMKADDIDEDK 490
+ A+I + G++E MKAD++ +K
Sbjct: 558 ETVLLAYINAKTPAYGMIERMKADNVFPNK 587
>gi|298572066|gb|ADI88030.1| PPR protein [Silene latifolia]
Length = 224
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 130/217 (59%), Gaps = 1/217 (0%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
+LYGALLN YV + D++ +LM++M+ G + L YN +M LY + +K+ +++ +
Sbjct: 9 RLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEELVSE 68
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
MK+ + D++SY I +++ G++ SME V QEM+ I +W T+ST+A+ Y G
Sbjct: 69 MKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMYAKLG 128
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
+KA L+ E ++ ++D + Y++L+S Y SLGN+ E+ + W + K N Y
Sbjct: 129 QLDKAEQCLRNLETRIT-NRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNWGY 187
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNI 354
+++ SLV+ G++E AEK+ EEW +D ++ N+
Sbjct: 188 HSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572014|gb|ADI88004.1| PPR protein [Silene latifolia]
gi|298572038|gb|ADI88016.1| PPR protein [Silene latifolia]
Length = 224
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 129/217 (59%), Gaps = 1/217 (0%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
+LYGALLN YV + D++ LM++M+ G + L YN +M LY + +K+ +++ +
Sbjct: 9 RLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEELVSE 68
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
MK+ + D++SY I +++ G++ SME V QEM+ I +W T+ST+A+ Y G
Sbjct: 69 MKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMYAKLG 128
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
EKA L+ E ++ ++D + Y++L+S Y SLGN+ E+ + W + K N Y
Sbjct: 129 QLEKAEQCLRNLETRIT-NRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNWGY 187
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNI 354
+++ SLV+ G++E AEK+ EEW +D ++ N+
Sbjct: 188 HSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 41.6 bits (96), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 9/203 (4%)
Query: 277 KDALGYNHLISHY--ASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
KD Y L++ Y A + +K EM+ K C L Y M+ +K+ EL++ E
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPL--PYNVMMTLYMKLDELDKVE 63
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI-VKKGKTPTPNSWSIIAAG 393
+++ E + D NI L +G E + V +E+ + P ++S +A+
Sbjct: 64 ELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASM 123
Query: 394 YADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK 453
YA +EKA +C++ L N+ P L+ S+ LG+ +V V S+
Sbjct: 124 YAKLGQLEKAEQCLRN-LETRITNRDRMPYHYLL-SLYGSLGNRGEVYRVWNIYKSVFPN 181
Query: 454 VQKRNMYHALTEAHIRSGQEVDG 476
+ YH++ + +RSG +++G
Sbjct: 182 IPNWG-YHSVISSLVRSG-DIEG 202
>gi|449437992|ref|XP_004136774.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 604
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 114/451 (25%), Positives = 217/451 (48%), Gaps = 33/451 (7%)
Query: 51 VSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHAL--------QVSEWMSGQG-LA 101
+S+ LD+WV EG+ ++ L F H + Q SEW+ G L
Sbjct: 154 LSVPSALDKWVSEGKDLNICFL------------FYHLIACISVWVSQFSEWLEANGQLE 201
Query: 102 FSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQ 161
F+ D+A +LDLI KV+GL AE+Y + + + ++ LL YV V ++ +
Sbjct: 202 FNQRDYASRLDLIAKVQGLPKAESYIAKIPQSFQGEVIHRTLLANYVAANNVKKAEEVFN 261
Query: 162 KMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARS 221
KMK++ + ++ ++ LY + K+ D+L M++ V P F+Y+I I++ G +
Sbjct: 262 KMKDLEFPMTPFAHDQMLILYKRIDKR-KLADILSLMEKENVKPSPFTYKILIDAKGLCN 320
Query: 222 ELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALG 281
++S ME V+ M+++ I D T S +A +Y+ GLK+KA + LK E+ SK L
Sbjct: 321 DISGMEQVVDSMKAEG-IKPDVSTLSLLAKHYVSNGLKDKAKVILKDMEENNSKG-SRLP 378
Query: 282 YNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWE 341
L+ Y +L +DE+ + W + + + + I G K+ ++EAEK+ + +
Sbjct: 379 CRILLPLYGALQMEDEVRRLWKICEANPHMEESMAAIVAWG---KLKNVQEAEKIFDRFV 435
Query: 342 LSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNME 401
+ R N ++ Y M+ K ++ ++ + G +W + Y + +E
Sbjct: 436 KTWKKPSTRHYNTMMNVYGGSKMLTKGKELVNQMAESGCRMDELTWDAVVKLYVEAGEVE 495
Query: 402 KAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKI--KVQKRNM 459
KA + +A+ +++ +P + +++D DV VE + ++ V + +
Sbjct: 496 KADSFLVKAVLQNKK----KPMFTTYITLMDRYASRGDVPNVEKNFAMMRRLGYVGRLSQ 551
Query: 460 YHALTEAHIRSGQEVDGLLESMKADDIDEDK 490
+ L +A++ + G+ E MKAD++ +K
Sbjct: 552 FQTLIQAYVNAKAPAYGMRERMKADNVFPNK 582
>gi|298572016|gb|ADI88005.1| PPR protein [Silene latifolia]
Length = 224
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 130/217 (59%), Gaps = 1/217 (0%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
+LYGALLN Y + D++ +LM++M+ G + L YN +M LY + +K+ +++ +
Sbjct: 9 RLYGALLNAYGGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEELVSE 68
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
MK+ + D++SY I +++ G++ SME V QEM+ I +W T+ST+A+ Y +G
Sbjct: 69 MKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMYAKSG 128
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
EKA L+ E ++ ++D + Y++L+S Y SLGN+ E+ + W + K N Y
Sbjct: 129 QLEKAEQCLRNLETRIT-NRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNWGY 187
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNI 354
+++ SLV+ G++E AEK+ EEW +D ++ N+
Sbjct: 188 HSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 9/203 (4%)
Query: 277 KDALGYNHLISHY--ASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
KD Y L++ Y A + +K E + K C L Y M+ +K+ EL++ E
Sbjct: 6 KDMRLYGALLNAYGGAKIRDKAETLMEQMRNKGYCITPL--PYNVMMTLYMKLDELDKVE 63
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI-VKKGKTPTPNSWSIIAAG 393
+++ E + D NI L +G E + V +E+ + P ++S +A+
Sbjct: 64 ELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASM 123
Query: 394 YADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK 453
YA +EKA +C++ L N+ P L+ S+ LG+ +V V S+
Sbjct: 124 YAKSGQLEKAEQCLRN-LETRITNRDRMPYHYLL-SLYGSLGNRGEVYRVWNIYKSVFPN 181
Query: 454 VQKRNMYHALTEAHIRSGQEVDG 476
+ YH++ + +RSG +++G
Sbjct: 182 IPNWG-YHSVISSLVRSG-DIEG 202
>gi|298571986|gb|ADI87990.1| PPR protein [Silene latifolia]
Length = 224
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 129/217 (59%), Gaps = 1/217 (0%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
+LYGALLN YV + D++ LM++M+ G + L YN +M LY + +K+ +++ +
Sbjct: 9 RLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEELVSE 68
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
MK+ + D++SY I +++ G++ SME V QEM+ I +W T+ST+A+ Y G
Sbjct: 69 MKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTMASMYAKLG 128
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
EKA L+ E ++ ++D + Y++L+S Y SLGN+ E+ + W + K N Y
Sbjct: 129 QLEKAEQCLRNLETRIT-NRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNWGY 187
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNI 354
+++ SLV+ G++E AEK+ EEW +D ++ N+
Sbjct: 188 HSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 9/203 (4%)
Query: 277 KDALGYNHLISHY--ASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
KD Y L++ Y A + +K EM+ K C L Y M+ +K+ EL++ E
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPL--PYNVMMTLYMKLDELDKVE 63
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI-VKKGKTPTPNSWSIIAAG 393
+++ E + D NI L +G E + V +E+ + P ++S +A+
Sbjct: 64 ELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTMASM 123
Query: 394 YADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK 453
YA +EKA +C++ L N+ P L+ S+ LG+ +V V S+
Sbjct: 124 YAKLGQLEKAEQCLRN-LETRITNRDRMPYHYLL-SLYGSLGNRGEVYRVWNIYKSVFPN 181
Query: 454 VQKRNMYHALTEAHIRSGQEVDG 476
+ YH++ + +RSG +++G
Sbjct: 182 IPNWG-YHSVISSLVRSG-DIEG 202
>gi|449523950|ref|XP_004168986.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 191
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 119/216 (55%), Gaps = 36/216 (16%)
Query: 20 NLEIFTRAY-RAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQ 78
NL F R + V +++LY RISP+GDP++S+TP+LDQWVLE + + EL+ +I++
Sbjct: 11 NLIAFRREFVNFYSTVVKDSLYRRISPVGDPNISVTPLLDQWVLESGLVQQDELRHIIKE 70
Query: 79 LRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDK 138
LR KRFKHAL+V E YFN++ + K +
Sbjct: 71 LRVYKRFKHALEV--------------------------------EDYFNNMPSQLKRCQ 98
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
++ ALLNCY E D++ +++QK+KEMG ++L YN M LY G+ E++ L
Sbjct: 99 VHIALLNCYAHEKYADKANAVLQKIKEMGFAKTSLPYNITMNLYHQIGEFERLDSPL--- 155
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEME 234
KE V D F+Y +++Y + + +E ++++ME
Sbjct: 156 KETDVDHDQFTYTTRLSAYATAFDFTGIEKIMEQME 191
>gi|298572010|gb|ADI88002.1| PPR protein [Silene latifolia]
gi|298572034|gb|ADI88014.1| PPR protein [Silene latifolia]
gi|298572054|gb|ADI88024.1| PPR protein [Silene latifolia]
Length = 224
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 130/217 (59%), Gaps = 1/217 (0%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
+LYGALLN YV + D++ +LM++M+ G + L YN +M LY + +K+ +++ +
Sbjct: 9 RLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEELVSE 68
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
MK+ + D++SY I +++ G++ SME V +EM+ I +W T+ST+A+ Y G
Sbjct: 69 MKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTMASMYAKLG 128
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
EKA L+ E ++ ++D + Y++L+S Y SLGN+ E+ + W + K N Y
Sbjct: 129 QLEKAEQCLRNLETRIT-NRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNWGY 187
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNI 354
+++ SLV+ G++E AEK+ EEW +D ++ N+
Sbjct: 188 HSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 9/203 (4%)
Query: 277 KDALGYNHLISHY--ASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
KD Y L++ Y A + +K E + K C L Y M+ +K+ EL++ E
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPL--PYNVMMTLYMKLDELDKVE 63
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI-VKKGKTPTPNSWSIIAAG 393
+++ E + D NI L +G E + V +E+ + P ++S +A+
Sbjct: 64 ELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTMASM 123
Query: 394 YADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK 453
YA +EKA +C++ L N+ P L+ S+ LG+ +V V S+
Sbjct: 124 YAKLGQLEKAEQCLRN-LETRITNRDRMPYHYLL-SLYGSLGNRGEVYRVWNIYKSVFPN 181
Query: 454 VQKRNMYHALTEAHIRSGQEVDG 476
+ YH++ + +RSG +++G
Sbjct: 182 IPNWG-YHSVISSLVRSG-DIEG 202
>gi|115487560|ref|NP_001066267.1| Os12g0170100 [Oryza sativa Japonica Group]
gi|77553759|gb|ABA96555.1| DNA-binding protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113648774|dbj|BAF29286.1| Os12g0170100 [Oryza sativa Japonica Group]
gi|125578643|gb|EAZ19789.1| hypothetical protein OsJ_35368 [Oryza sativa Japonica Group]
gi|215767656|dbj|BAG99884.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 611
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 114/446 (25%), Positives = 214/446 (47%), Gaps = 17/446 (3%)
Query: 46 LGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLA-FSV 104
L P V + L +W+ +G + EL V+ LR RK + ALQ+ E++ L
Sbjct: 151 LESPRVDVAGALKKWLNDGNTLDRSELFYVLLILRRRKLYIKALQLLEYVEESKLIDLGE 210
Query: 105 HDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMK 164
D+A ++DL+ K + AE Y ++ + + +Y LL V V ++ + KMK
Sbjct: 211 RDYASRVDLVAKTHSIYKAEKYIENVPASHRGEIVYRTLLANCVAIANVKKAEQVFNKMK 270
Query: 165 EMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELS 224
++G S + N ++ LY + +K+ DVL M++ V P F+Y++ +++ GA ++
Sbjct: 271 DLGFPVSVFSCNQLLLLYKRVDK-KKLGDVLTMMEKENVKPSLFTYKLLVDTKGAARDIE 329
Query: 225 SMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKK-CEDIVSKSKDALGYN 283
ME V+Q M++ I D +T+A +YI G +EK+ L++ D +++++ A +
Sbjct: 330 DMEKVIQAMQADG-IEPDLLFQATIARHYIFGGYREKSEAILEQMVGDDINENRSACKF- 387
Query: 284 HLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD-YITMLGSLVKIGELEEAEKMLEEWEL 342
++ YA LG D++ + W + C+ D ++ + + K+G++E+AE++ +
Sbjct: 388 -VLPLYAFLGKNDDVERIWKV----CEANARLDECMSAIEAFGKLGDVEKAEEIFDNMFK 442
Query: 343 SCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEK 402
+ + N +L Y+ K + +K + K + G P + + Y+D +EK
Sbjct: 443 TWKTLSSKYYNAMLKVYANKKLFDKGKELAKRMGDDGCRLGPYTLDSLVKLYSDAGEVEK 502
Query: 403 AFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK--VQKRNMY 460
A + + + +NK +P + +LD DV E S ++ + Y
Sbjct: 503 ADSILHK---LSYKNKI-KPMYTTYLMLLDSYSKKGDVHNAEKLFSKVRQMGYTGRIRQY 558
Query: 461 HALTEAHIRSGQEVDGLLESMKADDI 486
L EA++ + G E MKADDI
Sbjct: 559 QLLLEAYLNAKTPPYGFKERMKADDI 584
>gi|298572058|gb|ADI88026.1| PPR protein [Silene latifolia]
Length = 224
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 129/217 (59%), Gaps = 1/217 (0%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
+LYGALLN YV + D++ LM++M+ G + L YN +M LY + +K+ +++ +
Sbjct: 9 RLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEELVSE 68
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
MK+ + D++SY I +++ G++ SME V +EM+ I +W T+ST+A+ Y G
Sbjct: 69 MKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTMASMYAKLG 128
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
EKA L+ E ++ ++D + Y++L+S Y SLGN+ E+ + W + K N Y
Sbjct: 129 QLEKAEQCLRNLETRIT-NRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNWGY 187
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNI 354
+++ SLV+ G++E AEK+ EEW +D ++ N+
Sbjct: 188 HSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 9/203 (4%)
Query: 277 KDALGYNHLISHY--ASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
KD Y L++ Y A + +K EM+ K C L Y M+ +K+ EL++ E
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPL--PYNVMMTLYMKLDELDKVE 63
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI-VKKGKTPTPNSWSIIAAG 393
+++ E + D NI L +G E + V +E+ + P ++S +A+
Sbjct: 64 ELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTMASM 123
Query: 394 YADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK 453
YA +EKA +C++ L N+ P L+ S+ LG+ +V V S+
Sbjct: 124 YAKLGQLEKAEQCLRN-LETRITNRDRMPYHYLL-SLYGSLGNRGEVYRVWNIYKSVFPN 181
Query: 454 VQKRNMYHALTEAHIRSGQEVDG 476
+ YH++ + +RSG +++G
Sbjct: 182 IPNWG-YHSVISSLVRSG-DIEG 202
>gi|298572048|gb|ADI88021.1| PPR protein [Silene latifolia]
Length = 224
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 130/217 (59%), Gaps = 1/217 (0%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
+LYGALLN YV + D++ +LM++M+ G + L YN +M LY + +++ +++ +
Sbjct: 9 RLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDEVEELVSE 68
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
MK+ + D++SY I +++ G++ SME V +EM+ I +W T+ST+A+ Y G
Sbjct: 69 MKQKKISLDSYSYNIWLSTRGSQGSPESMEQVFREMDLDPRIIPNWTTFSTMASMYAKLG 128
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
EKA L+ E ++ ++D + Y++L+S Y SLGN+ E+ + W + K N Y
Sbjct: 129 QLEKAEQCLRNLETRIT-NRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNWGY 187
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNI 354
+++ SLV+ G++E AEK+ EEW +D ++ N+
Sbjct: 188 HSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 9/203 (4%)
Query: 277 KDALGYNHLISHY--ASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
KD Y L++ Y A + +K E + K C L Y M+ +K+ EL+E E
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPL--PYNVMMTLYMKLDELDEVE 63
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI-VKKGKTPTPNSWSIIAAG 393
+++ E + D NI L +G E + V +E+ + P ++S +A+
Sbjct: 64 ELVSEMKQKKISLDSYSYNIWLSTRGSQGSPESMEQVFREMDLDPRIIPNWTTFSTMASM 123
Query: 394 YADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK 453
YA +EKA +C++ L N+ P L+ S+ LG+ +V V S+
Sbjct: 124 YAKLGQLEKAEQCLRN-LETRITNRDRMPYHYLL-SLYGSLGNRGEVYRVWNIYKSVFPN 181
Query: 454 VQKRNMYHALTEAHIRSGQEVDG 476
+ YH++ + +RSG +++G
Sbjct: 182 IPNWG-YHSVISSLVRSG-DIEG 202
>gi|298572030|gb|ADI88012.1| PPR protein [Silene latifolia]
Length = 224
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 130/217 (59%), Gaps = 1/217 (0%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
+LYGALLN YV + D++ LM++M+ G + L YN +M LY + +++ +++ +
Sbjct: 9 RLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELDEVEELVSE 68
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
MK+ + D++SY I +++ G++ SME V +EM+ I +W T+ST+A+ Y G
Sbjct: 69 MKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTMASMYAKLG 128
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
EKA L+ E ++ ++D + Y++L+S Y SLGN+ E+ + W + K K N Y
Sbjct: 129 ELEKAEQCLRNLETRIT-NRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPKIPNWGY 187
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNI 354
+++ SLV+ G++E AEK+ EEW +D ++ N+
Sbjct: 188 HSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 94/203 (46%), Gaps = 9/203 (4%)
Query: 277 KDALGYNHLISHY--ASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
KD Y L++ Y A + +K EM+ K C L Y M+ +K+ EL+E E
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPL--PYNVMMTLYMKLDELDEVE 63
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI-VKKGKTPTPNSWSIIAAG 393
+++ E + D NI L +G E + V +E+ + P ++S +A+
Sbjct: 64 ELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTMASM 123
Query: 394 YADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK 453
YA +EKA +C++ L N+ P L+ S+ LG+ +V V S+ K
Sbjct: 124 YAKLGELEKAEQCLRN-LETRITNRDRMPYHYLL-SLYGSLGNRGEVYRVWNIYKSVFPK 181
Query: 454 VQKRNMYHALTEAHIRSGQEVDG 476
+ YH++ + +RSG +++G
Sbjct: 182 IPNWG-YHSVISSLVRSG-DIEG 202
>gi|298572050|gb|ADI88022.1| PPR protein [Silene latifolia]
Length = 224
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 130/217 (59%), Gaps = 1/217 (0%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
+LYGALLN YV + D++ +LM++M+ G + L YN +M LY + +++ +++ +
Sbjct: 9 RLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDEVEELVSE 68
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
MK+ + D++SY I +++ G++ SME V +EM+ I +W T+ST+A+ Y G
Sbjct: 69 MKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTMASMYAKLG 128
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
EKA L+ E ++ ++D + Y++L+S Y SLGN+ E+ + W + K N Y
Sbjct: 129 QLEKAEQCLRNLETRIT-NRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNWGY 187
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNI 354
+++ SLV+ G++E AEK+ EEW +D ++ N+
Sbjct: 188 HSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 9/203 (4%)
Query: 277 KDALGYNHLISHY--ASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
KD Y L++ Y A + +K E + K C L Y M+ +K+ EL+E E
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPL--PYNVMMTLYMKLDELDEVE 63
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI-VKKGKTPTPNSWSIIAAG 393
+++ E + D NI L +G E + V +E+ + P ++S +A+
Sbjct: 64 ELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTMASM 123
Query: 394 YADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK 453
YA +EKA +C++ L N+ P L+ S+ LG+ +V V S+
Sbjct: 124 YAKLGQLEKAEQCLRN-LETRITNRDRMPYHYLL-SLYGSLGNRGEVYRVWNIYKSVFPN 181
Query: 454 VQKRNMYHALTEAHIRSGQEVDG 476
+ YH++ + +RSG +++G
Sbjct: 182 IPNWG-YHSVISSLVRSG-DIEG 202
>gi|22165078|gb|AAM93695.1| putative leaf protein [Oryza sativa Japonica Group]
Length = 372
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 188/411 (45%), Gaps = 88/411 (21%)
Query: 90 QVSEWMSGQ-GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYV 148
Q+S WM+ + L S D A +L+LI KV GL+ A YF+S+ D+ K + YG+LL CY
Sbjct: 29 QLSMWMTERLHLHLSPGDVANRLELITKVYGLDRAVEYFDSMPDQLKQQQCYGSLLKCYA 88
Query: 149 REGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNF 208
V+++ L +KM+ MG S +
Sbjct: 89 EANCVEKAEELFEKMRGMGMASS------------------------------------Y 112
Query: 209 SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY--- 265
+Y + + Y ++ + ++ Q ME +S I D T T ++A L++K +
Sbjct: 113 AYNVMMRLYLQNGQVERVHSMHQAME-ESGIVPDVSTTHT-----LVAVLRKKKTLVAAY 166
Query: 266 -----LKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITM 320
+K E+++ K+ N Y+
Sbjct: 167 VVAEDIKAIENVLEKANSC----------------------------------NSMYMCR 192
Query: 321 LGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGK 380
+G L+K+ ++ AEK EEWE +D R+ N+++ Y ++G+++KA+A++ + +KKG+
Sbjct: 193 IGVLLKMNDMVGAEKAYEEWESKHVYHDSRLINLLVDAYCKEGLMDKAEALVDQFIKKGR 252
Query: 381 TPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDV 440
P N+ +A GY + KA + K+ALA + W P + V L++ + ++V
Sbjct: 253 MPFANTCYKLAGGYFKVGQVSKAADLTKKALA--SASNEWIPDLTNVLMSLNYFAEQKNV 310
Query: 441 EEVEAFVSSL-KIKVQKRNMYHALTEAHIRSGQEVDGLLESMKADDIDEDK 490
E E +S L ++ R++YH L + ++ +G+ V LL MK D ++ D+
Sbjct: 311 EAAEEMMSLLQRLVTPTRDIYHGLLKTYVNAGKPVSDLLHRMKKDGMEADE 361
>gi|12321886|gb|AAG50982.1|AC073395_24 hypothetical protein, 3' partial; 101251-102939 [Arabidopsis
thaliana]
Length = 532
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 115/441 (26%), Positives = 201/441 (45%), Gaps = 78/441 (17%)
Query: 72 LQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLN 131
L+ ++ +LRS R + AL+VS+WM Q + D + + L KV LE AE +F S+
Sbjct: 76 LRGIVEKLRSSNRPRQALEVSDWMVEQKMYNLPEDFSARFHLTEKVLNLEEAEKFFESIP 135
Query: 132 DEDKVDKLYGALLNCYVR---EGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQH 188
+ + + +Y +LL Y R E + ++ S+ +KMK++G YN + LY++ G
Sbjct: 136 ENMRFESMYNSLLRSYARQSGEKALKKAESVFKKMKKLGLLLRPSPYNSMTSLYSSLGNR 195
Query: 189 EKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYST 248
+K+ ++L +MKEN V DN + + Y A S++++M+ L +
Sbjct: 196 DKVDEILREMKENNVELDNVTVNNALRVYAAVSDVATMDKFLAD---------------- 239
Query: 249 VANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIK 308
K I L D L + Y G +++ + W K
Sbjct: 240 -----------RKEITRL-----------DGLTMLAMAKAYVRDGEIEDVHRVWDKYKAT 277
Query: 309 CKKQLNRDYITMLGSLVKIGELEEAEKM-LEEWELSCYCYDFRVPNIILLGYSQKGMIEK 367
+K N ++ T++GSL+K+G+ + AEK+ EWE S +D R+P++++ GY +KGM+ K
Sbjct: 278 RQKD-NEEFRTLIGSLLKLGDTKGAEKIYYNEWECSGLEFDNRIPDMLVSGYREKGMVMK 336
Query: 368 ADA-----------------VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE----- 405
AD +L+E+ KKG +P + D N + KA E
Sbjct: 337 ADKLVNKTLWIRGLATPITLLLEEMDKKGNKVSPPGLRDLIKNLRDSNQLSKALEASTWM 396
Query: 406 CMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFV-SSLKIKVQKRNMYHALT 464
C K+ + E+ + + L +L +EE E F SS+ ++ ++Y L
Sbjct: 397 CQKKVFNLFSED--YATRLHLTEKVL-------GLEEAENFFESSIPENMKDYSVYDTLL 447
Query: 465 EAHIRSGQ---EVDGLLESMK 482
+ RS + + + E M+
Sbjct: 448 SCYARSSNTQSKAEAVFEKMR 468
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 88/168 (52%), Gaps = 8/168 (4%)
Query: 43 ISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAF 102
I L P +T +L++ +G K+S L+ +I+ LR + AL+ S WM Q F
Sbjct: 347 IRGLATP---ITLLLEEMDKKGNKVSPPGLRDLIKNLRDSNQLSKALEASTWMC-QKKVF 402
Query: 103 SV--HDHAVQLDLIGKVRGLESAETYFNSLNDEDKVD-KLYGALLNCYVREG-LVDESLS 158
++ D+A +L L KV GLE AE +F S E+ D +Y LL+CY R ++ +
Sbjct: 403 NLFSEDYATRLHLTEKVLGLEEAENFFESSIPENMKDYSVYDTLLSCYARSSNTQSKAEA 462
Query: 159 LMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPD 206
+ +KM+E+G +N ++ LY+ G+ + +L DMK + PD
Sbjct: 463 VFEKMRELGLQSKLSPFNSLISLYSGQGKLSVVNILLCDMKHKNIEPD 510
>gi|297596551|ref|NP_001042753.2| Os01g0280400 [Oryza sativa Japonica Group]
gi|255673117|dbj|BAF04667.2| Os01g0280400, partial [Oryza sativa Japonica Group]
Length = 426
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 198/409 (48%), Gaps = 15/409 (3%)
Query: 82 RKRFKHALQVSEWMSGQGLA-FSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLY 140
R+ H LQ+ E++ L D+A ++DL+ KV G+ AE Y ++ + + +Y
Sbjct: 2 RRYLLHFLQLLEYVEESKLFDLGERDYASRVDLVAKVHGIYKAEKYIENVPASHRGEVVY 61
Query: 141 GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKE 200
LL V V ++ + KMK++G + + N ++ LY + +K+ DVL M++
Sbjct: 62 RTLLANCVAIANVKKTEQVFNKMKDLGFPVTVFSCNQLLLLYKRVDK-KKLGDVLTMMEK 120
Query: 201 NGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKE 260
V P F+Y++ +++ GA ++ ME V+Q M++ I D +T+A +YI G +E
Sbjct: 121 ENVKPSLFTYKLLVDTKGAARDIEDMEKVIQAMQADG-IEPDLLIQATIARHYIFGGYRE 179
Query: 261 KAIIYLKKCE-DIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
KA L++ E D +++++ A + ++ YA LG K ++ + W + ++ + I
Sbjct: 180 KAEAILEQIEGDDINENRSACKF--VLPLYAFLGKKADVERIWKVCEVNARLDECMSAIE 237
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
G K+G++E+AE++ E + F N +L Y+ K + +K + K + G
Sbjct: 238 AFG---KLGDVEKAEEIFENMFKTWKTLSFEYYNAMLKVYANKKLFDKGKELAKRMGDDG 294
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRD 439
P++ + Y+D +EKA + + + +NK +P + +LD D
Sbjct: 295 CRLGPSTLDSLVKLYSDAGEVEKADSILHK---LSYKNKI-KPLYTTYLMLLDSYSKKGD 350
Query: 440 VEEVEAFVSSLKIK--VQKRNMYHALTEAHIRSGQEVDGLLESMKADDI 486
V E S ++ + Y L EA++ + G E MKADDI
Sbjct: 351 VHNAEKLFSKVRQMGYTGRIRQYQLLLEAYLNAKTPPYGFKERMKADDI 399
>gi|297800434|ref|XP_002868101.1| hypothetical protein ARALYDRAFT_915040 [Arabidopsis lyrata subsp.
lyrata]
gi|297313937|gb|EFH44360.1| hypothetical protein ARALYDRAFT_915040 [Arabidopsis lyrata subsp.
lyrata]
Length = 495
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 178/370 (48%), Gaps = 31/370 (8%)
Query: 13 KRNFTKTNLEIFTRAYRAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELEL 72
+R +N R+Y V A NL SRI + + +TP+L W +G ++ +L
Sbjct: 12 RRILAHSNRSCLFRSYGTVS-AADQNLPSRIVTNSNQNAHITPMLASWQKQGHQVKPSDL 70
Query: 73 QRVIRQLRSRKRFKHALQVSEWMSGQGLAFSV--HDHAVQLDLIGKVRGLESAETYFNSL 130
+ I+ LR +F AL+ SEWM G+ F + D++ +L L+ V GLE AE +F S+
Sbjct: 71 RGFIKNLRGSNQFSKALEASEWM-GEQKVFDIVPEDYSARLHLVENVLGLEEAEKFFKSI 129
Query: 131 NDEDKVDKLYGALLNCYVR-EGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHE 189
+Y LL+ Y + E +D++ + +KM+E+G +N ++ LY + +
Sbjct: 130 PKNMTDYFVYATLLSSYTKSENTLDKAEATFEKMRELGFLLKPSPFNSMISLYGQLQKLD 189
Query: 190 KIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTV 249
+ ++ +M+E V D+ + + Y ++ +ME ++ Q I ++ GT +
Sbjct: 190 MVEKLVREMQETKVECDSPTVNNVLRVYADTCKIKAMETFKTWVDEQG-IKLEGGTIVAM 248
Query: 250 ANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASL-GNKDEMMKFWGLQKIK 308
A Y+ +G EKA I Y ++ G++ E+ + W K +
Sbjct: 249 AKAYLRSGSIEKA-----------------------IEMYGNVAGSEKEVYRLWDEYKKE 285
Query: 309 CKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKA 368
K N Y T+L SL+K+ ++ AEK+ EEW+ D +P+++L Y +GM
Sbjct: 286 TKVNDN-GYRTVLSSLLKLDNVQGAEKIYEEWKPEGPKLDMSIPSLLLSRYYAEGMEINI 344
Query: 369 DAVLKEIVKK 378
D ++K I KK
Sbjct: 345 DQMVKSIRKK 354
>gi|224072985|ref|XP_002303946.1| predicted protein [Populus trichocarpa]
gi|222841378|gb|EEE78925.1| predicted protein [Populus trichocarpa]
Length = 451
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 194/406 (47%), Gaps = 20/406 (4%)
Query: 88 ALQVSEWMS-GQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNC 146
+LQ SEW+ + F+ D+A LD I KV GL AE + + + + +Y LL
Sbjct: 33 SLQFSEWLERSKQTDFTERDYACHLDCIAKVLGLWKAEKFIEKIPESFRGKLVYQTLLAS 92
Query: 147 YVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPD 206
V + ++ S+ +KM+++G + ++ +Y + +KIP++LL MK+ + P
Sbjct: 93 CVSVLNIKKAESVFRKMRDLGLPITVEACEQMIIIYKRL-EKKKIPNILLMMKDQNIKPS 151
Query: 207 NFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYL 266
+Y++ I++ ++ + ME +++ M ++ + +D + +A +YI GLK+KA + L
Sbjct: 152 FLTYKLLIDAKCQFNDTTGMEKLVEAMRNEG-MELDVFALAVIARHYISVGLKDKADLIL 210
Query: 267 KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVK 326
K+ E K L+S YASLGN DE+ + W K K+ + I + + K
Sbjct: 211 KQIEKRKQKGGGLGARRSLLSLYASLGNADEVGRIWKECKADPKQS---ECIAAIRAWGK 267
Query: 327 IGELEEAEK----MLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTP 382
+G++EEAE ML+ W+ + Y + N+ Y + K +++++ G
Sbjct: 268 LGKVEEAEAVSEMMLQTWKNPTFGYYTSLLNV----YIDNNLTSKGKDLVEQMGDIGSWA 323
Query: 383 TPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEE 442
P +W + Y ++EKA + + + + RP + ++++ D+
Sbjct: 324 GPLTWDALVRLYIKSGDVEKAHSILLKVARMKRK----RPLYTTCIAVMEHYAKRGDIHN 379
Query: 443 VEAFVSSLK--IKVQKRNMYHALTEAHIRSGQEVDGLLESMKADDI 486
E S++ + + L +A+I + + GL MKAD++
Sbjct: 380 TEKLFQSMRELGYTARFKPFEILVDAYINAKTPIYGLRARMKADNL 425
>gi|78708864|gb|ABB47839.1| expressed protein [Oryza sativa Japonica Group]
gi|215701127|dbj|BAG92551.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 341
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 185/407 (45%), Gaps = 88/407 (21%)
Query: 94 WMSGQ-GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGL 152
WM+ + L S D A +L+LI KV GL+ A YF+S+ D+ K + YG+LL CY
Sbjct: 2 WMTERLHLHLSPGDVANRLELITKVYGLDRAVEYFDSMPDQLKQQQCYGSLLKCYAEANC 61
Query: 153 VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
V+++ L +KM+ MG S ++Y +
Sbjct: 62 VEKAEELFEKMRGMGMASS------------------------------------YAYNV 85
Query: 213 CINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY------- 265
+ Y ++ + ++ Q ME +S I D T T ++A L++K +
Sbjct: 86 MMRLYLQNGQVERVHSMHQAME-ESGIVPDVSTTHT-----LVAVLRKKKTLVAAYVVAE 139
Query: 266 -LKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSL 324
+K E+++ K+ N Y+ +G L
Sbjct: 140 DIKAIENVLEKANSC----------------------------------NSMYMCRIGVL 165
Query: 325 VKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTP 384
+K+ ++ AEK EEWE +D R+ N+++ Y ++G+++KA+A++ + +KKG+ P
Sbjct: 166 LKMNDMVGAEKAYEEWESKHVYHDSRLINLLVDAYCKEGLMDKAEALVDQFIKKGRMPFA 225
Query: 385 NSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVE 444
N+ +A GY + KA + K+ALA + W P + V L++ + ++VE E
Sbjct: 226 NTCYKLAGGYFKVGQVSKAADLTKKALA--SASNEWIPDLTNVLMSLNYFAEQKNVEAAE 283
Query: 445 AFVSSL-KIKVQKRNMYHALTEAHIRSGQEVDGLLESMKADDIDEDK 490
+S L ++ R++YH L + ++ +G+ V LL MK D ++ D+
Sbjct: 284 EMMSLLQRLVTPTRDIYHGLLKTYVNAGKPVSDLLHRMKKDGMEADE 330
>gi|302805546|ref|XP_002984524.1| hypothetical protein SELMODRAFT_423640 [Selaginella moellendorffii]
gi|300147912|gb|EFJ14574.1| hypothetical protein SELMODRAFT_423640 [Selaginella moellendorffii]
Length = 547
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 123/484 (25%), Positives = 229/484 (47%), Gaps = 37/484 (7%)
Query: 34 VARNNLYSRISPLG-DPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVS 92
VA L RIS L D + P++++W+ EG +I+ L V +LR RKRF HAL++S
Sbjct: 55 VAHAELARRISRLKWCQDHLVVPIVEEWMAEGNEITRYGLIIVRHKLRRRKRFHHALRIS 114
Query: 93 EWMSGQGLAFSVHDHAVQL---DLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVR 149
+W++ + +DH L DL+ +V + A F++L + K + Y LL+ YVR
Sbjct: 115 DWIAYKKRVIP-YDHKEALNHIDLVSRV-SVTRAREMFDNLPADWKSREGYTVLLSMYVR 172
Query: 150 EGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFS 209
+ ++ S+ +K G S N ++ LY K+ +++ D +E G + S
Sbjct: 173 HSMAADAESIYTTLKRWG-LRSISPINMMLTLYQKHQVFWKVAELIRDAEEAGQSLNMCS 231
Query: 210 YRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC 269
+ I + ++ ME++++ MES++ +D TY +A+ Y AG+ +KA L
Sbjct: 232 FNILLPMTFRAGGVAEMESLVEMMESKNF--LDEHTYCMLASSYGRAGMVDKAKEMLMVV 289
Query: 270 EDIVSKSKD---ALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVK 326
ED + K YN +I Y +G+ + + + W + DYI M+ S K
Sbjct: 290 EDGMETGKFNRLRRTYNVIIVIYGFIGDVEGVKRIWDITSR--MDPTAEDYICMIRSSAK 347
Query: 327 IGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNS 386
+G E+AE + V N++L + +A+++L++I + G P P +
Sbjct: 348 VGLFEQAESGFLALAAQRKMH-ITVCNVMLQVCQAGNFVLRAESLLRKIHQMGFKPDPAT 406
Query: 387 WSIIAAGYADKNNMEKA---FECMKEALAV-----HEENKFWRPKPSLVSSILDWLGDNR 438
+ + A + +N+++A F+ ++ V +E KF +P I W+G R
Sbjct: 407 YHHLIAIHLKNDNIQRALDLFQLERQVFRVPFELSPQERKFMSTEPR--KDIKPWVGTCR 464
Query: 439 ----------DVEEVEAFVSSLKIKVQKRN--MYHALTEAHIRSGQEVDGLLESMKADDI 486
+V E + +++ K + +++AL A+ + + V G +E ++AD +
Sbjct: 465 MMMLALAERGEVVACETLFRNWRLEKWKTDVRLFNALLRAYEVAREPVAGFMERLEADGV 524
Query: 487 DEDK 490
+ D+
Sbjct: 525 EADE 528
>gi|302782563|ref|XP_002973055.1| hypothetical protein SELMODRAFT_413483 [Selaginella moellendorffii]
gi|300159656|gb|EFJ26276.1| hypothetical protein SELMODRAFT_413483 [Selaginella moellendorffii]
Length = 547
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 123/484 (25%), Positives = 228/484 (47%), Gaps = 37/484 (7%)
Query: 34 VARNNLYSRISPLG-DPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVS 92
VA L RIS L D + P++++W+ EG +I+ L V +LR RKRF HAL++S
Sbjct: 55 VAHAELARRISRLKWCQDHMVVPIVEEWMAEGNEITRYGLIIVRHKLRRRKRFHHALRIS 114
Query: 93 EWMSGQGLAFSVHDHAVQL---DLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVR 149
+W++ + +DH L DL+ +V + A F++L + K + Y LL+ YVR
Sbjct: 115 DWIAYKKRVIP-YDHKEALNHIDLVSRV-SVTRAREMFDNLPADWKSREAYTVLLSMYVR 172
Query: 150 EGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFS 209
+ ++ S+ +K G S N ++ LY K+ +++ D +E G + S
Sbjct: 173 HSMAADAESIYTTLKRWG-LRSISPINMMLTLYQKHQVFWKVAELIRDAEEAGQSLNMCS 231
Query: 210 YRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC 269
+ I + ++ ME++++ MES++ +D TY +A+ Y AG+ +KA L
Sbjct: 232 FNILLPMTFRAGGVAEMESLVEMMESKNF--LDEHTYCMLASSYGRAGMVDKAKEMLMVV 289
Query: 270 EDIVSKSKD---ALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVK 326
ED + K YN +I Y +G+ + + + W + DYI M+ S K
Sbjct: 290 EDGMETGKFNRLRRTYNVIIVIYGFIGDVEGVKRIWDITSR--MDPTAEDYICMIRSSAK 347
Query: 327 IGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNS 386
+G E AE + V N++L + +A+++L++I + G P P +
Sbjct: 348 VGLFELAESGFLALAAQRKMH-ITVCNVMLQVCQAGNFVLRAESLLRKIHQMGFKPDPAT 406
Query: 387 WSIIAAGYADKNNMEKA---FECMKEALAV-----HEENKFWRPKPSLVSSILDWLGDNR 438
+ + A + +N+++A F+ ++ V +E KF +P I W+G R
Sbjct: 407 YHHLIAIHLKNDNIQRALDLFQLERQVFRVPFELSPQERKFMSTEPR--KDIKPWVGTCR 464
Query: 439 ----------DVEEVEAFVSSLKIKVQKRN--MYHALTEAHIRSGQEVDGLLESMKADDI 486
+V E + +++ K + +++AL A+ + + V G +E ++AD +
Sbjct: 465 MVMLALAERGEVVACETLFRNWRLEKWKTDVRLFNALLRAYEVAREPVAGFMERLEADGV 524
Query: 487 DEDK 490
+ D+
Sbjct: 525 EADE 528
>gi|115458674|ref|NP_001052937.1| Os04g0450200 [Oryza sativa Japonica Group]
gi|113564508|dbj|BAF14851.1| Os04g0450200, partial [Oryza sativa Japonica Group]
Length = 292
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 147/278 (52%), Gaps = 2/278 (0%)
Query: 102 FSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQ 161
S +D+ +++DLI +V G +AE +F L + + Y ALL+ Y R + D++ L +
Sbjct: 4 LSENDYGMRIDLITRVFGANAAEDFFEKLPACVQSLEAYTALLHSYARSKMTDKAERLFK 63
Query: 162 KMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARS 221
+MK+ + L YN +M LY + G+ +K+P + ++K PD F+Y + I++ A
Sbjct: 64 RMKDANLSMNILVYNEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYNLRISASAASM 123
Query: 222 ELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALG 281
+L + +L EM + + W Y +A Y+ AG + L + E +S+ ++ +
Sbjct: 124 DLEGFKGILDEMSKDPNSNEGWKLYQNLAVIYVDAGQLVGSGNSLVEAEAKISR-REWIT 182
Query: 282 YNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWE 341
Y+ L+ + LGN+D + W + ++ +R+YI +L S + G+L++A +++++W+
Sbjct: 183 YDFLVILHTGLGNRDRIKDIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKDAGEVIDQWQ 242
Query: 342 LS-CYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
S +D N + + G + A++ + +++K
Sbjct: 243 RSKAPEFDISACNRLFDAFLNAGFTDTANSFRELMLQK 280
>gi|302798913|ref|XP_002981216.1| hypothetical protein SELMODRAFT_53460 [Selaginella moellendorffii]
gi|300151270|gb|EFJ17917.1| hypothetical protein SELMODRAFT_53460 [Selaginella moellendorffii]
Length = 463
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 111/465 (23%), Positives = 212/465 (45%), Gaps = 34/465 (7%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEW-M 95
N+L +R+ D + +L QW+ EG++ S E+ +++L+ RFK A ++S+W +
Sbjct: 8 NSLVARLE--DDKGGPVLHILHQWIAEGRE-SHGEIIAAMKRLKWLGRFKQAYEISDWVI 64
Query: 96 SGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYG-------ALLNCYV 148
+ L LDL G+V + +A+ + + K+ ++Y + YV
Sbjct: 65 KERSLELQKFHFINHLDLTGRVVNMNAAKNFLLT-----KMPRVYAKSEAALITMFENYV 119
Query: 149 REGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNF 208
L+ ++ +++ MKE +A +N + LY N + + IP +L +M++ + P+
Sbjct: 120 IHSLLSKARLVLKLMKEKNLLTTATAFNKLFHLYANKKKEDGIPVILREMRDMRISPNVE 179
Query: 209 SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKK 268
+Y I I + + ME + +M+ + + T+A+ Y+ AG EKA+ YLK+
Sbjct: 180 TYNILIGIKAKKGDTEGMERLFSKMKCDGDGTPNCEILCTLASGYVNAGDHEKAMAYLKE 239
Query: 269 CEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIG 328
+ ++ +I+ YA++G D + + W + N Y+ + + K+G
Sbjct: 240 AVASEEFQESRRVHDKVIALYAAMGRADMIDRIWRFTRRFPVVSAN-SYVATIAAYEKVG 298
Query: 329 ELEEAEKMLEEW--ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPN- 385
++ AEK+ E + + VP + Y + G + KA+ +L E ++ G N
Sbjct: 299 RIDRAEKVFAELTEKRTLLRPAHYVP--LFRAYCEGGEMGKAEKLL-ERIRHGNGHINNL 355
Query: 386 SWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSL--VSSILDWLGDNRDVEEV 443
S+ + AGY N + A E + EE R P V IL N DV
Sbjct: 356 SYHHLVAGYMKSGNPKMAAETLNRMF---EE----RVPPCFDTVMLILKEHAKNADVSSA 408
Query: 444 EAFVSSLKIKVQKRNM--YHALTEAHIRSGQEVDGLLESMKADDI 486
E ++ + +N+ Y++L EA++ +G+ L+ M D +
Sbjct: 409 ELLFQDMRRESYNKNVAAYNSLLEAYVNAGKHAYRFLQRMATDKV 453
>gi|186478941|ref|NP_174121.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332192779|gb|AEE30900.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 388
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 137/275 (49%), Gaps = 18/275 (6%)
Query: 33 PVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVS 92
P +SRI LG +TP LD+W+ G+ ++ L+ +I L +RF HALQVS
Sbjct: 29 PKLNETSHSRIMALGREQKKVTPPLDEWLKRGKDLNPAVLRGLINSLCESQRFNHALQVS 88
Query: 93 EWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCY-VRE 150
EW++ +G+ S D A +L L+ GL+ AE +F S+ + + D ++ LL+ Y + +
Sbjct: 89 EWITKRGIFDLSTEDFASRLCLVEISTGLKEAEKFFKSIPENMRDDSVHTTLLSLYTISK 148
Query: 151 GLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPD-NFS 209
E+ + Q M+ Y ++ LY G+ I ++L MKENGV D N +
Sbjct: 149 KTRHEAEATYQTMRVQNMLLKPYPYYSMIYLYALLGEKNMIDEILRQMKENGVEHDKNLT 208
Query: 210 YRICINSYGARSELSSMENVLQEME-SQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKK 268
+ +Y + ++ +ME L +E + S+ W T ++A Y+ G KA+ L++
Sbjct: 209 ANNVLKAYASLPDVEAMEMFLMGLEVEEPRFSLAWQTGISIAKAYLKGGSSRKAVEMLRR 268
Query: 269 CEDIV-SKSKDALGYNHLISHYASLGNKDEMMKFW 302
E +V +KSKD+ NK MM +W
Sbjct: 269 TELVVDTKSKDS-------------ANKVLMMMYW 290
>gi|414884017|tpg|DAA60031.1| TPA: hypothetical protein ZEAMMB73_016344 [Zea mays]
Length = 703
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 107/443 (24%), Positives = 203/443 (45%), Gaps = 16/443 (3%)
Query: 52 SLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLA-FSVHDHAVQ 110
SL PVLD WV G ++ ++ V+ LR ++ + AL+ EW+ + L F D+A
Sbjct: 261 SLMPVLDGWVKIGNRLERDKVNMVLFHLRKQRMYNKALKFVEWIERRKLLNFEERDYASH 320
Query: 111 LDLIGKVRGLESAETYFNSLNDEDKVDKLYGALL-NCYVREGLVDESLSLMQKMKEMGSF 169
LDLI + G+E+A+ Y + + + + LY LL NC R+ ++ + +++E+
Sbjct: 321 LDLIARNYGVEAAQKYIERVPEAFRSEVLYETLLVNCVCRDD-AQKAEQVFNEIRELSLP 379
Query: 170 GSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENV 229
+ N ++ LY ++ K+ D+L M++ + F+Y++ I+ +++ ME V
Sbjct: 380 LTISACNQMLLLYKRVSRN-KVVDILTLMEKENIKYSIFTYKLMIDLKVRSNDILGMEQV 438
Query: 230 LQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHY 289
L M+ ++ + ++ + VA +YI EKA + E V ++ A+ L+ Y
Sbjct: 439 LNSMK-ENGLEPNFTIQTMVAKFYISGCFTEKAEEVINAMEVHVKANRHAV--RSLLDLY 495
Query: 290 ASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDF 349
A LG ++ + W L C + D++ + + K+G +E AE++ + +
Sbjct: 496 AILGRPVDVERVWNL----CAEPKLEDFLAAIKAWSKLGHIERAEEIFDVLVKTFPKLTS 551
Query: 350 RVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
+ N +L Y++ +++K+ ++ + G T P +W + Y + + KA +
Sbjct: 552 KYFNAMLEVYAENKLLDKSKKFIERMCLDGCTIGPLTWDAVVKLYVNLGELSKADSFL-- 609
Query: 410 ALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK-IKVQKRNMYHALTEAHI 468
+ V E+N P S +L + D+ E +K R + + L A
Sbjct: 610 -MNVTEDNPDRHPLFSSYVILLKAYAEKGDIHNAEKIFDRVKQTNFPARTLPYNLLLAAY 668
Query: 469 RSGQEVD-GLLESMKADDIDEDK 490
S Q G E MKAD K
Sbjct: 669 ASAQVTPYGFRERMKADKFSPGK 691
>gi|302801860|ref|XP_002982686.1| hypothetical protein SELMODRAFT_53462 [Selaginella moellendorffii]
gi|300149785|gb|EFJ16439.1| hypothetical protein SELMODRAFT_53462 [Selaginella moellendorffii]
Length = 463
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 112/467 (23%), Positives = 215/467 (46%), Gaps = 38/467 (8%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEW-M 95
N+L +R+ D + +L QW+ EG++ S E+ +++L+ RFK A ++S+W +
Sbjct: 8 NSLVARLE--DDKGGPVLHILHQWIAEGRE-SHGEIIAAMKRLKWLGRFKQAYEISDWVI 64
Query: 96 SGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYG-------ALLNCYV 148
+ L L+L G+V + +A+ + + K+ ++Y + YV
Sbjct: 65 KERSLELQKFHFINHLELTGRVVNMNAAKNFLLT-----KMPRVYAKSEAALITMFENYV 119
Query: 149 REGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNF 208
L+ ++ +++ MKE +A +N + LY N + + IP +L +M++ + P+
Sbjct: 120 IHSLLSKARLVLKLMKEKNLLTTATAFNKLFHLYANKKKEDGIPVILREMRDMRISPNVE 179
Query: 209 SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKK 268
+Y I I + + ME + +M+ + + T+A+ Y+ AG EKA+ YLK+
Sbjct: 180 TYNILIGIKAKKGDTEGMERLFSKMKCDGDGTPNGEILCTLASGYVNAGDHEKAMAYLKE 239
Query: 269 --CEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVK 326
D +S+ ++ +I+ YA++G D + + W + N Y+ + + K
Sbjct: 240 AVASDEFRESRRV--HDKVIALYAAMGRADMIDRIWRFTRRFPVVSAN-SYVATIAAYEK 296
Query: 327 IGELEEAEKMLEEW--ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTP 384
+G ++ AEK+ E + + VP + Y + G + KA+ +L E ++ G
Sbjct: 297 VGRIDRAEKVFAELTEKRTLLRPAHYVP--LFRAYCEGGEMGKAEKLL-ERIRHGNGHIN 353
Query: 385 N-SWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSL--VSSILDWLGDNRDVE 441
N S+ + AGY N + A E + EE R P V IL N DV
Sbjct: 354 NLSYHHLVAGYMKSGNPKMAAETLTRMF---EE----RVPPCFDTVMLILKEHAKNADVN 406
Query: 442 EVEAFVSSLKIKVQKRNM--YHALTEAHIRSGQEVDGLLESMKADDI 486
E ++ + +N+ Y++L EA++ +G+ L+ M D +
Sbjct: 407 SAELLFQDMRRESYNKNVAAYNSLLEAYVNAGKHAYRFLQRMATDKV 453
>gi|242043362|ref|XP_002459552.1| hypothetical protein SORBIDRAFT_02g006520 [Sorghum bicolor]
gi|241922929|gb|EER96073.1| hypothetical protein SORBIDRAFT_02g006520 [Sorghum bicolor]
Length = 421
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 188/411 (45%), Gaps = 16/411 (3%)
Query: 78 QLRSRKRFKHALQVSEWMSGQGLA-FSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV 136
LR ++ + AL+ EW+ + L F D+A LDL+ + G+E+AE Y + + +
Sbjct: 5 HLRKQRMYNKALKFMEWIDRRKLLNFEERDYASHLDLVARNHGIEAAEKYIERVPEAFRS 64
Query: 137 DKLYGALL-NCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVL 195
+ LY LL NC R+ ++ + +++E+ + N ++ LY ++ K+ D+L
Sbjct: 65 EVLYETLLVNCVCRDD-AQKAEQVFNEIRELSLPLTVSACNQMLLLYKRVSRN-KVVDIL 122
Query: 196 LDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYII 255
M+ + P F+Y++ I+ G ++ ME+VL M+ ++ D+G + VA +YI
Sbjct: 123 KLMENENIKPSLFTYKLMIDLKGRSNDTLGMESVLNLMK-ENGFEPDFGIQTMVAKFYIS 181
Query: 256 AGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR 315
L EKA E V+ ++ A+ L+ YA LG D++ + W L C +
Sbjct: 182 GDLAEKAEEVTNAMEVYVNANRHAI--RSLLDLYAILGRPDDVERIWNL----CTEPKLE 235
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
D++ + + K+G +E AE+ + + + N +L Y++ +++K ++ +
Sbjct: 236 DFLAAIKAWGKLGHIERAEETFDALVKTSPKLTSKYFNAMLYVYAENELLDKGKKFIERM 295
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLG 435
G +P +W + Y + + KA + V E+N P +L
Sbjct: 296 SLDGCPSSPLTWDAVVKLYVNSGELAKADSFLAN---VTEDNPDRYPLFRSYVILLKAFA 352
Query: 436 DNRDVEEVEAFVSSLK-IKVQKRNM-YHALTEAHIRSGQEVDGLLESMKAD 484
+ D+ E + LK R + Y+ L A+ + G E MKAD
Sbjct: 353 EKGDIHNAEKIFNRLKQTSYPARTLPYNLLLAAYANAQVTPYGFRERMKAD 403
>gi|302788498|ref|XP_002976018.1| hypothetical protein SELMODRAFT_415910 [Selaginella moellendorffii]
gi|300156294|gb|EFJ22923.1| hypothetical protein SELMODRAFT_415910 [Selaginella moellendorffii]
Length = 603
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 161/321 (50%), Gaps = 10/321 (3%)
Query: 50 DVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQG--LAFSVHDH 107
D S++ VLD+W EG+ ++ + VI +L++ R HAL++ EW+ + F +
Sbjct: 162 DESMSSVLDKWKEEGKDLTVSMIVTVINRLKNSNRMAHALEMIEWVVDEPDYKDFKLA-R 220
Query: 108 AVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMG 167
+ QL++ + +G+ +AE F L+ E+K +Y ALL YV V ++ L ++M + G
Sbjct: 221 SFQLEITARSKGIAAAEKLFEELSAEEKTRPVYNALLTRYVFLHNVKKAEGLFEEMDKAG 280
Query: 168 SFG-SALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSM 226
S N +M LY + G + K ++L K+ V P+ F+Y + ++ ++ M
Sbjct: 281 FLSQSPFALNLMMKLYKHKGDNAKFQEMLEKAKDVAVEPNIFTYNVMLDLKAKAGDVEGM 340
Query: 227 ENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLI 286
E + +EM+ + D +Y T+ Y+ AGL +KA + L + E + + + +++
Sbjct: 341 EKIFEEMKLNPNAKPDGTSYFTLCKGYLKAGLTDKAEVSLLRME-VGPFRRTKATFEYMM 399
Query: 287 SHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKM---LEEWELS 343
Y LG ++ + W K+ N ++ ++ GE++ + M +++W+ S
Sbjct: 400 LAYGQLGLISDVERMWQKCKMVPGDGFN-SFLAFQRAMALAGEVQRVDSMFKHMDKWKRS 458
Query: 344 CYCYDFRVPNIILLGYSQKGM 364
D + N +LL Y +KGM
Sbjct: 459 -KTVDLKRHNNLLLAYYKKGM 478
>gi|302789381|ref|XP_002976459.1| hypothetical protein SELMODRAFT_416459 [Selaginella moellendorffii]
gi|300156089|gb|EFJ22719.1| hypothetical protein SELMODRAFT_416459 [Selaginella moellendorffii]
Length = 509
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/458 (21%), Positives = 212/458 (46%), Gaps = 38/458 (8%)
Query: 53 LTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQG-LAFSVHDHAVQL 111
+ P + QW+ EG ++ L RV+R+LRSRKR+ AL +W++ + + F H+ +L
Sbjct: 48 VVPAIKQWIREGNSVTSCGLDRVVRRLRSRKRYLQALMAVDWVANEKVIPFGYHETLQRL 107
Query: 112 DLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGS 171
DL + + F L + + + Y LL Y + +++++ MQ+++ +G S
Sbjct: 108 DLCSRCHHVTRTLLLFRRLPKQWRGEDAYCILLEMYYKRDMLEDAEKTMQELRGIG-IKS 166
Query: 172 ALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICI---NSYGARSELSSMEN 228
Y+ ++ Y G + ++ ++K +G+ D Y I + +S+G ++ ++E+
Sbjct: 167 LQPYHLMLSFYKLRGMEMRFERMVTEIKGSGLALDRSFYTILLAARDSFGG--DMVAVED 224
Query: 229 VLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNH---- 284
VL EME + + +D VA Y+ +GL+ K+ L++ E S Y++
Sbjct: 225 VLAEMEGRG-LKLDAVGCLAVAGIYLRSGLRHKSERVLQRLEK--SLKSGEFKYSNSIRR 281
Query: 285 -LISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELS 343
+++ + LG++D + + W + + D+I + + ++G+++EAE M +
Sbjct: 282 RMLAMFGKLGDRDAVDRIWHSIERSASTTVE-DFIFGIEAFGRVGKMDEAEDMY--MRVG 338
Query: 344 CYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEK- 402
C + R+ N L ++G + +A A+++ + + ++ ++ Y ++ +
Sbjct: 339 CNSCNPRLHNAFLAVLVEQGDVIRAVALVERMKGVRCLLSTVTYHLLIKVYLKAGDVSRA 398
Query: 403 --AFECMKEALAVHEENKFW-RPKPSLVSSILDWLGDNRDVEEVEAFVS-------SLKI 452
AFE ++ A E W RP ++ +L++ DV+ E V L
Sbjct: 399 TLAFESLRSAFGKLE----WPRPSSETLAVMLEFFVGTGDVQASERLVKKWMEDGFPLSA 454
Query: 453 KVQKRNMYHALTEAHIRSGQEVDGLLESMKADDIDEDK 490
V +H+L + + G VD M + ++ +
Sbjct: 455 AV-----FHSLVRVYAKGGAGVDNFPGRMLSAGVEPTR 487
>gi|12322983|gb|AAG51473.1|AC069471_4 hypothetical protein [Arabidopsis thaliana]
Length = 349
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 132/262 (50%), Gaps = 18/262 (6%)
Query: 46 LGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGL-AFSV 104
LG +TP LD+W+ G+ ++ L+ +I L +RF HALQVSEW++ +G+ S
Sbjct: 3 LGREQKKVTPPLDEWLKRGKDLNPAVLRGLINSLCESQRFNHALQVSEWITKRGIFDLST 62
Query: 105 HDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCY-VREGLVDESLSLMQKM 163
D A +L L+ GL+ AE +F S+ + + D ++ LL+ Y + + E+ + Q M
Sbjct: 63 EDFASRLCLVEISTGLKEAEKFFKSIPENMRDDSVHTTLLSLYTISKKTRHEAEATYQTM 122
Query: 164 KEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPD-NFSYRICINSYGARSE 222
+ Y ++ LY G+ I ++L MKENGV D N + + +Y + +
Sbjct: 123 RVQNMLLKPYPYYSMIYLYALLGEKNMIDEILRQMKENGVEHDKNLTANNVLKAYASLPD 182
Query: 223 LSSMENVLQEME-SQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIV-SKSKDAL 280
+ +ME L +E + S+ W T ++A Y+ G KA+ L++ E +V +KSKD+
Sbjct: 183 VEAMEMFLMGLEVEEPRFSLAWQTGISIAKAYLKGGSSRKAVEMLRRTELVVDTKSKDS- 241
Query: 281 GYNHLISHYASLGNKDEMMKFW 302
NK MM +W
Sbjct: 242 ------------ANKVLMMMYW 251
>gi|449479164|ref|XP_004155523.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 201
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 101/165 (61%), Gaps = 3/165 (1%)
Query: 286 ISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCY 345
++ YA++GNKDE+ + W L +K+ N Y+ ++ SL+K+ +++ AE++L+EWE
Sbjct: 1 MTLYAAIGNKDEVYRVWNLY-TNLQKRFNSGYLCIISSLMKLDDIDGAERILKEWESGDT 59
Query: 346 CYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
+DF++PN+++ Y KG ++KA+A + +++ GK P +W +A+GY KA E
Sbjct: 60 SFDFKIPNMMINSYCTKGFVDKAEAYISRLIENGKEPRAYAWDRLASGYHSNGLTNKAAE 119
Query: 406 CMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL 450
+K+A++V W+P ++++ L++L N +VE E + L
Sbjct: 120 TLKKAISVSPPR--WKPNYDILAACLEYLKTNGNVELAEEIIGLL 162
>gi|302764000|ref|XP_002965421.1| hypothetical protein SELMODRAFT_406783 [Selaginella moellendorffii]
gi|300166235|gb|EFJ32841.1| hypothetical protein SELMODRAFT_406783 [Selaginella moellendorffii]
Length = 584
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 154/319 (48%), Gaps = 25/319 (7%)
Query: 50 DVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAV 109
D S++ VLD+W EG+ ++ + VI +L++ R HAL++ EW++ +
Sbjct: 162 DESMSSVLDKWKEEGKDLTVSMIVTVINRLKNSNRMAHALEMIEWITARS---------- 211
Query: 110 QLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSF 169
+G+ +AE F L+ E+K +Y ALL YV V ++ L ++M + G
Sbjct: 212 --------KGIAAAEKLFEELSAEEKTRPVYNALLTRYVFLHNVKKAEGLFEEMDKAGFL 263
Query: 170 G-SALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMEN 228
S N +M LY + G + K ++L K+ V P+ F+Y + ++ ++ ME
Sbjct: 264 SQSPFALNLMMKLYKHKGDNAKFQEMLEKAKDVAVEPNIFTYNVMLDLKAKAGDVEGMEK 323
Query: 229 VLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISH 288
+ +EM+ + D +Y T+ Y+ AGL +KA + L + E + + + +++
Sbjct: 324 IFEEMKLNPNAKPDGTSYFTLCKGYLKAGLTDKAEVSLLRME-VGPFRRTKATFEYMMLA 382
Query: 289 YASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKM---LEEWELSCY 345
Y LG ++ + W K+ N ++ ++ GE++ + M +++W+ S
Sbjct: 383 YGQLGLISDVERMWQKCKMVPGDGFN-SFLAFQRAMALAGEVQRVDSMFKHMDKWKRS-K 440
Query: 346 CYDFRVPNIILLGYSQKGM 364
D + N +LL Y +KGM
Sbjct: 441 TVDLKRHNNLLLAYYKKGM 459
>gi|225434953|ref|XP_002281058.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial [Vitis vinifera]
Length = 550
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 105/442 (23%), Positives = 202/442 (45%), Gaps = 11/442 (2%)
Query: 45 PLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSV 104
P G+P V L W+ EG I + I +LR K K AL+V EW+ +
Sbjct: 92 PRGEP-VGLA--FQSWMGEGCPIHRGHIFHAINRLRKLKFNKRALEVMEWVVRERPYRPK 148
Query: 105 H-DHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKM 163
D++ L+ K+ G+ E F+ + E + + LY L+ + +G++ SL+ M+KM
Sbjct: 149 ELDYSYLLEFTTKLHGISQGEKLFSHVPLEFQNELLYNNLVIACLDKGVIRLSLAYMKKM 208
Query: 164 KEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSEL 223
+E+G S L +N ++ L+++ + + IP +L MK + V +Y I + +
Sbjct: 209 RELGHPISYLVFNRLIILHSSPHRRKIIPRILTQMKADKVARHVSTYNILMKIEANEHNI 268
Query: 224 SSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYN 283
+ V EM+ Q + + +Y +A + +A L A Y++ E ++ + +
Sbjct: 269 EGLVKVFGEMK-QQQVEPNEVSYCLLATAHAVAKLYTVAEAYVEAVEKSIT-GNNWSTLD 326
Query: 284 HLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELS 343
LI Y LG ++ + WG+ + + ++ Y+ + + +IG+L AE++ E +
Sbjct: 327 VLIILYGYLGKPTDLERTWGIVQ-ELPHVRSKSYMLAIEAFGRIGQLNRAEELWLEIKSK 385
Query: 344 CYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
N ++ YS+ G I+KA + +E+ G ++ +A G +E+A
Sbjct: 386 KELKSTEQFNSMISVYSKHGFIDKASGLFREMEMNGCKANAITYRNLALGCLKAGLLEEA 445
Query: 404 FECMKEALAVHEENKFWRPKPSLVS--SILDWLGDNRDVEEVEAFVSSLKIKVQKRN--M 459
+ ++ + + + P L + SI++ +N DVE E LK R +
Sbjct: 446 LKTLELGKGLTISTRIRKSIPWLETTLSIVEIFSENGDVENAEKLFEELKTANYTRYTFV 505
Query: 460 YHALTEAHIRSGQEVDGLLESM 481
Y+ L +A++++ LL M
Sbjct: 506 YNTLIKAYVKAKVYDPNLLRRM 527
>gi|297729251|ref|NP_001176989.1| Os12g0531500 [Oryza sativa Japonica Group]
gi|255670362|dbj|BAH95717.1| Os12g0531500 [Oryza sativa Japonica Group]
Length = 352
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 93/178 (52%), Gaps = 3/178 (1%)
Query: 270 EDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGE 329
+D+ +K G ++ SL ++ + + W + +K + +Y ML SL + G+
Sbjct: 112 KDVEDHAKGNHGEKNVDVQSTSLSDRGNLDRVWRKMRETFRKFSDTEYKCMLTSLTRFGD 171
Query: 330 LEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSI 389
+ EAE EWE + D R+PN IL Y + GM+EKA+ L IV+KG P+ ++W +
Sbjct: 172 IAEAESFYSEWESASGTRDSRIPNTILAFYIKNGMMEKAEGFLDHIVQKGVKPSYSTWEL 231
Query: 390 IAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFV 447
GY M+K EC+K+AL+ E+ W P P L ++I + + D+E E +
Sbjct: 232 FVWGYLSDGRMDKVLECLKKALSCLEK---WDPNPQLATAIYSQIEEKGDIEAAEKLL 286
>gi|255584236|ref|XP_002532856.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527393|gb|EEF29534.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/443 (24%), Positives = 202/443 (45%), Gaps = 13/443 (2%)
Query: 45 PLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEW-MSGQGLAFS 103
P G+P + W+ EG I ++ I +LR K K AL+V EW + +
Sbjct: 63 PRGEP---IGLAFQSWMREGFPIHRGDVFHAINRLRKLKLNKRALEVMEWVIRERPYRPK 119
Query: 104 VHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKM 163
D++ L+ K+ G+ E F + E + + LY L+ + +G++ SL M+KM
Sbjct: 120 ELDYSYLLEFTTKLHGISHGEKLFTRIPTEFQNELLYNNLVIACLEKGVIRLSLEYMKKM 179
Query: 164 KEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSEL 223
+E+G S L +N ++ L+++ G+ + IP +L MK + V +Y I + +
Sbjct: 180 RELGHPISHLIFNRLIILHSSPGRRKMIPKILTQMKADKVVRHVSTYNILMKIEANEHNV 239
Query: 224 SSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALG-Y 282
+ V EM+ + + + ++ +A + +A L A Y++ E S + D
Sbjct: 240 EGLIKVFGEMK-RLEVEPNEVSFCILAIAHAVARLYTVAEAYVEAVEK--SYTGDNWSTL 296
Query: 283 NHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWEL 342
+ LI Y L ++ + WG K + ++ YI + + +IG+L AE++ E +
Sbjct: 297 DVLIILYGYLRKGKKLDRIWGTVK-ELPHVRSKSYILAIEAFGRIGQLGRAEELWLEMKS 355
Query: 343 SCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEK 402
N +L Y + G+++KA + +E+ + G P ++ +A G +E+
Sbjct: 356 LKGLKSTEQFNSMLSIYCKCGLVKKATDIFREMDRNGCKPNAITFRHLALGCLKAELVEE 415
Query: 403 AFECMKEALAVHEENKFWRPKPSLVS--SILDWLGDNRDVEEVEAFVSSL-KIKVQKRN- 458
A + ++ + NK P L + SI++ + DV E F L K K +
Sbjct: 416 ALKTLEMGMDFTTSNKIKNSIPWLETTFSIVEIFAEKGDVANAEKFFEELHKAKYARYTF 475
Query: 459 MYHALTEAHIRSGQEVDGLLESM 481
+Y+ L +A++++ V LL M
Sbjct: 476 VYNTLIKAYVKAKVYVPYLLRRM 498
>gi|449474117|ref|XP_004154078.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like, partial [Cucumis sativus]
Length = 263
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 115/212 (54%), Gaps = 4/212 (1%)
Query: 92 SEWMSGQG-LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVRE 150
SEW+ G L F+ D+A ++ LI KV+GL AE+Y + + + ++ ALL YV
Sbjct: 53 SEWLEANGQLEFNERDYASRVHLIAKVQGLHKAESYIAKIPKSFQGEVVHRALLANYVVA 112
Query: 151 GLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSY 210
V+++ + K+K++ S YN ++ LY + KI DVLL M++ + P F+Y
Sbjct: 113 NNVEKAEEVFNKIKDLEFPMSIFAYNQMLVLYKKIDRR-KIADVLLLMEKENIKPCPFTY 171
Query: 211 RICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCE 270
+I I+ G +++S ME V+ M+++ I +D T S +A +Y+ GLK KA LK+ E
Sbjct: 172 KILIDGKGLSNDISGMEQVVDSMKAEG-IELDVSTLSLLAKHYVSCGLKVKAKAILKEIE 230
Query: 271 DIVSKSKDALGYNHLISHYASLGNKDEMMKFW 302
+ S L L+ Y L +DE+ + W
Sbjct: 231 ETNSNGPQWLC-RILLPFYGKLQMEDEVRRLW 261
>gi|302798621|ref|XP_002981070.1| hypothetical protein SELMODRAFT_444770 [Selaginella moellendorffii]
gi|300151124|gb|EFJ17771.1| hypothetical protein SELMODRAFT_444770 [Selaginella moellendorffii]
Length = 1138
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 104/454 (22%), Positives = 213/454 (46%), Gaps = 24/454 (5%)
Query: 38 NLYSRISPLGDPDVS-LTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
+L ++I+ L D + P+L +W EG + + L+ ++ +LR KR AL+V++WM
Sbjct: 78 DLCNKIAALRPRDSGHVVPMLKEWEEEGNVLDKEMLRAIMLKLRKWKRGSLALEVADWMY 137
Query: 97 -GQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDE 155
+ + D +++D+ + + + A+ F L +K Y + + + ++
Sbjct: 138 YTKQFPQDLDDVILRMDMAVRAKKIRRAQKIFKKLQAWEKTTDAYNTMFLIFSQRKMILH 197
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP-DNFSYRICI 214
+ K KE + + ++ + CLY G H K+ + D++ G+ P F + +
Sbjct: 198 ADDFYYKFKEAKLKPNDITFSILACLYRRCGLHNKVVRLQEDIEAAGMKPCVCFLNNLMV 257
Query: 215 NSYGARSELSSMENVLQEME------SQSHISMDWGTYSTVANYYIIAGLKEKA---IIY 265
+ Y +SS E + ++ +SH+S TYS +A Y+ AG+ +KA +
Sbjct: 258 SKYELHG-ISSAEEIFNQLVPAGSDLKRSHLS----TYSMMAASYLSAGMHDKAQNLLEV 312
Query: 266 LKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLV 325
++K D S K Y+ LIS Y+++ N+D M + W +KI+ K +DY+ M+ S
Sbjct: 313 IEKAMDQGSFPKLRRTYHILISMYSTMKNRDGMERVW--KKIEDLKA--QDYVAMIESCG 368
Query: 326 KIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPN 385
+ E+ AEK +E + + +L Y+ KG +KA+ + K++ ++ +
Sbjct: 369 RADEVGSAEKYFKEADRKGLLNQPSLFAALLGVYAGKGQADKAEKLFKKMKEQDVSRDAL 428
Query: 386 SWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLG-DNRDVEEVE 444
+ I + N+++A E ++ A A + RP +L + + DV E
Sbjct: 429 CYHYIILANLNARNIDRAVEILELAEAAGMRDGRSRPFLGTFCDVLKTIARETGDVALAE 488
Query: 445 AFVSSLKIKVQKRNM--YHALTEAHIRSGQEVDG 476
++ + + ++ Y+ L ++++G++V G
Sbjct: 489 TLLADWRKGKYRTDIAVYNHLLRVYLKAGKQVQG 522
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 188/411 (45%), Gaps = 14/411 (3%)
Query: 87 HALQVSEWMS---GQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGAL 143
HAL++++WM+ + + D+ ++DL + + AE F L E + + Y AL
Sbjct: 713 HALEIADWMALSRPRPFTLTTKDNIFRMDLASRCGSVGKAERIFERLAPEHRSEVAYNAL 772
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
L Y ++ + L +++K G+ S + N + +Y ++ + + ++ GV
Sbjct: 773 LLSYTKKKKRGRAERLFKELKATGTISSCYSLNLLASMYRQLRLDAEVLMLAKEAQKLGV 832
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAI 263
D Y + + + L +E + + S + + T +AN Y+ AG +K +
Sbjct: 833 ELDMCFYNLLLPAKFRVQGLEDVEKLYATITSPRDRT-RFFTCLAMANIYVSAGRNDKVL 891
Query: 264 IYLKKCEDIVSKS---KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN-RDYIT 319
L+ + + K YN LIS YASL + + + W +++K ++Q N DY
Sbjct: 892 EMLELIDQGMEAGTIVKQRRRYNVLISMYASLEDGARVERTW--ERLKQQRQPNTEDYCC 949
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDF-RVPNIILLGYSQKGMIEKADAVLKEI-VK 377
++ + K+G + AE + + E + + V N ++ YS GM E+A+ +++ + +
Sbjct: 950 IIRAWGKLGHVVRAETIFQVAEANEKSLKYSTVFNAMMFVYSVAGMREEAEGLVRRMEYE 1009
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDN 437
G P + + YA ++ K ++ A A ++ + + P + + + L+ L D
Sbjct: 1010 LGVKLDPWCYHHLVLLYAKAGDIGKMLSTLRAAQACGKKERRFTPLAATLWAALNTLADA 1069
Query: 438 RDVEEVEAFVSSLKIKVQK--RNMYHALTEAHIRSGQEVDGLLESMKADDI 486
DV+ E ++ K + +Y+ L AH+ + + + +E M AD +
Sbjct: 1070 GDVDTAEETLTRWKRSGYRVTTGLYNRLLRAHLVAARPTERFVERMLADGV 1120
>gi|302801578|ref|XP_002982545.1| hypothetical protein SELMODRAFT_421999 [Selaginella moellendorffii]
gi|300149644|gb|EFJ16298.1| hypothetical protein SELMODRAFT_421999 [Selaginella moellendorffii]
Length = 1138
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 104/454 (22%), Positives = 213/454 (46%), Gaps = 24/454 (5%)
Query: 38 NLYSRISPLGDPDVS-LTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
+L ++I+ L D + P+L +W EG + + L+ ++ +LR KR AL+V++WM
Sbjct: 78 DLCNKIAALRPRDSGHVVPMLKEWEEEGNVLDKEMLRAIMLKLRKWKRGSLALEVADWMY 137
Query: 97 -GQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDE 155
+ + D +++D+ + + + A+ F L +K Y + + + ++
Sbjct: 138 YTKQFPQDLDDVILRMDMAVRAKKIRRAQKIFKKLQAWEKTTDAYNTMFLIFSQRKMILH 197
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP-DNFSYRICI 214
+ K KE + + ++ + CLY G H K+ + D++ G+ P F + +
Sbjct: 198 ADDFYYKFKEAKLKPNDITFSILACLYRRCGLHNKVVRLQEDIEAAGMKPCVCFLNNLMV 257
Query: 215 NSYGARSELSSMENVLQEME------SQSHISMDWGTYSTVANYYIIAGLKEKA---IIY 265
+ Y +SS E + ++ +SH+S TYS +A Y+ AG+ +KA +
Sbjct: 258 SKYELHG-ISSAEEIFNQLVPAGSDLKRSHLS----TYSMMAASYLSAGMHDKAQNLLEV 312
Query: 266 LKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLV 325
++K D S K Y+ LIS Y+++ N+D M + W +KI+ K +DY+ M+ S
Sbjct: 313 IEKAMDQGSFPKLRRTYHILISMYSTMKNRDGMERVW--KKIEDLKA--QDYVAMIESCG 368
Query: 326 KIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPN 385
+ E+ AEK +E + + +L Y+ KG +KA+ + K++ ++ +
Sbjct: 369 RADEVGSAEKYFKEADRKGLLNQPSLFAALLGVYAGKGQADKAEKLFKKMKEQDVSRDAL 428
Query: 386 SWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLG-DNRDVEEVE 444
+ I + N+++A E ++ A A + RP +L + + DV E
Sbjct: 429 CYHYIILANLNAKNIDRAVEILELAEAAGMRDGRSRPFLGTFCDVLKTIAKETGDVALAE 488
Query: 445 AFVSSLKIKVQKRNM--YHALTEAHIRSGQEVDG 476
++ + + ++ Y+ L ++++G++V G
Sbjct: 489 TLLADWRKGKYRTDIAVYNHLLRVYLKAGKQVQG 522
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 188/411 (45%), Gaps = 14/411 (3%)
Query: 87 HALQVSEWMS---GQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGAL 143
HAL++++WM+ + + D+ ++DL + + AE F L E + + Y AL
Sbjct: 713 HALEIADWMALSRPRPFTLTTKDNIFRMDLASRCGSVGKAERIFERLAPEHRSEVAYNAL 772
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
L Y ++ + L +++K G+ S + N + +Y G ++ + + ++ GV
Sbjct: 773 LLSYTKKKKRGRAERLFKELKATGTISSCYSLNLLASMYRQLGLDAEVLMLAKEAQKLGV 832
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAI 263
D Y + + + L +E + + S + + T +AN Y+ AG +K +
Sbjct: 833 ELDMCFYNLLLPAKFRVQGLEEVEKLYATITSPRDRT-RFFTCLAMANIYVSAGRNDKVL 891
Query: 264 IYLKKCEDIVSKS---KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN-RDYIT 319
L+ + + K YN LIS YASL + + + W +++K ++Q N DY
Sbjct: 892 EMLELIDQGMEAGTIVKQRRRYNVLISMYASLEDGARVERTW--ERLKQQRQPNTEDYCC 949
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFR-VPNIILLGYSQKGMIEKADAVLKEI-VK 377
++ + K+G + AE + + E + + V N ++ YS GM E+A+ +++ + +
Sbjct: 950 IIRAWGKLGHVVRAETIFQVAEANEKSLKYSTVFNAMMFVYSVAGMREEAEGLVQRMEYE 1009
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDN 437
G P + + YA ++ K ++ A A ++ + + P + + + L+ L D
Sbjct: 1010 LGVKLDPWCYHHLVLLYAKAGDIGKMLSTLRAAQAGGKKERRFTPLAATLWAALNTLADA 1069
Query: 438 RDVEEVEAFVSSLKIKVQK--RNMYHALTEAHIRSGQEVDGLLESMKADDI 486
DV+ E ++ K + +Y+ L AH+ + + + +E M D +
Sbjct: 1070 GDVDTAEETLTRWKRSGYRVTTGLYNRLLRAHLVAARPTERFVERMLVDGV 1120
>gi|449450908|ref|XP_004143204.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Cucumis sativus]
gi|449517541|ref|XP_004165804.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Cucumis sativus]
Length = 527
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 197/429 (45%), Gaps = 11/429 (2%)
Query: 60 WVLEGQKISELELQRVIRQLRSRKRFKHALQVSEW-MSGQGLAFSVHDHAVQLDLIGKVR 118
W+ +G I ++ I +LR +R K AL+V EW + + + D++ L+ K
Sbjct: 80 WMGDGFPIHRGDIFHAINRLRKLERNKRALEVMEWVIREKPYRINELDYSYLLEFTIKHH 139
Query: 119 GLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGI 178
G+ E F+++ E + + L+ L+ + +G + SL+ M+KM+E+G S L +N +
Sbjct: 140 GISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAYMRKMREVGHSISHLVFNRL 199
Query: 179 MCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSH 238
+ L+++ + + IP +L MK + VP +Y I + + + V +M ++
Sbjct: 200 IILHSSFRRRKIIPKILSQMKADKVPLHVSTYNILMKIEANEHNIEGLMRVFSDMR-RAK 258
Query: 239 ISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEM 298
+ + +Y VA + +A L Y++ E ++ + + Y+ LI Y L + E+
Sbjct: 259 VEPNEVSYCIVATAHAVAKLYTVVEAYVEALEKSIAGNNWS-TYDVLIILYGYLNKEKEL 317
Query: 299 MKFWGLQKIKCKKQL-NRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL 357
+ WG+ I+ + ++ +I + + +IG L AE++ E + N IL
Sbjct: 318 ERTWGI--IQGFPHIPSKSFILAIEAFGRIGLLSRAEELWLEMKTKRGIKATDQFNSILS 375
Query: 358 GYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEEN 417
Y + G+I+KA + ++I G P ++ +A G +E+A + +
Sbjct: 376 VYCRHGLIKKATEIFRKIEANGCKPNAITFRHLAFGCLKAGLVEEALKTLDLGSNTTSST 435
Query: 418 KFWR---PKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRN--MYHALTEAHIRSGQ 472
K R P S+++ L + D+E E LK R +Y+ L +A++++
Sbjct: 436 KIVRKSTPWLETTLSMIEILAERGDIENTEKLFKELKEAKYTRYTFVYNTLIKAYVKAKI 495
Query: 473 EVDGLLESM 481
LL M
Sbjct: 496 HNPNLLRRM 504
>gi|115471209|ref|NP_001059203.1| Os07g0222700 [Oryza sativa Japonica Group]
gi|34394024|dbj|BAC84055.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113610739|dbj|BAF21117.1| Os07g0222700 [Oryza sativa Japonica Group]
gi|117380751|gb|ABK34463.1| DNA-binding protein [Oryza sativa Japonica Group]
Length = 411
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 168/355 (47%), Gaps = 12/355 (3%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
LY L+ V G + ++ + +++K++ + N ++ LY K+ VL+ M
Sbjct: 48 LYETLIVNCVLAGDIQKAEEVFKEIKDLCLRLTVTLCNQMILLYKRIAPG-KVASVLMLM 106
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
++ V P F+YR+ I+ G ++L+ +E VL EM++ I T + VA +YI GL
Sbjct: 107 EKENVKPSAFTYRLLIDLKGRSNDLAGIEVVLNEMKAYG-IEPSTSTQTMVARFYIHGGL 165
Query: 259 KEKAIIYLKKCEDIVSKSKDALGY-NHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
EKA +K+ E +S SKD L+ YA+L +++ + W + C + + D+
Sbjct: 166 TEKAEAVVKEMEAQLSNSKDGRHVIKSLLHLYAALNKPNDVARIWEM----CTEPMLEDF 221
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
++ + + ++G +E+AE+ E + + N +L Y+Q ++ K ++ + +
Sbjct: 222 LSAIKAWGELGLIEKAEETFEAMANAPEKLSSKYYNAMLNVYAQNKLLSKGKQFVERMCR 281
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDN 437
G P +W + Y + +EKA + L V EEN +P + ++
Sbjct: 282 DGCPNGPLTWDALINLYVNSGEVEKADSFL---LNVAEENPDRKPLFTSYFFLMKGYAKR 338
Query: 438 RDVEEVEAFVSSLK-IKVQKRNMYHA-LTEAHIRSGQEVDGLLESMKADDIDEDK 490
D+ E LK + R +++A L EA++ + G LE M+ D++ K
Sbjct: 339 GDIHNTEKIFDRLKNVGYAPRPLHYAVLLEAYVNAKVPAHGFLERMRGDNVRPTK 393
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 115 GKVRGLESAETYFNSL-NDEDKVD-KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
G++ +E AE F ++ N +K+ K Y A+LN Y + L+ + +++M G
Sbjct: 229 GELGLIEKAEETFEAMANAPEKLSSKYYNAMLNVYAQNKLLSKGKQFVERMCRDGCPNGP 288
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDN----FSYRICINSYGARSELSSMEN 228
L ++ ++ LY N+G+ EK LL++ E PD SY + Y R ++ + E
Sbjct: 289 LTWDALINLYVNSGEVEKADSFLLNVAEEN--PDRKPLFTSYFFLMKGYAKRGDIHNTEK 346
Query: 229 VLQEMESQSH 238
+ +++ +
Sbjct: 347 IFDRLKNVGY 356
>gi|449457829|ref|XP_004146650.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 222
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 126/261 (48%), Gaps = 58/261 (22%)
Query: 14 RNFTKTNLEIFTRAY-RAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELEL 72
++ NL F R + V +++LY RISP+GDP++S+TP+LDQWVLE + + EL
Sbjct: 5 QSLKPINLIAFRREFVNFYSTVVKDSLYRRISPVGDPNISVTPLLDQWVLESGLVQQDEL 64
Query: 73 QRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLND 132
+ +I++LR KRFKHAL+V E YFN++
Sbjct: 65 RHIIKELRVYKRFKHALEV--------------------------------EDYFNNMPS 92
Query: 133 EDKVDKLYGALLNCYVREGLVDESLSLMQKMKEM--------GSFGSALNY-NGIMCLYT 183
+ K +++ ALLNCY E D++ +++QK+KEM S LNY I+ +
Sbjct: 93 QLKRCQVHIALLNCYAHEKYADKANAVLQKIKEMVETLKKAASLCPSELNYAKEILAAFL 152
Query: 184 NTGQH----EKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHI 239
+ Q EK+ ++L + ++ DN +++ E + +E E+Q +
Sbjct: 153 DGKQDEEETEKVVNLLREKDDSHPARDNMP-----------NDIKGAERIYKEWETQK-L 200
Query: 240 SMDWGTYSTVANYYIIAGLKE 260
S D + + + Y AGL E
Sbjct: 201 SYDLRIPNLLVDAYCRAGLME 221
>gi|224106481|ref|XP_002314181.1| predicted protein [Populus trichocarpa]
gi|222850589|gb|EEE88136.1| predicted protein [Populus trichocarpa]
Length = 525
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 107/458 (23%), Positives = 206/458 (44%), Gaps = 9/458 (1%)
Query: 29 RAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHA 88
+++ P L SRI L + S+ W+ EG I ++ I +LR + K A
Sbjct: 49 KSLDPEGPKCLSSRIEKLPRGE-SVGYAFQSWMGEGFPIHRGDVFHTINRLRKLRLNKRA 107
Query: 89 LQVSEWMSGQ-GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCY 147
L+V EW+ + D++ L+ K G+ E F + E + + LY L+
Sbjct: 108 LEVMEWVVRERPYRLKELDYSYLLEFTTKHHGISHGEKLFLHVPSEFQNELLYNNLVISC 167
Query: 148 VREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDN 207
+ +G++ SL M+KM+E G S L +N ++ L+++ G + IP +L M+ + V P
Sbjct: 168 LEKGVIRLSLDYMKKMREQGHPISYLIFNRLIILHSSPGSRKMIPKILAQMRADKVVPHV 227
Query: 208 FSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLK 267
+Y I + + + V +M+ + + + ++ +A + A L A Y++
Sbjct: 228 STYNILMKIEANEHNIDGLVKVFNDMK-RFKVEPNEVSFCILATAHAAARLYTVAEAYVE 286
Query: 268 KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKI 327
E S + + LI Y LG + E+ + WG+ ++ ++ Y+ + + KI
Sbjct: 287 AVEKSCS-GDNWSTLDVLIILYGHLGKEKELERTWGIV-LELPHVRSKSYMLAIEAYGKI 344
Query: 328 GELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSW 387
G+L AE++ E + N +L Y + G+I+KA +E+ G ++
Sbjct: 345 GQLSRAEELWLEMKSIHGLRSTEQFNSMLSVYCKHGLIKKATGNFREMEINGCKANSITF 404
Query: 388 SIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVS--SILDWLGDNRDVEEVEA 445
+A G N +E+A + ++ + N+ P L + SI++ + DV VE
Sbjct: 405 RHLALGCLKANLVEEALKTLEMGKNLTTSNRVKNSTPWLETTLSIIELFAEKGDVVNVEK 464
Query: 446 FVSSL-KIK-VQKRNMYHALTEAHIRSGQEVDGLLESM 481
L K K ++ +++ L +A++++ LL M
Sbjct: 465 LFEELAKAKYIRHTFVFNILIKAYVKAKIYSPNLLRRM 502
>gi|356557435|ref|XP_003547021.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Glycine max]
Length = 507
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 101/451 (22%), Positives = 207/451 (45%), Gaps = 11/451 (2%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEW-M 95
++L RI L + S+ W+ +G + ++ I +LR K ALQV EW +
Sbjct: 39 DSLSRRIEKLPKGE-SVGSAFRSWMRDGLPVHGGDIFHAINRLRKLNMNKRALQVMEWVI 97
Query: 96 SGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDE 155
+ D++ ++ K+ G+ E F+ + E + + LY L+ + +G++
Sbjct: 98 RERPYRPRELDYSYLVEFTTKLHGISHGEKLFSRIPVEFQSELLYNNLVIACLDKGVIKL 157
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
SL M+KM+E+G S L +N ++ L+++ G+ + IP +L MK + V P +Y I +
Sbjct: 158 SLEYMKKMRELGFPISHLVFNRLIILHSSPGRRKMIPKLLTQMKADKVTPHVSTYNILMK 217
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK 275
L ++ V M+ + + + +Y +A + +A L Y++ E ++
Sbjct: 218 IEANEHNLENLVKVFGRMKV-AQVEPNEISYCILAIAHAVARLYTATEAYVEAVEKSITG 276
Query: 276 SKDALGYNHLISHYASLGNKDEMMKFWG-LQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
+ + + L+ Y LGN+ E+ + W +Q++ + ++ Y+ + + +IG+L AE
Sbjct: 277 NNWS-TLDVLLMLYGYLGNQKELERVWATIQELPSIR--SKSYMLAIEAFGRIGQLNRAE 333
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGY 394
++ E + + N ++ Y + G I++A + K + G P ++ +A G
Sbjct: 334 EIWLEMKSTKGLKSVEQFNSMMSVYCKHGFIDRAAKLYKNMKASGCKPNAITYHQLALGC 393
Query: 395 ADKNNMEKAFECMKEALAVHEENKFWRPKPSLVS--SILDWLGDNRDVEEVEAFVSSL-K 451
E+A + + L + + P L + SI++ + DV VE K
Sbjct: 394 LKSGMAEQALKTLDLGLRLTISKRVRNSTPWLETTLSIVEIFAEKGDVGNVERLFEEFHK 453
Query: 452 IKVQKRN-MYHALTEAHIRSGQEVDGLLESM 481
K + +Y+ L +A++++ LL+ M
Sbjct: 454 AKYCRYTFVYNTLIKAYVKAKIYNPNLLKRM 484
>gi|302753488|ref|XP_002960168.1| hypothetical protein SELMODRAFT_402234 [Selaginella moellendorffii]
gi|300171107|gb|EFJ37707.1| hypothetical protein SELMODRAFT_402234 [Selaginella moellendorffii]
Length = 585
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 192/417 (46%), Gaps = 27/417 (6%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+IR+L R+++K AL + D+ +Q+D V + AE FN L D+
Sbjct: 94 IIRKLTKRQKYKTALD-------KAFEIDDRDYVLQVDYYAHV-DMYLAEMAFNRLPDDK 145
Query: 135 KVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDV 194
K ++ Y +L +VR ++++++ +M K++E+G SA + + L+ G +IP +
Sbjct: 146 KTEEAYNYILAGFVRNRMLEKAVVVMDKIRELG-LVSAFSLEQMTLLFHYLGLERRIPAL 204
Query: 195 LLDMKENGV--PPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
+++ + G+ P + + I +LS ME +++E+E S W TY +A+
Sbjct: 205 VVEARSLGLHFHPHFLNTHLWIKR--RHGDLSGMEEIVEELELMGR-SNAW-TYIFIASA 260
Query: 253 YIIAGLKEKAIIYLKKCEDIVSKS---KDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
YI AGL EKA L E + K YN ++ Y L + + + + WG+ +
Sbjct: 261 YIQAGLPEKAHAALGAAEAGIRNGRFKKQRKVYNKILLLYGLLKDTEGIERVWGILNSRP 320
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCY--DFRVPNIILLGYSQKGMIEK 367
++ +++ M+ +L G + AE++ EE C ++R ++ Y++ G+++K
Sbjct: 321 LVAVH-NHLFMIEALGSAGNIGRAEEIFEELR-KCRGVRKEYRQFIVMAGAYTKNGLMDK 378
Query: 368 ADAVLKEIVKKGKT-PTPNSWSIIAAGYADKNNMEKAFECMKE--ALAVHEENKFWRPKP 424
A VL + K K P P + GY +N + A E +E +L + K W
Sbjct: 379 ATEVLYDYPAKYKARPVPELYHYFIKGYIKRNEKDWAIEAYEEGQSLVRYRSTKLWYETM 438
Query: 425 SLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNMYHALTEAHIRSGQEVDGLLESM 481
V SI GD + F K + M+ L + ++ + + GL++ M
Sbjct: 439 LEVMSIYAERGDV--TSALAMFKHCKACKHRDIRMFTLLFKTYVVAKEPAHGLIKRM 493
>gi|302804432|ref|XP_002983968.1| hypothetical protein SELMODRAFT_423071 [Selaginella moellendorffii]
gi|300148320|gb|EFJ14980.1| hypothetical protein SELMODRAFT_423071 [Selaginella moellendorffii]
Length = 598
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 191/417 (45%), Gaps = 27/417 (6%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+IR+L R+++K AL + D+ +Q+D V + AE FN L D+
Sbjct: 107 IIRKLTKRQKYKTALD-------KAFEIDDRDYVLQVDYYAHV-DMYLAEMAFNRLPDDK 158
Query: 135 KVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDV 194
K ++ Y +L YVR ++++++ +M K++E+G SA + + L+ G +IP +
Sbjct: 159 KTEEAYNYILAGYVRNRMLEKAVVVMDKIRELG-LVSAFSLEQMTLLFHYLGLERRIPAL 217
Query: 195 LLDMKENGV--PPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
+++ + G+ P + + I +LS ME +++E+E S W TY +A+
Sbjct: 218 VVEARSLGLHFHPHFLNTHLWIKR--RHGDLSGMEEIVEELELMGR-SNAW-TYIFIASA 273
Query: 253 YIIAGLKEKAIIYLKKCEDIVSKS---KDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
YI AG EKA L E + K YN ++ Y L + + + + WG+ +
Sbjct: 274 YIQAGFPEKAHAALGAAEAGIRNGRFKKQRKVYNKILLLYGLLKDMEGIERVWGILNSRP 333
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCY--DFRVPNIILLGYSQKGMIEK 367
++ +++ M+ +L G + AE++ EE C ++R ++ Y++ G+++K
Sbjct: 334 LVAVH-NHLFMIEALGSAGNIGRAEEIFEELR-KCRGVRKEYRQFIVMAGAYTKNGLMDK 391
Query: 368 ADAVLKEIVKKGKT-PTPNSWSIIAAGYADKNNMEKAFECMKE--ALAVHEENKFWRPKP 424
A VL + K K P P + GY +N + A E +E +L + K W
Sbjct: 392 ATEVLYDYPAKYKARPVPELYHYFIKGYIKRNEKDWAIEAYEEGQSLVRYRSTKLWYETM 451
Query: 425 SLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNMYHALTEAHIRSGQEVDGLLESM 481
V SI GD + F K + M+ L + ++ + + GL++ M
Sbjct: 452 LEVMSIYAERGDV--TSALAMFKHCKACKHRDIRMFTLLFKTYVVAKEPAHGLIKRM 506
>gi|449457827|ref|XP_004146649.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 204
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 106/190 (55%), Gaps = 10/190 (5%)
Query: 266 LKKCEDIVSK-SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSL 324
LKK E +++ K +N + YA G KDE+ + W L K +K N+ +I+M+ SL
Sbjct: 2 LKKSEGLLANVKKKGFAFNVYLKLYARNGKKDEIHRIWNLYK--KEKIFNKGFISMITSL 59
Query: 325 VKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTP 384
+ +++ AE++ +EWE YD R+PN+++ Y + G++EKA+ +L E+V + +
Sbjct: 60 FVLDDIKGAERIYKEWETQKLSYDLRIPNLLVDAYCRAGLMEKAEVLLNEMVIVRRKFSV 119
Query: 385 NSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSIL-DWLGDNRDVEEV 443
SW +A+GY K+ + +A E +K A +V + + V IL +L +DVEE
Sbjct: 120 ESWCYLASGYLQKDQLPQAVETLKLAASVCP------SRLNYVKEILAAFLDGKQDVEET 173
Query: 444 EAFVSSLKIK 453
E V+ L+ K
Sbjct: 174 EKVVNLLREK 183
>gi|356547249|ref|XP_003542028.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Glycine max]
Length = 507
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 97/450 (21%), Positives = 202/450 (44%), Gaps = 9/450 (2%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEW-M 95
++L RI L + S+ W+ +G + +++ + +LR K ALQV EW +
Sbjct: 39 DSLSRRIERLPKGE-SVGAAFCSWMRDGLPVHGVDVFHAVNRLRKLNMNKRALQVMEWVI 97
Query: 96 SGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDE 155
+ D++ ++ K+ G+ E F+ + E + + LY L+ + +G++
Sbjct: 98 RERPYRPKELDYSYLVEFTTKLHGISHGEKLFSRIPVEFQNELLYNNLVIACLDKGVIKL 157
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
SL M+KM+E+G S L +N ++ L+++ G+ + IP +L MK + V P +Y I +
Sbjct: 158 SLEYMKKMRELGFLISHLVFNRLIILHSSPGRRKMIPKLLTQMKADKVTPHVSTYNILMK 217
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK 275
L ++ M+ + ++ + +Y +A + +A L Y++ E ++
Sbjct: 218 IEANEHNLENLVKFFSRMKV-AQVAPNEISYCILAIAHAVARLYTATEAYVEAVEKSITG 276
Query: 276 SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEK 335
+ + + L+ Y LGN+ E+ + W + + ++ Y+ + + +IG+L +AE+
Sbjct: 277 NNWS-TLDVLLMLYGYLGNQKELERVWATIR-ELPSVRSKSYMLAIEAFGRIGQLNQAEE 334
Query: 336 MLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYA 395
+ E E + N ++ Y + G I KA + K + G P ++ +A G
Sbjct: 335 LWLEMESTKGLKSVEQFNSMMSVYCKHGFIGKAAKLYKNMKASGCKPNAITYRQLALGCL 394
Query: 396 DKNNMEKAFECMKEALAVHEENKFWRPKPSLVS--SILDWLGDNRDVEEVEAFVSSLKIK 453
E+ + + L + + P L + SI++ + D+ VE
Sbjct: 395 KSGMAEQGLKTLDLGLRLTISKRVRNSIPWLETTLSIVEIFAEKGDMGNVERLFEEFHKS 454
Query: 454 VQKRN--MYHALTEAHIRSGQEVDGLLESM 481
R +Y+ L +A++++ LL+ M
Sbjct: 455 KYCRYTFVYNTLIKAYVKAKIYDPNLLKRM 484
>gi|15217608|ref|NP_171708.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806399|sp|O81908.2|PPR2_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g02060, chloroplastic; Flags: Precursor
gi|332189251|gb|AEE27372.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 179/418 (42%), Gaps = 29/418 (6%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
V++ LR K L+ +W+S +G + + L+ +G+ R L A + S+
Sbjct: 71 VLQTLRLIKVPADGLRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRS 130
Query: 135 K-----VDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHE 189
D+ + +L+ Y GL ES+ L Q MK+MG S L +N ++ + G+
Sbjct: 131 NGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTG 190
Query: 190 KIPDVLLDMKEN-GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYST 248
D+ +M+ GV PD++++ IN + S + + ++ME H + D TY+T
Sbjct: 191 MAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDME-LYHCNPDVVTYNT 249
Query: 249 VANYYIIAGLKEKA--II--YLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGL 304
+ + AG + A ++ LKK D+ + + Y L+ Y DE + +
Sbjct: 250 IIDGLCRAGKVKIAHNVLSGMLKKATDV---HPNVVSYTTLVRGYCMKQEIDEAVLVFHD 306
Query: 305 QKIKCKKQLNRDYITMLGSLVKIGELEEAEKML--EEWELSCYCYDFRVPNIILLGYSQK 362
+ K Y T++ L + +E + +L + + D NI++ +
Sbjct: 307 MLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDA 366
Query: 363 GMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA-------FECMKEALAVHE 415
G ++ A V +E++ P S+S++ +N ++A FE KE L +
Sbjct: 367 GHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFE--KEVLLGKD 424
Query: 416 ENKFWRPKPSLVSSILDWLGDNRDVEEVE-AFVSSLKIKVQKRNMYHALTEAHIRSGQ 472
E K P + + + ++L N ++ E F +K VQ Y L H R G+
Sbjct: 425 ECK---PLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSYKTLITGHCREGK 479
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 52/273 (19%), Positives = 113/273 (41%), Gaps = 10/273 (3%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+ Y + +DE++ + M G +A+ YN ++ + ++++I D+L+
Sbjct: 284 YTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGN 343
Query: 200 E--NGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
+ PD ++ I I ++ L + V QEM + + D +YS + +
Sbjct: 344 DAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMK-LHPDSASYSVLIRTLCMRN 402
Query: 258 LKEKA-IIYLKKCEDIVSKSKD-----ALGYNHLISHYASLGNKDEMMKFWGLQKIKCKK 311
++A ++ + E V KD A YN + + + G + K + Q +K
Sbjct: 403 EFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFR-QLMKRGV 461
Query: 312 QLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAV 371
Q Y T++ + G+ + A ++L + D +++ G + G A
Sbjct: 462 QDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDT 521
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
L+ +++ P ++ + A A + ++F
Sbjct: 522 LQRMLRSSYLPVATTFHSVLAELAKRKFANESF 554
>gi|388512893|gb|AFK44508.1| unknown [Medicago truncatula]
Length = 244
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 105/194 (54%), Gaps = 2/194 (1%)
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
L EKA LKK E + +D + +++L+S Y S+GNKDE+ + W K N Y
Sbjct: 3 LFEKAQECLKKAEGRI-LGRDKVPFHYLLSLYGSVGNKDEVYRVWNNYKSMFPSIPNLGY 61
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
++ SLV++ ++E AEK+ EEW D R+ N+++ Y +KG +K + K + +
Sbjct: 62 HAIISSLVRMDDIEGAEKLYEEWVSVRPSDDSRIGNLLISWYLKKGKSDKVFSFFKHMSE 121
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDN 437
G P +W +++ G+ + + +A C+++A + ++K W+PKP +++ L D
Sbjct: 122 GGGCPNSTTWELLSEGHIAEKRVSEALSCLEKAF-MTSDSKSWKPKPIKLAAFLKLCQDE 180
Query: 438 RDVEEVEAFVSSLK 451
D+E + + L+
Sbjct: 181 DDMESAKVLIELLR 194
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 179/406 (44%), Gaps = 17/406 (4%)
Query: 27 AYRAVKPVARNNLYSRISP---LGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRK 83
+Y + P + L S I P G D L+ + + + + + S EL ++ L K
Sbjct: 91 SYHGLSPQGQQVLRSLIEPNFDSGQLDALLSELFEPFKDKPESTSS-ELLAFLKGLGFHK 149
Query: 84 RFKHALQVSEWMSGQGLAFSVHDH---AVQLDLIGKVRGLESAETYFNSLNDEDKVDKLY 140
+F AL +W Q S+ D+ A+ + ++GK + SA FN L ++ +Y
Sbjct: 150 KFDLALCAFDWFMKQKDYQSMLDNSVIAIVISMLGKEGRVSSAANLFNGLQEDGFSLDVY 209
Query: 141 G--ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQH-EKIPDVLLD 197
+L++ + G E++++ +KM+E G + + YN I+ ++ G KI ++
Sbjct: 210 SYTSLISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKMGTPWNKITSLVEK 269
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
MK +G+ PD ++Y I S V +EM++ + S D TY+ + + Y +
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKA-AGFSHDKVTYNALLDVYGKSH 328
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
++A+ L + E + S + YN LIS YA G DE M+ K K Y
Sbjct: 329 RPKEAMKVLNEME-LNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTY 387
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
T+L + G++E A + EE + + N + Y +G + EI
Sbjct: 388 TTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINV 447
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEK----AFECMKEALAVHEENKF 419
G +P +W+ + A + +N M+ F+ MK A V E F
Sbjct: 448 CGLSPDIVTWNTLLAVFG-QNGMDSEVSGVFKEMKRAGFVPERETF 492
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 134/318 (42%), Gaps = 10/318 (3%)
Query: 30 AVKP--VARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKH 87
KP + N + + +G P +T ++++ +G +I + +
Sbjct: 238 GCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQE 297
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNS--LNDEDKVDKLYGALLN 145
A QV E M G + + LD+ GK + A N LN Y +L++
Sbjct: 298 AAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLIS 357
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
Y R+G++DE++ L +M E G+ Y ++ + G+ E ++ +M+ G P
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKP 417
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
+ ++ I YG R + M + E+ + +S D T++T+ + G+ +
Sbjct: 418 NICTFNAFIKMYGNRGKFVDMMKIFDEI-NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGV 476
Query: 266 LK--KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGS 323
K K V + + +N LIS Y+ G+ ++ M + Y T+L +
Sbjct: 477 FKEMKRAGFVPERET---FNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAA 533
Query: 324 LVKIGELEEAEKMLEEWE 341
L + G E++EK+L E E
Sbjct: 534 LARGGMWEQSEKVLAEME 551
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 157/347 (45%), Gaps = 23/347 (6%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I + R++ A+ V + M +G ++ + V L++ GK + + SL ++
Sbjct: 214 LISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGK---MGTPWNKITSLVEKM 270
Query: 135 KVDKL------YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQH 188
K D + Y L+ C R L E+ + ++MK G + YN ++ +Y + +
Sbjct: 271 KSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRP 330
Query: 189 EKIPDVLLDMKENGVPPDNFSYRICINSY---GARSELSSMENVLQEMESQSHISMDWGT 245
++ VL +M+ NG P +Y I++Y G E ++N + E ++ D T
Sbjct: 331 KEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKP----DVFT 386
Query: 246 YSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQ 305
Y+T+ + + AG E A+ ++ + K + +N I Y + G +MMK +
Sbjct: 387 YTTLLSGFERAGKVESAMNIFEEMRNAGCKP-NICTFNAFIKMYGNRGKFVDMMKIFDEI 445
Query: 306 KIKCKKQLNRDYIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQK 362
+ C L+ D +T +L + G E + +E + + + + N ++ YS+
Sbjct: 446 NV-CG--LSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRC 502
Query: 363 GMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
G E+A V + ++ G TP ++++ + A A E++ + + E
Sbjct: 503 GSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAE 549
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 71/160 (44%), Gaps = 2/160 (1%)
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
++++ Y R +V ++ ++ MKE G S YN +M +++ + K ++L ++
Sbjct: 634 SMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAK 693
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
G+ PD SY I +Y + + + EM S I D TY+T Y + E+
Sbjct: 694 GIKPDIISYNTVIYAYCRNTRMRDASRIFSEMR-DSGIVPDVITYNTFIGSYAADSMFEE 752
Query: 262 AIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKF 301
AI ++ + YN ++ Y L KDE F
Sbjct: 753 AIGVVRYMIKHGCRPNQNT-YNSIVDGYCKLNRKDEAKLF 791
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 57/290 (19%), Positives = 119/290 (41%), Gaps = 12/290 (4%)
Query: 120 LESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNG 177
E A T + + D L Y +L R G+ ++S ++ +M++ + L Y
Sbjct: 505 FEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCS 564
Query: 178 IMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS 237
++ Y N + + + ++ + P + + L E E++ +
Sbjct: 565 LLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERG 624
Query: 238 HISMDWGTYSTVANYY---IIAGLKEKAIIYLKKCEDIVSKSK-DALGYNHLISHYASLG 293
S D T +++ + Y + G + + Y+K+ S + ++L Y H S A G
Sbjct: 625 -FSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMH--SRSADFG 681
Query: 294 NKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPN 353
+E+++ + IK Y T++ + + + +A ++ E S D N
Sbjct: 682 KSEEILREILAKGIKPDII---SYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPDVITYN 738
Query: 354 IILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
+ Y+ M E+A V++ ++K G P N+++ I GY N ++A
Sbjct: 739 TFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA 788
>gi|15222438|ref|NP_172238.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75163930|sp|Q940Q2.1|PPR19_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g07590, mitochondrial; Flags: Precursor
gi|15809864|gb|AAL06860.1| At1g07590/F22G5_2 [Arabidopsis thaliana]
gi|332190025|gb|AEE28146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 534
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/429 (22%), Positives = 191/429 (44%), Gaps = 16/429 (3%)
Query: 51 VSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWM-SGQGLAFSVHDHAV 109
V++ L W+ +G + ++ I +LR R K AL++ EW+ + +++
Sbjct: 79 VTVGSALQSWMGDGFPVHGGDVYHAINRLRKLGRNKRALELMEWIIRERPYRLGELEYSY 138
Query: 110 QLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSF 169
L+ K+ G+ E F + E + + LY L+ + +G++ +L M+KM+E+G
Sbjct: 139 LLEFTVKLHGVSQGEKLFTRVPQEFQNELLYNNLVIACLDQGVIRLALEYMKKMRELGYR 198
Query: 170 GSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENV 229
S L YN ++ + G+ + I L MK + P +Y I + + +
Sbjct: 199 TSHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEANEHNIDGVLKA 258
Query: 230 LQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHY 289
M+ ++ + + +Y +A + +A L A Y ++ E ++ + + L+ Y
Sbjct: 259 FDGMK-KAGVEPNEVSYCILAMAHAVARLYTVAEAYTEEIEKSIT-GDNWSTLDILMILY 316
Query: 290 ASLGNKDEMMKFW----GLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCY 345
LG + E+ + W G ++ K Y+ + ++G L+ AE++ E +
Sbjct: 317 GRLGKEKELARTWNVIRGFHHVRSK-----SYLLATEAFARVGNLDRAEELWLEMKNVKG 371
Query: 346 CYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
+ N +L Y + G+IEKA V +E+ G P ++ +A G A M++A +
Sbjct: 372 LKETEQFNSLLSVYCKDGLIEKAIGVFREMTGNGFKPNSITYRHLALGCAKAKLMKEALK 431
Query: 406 CMKEALAVHEENKFWRPKPSLVS--SILDWLGDNRDVEEVEAFVSSLKIKVQKRN--MYH 461
++ L + P L + SI++ + DVE E +K R +Y+
Sbjct: 432 NIEMGLNLKTSKSIGSSTPWLETTLSIIECFAEKGDVENSEKLFEEVKNAKYNRYAFVYN 491
Query: 462 ALTEAHIRS 470
AL +A++++
Sbjct: 492 ALFKAYVKA 500
>gi|297849054|ref|XP_002892408.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338250|gb|EFH68667.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 536
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/429 (22%), Positives = 193/429 (44%), Gaps = 16/429 (3%)
Query: 51 VSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWM-SGQGLAFSVHDHAV 109
V++ L W+ +G + ++ I +LR R K AL++ EW+ + +++
Sbjct: 81 VTVGSALQSWMGDGFPVHGGDVYHAINRLRKLGRNKRALELMEWIIRERPYRPGELEYSY 140
Query: 110 QLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSF 169
L+ K+ G+ E F + E + + LY L+ + +G++ +L M+KM+E+G
Sbjct: 141 LLEFTVKLHGVSQGEKLFTRVPQEFQNELLYNNLVIACLDQGVIRLALEYMKKMRELGYR 200
Query: 170 GSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENV 229
S L YN ++ + G+ + I L MK + P +Y I + + +
Sbjct: 201 TSHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEANEHNIDGVLKA 260
Query: 230 LQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHY 289
M+ ++ + + +Y +A + +A L A Y ++ E V+ + + L+ Y
Sbjct: 261 FDGMK-KAGVEPNEVSYCILAMAHAVARLYTVAEAYTEEIEKSVT-GNNWSTLDILMILY 318
Query: 290 ASLGNKDEMMKFW----GLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCY 345
LG + E+++ W G ++ K Y+ + ++G L+ AE++ E +
Sbjct: 319 GRLGKEKELVRTWNVIRGFHHVRSK-----SYLLATEAFAQVGNLDRAEELWLEMKNVRG 373
Query: 346 CYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
+ N +L Y + G+IEKA V +E++ G P ++ +A G A M++A +
Sbjct: 374 LKETEQFNSLLSVYCKDGLIEKAIGVFREMMGDGFKPNSITYRHLALGCAKAKLMKEALK 433
Query: 406 CMKEALAVHEENKFWRPKPSLVS--SILDWLGDNRDVEEVEAFVSSLKIKVQKRN--MYH 461
++ + N P L + SI++ + DVE E +K R +Y+
Sbjct: 434 NIEMGSNLKTSNSIRSSTPWLETTLSIIECFAEKGDVENSEKLFEEVKNAKYNRYAFVYN 493
Query: 462 ALTEAHIRS 470
AL +A++++
Sbjct: 494 ALFKAYVKA 502
>gi|125602283|gb|EAZ41608.1| hypothetical protein OsJ_26140 [Oryza sativa Japonica Group]
Length = 524
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 199/439 (45%), Gaps = 16/439 (3%)
Query: 52 SLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEW-MSGQGLAFSVHDHAVQ 110
S+ + W+ +G+ + + + +LR R+ + ALQV EW M + S D++
Sbjct: 63 SVCAAIRGWMGDGRAVHRGHVFHAVNRLRRRRLHRAALQVMEWIMRERPYKLSELDYSYL 122
Query: 111 LDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFG 170
L+ KV G+ AE+ F + E + + LY L+ + GL+ + +KM+E+
Sbjct: 123 LEFTAKVHGISEAESLFLRIPQEYQNELLYNNLVMACLDLGLIKLAYGYKRKMRELSLPI 182
Query: 171 SALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVL 230
S YN ++ L+++ G+ + I +L MK + V P +Y I + + + V
Sbjct: 183 SPYVYNRLIILHSSPGRQKTISKILAQMKGDRVTPHTSTYNILLKIKANEHNIDGVARVF 242
Query: 231 QEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYA 290
+M+ ++ + + TY +A + +A L + Y++ E+ ++ + + L+ Y
Sbjct: 243 NDMK-RAKVEPNEITYGILAIAHAVARLYTVSHTYVEAIENSMTGTNWST-LEILLILYG 300
Query: 291 SLGNKDEMMKFW----GLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYC 346
G E+ W GL I+ K +I + + K+G +++AE++ ++E +
Sbjct: 301 YHGKAKELKMTWDLMQGLPHIRPK-----SFILAIEAFGKVGSIDQAEEIWGKFESTRKP 355
Query: 347 YDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFEC 406
N IL Y + G+++KA AV KE+ G P ++ + G +++A +
Sbjct: 356 KLTEQFNSILSVYCRHGLVDKASAVFKEMRANGCQPNAITYRHLTLGCLKAGIVKEALKT 415
Query: 407 MKEALAVHEENKFWRPKPSLVSS--ILDWLGDNRDVEEVEAFVSSLKIKVQKRN--MYHA 462
M A K P L ++ IL+ +N D+ + L RN +Y+
Sbjct: 416 MDIAKKEVVTKKVKSSTPWLETTHMILESFAENGDLVNAKRVFDELNESKYCRNSFVYNT 475
Query: 463 LTEAHIRSGQEVDGLLESM 481
L +AH+++ LL +M
Sbjct: 476 LLKAHVKAKVYEPDLLRAM 494
>gi|357139769|ref|XP_003571450.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Brachypodium distachyon]
Length = 517
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 165/349 (47%), Gaps = 4/349 (1%)
Query: 60 WVLEGQKISELELQRVIRQLRSRKRFKHALQVSEW-MSGQGLAFSVHDHAVQLDLIGKVR 118
W+ G+ + + I +LR R+ + LQV EW + + S D++ L+ KV
Sbjct: 71 WMAAGRAVHRGHVFHAINRLRRRRLHRTGLQVMEWVIRERPYKLSELDYSYLLEFTAKVH 130
Query: 119 GLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGI 178
G+ AE+ F + E + + LY L+ + L+ S M+KM+E+ S YN +
Sbjct: 131 GISEAESLFLRIPQEYRNELLYNNLVMACLELSLIKLSYGYMRKMRELSLPISPYVYNRL 190
Query: 179 MCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSH 238
+ L+++ G+ + IP +L MK + V P +Y I + + + V +M+ ++
Sbjct: 191 IILHSSEGRRKTIPKILAQMKASKVTPHTSTYNILLKIQANEHNIDGVARVFNDMK-RAK 249
Query: 239 ISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEM 298
+ + TY +A + +A L + Y++ ++ ++ + + LI Y LG + E+
Sbjct: 250 VEPNEITYGILAISHAVARLYTVSQTYIEAIKNSMTGTNWSTQEILLIL-YGYLGKEKEL 308
Query: 299 MKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLG 358
W L ++ + ++ + + + KIG +E+AE++ E + + N +L
Sbjct: 309 KMTWKLMQVLPHIR-SKSFTLAIEAFGKIGSIEQAEEIWGEIKSARKLRLTEQFNSMLSV 367
Query: 359 YSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECM 407
Y + G+++KA AV KE+ G P ++ +A G +++A M
Sbjct: 368 YCRHGVVDKASAVFKEMRASGCQPNAITYRHLALGCLKAGLVKQALNTM 416
>gi|255549482|ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545122|gb|EEF46633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 924
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 148/322 (45%), Gaps = 8/322 (2%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDK--LYGALLN 145
AL + M +G+ S+ +++ + K+ ++A+ +F D +YG ++
Sbjct: 360 ALSCARKMKEEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKDRHSHMNAIIYGNMIY 419
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
Y + +D++ +L+++M+ G Y+ +M YT G EK V +KE G P
Sbjct: 420 AYCQTCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLKECGFAP 479
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
SY IN Y ++S V + MES I + TYS + N ++ LK+ A +
Sbjct: 480 SVVSYGCLINLYAKVGKISKALEVSKMMESAG-IKHNMKTYSMLINGFL--KLKDWANAF 536
Query: 266 LKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGS 323
ED+V D + YN++I + +G D + + + + +R ++ ++
Sbjct: 537 -AIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMPIIHG 595
Query: 324 LVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPT 383
+ GE++ A + + S N ++LG +K +EKA +L E+ G +P
Sbjct: 596 FARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSPN 655
Query: 384 PNSWSIIAAGYADKNNMEKAFE 405
++++ I GYA + KAFE
Sbjct: 656 EHTYTTIMHGYAALGDTGKAFE 677
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/327 (19%), Positives = 143/327 (43%), Gaps = 10/327 (3%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYF-NSLNDEDKVDK-LYGALLN 145
AL+VS+ M G+ ++ +++ ++ K++ +A F + + D K D LY ++
Sbjct: 500 ALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKDGLKPDVVLYNNIIR 559
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
+ G +D ++ ++++M++ ++ + I+ + G+ ++ DV M+ +G P
Sbjct: 560 AFCGMGTMDRAICMVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALDVFDMMRRSGCIP 619
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
++ I + ++ +L EM + + +S + TY+T+ + Y G KA Y
Sbjct: 620 TVHTFNALILGLVEKRQMEKAIEILDEM-ALAGVSPNEHTYTTIMHGYAALGDTGKAFEY 678
Query: 266 LKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD---YITMLG 322
K D D Y L+ G M + K + + R+ Y ++
Sbjct: 679 FTKLRD-EGLQLDVYTYEALLKACCKSGR---MQSALAVTKEMSAQNIPRNTFVYNILID 734
Query: 323 SLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTP 382
+ G++ EA ++++ + D + + G + +A +++E+ G P
Sbjct: 735 GWARRGDVWEAADLMQQMKQGGVKPDIHTYTSFINACCKAGDMLRASKMMEEMETSGVKP 794
Query: 383 TPNSWSIIAAGYADKNNMEKAFECMKE 409
+++ + G+A + EKA C +E
Sbjct: 795 NVKTYTTLIHGWARASLPEKALRCFQE 821
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/269 (18%), Positives = 111/269 (41%), Gaps = 6/269 (2%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
+ + +++ + R G + +L + M+ G + +N ++ Q EK ++L +
Sbjct: 587 RTFMPIIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDE 646
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
M GV P+ +Y ++ Y A + ++ + + +D TY + +G
Sbjct: 647 MALAGVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDEG-LQLDVYTYEALLKACCKSG 705
Query: 258 LKEKAIIYLKK--CEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR 315
+ A+ K+ ++I ++ YN LI +A G+ E K K
Sbjct: 706 RMQSALAVTKEMSAQNI---PRNTFVYNILIDGWARRGDVWEAADLMQQMKQGGVKPDIH 762
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
Y + + + K G++ A KM+EE E S + + ++ G+++ + EKA +E+
Sbjct: 763 TYTSFINACCKAGDMLRASKMMEEMETSGVKPNVKTYTTLIHGWARASLPEKALRCFQEM 822
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
G P + + + + +A+
Sbjct: 823 KLAGLKPDKAVYHCLMTALLSRATVTEAY 851
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 124/272 (45%), Gaps = 16/272 (5%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I L +++ + A+++ + M+ G++ + H + + + A YF L DE
Sbjct: 627 LILGLVEKRQMEKAIEILDEMALAGVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDEG 686
Query: 135 -KVD-KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
++D Y ALL + G + +L++ ++M + YN ++ + G +
Sbjct: 687 LQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFVYNILIDGWARRGDVWEAA 746
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
D++ MK+ GV PD +Y IN+ ++ +++EME+ S + + TY+T+ +
Sbjct: 747 DLMQQMKQGGVKPDIHTYTSFINACCKAGDMLRASKMMEEMET-SGVKPNVKTYTTLIHG 805
Query: 253 YIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQ 312
+ A L EKA+ ++ + + D Y+ L++ S E G+ I CK+
Sbjct: 806 WARASLPEKALRCFQEMK-LAGLKPDKAVYHCLMTALLSRATVTEAYVRPGILSI-CKEM 863
Query: 313 LNRDYITMLG-------SLVKI----GELEEA 333
+ I +G SL KI GEL EA
Sbjct: 864 IESGLIVDMGTAVHWSKSLRKIERTGGELTEA 895
>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Cucumis sativus]
Length = 962
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 151/321 (47%), Gaps = 8/321 (2%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDK--LYGALLN 145
AL M +G+ S+ +++ + K ESA+ +F ++ +YG ++
Sbjct: 365 ALSCVRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIY 424
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
Y + +D++ +L+++M+E G Y+ +M YT G +K V KE G+ P
Sbjct: 425 AYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNP 484
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
+Y IN Y ++S V +EME + I + TYS + N ++ LK+ A +
Sbjct: 485 SVITYGCLINLYAKLGKVSKALEVSKEME-HAGIKHNMKTYSMLINGFL--KLKDWANAF 541
Query: 266 LKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGS 323
ED++ D + YN++I+ + +G D + + + K R ++ ++
Sbjct: 542 -AIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHG 600
Query: 324 LVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPT 383
+ GE+++A + + +S N ++LG +K +EKA+ +L E+ G +P
Sbjct: 601 FARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPN 660
Query: 384 PNSWSIIAAGYADKNNMEKAF 404
++++ I GYA + KAF
Sbjct: 661 EHTYTTIMHGYASLGDTGKAF 681
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 142/327 (43%), Gaps = 10/327 (3%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSL-NDEDKVDK-LYGALLN 145
AL+VS+ M G+ ++ +++ ++ K++ +A F L D K D LY ++
Sbjct: 505 ALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIIT 564
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
+ G +D ++ +++M++ + + I+ + G+ +K DV M+ +G P
Sbjct: 565 AFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIP 624
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
+Y I + ++ E +L EM + + +S + TY+T+ + Y G KA Y
Sbjct: 625 TVHTYNALILGLVEKRKMEKAEQILDEM-TLAGVSPNEHTYTTIMHGYASLGDTGKAFTY 683
Query: 266 LKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD---YITMLG 322
K D D Y L+ G M + K + + R+ Y ++
Sbjct: 684 FTKLRD-EGLQLDVYTYEALLKACCKSG---RMQSALAVTKEMSAQNIPRNTFIYNILID 739
Query: 323 SLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTP 382
+ G++ EA ++++ + D + S+ G +++A ++E+ G P
Sbjct: 740 GWARRGDIWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKP 799
Query: 383 TPNSWSIIAAGYADKNNMEKAFECMKE 409
+++ + G+A + EKA C +E
Sbjct: 800 NVKTYTTLINGWARASLPEKALSCFEE 826
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 125/303 (41%), Gaps = 37/303 (12%)
Query: 138 KLYGALLNCYVREG-----------------------------------LVDESLSLMQK 162
K YG ++N Y R G ++E+LS ++K
Sbjct: 312 KEYGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRK 371
Query: 163 MKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSE 222
MKE G S + Y+ ++ + TG E + KE + Y I +Y R
Sbjct: 372 MKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCN 431
Query: 223 LSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGY 282
+ E +++EME + I Y T+ + Y + G ++K ++ ++ ++ + + Y
Sbjct: 432 MDKAEALVREMEEEG-IDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKE-CGLNPSVITY 489
Query: 283 NHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWEL 342
LI+ YA LG + ++ + K + Y ++ +K+ + A + E+
Sbjct: 490 GCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIK 549
Query: 343 SCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEK 402
D + N I+ + G +++A +KE+ K+ PT ++ I G+A K M+K
Sbjct: 550 DGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKK 609
Query: 403 AFE 405
A +
Sbjct: 610 ALD 612
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 90/191 (47%), Gaps = 3/191 (1%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I L +++ + A Q+ + M+ G++ + H + + + A TYF L DE
Sbjct: 632 LILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEG 691
Query: 135 -KVD-KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
++D Y ALL + G + +L++ ++M + YN ++ + G +
Sbjct: 692 LQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAA 751
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
D++ MK GV PD +Y IN+ ++ ++EM+S + + TY+T+ N
Sbjct: 752 DLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVG-VKPNVKTYTTLING 810
Query: 253 YIIAGLKEKAI 263
+ A L EKA+
Sbjct: 811 WARASLPEKAL 821
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 86/223 (38%), Gaps = 6/223 (2%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
+LD+ L G +E ++ S A + +GL V+ + L
Sbjct: 648 ILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACC 707
Query: 116 KVRGLESAETYFNSLNDED--KVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
K ++SA ++ ++ + +Y L++ + R G + E+ LMQ+MK G
Sbjct: 708 KSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQMKREGVQPDIH 767
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
Y + + G ++ + +MK GV P+ +Y IN + S + +EM
Sbjct: 768 TYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEM 827
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKAIIY---LKKCEDIV 273
+ S + D Y + + IY L C ++V
Sbjct: 828 K-LSGLKPDRAVYHCLMTSLLSRATVAHGCIYPGILSVCREMV 869
>gi|168030898|ref|XP_001767959.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680801|gb|EDQ67234.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 957
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 151/341 (44%), Gaps = 29/341 (8%)
Query: 83 KRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDK---L 139
+R+ L+ E M +GL S H + + + K A + L E K++ L
Sbjct: 156 ERYDTLLEFYEAMRQRGLVPSAHVYRTMIVTLYKAERHSDALMLWEDLLVE-KLEPNFVL 214
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +++ +EG ++++ + M+ G L YN I+C G++++ + LDMK
Sbjct: 215 YAIIIHILNKEGRTEDAVHTFKDMRAAGHLPDELLYNTIICALGKLGRYQESEALYLDMK 274
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ G+ P F+Y I IN + +S L EM+ I+ D Y ++ N Y AGL
Sbjct: 275 KQGIVPSKFTYTIMINVWSKAGRFASAAETLAEMQRSGCIA-DEVVYCSIINMYGKAGLY 333
Query: 260 EKAIIYLKKCEDIVSKSKDALG-------YNHLISHYASLGNKDEMMKFWGLQKIKCKKQ 312
E+A + + K D LG Y + A G E +K + + K
Sbjct: 334 EEA--------EKIFKEMDTLGLLSHEKSYTSMAKVRAEAGRHAEALKLFDVMAEKGLLT 385
Query: 313 LNRDYITMLGSLVKIGELEEAEK----MLEEWELSCYCYDFRVPNIILLGYSQKGMIEKA 368
+ T+L V+IG++E+A K M+E + Y N+I L YS+ M+E A
Sbjct: 386 TRMTWNTLLHCFVRIGDVEQATKVYNDMVEAGSANVVTYG----NMINL-YSKFQMVEDA 440
Query: 369 DAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
+ +L E+ + G P + Y + + ++KA ++E
Sbjct: 441 ENLLAEMRESGVKPDEYIYGSFVKLYCNSDMIDKATMVVQE 481
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 79/170 (46%), Gaps = 9/170 (5%)
Query: 85 FKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLND-EDKVDKL-YGA 142
K AL+V M + S + + + L K+ L A F LN E D++ Y
Sbjct: 665 LKGALEVYGEMQEADIEPSAKTYTILISLFSKLGDLGRAVQAFEVLNSSEVGADEIAYSQ 724
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
+++CY G E+ L Q+M+ G + + YN ++ + G + +L DM+ G
Sbjct: 725 MIHCYGCAGRPKEAADLFQEMETKGFKPNEVIYNNLLDAFARAGLFAEARLLLSDMRRKG 784
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
PP + +Y + +++YG++ + + E++L H+ D G Y +Y
Sbjct: 785 CPPSSVTYLLLMSAYGSKGKPADAESLL-------HLMQDRGLYPDCRHY 827
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 71/358 (19%), Positives = 148/358 (41%), Gaps = 8/358 (2%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
+LD+ V G I + +I R F+ A + + + S++ + + L
Sbjct: 531 LLDKLVEAGGCIVDTAAVLMINLYGRRGLFQKAKSLFNSLQKKDHPPSLYVYNTMIKLCA 590
Query: 116 KVRGLESAETYFNSLNDEDKV-DKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
+ LE A F+ + + ++ D + L++ Y +EG ++ LM++ K++G +
Sbjct: 591 VCKELEEAIFVFDRMEENGRMFDAVTVSILVHAYTKEGRFKDAAGLMKRAKKVGVAMDTV 650
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
YN + +G + +V +M+E + P +Y I I+ + S+L + +Q
Sbjct: 651 AYNTSLKANLKSGNLKGALEVYGEMQEADIEPSAKTYTILISLF---SKLGDLGRAVQAF 707
Query: 234 E--SQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYAS 291
E + S + D YS + + Y AG ++A ++ E K + + YN+L+ +A
Sbjct: 708 EVLNSSEVGADEIAYSQMIHCYGCAGRPKEAADLFQEMETKGFKPNEVI-YNNLLDAFAR 766
Query: 292 LGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRV 351
G E + K + Y+ ++ + G+ +AE +L + D R
Sbjct: 767 AGLFAEARLLLSDMRRKGCPPSSVTYLLLMSAYGSKGKPADAESLLHLMQDRGLYPDCRH 826
Query: 352 PNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
N ++ Y G + A + E+ G + + + D E+ ++ K+
Sbjct: 827 YNEVIRAYGNVGKLSDACRIFYELKTVGIGLELGCFRTLVKIHLDHGQFEQGWQIYKD 884
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 147/339 (43%), Gaps = 44/339 (12%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ LL+C+VR G V+++ + M E GS + + Y ++ LY+ E ++L +M+
Sbjct: 390 WNTLLHCFVRIGDVEQATKVYNDMVEAGS-ANVVTYGNMINLYSKFQMVEDAENLLAEMR 448
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMES---------QSHISMDWGTYSTVA 250
E+GV PD + Y + Y + V+QEM+ + + S +
Sbjct: 449 ESGVKPDEYIYGSFVKLYCNSDMIDKATMVVQEMKDDGLESVCNEREMFPLGQALQSPID 508
Query: 251 NYYIIAGLKEKA-IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKI-- 307
+ L ++A L++ E ++ K +A G ++ A L M+ +G + +
Sbjct: 509 TQILNQLLIKRAEAGELREAELLLDKLVEAGGC--IVDTAAVL-----MINLYGRRGLFQ 561
Query: 308 KCKKQLN----RD-------YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIIL 356
K K N +D Y TM+ ELEEA + + E + +D +I++
Sbjct: 562 KAKSLFNSLQKKDHPPSLYVYNTMIKLCAVCKELEEAIFVFDRMEENGRMFDAVTVSILV 621
Query: 357 LGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEE 416
Y+++G + A ++K K G + +A + K N++ +K AL V+ E
Sbjct: 622 HAYTKEGRFKDAAGLMKRAKKVGV-----AMDTVAYNTSLKANLKSG--NLKGALEVYGE 674
Query: 417 NKFWRPKPS-----LVSSILDWLGD-NRDVEEVEAFVSS 449
+ +PS ++ S+ LGD R V+ E SS
Sbjct: 675 MQEADIEPSAKTYTILISLFSKLGDLGRAVQAFEVLNSS 713
>gi|242078281|ref|XP_002443909.1| hypothetical protein SORBIDRAFT_07g004200 [Sorghum bicolor]
gi|241940259|gb|EES13404.1| hypothetical protein SORBIDRAFT_07g004200 [Sorghum bicolor]
Length = 521
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 95/435 (21%), Positives = 198/435 (45%), Gaps = 8/435 (1%)
Query: 52 SLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQ-GLAFSVHDHAVQ 110
S+ + W+ +G+ + + I +LR + + ALQV EW+ + S D++
Sbjct: 67 SVGAAMRGWMADGRAVHRGHVFHAINRLRRHRLHRTALQVMEWIVRERPYKLSELDYSYL 126
Query: 111 LDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFG 170
L+ KV G+ AE+ F + E + + LY L+ + L+ S + M+KM+E+
Sbjct: 127 LEFTAKVHGISEAESLFLRVPQEYQKELLYNNLVMAALDLDLIKHSYAYMRKMRELSLPI 186
Query: 171 SALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVL 230
S YN ++ L+++ + + I +L MK + V P +Y I + + + V
Sbjct: 187 SPYVYNRLIILHSSPSRRKTISKILYQMKADRVTPHTSTYNILLKIQANEHNIDGLARVF 246
Query: 231 QEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYA 290
+M+ ++ I + TY +A + +A L Y++ E+ ++ + + L+ Y
Sbjct: 247 SDMK-RAKIEPNEITYGILAISHAVARLYTVCHTYVEAIENSMTGTNWS-TLEILLILYG 304
Query: 291 SLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFR 350
LG + E+ + W + + ++ + + + K+G +++AEK+ + + +
Sbjct: 305 YLGKEKELKRTWEIMQ-DLPHVRSKSFTVAIEAFGKVGSIDQAEKIWVQIKSTKKLSLTE 363
Query: 351 VPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFEC--MK 408
N IL Y + G+++KA +V KE+ G P ++ +A G +++A M
Sbjct: 364 QFNSILSVYCRHGVVDKASSVFKEMRANGCQPNAITYRHLALGCLKSGLVKEALNTIDMG 423
Query: 409 EALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRN--MYHALTEA 466
+ V ++ + P +L+ + D+E + S L RN +Y+ L +A
Sbjct: 424 KKEVVTKKVRSSTPWLETTHLLLENFAEIGDLENAKRLYSELNESKYSRNSFVYNTLLKA 483
Query: 467 HIRSGQEVDGLLESM 481
++++ LL +M
Sbjct: 484 YVKAKVYEPDLLRTM 498
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 138/304 (45%), Gaps = 9/304 (2%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+ + G + + L +M+ G + + YN ++ Y G+ ++ +L M
Sbjct: 13 YNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMS 72
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG-L 258
G+ P+ SY + IN + +L+EM + + D TY+T+ N Y G
Sbjct: 73 SKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKG-FTPDEVTYNTLLNGYCKEGNF 131
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
+ +I+ + + VS S + Y LI+ N + M+F+ +I+ + R Y
Sbjct: 132 HQALVIHAEMVRNGVSPS--VVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYT 189
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
T++ + G L EA ++L E S + N + G+ +E+A V++E+V+K
Sbjct: 190 TLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEK 249
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNR 438
G P S+S I +G+ K +++AF+ +E + K P SS++ L + R
Sbjct: 250 GLAPDVVSYSTIISGFCRKGELDRAFQMKQEMV-----EKGVSPDAVTYSSLIQGLCEMR 304
Query: 439 DVEE 442
+ E
Sbjct: 305 RLTE 308
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 167/382 (43%), Gaps = 37/382 (9%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
+L++ +G E+ ++ F AL + M G++ SV + ++ +
Sbjct: 102 ILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMC 161
Query: 116 KVRGLESAETYFNSLNDED--KVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
K R L A +F+ + ++ Y L++ + R+GL++E+ ++ +M E G S +
Sbjct: 162 KARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVV 221
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
YN + + + E+ V+ +M E G+ PD SY I+ + + EL + QEM
Sbjct: 222 TYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEM 281
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK------SKDALGYNHLIS 287
+ +S D TYS+ +I GL E + L + D+ + D Y LI+
Sbjct: 282 VEKG-VSPDAVTYSS-----LIQGLCE--MRRLTEACDLSQEMLDMGLPPDEFTYTTLIN 333
Query: 288 HYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT---MLGSLVKIGELEEAEKML-----EE 339
Y G+ ++ + L K D +T ++ L K EA+++L EE
Sbjct: 334 AYCVEGDLNKALH---LHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEE 390
Query: 340 WELSCYCYDFRVPNI----------ILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSI 389
S YD + N ++ G+ KG++ +AD V + +V++ P +++
Sbjct: 391 SVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNV 450
Query: 390 IAAGYADKNNMEKAFECMKEAL 411
I G+ N+ KAF KE +
Sbjct: 451 IIHGHCRGGNLPKAFNLYKEMI 472
>gi|302784330|ref|XP_002973937.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
gi|300158269|gb|EFJ24892.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
Length = 823
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 159/344 (46%), Gaps = 12/344 (3%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRG--LESAETYFNSLND 132
+I L +RF + + E M +G + + V LDL GK RG + ++ F + D
Sbjct: 219 LISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGK-RGDSWDRIQSLFQEMKD 277
Query: 133 ED--KVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEK 190
+ D Y ++ ++ E+L L Q+MKE G + + YN ++ +Y G H++
Sbjct: 278 LEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKE 337
Query: 191 IPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVA 250
++L++M+ G+ P+ +Y I +Y AR+ L L++ + D TY T+
Sbjct: 338 ASELLVEMEAAGISPNIVTYNELIAAY-ARAGLCDEAAALKKSLLSKGLCPDEFTYCTLI 396
Query: 251 NYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMK-FWGLQKIKC 309
+ + A EKA+ + + + + + YN LI Y + D+MMK F +Q+ C
Sbjct: 397 SAFNRAERYEKALETFTEMRK-TNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNC 455
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKAD 369
L + ++L S G L E + E + + Y NI++ Y + G ++ +
Sbjct: 456 TPDL-VTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYSV 514
Query: 370 AVLKEIVKKGKTPTPNSWSIIAAGYADKN---NMEKAFECMKEA 410
+ K +++ G PT +++ + A A + EK + M EA
Sbjct: 515 DIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEA 558
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 152/345 (44%), Gaps = 27/345 (7%)
Query: 67 ISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQ--LDLIGKVRGLESAE 124
+++ EL ++ L + ++K AL+V EW+ F + A L ++G L +A
Sbjct: 139 LTDSELVYFVKALGRQGKWKKALEVFEWIRKHD-CFKLRGVATASILSVLGNHEQLPAAL 197
Query: 125 TYFNSLNDEDKVD---KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCL 181
F SL ++ Y +L++ R DE ++L + M+ G G+A+ YN ++ L
Sbjct: 198 ELFESLKQDESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDL 257
Query: 182 YTNTGQH-EKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHIS 240
Y G ++I + +MK+ + PD+++Y I + S + QEM+ ++
Sbjct: 258 YGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMK-EAGCC 316
Query: 241 MDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMK 300
+ TY+ + + Y G+ ++A L + E S + + YN LI+ YA G DE
Sbjct: 317 PNRVTYNALLDVYGKGGMHKEASELLVEME-AAGISPNIVTYNELIAAYARAGLCDEAA- 374
Query: 301 FWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEW----ELSCYCYDFRVPNIIL 356
L+K K L D T + E EK LE + + +C PNI+
Sbjct: 375 --ALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNC------TPNIVT 426
Query: 357 LG--YSQKGMIEKAD---AVLKEIVKKGKTPTPNSWSIIAAGYAD 396
G +EK D V K + +K TP +W+ + + +
Sbjct: 427 YNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGN 471
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 131/306 (42%), Gaps = 18/306 (5%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ L+ CY R G VD S+ + + + G + + +M G+ ++ V +M
Sbjct: 497 FNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMA 556
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E G+ + + I+SY + + + E+E + + T Y G+
Sbjct: 557 EAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCGMD 616
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
+A + L + D S D +N +IS A G + +K L++I+ K QL D +T
Sbjct: 617 NEAQLALNQLYD-NGHSPDIKVFNAMISMCAKRGWIERAVKL--LEEIR-KAQLKPDGVT 672
Query: 320 ---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
++ + G +AE+++ E + + N +L Y++ G ++ A V ++V
Sbjct: 673 YNCLMSMYGREGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMV 732
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVS--SILDWL 434
P +++ + Y+ + KEAL+V E +P+ ++ ++LD
Sbjct: 733 AARVRPDNFTFNTLVGSYS-------SLGLYKEALSVIEYMTEHGCQPTQITFKALLD-- 783
Query: 435 GDNRDV 440
G NR+
Sbjct: 784 GYNRNA 789
>gi|118482495|gb|ABK93170.1| unknown [Populus trichocarpa]
Length = 96
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 407 MKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK-IKVQKRNMYHALTE 465
MK AL ++EENK W+P +++ IL WLGD E+ EAFVSSLK + R MYHA+ +
Sbjct: 1 MKAALCLYEENKEWKPNQKVITGILSWLGDEGSAEDAEAFVSSLKNVIPMNREMYHAVLK 60
Query: 466 AHIRSGQEVDGLLESMKADDIDED 489
AHIR+G+EV GLL+ MK I ED
Sbjct: 61 AHIRAGKEVHGLLDGMKTCKIKED 84
>gi|297836834|ref|XP_002886299.1| hypothetical protein ARALYDRAFT_319921 [Arabidopsis lyrata subsp.
lyrata]
gi|297332139|gb|EFH62558.1| hypothetical protein ARALYDRAFT_319921 [Arabidopsis lyrata subsp.
lyrata]
Length = 424
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 140/347 (40%), Gaps = 71/347 (20%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
+ L RI + D VS+TP+L +W G + + EL+ +I L RF HALQVS+WM
Sbjct: 37 DTLKRRIERVQDSTVSITPLLREWCQIGNQTALSELRSIITSLHRSNRFFHALQVSDWMI 96
Query: 97 GQ-GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDE 155
Q S D +L L KV G+E A +F ++ ED
Sbjct: 97 EQKAYKLSSMDFERRLYLTAKVCGVEEAAKFFETVPAED--------------------- 135
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
H+ + +L +M E + P S+ +
Sbjct: 136 --------------------------------HDMVVKLLGEMDEKKMQPQGLSFDKLLT 163
Query: 216 SYGARSEL--SSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIV 273
SY S+L ME L + E I W T+ Y+ AG +EK + L++ E V
Sbjct: 164 SYSMASDLDVQGMEKFLSKWEVM--IQEKWTTFYFPGLVYLRAGFREKGLALLRRSEPSV 221
Query: 274 SKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEA 333
+ Y L++ Y S +++ + W L K + ++ + +K G+L+E
Sbjct: 222 GDRAREIIYGCLMTAYCSENLTEDVYRLWNLAKDYGISFDSSKCSDIVKAFMKKGDLDE- 280
Query: 334 EKMLEEWELSCYCYDFRVPNIILL--GYSQKGMIEKADAVLKEIVKK 378
++EEW+ PNI L+ G + M E+A+ ++ KK
Sbjct: 281 --VMEEWD--------ECPNIDLMDFGLQHRCMKEEAEKIVDMFGKK 317
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 150/337 (44%), Gaps = 13/337 (3%)
Query: 111 LDLIGKVRG---LESAETYFNSLNDEDKVD-KLYGALLNCYVREGLVDESLSLMQKMKEM 166
LD I + RG L + E Y + + Y L+ + G + + L +M+
Sbjct: 184 LDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERN 243
Query: 167 GSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSM 226
G + + YN ++ Y G+ ++ +L M G+ P+ SY + IN +
Sbjct: 244 GCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEA 303
Query: 227 ENVLQEMESQSHISMDWGTYSTVANYYIIAG-LKEKAIIYLKKCEDIVSKSKDALGYNHL 285
+L+EM + + D TY+T+ N Y G + +I+ + + VS S + Y L
Sbjct: 304 WEILEEMGYKG-FTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPS--VVTYTAL 360
Query: 286 ISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCY 345
I+ N + M+F+ +I+ + R Y T++ + G L EA ++L E S +
Sbjct: 361 INSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGF 420
Query: 346 CYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
N + G+ +E+A V++E+V+KG P S+S I +G+ K +++AF+
Sbjct: 421 SPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQ 480
Query: 406 CMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEE 442
+E + K P SS++ L + R + E
Sbjct: 481 MKQEMV-----EKGVSPDAVTYSSLIQGLCEMRRLTE 512
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 97/417 (23%), Positives = 181/417 (43%), Gaps = 45/417 (10%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
+L++ +G E+ ++ F AL + M G++ SV + ++ +
Sbjct: 306 ILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMC 365
Query: 116 KVRGLESAETYFNSLNDED--KVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
K R L A +F+ + ++ Y L++ + R+GL++E+ ++ +M E G S +
Sbjct: 366 KARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVV 425
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
YN + + + E+ V+ +M E G+ PD SY I+ + + EL + QEM
Sbjct: 426 TYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEM 485
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDI------VSKSKDALGYNHLIS 287
+ +S D TYS+ +I GL E + L + D+ + D Y LI+
Sbjct: 486 VEKG-VSPDAVTYSS-----LIQGLCE--MRRLTEACDLSQEMLDMGLPPDEFTYTTLIN 537
Query: 288 HYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT---MLGSLVKIGELEEAEKML-----EE 339
Y G+ ++ + L K D +T ++ L K EA+++L EE
Sbjct: 538 AYCVEGDLNKALH---LHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEE 594
Query: 340 WELSCYCYDFRVPNI----------ILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSI 389
S YD + N ++ G+ KG++ +AD V + +V++ P +++
Sbjct: 595 SVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNV 654
Query: 390 IAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWL---GDNRDVEEV 443
I G+ N+ KAF KE + + + P V +++ L G N ++ EV
Sbjct: 655 IIHGHCRGGNLPKAFNLYKEMI-----HSGFVPHTVTVITLIKALFKEGMNEEMSEV 706
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 125/315 (39%), Gaps = 76/315 (24%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +++ + R+G +D + + Q+M E G A+ Y+ ++ + + D+ +M
Sbjct: 462 YSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEML 521
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ G+PPD F+Y IN+Y +L+ ++ EM + + D TYS + N GL
Sbjct: 522 DMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLP-DAVTYSVLIN-----GLN 575
Query: 260 EKA-----------IIY-------------LKKCEDIVSKSKDAL--------------- 280
++A +IY ++ C +I KS AL
Sbjct: 576 KQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADR 635
Query: 281 ---------------GYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY-------I 318
YN +I + GN + + K+ ++ + I
Sbjct: 636 VFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLY-------KEMIHSGFVPHTVTVI 688
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
T++ +L K G EE +++ + SC + + +++ ++G +E VL ++ K
Sbjct: 689 TLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEGNMEAVLNVLTDMAKD 748
Query: 379 GKTPTPNSWSIIAAG 393
G PNS AG
Sbjct: 749 GL--LPNSGKTAYAG 761
>gi|255576798|ref|XP_002529286.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531275|gb|EEF33118.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 105/455 (23%), Positives = 193/455 (42%), Gaps = 49/455 (10%)
Query: 50 DVSLTPVLDQWVLE-GQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHA 108
+V +P LD + G + +L ++R L + R++ ++ +WM Q SV +
Sbjct: 92 EVQQSPDLDSALRRLGAILKAQDLNVILRNLGKQSRWQDLSKLFDWMQ-QHSKISVSSYT 150
Query: 109 VQLDLIGKVRGLESAETYFNSLNDEDKVDKLY--GALLNCYVREGLVDESLSLMQKMKEM 166
+ +GK A +NS+ DE + ++ ++L+C VR G D SL L KMK+
Sbjct: 151 SYMKFMGKSLNPAKALEIYNSIADESVKNNVFICNSVLSCLVRSGKFDISLKLFHKMKQN 210
Query: 167 G--------------------------SFGSALNYNG----------IMCLYTNTGQHEK 190
G F L YNG I+ + + + E+
Sbjct: 211 GLTPDTITYSTLLSGCIKAKDGYSKTLDFVQELKYNGLQMDTVIYGTILAVCASHNRCEE 270
Query: 191 IPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVA 250
MK G P+ F Y +N+Y + E ++Q+M+S + + ++T+
Sbjct: 271 AESYFSQMKNEGHLPNVFHYSSLLNAYASSGNYKKAEELVQDMKSLGLVP-NKVIWTTLL 329
Query: 251 NYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCK 310
Y+ GL EK+ L + + + ++D + Y L+ + G DE F+ K K
Sbjct: 330 KVYVRGGLFEKSQQLLLE-LETLGYAEDEMPYCLLMDGLSKAGRVDEARSFFDEMKEKNV 388
Query: 311 KQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADA 370
K Y M+ + + LEEA+++ +E+E YD + N +L Y + G +E
Sbjct: 389 KSDGYAYSIMISAYCRGRLLEEAKQLAKEFEAKYDKYDVVILNTMLCAYCRAGDMESVMQ 448
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSI 430
++++ + +P+ ++ I+ + + A++ M++ K +P+ L S +
Sbjct: 449 TMRKMDELAISPSYCTFHILIKYFCKQKLYLLAYQTMEDM-----HRKGHQPEEELCSML 503
Query: 431 LDWLGDNRDVEEVEAFVSSLKIKVQKRNMYHALTE 465
+ LG + EAF +K KR M AL E
Sbjct: 504 IFHLGKAKAY--TEAFSVYTMLKYGKRTMCKALHE 536
>gi|255562320|ref|XP_002522167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538605|gb|EEF40208.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 342
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 153/332 (46%), Gaps = 16/332 (4%)
Query: 163 MKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSE 222
MK++ + N ++ LY + +KI DVLL M++ + P F+Y++ I++ G ++
Sbjct: 1 MKDLEFPVTTFACNQLLLLYKRLDK-KKIADVLLLMEKENIKPSLFTYKLLIDTKGQSND 59
Query: 223 LSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGY 282
L+ M+ +++ M++ I D + +A +Y GLKEKA LK+ E + +
Sbjct: 60 LTGMDQIVETMKADG-IEPDINIRAILAKHYASGGLKEKAEAILKEMEG-GNLEEHRWAC 117
Query: 283 NHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEA-EKMLEEW- 340
L+ YA+LG DE+ + W + + + + I G L KI + EE +ML W
Sbjct: 118 RLLLPLYAALGKADEVERVWKVCESSPQLEECVAVIEAWGKLKKIDKAEEVFNRMLTTWK 177
Query: 341 ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNM 400
+LS Y + +L Y+ M+ ++K++ G P +W + Y + +
Sbjct: 178 KLSSRHY-----SALLKVYASHKMLANGKDLIKKMADSGCRIGPLTWDSLVKLYVEAGEV 232
Query: 401 EKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK--VQKRN 458
EKA + +A + +P S I+D DV E ++ V +
Sbjct: 233 EKADSVLHKA----AQQNHMKPMFSSYIVIMDQYAKRGDVHNAEKMFHRMRQAGYVARLR 288
Query: 459 MYHALTEAHIRSGQEVDGLLESMKADDIDEDK 490
+ AL + +I + G+ E MKAD+I +K
Sbjct: 289 QFQALVQTYINAKAPAYGIRERMKADNIFPNK 320
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 61/129 (47%), Gaps = 3/129 (2%)
Query: 115 GKVRGLESAETYFNSLNDEDK--VDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
GK++ ++ AE FN + K + Y ALL Y ++ L++KM + G
Sbjct: 157 GKLKKIDKAEEVFNRMLTTWKKLSSRHYSALLKVYASHKMLANGKDLIKKMADSGCRIGP 216
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLD-MKENGVPPDNFSYRICINSYGARSELSSMENVLQ 231
L ++ ++ LY G+ EK VL ++N + P SY + ++ Y R ++ + E +
Sbjct: 217 LTWDSLVKLYVEAGEVEKADSVLHKAAQQNHMKPMFSSYIVIMDQYAKRGDVHNAEKMFH 276
Query: 232 EMESQSHIS 240
M +++
Sbjct: 277 RMRQAGYVA 285
>gi|302771417|ref|XP_002969127.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
gi|300163632|gb|EFJ30243.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
Length = 646
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 159/344 (46%), Gaps = 12/344 (3%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRG--LESAETYFNSLND 132
+I L +RF + + E M +G + + V LDL GK RG + ++ F + D
Sbjct: 80 LISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGK-RGDSWDRIQSLFQEMKD 138
Query: 133 ED--KVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEK 190
+ D Y ++ ++ E+L L Q+MKE G + + YN ++ +Y G H++
Sbjct: 139 LEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKE 198
Query: 191 IPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVA 250
++L++M+ G+ P+ +Y I +Y AR+ L L++ + D TY T+
Sbjct: 199 ASELLVEMEAAGISPNIVTYNELIAAY-ARAGLCDEAAALKKSLLSKGLCPDEFTYCTLI 257
Query: 251 NYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMK-FWGLQKIKC 309
+ + A EKA+ + + + + + YN LI Y + D+MMK F +Q+ C
Sbjct: 258 SAFNRAERYEKALETFTEMRK-TNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNC 316
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKAD 369
L + ++L S G L E + E + + Y NI++ Y + G ++ +
Sbjct: 317 TPDL-VTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYSV 375
Query: 370 AVLKEIVKKGKTPTPNSWSIIAAGYADKN---NMEKAFECMKEA 410
+ K +++ G PT +++ + A A + EK + M EA
Sbjct: 376 DIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEA 419
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 149/341 (43%), Gaps = 27/341 (7%)
Query: 71 ELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQ--LDLIGKVRGLESAETYFN 128
EL ++ L + ++K AL+V EW+ F + A L ++G L +A F
Sbjct: 4 ELVYFVKALGRQGKWKKALEVFEWIRKHD-CFKLRGVATASILSVLGNHEQLPAALELFE 62
Query: 129 SLNDEDKVD---KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNT 185
SL ++ Y +L++ R DE ++L + M+ G G+A+ YN ++ LY
Sbjct: 63 SLKQDESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKR 122
Query: 186 GQH-EKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWG 244
G ++I + +MK+ + PD+++Y I + S + QEM+ ++ +
Sbjct: 123 GDSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMK-EAGCCPNRV 181
Query: 245 TYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGL 304
TY+ + + Y G+ ++A L + E S + + YN LI+ YA G DE L
Sbjct: 182 TYNALLDVYGKGGMHKEASELLVEME-AAGISPNIVTYNELIAAYARAGLCDEAA---AL 237
Query: 305 QKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEW----ELSCYCYDFRVPNIILLG-- 358
+K K L D T + E EK LE + + +C PNI+
Sbjct: 238 KKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNC------TPNIVTYNIL 291
Query: 359 YSQKGMIEKAD---AVLKEIVKKGKTPTPNSWSIIAAGYAD 396
G +EK D V K + +K TP +W+ + + +
Sbjct: 292 IDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGN 332
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 107/275 (38%), Gaps = 36/275 (13%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ L+ CY R G VD S+ + + + G + + +M G+ ++ V +M
Sbjct: 358 FNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMA 417
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E G+ + + I+SY + + + E+E + + + +++A
Sbjct: 418 EAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLS----GILCKTFVLA--- 470
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
Y K C D ++ L N L + G+ ++ F
Sbjct: 471 -----YCKCCMD----NEAQLALNQLYDN----GHSPDIKVFNA---------------- 501
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
M+ K G +E A K+LEE + D N ++ Y ++GM KA+ V+ E+ + G
Sbjct: 502 MISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYHKAEEVMSEMRRAG 561
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVH 414
K P +++ + Y M+ A + +A
Sbjct: 562 KAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAAR 596
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L++ Y REG+ ++ +M +M+ G + + YN ++ YT G+ + V DM
Sbjct: 534 YNCLMSMYGREGMYHKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMV 593
Query: 200 ENGVPPDNFSYRICINSYGA 219
V PDNF++ + SY +
Sbjct: 594 AARVRPDNFTFNTLVGSYSS 613
>gi|242074832|ref|XP_002447352.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
gi|241938535|gb|EES11680.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
Length = 888
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 148/327 (45%), Gaps = 14/327 (4%)
Query: 86 KHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL----YG 141
+ AL E M +GL +V +++ + GK ESA+ F + K+D L Y
Sbjct: 305 RGALSCVEEMKSEGLEMTVVTYSILIAGYGKTNDAESADKLFKEA--KTKLDNLNGIIYS 362
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
+++ + + G +D + L+++M+E G Y+ +M YT +K V +KE
Sbjct: 363 NIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKEC 422
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYI-IAGLKE 260
G P SY IN Y ++ V +EMES I + TYS + N +I +
Sbjct: 423 GFRPSIISYGCLINLYVKIGKVPKALAVSKEMESHG-IKHNNKTYSMLINGFIHLHDFAN 481
Query: 261 KAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
I+ ED++ D YN L+ + +GN D ++ + K + + NR +
Sbjct: 482 AFSIF----EDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFR 537
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
++ G+++ A L+ S N ++ G +K +E+A +VL ++
Sbjct: 538 PIIEGFAVAGDMKRALDTLDLMRRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIA 597
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAFE 405
G P ++++II GYA ++ KAFE
Sbjct: 598 GIAPNEHTYTIIMRGYAASGDIGKAFE 624
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 129/294 (43%), Gaps = 25/294 (8%)
Query: 52 SLTPVLDQWVLEG---QKISELELQR-------------VIRQLRSRKRFKHALQVSEWM 95
+ P+++ + + G + + L+L R +I L + + + A+ V + M
Sbjct: 535 TFRPIIEGFAVAGDMKRALDTLDLMRRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKM 594
Query: 96 SGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED-KVD-KLYGALLNCYVREGLV 153
S G+A + H + + + + A YF + + K+D +Y LL + G +
Sbjct: 595 SIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRM 654
Query: 154 DESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRIC 213
+L++ ++M + YN ++ + G + D++ MKE+G+PP+ ++
Sbjct: 655 QSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLMKQMKEDGIPPNIHTFTSY 714
Query: 214 INSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIV 273
IN+ ++ ENV+QEM + + + T++T+ + L ++A LK E++
Sbjct: 715 INACCKAGDMQRAENVIQEM-ADVGLKPNVKTFTTLIKGWAKVSLPDRA---LKCFEEMK 770
Query: 274 SKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLV 325
S D Y+ L++ S E + G+ + C++ D L + V
Sbjct: 771 SAGLKPDEAAYHCLVTSLLSRATVMEGSTYTGILSV-CREMFENDLTVDLRTAV 823
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/276 (19%), Positives = 123/276 (44%), Gaps = 8/276 (2%)
Query: 137 DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
+K Y L+N ++ + S+ + M + G YN ++ + G ++ +
Sbjct: 463 NKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFE 522
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
MK+ + P N ++R I + ++ + L M +S + TY+ + + I
Sbjct: 523 RMKKERMQPSNRTFRPIIEGFAVAGDMKRALDTLDLMR-RSGCAPTVMTYNALIHGLIRK 581
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
E+A+ L K I + + Y ++ YA+ G+ + +++ KIK + L D
Sbjct: 582 HQVERAVSVLDKM-SIAGIAPNEHTYTIIMRGYAASGDIGKAFEYF--TKIK-ESGLKLD 637
Query: 317 ---YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
Y T+L + K G ++ A + E + + NI++ G++++G + +A ++K
Sbjct: 638 VYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLMK 697
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
++ + G P ++++ +M++A ++E
Sbjct: 698 QMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQE 733
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 115/503 (22%), Positives = 209/503 (41%), Gaps = 60/503 (11%)
Query: 27 AYRAVKPVARNNLYSRISP---LGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRK 83
+Y + P + L S I P G D L+ + + + + + S EL ++ L K
Sbjct: 91 SYHGLSPQGQQVLRSLIEPNFDSGQLDSVLSELFEPFKDKPESTSS-ELLAFLKGLGFHK 149
Query: 84 RFKHALQVSEWMSGQGLAFSVHDH---AVQLDLIGKVRGLESAETYFNSLNDEDKVDKLY 140
+F AL+ +W Q S+ D+ A+ + ++GK + SA FN L ++ +Y
Sbjct: 150 KFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVY 209
Query: 141 G--ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQH-EKIPDVLLD 197
+L++ + G E++++ +KM+E G + + YN I+ ++ G KI ++
Sbjct: 210 SYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEK 269
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
MK +G+ PD ++Y I S V +EM++ + S D TY+ + + Y G
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKA-AGFSYDKVTYNALLDVY---G 325
Query: 258 LKEKAIIYLKKCEDIV--SKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR 315
+ +K ++V S + YN LIS YA G DE M+ K K
Sbjct: 326 KSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVF 385
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWE---------------------------------- 341
Y T+L + G++E A + EE
Sbjct: 386 TYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI 445
Query: 342 -LSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNM 400
+ D N +L + Q GM + V KE+ + G P +++ + + Y+ +
Sbjct: 446 NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 505
Query: 401 EKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRN-- 458
E+A + L + P S +++L L E+ E ++ ++ K N
Sbjct: 506 EQAMTVYRRML-----DAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNEL 560
Query: 459 MYHALTEAHIRSGQEVDGLLESM 481
Y +L A+ +G+E+ GL+ S+
Sbjct: 561 TYCSLLHAYA-NGKEI-GLMHSL 581
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 2/160 (1%)
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
++++ Y R +V ++ ++ MKE G S YN +M +++ + K ++L ++
Sbjct: 634 SMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAK 693
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
G+ PD SY I +Y + + + EM + S I D TY+T Y + E+
Sbjct: 694 GIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRN-SGIVPDVITYNTFIGSYAADSMFEE 752
Query: 262 AIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKF 301
AI ++ + YN ++ Y L KDE F
Sbjct: 753 AIGVVRYMIKHGCRPNQNT-YNSIVDGYCKLNRKDEAKLF 791
Score = 38.5 bits (88), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 58/290 (20%), Positives = 119/290 (41%), Gaps = 12/290 (4%)
Query: 120 LESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNG 177
E A T + + D L Y +L R G+ ++S ++ +M++ + L Y
Sbjct: 505 FEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCS 564
Query: 178 IMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS 237
++ Y N + + + ++ + P + + L E E++ +
Sbjct: 565 LLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERG 624
Query: 238 HISMDWGTYSTVANYYIIAGLKEKA---IIYLKKCEDIVSKSK-DALGYNHLISHYASLG 293
S D T +++ + Y + KA + Y+K+ S + ++L Y H S A G
Sbjct: 625 -FSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMH--SRSADFG 681
Query: 294 NKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPN 353
+E+++ + IK Y T++ + + + +A ++ E S D N
Sbjct: 682 KSEEILREILAKGIKPDII---SYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYN 738
Query: 354 IILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
+ Y+ M E+A V++ ++K G P N+++ I GY N ++A
Sbjct: 739 TFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA 788
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 142/320 (44%), Gaps = 13/320 (4%)
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
L ++M+ G + + YN ++ Y + ++ L M G+ P+ ++ + IN
Sbjct: 2 GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK 275
L VL EM + ++ D TY+T+ N Y G +A++ ++V
Sbjct: 62 GLCRDGRLKETSEVLVEMSRKGYVP-DEVTYNTLVNGYCKEGNFHQALVLHA---EMVRN 117
Query: 276 --SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEA 333
S + + Y LI+ GN + M+F+ ++ R Y T++ + G L+EA
Sbjct: 118 GLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEA 177
Query: 334 EKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAG 393
++L E S + N ++ G+ G +E+A +L+++V KG P S+S I +G
Sbjct: 178 YRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISG 237
Query: 394 YADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEE-VEAFVSSLKI 452
+A +++AF+ E + K P SS++ L + R + E + F L I
Sbjct: 238 FARNQELDRAFQMKVEMIG-----KSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTI 292
Query: 453 KVQKRNM-YHALTEAHIRSG 471
K+ Y L A+ + G
Sbjct: 293 KLPPDEFTYTTLINAYCKEG 312
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 156/354 (44%), Gaps = 35/354 (9%)
Query: 85 FKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV--DKLYGA 142
F AL + M GL+ +V + ++ + K L A +F+ ++ ++ Y
Sbjct: 104 FHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTT 163
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
++N + ++GL+DE+ ++ +M G S + YN ++ + G+ E+ +L DM G
Sbjct: 164 IINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKG 223
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
V PD SY I+ + EL + EM +S + D TYS+ +I GL E+
Sbjct: 224 VLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLP-DAVTYSS-----LIQGLCEQR 277
Query: 263 IIYLKKCEDI-----VSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
+ + C+ + D Y LI+ Y G ++ K L +K D
Sbjct: 278 RL-TEACDMFQEMLTIKLPPDEFTYTTLINAYCKEG---DLNKALHLHDEMIQKGFLPDA 333
Query: 318 IT---MLGSLVKIGELEEAEKMLEEWEL---------------SCYCYDFRVPNIILLGY 359
+T ++ L K +EA ++L + +C +F+ ++ G+
Sbjct: 334 VTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGF 393
Query: 360 SQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAV 413
KG++++AD V + ++ K P +++I G+ N+ KA++ KE + V
Sbjct: 394 CMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHV 447
>gi|162460542|ref|NP_001105869.1| pentatricopeptide repeat protein [Zea mays]
gi|95931777|gb|ABF57644.1| pentatricopeptide repeat protein [Zea mays]
Length = 886
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 148/327 (45%), Gaps = 14/327 (4%)
Query: 86 KHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL----YG 141
+ AL E M +G+ +V +++ + GK +SA+ F + K+D L Y
Sbjct: 303 RGALSCVEEMKSEGIEMTVVTYSILISGYGKTNDAQSADNLFKEA--KTKLDNLNGIIYS 360
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
+++ + + G +D + L+++M+E G Y+ +M YT +K V +KE
Sbjct: 361 NIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKEC 420
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYI-IAGLKE 260
G P SY IN Y ++ + +EMES I + TYS + N +I +
Sbjct: 421 GFKPTIISYGCLINLYVKVGKVPKAIAISKEMESHG-IKHNNKTYSMLINGFIHLHDFAN 479
Query: 261 KAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
I+ ED++ D YN L+ + +GN D ++ + + + + NR +
Sbjct: 480 AFSIF----EDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFR 535
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
++ G+++ A L+ S N ++ G +K +EKA +VL ++
Sbjct: 536 PIIEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIA 595
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAFE 405
G P ++++II GYA ++ KAFE
Sbjct: 596 GIAPNEHTYTIIMRGYAASGDIGKAFE 622
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 120/274 (43%), Gaps = 9/274 (3%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
LD G + + +I L + + + A+ V + MS G+A + H + + +
Sbjct: 553 TLDLMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYA 612
Query: 116 KVRGLESAETYFNSLNDED-KVD-KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
+ A YF + + K+D +Y LL + G + +L++ ++M +
Sbjct: 613 ASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTF 672
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
YN ++ + G + D+L MKE+G+PP+ ++ IN+ ++ ENV+QEM
Sbjct: 673 IYNILIDGWARRGDVWEAADLLKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEM 732
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYAS 291
+ + + T++T+ + L ++A LK E++ S D Y+ L++ S
Sbjct: 733 -ADVGLKPNVKTFTTLIKGWARVSLPDRA---LKCFEEMKSAGLKPDEAAYHCLVTSLLS 788
Query: 292 LGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLV 325
E + G+ + C++ D L + V
Sbjct: 789 RATVMEGSTYTGIFSV-CREMFENDLTVDLRTAV 821
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/269 (17%), Positives = 122/269 (45%), Gaps = 2/269 (0%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
++ +L++ Y G + +LS +++MK G + + Y+ ++ Y T + ++ +
Sbjct: 288 VFTSLVHAYAVAGDMRGALSCVEEMKSEGIEMTVVTYSILISGYGKTNDAQSADNLFKEA 347
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
K + Y I+++ + E +++EME + I Y ++ + Y +
Sbjct: 348 KTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREME-EDGIDAPIDVYHSMMHGYTVVQD 406
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
++K +I ++ ++ K + Y LI+ Y +G + + + K N+ Y
Sbjct: 407 EKKCLIVFERLKECGFKPT-IISYGCLINLYVKVGKVPKAIAISKEMESHGIKHNNKTYS 465
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
++ + + + A + E+ S D + N+++ + + G +++A + + + K+
Sbjct: 466 MLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKE 525
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAFECM 407
P+ ++ I G+A +M++AF+ +
Sbjct: 526 RMQPSNRTFRPIIEGFAVAGDMKRAFDTL 554
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/288 (18%), Positives = 135/288 (46%), Gaps = 10/288 (3%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+G ++ Y + G + + + M+ G +A + ++ Y G + +MK
Sbjct: 254 FGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAGDMRGALSCVEEMK 313
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G+ +Y I I+ YG ++ S +N+ +E +++ +++ YS + + + +G
Sbjct: 314 SEGIEMTVVTYSILISGYGKTNDAQSADNLFKEAKTKLD-NLNGIIYSNIIHAHCQSGNM 372
Query: 260 EKAIIYLKKC-EDIVSKSKDALGYNHLISHYASLGN-KDEMMKFWGLQKIKCKKQLNRDY 317
++A +++ ED + D Y+ ++ Y + + K ++ F L++ K + Y
Sbjct: 373 DRAEELVREMEEDGIDAPIDV--YHSMMHGYTVVQDEKKCLIVFERLKECGFKPTII-SY 429
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
++ VK+G++ +A + +E E ++ + ++++ G+ A ++ ++++K
Sbjct: 430 GCLINLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIK 489
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKA---FECMKEALAVHEENKFWRP 422
G P ++++ + NM++A FE M++ + N+ +RP
Sbjct: 490 SGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKE-RMQPSNRTFRP 536
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/276 (19%), Positives = 123/276 (44%), Gaps = 8/276 (2%)
Query: 137 DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
+K Y L+N ++ + S+ + M + G YN ++ + G ++ +
Sbjct: 461 NKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFE 520
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
M++ + P N ++R I + ++ + L M +S + TY+ + + +
Sbjct: 521 RMQKERMQPSNRTFRPIIEGFAVAGDMKRAFDTLDLMR-RSGCAPTVMTYNALIHGLVRK 579
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
EKA+ L K I + + Y ++ YA+ G+ + +++ KIK + L D
Sbjct: 580 HQVEKAVSVLDKM-SIAGIAPNEHTYTIIMRGYAASGDIGKAFEYF--TKIK-ESGLKLD 635
Query: 317 ---YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
Y T+L + K G ++ A + E + + NI++ G++++G + +A +LK
Sbjct: 636 VYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLLK 695
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
++ + G P ++++ +M++A ++E
Sbjct: 696 QMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQE 731
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 127/267 (47%), Gaps = 7/267 (2%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y AL++ + +DE+++L++ M E G + + YN I+ + + ++ + M
Sbjct: 112 YSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMV 171
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G PD +Y I + ++ +L E+ ++ + D TYSTV + AG
Sbjct: 172 AEGCHPDIITYTALIGGFCKSRDVGRGLELLGEV-TRRGFTPDIVTYSTVIDGLCKAGRL 230
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWG-LQKIKCKKQLNRDYI 318
A+ ++ +S + A+ YN LI Y G+ DE ++ G + KC + Y
Sbjct: 231 RDAVDIFEE----MSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVV-TYT 285
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
T++ + K+G L++A ++ ++ + D ++ G +G +E A +L+EI ++
Sbjct: 286 TLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRR 345
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAFE 405
G PT +++ + GY N + KA E
Sbjct: 346 GCPPTIYTYNCVVDGYCKANQVRKAEE 372
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/369 (18%), Positives = 147/369 (39%), Gaps = 33/369 (8%)
Query: 57 LDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGK 116
++Q V EG + +I + L++ ++ +G + ++ +D + K
Sbjct: 167 MEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCK 226
Query: 117 VRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYN 176
L A F ++ Y +L+ Y R G +DE++ L+ KM + + Y
Sbjct: 227 AGRLRDAVDIFEEMSCAPTA-ITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYT 285
Query: 177 GIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQ 236
+M + G+ + ++ M N + PD ++ ++ + +L+E+ +
Sbjct: 286 TLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRR 345
Query: 237 SHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSK------DALGYNHLISHYA 290
+ TY+ V + Y A ++K E++V+ + + + YN L++
Sbjct: 346 GCPPTIY-TYNCVVDGYCKAN-------QVRKAEELVADFRSRGFVPNTVTYNILVAGCC 397
Query: 291 SLGNKDEMMKFWGLQKIKCKKQLNRD----------YITMLGSLVKIGELEEAEKMLEEW 340
G D+ +++ QLN + Y +L +L + G ++A + EE
Sbjct: 398 RAGRTDQALQYL--------DQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEM 449
Query: 341 ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNM 400
Y ++ + ++A +L+E++K G TP P + + + Y +
Sbjct: 450 IQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMI 509
Query: 401 EKAFECMKE 409
+KA E E
Sbjct: 510 QKADELASE 518
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/314 (18%), Positives = 134/314 (42%), Gaps = 27/314 (8%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG---KVRGLESAETYFNSLN 131
VI L R + A+ + E MS A + + LIG + ++ A +
Sbjct: 220 VIDGLCKAGRLRDAVDIFEEMSCAPTAITYNS------LIGGYCRAGDMDEAIRLLGKMV 273
Query: 132 DEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHE 189
D+ + Y L++ + + G +D++ L Q+M + + ++ G+ E
Sbjct: 274 DDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRME 333
Query: 190 KIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTV 249
++L ++ G PP ++Y ++ Y +++ E ++ + S+ + + TY+ +
Sbjct: 334 DALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVP-NTVTYNIL 392
Query: 250 ANYYIIAGLKEKAIIYLKKCEDIVSKSKDALG-YNHLISHYASLGNKDEMMKFWGLQKIK 308
AG ++A+ YL + ++ Y ++ G D+ ++F+
Sbjct: 393 VAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFY------ 446
Query: 309 CKKQLNRDYI-------TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQ 361
++ + R Y+ T++ +L K + ++A ++LEE + + ++ Y +
Sbjct: 447 -EEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCR 505
Query: 362 KGMIEKADAVLKEI 375
GMI+KAD + E+
Sbjct: 506 AGMIQKADELASEL 519
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/394 (19%), Positives = 177/394 (44%), Gaps = 17/394 (4%)
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDK---LY 140
RF A+++ ++M+ +G A + ++ +D + K + A YF + ++ V Y
Sbjct: 663 RFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAY 722
Query: 141 GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKE 200
AL++ + G +DE+ +++M G + ++ ++ + G+ + ++ M E
Sbjct: 723 SALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAE 782
Query: 201 NGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKE 260
G D ++Y IN+Y + E S+ +L+EM++ I+ + T+ V +
Sbjct: 783 RGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHG-IAKNTVTHGIVIKALCGNDRID 841
Query: 261 KAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITM 320
+A+ Y I +D + YN LI+ + ++ ++ +Y+T+
Sbjct: 842 EAVSYF---HSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTV 898
Query: 321 LGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGK 380
+ L K G E A K+L+E + D R I++ G S+ + A +E+++K
Sbjct: 899 MDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNL 958
Query: 381 TPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDV 440
P +S + + + ++ A++ ++ + P ++ S+++D L NR
Sbjct: 959 KPDAIVYSSLIDAFCKADKVDDAWKLLR--------SSGIEPTITMYSTMVDSLCKNRGT 1010
Query: 441 EEVEAFVSSLKIKVQKR--NMYHALTEAHIRSGQ 472
++ + +K K + +++ +L A++ G+
Sbjct: 1011 DKALEVIREMKSKNCEPGIHIWTSLATAYVAEGR 1044
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 95/458 (20%), Positives = 195/458 (42%), Gaps = 46/458 (10%)
Query: 54 TPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLD- 112
+P +D +++ + + + ++ L + AL + E+M GL+ V LD
Sbjct: 458 SPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDG 517
Query: 113 LIGKVRGLESAETYFNSLNDEDKVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGS 171
L + R L++ + +L + + + Y L++ + +DE+L L+ KM E+G +
Sbjct: 518 LCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRAN 577
Query: 172 ALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQ 231
+ Y+ ++ G+ E VL M++ G PD +Y I+ + R L +L+
Sbjct: 578 TVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLR 637
Query: 232 EM-ESQSHISMDWGTYSTVANYYIIAGLKEKAIIYL-----KKCEDIVSKSKDALGYNHL 285
EM E+ H S+ TY+T+ + +G ++A+ L + C + +A+ Y+ +
Sbjct: 638 EMLEAGFHPSVV--TYTTLCHGLCRSGRFDEAVEILDYMAARGC------APNAITYSSI 689
Query: 286 ISHYASLGNKDEMMKFWGLQKIKCKKQLNRD---------YITMLGSLVKIGELEEAEKM 336
+ G E + ++ +++ RD Y ++ L K G ++EA +
Sbjct: 690 VDGLCKAGRVTEALGYF--------EKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEF 741
Query: 337 LEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYAD 396
LE + D +I++ G G I+ + + ++G +++ + Y
Sbjct: 742 LERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCL 801
Query: 397 KNNMEKAFECMKEALAVHEENKFWRPKPSLVSS--ILDWLGDNRDVEEVEAFVSSLKIKV 454
K A+ A+ EE K + V+ ++ L N ++E ++ S+
Sbjct: 802 KGEFSAAY-------ALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDC 854
Query: 455 QKRNMYHALTEAHI---RSGQEVDGLLESMKADDIDED 489
+ Y+ L + + RS Q ++ LL +M AD D
Sbjct: 855 RDEISYNTLITSLVASRRSEQALE-LLRAMVADGGSPD 891
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 53/303 (17%), Positives = 122/303 (40%), Gaps = 13/303 (4%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +++ R+ VD+ L+++M G +A+ YN ++ G+ ++ +L M
Sbjct: 39 YSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMA 98
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
NG PP+ ++ + I E+ + V+ EM + + D ++ + + G
Sbjct: 99 ANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVP-DVEIHTVLLHALCELGRV 157
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
++A + ++ ++ + DA+ YN ++ G + L +
Sbjct: 158 DEAWFFFQQVL-LIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTI 216
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
+ L K G L A + + + + + ++ G + G ++ A +L++ K
Sbjct: 217 AVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRD---KN 273
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRD 439
++S + G + +E+A + +K V P +S+++ L R
Sbjct: 274 SQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPCV--------PNVVCFNSLMNGLCQARR 325
Query: 440 VEE 442
V+E
Sbjct: 326 VDE 328
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 74/393 (18%), Positives = 165/393 (41%), Gaps = 18/393 (4%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
+L++ G + + ++ L + R K A + E M+ G + + + +
Sbjct: 58 LLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLC 117
Query: 116 KVRGLESAETYFNSLNDEDKVD--KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
K +E+A + + D V +++ LL+ G VDE+ Q++ +G A+
Sbjct: 118 KEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAV 177
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
YN ++ G+ E VL + E+ P F++ I ++ L+ M
Sbjct: 178 TYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSM 237
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLG 293
Q+ +S + TY + + AG + A+ L+ + ++ L+
Sbjct: 238 -PQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRD----KNSQAGMFAFSSLLHGLCQAH 292
Query: 294 NKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPN 353
+E ++ L+ + C + + +++ L + ++EA ++ + + S D N
Sbjct: 293 RLEEAIQL--LKAMPCVPNV-VCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYN 349
Query: 354 IILLGYSQKGMIEKADAVLKEIVKKGKTPTPN--SWSIIAAGYADKNNMEKAFECMKEAL 411
I+L G + I +A + E++++ + +PN ++S + G + + +A+E + +
Sbjct: 350 ILLKGLCKLRRIPEAYRHV-ELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMV 408
Query: 412 AVH--EENKFWRPKPSLVSSILDWLGDNRDVEE 442
AV N+F + + L GD+R +E+
Sbjct: 409 AVEGISPNRFTY---AFLLEGLCKAGDSRRLEQ 438
>gi|224097576|ref|XP_002310993.1| predicted protein [Populus trichocarpa]
gi|222850813|gb|EEE88360.1| predicted protein [Populus trichocarpa]
Length = 877
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 144/334 (43%), Gaps = 14/334 (4%)
Query: 82 RKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL-- 139
R A Q E M +G+ S H + + R +E A + + +E L
Sbjct: 315 RGDMHRARQTFESMRVRGIYPSSHVYTSLIHAYAVGRDMEEALSCVRKMKEEGVEMSLVT 374
Query: 140 YGALLNCYVREGLVDESL------SLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPD 193
Y ++ + + G D+S SL+++M+E G Y+ +M YT G EK
Sbjct: 375 YSIVVGGFAKIGNADQSCNMDRAESLVREMEEEGIDAPIDIYHTMMNGYTMIGNEEKCLI 434
Query: 194 VLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYY 253
V +KE G P SY IN Y ++S V + MES + I + TYS + N +
Sbjct: 435 VFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKMMES-AGIKHNMKTYSMLINGF 493
Query: 254 IIAGLKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKK 311
+ A ED++ D + YN++I + +GN D + + K +
Sbjct: 494 LKLKDWTNAFTVF---EDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKKRHR 550
Query: 312 QLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAV 371
+R ++ ++ + GE+ A ++ + S N ++LG +K +EKA +
Sbjct: 551 PTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEI 610
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
L E+ G +P ++++ I GYA + KAFE
Sbjct: 611 LDEMALAGVSPDEHTYTTIMNGYAALGDTGKAFE 644
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/327 (18%), Positives = 142/327 (43%), Gaps = 10/327 (3%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYF-NSLNDEDKVDK-LYGALLN 145
AL+VS+ M G+ ++ +++ ++ K++ +A T F + + D K D LY ++
Sbjct: 467 ALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIK 526
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
+ G +D ++ ++++M++ ++ + I+ + G+ + ++ M+ +G P
Sbjct: 527 AFCGMGNMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIP 586
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
++ + + ++ +L EM + + +S D TY+T+ N Y G KA Y
Sbjct: 587 TVHTFNALVLGLVEKRQMEKAVEILDEM-ALAGVSPDEHTYTTIMNGYAALGDTGKAFEY 645
Query: 266 LKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD---YITMLG 322
K + D Y L+ G M + + + + R+ Y ++
Sbjct: 646 FTKLRN-EGLELDVFTYEALLKACCKSG---RMQSALAVTREMSAQNIPRNTFVYNILID 701
Query: 323 SLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTP 382
+ G++ EA ++++ + D + + G + +A ++E+ G P
Sbjct: 702 GWARRGDVWEAADLMQQMKQEGVQPDIHTYTSFINACCKAGDMLRATKTIQEMEALGVKP 761
Query: 383 TPNSWSIIAAGYADKNNMEKAFECMKE 409
+++ + G+A + EKA C +E
Sbjct: 762 NVKTYTTLIHGWACASLPEKALRCFEE 788
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 114/249 (45%), Gaps = 5/249 (2%)
Query: 79 LRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED-KVD 137
L +++ + A+++ + M+ G++ H + ++ + A YF L +E ++D
Sbjct: 598 LVEKRQMEKAVEILDEMALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLRNEGLELD 657
Query: 138 KL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
Y ALL + G + +L++ ++M + YN ++ + G + D++
Sbjct: 658 VFTYEALLKACCKSGRMQSALAVTREMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQ 717
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
MK+ GV PD +Y IN+ ++ +QEME+ + + TY+T+ + + A
Sbjct: 718 QMKQEGVQPDIHTYTSFINACCKAGDMLRATKTIQEMEALG-VKPNVKTYTTLIHGWACA 776
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
L EKA+ ++ + + D Y+ L++ S E + G+ I C++ + +
Sbjct: 777 SLPEKALRCFEEMK-LAGLKPDKAVYHCLMTSLLSRATVAEAYIYSGILSI-CREMIESE 834
Query: 317 YITMLGSLV 325
+G+ V
Sbjct: 835 LTVDMGTAV 843
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 92/417 (22%), Positives = 182/417 (43%), Gaps = 19/417 (4%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I L +++ AL+V M +G ++ + +D +GK + A + D
Sbjct: 50 LINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNG 109
Query: 135 KVD--KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
V + Y L++ + G + E+ +L +M+E G YN ++ G+ +K
Sbjct: 110 CVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAM 169
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
++L +M+ +G PPD +Y I G E + QEM+ + D T++ + +
Sbjct: 170 ELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGR-KPDSITFTALMDA 228
Query: 253 YIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWG-LQKIKCKK 311
AG + A+ L + ++ K + YN LI+ + +G+ E +++ CK
Sbjct: 229 LGKAGRVDDALELLDEMKERGVKP-GVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKP 287
Query: 312 QLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAV 371
+ Y ++ L+K +L+EA ++L++ E D N ++ G + G++ A +
Sbjct: 288 DV-VTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRL 346
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVS--S 429
+ KG P ++S + +E A C+ + EE + +P L + S
Sbjct: 347 FDRMKSKGCNPDVVTYSTLITALGKAARVESA--CV-----LFEEMESVGIQPDLFTYCS 399
Query: 430 ILDWLGDNRDVEEVEAFVSSLKIKVQKRNM--YHALTEAHIRSGQ--EVDGLLESMK 482
I+ LG V++ + S ++ K ++ Y+A + R G+ E + E MK
Sbjct: 400 IITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMK 456
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 177/440 (40%), Gaps = 52/440 (11%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I L R + A+++ E M G V ++ + +GK A F +
Sbjct: 155 LIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRG 214
Query: 135 -KVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
K D + + AL++ + G VD++L L+ +MKE G + YN ++ + G +
Sbjct: 215 RKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAY 274
Query: 193 DVLLDMKENG-----------------------------------VPPDNFSYRICINSY 217
++L +MK NG PPD +Y IN
Sbjct: 275 NLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGL 334
Query: 218 GARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSK 277
G L+ + M+S+ + D TYST+ A E A + ++ E V
Sbjct: 335 GKAGLLNDAGRLFDRMKSKG-CNPDVVTYSTLITALGKAARVESACVLFEEMES-VGIQP 392
Query: 278 DALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT---MLGSLVKIGELEEAE 334
D Y +I+ G D+ + + + K L+ D IT L SL + G +EA
Sbjct: 393 DLFTYCSIITVLGKAGQVDDADRLFSEMR---GKGLSPDVITYNAFLNSLGRGGRFKEAR 449
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGY 394
K+ E+ + S D + +LLG S+ ++ A +LKE++++G +
Sbjct: 450 KIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEIL 509
Query: 395 ADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKV 454
N+++A E ++ A W P S ++++D L V E + LK +
Sbjct: 510 TSWGNVDEAHELLQFA----NSKGLW-PGASSYNALIDALAKAGRVSEAFNTLEDLKEQG 564
Query: 455 QKRNM--YHALTEAHIRSGQ 472
K ++ Y +L A ++GQ
Sbjct: 565 GKPDIVSYSSLISALGQTGQ 584
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 126/270 (46%), Gaps = 2/270 (0%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+N R G + +L ++ +M+ G + YN ++ GQ ++ +L +M+
Sbjct: 47 YSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMR 106
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+NG PD +Y I++ G LS + EM + + D TY+++ G
Sbjct: 107 DNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVP-DTFTYNSLIYGLGKVGRS 165
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
+KA+ L++ E D + Y+ LI+ G + K + K + +K + +
Sbjct: 166 QKAMELLEEMER-HGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTA 224
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
++ +L K G +++A ++L+E + N ++ G+ + G + +A +L E+ + G
Sbjct: 225 LMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNG 284
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
P ++S + G + +++A + +K+
Sbjct: 285 CKPDVVTYSCLITGLIKASQLDEACQVLKK 314
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 149/375 (39%), Gaps = 29/375 (7%)
Query: 29 RAVKP--VARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFK 86
R VKP V N L + +GD V +LD+ G K + +I L +
Sbjct: 248 RGVKPGVVTYNALIAGFGKVGDL-VEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLD 306
Query: 87 HALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLN----DEDKVDKLYGA 142
A QV + M +G + ++ +GK L A F+ + + D V Y
Sbjct: 307 EACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVT--YST 364
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
L+ + V+ + L ++M+ +G Y I+ + GQ + + +M+ G
Sbjct: 365 LITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKG 424
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
+ PD +Y +NS G + ++M+ +S + D TY ++ GL +
Sbjct: 425 LSPDVITYNAFLNSLGRGGRFKEARKIFEDMK-ESGLLPDVATYDA-----LLLGLSKT- 477
Query: 263 IIYLKKCEDIVSKSK---------DALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQL 313
K+ +D K D+L ++ + S GN DE + K
Sbjct: 478 ----KEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPG 533
Query: 314 NRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
Y ++ +L K G + EA LE+ + D + ++ Q G I+ A +L+
Sbjct: 534 ASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLE 593
Query: 374 EIVKKGKTPTPNSWS 388
E+ K+G +P S+S
Sbjct: 594 EMSKRGLKLSPRSYS 608
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 128/304 (42%), Gaps = 13/304 (4%)
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQE 232
+ YN ++ GQ E+ + ++K PD SY INS G + + V+ E
Sbjct: 10 VTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAE 69
Query: 233 MESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASL 292
M+++ W TY+T+ + AG ++A+ L + D D YN LIS
Sbjct: 70 MQAKGCKPNLW-TYNTLVDCLGKAGQFDEALRLLAEMRD-NGCVPDVRTYNCLISTLGKA 127
Query: 293 GNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVP 352
G E + + + Y +++ L K+G ++A ++LEE E D
Sbjct: 128 GRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTY 187
Query: 353 NIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
+ ++ G + G KA + +E+ ++G+ P +++ + ++ A E +
Sbjct: 188 SSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELL----- 242
Query: 413 VHEENKFWRPKPSLVS--SILDWLGDNRDVEEVEAFVSSLKIKVQKRNM--YHALTEAHI 468
+E K KP +V+ +++ G D+ E + +K K ++ Y L I
Sbjct: 243 --DEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLI 300
Query: 469 RSGQ 472
++ Q
Sbjct: 301 KASQ 304
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 146/309 (47%), Gaps = 13/309 (4%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ++ V +G +++ L M+KM++ G + + YN ++ + ++ +L M
Sbjct: 210 YNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMA 269
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
GV + SY IN + +S + +++EM + + D TY+T+ N + G
Sbjct: 270 VGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVP-DEVTYNTLVNGFCKEGNL 328
Query: 260 EKAIIYLKKCEDIVSK--SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
+ ++ L ++V K S + + Y LI+ GN ++ + +++ + R Y
Sbjct: 329 HQGLVLL---SEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTY 385
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
T++ + G + EA K+L E +S + N ++ GY G +++A +L+ +V+
Sbjct: 386 TTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVE 445
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDN 437
+G P S+S + AG+ + + KAF+ MKE + K P SS++ L
Sbjct: 446 RGLPPDVVSYSTVIAGFCRERELGKAFQ-MKEEMV----EKGVLPDTVTYSSLIQGLCLQ 500
Query: 438 RDVEEVEAF 446
+ + VEAF
Sbjct: 501 QKL--VEAF 507
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 149/331 (45%), Gaps = 27/331 (8%)
Query: 95 MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED--KVDKLYGALLNCYVREGL 152
M G+GL+ +V + ++ + K L A F+ + ++ Y L++ + ++GL
Sbjct: 338 MVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGL 397
Query: 153 VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
++E+ ++ +M G S + YN ++ Y G+ ++ +L M E G+PPD SY
Sbjct: 398 MNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYST 457
Query: 213 CINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG--LKEKAIIYLKKCE 270
I + EL + +EM + + D TYS+ +I G L++K +
Sbjct: 458 VIAGFCRERELGKAFQMKEEMVEKGVLP-DTVTYSS-----LIQGLCLQQKLVEAFDLFR 511
Query: 271 DIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIG 328
+++ + D + Y LI+ Y G + ++ + N Y ++ L K
Sbjct: 512 EMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKA 571
Query: 329 ELEEAEKMLEE--WELS-------------CYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
+ A+++L + +E S C +F+ ++ G+ KG++ +AD V K
Sbjct: 572 RTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFK 631
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
++++ P ++++ G++ N+ KA+
Sbjct: 632 TMLQRNHKPNAAIYNLMIHGHSRGGNVHKAY 662
>gi|224113413|ref|XP_002316488.1| predicted protein [Populus trichocarpa]
gi|222865528|gb|EEF02659.1| predicted protein [Populus trichocarpa]
Length = 941
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 146/323 (45%), Gaps = 10/323 (3%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV--DKLYGALLN 145
AL M+ +G+ S+ +++ + K E+A+ +F + +YG ++
Sbjct: 348 ALSCVRKMNEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNIIY 407
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
Y + +D + +L+++M+E G Y+ +M YT EK V +KE G P
Sbjct: 408 AYCQACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLKECGFAP 467
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
+Y IN Y ++S V + M+S I + TYS + N ++ A
Sbjct: 468 SVITYGCLINMYTKIGKVSKALEVSKMMKSVG-IKHNMKTYSMLINGFLKLKDWTNAFAV 526
Query: 266 LKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWG-LQKIKCKKQLNRDYITMLG 322
ED++ D + YN++I + +GN D + +QK +C+ +R ++ ++
Sbjct: 527 F---EDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPT-SRTFMPIIH 582
Query: 323 SLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTP 382
+ GE+ A ++ + S N ++LG +K +EKA +L E+ G +P
Sbjct: 583 GFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSP 642
Query: 383 TPNSWSIIAAGYADKNNMEKAFE 405
++++ I GYA + KAFE
Sbjct: 643 DEHTYTTIMHGYAALGDTGKAFE 665
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/255 (18%), Positives = 107/255 (41%), Gaps = 18/255 (7%)
Query: 136 VDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVL 195
+ + +++ + R G + +L + M+ G + +N ++ + EK ++L
Sbjct: 573 TSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEIL 632
Query: 196 LDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYII 255
+M GV PD +Y ++ Y A + +M ++ + +D TY +
Sbjct: 633 DEMALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEG-LQLDVFTYEALLKACCK 691
Query: 256 AGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR 315
+G + A+ ++ + ++ YN LI +A G+ W + +Q+N+
Sbjct: 692 SGRMQSALAVTREM-NAQKIPRNTFVYNILIDGWARRGD------IW--EAADLMQQMNQ 742
Query: 316 D--------YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEK 367
+ Y + + + K G++ A K +EE E + + + ++ G++ + EK
Sbjct: 743 EGVQPDIHTYTSFINACCKAGDMLRATKTMEEMEAAGVKPNVKTYTTLIHGWANASLPEK 802
Query: 368 ADAVLKEIVKKGKTP 382
A + +E+ G P
Sbjct: 803 ALSCFEELKLAGLKP 817
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/327 (18%), Positives = 142/327 (43%), Gaps = 10/327 (3%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYF-NSLNDEDKVDK-LYGALLN 145
AL+VS+ M G+ ++ +++ ++ K++ +A F + + D K D LY ++
Sbjct: 488 ALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKDGLKPDVVLYNNIIK 547
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
+ G +D ++ ++++M++ ++ + I+ + G+ + ++ M+ +G P
Sbjct: 548 AFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIP 607
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
++ + + ++ +L EM + + +S D TY+T+ + Y G KA Y
Sbjct: 608 TVHTFNALVLGLVEKRKMEKAVEILDEM-ALAGVSPDEHTYTTIMHGYAALGDTGKAFEY 666
Query: 266 LKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD---YITMLG 322
K + D Y L+ G M + + +++ R+ Y ++
Sbjct: 667 FTKMRN-EGLQLDVFTYEALLKACCKSG---RMQSALAVTREMNAQKIPRNTFVYNILID 722
Query: 323 SLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTP 382
+ G++ EA ++++ D + + G + +A ++E+ G P
Sbjct: 723 GWARRGDIWEAADLMQQMNQEGVQPDIHTYTSFINACCKAGDMLRATKTMEEMEAAGVKP 782
Query: 383 TPNSWSIIAAGYADKNNMEKAFECMKE 409
+++ + G+A+ + EKA C +E
Sbjct: 783 NVKTYTTLIHGWANASLPEKALSCFEE 809
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/292 (18%), Positives = 127/292 (43%), Gaps = 21/292 (7%)
Query: 52 SLTPVLDQWVLEGQKISELELQRVIRQ----------------LRSRKRFKHALQVSEWM 95
+ P++ + G+ LE+ ++R+ L +++ + A+++ + M
Sbjct: 576 TFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEM 635
Query: 96 SGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED-KVDKL-YGALLNCYVREGLV 153
+ G++ H + + + A YF + +E ++D Y ALL + G +
Sbjct: 636 ALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRM 695
Query: 154 DESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRIC 213
+L++ ++M + YN ++ + G + D++ M + GV PD +Y
Sbjct: 696 QSALAVTREMNAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQMNQEGVQPDIHTYTSF 755
Query: 214 INSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIV 273
IN+ ++ ++EME+ + + + TY+T+ + + A L EKA+ ++ + +
Sbjct: 756 INACCKAGDMLRATKTMEEMEA-AGVKPNVKTYTTLIHGWANASLPEKALSCFEELK-LA 813
Query: 274 SKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLV 325
D Y+ L++ S E + G+ I C++ + + +G+ V
Sbjct: 814 GLKPDKAVYHCLMTSLLSRATVAEAYIYSGILSI-CREMIEFELTVDMGTAV 864
>gi|326528911|dbj|BAJ97477.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 913
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 152/327 (46%), Gaps = 14/327 (4%)
Query: 86 KHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYF----NSLNDEDKVDKLYG 141
+ AL +E M +G+ ++ +++ + GK+ +SA+ F +L D + + +Y
Sbjct: 329 RGALSCTEEMKAEGIELTIVTYSILISGFGKINDTQSADNLFKEAKTNLGDLNGI--IYS 386
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
+++ + + G +D + L+ +M+E G Y+ +M YT +K V +KE
Sbjct: 387 NIIHAHCQSGNMDRAEELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKEC 446
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYI-IAGLKE 260
P SY IN Y +++ + +EMES S I + TYS + + +I +
Sbjct: 447 CFTPSIISYGCLINLYVKIGKVAKAIAISKEMES-SGIKHNNKTYSMLISGFIHLHDFTN 505
Query: 261 KAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
I+ E+++ D YN LI + +GN D ++ + + + NR +
Sbjct: 506 AFRIF----EEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFR 561
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
++ G+++ A +L+ S N ++ G +K +E+A +VL ++
Sbjct: 562 PIIEGFAVAGDMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIA 621
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAFE 405
G TP ++++II GYA ++ KAFE
Sbjct: 622 GITPNEHTYTIIMRGYAATGDIAKAFE 648
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 124/290 (42%), Gaps = 11/290 (3%)
Query: 29 RAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHA 88
RA +P+ + GD +L +LD G + + +I L + + + A
Sbjct: 558 RAFRPIIEG-----FAVAGDMKRALD-ILDLMRRSGCAPTVMTYNALIHGLIRKNQVERA 611
Query: 89 LQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED-KVD-KLYGALLNC 146
+ V MS G+ + H + + + + A YF + + K+D +Y LL
Sbjct: 612 VSVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRA 671
Query: 147 YVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPD 206
+ G + +L++ ++M + YN ++ + G + D++ MKE+GVPP+
Sbjct: 672 CCKSGRMQSALAVTREMSSQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPN 731
Query: 207 NFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYL 266
+Y IN+ ++ + V+ EM S + + TY+T+ + A L ++A+
Sbjct: 732 IHTYTSYINACCKAGDMQRAQTVIDEM-SDVGLKPNLKTYTTLIKGWARASLPDRALKCF 790
Query: 267 KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
++ + + D Y+ L++ S E + G+ + C++ D
Sbjct: 791 EEMK-LAGLKPDEAAYHCLVTSLLSRATVMEGSTYTGILSV-CREMFEND 838
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/302 (19%), Positives = 130/302 (43%), Gaps = 43/302 (14%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMG-------------------SFGSALN------ 174
YG L+N YV+ G V +++++ ++M+ G F +A
Sbjct: 455 YGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEML 514
Query: 175 ----------YNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELS 224
YN ++ + G ++ +L M++ + P N ++R I + ++
Sbjct: 515 KSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMK 574
Query: 225 SMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNH 284
++L M +S + TY+ + + I E+A+ L K I + + Y
Sbjct: 575 RALDILDLMR-RSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMS-IAGITPNEHTYTI 632
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRD---YITMLGSLVKIGELEEAEKMLEEWE 341
++ YA+ G+ + +++ KIK + L D Y T+L + K G ++ A + E
Sbjct: 633 IMRGYAATGDIAKAFEYF--TKIK-EGGLKLDVYIYETLLRACCKSGRMQSALAVTREMS 689
Query: 342 LSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNME 401
+ V NI++ G++++G + +A ++K++ + G P ++++ +M+
Sbjct: 690 SQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQ 749
Query: 402 KA 403
+A
Sbjct: 750 RA 751
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 50/286 (17%), Positives = 126/286 (44%), Gaps = 6/286 (2%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+G ++ Y + G + + + M+ G +A + ++ Y +MK
Sbjct: 280 FGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCTEEMK 339
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G+ +Y I I+ +G ++ S +N+ +E ++ ++ YS + + + +G
Sbjct: 340 AEGIELTIVTYSILISGFGKINDTQSADNLFKEAKTNLG-DLNGIIYSNIIHAHCQSGNM 398
Query: 260 EKAIIYLKKCE-DIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
++A + + E D + DA Y+ ++ Y + ++ + + + K C Y
Sbjct: 399 DRAEELVHEMEEDGIDAPIDA--YHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYG 456
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
++ VKIG++ +A + +E E S ++ + ++++ G+ A + +E++K
Sbjct: 457 CLINLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKS 516
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAFECMK--EALAVHEENKFWRP 422
G P ++++ + NM++A ++ + + N+ +RP
Sbjct: 517 GLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRP 562
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 154/359 (42%), Gaps = 12/359 (3%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLD-LIGKVRGLESAETYFNSLNDEDKVDKL--YGALL 144
AL + G V + LD I R + AE F + + + Y L+
Sbjct: 153 ALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILI 212
Query: 145 NCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVP 204
+ G +D +L+L KM+ G + + YN ++ Y + + +L M G+
Sbjct: 213 RGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLE 272
Query: 205 PDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG-LKEKAI 263
P+ SY + IN + + VL EM + + S+D TY+T+ Y G + +
Sbjct: 273 PNLISYNVVINGLCREGRMKEVSFVLTEMNRRGY-SLDEVTYNTLIKGYCKEGNFHQALV 331
Query: 264 IYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGS 323
++ + ++ S + Y LI GN + M+F +++ R Y T++
Sbjct: 332 MHAEMLRHGLTPS--VITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDG 389
Query: 324 LVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPT 383
+ G + EA ++L E + + N ++ G+ G +E A AVL+++ +KG +P
Sbjct: 390 FSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPD 449
Query: 384 PNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEE 442
S+S + +G+ ++++A +E + K +P SS++ + R +E
Sbjct: 450 VVSYSTVLSGFCRSYDVDEALRVKREMV-----EKGIKPDTITYSSLIQGFCEQRRTKE 503
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 165/380 (43%), Gaps = 37/380 (9%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
VL + G + E+ +I+ F AL + M GL SV + + +
Sbjct: 297 VLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMC 356
Query: 116 KVRGLESAETYFNSLNDEDKV--DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
K + A + + + ++ Y L++ + ++G ++E+ ++++M + G S +
Sbjct: 357 KAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVV 416
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
YN ++ + TG+ E VL DMKE G+ PD SY ++ + ++ V +EM
Sbjct: 417 TYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREM 476
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDI------VSKSKDALGYNHLIS 287
+ I D TYS+ +I G E+ K+ D+ V D Y LI+
Sbjct: 477 VEKG-IKPDTITYSS-----LIQGFCEQR--RTKEACDLYEEMLRVGLPPDEFTYTALIN 528
Query: 288 HYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT---MLGSLVKIGELEEAEKML-----EE 339
Y G+ ++ ++ L +K + D +T ++ L K EA+++L EE
Sbjct: 529 AYCMEGDLEKALQ---LHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEE 585
Query: 340 WELS----------CYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSI 389
S C +F+ ++ G+ KGM+ +AD V + ++ K P +++I
Sbjct: 586 SVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNI 645
Query: 390 IAAGYADKNNMEKAFECMKE 409
+ G+ ++ KA+ KE
Sbjct: 646 MIHGHCRAGDIRKAYTLYKE 665
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/372 (21%), Positives = 158/372 (42%), Gaps = 49/372 (13%)
Query: 112 DLIGKVRGLESAETYFNSLNDEDKV----DKLYGALLNCYVREGLVDESLSLMQKMKEMG 167
D+ K E A F SL + + ++ ++ Y R L+D++LS++ + G
Sbjct: 105 DVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHG 164
Query: 168 SFGSALNYNGIMCLYTNTGQHEKIP-DVLLDMKENGVPPDNFSYRICINSYGARSELSSM 226
L+YN ++ + ++ +V +M E+ V P+ F+Y I I + +
Sbjct: 165 FMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVA 224
Query: 227 ENVLQEMESQSHISMDWGTYSTVANYYI----------------IAGLKEKAIIY----- 265
+ +ME++ + + TY+T+ + Y + GL+ I Y
Sbjct: 225 LTLFDKMETKGCLP-NVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 266 -------LKKCEDIVSK------SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQ 312
+K+ ++++ S D + YN LI Y GN + +
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343
Query: 313 LNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
Y +++ S+ K G + A + L++ + C + R ++ G+SQKG + +A VL
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLV--SSI 430
+E+ G +P+ +++ + G+ ME +A+AV E+ K P +V S++
Sbjct: 404 REMNDNGFSPSVVTYNALINGHCVTGKME-------DAIAVLEDMKEKGLSPDVVSYSTV 456
Query: 431 LDWLGDNRDVEE 442
L + DV+E
Sbjct: 457 LSGFCRSYDVDE 468
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 139/306 (45%), Gaps = 11/306 (3%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+ + G ++ L +M+ G + + YN I+ Y + + +L M
Sbjct: 206 YNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMA 265
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G+ P+ SY + IN ++ +L+EM + ++ D T++T+ N Y G
Sbjct: 266 LKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVP-DRVTFNTLINGYCNVGNF 324
Query: 260 EKAIIYLKKCEDIVSK--SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
+A++ ++V S + + Y LI+ GN + M+F + + R Y
Sbjct: 325 HQALVLHA---EMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTY 381
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
T++ + G L++A ++++E + + N ++ G+ G +E A +L+E+++
Sbjct: 382 TTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIE 441
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDN 437
+G P S+S I +G+ +EKAF+ E +A K P + SS++ L
Sbjct: 442 RGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVA-----KGISPDVATYSSLIQGLCKQ 496
Query: 438 RDVEEV 443
R + EV
Sbjct: 497 RRLGEV 502
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 161/353 (45%), Gaps = 37/353 (10%)
Query: 85 FKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE--DKVDKLYGA 142
F AL + M GL+ +V + ++ + K L A + + + D + Y
Sbjct: 324 FHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTT 383
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
L++ + ++G + ++ +M++M E G + + YN ++ + G+ E +L +M E G
Sbjct: 384 LIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERG 443
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
PD SY I+ + EL + EM ++ IS D TYS+ +I GL ++
Sbjct: 444 FIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKG-ISPDVATYSS-----LIQGLCKQR 497
Query: 263 IIYLKKCEDIVSK------SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
L + D+ + D + Y LI+ Y G+ D+ ++ L +K + D
Sbjct: 498 --RLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALR---LHDEMIQKGFSPD 552
Query: 317 YIT---MLGSLVKIGELEEAEKMLEE--WELS-------------CYCYDFRVPNIILLG 358
+T ++ K +EA+++L + +E S C +F+ ++ G
Sbjct: 553 IVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKG 612
Query: 359 YSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
+ KG++ +AD VL+ +++KG +++I G++ N+EKA+ KE L
Sbjct: 613 FCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEML 665
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 127/269 (47%), Gaps = 23/269 (8%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y AL+N + G ++++ L+Q+M E G ++Y+ I+ + + EK + ++M
Sbjct: 416 YNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMV 475
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G+ PD +Y I + L + ++ QEM S + D TY+++ N Y I G
Sbjct: 476 AKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLG-LPPDEVTYTSLINAYCIEGDL 534
Query: 260 EKAIIYLKKCEDIVSK--SKDALGYNHLISHYASLGNKDE----MMKFWGLQKI------ 307
+KA L+ ++++ K S D + YN LI+ + E ++K + +
Sbjct: 535 DKA---LRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITY 591
Query: 308 -----KCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQK 362
C + + ++ G + EA+++LE Y + V N+I+ G+S+
Sbjct: 592 NTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKV 651
Query: 363 GMIEKADAVLKEIVKKGKTPTPNSWSIIA 391
G IEKA + KE++ G P+S +I+A
Sbjct: 652 GNIEKAYNLYKEMLHSGF--APHSVTIMA 678
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/370 (20%), Positives = 138/370 (37%), Gaps = 51/370 (13%)
Query: 121 ESAETYFNSLNDEDKVDKLYGALLNCYV----REGLVDESLSLMQKMKEMGSFGSALNYN 176
E+ E F L + K A+ + V R L++++LS++ K G L+YN
Sbjct: 112 ETGEDLFQCLKNSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYN 171
Query: 177 GIMCLYTNTGQHEKIPD-VLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMES 235
I+ T Q KI + + +M E+GV P+ ++Y I I + L EME
Sbjct: 172 AILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMER 231
Query: 236 QSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNK 295
+ + + YN +I Y L
Sbjct: 232 NGCLP-------------------------------------NVVTYNTIIDAYCKLRKI 254
Query: 296 DEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNII 355
E K L +K Y ++ L + G+++E ++LEE Y D N +
Sbjct: 255 GEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTL 314
Query: 356 LLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHE 415
+ GY G +A + E+VK G +P +++ + N+ +A E + +
Sbjct: 315 INGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQM----- 369
Query: 416 ENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNM--YHALTEAHIRSG-- 471
++ P ++++D +++ + + + Y+AL H G
Sbjct: 370 RDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRM 429
Query: 472 QEVDGLLESM 481
++ GLL+ M
Sbjct: 430 EDASGLLQEM 439
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/340 (19%), Positives = 148/340 (43%), Gaps = 10/340 (2%)
Query: 79 LRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDK 138
+R+++ K A + + M G++ +V+ + + + LE +F + +
Sbjct: 178 IRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPN 237
Query: 139 L--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
+ Y +++ Y + + E+ L++ M G + ++YN ++ GQ ++ ++L
Sbjct: 238 VVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILE 297
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
+M + PD ++ IN Y + EM ++ +S + TY+T+ N A
Sbjct: 298 EMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEM-VKNGLSPNVVTYTTLINSMCKA 356
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
G +A+ +L + D + Y LI ++ G + + + + K +
Sbjct: 357 GNLNRAMEFLDQMRD-RGLHPNGRTYTTLIDGFSQQG---FLKQAYQIMKEMVENGFTPT 412
Query: 317 YIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
IT ++ +G +E+A +L+E + D + I+ G+ + +EKA +
Sbjct: 413 IITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKV 472
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAV 413
E+V KG +P ++S + G + + + + +E L++
Sbjct: 473 EMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSL 512
>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 154/330 (46%), Gaps = 15/330 (4%)
Query: 89 LQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED--KVDKLYGALLNC 146
L++ + M +GL F + L G+ ++ A +F+ L E Y ALL+
Sbjct: 278 LELLDEMRSRGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGTVTYNALLHV 337
Query: 147 YVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPD 206
+ + G+ E+LS++ +M+E A+ YN ++ Y G HE+ V+ M G+ P+
Sbjct: 338 FGKAGIFSEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMASKGIMPN 397
Query: 207 NFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYL 266
+Y IN+YG ++ + +M M+ G VA Y + G+ K +
Sbjct: 398 AVTYTTIINAYGRVGDIDKALEMFDQM-------MELGCVPNVATYNAVLGMLGKKSLSE 450
Query: 267 KKCEDIVSKSKDALGYNHLI-SHYASLGNKDEMMKFWG--LQKIK-CKKQLNRD-YITML 321
+ + + + NH+ + ++ K M K+ +++K C + +RD + T++
Sbjct: 451 EMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLI 510
Query: 322 GSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKT 381
+ + G +A KM EE + + N +L +++G + A++V+ ++ KG
Sbjct: 511 SAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNALARRGDWKAAESVILDMRNKGFR 570
Query: 382 PTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
P+ S+S++ YA N+ K E +++++
Sbjct: 571 PSETSYSLMVHSYAKGGNV-KGIEMIEKSI 599
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/319 (20%), Positives = 138/319 (43%), Gaps = 21/319 (6%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALN-YNGIMCLYTNTGQHEKIPDVLLDM 198
+ L++ Y R G +++ + ++M + G F +N YN ++ G + V+LDM
Sbjct: 506 FNTLISAYGRCGSNNDAAKMHEEMIKAG-FSPCINTYNALLNALARRGDWKAAESVILDM 564
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
+ G P SY + ++SY + +E ++++ I W T+ ++A
Sbjct: 565 RNKGFRPSETSYSLMVHSYAKGGNVKGIE-MIEKSIYDGDIFPSWMLLRTL----VLANF 619
Query: 259 KEKAIIYLKKCEDIVSK---SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR 315
K +++ +++ + K D + N ++S +A D + + ++ L
Sbjct: 620 KCRSLTGMERAFQALQKHGYKPDLVLCNSMLSIFAKNNMYDRAHE---MLRLIHDAGLQP 676
Query: 316 DYIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
D +T ++ + G+ +AE++L + S D N ++ G+ +KG++++ +L
Sbjct: 677 DLVTHNSLMDMYARGGDCWKAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRIL 736
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILD 432
E+ G P +++ +GYA + + + + + VH RP + D
Sbjct: 737 SEMTSIGVGPCIFTYNTFISGYAAQGMFTEINDVI-SYMIVHN----CRPNELTYKIVAD 791
Query: 433 WLGDNRDVEEVEAFVSSLK 451
R +E FVS +K
Sbjct: 792 GYCKARRYDEAIDFVSKIK 810
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 109/278 (39%), Gaps = 41/278 (14%)
Query: 175 YNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEME 234
Y I+ Y+ TG++ + ++ M E+G+ P +Y + ++ YG S + +L+ ++
Sbjct: 225 YTTILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVMLDVYGKMGR--SWDKILELLD 282
Query: 235 SQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGN 294
+D+ ++ C ++S A G LI
Sbjct: 283 EMRSRGLDFDEFT---------------------CSTVLS----ACGREGLI-------- 309
Query: 295 KDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNI 354
DE +F+ K + K Y +L K G EA +L E E + D N
Sbjct: 310 -DEAREFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNE 368
Query: 355 ILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVH 414
++ Y + G E+ V+ + KG P +++ I Y +++KA E + + +
Sbjct: 369 VVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELG 428
Query: 415 EENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKI 452
P + +++L LG EE+ + +K+
Sbjct: 429 -----CVPNVATYNAVLGMLGKKSLSEEMMKILGHMKL 461
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 66/133 (49%), Gaps = 1/133 (0%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ +L++ Y R G ++ +++ ++ G ++YN ++ + G ++ +L +M
Sbjct: 681 HNSLMDMYARGGDCWKAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEMT 740
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
GV P F+Y I+ Y A+ + + +V+ M + + TY VA+ Y A
Sbjct: 741 SIGVGPCIFTYNTFISGYAAQGMFTEINDVISYMIVHNCRPNEL-TYKIVADGYCKARRY 799
Query: 260 EKAIIYLKKCEDI 272
++AI ++ K +D+
Sbjct: 800 DEAIDFVSKIKDV 812
Score = 38.5 bits (88), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 63/145 (43%), Gaps = 3/145 (2%)
Query: 116 KVRGLESAETYFNSLNDED-KVD-KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
K R L E F +L K D L ++L+ + + + D + +++ + + G +
Sbjct: 620 KCRSLTGMERAFQALQKHGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLV 679
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
+N +M +Y G K +VL ++ +G PD SY I + + + +L EM
Sbjct: 680 THNSLMDMYARGGDCWKAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEM 739
Query: 234 ESQSHISMDWGTYSTVANYYIIAGL 258
S + TY+T + Y G+
Sbjct: 740 TSIG-VGPCIFTYNTFISGYAAQGM 763
>gi|225464410|ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic [Vitis vinifera]
Length = 929
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 147/322 (45%), Gaps = 8/322 (2%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDK--LYGALLN 145
AL M +G+ S+ +++ + K+ E+A+ +F + +YG ++
Sbjct: 343 ALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIY 402
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
+ + + ++ +L+++M+E G Y+ +M YT G EK V +KE G P
Sbjct: 403 AHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTP 462
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
SY IN Y ++S V + ME I + TYS + N ++ LK+ A +
Sbjct: 463 SVISYGCLINLYIKIGKVSKALEVSKMMEVAG-IKHNMKTYSMLINGFV--RLKDWANAF 519
Query: 266 LKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGS 323
ED+V D + YN++I + +GN D ++ + + + R ++ ++
Sbjct: 520 -AVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHG 578
Query: 324 LVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPT 383
+ G++ A ++ + S N ++LG +K +EKA +L E+ G +P
Sbjct: 579 FARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPN 638
Query: 384 PNSWSIIAAGYADKNNMEKAFE 405
++++ I GYA + KAFE
Sbjct: 639 EHTYTTIMHGYASLGDTGKAFE 660
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 115/253 (45%), Gaps = 5/253 (1%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I L + + + A+++ + MS G++ + H + + + A YF L E
Sbjct: 610 LILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEG 669
Query: 135 -KVD-KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
++D Y ALL + G + +L++ ++M + YN ++ + G +
Sbjct: 670 LELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAA 729
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
+++ MK+ GV PD +Y IN+ ++ +QEME + + TY+T+ +
Sbjct: 730 ELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVG-VKPNIKTYTTLIHG 788
Query: 253 YIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQ 312
+ A L EKA+ ++ + K A+ Y+ L++ S + E + G+ I C++
Sbjct: 789 WARASLPEKALKCFQEMKSAGLKPDKAV-YHCLMTSLLSRASVAEEYIYSGVVGI-CREM 846
Query: 313 LNRDYITMLGSLV 325
+ + +G+ V
Sbjct: 847 IECELTVDMGTAV 859
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/327 (18%), Positives = 143/327 (43%), Gaps = 10/327 (3%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYF-NSLNDEDKVDK-LYGALLN 145
AL+VS+ M G+ ++ +++ ++ +++ +A F + + D K D LY ++
Sbjct: 483 ALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIR 542
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
+ G +D ++ +++M++ + + I+ + +G + ++ M+ +G P
Sbjct: 543 AFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIP 602
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
++ I + ++ +L EM S + IS + TY+T+ + Y G KA Y
Sbjct: 603 TVHTFNALILGLVEKCQMEKAVEILDEM-SLAGISPNEHTYTTIMHGYASLGDTGKAFEY 661
Query: 266 LKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD---YITMLG 322
K + D Y L+ G M + + +++ R+ Y ++
Sbjct: 662 FTKLK-TEGLELDVYTYEALLKACCKSG---RMQSALAVTREMSSQKIPRNTFVYNILID 717
Query: 323 SLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTP 382
+ G++ EA +++++ + D + + G +++A ++E+ G P
Sbjct: 718 GWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKP 777
Query: 383 TPNSWSIIAAGYADKNNMEKAFECMKE 409
+++ + G+A + EKA +C +E
Sbjct: 778 NIKTYTTLIHGWARASLPEKALKCFQE 804
>gi|296084463|emb|CBI25022.3| unnamed protein product [Vitis vinifera]
Length = 927
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 147/322 (45%), Gaps = 8/322 (2%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDK--LYGALLN 145
AL M +G+ S+ +++ + K+ E+A+ +F + +YG ++
Sbjct: 322 ALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIY 381
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
+ + + ++ +L+++M+E G Y+ +M YT G EK V +KE G P
Sbjct: 382 AHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTP 441
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
SY IN Y ++S V + ME I + TYS + N ++ LK+ A +
Sbjct: 442 SVISYGCLINLYIKIGKVSKALEVSKMMEVAG-IKHNMKTYSMLINGFV--RLKDWANAF 498
Query: 266 LKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGS 323
ED+V D + YN++I + +GN D ++ + + + R ++ ++
Sbjct: 499 -AVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHG 557
Query: 324 LVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPT 383
+ G++ A ++ + S N ++LG +K +EKA +L E+ G +P
Sbjct: 558 FARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPN 617
Query: 384 PNSWSIIAAGYADKNNMEKAFE 405
++++ I GYA + KAFE
Sbjct: 618 EHTYTTIMHGYASLGDTGKAFE 639
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/327 (18%), Positives = 143/327 (43%), Gaps = 10/327 (3%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYF-NSLNDEDKVDK-LYGALLN 145
AL+VS+ M G+ ++ +++ ++ +++ +A F + + D K D LY ++
Sbjct: 462 ALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIR 521
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
+ G +D ++ +++M++ + + I+ + +G + ++ M+ +G P
Sbjct: 522 AFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIP 581
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
++ I + ++ +L EM S + IS + TY+T+ + Y G KA Y
Sbjct: 582 TVHTFNALILGLVEKCQMEKAVEILDEM-SLAGISPNEHTYTTIMHGYASLGDTGKAFEY 640
Query: 266 LKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD---YITMLG 322
K + D Y L+ G M + + +++ R+ Y ++
Sbjct: 641 FTKLK-TEGLELDVYTYEALLKACCKSG---RMQSALAVTREMSSQKIPRNTFVYNILID 696
Query: 323 SLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTP 382
+ G++ EA +++++ + D + + G +++A ++E+ G P
Sbjct: 697 GWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKP 756
Query: 383 TPNSWSIIAAGYADKNNMEKAFECMKE 409
+++ + G+A + EKA +C +E
Sbjct: 757 NIKTYTTLIHGWARASLPEKALKCFQE 783
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 115/253 (45%), Gaps = 5/253 (1%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I L + + + A+++ + MS G++ + H + + + A YF L E
Sbjct: 589 LILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEG 648
Query: 135 -KVD-KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
++D Y ALL + G + +L++ ++M + YN ++ + G +
Sbjct: 649 LELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAA 708
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
+++ MK+ GV PD +Y IN+ ++ +QEME + + TY+T+ +
Sbjct: 709 ELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVG-VKPNIKTYTTLIHG 767
Query: 253 YIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQ 312
+ A L EKA+ ++ + K A+ Y+ L++ S + E + G+ I C++
Sbjct: 768 WARASLPEKALKCFQEMKSAGLKPDKAV-YHCLMTSLLSRASVAEEYIYSGVVGI-CREM 825
Query: 313 LNRDYITMLGSLV 325
+ + +G+ V
Sbjct: 826 IECELTVDMGTAV 838
>gi|168033824|ref|XP_001769414.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679334|gb|EDQ65783.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 410
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 184/381 (48%), Gaps = 27/381 (7%)
Query: 76 IRQLRSRKRFKHALQVSEWMSGQGLAFSVHDH--AVQLDLIGKVRGLESAETYFNSLNDE 133
+++L R + ALQV ++ + L + + +H + ++G+ L A F ++
Sbjct: 1 MKELEIRGARRQALQVFRFLQ-EHLEYELKEHNCVTIISILGREGKLGLAREIFEGMSKA 59
Query: 134 DKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
+ Y ALL+ Y ++GL+ E+ +L + MKE G + L YN + + T + ++
Sbjct: 60 GVAPSVHAYTALLSGYAKQGLLKEAWALFEAMKEKGCSPNVLTYNTL--INACTKRAYRL 117
Query: 192 PDVLL---DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYST 248
PD++ +MK+ GV P++ +Y +N+ S + +L+EM++ + + + +Y+T
Sbjct: 118 PDLVGLFEEMKQAGVQPNDITYNCMVNACVCLSLFDTASQILKEMKAVNCLP-NVISYTT 176
Query: 249 VANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMK-FWGLQKI 307
+ N +G ++A+ ++ +++ +S ++ YN L+ YA G ++ M F G++
Sbjct: 177 MINSLGRSGRLDEAVELFEEMKEL-GRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMEDE 235
Query: 308 KCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEK 367
C L Y T++ + G EAE + E + D N +L YS+ +
Sbjct: 236 GCIPDL-YTYNTVIDMCGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSKWSRRGR 294
Query: 368 ADAVLKEIVKKGKTPTPNSWSII--AAGYADKNNMEKAFECMKEALAVHEENKFWRPKPS 425
A +LK + + G TP +++I+ AAG A + EA+ + E K P+
Sbjct: 295 ARDLLKTMKRAGCTPDLWTYNILLDAAGKAGSAS---------EAMQIFHELKAAGHSPN 345
Query: 426 LV--SSILDWLGDNRDVEEVE 444
LV S++++ G EE E
Sbjct: 346 LVSFSALINMYGRLGYFEEAE 366
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 103/231 (44%), Gaps = 14/231 (6%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ++N R G +DE++ L ++MKE+G ++ YN ++ Y G++EK + + M+
Sbjct: 174 YTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGME 233
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ G PD ++Y I+ G + E V EM+ + + D TY+T+ + Y +
Sbjct: 234 DEGCIPDLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKG-CTPDRVTYNTMLDAYSKWSRR 292
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
+A LK + + D YN L+ G+ E M+ + K +
Sbjct: 293 GRARDLLKTMKR-AGCTPDLWTYNILLDAAGKAGSASEAMQIFHELKAAGHSPNLVSFSA 351
Query: 320 MLGSLVKIGELEEAEKM-LEEWELSCYCYDFRVPNI-----ILLGYSQKGM 364
++ ++G EEAE+ +E C VPN ++ YS GM
Sbjct: 352 LINMYGRLGYFEEAERAWVEMRATGC------VPNATAYCGLMNSYSHHGM 396
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/280 (20%), Positives = 122/280 (43%), Gaps = 19/280 (6%)
Query: 137 DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
D Y ++N V L D + ++++MK + + ++Y ++ +G+ ++ ++
Sbjct: 136 DITYNCMVNACVCLSLFDTASQILKEMKAVNCLPNVISYTTMINSLGRSGRLDEAVELFE 195
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
+MKE G P++++Y + +Y + ME + I D TY+TV +
Sbjct: 196 EMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGCIP-DLYTYNTVIDMCGRG 254
Query: 257 GL-KEKAIIYL----KKCEDIVSKSKDALGYNHLISHYASL---GNKDEMMKFWGLQKIK 308
GL E ++L K C + D + YN ++ Y+ G +++K +++
Sbjct: 255 GLFAEAEGVFLEMQRKGC------TPDRVTYNTMLDAYSKWSRRGRARDLLK--TMKRAG 306
Query: 309 CKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKA 368
C L Y +L + K G EA ++ E + + + + + ++ Y + G E+A
Sbjct: 307 CTPDL-WTYNILLDAAGKAGSASEAMQIFHELKAAGHSPNLVSFSALINMYGRLGYFEEA 365
Query: 369 DAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMK 408
+ E+ G P ++ + Y+ + M K C++
Sbjct: 366 ERAWVEMRATGCVPNATAYCGLMNSYSH-HGMYKVLCCIR 404
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 139/306 (45%), Gaps = 11/306 (3%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+ + G ++ L +M+ G + + YN I+ Y + + +L M
Sbjct: 206 YNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMA 265
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G+ P+ SY + IN ++ +L+EM + ++ D T++T+ N Y G
Sbjct: 266 LKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVP-DRVTFNTLINGYCNVGNF 324
Query: 260 EKAIIYLKKCEDIVSK--SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
+A++ ++V S + + Y LI+ GN + M+F + + R Y
Sbjct: 325 HQALVLHA---EMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTY 381
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
T++ + G L++A ++++E + + N ++ G+ G +E A +L+E+++
Sbjct: 382 TTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIE 441
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDN 437
+G P S+S I +G+ +EKAF+ E +A K P + SS++ L
Sbjct: 442 RGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVA-----KGISPDVATYSSLIQGLCKQ 496
Query: 438 RDVEEV 443
R + EV
Sbjct: 497 RRLGEV 502
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 161/353 (45%), Gaps = 37/353 (10%)
Query: 85 FKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE--DKVDKLYGA 142
F AL + M GL+ +V + ++ + K L A + + + D + Y
Sbjct: 324 FHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTT 383
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
L++ + ++G + ++ +M++M E G + + YN ++ + G+ E +L +M E G
Sbjct: 384 LIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERG 443
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
PD SY I+ + EL + EM ++ IS D TYS+ +I GL ++
Sbjct: 444 FIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKG-ISPDVATYSS-----LIQGLCKQR 497
Query: 263 IIYLKKCEDIVSK------SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
L + D+ + D + Y LI+ Y G+ D+ ++ L +K + D
Sbjct: 498 --RLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALR---LHDEMIQKGFSPD 552
Query: 317 YIT---MLGSLVKIGELEEAEKMLEE--WELS-------------CYCYDFRVPNIILLG 358
+T ++ K +EA+++L + +E S C +F+ ++ G
Sbjct: 553 IVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKG 612
Query: 359 YSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
+ KG++ +AD VL+ +++KG +++I G++ N+EKA+ KE L
Sbjct: 613 FCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEML 665
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 127/269 (47%), Gaps = 23/269 (8%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y AL+N + G ++++ L+Q+M E G ++Y+ I+ + + EK + ++M
Sbjct: 416 YNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMV 475
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G+ PD +Y I + L + ++ QEM S + D TY+++ N Y I G
Sbjct: 476 AKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLG-LPPDEVTYTSLINAYCIEGDL 534
Query: 260 EKAIIYLKKCEDIVSK--SKDALGYNHLISHYASLGNKDE----MMKFWGLQKI------ 307
+KA L+ ++++ K S D + YN LI+ + E ++K + +
Sbjct: 535 DKA---LRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITY 591
Query: 308 -----KCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQK 362
C + + ++ G + EA+++LE Y + V N+I+ G+S+
Sbjct: 592 NTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKV 651
Query: 363 GMIEKADAVLKEIVKKGKTPTPNSWSIIA 391
G IEKA + KE++ G P+S +I+A
Sbjct: 652 GNIEKAYNLYKEMLHSGF--APHSVTIMA 678
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/370 (20%), Positives = 138/370 (37%), Gaps = 51/370 (13%)
Query: 121 ESAETYFNSLNDEDKVDKLYGALLNCYV----REGLVDESLSLMQKMKEMGSFGSALNYN 176
E+ E F L + K A+ + V R L++++LS++ K G L+YN
Sbjct: 112 ETGEDLFQCLKNSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYN 171
Query: 177 GIMCLYTNTGQHEKIPD-VLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMES 235
I+ T Q KI + + +M E+GV P+ ++Y I I + L EME
Sbjct: 172 AILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMER 231
Query: 236 QSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNK 295
+ + + YN +I Y L
Sbjct: 232 NGCLP-------------------------------------NVVTYNTIIDAYCKLRKI 254
Query: 296 DEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNII 355
E K L +K Y ++ L + G+++E ++LEE Y D N +
Sbjct: 255 GEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTL 314
Query: 356 LLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHE 415
+ GY G +A + E+VK G +P +++ + N+ +A E + +
Sbjct: 315 INGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQM----- 369
Query: 416 ENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNM--YHALTEAHIRSG-- 471
++ P ++++D +++ + + + Y+AL H G
Sbjct: 370 RDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRM 429
Query: 472 QEVDGLLESM 481
++ GLL+ M
Sbjct: 430 EDASGLLQEM 439
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/340 (19%), Positives = 148/340 (43%), Gaps = 10/340 (2%)
Query: 79 LRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDK 138
+R+++ K A + + M G++ +V+ + + + LE +F + +
Sbjct: 178 IRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPN 237
Query: 139 L--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
+ Y +++ Y + + E+ L++ M G + ++YN ++ GQ ++ ++L
Sbjct: 238 VVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILE 297
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
+M + PD ++ IN Y + EM ++ +S + TY+T+ N A
Sbjct: 298 EMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEM-VKNGLSPNVVTYTTLINSMCKA 356
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
G +A+ +L + D + Y LI ++ G + + + + K +
Sbjct: 357 GNLNRAMEFLDQMRD-RGLHPNGRTYTTLIDGFSQQG---FLKQAYQIMKEMVENGFTPT 412
Query: 317 YIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
IT ++ +G +E+A +L+E + D + I+ G+ + +EKA +
Sbjct: 413 IITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKV 472
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAV 413
E+V KG +P ++S + G + + + + +E L++
Sbjct: 473 EMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSL 512
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 167/353 (47%), Gaps = 26/353 (7%)
Query: 70 LELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNS 129
++ R+ + K+++ L + + M +G+A S++ ++ ++ + R L A +
Sbjct: 89 IDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGK 148
Query: 130 LN----DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGI---MCLY 182
+ + D V ++ LLN E V E+L L+ +M EMG + + N + +CL
Sbjct: 149 IMKLGYEPDTV--IFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL- 205
Query: 183 TNTGQHEKIPD--VLLD-MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHI 239
+ K+ D VL+D M E G P+ +Y +N + + +L++ME + +I
Sbjct: 206 -----NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKME-ERNI 259
Query: 240 SMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMM 299
+D YS + + G + A + E I D + YN LI + + G D+
Sbjct: 260 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEME-IKGFKADIITYNTLIGGFCNAGRWDDGA 318
Query: 300 KFWGLQKIKCKKQLNRDYIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIIL 356
K L + K++++ + +T ++ S VK G+L EA+++L+E + N ++
Sbjct: 319 K---LLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLI 375
Query: 357 LGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
G+ ++ +E+A ++ ++ KG P +++I+ GY N ++ E +E
Sbjct: 376 DGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFRE 428
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/354 (20%), Positives = 160/354 (45%), Gaps = 8/354 (2%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
++D+ V G K + + L ++ L + A+ + + M G + + L+++
Sbjct: 180 LVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMC 239
Query: 116 KVRGLESAETYFNSLNDED-KVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
K A + + + K+D + Y +++ ++G +D + +L +M+ G +
Sbjct: 240 KSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADII 299
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
YN ++ + N G+ + +L DM + + P+ ++ + I+S+ +L + +L+EM
Sbjct: 300 TYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEM 359
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYAS 291
Q I+ + TY+++ + + E+AI + + ++SK D + +N LI+ Y
Sbjct: 360 -MQRGIAPNTITYNSLIDGFCKENRLEEAI---QMVDLMISKGCDPDIMTFNILINGYCK 415
Query: 292 LGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRV 351
D+ ++ + ++ Y T++ + G+LE A+K+ +E D
Sbjct: 416 ANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVS 475
Query: 352 PNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
I+L G G +EKA + +I K + II G + + ++ A++
Sbjct: 476 YKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWD 529
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 132/275 (48%), Gaps = 12/275 (4%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ L++ +V+EG + E+ L+++M + G + + YN ++ + + E+ ++ M
Sbjct: 336 FSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMI 395
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G PD ++ I IN Y + + + +EM + I+ + TY+T+ + +G
Sbjct: 396 SKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIA-NTVTYNTLVQGFCQSGKL 454
Query: 260 EKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD- 316
E A K +++VS+ D + Y L+ G ++ ++ +G KI+ K ++ D
Sbjct: 455 EVA---KKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFG--KIE-KSKMELDI 508
Query: 317 --YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
Y+ ++ + ++++A + L D R NI++ +K + KAD + ++
Sbjct: 509 GIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRK 568
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
+ ++G P +++I+ + ++ A E ++E
Sbjct: 569 MTEEGHAPDELTYNILIRAHLGDDDATTAAELIEE 603
>gi|15218232|ref|NP_175000.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75268143|sp|Q9C545.1|PPR72_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g43010
gi|12321535|gb|AAG50822.1|AC026757_3 hypothetical protein [Arabidopsis thaliana]
gi|12323053|gb|AAG51513.1|AC068324_1 hypothetical protein [Arabidopsis thaliana]
gi|332193817|gb|AEE31938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 257
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 119/242 (49%), Gaps = 10/242 (4%)
Query: 23 IFTRAYRAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSR 82
+F R+Y + P A L SRI + S+ P+L+QW +G +++ L+ +I+ L
Sbjct: 23 LFRRSYETL-PAANQTLPSRIKTDINQKASIIPLLEQWRKQGYEVNPSHLRGLIKNLSDC 81
Query: 83 KRFKHALQVSEWMSGQGLAFSV-HDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYG 141
K F AL+ S+WM + + D A QL L+ V GLE AE F ++ ++ + Y
Sbjct: 82 KNFTTALEASKWMFKHSVFDNFPEDCAAQLHLVNTVLGLEEAEKMFKNIPEKMRD---YS 138
Query: 142 ALLNCYVRE-GLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKE 200
LL+ Y + VD++ + +KM+E+G +N ++CLY + + + +L +K+
Sbjct: 139 VLLSSYTKPVRTVDKAEATFKKMRELGFLLKPYLFNSMICLYGQLQRLDMVEKLLYKLKK 198
Query: 201 NGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKE 260
N + + Y + +++ME + S+ I ++ T +A Y AG E
Sbjct: 199 NNMEVGSLKVNNVSRVY---ANINAMEK-FKTWVSKEGIELERDTIVAMAKAYHRAGSIE 254
Query: 261 KA 262
KA
Sbjct: 255 KA 256
>gi|297842914|ref|XP_002889338.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335180|gb|EFH65597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 712
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 92/414 (22%), Positives = 174/414 (42%), Gaps = 22/414 (5%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
V++ LR K L+ +W+ +G + + L+ +G+ R L +A + S+
Sbjct: 74 VLQTLRLIKVPADGLRFFDWVYNKGFSHKEQSFFLMLEFLGRARNLNAARNFLFSIEKRS 133
Query: 135 K-----VDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHE 189
D+ + +L+ Y GL ES++L Q MK+MG S L +N ++ + G+
Sbjct: 134 NGCVKLQDRYFNSLIRSYGNAGLFQESVNLFQTMKKMGISPSVLTFNSLLSILLKRGRTG 193
Query: 190 KIPDVLLDMKEN-GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYST 248
D+ +M+ GV PD++++ I+ + S + + +EME S + D TY+T
Sbjct: 194 MAHDMFDEMRRTYGVTPDSYTFNTLISGFCKNSMVDQAFTIFKEMELYS-CNPDVVTYNT 252
Query: 249 VANYYIIAGLKEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKI 307
+ + AG + A L + + + + Y L+ Y DE + +
Sbjct: 253 IIDGLCRAGKVKIAHNLLNGMLKKATAVHPNIVSYTTLLRGYCMKQEIDEALLVFHEMLT 312
Query: 308 KCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWE-LSCYCYDFRVPNIILLGYSQKGMIE 366
+ K Y T++ L + +E + L + + + D NI++ + G ++
Sbjct: 313 RGLKPNAVTYNTLIKGLSEAHRYDEIKGFLIGGDAFTTFSPDACTFNILIKAHCDAGHLD 372
Query: 367 KADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA-------FECMKEALAVHEENKF 419
A V +E++ P S+S++ +N +KA FE KE L E K
Sbjct: 373 AAMKVFQEMLNMKLHPDSASYSVLIRTLCLRNEFDKAETLFNELFE--KEVLLGKNECK- 429
Query: 420 WRPKPSLVSSILDWLGDNRDVEEVE-AFVSSLKIKVQKRNMYHALTEAHIRSGQ 472
P + + + ++L N ++ E F +K Q + Y L R G+
Sbjct: 430 --PLAAAYNLMFEYLCANGKAKQAEKVFRQLMKRGAQDPSSYRTLITGLCREGK 481
>gi|413917311|gb|AFW57243.1| hypothetical protein ZEAMMB73_018964 [Zea mays]
Length = 514
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 159/343 (46%), Gaps = 4/343 (1%)
Query: 52 SLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWM-SGQGLAFSVHDHAVQ 110
S+ + W+ +G+ + + I +LR + + ALQV EW+ + S D++
Sbjct: 60 SVGAAMRGWMADGRAVHRGHVFHAINRLRRHRLHRTALQVMEWIVRERPYKLSELDYSYL 119
Query: 111 LDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFG 170
L+ KV G+ AE+ F + E + + LY L+ + + S + M+KM+E+
Sbjct: 120 LEFTAKVHGISEAESLFLRVPQECRKELLYNNLVMAALDLNHIKHSYAYMRKMRELSLPI 179
Query: 171 SALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVL 230
S YN ++ L+++ G+ + I +L MK + V P +Y I + + + V
Sbjct: 180 SPYVYNRLIILHSSPGRRKTISKILSQMKADRVVPHTSTYNILLKIQANEHNIDGLARVF 239
Query: 231 QEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYA 290
M+ ++ I + TY +A + +A L Y++ E+ ++ + + L+ Y
Sbjct: 240 NGMK-RAKIEPNEITYGILAIAHAVARLYTVCHTYVEAIENSMTGTNWS-TLEILLILYG 297
Query: 291 SLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFR 350
LG + E+ + W + + ++ + + + K+G +++AEK+ + +
Sbjct: 298 YLGKEKELKRTWEIMQ-DLPHIRSKSFTLAIEAFGKVGSIDQAEKIWIHIKSTKKLSLTE 356
Query: 351 VPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAG 393
N +L Y + G+++KA +V KE+ G P ++ +A G
Sbjct: 357 QFNSMLSVYCRHGVVDKASSVFKEMRANGCQPNAITYRHLALG 399
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 169/403 (41%), Gaps = 15/403 (3%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
+ D+ V +G VI L AL V M +G+ + ++ L +
Sbjct: 620 LFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLV 679
Query: 116 KVRGLESAETYFNSLNDEDKVDK--LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
K ++ A FN L + V +Y ++N V+ VDE+ L+ MK
Sbjct: 680 KDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLF 739
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
Y ++ +G+ E+ ++ M E G PD +Y ++ G +LS + + M
Sbjct: 740 TYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAM 799
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK--SKDALGYNHLISHYAS 291
+ + D TYS++ + G E+A + E+ +SK + + Y+ LI +
Sbjct: 800 AKKRCVP-DVVTYSSLIDSLGKEGRVEEAYYFF---ENSISKGCTPNVGVYSSLIDSFGK 855
Query: 292 LGNKDEMMK-FWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFR 350
G D ++ F +Q+ +C + Y +L L K G L AEK+LEE E D
Sbjct: 856 KGMVDRALELFEEMQRRQCPPNI-VTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLV 914
Query: 351 VPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEA 410
NI++ G + GM+++A++ K + +KG P +++ + + + +A E
Sbjct: 915 TYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSM 974
Query: 411 LAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK 453
E + + P + ++D LG V E +K+K
Sbjct: 975 -----EEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVK 1012
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 84/419 (20%), Positives = 160/419 (38%), Gaps = 78/419 (18%)
Query: 63 EGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSV----------------HD 106
EG +IS L ++R S AL++ M G S H
Sbjct: 211 EGHRISMHLLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHS 270
Query: 107 HAVQLDLIGKVRGLESAETY---FNSLNDEDKVDK------------------LYGALLN 145
+ +G+ R A+T+ +S N ++D + L++
Sbjct: 271 AVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLID 330
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
V+ G +DE+ MK + + + Y ++ G+ E+ +V ++MKEN P
Sbjct: 331 ALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSP 390
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
D +Y I+ G E + +EM+ + + + TY+ + + AG + +A
Sbjct: 391 DAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVP-NLRTYNIMISVLGKAGRQPEAWQL 449
Query: 266 LKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQ----LNRD----- 316
++ D YN LI LG +M K + K +K ++RD
Sbjct: 450 FHDLKE-QGAVPDVFTYNTLID---VLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGH 505
Query: 317 -------------------------YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRV 351
Y T++ + + G ++EA K+LE + C V
Sbjct: 506 EGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMK-KHECIPTVV 564
Query: 352 PNIILL-GYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
L+ G + G +++A ++L+E+ K+G P+ ++S + A + ++ E++ E
Sbjct: 565 TYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDE 623
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 146/340 (42%), Gaps = 28/340 (8%)
Query: 115 GKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALN 174
G R +E F SL + Y L++ ++ G VDE++ L++ MK+ + +
Sbjct: 511 GADRTVEYPSLGFKSLGE-----ITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVT 565
Query: 175 YNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEME 234
Y ++ G+ ++ +L +M++ G P +Y + S+ R + ++ EM
Sbjct: 566 YTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMV 625
Query: 235 SQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGN 294
+ ++ D TYS V N + ++A+ D+ + K+ G L+ +Y +L +
Sbjct: 626 RKGCVA-DVSTYSLVINCLCKSDDVDQAL-------DVFGRMKEE-GMEPLLGNYKTLLS 676
Query: 295 ---KDEMMKFWGLQKIK--CKKQLNRD---YITMLGSLVKIGELEEAEKMLEEWELSCYC 346
KDE + F LQ + L D Y M+ LVK ++EA K+++ +
Sbjct: 677 SLVKDEKIDF-ALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNIL 735
Query: 347 YDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFEC 406
D +L G + G +E+A + ++ ++G P +++ + + A
Sbjct: 736 PDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALII 795
Query: 407 MKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAF 446
+ A+A K P SS++D LG VEE F
Sbjct: 796 FR-AMA----KKRCVPDVVTYSSLIDSLGKEGRVEEAYYF 830
>gi|449530367|ref|XP_004172167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like, partial [Cucumis sativus]
Length = 564
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 130/268 (48%), Gaps = 6/268 (2%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+YG ++ Y + +D++ +L+++M+E G Y+ +M YT G +K V
Sbjct: 20 IYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERF 79
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
KE G+ P +Y IN Y ++S V +EME + I + TYS + N ++ L
Sbjct: 80 KECGLNPSVITYGCLINLYAKLGKVSKALEVSKEME-HAGIKHNMKTYSMLINGFL--KL 136
Query: 259 KEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
K+ A + ED++ D + YN++I+ + +G D + + + K R
Sbjct: 137 KDWANAF-AIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRT 195
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
++ ++ + GE+++A + + +S N ++LG +K +EKA+ +L E+
Sbjct: 196 FMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMT 255
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAF 404
G +P ++++ I GYA + KAF
Sbjct: 256 LAGVSPNEHTYTTIMHGYASLGDTGKAF 283
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/369 (20%), Positives = 157/369 (42%), Gaps = 11/369 (2%)
Query: 46 LGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVH 105
+GD D L V +++ G S + +I + AL+VS+ M G+ ++
Sbjct: 66 VGDEDKCLL-VFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMK 124
Query: 106 DHAVQLDLIGKVRGLESAETYFNSL-NDEDKVDK-LYGALLNCYVREGLVDESLSLMQKM 163
+++ ++ K++ +A F L D K D LY ++ + G +D ++ +++M
Sbjct: 125 TYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEM 184
Query: 164 KEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSEL 223
++ + + I+ + G+ +K DV M+ +G P +Y I + ++
Sbjct: 185 QKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKM 244
Query: 224 SSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYN 283
E +L EM + + +S + TY+T+ + Y G KA Y K D D Y
Sbjct: 245 EKAEQILDEM-TLAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRD-EGLQLDVYTYE 302
Query: 284 HLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD---YITMLGSLVKIGELEEAEKMLEEW 340
L+ G M + K + + R+ Y ++ + G++ EA ++++
Sbjct: 303 ALLKACCKSG---RMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQM 359
Query: 341 ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNM 400
+ D + S+ G +++A ++E+ G P +++ + G+A +
Sbjct: 360 KREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLP 419
Query: 401 EKAFECMKE 409
EKA C +E
Sbjct: 420 EKALSCFEE 428
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 86/223 (38%), Gaps = 6/223 (2%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
+LD+ L G +E ++ S A + +GL V+ + L
Sbjct: 250 ILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACC 309
Query: 116 KVRGLESAETYFNSLNDED--KVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
K ++SA ++ ++ + +Y L++ + R G V E+ LMQ+MK G
Sbjct: 310 KSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIH 369
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
Y + + G ++ + +MK GV P+ +Y IN + S + +EM
Sbjct: 370 TYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEM 429
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKAIIY---LKKCEDIV 273
+ S + D Y + + IY L C ++V
Sbjct: 430 K-LSGLKPDRAVYHCLMTSLLSRATVAHGCIYPGILSVCREMV 471
>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 156/346 (45%), Gaps = 16/346 (4%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGK-------VRGLESAETYF 127
+I S R++ A+ V + M +G ++ + V L++ GK ++GL
Sbjct: 39 LITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNA 98
Query: 128 NSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQ 187
L DE Y L+ C R L +E+ ++ + MK MG + YN ++ +Y + +
Sbjct: 99 GVLPDE----YTYNTLITCCRRGSLHEEAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRR 154
Query: 188 HEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYS 247
++ +VL +M+ NG P +Y I++Y AR L L+ + I++D TY+
Sbjct: 155 TKEAMEVLREMEVNGCSPSIVTYNSLISAY-ARDGLLKEAMELKNQMVEGGINLDVFTYT 213
Query: 248 TVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKI 307
T+ + ++ AG E A+ + K + +N LI + + G EMMK + K
Sbjct: 214 TLLSGFVRAGKDESAMRVFAEMRAAGCKP-NICTFNALIKMHGNRGKFAEMMKVFEEIKN 272
Query: 308 KCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEK 367
C + T+L + G E + +E + + + + N ++ YS+ G ++
Sbjct: 273 SCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQ 332
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKN---NMEKAFECMKEA 410
A + K +++ G TP ++++ + A A EK F MK+
Sbjct: 333 AMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEMKDG 378
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 147/347 (42%), Gaps = 21/347 (6%)
Query: 140 YGALLNCYVREGLV-DESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
Y +LN Y + G+ ++ L + MK G YN ++ HE+ V DM
Sbjct: 71 YNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHEEAAAVFKDM 130
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
K G PD +Y ++ YG VL+EME S TY+++ + Y GL
Sbjct: 131 KSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNG-CSPSIVTYNSLISAYARDGL 189
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMK-FWGLQKIKCKKQLNRDY 317
++A+ LK + D Y L+S + G + M+ F ++ CK
Sbjct: 190 LKEAM-ELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPN----- 243
Query: 318 ITMLGSLVKI----GELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
I +L+K+ G+ E K+ EE + SC D N +L + Q GM + V K
Sbjct: 244 ICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFK 303
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDW 433
E+ + G P ++++ + + Y+ + ++A + K L P S +++L
Sbjct: 304 EMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAG-----ITPDLSTYNAVLAA 358
Query: 434 LGDNRDVEEVEAFVSSLKIKVQKRN--MYHALTEAHIRSGQEVDGLL 478
L E+ E + +K K N Y +L A+ +G+E+ +L
Sbjct: 359 LARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYA-NGKEIGRML 404
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 149/369 (40%), Gaps = 24/369 (6%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
VL + + G S + +I K A+++ M G+ V + L
Sbjct: 161 VLREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFV 220
Query: 116 KVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
+ ESA F + + + AL+ + G E + + +++K +
Sbjct: 221 RAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIV 280
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
+N ++ ++ G ++ V +MK G P+ +Y I++Y ++ + M
Sbjct: 281 TWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRM 340
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDA------LGYNHLIS 287
++ I+ D TY+ V GL E++ E I ++ KD L Y L+
Sbjct: 341 -LEAGITPDLSTYNAVLAALARGGLWEQS-------EKIFAEMKDGRCKPNELTYCSLLH 392
Query: 288 HYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGE----LEEAEKMLEEWELS 343
YA N E+ + L + C + + +L +LV + L EAE E +
Sbjct: 393 AYA---NGKEIGRMLALAEEICSGVI-EPHAVLLKTLVLVNSKCDLLVEAEVAFLELKRK 448
Query: 344 CYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
+ D N +L Y ++ M K + +L + + G TP+ +++ + ++ N E++
Sbjct: 449 GFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLMYMHSRSENFERS 508
Query: 404 FECMKEALA 412
E +KE LA
Sbjct: 509 EEVLKEILA 517
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 70/160 (43%), Gaps = 2/160 (1%)
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
A+L+ Y R + ++ ++ M E G S YN +M +++ + E+ +VL ++
Sbjct: 459 AMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLMYMHSRSENFERSEEVLKEILAK 518
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
G+ PD SY I +Y + + EM +S + D TY+T Y + E
Sbjct: 519 GIKPDTISYNTVIFAYCRNGRMKEASRIFSEMR-ESGLVPDVITYNTFVASYAADSMFED 577
Query: 262 AIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKF 301
AI ++ K YN ++ Y ++D+ + F
Sbjct: 578 AIDVVRYMIKHGCKPNQNT-YNSVVDGYCKHNHRDDAIMF 616
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 143/316 (45%), Gaps = 18/316 (5%)
Query: 99 GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDES 156
G+ +V+ + ++ + K + +E+ +++ + + ++ + Y L+N Y R+GL++E+
Sbjct: 249 GVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEA 308
Query: 157 LSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINS 216
LM M G YN I+ TG++ + VL +M + G+ PD +Y I +
Sbjct: 309 FELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVE 368
Query: 217 YGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS 276
+ E + EM SQ + D ++S + G ++A+ Y + ++ +
Sbjct: 369 CCRNDNMMDAERIFDEMPSQGVVP-DLVSFSALIGLLSKNGCLDQALKYFRDMKN-AGLA 426
Query: 277 KDALGYNHLISHYA-------SLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGE 329
D + Y LI + +L +DEM++ + + Y T+L L K
Sbjct: 427 PDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVV-------TYNTILNGLCKEKM 479
Query: 330 LEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSI 389
L EA+++ E DF ++ GYS+ G + KA + + ++++ P +++
Sbjct: 480 LSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNT 539
Query: 390 IAAGYADKNNMEKAFE 405
+ G+ + MEK E
Sbjct: 540 LIDGFCKGSEMEKVNE 555
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 160/363 (44%), Gaps = 43/363 (11%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV--DKLYGALLN 145
A ++ + M QG+ + + + L+ K L+ A YF + + + +Y L+
Sbjct: 378 AERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIG 437
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
+ R G++ E+L + +M E G + YN I+ + ++ +M E GV P
Sbjct: 438 GFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFP 497
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
D +++ IN Y ++ L EM Q ++ D TY+T+ + + EK
Sbjct: 498 DFYTFTTLINGYSKDGNMNKAV-TLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVN-- 554
Query: 266 LKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFW------GLQK--IKCK----- 310
+ D++S+ + + Y LI+ Y ++G E + W G + I C
Sbjct: 555 -ELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKG 613
Query: 311 -------------------KQLNRD---YITMLGSLVKIGELEEAEKMLEEWELSCYCYD 348
K + D Y T++ +K ++ A ++ + E S D
Sbjct: 614 YCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPD 673
Query: 349 FRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMK 408
N+IL G+S++G +++A+ ++ +++++G P ++++ + G+ +NN+++AF
Sbjct: 674 VITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHD 733
Query: 409 EAL 411
E L
Sbjct: 734 EML 736
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 126/305 (41%), Gaps = 42/305 (13%)
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
+LL V+ G VD + + Q++ G + N ++ + E L DM+E
Sbjct: 224 SLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEK 283
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWG--TYSTVANYYIIAG-- 257
GV PD +Y IN+Y R L +E + M+S S + TY+ + N G
Sbjct: 284 GVFPDVVTYNTLINAY-CRQGL--LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKY 340
Query: 258 LKEKAI-----------------IYLKKC-------------EDIVSKS--KDALGYNHL 285
L+ K + I L +C +++ S+ D + ++ L
Sbjct: 341 LRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSAL 400
Query: 286 ISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCY 345
I + G D+ +K++ K N Y ++G + G + EA K+ +E
Sbjct: 401 IGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGC 460
Query: 346 CYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA-- 403
D N IL G ++ M+ +AD + E+ ++G P +++ + GY+ NM KA
Sbjct: 461 VLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVT 520
Query: 404 -FECM 407
FE M
Sbjct: 521 LFEMM 525
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+N +++E +D + +L+ KM+ G + YN I+ ++ G+ ++ ++L M
Sbjct: 642 YNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMI 701
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMD 242
E GV PD +Y IN + ++ L V EM + + D
Sbjct: 702 ERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDD 744
>gi|8778536|gb|AAF79544.1|AC022464_2 F22G5.3 [Arabidopsis thaliana]
Length = 555
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 96/450 (21%), Positives = 192/450 (42%), Gaps = 37/450 (8%)
Query: 51 VSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVS------------------ 92
V++ L W+ +G + ++ I +LR R K AL++S
Sbjct: 79 VTVGSALQSWMGDGFPVHGGDVYHAINRLRKLGRNKRALEMSNLGMLLDRNEFLLMKILL 138
Query: 93 ---EWM-SGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYV 148
EW+ + +++ L+ K+ G+ E F + E + + LY L+ +
Sbjct: 139 NLMEWIIRERPYRLGELEYSYLLEFTVKLHGVSQGEKLFTRVPQEFQNELLYNNLVIACL 198
Query: 149 REGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNF 208
+G++ +L M+KM+E+G S L YN ++ + G+ + I L MK + P
Sbjct: 199 DQGVIRLALEYMKKMRELGYRTSHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVS 258
Query: 209 SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKK 268
+Y I + + + M+ ++ + + +Y +A + +A L A Y ++
Sbjct: 259 TYHILMKLEANEHNIDGVLKAFDGMK-KAGVEPNEVSYCILAMAHAVARLYTVAEAYTEE 317
Query: 269 CEDIVSKSKDALGYNHLISHYASLGNKDEMMKFW----GLQKIKCKKQLNRDYITMLGSL 324
E ++ + + L+ Y LG + E+ + W G ++ K Y+ +
Sbjct: 318 IEKSIT-GDNWSTLDILMILYGRLGKEKELARTWNVIRGFHHVRSK-----SYLLATEAF 371
Query: 325 VKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTP 384
++G L+ AE++ E + + N +L Y + G+IEKA V +E+ G P
Sbjct: 372 ARVGNLDRAEELWLEMKNVKGLKETEQFNSLLSVYCKDGLIEKAIGVFREMTGNGFKPNS 431
Query: 385 NSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVS--SILDWLGDNRDVEE 442
++ +A G A M++A + ++ L + P L + SI++ + DVE
Sbjct: 432 ITYRHLALGCAKAKLMKEALKNIEMGLNLKTSKSIGSSTPWLETTLSIIECFAEKGDVEN 491
Query: 443 VEAFVSSLKIKVQKRN--MYHALTEAHIRS 470
E +K R +Y+AL +A++++
Sbjct: 492 SEKLFEEVKNAKYNRYAFVYNALFKAYVKA 521
>gi|356577532|ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 932
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 148/324 (45%), Gaps = 12/324 (3%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL----YGAL 143
AL M +G+ ++ +++ + K+ ++A+ +F ++K+ L YG +
Sbjct: 338 ALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEA--KEKLPSLNAVIYGGI 395
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
+ + + +D + +L+++M+E G Y+ +M YT G EK V +KE G
Sbjct: 396 IYAHCQICNMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGF 455
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAI 263
P SY IN Y ++S + +M S I + TYS + N ++ LK+ A
Sbjct: 456 FPSVISYGCLINLYTKVGKVSKALEI-SKMMKMSGIKHNMKTYSMLINGFL--KLKDWAN 512
Query: 264 IYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITML 321
+ ED D + YN++I+ + +GN D + + + + R ++ ++
Sbjct: 513 AF-SVFEDFTKDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPII 571
Query: 322 GSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKT 381
+ GE+ A ++ + S N ++LG +K + KA A+L E+ G
Sbjct: 572 HGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAGVG 631
Query: 382 PTPNSWSIIAAGYADKNNMEKAFE 405
P ++++ + GYA + EKAF+
Sbjct: 632 PNEHTYTTLMQGYASLGDTEKAFQ 655
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 117/253 (46%), Gaps = 5/253 (1%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I L +++ A+ + + M+ G+ + H + + + E A YF L +E
Sbjct: 605 LILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTVLRNEG 664
Query: 135 -KVD-KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
++D Y ALL + G + +L++ ++M + YN ++ + G +
Sbjct: 665 LEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAA 724
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
D++ M++ G+ PD +Y IN+ ++ ++QEME+ S I + TY+T+ N
Sbjct: 725 DLMQQMRKEGLLPDIHTYTSFINACCKAGDMQKATEIIQEMEA-SGIKPNLKTYTTLING 783
Query: 253 YIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQ 312
+ A + EKA+ ++ + + D Y+ L++ S + + GL + C++
Sbjct: 784 WARASMPEKALSCFEEMK-LAGFKPDKAVYHCLVTSLLSRATFAQSYVYSGLLSV-CREM 841
Query: 313 LNRDYITMLGSLV 325
+ + I +G+ V
Sbjct: 842 IESEMIVDMGTAV 854
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 124/306 (40%), Gaps = 43/306 (14%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
K YG ++ Y R G + + + M+ G S+ Y+ ++ Y E+ +
Sbjct: 285 KEYGLMVKYYGRRGDMHHARQTFESMRARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRK 344
Query: 198 MKENGVPPDNFSYRICINSYG--------------ARSELSSM----------------- 226
MKE G+ +Y I + + A+ +L S+
Sbjct: 345 MKEEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYAHCQICN 404
Query: 227 ----ENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY---LKKCEDIVSKSKDA 279
E +++EME Q I Y T+ + Y + G +EK +I LK+C S
Sbjct: 405 MDRAEALVREMEEQG-IDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPS----V 459
Query: 280 LGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEE 339
+ Y LI+ Y +G + ++ + K+ K + Y ++ +K+ + A + E+
Sbjct: 460 ISYGCLINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFED 519
Query: 340 WELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNN 399
+ D + N I+ + G +++A +++++ K+ PT ++ I G+A
Sbjct: 520 FTKDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGE 579
Query: 400 MEKAFE 405
M +A E
Sbjct: 580 MRRALE 585
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/327 (18%), Positives = 139/327 (42%), Gaps = 10/327 (3%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLN-DEDKVDK-LYGALLN 145
AL++S+ M G+ ++ +++ ++ K++ +A + F D K D LY ++
Sbjct: 478 ALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIIT 537
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
+ G +D ++ ++++M++ + + I+ + G+ + ++ M+ +G P
Sbjct: 538 AFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIP 597
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
+Y I + +++ +L EM + + + + TY+T+ Y G EKA Y
Sbjct: 598 TVHTYNALILGLVEKRQMTKAVAILDEM-NVAGVGPNEHTYTTLMQGYASLGDTEKAFQY 656
Query: 266 LKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD---YITMLG 322
+ D Y L+ G M + K K + R+ Y ++
Sbjct: 657 FTVLRN-EGLEIDVYTYEALLKSCCKSG---RMQSALAVTKEMSAKNIPRNTFVYNILID 712
Query: 323 SLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTP 382
+ G++ EA ++++ D + + G ++KA +++E+ G P
Sbjct: 713 GWARRGDVWEAADLMQQMRKEGLLPDIHTYTSFINACCKAGDMQKATEIIQEMEASGIKP 772
Query: 383 TPNSWSIIAAGYADKNNMEKAFECMKE 409
+++ + G+A + EKA C +E
Sbjct: 773 NLKTYTTLINGWARASMPEKALSCFEE 799
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 79/181 (43%), Gaps = 2/181 (1%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
+LD+ + G +E +++ S + A Q + +GL V+ + L
Sbjct: 621 ILDEMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCC 680
Query: 116 KVRGLESAETYFNSLNDED--KVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
K ++SA ++ ++ + +Y L++ + R G V E+ LMQ+M++ G
Sbjct: 681 KSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGLLPDIH 740
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
Y + G +K +++ +M+ +G+ P+ +Y IN + S + +EM
Sbjct: 741 TYTSFINACCKAGDMQKATEIIQEMEASGIKPNLKTYTTLINGWARASMPEKALSCFEEM 800
Query: 234 E 234
+
Sbjct: 801 K 801
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 178/420 (42%), Gaps = 48/420 (11%)
Query: 5 LFSTIFNNKRNFTKTNLEIFTRAY-RAVKPVARNNLYSRISPLGDPD-VSLTPVLDQWVL 62
LF+ IF + + T I R A KPV L ++ P+ V+ V+ +
Sbjct: 103 LFADIFRLRLPLSTTTFNIMLRHLCTAGKPVRALELLRQMP---SPNAVTYNTVIAGFCA 159
Query: 63 EGQKISELELQRVIRQLR--SRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGL 120
G+ + +E+ R +R+ + ++ +A +S W +GKV
Sbjct: 160 RGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCK-----------------VGKV--- 199
Query: 121 ESAETYFNSLNDEDKVDK---LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNG 177
E A F+ + E KV+ +Y AL+ Y +G ++ +L +M + G + YN
Sbjct: 200 EDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNL 259
Query: 178 IMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS 237
+ G+ + ++ +M E G+ PD F+Y I IN Y + + + M +
Sbjct: 260 FVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGK- 318
Query: 238 HISMDWGTYSTVANYY-IIAGLKEKAIIYL--KKCEDIVSKS--KDALGYNHLISHYASL 292
G +TV Y +I L K ++ + D V + D YN LI+ + +
Sbjct: 319 ------GIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTG 372
Query: 293 GNKDEMMKFWGLQKIKCKKQLNRD---YITMLGSLVKIGELEEAEKMLEEWELSCYCYDF 349
G+ D + G + KK++ D Y T++ L +G L+EA ++EE D
Sbjct: 373 GDMDRAFEIMGEME---KKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDL 429
Query: 350 RVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
N ++ GYS KG I+ A V E++ KG PT +++ + G A + +KE
Sbjct: 430 VSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKE 489
>gi|297849764|ref|XP_002892763.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297338605|gb|EFH69022.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 804
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/397 (22%), Positives = 179/397 (45%), Gaps = 30/397 (7%)
Query: 105 HDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQK 162
H ++ +D + + + LE A + + +D + + ++++ Y + G VD + S
Sbjct: 207 HTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFFCT 266
Query: 163 MKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSE 222
+ + G S ++N ++ G + ++ DM ++GV PD+ +Y I + +
Sbjct: 267 VLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLLGM 326
Query: 223 LSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS---KDA 279
+S V+Q+M + +S D TY+ + G + +I LK D++S+ K
Sbjct: 327 ISGAGEVIQDMLDKG-LSPDVITYTILLCGQCQLGNIDMGLILLK---DMLSRGFELKSI 382
Query: 280 LGYNHLISHYASLGNKDEMMK-FWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLE 338
+ Y+ ++S G DE + F+ L+ L Y ++ L K+G+ + A ++ +
Sbjct: 383 IPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVA-YSIVIHGLCKLGKFDMAVRVYD 441
Query: 339 EWELSCYCYDFRVPN-----IILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAG 393
E CY +PN I+LG QKGM+ +A ++L ++ G T ++I+ G
Sbjct: 442 EM-----CYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDG 496
Query: 394 YADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK 453
YA +E+A E K A+ P + +S++ +++ E + +K+
Sbjct: 497 YAKSGCIEEALELFKVAI-----ESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLY 551
Query: 454 --VQKRNMYHALTEAHIRSG--QEVDGLLESMKADDI 486
V Y L +A+ G + ++ L MKA+ I
Sbjct: 552 GLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGI 588
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 151/361 (41%), Gaps = 58/361 (16%)
Query: 77 RQLRSRKRFKHA----LQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLND 132
++LR F+H+ L VS +GQ + V L+ + + G + E NS
Sbjct: 83 KELRDIYGFRHSRFSTLLVSHIFAGQR---RFKELQVILEQLLQEEG-KLCELLSNSFRK 138
Query: 133 EDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+ ++ LL R +VDESL +++KMK+ S +YN ++
Sbjct: 139 WESTGLVWDMLLFLSSRLRMVDESLYILKKMKDRNLNVSTQSYNSVL------------- 185
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
+++R E M +V +E++ ++ TYSTV +
Sbjct: 186 ---------------YNFR----------ETDKMWDVYKEIKDKNE-----HTYSTVVDG 215
Query: 253 YIIAGLKEKAIIYLKKCE--DIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCK 310
E A+++L+ E DI + +N ++S Y LG D M K + +KC
Sbjct: 216 LCRQQKLEDAVLFLRTSEWKDI---GPSVVSFNSIMSSYCKLGFVD-MAKSFFCTVLKCG 271
Query: 311 KQLN-RDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKAD 369
+ + ++ L +G + EA ++ + D NI++ G+ GMI A
Sbjct: 272 LVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLLGMISGAG 331
Query: 370 AVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSS 429
V+++++ KG +P +++I+ G N++ +K+ L+ E K P ++S
Sbjct: 332 EVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIPYSVMLSG 391
Query: 430 I 430
+
Sbjct: 392 L 392
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 13/125 (10%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ +L+ Y + + E+ ++ +K G S ++Y +M Y N G + I ++ +MK
Sbjct: 525 FNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMK 584
Query: 200 ENGVPPDNFSYRICI------------NSYGARSELSSMENVLQEMESQSHISMDWGTYS 247
G+PP N +Y + N L +VL++MES+ I+ D TY+
Sbjct: 585 AEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRERILEKFNHVLRDMESEG-ITPDQITYN 643
Query: 248 TVANY 252
T+ Y
Sbjct: 644 TIIQY 648
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 143/335 (42%), Gaps = 35/335 (10%)
Query: 75 VIRQLRSRKRFKHALQVSEWMS-GQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE 133
VI L +F A++V + M + L S A+ L L K LE+ + ++
Sbjct: 423 VIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSG 482
Query: 134 DKVDK-LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM---CLYTNTGQHE 189
D +D LY +++ Y + G ++E+L L + E G + +N ++ C N +
Sbjct: 483 DTLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEAR 542
Query: 190 KIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTV 249
KI DV+ K G+ P SY +++Y + S+E + +EM+++ I TYS +
Sbjct: 543 KILDVI---KLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEG-IPPTNVTYSVI 598
Query: 250 ANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
+ G K L+ C ++ + + +NH++ S G + + + + + C
Sbjct: 599 FKG-LCRGWK------LENCNQVL-RERILEKFNHVLRDMESEGITPDQITYNTIIQYLC 650
Query: 310 K-KQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKA 368
+ K L+R + E K ++ L + NI++ G I KA
Sbjct: 651 RVKHLSRAF--------------ELFKKMKSQNLDPTSATY---NILIDSLCIYGCIRKA 693
Query: 369 DAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
D L + K+ + + +++ + + K + E A
Sbjct: 694 DRFLYSLQKRNVSLSKFAYTTVIKAHCVKGDPEMA 728
Score = 41.6 bits (96), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 67/350 (19%), Positives = 142/350 (40%), Gaps = 29/350 (8%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +L+ + G VDE+LSL ++ G + Y+ ++ G+ + V +M
Sbjct: 385 YSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMC 444
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ P++ + + + L ++L + S ++D Y+ V + Y +G
Sbjct: 445 YKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGD-TLDIILYNIVIDGYAKSGCI 503
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
E+A+ K + + + +N LI Y N E K + K+ Y T
Sbjct: 504 EEALELFKVAIE-SGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTT 562
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQ------------KGMIEK 367
++ + G ++ E++ E + ++I G + + ++EK
Sbjct: 563 LMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRERILEK 622
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLV 427
+ VL+++ +G TP +++ I ++ +AFE K+ +++ P +
Sbjct: 623 FNHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKM-----KSQNLDPTSATY 677
Query: 428 SSILDWLGDNRDVEEVEAFVSSLKIKVQKRNM------YHALTEAHIRSG 471
+ ++D L + + + F+ SL QKRN+ Y + +AH G
Sbjct: 678 NILIDSLCIYGCIRKADRFLYSL----QKRNVSLSKFAYTTVIKAHCVKG 723
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 164/371 (44%), Gaps = 16/371 (4%)
Query: 108 AVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYG--ALLNCYVREGLVDESLSLMQKMKE 165
+ + ++G++ +E A+ F + +E + +Y AL++ Y R G DE++ + + MK
Sbjct: 189 SAMISILGRLGQVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKS 248
Query: 166 MGSFGSALNYNGIMCLYTNTG-QHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELS 224
G + + YN ++ G + ++ +M NGV PD ++ + G
Sbjct: 249 SGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWE 308
Query: 225 SMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC--EDIVSKSKDALGY 282
+ N+ EM + I D TY+T+ + G + A + + + I+ + + Y
Sbjct: 309 AARNLFSEMLYRG-IEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIM---PNVVTY 364
Query: 283 NHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWEL 342
+ +I YA G DE + + K Y T+L K+G EEA + +E E
Sbjct: 365 STVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMES 424
Query: 343 SCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEK 402
S D N +L GY ++G E+ V +E+ + P ++S + Y+ ++
Sbjct: 425 SGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQE 484
Query: 403 AFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNM--Y 460
A E +E + + L S+++D L N VE +F+ + + + N+ Y
Sbjct: 485 AMEVFREF-----KKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTY 539
Query: 461 HALTEAHIRSG 471
+++ +A RSG
Sbjct: 540 NSIIDAFGRSG 550
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 147/319 (46%), Gaps = 9/319 (2%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGK--VRGLESAETYFNSLNDEDKVDKL-YGALL 144
A++V E M GL ++ + +D GK V +AE + L + + D++ + +LL
Sbjct: 239 AIKVFETMKSSGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLL 298
Query: 145 NCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVP 204
R GL + + +L +M G YN ++ GQ + ++ +M +
Sbjct: 299 AVCGRGGLWEAARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIM 358
Query: 205 PDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAII 264
P+ +Y I+ Y L N+ EM+ S I +D +Y+T+ + Y G E+A+
Sbjct: 359 PNVVTYSTVIDGYAKAGRLDEALNLFNEMKFAS-IGLDRVSYNTLLSIYAKLGRFEEALN 417
Query: 265 YLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR--DYITMLG 322
K+ E K KDA+ YN L+ Y G +E+ + + +++K ++ Y T++
Sbjct: 418 VCKEMESSGIK-KDAVTYNALLGGYGKQGKYEEVKRVF--EEMKAERIFPNLLTYSTLID 474
Query: 323 SLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTP 382
K G +EA ++ E++ + D + + ++ + G++E A + L E+ K+G P
Sbjct: 475 VYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRP 534
Query: 383 TPNSWSIIAAGYADKNNME 401
+++ I + + E
Sbjct: 535 NVVTYNSIIDAFGRSGSAE 553
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ALL Y ++G +E + ++MK F + L Y+ ++ +Y+ G +++ +V + K
Sbjct: 434 YNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFK 493
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ G+ D Y I++ + S + L EM ++ I + TY+++ + + +G
Sbjct: 494 KAGLKADVVLYSALIDALCKNGLVESAVSFLDEM-TKEGIRPNVVTYNSIIDAFGRSGSA 552
Query: 260 EKAI 263
E I
Sbjct: 553 ECVI 556
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 104/434 (23%), Positives = 197/434 (45%), Gaps = 28/434 (6%)
Query: 52 SLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDH--AV 109
S +L++W Q + + ++R+L +R ++ ALQ EWM QG S ++
Sbjct: 147 STALLLEKW--SHQLVGLEDFPYLLRELGNRGEWERALQGYEWMVQQGHLRSEWSKLASI 204
Query: 110 QLDLIGKVRGLESAETYFNSLNDEDKVDKLYG--ALLNCYVREGLVDESLSLMQKMKEMG 167
+ +G++ +E A FN + +Y A+++ Y R G E+L + Q MK+ G
Sbjct: 205 MISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAG 264
Query: 168 SFGSALNYNGIMCLYTNTG-QHEKIPDVLLDMKENGVPPDNFSYR--ICINSYGARSELS 224
+ + YN I+ G +K D+ +M++ GV PD ++ I + S G+ E S
Sbjct: 265 CKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDS 324
Query: 225 SMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA--IIYLKKCEDIVSKSKDALGY 282
+ V EM+ + I D TY+T+ + G E A I+ + ++I S + + Y
Sbjct: 325 --QRVFAEMQRRG-IEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNI---SPNVVTY 378
Query: 283 NHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWEL 342
+ +I Y LG +E + + K + Y T++ K+G ++A ++ E
Sbjct: 379 STMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMER 438
Query: 343 SCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEK 402
D N ++ Y ++G + A + ++ +G P ++S + Y+ K M
Sbjct: 439 VGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYS-KAGMH- 496
Query: 403 AFECMKEALAVHEENKFWRPKPSLV--SSILDWLGDNRDVEEVEAFVSSLKIKVQKRNM- 459
++A ++ E K KP +V SS++D VE+ + + + N+
Sbjct: 497 -----QDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIV 551
Query: 460 -YHALTEAHIRSGQ 472
Y++L +A+ R+GQ
Sbjct: 552 TYNSLIDAYGRNGQ 565
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 107/242 (44%), Gaps = 22/242 (9%)
Query: 30 AVKP--VARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKH 87
V+P V+ N L + LG D +LT D + G K + +I + ++K
Sbjct: 405 GVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERV-GLKADVVTYNALIDAYGKQGKYKD 463
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED-KVDK-LYGALLN 145
A + + M +GL +V ++ +D K + A + F K D LY +L++
Sbjct: 464 AAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLID 523
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
+ GLV++++ L+Q+M + G + + YN ++ Y GQ + + + + +P
Sbjct: 524 SCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQVDNV-----EAAKGNMPI 578
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA--GLKEKAI 263
+ F N G R S E + + + SQ + + G + V+ ++ + GLK +
Sbjct: 579 NVF------NKVGDR----STEIICKTLTSQQNANDHTGVLAAVSVFHEMQQFGLKPNVV 628
Query: 264 IY 265
+
Sbjct: 629 TF 630
>gi|255551665|ref|XP_002516878.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543966|gb|EEF45492.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 714
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 161/338 (47%), Gaps = 20/338 (5%)
Query: 83 KRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGK-VRGLESAETYFNSLNDEDK--VDKL 139
+R+ A +V E M Q ++ ++ + ++ K R + A +F +N + ++
Sbjct: 276 QRYDDACKVYEAMEAQNVSPDHVTCSIMITMMRKNGRSAKEAWEFFEKMNRKGVKWSPEI 335
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
GAL+ + EGL +E+L + +M + G+F +A+ YN +M Y + Q E++ + +MK
Sbjct: 336 LGALVKSFCDEGLKNEALIIQVEMAKKGAFSNAIVYNTLMDAYNKSNQIEEVEGIFAEMK 395
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYY----II 255
G+ P + ++ I +++Y R + +E +L EM+ + + D +Y+ + + Y +
Sbjct: 396 AKGLKPTSATFNILMDAYSRRMQPEIVEELLLEMQD-AGLQPDAKSYTCLISAYGRQNKM 454
Query: 256 AGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLG-NKDEMMKFWGLQKIKCKKQLN 314
+ A + +KK V + Y LI Y+ G ++ F +Q K +
Sbjct: 455 TDMAANAFLRMKK----VGIKPTSHSYTALIHAYSVSGWHEKAYSTFENMQTEGIKPSIE 510
Query: 315 RDYITMLGSLVKIGELEEAEKMLEEWE--LSCYCYDFRVP-NIILLGYSQKGMIEKADAV 371
Y +L + + G + + ++ W+ +S RV NI+L G++++G +A V
Sbjct: 511 -TYTALLDAFRRSG---DTQTLMRIWKMMMSEKVEGTRVTFNILLDGFAKQGHYVEARDV 566
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
+ E K G PT +++++ YA K + +KE
Sbjct: 567 ISEFGKLGLHPTVMTYNMLMNAYARGGQHSKLPQLLKE 604
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 63/143 (44%), Gaps = 12/143 (8%)
Query: 87 HALQVSEW----------MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE--D 134
HA VS W M +G+ S+ + LD + ++ + + E +
Sbjct: 482 HAYSVSGWHEKAYSTFENMQTEGIKPSIETYTALLDAFRRSGDTQTLMRIWKMMMSEKVE 541
Query: 135 KVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDV 194
+ LL+ + ++G E+ ++ + ++G + + YN +M Y GQH K+P +
Sbjct: 542 GTRVTFNILLDGFAKQGHYVEARDVISEFGKLGLHPTVMTYNMLMNAYARGGQHSKLPQL 601
Query: 195 LLDMKENGVPPDNFSYRICINSY 217
L +M + PD+ +Y I +Y
Sbjct: 602 LKEMATLNLKPDSITYLTMIYAY 624
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 60/128 (46%), Gaps = 1/128 (0%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ALL+ + R G + + + M G+ + +N ++ + G + + DV+ +
Sbjct: 512 YTALLDAFRRSGDTQTLMRIWKMMMSEKVEGTRVTFNILLDGFAKQGHYVEARDVISEFG 571
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ G+ P +Y + +N+Y + S + +L+EM + ++ D TY T+ YI
Sbjct: 572 KLGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMATL-NLKPDSITYLTMIYAYIRVRDF 630
Query: 260 EKAIIYLK 267
+A Y K
Sbjct: 631 RRAFFYHK 638
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/363 (21%), Positives = 160/363 (44%), Gaps = 43/363 (11%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV--DKLYGALLN 145
A ++ + M QG+ + + + L+ K L+ A YF + + + +Y L+
Sbjct: 482 AERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIG 541
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
+ R G++ E+L + +M E G + YN I+ + ++ +M E GV P
Sbjct: 542 GFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFP 601
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
D +++ IN Y ++ + EM Q ++ D TY+T+ + + EK
Sbjct: 602 DFYTFTTLINGYXKDGNMNKAVTLF-EMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVN-- 658
Query: 266 LKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFW------GLQK--IKCK----- 310
+ D++S+ + + Y LI+ Y ++G E + W G + I C
Sbjct: 659 -ELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKG 717
Query: 311 -------------------KQLNRD---YITMLGSLVKIGELEEAEKMLEEWELSCYCYD 348
K + D Y T++ +K ++ A ++ + E S D
Sbjct: 718 YCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPD 777
Query: 349 FRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMK 408
N+IL G+S++G +++A+ ++ +++++G P ++++ + G+ +NN+++AF
Sbjct: 778 VITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHD 837
Query: 409 EAL 411
E L
Sbjct: 838 EML 840
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 140/310 (45%), Gaps = 6/310 (1%)
Query: 99 GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDES 156
G+ +V+ + ++ + K + +E+ +++ + + ++ + Y L+N Y R+GL++E+
Sbjct: 353 GVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEA 412
Query: 157 LSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINS 216
LM M G YN I+ TG++ + VL +M + G+ PD +Y I +
Sbjct: 413 FELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVE 472
Query: 217 YGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS 276
+ E + EM SQ + D ++S + G ++A+ Y + ++ +
Sbjct: 473 CCRNDNMMDAERIFDEMPSQGVVP-DLVSFSALIGLLSKNGCLDQALKYFRDMKN-AGLA 530
Query: 277 KDALGYNHLISHYASLGNKDEMMKFWG-LQKIKCKKQLNRDYITMLGSLVKIGELEEAEK 335
D + Y LI + G E +K + + C + Y T+L L K L EA++
Sbjct: 531 PDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDV-VTYNTILNGLCKEKMLSEADE 589
Query: 336 MLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYA 395
+ E DF ++ GY + G + KA + + ++++ P +++ + G+
Sbjct: 590 LFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFC 649
Query: 396 DKNNMEKAFE 405
+ MEK E
Sbjct: 650 KGSEMEKVNE 659
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 127/306 (41%), Gaps = 44/306 (14%)
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
+LL V+ G VD + + Q++ G + N ++ + E L DM+E
Sbjct: 328 SLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEK 387
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWG--TYSTVANYYIIAG-- 257
GV PD +Y IN+Y R L +E + M+S S + TY+ + N G
Sbjct: 388 GVFPDVVTYNTLINAY-CRQGL--LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKY 444
Query: 258 LKEKAI-----------------IYLKKC-------------EDIVSKS--KDALGYNHL 285
L+ K + I L +C +++ S+ D + ++ L
Sbjct: 445 LRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSAL 504
Query: 286 ISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEW-ELSC 344
I + G D+ +K++ K N Y ++G + G + EA K+ +E E C
Sbjct: 505 IGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGC 564
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA- 403
D N IL G ++ M+ +AD + E+ ++G P +++ + GY NM KA
Sbjct: 565 X-LDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAV 623
Query: 404 --FECM 407
FE M
Sbjct: 624 TLFEMM 629
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+N +++E +D + +L+ KM+ G + YN I+ ++ G+ ++ ++L M
Sbjct: 746 YNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMI 805
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMD 242
E GV PD +Y IN + ++ L V EM + + D
Sbjct: 806 ERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDD 848
Score = 38.5 bits (88), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 80/392 (20%), Positives = 154/392 (39%), Gaps = 72/392 (18%)
Query: 73 QRVIRQLRSR-KRFKHALQVSEWMSGQGLAFSVHDH------------AVQLDLIGK--V 117
QR I + S FKH+LQ +FS H AV L ++ K V
Sbjct: 219 QRFIDSITSNCPNFKHSLQ----------SFSAMIHILVRSRRLPDAQAVILRMVRKSGV 268
Query: 118 RGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNG 177
+E E+ + + ++ L+ YV+ + E + +K G S N
Sbjct: 269 SRVEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNS 328
Query: 178 IMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS 237
++ G + ++ ++ +GV + ++ I IN+ ++ + ++ L +ME +
Sbjct: 329 LLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKG 388
Query: 238 HISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDAL-----GYNHLISHYASL 292
+ D TY+T+ N Y GL E+A E + S S L YN +I+
Sbjct: 389 -VFPDVVTYNTLINAYCRQGLLEEAF------ELMDSMSGKGLKPCVFTYNAIINGLCKT 441
Query: 293 GNK-------DEMMKF--------WGLQKIKCKKQLNR--------------------DY 317
G DEM+K + + ++C + N +
Sbjct: 442 GKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSF 501
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
++G L K G L++A K + + + D + I++ G+ + G++ +A V E+++
Sbjct: 502 SALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLE 561
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
+G +++ I G + + +A E E
Sbjct: 562 QGCXLDVVTYNTILNGLCKEKMLSEADELFTE 593
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 156/358 (43%), Gaps = 50/358 (13%)
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
L+NC R VD S+S++ KM ++G A+ +N ++ N G+ ++ ++ +M + G
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
P+ SY IN S +V ++ME Q+ + TYST+ + L A
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKME-QNGCKPNVVTYSTIIDSLCKDRLVNDA 252
Query: 263 IIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD---- 316
+ +L ++V + + YN ++ + +LG +E + + K+ + RD
Sbjct: 253 MEFL---SEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLF-------KEMVGRDVMPN 302
Query: 317 ---YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
+ ++ L K G + EA + E D N ++ GY + ++ +A V +
Sbjct: 303 TVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFE 362
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECM-------------------------- 407
+++KG P +S++I+ GY M++A +
Sbjct: 363 IMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLG 422
Query: 408 --KEALAVHEENKFWRPKPSLVSSI--LDWLGDNRDVEEVEAFVSSLKIKVQKRNMYH 461
KEAL + +E + P P+LV+ + LD + ++E + S+K K + N+ H
Sbjct: 423 RPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVH 480
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 154/344 (44%), Gaps = 16/344 (4%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQG-LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE 133
VI SR R + AL + M +G +A + + + + KV ++ A F+ + +
Sbjct: 525 VIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTK 584
Query: 134 DKVDK---LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEK 190
+V +Y AL+ Y +G +D +L +M E G + YN ++ G+ +
Sbjct: 585 GEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTE 644
Query: 191 IPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVA 250
+++ +M G+ PD F+Y I IN + + + + M + G +TV
Sbjct: 645 AYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRR-------GVRATVV 697
Query: 251 NYY-IIAGLKEKAIIYL--KKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQ 305
Y +I L +K + K ++ V + D + YN LI+ +++ GN D + G
Sbjct: 698 TYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 757
Query: 306 KIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMI 365
+ K + Y T++ L +G ++EA K+++E D N ++ GYS KG +
Sbjct: 758 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDV 817
Query: 366 EKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
+ A + E++ KG PT +++ + G + A +KE
Sbjct: 818 KDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKE 861
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 114/285 (40%), Gaps = 41/285 (14%)
Query: 58 DQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKV 117
D+ V G ++ ++ L R A ++ E M G+GLA V
Sbjct: 615 DRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT----------- 663
Query: 118 RGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNG 177
Y L+N + +EG V ++L + + M G + + Y
Sbjct: 664 ----------------------YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTA 701
Query: 178 IMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS 237
++ + GQ ++ + + G+ PD Y INS+ + ++ EME +
Sbjct: 702 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME-KK 760
Query: 238 HISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK---SKDALGYNHLISHYASLGN 294
I+ D TY+T+ + G ++A +K D +++ D + YN LIS Y+ G+
Sbjct: 761 RIAPDDVTYNTLMRGLCLLGRVDEA----RKLIDEMTERGIQPDLVTYNTLISGYSMKGD 816
Query: 295 KDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEE 339
+ ++ K Y ++ L K G+ ++AE M++E
Sbjct: 817 VKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKE 861
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/275 (19%), Positives = 118/275 (42%), Gaps = 14/275 (5%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ +L G +L L+++M +A+ YN ++ + + G+ + D++ +M+
Sbjct: 491 FNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMR 546
Query: 200 E-NGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
E G+ P+ ++Y I+ + + V EM ++ + + Y+ + Y G
Sbjct: 547 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 606
Query: 259 KEKAIIYLKK-CEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
+ A++Y + E V+ + YN L+ G E + L + K L D
Sbjct: 607 LDTALLYRDRMVERGVAMT--VATYNLLVHALFMDGRGTEA---YELVEEMGGKGLAPDV 661
Query: 318 IT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
T ++ K G +++A ++ E ++ S+KG +++ D + E
Sbjct: 662 FTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDE 721
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
V++G P ++ + ++ N+++AFE M E
Sbjct: 722 AVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 756
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 99/210 (47%), Gaps = 6/210 (2%)
Query: 205 PDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAII 264
P+ +Y I + +R + + ++++EM + I+ + TY TV + + G ++A+
Sbjct: 517 PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV- 575
Query: 265 YLKKCEDIVSKSK---DALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITML 321
K +++++K + +A+ YN LI Y G D + + + Y ++
Sbjct: 576 --KVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLV 633
Query: 322 GSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKT 381
+L G EA +++EE D NI++ G+ ++G ++KA + + + ++G
Sbjct: 634 HALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVR 693
Query: 382 PTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
T +++ + + K +++ + EA+
Sbjct: 694 ATVVTYTALIYALSKKGQVQETDKLFDEAV 723
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L++ Y +G V ++L + +M G + L YN ++ GQ + +++ +M
Sbjct: 804 YNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMV 863
Query: 200 ENGVPPDNFSY 210
ENG+ PD+ +Y
Sbjct: 864 ENGITPDDSTY 874
>gi|359486048|ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic [Vitis vinifera]
gi|298204537|emb|CBI23812.3| unnamed protein product [Vitis vinifera]
Length = 659
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 95/437 (21%), Positives = 192/437 (43%), Gaps = 56/437 (12%)
Query: 71 ELQRVIRQLRSRKRFKHALQVSEWMSG-QGLAFSVHDHAVQLDLIGKVRGLESAETYFNS 129
+L ++R R++ Q+ +WM + + FS ++ + +GK A +NS
Sbjct: 103 DLNVILRHFGKLCRWQDLSQLFDWMQKHEKITFS--SYSTYIKFMGKSLNPIKALEIYNS 160
Query: 130 LNDEDKVD--KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM--CLYTNT 185
+ DE + + ++L+C +R G + SL L +MK+ G A+ Y+ ++ C+
Sbjct: 161 IQDESVRNNVSVCNSVLSCLIRNGKFENSLKLFHQMKQDGLRPDAVTYSTLLAGCMKVKH 220
Query: 186 G-----------QHEKIP-----------------------DVLLDMKENGVPPDNFSYR 211
G + ++P + MK+ G P+ F Y
Sbjct: 221 GYSKALELVQEMERSRLPMDSVIYGTLLAVCASNNRCKEAENYFNQMKDEGHLPNVFHYS 280
Query: 212 ICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCED 271
+N+Y A + + ++Q+M+S + + +T+ Y+ GL EK+ L + ED
Sbjct: 281 SLLNAYSADGDYKKADMLVQDMKSAGLVP-NKVILTTLLKVYVRGGLFEKSRELLAELED 339
Query: 272 IVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD---YITMLGSLVKIG 328
+ ++D + Y L+ L +++ + + KKQ+ D Y M+ + + G
Sbjct: 340 L-GYAEDEMPYCLLMD---GLAKSRRILEAKSIFEEMKKKQVKSDGYCYSIMISAFCRSG 395
Query: 329 ELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWS 388
L+EA+++ ++E + YD + N +L Y + G +E +++++ + +P N++
Sbjct: 396 LLKEAKQLARDFEATYDKYDLVMLNTMLCAYCRAGEMESVMQMMRKMDELAISPDWNTFH 455
Query: 389 IIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVS 448
I+ + + A+ M++ NK +P+ L SS++ LG R +AF
Sbjct: 456 ILIKYFCKEKLYLLAYRTMEDM-----HNKGHQPEEELCSSLISHLGKIR--AHSQAFSV 508
Query: 449 SLKIKVQKRNMYHALTE 465
++ KR M AL E
Sbjct: 509 YNMLRYSKRTMCKALHE 525
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 141/310 (45%), Gaps = 6/310 (1%)
Query: 99 GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDES 156
G+ +V+ + ++ + K + +E+ +++ + + ++ + Y L+N Y R+GL++E+
Sbjct: 92 GVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEA 151
Query: 157 LSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINS 216
LM M G YN I+ TG++ + VL +M + G+ PD +Y I +
Sbjct: 152 FELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVE 211
Query: 217 YGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS 276
+ E + EM SQ + D ++S + G ++A+ Y + ++ +
Sbjct: 212 CCRNDNMMDAERIFDEMPSQGVVP-DLVSFSALIGLLSKNGCLDQALKYFRDMKN-AGLA 269
Query: 277 KDALGYNHLISHYASLGNKDEMMKFWG-LQKIKCKKQLNRDYITMLGSLVKIGELEEAEK 335
D + Y LI + G E +K + + C + Y T+L L K L EA++
Sbjct: 270 PDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDV-VTYNTILNGLCKEKMLSEADE 328
Query: 336 MLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYA 395
+ E DF ++ GYS+ G + KA + + ++++ P +++ + G+
Sbjct: 329 LFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFC 388
Query: 396 DKNNMEKAFE 405
+ MEK E
Sbjct: 389 KGSEMEKVNE 398
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 160/363 (44%), Gaps = 43/363 (11%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV--DKLYGALLN 145
A ++ + M QG+ + + + L+ K L+ A YF + + + +Y L+
Sbjct: 221 AERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIG 280
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
+ R G++ E+L + +M E G + YN I+ + ++ +M E GV P
Sbjct: 281 GFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFP 340
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
D +++ IN Y ++ L EM Q ++ D TY+T+ + + EK
Sbjct: 341 DFYTFTTLINGYSKDGNMNKAV-TLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVN-- 397
Query: 266 LKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFW------GLQK--IKCK----- 310
+ D++S+ + + Y LI+ Y ++G E + W G + I C
Sbjct: 398 -ELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKG 456
Query: 311 -------------------KQLNRD---YITMLGSLVKIGELEEAEKMLEEWELSCYCYD 348
K + D Y T++ +K ++ A ++ + E S D
Sbjct: 457 YCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPD 516
Query: 349 FRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMK 408
N+IL G+S++G +++A+ ++ +++++G P ++++ + G+ +NN+++AF
Sbjct: 517 VITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHD 576
Query: 409 EAL 411
E L
Sbjct: 577 EML 579
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 140/341 (41%), Gaps = 50/341 (14%)
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
+LL V+ G VD + + Q++ G + N ++ + E L DM+E
Sbjct: 67 SLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEK 126
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWG--TYSTVANYYIIAG-- 257
GV PD +Y IN+Y R L +E + M+S S + TY+ + N G
Sbjct: 127 GVFPDVVTYNTLINAY-CRQGL--LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKY 183
Query: 258 LKEKAI-----------------IYLKKC-------------EDIVSKS--KDALGYNHL 285
L+ K + I L +C +++ S+ D + ++ L
Sbjct: 184 LRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSAL 243
Query: 286 ISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCY 345
I + G D+ +K++ K N Y ++G + G + EA K+ +E
Sbjct: 244 IGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGC 303
Query: 346 CYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA-- 403
D N IL G ++ M+ +AD + E+ ++G P +++ + GY+ NM KA
Sbjct: 304 VLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVT 363
Query: 404 -FECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEV 443
FE M + + +P ++++D ++E+V
Sbjct: 364 LFEMMIQ--------RNLKPDVVTYNTLIDGFCKGSEMEKV 396
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+N +++E +D + +L+ KM+ G + YN I+ ++ G+ ++ ++L M
Sbjct: 485 YNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMI 544
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMD 242
E GV PD +Y IN + ++ L V EM + + D
Sbjct: 545 ERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDD 587
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 154/344 (44%), Gaps = 16/344 (4%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQG-LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE 133
VI SR R + AL + M +G +A + + + + KV ++ A F+ + +
Sbjct: 520 VIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTK 579
Query: 134 DKVDK---LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEK 190
+V +Y AL+ Y +G +D +L +M E G + YN ++ G+ +
Sbjct: 580 GEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTE 639
Query: 191 IPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVA 250
+++ +M G+ PD F+Y I IN + + + + M + G +TV
Sbjct: 640 AYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRR-------GVRATVV 692
Query: 251 NYY-IIAGLKEKAIIYL--KKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQ 305
Y +I L +K + K ++ V + D + YN LI+ +++ GN D + G
Sbjct: 693 TYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 752
Query: 306 KIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMI 365
+ K + Y T++ L +G ++EA K+++E D N ++ GYS KG +
Sbjct: 753 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDV 812
Query: 366 EKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
+ A + E++ KG PT +++ + G + A +KE
Sbjct: 813 KDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKE 856
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 114/285 (40%), Gaps = 41/285 (14%)
Query: 58 DQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKV 117
D+ V G ++ ++ L R A ++ E M G+GLA V
Sbjct: 610 DRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVF------------ 657
Query: 118 RGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNG 177
Y L+N + +EG V ++L + + M G + + Y
Sbjct: 658 ---------------------TYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTA 696
Query: 178 IMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS 237
++ + GQ ++ + + G+ PD Y INS+ + ++ EME +
Sbjct: 697 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME-KK 755
Query: 238 HISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK---SKDALGYNHLISHYASLGN 294
I+ D TY+T+ + G ++A +K D +++ D + YN LIS Y+ G+
Sbjct: 756 RIAPDDVTYNTLMRGLCLLGRVDEA----RKLIDEMTERGIQPDLVTYNTLISGYSMKGD 811
Query: 295 KDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEE 339
+ ++ K Y ++ L K G+ ++AE M++E
Sbjct: 812 VKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKE 856
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/275 (19%), Positives = 118/275 (42%), Gaps = 14/275 (5%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ +L G +L L+++M +A+ YN ++ + + G+ + D++ +M+
Sbjct: 486 FNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMR 541
Query: 200 E-NGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
E G+ P+ ++Y I+ + + V EM ++ + + Y+ + Y G
Sbjct: 542 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 601
Query: 259 KEKAIIYLKK-CEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
+ A++Y + E V+ + YN L+ G E + L + K L D
Sbjct: 602 LDTALLYRDRMVERGVAMT--VATYNLLVHALFMDGRGTEA---YELVEEMGGKGLAPDV 656
Query: 318 IT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
T ++ K G +++A ++ E ++ S+KG +++ D + E
Sbjct: 657 FTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDE 716
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
V++G P ++ + ++ N+++AFE M E
Sbjct: 717 AVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 751
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 99/210 (47%), Gaps = 6/210 (2%)
Query: 205 PDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAII 264
P+ +Y I + +R + + ++++EM + I+ + TY TV + + G ++A+
Sbjct: 512 PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV- 570
Query: 265 YLKKCEDIVSKSK---DALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITML 321
K +++++K + +A+ YN LI Y G D + + + Y ++
Sbjct: 571 --KVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLV 628
Query: 322 GSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKT 381
+L G EA +++EE D NI++ G+ ++G ++KA + + + ++G
Sbjct: 629 HALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVR 688
Query: 382 PTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
T +++ + + K +++ + EA+
Sbjct: 689 ATVVTYTALIYALSKKGQVQETDKLFDEAV 718
Score = 38.5 bits (88), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L++ Y +G V ++L + +M G + L YN ++ GQ + +++ +M
Sbjct: 799 YNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMV 858
Query: 200 ENGVPPDNFSY 210
ENG+ PD+ +Y
Sbjct: 859 ENGITPDDSTY 869
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/409 (22%), Positives = 176/409 (43%), Gaps = 22/409 (5%)
Query: 83 KRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESA-----ETYFNSLNDEDKVD 137
+ A ++ + M + LA +V ++V ++ + + L+ E N L V
Sbjct: 404 QNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVV- 462
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
Y L+ + +EG V+ES ++++M+E G YN ++ + + E+ L++
Sbjct: 463 --YTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLME 520
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
M E + P+ +Y I+ Y E+ + EM S + + G Y+ + + G
Sbjct: 521 MLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLP-NVGIYTALIEGHCKEG 579
Query: 258 LKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR 315
+A + I+S+ +D Y+ LI + G E + + K
Sbjct: 580 NVTEAFSVFRF---ILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAF 636
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
Y +++ K G +++A ++LEE + D NI++ G + G IE+A + +I
Sbjct: 637 TYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDI 696
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLG 435
+G TP +++ + GY N AF+ ++E L + P + + IL++
Sbjct: 697 EGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLL-----RGVPPDAFIYNVILNFCC 751
Query: 436 DNRDVEE-VEAFVSSLKIKVQKRNMYHALTEAHIRSG--QEVDGLLESM 481
E+ ++ F L+ ++ L E + +SG QE + LLE M
Sbjct: 752 KEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEM 800
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/364 (21%), Positives = 158/364 (43%), Gaps = 31/364 (8%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y AL++ ++R+G ++++ + +M G + + +N ++ G+ EK +++ +M
Sbjct: 323 YNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMM 382
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E GV PD+ +Y + I + ++ +L EM+ + ++ TYS + N G
Sbjct: 383 EKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRK-LAPTVLTYSVIINGLCRCGNL 441
Query: 260 EKAIIYLKKCEDIVSKSK-DALGYNHLISHYASLGNKD------EMMKFWG-LQKIKCKK 311
+ L+ E +++ K +A+ Y L++ +A G + E M+ G L + C
Sbjct: 442 QGTNAILR--EMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFC-- 497
Query: 312 QLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAV 371
Y +++ K +EEA L E + + GYS+ G +E AD
Sbjct: 498 -----YNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRY 552
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA--VHEENKFWRPKPSLVSS 429
E++ G P ++ + G+ + N+ +AF + L+ V ++ + + S
Sbjct: 553 FNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTY-------SV 605
Query: 430 ILDWLGDNRDVEEVEAFVSSLKIKVQKRN--MYHALTEAHIRSGQ--EVDGLLESMKADD 485
++ L N + E S L+ K N Y++L + G + LLE M
Sbjct: 606 LIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKG 665
Query: 486 IDED 489
I+ D
Sbjct: 666 INPD 669
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 129/319 (40%), Gaps = 46/319 (14%)
Query: 175 YNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEME 234
Y ++ + G + VLL+M E G P+ +Y + I R+ L L+
Sbjct: 218 YTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGL-CRARLLDEAIELKRSM 276
Query: 235 SQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGN 294
+ D TY + N + + +A + L + D+ K + + YN LI +
Sbjct: 277 VDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKP-EPITYNALIDGF----- 330
Query: 295 KDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNI 354
++ G++E+A ++ +E + + N
Sbjct: 331 ------------------------------MRQGDIEQAFRIKDEMVACGIEANLIIWNT 360
Query: 355 ILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVH 414
+L G + G +EKA +++E+++KG P ++S++ G+ NM +AFE + E
Sbjct: 361 LLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEM---- 416
Query: 415 EENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRN--MYHALTEAHIRSG- 471
+ + P S I++ L +++ A + + + K N +Y L AH + G
Sbjct: 417 -KKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGR 475
Query: 472 -QEVDGLLESMKADDIDED 489
+E +LE M+ I D
Sbjct: 476 VEESRMILERMREQGILPD 494
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 129/282 (45%), Gaps = 21/282 (7%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L++ R G + E+ + +++E G +A YN ++ G +K +L +M
Sbjct: 603 YSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMC 662
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G+ PD +Y I I+ E+ +N+ ++E + ++ + TY+ + + Y +
Sbjct: 663 IKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRG-LTPNCVTYAAMVDGYCKSKNP 721
Query: 260 EKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQL--NR 315
A L E+++ + DA YN +++ +++ K L + +K
Sbjct: 722 TAAFQLL---EEMLLRGVPPDAFIYNVILNFCCK---EEKFEKALDLFQEMLEKGFASTV 775
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNII----LLGYSQK-GMIEKADA 370
+ T++ K G+L+EA +LEE + +PN + L+ ++ K GM+ +A
Sbjct: 776 SFNTLIEGYCKSGKLQEANHLLEEMIEKQF-----IPNHVTYTSLIDHNCKAGMMGEAKR 830
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
+ E+ ++ PT +++ + GY + NM + +E +A
Sbjct: 831 LWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVA 872
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 63/140 (45%), Gaps = 2/140 (1%)
Query: 278 DALGYNHLISHYASLGN-KDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKM 336
D Y ++IS + +GN KD + + C L Y ++G L + L+EA ++
Sbjct: 214 DVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNL-VTYNVIIGGLCRARLLDEAIEL 272
Query: 337 LEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYAD 396
D +I++ G+ + +A +L E++ G P P +++ + G+
Sbjct: 273 KRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMR 332
Query: 397 KNNMEKAFECMKEALAVHEE 416
+ ++E+AF E +A E
Sbjct: 333 QGDIEQAFRIKDEMVACGIE 352
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 32/164 (19%), Positives = 75/164 (45%), Gaps = 3/164 (1%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
+L++ +L G ++ ++F+ AL + + M +G A +V + + ++
Sbjct: 727 LLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTL-IEGYC 785
Query: 116 KVRGLESAETYFNSLNDEDKVDK--LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
K L+ A + ++ + Y +L++ + G++ E+ L +M+E +A
Sbjct: 786 KSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAK 845
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSY 217
Y ++ Y N G ++ + +M G+ PD +Y + I++Y
Sbjct: 846 TYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAY 889
Score = 38.5 bits (88), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 65/325 (20%), Positives = 121/325 (37%), Gaps = 42/325 (12%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL-YGALLNC 146
A Q+ E M +G+ + V L+ K E A F + ++ + + L+
Sbjct: 724 AFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEG 783
Query: 147 YVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPD 206
Y + G + E+ L+++M E + + Y ++ G + + L+M+E V P
Sbjct: 784 YCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPT 843
Query: 207 NFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYL 266
+Y S + Y+ I + E + ++
Sbjct: 844 AKTYT-----------------------------------SLLHGYHNIGNMSEVSALF- 867
Query: 267 KKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSL 324
E++V+K D + Y +I Y GN E K +K Y ++ +L
Sbjct: 868 ---EEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQAL 924
Query: 325 VKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTP 384
K E E K+L E S + ++I G+ G +++A VL+ +VK G
Sbjct: 925 CKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNT 984
Query: 385 NSWSIIAAGYADKNNMEKAFECMKE 409
S + G + N E + +K+
Sbjct: 985 TSLGDLVDGNQNGANSEDSDNLLKQ 1009
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/409 (22%), Positives = 176/409 (43%), Gaps = 22/409 (5%)
Query: 83 KRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESA-----ETYFNSLNDEDKVD 137
+ A ++ + M + LA +V ++V ++ + + L+ E N L V
Sbjct: 395 QNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVV- 453
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
Y L+ + +EG V+ES ++++M+E G YN ++ + + E+ L++
Sbjct: 454 --YTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLME 511
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
M E + P+ +Y I+ Y E+ + EM S + + G Y+ + + G
Sbjct: 512 MLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLP-NVGIYTALIEGHCKEG 570
Query: 258 LKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR 315
+A + I+S+ +D Y+ LI + G E + + K
Sbjct: 571 NVTEAFSVFRF---ILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAF 627
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
Y +++ K G +++A ++LEE + D NI++ G + G IE+A + +I
Sbjct: 628 TYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDI 687
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLG 435
+G TP +++ + GY N AF+ ++E L + P + + IL++
Sbjct: 688 EGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLL-----RGVPPDAFIYNVILNFCC 742
Query: 436 DNRDVEE-VEAFVSSLKIKVQKRNMYHALTEAHIRSG--QEVDGLLESM 481
E+ ++ F L+ ++ L E + +SG QE + LLE M
Sbjct: 743 KEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEM 791
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/364 (21%), Positives = 158/364 (43%), Gaps = 31/364 (8%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y AL++ ++R+G ++++ + +M G + + +N ++ G+ EK +++ +M
Sbjct: 314 YNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMM 373
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E GV PD+ +Y + I + ++ +L EM+ + ++ TYS + N G
Sbjct: 374 EKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRK-LAPTVLTYSVIINGLCRCGNL 432
Query: 260 EKAIIYLKKCEDIVSKSK-DALGYNHLISHYASLGNKD------EMMKFWG-LQKIKCKK 311
+ L+ E +++ K +A+ Y L++ +A G + E M+ G L + C
Sbjct: 433 QGTNAILR--EMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFC-- 488
Query: 312 QLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAV 371
Y +++ K +EEA L E + + GYS+ G +E AD
Sbjct: 489 -----YNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRY 543
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA--VHEENKFWRPKPSLVSS 429
E++ G P ++ + G+ + N+ +AF + L+ V ++ + + S
Sbjct: 544 FNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTY-------SV 596
Query: 430 ILDWLGDNRDVEEVEAFVSSLKIKVQKRN--MYHALTEAHIRSGQ--EVDGLLESMKADD 485
++ L N + E S L+ K N Y++L + G + LLE M
Sbjct: 597 LIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKG 656
Query: 486 IDED 489
I+ D
Sbjct: 657 INPD 660
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 118/278 (42%), Gaps = 15/278 (5%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L++ + G ++ + +L ++ G + + Y ++ Y + +L +M
Sbjct: 664 YNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEML 723
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
GVPPD F Y + +N + ++ QEM + S +++T+ Y +G
Sbjct: 724 LRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV--SFNTLIEGYCKSGKL 781
Query: 260 EKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
++A L E+++ K + + Y LI H G E + W + + + Y
Sbjct: 782 QEANHLL---EEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTY 838
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
++L IG + E + EE D +++ Y ++G + +A + EI+
Sbjct: 839 TSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILV 898
Query: 378 KGKTPTPNSW-------SIIAAGYADKNNMEKAFECMK 408
KG P + + S+IA G+ NM++A E ++
Sbjct: 899 KG-MPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLR 935
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 129/282 (45%), Gaps = 21/282 (7%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L++ R G + E+ + +++E G +A YN ++ G +K +L +M
Sbjct: 594 YSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMC 653
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G+ PD +Y I I+ E+ +N+ ++E + ++ + TY+ + + Y +
Sbjct: 654 IKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRG-LTPNCVTYAAMVDGYCKSKNP 712
Query: 260 EKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQL--NR 315
A L E+++ + DA YN +++ +++ K L + +K
Sbjct: 713 TAAFQLL---EEMLLRGVPPDAFIYNVILNFCCK---EEKFEKALDLFQEMLEKGFASTV 766
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNII----LLGYSQK-GMIEKADA 370
+ T++ K G+L+EA +LEE + +PN + L+ ++ K GM+ +A
Sbjct: 767 SFNTLIEGYCKSGKLQEANHLLEEMIEKQF-----IPNHVTYTSLIDHNCKAGMMGEAKR 821
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
+ E+ ++ PT +++ + GY + NM + +E +A
Sbjct: 822 LWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVA 863
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 99/219 (45%), Gaps = 8/219 (3%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
+L++ +L G ++ ++F+ AL + + M +G A +V + + ++
Sbjct: 718 LLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTL-IEGYC 776
Query: 116 KVRGLESAETYFNSLNDEDKVDK--LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
K L+ A + ++ + Y +L++ + G++ E+ L +M+E +A
Sbjct: 777 KSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAK 836
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSY---GARSELSSM--EN 228
Y ++ Y N G ++ + +M G+ PD +Y + I++Y G E + E
Sbjct: 837 TYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEI 896
Query: 229 VLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLK 267
+++ M +S + T S +A + IAG ++A L+
Sbjct: 897 LVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLR 935
>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 800
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/412 (21%), Positives = 184/412 (44%), Gaps = 24/412 (5%)
Query: 71 ELQRVIRQLRSRKRFKHALQVSEWMSGQGL--AFSVHDHAVQLDLIGKVRGLESAETYFN 128
E VI+ L + K +K A+ + + M+ G+ AF+ + + + + + R + A +
Sbjct: 354 EFNMVIKGLLNDKLWKDAVSLFKEMADSGIPDAFT---YNILIHWLCQRRKIREALNLWE 410
Query: 129 SLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTG 186
+N+ + Y +LL CY G +DE++ L +M G + + Y +M + N
Sbjct: 411 KMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKA 470
Query: 187 QHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTY 246
+K +L +MK+NGV ++++Y IN + + +L+ E++ + TY
Sbjct: 471 AFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAM-TY 529
Query: 247 STVANYYIIAGLKEKAI-IYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQ 305
+++ N +I AG+ A +Y + C + + + Y I Y D +K L
Sbjct: 530 NSIINGFIKAGMMGSAFAVYQQMCAKGI--PPNIVTYTSFIDGYCKTSCCDLALKM--LN 585
Query: 306 KIKCKKQLNRD---YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQK 362
++CK L D Y +++ + G + A ++L + V N + GY
Sbjct: 586 DVRCKG-LRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNL 644
Query: 363 GMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRP 422
M+E+A + ++++K+G +++ + G++ N+ A + E +A K P
Sbjct: 645 KMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVA-----KGNIP 699
Query: 423 KPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRN--MYHALTEAHIRSGQ 472
+++ L N D+++ + + + N MY+ L ++R+G+
Sbjct: 700 DHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGK 751
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 154/344 (44%), Gaps = 16/344 (4%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQG-LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE 133
VI SR R + AL + M +G +A + + + + KV ++ A F+ + +
Sbjct: 78 VIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTK 137
Query: 134 DKVDK---LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEK 190
+V +Y AL+ Y +G +D +L +M E G + YN ++ G+ +
Sbjct: 138 GEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTE 197
Query: 191 IPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVA 250
+++ +M G+ PD F+Y I IN + + + + M + G +TV
Sbjct: 198 AYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRR-------GVRATVV 250
Query: 251 NYY-IIAGLKEKAIIYL--KKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQ 305
Y +I L +K + K ++ V + D + YN LI+ +++ GN D + G
Sbjct: 251 TYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 310
Query: 306 KIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMI 365
+ K + Y T++ L +G ++EA K+++E D N ++ GYS KG +
Sbjct: 311 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDV 370
Query: 366 EKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
+ A + E++ KG PT +++ + G + A +KE
Sbjct: 371 KDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKE 414
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 114/286 (39%), Gaps = 41/286 (14%)
Query: 58 DQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKV 117
D+ V G ++ ++ L R A ++ E M G+GLA V
Sbjct: 168 DRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT----------- 216
Query: 118 RGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNG 177
Y L+N + +EG V ++L + + M G + + Y
Sbjct: 217 ----------------------YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTS 254
Query: 178 IMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS 237
++ + GQ ++ + + G+ PD Y INS+ + ++ EME +
Sbjct: 255 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME-KK 313
Query: 238 HISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK---SKDALGYNHLISHYASLGN 294
I+ D TY+T+ + G ++A +K D ++K D + YN LIS Y+ G+
Sbjct: 314 RIAPDDVTYNTLMRGLCLLGRVDEA----RKLIDEMTKRGIQPDLVTYNTLISGYSMKGD 369
Query: 295 KDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEW 340
+ ++ K Y ++ L K G+ ++AE M++E
Sbjct: 370 VKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEM 415
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 99/210 (47%), Gaps = 6/210 (2%)
Query: 205 PDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAII 264
P+ +Y I + +R + + ++++EM + I+ + TY TV + + G ++A+
Sbjct: 70 PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV- 128
Query: 265 YLKKCEDIVSKSK---DALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITML 321
K +++++K + +A+ YN LI Y G D + + + Y ++
Sbjct: 129 --KVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLV 186
Query: 322 GSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKT 381
+L G EA +++EE D NI++ G+ ++G ++KA + + + ++G
Sbjct: 187 HALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVR 246
Query: 382 PTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
T +++ + + K +++ + EA+
Sbjct: 247 ATVVTYTSLIYALSKKGQVQETDKLFDEAV 276
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 114/259 (44%), Gaps = 14/259 (5%)
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKE-NGVPPDNFSYRICI 214
+L L+++M +A+ YN ++ + + G+ + D++ +M+E G+ P+ ++Y I
Sbjct: 60 ALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVI 115
Query: 215 NSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKK-CEDIV 273
+ + + V EM ++ + + Y+ + Y G + A++Y + E V
Sbjct: 116 SGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGV 175
Query: 274 SKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT---MLGSLVKIGEL 330
+ + YN L+ G E + L + K L D T ++ K G +
Sbjct: 176 AMT--VATYNLLVHALFMDGRGTEA---YELVEEMGGKGLAPDVFTYNILINGHCKEGNV 230
Query: 331 EEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSII 390
++A ++ E ++ S+KG +++ D + E V++G P ++ +
Sbjct: 231 KKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNAL 290
Query: 391 AAGYADKNNMEKAFECMKE 409
++ N+++AFE M E
Sbjct: 291 INSHSTSGNIDRAFEIMGE 309
Score = 38.5 bits (88), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L++ Y +G V ++L + +M G + L YN ++ GQ + +++ +M
Sbjct: 357 YNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMV 416
Query: 200 ENGVPPDNFSY 210
ENG+ PD+ +Y
Sbjct: 417 ENGITPDDSTY 427
>gi|255660906|gb|ACU25622.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 484
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 191/444 (43%), Gaps = 32/444 (7%)
Query: 67 ISELELQRVIRQLRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAET 125
+S + + V L S K +HALQ W+ L + H ++++G+ L A
Sbjct: 7 VSSFDHELVYNVLHSAKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARC 66
Query: 126 YFNSLN------DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM 179
+ DED ++ +++ Y +EG+V ES+ + QKM+E+G + +YN +
Sbjct: 67 ILLDIPKKGLEWDED----MWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALF 122
Query: 180 CLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHI 239
+ G++ M G+ P ++ + I + ++ + ++M+S+ I
Sbjct: 123 KVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR-EI 181
Query: 240 SMDWGTYSTVAN-YYIIAGLKEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDE 297
S D TY+T+ N YY + ++E +++ K +I + Y LI Y S+ D+
Sbjct: 182 SPDVVTYNTIINGYYRVKKMEEAEKYFVEMKGRNI---EPTVVTYTTLIKGYVSVDQVDD 238
Query: 298 MMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL 357
++ K K Y T+L L ++ EA +L+E + Y + L
Sbjct: 239 ALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMTEARSILKEM-MDKYLAPTDNSIFMRL 297
Query: 358 GYSQ--KGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHE 415
SQ G ++ A VLK +++ + ++ + ++A + + + + E
Sbjct: 298 ISSQCNSGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQYDQAVKLLDKLI---E 354
Query: 416 ENKFWRPK------PSLVSSILDWLGDNRDVEEVEAFVSS-LKIKVQKRNMYHALTEAHI 468
++ RP+ PS + ++++L +N + EA V LK+ VQ + L H
Sbjct: 355 KDIILRPQSTLHLEPSAYNPMIEYLCNNGQAAKAEALVRQLLKLGVQDPTALNTLIRGHS 414
Query: 469 RSGQEVDG--LLESMKADDIDEDK 490
+ G LL+ M +D +K
Sbjct: 415 QEGSPDSAFELLKIMLRRKVDSEK 438
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 163/392 (41%), Gaps = 34/392 (8%)
Query: 65 QKISELELQRVIRQLRS-------RKRFKHALQVSEWMSGQGLAFSVHDHAVQL---DLI 114
QK+ EL ++R I+ + R R+ A + M +G+ + H V + L
Sbjct: 104 QKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLS 163
Query: 115 GKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
GKV E+A +F + + + Y ++N Y R ++E+ +MK +
Sbjct: 164 GKV---ETANRFFEDMKSREISPDVVTYNTIINGYYRVKKMEEAEKYFVEMKGRNIEPTV 220
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQE 232
+ Y ++ Y + Q + ++ +MK G+ P+ +Y + +++ ++L+E
Sbjct: 221 VTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMTEARSILKE 280
Query: 233 MESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASL 292
M + D + + + +G + A LK + S +A Y LI ++
Sbjct: 281 MMDKYLAPTDNSIFMRLISSQCNSGNLDAAADVLKAMIRL-SVPTEAGHYGVLIENFCKA 339
Query: 293 GNKDEMMKFWGLQKIKCKKQLNRD----------YITMLGSLVKIGELEEAEKMLEEWEL 342
G D+ +K L K+ K + R Y M+ L G+ +AE ++ + L
Sbjct: 340 GQYDQAVKL--LDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQAAKAEALVRQL-L 396
Query: 343 SCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEK 402
D N ++ G+SQ+G + A +LK ++++ +++ + Y KN
Sbjct: 397 KLGVQDPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKKNEPAD 456
Query: 403 AFECMKEALAVHEENKFWRPKPSLVSSILDWL 434
A K AL EN P SL S+++ L
Sbjct: 457 A----KAALDSMIENDHL-PDSSLFRSVMESL 483
>gi|255660862|gb|ACU25600.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 484
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 95/432 (21%), Positives = 188/432 (43%), Gaps = 32/432 (7%)
Query: 79 LRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAETYFNSLN------ 131
L S K +HALQ W+ L + H ++++G+ L A +
Sbjct: 19 LHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEW 78
Query: 132 DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
DED ++ +++ Y +EG+V ES+ + QKM+E+G + +YN + + G++
Sbjct: 79 DED----MWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMA 134
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
M G+ P ++ + I + ++ + ++M+S+ IS D TY+T+ N
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR-EISPDVVTYNTMIN 193
Query: 252 -YYIIAGLKEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
YY + ++E +++ K +I + Y LI Y S+ D+ ++ K
Sbjct: 194 GYYRVKKMEEAEKYFVEMKGRNI---EPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFG 250
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYC--YDFRVPNIILLGYSQKGMIEK 367
K Y T+L L ++ EA +L+E + Y D + ++ + + G ++
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARVILKEM-MDKYLAPTDNSIIMRLISSHCKSGNLDA 309
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPK---- 423
A VLK +++ + ++ + +KA + + + + E++ RP+
Sbjct: 310 AADVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKAVKLLDKLI---EKDIILRPQSTLH 366
Query: 424 --PSLVSSILDWLGDNRDVEEVEAFVSSL-KIKVQKRNMYHALTEAHIRSGQEVDG--LL 478
PS +S++++L +N + E V L K+ VQ + L H + G LL
Sbjct: 367 LEPSAYNSMIEYLCNNGQASKAETLVRQLMKLGVQDPTALNTLIRGHSQEGSPDSAFELL 426
Query: 479 ESMKADDIDEDK 490
+ M +D +K
Sbjct: 427 KIMLRRKVDSEK 438
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 142/330 (43%), Gaps = 54/330 (16%)
Query: 116 KVRGLESAETYFNSL---NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
+V+ +E AE YF + N E V Y L+ YV VD++L L+++MK G +A
Sbjct: 197 RVKKMEEAEKYFVEMKGRNIEPTV-VTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNA 255
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP-DNFSYRICINSYGARSELSSMENVLQ 231
+ Y+ ++ N + + +L +M + + P DN I+S+ L + +VL+
Sbjct: 256 ITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIIMRLISSHCKSGNLDAAADVLK 315
Query: 232 EMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC--EDIVSKSKDAL-----GYNH 284
M S + + G Y + + AG +KA+ L K +DI+ + + L YN
Sbjct: 316 AMIRLS-VPTEAGHYGLLIENFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNS 374
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSC 344
+I + + G Q K + T++ L+K+G
Sbjct: 375 MIEYLCNNG-----------QASKAE--------TLVRQLMKLG---------------- 399
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
D N ++ G+SQ+G + A +LK ++++ ++++++ Y KN A
Sbjct: 400 -VQDPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNLLVQSYLKKNEPXDA- 457
Query: 405 ECMKEALAVHEENKFWRPKPSLVSSILDWL 434
K AL EN P +L S+++ L
Sbjct: 458 ---KAALDSMIENDHL-PDSALFRSVMESL 483
>gi|255660950|gb|ACU25644.1| pentatricopeptide repeat-containing protein [Casselia glaziovii]
Length = 481
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 101/436 (23%), Positives = 184/436 (42%), Gaps = 40/436 (9%)
Query: 79 LRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLI---GKVRGLESAETYFNSLN---- 131
L K+ +HALQ W+ L F HD L +I G+ L A +
Sbjct: 19 LHGAKKTEHALQFFRWVERSNL-FQ-HDRETHLKIIEILGRASKLNHARCILLDMPKKGL 76
Query: 132 --DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHE 189
DED L+ +++ Y ++G+V ES+ L QKM+E+G + +Y+ + + G+
Sbjct: 77 EWDED----LWVLMIDSYGKKGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRFM 132
Query: 190 KIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTV 249
M G+ P ++ + I + ++ + ++M+S+ I+ D TY+T+
Sbjct: 133 MAKRYFNKMLNEGIEPTRHTFNVMIWGFFLSGKVETANXFFEDMKSRD-ITPDVITYNTL 191
Query: 250 AN-YYIIAGLKEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKI 307
N YY + ++E +++ K +I + Y LI Y S+ D+ + K
Sbjct: 192 INGYYRVKKMEEAERYFVEMKGRNI---EPTVITYTTLIKGYVSVDRVDDALSLMEEMKG 248
Query: 308 KCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL----GYSQKG 363
K Y T+L L ++ EA+ +L+E Y N I L G + G
Sbjct: 249 FGIKPNAITYSTLLPGLCNAEKMSEAQSILKEM---VDKYIAPTDNSIFLKLISGQCKAG 305
Query: 364 MIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPK 423
++ A VLK +++ + ++ Y +KA + + + E++ RP+
Sbjct: 306 NLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAEKYDKAVNLLDKLI---EKDIILRPQ 362
Query: 424 ------PSLVSSILDWLGDNRDVEEVEAFVSSL-KIKVQKRNMYHALTEAHIRSGQEVDG 476
PS + ++++L DN + E V L K+ VQ+ + L H + G
Sbjct: 363 STLHMEPSAYNPMIEYLCDNGQTAKAETLVRQLMKLGVQEPTALNTLIRGHSQEGSPDSA 422
Query: 477 --LLESMKADDIDEDK 490
LL+ M +D +K
Sbjct: 423 FELLKIMLRRKVDSEK 438
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 140/328 (42%), Gaps = 54/328 (16%)
Query: 116 KVRGLESAETYFNSL---NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
+V+ +E AE YF + N E V Y L+ YV VD++LSLM++MK G +A
Sbjct: 197 RVKKMEEAERYFVEMKGRNIEPTVIT-YTTLIKGYVSVDRVDDALSLMEEMKGFGIKPNA 255
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP-DNFSYRICINSYGARSELSSMENVLQ 231
+ Y+ ++ N + + +L +M + + P DN + I+ L + +VL+
Sbjct: 256 ITYSTLLPGLCNAEKMSEAQSILKEMVDKYIAPTDNSIFLKLISGQCKAGNLDAAADVLK 315
Query: 232 EMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC--EDIVSKSKDAL-----GYNH 284
M S + + G Y + Y A +KA+ L K +DI+ + + L YN
Sbjct: 316 AMIRLS-VPTEAGHYGVLIENYCKAEKYDKAVNLLDKLIEKDIILRPQSTLHMEPSAYNP 374
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSC 344
+I + G Q K + T++ L+K+G ++E +
Sbjct: 375 MIEYLCDNG-----------QTAKAE--------TLVRQLMKLG-VQEPTAL-------- 406
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
N ++ G+SQ+G + A +LK ++++ +++ + Y KN A
Sbjct: 407 --------NTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKKNEPADA- 457
Query: 405 ECMKEALAVHEENKFWRPKPSLVSSILD 432
K AL EN P SL S+++
Sbjct: 458 ---KAALDSMIENGHL-PDSSLFRSVME 481
>gi|449446895|ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like [Cucumis sativus]
Length = 668
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 104/453 (22%), Positives = 195/453 (43%), Gaps = 55/453 (12%)
Query: 53 LTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLD 112
L P L ++ G + +L ++R R+K Q+ EWM G +V ++ +
Sbjct: 90 LAPALARY---GGLLKAQDLNVILRHFGMLSRWKDLSQLFEWMQETGKT-NVSSYSSYIK 145
Query: 113 LIGK-VRGLESAETYFNSLNDEDKVDKLY--GALLNCYVREGLVDESLSLMQKMKEMGSF 169
+G+ + L++ E Y N++ + + ++ ++LNC VR G D S+ L +MK G
Sbjct: 146 FMGRGLNPLKALEVY-NNIEEVSIKNSIFICNSILNCLVRNGKFDTSVKLFHQMKNDGLC 204
Query: 170 GSALNYNGIM--CLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSME 227
+ Y+ ++ C+ G + K ++L ++++NG+ D SY I + + L E
Sbjct: 205 PDTVTYSTMLTGCIRVKHG-YAKAMELLKELQDNGLCMDCVSYGTLIAICASHNRLEDAE 263
Query: 228 NVLQEMESQSH---------------ISMDWG-------------------TYSTVANYY 253
+M ++ H I+ D+ +T+ Y
Sbjct: 264 RFFNQMRAEGHSPNMFHYGSLLNAYSINGDYKKADELIEDMKLTGLVPNKVILTTLLKVY 323
Query: 254 IIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQL 313
+ GL EK+ L + E + ++ + Y L+ A G+ E + K K K
Sbjct: 324 VRGGLFEKSRKLLSELESL-GYGENEMPYCLLMDGLAKAGSIREAKTVFDEMKAKNVKTD 382
Query: 314 NRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
+ M+ + + G LEEA+ + +++E + YD + N +L Y + G +E +L+
Sbjct: 383 GYAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVILNTMLCAYCRAGEMESVMQMLR 442
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAF-ECMKEALAVHEENKFWRPKPSLVSSILD 432
++ +P N++ I+ + EK + C + +H K +P+ L SS++
Sbjct: 443 KMDDLAISPDYNTFHILIKYFFK----EKLYLLCYRTLEDMHR--KGHQPEEELCSSLIL 496
Query: 433 WLGDNRDVEEVEAFVSSLKIKVQKRNMYHALTE 465
LG+ R EAF +K KR M AL E
Sbjct: 497 SLGNIRAYS--EAFSVYNILKYSKRTMCKALHE 527
>gi|224126121|ref|XP_002329666.1| predicted protein [Populus trichocarpa]
gi|222870547|gb|EEF07678.1| predicted protein [Populus trichocarpa]
Length = 821
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 143/309 (46%), Gaps = 16/309 (5%)
Query: 95 MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGL 152
M +GL F + + G+ L+ A+ +F L + Y ALL + + G+
Sbjct: 271 MRSKGLGFDEFTCSTVISACGREGLLDEAKEFFVGLKSQGYAPGTVTYNALLQVFGKAGI 330
Query: 153 VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
E+LS+M++M++ A+ YN ++ Y G +E+ ++ M ENG+ P+ +Y
Sbjct: 331 YSEALSIMKEMEDNNCPPDAVTYNELVAAYVRAGFYEEGAALIDTMTENGIKPNAVTYTT 390
Query: 213 CINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDI 272
IN+YG +++ ++ +M+ G V Y I G+ K + + +
Sbjct: 391 MINAYGRAAQVDKALSLYDQMKES-------GCAPNVCTYNAILGMLGKKSQSEEMMKIL 443
Query: 273 VSKSKDALGYNHLI--SHYASLGNKDEMMKFWG--LQKIK-CKKQLNRD-YITMLGSLVK 326
D N + + + GNK M K+ Q++K C + +RD + T++ + +
Sbjct: 444 CDMKVDGCAPNRITWNTMLSMCGNKG-MHKYVKRVFQEMKSCGFEPDRDTFNTLITASGR 502
Query: 327 IGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNS 386
G +AEK+ +E + + N +L +++G A++V+K++ KG P+ S
Sbjct: 503 CGSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAESVIKDMKNKGFKPSETS 562
Query: 387 WSIIAAGYA 395
+S+I YA
Sbjct: 563 YSLILNSYA 571
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 159/350 (45%), Gaps = 12/350 (3%)
Query: 69 ELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFN 128
+++L V++ L + A+ + EW+ +V+ ++L+ ++ G ES + +
Sbjct: 135 QVDLIGVLKALDLSGDCERAILLFEWLVLNLGTGNVNLDNQAVELMARILGRESQHSIAS 194
Query: 129 SLNDEDKVD------KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLY 182
L D +D + Y +L+ Y R G + ++++ +KM E G + + YN ++ +Y
Sbjct: 195 KLFDVIPLDDYSLDVRAYTTILHSYSRCGKYERAVAIFEKMNESGLSPTLVTYNVMLDVY 254
Query: 183 TNTGQH-EKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISM 241
G+ KI +L +M+ G+ D F+ I++ G L + ++SQ + +
Sbjct: 255 GKMGRSWNKILGLLDEMRSKGLGFDEFTCSTVISACGREGLLDEAKEFFVGLKSQGY-AP 313
Query: 242 DWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKF 301
TY+ + + AG+ +A+ +K+ ED + DA+ YN L++ Y G +E
Sbjct: 314 GTVTYNALLQVFGKAGIYSEALSIMKEMED-NNCPPDAVTYNELVAAYVRAGFYEEGAAL 372
Query: 302 WGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQ 361
K Y TM+ + + ++++A + ++ + S + N IL +
Sbjct: 373 IDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAILGMLGK 432
Query: 362 KGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKN---NMEKAFECMK 408
K E+ +L ++ G P +W+ + + +K +++ F+ MK
Sbjct: 433 KSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEMK 482
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 115/275 (41%), Gaps = 20/275 (7%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ALLN R G + S+++ MK G S +Y+ I+ Y G + I + D+
Sbjct: 528 YNALLNALARRGDWRTAESVIKDMKNKGFKPSETSYSLILNSYAKGGYVKGINRIEKDIY 587
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ + P R I + L+ ME Q ++ + D ++++ + + +
Sbjct: 588 DGHIFPSWMLLRTLILANFKCRALAGMERAFQALQKHGY-KPDLVVFNSMLSMFSRKNMH 646
Query: 260 EKA--IIYL-KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
++A I++L ++C D + YN L+ YA G + W ++I + Q + D
Sbjct: 647 DRAHEIMHLIQEC----GLQPDLVTYNSLMDLYARGG------ECWKAEEILRELQNSGD 696
Query: 317 ------YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADA 370
Y T++ + G + EA + L E N + GY+ KGM + D
Sbjct: 697 KSDLISYNTVIKGFCRQGLMHEALRTLSEMISRGIRPCIVTYNTFVGGYAAKGMFAEIDE 756
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
VL + K P ++ I+ GY ++A +
Sbjct: 757 VLSYMTKHDCRPNELTYKIVVDGYCKAKKFKEAMD 791
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 63/145 (43%), Gaps = 3/145 (2%)
Query: 116 KVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
K R L E F +L L + ++L+ + R+ + D + +M ++E G +
Sbjct: 607 KCRALAGMERAFQALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLV 666
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
YN +M LY G+ K ++L +++ +G D SY I + + + L EM
Sbjct: 667 TYNSLMDLYARGGECWKAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEM 726
Query: 234 ESQSHISMDWGTYSTVANYYIIAGL 258
S+ I TY+T Y G+
Sbjct: 727 ISRG-IRPCIVTYNTFVGGYAAKGM 750
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 131 NDEDKVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHE 189
N DK D + Y ++ + R+GL+ E+L + +M G + YN + Y G
Sbjct: 693 NSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEMISRGIRPCIVTYNTFVGGYAAKGMFA 752
Query: 190 KIPDVLLDMKENGVPPDNFSYRICINSY 217
+I +VL M ++ P+ +Y+I ++ Y
Sbjct: 753 EIDEVLSYMTKHDCRPNELTYKIVVDGY 780
>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
Length = 800
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 88/412 (21%), Positives = 183/412 (44%), Gaps = 24/412 (5%)
Query: 71 ELQRVIRQLRSRKRFKHALQVSEWMSGQGL--AFSVHDHAVQLDLIGKVRGLESAETYFN 128
E VI+ L + K +K A+ + + M+ G+ AF+ + + + + + R + A +
Sbjct: 354 EFNMVIKGLLNDKLWKDAVSLFKEMADSGIPDAFT---YNILIHWLCQRRKIREALNLWE 410
Query: 129 SLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTG 186
+N+ + Y +LL CY G +DE++ L +M G + + Y +M + N
Sbjct: 411 KMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKA 470
Query: 187 QHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTY 246
+K +L +MK+NGV ++++Y IN + + +L+ E++ + TY
Sbjct: 471 AFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAM-TY 529
Query: 247 STVANYYIIAGLKEKAI-IYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQ 305
+++ N +I AG+ A +Y + C + + + Y I Y D +K L
Sbjct: 530 NSIINGFIKAGMMGSAFAVYQQMCAKGI--PPNIVTYTSFIDGYCKTSCCDLALKM--LN 585
Query: 306 KIKCKKQLNRD---YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQK 362
++CK L D Y +++ + G + A ++L + V N + GY
Sbjct: 586 DVRCKG-LRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNL 644
Query: 363 GMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRP 422
M+E+A ++++K+G +++ + G++ N+ A + E +A K P
Sbjct: 645 KMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVA-----KGNIP 699
Query: 423 KPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRN--MYHALTEAHIRSGQ 472
+++ L N D+++ + + + N MY+ L ++R+G+
Sbjct: 700 DHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGK 751
>gi|168004269|ref|XP_001754834.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693938|gb|EDQ80288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 504
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 126/310 (40%), Gaps = 39/310 (12%)
Query: 95 MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYG--ALLNCYVREGL 152
M QG+ +V+ + +++ GK + A+ F S+ LY AL+N + REG
Sbjct: 188 MQKQGILPAVNTFTIMINIYGKAYYSDKADDLFRSMRKALCPPNLYTYTALMNAHAREGN 247
Query: 153 VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
+ + +++ +G YN ++ Y+ +V M E GV PD SY I
Sbjct: 248 CVRAEEIFAELQSVGFIPDVYTYNALLEAYSRGEHPTGAKEVFQAMVEAGVRPDQVSYNI 307
Query: 213 CINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDI 272
I+++G R+ L++ + + ++ ++ + + Y AG +A +++ E+
Sbjct: 308 LIDAFG-RAGLTADAQAVYDSMKEAGFKPTMKSHMLLLSSYAKAGKVTEAERLVREIENS 366
Query: 273 VSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEE 332
K D +N L+S Y + G DEM
Sbjct: 367 GVKP-DTFMFNSLLSAYGNSGRIDEM---------------------------------- 391
Query: 333 AEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAA 392
E +LE S D N ++ Y+Q G IEKA+ V + KG TP SW+ +
Sbjct: 392 -ESLLESMVSSVAKPDISTLNTLINAYAQGGYIEKAEEVFNSLESKGLTPDVMSWTSLMG 450
Query: 393 GYADKNNMEK 402
YA + K
Sbjct: 451 AYAQRKLFRK 460
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 86/425 (20%), Positives = 169/425 (39%), Gaps = 63/425 (14%)
Query: 76 IRQLRSRKRFKHALQVSEWMSGQGLAF--SVHDHAVQLDLIGKVRGLESAETYFNSLNDE 133
+ +LR + ++ + + EW+ QG F V + +D GK + AE F+ + D
Sbjct: 54 VAELRRLRNWRSVILILEWIL-QGTMFKPDVGCFNMLIDAYGKSKQWREAEKTFHLMKDF 112
Query: 134 D--KVDKLYGALLNCYVREGLVDESLSLMQKMKEMGS---------FGSALNYNGIMCLY 182
+ + LL Y R ++++ L +MKE F YN + +
Sbjct: 113 QCLPTETSFNVLLAAYSRGVQLEKAEKLFHEMKESNYSPGTVEWMIFSGIATYNTYLEVL 172
Query: 183 TNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMD 242
+G+ + D DM++ G+ P ++ I IN YG +++ + M ++ +
Sbjct: 173 GKSGRLSQAEDTFRDMQKQGILPAVNTFTIMINIYGKAYYSDKADDLFRSMR-KALCPPN 231
Query: 243 WGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFW 302
TY+ + N + G +A + + V D YN L+ Y+
Sbjct: 232 LYTYTALMNAHAREGNCVRAEEIFAELQS-VGFIPDVYTYNALLEAYSR----------- 279
Query: 303 GLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQK 362
G K+ M+ + V+ ++ NI++ + +
Sbjct: 280 GEHPTGAKEVFQ----AMVEAGVRPDQVSY--------------------NILIDAFGRA 315
Query: 363 GMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRP 422
G+ A AV + + G PT S ++ + YA + +A ++E EN +P
Sbjct: 316 GLTADAQAVYDSMKEAGFKPTMKSHMLLLSSYAKAGKVTEAERLVREI-----ENSGVKP 370
Query: 423 KPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNM--YHALTEAHIRSG-----QEVD 475
+ +S+L G++ ++E+E+ + S+ V K ++ + L A+ + G +EV
Sbjct: 371 DTFMFNSLLSAYGNSGRIDEMESLLESMVSSVAKPDISTLNTLINAYAQGGYIEKAEEVF 430
Query: 476 GLLES 480
LES
Sbjct: 431 NSLES 435
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 132/322 (40%), Gaps = 24/322 (7%)
Query: 175 YNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEME 234
+N ++ Y + Q + MK+ P S+ + + +Y +L E + EM+
Sbjct: 86 FNMLIDAYGKSKQWREAEKTFHLMKDFQCLPTETSFNVLLAAYSRGVQLEKAEKLFHEMK 145
Query: 235 SQSHI--SMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK-SKDAL-----GYNHLI 286
++ +++W +S +A Y + K+ L + ED K + + +I
Sbjct: 146 ESNYSPGTVEWMIFSGIATYNTYLEVLGKS-GRLSQAEDTFRDMQKQGILPAVNTFTIMI 204
Query: 287 SHYASLGNKDEMMK-FWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCY 345
+ Y D+ F ++K C L Y ++ + + G AE++ E + +
Sbjct: 205 NIYGKAYYSDKADDLFRSMRKALCPPNL-YTYTALMNAHAREGNCVRAEEIFAELQSVGF 263
Query: 346 CYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
D N +L YS+ A V + +V+ G P S++I+ +
Sbjct: 264 IPDVYTYNALLEAYSRGEHPTGAKEVFQAMVEAGVRPDQVSYNILIDAFGRAG------- 316
Query: 406 CMKEALAVHEENKFWRPKPSLVSS--ILDWLGDNRDVEEVEAFVSSLKIKVQKRN--MYH 461
+A AV++ K KP++ S +L V E E V ++ K + M++
Sbjct: 317 LTADAQAVYDSMKEAGFKPTMKSHMLLLSSYAKAGKVTEAERLVREIENSGVKPDTFMFN 376
Query: 462 ALTEAHIRSGQ--EVDGLLESM 481
+L A+ SG+ E++ LLESM
Sbjct: 377 SLLSAYGNSGRIDEMESLLESM 398
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 2/148 (1%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSL-NDEDKVDK-LYGALLN 145
A V + M G ++ H + L K + AE + N K D ++ +LL+
Sbjct: 321 AQAVYDSMKEAGFKPTMKSHMLLLSSYAKAGKVTEAERLVREIENSGVKPDTFMFNSLLS 380
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
Y G +DE SL++ M + N ++ Y G EK +V ++ G+ P
Sbjct: 381 AYGNSGRIDEMESLLESMVSSVAKPDISTLNTLINAYAQGGYIEKAEEVFNSLESKGLTP 440
Query: 206 DNFSYRICINSYGARSELSSMENVLQEM 233
D S+ + +Y R ++ Q+M
Sbjct: 441 DVMSWTSLMGAYAQRKLFRKCVSIFQKM 468
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/402 (20%), Positives = 169/402 (42%), Gaps = 48/402 (11%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLN 145
A ++ + +S G+ +V+ + ++ + K +E T+ + + ++ + Y L++
Sbjct: 209 AWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLIS 268
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
Y +GL++E+ LM M G YN ++ G++E+ +V +M +G+ P
Sbjct: 269 AYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSP 328
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
D+ +YR + + + EN+ +M S+ + D +S++ + + +G +KA++Y
Sbjct: 329 DSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVP-DLVCFSSMMSLFTRSGNLDKALMY 387
Query: 266 LKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWG--LQKIKCKKQLNRDYITMLGS 323
++ D + Y LI Y G E M LQ+ C + Y T+L
Sbjct: 388 FNSVKE-AGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQ-GCAMDV-VTYNTILHG 444
Query: 324 LVKIGELEEAEKMLEEWE--------------LSCYC---------------------YD 348
L K L EA+K+ E + +C D
Sbjct: 445 LCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLD 504
Query: 349 FRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMK 408
N +L G+ + G I+ A + ++V K PTP S+SI+ K ++ +AF
Sbjct: 505 VVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWD 564
Query: 409 EALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL 450
E ++ K +P + +S++ + + + E F+ +
Sbjct: 565 EMIS-----KSIKPTVMICNSMIKGYCRSGNASDGEIFLEKM 601
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 156/345 (45%), Gaps = 51/345 (14%)
Query: 111 LDLIGKVRGLESAETYFNSLNDEDKV--DKLYGALLNCYVREGLVDESLSLMQKMKEMGS 168
+ L + L+ A YFNS+ + + + +Y L+ Y R+G++ E+++L +M + G
Sbjct: 372 MSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGC 431
Query: 169 FGSALNYNGIM---CLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSS 225
+ YN I+ C G+ +K+ + +M E G+ PD+++ I I+ + L +
Sbjct: 432 AMDVVTYNTILHGLCKRKMLGEADKLFN---EMTERGLFPDSYTLTILIDGHCKLGNLQN 488
Query: 226 MENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS--KDALGYN 283
+ ++M+ + I +D TY+T+ + + G + A + D+VSK + ++
Sbjct: 489 AMELFKKMK-EKRIKLDVVTYNTLLDGFGKVGDIDTA---KEIWADMVSKEILPTPISFS 544
Query: 284 HLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEE---- 339
L++ S G+ E + W K K +M+ + G + E LE+
Sbjct: 545 ILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISE 604
Query: 340 -WELSCYCYDFR---------------------------VPNI-----ILLGYSQKGMIE 366
+ C Y+ VP++ IL G+ ++ ++
Sbjct: 605 GFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMK 664
Query: 367 KADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
+A+AVL++++++G P ++++ + G+ ++N+ +AF E L
Sbjct: 665 EAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEML 709
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 139/336 (41%), Gaps = 44/336 (13%)
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
AL+ VR G V+ + + Q++ G + N ++ G+ EK+ L +++E
Sbjct: 195 ALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEK 254
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
GV PD +Y I++Y ++ + ++ M S+ S TY+TV N G E+
Sbjct: 255 GVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKG-FSPGVYTYNTVINGLCKHGKYER 313
Query: 262 A--------------------IIYLKKC--------EDIVSKSK------DALGYNHLIS 287
A + ++ C E+I S + D + ++ ++S
Sbjct: 314 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMS 373
Query: 288 HYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCY 347
+ GN D+ + ++ K N Y ++ + G + EA + E
Sbjct: 374 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAM 433
Query: 348 DFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECM 407
D N IL G ++ M+ +AD + E+ ++G P + +I+ G+ N++ A E
Sbjct: 434 DVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELF 493
Query: 408 KEALAVHEENKFWRPKPSLVS--SILDWLGDNRDVE 441
K+ K R K +V+ ++LD G D++
Sbjct: 494 KKM-------KEKRIKLDVVTYNTLLDGFGKVGDID 522
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 80/174 (45%), Gaps = 9/174 (5%)
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
++GSLV+IG +E A ++ +E S + NI++ + G +EK L E+ +KG
Sbjct: 196 LIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKG 255
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRD 439
P +++ + + Y+ + ME+AFE M +K + P +++++ L +
Sbjct: 256 VYPDIVTYNTLISAYSSQGLMEEAFELMHAM-----PSKGFSPGVYTYNTVINGLCKHGK 310
Query: 440 VEEV-EAFVSSLKIKVQK-RNMYHALTEAHIRSGQ--EVDGLLESMKADDIDED 489
E E F L+ + Y +L + G E + + M++ D+ D
Sbjct: 311 YERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPD 364
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 122/289 (42%), Gaps = 22/289 (7%)
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL----- 196
A+++ VR G + ++ S + +M N ++ Y+N G ++ + D+L+
Sbjct: 108 AMIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVFDLLIRTFVQ 167
Query: 197 -----DMKENGVPPDNFSYRICINS----YGARSELSSME---NVLQEMESQSHISMDWG 244
+ E + Y + I++ G+ + +E + QE+ S+S + ++
Sbjct: 168 ARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEI-SRSGVGVNVY 226
Query: 245 TYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGL 304
T + + N G EK +L + ++ D + YN LIS Y+S G +E +
Sbjct: 227 TLNIMVNALCKDGKMEKVGTFLSEVQE-KGVYPDIVTYNTLISAYSSQGLMEEAFELMHA 285
Query: 305 QKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGM 364
K Y T++ L K G+ E A+++ E S D +L+ +KG
Sbjct: 286 MPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGD 345
Query: 365 IEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA---FECMKEA 410
+ + + ++ + P +S + + + N++KA F +KEA
Sbjct: 346 AVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA 394
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 154/344 (44%), Gaps = 16/344 (4%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQG-LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE 133
VI SR R + AL + M +G +A + + + + KV ++ A F+ + +
Sbjct: 151 VIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTK 210
Query: 134 DKVDK---LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEK 190
+V +Y AL+ Y +G +D +L +M E G + YN ++ G+ +
Sbjct: 211 GEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTE 270
Query: 191 IPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVA 250
+++ +M G+ PD F+Y I IN + + + + M + G +TV
Sbjct: 271 AYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRR-------GVRATVV 323
Query: 251 NYY-IIAGLKEKAIIYL--KKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQ 305
Y +I L +K + K ++ V + D + YN LI+ +++ GN D + G
Sbjct: 324 TYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 383
Query: 306 KIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMI 365
+ K + Y T++ L +G ++EA K+++E D N ++ GYS KG +
Sbjct: 384 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDV 443
Query: 366 EKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
+ A + E++ KG PT +++ + G + A +KE
Sbjct: 444 KDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKE 487
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 114/286 (39%), Gaps = 41/286 (14%)
Query: 58 DQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKV 117
D+ V G ++ ++ L R A ++ E M G+GLA V
Sbjct: 241 DRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT----------- 289
Query: 118 RGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNG 177
Y L+N + +EG V ++L + + M G + + Y
Sbjct: 290 ----------------------YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTA 327
Query: 178 IMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS 237
++ + GQ ++ + + G+ PD Y INS+ + ++ EME +
Sbjct: 328 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME-KK 386
Query: 238 HISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK---SKDALGYNHLISHYASLGN 294
I+ D TY+T+ + G ++A +K D +++ D + YN LIS Y+ G+
Sbjct: 387 RIAPDDVTYNTLMRGLCLLGRVDEA----RKLIDEMTERGIQPDLVTYNTLISGYSMKGD 442
Query: 295 KDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEW 340
+ ++ K Y ++ L K G+ ++AE M++E
Sbjct: 443 VKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEM 488
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 99/210 (47%), Gaps = 6/210 (2%)
Query: 205 PDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAII 264
P+ +Y I + +R + + ++++EM + I+ + TY TV + + G ++A+
Sbjct: 143 PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV- 201
Query: 265 YLKKCEDIVSKSK---DALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITML 321
K +++++K + +A+ YN LI Y G D + + + Y ++
Sbjct: 202 --KVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLV 259
Query: 322 GSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKT 381
+L G EA +++EE D NI++ G+ ++G ++KA + + + ++G
Sbjct: 260 HALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVR 319
Query: 382 PTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
T +++ + + K +++ + EA+
Sbjct: 320 ATVVTYTALIYALSKKGQVQETDKLFDEAV 349
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 114/259 (44%), Gaps = 14/259 (5%)
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKE-NGVPPDNFSYRICI 214
+L L+++M +A+ YN ++ + + G+ + D++ +M+E G+ P+ ++Y I
Sbjct: 133 ALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVI 188
Query: 215 NSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKK-CEDIV 273
+ + + V EM ++ + + Y+ + Y G + A++Y + E V
Sbjct: 189 SGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGV 248
Query: 274 SKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT---MLGSLVKIGEL 330
+ + YN L+ G E + L + K L D T ++ K G +
Sbjct: 249 AMT--VATYNLLVHALFMDGRGTEA---YELVEEMGGKGLAPDVFTYNILINGHCKEGNV 303
Query: 331 EEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSII 390
++A ++ E ++ S+KG +++ D + E V++G P ++ +
Sbjct: 304 KKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNAL 363
Query: 391 AAGYADKNNMEKAFECMKE 409
++ N+++AFE M E
Sbjct: 364 INSHSTSGNIDRAFEIMGE 382
Score = 38.1 bits (87), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L++ Y +G V ++L + +M G + L YN ++ GQ + +++ +M
Sbjct: 430 YNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMV 489
Query: 200 ENGVPPDNFSY 210
ENG+ PD+ +Y
Sbjct: 490 ENGITPDDSTY 500
>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
gi|194700420|gb|ACF84294.1| unknown [Zea mays]
gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
Length = 598
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 141/341 (41%), Gaps = 47/341 (13%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE- 133
+I L R R AL V + M +G A V + + L K RG A + + E
Sbjct: 169 LIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEG 228
Query: 134 -DKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+ + Y +++ REG VD++ L+ + G + +NYN ++ + + +
Sbjct: 229 CEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDAD 288
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
++L +M PP+ + + IN+ +
Sbjct: 289 EILDEMVRENCPPNEATLNVIINTLCRK-------------------------------- 316
Query: 253 YIIAGLKEKAIIYLKKCEDIVSK---SKDALGYNHLISHYASLGNKDEMMKFWG-LQKIK 308
GL +K +YL+K +SK + + + YN +IS GN D ++ +Q
Sbjct: 317 ----GLLQKVTLYLEK----MSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFG 368
Query: 309 CKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKA 368
CK + Y T+L L E+AE+++ + + D N I+ + QKG+I +A
Sbjct: 369 CKPDI-VTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQA 427
Query: 369 DAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
V K++ +KG P ++S I G ME+A E + E
Sbjct: 428 FEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNE 468
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 58/129 (44%), Gaps = 1/129 (0%)
Query: 87 HALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED-KVDKLYGALLN 145
A +V + M +G + ++ + + K +E A N + ++ DK+Y L
Sbjct: 426 QAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKMYRVLTE 485
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
+E ++E + ++ K+++ G + YN ++ G+ + DVL DM G P
Sbjct: 486 SLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMP 545
Query: 206 DNFSYRICI 214
D +Y I I
Sbjct: 546 DESTYIILI 554
>gi|449455399|ref|XP_004145440.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Cucumis sativus]
Length = 576
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 89/423 (21%), Positives = 182/423 (43%), Gaps = 51/423 (12%)
Query: 75 VIRQLRSRKRFKHALQVSEW-MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE 133
V QLR K++ + + EW M+ V + + +D G+ + E+ + L +
Sbjct: 125 VAVQLRLNKKWGPIILICEWIMNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLES 184
Query: 134 DKV--DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
+ + Y LL Y + GL++++ ++ +M++ G SA+ YN + G + K
Sbjct: 185 HCIPTEDTYALLLKAYCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNNVKA 244
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
++ MK +G P +Y + IN YG S+ +N+ EM +Q + T++ + N
Sbjct: 245 VEIFHRMKRDGCQPTTDTYTMLINVYGKESKSHMAQNIFDEMRTQ-RCKPNICTFTALVN 303
Query: 252 YYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGL-QKIKCK 310
GL EKA ++ ++ D YN L+ Y+ G + + L Q + C+
Sbjct: 304 ALAREGLCEKAEEIFEQMQE-AGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCE 362
Query: 311 KQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADA 370
D NI++ Y + G+ E A A
Sbjct: 363 P------------------------------------DRASYNIMVDAYGRAGLHEDAQA 386
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSI 430
V +E+ + G TPT S ++ + Y+ N+ K + + + +H+ +P +++S+
Sbjct: 387 VFEEMKRIGITPTMKSHMLLLSAYSSAGNVAKCEDIIGQ---MHKSG--LKPDTFVMNSM 441
Query: 431 LDWLGDNRDVEEVEAFVSSLKIKVQKRNM--YHALTEAHIRSG--QEVDGLLESMKADDI 486
L+ G ++E S+++ + ++ Y+ L + R+G + ++ L + + A ++
Sbjct: 442 LNLYGRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGFVERMEELFQLLPAKNL 501
Query: 487 DED 489
+ D
Sbjct: 502 EPD 504
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/334 (19%), Positives = 127/334 (38%), Gaps = 67/334 (20%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLN 145
A+++ M G + + + +++ GK A+ F+ + + + + AL+N
Sbjct: 244 AVEIFHRMKRDGCQPTTDTYTMLINVYGKESKSHMAQNIFDEMRTQRCKPNICTFTALVN 303
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
REGL +++ + ++M+E G YN +M Y+ G ++ M+ G P
Sbjct: 304 ALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEP 363
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMES-------QSHISMDWGTYSTVANYYIIAGL 258
D SY I +++YG + V +EM+ +SH+ + YS+ N
Sbjct: 364 DRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLL-LSAYSSAGN------- 415
Query: 259 KEKAIIYLKKCEDIVSK------SKDALGYNHLISHYASLGNKDEMMK-FWGLQKIKCKK 311
+ KCEDI+ + D N +++ Y LG +M F +QK C+
Sbjct: 416 -------VAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQKGPCRA 468
Query: 312 QLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAV 371
D NI++ Y + G +E+ + +
Sbjct: 469 ------------------------------------DISTYNILINVYGRAGFVERMEEL 492
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
+ + K P +W+ Y+ K ++ E
Sbjct: 493 FQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLE 526
Score = 41.6 bits (96), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 85/205 (41%), Gaps = 11/205 (5%)
Query: 81 SRKRFKH-ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLN--DEDKVD 137
SR F + A ++ M G + + +D G+ E A+ F +
Sbjct: 341 SRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTM 400
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
K + LL+ Y G V + ++ +M + G N ++ LY GQ K+ D+
Sbjct: 401 KSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFST 460
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
M++ D +Y I IN YG + ME + Q + ++ ++ D T+++ Y
Sbjct: 461 MQKGPCRADISTYNILINVYGRAGFVERMEELFQLLPAK-NLEPDVVTWTSRIGAY---- 515
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGY 282
+ +Y K+C ++ K DA Y
Sbjct: 516 --SRKKLY-KRCLELFEKMIDAGCY 537
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 148/339 (43%), Gaps = 27/339 (7%)
Query: 120 LESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNG 177
+E A FN +D L Y +L+ R+GL+ +L +M +M E G YN
Sbjct: 366 IERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNI 425
Query: 178 IMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS 237
I+ G V+ D G PD F++ I+ Y R +L S +++ M +
Sbjct: 426 IINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYG 485
Query: 238 HISMDWGTYSTVANYYIIAGLKEKAI------IYLKKCEDIVSKSKDALGYNHLISHYAS 291
I+ D TY++V N AG K K + + LK C +A+ YN LI ++
Sbjct: 486 -IAPDVITYNSVLNGLCKAG-KAKEVNETFEEMILKGCR------PNAITYNILIENFCK 537
Query: 292 LGNKDEMMKFWGLQKIKCKKQLNRDYI---TMLGSLVKIGELEEAEKMLEEWELSCYCYD 348
+ +E G+ C+ L D + T++ + G+L+ A + ++ + Y
Sbjct: 538 INQLEEA---SGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSAT 594
Query: 349 FRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMK 408
NI++ YS K ++ A+ + E++ KG P ++ I+ G N+++A+ +
Sbjct: 595 ADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLA 654
Query: 409 EALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFV 447
E + +K + P + +L+ L N V E A +
Sbjct: 655 EMI-----SKGFVPSMATFGRMLNLLAMNHRVSEAVAII 688
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 75/365 (20%), Positives = 150/365 (41%), Gaps = 22/365 (6%)
Query: 115 GKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALN 174
G++ +++A S D + LY A + Y R G + ++ ++M +A
Sbjct: 49 GRLDDVDAALASARSHLAPDSLQPLYVASIQAYARAGRLRAAVDAFERMDLFACPPAAPA 108
Query: 175 YNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEME 234
YN IM N H++ V + M GV PD ++ + + S+ +L+ +
Sbjct: 109 YNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSL- 167
Query: 235 SQSHISMDWGTYSTVAN--YYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASL 292
S+ Y TV Y G + + D+ D +N+++ +L
Sbjct: 168 SERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFP---DVATFNNVLH---AL 221
Query: 293 GNKDEMMKFWGLQKIKCKKQLNRDYITM---LGSLVKIGELEEAEKMLEEWELSCYCY-D 348
K ++M+ L K+ ++ + T + L + G LEEA ++E + Y D
Sbjct: 222 CQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVE--RMGAYVAPD 279
Query: 349 FRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMK 408
N ++ G + +++A L ++ +G P +++ I GY +++A E +K
Sbjct: 280 VVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLK 339
Query: 409 EALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNM--YHALTEA 466
+A+ K + P S+++ L D+E + + K K ++ Y++L +
Sbjct: 340 DAVF-----KGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKG 394
Query: 467 HIRSG 471
R G
Sbjct: 395 LCRQG 399
>gi|224058965|ref|XP_002299667.1| predicted protein [Populus trichocarpa]
gi|222846925|gb|EEE84472.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 175/433 (40%), Gaps = 48/433 (11%)
Query: 71 ELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSL 130
+L ++R + R++ Q+ +WM + + + + ++ E Y +S+
Sbjct: 6 DLNIILRNFGEQCRWQDLSQLFDWMQRHNKISASSYSSYIKFMGTSLNPAKALEIY-HSI 64
Query: 131 NDEDKVDKLY--GALLNCYVREGLVDESLSLMQKMKEMGSFGSA---------------- 172
DE ++ +LL C VR D S+ KMK G A
Sbjct: 65 PDESTKTNVFICNSLLRCLVRNTKFDSSMKFFHKMKNNGLTPDAITYSTLLAGCMKIKDG 124
Query: 173 ----------LNYNGI----------MCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
LNYNG+ + + + + E+ MK+ G P+ F Y
Sbjct: 125 YSKALDLVQELNYNGLQMDSIMYGTLLAVCASNNRCEEAQSYFNQMKDEGHSPNIFHYSS 184
Query: 213 CINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDI 272
+N+Y + E ++Q+M+S S + + +T+ Y+ GL EK+ L + D
Sbjct: 185 LLNAYSSDGNYKKAEELVQDMKS-SGLVPNKVILTTLLKVYVRGGLFEKSRDLLVEL-DT 242
Query: 273 VSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEE 332
+ +K+ + Y L+ A G DE + K K K Y M+ S + G EE
Sbjct: 243 LGFAKNEMPYCLLMDGLAKNGLLDEARSVFNEMKEKRVKSGGYSYSIMISSFCRGGLFEE 302
Query: 333 AEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAA 392
A+++ EE+E YD + N IL Y + G E ++++ + +P N++ I+
Sbjct: 303 AKELAEEFEAKYDKYDVVILNTILCAYCRTGEKESVMRTMRKMDELAISPDYNTFHILIK 362
Query: 393 GYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKI 452
+ + A++ M++ K +P L SS++ LG + EAF +
Sbjct: 363 YFCKEKLYMLAYQTMEDM-----HRKGHQPMEELCSSLILHLGKIK--AHAEAFSVYSML 415
Query: 453 KVQKRNMYHALTE 465
K KR M A E
Sbjct: 416 KSSKRTMSKAFHE 428
>gi|224093190|ref|XP_002309826.1| predicted protein [Populus trichocarpa]
gi|222852729|gb|EEE90276.1| predicted protein [Populus trichocarpa]
Length = 1480
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 173/386 (44%), Gaps = 33/386 (8%)
Query: 42 RISPLGDPDVSLTPVLDQWV---LEGQKI--SELELQRVIRQLRSRKRFKHALQVSEWMS 96
R+ L D + LT DQ+V L+ +K+ + +L V++ + ++ + AL+V EW++
Sbjct: 155 RVKYLTDRILGLTQ--DQFVADVLDDRKVQMTPTDLCFVVKSV-GQESWHRALEVYEWLN 211
Query: 97 GQGLAFSVHDHAVQLDLIGKVRGLE-----SAETYFNSLNDEDKVDKLYGALLNCYVREG 151
L +A L I V G + E + + ++Y A++ Y R G
Sbjct: 212 ---LRHWYSPNARMLSTILSVLGKANQEALAVEVFMRAEPSAGNTVQVYNAMMGVYARRG 268
Query: 152 LVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM----KENGVPPDN 207
++ L+ M+E G +++N ++ G +P++ +++ + +G+ PD
Sbjct: 269 RFNKVQELLDLMRERGCKPDLVSFNTLINARLKAGAM--MPNLAIELLNEVRRSGLRPDT 326
Query: 208 FSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLK 267
+Y I++ S L V +ME+ H D TY+ + + Y GL KA
Sbjct: 327 ITYNTLISACSRASNLEEAAKVFDDMEAH-HCQPDLWTYNAMISVYGRCGLSGKAEQLFN 385
Query: 268 KCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWG-LQKIKCKKQLNRDYITMLGSL 324
D+ S+ DA+ YN L+ +A GN +++ + W + KI K Y TM+
Sbjct: 386 ---DLESRGFFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKD-EMTYNTMIHMY 441
Query: 325 VKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTP 384
K G+ E A ++ + + S D +++ + I +A V+ E++ G PT
Sbjct: 442 GKQGQNELALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEAAGVMSEMLNTGVKPTL 501
Query: 385 NSWSIIAAGYADKNN---MEKAFECM 407
++S + GYA E+ F+CM
Sbjct: 502 KTYSALICGYAKAGKPVEAEETFDCM 527
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 114/251 (45%), Gaps = 30/251 (11%)
Query: 123 AETYFNSLNDE----DKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGI 178
AE FN L D V Y +LL + REG V++ + ++M ++G + YN +
Sbjct: 380 AEQLFNDLESRGFFPDAVS--YNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYNTM 437
Query: 179 MCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSH 238
+ +Y GQ+E + DM+ +G PD +Y + I+S G ++++ V+ EM + +
Sbjct: 438 IHMYGKQGQNELALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEAAGVMSEMLN-TG 496
Query: 239 ISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS---KDALGYNHLISHYASLGNK 295
+ TYS + Y AG +A ++ D + +S D L Y+ ++ +
Sbjct: 497 VKPTLKTYSALICGYAKAGKPVEA----EETFDCMLRSGIRPDHLAYSVMLDIHLRFNEP 552
Query: 296 DEMMKFWGLQKIKCKKQLNRDYIT--------MLGSLVKIGELEEAEKMLEEWELSCYCY 347
M + K++ D IT ML +L K+ ++E+ +++ + E C
Sbjct: 553 KRAMTLY--------KEMLHDGITLDHSLYELMLRTLRKVNKVEDIGRVIRDMEEICGMN 604
Query: 348 DFRVPNIILLG 358
+ +I++ G
Sbjct: 605 TQTISSILVKG 615
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 119/287 (41%), Gaps = 8/287 (2%)
Query: 121 ESAETYFNSL---NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNG 177
E A FN++ VD + G LL + +G +DE ++Q++++MG S +
Sbjct: 830 ERARAIFNTMMRDGPSPTVDTING-LLQALIVDGRLDELYVVVQELQDMGFKISKSSILL 888
Query: 178 IMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS 237
++ + G ++ + MK G P YR+ ++ +E +L EME ++
Sbjct: 889 MLDAFARAGNIFEVKKIYHGMKAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLSEME-EA 947
Query: 238 HISMDWGTYSTVANYYI-IAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKD 296
D +++V Y+ I ++ +Y + ED + +D YN LI Y +
Sbjct: 948 GFKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDT--YNTLIVMYCRDHRPE 1005
Query: 297 EMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIIL 356
E ++ + Y +++ S K +E+AE++ EE + D + ++
Sbjct: 1006 EGFSLMHEMRVAGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTMM 1065
Query: 357 LGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
Y G KA+ + + G PT + ++ Y ++A
Sbjct: 1066 KIYRNSGSHSKAERLFSMMKDAGVEPTIATMHLLMVSYGSSGQPQEA 1112
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 66/126 (52%), Gaps = 4/126 (3%)
Query: 133 EDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
E K+D Y +L+ + ++ LV+++ L ++++ G Y+ +M +Y N+G H K
Sbjct: 1020 EPKLDT-YKSLVASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTMMKIYRNSGSHSKAE 1078
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM-ESQSHISMDWGTYSTVAN 251
+ MK+ GV P + + + SYG+ + E VL + E+ S++S YS+V +
Sbjct: 1079 RLFSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETGSNLST--LPYSSVID 1136
Query: 252 YYIIAG 257
Y+ G
Sbjct: 1137 AYLRNG 1142
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 94/214 (43%), Gaps = 16/214 (7%)
Query: 95 MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED-KVD-KLYGALLNCYVREGL 152
M G ++H + V L+ + + + E + + + K D ++ ++L YV
Sbjct: 909 MKAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIED 968
Query: 153 VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
+++ + Q++KE G YN ++ +Y + E+ ++ +M+ G+ P +Y+
Sbjct: 969 FRKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRDHRPEEGFSLMHEMRVAGLEPKLDTYKS 1028
Query: 213 CINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDI 272
+ S+G + + E + +E++S+ +D Y T+ Y +G KA E +
Sbjct: 1029 LVASFGKQQLVEQAEELFEELQSKG-CKLDRSFYHTMMKIYRNSGSHSKA-------ERL 1080
Query: 273 VSKSKDA-----LGYNHLI-SHYASLGNKDEMMK 300
S KDA + HL+ Y S G E K
Sbjct: 1081 FSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEK 1114
>gi|255660904|gb|ACU25621.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 484
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 97/432 (22%), Positives = 186/432 (43%), Gaps = 32/432 (7%)
Query: 79 LRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAETYFNSLN------ 131
L S K +HALQ W+ L + H ++++G+ L A +
Sbjct: 19 LHSAKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEW 78
Query: 132 DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
DED ++ +++ Y +EG+V ES+ + QKM+E+G + +YN + G++
Sbjct: 79 DED----MWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKAILRRGRYMMA 134
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
M G+ P ++ + I + ++ + ++M+S+ IS D TY+T+ N
Sbjct: 135 KRYFNKMLSEGIEPARHTFNVMIWGFFLSGKVETANRFFEDMKSR-EISPDVVTYNTMIN 193
Query: 252 -YYIIAGLKEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
YY + ++E +++ K +I + Y LI Y S+ D+ ++ K
Sbjct: 194 GYYRVKKMEEAEKYFVEMKGRNI---EPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFG 250
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQ--KGMIEK 367
K Y T+L L G++ EA +L+E + Y + L SQ G ++
Sbjct: 251 IKPNAITYSTLLPGLCNAGKMIEARSILKEM-MDKYLAPTDNSIFMRLISSQCNSGNLDA 309
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPK---- 423
A VLK +++ + ++ + ++A + + + + E++ RP+
Sbjct: 310 AADVLKAMIRLSVPTEAGHYGVLIENFCKAGQYDQAVKLLDKLI---EKDIILRPQSTLH 366
Query: 424 --PSLVSSILDWLGDNRDVEEVEAFVSS-LKIKVQKRNMYHALTEAHIRSGQEVDG--LL 478
PS + ++++L +N + EA V LK+ VQ + L H + G LL
Sbjct: 367 LEPSAYNPMIEYLCNNGQAAKAEALVRQLLKLGVQDPTALNTLIRGHSQEGSPDSAFELL 426
Query: 479 ESMKADDIDEDK 490
+ M +D +K
Sbjct: 427 KIMLRRKVDSEK 438
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 138/325 (42%), Gaps = 44/325 (13%)
Query: 116 KVRGLESAETYFNSL---NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
+V+ +E AE YF + N E V Y L+ YV VD++L L+++MK G +A
Sbjct: 197 RVKKMEEAEKYFVEMKGRNIEPTV-VTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNA 255
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP-DNFSYRICINSYGARSELSSMENVLQ 231
+ Y+ ++ N G+ + +L +M + + P DN + I+S L + +VL+
Sbjct: 256 ITYSTLLPGLCNAGKMIEARSILKEMMDKYLAPTDNSIFMRLISSQCNSGNLDAAADVLK 315
Query: 232 EMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC--EDIVSKSKDALGYNHLISHY 289
M S + + G Y + + AG ++A+ L K +DI+ + + L HL
Sbjct: 316 AMIRLS-VPTEAGHYGVLIENFCKAGQYDQAVKLLDKLIEKDIILRPQSTL---HLEPS- 370
Query: 290 ASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDF 349
Y M+ L G+ +AE ++ + L D
Sbjct: 371 --------------------------AYNPMIEYLCNNGQAAKAEALVRQL-LKLGVQDP 403
Query: 350 RVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
N ++ G+SQ+G + A +LK ++++ +++ + Y KN A K
Sbjct: 404 TALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKKNEPADA----KA 459
Query: 410 ALAVHEENKFWRPKPSLVSSILDWL 434
AL EN P SL S+++ L
Sbjct: 460 ALDSMIENDHL-PDSSLFRSVMESL 483
>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 827
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 167/380 (43%), Gaps = 47/380 (12%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDH---AVQLDLIGKVRGLESAETYFNSLN 131
+I+ L K+ A+ V W+ + SV + AV + ++GK + +A + N+L
Sbjct: 150 IIKGLGFYKKCDMAMSVFSWVREREDFESVLNCSVVAVIITMLGKEGKVSAASSILNNLR 209
Query: 132 DEDKVD---KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQH 188
+D D Y +L+ Y G +++ + +KM+E G + + YN I+ +Y G
Sbjct: 210 -KDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEEEGCKPTLITYNVILNVYGKMGMP 268
Query: 189 -EKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYS 247
KI ++ MK +GV PD+++Y I+ S V +EM+ S S D T++
Sbjct: 269 WSKISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYEEAAQVFEEMK-LSGFSPDKVTFN 327
Query: 248 TVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGN-------KDEMMK 300
T+ + Y + ++A+ LK+ E S + YN LIS YA G KD+M++
Sbjct: 328 TLLDVYGKSRRPKEAMEVLKEME-FSGFSPSIVTYNSLISAYARDGLLREAMELKDQMVE 386
Query: 301 -------------FWGLQKIKCKKQLNRDY-----------ITMLGSLVKI----GELEE 332
G +K + R + I +L+K+ G E
Sbjct: 387 KGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAE 446
Query: 333 AEKMLEEWELSCYCY-DFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIA 391
K+ EE E+ C C D N +L + Q GM + V KE+ + G P ++++ +
Sbjct: 447 MMKVFEEIEI-CNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLI 505
Query: 392 AGYADKNNMEKAFECMKEAL 411
+ Y+ + ++A K L
Sbjct: 506 SAYSRCGSFQQAMAVYKRML 525
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 78/385 (20%), Positives = 163/385 (42%), Gaps = 33/385 (8%)
Query: 107 HAVQLDLIGKVRGL------ESAETYFNSLNDEDKVDKLYGALLNCYV---------REG 151
+++ +D++G ++GL + A + F+ + + + + ++LNC V +EG
Sbjct: 141 NSLSMDVLGIIKGLGFYKKCDMAMSVFSWVREREDFE----SVLNCSVVAVIITMLGKEG 196
Query: 152 LVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYR 211
V + S++ +++ G Y ++ Y + G++ V M+E G P +Y
Sbjct: 197 KVSAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEEEGCKPTLITYN 256
Query: 212 ICINSYGARS-ELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCE 270
+ +N YG S + ++ M+S S ++ D TY+T+ + L E+A ++ +
Sbjct: 257 VILNVYGKMGMPWSKISGLVHGMKS-SGVAPDDYTYNTLISCCRRGSLYEEAAQVFEEMK 315
Query: 271 DIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGEL 330
+ S D + +N L+ Y E M+ + Y +++ + + G L
Sbjct: 316 -LSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLL 374
Query: 331 EEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSII 390
EA ++ ++ D +L G+ + GM E A + E+ G P +++ +
Sbjct: 375 REAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNAL 434
Query: 391 AAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVS--SILDWLGDNRDVEEVEAFVS 448
+ ++ E + V EE + P +V+ ++L G N EV
Sbjct: 435 IKMHGNRGR-------FAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFK 487
Query: 449 SLKIK--VQKRNMYHALTEAHIRSG 471
+K V +R+ ++ L A+ R G
Sbjct: 488 EMKRAGFVPERDTFNTLISAYSRCG 512
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 132/324 (40%), Gaps = 28/324 (8%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I R ++ A QV E M G + LD+ GK R + A +
Sbjct: 294 LISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSG 353
Query: 135 KVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+ Y +L++ Y R+GL+ E++ L +M E G Y ++ + G E
Sbjct: 354 FSPSIVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAM 413
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
+ +M+ G P+ ++ I +G R + M V +E+E + + D T++T+
Sbjct: 414 RIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEI-CNCAPDIVTWNTLLAV 472
Query: 253 YIIAGLKEKAIIYLKKCEDI-VSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKK 311
+ G+ + K+ + +D +N LIS Y+ G+ + M + K +
Sbjct: 473 FGQNGMDSEVSGVFKEMKRAGFVPERDT--FNTLISAYSRCGSFQQAMAVY---KRMLEA 527
Query: 312 QLNRD---YITMLGSLVKIGELEEAEKMLEEW--------ELSCYCYDFRVPNIILLGYS 360
+ D Y +L +L + G E++EK+ E EL+ YC +L Y+
Sbjct: 528 GVTPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGRCKPNELT-YCS-------LLHAYA 579
Query: 361 QKGMIEKADAVLKEIVKKGKTPTP 384
IE+ + +EI P P
Sbjct: 580 NSKEIERMHTLAEEIYSGLTEPVP 603
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 70/363 (19%), Positives = 147/363 (40%), Gaps = 13/363 (3%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
VL + G S + +I + A+++ + M +G+ V + L
Sbjct: 345 VLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFE 404
Query: 116 KVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
K E A F + + + AL+ + G E + + ++++ +
Sbjct: 405 KAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIV 464
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
+N ++ ++ G ++ V +MK G P+ ++ I++Y V + M
Sbjct: 465 TWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRM 524
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLG 293
++ ++ D +Y+ V GL E++ + +D K + L Y L+ YA
Sbjct: 525 -LEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGRCKPNE-LTYCSLLHAYA--- 579
Query: 294 NKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGE----LEEAEKMLEEWELSCYCYDF 349
N E+ + L + + L +L +LV + L E E EE + D
Sbjct: 580 NSKEIERMHTLAE-EIYSGLTEPVPVLLKTLVLVNSKCDLLMETEHAFEELKKKG-SPDL 637
Query: 350 RVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
N ++ Y ++ M+ KA+ +L + + G +P+ +++ + ++ N E++ E +KE
Sbjct: 638 STLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLMYMHSRSENFERSEEVLKE 697
Query: 410 ALA 412
LA
Sbjct: 698 ILA 700
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 1/122 (0%)
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
A++ Y R +V ++ ++ M E G S YN +M +++ + E+ +VL ++
Sbjct: 642 AMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLMYMHSRSENFERSEEVLKEILAK 701
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
G+ PD SY I +Y + + M++ + D TY+T Y L E
Sbjct: 702 GLKPDLISYNTVIFAYCRNGRMKDASRIFSYMKTYGLVP-DVITYNTFVASYAADSLFED 760
Query: 262 AI 263
AI
Sbjct: 761 AI 762
>gi|218200516|gb|EEC82943.1| hypothetical protein OsI_27919 [Oryza sativa Indica Group]
Length = 500
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 159/339 (46%), Gaps = 24/339 (7%)
Query: 52 SLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEW-MSGQGLAFSVHDHAVQ 110
S+ + W+ +G+ + + + +LR R+ + ALQV EW M + S D++
Sbjct: 64 SVCAAIRGWMGDGRAVHRGHVFHAVNRLRRRRLHRAALQVMEWIMRERPYKLSELDYSYL 123
Query: 111 LDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFG 170
L+ KV G+ AE+ F + E + + LY L+ + GL+ + +KM+E+
Sbjct: 124 LEFTAKVHGISEAESLFLRIPQEYQNELLYNNLVMACLDLGLIKLAYGYKRKMRELSLPI 183
Query: 171 SALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVL 230
S YN ++ L+++ G+ + I +L MK + V P +Y I + + + V
Sbjct: 184 SPYVYNRLIILHSSPGRQKTISKILAQMKGDRVTPHTSTYNILLKIKANEHNIDGVARVF 243
Query: 231 QEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYA 290
+M+ ++ + + TY +A + +A L + Y++ E+ ++ + + L+ Y
Sbjct: 244 NDMK-RAKVEPNEITYGILAIAHAVARLYTVSHTYVEAIENSMTGTNWS-TLEILLILYG 301
Query: 291 SLGNKDEMMKFW----GLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYC 346
G E+ W GL I+ K +I + + K+G +++AE++ ++E +
Sbjct: 302 YHGKAKELKMTWDLMQGLPHIRPK-----SFILAIEAFGKVGSIDQAEEIWGKFEST--- 353
Query: 347 YDFRVP------NIILLGYSQKGMIEKADAVLKEIVKKG 379
R P N IL Y + G+++KA AV KE+ G
Sbjct: 354 ---RKPKLTEQFNSILSVYCRHGLVDKASAVFKEMRANG 389
>gi|255660896|gb|ACU25617.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 484
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 94/432 (21%), Positives = 187/432 (43%), Gaps = 32/432 (7%)
Query: 79 LRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAETYFNSLN------ 131
L S K +HALQ W+ L + H ++++G+ L A +
Sbjct: 19 LHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEW 78
Query: 132 DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
DED ++ +++ Y +EG+V ES+ + QKM+E+G + +YN + + G++
Sbjct: 79 DED----MWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMA 134
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
M G+ P ++ + I + ++ + ++M+S+ IS D TY+T+ N
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR-EISPDVVTYNTMIN 193
Query: 252 -YYIIAGLKEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
YY + ++E +++ K +I + Y LI Y S+ D+ ++ K
Sbjct: 194 GYYRVKKMEEAEKYFVEMKGRNI---EPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFG 250
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYC--YDFRVPNIILLGYSQKGMIEK 367
K Y T+L L ++ EA +L+E + Y D + ++ + + G ++
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARVILKEM-MDKYLAPTDNXIFMRLISSHCKSGNLDA 309
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPK---- 423
A VLK +++ + ++ + +KA + + + + E++ RP+
Sbjct: 310 AADVLKAMIRLSVPTEAGHYGVLIENFCKXGQYDKAVKLLDKLI---EKDIILRPQSTLH 366
Query: 424 --PSLVSSILDWLGDNRDVEEVEAFVSSL-KIKVQKRNMYHALTEAHIRSGQEVDG--LL 478
PS + ++++L +N + E V L K+ VQ + L H + G LL
Sbjct: 367 LEPSAYNPMIEYLCNNGQAXKAETLVRQLXKLGVQDPTALNTLIRGHSQEGSPDSAFELL 426
Query: 479 ESMKADDIDEDK 490
+ M +D +K
Sbjct: 427 KIMLRRKVDSEK 438
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 140/330 (42%), Gaps = 54/330 (16%)
Query: 116 KVRGLESAETYFNSL---NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
+V+ +E AE YF + N E V Y L+ YV VD++L L+++MK G +A
Sbjct: 197 RVKKMEEAEKYFVEMKGRNIEPTV-VTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNA 255
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP-DNFSYRICINSYGARSELSSMENVLQ 231
+ Y+ ++ N + + +L +M + + P DN + I+S+ L + +VL+
Sbjct: 256 ITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNXIFMRLISSHCKSGNLDAAADVLK 315
Query: 232 EMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC--EDIVSKSKDAL-----GYNH 284
M S + + G Y + + G +KA+ L K +DI+ + + L YN
Sbjct: 316 AMIRLS-VPTEAGHYGVLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNP 374
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSC 344
+I + + G Q K + T++ L K+G
Sbjct: 375 MIEYLCNNG-----------QAXKAE--------TLVRQLXKLG---------------- 399
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
D N ++ G+SQ+G + A +LK ++++ ++++ + Y KN A
Sbjct: 400 -VQDPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDA- 457
Query: 405 ECMKEALAVHEENKFWRPKPSLVSSILDWL 434
K AL EN P +L S+++ L
Sbjct: 458 ---KAALDSMIENDHL-PDSALFRSVMESL 483
>gi|168024876|ref|XP_001764961.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683770|gb|EDQ70177.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 743
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 98/199 (49%), Gaps = 6/199 (3%)
Query: 109 VQLDLIGKVRGLESAETYFNSLNDEDKVDKL-YGALLNCYVREGLVDESLSLMQKMKEMG 167
V +DL GK E A DK+ + L++ Y ++ + + +M+ G
Sbjct: 541 VMIDLYGKAGMPERAHKALKLAQQFGSADKISFSTLVHAYAKKQDFPNMEAALWEMQNAG 600
Query: 168 SFGSALN-YNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSM 226
+GS+L YN I+ Y GQ EK+ DVL M+ +G+ D SY I IN+YG ++ M
Sbjct: 601 -YGSSLEAYNSILDAYGKAGQMEKVSDVLARMENSGMRMDLASYNILINTYGKNYMIAEM 659
Query: 227 ENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLI 286
E + + M+ + + W TY+T+ Y A ++A+ + K +D S D + Y L+
Sbjct: 660 ETLFRTMQEEGVVPDRW-TYNTIIRTYGFADYPDRAVYWFKAMQD-AGISPDRVTYMILV 717
Query: 287 SHYASLGNKDEMMKFWGLQ 305
S + GN DE + W L+
Sbjct: 718 STFERAGNIDEAAR-WCLR 735
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/364 (21%), Positives = 159/364 (43%), Gaps = 39/364 (10%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +L Y R V E+ S+ M G + + Y+ ++ LY G EK ++ +M+
Sbjct: 85 YSMMLLLYQRHRKVAEAESVFSHMLNSG-VQAVVAYSVMIALYNREGLFEKSEQIVTEMR 143
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
N V PD ++ +N+YG + ++ E ++ +E +S +S+ Y+++ Y A L
Sbjct: 144 RNNVTPDRDNWLKQLNTYGQQGKIEEAERIMDTVE-ESGMSLGLVGYNSMITAYGKACLY 202
Query: 260 EKAIIYLKKC--EDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
+KA ++K ED+V D++ Y+ +I +G E + ++ K K + ++
Sbjct: 203 DKAARLVEKMREEDLVP---DSITYSCMIGACGRVGKLKEALSWFAEMKRLEIKPASSNF 259
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
T++ K ++E +++ E + D++ + + Y + G+I+ +L +
Sbjct: 260 NTLISLYGKAKDVEGIVRVITEMKKYGCKPDWQTLDAAVRAYDRAGLIKDVTEILNLLRD 319
Query: 378 KGKTPTPNSWSII---------------------AAGYADKNNMEKAFEC-------MKE 409
G S+ + AG A K M ++ C
Sbjct: 320 AGWVEETGSYGTLLHVYLKCNLPKEALRIFLAMRKAGMAPKEYMCRSLICTFRDAEMFDG 379
Query: 410 ALAVHEENKFWRPKPSLVSS--ILDWLGDNRDVEEVEAFVSSLKIKVQKRNM--YHALTE 465
A +V +E + PSL SS ++ G N DV+E E SL+ V++ ++ Y+ +
Sbjct: 380 AKSVFKEMQVAGVTPSLESSCTMIYVYGMNGDVKEAEGLFHSLRSSVKRLDIFAYNVMIN 439
Query: 466 AHIR 469
++R
Sbjct: 440 VYMR 443
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/353 (20%), Positives = 149/353 (42%), Gaps = 10/353 (2%)
Query: 64 GQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESA 123
G E + +I R + F A V + M G+ S+ + + G ++ A
Sbjct: 356 GMAPKEYMCRSLICTFRDAEMFDGAKSVFKEMQVAGVTPSLESSCTMIYVYGMNGDVKEA 415
Query: 124 ETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCL 181
E F+SL K + Y ++N Y+R + + ++ + + M+E A Y+ ++ +
Sbjct: 416 EGLFHSLRSSVKRLDIFAYNVMINVYMRCDMPEGAIKVYKLMEEDHLLPDAYTYHSMLRM 475
Query: 182 YTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISM 241
+ ++ ++ + V D +N+ L M + QEM ++
Sbjct: 476 CQKCNLPAQAEEIYWRLRNSDVELDEVMCNCVLNTCAKFLPLEEMHKLFQEMIDVGYVPY 535
Query: 242 DWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEM-MK 300
+ T++ + + Y AG+ E+A LK + S D + ++ L+ YA + M
Sbjct: 536 NI-TFNVMIDLYGKAGMPERAHKALKLAQQF--GSADKISFSTLVHAYAKKQDFPNMEAA 592
Query: 301 FWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYS 360
W +Q L Y ++L + K G++E+ +L E S D NI++ Y
Sbjct: 593 LWEMQNAGYGSSLEA-YNSILDAYGKAGQMEKVSDVLARMENSGMRMDLASYNILINTYG 651
Query: 361 QKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA---FECMKEA 410
+ MI + + + + + ++G P +++ I Y + ++A F+ M++A
Sbjct: 652 KNYMIAEMETLFRTMQEEGVVPDRWTYNTIIRTYGFADYPDRAVYWFKAMQDA 704
>gi|224073298|ref|XP_002304067.1| predicted protein [Populus trichocarpa]
gi|222841499|gb|EEE79046.1| predicted protein [Populus trichocarpa]
Length = 378
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 143/318 (44%), Gaps = 10/318 (3%)
Query: 148 VREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDN 207
V++G ++L L+Q++ G ++ Y ++ + + + E+ MK+ G P+
Sbjct: 3 VKDG-YSKALDLVQELNYNGLQMDSVMYGTLLAVCASNNRCEEAQSYFNQMKDEGHSPNI 61
Query: 208 FSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLK 267
+ Y +N+Y + E ++Q+M+S S + + +T Y+ L EK+ L
Sbjct: 62 YHYSSLLNAYASGGNYKKAEELVQDMKS-SGLVPNKVMLTTQLKVYVRGRLFEKSRDLLV 120
Query: 268 KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKI 327
+ D + +KD + Y L+ A G DE + K KC K Y M+ S +
Sbjct: 121 EL-DTLGFAKDEMPYCLLMDGLAKTGCIDEARSVFNEMKEKCVKPGGYSYSIMISSFCRG 179
Query: 328 GELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSW 387
G EEA+++ EE+E YD + N IL Y + G +E ++++ + +P N++
Sbjct: 180 GLFEEAKELAEEFEAKYDKYDVAISNAILCAYCRAGEMESVMRTMRKMDELAISPDYNTF 239
Query: 388 SIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFV 447
I+ + + A++ M++ K +P L SS+L LG + EAF
Sbjct: 240 HILIKYFCKEKLYMLAYQTMEDM-----HRKGHQPAEELCSSLLFHLGKIK--AHSEAFS 292
Query: 448 SSLKIKVQKRNMYHALTE 465
+K KR M A E
Sbjct: 293 VYSMLKYSKRTMCKAFHE 310
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 79/186 (42%), Gaps = 3/186 (1%)
Query: 79 LRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDK 138
++ + + AL + + ++ GL + L + E A++YFN + DE
Sbjct: 1 MKVKDGYSKALDLVQELNYNGLQMDSVMYGTLLAVCASNNRCEEAQSYFNQMKDEGHSPN 60
Query: 139 L--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
+ Y +LLN Y G ++ L+Q MK G + + + +Y EK D+L+
Sbjct: 61 IYHYSSLLNAYASGGNYKKAEELVQDMKSSGLVPNKVMLTTQLKVYVRGRLFEKSRDLLV 120
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
++ G D Y + ++ + +V EM+ + + +YS + + +
Sbjct: 121 ELDTLGFAKDEMPYCLLMDGLAKTGCIDEARSVFNEMKEKC-VKPGGYSYSIMISSFCRG 179
Query: 257 GLKEKA 262
GL E+A
Sbjct: 180 GLFEEA 185
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/390 (21%), Positives = 165/390 (42%), Gaps = 14/390 (3%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLD-LIGKVRGLESAETYFNSLNDEDKVDKL--YGALL 144
AL + G V + LD I R + AE F + + Y L+
Sbjct: 153 ALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILI 212
Query: 145 NCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVP 204
+ G +D +L +M++ G + + YN ++ Y + + ++L M G+
Sbjct: 213 RGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLE 272
Query: 205 PDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG-LKEKAI 263
P+ SY + IN + + VL EM + + S+D TY+T+ Y G + +
Sbjct: 273 PNLISYNVVINGLCREGRMKEISFVLTEMNKRGY-SLDEVTYNTLIKGYCKEGNFHQALV 331
Query: 264 IYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGS 323
++ + +S S + Y LI GN + +F +++ R Y T++
Sbjct: 332 MHAEMLRHGLSPS--VITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDG 389
Query: 324 LVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPT 383
+ G + EA ++L+E + + N ++ G+ G + A AVL+++ +KG TP
Sbjct: 390 FSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPD 449
Query: 384 PNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEE- 442
S+S + +G+ ++++A ++ +A K +P SS++ + R +E
Sbjct: 450 VVSYSTVLSGFCRSYDVDEALRVKRKMVA-----KGIKPDTITYSSLIQGFCEQRRTKEA 504
Query: 443 VEAFVSSLKIKVQKRNM-YHALTEAHIRSG 471
+ F L++ + Y AL A+ G
Sbjct: 505 CDLFDEMLRVGLPPDEFTYTALINAYCMEG 534
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 164/380 (43%), Gaps = 37/380 (9%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
VL + G + E+ +I+ F AL + M GL+ SV + + +
Sbjct: 297 VLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMC 356
Query: 116 KVRGLESAETYFNSLNDEDKV--DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
K + A + + + ++ Y L++ + ++G ++E+ ++++M + G S +
Sbjct: 357 KAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVV 416
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
YN ++ + G+ VL DMKE G+ PD SY ++ + ++ V ++M
Sbjct: 417 TYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKM 476
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDI------VSKSKDALGYNHLIS 287
++ I D TYS+ +I G E+ K+ D+ V D Y LI+
Sbjct: 477 VAKG-IKPDTITYSS-----LIQGFCEQR--RTKEACDLFDEMLRVGLPPDEFTYTALIN 528
Query: 288 HYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT---MLGSLVKIGELEEAEKML-----EE 339
Y G ++ K L +K + D +T ++ L K EA+++L EE
Sbjct: 529 AYCMEG---DLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEE 585
Query: 340 WELS----------CYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSI 389
S C +F+ ++ G+ KGM+ +AD V + +++K P ++++
Sbjct: 586 SVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNV 645
Query: 390 IAAGYADKNNMEKAFECMKE 409
+ G+ ++ KA+ KE
Sbjct: 646 MIHGHCRGGDIRKAYSLYKE 665
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/372 (21%), Positives = 155/372 (41%), Gaps = 49/372 (13%)
Query: 112 DLIGKVRGLESAETYFNSLNDE----DKVDKLYGALLNCYVREGLVDESLSLMQKMKEMG 167
D+ K E A F SL + + ++ ++ Y R L+D++LS++ + G
Sbjct: 105 DVAAKTLDDEDASLVFRSLQETYDLCNSTSSVFDLVVKSYSRLCLIDKALSIVHLSQAHG 164
Query: 168 SFGSALNYNGIMCLYTNTGQHEKIP-DVLLDMKENGVPPDNFSYRICINSYGARSELSSM 226
L+YN ++ + ++ +V +M ++ V P+ F+Y I I + L
Sbjct: 165 FMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVA 224
Query: 227 ENVLQEMESQSHISMDWGTYSTVANYYI----------------IAGLKEKAIIY----- 265
ME + + + TY+T+ + Y + GL+ I Y
Sbjct: 225 LRFFDRMEKKGCLP-NVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVIN 283
Query: 266 -------LKKCEDIVSK------SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQ 312
+K+ ++++ S D + YN LI Y GN + +
Sbjct: 284 GLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSP 343
Query: 313 LNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
Y +++ S+ K G + A + L++ + C + R ++ G+SQKG + +A VL
Sbjct: 344 SVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLV--SSI 430
KE++ G +P+ +++ + G+ M +A+AV E+ K P +V S++
Sbjct: 404 KEMIDNGFSPSVVTYNALINGHCIAGK-------MVDAIAVLEDMKEKGLTPDVVSYSTV 456
Query: 431 LDWLGDNRDVEE 442
L + DV+E
Sbjct: 457 LSGFCRSYDVDE 468
>gi|115463017|ref|NP_001055108.1| Os05g0294600 [Oryza sativa Japonica Group]
gi|113578659|dbj|BAF17022.1| Os05g0294600 [Oryza sativa Japonica Group]
gi|125551683|gb|EAY97392.1| hypothetical protein OsI_19323 [Oryza sativa Indica Group]
gi|215697097|dbj|BAG91091.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630985|gb|EEE63117.1| hypothetical protein OsJ_17925 [Oryza sativa Japonica Group]
Length = 757
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 151/331 (45%), Gaps = 11/331 (3%)
Query: 80 RSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV--- 136
+S+ K A + + M +G+ +S+ D + L I GL++ S ++ +
Sbjct: 350 KSKTSAKDAWEFFQRMERKGVKWSL-DICISLIKIFCDNGLKTEALIIQSAMEKKGIASN 408
Query: 137 DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
+Y L+N Y + ++E+ + +MKE G +A+ YN +M Y Q E + +LL
Sbjct: 409 TSMYNTLINAYCKANQIEEAEGVFVEMKEKGLSATAMTYNILMGAYCRRLQPEVVESLLL 468
Query: 197 DMKENGVPPDNFSYRICINSYGARSELS-SMENVLQEMESQSHISMDWGTYSTVANYYII 255
+M++ G+ P+ SY I YG + ++S E+ M++ + TY+++ Y +
Sbjct: 469 EMQDLGLRPNARSYNFLIRVYGQQKKMSEKAEDAFLRMKTDGIMPTS-STYTSLLCAYAV 527
Query: 256 AGLKEKA-IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN 314
GL EKA + Y+ + + S + Y LI + G+ +++M+ W I K
Sbjct: 528 NGLHEKAYLTYVDMKREGLKPSLET--YTALIDMFRRAGDTEKLMETW-RSMINEKVPGT 584
Query: 315 RDYITM-LGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
R M L L K G +A ++ E+ + NI++ +++ G K +LK
Sbjct: 585 RVIFHMVLDGLAKHGLYVQATDVIYEFRRAGLQPTVMTYNILMNAFARGGQHYKLPQLLK 644
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
E+ P ++S + YA + +AF
Sbjct: 645 EMAAMELKPDSVTYSTMIYAYARVRDFSRAF 675
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 143/350 (40%), Gaps = 30/350 (8%)
Query: 149 REGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNF 208
R + DE L +++ + F A+ YN M G+++ V M++ + PD+
Sbjct: 280 RAQMADEVLEIVESLPPERRFSEAVLYNAAMSGLAYRGRYDDTWKVFKLMEKKNIQPDHM 339
Query: 209 SYRICINSYG-ARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA--GLKEKAIIY 265
+ I ++ +++ Q ME + + W ++ I GLK +A+I
Sbjct: 340 TSLIMLDVMNKSKTSAKDAWEFFQRMERK---GVKWSLDICISLIKIFCDNGLKTEALII 396
Query: 266 LKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLV 325
E S ++ YN LI+ Y +E + K K Y ++G+
Sbjct: 397 QSAMEKKGIASNTSM-YNTLINAYCKANQIEEAEGVFVEMKEKGLSATAMTYNILMGAYC 455
Query: 326 KIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYS-QKGMIEKADAVLKEIVKKGKTPTP 384
+ + E E +L E + + R N ++ Y QK M EKA+ + G PT
Sbjct: 456 RRLQPEVVESLLLEMQDLGLRPNARSYNFLIRVYGQQKKMSEKAEDAFLRMKTDGIMPTS 515
Query: 385 NSWSIIAAGYADKNNMEKAF----ECMKEALAVHEENKFWRPKPSL--VSSILDWLGDNR 438
++++ + YA EKA+ + +E L KPSL ++++D
Sbjct: 516 STYTSLLCAYAVNGLHEKAYLTYVDMKREGL-----------KPSLETYTALIDMFRRAG 564
Query: 439 DVEEV-EAFVSSLKIKVQ-KRNMYHALTEAHIRSG---QEVDGLLESMKA 483
D E++ E + S + KV R ++H + + + G Q D + E +A
Sbjct: 565 DTEKLMETWRSMINEKVPGTRVIFHMVLDGLAKHGLYVQATDVIYEFRRA 614
>gi|255660868|gb|ACU25603.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 484
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/432 (21%), Positives = 187/432 (43%), Gaps = 32/432 (7%)
Query: 79 LRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAETYFNSLN------ 131
L S K +HALQ W+ L + H ++++G+ L A +
Sbjct: 19 LHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEW 78
Query: 132 DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
DED ++ +++ Y +EG+V ES+ + QKM+E+G + +YN + + G++
Sbjct: 79 DED----MWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMA 134
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
M G+ P ++ + I + ++ + ++M+S+ IS D TY+T+ N
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR-EISPDVVTYNTMIN 193
Query: 252 -YYIIAGLKEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
YY + ++E +++ K +I + Y LI Y S+ D+ ++ K
Sbjct: 194 GYYRVKKMEEAEKYFVEMKGRNI---EPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFG 250
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYC--YDFRVPNIILLGYSQKGMIEK 367
K Y T+L L ++ EA +L+E + Y D + ++ + + G ++
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARVILKEM-MDKYLAPTDNSIFMRLISSHCKSGNLDA 309
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPK---- 423
A VLK +++ + ++ + +KA + + + + E++ RP+
Sbjct: 310 AADVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKAVKLLDKLI---EKDIILRPQSTLH 366
Query: 424 --PSLVSSILDWLGDNRDVEEVEAFVSSL-KIKVQKRNMYHALTEAHIRSGQEVDG--LL 478
PS + ++++L +N + E V L K+ VQ + L H + G LL
Sbjct: 367 LEPSAYNPMIEYLCNNGQASKAETLVRQLMKLGVQDPTALNTLIRGHSQEGSPDSAFELL 426
Query: 479 ESMKADDIDEDK 490
+ M +D +K
Sbjct: 427 KIMLRRKVDSEK 438
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 143/330 (43%), Gaps = 54/330 (16%)
Query: 116 KVRGLESAETYFNSL---NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
+V+ +E AE YF + N E V Y L+ YV VD++L L+++MK G +A
Sbjct: 197 RVKKMEEAEKYFVEMKGRNIEPTV-VTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNA 255
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP-DNFSYRICINSYGARSELSSMENVLQ 231
+ Y+ ++ N + + +L +M + + P DN + I+S+ L + +VL+
Sbjct: 256 ITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLK 315
Query: 232 EMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC--EDIVSKSKDAL-----GYNH 284
M S + + G Y + + AG +KA+ L K +DI+ + + L YN
Sbjct: 316 AMIRLS-VPTEAGHYGLLIENFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNP 374
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSC 344
+I + + G Q K + T++ L+K+G
Sbjct: 375 MIEYLCNNG-----------QASKAE--------TLVRQLMKLG---------------- 399
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
D N ++ G+SQ+G + A +LK ++++ ++++++ Y KN A
Sbjct: 400 -VQDPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNLLVQSYLKKNEPXDA- 457
Query: 405 ECMKEALAVHEENKFWRPKPSLVSSILDWL 434
K AL EN P +L S+++ L
Sbjct: 458 ---KAALDSMIENDHL-PDSALFRSVMESL 483
>gi|255660902|gb|ACU25620.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 484
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 96/432 (22%), Positives = 186/432 (43%), Gaps = 32/432 (7%)
Query: 79 LRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAETYFNSLN------ 131
L S K +HALQ W+ L + H ++++G+ L A +
Sbjct: 19 LHSAKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEW 78
Query: 132 DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
DED ++ +++ Y +EG+V ES+ + QKM+E+G + +YN + + G++
Sbjct: 79 DED----MWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFXVILRRGRYMMA 134
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
M G+ P ++ + I + ++ + ++M+S+ IS D TY+T+ N
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR-EISPDVVTYNTMIN 193
Query: 252 -YYIIAGLKEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
YY + ++E +++ K +I + Y LI Y S+ D+ ++ K
Sbjct: 194 GYYRVKKMEEAEKYFVEMKGRNI---EPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFG 250
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQ--KGMIEK 367
K Y T+L L ++ EA +L+E + Y + L SQ G ++
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMTEARSILKEM-MDKYLAPTDNSIFMRLISSQCNSGNLDA 309
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPK---- 423
A VLK +++ + ++ + ++A + + + + E++ RP+
Sbjct: 310 AADVLKAMIRLSVPTEAGHYGVLIENFCKAGQYDQAVKLLDKLI---EKDIILRPQSTLH 366
Query: 424 --PSLVSSILDWLGDNRDVEEVEAFVSS-LKIKVQKRNMYHALTEAHIRSGQEVDG--LL 478
PS + ++++L +N + EA V LK+ VQ + L H + G LL
Sbjct: 367 LEPSAYNPMIEYLCNNGQAAKAEALVRQLLKLGVQDPTALNTLIRGHSQEGSPDSAFELL 426
Query: 479 ESMKADDIDEDK 490
+ M +D +K
Sbjct: 427 KIMLRRKVDSEK 438
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 164/392 (41%), Gaps = 34/392 (8%)
Query: 65 QKISELELQRVIRQLRS-------RKRFKHALQVSEWMSGQGLAFSVHDHAVQL---DLI 114
QK+ EL ++R I+ + R R+ A + M +G+ + H V + L
Sbjct: 104 QKMEELGVERTIKSYNALFXVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLS 163
Query: 115 GKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
GKV E+A +F + + + Y ++N Y R ++E+ +MK +
Sbjct: 164 GKV---ETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTV 220
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQE 232
+ Y ++ Y + Q + ++ +MK G+ P+ +Y + +++ ++L+E
Sbjct: 221 VTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMTEARSILKE 280
Query: 233 MESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASL 292
M + D + + + +G + A LK + S +A Y LI ++
Sbjct: 281 MMDKYLAPTDNSIFMRLISSQCNSGNLDAAADVLKAMIRL-SVPTEAGHYGVLIENFCKA 339
Query: 293 GNKDEMMKFWGLQKIKCKKQLNRD----------YITMLGSLVKIGELEEAEKMLEEWEL 342
G D+ +K L K+ K + R Y M+ L G+ +AE ++ + L
Sbjct: 340 GQYDQAVKL--LDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQAAKAEALVRQL-L 396
Query: 343 SCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEK 402
D N ++ G+SQ+G + A +LK ++++ ++++ + Y KN
Sbjct: 397 KLGVQDPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPAD 456
Query: 403 AFECMKEALAVHEENKFWRPKPSLVSSILDWL 434
A K AL EN P SL S+++ L
Sbjct: 457 A----KAALDSMIENDHL-PDSSLFRSVMESL 483
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 146/319 (45%), Gaps = 27/319 (8%)
Query: 100 LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED-KVDKLYGA-LLNCYVREGLVDESL 157
L+ + + +A+ +D + E A +F L +VD + + LL + DE+L
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168
Query: 158 S-LMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV--PPDNFSYRICI 214
L+ + E+G +YN ++ N G+ + D+L M E G PD +Y I
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVI 228
Query: 215 NSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVS 274
+ + +++ ++ +EM Q I D TYS+V + A +KA +L++ +V+
Sbjct: 229 DGFFKEGDVNKACDLFKEM-VQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQ---MVN 284
Query: 275 KS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI--------TMLGSL 324
K D YN+LI Y+S G E ++ + K++ R I T++GSL
Sbjct: 285 KGVLPDNWTYNNLIYGYSSTGQWKEAVRVF--------KEMRRQSILPDVVALNTLMGSL 336
Query: 325 VKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTP 384
K G+++EA + + + D I+L GY+ KG + + ++ G P
Sbjct: 337 CKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVI 396
Query: 385 NSWSIIAAGYADKNNMEKA 403
+++++ YA+ ++KA
Sbjct: 397 CTFNVLIKAYANCGMLDKA 415
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 79/384 (20%), Positives = 151/384 (39%), Gaps = 44/384 (11%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDK--LYGALLN 145
A + + M +G+ + ++ + + K R ++ AE + + ++ + Y L+
Sbjct: 240 ACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIY 299
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
Y G E++ + ++M+ + N +M G+ ++ DV M G P
Sbjct: 300 GYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNP 359
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
D FSY I +N Y + L M ++ M I+ T++ + Y G+ +KA+I
Sbjct: 360 DVFSYTIMLNGYATKGCLVDMTDLFDLMLGDG-IAPVICTFNVLIKAYANCGMLDKAMII 418
Query: 266 LKKCEDIVSKSKDALGYNHLISHYASLGNKDEMM-KFWGL-------------------- 304
+ D K + Y +I+ +G D+ M KF +
Sbjct: 419 FNEMRDHGVKPH-VVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFC 477
Query: 305 ---QKIKCKKQLN-------RDYITMLGSLV----KIGELEEAEKMLEEWELSCYCYDFR 350
+K K+ ++ R I GS++ K+G + +A+ + + D
Sbjct: 478 THGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAV 537
Query: 351 VPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEA 410
V N+++ GY G +EKA V +V G P + + GY +++ +E
Sbjct: 538 VYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREM 597
Query: 411 LAVHEENKFWRPKPSLVSSILDWL 434
L K +P L + I+D L
Sbjct: 598 L-----QKGIKPSTILYNIIIDGL 616
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/316 (18%), Positives = 130/316 (41%), Gaps = 17/316 (5%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ L+ Y G++D+++ + +M++ G + Y ++ G+ + + M
Sbjct: 399 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMI 458
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ GV PD ++Y I + L + ++ E+ + + +D + ++ N G
Sbjct: 459 DQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNG-MRLDIVFFGSIINNLCKLG-- 515
Query: 260 EKAIIYLKKCEDI---VSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
++ + D+ V DA+ YN L+ Y +G ++ ++ + +
Sbjct: 516 --RVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVG 573
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y T++ KIG ++E + E + NII+ G + G A E+
Sbjct: 574 YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMT 633
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVS--SILDWL 434
+ G ++SI+ G KN C EA+ + +E + K +++ +++ +
Sbjct: 634 ESGIAMNKCTYSIVLRGLF-KN------RCFDEAIFLFKELRAMNVKIDIITLNTMIAGM 686
Query: 435 GDNRDVEEVEAFVSSL 450
R VEE + +S+
Sbjct: 687 FQTRRVEEAKDLFASI 702
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 54/277 (19%), Positives = 109/277 (39%), Gaps = 41/277 (14%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +++ + +EG V+++ L ++M + G + Y+ ++ +K L M
Sbjct: 224 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMV 283
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHI-------------------- 239
GV PDN++Y I Y + + V +EM QS +
Sbjct: 284 NKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIK 343
Query: 240 --------------SMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDA---LGY 282
+ D +Y+ + N Y G ++ + D++ A +
Sbjct: 344 EARDVFDTMAMKGQNPDVFSYTIMLNGYATKG----CLVDMTDLFDLMLGDGIAPVICTF 399
Query: 283 NHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWEL 342
N LI YA+ G D+ M + + K Y+T++ +L +IG++++A + +
Sbjct: 400 NVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMID 459
Query: 343 SCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
D + ++ G+ G + KA ++ EI+ G
Sbjct: 460 QGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNG 496
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 80/442 (18%), Positives = 165/442 (37%), Gaps = 52/442 (11%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
V D ++GQ ++ ++ + + M G G+A + V +
Sbjct: 348 VFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYA 407
Query: 116 KVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
L+ A FN + D + Y ++ R G +D+++ +M + G
Sbjct: 408 NCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKY 467
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
Y+ ++ + G K +++ ++ NG+ D + IN+ + +N+ ++
Sbjct: 468 AYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIF-DL 526
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYAS 291
+ D Y+ + + Y + G EKA L+ + +VS + +GY L++ Y
Sbjct: 527 TVNVGLHPDAVVYNMLMDGYCLVGKMEKA---LRVFDAMVSAGIEPNVVGYGTLVNGYCK 583
Query: 292 LGNKDEMMKFWG--LQK----------------------IKCKKQLNR-----------D 316
+G DE + + LQK + K + +
Sbjct: 584 IGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCT 643
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y +L L K +EA + +E D N ++ G Q +E+A + I
Sbjct: 644 YSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASIS 703
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGD 436
+ G P ++SI+ + +E+A E + +N P L++ ++ L
Sbjct: 704 RSGLVPCAVTYSIMITNLIKEGLVEEA-----EDMFSSMQNAGCEPDSRLLNHVVRELLK 758
Query: 437 NRDVEEVEAFVSSLKIKVQKRN 458
++ A++S K+ +RN
Sbjct: 759 KNEIVRAGAYLS----KIDERN 776
>gi|115529197|dbj|BAF34331.1| pentatricopeptide repeat protein [Physcomitrella patens]
Length = 728
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 98/199 (49%), Gaps = 6/199 (3%)
Query: 109 VQLDLIGKVRGLESAETYFNSLNDEDKVDKL-YGALLNCYVREGLVDESLSLMQKMKEMG 167
V +DL GK E A DK+ + L++ Y ++ + + +M+ G
Sbjct: 526 VMIDLYGKAGMPERAHKALKLAQQFGSADKISFSTLVHAYAKKQDFPNMEAALWEMQNAG 585
Query: 168 SFGSALN-YNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSM 226
+GS+L YN I+ Y GQ EK+ DVL M+ +G+ D SY I IN+YG ++ M
Sbjct: 586 -YGSSLEAYNSILDAYGKAGQMEKVSDVLARMENSGMRMDLASYNILINTYGKNYMIAEM 644
Query: 227 ENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLI 286
E + + M+ + + W TY+T+ Y A ++A+ + K +D S D + Y L+
Sbjct: 645 ETLFRTMQEEGVVPDRW-TYNTIIRTYGFADYPDRAVYWFKAMQD-AGISPDRVTYMILV 702
Query: 287 SHYASLGNKDEMMKFWGLQ 305
S + GN DE + W L+
Sbjct: 703 STFERAGNIDEAAR-WCLR 720
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/353 (20%), Positives = 149/353 (42%), Gaps = 10/353 (2%)
Query: 64 GQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESA 123
G E + +I R + F A V + M G+ S+ + + G ++ A
Sbjct: 341 GMAPKEYMCRSLICTFRDAEMFDGAKSVFKEMQVAGVTPSLESSCTMIYVYGMNGDVKEA 400
Query: 124 ETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCL 181
E F+SL K + Y ++N Y+R + + ++ + + M+E A Y+ ++ +
Sbjct: 401 EGLFHSLRSSVKRLDIFAYNVMINVYMRCDMPEGAIKVYKLMEEDHLLPDAYTYHSMLRM 460
Query: 182 YTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISM 241
+ ++ ++ + V D +N+ L M + QEM ++
Sbjct: 461 CQKCNLPAQAEEIYWRLRNSDVELDEVMCNCVLNTCAKFLPLEEMHKLFQEMIDVGYVPY 520
Query: 242 DWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEM-MK 300
+ T++ + + Y AG+ E+A LK + S D + ++ L+ YA + M
Sbjct: 521 NI-TFNVMIDLYGKAGMPERAHKALKLAQQF--GSADKISFSTLVHAYAKKQDFPNMEAA 577
Query: 301 FWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYS 360
W +Q L Y ++L + K G++E+ +L E S D NI++ Y
Sbjct: 578 LWEMQNAGYGSSLEA-YNSILDAYGKAGQMEKVSDVLARMENSGMRMDLASYNILINTYG 636
Query: 361 QKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA---FECMKEA 410
+ MI + + + + + ++G P +++ I Y + ++A F+ M++A
Sbjct: 637 KNYMIAEMETLFRTMQEEGVVPDRWTYNTIIRTYGFADYPDRAVYWFKAMQDA 689
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 65/336 (19%), Positives = 129/336 (38%), Gaps = 48/336 (14%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
+L + + Y ++G ++E+ +M ++E G + YN ++ Y ++K ++
Sbjct: 137 RLISNVADTYGQQGKIEEAERIMDTVEESGMSLGLVGYNSMITAYGKACLYDKAARLVEK 196
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
M+E + PD+ +Y I + G +L + EM+ + I ++T+ + Y
Sbjct: 197 MREEDLVPDSITYSCMIGACGRVGKLKEALSWFAEMK-RLEIKPASSNFNTLISPY---- 251
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
K+KD G +I+ G K + + + L +D
Sbjct: 252 ----------------GKAKDVEGIVRVITEMKKYGCKPDWQTLDAAVRAYDRAGLIKDV 295
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
+L L G +EE +L Y + + ++A + + K
Sbjct: 296 TEILNLLRDAGWVEETGSY----------------GTLLHVYLKCNLPKEALRIFLAMRK 339
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSS--ILDWLG 435
G P + + D E A +V +E + PSL SS ++ G
Sbjct: 340 AGMAPKEYMCRSLICTFRDA-------EMFDGAKSVFKEMQVAGVTPSLESSCTMIYVYG 392
Query: 436 DNRDVEEVEAFVSSLKIKVQKRNM--YHALTEAHIR 469
N DV+E E SL+ V++ ++ Y+ + ++R
Sbjct: 393 MNGDVKEAEGLFHSLRSSVKRLDIFAYNVMINVYMR 428
>gi|297739653|emb|CBI29835.3| unnamed protein product [Vitis vinifera]
Length = 852
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/375 (22%), Positives = 162/375 (43%), Gaps = 25/375 (6%)
Query: 120 LESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNG 177
+E+ +T FN++ E + Y AL+ Y G+ E+ S+ ++K+ G ++Y
Sbjct: 355 IENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTS 414
Query: 178 IMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS 237
++ Y +G+ EK V M+ N P+ SY I++YG++ L+ +L EME ++
Sbjct: 415 LLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEME-RN 473
Query: 238 HISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDE 297
+ + + T+ G K K L E + + YN I Y S+G D+
Sbjct: 474 GVQPNIVSICTLLAACGRCGQKVKIKSVLSAAE-LRGIKLNTTAYNSAIGSYLSVGEYDK 532
Query: 298 MMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVP----- 352
+ + + K K Y ++ K+ + EA L+E D ++P
Sbjct: 533 ALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEM------MDLKIPLSKEV 586
Query: 353 -NIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
+ ++ YS++G + +A+++ ++ G P +++ + Y N EKA AL
Sbjct: 587 YSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKA-----SAL 641
Query: 412 AVHEENKFWRPKPSLVSSILDWL---GDNRDVEEVEAFVSSLKIKVQKRNMYHALTEAH- 467
+ E +P SS++ G V + F+ KI + + ++
Sbjct: 642 FLEMETDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFEMVSACSL 701
Query: 468 IRSGQEVDGLLESMK 482
+R +E+ GL++ M+
Sbjct: 702 LREWREIIGLIKLME 716
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 95/450 (21%), Positives = 195/450 (43%), Gaps = 33/450 (7%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHD--------H 107
+L++WV + S +IR++ +H++QV WM Q + +D H
Sbjct: 116 LLNRWV---GRFSRKNFPLLIREITQIGSLEHSVQVFRWMKNQKNYCARNDIYNMMIRLH 172
Query: 108 AVQLDLIGKVRGLESAETYFNSLNDEDKVD-KLYGALLNCYVREGLVDESLSLMQKMKEM 166
A + +++ + RGL +F K D + Y AL+N + R G ++++M M
Sbjct: 173 A-RHNIVDQARGL-----FFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRA 226
Query: 167 GSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSM 226
S YN ++ ++G ++ +V M ENGV PD ++ I +++Y ++ S +
Sbjct: 227 AIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKV 286
Query: 227 ENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS-KDALGYNHL 285
+ + M+ ++I D T + V + G KAI ++ S+ D + + +
Sbjct: 287 LSYFELMKG-TNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTI 345
Query: 286 ISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCY 345
I Y+ G + + + K Y ++G+ G +EA + E + + +
Sbjct: 346 IHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGF 405
Query: 346 CYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
D +L Y + G EKA V + + + P S++ + Y K + +A E
Sbjct: 406 HPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVE 465
Query: 406 CMKEALAVHEENKFWRPKPSLVS--SILDWLGDNRDVEEVEAFVSSLKIKVQKRNM--YH 461
+ E E N +P++VS ++L G ++++ +S+ +++ K N Y+
Sbjct: 466 ILHEM----ERNGV---QPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYN 518
Query: 462 ALTEAHIRSGQ--EVDGLLESMKADDIDED 489
+ +++ G+ + L +M+ + D
Sbjct: 519 SAIGSYLSVGEYDKALSLYRAMRTKKVKPD 548
>gi|255660874|gb|ACU25606.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 484
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 97/434 (22%), Positives = 185/434 (42%), Gaps = 36/434 (8%)
Query: 79 LRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAETYFNSLN------ 131
L S K +HALQ W+ L + H ++++G+ L A +
Sbjct: 19 LHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEW 78
Query: 132 DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
DED ++ +++ Y +EG+V ES+ + QKM+E+G + +YN + + G++
Sbjct: 79 DED----MWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMA 134
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
M G+ P ++ + I + ++ + ++M+S+ IS D TY+T+ N
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR-EISPDVVTYNTMIN 193
Query: 252 -YYIIAGLKEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
YY + ++E +++ K +I + Y LI Y S+ D+ ++ K
Sbjct: 194 GYYRVKKMEEAEKYFVEMKGRNI---EPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFG 250
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL----GYSQKGMI 365
K Y T+L L ++ EA +L+E Y N I L + + G +
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARVILKEM---MDKYLAPTDNSIFLRLISSHCKSGNL 307
Query: 366 EKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPK-- 423
+ A VLK +++ + I+ + +KA + + + + E++ RP+
Sbjct: 308 DAAADVLKAMIRLSVPTEAGHYGILIENFCKAGQYDKAVKLLDKLI---EKDIILRPQST 364
Query: 424 ----PSLVSSILDWLGDNRDVEEVEAFVSSL-KIKVQKRNMYHALTEAHIRSGQEVDG-- 476
PS + ++++L +N + E V L K+ VQ + L H + G
Sbjct: 365 LHLEPSAYNLMIEYLCNNGQASKAETLVRQLMKLGVQDPTALNTLIRGHSQEGSPDSAFE 424
Query: 477 LLESMKADDIDEDK 490
LL+ M +D +K
Sbjct: 425 LLKIMLRRKVDSEK 438
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 142/330 (43%), Gaps = 54/330 (16%)
Query: 116 KVRGLESAETYFNSL---NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
+V+ +E AE YF + N E V Y L+ YV VD++L L+++MK G +A
Sbjct: 197 RVKKMEEAEKYFVEMKGRNIEPTV-VTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNA 255
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP-DNFSYRICINSYGARSELSSMENVLQ 231
+ Y+ ++ N + + +L +M + + P DN + I+S+ L + +VL+
Sbjct: 256 ITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFLRLISSHCKSGNLDAAADVLK 315
Query: 232 EMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC--EDIVSKSKDAL-----GYNH 284
M S + + G Y + + AG +KA+ L K +DI+ + + L YN
Sbjct: 316 AMIRLS-VPTEAGHYGILIENFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNL 374
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSC 344
+I + + G Q K + T++ L+K+G
Sbjct: 375 MIEYLCNNG-----------QASKAE--------TLVRQLMKLG---------------- 399
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
D N ++ G+SQ+G + A +LK ++++ ++++ + Y KN A
Sbjct: 400 -VQDPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDA- 457
Query: 405 ECMKEALAVHEENKFWRPKPSLVSSILDWL 434
K AL EN P +L S+++ L
Sbjct: 458 ---KAALDSMIENDHL-PDSALFRSVMESL 483
>gi|356513139|ref|XP_003525271.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 621
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 163/378 (43%), Gaps = 53/378 (14%)
Query: 35 ARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEW 94
AR L + + G P + V EG K + + ++ L +KRFK
Sbjct: 62 ARTKLMNALIGKGKPHEA-QAVFHNLTEEGHKPTLITYTTLVAALTRQKRFK-------- 112
Query: 95 MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVD 154
S L V D+ ++ D I L A++N + G VD
Sbjct: 113 -SIPALLSKVADNGMKPDSI------------------------LLNAMINAFSDSGKVD 147
Query: 155 ESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQ-HEKIPDVLLDMKENGVPPDNFSYRIC 213
E++ + QKMKE G + YN ++ + G+ +E + + + ++ V P++ +Y I
Sbjct: 148 EAMKIFQKMKEYGCKPTTSTYNTLIKGFGIVGRPYESMKLLEMMGQDENVKPNDRTYNIL 207
Query: 214 INSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA-IIYLKKCEDI 272
I ++ + +L NVL +M + S I D TY+T+A Y G EKA + LK +
Sbjct: 208 IQAWCTKKKLEEAWNVLHKMVA-SGIQPDVVTYNTMARAYAQNGETEKAERLILKMQYNK 266
Query: 273 VSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVK------ 326
V ++ G +IS Y GN E ++F + K+ + SL+K
Sbjct: 267 VKPNERTCGI--IISGYCKEGNMTEALRFL----YRMKELGVHPNPVVFNSLIKGYLDAT 320
Query: 327 -IGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPN 385
++EA ++EE+ + F + I+ +S G+++ + + ++VK G P +
Sbjct: 321 DTNGVDEALTLMEEFGIKPDVVTF---STIMNAWSSAGLMDNCEEIFNDMVKAGIEPDIH 377
Query: 386 SWSIIAAGYADKNNMEKA 403
++SI+A GY KA
Sbjct: 378 AYSILAKGYVRAGQPRKA 395
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 161/352 (45%), Gaps = 28/352 (7%)
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
L+N + +G E+ ++ + E G + + Y ++ T + + IP +L + +NG
Sbjct: 66 LMNALIGKGKPHEAQAVFHNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNG 125
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
+ PD+ IN++ ++ + Q+M+ + TY+T+ + I G ++
Sbjct: 126 MKPDSILLNAMINAFSDSGKVDEAMKIFQKMK-EYGCKPTTSTYNTLIKGFGIVGRPYES 184
Query: 263 IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD---YIT 319
+ L+ + + YN LI + + K ++ + W + + D Y T
Sbjct: 185 MKLLEMMGQDENVKPNDRTYNILIQAWCT---KKKLEEAWNVLHKMVASGIQPDVVTYNT 241
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
M + + GE E+AE+++ + + + + R II+ GY ++G + +A L + + G
Sbjct: 242 MARAYAQNGETEKAERLILKMQYNKVKPNERTCGIIISGYCKEGNMTEALRFLYRMKELG 301
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLV--SSILD-W--- 433
P P ++ + GY D + + EAL + EE + KP +V S+I++ W
Sbjct: 302 VHPNPVVFNSLIKGYLDATDTNG----VDEALTLMEE---FGIKPDVVTFSTIMNAWSSA 354
Query: 434 -LGDNRDVEEVEAFVSSLKIKVQKR-NMYHALTEAHIRSGQ--EVDGLLESM 481
L DN + E F +K ++ + Y L + ++R+GQ + + LL SM
Sbjct: 355 GLMDNCE----EIFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAESLLTSM 402
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/258 (18%), Positives = 109/258 (42%), Gaps = 37/258 (14%)
Query: 137 DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
++ G +++ Y +EG + E+L + +MKE+G + + +N ++ Y + + + L
Sbjct: 271 ERTCGIIISGYCKEGNMTEALRFLYRMKELGVHPNPVVFNSLIKGYLDATDTNGVDEALT 330
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
M+E G+ PD ++ +N++ + + + E + +M ++ I D YS +A Y+ A
Sbjct: 331 LMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIFNDM-VKAGIEPDIHAYSILAKGYVRA 389
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
G KA L S SK + N +I
Sbjct: 390 GQPRKAESLL------TSMSKYGVQTNVVI------------------------------ 413
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
+ T++ G+++ A + E+ + + ++ GY + KA+ +L +
Sbjct: 414 FTTIISGWCAAGKMDRAFSLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEEILSTME 473
Query: 377 KKGKTPTPNSWSIIAAGY 394
++G P ++ ++A +
Sbjct: 474 ERGVVPEMSTMQLVADAW 491
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 60/129 (46%), Gaps = 1/129 (0%)
Query: 115 GKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALN 174
G+ R ES T + + V ++ +++ + G +D + SL +KM EMG+ +
Sbjct: 390 GQPRKAESLLTSMSKYGVQTNV-VIFTTIISGWCAAGKMDRAFSLCEKMHEMGTSPNLKT 448
Query: 175 YNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEME 234
Y ++ Y Q K ++L M+E GV P+ + ++ +++ A +L E
Sbjct: 449 YETLIWGYGEAKQPWKAEEILSTMEERGVVPEMSTMQLVADAWRAIGLFKEANRILNGSE 508
Query: 235 SQSHISMDW 243
+S + ++
Sbjct: 509 EESELDQEF 517
>gi|359481811|ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Vitis vinifera]
Length = 848
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/375 (22%), Positives = 162/375 (43%), Gaps = 25/375 (6%)
Query: 120 LESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNG 177
+E+ +T FN++ E + Y AL+ Y G+ E+ S+ ++K+ G ++Y
Sbjct: 355 IENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTS 414
Query: 178 IMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS 237
++ Y +G+ EK V M+ N P+ SY I++YG++ L+ +L EME ++
Sbjct: 415 LLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEME-RN 473
Query: 238 HISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDE 297
+ + + T+ G K K L E + + YN I Y S+G D+
Sbjct: 474 GVQPNIVSICTLLAACGRCGQKVKIKSVLSAAE-LRGIKLNTTAYNSAIGSYLSVGEYDK 532
Query: 298 MMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVP----- 352
+ + + K K Y ++ K+ + EA L+E D ++P
Sbjct: 533 ALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEM------MDLKIPLSKEV 586
Query: 353 -NIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
+ ++ YS++G + +A+++ ++ G P +++ + Y N EKA AL
Sbjct: 587 YSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKA-----SAL 641
Query: 412 AVHEENKFWRPKPSLVSSILDWL---GDNRDVEEVEAFVSSLKIKVQKRNMYHALTEAH- 467
+ E +P SS++ G V + F+ KI + + ++
Sbjct: 642 FLEMETDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFEMVSACSL 701
Query: 468 IRSGQEVDGLLESMK 482
+R +E+ GL++ M+
Sbjct: 702 LREWREIIGLIKLME 716
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 95/450 (21%), Positives = 195/450 (43%), Gaps = 33/450 (7%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHD--------H 107
+L++WV + S +IR++ +H++QV WM Q + +D H
Sbjct: 116 LLNRWV---GRFSRKNFPLLIREITQIGSLEHSVQVFRWMKNQKNYCARNDIYNMMIRLH 172
Query: 108 AVQLDLIGKVRGLESAETYFNSLNDEDKVD-KLYGALLNCYVREGLVDESLSLMQKMKEM 166
A + +++ + RGL +F K D + Y AL+N + R G ++++M M
Sbjct: 173 A-RHNIVDQARGL-----FFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRA 226
Query: 167 GSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSM 226
S YN ++ ++G ++ +V M ENGV PD ++ I +++Y ++ S +
Sbjct: 227 AIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKV 286
Query: 227 ENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS-KDALGYNHL 285
+ + M+ ++I D T + V + G KAI ++ S+ D + + +
Sbjct: 287 LSYFELMKG-TNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTI 345
Query: 286 ISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCY 345
I Y+ G + + + K Y ++G+ G +EA + E + + +
Sbjct: 346 IHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGF 405
Query: 346 CYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
D +L Y + G EKA V + + + P S++ + Y K + +A E
Sbjct: 406 HPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVE 465
Query: 406 CMKEALAVHEENKFWRPKPSLVS--SILDWLGDNRDVEEVEAFVSSLKIKVQKRNM--YH 461
+ E E N +P++VS ++L G ++++ +S+ +++ K N Y+
Sbjct: 466 ILHEM----ERNGV---QPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYN 518
Query: 462 ALTEAHIRSGQ--EVDGLLESMKADDIDED 489
+ +++ G+ + L +M+ + D
Sbjct: 519 SAIGSYLSVGEYDKALSLYRAMRTKKVKPD 548
>gi|255574497|ref|XP_002528160.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532417|gb|EEF34211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 569
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/428 (21%), Positives = 183/428 (42%), Gaps = 53/428 (12%)
Query: 71 ELQRVIRQLRSRKRFKHALQVSEW-MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNS 129
+L V+ QLR K++ L + +W + V + +D G+ + AET +
Sbjct: 114 DLINVVVQLRLNKKWDLILLICQWILYRSSFQSDVMIFNLVIDAYGRKSLYKMAETTYFE 173
Query: 130 LNDEDKV--DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQ 187
L + + + Y LL Y GL++++ ++ +M++ G SA+ YN + G
Sbjct: 174 LIEARCIPTEDTYALLLKAYCTSGLLEKAEAIFAEMRKYGLPPSAIVYNAYIDGLMKAGN 233
Query: 188 HEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYS 247
++ ++ MK + P +Y + IN +G S+ + EM SQ + TY+
Sbjct: 234 PQRAVEIFQRMKRDCCQPSTETYTLLINLHGKASQSYMALKLFNEMRSQK-CKPNICTYT 292
Query: 248 TVANYYIIAGLKEKA-IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGL-Q 305
+ N + GL EKA I+ + ED D YN L+ Y+ G + + L Q
Sbjct: 293 ALVNAFAREGLCEKAEEIFEQLQED--GHEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQ 350
Query: 306 KIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMI 365
+ C+ D NI++ Y + G+
Sbjct: 351 HMGCEP------------------------------------DRASYNIMVDAYGRGGLH 374
Query: 366 EKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPS 425
E A AV +E+ + G TPT S ++ + Y+ ++ K + + E +HE P
Sbjct: 375 EDAQAVFEEMKRLGITPTMKSHMLLLSAYSKAGDVAKCEDIVNE---LHESG--LEPDTF 429
Query: 426 LVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNM--YHALTEAHIRSG--QEVDGLLESM 481
+++S+L+ G ++E +++++ ++ Y+ L + R+G ++++GL +S+
Sbjct: 430 VLNSMLNLYGRLGQFGKMEEVLTAMESGPYATDISTYNILINIYGRAGFFEKMEGLFQSL 489
Query: 482 KADDIDED 489
A ++ D
Sbjct: 490 AAKNLKPD 497
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 132/334 (39%), Gaps = 51/334 (15%)
Query: 86 KHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGAL 143
+ A+++ + M S + + ++L GK A FN + + + Y AL
Sbjct: 235 QRAVEIFQRMKRDCCQPSTETYTLLINLHGKASQSYMALKLFNEMRSQKCKPNICTYTAL 294
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
+N + REGL +++ + ++++E G YN +M Y+ G ++ M+ G
Sbjct: 295 VNAFAREGLCEKAEEIFEQLQEDGHEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGC 354
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAI 263
PD SY I +++YG + V +EM+ G T+ ++ ++ KA
Sbjct: 355 EPDRASYNIMVDAYGRGGLHEDAQAVFEEMKR-------LGITPTMKSHMLLLSAYSKAG 407
Query: 264 IYLKKCEDIVSK------SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
+ KCEDIV++ D N +++ Y LG
Sbjct: 408 D-VAKCEDIVNELHESGLEPDTFVLNSMLNLYGRLG------------------------ 442
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
+ G++EE +L E Y D NI++ Y + G EK + + + +
Sbjct: 443 --------QFGKMEE---VLTAMESGPYATDISTYNILINIYGRAGFFEKMEGLFQSLAA 491
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
K P +W+ Y+ K K E +E +
Sbjct: 492 KNLKPDVVTWTSRLGAYSRKKLYTKCLEIFEEMI 525
>gi|255660890|gb|ACU25614.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 484
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/422 (21%), Positives = 183/422 (43%), Gaps = 31/422 (7%)
Query: 79 LRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAETYFNSLN------ 131
L S K +HALQ W+ L + H ++++G+ L A +
Sbjct: 19 LHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEW 78
Query: 132 DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
DED ++ +++ Y ++G+V ES+ + QKM+E+G + +YN + + G++
Sbjct: 79 DED----MWVMMIDSYGKQGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMA 134
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
M G+ P ++ + I + ++ + ++M+S+ IS D TY+T+ N
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR-EISPDVVTYNTMIN 193
Query: 252 -YYIIAGLKEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
YY + ++E +++ K +I + Y LI Y S+ D+ ++ K
Sbjct: 194 GYYRVKKMEEAEKYFVEMKGRNI---EPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFG 250
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYC--YDFRVPNIILLGYSQKGMIEK 367
K Y T+L L ++ EA +L+E + Y D + ++ + + G ++
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARVILKEM-MDKYLAPTDNSIFMRLISSHCKSGNLDA 309
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPK---- 423
A VLK +V+ + ++ + +KA + + + + E++ RP+
Sbjct: 310 AADVLKAMVRLSVPTEAGHYGVLIENFCKAGQYDKAVKLLDKLI---EKDIILRPQSTLH 366
Query: 424 --PSLVSSILDWLGDNRDVEEVEAFVSS-LKIKVQKRNMYHALTEAHIRSGQEVDGLLES 480
PS + ++++L +N + E V LK+ VQ + L H + G D E
Sbjct: 367 LEPSAYNPMIEYLCNNGQAAKAETLVRQLLKLGVQDPTALNTLIRGHSQEGSP-DSXFEL 425
Query: 481 MK 482
+K
Sbjct: 426 LK 427
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 141/330 (42%), Gaps = 54/330 (16%)
Query: 116 KVRGLESAETYFNSL---NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
+V+ +E AE YF + N E V Y L+ YV VD++L L+++MK G +A
Sbjct: 197 RVKKMEEAEKYFVEMKGRNIEPTV-VTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNA 255
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP-DNFSYRICINSYGARSELSSMENVLQ 231
+ Y+ ++ N + + +L +M + + P DN + I+S+ L + +VL+
Sbjct: 256 ITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLK 315
Query: 232 EMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC--EDIVSKSKDAL-----GYNH 284
M S + + G Y + + AG +KA+ L K +DI+ + + L YN
Sbjct: 316 AMVRLS-VPTEAGHYGVLIENFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNP 374
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSC 344
+I + + G Q K + T++ L+K+G
Sbjct: 375 MIEYLCNNG-----------QAAKAE--------TLVRQLLKLG---------------- 399
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
D N ++ G+SQ+G + +LK ++++ ++++ + Y KN A
Sbjct: 400 -VQDPTALNTLIRGHSQEGSPDSXFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPADA- 457
Query: 405 ECMKEALAVHEENKFWRPKPSLVSSILDWL 434
K AL EN P SL S+++ L
Sbjct: 458 ---KAALDSMIENDHL-PDSSLFRSVMESL 483
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 146/319 (45%), Gaps = 27/319 (8%)
Query: 100 LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED-KVDKLYGA-LLNCYVREGLVDESL 157
L+ + + +A+ +D + E A +F L +VD + + LL + DE+L
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168
Query: 158 S-LMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV--PPDNFSYRICI 214
L+ + E+G +YN ++ N G+ + D+L M E G PD +Y I
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVI 228
Query: 215 NSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVS 274
+ + +++ ++ +EM Q I D TYS+V + A +KA +L++ +V+
Sbjct: 229 DGFFKEGDVNKACDLFKEM-VQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQ---MVN 284
Query: 275 KS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI--------TMLGSL 324
K D YN+LI Y+S G E ++ + K++ R I T++GSL
Sbjct: 285 KGVLPDNWTYNNLIYGYSSTGQWKEAVRVF--------KEMRRQSILPDVVALNTLMGSL 336
Query: 325 VKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTP 384
K G+++EA + + + D I+L GY+ KG + + ++ G P
Sbjct: 337 CKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDI 396
Query: 385 NSWSIIAAGYADKNNMEKA 403
+++++ YA+ ++KA
Sbjct: 397 YTFNVLIKAYANCGMLDKA 415
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/388 (18%), Positives = 154/388 (39%), Gaps = 19/388 (4%)
Query: 70 LELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNS 129
+ L ++ L + K A V + M+ +G V + + L+ L F+
Sbjct: 327 VALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDL 386
Query: 130 LNDEDKVDKLY--GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQ 187
+ + +Y L+ Y G++D+++ + +M++ G + Y ++ G+
Sbjct: 387 MLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGK 446
Query: 188 HEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYS 247
+ + M + GV PD ++Y I + L + ++ E+ + + +D +
Sbjct: 447 MDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNG-MRLDIVFFG 505
Query: 248 TVANYYIIAGLKEKAIIYLKKCEDI---VSKSKDALGYNHLISHYASLGNKDEMMKFWGL 304
++ N G A + D+ V DA+ YN L+ Y +G ++ ++ +
Sbjct: 506 SIINNLCKLGRVMDA----QNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDA 561
Query: 305 QKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGM 364
+ Y T++ KIG ++E + E + NII+ G + G
Sbjct: 562 MVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGR 621
Query: 365 IEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKP 424
A E+ + G ++SI+ G KN C EA+ + +E + K
Sbjct: 622 TVPAKVKFHEMTESGIAMNKCTYSIVLRGLF-KN------RCFDEAIFLFKELRAMNVKI 674
Query: 425 SLVS--SILDWLGDNRDVEEVEAFVSSL 450
+++ +++ + R VEE + +S+
Sbjct: 675 DIITLNTMIAGMFQTRRVEEAKDLFASI 702
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/277 (19%), Positives = 110/277 (39%), Gaps = 41/277 (14%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +++ + +EG V+++ L ++M + G + Y+ ++ +K L M
Sbjct: 224 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMV 283
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHI-------------------- 239
GV PDN++Y I Y + + V +EM QS +
Sbjct: 284 NKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIK 343
Query: 240 --------------SMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIV---SKSKDALGY 282
+ D +Y+ + N Y G ++ + D++ + D +
Sbjct: 344 EARDVFDTMAMKGQNPDVFSYTIMLNGYATKG----CLVDMTDLFDLMLGDGIAPDIYTF 399
Query: 283 NHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWEL 342
N LI YA+ G D+ M + + K Y+T++ +L +IG++++A + +
Sbjct: 400 NVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMID 459
Query: 343 SCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
D + ++ G+ G + KA ++ EI+ G
Sbjct: 460 QGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNG 496
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 80/442 (18%), Positives = 166/442 (37%), Gaps = 52/442 (11%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
V D ++GQ ++ ++ + + M G G+A ++ V +
Sbjct: 348 VFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYA 407
Query: 116 KVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
L+ A FN + D + Y ++ R G +D+++ +M + G
Sbjct: 408 NCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKY 467
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
Y+ ++ + G K +++ ++ NG+ D + IN+ + +N+ ++
Sbjct: 468 AYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIF-DL 526
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYAS 291
+ D Y+ + + Y + G EKA L+ + +VS + +GY L++ Y
Sbjct: 527 TVNVGLHPDAVVYNMLMDGYCLVGKMEKA---LRVFDAMVSAGIEPNVVGYGTLVNGYCK 583
Query: 292 LGNKDEMMKFWG--LQK----------------------IKCKKQLNR-----------D 316
+G DE + + LQK + K + +
Sbjct: 584 IGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCT 643
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y +L L K +EA + +E D N ++ G Q +E+A + I
Sbjct: 644 YSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASIS 703
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGD 436
+ G P ++SI+ + +E+A E + +N P L++ ++ L
Sbjct: 704 RSGLVPCAVTYSIMITNLLKEGLVEEA-----EDMFSSMQNAGCEPDSRLLNHVVRELLK 758
Query: 437 NRDVEEVEAFVSSLKIKVQKRN 458
++ A++S K+ +RN
Sbjct: 759 KNEIVRAGAYLS----KIDERN 776
>gi|255660864|gb|ACU25601.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 484
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 96/434 (22%), Positives = 185/434 (42%), Gaps = 36/434 (8%)
Query: 79 LRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAETYFNSLN------ 131
L S K +HALQ W+ L + H ++++G+ L A +
Sbjct: 19 LHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEW 78
Query: 132 DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
DED ++ +++ Y +EG+V ES+ + QKM+E+G + +YN + + G++
Sbjct: 79 DED----MWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMA 134
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
M G+ P ++ + I + ++ + ++M+S+ IS D TY+T+ N
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR-EISPDVVTYNTMIN 193
Query: 252 -YYIIAGLKEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
YY + ++E +++ K +I + Y LI Y S+ D+ ++ K
Sbjct: 194 GYYRVKKMEEAEKYFVEMKGRNI---EPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFG 250
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL----GYSQKGMI 365
K Y T+L L ++ EA +L+E Y N I L + + G +
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARVILKEM---MDKYLAPTDNSIFLRLISSHCKSGNL 307
Query: 366 EKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPK-- 423
+ A VLK +++ + ++ + +KA + + + + E++ RP+
Sbjct: 308 DAAVDVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKAVKLLDKLI---EKDIILRPQST 364
Query: 424 ----PSLVSSILDWLGDNRDVEEVEAFVSSL-KIKVQKRNMYHALTEAHIRSGQEVDG-- 476
PS + ++++L +N + E V L K+ VQ + L H + G
Sbjct: 365 LHLEPSAYNPMIEYLCNNGQASKAETLVRQLMKLGVQDPTALNTLIRGHSQEGSPDSAFE 424
Query: 477 LLESMKADDIDEDK 490
LL+ M +D +K
Sbjct: 425 LLKIMLRRKVDSEK 438
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 84/392 (21%), Positives = 165/392 (42%), Gaps = 34/392 (8%)
Query: 65 QKISELELQRVIRQLRS-------RKRFKHALQVSEWMSGQGLAFSVHDHAVQL---DLI 114
QK+ EL ++R I+ + R R+ A + M +G+ + H V + L
Sbjct: 104 QKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLS 163
Query: 115 GKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
GKV E+A +F + + + Y ++N Y R ++E+ +MK +
Sbjct: 164 GKV---ETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTV 220
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQE 232
+ Y ++ Y + Q + ++ +MK G+ P+ +Y + ++S +L+E
Sbjct: 221 VTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKE 280
Query: 233 MESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASL 292
M + D + + + + +G + A+ LK + S +A Y LI ++
Sbjct: 281 MMDKYLAPTDNSIFLRLISSHCKSGNLDAAVDVLKAMIRL-SVPTEAGHYGLLIENFCKA 339
Query: 293 GNKDEMMKFWGLQKIKCKKQLNRD----------YITMLGSLVKIGELEEAEKMLEEWEL 342
G D+ +K L K+ K + R Y M+ L G+ +AE ++ + +
Sbjct: 340 GQYDKAVKL--LDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQASKAETLVRQL-M 396
Query: 343 SCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEK 402
D N ++ G+SQ+G + A +LK ++++ ++++ + Y KN
Sbjct: 397 KLGVQDPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPAD 456
Query: 403 AFECMKEALAVHEENKFWRPKPSLVSSILDWL 434
A K AL EN P +L S+++ L
Sbjct: 457 A----KAALDSMIENDHL-PDSALFRSVMESL 483
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/400 (20%), Positives = 174/400 (43%), Gaps = 44/400 (11%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLN 145
A V + +S G+ +V+ + ++ + K +E T+ + + ++ + Y L++
Sbjct: 219 AWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLIS 278
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
Y +GL++E+ LM M G YN ++ G++E+ +V +M +G+ P
Sbjct: 279 AYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSP 338
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
D+ +YR + + ++ E V +M S+ + D +S++ + + +G +KA++Y
Sbjct: 339 DSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVP-DLVCFSSMMSLFTRSGNLDKALMY 397
Query: 266 LKKCEDIVSKSKDALGYNHLISHYASLGN-------KDEMMK-------------FWGLQ 305
++ D + Y LI Y G ++EM++ GL
Sbjct: 398 FNSVKE-AGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLC 456
Query: 306 KIK------------CKKQLNRDYIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFR 350
K K ++ L D T ++ K+G L+ A ++ ++ + D
Sbjct: 457 KRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVV 516
Query: 351 VPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEA 410
N +L G+ + G I+ A + ++V K PTP S+SI+ K ++ +AF E
Sbjct: 517 TYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEM 576
Query: 411 LAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL 450
++ K +P + +S++ + + + E+F+ +
Sbjct: 577 IS-----KNIKPTVMICNSMIKGYCRSGNASDGESFLEKM 611
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 86/412 (20%), Positives = 166/412 (40%), Gaps = 40/412 (9%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSL--ND 132
+I S+ + A ++ M G+G + V+ + ++ + K E A+ F + +
Sbjct: 276 LISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 335
Query: 133 EDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
Y +LL ++G V E+ + M+ + ++ +M L+T +G +K
Sbjct: 336 LSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKAL 395
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
+KE G+ PDN Y I I Y + +S N+ EM Q +MD TY+T+ +
Sbjct: 396 MYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQG-CAMDVVTYNTILHG 454
Query: 253 Y-----------IIAGLKEKAII-----------------YLKKCEDIVSKSK------D 278
+ + E+A+ L+ ++ K K D
Sbjct: 455 LCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLD 514
Query: 279 ALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLE 338
+ YN L+ + +G+ D + W K Y ++ +L G L EA ++ +
Sbjct: 515 VVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWD 574
Query: 339 EWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKN 398
E + N ++ GY + G ++ L++++ +G P S++ + G+ +
Sbjct: 575 EMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREE 634
Query: 399 NMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL 450
NM KAF +K+ + EE P +SIL ++E E + +
Sbjct: 635 NMSKAFGLVKK---MEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKM 683
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 67/334 (20%), Positives = 133/334 (39%), Gaps = 40/334 (11%)
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
AL+ VR G V+ + + Q++ G + N ++ G+ EK+ L ++E
Sbjct: 205 ALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEK 264
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
GV PD +Y I++Y ++ + ++ M + S TY+TV N G E+
Sbjct: 265 GVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKG-FSPGVYTYNTVINGLCKHGKYER 323
Query: 262 A--------------------IIYLKKCE--DIVSKSK------------DALGYNHLIS 287
A + ++ C+ D+V K D + ++ ++S
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMS 383
Query: 288 HYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCY 347
+ GN D+ + ++ K N Y ++ + G + A + E
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM 443
Query: 348 DFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECM 407
D N IL G ++ M+ +AD + E+ ++ P + +I+ G+ N++ A E
Sbjct: 444 DVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELF 503
Query: 408 KEALAVHEENKFWRPKPSLVSSILDWLGDNRDVE 441
++ + K R +++LD G D++
Sbjct: 504 QKM-----KEKRIRLDVVTYNTLLDGFGKVGDID 532
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 56/289 (19%), Positives = 120/289 (41%), Gaps = 22/289 (7%)
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD--MK 199
A+++ VR G + ++ S + +M N + ++N G ++ + D+L+ ++
Sbjct: 118 AMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQ 177
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVA------NYY 253
+ + ++ + + S G + + ++ + + + WG Y ++ N Y
Sbjct: 178 ARKLREAHEAFTL-LRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVY 236
Query: 254 IIA---------GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGL 304
+ G EK +L + ++ D + YN LIS Y+S G +E +
Sbjct: 237 TLNIMVNALCKDGKMEKVGTFLSQVQE-KGVYPDIVTYNTLISAYSSKGLMEEAFELMNA 295
Query: 305 QKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGM 364
K Y T++ L K G+ E A+++ E S D +L+ +KG
Sbjct: 296 MPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGD 355
Query: 365 IEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA---FECMKEA 410
+ + + V ++ + P +S + + + N++KA F +KEA
Sbjct: 356 VVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA 404
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKE--MGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
Y L+ +VRE + ++ L++KM+E G YN I+ + Q ++ VL
Sbjct: 623 YNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRK 682
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
M E GV PD +Y IN + ++ L+ + EM
Sbjct: 683 MIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEM 718
>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
Length = 631
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 154/359 (42%), Gaps = 44/359 (12%)
Query: 118 RGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNG 177
R E+ + + +++ E D LL + ++E+L+L Q+ ++ G Y+
Sbjct: 281 RLAEATQLFESTMTKESVPDVFTYNLLIALCKSKQLEEALTLFQEAEQGGVVLDVFTYSY 340
Query: 178 IMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS 237
+M + G+ K +V +M++ G PD Y + I+ G + ++ +L++M +
Sbjct: 341 LMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKG 400
Query: 238 HISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDE 297
I D TY+ V + G EKA + + S D + YN L++ L DE
Sbjct: 401 -IMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKR-RKHSPDVVTYNTLLNGLKKLRRTDE 458
Query: 298 MMKFWG-LQKIKCKKQLNRDYITMLGSLVKIGELEEA----------------------- 333
+ +Q KC L + T++ +L K G +E+A
Sbjct: 459 ACDLFDEMQANKCMPDLT-TFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALI 517
Query: 334 ---------EKMLEEWE--LSCYCY-DFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKT 381
+K E ++ + C C+ D I++LG+S++G A +L+E+V++G T
Sbjct: 518 SGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHT 577
Query: 382 PTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDV 440
P +++++ + +E A+ KE +A K + P S++ + N+ V
Sbjct: 578 PALATYNVLIRSLSMAGQVEDAYTLFKEMIA-----KGFNPDMQTYSALPNLSTPNKSV 631
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 159/409 (38%), Gaps = 40/409 (9%)
Query: 34 VARNNLYSRISPLGDPDVSLTPVLDQWVLEGQ-KISELELQRVIRQLRSRKRFKHALQVS 92
VA N L + GD D +L + + EG K + + ++ L R AL V
Sbjct: 126 VAYNTLIAGYCKAGDGDRAL-DMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVF 184
Query: 93 EWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDK--LYGALLNCYVRE 150
+ M G GL V+ + ++ L A + + YG L+N + R
Sbjct: 185 QEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRA 244
Query: 151 GLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSY 210
G + E S M+ + G SA+NYN I+ + G+ + + PD F+Y
Sbjct: 245 GQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTY 304
Query: 211 RICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA-------- 262
+ I + +L + QE E Q + +D TYS + + + AG KA
Sbjct: 305 NLLI-ALCKSKQLEEALTLFQEAE-QGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQ 362
Query: 263 --------IIY--LKKC--------------EDIVSKS--KDALGYNHLISHYASLGNKD 296
++Y L C ED+ K D YN +I +S G +
Sbjct: 363 KAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYE 422
Query: 297 EMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIIL 356
+ F+G+ K + Y T+L L K+ +EA + +E + + D ++
Sbjct: 423 KAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLI 482
Query: 357 LGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
++ G +E A +VK G P ++ + +G+ ++K +E
Sbjct: 483 DTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYE 531
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 101/222 (45%), Gaps = 11/222 (4%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
VI L S R++ A M + + V + L+ + K+R + A F+ +
Sbjct: 411 VIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANK 470
Query: 135 KVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+ L +G L++ + G ++++L ++ +MG ++ YN ++ + +GQ +K
Sbjct: 471 CMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGY 530
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
++ DM E PD+ +Y I + + R S +LQEM + H TY+ +
Sbjct: 531 ELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPA-LATYNVLIRS 589
Query: 253 YIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGN 294
+AG E A K ++++K G+N + Y++L N
Sbjct: 590 LSMAGQVEDAYTLFK---EMIAK-----GFNPDMQTYSALPN 623
>gi|255660898|gb|ACU25618.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 484
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 93/432 (21%), Positives = 186/432 (43%), Gaps = 32/432 (7%)
Query: 79 LRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAETYFNSLN------ 131
L S K +HALQ W+ L + H ++++G+ L A +
Sbjct: 19 LHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEW 78
Query: 132 DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
DED ++ +++ Y +ZG+V ES+ + QKM+E+G + +YN + + G++
Sbjct: 79 DED----MWVMMIDSYGKZGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMA 134
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
M G+ P ++ + I + ++ + ++M+S+ IS D TY+T+ N
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR-EISPDVVTYNTMIN 193
Query: 252 -YYIIAGLKEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
YY + ++E +++ K +I + Y LI Y S+ D+ ++ K
Sbjct: 194 GYYRVKKMEEAEKYFVEMKGRNI---EPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFG 250
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYC--YDFRVPNIILLGYSQKGMIEK 367
K Y T+L L ++ EA +L+E + Y D + ++ + + G ++
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARVILKEM-MDKYLAPTDNSIFMRLISSHCKSGNLDA 309
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPK---- 423
A VLK + + + ++ + +KA + + + + E++ RP+
Sbjct: 310 AADVLKAMXRLSVPTEAGHYGVLIENFCKXGQYDKAVKLLDKLI---EKDIILRPQSTLH 366
Query: 424 --PSLVSSILDWLGDNRDVEEVEAFVSS-LKIKVQKRNMYHALTEAHIRSGQEVDG--LL 478
PS + ++++L +N + E V LK+ VQ + L H + G LL
Sbjct: 367 LEPSAYNPMIEYLCNNGQAAKAETLVRQLLKLGVQDPTALNTLIRGHSQEGSPDSAFELL 426
Query: 479 ESMKADDIDEDK 490
+ M +D +K
Sbjct: 427 KIMLRRKVDSEK 438
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 141/330 (42%), Gaps = 54/330 (16%)
Query: 116 KVRGLESAETYFNSL---NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
+V+ +E AE YF + N E V Y L+ YV VD++L L+++MK G +A
Sbjct: 197 RVKKMEEAEKYFVEMKGRNIEPTV-VTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNA 255
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP-DNFSYRICINSYGARSELSSMENVLQ 231
+ Y+ ++ N + + +L +M + + P DN + I+S+ L + +VL+
Sbjct: 256 ITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLK 315
Query: 232 EMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC--EDIVSKSKDAL-----GYNH 284
M S + + G Y + + G +KA+ L K +DI+ + + L YN
Sbjct: 316 AMXRLS-VPTEAGHYGVLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNP 374
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSC 344
+I + + G Q K + T++ L+K+G
Sbjct: 375 MIEYLCNNG-----------QAAKAE--------TLVRQLLKLG---------------- 399
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
D N ++ G+SQ+G + A +LK ++++ ++++ + Y KN A
Sbjct: 400 -VQDPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDA- 457
Query: 405 ECMKEALAVHEENKFWRPKPSLVSSILDWL 434
K AL EN P SL S+++ L
Sbjct: 458 ---KAALDSMIENDHL-PDSSLFRSVMESL 483
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 164/351 (46%), Gaps = 22/351 (6%)
Query: 70 LELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNS 129
++ R+ + K++ L + + M +G+A +++ ++ ++ + R L A F++
Sbjct: 187 IDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLA---FSA 243
Query: 130 LNDEDKVDKL--------YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCL 181
+ K+ KL + L+N EG V E+L L+ +M EMG + N ++
Sbjct: 244 MG---KIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNG 300
Query: 182 YTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISM 241
+G+ + ++ M E G P+ +Y +N + + +L++ME + +I +
Sbjct: 301 LCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKME-ERNIKL 359
Query: 242 DWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKF 301
D YS + + G + A + E + + + + YN LI + + G D+ K
Sbjct: 360 DAVKYSIIIDGLCKHGSLDNAFNLFNEME-MKGITTNIITYNILIGGFCNAGRWDDGAK- 417
Query: 302 WGLQKIKCKKQLNRDYIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLG 358
L + K+++N + +T ++ S VK G+L EAE++ +E D ++ G
Sbjct: 418 --LLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDG 475
Query: 359 YSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
+ ++ ++KA+ ++ +V KG P +++I+ GY N ++ E ++
Sbjct: 476 FCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRK 526
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 123/268 (45%), Gaps = 6/268 (2%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +++ + G +D + +L +M+ G + + YN ++ + N G+ + +L DM
Sbjct: 364 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 423
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ + P+ ++ + I+S+ +L E + +EM + I+ D TY+++ + +
Sbjct: 424 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG-IAPDTITYTSLIDGFCKENHL 482
Query: 260 EKAIIYLKKCEDIVSKSKDA--LGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
+KA + + +VSK D +N LI+ Y D+ ++ + ++ Y
Sbjct: 483 DKAN---QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTY 539
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
T++ ++G+L A+++ +E + I+L G G EKA + ++I K
Sbjct: 540 NTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 599
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAFE 405
++II G + + ++ A++
Sbjct: 600 SKMELDIGIYNIIIHGMCNASKVDDAWD 627
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 139/348 (39%), Gaps = 50/348 (14%)
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE--DKVDKLYG 141
+ + A ++ + M +G+A + +D K L+ A + + + D + +
Sbjct: 446 KLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFN 505
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
L+N Y + +D+ L L +KM G + YN ++ + G+ ++ +M
Sbjct: 506 ILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR 565
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
VPP+ +Y+I ++ E + +++E +S + +D G Y+ II G+
Sbjct: 566 KVPPNIVTYKILLDGLCDNGESEKALEIFEKIE-KSKMELDIGIYNI-----IIHGM--- 616
Query: 262 AIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITML 321
C SK DA + SL +K K + Y M+
Sbjct: 617 -------CN--ASKVDDAWDL------FCSL-------------PLKGVKPGVKTYNIMI 648
Query: 322 GSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKT 381
G L K G L EAE + + E + D NI++ + G K+ +++E+ + G +
Sbjct: 649 GGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFS 708
Query: 382 PTPNSWSIIAAGYAD--KNNMEKAFECMKEALAVHEENKFW-RP-KPS 425
++ ++ +D N K C K FW +P KPS
Sbjct: 709 VDASTIKMVIDMLSDDKANYFSKYHNCSKST-------SFWNQPEKPS 749
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 95/453 (20%), Positives = 183/453 (40%), Gaps = 22/453 (4%)
Query: 29 RAVKP--VARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFK 86
R V P V N L GD D ++ ++D G K + V++ L +RF
Sbjct: 186 RCVFPDVVTHNVLIDARFRAGDVDAAIA-LVDSMANRGLKPGIVTYNSVLKGLCKHRRFD 244
Query: 87 HALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALL 144
A +V M +A V + + +V ++ A ++ + + + L+
Sbjct: 245 KAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLI 304
Query: 145 NCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVP 204
+ R G +D + + +++MK +G + Y ++ + G + V +M G
Sbjct: 305 GLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCL 364
Query: 205 PDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAII 264
PD +Y +N + L E +L EME + ++ D T++T+ + Y G E A+
Sbjct: 365 PDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERG-VTPDLCTFTTLIHGYCRQGNFENALQ 423
Query: 265 YLKKCEDIVSKSK---DALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITML 321
D + + + D + YN LI G+ + + W + + Y ++
Sbjct: 424 LF----DTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILI 479
Query: 322 GSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKT 381
S + G++E+A L+E + R N I+ GY + G ++K L+++ +
Sbjct: 480 DSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVF 539
Query: 382 PTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWL---GDNR 438
P +++ + GY + NM AF E + RP + I++ G+ +
Sbjct: 540 PDLITFNTLIHGYIKEENMHGAFNVFNIM-----EKEMVRPDAVTYNMIINGFSEQGNMQ 594
Query: 439 DVEEVEAFVSSLKIKVQKRNMYHALTEAHIRSG 471
D V + I+ R Y +L H+ +G
Sbjct: 595 DAGRVFKGMGDSGIE-PDRYTYMSLINGHVTAG 626
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 133/327 (40%), Gaps = 41/327 (12%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLN 145
AL+V + M G G V + L+ + K L AE N + + L + L++
Sbjct: 351 ALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIH 410
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
Y R+G + +L L + + YN ++ G K ++ DM + P
Sbjct: 411 GYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILP 470
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
++ +Y I I+S+ + ++ L EM + ++ + TY+++ Y +G +K +
Sbjct: 471 NHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLP-NIRTYNSIIKGYCRSGNVKKGQQF 529
Query: 266 LKKC-EDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSL 324
L+K +D V D + +N LI Y ++ M + + I K+ + D +T
Sbjct: 530 LQKMRQDNVFP--DLITFNTLIHGYI---KEENMHGAFNVFNIMEKEMVRPDAVTY---- 580
Query: 325 VKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTP 384
N+I+ G+S++G ++ A V K + G P
Sbjct: 581 ----------------------------NMIINGFSEQGNMQDAGRVFKGMGDSGIEPDR 612
Query: 385 NSWSIIAAGYADKNNMEKAFECMKEAL 411
++ + G+ N ++AF+ E +
Sbjct: 613 YTYMSLINGHVTAGNSKQAFQLHDEMI 639
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 95/211 (45%), Gaps = 14/211 (6%)
Query: 208 FSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLK 267
++ I ++SY E + V+ EME + + D T++ + + AG + AI +
Sbjct: 158 YTLNIMVHSYCKTLEFDGADTVISEMEKRC-VFPDVVTHNVLIDARFRAGDVDAAIALVD 216
Query: 268 KCEDIVSKSKDALGYNHLISHYASLGNKDEMMK-FWGLQKIKCKKQLNRDYITMLGSLVK 326
+ K + YN ++ D+ + F + + + R + ++G +
Sbjct: 217 SMANRGLKP-GIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDV-RSFNILIGGFCR 274
Query: 327 IGELEEAEKMLEEWELSCYCYDFRVPNII----LLG-YSQKGMIEKADAVLKEIVKKGKT 381
+GE++EA K +E + + + P+++ L+G +S++G ++ A A L+E+ G
Sbjct: 275 VGEVKEAVKFYKEMQ-----HRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLV 329
Query: 382 PTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
P ++++ G+ +M +A E +
Sbjct: 330 PDGVIYTMVIGGFCRAGSMSEALRVRDEMVG 360
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 126/279 (45%), Gaps = 20/279 (7%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ L++ +EG V+++ +M+ M E G + Y+ IM Y GQ ++ V ++
Sbjct: 276 FSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLR 335
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ G+ P+ FSY I IN Y + L+ + E+ SQ + D TYST+ + I G
Sbjct: 336 DKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEI-SQKGLKPDTVTYSTILHGLIEVGRI 394
Query: 260 EKAIIYLKKCED---IVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
A KK D V + D ++ L+ Y G +E M + K + NR+
Sbjct: 395 GDA----KKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFS------KLERNRE 444
Query: 317 ------YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADA 370
Y ++ L K + EA + E+ D R N+++ G+ ++G+ ++
Sbjct: 445 DTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKG 504
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
+L+++ G ++++I G+ N + + MKE
Sbjct: 505 ILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKE 543
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 124/266 (46%), Gaps = 2/266 (0%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
+ Y +++ ++ +D +++L+ +MK+ + YN ++ GQ EK+ +L +
Sbjct: 204 RTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSE 263
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
M + P+ ++ I I+ ++ + V++ M + + D TYS + + Y + G
Sbjct: 264 MVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKG-VEPDIITYSAIMDGYCLRG 322
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
++A D K + Y+ LI+ Y N + M+ +G K K Y
Sbjct: 323 QVDRARRVFNVLRDKGIKP-NIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTY 381
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
T+L L+++G + +A+K+ +E D + + +L GY + G++E+A + ++ +
Sbjct: 382 STILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLER 441
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKA 403
+ + ++++ G + + +A
Sbjct: 442 NREDTNISFYTVVINGLCKNDRVREA 467
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/308 (19%), Positives = 127/308 (41%), Gaps = 6/308 (1%)
Query: 153 VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
+D+++SL +M M S ++++ + N + + + +M+ G+P + I
Sbjct: 43 LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102
Query: 213 CINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDI 272
NSY R + +VL + ++ I + T++T+ A++ KK
Sbjct: 103 VTNSYCLRHRIDCAFSVL-PIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVRE 161
Query: 273 VSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEE 332
+ + Y +++ + G+ ++ + + + K R Y ++ +L K L+
Sbjct: 162 KICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDA 221
Query: 333 AEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAA 392
A +L E + + N ++ G + G EK +L E+V P +++SI+
Sbjct: 222 AINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILID 281
Query: 393 GYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKI 452
G + +E A E M+ H K P S+I+D V+ + L+
Sbjct: 282 GLCKEGKVEDADEVMR-----HMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRD 336
Query: 453 KVQKRNMY 460
K K N++
Sbjct: 337 KGIKPNIF 344
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 83/191 (43%), Gaps = 3/191 (1%)
Query: 63 EGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLES 122
+G K + ++ L R A ++ + M G + H+ L K +E
Sbjct: 372 KGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEE 431
Query: 123 AETYFNSL--NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMC 180
A F+ L N ED Y ++N + V E+ ++ +K+ +G YN ++
Sbjct: 432 AMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMIT 491
Query: 181 LYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHIS 240
+ G +++ +L M++NG P +N +Y + + + +++S + + ++EM + S
Sbjct: 492 GFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRG-FS 550
Query: 241 MDWGTYSTVAN 251
D T + N
Sbjct: 551 FDATTTGVLIN 561
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 70/353 (19%), Positives = 141/353 (39%), Gaps = 40/353 (11%)
Query: 64 GQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESA 123
G IS+ L V R R A V G+ F+V L + + A
Sbjct: 92 GIPISDSILNIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDA 151
Query: 124 ETYFNSLNDEDKVDK---LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMC 180
F L E + +YG ++N + G +++LSL++ M++ + Y+ ++
Sbjct: 152 VVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVID 211
Query: 181 LYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHIS 240
+ ++L +MK+ +PP+ F+Y I+ + ++ +L EM + +I+
Sbjct: 212 ALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNL-NIN 270
Query: 241 MDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMK 300
+ T+S +I GL C++ K +DA + ++ H G + +++
Sbjct: 271 PNVHTFSI-----LIDGL----------CKE--GKVEDA---DEVMRHMIEKGVEPDIIT 310
Query: 301 FWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYS 360
+ + C + G+++ A ++ + +I++ GY
Sbjct: 311 YSAIMDGYCLR----------------GQVDRARRVFNVLRDKGIKPNIFSYSILINGYC 354
Query: 361 QKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAV 413
+K + KA + EI +KG P ++S I G + + A + E L V
Sbjct: 355 KKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRV 407
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 126/273 (46%), Gaps = 2/273 (0%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L++ +EG V ES +L+ M + G + Y+ +M Y G+ +K + L M
Sbjct: 223 YNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMV 282
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ GV PD +SY I IN + N+L+EM ++ I D TYS++ + G +
Sbjct: 283 QTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIP-DTVTYSSLIDGLCKLG-R 340
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
I+ L K + + + YN L+ N D+ + + K + + Y
Sbjct: 341 ITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTA 400
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
++ L K G L++ + + + + YC D +++ G ++GM ++A A+ ++ G
Sbjct: 401 LIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNG 460
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
P ++ II +K+ +KA + + E +A
Sbjct: 461 CIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIA 493
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/353 (19%), Positives = 151/353 (42%), Gaps = 10/353 (2%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
VL + + G + + + L +++ L + K +L + + QG + + L+ +
Sbjct: 67 VLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLC 126
Query: 116 KVRGLESAETYFNSLNDEDKVDK--LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
K+ A ++ D +Y +++ ++ LVDE+ L +M G F +
Sbjct: 127 KIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVI 186
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
Y ++C + GQ + +L +M + P+ ++Y I++ ++ +N+L M
Sbjct: 187 TYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVM 246
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKA-IIYLKKCEDIVSKSKDALGYNHLISHYASL 292
++ + D YS + + Y + G +KA I+L + V + D YN +I+
Sbjct: 247 -TKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGV--NPDVYSYNIIINGLCKG 303
Query: 293 GNKDEMMKFWGLQKIKCKKQL--NRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFR 350
DE M L+++ K + Y +++ L K+G + + +E +
Sbjct: 304 KRVDEAMNL--LREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLV 361
Query: 351 VPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
N +L G + ++KA A+ ++ ++G P +++ + G ++K
Sbjct: 362 TYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKG 414
>gi|255660926|gb|ACU25632.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 484
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 96/434 (22%), Positives = 181/434 (41%), Gaps = 36/434 (8%)
Query: 79 LRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAETYFNSLN------ 131
L K +HALQ W+ L + H ++++G+ L A +
Sbjct: 19 LHGAKNSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEW 78
Query: 132 DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
DED ++ +++ Y +EG+V ES+ L QKM+E+G + +Y+ + + G+
Sbjct: 79 DED----MWVLMIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVIMRRGRFMMA 134
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
M G+ P ++ + I + ++ + ++M+S+ IS D TY+T+ N
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR-EISPDVITYNTMIN 193
Query: 252 YYIIAGLKEKAIIYL-----KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQK 306
Y E+A Y K E V + Y LI Y S+ D+ ++ K
Sbjct: 194 GYCRVKKMEEAEKYFVEMKGKNIEPTV------VTYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 307 IKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEW-ELSCYCYDFRVPNIILLGYSQKGMI 365
K Y T+L L ++ EA +L+E + D + ++ + + G +
Sbjct: 248 GYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISSHCKVGNL 307
Query: 366 EKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPK-- 423
+ A VLK +++ + ++ Y ++A + + + + E++ RP+
Sbjct: 308 DAAADVLKAMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLI---EKDIIVRPQST 364
Query: 424 ----PSLVSSILDWLGDNRDVEEVEAFVSSL-KIKVQKRNMYHALTEAHIRSGQEVDG-- 476
PS + I+++L +N + EA V L K+ VQ + L H + G
Sbjct: 365 LHMEPSAYNPIVEYLCNNGQTSKAEALVRQLMKLGVQDPTALNTLIRGHSQEGSPDSAFE 424
Query: 477 LLESMKADDIDEDK 490
LL+ M +D +K
Sbjct: 425 LLKIMLRRKVDSEK 438
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 163/392 (41%), Gaps = 34/392 (8%)
Query: 65 QKISELELQRVIRQ-------LRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQL---DLI 114
QK+ EL ++R I+ + R RF A + M +G+ + H V + L
Sbjct: 104 QKMEELGVERTIKSYDALFKVIMRRGRFMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLS 163
Query: 115 GKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
GKV E+A +F + + + Y ++N Y R ++E+ +MK +
Sbjct: 164 GKV---ETANRFFEDMKSREISPDVITYNTMINGYCRVKKMEEAEKYFVEMKGKNIEPTV 220
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQE 232
+ Y ++ Y + Q + ++ +MK G+ P+ +Y + ++S ++L+E
Sbjct: 221 VTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKE 280
Query: 233 MESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASL 292
M + D + + + + G + A LK + S +A Y LI +Y
Sbjct: 281 MVDKYIAPTDNSIFMRLISSHCKVGNLDAAADVLKAMIRL-SVPTEAGHYGVLIENYCKA 339
Query: 293 GNKDEMMKFWGLQKIKCKKQLNRD----------YITMLGSLVKIGELEEAEKMLEEWEL 342
G D+ +K L K+ K + R Y ++ L G+ +AE ++ + +
Sbjct: 340 GQYDQAVKL--LDKLIEKDIIVRPQSTLHMEPSAYNPIVEYLCNNGQTSKAEALVRQL-M 396
Query: 343 SCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEK 402
D N ++ G+SQ+G + A +LK ++++ +++ + Y K+
Sbjct: 397 KLGVQDPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKKSEPAD 456
Query: 403 AFECMKEALAVHEENKFWRPKPSLVSSILDWL 434
A K AL EN P SL S+++ L
Sbjct: 457 A----KAALDSMIENDHL-PDSSLFRSVMESL 483
>gi|255660882|gb|ACU25610.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
Length = 484
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 94/432 (21%), Positives = 186/432 (43%), Gaps = 32/432 (7%)
Query: 79 LRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAETYFNSLN------ 131
L S K +HALQ W+ L + H ++++G+ L A +
Sbjct: 19 LHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEW 78
Query: 132 DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
DED ++ +++ Y +EG+V ES+ + QKM+E+G + +YN + + G++
Sbjct: 79 DED----MWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMA 134
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
M G+ P ++ + I + ++ + ++M+S+ IS D TY+T+ N
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR-EISPDVVTYNTMIN 193
Query: 252 -YYIIAGLKEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
YY + ++E +++ K +I + Y LI Y S+ D+ ++ K
Sbjct: 194 GYYRVKKMEEAEKYFVEMKGRNI---EPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFG 250
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYC--YDFRVPNIILLGYSQKGMIEK 367
K Y T+L L ++ EA +L+E + Y D + ++ + + G ++
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARVILKEM-MDKYLAPTDNSIFMRLISSHCKSGNLDA 309
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPK---- 423
A VLK +++ + + + +KA + + + + E++ RP+
Sbjct: 310 AADVLKAMIRLSVPTEAGHYGXLIENFCKVGQYDKAVKLLDKLI---EKDIILRPQSTLH 366
Query: 424 --PSLVSSILDWLGDNRDVEEVEAFVSSL-KIKVQKRNMYHALTEAHIRSGQEVDG--LL 478
PS + ++++L +N + E V L K+ VQ + L H + G LL
Sbjct: 367 LEPSAYNPMIEYLCNNGQAXKAETLVRQLXKLGVQDPTALNTLIRGHSQEGSPDSAFELL 426
Query: 479 ESMKADDIDEDK 490
+ M +D +K
Sbjct: 427 KIMLRRKVDSEK 438
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 84/392 (21%), Positives = 164/392 (41%), Gaps = 34/392 (8%)
Query: 65 QKISELELQRVIRQLRS-------RKRFKHALQVSEWMSGQGLAFSVHDHAVQL---DLI 114
QK+ EL ++R I+ + R R+ A + M +G+ + H V + L
Sbjct: 104 QKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLS 163
Query: 115 GKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
GKV E+A +F + + + Y ++N Y R ++E+ +MK +
Sbjct: 164 GKV---ETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTV 220
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQE 232
+ Y ++ Y + Q + ++ +MK G+ P+ +Y + ++S +L+E
Sbjct: 221 VTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKE 280
Query: 233 MESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASL 292
M + D + + + + +G + A LK + S +A Y LI ++ +
Sbjct: 281 MMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRL-SVPTEAGHYGXLIENFCKV 339
Query: 293 GNKDEMMKFWGLQKIKCKKQLNRD----------YITMLGSLVKIGELEEAEKMLEEWEL 342
G D+ +K L K+ K + R Y M+ L G+ +AE ++ +
Sbjct: 340 GQYDKAVKL--LDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQAXKAETLVRQLX- 396
Query: 343 SCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEK 402
D N ++ G+SQ+G + A +LK ++++ ++++ + Y KN
Sbjct: 397 KLGVQDPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXD 456
Query: 403 AFECMKEALAVHEENKFWRPKPSLVSSILDWL 434
A K AL EN P +L S+++ L
Sbjct: 457 A----KAALDSMIENDHL-PDSALFRSVMEXL 483
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 109/535 (20%), Positives = 215/535 (40%), Gaps = 96/535 (17%)
Query: 17 TKTNLEIFTRAYRAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVI 76
T T E F R + ++ V N+L+ D++L P+ WV RV+
Sbjct: 72 TSTYSEDFDRDW--IRKVVHNDLWDDPGLEKLFDLTLAPI---WV-----------PRVL 115
Query: 77 RQLRSRKRFKHALQVSEW-MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSL----N 131
+L+ K A + +W M+ G SV + + ++ R A + +
Sbjct: 116 VELKEDP--KLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKA 173
Query: 132 DEDKVDKL-------------YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGI 178
D D D L + AL + + G+++E++ KMK F + NG+
Sbjct: 174 DCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGL 233
Query: 179 MCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSH 238
+ + G+ + + DM G P F+Y I I+ ++ + + +EM+ +
Sbjct: 234 LHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGL 293
Query: 239 ISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEM 298
+ D TY+++ + + G + + + ++ +D+ + D + YN LI+ + G
Sbjct: 294 VP-DTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEP-DVITYNALINCFCKFGKLPIG 351
Query: 299 MKFW------GL---------------------QKIKCKKQLNR--------DYITMLGS 323
++F+ GL Q IK + R Y +++ +
Sbjct: 352 LEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDA 411
Query: 324 LVKIGELEEA----EKMLE---EWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
KIG L +A +ML+ EW + Y ++ G +++A+ + ++
Sbjct: 412 NCKIGNLSDAFRLGNEMLQVGVEWNVVTY-------TALIDGLCDAERMKEAEELFGKMD 464
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGD 436
G P S++ + G+ NM++A E + E + + +P L + + L
Sbjct: 465 TAGVIPNLASYNALIHGFVKAKNMDRALELLNEL-----KGRGIKPDLLLYGTFIWGLCS 519
Query: 437 NRDVEEVEAFVSSLKIKVQKRN--MYHALTEAHIRSGQEVDG--LLESMKADDID 487
+E + ++ +K K N +Y L +A+ +SG +G LL+ MK DI+
Sbjct: 520 LEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIE 574
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 90/472 (19%), Positives = 189/472 (40%), Gaps = 30/472 (6%)
Query: 21 LEIFTRAYR-AVKPVAR--NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIR 77
++ F++ R V P R N L R + LG D + + G + + +I
Sbjct: 212 IQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTD-DVKRFFKDMIGAGARPTVFTYNIMID 270
Query: 78 QLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLND---ED 134
+ + A + E M +GL + +D GKV L+ +F + D E
Sbjct: 271 CMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEP 330
Query: 135 KVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDV 194
V Y AL+NC+ + G + L ++MK G + ++Y+ ++ + G ++
Sbjct: 331 DVIT-YNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKF 389
Query: 195 LLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYI 254
+DM+ G+ P+ ++Y I+ A ++ ++ + + + ++W + A +
Sbjct: 390 YVDMRRVGLVPNEYTYTSLID---ANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTA---L 443
Query: 255 IAGLKEKAIIYLKKCEDIVSKSKDA------LGYNHLISHYASLGNKDEMMKFWGLQKIK 308
I GL + +K+ E++ K A YN LI + N D ++ K +
Sbjct: 444 IDGLCDAE--RMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGR 501
Query: 309 CKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKA 368
K Y T + L + ++E A+ ++ E + + + ++ Y + G +
Sbjct: 502 GIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEG 561
Query: 369 DAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKF-WRPKPSLV 427
+L E+ + T ++ ++ G + KA + N F + ++
Sbjct: 562 LHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRI-----SNDFGLQANAAIF 616
Query: 428 SSILDWLGDNRDVEEVEAFVSSLKIK--VQKRNMYHALTEAHIRSGQEVDGL 477
++++D L + VE + K V R Y +L + + + G ++ L
Sbjct: 617 TAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEAL 668
>gi|293335157|ref|NP_001169529.1| uncharacterized protein LOC100383403 [Zea mays]
gi|224029903|gb|ACN34027.1| unknown [Zea mays]
gi|414887232|tpg|DAA63246.1| TPA: hypothetical protein ZEAMMB73_160132 [Zea mays]
Length = 819
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 145/321 (45%), Gaps = 21/321 (6%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ALL Y G+ E+L + +K+ G ++Y ++ Y + Q EK +V +M+
Sbjct: 368 YNALLGAYASHGMHTEALETFKLLKQNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNEMR 427
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+N P+ SY I++YG+ L ++L EME Q I D + ST+ + A +
Sbjct: 428 KNACKPNKVSYNALIDAYGSAGMLKEAISLLHEME-QDGIQPDVISISTL----LTACGR 482
Query: 260 EKAIIYLKKCEDIVSKSK------DALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQL 313
K L K + I++ +K + + YN I Y SLG+ + + + + K
Sbjct: 483 CKQ---LTKIDIILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKALVLYTSMRAGNVKPD 539
Query: 314 NRDYITMLGSLVKIGELEEAEKMLEEW-ELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
Y ++ K+G E+ K E+ +L+ + V + ++ Y ++G + +A +
Sbjct: 540 AVTYNILISGSCKLGRYVESLKFFEDMLDLNIHLTK-EVYSSVICSYVKQGKLTEAASTF 598
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILD 432
+ + G P +++ + Y+D + +A++ KE EN +P + SS+++
Sbjct: 599 NSMKETGCFPDVLTYTTLIKAYSDDGSWRRAWDLFKEM-----ENNGTQPDAIVCSSLME 653
Query: 433 WLGDNRDVEEVEAFVSSLKIK 453
L E V + +K K
Sbjct: 654 ALNKGGQPERVLQLIEFMKQK 674
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 99/452 (21%), Positives = 177/452 (39%), Gaps = 86/452 (19%)
Query: 45 PLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSV 104
P D D ++ VL+ W + + +IR++ KHA+ V WM Q
Sbjct: 97 PHADAD-AVDAVLNCW---AGRFARRNFPLLIREIAISGSLKHAVHVFRWMKNQ------ 146
Query: 105 HDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMK 164
E Y + ND +YG ++ + R VD++ L +M+
Sbjct: 147 -------------------ENYC-ARND------IYGMMIRLHARHNKVDQARGLFFEMQ 180
Query: 165 EMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELS 224
E + YN ++ + GQ +++ DM+ +PP +Y IN+ GA
Sbjct: 181 EWRCKPNTDTYNSLIHAHARAGQWCWAINIMDDMQRAAIPPSRTTYNNVINACGAAGNWK 240
Query: 225 SMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNH 284
+ ++M +++ + D T++ V +S K+ Y+
Sbjct: 241 KALELCKKM-TENGVGPDLITHNIV-----------------------LSAFKNGAQYSK 276
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKM---LEEWE 341
I+++ E+MK + C + ++ LVKIG EA ++ + E
Sbjct: 277 AIAYF-------EIMKSSKVAPDTCTMNI------VIHCLVKIGLYGEAIELFNSMRERR 323
Query: 342 LSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNME 401
+C+ D I+ YS G E AV +V +G P S++ + YA
Sbjct: 324 TTCH-PDVVTYTSIMYSYSVCGQAENCKAVFDIMVAEGVRPNIVSYNALLGAYASHGMHT 382
Query: 402 KAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRN--M 459
+A E K + ++N RP +S+L+ G + E+ + ++ K N
Sbjct: 383 EALETFK----LLKQNGL-RPDIVSYTSLLNAYGRSAQPEKAREVFNEMRKNACKPNKVS 437
Query: 460 YHALTEAHIRSG--QEVDGLLESMKADDIDED 489
Y+AL +A+ +G +E LL M+ D I D
Sbjct: 438 YNALIDAYGSAGMLKEAISLLHEMEQDGIQPD 469
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 96/212 (45%), Gaps = 8/212 (3%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
++Y +++ YV++G + E+ S MKE G F L Y ++ Y++ G + D+ +
Sbjct: 576 EVYSSVICSYVKQGKLTEAASTFNSMKETGCFPDVLTYTTLIKAYSDDGSWRRAWDLFKE 635
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEME--SQSHISMDWGTY-STVANYYI 254
M+ NG PD +C + A ++ E VLQ +E Q I ++ Y +++ +
Sbjct: 636 MENNGTQPDAI---VCSSLMEALNKGGQPERVLQLIEFMKQKKIQLNQKAYFEIISSCTM 692
Query: 255 IAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN 314
+ K + I + S S L NH+++ G + MMK + C
Sbjct: 693 LRDWKTASQIIEHLDSSLSSISFGTL--NHILNFLGKCGRTESMMKLFYKMVTSCSTVGL 750
Query: 315 RDYITMLGSLVKIGELEEAEKMLEEWELSCYC 346
Y +L +L+ +G+ + ++L+ E + C
Sbjct: 751 STYTILLRNLLIVGKWRKYVEVLQWMEDAGVC 782
>gi|255660878|gb|ACU25608.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 484
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 92/422 (21%), Positives = 182/422 (43%), Gaps = 31/422 (7%)
Query: 79 LRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAETYFNSLN------ 131
L S K +HALQ W+ L + H ++++G+ L A +
Sbjct: 19 LHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEW 78
Query: 132 DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
DED ++ +++ Y +EG+V ES+ + QKM+E+G + +YN + + G++
Sbjct: 79 DED----MWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMA 134
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
M G+ P ++ + I + ++ + ++M+S+ IS D TY+T+ N
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR-EISPDVVTYNTMIN 193
Query: 252 -YYIIAGLKEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
YY + ++E +++ K +I + Y LI Y S+ D+ ++ K
Sbjct: 194 GYYRVKKMEEAEKYFVEMKGRNI---EPTVVTYTTLIKGYVSVDQVDDXLRLVEEMKGFG 250
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYC--YDFRVPNIILLGYSQKGMIEK 367
K Y T+L L ++ EA +L+E + Y D + ++ + + G ++
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARVILKEM-MDKYLAPTDNSIFMRLISSHCKSGNLDA 309
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPK---- 423
A VLK +++ + + + +KA + + + + E++ RP+
Sbjct: 310 AADVLKAMIRLSVPTEAGHYGXLIENFCKAGQYDKAVKLLDKLI---EKDIILRPQSTLH 366
Query: 424 --PSLVSSILDWLGDNRDVEEVEAFVSSL-KIKVQKRNMYHALTEAHIRSGQEVDGLLES 480
PS + ++++L +N + E V L K+ VQ + L H + G D E
Sbjct: 367 LEPSAYNPMIEYLCNNGQAXKAETLVRQLXKLGVQDPTALNTLIRGHSQEGSP-DSAFEL 425
Query: 481 MK 482
+K
Sbjct: 426 LK 427
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 138/330 (41%), Gaps = 54/330 (16%)
Query: 116 KVRGLESAETYFNSL---NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
+V+ +E AE YF + N E V Y L+ YV VD+ L L+++MK G +A
Sbjct: 197 RVKKMEEAEKYFVEMKGRNIEPTV-VTYTTLIKGYVSVDQVDDXLRLVEEMKGFGIKPNA 255
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP-DNFSYRICINSYGARSELSSMENVLQ 231
+ Y+ ++ N + + +L +M + + P DN + I+S+ L + +VL+
Sbjct: 256 ITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLK 315
Query: 232 EMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC--EDIVSKSKDAL-----GYNH 284
M S + + G Y + + AG +KA+ L K +DI+ + + L YN
Sbjct: 316 AMIRLS-VPTEAGHYGXLIENFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNP 374
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSC 344
+I + + G Q K + T++ L K+G
Sbjct: 375 MIEYLCNNG-----------QAXKAE--------TLVRQLXKLG---------------- 399
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
D N ++ G+SQ+G + A +LK ++++ +++ + KN A
Sbjct: 400 -VQDPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVBSEKSAYISLVQSXLKKNEPXDA- 457
Query: 405 ECMKEALAVHEENKFWRPKPSLVSSILDWL 434
K AL EN P +L S+++ L
Sbjct: 458 ---KAALDSMIENDHL-PDSALFRSVMESL 483
>gi|255660924|gb|ACU25631.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 484
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 92/421 (21%), Positives = 181/421 (42%), Gaps = 29/421 (6%)
Query: 79 LRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAETYFNSLN------ 131
L K +HALQ W+ L + H ++++G+ L A +
Sbjct: 19 LHGAKNSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEW 78
Query: 132 DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
DED ++ +++ Y +EG+V ES+ L QKM+E+G + +Y+ + + G+
Sbjct: 79 DED----MWVLMIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVIMRRGRFMMA 134
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
M G+ P ++ + I + ++ + ++M+S+ IS D TY+T+ N
Sbjct: 135 KRYFNKMLSXGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR-EISPDVITYNTMIN 193
Query: 252 -YYIIAGLKEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
YY + ++E +++ K ++I + Y LI Y S+ D+ ++ K
Sbjct: 194 GYYRVKKMEEAEKYFVEMKGKNI---EPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGYG 250
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEW-ELSCYCYDFRVPNIILLGYSQKGMIEKA 368
K Y T+L L ++ EA +L+E + D + ++ + G ++ A
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISSQCKAGNLDAA 310
Query: 369 DAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPK----- 423
VLK +++ + ++ Y ++A + + + + E++ RP+
Sbjct: 311 ADVLKSMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLI---EKDIIVRPQSTLHM 367
Query: 424 -PSLVSSILDWLGDNRDVEEVEAFVSSL-KIKVQKRNMYHALTEAHIRSGQEVDGLLESM 481
PS + I+++L +N + EA V L K+ VQ + L H + G D E +
Sbjct: 368 EPSAYNPIVEYLCNNGQTSKAEALVRQLMKLGVQDPTALNTLIRGHSQEGSP-DSAFELL 426
Query: 482 K 482
K
Sbjct: 427 K 427
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 86/392 (21%), Positives = 162/392 (41%), Gaps = 34/392 (8%)
Query: 65 QKISELELQRVIRQ-------LRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQL---DLI 114
QK+ EL ++R I+ + R RF A + M G+ + H V + L
Sbjct: 104 QKMEELGVERTIKSYDALFKVIMRRGRFMMAKRYFNKMLSXGIEPTRHTFNVMIWGFFLS 163
Query: 115 GKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
GKV E+A +F + + + Y ++N Y R ++E+ +MK +
Sbjct: 164 GKV---ETANRFFEDMKSREISPDVITYNTMINGYYRVKKMEEAEKYFVEMKGKNIEPTV 220
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQE 232
+ Y ++ Y + Q + ++ +MK G+ P+ +Y + ++S ++L+E
Sbjct: 221 VTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKE 280
Query: 233 MESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASL 292
M + D + + + AG + A LK + S +A Y LI +Y
Sbjct: 281 MVDKYIAPTDNSIFMRLISSQCKAGNLDAAADVLKSMIRL-SVPTEAGHYGVLIENYCKA 339
Query: 293 GNKDEMMKFWGLQKIKCKKQLNRD----------YITMLGSLVKIGELEEAEKMLEEWEL 342
G D+ +K L K+ K + R Y ++ L G+ +AE ++ + +
Sbjct: 340 GQYDQAVKL--LDKLIEKDIIVRPQSTLHMEPSAYNPIVEYLCNNGQTSKAEALVRQL-M 396
Query: 343 SCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEK 402
D N ++ G+SQ+G + A +LK ++++ +++ + Y K+
Sbjct: 397 KLGVQDPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVGSEKSAYDSLVQSYLKKSEPAD 456
Query: 403 AFECMKEALAVHEENKFWRPKPSLVSSILDWL 434
A K AL EN P SL S+++ L
Sbjct: 457 A----KAALDSMIENDHL-PDSSLFRSVMESL 483
>gi|255660940|gb|ACU25639.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 484
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 93/433 (21%), Positives = 183/433 (42%), Gaps = 29/433 (6%)
Query: 67 ISELELQRVIRQLRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAET 125
+ ++ + V L S K +HALQ W+ L + H ++++G+ L A
Sbjct: 7 VPSIDHELVYNVLHSAKNSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARC 66
Query: 126 YFNSLN------DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM 179
+ DED L+ +++ Y + G+V ES+ + QKM+E+G + +Y+ +
Sbjct: 67 ILLDMPKKGLEWDED----LWVLMIDSYGKAGIVQESVKMFQKMEELGVERTIKSYDALF 122
Query: 180 CLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHI 239
+ G++ M G+ P ++ + + + ++ + ++M+S+ I
Sbjct: 123 KVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMMWGFFLSGKVETANRFFEDMKSR-EI 181
Query: 240 SMDWGTYSTVANYYIIAGLKEKAIIYL--KKCEDIVSKSKDALGYNHLISHYASLGNKDE 297
D TY+T+ N Y E+A Y K +I + Y LI Y S+ D+
Sbjct: 182 MPDVVTYNTMVNGYCRVKKMEEAEKYFVEMKGRNI---EPTVVTYTTLIKGYVSVDRVDD 238
Query: 298 MMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEW-ELSCYCYDFRVPNIIL 356
++F K K Y T+L L ++ EA +L+E + D + ++
Sbjct: 239 ALRFVEEMKGFGMKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLI 298
Query: 357 LGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEE 416
G + G ++ A VLK +++ + ++ Y +KA + + + + E+
Sbjct: 299 SGQCKAGDLDAAANVLKAMIRLSVPTEAGHYGVLIENYCKAGEYDKAIKLLDKVI---EK 355
Query: 417 NKFWRPKPSL------VSSILDWLGDNRDVEEVEAFVSSL-KIKVQKRNMYHALTEAHIR 469
+ RP+ +L + ++++L +N + EA V L K+ VQ + L H +
Sbjct: 356 DIILRPQSTLHMESSAYNPLIEYLCNNGQTAKAEALVRQLMKLGVQDPTALNTLIRGHSQ 415
Query: 470 SGQEVDGLLESMK 482
G D E +K
Sbjct: 416 EGSP-DSAFELLK 427
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 138/330 (41%), Gaps = 54/330 (16%)
Query: 116 KVRGLESAETYFNSL---NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
+V+ +E AE YF + N E V Y L+ YV VD++L +++MK G +A
Sbjct: 197 RVKKMEEAEKYFVEMKGRNIEPTV-VTYTTLIKGYVSVDRVDDALRFVEEMKGFGMKPNA 255
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP-DNFSYRICINSYGARSELSSMENVLQ 231
+ Y+ ++ N + + +L +M + + P DN + I+ +L + NVL+
Sbjct: 256 ITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISGQCKAGDLDAAANVLK 315
Query: 232 EMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC--EDIVSKSKDAL-----GYNH 284
M S + + G Y + Y AG +KAI L K +DI+ + + L YN
Sbjct: 316 AMIRLS-VPTEAGHYGVLIENYCKAGEYDKAIKLLDKVIEKDIILRPQSTLHMESSAYNP 374
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSC 344
LI + + G Q K + ++ L+K+G
Sbjct: 375 LIEYLCNNG-----------QTAKAE--------ALVRQLMKLG---------------- 399
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
D N ++ G+SQ+G + A +LK ++++ +++ + Y KN A
Sbjct: 400 -VQDPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEQSAYDSLVQSYLKKNEPADA- 457
Query: 405 ECMKEALAVHEENKFWRPKPSLVSSILDWL 434
K AL EN P SL S+++ L
Sbjct: 458 ---KAALDSMIENGHL-PDSSLFRSVMESL 483
>gi|91806413|gb|ABE65934.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 279
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 96/191 (50%), Gaps = 8/191 (4%)
Query: 43 ISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAF 102
I L P +T +L++ +G K+S L+ +I+ LR + AL+ S WM Q F
Sbjct: 93 IRGLATP---ITLLLEEMDKKGNKVSPPGLRDLIKNLRDSNQLSKALEASTWMC-QKKVF 148
Query: 103 SV--HDHAVQLDLIGKVRGLESAETYFNSLNDEDKVD-KLYGALLNCYVREG-LVDESLS 158
++ D+A +L L KV GLE AE +F S E+ D +Y LL+CY R ++ +
Sbjct: 149 NLFSEDYATRLHLTEKVLGLEEAENFFESSIPENMKDYSVYDTLLSCYARSSNTQSKAEA 208
Query: 159 LMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYG 218
+ +KM+E+G +N ++ LY+ G+ + +L DMK + PD + + +
Sbjct: 209 VFEKMRELGLQSKLSPFNSLISLYSGQGKLSVVNILLCDMKHKNIEPDIVTRNNVLRANA 268
Query: 219 ARSELSSMENV 229
+ SME V
Sbjct: 269 YILAIDSMEKV 279
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 105/224 (46%), Gaps = 37/224 (16%)
Query: 286 ISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKML-EEWELSC 344
+S Y G +++ + W K +K N ++ T++GSL+K+G+ + AEK+ EWE S
Sbjct: 1 MSLYGEAGEIEDVHRVWDKYKATRQKD-NEEFRTLIGSLLKLGDTKGAEKIYYNEWECSG 59
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADA-----------------VLKEIVKKGKTPTPNSW 387
+D R+P++++ GY +KGM+ KAD +L+E+ KKG +P
Sbjct: 60 LEFDNRIPDMLVSGYREKGMVMKADKLVNKTLWIRGLATPITLLLEEMDKKGNKVSPPGL 119
Query: 388 SIIAAGYADKNNMEKAFE-----CMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEE 442
+ D N + KA E C K+ + E+ + + L +L +EE
Sbjct: 120 RDLIKNLRDSNQLSKALEASTWMCQKKVFNLFSED--YATRLHLTEKVL-------GLEE 170
Query: 443 VEAFV-SSLKIKVQKRNMYHALTEAHIRSGQ---EVDGLLESMK 482
E F SS+ ++ ++Y L + RS + + + E M+
Sbjct: 171 AENFFESSIPENMKDYSVYDTLLSCYARSSNTQSKAEAVFEKMR 214
>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
Length = 859
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 147/339 (43%), Gaps = 50/339 (14%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLD-LIGKVRGLESAETYFNSLNDE 133
+++ R KHAL V + MS G + + L L+ K G A F+ +
Sbjct: 162 LMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEG-RVAVMVFDQIVGT 220
Query: 134 DKVDKLY--GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
V +Y ++N + + G VD ++ +++KM + G + + YNG++ Y G E +
Sbjct: 221 GIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGV 280
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
VL M E GV + + + + Y + ++ E +L+E+E + +D Y + +
Sbjct: 281 ERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVD 340
Query: 252 YYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQ--KIKC 309
Y G E A+ +DEM++ GL+ + C
Sbjct: 341 GYCQMGRMEDAVRI-----------------------------RDEMLRV-GLKVNMVIC 370
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKM---LEEWELSCYCYDFRVPNIILLGYSQKGMIE 366
T++ K+G++ EAE++ + +W L CY + N +L GY ++G +
Sbjct: 371 N--------TLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSY---NTLLDGYCREGKVS 419
Query: 367 KADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
KA + +E++ G TPT +++ + G D + + A
Sbjct: 420 KAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALH 458
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 84/442 (19%), Positives = 184/442 (41%), Gaps = 54/442 (12%)
Query: 46 LGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVH 105
+G DV++ VL++ V EG + + + ++ R F+ +V MS +G++ +V
Sbjct: 239 VGRVDVAM-EVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVV 297
Query: 106 DHAVQLDLIGKVRGLESAETYFNSLNDEDKV---DKLYGALLNCYVREGLVDESLSLMQK 162
+ + K ++ AE + +++ + +++YG L++ Y + G +++++ + +
Sbjct: 298 TCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDE 357
Query: 163 MKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSE 222
M +G + + N ++ Y GQ + V + M + + PD +SY ++ Y +
Sbjct: 358 MLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGK 417
Query: 223 LSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGY 282
+S + +EM + G TV Y
Sbjct: 418 VSKAFMLCEEM-------LGDGITPTVVTY------------------------------ 440
Query: 283 NHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWEL 342
N +I +G+ D+ + W L + TML K+G+ + A + +E
Sbjct: 441 NTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILG 500
Query: 343 SCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEK 402
+ N ++ G + G + +A AV + + G +P ++ ++ GY N+++
Sbjct: 501 RGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQE 560
Query: 403 AFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNMYHA 462
AF+ +K + E + + +S++D L R + + V+ L +++Q R
Sbjct: 561 AFQ-IKGVM----ERQAMSASIEMYNSLIDGLFKIRKLND----VTDLLVEMQTR----G 607
Query: 463 LTEAHIRSGQEVDGLLESMKAD 484
L+ + G + G + K D
Sbjct: 608 LSPNVVTYGTLISGWCDEQKLD 629
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 55/297 (18%), Positives = 111/297 (37%), Gaps = 33/297 (11%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L + Y + G V E+ + M+ S YN ++ + + D+L++M+
Sbjct: 545 YRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQ 604
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G+ P+ +Y I+ + +L ++ EM + V++ Y +
Sbjct: 605 TRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRIS 664
Query: 260 EKAIIYLK-----------KCED----------------------IVSKSKDALGYNHLI 286
E +I K KC D I + + + YN I
Sbjct: 665 EATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAI 724
Query: 287 SHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYC 346
G DE + + N Y T++ + G ++EA K+ +E
Sbjct: 725 DGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLI 784
Query: 347 YDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
+ + N ++ G + G I++A + ++ +KG P +++I+ Y +++KA
Sbjct: 785 PNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKA 841
>gi|255660934|gb|ACU25636.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 484
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 95/431 (22%), Positives = 184/431 (42%), Gaps = 30/431 (6%)
Query: 79 LRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAETYFNSLN------ 131
L K+ +HALQ W+ L + H ++++G+ L A +
Sbjct: 19 LHGSKKSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEW 78
Query: 132 DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
DED L+ +++ Y + G+V ES+ L QKM+E+G + +Y+ + + G++
Sbjct: 79 DED----LWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRYMMA 134
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
M G+ P ++ + I + ++ + ++M+ + IS D TY+T+ N
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLCGKVETANRFFEDMKXR-EISPDVITYNTMIN 193
Query: 252 -YYIIAGLKEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
YY + ++E +++ K +I + Y LI Y S+ D+ + K
Sbjct: 194 GYYRVKKIEEAEKYFVEMKGRNI---EPTVVTYTTLIKGYVSVDRVDDALTLLEEMKGFG 250
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEW-ELSCYCYDFRVPNIILLGYSQKGMIEKA 368
K Y T+L L ++ EA +L+E + D + ++ G + G ++ A
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEASGILKEMVDKYIAPKDNSIFLRLISGQCKAGNLDAA 310
Query: 369 DAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPK----- 423
VLK +++ + ++ Y + EKA + + + + E++ RP+
Sbjct: 311 ADVLKAMIRLSVPTEAGHYGVLIENYCKAGDYEKAIKLLDKLI---EKDIVLRPQSSLHM 367
Query: 424 -PSLVSSILDWLGDNRDVEEVEAFVSSL-KIKVQKRNMYHALTEAHIRSGQEVDG--LLE 479
PS + ++++L +N + E V L K+ VQ + L H + G LL+
Sbjct: 368 EPSAYNPLVEYLCNNGQTAKAETLVRQLMKLGVQDPTALNTLIRGHSQEGSPDSAFELLK 427
Query: 480 SMKADDIDEDK 490
M ID +K
Sbjct: 428 IMLRRKIDSEK 438
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 141/330 (42%), Gaps = 54/330 (16%)
Query: 116 KVRGLESAETYFNSL---NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
+V+ +E AE YF + N E V Y L+ YV VD++L+L+++MK G +A
Sbjct: 197 RVKKIEEAEKYFVEMKGRNIEPTV-VTYTTLIKGYVSVDRVDDALTLLEEMKGFGIKPNA 255
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP-DNFSYRICINSYGARSELSSMENVLQ 231
+ Y+ ++ N + + +L +M + + P DN + I+ L + +VL+
Sbjct: 256 ITYSTLLPGLCNAEKMSEASGILKEMVDKYIAPKDNSIFLRLISGQCKAGNLDAAADVLK 315
Query: 232 EMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC--EDIVSKSKDAL-----GYNH 284
M S + + G Y + Y AG EKAI L K +DIV + + +L YN
Sbjct: 316 AMIRLS-VPTEAGHYGVLIENYCKAGDYEKAIKLLDKLIEKDIVLRPQSSLHMEPSAYNP 374
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSC 344
L+ + + G Q K + T++ L+K+G
Sbjct: 375 LVEYLCNNG-----------QTAKAE--------TLVRQLMKLG---------------- 399
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
D N ++ G+SQ+G + A +LK ++++ +S+ + Y K+ A
Sbjct: 400 -VQDPTALNTLIRGHSQEGSPDSAFELLKIMLRRKIDSEKSSYDSLVQSYLKKSEPADA- 457
Query: 405 ECMKEALAVHEENKFWRPKPSLVSSILDWL 434
K AL EN P SL S+++ L
Sbjct: 458 ---KAALDSMIENGHL-PDSSLFRSVMESL 483
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 135/315 (42%), Gaps = 44/315 (13%)
Query: 99 GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDES 156
G+ +V+ + ++ + K R E+ + + + + + Y L+N Y REGLV+E+
Sbjct: 252 GIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEA 311
Query: 157 LSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINS 216
L+ G L YN I+ G++++ DVL++M + G+ P+ +Y +
Sbjct: 312 FQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVE 371
Query: 217 YGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS 276
R + + + EM S+ + D ++S++ G +A+++ ++ E
Sbjct: 372 ICRRDNILEAQEIFDEM-SRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREME------ 424
Query: 277 KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKM 336
+ + +++I Y ++ + G L +A KM
Sbjct: 425 RSGIVPDNVI------------------------------YTILIDGFCRNGALSDALKM 454
Query: 337 LEEWELSCYCY-DFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYA 395
+E L+ C+ D N L G +K M AD + E+V++G P +++ + GY
Sbjct: 455 RDEM-LARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYC 513
Query: 396 DKNNMEKA---FECM 407
NM+KA FE M
Sbjct: 514 KDGNMDKALNLFEAM 528
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 141/328 (42%), Gaps = 43/328 (13%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYG--ALLN 145
AL++ + M +G V + L+ + K + A+ FN + + V Y L+
Sbjct: 451 ALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIR 510
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
Y ++G +D++L+L + M + YN ++ + G+ + ++ DM + P
Sbjct: 511 GYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIP 570
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
D+ SY +N + + L N+ +M + I + T +T+ Y +G KA Y
Sbjct: 571 DHISYGTVLNGFCSSGLLPEALNLCDQMLEKG-IRPNLVTCNTLIKGYCRSGDMPKAYEY 629
Query: 266 LKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGS 323
L K ++S D+ YN LI Y
Sbjct: 630 LSK---MISNGIIPDSFSYNTLIDGY---------------------------------- 652
Query: 324 LVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPT 383
+K LE+A ++ E E ++ N+IL G+ +G +++A+ VL+++++ G P
Sbjct: 653 -LKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPD 711
Query: 384 PNSWSIIAAGYADKNNMEKAFECMKEAL 411
++S + G+ ++NM++AF E L
Sbjct: 712 GATYSSLINGHVSQDNMKEAFRFHDEML 739
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/343 (18%), Positives = 150/343 (43%), Gaps = 22/343 (6%)
Query: 82 RKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV--DKL 139
R A ++ + MS +G+ + + + ++ + L A +F + V + +
Sbjct: 375 RDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVI 434
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L++ + R G + ++L + +M G F + YN + + +M
Sbjct: 435 YTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMV 494
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E G+ PD +++ I Y + N+ + M ++++ D TY+T+ + + AG
Sbjct: 495 ERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAM-VRTNLKPDKVTYNTLIDGFCKAGEM 553
Query: 260 EKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN--- 314
+A + +D++ K D + Y +++ + S G E + C + L
Sbjct: 554 GRA---KELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNL-------CDQMLEKGI 603
Query: 315 RDYITMLGSLVK----IGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADA 370
R + +L+K G++ +A + L + + D N ++ GY ++ +EKA
Sbjct: 604 RPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFI 663
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAV 413
++ E+ K+G ++++I G+ + M++A + +++ + +
Sbjct: 664 LINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEI 706
>gi|255660886|gb|ACU25612.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 484
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 92/422 (21%), Positives = 182/422 (43%), Gaps = 31/422 (7%)
Query: 79 LRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAETYFNSLN------ 131
L S K +HALQ W+ L + H ++++G+ L A +
Sbjct: 19 LHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEW 78
Query: 132 DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
DED ++ +++ Y +EG+V ES+ + QKM+E+G + +YN + + G++
Sbjct: 79 DED----MWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMA 134
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
M G+ P ++ + I + ++ + ++M+S+ IS D TY+T+ N
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR-EISPDVVTYNTMIN 193
Query: 252 -YYIIAGLKEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
YY + ++E +++ K +I + Y LI Y S+ D+ ++ K
Sbjct: 194 GYYRVKKMEEAEKYFVEMKGRNI---EPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFG 250
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYC--YDFRVPNIILLGYSQKGMIEK 367
K Y T+L L ++ EA +L+E + Y D + ++ + + G ++
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARVILKEM-MDKYLAPTDNSIFMRLISSHCKSGNLDA 309
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPK---- 423
A VLK +++ + + + +KA + + + + E++ RP+
Sbjct: 310 AADVLKAMIRLSVPTEAGHYGXLIENFCKXGQYDKAVKLLDKLI---EKDIILRPQSTLH 366
Query: 424 --PSLVSSILDWLGDNRDVEEVEAFVSSL-KIKVQKRNMYHALTEAHIRSGQEVDGLLES 480
PS + ++++L +N + E V L K+ VQ + L H + G D E
Sbjct: 367 LEPSAYNPMIEYLCNNGQXXKAETLVRQLXKLGVQDPTALNTLIRGHSQEGSP-DSAFEL 425
Query: 481 MK 482
+K
Sbjct: 426 LK 427
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 139/330 (42%), Gaps = 54/330 (16%)
Query: 116 KVRGLESAETYFNSL---NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
+V+ +E AE YF + N E V Y L+ YV VD++L L+++MK G +A
Sbjct: 197 RVKKMEEAEKYFVEMKGRNIEPTV-VTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNA 255
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP-DNFSYRICINSYGARSELSSMENVLQ 231
+ Y+ ++ N + + +L +M + + P DN + I+S+ L + +VL+
Sbjct: 256 ITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLK 315
Query: 232 EMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC--EDIVSKSKDAL-----GYNH 284
M S + + G Y + + G +KA+ L K +DI+ + + L YN
Sbjct: 316 AMIRLS-VPTEAGHYGXLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNP 374
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSC 344
+I + + G Q K + T++ L K+G
Sbjct: 375 MIEYLCNNG-----------QXXKAE--------TLVRQLXKLG---------------- 399
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
D N ++ G+SQ+G + A +LK ++++ ++++ + KN A
Sbjct: 400 -VQDPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVBSEKSAYNSLVQSXLKKNEPXDA- 457
Query: 405 ECMKEALAVHEENKFWRPKPSLVSSILDWL 434
K AL EN P +L S+++ L
Sbjct: 458 ---KAALDSMIENDHL-PDSALFRSVMESL 483
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 135/315 (42%), Gaps = 44/315 (13%)
Query: 99 GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDES 156
G+ +V+ + ++ + K R E+ + + + + + Y L+N Y REGLV+E+
Sbjct: 252 GIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEA 311
Query: 157 LSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINS 216
L+ G L YN I+ G++++ DVL++M + G+ P+ +Y +
Sbjct: 312 FQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVE 371
Query: 217 YGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS 276
R + + + EM S+ + D ++S++ G +A+++ ++ E
Sbjct: 372 ICRRDNILEAQEIFDEM-SRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREME------ 424
Query: 277 KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKM 336
+ + +++I Y ++ + G L +A KM
Sbjct: 425 RSGIVPDNVI------------------------------YTILIDGFCRNGALSDALKM 454
Query: 337 LEEWELSCYCY-DFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYA 395
+E L+ C+ D N L G +K M AD + E+V++G P +++ + GY
Sbjct: 455 RDEM-LARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYC 513
Query: 396 DKNNMEKA---FECM 407
NM+KA FE M
Sbjct: 514 KDGNMDKALNLFEAM 528
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 141/328 (42%), Gaps = 43/328 (13%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYG--ALLN 145
AL++ + M +G V + L+ + K + A+ FN + + V Y L+
Sbjct: 451 ALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIR 510
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
Y ++G +D++L+L + M + YN ++ + G+ + ++ DM + P
Sbjct: 511 GYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIP 570
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
D+ SY +N + + L N+ +M + I + T +T+ Y +G KA Y
Sbjct: 571 DHISYGTVLNGFCSSGLLPEALNLCDQMLEKG-IRPNLVTCNTLIKGYCRSGDMPKAYEY 629
Query: 266 LKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGS 323
L K ++S D+ YN LI Y
Sbjct: 630 LSK---MISNGIIPDSFSYNTLIDGY---------------------------------- 652
Query: 324 LVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPT 383
+K LE+A ++ E E ++ N+IL G+ +G +++A+ VL+++++ G P
Sbjct: 653 -LKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPD 711
Query: 384 PNSWSIIAAGYADKNNMEKAFECMKEAL 411
++S + G+ ++NM++AF E L
Sbjct: 712 GATYSSLINGHVSQDNMKEAFRFHDEML 739
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/343 (18%), Positives = 150/343 (43%), Gaps = 22/343 (6%)
Query: 82 RKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV--DKL 139
R A ++ + MS +G+ + + + ++ + L A +F + V + +
Sbjct: 375 RDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVI 434
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L++ + R G + ++L + +M G F + YN + + +M
Sbjct: 435 YTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMV 494
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E G+ PD +++ I Y + N+ + M ++++ D TY+T+ + + AG
Sbjct: 495 ERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAM-VRTNLKPDKVTYNTLIDGFCKAGEM 553
Query: 260 EKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN--- 314
+A + +D++ K D + Y +++ + S G E + C + L
Sbjct: 554 GRA---KELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNL-------CDQMLEKGI 603
Query: 315 RDYITMLGSLVK----IGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADA 370
R + +L+K G++ +A + L + + D N ++ GY ++ +EKA
Sbjct: 604 RPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFI 663
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAV 413
++ E+ K+G ++++I G+ + M++A + +++ + +
Sbjct: 664 LINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEI 706
>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 175/411 (42%), Gaps = 54/411 (13%)
Query: 108 AVQLDLIGKVRGLESAETYFNSL-NDEDKVD-KLYGALLNCYVREGLVDESLSLMQKMKE 165
AV + ++GK A + + L ND +D Y +L+ Y G E++ + +K++E
Sbjct: 189 AVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEE 248
Query: 166 MGSFGSALNYNGIMCLYTNTGQH-EKIPDVLLDMKENGVPPDNFSYRICINSYGARSELS 224
G + + YN I+ +Y G KI ++ MK +GV PD ++Y I+S S
Sbjct: 249 EGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYE 308
Query: 225 SMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNH 284
V +EM++ + S D TY+ + + Y + +A+ LK+ E + + YN
Sbjct: 309 EAAEVFEEMKA-AGFSPDKVTYNALLDVYGKSRRPREAMEVLKEME-ASGFAPSIVTYNS 366
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRD---YITMLGSLVKIGELEEAEKMLEEWE 341
LIS YA G DE M+ L+ KK + D Y T+L K G+ + A K+ EE
Sbjct: 367 LISAYARDGLLDEAME---LKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMR 423
Query: 342 LS----------------------------------CYCY-DFRVPNIILLGYSQKGMIE 366
++ C C D N +L + Q GM
Sbjct: 424 VAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDS 483
Query: 367 KADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSL 426
+ V KE+ + G P ++++ + + Y+ ++A + L + P S
Sbjct: 484 EVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRML-----DAGVTPDLST 538
Query: 427 VSSILDWLGDNRDVEEVEAFVSSLKIKVQKRN--MYHALTEAHIRSGQEVD 475
+++L L E+ E ++ +K K N Y +L A+ +G+EV+
Sbjct: 539 YNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYA-NGKEVE 588
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 84/391 (21%), Positives = 177/391 (45%), Gaps = 18/391 (4%)
Query: 63 EGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLES 122
+G I +I S R++ A+ V + + +G ++ + V L++ GK+ G+
Sbjct: 214 DGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKM-GMPW 272
Query: 123 AET--YFNSLNDEDKVDKLY--GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGI 178
++ +S+ LY L++ R L +E+ + ++MK G + YN +
Sbjct: 273 SKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNAL 332
Query: 179 MCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSH 238
+ +Y + + + +VL +M+ +G P +Y I++Y AR L L+ +
Sbjct: 333 LDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAY-ARDGLLDEAMELKSQMVKKG 391
Query: 239 ISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEM 298
I D TY+T+ + + G + A+ ++ + + +N LI + + GN EM
Sbjct: 392 IKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMR-VAGCQPNICTFNALIKMHGNRGNFVEM 450
Query: 299 MKFWGLQKI-KCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL 357
MK + KI +C + + T+L + G E + +E + + + + N ++
Sbjct: 451 MKVFEEIKICECVPDI-VTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLIS 509
Query: 358 GYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEEN 417
YS+ G ++A A+ + ++ G TP ++++ + A A E++ + + E
Sbjct: 510 AYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEM------- 562
Query: 418 KFWRPKPSLVS--SILDWLGDNRDVEEVEAF 446
K R KP+ ++ S+L + ++VE + A
Sbjct: 563 KDGRCKPNELTYCSLLHAYANGKEVERMSAL 593
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 141/349 (40%), Gaps = 25/349 (7%)
Query: 38 NLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSG 97
N+Y + +G P + ++D G +I R ++ A +V E M
Sbjct: 263 NVYGK---MGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKA 319
Query: 98 QGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDE 155
G + + LD+ GK R A + + Y +L++ Y R+GL+DE
Sbjct: 320 AGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDE 379
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
++ L +M + G Y ++ + TG+ + V +M+ G P+ ++ I
Sbjct: 380 AMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIK 439
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDI-VS 274
+G R M V +E++ + D T++T+ + G+ + K+ +
Sbjct: 440 MHGNRGNFVEMMKVFEEIKICECVP-DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV 498
Query: 275 KSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
+D +N LIS Y+ G D+ M + Y +L +L + G E++E
Sbjct: 499 PERDT--FNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSE 556
Query: 335 KMLEEW--------ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
K+L E EL+ YC +L Y+ +E+ A+ +EI
Sbjct: 557 KVLAEMKDGRCKPNELT-YCS-------LLHAYANGKEVERMSALAEEI 597
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 166/399 (41%), Gaps = 28/399 (7%)
Query: 89 LQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGL------ESAETYFNSL-NDEDKVDKLYG 141
LQ+ E S GL F+ +V D++G ++GL E A F + N ED L
Sbjct: 129 LQLFE-TSSDGLNFT--SDSVSFDILGIIKGLVFYKKNELALCVFYFVRNREDFASILSN 185
Query: 142 ALLNCYV----REGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
+++ + +EG + SL+ ++ G Y ++ Y + G++ + V
Sbjct: 186 SVVAVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKK 245
Query: 198 MKENGVPPDNFSYRICINSYGARS-ELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
++E G P +Y + +N YG S + ++ M+S S ++ D TY+T+ +
Sbjct: 246 LEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKS-SGVAPDLYTYNTLISSCRRG 304
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
L E+A ++ + S D + YN L+ Y E M+ +
Sbjct: 305 SLYEEAAEVFEEMK-AAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVT 363
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y +++ + + G L+EA ++ + D +L G+ + G + A V +E+
Sbjct: 364 YNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMR 423
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVS--SILDWL 434
G P +++ + + ++ N E + V EE K P +V+ ++L
Sbjct: 424 VAGCQPNICTFNALIKMHGNRGN-------FVEMMKVFEEIKICECVPDIVTWNTLLAVF 476
Query: 435 GDNRDVEEVEAFVSSLKIK--VQKRNMYHALTEAHIRSG 471
G N EV +K V +R+ ++ L A+ R G
Sbjct: 477 GQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCG 515
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/325 (18%), Positives = 136/325 (41%), Gaps = 33/325 (10%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ L++ Y R G D+++++ ++M + G YN ++ G E+ VL +MK
Sbjct: 504 FNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMK 563
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ P+ +Y +++Y E+ M + +E+ YS + + LK
Sbjct: 564 DGRCKPNELTYCSLLHAYANGKEVERMSALAEEI------------YSGIIEPQAVL-LK 610
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI- 318
++Y K D++++++ A + + M+ +G +++ K ++I
Sbjct: 611 TLVLVYSK--SDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIK 668
Query: 319 --------TMLGSLV----KIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIE 366
T SL+ + E++E +L E D N ++ Y + G ++
Sbjct: 669 DSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMK 728
Query: 367 KADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSL 426
+A + E+ G P +++ A YA + +A + +K + +P +
Sbjct: 729 EASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMI-----KNGCKPNQNT 783
Query: 427 VSSILDWLGDNRDVEEVEAFVSSLK 451
+S++DW +E +F+S+L+
Sbjct: 784 YNSLIDWFCKLNRRDEASSFISNLR 808
>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 175/411 (42%), Gaps = 54/411 (13%)
Query: 108 AVQLDLIGKVRGLESAETYFNSL-NDEDKVD-KLYGALLNCYVREGLVDESLSLMQKMKE 165
AV + ++GK A + + L ND +D Y +L+ Y G E++ + +K++E
Sbjct: 189 AVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEE 248
Query: 166 MGSFGSALNYNGIMCLYTNTGQH-EKIPDVLLDMKENGVPPDNFSYRICINSYGARSELS 224
G + + YN I+ +Y G KI ++ MK +GV PD ++Y I+S S
Sbjct: 249 EGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYE 308
Query: 225 SMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNH 284
V +EM++ + S D TY+ + + Y + +A+ LK+ E + + YN
Sbjct: 309 EAAEVFEEMKA-AGFSPDKVTYNALLDVYGKSRRPREAMEVLKEME-ASGFAPSIVTYNS 366
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRD---YITMLGSLVKIGELEEAEKMLEEWE 341
LIS YA G DE M+ L+ KK + D Y T+L K G+ + A K+ EE
Sbjct: 367 LISAYARDGLLDEAME---LKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMR 423
Query: 342 LS----------------------------------CYCY-DFRVPNIILLGYSQKGMIE 366
++ C C D N +L + Q GM
Sbjct: 424 VAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDS 483
Query: 367 KADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSL 426
+ V KE+ + G P ++++ + + Y+ ++A + L + P S
Sbjct: 484 EVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRML-----DAGVTPDLST 538
Query: 427 VSSILDWLGDNRDVEEVEAFVSSLKIKVQKRN--MYHALTEAHIRSGQEVD 475
+++L L E+ E ++ +K K N Y +L A+ +G+EV+
Sbjct: 539 YNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYA-NGKEVE 588
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 84/391 (21%), Positives = 177/391 (45%), Gaps = 18/391 (4%)
Query: 63 EGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLES 122
+G I +I S R++ A+ V + + +G ++ + V L++ GK+ G+
Sbjct: 214 DGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKM-GMPW 272
Query: 123 AET--YFNSLNDEDKVDKLY--GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGI 178
++ +S+ LY L++ R L +E+ + ++MK G + YN +
Sbjct: 273 SKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNAL 332
Query: 179 MCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSH 238
+ +Y + + + +VL +M+ +G P +Y I++Y AR L L+ +
Sbjct: 333 LDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAY-ARDGLLDEAMELKSQMVKKG 391
Query: 239 ISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEM 298
I D TY+T+ + + G + A+ ++ + + +N LI + + GN EM
Sbjct: 392 IKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMR-VAGCQPNICTFNALIKMHGNRGNFVEM 450
Query: 299 MKFWGLQKI-KCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL 357
MK + KI +C + + T+L + G E + +E + + + + N ++
Sbjct: 451 MKVFEEIKICECVPDI-VTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLIS 509
Query: 358 GYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEEN 417
YS+ G ++A A+ + ++ G TP ++++ + A A E++ + + E
Sbjct: 510 AYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEM------- 562
Query: 418 KFWRPKPSLVS--SILDWLGDNRDVEEVEAF 446
K R KP+ ++ S+L + ++VE + A
Sbjct: 563 KDGRCKPNELTYCSLLHAYANGKEVERMSAL 593
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 141/349 (40%), Gaps = 25/349 (7%)
Query: 38 NLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSG 97
N+Y + +G P + ++D G +I R ++ A +V E M
Sbjct: 263 NVYGK---MGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKA 319
Query: 98 QGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDE 155
G + + LD+ GK R A + + Y +L++ Y R+GL+DE
Sbjct: 320 AGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDE 379
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
++ L +M + G Y ++ + TG+ + V +M+ G P+ ++ I
Sbjct: 380 AMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIK 439
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDI-VS 274
+G R M V +E++ + D T++T+ + G+ + K+ +
Sbjct: 440 MHGNRGNFVEMMKVFEEIKICECVP-DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV 498
Query: 275 KSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
+D +N LIS Y+ G D+ M + Y +L +L + G E++E
Sbjct: 499 PERDT--FNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSE 556
Query: 335 KMLEEW--------ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
K+L E EL+ YC +L Y+ +E+ A+ +EI
Sbjct: 557 KVLAEMKDGRCKPNELT-YCS-------LLHAYANGKEVERMSALAEEI 597
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 166/399 (41%), Gaps = 28/399 (7%)
Query: 89 LQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGL------ESAETYFNSL-NDEDKVDKLYG 141
LQ+ E S GL F+ +V D++G ++GL E A F + N ED L
Sbjct: 129 LQLFE-TSSDGLNFT--SDSVSFDILGIIKGLVFYKKNELALCVFYFVRNREDFASILSN 185
Query: 142 ALLNCYV----REGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
+++ + +EG + SL+ ++ G Y ++ Y + G++ + V
Sbjct: 186 SVVAVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKK 245
Query: 198 MKENGVPPDNFSYRICINSYGARS-ELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
++E G P +Y + +N YG S + ++ M+S S ++ D TY+T+ +
Sbjct: 246 LEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKS-SGVAPDLYTYNTLISSCRRG 304
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
L E+A ++ + S D + YN L+ Y E M+ +
Sbjct: 305 SLYEEAAEVFEEMK-AAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVT 363
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y +++ + + G L+EA ++ + D +L G+ + G + A V +E+
Sbjct: 364 YNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMR 423
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVS--SILDWL 434
G P +++ + + ++ N E + V EE K P +V+ ++L
Sbjct: 424 VAGCQPNICTFNALIKMHGNRGN-------FVEMMKVFEEIKICECVPDIVTWNTLLAVF 476
Query: 435 GDNRDVEEVEAFVSSLKIK--VQKRNMYHALTEAHIRSG 471
G N EV +K V +R+ ++ L A+ R G
Sbjct: 477 GQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCG 515
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/325 (19%), Positives = 137/325 (42%), Gaps = 33/325 (10%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ L++ Y R G D+++++ ++M + G YN ++ G E+ VL +MK
Sbjct: 504 FNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMK 563
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ P+ +Y +++Y E+ M + +E+ YS + + LK
Sbjct: 564 DGRCKPNELTYCSLLHAYANGKEVERMSALAEEI------------YSGIIEPQAVL-LK 610
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI- 318
++Y K D++++++ A + + M+ +G +++ K ++I
Sbjct: 611 TLVLVYSKS--DLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIK 668
Query: 319 --------TMLGSLV----KIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIE 366
T SL+ + E++E +L E D N ++ Y + G ++
Sbjct: 669 DSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMK 728
Query: 367 KADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSL 426
+A + E+ G P +++ A YA + +A + +K + E K P +
Sbjct: 729 EASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVK--YMIKNECK---PNQNT 783
Query: 427 VSSILDWLGDNRDVEEVEAFVSSLK 451
+S++DW +E +F+S+L+
Sbjct: 784 YNSLIDWFCKLNRRDEANSFISNLR 808
>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 173/415 (41%), Gaps = 56/415 (13%)
Query: 108 AVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYG--ALLNCYVREGLVDESLSLMQKMKE 165
AV ++++GK + A + N+L+ + +Y +L+ V G E++ + +KM+E
Sbjct: 2 AVIINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEE 61
Query: 166 MGSFGSALNYNGIMCLYTNTGQH-EKIPDVLLDMKENGVPPDNFSYRICINSYGARSELS 224
G + + YN I+ +Y G KI + MK G+ PD ++Y I S
Sbjct: 62 EGCKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYE 121
Query: 225 SMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNH 284
V ++M+S + D TY+T+ + Y + ++AI L++ E + S + YN
Sbjct: 122 EAAAVFEDMKSMGFVP-DKVTYNTLLDVYGKSRRIKEAIEVLREME-VNGCSPSIVTYNS 179
Query: 285 LISHYASLG----------------------------------NKDE--MMKFWGLQKIK 308
LIS YA G KDE M F ++
Sbjct: 180 LISAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAG 239
Query: 309 CKKQLNRDYITMLGSLVKI----GELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGM 364
CK I +L+K+ G+ E K+ EE ++ C D N +L + Q GM
Sbjct: 240 CKPN-----ICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGM 294
Query: 365 IEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKP 424
+ V KE+ + G P ++++ + + Y+ + ++A K L + P
Sbjct: 295 DSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRML-----DTGITPDL 349
Query: 425 SLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRN-MYHALTEAHIRSGQEVDGLL 478
S +++L L E+ E ++ ++ + K N + H +G+E+ +L
Sbjct: 350 STYNAVLAALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRML 404
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 134/314 (42%), Gaps = 23/314 (7%)
Query: 38 NLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSG 97
N+Y + +G P +T + + G E +I R ++ A V E M
Sbjct: 76 NVYGK---MGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEEAAAVFEDMKS 132
Query: 98 QGLAFSVHDHAVQLDLIGKVRGLESAETYFNSL--NDEDKVDKLYGALLNCYVREGLVDE 155
G + LD+ GK R ++ A + N Y +L++ Y R+GL++E
Sbjct: 133 MGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLEE 192
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
++ L +M E G Y ++ + TG+ E V +M+ G P+ ++ I
Sbjct: 193 AMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIK 252
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDI-VS 274
+G R + + M V +E++ + D T++T+ + G+ + K+ + +
Sbjct: 253 MHGNRGKFAEMMKVFEEIKICCCVP-DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFV 311
Query: 275 KSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR-------DYITMLGSLVKI 327
+D YN LIS Y+ G+ D+ M + K+ L+ Y +L +L +
Sbjct: 312 PERDT--YNTLISAYSRCGSFDQAMAMY-------KRMLDTGITPDLSTYNAVLAALARG 362
Query: 328 GELEEAEKMLEEWE 341
G E++EK+L E +
Sbjct: 363 GLWEQSEKILAEMQ 376
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 4/161 (2%)
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
A++ Y R +V ++ ++ MKE G S YN +M +++ + E+ +VL ++
Sbjct: 459 AMIAIYGRRQMVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAK 518
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
G+ PD SY I +Y + ++ EM +S + D TY+T Y + E+
Sbjct: 519 GIKPDIISYNTVIFAYCRNGRMKEASHIFSEMR-ESGLIPDVITYNTFVASYAADSMFEE 577
Query: 262 AIIYLKKCEDIVSKSK-DALGYNHLISHYASLGNKDEMMKF 301
AI + C I K + YN +I Y L +D+ +KF
Sbjct: 578 AIDVV--CYMIKHGCKPNQNTYNSVIDGYCKLNRRDDAIKF 616
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 36/78 (46%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ++ Y R G + E+ + +M+E G + YN + Y E+ DV+ M
Sbjct: 527 YNTVIFAYCRNGRMKEASHIFSEMRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYMI 586
Query: 200 ENGVPPDNFSYRICINSY 217
++G P+ +Y I+ Y
Sbjct: 587 KHGCKPNQNTYNSVIDGY 604
>gi|357166784|ref|XP_003580849.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Brachypodium distachyon]
Length = 904
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 147/322 (45%), Gaps = 10/322 (3%)
Query: 89 LQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFN----SLNDEDKVDKLYGALL 144
L E M +G+ ++ +++ + K+ +SA+ F L D + + +Y ++
Sbjct: 324 LSCVEEMKAEGIELTIVTYSIIIAGFAKINDAQSADNLFKEAKAKLGDLNGI--IYSNII 381
Query: 145 NCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVP 204
+ + + G +D + L+++M+E G Y+ +M YT +K V +KE
Sbjct: 382 HAHCQSGNMDRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFT 441
Query: 205 PDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAII 264
P SY IN Y +++ + +EMES I + TYS + + +I L + A
Sbjct: 442 PSIISYGCLINLYIKIGKVTKAIAISKEMESYG-IKHNNKTYSMLISGFI--HLHDFANA 498
Query: 265 YLKKCEDIVSK-SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGS 323
+ E + S D YN LI + +GN D ++ + + + NR + ++
Sbjct: 499 FSIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEG 558
Query: 324 LVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPT 383
G+++ A +L+ S N ++ G +K +E+A +VL ++ G TP
Sbjct: 559 FAVAGDMKRALNILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPN 618
Query: 384 PNSWSIIAAGYADKNNMEKAFE 405
++++II GYA ++ KAFE
Sbjct: 619 EHTYTIIMRGYAANGDIGKAFE 640
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 125/290 (43%), Gaps = 11/290 (3%)
Query: 29 RAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHA 88
RA +P+ + GD +L +LD G + + +I L + + + A
Sbjct: 550 RAFRPIIEG-----FAVAGDMKRALN-ILDLMRRSGCAPTVMTYNALIHGLIKKNQVERA 603
Query: 89 LQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED-KVD-KLYGALLNC 146
+ V MS G+ + H + + + + A YF + + K+D +Y LL
Sbjct: 604 VSVLNKMSIAGITPNEHTYTIIMRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRA 663
Query: 147 YVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPD 206
+ G + +L++ ++M + YN ++ + G + D++ MKE+GVPP+
Sbjct: 664 CCKSGRMQSALAVTREMSTQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPN 723
Query: 207 NFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYL 266
+Y IN+ ++ + V++EM + + + TY+T+ + A L ++A+
Sbjct: 724 IHTYTSYINACCKAGDMQRAQKVIEEM-ADVGLKPNLKTYTTLIKGWAKASLPDRALKSF 782
Query: 267 KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
++ + + D Y+ L++ S E + G+ I C++ D
Sbjct: 783 EEMK-LAGLKPDEAAYHCLVTSLLSRATVMEGSTYTGILSI-CREMFEND 830
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 127/276 (46%), Gaps = 8/276 (2%)
Query: 137 DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
+K Y L++ ++ + S+ ++M + G YN ++ + G ++ +L
Sbjct: 479 NKTYSMLISGFIHLHDFANAFSIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILE 538
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
M++ + P N ++R I + ++ N+L M +S + TY+ + + I
Sbjct: 539 KMQKERMQPSNRAFRPIIEGFAVAGDMKRALNILDLMR-RSGCAPTVMTYNALIHGLIKK 597
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
E+A+ L K I + + Y ++ YA+ G+ + +++ KIK + L D
Sbjct: 598 NQVERAVSVLNKM-SIAGITPNEHTYTIIMRGYAANGDIGKAFEYF--TKIK-EGGLKLD 653
Query: 317 ---YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
Y T+L + K G ++ A + E + V NI++ G++++G + +A ++K
Sbjct: 654 VYIYETLLRACCKSGRMQSALAVTREMSTQKIARNTFVYNILIDGWARRGDVWEAADLMK 713
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
++ + G P ++++ +M++A + ++E
Sbjct: 714 QMKEDGVPPNIHTYTSYINACCKAGDMQRAQKVIEE 749
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 47/286 (16%), Positives = 128/286 (44%), Gaps = 6/286 (2%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+G ++ Y + G + + + M+ G +A + ++ Y + + +MK
Sbjct: 272 FGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGVLSCVEEMK 331
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G+ +Y I I + ++ S +N+ +E +++ ++ YS + + + +G
Sbjct: 332 AEGIELTIVTYSIIIAGFAKINDAQSADNLFKEAKAKLG-DLNGIIYSNIIHAHCQSGNM 390
Query: 260 EKAIIYLKKCE-DIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
++A +++ E D + DA Y+ ++ Y + ++ + + + K C Y
Sbjct: 391 DRAEELVREMEEDGIDAPIDA--YHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYG 448
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
++ +KIG++ +A + +E E ++ + ++++ G+ A ++ +E++K
Sbjct: 449 CLINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLKS 508
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAFECMK--EALAVHEENKFWRP 422
G P ++++ + NM++A ++ + + N+ +RP
Sbjct: 509 GLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRP 554
>gi|255660888|gb|ACU25613.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 481
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 94/432 (21%), Positives = 186/432 (43%), Gaps = 32/432 (7%)
Query: 79 LRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAETYFNSLN------ 131
L S K +HALQ W+ L + H ++++G+ L A +
Sbjct: 19 LHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEW 78
Query: 132 DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
DED ++ +++ Y +EG+V ES+ + QKM+E+G + +YN + + G++
Sbjct: 79 DED----MWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNXLFKVILRRGRYMMA 134
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
M G+ P ++ + I + ++ + ++M+S+ IS D TY+T+ N
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR-EISPDVVTYNTMIN 193
Query: 252 -YYIIAGLKEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
YY + ++E +++ K +I + Y LI Y S+ D+ ++ K
Sbjct: 194 GYYRVKKMEEAEKYFVEMKGRNI---EPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFG 250
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYC--YDFRVPNIILLGYSQKGMIEK 367
K Y T+L L ++ EA +L+E + Y D + ++ + + G ++
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARVILKEM-MDKYLAPTDNSIFMRLISSHCKSGNLDA 309
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPK---- 423
A VLK +++ + + + +KA + + + + E++ RP+
Sbjct: 310 AADVLKAMIRLSVPTEAGHYGXLIENFCKXGQYDKAVKLLDKLI---EKDIILRPQSTLH 366
Query: 424 --PSLVSSILDWLGDNRDVEEVEAFVSSL-KIKVQKRNMYHALTEAHIRSGQEVDG--LL 478
PS + ++++L +N + E V L K+ VQ + L H + G LL
Sbjct: 367 LEPSAYNPMIEYLCNNGQXXKAETLVRQLXKLGVQDXTALNTLIRGHSQEGSPDSAFELL 426
Query: 479 ESMKADDIDEDK 490
+ M +D +K
Sbjct: 427 KIMLRRKVDSEK 438
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 139/328 (42%), Gaps = 54/328 (16%)
Query: 116 KVRGLESAETYFNSL---NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
+V+ +E AE YF + N E V Y L+ YV VD++L L+++MK G +A
Sbjct: 197 RVKKMEEAEKYFVEMKGRNIEPTV-VTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNA 255
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP-DNFSYRICINSYGARSELSSMENVLQ 231
+ Y+ ++ N + + +L +M + + P DN + I+S+ L + +VL+
Sbjct: 256 ITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLK 315
Query: 232 EMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC--EDIVSKSKDAL-----GYNH 284
M S + + G Y + + G +KA+ L K +DI+ + + L YN
Sbjct: 316 AMIRLS-VPTEAGHYGXLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNP 374
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSC 344
+I + + G Q K + T++ L K+G
Sbjct: 375 MIEYLCNNG-----------QXXKAE--------TLVRQLXKLG---------------- 399
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
D N ++ G+SQ+G + A +LK ++++ ++++ + Y KN A
Sbjct: 400 -VQDXTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDA- 457
Query: 405 ECMKEALAVHEENKFWRPKPSLVSSILD 432
K AL EN P +L S+++
Sbjct: 458 ---KAALDSMIENDHL-PDSALFRSVME 481
>gi|115461420|ref|NP_001054310.1| Os04g0684500 [Oryza sativa Japonica Group]
gi|113565881|dbj|BAF16224.1| Os04g0684500 [Oryza sativa Japonica Group]
Length = 901
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 103/438 (23%), Positives = 187/438 (42%), Gaps = 50/438 (11%)
Query: 86 KHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYF-------NSLNDEDKVDK 138
+ AL E M +GL ++ +++ + K+ +SA+ F +SLN
Sbjct: 316 RGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNG-----I 370
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+Y +++ + + G ++ + L+++M+E G Y+ +M YT K V +
Sbjct: 371 IYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERL 430
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
KE G P SY +N Y +++ ++ +EMES I + TYS + N +I L
Sbjct: 431 KECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMES-CGIKHNNKTYSMLINGFI--HL 487
Query: 259 KEKAIIYLKKCEDIVSK-SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
+ A + E + S D YN LI + +GN D + + + + NR +
Sbjct: 488 HDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAF 547
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
++ G+++ A L+ S N ++ G +K +++A +VL ++
Sbjct: 548 RPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSI 607
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAFE-----------------------C-----MKE 409
G TP ++++II GYA ++ KAFE C M+
Sbjct: 608 AGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQS 667
Query: 410 ALAVHEENKFWR-PKPSLVSSIL-DWLGDNRDVEEVEAFVSSLKIKVQKRNM--YHALTE 465
ALAV E F + P+ + + +IL D DV E E + +K N+ Y +
Sbjct: 668 ALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYIN 727
Query: 466 AHIRSG--QEVDGLLESM 481
A ++G Q + ++E M
Sbjct: 728 ACCKAGDMQRAEKVIEEM 745
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 135/318 (42%), Gaps = 55/318 (17%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMG-------------------SFGSALN------ 174
YG LLN YV+ G V ++LS+ ++M+ G F +A
Sbjct: 442 YGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEML 501
Query: 175 ----------YNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELS 224
YN ++ + G ++ +L M++ + P N ++R I Y ++
Sbjct: 502 RSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMK 561
Query: 225 SMENVLQEMESQSHISMDWGTYSTVANY-YIIAGLKEK-----AIIYLKKCEDIVSKSKD 278
S + L M G TV Y +I GL K A+ L K I + +
Sbjct: 562 SALDTLDLMRRS-------GCVPTVMTYNALIHGLVRKHKVQRAVSVLDKM-SIAGITPN 613
Query: 279 ALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD---YITMLGSLVKIGELEEAEK 335
Y ++ YA+ G+ + +++ KIK + L D Y T+L + K G ++ A
Sbjct: 614 EHTYTIIMRGYAASGDIGKAFEYF--TKIK-ESGLKLDVYIYETLLRACCKSGRMQSALA 670
Query: 336 MLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYA 395
+ E + + NI++ G++++G + +A+ ++K++ + G P ++++
Sbjct: 671 VTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACC 730
Query: 396 DKNNMEKAFECMKEALAV 413
+M++A + ++E + V
Sbjct: 731 KAGDMQRAEKVIEEMVDV 748
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 111/253 (43%), Gaps = 5/253 (1%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I L + + + A+ V + MS G+ + H + + + + A YF + +
Sbjct: 585 LIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESG 644
Query: 135 -KVD-KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
K+D +Y LL + G + +L++ ++M + YN ++ + G +
Sbjct: 645 LKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAE 704
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
D++ MKE+GVPP+ +Y IN+ ++ E V++EM + + TY+T+
Sbjct: 705 DLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVG-LKPNVKTYTTLIKG 763
Query: 253 YIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQ 312
+ L ++A+ ++ + + D Y+ L++ S E + G+ + C++
Sbjct: 764 WARVSLPDRALKCFEEMK-LAGLKPDEASYHCLVTSLLSRATVMEGSTYTGIISV-CREM 821
Query: 313 LNRDYITMLGSLV 325
D L + V
Sbjct: 822 SENDLTVDLRTAV 834
>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 647
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 153/357 (42%), Gaps = 19/357 (5%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +L++ G++D S+ K KEMG + + N ++ + N G E++ V MK
Sbjct: 147 YVSLIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVWRRMK 206
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
ENG+ P FSY +N + S E V + ME+ I D TY+T+ Y G
Sbjct: 207 ENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMEN-GKIGPDVVTYNTMIKGYCEVGKT 265
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
KA LK E + + + D + Y LI + G+ D + + K + Y
Sbjct: 266 RKAFEKLKAME-LRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHVYSL 324
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
++G L K G+ E + E + + ++ ++ G + +A + K + K+G
Sbjct: 325 VIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEG 384
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFE----CMKEALAVHEENKFWRPKPSLVSSILDWLG 435
P ++ +I +++A E C + +AV+ SS++D LG
Sbjct: 385 LEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNA---------MFYSSLIDGLG 435
Query: 436 DNRDVEEVEAFVSSLKIKVQKRN--MYHALTEAHIRSGQ--EVDGLLESMKADDIDE 488
+ V+E E + K + Y+AL +A + G+ E L + M+ D D+
Sbjct: 436 KSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDGCDQ 492
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 103/243 (42%), Gaps = 9/243 (3%)
Query: 63 EGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLES 122
EG + E+ ++ L R AL+ E+ SG+G+A + ++ +D +GK ++
Sbjct: 383 EGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDE 442
Query: 123 AETYFNSLNDEDKVDK--LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMC 180
AE F + + Y AL++ + G +DE+L+L ++M+ G + Y ++
Sbjct: 443 AERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTILIT 502
Query: 181 LYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHIS 240
++E+ + M + G+ P ++R +++ +L EM I
Sbjct: 503 GLFREHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSGKVARACKILDEMAPMGVIP 562
Query: 241 MDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALG--YNHLISHYASLGNKDEM 298
+ + N AG ++A K + IV + ++ G LI+ GN D
Sbjct: 563 ET--AFDDMINILCKAGRIKEAC---KLADGIVDRGREIPGRVRTVLINALRKAGNADLA 617
Query: 299 MKF 301
+K
Sbjct: 618 LKL 620
>gi|356540307|ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 804
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 171/377 (45%), Gaps = 14/377 (3%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGL--ESAETYFNSLND 132
+I S R++ A+ + M G ++ + V L++ GK+ G+ + ++
Sbjct: 199 LINAYSSSGRYRDAVNLFNKMQQDGCNPTLITYNVVLNVYGKM-GMPWSNVTALVEAMRS 257
Query: 133 EDKVDKLY--GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEK 190
LY L++C R L +E++ L Q+MK G + YN ++ ++ + + ++
Sbjct: 258 RGVAPDLYTYNTLISCCRRGSLYEEAVHLFQQMKLEGFTPDKVTYNALLDVFGKSRRPQE 317
Query: 191 IPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVA 250
VL +M+ NG P + +Y I++Y L ++ +M + I D TY+T+
Sbjct: 318 AMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKG-IKPDVFTYTTLL 376
Query: 251 NYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMK-FWGLQKIKC 309
+ + AG + AI + + K + +N LI + + G EMMK F ++ C
Sbjct: 377 SGFEKAGKDDFAIQVFLEMRAVGCK-PNICTFNALIKMHGNRGKFAEMMKVFDDIKLCNC 435
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKAD 369
+ + T+L + G + + +E + + + + N ++ YS+ G ++A
Sbjct: 436 SPDI-VTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAYSRCGSFDQAM 494
Query: 370 AVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSS 429
AV K +++ G P ++++ + A A E++ + + E E+ +P SS
Sbjct: 495 AVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEM-----EDGRCKPNELSYSS 549
Query: 430 ILDWLGDNRDVEEVEAF 446
+L + +++E + AF
Sbjct: 550 LLHAYANGKEIERMNAF 566
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 122/293 (41%), Gaps = 43/293 (14%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ L++ Y R G D+++++ + M E G YN ++ G E+ VL +M+
Sbjct: 477 FNTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEME 536
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ P+ SY +++Y E+ M +E+ S S T++ + ++ K
Sbjct: 537 DGRCKPNELSYSSLLHAYANGKEIERMNAFAEEIYSGS-----VETHAVLLKTLVLVNSK 591
Query: 260 -------EKAIIYLKK---CEDI---------------VSKSKDALGYNHLISHYASLGN 294
E+A + L++ DI V+K+ + L + H SL
Sbjct: 592 SDLLIETERAFLELRRRGISPDITTLNAMLSIYGRKQMVAKAHEILNFMHETRFTPSLTT 651
Query: 295 KDEMMKFWG----LQKIK------CKKQLNRD---YITMLGSLVKIGELEEAEKMLEEWE 341
+ +M + QK + +K + D Y T++ + + G ++EA ++ E +
Sbjct: 652 YNSLMYMYSRSENFQKSEEILREVLEKGMKPDRISYNTVIYAYCRNGRMKEASRIFSEMK 711
Query: 342 LSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGY 394
S D N + Y+ M +A V++ ++K+G P N+++ I Y
Sbjct: 712 DSALVPDVVTYNTFIATYAADSMFAEAIDVVRYMIKQGCKPDQNTYNSIVDWY 764
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 2/160 (1%)
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
A+L+ Y R+ +V ++ ++ M E S YN +M +Y+ + +K ++L ++ E
Sbjct: 619 AMLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYSRSENFQKSEEILREVLEK 678
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
G+ PD SY I +Y + + EM+ + + D TY+T Y + +
Sbjct: 679 GMKPDRISYNTVIYAYCRNGRMKEASRIFSEMKDSALVP-DVVTYNTFIATYAADSMFAE 737
Query: 262 AIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKF 301
AI ++ K D YN ++ Y L + E F
Sbjct: 738 AIDVVRYMIKQGCK-PDQNTYNSIVDWYCKLDQRHEANSF 776
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/301 (19%), Positives = 123/301 (40%), Gaps = 12/301 (3%)
Query: 175 YNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEME 234
Y ++ Y+++G++ ++ M+++G P +Y + +N YG S L E
Sbjct: 196 YTCLINAYSSSGRYRDAVNLFNKMQQDGCNPTLITYNVVLNVYGKMGMPWSNVTALVEAM 255
Query: 235 SQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGN 294
++ D TY+T+ + L E+A ++L + + + D + YN L+ +
Sbjct: 256 RSRGVAPDLYTYNTLISCCRRGSLYEEA-VHLFQQMKLEGFTPDKVTYNALLDVFGKSRR 314
Query: 295 KDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNI 354
E MK + + Y +++ + K G LEEA + + D
Sbjct: 315 PQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKGIKPDVFTYTT 374
Query: 355 ILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVH 414
+L G+ + G + A V E+ G P +++ + + ++ E + V
Sbjct: 375 LLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGK-------FAEMMKVF 427
Query: 415 EENKFWRPKPSLVS--SILDWLGDNRDVEEVEAFVSSLKIK--VQKRNMYHALTEAHIRS 470
++ K P +V+ ++L G N +V +K V +R+ ++ L A+ R
Sbjct: 428 DDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAYSRC 487
Query: 471 G 471
G
Sbjct: 488 G 488
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 152/341 (44%), Gaps = 14/341 (4%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I L + AL++ + M GL +V + +D + K + LE A + F ++D+
Sbjct: 410 LIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKV 469
Query: 135 KVDK--LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+ +L++ + G VD++ SL +KM + G A+ Y ++ + G+ E
Sbjct: 470 CTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGH 529
Query: 193 DVLLDMKENGVPPDNF---SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTV 249
+ +M G PD +Y C+ G E + +E+ + I D +YS +
Sbjct: 530 KIYKEMVHTGCSPDLTLINTYMDCVFKAG---ETEKGRALFREINAHGFIP-DARSYSIL 585
Query: 250 ANYYIIAGLKEKA--IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKI 307
+ + AGL + + Y K + V D YN +I + G ++ + K+
Sbjct: 586 IHGLVKAGLANETYELFYAMKEQGCV---LDTHAYNAVIDGFCKSGKVNKAYQLLEEMKV 642
Query: 308 KCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEK 367
K Y +++ L KI L+EA + EE + + + V + ++ G+ + G I++
Sbjct: 643 KGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDE 702
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMK 408
A +++E+++KG TP +W+ + + +A C +
Sbjct: 703 AYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQ 743
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 92/434 (21%), Positives = 170/434 (39%), Gaps = 59/434 (13%)
Query: 53 LTPVLDQWVLEG-QKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQL 111
L +L++ L G S + ++ V ++SRK + A + + M + + + +
Sbjct: 144 LERILEEMSLSGFGPSSNISIELVANCVKSRK-LREAFDIIQTMRKFKFRPAFSAYTILI 202
Query: 112 DLIGKVRGLESAETYFNSLND---EDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGS 168
+ +VR + F+ + + E V L+ L+ + REG VD +LSL+
Sbjct: 203 GALSEVREPDPMLILFHQMQELGYEVNV-HLFTTLIRVFAREGRVDAALSLLD------- 254
Query: 169 FGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMEN 228
+MK N + D Y +CI+ +G ++
Sbjct: 255 ----------------------------EMKSNSLDADIVLYNVCIDCFGKAGKVDMSWK 286
Query: 229 VLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISH 288
EM+S + D TY+++ A ++A+ ++ E K A YN +I
Sbjct: 287 FFHEMKSHGLMPDDV-TYTSMIGVLCKANRLDEAVELFEQLEQ-NRKVPCAYAYNTMIMG 344
Query: 289 YASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYD 348
Y S G DE QK K Y +L L K +EEA ++ EE +
Sbjct: 345 YGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV--- 401
Query: 349 FRVP--NIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFEC 406
VP NI++ ++G + A + ++ + G P + +I+ +E
Sbjct: 402 PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLE----- 456
Query: 407 MKEALAVHE--ENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL--KIKVQKRNMYHA 462
EA ++ E ++K P SS++D LG V++ + + V +Y +
Sbjct: 457 --EACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTS 514
Query: 463 LTEAHIRSGQEVDG 476
L + + G++ DG
Sbjct: 515 LIRSFFKCGRKEDG 528
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 83/416 (19%), Positives = 168/416 (40%), Gaps = 30/416 (7%)
Query: 81 SRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL- 139
S +F A + E +G SV + L +GK R +E A F + D V +
Sbjct: 347 SAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMK-RDAVPNVP 405
Query: 140 -YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
Y L++ REG ++ +L + M+ G F + L N ++ + E+ + M
Sbjct: 406 TYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGM 465
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
+ P+ ++ I+ G + ++ ++M H+ Y+++ + G
Sbjct: 466 DDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAI-VYTSLIRSFFKCGR 524
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN---- 314
KE K+ S D N + G ++ + +++N
Sbjct: 525 KEDGHKIYKEMVH-TGCSPDLTLINTYMDCVFKAGETEKGRALF--------REINAHGF 575
Query: 315 ----RDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADA 370
R Y ++ LVK G E ++ + D N ++ G+ + G + KA
Sbjct: 576 IPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQ 635
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSI 430
+L+E+ KG PT ++ + G A + +++A+ +EA ++ + + SS+
Sbjct: 636 LLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEA-----KSNGIKLNVVVYSSL 690
Query: 431 LDWLGDNRDVEEVEAFVSSLKIKVQKRNMY--HALTEAHIRSGQEVDGLL--ESMK 482
+D G ++E + L K N+Y + L +A +++ + + L+ +SMK
Sbjct: 691 IDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMK 746
>gi|255660880|gb|ACU25609.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 484
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 92/422 (21%), Positives = 182/422 (43%), Gaps = 31/422 (7%)
Query: 79 LRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAETYFNSLN------ 131
L S K +HALQ W+ L + H ++++G+ L A +
Sbjct: 19 LHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEW 78
Query: 132 DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
DED ++ +++ Y +EG+V ES+ + QKM+E+G + +YN + + G++
Sbjct: 79 DED----MWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNXLFKVILRRGRYMMA 134
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
M G+ P ++ + I + ++ + ++M+S+ IS D TY+T+ N
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR-EISPDVVTYNTMIN 193
Query: 252 -YYIIAGLKEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
YY + ++E +++ K +I + Y LI Y S+ D+ ++ K
Sbjct: 194 GYYRVKKMEEAEKYFVEMKGRNI---EPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFG 250
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYC--YDFRVPNIILLGYSQKGMIEK 367
K Y T+L L ++ EA +L+E + Y D + ++ + + G ++
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARVILKEM-MDKYLAPTDNSIFMRLISSHCKSGNLDA 309
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPK---- 423
A VLK +++ + + + +KA + + + + E++ RP+
Sbjct: 310 AADVLKAMIRLSVPTEAGHYGXLIENFCKXGQYDKAVKLLDKLI---EKDIILRPQSTLH 366
Query: 424 --PSLVSSILDWLGDNRDVEEVEAFVSSL-KIKVQKRNMYHALTEAHIRSGQEVDGLLES 480
PS + ++++L +N + E V L K+ VQ + L H + G D E
Sbjct: 367 LEPSAYNPMIEYLCNNGQAXKAETLVRQLXKLGVQDPTALNTLIRGHSQEGSP-DSAFEL 425
Query: 481 MK 482
+K
Sbjct: 426 LK 427
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 139/330 (42%), Gaps = 54/330 (16%)
Query: 116 KVRGLESAETYFNSL---NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
+V+ +E AE YF + N E V Y L+ YV VD++L L+++MK G +A
Sbjct: 197 RVKKMEEAEKYFVEMKGRNIEPTV-VTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNA 255
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP-DNFSYRICINSYGARSELSSMENVLQ 231
+ Y+ ++ N + + +L +M + + P DN + I+S+ L + +VL+
Sbjct: 256 ITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLK 315
Query: 232 EMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC--EDIVSKSKDAL-----GYNH 284
M S + + G Y + + G +KA+ L K +DI+ + + L YN
Sbjct: 316 AMIRLS-VPTEAGHYGXLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNP 374
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSC 344
+I + + G Q K + T++ L K+G
Sbjct: 375 MIEYLCNNG-----------QAXKAE--------TLVRQLXKLG---------------- 399
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
D N ++ G+SQ+G + A +LK ++++ ++++ + KN A
Sbjct: 400 -VQDPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVBSEKSAYNSLVQSXLKKNEPXDA- 457
Query: 405 ECMKEALAVHEENKFWRPKPSLVSSILDWL 434
K AL EN P +L S+++ L
Sbjct: 458 ---KAALDSMIENDHL-PDSALFRSVMESL 483
>gi|255660866|gb|ACU25602.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 484
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 93/431 (21%), Positives = 184/431 (42%), Gaps = 30/431 (6%)
Query: 79 LRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAETYFNSLN------ 131
L S K +HALQ W+ L + H ++++G+ L A +
Sbjct: 19 LHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEW 78
Query: 132 DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
DED ++ +++ Y +EG+V ES+ + QKM+E+G + +YN + + G++
Sbjct: 79 DED----MWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMA 134
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
M G+ P ++ + I + ++ + ++M+S+ IS D TY+T+ N
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR-EISPDVVTYNTMIN 193
Query: 252 -YYIIAGLKEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
YY + ++E +++ K +I + Y LI Y S+ D+ ++ K
Sbjct: 194 GYYRVKKMEEAEKYFVEMKGRNI---EPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFG 250
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEE-WELSCYCYDFRVPNIILLGYSQKGMIEKA 368
K Y T+L L ++ EA +L+E + D + ++ + + G + A
Sbjct: 251 IKPNTITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNPDAA 310
Query: 369 DAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPK----- 423
VLK +++ + + + +KA + + + + E++ RP+
Sbjct: 311 ADVLKAMIRLSVPTEAGHYGXLIXNFCKVGQYDKAVKLLDKLI---EKDIILRPQSTLHL 367
Query: 424 -PSLVSSILDWLGDNRDVEEVEAFVSSL-KIKVQKRNMYHALTEAHIRSGQEVDG--LLE 479
PS + ++++L +N + E V L K+ VQ + L H + G LL+
Sbjct: 368 EPSAYNPMIEYLCNNGQAXKAETLVRQLXKLGVQDPTALNTLIRGHSQEGSPDSAFELLK 427
Query: 480 SMKADDIDEDK 490
M +D +K
Sbjct: 428 IMLRRKVDSEK 438
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 84/392 (21%), Positives = 164/392 (41%), Gaps = 34/392 (8%)
Query: 65 QKISELELQRVIRQLRS-------RKRFKHALQVSEWMSGQGLAFSVHDHAVQL---DLI 114
QK+ EL ++R I+ + R R+ A + M +G+ + H V + L
Sbjct: 104 QKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLS 163
Query: 115 GKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
GKV E+A +F + + + Y ++N Y R ++E+ +MK +
Sbjct: 164 GKV---ETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTV 220
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQE 232
+ Y ++ Y + Q + ++ +MK G+ P+ +Y + ++S +L+E
Sbjct: 221 VTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNTITYSTLLPGLCNAEKMSEARVILKE 280
Query: 233 MESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASL 292
M + D + + + + +G + A LK + S +A Y LI ++ +
Sbjct: 281 MMDKYLAPTDNSIFMRLISSHCKSGNPDAAADVLKAMIRL-SVPTEAGHYGXLIXNFCKV 339
Query: 293 GNKDEMMKFWGLQKIKCKKQLNRD----------YITMLGSLVKIGELEEAEKMLEEWEL 342
G D+ +K L K+ K + R Y M+ L G+ +AE ++ +
Sbjct: 340 GQYDKAVKL--LDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQAXKAETLVRQLX- 396
Query: 343 SCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEK 402
D N ++ G+SQ+G + A +LK ++++ ++++ + Y KN
Sbjct: 397 KLGVQDPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXD 456
Query: 403 AFECMKEALAVHEENKFWRPKPSLVSSILDWL 434
A K AL EN P +L S+++ L
Sbjct: 457 A----KAALDSMIENDHL-PDSALFRSVMESL 483
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 95/452 (21%), Positives = 189/452 (41%), Gaps = 28/452 (6%)
Query: 29 RAVKP--VARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFK 86
+ +KP V L S + G D ++ D+ V G K + +I+ R +F
Sbjct: 342 KGIKPDVVTYTTLISGLDRAGKIDAAIVE-YDEMVRNGCKPNLCTYNALIKMHGVRGKFP 400
Query: 87 HALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLES-AETYFNSLNDEDKVDK--LYGAL 143
+ V + + G + L + G+ GL+S F + + + Y +L
Sbjct: 401 EMMAVFDELRSAGFVPDIVTWNTLLAVFGQ-NGLDSEVSGVFKEMKKAGYIPERDTYVSL 459
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
++ Y R GL D ++ + ++M E G + YN ++ G+ E+ + +M+E
Sbjct: 460 ISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDC 519
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL--KEK 261
PD +SY +++Y L M+ + ++ S+ +W + V + L EK
Sbjct: 520 KPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEK 579
Query: 262 AIIYL--KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
A + L K+C S D N ++S Y ++ K L K Y +
Sbjct: 580 AFLELRQKRC------SLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNS 633
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
++ ++G+ E+ E +L E + S D N ++ Y +KG +++A + E+ G
Sbjct: 634 LMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSG 693
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRD 439
P +++I Y + E+A E ++ + + +P +SI++ N
Sbjct: 694 LKPDVVTYNIFVKSYVSNSMFEEAIELVRYMV-----TQGCKPNERTYNSIVEGYCRNGK 748
Query: 440 VEEVEAFVSSLK------IKVQKRNMYHALTE 465
+ + + FVS+L K +++N++ L +
Sbjct: 749 LTDAKIFVSNLPQLHPGYSKQEQQNLFEVLAK 780
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 174/404 (43%), Gaps = 14/404 (3%)
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGK--VRGLESAETYFNSLNDEDKVDK-LY 140
RF+ A+ V M G+ ++ + V L + K V E E + D+ Y
Sbjct: 187 RFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTY 246
Query: 141 GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKE 200
L++C R L E+ + +MK G + +N ++ +Y +H++ +V+ +M+
Sbjct: 247 NTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMER 306
Query: 201 NGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKE 260
G PP +Y I+SY L + QEME + I D TY+T+ + AG +
Sbjct: 307 VGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKG-IKPDVVTYTTLISGLDRAGKID 365
Query: 261 KAIIYLKKCEDIVSKSKDAL-GYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
AI+ E + + K L YN LI + G EMM + + + T
Sbjct: 366 AAIVEYD--EMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNT 423
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
+L + G E + +E + + Y + ++ YS+ G+ + A + K +++ G
Sbjct: 424 LLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAG 483
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRD 439
P ++++ + + A E+A E L E + +P SS+L + +
Sbjct: 484 IYPDVSTYNAVLSALARGGRWEQA-----EKLFAEMEERDCKPDEYSYSSLLHAYANAKR 538
Query: 440 VEEVEAFVSSLKIKVQKRNMYHALTEAHIRSGQEVDGLLESMKA 483
+++++A S I ++ ++ L + + +V+ L E+ KA
Sbjct: 539 LDKMKAL--SDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKA 580
>gi|125592120|gb|EAZ32470.1| hypothetical protein OsJ_16686 [Oryza sativa Japonica Group]
Length = 879
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 103/438 (23%), Positives = 187/438 (42%), Gaps = 50/438 (11%)
Query: 86 KHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYF-------NSLNDEDKVDK 138
+ AL E M +GL ++ +++ + K+ +SA+ F +SLN
Sbjct: 294 RGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNG-----I 348
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+Y +++ + + G ++ + L+++M+E G Y+ +M YT K V +
Sbjct: 349 IYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERL 408
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
KE G P SY +N Y +++ ++ +EMES I + TYS + N +I L
Sbjct: 409 KECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMES-CGIKHNNKTYSMLINGFI--HL 465
Query: 259 KEKAIIYLKKCEDIVSK-SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
+ A + E + S D YN LI + +GN D + + + + NR +
Sbjct: 466 HDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAF 525
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
++ G+++ A L+ S N ++ G +K +++A +VL ++
Sbjct: 526 RPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSI 585
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAFE-----------------------C-----MKE 409
G TP ++++II GYA ++ KAFE C M+
Sbjct: 586 AGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQS 645
Query: 410 ALAVHEENKFWR-PKPSLVSSIL-DWLGDNRDVEEVEAFVSSLKIKVQKRNM--YHALTE 465
ALAV E F + P+ + + +IL D DV E E + +K N+ Y +
Sbjct: 646 ALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYIN 705
Query: 466 AHIRSG--QEVDGLLESM 481
A ++G Q + ++E M
Sbjct: 706 ACCKAGDMQRAEKVIEEM 723
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 135/318 (42%), Gaps = 55/318 (17%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMG-------------------SFGSALN------ 174
YG LLN YV+ G V ++LS+ ++M+ G F +A
Sbjct: 420 YGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEML 479
Query: 175 ----------YNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELS 224
YN ++ + G ++ +L M++ + P N ++R I Y ++
Sbjct: 480 RSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMK 539
Query: 225 SMENVLQEMESQSHISMDWGTYSTVANY-YIIAGLKEK-----AIIYLKKCEDIVSKSKD 278
S + L M G TV Y +I GL K A+ L K I + +
Sbjct: 540 SALDTLDLMRRS-------GCVPTVMTYNALIHGLVRKHKVQRAVSVLDKM-SIAGITPN 591
Query: 279 ALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD---YITMLGSLVKIGELEEAEK 335
Y ++ YA+ G+ + +++ KIK + L D Y T+L + K G ++ A
Sbjct: 592 EHTYTIIMRGYAASGDIGKAFEYF--TKIK-ESGLKLDVYIYETLLRACCKSGRMQSALA 648
Query: 336 MLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYA 395
+ E + + NI++ G++++G + +A+ ++K++ + G P ++++
Sbjct: 649 VTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACC 708
Query: 396 DKNNMEKAFECMKEALAV 413
+M++A + ++E + V
Sbjct: 709 KAGDMQRAEKVIEEMVDV 726
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 111/256 (43%), Gaps = 11/256 (4%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I L + + + A+ V + MS G+ + H + + + + A YF + +
Sbjct: 563 LIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESG 622
Query: 135 -KVD-KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
K+D +Y LL + G + +L++ ++M + YN ++ + G +
Sbjct: 623 LKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAE 682
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
D++ MKE+GVPP+ +Y IN+ ++ E V++EM + + TY+T+
Sbjct: 683 DLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVG-LKPNVKTYTTLIKG 741
Query: 253 YIIAGLKEKAIIYLKKCED---IVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
+ L ++A+ KC + + D Y+ L++ S E + G+ + C
Sbjct: 742 WARVSLPDRAL----KCFEEMKLAGLKPDEASYHCLVTSLLSRATVMEGSTYTGIISV-C 796
Query: 310 KKQLNRDYITMLGSLV 325
++ D L + V
Sbjct: 797 REMSENDLTVDLRTAV 812
>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 730
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 159/359 (44%), Gaps = 25/359 (6%)
Query: 67 ISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDH--AVQLDLIGKVRGLESAE 124
+S EL +++ L ++ AL+V WM Q + F AV L ++G+ L +
Sbjct: 44 LSSSELLSIMKGLGREGQWNKALEVFNWMR-QSVNFRPDGVTIAVMLRILGRESQLTTVS 102
Query: 125 TYFNSLNDEDKVDKLYG--ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLY 182
F SL +E +Y +L++ R E+L ++MKE G S + YN I+ LY
Sbjct: 103 RLFKSLREEGYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLY 162
Query: 183 TNTGQH-EKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISM 241
G+ E I ++ +MK G+ PD ++Y I + + S + +M+S S+ +
Sbjct: 163 GKKGRSWENILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKS-SNCTP 221
Query: 242 DWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHY--ASLGNKDEMM 299
D TY+ + + Y AG +A LK+ E + + YN L+S + A L N M
Sbjct: 222 DRVTYNALLDVYGKAGWYNEAANVLKEMES-AGCLPNIVTYNELLSAFGRAGLCNAAAEM 280
Query: 300 KFWGLQKIKCKKQLNRD---YITMLGSLVKIGELEEAEKMLEEWELS-CYCYDFRVPNII 355
K K + D Y ++L + + G++E+A ++ + S C F +I
Sbjct: 281 K-----DSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALI 335
Query: 356 LLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNME----KAFECMKEA 410
+ K E + +++ G P +W+ + + KN M K F MK+A
Sbjct: 336 GMHGKNKNFSEMM-VIFEDMQACGVEPDIVTWNSLLGAFG-KNGMYSEVLKVFRGMKKA 392
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 174/394 (44%), Gaps = 16/394 (4%)
Query: 63 EGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKV-RGLE 121
EG + +I L ++FK AL E M G S+ + V +DL GK R E
Sbjct: 111 EGYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWE 170
Query: 122 SAETYFNSLNDE--DKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM 179
+ F + + + Y + L +E+ L +MK + YN ++
Sbjct: 171 NILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALL 230
Query: 180 CLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHI 239
+Y G + + +VL +M+ G P+ +Y ++++G R+ L + +++ I
Sbjct: 231 DVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFG-RAGLCNAAAEMKDSMVSKGI 289
Query: 240 SMDWGTYSTVANYYIIAGLKEKAI-IYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEM 298
D TY+++ + Y AG E+A+ IY + + + ++ +N LI + N EM
Sbjct: 290 EPDVFTYTSLLSAYSRAGKVEQAMEIYNQM--RTSNCTPNSFTFNALIGMHGKNKNFSEM 347
Query: 299 MK-FWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL 357
M F +Q + + + ++LG+ K G E K+ + + + D NI++
Sbjct: 348 MVIFEDMQACGVEPDI-VTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIE 406
Query: 358 GYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEEN 417
Y + G ++A ++ +++ G TP +++ + A A + E A L + E N
Sbjct: 407 AYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHA------ELILDELN 460
Query: 418 K-FWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL 450
+ ++P +S+L + ++E+++ V +L
Sbjct: 461 RSSYKPNDIAYASMLHAYANGGELEKLKEMVDTL 494
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 2/159 (1%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ A+++ Y ++G++D++ ++ G + YN +M +Y G + K L +
Sbjct: 541 FNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECM 600
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G PD SY I SY +LSS + EM S I D TY+T Y+ G+
Sbjct: 601 AAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNG-IQPDSFTYNTFVGCYVNGGMF 659
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEM 298
+A+ +K K D + Y L+ Y +G +E+
Sbjct: 660 PEALSVVKHMHKTGCK-PDEVTYRTLVDAYCKIGKFEEV 697
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 80/195 (41%), Gaps = 8/195 (4%)
Query: 147 YVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPD 206
Y + LVDE+ M+ G +N ++ +Y G +K D ++ G+ PD
Sbjct: 513 YSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPD 572
Query: 207 NFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYL 266
+Y + YG E L+E + D +Y+TV Y G A
Sbjct: 573 VVTYNCLMGMYGREGMYRKCEATLRECMAAGQTP-DLVSYNTVIFSYSKHGQLSSAT--- 628
Query: 267 KKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWG-LQKIKCKKQLNRDYITMLGS 323
+ ++VS D+ YN + Y + G E + + K CK Y T++ +
Sbjct: 629 RIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPD-EVTYRTLVDA 687
Query: 324 LVKIGELEEAEKMLE 338
KIG+ EE E++L+
Sbjct: 688 YCKIGKFEEVERILK 702
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 68/365 (18%), Positives = 137/365 (37%), Gaps = 45/365 (12%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDK--LYGALLN 145
A ++ + M +G+ V + L + +E A +N + + + AL+
Sbjct: 277 AAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIG 336
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
+ + E + + + M+ G + +N ++ + G + ++ V MK+ G P
Sbjct: 337 MHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEP 396
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
D ++ I I +YG R S + + Q+ + D T++T+ G E A +
Sbjct: 397 DKATFNILIEAYG-RCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELI 455
Query: 266 LKKCEDIVSKSKDALGYNHLISHYASLGNKD---EMMKFWGLQKIKCKKQLNRDYITMLG 322
L + K D + Y ++ YA+ G + EM+ + K L + ++ +
Sbjct: 456 LDELNRSSYKPND-IAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYS 514
Query: 323 SLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKA-------------- 368
K ++EAE Y D N ++ Y +KGM++KA
Sbjct: 515 ---KCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEP 571
Query: 369 ---------------------DAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECM 407
+A L+E + G+TP S++ + Y+ + A
Sbjct: 572 DVVTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIF 631
Query: 408 KEALA 412
E ++
Sbjct: 632 HEMVS 636
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 43/96 (44%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ++ Y + G + + + +M G + YN + Y N G + V+ M
Sbjct: 611 YNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMH 670
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMES 235
+ G PD +YR +++Y + +E +L+ ++S
Sbjct: 671 KTGCKPDEVTYRTLVDAYCKIGKFEEVERILKFIKS 706
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 153/344 (44%), Gaps = 16/344 (4%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQG-LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE 133
VI SR R + AL + M +G +A + + + + KV ++ A F+ + +
Sbjct: 191 VIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTK 250
Query: 134 DKVDK---LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEK 190
+V +Y AL+ Y +G +D +L +M E G + YN ++ G+ +
Sbjct: 251 GEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTE 310
Query: 191 IPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVA 250
+++ +M G+ D F+Y I IN + + + + M + G +TV
Sbjct: 311 AYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRR-------GVRATVV 363
Query: 251 NYY-IIAGLKEKAIIYL--KKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQ 305
Y +I L +K + K ++ V + D + YN LI+ +++ GN D + G
Sbjct: 364 TYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 423
Query: 306 KIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMI 365
+ K + Y T++ L +G ++EA K+++E D N ++ GYS KG +
Sbjct: 424 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDV 483
Query: 366 EKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
+ A + E++ KG PT +++ + G + A +KE
Sbjct: 484 KDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKE 527
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 114/286 (39%), Gaps = 41/286 (14%)
Query: 58 DQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKV 117
D+ V G ++ ++ L R A ++ E M G+GLA V
Sbjct: 281 DRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFT----------- 329
Query: 118 RGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNG 177
Y L+N + +EG V ++L + + M G + + Y
Sbjct: 330 ----------------------YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTS 367
Query: 178 IMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS 237
++ + GQ ++ + + G+ PD Y INS+ + ++ EME +
Sbjct: 368 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME-KK 426
Query: 238 HISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK---SKDALGYNHLISHYASLGN 294
I+ D TY+T+ + G ++A +K D ++K D + YN LIS Y+ G+
Sbjct: 427 RIAPDDVTYNTLMRGLCLLGRVDEA----RKLIDEMTKRGIQPDLVTYNTLISGYSMKGD 482
Query: 295 KDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEW 340
+ ++ K Y ++ L K G+ ++AE M++E
Sbjct: 483 VKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEM 528
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 99/210 (47%), Gaps = 6/210 (2%)
Query: 205 PDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAII 264
P+ +Y I + +R + + ++++EM + I+ + TY TV + + G ++A+
Sbjct: 183 PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV- 241
Query: 265 YLKKCEDIVSKSK---DALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITML 321
K +++++K + +A+ YN LI Y G D + + + Y ++
Sbjct: 242 --KVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLV 299
Query: 322 GSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKT 381
+L G EA +++EE D NI++ G+ ++G ++KA + + + ++G
Sbjct: 300 HALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVR 359
Query: 382 PTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
T +++ + + K +++ + EA+
Sbjct: 360 ATVVTYTSLIYALSKKGQVQETDKLFDEAV 389
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 114/259 (44%), Gaps = 14/259 (5%)
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKE-NGVPPDNFSYRICI 214
+L L+++M +A+ YN ++ + + G+ + D++ +M+E G+ P+ ++Y I
Sbjct: 173 ALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVI 228
Query: 215 NSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKK-CEDIV 273
+ + + V EM ++ + + Y+ + Y G + A++Y + E V
Sbjct: 229 SGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGV 288
Query: 274 SKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT---MLGSLVKIGEL 330
+ + YN L+ G E + L + K L D T ++ K G +
Sbjct: 289 AMT--VATYNLLVHALFMDGRGTEA---YELVEEMGGKGLALDVFTYNILINGHCKEGNV 343
Query: 331 EEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSII 390
++A ++ E ++ S+KG +++ D + E V++G P ++ +
Sbjct: 344 KKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNAL 403
Query: 391 AAGYADKNNMEKAFECMKE 409
++ N+++AFE M E
Sbjct: 404 INSHSTSGNIDRAFEIMGE 422
Score = 38.5 bits (88), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L++ Y +G V ++L + +M G + L YN ++ GQ + +++ +M
Sbjct: 470 YNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMV 529
Query: 200 ENGVPPDNFSY 210
ENG+ PD+ +Y
Sbjct: 530 ENGITPDDSTY 540
>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
Length = 413
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/365 (20%), Positives = 151/365 (41%), Gaps = 52/365 (14%)
Query: 79 LRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKV-RGLESAETYFNSLNDEDKVD 137
LR +R H M+ V ++ +D +GK R ++ E + N D
Sbjct: 98 LRQARRLLH------HMTAHAFVLDVFTYSYLMDALGKAGRAAKALEVFSNMQKAGCMPD 151
Query: 138 KL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
+ Y L++C ++G VDE+L L++ M G YN ++ + ++ G++EK
Sbjct: 152 TVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFG 211
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
MK PD +Y +N ++ EM++ + D T+ T+ + A
Sbjct: 212 MMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMP-DLTTFGTLIDTLAKA 270
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
G + ED + +S + H+ + Y
Sbjct: 271 G----------RMEDALEQSARLVKMGHVPNSYI-------------------------- 294
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCY-DFRVPNIILLGYSQKGMIEKADAVLKEI 375
Y ++ + G++++ ++ ++ + C C+ D I++LG+S++G A +L+E+
Sbjct: 295 YNALISGFCRSGQVDKGYELFQDM-IECSCFPDSITYTILVLGFSRRGHTSMAMELLQEM 353
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLG 435
V++G TP +++++ + +E A+ KE +A K + P S++ +
Sbjct: 354 VREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIA-----KGFNPDMQTYSALPNLST 408
Query: 436 DNRDV 440
N+ V
Sbjct: 409 PNKSV 413
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 101/222 (45%), Gaps = 11/222 (4%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
VI L S R++ A M + + V + L+ + K+R + A F+ +
Sbjct: 193 VIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANK 252
Query: 135 KVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+ L +G L++ + G ++++L ++ +MG ++ YN ++ + +GQ +K
Sbjct: 253 CMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGY 312
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
++ DM E PD+ +Y I + + R S +LQEM + H TY+ +
Sbjct: 313 ELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPA-LATYNVLIRS 371
Query: 253 YIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGN 294
+AG E A K ++++K G+N + Y++L N
Sbjct: 372 LSMAGQVEDAYTLFK---EMIAK-----GFNPDMQTYSALPN 405
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 154/352 (43%), Gaps = 50/352 (14%)
Query: 52 SLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQL 111
SL P VL+ QK L+ + +++ FKH+L + + Q L F H + V +
Sbjct: 4 SLLPKHVAAVLKQQK-DPLKALEMFNKVKREDGFKHSLLTYKCII-QKLGF--HGNFVAM 59
Query: 112 DLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGS 171
+ + AET + D ++ +Y + Y R+G V E++ + ++M S
Sbjct: 60 ENV-------LAETRMDI--DNSLLEGVYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPS 110
Query: 172 ALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQ 231
L+YN IM + +G ++ V L MK G+ PD +++ I I S+ S +L
Sbjct: 111 VLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLN 170
Query: 232 EMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYAS 291
M SQ ++ Y TV +AG E+ N+ + Y
Sbjct: 171 NMVSQG-CQLNAVAYCTV-----VAGFYEE---------------------NYRVEAYEL 203
Query: 292 LGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRV 351
++M++ + +L L +L K GE++E+E++L + C +
Sbjct: 204 F---NDMLRIGIFPDVSTFNKL-------LHTLCKKGEVQESERLLNKVLKKGMCSNLFT 253
Query: 352 PNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
NI + G +KGM+ A ++L ++++G TP +++ + G +N+ +A
Sbjct: 254 FNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEA 305
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/335 (19%), Positives = 125/335 (37%), Gaps = 62/335 (18%)
Query: 149 REGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNF 208
R+G++ ++S++ + G + YN ++C + L + G+ PD F
Sbjct: 263 RKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGF 322
Query: 209 SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKK 268
+Y I+ Y L + E +LQ + + D TY ++ N
Sbjct: 323 TYNTLIDGYCKMGMLQNAEKILQGAICKGFVP-DEFTYCSLIN----------------- 364
Query: 269 CEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI---TMLGSLV 325
L DE+ + L K L I ++ L
Sbjct: 365 ----------------------GLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLC 402
Query: 326 KIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPN 385
+ G + +A +M+ E + D N+++ G + G + A+ ++ + + KG P
Sbjct: 403 QEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVF 462
Query: 386 SWSIIAAGYADKNNMEKAFECMKEALAVHEENKFW----RPKPSLVSSILDWLG---DNR 438
+++ + GY + ME + + NK W P +S+L+ L N
Sbjct: 463 TFNTLIDGYCKQLKMETTIQIL---------NKMWSHGVTPDVITYNSVLNGLSKAVKNE 513
Query: 439 DV-EEVEAFVSSLKIKVQKRNMYHALTEAHIRSGQ 472
D+ E E V K V + Y+ LTE+ ++G+
Sbjct: 514 DLMETFETMVE--KGCVPNKITYNILTESLCKAGK 546
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/313 (20%), Positives = 131/313 (41%), Gaps = 24/313 (7%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
LY L+ +EGL+ ++L +M +M E G YN ++ G +++ D
Sbjct: 393 LYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDA 452
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
G PD F++ I+ Y + ++ + +L +M S ++ D TY++V N GL
Sbjct: 453 IAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHG-VTPDVITYNSVLN-----GL 506
Query: 259 KEKAII---YLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQL 313
KA+ ++ E +V K + + YN L G +E + K
Sbjct: 507 -SKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPD 565
Query: 314 NRDYITMLGSLVKIGELEEA----EKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKAD 369
+ T++ G+L+ A +M E++++S + NI++ +++K + +
Sbjct: 566 TVSFATIISGFANNGDLKGAYQLFRRMGEQYKVS---HTTATYNIMINAFAEKLDLHMGE 622
Query: 370 AVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSS 429
+ E+ G P ++ ++ G+ N + ++ + E + K + P +
Sbjct: 623 KLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMI-----EKGFIPSLTTFGR 677
Query: 430 ILDWLGDNRDVEE 442
+++ L V E
Sbjct: 678 VINCLCVQHRVHE 690
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 122/278 (43%), Gaps = 16/278 (5%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+Y +L++ R G + E+L ++M+ G YN ++ + G +++ L M
Sbjct: 1122 VYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLM 1181
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
+ G PD F++ I I+ ++ + +L+ M + D TY+T+ N + G
Sbjct: 1182 VDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGK-EPDILTYNTLMNGLCLVGQ 1240
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
E A + D K + YN LI+ Y DE +F+ + K K Y
Sbjct: 1241 LEDATKLFESLADRGIKL-NVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYN 1299
Query: 319 TMLGSLVKIGELEEAEKMLEEWE-------LSCYCYDFRVPNIILLGYSQKGMIEKADAV 371
T++G+L + G + A+K+ E + LS YC ++L G + G +E+A +
Sbjct: 1300 TLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYC-------VLLDGLCKNGHLEEAMDL 1352
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
+ I K P +SI+ G +E+A++ E
Sbjct: 1353 FQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDE 1390
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 160/359 (44%), Gaps = 27/359 (7%)
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDK----- 138
R K AL+ + M G+G++ V+ + + + + GL T+F +L VD+
Sbjct: 1135 RLKEALEFFKEMEGRGISADVYTYNSLIHGLSRA-GLWKEVTWFLNL----MVDRGFSPD 1189
Query: 139 --LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
+ L++ +EG V E+ +++ M+ G L YN +M GQ E +
Sbjct: 1190 AFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFE 1249
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
+ + G+ + FSY I IN Y ++ +EM + + TY+T+ +
Sbjct: 1250 SLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKG-LKPSTVTYNTLIGALCQS 1308
Query: 257 G---LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMK-FWGLQKIKCKKQ 312
G +K + ++ C + S Y L+ G+ +E M F ++K + K
Sbjct: 1309 GRVRTAQKLFVEMQTCGQFLKLST----YCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPN 1364
Query: 313 LNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
+ + +L + + G+LEEA K +E + D NI++ G KGM+ +A +L
Sbjct: 1365 IEV-FSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLL 1423
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSIL 431
++ +KG P ++++I +N + +A + ++E N+ + P ++ S +L
Sbjct: 1424 WQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEM-----RNRNFSPDEAVTSMLL 1477
>gi|356533316|ref|XP_003535211.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 918
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 149/326 (45%), Gaps = 16/326 (4%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL----YGAL 143
AL M +G+ ++ +++ + K+ ++A+ +F ++K+ L YG++
Sbjct: 328 ALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGKADAADHWFKEA--KEKLPSLNAVTYGSI 385
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
+ + + +D + +L+++M+ G Y+ +M YT G EK V +KE G
Sbjct: 386 IYAHCQTCNMDRAEALVREMEVQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGF 445
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQ--EMESQSHISMDWGTYSTVANYYIIAGLKEK 261
P SY IN Y +++ + LQ +M S I + TYS + N ++ LK+
Sbjct: 446 SPSVISYGCLINLY---TKIGKVSKALQISKMMKMSGIKHNMKTYSMLINGFL--KLKDW 500
Query: 262 AIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
A + ED D + YN++I+ + + N D + + + + R ++
Sbjct: 501 ANAF-SVFEDFTKDGLKPDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLP 559
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
++ + GE+ A ++ + S N ++LG +K + KA A+L ++ G
Sbjct: 560 IIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRKMAKAVAILDQMNVAG 619
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFE 405
P ++++ + GYA + EKAF+
Sbjct: 620 VGPNEHTYTTLMQGYASLGDTEKAFQ 645
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/303 (19%), Positives = 122/303 (40%), Gaps = 37/303 (12%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
K YG ++ Y R G + + + M+ G S+ Y+ ++ Y E+ +
Sbjct: 275 KEYGLMVKYYARRGDMHHARQTFESMQARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRK 334
Query: 198 MKENGVPPDNFSYRICINSYG--------------ARSELSSM----------------- 226
MKE G+ +Y I + + A+ +L S+
Sbjct: 335 MKEEGIEMTIVTYSIIVGGFAKMGKADAADHWFKEAKEKLPSLNAVTYGSIIYAHCQTCN 394
Query: 227 ----ENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGY 282
E +++EME Q I Y T+ + Y + G +EK +I + ++ S + Y
Sbjct: 395 MDRAEALVREMEVQG-IDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKE-CGFSPSVISY 452
Query: 283 NHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWEL 342
LI+ Y +G + ++ + K+ K + Y ++ +K+ + A + E++
Sbjct: 453 GCLINLYTKIGKVSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTK 512
Query: 343 SCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEK 402
D + N I+ + +++A ++K++ K+ PT ++ I G+A M +
Sbjct: 513 DGLKPDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGFARAGEMRR 572
Query: 403 AFE 405
A E
Sbjct: 573 ALE 575
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/304 (19%), Positives = 130/304 (42%), Gaps = 35/304 (11%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
YG L+N Y + G V ++L + + MK G + Y+ ++ + V D
Sbjct: 452 YGCLINLYTKIGKVSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFT 511
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSH--------------------- 238
++G+ PD Y I ++ S + ++++M+ + +
Sbjct: 512 KDGLKPDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGFARAGEMR 571
Query: 239 -------ISMDWGTYSTVANY-YIIAGLKEK-----AIIYLKKCEDIVSKSKDALGYNHL 285
+ G TV Y +I GL EK A+ L + ++ + Y L
Sbjct: 572 RALEIFDMMRRSGCIPTVHTYNALILGLVEKRKMAKAVAILDQM-NVAGVGPNEHTYTTL 630
Query: 286 ISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCY 345
+ YASLG+ ++ +++ + + + + Y +L S K G ++ A + +E
Sbjct: 631 MQGYASLGDTEKAFQYFSVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNI 690
Query: 346 CYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
+ V NI++ G++++G + +A +++++ K+G P ++++ +M+KA E
Sbjct: 691 PRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGVLPDIHTYTSFVNACCKAGDMQKATE 750
Query: 406 CMKE 409
++E
Sbjct: 751 IIQE 754
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/327 (18%), Positives = 138/327 (42%), Gaps = 10/327 (3%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLN-DEDKVDK-LYGALLN 145
ALQ+S+ M G+ ++ +++ ++ K++ +A + F D K D LY ++
Sbjct: 468 ALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIIT 527
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
+ +D ++ ++++M++ + + I+ + G+ + ++ M+ +G P
Sbjct: 528 AFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIP 587
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
+Y I + +++ +L +M + + + + TY+T+ Y G EKA Y
Sbjct: 588 TVHTYNALILGLVEKRKMAKAVAILDQM-NVAGVGPNEHTYTTLMQGYASLGDTEKAFQY 646
Query: 266 LKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD---YITMLG 322
+ D Y L+ G M + K K + R+ Y ++
Sbjct: 647 FSVLRN-EGLEIDVYTYEALLKSCCKSG---RMQSALAVTKEMSAKNIPRNTFVYNILID 702
Query: 323 SLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTP 382
+ G++ EA ++++ D + + G ++KA +++E+ G P
Sbjct: 703 GWARRGDVWEAADLMQQMRKEGVLPDIHTYTSFVNACCKAGDMQKATEIIQEMEAFGIKP 762
Query: 383 TPNSWSIIAAGYADKNNMEKAFECMKE 409
+++ + G+A + EKA C +E
Sbjct: 763 NLKTYTTLINGWARASMPEKALSCFEE 789
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 90/215 (41%), Gaps = 13/215 (6%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
+LDQ + G +E +++ S + A Q + +GL V+ + L
Sbjct: 611 ILDQMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFSVLRNEGLEIDVYTYEALLKSCC 670
Query: 116 KVRGLESAETYFNSLNDED--KVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
K ++SA ++ ++ + +Y L++ + R G V E+ LMQ+M++ G
Sbjct: 671 KSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGVLPDIH 730
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
Y + G +K +++ +M+ G+ P+ +Y IN + S + +EM
Sbjct: 731 TYTSFVNACCKAGDMQKATEIIQEMEAFGIKPNLKTYTTLINGWARASMPEKALSCFEEM 790
Query: 234 ESQSHISMDWGTY----------STVANYYIIAGL 258
+ + + D Y +T A Y+ +GL
Sbjct: 791 K-LAELKPDKAAYHCLMTSLLSRATFAQSYVYSGL 824
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 153/347 (44%), Gaps = 60/347 (17%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEK--------- 190
YG+L++ + G ++E+ +++KMKE+G +A+ YN ++ Y N G K
Sbjct: 309 YGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMV 368
Query: 191 ----IPDV----------------------LLDMKENGVPPDNFSYRICINSYGARSELS 224
+P V + DM ++G+ PD+ +Y I IN Y
Sbjct: 369 RRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAK 428
Query: 225 SMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK------SKD 278
N+ EM S+ I TY+++ Y+++ +K +D+ K S D
Sbjct: 429 KAFNLHDEMISKG-IQPTLVTYTSL--IYVLSKRNR-----MKAADDLFEKIIREGASPD 480
Query: 279 ALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD---YITMLGSLVKIGELEEAEK 335
+ +N LI + + GN D + + L K K+ + D Y T++ + G++EEA +
Sbjct: 481 LIMFNALIDGHCANGNLD---RAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARE 537
Query: 336 MLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYA 395
+L+E + D N ++ GYS++G I A + E++ G PT +++ + G
Sbjct: 538 LLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLC 597
Query: 396 DKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEE 442
+ A E +KE ++ K P S S+++ +G D E
Sbjct: 598 KNQQGDLAEELLKEMVS-----KGITPDDSTYFSLIEGIGKVDDSSE 639
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 91/432 (21%), Positives = 180/432 (41%), Gaps = 56/432 (12%)
Query: 68 SELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYF 127
S + +IR KR A + + M +G+ + L L K+ E+ +
Sbjct: 165 SSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLY 224
Query: 128 NSLNDEDKVDKLY--GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNT 185
+ +Y ++N +EG + ++ + M+ +G + + YN ++ Y +
Sbjct: 225 AEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSR 284
Query: 186 GQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGT 245
G+ E VL MK GV PD+++Y I+ +L +L++M+ + T
Sbjct: 285 GRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAV-T 343
Query: 246 YSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQ 305
Y+T+ + Y G D+V A GY +DEM++ L
Sbjct: 344 YNTLIDGYCNKG-------------DLVK----AFGY------------RDEMVRRAILP 374
Query: 306 KIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMI 365
+ Y ++ +L G+++EA+ M+++ S D NI++ GY + G
Sbjct: 375 TVST-------YNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNA 427
Query: 366 EKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPS 425
+KA + E++ KG PT +++ + + +N M+ A + ++ + + P
Sbjct: 428 KKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKII-----REGASPDLI 482
Query: 426 LVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNM------YHALTEAHIRSG--QEVDGL 477
+ ++++D N +++ A + + KRN+ Y+ L + R G +E L
Sbjct: 483 MFNALIDGHCANGNLDRAFALLKEM----DKRNIVPDEVTYNTLMQGRCREGKVEEAREL 538
Query: 478 LESMKADDIDED 489
L+ MK I D
Sbjct: 539 LKEMKRRGIRPD 550
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 74/152 (48%), Gaps = 2/152 (1%)
Query: 86 KHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGAL 143
K A + + M +G+ ++ + + ++ K +++A+ F + E L + AL
Sbjct: 428 KKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNAL 487
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
++ + G +D + +L+++M + + YN +M G+ E+ ++L +MK G+
Sbjct: 488 IDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGI 547
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMES 235
PD+ SY I+ Y R +++ + EM S
Sbjct: 548 RPDHISYNTLISGYSKRGDINDAFTIRDEMLS 579
>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Cucumis sativus]
Length = 637
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 151/326 (46%), Gaps = 7/326 (2%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAET-YFNSLNDEDKVDK-LYGALLN 145
AL++ E M G+G A +V + + +GKV ++ A + +FN L D K D L L+N
Sbjct: 284 ALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLIN 343
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM-CLYTNTGQHEKIPDVLLDMKENGVP 204
R G ++++L L KM + + + YN ++ ++ + + MK NG+
Sbjct: 344 ILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIA 403
Query: 205 PDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAII 264
P +F+Y I I+ + + + +L+EM+ + Y ++ + A E A
Sbjct: 404 PSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCP-AAYCSLIDSLGRAKRYEAANE 462
Query: 265 YLKKCEDIVSKSKDALGYNHLISHYASLGN-KDEMMKFWGLQKIKCKKQLNRDYITMLGS 323
++ ++ +S A Y +I H+ + G D + F ++K+ C + Y ++
Sbjct: 463 LFQELKENCGRS-SARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDV-YTYNALMSG 520
Query: 324 LVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPT 383
+++ G ++EA ++ + D + NIIL G ++ G ++A + ++ + P
Sbjct: 521 MIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPD 580
Query: 384 PNSWSIIAAGYADKNNMEKAFECMKE 409
S++ I + + E A + M+E
Sbjct: 581 AVSYNTILSCLSRAGMFEMAAKLMRE 606
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 137/313 (43%), Gaps = 31/313 (9%)
Query: 152 LVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM-KENGVPPDNFSY 210
+V+++LS+ ++K +A YN ++ + + G HEKI ++ ++ E PD +Y
Sbjct: 174 MVNKALSVFYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITY 233
Query: 211 RICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCE 270
I+++G + EM+ ++ + Y+T+ Y E A L+ E
Sbjct: 234 SALISAFGKLERYDFAFRLFDEMK-ENGLHPTEKIYTTILAMYFKLNKVEAA---LRLVE 289
Query: 271 DIVSK--SKDALGYNHLISHYASLGNKDEMMK-FWGLQKIKCKKQ--LNRDYITMLGSLV 325
++ K + Y LI +G D+ F+ + K CK L + I +LG
Sbjct: 290 EMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILG--- 346
Query: 326 KIGELEEAEKMLEEWE-LSCYCYDFRVPNIILLGYSQKGMIE-KADAV-----LKEIVKK 378
+ G LE+A K+ + + L C PN++ K + E KA A +++
Sbjct: 347 RAGRLEDALKLFGKMDSLQC------APNVVTYNTVIKAIFESKAPASEAALWFEKMKAN 400
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNR 438
G P+ +++I+ G+ N +EKA ++E + K + P P+ S++D LG +
Sbjct: 401 GIAPSSFTYAILIDGFCKTNRVEKALLLLEEM-----DEKGFPPCPAAYCSLIDSLGRAK 455
Query: 439 DVEEVEAFVSSLK 451
E LK
Sbjct: 456 RYEAANELFQELK 468
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 134/337 (39%), Gaps = 40/337 (11%)
Query: 107 HAVQLDLIGKVRGLESAETYFNSL--NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMK 164
++ + GK+ + A F+ + N +K+Y +L Y + V+ +L L+++MK
Sbjct: 233 YSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMK 292
Query: 165 EMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELS 224
G + Y ++ G+ + + +M ++G PD IN G L
Sbjct: 293 GKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLE 352
Query: 225 SMENVLQEMESQSHISMDWGTYSTV--ANYYIIAGLKEKAIIYLKKCEDIVSKSK----- 277
+ +M+S + + TY+TV A + A E A+ + K + ++ S
Sbjct: 353 DALKLFGKMDSL-QCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAI 411
Query: 278 ---------------------DALGYNHLISHYASLGNKDEMMKFWG-----LQKIK--C 309
D G+ + Y SL + K + Q++K C
Sbjct: 412 LIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENC 471
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEW-ELSCYCYDFRVPNIILLGYSQKGMIEKA 368
+ R Y M+ G L +A + E +L C D N ++ G + GMI++A
Sbjct: 472 GRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGC-SPDVYTYNALMSGMIRAGMIDEA 530
Query: 369 DAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
++++ + + G TP S +II G A ++A E
Sbjct: 531 HSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIE 567
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y AL++ +R G++DE+ SLM+ M+E G ++N I+ TG ++ ++ MK
Sbjct: 514 YNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMK 573
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTV 249
E+ + PD SY ++ +++EM+ + D TYS++
Sbjct: 574 ESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKG-FEYDSITYSSI 622
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 104/242 (42%), Gaps = 7/242 (2%)
Query: 93 EWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE--DKVDKLYGALLNCYVRE 150
E M G+A S +A+ +D K +E A ++++ Y +L++ R
Sbjct: 395 EKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRA 454
Query: 151 GLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSY 210
+ + L Q++KE SA Y ++ + N G+ D+ +MK+ G PD ++Y
Sbjct: 455 KRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTY 514
Query: 211 RICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCE 270
++ + ++++ M ++ + D +++ + N G ++AI K +
Sbjct: 515 NALMSGMIRAGMIDEAHSLMRNMR-ENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMK 573
Query: 271 DIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGEL 330
+ DA+ YN ++S + G + K K+ K D IT L +G++
Sbjct: 574 E-SEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKL---KGFEYDSITYSSILEAVGKV 629
Query: 331 EE 332
+E
Sbjct: 630 DE 631
>gi|302801570|ref|XP_002982541.1| hypothetical protein SELMODRAFT_421992 [Selaginella moellendorffii]
gi|300149640|gb|EFJ16294.1| hypothetical protein SELMODRAFT_421992 [Selaginella moellendorffii]
Length = 487
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 86/413 (20%), Positives = 165/413 (39%), Gaps = 61/413 (14%)
Query: 72 LQRVIRQLRSRKRFKHALQVSEWM-SGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSL 130
L+ +I +LR R RF ALQ+S WM + + D ++L L + E AE +
Sbjct: 106 LRVIIARLRRRSRFLQALQISNWMFHDRRFTVATQDLVMRLYLTSRSGLFEEAEKILAEV 165
Query: 131 NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEK 190
+ + + Y ALL+ Y V + L ++MKE G S YN ++ +Y H +
Sbjct: 166 HFTQRNEWAYLALLSGYASRRHVTRAEKLWRRMKERGLTKSPHGYNNMLIMYKRKKLHSR 225
Query: 191 IPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENV----LQEMESQSHISMDWGTY 246
+ + ++M +GV PD ++ + ++ AR ++ + + M + +++ W T
Sbjct: 226 LRQLFVEMVLSGVVPDATTFLVILS---AREQIGGFQGIEKRARHAMANLEILNLPWFTM 282
Query: 247 STVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQK 306
V Y G E +D+ +A S ++G + + QK
Sbjct: 283 EVVMRVYGFLGDLEGG------GKDVEESPAEAF------SMAGAMGTSEAI-----FQK 325
Query: 307 IKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIE 366
G+ K +L+ M+E Y ++GM
Sbjct: 326 T--------------GNETKDSDLQRHYVMIE-------------------AYCREGMTG 352
Query: 367 KADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSL 426
KA +L++++ KG++P P +++ I + +++A E +L + PS+
Sbjct: 353 KAQGLLRKLIAKGRSPAPFAFNSIIQCFLKDKQLDRALELFYVSLNRFGTRQTLALGPSI 412
Query: 427 VSSILDWLGDNRDVEEVEAFVSSLK--IKVQKRNMYHALTEAHIRSGQEVDGL 477
+ I++ DV E V + +Y+AL + ++ S G+
Sbjct: 413 L-GIMEVYAKAGDVNAAEQIVHKCQECHYFSDVRLYNALLKVYLNSQVPATGI 464
>gi|255660942|gb|ACU25640.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 484
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 93/433 (21%), Positives = 182/433 (42%), Gaps = 29/433 (6%)
Query: 67 ISELELQRVIRQLRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAET 125
+ ++ + V L S K +HALQ W+ L + H ++++G+ L A
Sbjct: 7 VPSIDHELVYNVLHSAKNSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARC 66
Query: 126 YFNSLN------DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM 179
+ DED L+ +++ Y + G+V ES+ + QKM+E+G + +Y+ +
Sbjct: 67 ILLDMPKKGLEWDED----LWVLMIDSYGKAGIVQESVKMFQKMEELGVERTIKSYDALF 122
Query: 180 CLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHI 239
+ G++ M G+ P ++ + + + ++ + ++M+S+ I
Sbjct: 123 KVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMMWGFFLSGKVETANRFFEDMKSR-EI 181
Query: 240 SMDWGTYSTVANYYIIAGLKEKAIIYL--KKCEDIVSKSKDALGYNHLISHYASLGNKDE 297
D TY+T+ N Y E+A Y K +I + Y LI Y S+ D+
Sbjct: 182 MPDVVTYNTMVNGYCRVKKMEEAEKYFVEMKGRNI---EPTVVTYTTLIKGYVSVDRVDD 238
Query: 298 MMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEW-ELSCYCYDFRVPNIIL 356
++ K K Y T+L L ++ EA +L+E E D + ++
Sbjct: 239 ALRLVEEMKGFGMKPNAITYSTLLPGLCNAEKMSEARSILKEMVEKYIAPTDNSIFMRLI 298
Query: 357 LGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEE 416
G + G ++ A VLK +++ + ++ Y +KA + + + + E+
Sbjct: 299 SGQCKAGDLDAAANVLKAMIRLSVPTEAGHYGVLIENYCKAGEYDKAIKLLDKVI---EK 355
Query: 417 NKFWRPKPSL------VSSILDWLGDNRDVEEVEAFVSSL-KIKVQKRNMYHALTEAHIR 469
+ RP+ +L + ++++L +N + EA V L K+ VQ + L H +
Sbjct: 356 DIILRPQSTLHMESSAYNPLIEYLCNNGQTAKAEALVRQLMKLGVQDPTALNTLIRGHSQ 415
Query: 470 SGQEVDGLLESMK 482
G D E +K
Sbjct: 416 EGSP-DSAFELLK 427
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 139/330 (42%), Gaps = 54/330 (16%)
Query: 116 KVRGLESAETYFNSL---NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
+V+ +E AE YF + N E V Y L+ YV VD++L L+++MK G +A
Sbjct: 197 RVKKMEEAEKYFVEMKGRNIEPTV-VTYTTLIKGYVSVDRVDDALRLVEEMKGFGMKPNA 255
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP-DNFSYRICINSYGARSELSSMENVLQ 231
+ Y+ ++ N + + +L +M E + P DN + I+ +L + NVL+
Sbjct: 256 ITYSTLLPGLCNAEKMSEARSILKEMVEKYIAPTDNSIFMRLISGQCKAGDLDAAANVLK 315
Query: 232 EMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC--EDIVSKSKDAL-----GYNH 284
M S + + G Y + Y AG +KAI L K +DI+ + + L YN
Sbjct: 316 AMIRLS-VPTEAGHYGVLIENYCKAGEYDKAIKLLDKVIEKDIILRPQSTLHMESSAYNP 374
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSC 344
LI + + G Q K + ++ L+K+G
Sbjct: 375 LIEYLCNNG-----------QTAKAE--------ALVRQLMKLG---------------- 399
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
D N ++ G+SQ+G + A +LK ++++ +S+ + Y KN A
Sbjct: 400 -VQDPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEQSSYDSLVQSYLKKNEPADA- 457
Query: 405 ECMKEALAVHEENKFWRPKPSLVSSILDWL 434
K AL EN P SL S+++ L
Sbjct: 458 ---KAALDSMIENGHL-PDSSLFRSVMESL 483
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/429 (19%), Positives = 173/429 (40%), Gaps = 12/429 (2%)
Query: 47 GDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHD 106
GD + ++ ++D V +G K + V++ L R+ A +V M G+A V
Sbjct: 208 GDVEAAMA-LIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRS 266
Query: 107 HAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMK 164
+ + + LE A ++ + + + L+ + R G +D + +++M+
Sbjct: 267 FNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMR 326
Query: 165 EMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELS 224
E G + Y ++ + G + V +M G PD +Y +N LS
Sbjct: 327 EFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLS 386
Query: 225 SMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNH 284
E +L EM+ + + D T++T+ + Y G EKA+ + D + D + YN
Sbjct: 387 DAEELLNEMKERG-VPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRP-DIVTYNT 444
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSC 344
LI G+ + + W + + Y ++ S + G+++ A L+E
Sbjct: 445 LIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKG 504
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
+ N I+ GY + G + K L ++ P +++ + GY + M +AF
Sbjct: 505 IVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAF 564
Query: 405 ECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKV--QKRNMYHA 462
+K EN+ +P + I+ + +++E + + + R Y +
Sbjct: 565 NLLKIM-----ENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMS 619
Query: 463 LTEAHIRSG 471
+ H+ +G
Sbjct: 620 MINGHVVAG 628
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 148/361 (40%), Gaps = 25/361 (6%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ +++ R G V+ +++L+ M G + YN ++ G+ +K +V M
Sbjct: 197 HNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMD 256
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
GV PD S+ + I + EL +EM + ++ D ++S + + G
Sbjct: 257 ACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGR-RVTPDVVSFSCLIGLFTRRGEM 315
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLG-------NKDEMMKFWGLQKIKCKKQ 312
+ A YL++ + D + Y +I + G +DEM+ F L +
Sbjct: 316 DHAAEYLREMREF-GLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVV---- 370
Query: 313 LNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
Y T+L L K L +AE++L E + D ++ GY + G IEKA
Sbjct: 371 ---TYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFF 427
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILD 432
I + P +++ + G + ++ KA E + +H F P S ++D
Sbjct: 428 DTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDD---MHSREIF--PNHVTYSILID 482
Query: 433 WLGDNRDVEEVEAFVSSLKIKVQKRNM--YHALTEAHIRSGQEVDG--LLESMKADDIDE 488
+ V+ AF+ + K N+ Y+++ + + RSG G L M+ D +
Sbjct: 483 SHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMP 542
Query: 489 D 489
D
Sbjct: 543 D 543
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 131/286 (45%), Gaps = 12/286 (4%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y LLN +E + ++ L+ +MKE G + ++ Y G EK +
Sbjct: 372 YNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTIS 431
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ + PD +Y I+ + +L + +M S+ I + TYS + + + G
Sbjct: 432 DQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSR-EIFPNHVTYSILIDSHCEKGQV 490
Query: 260 EKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR-- 315
+ A +L +++V+K + + YN +I Y GN + +F L K++ K +
Sbjct: 491 DNAFAFL---DEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQF--LPKMRHDKVMPDLI 545
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
Y T++ VK G++ EA +L+ E D N+I+ G+S G +++AD V K++
Sbjct: 546 TYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKM 605
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL--AVHEENKF 419
+G P ++ + G+ N +K+F+ E L + ++KF
Sbjct: 606 GARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPDDKF 651
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 99/223 (44%), Gaps = 13/223 (5%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDK--LYGALLN 145
ALQ + +S Q L + + +D + + L A ++ ++ + Y L++
Sbjct: 423 ALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILID 482
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
+ +G VD + + + +M G + + YN I+ Y +G K L M+ + V P
Sbjct: 483 SHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMP 542
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG-LKEKAII 264
D +Y I+ Y ++ N+L+ ME++ ++ D TY+ + + + + G ++E +
Sbjct: 543 DLITYNTLIHGYVKEGKMHEAFNLLKIMENE-NVQPDAVTYNMIISGFSVHGNMQEADWV 601
Query: 265 YLKKCEDIVSKSKDALGYNHLISHYASLGNK-------DEMMK 300
Y K + D Y +I+ + GN DEM++
Sbjct: 602 YKKMGARGI--EPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQ 642
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 53/272 (19%), Positives = 118/272 (43%), Gaps = 17/272 (6%)
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
+ ++ I ++SY + ++ V+ EME + + D T++ + + AG E A+
Sbjct: 158 NTYTLNIMVHSYCKTLQFGEVDTVISEMEKRC-VFPDVVTHNVMVDARFRAGDVEAAMAL 216
Query: 266 LKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGS 323
+ + +VSK + YN ++ G D+ + + R + ++G
Sbjct: 217 I---DSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGG 273
Query: 324 LVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPT 383
+ GELEEA + +E D + ++ ++++G ++ A L+E+ + G P
Sbjct: 274 FCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPD 333
Query: 384 PNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVS--SILDWLGDNRDVE 441
++++ G+ M EAL V +E + P +V+ ++L+ L R +
Sbjct: 334 GVIYTMVIGGFCRAG-------LMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLS 386
Query: 442 EVEAFVSSLKIKVQKRNM--YHALTEAHIRSG 471
+ E ++ +K + ++ + L + R G
Sbjct: 387 DAEELLNEMKERGVPPDLCTFTTLIHGYCRDG 418
>gi|255660918|gb|ACU25628.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 484
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 93/431 (21%), Positives = 183/431 (42%), Gaps = 30/431 (6%)
Query: 79 LRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAETYFNSLN------ 131
L K +HALQ W+ L + H ++++G+ L A +
Sbjct: 19 LHGSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEW 78
Query: 132 DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
DED ++ +++ Y + G+V ES+ L QKM+E+G + +Y+ + + G+
Sbjct: 79 DED----MWVLMIDSYGKAGIVQESVKLFQKMEELGVERTTKSYDTLFKVILRRGRFMMA 134
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
M G+ P ++ + I + ++ + +M+S+ IS D TY+T+ N
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFDDMKSR-EISPDVITYNTMIN 193
Query: 252 -YYIIAGLKEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
YY + + E +++ K +I + Y LI Y S+ D+ ++ K
Sbjct: 194 GYYRVKKMDEAEKYFVEMKGRNI---EPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGYG 250
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEW-ELSCYCYDFRVPNIILLGYSQKGMIEKA 368
K Y T+L L ++ EA +L+E + D + ++ G + G ++ A
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARSVLKEMVDKYIAPTDNSIFMRLISGQCKTGNLDAA 310
Query: 369 DAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPK----- 423
VLK +++ + ++ + + +KA + + + + E++ RP+
Sbjct: 311 ADVLKAMIRLSVPTEAGHYGVLIENFCKADQHDKAVKLLDKLI---EKDIILRPQSTLHM 367
Query: 424 -PSLVSSILDWLGDNRDVEEVEAFVSS-LKIKVQKRNMYHALTEAHIRSGQEVDG--LLE 479
PS + ++++L +N + EA V LK+ VQ + L H + G LL+
Sbjct: 368 EPSAYNPMIEYLCNNGQTAKAEALVRQLLKLGVQDPTALNTLVRGHSQEGSPDSAFELLK 427
Query: 480 SMKADDIDEDK 490
M +D +K
Sbjct: 428 IMLRRKVDSEK 438
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 87/392 (22%), Positives = 161/392 (41%), Gaps = 34/392 (8%)
Query: 65 QKISELELQRVIRQ-------LRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQL---DLI 114
QK+ EL ++R + + R RF A + M +G+ + H V + L
Sbjct: 104 QKMEELGVERTTKSYDTLFKVILRRGRFMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLS 163
Query: 115 GKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
GKV E+A +F+ + + + Y ++N Y R +DE+ +MK +
Sbjct: 164 GKV---ETANRFFDDMKSREISPDVITYNTMINGYYRVKKMDEAEKYFVEMKGRNIEPTV 220
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQE 232
+ Y ++ Y + Q + ++ +MK G+ P+ +Y + ++S +VL+E
Sbjct: 221 VTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSVLKE 280
Query: 233 MESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASL 292
M + D + + + G + A LK + S +A Y LI ++
Sbjct: 281 MVDKYIAPTDNSIFMRLISGQCKTGNLDAAADVLKAMIRL-SVPTEAGHYGVLIENFCKA 339
Query: 293 GNKDEMMKFWGLQKIKCKKQLNRD----------YITMLGSLVKIGELEEAEKMLEEWEL 342
D+ +K L K+ K + R Y M+ L G+ +AE ++ + L
Sbjct: 340 DQHDKAVKL--LDKLIEKDIILRPQSTLHMEPSAYNPMIEYLCNNGQTAKAEALVRQL-L 396
Query: 343 SCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEK 402
D N ++ G+SQ+G + A +LK ++++ +++ + Y KN
Sbjct: 397 KLGVQDPTALNTLVRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKKNEPAD 456
Query: 403 AFECMKEALAVHEENKFWRPKPSLVSSILDWL 434
A K AL EN P SL S+++ L
Sbjct: 457 A----KXALDSMIENDHL-PDSSLFRSVMESL 483
>gi|255660876|gb|ACU25607.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 484
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/432 (21%), Positives = 186/432 (43%), Gaps = 32/432 (7%)
Query: 79 LRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAETYFNSLN------ 131
L S +HALQ W+ L + H ++++G+ L A +
Sbjct: 19 LHSSNTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEW 78
Query: 132 DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
DED ++ +++ Y +EG+V ES+ + QKM+E+G + +YN + + G++
Sbjct: 79 DED----MWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMA 134
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
M G+ P ++ + I + ++ + ++M+S+ IS D TY+T+ N
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR-EISPDVVTYNTMIN 193
Query: 252 -YYIIAGLKEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
YY + ++E +++ K +I + Y LI Y S+ D+ ++ K
Sbjct: 194 GYYRVKKMEEAEKYFVEMKGRNI---EPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGSG 250
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYC--YDFRVPNIILLGYSQKGMIEK 367
K Y T+L L ++ EA +L+E + Y D + ++ + + G ++
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARVILKEM-MDKYLAPTDNSIFMRLISSHCKSGNLDA 309
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPK---- 423
A VLK +++ + ++ + +KA + + + + E++ RP+
Sbjct: 310 AADVLKAMIRLSVPTEAGHYGLLIEKFCKAGQYDKAVKLLDKLI---EKDIILRPQSTLH 366
Query: 424 --PSLVSSILDWLGDNRDVEEVEAFVSSL-KIKVQKRNMYHALTEAHIRSGQEVDG--LL 478
P+ + ++++L +N + E V L K+ VQ + L H + G LL
Sbjct: 367 LEPNAYNPMIEYLCNNGQASKAETLVRQLMKLGVQDPTALNTLIRGHSQEGSPDSAFELL 426
Query: 479 ESMKADDIDEDK 490
+ M +D +K
Sbjct: 427 KIMLRRKVDSEK 438
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 142/330 (43%), Gaps = 54/330 (16%)
Query: 116 KVRGLESAETYFNSL---NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
+V+ +E AE YF + N E V Y L+ YV VD++L L+++MK G +A
Sbjct: 197 RVKKMEEAEKYFVEMKGRNIEPTV-VTYTTLIKGYVSVDQVDDALRLVEEMKGSGIKPNA 255
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP-DNFSYRICINSYGARSELSSMENVLQ 231
+ Y+ ++ N + + +L +M + + P DN + I+S+ L + +VL+
Sbjct: 256 ITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLK 315
Query: 232 EMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC--EDIVSKSKDAL-----GYNH 284
M S + + G Y + + AG +KA+ L K +DI+ + + L YN
Sbjct: 316 AMIRLS-VPTEAGHYGLLIEKFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLEPNAYNP 374
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSC 344
+I + + G Q K + T++ L+K+G
Sbjct: 375 MIEYLCNNG-----------QASKAE--------TLVRQLMKLG---------------- 399
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
D N ++ G+SQ+G + A +LK ++++ ++++ + Y KN A
Sbjct: 400 -VQDPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDA- 457
Query: 405 ECMKEALAVHEENKFWRPKPSLVSSILDWL 434
K AL EN P +L S+++ L
Sbjct: 458 ---KAALDSMIENDHL-PDSALFRSVMESL 483
>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
Length = 834
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/412 (22%), Positives = 175/412 (42%), Gaps = 31/412 (7%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+++ L + R + +++ E G+G ++ + +D K +ESA F L +
Sbjct: 214 MVKGLCLKGRIEDGIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKG 273
Query: 135 KVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+ L +G+L+N + + G+ + L+ +MK+ G + YN I+ G K
Sbjct: 274 FIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAK 333
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
D L +M EN PD +Y IN + +R E+ E +L++ + ++ + TY+ + +
Sbjct: 334 DTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRG-LAPNKLTYTPLVHG 392
Query: 253 YIIAGLKEKAIIYLKKCEDIVSKSK---DALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
Y G KA YL + +S S D + Y LI G D +
Sbjct: 393 YCKQGEYTKATDYLIE----MSTSGLEVDMISYGALIHGLVVAGEVDTALTIR------- 441
Query: 310 KKQLNRD-------YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQK 362
+ +NR Y ++ L K G+L A+ ML E D V ++ G+ +
Sbjct: 442 DRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRH 501
Query: 363 GMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRP 422
G +++A + + I++KG P ++++ G++ M+ A C+ + H P
Sbjct: 502 GNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHH-----VP 556
Query: 423 KPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNM--YHALTEAHIRSGQ 472
S+I+D ++ V + + K N+ Y +L + R G+
Sbjct: 557 DIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGE 608
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 118/306 (38%), Gaps = 40/306 (13%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+N + G V+E+ L+++ G + L Y ++ Y G++ K D L++M
Sbjct: 351 YNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMS 410
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+G+ D SY I+ E+ + + M ++ I D Y+ + N G
Sbjct: 411 TSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRG-ILPDANIYNVLMNGLFKKGKL 469
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
A + L + D + + DA Y L+ + GN DE K + L K Y
Sbjct: 470 SMAKVMLTEMLD-QNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNV 528
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRV---------------------------- 351
M+ K G ++ A +++ + + D
Sbjct: 529 MIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQN 588
Query: 352 --PNII-----LLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA- 403
PN++ + GY +KG + A+ + + G P+ ++SI+ + + + KA
Sbjct: 589 CKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAV 648
Query: 404 --FECM 407
FE M
Sbjct: 649 SYFELM 654
>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 152/341 (44%), Gaps = 14/341 (4%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I L + AL++ + M GL +V + +D + K + LE A + F ++D+
Sbjct: 165 LIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKV 224
Query: 135 KVDK--LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+ +L++ + G VD++ SL +KM + G A+ Y ++ + G+ E
Sbjct: 225 CTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGH 284
Query: 193 DVLLDMKENGVPPDNF---SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTV 249
+ +M G PD +Y C+ G E + +E+ + I D +YS +
Sbjct: 285 KIYKEMVHTGCSPDLTLINTYMDCVFKAG---ETEKGRALFREINAHGFIP-DARSYSIL 340
Query: 250 ANYYIIAGLKEKA--IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKI 307
+ + AGL + + Y K + V D YN +I + G ++ + K+
Sbjct: 341 IHGLVKAGLANETYELFYAMKEQGCVL---DTHAYNAVIDGFCKSGKVNKAYQLLEEMKV 397
Query: 308 KCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEK 367
K Y +++ L KI L+EA + EE + + + V + ++ G+ + G I++
Sbjct: 398 KGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDE 457
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMK 408
A +++E+++KG TP +W+ + + +A C +
Sbjct: 458 AYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQ 498
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 92/440 (20%), Positives = 178/440 (40%), Gaps = 46/440 (10%)
Query: 68 SELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG----------KV 117
S + ++ V ++SRK + A + + M + + + + +G K
Sbjct: 10 SNISIELVANCVKSRK-LREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWVLCKA 68
Query: 118 RGLESAETYFNSLNDEDKVDKLYG--ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNY 175
L+ A F L KV Y ++ Y G DE+ L+++ K GS S + Y
Sbjct: 69 NRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAY 128
Query: 176 NGIMCLYTNTGQHEKIPDVLL---DMKENGVPPDNFSYRICINSYGARSELSSMENVLQE 232
N C+ T G+ ++ + L +MK + V P+ +Y I I+ +L++ + +
Sbjct: 129 N---CILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRDD 184
Query: 233 MESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASL 292
ME ++ + + T + + + A E+A + +D V + +A+ ++ LI
Sbjct: 185 ME-RAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVC-TPNAVTFSSLIDGLGKC 242
Query: 293 GNKDEMMKFWGLQKIKCKKQLNR-DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRV 351
G D+ + + + C Y +++ S K G E+ K+ +E + D +
Sbjct: 243 GRVDDAYSLYE-KMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTL 301
Query: 352 PNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYAD---KNNMEKAFECMK 408
N + + G EK A+ +EI G P S+SI+ G N + F MK
Sbjct: 302 INTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMK 361
Query: 409 EALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNMYHALTEAHI 468
E V + + + ++++D + V + + +K+K + +
Sbjct: 362 EQGCVLDTHAY--------NAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTV--------V 405
Query: 469 RSGQEVDGLLESMKADDIDE 488
G +DGL K D +DE
Sbjct: 406 TYGSVIDGL---AKIDRLDE 422
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 83/416 (19%), Positives = 168/416 (40%), Gaps = 30/416 (7%)
Query: 81 SRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL- 139
S +F A + E +G SV + L +GK R +E A F + D V +
Sbjct: 102 SAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMK-RDAVPNVP 160
Query: 140 -YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
Y L++ REG ++ +L + M+ G F + L N ++ + E+ + M
Sbjct: 161 TYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGM 220
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
+ P+ ++ I+ G + ++ ++M H+ Y+++ + G
Sbjct: 221 DDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAI-VYTSLIRSFFKCGR 279
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN---- 314
KE K+ S D N + G ++ + +++N
Sbjct: 280 KEDGHKIYKEMVH-TGCSPDLTLINTYMDCVFKAGETEKGRALF--------REINAHGF 330
Query: 315 ----RDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADA 370
R Y ++ LVK G E ++ + D N ++ G+ + G + KA
Sbjct: 331 IPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQ 390
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSI 430
+L+E+ KG PT ++ + G A + +++A+ +EA ++ + + SS+
Sbjct: 391 LLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEA-----KSNGIKLNVVVYSSL 445
Query: 431 LDWLGDNRDVEEVEAFVSSLKIKVQKRNMY--HALTEAHIRSGQEVDGLL--ESMK 482
+D G ++E + L K N+Y + L +A +++ + + L+ +SMK
Sbjct: 446 IDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMK 501
>gi|242095042|ref|XP_002438011.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
gi|241916234|gb|EER89378.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
Length = 1443
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/458 (20%), Positives = 185/458 (40%), Gaps = 57/458 (12%)
Query: 41 SRISPLGDPDVSL---TPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSG 97
+R++ L D ++L PV D VL+G + + E+ V+R + ++ AL EW++
Sbjct: 126 ARVAGLADAVLALPPGAPVDD--VLDGARATPDEVAFVVRAV-GESSWRRALDAFEWLA- 181
Query: 98 QGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESL 157
+ A + AV L ++G+ R AE F E +++ A++ Y R G D++
Sbjct: 182 RSTAPASRAVAVVLGVLGRARQDSIAEEVFLRFAGEGATVQVFNAMMGVYARSGRFDDAR 241
Query: 158 SLMQKMKEMG------SFGSALN-------------------------------YNGIMC 180
L+ M + G SF + +N YN ++
Sbjct: 242 QLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLIS 301
Query: 181 LYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHIS 240
+ + E V +M + PD ++Y ++ +G + E + E+ + +
Sbjct: 302 ACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFGELVEKGFMP 361
Query: 241 MDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEM 298
D TY+++ + G +K CE++V K+ + YN +I Y +G D
Sbjct: 362 -DAVTYNSLLYAFAKEGNVDKV---EHTCEELVKAGFKKNEITYNTMIHMYGKMGRLDLA 417
Query: 299 MKFWG-LQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL 357
+ + ++ + C Y M+ SL K+ ++ EA K+LE+ + + ++
Sbjct: 418 VGLYDEMRAVGCTPD-AVTYTVMIDSLGKMDKIAEAGKVLEDMADAGLKPTLVAFSALIC 476
Query: 358 GYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEEN 417
Y++ G A+ ++ G P ++ ++ +A EK + + N
Sbjct: 477 AYAKGGRRADAEKTFDCMIASGVKPDRLAYLVMLDVFARSGETEKMLRLYRTMM-----N 531
Query: 418 KFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQ 455
+RP + +L L EE+E + +++ Q
Sbjct: 532 DNYRPDDDMYQVLLVALAKEDKCEEIEEIIQDMELLCQ 569
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 138/305 (45%), Gaps = 21/305 (6%)
Query: 115 GKVRGLESAETYFNSLNDE----DKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFG 170
G+ E AE F L ++ D V Y +LL + +EG VD+ +++ + G
Sbjct: 339 GRCGKAEEAERLFGELVEKGFMPDAVT--YNSLLYAFAKEGNVDKVEHTCEELVKAGFKK 396
Query: 171 SALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVL 230
+ + YN ++ +Y G+ + + +M+ G PD +Y + I+S G +++ VL
Sbjct: 397 NEITYNTMIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEAGKVL 456
Query: 231 QEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS---KDALGYNHLIS 287
++M + + + +S + Y G + A +K D + S D L Y ++
Sbjct: 457 EDM-ADAGLKPTLVAFSALICAYAKGGRRADA----EKTFDCMIASGVKPDRLAYLVMLD 511
Query: 288 HYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCY 347
+A G ++M++ + + + Y +L +L K + EE E+++++ EL C
Sbjct: 512 VFARSGETEKMLRLYRTMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEIIQDMELLCQ-M 570
Query: 348 DFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNS-WSIIAAGYADKNNME--KAF 404
V + IL+ + + + +LK+ +G P S WSI+ A + + E
Sbjct: 571 SLGVISTILI---KARCVSQGGKLLKKACLQGYKPDAKSLWSIMNAYVMTEKHEEGLSLL 627
Query: 405 ECMKE 409
EC+++
Sbjct: 628 ECIRD 632
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 3/139 (2%)
Query: 121 ESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGI 178
E T N + KL Y +LL + L +++ L ++M+ + Y+ +
Sbjct: 972 EEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMRSKSYQLNRSIYHMM 1031
Query: 179 MCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSH 238
M +Y N G H K ++L MKE+G+ P + I + SYG + ENVL ++S S
Sbjct: 1032 MKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPHEAENVLNSLKSSS- 1090
Query: 239 ISMDWGTYSTVANYYIIAG 257
+ + YSTV + Y+ G
Sbjct: 1091 LEVSTLPYSTVFDAYLKNG 1109
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 81/392 (20%), Positives = 151/392 (38%), Gaps = 54/392 (13%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
LY L+ C V L E+ + M+ +G S Y I+ Y G E ++ D
Sbjct: 677 LYEHLITCLVEAELFSEACQVFCDMQFIGIEASKNIYESIISTYCKLGFPETAHGLMDDA 736
Query: 199 KENGVPPDNFSYR-ICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
++G+P + S R I I +YG E +++ + S I D ++ + + Y +G
Sbjct: 737 LQSGIPLNILSCRVIIIEAYGNIKLWQQAEILVKGLRQASGI--DRRIWNALIHAYAESG 794
Query: 258 LKEKA-----------------------------------IIYLKKCEDI---VSKSKDA 279
L EKA + + + +D+ +SKS
Sbjct: 795 LYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVGELQDMDFKISKSTVL 854
Query: 280 LGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEE 339
L ++ +A G+ E+MK + K Y +M L + E M+ E
Sbjct: 855 L----MLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMTSLLCHHNRFRDVELMIAE 910
Query: 340 WELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNN 399
E + + D + N +L Y+ G ++ V + I++ G P ++++ + Y
Sbjct: 911 MEGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIVMYCRSLR 970
Query: 400 MEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQK--R 457
E+ F + E + PK S+L E+ + ++ K + R
Sbjct: 971 PEEGFTLLNEM-----GKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMRSKSYQLNR 1025
Query: 458 NMYHALTEAHIRSG--QEVDGLLESMKADDID 487
++YH + + + +G + + LL MK D I+
Sbjct: 1026 SIYHMMMKIYRNAGNHSKAENLLAVMKEDGIE 1057
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 129/329 (39%), Gaps = 46/329 (13%)
Query: 115 GKVRGLESAETYFNSLNDEDKVDK-LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
G ++ + AE L +D+ ++ AL++ Y GL +++ ++ M + G +
Sbjct: 757 GNIKLWQQAEILVKGLRQASGIDRRIWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVD 816
Query: 174 NYNGIMC----------LYTNTGQHEKI------PDVLL-------------------DM 198
+ NG+M LY G+ + + VLL M
Sbjct: 817 SVNGMMRALIVDGRLDELYVVVGELQDMDFKISKSTVLLMLDAFAKAGDVFEVMKIYNGM 876
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
K G P+ YR + + +E ++ EME + D ++++ N Y AG
Sbjct: 877 KAAGYLPNMHLYRSMTSLLCHHNRFRDVELMIAEMEG-AGFKPDLSIFNSLLNMYTAAGN 935
Query: 259 KEKAI-IYLKKCEDIVSKSKDALGYNHLISHYASLGNKDE---MMKFWGLQKIKCKKQLN 314
++ +Y E + +D YN LI Y +E ++ G + + K Q
Sbjct: 936 FDRTTQVYQSILEAGLEPDEDT--YNTLIVMYCRSLRPEEGFTLLNEMGKRGLTPKLQ-- 991
Query: 315 RDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
Y ++L + K E+A+++ EE Y + + ++++ Y G KA+ +L
Sbjct: 992 -SYKSLLAASAKAELREQADQLFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAV 1050
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
+ + G PT + I+ Y +A
Sbjct: 1051 MKEDGIEPTIATMHILMTSYGTAGQPHEA 1079
>gi|225432738|ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial [Vitis vinifera]
Length = 535
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 143/324 (44%), Gaps = 11/324 (3%)
Query: 64 GQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESA 123
G +S + +V+R+L R+K A++ M G+ +D + K +E A
Sbjct: 183 GGYVSLATMTKVMRRLARASRWKDAIEAFRGMERFGVKKDTLAMNTLMDALVKENSVEHA 242
Query: 124 ETYFNSLNDEDKVDK-LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLY 182
F D ++ + L++ + + +D +L M +MKE G ++Y I+ Y
Sbjct: 243 NDVFVEFKDSILLNPHTFNVLIHGWCKARKMDNALKSMAEMKEHGFCPDVISYTSIVEAY 302
Query: 183 TNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMD 242
K+ VL +M+E G PP+ +Y I +++ G E+S V ++M+ S + D
Sbjct: 303 CREKDFRKVNSVLNEMEEKGCPPNVVTYTIVMHALGKGKEISKALEVYEKMKGSSCVP-D 361
Query: 243 WGTYSTVANYYIIAG-LKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMM 299
YS++ AG LK+ ++ ED+ + D L YN +IS +++ +
Sbjct: 362 TSFYSSLIYILSKAGRLKDARDVF----EDMTKQGAIPDVLTYNTMISAACMHSQEEDAL 417
Query: 300 K-FWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLG 358
K +++ CK LN Y +L + ++ +L + + ++++ G
Sbjct: 418 KLLLKMEESSCKPDLNT-YSPLLKMCCRNNRMKVLSALLNHMFKNDISLEVGTYSLLVHG 476
Query: 359 YSQKGMIEKADAVLKEIVKKGKTP 382
+ G +E A +E+V KG P
Sbjct: 477 LCKSGKLEHACLFFEEMVSKGLVP 500
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 133/307 (43%), Gaps = 15/307 (4%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+ + G ++ L ++M+ + + YN ++ Y + ++ +L M
Sbjct: 206 YNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMG 265
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G+ P+ +Y + IN + VL EM+ + + D TY+T+ N Y G
Sbjct: 266 LEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKG-FAPDGVTYNTLVNGYCKVGNF 324
Query: 260 EKAIIY----LKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR 315
+A++ L+ D + Y LI+ GN + M+F+ ++ +
Sbjct: 325 HQALVLHSEMLRN-----GLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGV 379
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
Y +++ + G ++EA ++ +E S + N +L G+ G +E+A +L+ +
Sbjct: 380 TYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGM 439
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLG 435
KG +P S+S I AG+ +++AF+ E + K P SS++ L
Sbjct: 440 EGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMV-----EKGVSPDAITYSSLIQGLC 494
Query: 436 DNRDVEE 442
+ R + E
Sbjct: 495 EQRRLNE 501
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 124/274 (45%), Gaps = 30/274 (10%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ALLN + G ++E++ L++ M+ G ++Y+ I+ + + ++ + +M
Sbjct: 416 YNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMV 475
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E GV PD +Y I + L+ ++ QEM ++S + D TY+++ N Y G
Sbjct: 476 EKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLP-DEFTYTSLINGYCKEGDL 534
Query: 260 EKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
+A L ++++ K D + YN LI+ GL K ++ R
Sbjct: 535 NEA---LNLHDEMIKKGFLPDTVTYNVLIN---------------GLNKQARTREAKR-- 574
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL--GYSQKGMIEKADAVLKEI 375
L+K+ E + L C D +++ L G+ KG++ +AD V + +
Sbjct: 575 -----LLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESM 629
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
+K+ + P +++I G+ N+ KA + KE
Sbjct: 630 IKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKE 663
>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g31400, chloroplastic; Flags: Precursor
gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
Length = 918
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 150/337 (44%), Gaps = 14/337 (4%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTG-QHEKIPDVLLDM 198
+ AL++ Y R GL +E++S+ MKE G + + YN ++ G + +++ +M
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 199 KENGVPPDNFSYR--ICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
+ NGV PD ++ + + S G E + N+ EM ++ I D +Y+T+ +
Sbjct: 331 QRNGVQPDRITFNSLLAVCSRGGLWE--AARNLFDEMTNR-RIEQDVFSYNTLLDAICKG 387
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
G + A L + + + + Y+ +I +A G DE + +G +
Sbjct: 388 GQMDLAFEILAQMP-VKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVS 446
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y T+L K+G EEA +L E D N +L GY ++G ++ V E+
Sbjct: 447 YNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMK 506
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGD 436
++ P ++S + GY+ ++A E +E ++ R L S+++D L
Sbjct: 507 REHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREF-----KSAGLRADVVLYSALIDALCK 561
Query: 437 NRDVEEVEAFVSSLKIKVQKRNM--YHALTEAHIRSG 471
N V + + + + N+ Y+++ +A RS
Sbjct: 562 NGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSA 598
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 143/320 (44%), Gaps = 7/320 (2%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAET--YFNSLNDED-KVDKL-YGAL 143
A+ V M GL ++ + +D GK G+E + +F+ + + D++ + +L
Sbjct: 287 AISVFNSMKEYGLRPNLVTYNAVIDACGK-GGMEFKQVAKFFDEMQRNGVQPDRITFNSL 345
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
L R GL + + +L +M +YN ++ GQ + ++L M +
Sbjct: 346 LAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRI 405
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAI 263
P+ SY I+ + N+ EM I++D +Y+T+ + Y G E+A+
Sbjct: 406 MPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLG-IALDRVSYNTLLSIYTKVGRSEEAL 464
Query: 264 IYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGS 323
L++ + K KD + YN L+ Y G DE+ K + K + Y T++
Sbjct: 465 DILREMASVGIK-KDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDG 523
Query: 324 LVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPT 383
K G +EA ++ E++ + D + + ++ + G++ A +++ E+ K+G +P
Sbjct: 524 YSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPN 583
Query: 384 PNSWSIIAAGYADKNNMEKA 403
+++ I + M+++
Sbjct: 584 VVTYNSIIDAFGRSATMDRS 603
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 164/351 (46%), Gaps = 22/351 (6%)
Query: 70 LELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNS 129
++ R+ + K++ L + + M +G+A +++ ++ ++ + R L A F++
Sbjct: 89 IDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLA---FSA 145
Query: 130 LNDEDKVDKL--------YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCL 181
+ K+ KL + L+N EG V E+L L+ +M EMG + N ++
Sbjct: 146 MG---KIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNG 202
Query: 182 YTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISM 241
+G+ + ++ M E G P+ +Y +N + + +L++ME + +I +
Sbjct: 203 LCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKME-ERNIKL 261
Query: 242 DWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKF 301
D YS + + G + A + E + + + + YN LI + + G D+ K
Sbjct: 262 DAVKYSIIIDGLCKHGSLDNAFNLFNEME-MKGITTNIITYNILIGGFCNAGRWDDGAK- 319
Query: 302 WGLQKIKCKKQLNRDYIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLG 358
L + K+++N + +T ++ S VK G+L EAE++ +E D ++ G
Sbjct: 320 --LLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDG 377
Query: 359 YSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
+ ++ ++KA+ ++ +V KG P +++I+ GY N ++ E ++
Sbjct: 378 FCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRK 428
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 129/301 (42%), Gaps = 41/301 (13%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +++ + G +D + +L +M+ G + + YN ++ + N G+ + +L DM
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ + P+ ++ + I+S+ +L E + +EM + I+ D TY+++ + +
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG-IAPDTITYTSLIDGFCKENHL 384
Query: 260 EKAIIYLKKCEDIVSKSKDA--LGYNHLISHYASLGNKDEMMK----------------- 300
+KA + + +VSK D +N LI+ Y D+ ++
Sbjct: 385 DKAN---QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTY 441
Query: 301 ------FWGLQKIKCKKQLNRDYIT------------MLGSLVKIGELEEAEKMLEEWEL 342
F L K+ K+L ++ ++ +L L GE E+A ++ E+ E
Sbjct: 442 NTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 501
Query: 343 SCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEK 402
S D + NII+ G ++ A + + KG P +++I+ G K + +
Sbjct: 502 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSE 561
Query: 403 A 403
A
Sbjct: 562 A 562
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 66/323 (20%), Positives = 133/323 (41%), Gaps = 40/323 (12%)
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE--DKVDKLYG 141
+ + A ++ + M +G+A + +D K L+ A + + + D + +
Sbjct: 348 KLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFN 407
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
L+N Y + +D+ L L +KM G + YN ++ + G+ ++ +M
Sbjct: 408 ILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR 467
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
VPP+ +Y+I ++ E + +++E +S + +D G Y+ II G+
Sbjct: 468 KVPPNIVTYKILLDGLCDNGESEKALEIFEKIE-KSKMELDIGIYNI-----IIHGM--- 518
Query: 262 AIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITML 321
C SK DA + SL +K K + Y M+
Sbjct: 519 -------CN--ASKVDDAWDL------FCSL-------------PLKGVKPGVKTYNIMI 550
Query: 322 GSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKT 381
G L K G L EAE + + E + D NI++ + G K+ +++E+ + G +
Sbjct: 551 GGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFS 610
Query: 382 PTPNSWSIIAAGYADKNNMEKAF 404
++ ++ +D ++K+F
Sbjct: 611 VDASTIKMVIDMLSD-GRLKKSF 632
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 58/310 (18%), Positives = 137/310 (44%), Gaps = 29/310 (9%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ L++ +V+EG + E+ L ++M G + Y ++ + +K ++ M
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G P+ ++ I IN Y + + + ++M + ++ D TY+T +I G
Sbjct: 396 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVA-DTVTYNT-----LIQGFC 449
Query: 260 EKAIIYLKK--CEDIVSK--SKDALGYNHLISHYASLGNKDEMMKFWGLQKI-KCKKQLN 314
E + + K +++VS+ + + Y L+ G ++ ++ + +KI K K +L+
Sbjct: 450 ELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIF--EKIEKSKMELD 507
Query: 315 RDYITMLGSLVKIGELEEAEKMLEEWELSCYCY------DFRVPNIILLGYSQKGMIEKA 368
++ I + A K+ + W+L C + NI++ G +KG + +A
Sbjct: 508 IGIYNII-----IHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEA 562
Query: 369 DAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVS 428
+ + +++ + G P +++I+ + + K+ + ++E + + S +
Sbjct: 563 ELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEEL-----KRCGFSVDASTIK 617
Query: 429 SILDWLGDNR 438
++D L D R
Sbjct: 618 MVIDMLSDGR 627
>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
Length = 759
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/450 (20%), Positives = 198/450 (44%), Gaps = 23/450 (5%)
Query: 29 RAVKPVARNNLYSRISPLGDPDVSLTP-VLDQWVLEGQKISELELQRVIRQLRSRKRFKH 87
+ +KPV + + I P SL P +LDQ + + +L ++R+L +++
Sbjct: 47 KPIKPVLSSAVKHMIK---SPSPSLMPALLDQ--VSAHLLGPDDLPFIVRELGHSGQWEK 101
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQ--LDLIGKVRGLESAETYFNSLNDEDKVDKL--YGAL 143
++ +WM Q S D + +G++ + A+ F+ + + Y +L
Sbjct: 102 VVKSFDWMVLQQNLRSQWDKVTSTIISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSL 161
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
+ Y R G + +++ + + MK + + + YN ++ + G + + +M E G+
Sbjct: 162 ICAYGRSGKLAKAVEIFEAMKVVCK-PNLVVYNAVIDACSKGGDYPTALRIFREMLEQGM 220
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAI 263
PD ++ I++ G + + + EME + I+ D TY+T+ Y G
Sbjct: 221 SPDRITFNTLISAAGRANRWEECDRIFAEMEERG-IARDDVTYNTLIATYCRGGQMHLGA 279
Query: 264 IYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGS 323
++ + Y+ +I YA LG E + + + + + Y TM+
Sbjct: 280 ALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDI 339
Query: 324 LVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPT 383
++G +EA + E + + D N +L Y ++G +A ++L+E+ ++G +P
Sbjct: 340 HARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPN 399
Query: 384 PNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLV--SSILDWLGDNRDVE 441
++S + Y + F ++A+A+ ++ K +P +V S+++D N +
Sbjct: 400 ILTYSALIDAYC-----KHGFH--RDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPD 452
Query: 442 EVEAFVSSLKIKVQKRNM--YHALTEAHIR 469
E A + + + N+ Y++L +A+ R
Sbjct: 453 EALALLEEMADNGIRPNVITYNSLLDAYGR 482
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 121/273 (44%), Gaps = 10/273 (3%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ++N + G +L L++KM+E G + + YN I+ + D +M
Sbjct: 48 YSTIINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMV 107
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ G+PPD F+Y ++ + ++ ++ ++M ++ I + V +I GL
Sbjct: 108 KEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIP------NKVTFTILIDGLC 161
Query: 260 EKAIIYLK--KCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR 315
+K +I E + K D YN L+ Y S DE K + + K R
Sbjct: 162 KKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVR 221
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
Y ++ K G ++EA+ +L E D + ++ G+ Q G ++A +LKE+
Sbjct: 222 SYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEM 281
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAFECMK 408
G P ++SI+ G ++++AFE +K
Sbjct: 282 CSYGLLPNLITYSIVLDGLCKHGHLDEAFELLK 314
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 62/340 (18%), Positives = 135/340 (39%), Gaps = 39/340 (11%)
Query: 54 TPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDL 113
T + Q V +++ +I L ++ A V E M+ +GL V+ + +D
Sbjct: 135 TSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDG 194
Query: 114 IGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGS 171
++ A+ FN ++ + + Y L+N + + G +DE+ L+ +M
Sbjct: 195 YCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPD 254
Query: 172 ALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQ 231
Y+ +M + G+ ++ ++L +M G+ P+ +Y I ++ L +L+
Sbjct: 255 IFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLK 314
Query: 232 EMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYAS 291
M+ +S I N +I Y LI +
Sbjct: 315 AMQ-ESKIE---------PNIFI---------------------------YTILIEGMCT 337
Query: 292 LGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRV 351
G + + + +K + Y M+ L+K G EA ++ E ++ +
Sbjct: 338 FGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCT 397
Query: 352 PNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIA 391
N+I+ G+ + G A +++E+V KG + +++ +++
Sbjct: 398 YNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRMLS 437
>gi|356542070|ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Glycine max]
Length = 729
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 153/388 (39%), Gaps = 69/388 (17%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
V+R LR K AL+ +W +G + + + + L+++G+ R L A + S+
Sbjct: 81 VLRTLRLIKDPSKALRFFKWTQQKGFSHTPESYFIMLEILGRERNLNVARNFLFSIEKHS 140
Query: 135 K-----VDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHE 189
K D+ + +L+ Y GL ES+ L Q MK + S + +N +M + G+
Sbjct: 141 KGTVKLEDRFFNSLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTN 200
Query: 190 KIPDVLLDMKEN-GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYST 248
+V +M GV PD +Y + I + S + +EMES + D TY+T
Sbjct: 201 MAKEVYDEMLGTYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMES-FNCDADVVTYNT 259
Query: 249 VANYYIIAGLKEKAIIYL----KKCEDIVSKSKDALGYNHLISHYA-------------- 290
+ + AG A + KKCE + + + + Y LI Y
Sbjct: 260 LVDGLCRAGKVRIARNLVNGMGKKCEGL---NPNVVTYTTLIRGYCMKQEVEEALVVLEE 316
Query: 291 --SLGNKDEMMKFWGLQKIKC--------KKQLNR------------DYITMLGSLVKIG 328
S G K M+ + L K C K L R + T++ G
Sbjct: 317 MTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAG 376
Query: 329 ELEEAEKMLEEWELSCYCYDFRVP------NIILLGYSQKGMIEKADAVLKEIVKK---- 378
L+EA K+ E + FR+P + ++ QKG + A+ + E+ +K
Sbjct: 377 NLDEALKVFESMK------KFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILL 430
Query: 379 ---GKTPTPNSWSIIAAGYADKNNMEKA 403
G P S++ I + +KA
Sbjct: 431 SKFGSKPLAASYNPIFESLCEHGKTKKA 458
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 129/284 (45%), Gaps = 26/284 (9%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ++N Y + G + L L+++M+ G + YNG++ L TG+ + VL +M
Sbjct: 291 YSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMI 350
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G+ PD Y I+ + +SS + EM+ + IS D+ TY+ V I GL
Sbjct: 351 SEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRK-ISPDFITYTAV-----ICGLC 404
Query: 260 EKAIIYL--KKCEDIVSK--SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR 315
+ + K ++V K D + Y LI Y G +M + + L + L
Sbjct: 405 QTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEG---KMKEAFSLHNQMLQMGLTP 461
Query: 316 DYIT---MLGSLVKIGELEEAEKMLEE-----WELSCYCYDFRVPNIILLGYSQKGMIEK 367
+ +T + L K GE++ A ++L E EL+ Y Y N ++ G + G I++
Sbjct: 462 NIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTY-----NSLVNGLCKAGNIDQ 516
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
A ++K++ G P +++ + Y M +A E +++ L
Sbjct: 517 AVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQML 560
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 152/367 (41%), Gaps = 38/367 (10%)
Query: 49 PDV-SLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDH 107
PDV S + V++ + G ELQRV L++ E M +GL + + +
Sbjct: 286 PDVISYSTVINGYCQVG------ELQRV-------------LKLIEEMQIKGLKPNPYTY 326
Query: 108 AVQLDLIGKVRGLESAETYFNSLNDEDKVDK--LYGALLNCYVREGLVDESLSLMQKMKE 165
+ L+ K + AE + E +Y L++ + + G V + L +M++
Sbjct: 327 NGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQK 386
Query: 166 MGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSY---GARSE 222
+ Y ++C TG+ + + +M + PD +Y I+ Y G E
Sbjct: 387 RKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKE 446
Query: 223 LSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKK-CEDIVSKSKDALG 281
S+ N + +M +I TY+ +A+ G + A L + C +
Sbjct: 447 AFSLHNQMLQMGLTPNIV----TYTALADGLCKCGEVDTANELLHEMCRK--GLELNIYT 500
Query: 282 YNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEW- 340
YN L++ GN D+ +K ++ Y T++ + K E+ A ++L +
Sbjct: 501 YNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQML 560
Query: 341 --ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKN 398
EL F N+++ G+ GM+E + +LK +++KG P +++ + Y +N
Sbjct: 561 DRELQPTVVTF---NVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRN 617
Query: 399 NMEKAFE 405
NM E
Sbjct: 618 NMRATTE 624
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 121/259 (46%), Gaps = 12/259 (4%)
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
+L + + E+G + +YN I G+ + +LL M+ G PD SY IN
Sbjct: 237 ALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVIN 296
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK 275
Y EL + +++EM+ + + + TY+ V G +A L+ +++S+
Sbjct: 297 GYCQVGELQRVLKLIEEMQIKG-LKPNPYTYNGVILLLCKTGKVAEAERVLR---EMISE 352
Query: 276 --SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT---MLGSLVKIGEL 330
+ D + Y LI + LGN + + + K++++ D+IT ++ L + G +
Sbjct: 353 GIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQ---KRKISPDFITYTAVICGLCQTGRV 409
Query: 331 EEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSII 390
EA+K+ E D ++ GY ++G +++A ++ ++++ G TP +++ +
Sbjct: 410 MEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTAL 469
Query: 391 AAGYADKNNMEKAFECMKE 409
A G ++ A E + E
Sbjct: 470 ADGLCKCGEVDTANELLHE 488
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 119/308 (38%), Gaps = 28/308 (9%)
Query: 101 AFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL---------------YGALLN 145
AFS+H+ +Q+ L + + + D ++L Y +L+N
Sbjct: 447 AFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVN 506
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
+ G +D+++ LM+ M+ G A+ Y +M Y + + + ++L M + + P
Sbjct: 507 GLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQP 566
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTY-STVANYYIIAGLKEKAII 264
++ + +N + L E +L+ M + I + TY S + Y I ++ I
Sbjct: 567 TVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKG-IMPNATTYNSLIKQYCIRNNMRATTEI 625
Query: 265 YLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN---RDYITML 321
Y C V D YN LI + N E W L + K N Y ++
Sbjct: 626 YRGMCAKGV--VPDGNTYNILIKGHCKARNMKEA---WFLHRDMVGKGFNLTVSSYNALI 680
Query: 322 GSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK--- 378
K + EA ++ E+ D + NI +G +E + E ++K
Sbjct: 681 KGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLV 740
Query: 379 GKTPTPNS 386
G T N+
Sbjct: 741 GDIQTKNT 748
>gi|255660892|gb|ACU25615.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 481
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/431 (21%), Positives = 184/431 (42%), Gaps = 30/431 (6%)
Query: 79 LRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAETYFNSLN------ 131
L S K +HALQ W+ L + H ++++G+ L A +
Sbjct: 19 LHSSKTSEHALQFFXWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEW 78
Query: 132 DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
DED ++ +++ Y ++G+V ES+ + QKM+E+G + +YN + + G++
Sbjct: 79 DED----MWVMMIDSYGKQGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMA 134
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
M G+ P ++ + I + ++ + ++M+S+ IS D TY+T+ N
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR-EISPDVVTYNTMIN 193
Query: 252 -YYIIAGLKEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
YY + ++E +++ K +I + Y LI Y S+ D+ ++ K
Sbjct: 194 GYYRVKKMEEAEKYFVEMKGRNI---EPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFG 250
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEE-WELSCYCYDFRVPNIILLGYSQKGMIEKA 368
K Y T+L L ++ EA L+E + D + ++ + + G ++ A
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARVXLKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAA 310
Query: 369 DAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPK----- 423
VLK + + + ++ + +KA + + + + E++ RP+
Sbjct: 311 ADVLKAMXRLSVPTEAGHYGVLIENFCKXGQYDKAVKLLDKLI---EKDIILRPQSTLHL 367
Query: 424 -PSLVSSILDWLGDNRDVEEVEAFVSS-LKIKVQKRNMYHALTEAHIRSGQEVDG--LLE 479
PS + ++++L +N + E V LK+ VQ + L H + G LL+
Sbjct: 368 EPSAYNPMIEYLCNNGQAAKAETLVRQLLKLGVQDPTALNTLIRGHSQEGSPDSAFELLK 427
Query: 480 SMKADDIDEDK 490
M +D +K
Sbjct: 428 IMLRRKVDSEK 438
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 139/331 (41%), Gaps = 60/331 (18%)
Query: 116 KVRGLESAETYFNSL---NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
+V+ +E AE YF + N E V Y L+ YV VD++L L+++MK G +A
Sbjct: 197 RVKKMEEAEKYFVEMKGRNIEPTV-VTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNA 255
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENG----VPPDNFSYRICINSYGARSELSSMEN 228
+ Y+ ++ N EK+ + + +KE P DN + I+S+ L + +
Sbjct: 256 ITYSTLLPGLCNA---EKMSEARVXLKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAAD 312
Query: 229 VLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC--EDIVSKSKDAL-----G 281
VL+ M S + + G Y + + G +KA+ L K +DI+ + + L
Sbjct: 313 VLKAMXRLS-VPTEAGHYGVLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSA 371
Query: 282 YNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWE 341
YN +I + + G Q K + T++ L+K+G
Sbjct: 372 YNPMIEYLCNNG-----------QAAKAE--------TLVRQLLKLG------------- 399
Query: 342 LSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNME 401
D N ++ G+SQ+G + A +LK ++++ + ++ + Y KN
Sbjct: 400 ----VQDPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSXYNSLVQSYLKKNEPX 455
Query: 402 KAFECMKEALAVHEENKFWRPKPSLVSSILD 432
A K AL EN P SL S+++
Sbjct: 456 DA----KAALDSMIENDHL-PDSSLFRSVME 481
>gi|255660946|gb|ACU25642.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 484
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 93/421 (22%), Positives = 178/421 (42%), Gaps = 29/421 (6%)
Query: 79 LRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAETYFNSLN------ 131
L K +HALQ W+ L + H ++++G+ L A +
Sbjct: 19 LHGAKNXEHALQFFRWVERSNLFEHNRETHHKIIEILGRASKLNHARCILLDMPKKGLEW 78
Query: 132 DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
DED L+ L++ Y + G+V ES+ L QKM+E+G + +Y+ + + G++
Sbjct: 79 DED----LWVLLIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRYMMA 134
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYST-VA 250
M G P ++ I I + ++ + ++M+S+ I D TY+T +
Sbjct: 135 KRYFNKMLSEGNEPTRHTFNIMIWGFFLSGKVETANRFFEDMKSRE-IMPDVVTYNTMIX 193
Query: 251 NYYIIAGLKEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
YY + ++E +++ K +I + Y LI Y S+ D+ ++ K
Sbjct: 194 GYYRVKKMEEAEKYFVEMKGRNI---EPTVVTYTTLIKGYVSVDRVDDALRLVEEMKGFG 250
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEW-ELSCYCYDFRVPNIILLGYSQKGMIEKA 368
K Y T+L L ++ EA +L+E E D + ++ G + G ++ A
Sbjct: 251 IKPNAITYSTLLPGLCNAQKMSEARSILKEMVEKYITPTDNSIFLRLISGQCKAGDLDAA 310
Query: 369 DAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPK----- 423
VLK +++ + ++ Y ++A + + + E++ RP+
Sbjct: 311 ADVLKAMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDRLI---EKDIILRPQSTLHL 367
Query: 424 -PSLVSSILDWLGDNRDVEEVEAFVSSL-KIKVQKRNMYHALTEAHIRSGQEVDGLLESM 481
PS + ++++L +N + E+ V L K+ VQ +AL H + G D E +
Sbjct: 368 EPSAYNPLIEYLCNNGQTAKAESLVRQLMKLGVQDPTALNALIRGHSQEGSP-DSAFELL 426
Query: 482 K 482
K
Sbjct: 427 K 427
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 141/330 (42%), Gaps = 54/330 (16%)
Query: 116 KVRGLESAETYFNSL---NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
+V+ +E AE YF + N E V Y L+ YV VD++L L+++MK G +A
Sbjct: 197 RVKKMEEAEKYFVEMKGRNIEPTV-VTYTTLIKGYVSVDRVDDALRLVEEMKGFGIKPNA 255
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP-DNFSYRICINSYGARSELSSMENVLQ 231
+ Y+ ++ N + + +L +M E + P DN + I+ +L + +VL+
Sbjct: 256 ITYSTLLPGLCNAQKMSEARSILKEMVEKYITPTDNSIFLRLISGQCKAGDLDAAADVLK 315
Query: 232 EMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC--EDIVSKSKDAL-----GYNH 284
M S + + G Y + Y AG ++A+ L + +DI+ + + L YN
Sbjct: 316 AMIRLS-VPTEAGHYGVLIENYCKAGQYDQAVKLLDRLIEKDIILRPQSTLHLEPSAYNP 374
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSC 344
LI + + G Q K + +++ L+K+G
Sbjct: 375 LIEYLCNNG-----------QTAKAE--------SLVRQLMKLG---------------- 399
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
D N ++ G+SQ+G + A +LK ++++ +++ + Y K+ A
Sbjct: 400 -VQDPTALNALIRGHSQEGSPDSAFELLKIMLRRKARSEKSAYDSLVQSYLKKSEPADA- 457
Query: 405 ECMKEALAVHEENKFWRPKPSLVSSILDWL 434
K AL EN P P+L S+++ L
Sbjct: 458 ---KAALDSMIENGHL-PDPALFRSVMESL 483
>gi|255660920|gb|ACU25629.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
Length = 484
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 93/431 (21%), Positives = 182/431 (42%), Gaps = 30/431 (6%)
Query: 79 LRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAETYFNSLN------ 131
L K +HALQ W+ L + H ++++G+ L A +
Sbjct: 19 LHGSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEW 78
Query: 132 DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
DED ++ +++ Y +EG+V ES+ L QKM+E+G + +Y+ + + G+
Sbjct: 79 DED----MWVLMIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRFMMA 134
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
M G+ P + + I + ++ + ++M+S+ IS D TY+T+ N
Sbjct: 135 KRYFNKMLSEGIEPTRHXFNVMIWGFFLSGKVETANRFFEDMKSR-EISPDVITYNTMIN 193
Query: 252 -YYIIAGLKEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
YY + + E +++ K +I + Y LI Y S+ D+ ++ K
Sbjct: 194 GYYRVKKMDEAEKYFVEMKGRNI---EPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGYG 250
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEW-ELSCYCYDFRVPNIILLGYSQKGMIEKA 368
K Y T+L L ++ EA +L+E + D + ++ + G ++ A
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYMAPTDNSIFXRLISSQCKTGNLDAA 310
Query: 369 DAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPK----- 423
VLK +++ + ++ + +KA + + + + E++ RP+
Sbjct: 311 ADVLKAMIRLSVPTEAGHYGVLIENFCKAGQHDKAVKLLDKLI---EKDIILRPQSTLHM 367
Query: 424 -PSLVSSILDWLGDNRDVEEVEAFVSS-LKIKVQKRNMYHALTEAHIRSGQEVDG--LLE 479
PS + ++++L +N + EA V LK+ VQ + L H + G LL+
Sbjct: 368 EPSAYNPMIEYLCNNGQTAKAEALVRQLLKLGVQDPTALNTLIRGHSQEGSPDSAFELLK 427
Query: 480 SMKADDIDEDK 490
M +D +K
Sbjct: 428 IMLRRKVDSEK 438
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 161/392 (41%), Gaps = 34/392 (8%)
Query: 65 QKISELELQRVIRQ-------LRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQL---DLI 114
QK+ EL ++R I+ + R RF A + M +G+ + H V + L
Sbjct: 104 QKMEELGVERTIKSYDALFKVILRRGRFMMAKRYFNKMLSEGIEPTRHXFNVMIWGFFLS 163
Query: 115 GKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
GKV E+A +F + + + Y ++N Y R +DE+ +MK +
Sbjct: 164 GKV---ETANRFFEDMKSREISPDVITYNTMINGYYRVKKMDEAEKYFVEMKGRNIEPTV 220
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQE 232
+ Y ++ Y + Q + ++ +MK G+ P+ +Y + ++S ++L+E
Sbjct: 221 VTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKE 280
Query: 233 MESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASL 292
M + D + + + G + A LK + S +A Y LI ++
Sbjct: 281 MVDKYMAPTDNSIFXRLISSQCKTGNLDAAADVLKAMIRL-SVPTEAGHYGVLIENFCKA 339
Query: 293 GNKDEMMKFWGLQKIKCKKQLNRD----------YITMLGSLVKIGELEEAEKMLEEWEL 342
G D+ +K L K+ K + R Y M+ L G+ +AE ++ + L
Sbjct: 340 GQHDKAVKL--LDKLIEKDIILRPQSTLHMEPSAYNPMIEYLCNNGQTAKAEALVRQL-L 396
Query: 343 SCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEK 402
D N ++ G+SQ+G + A +LK ++++ +++ + Y KN
Sbjct: 397 KLGVQDPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKKNEPAD 456
Query: 403 AFECMKEALAVHEENKFWRPKPSLVSSILDWL 434
A K AL EN P SL S+ + L
Sbjct: 457 A----KAALDSMIENDHL-PDSSLFRSVXESL 483
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 119/273 (43%), Gaps = 16/273 (5%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+ Y REGL++E+ +M M + G S YN I+ G++ + +L++M
Sbjct: 156 YNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEML 215
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G+ PD +Y + R S + + EM Q + D ++S++ +
Sbjct: 216 NIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVP-DLVSFSSLIAVFSRNRHL 274
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGN-------KDEMMKFWGLQKIKCKKQ 312
++A++Y + + D + Y L+ Y GN +DEM++ + +
Sbjct: 275 DQALVYFRDMKKF-GLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIA--- 330
Query: 313 LNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
Y T+L L K L +A+K+ +E DF ++ G+ Q G + KA ++
Sbjct: 331 ----YNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLF 386
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
+ ++ P +++ + G+ MEKA E
Sbjct: 387 GTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASE 419
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 165/373 (44%), Gaps = 51/373 (13%)
Query: 82 RKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV--DKL 139
R F A ++ M QG+ + + + + + R L+ A YF + V + +
Sbjct: 236 RDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVI 295
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI---PDVLL 196
Y L++ Y R G + E+L + +M E G + YN I+ N EK+ D L
Sbjct: 296 YTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTIL----NGLCKEKMLTDADKLF 351
Query: 197 D-MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYII 255
D M E G PD +++ I+ + ++ ++ M +Q +I D Y+T+ + +
Sbjct: 352 DEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTM-TQRNIKPDIVAYNTLIDGFCK 410
Query: 256 AGLKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQ-------- 305
G EKA + + ++S+ + + Y LI+ Y S+G+ E + W +
Sbjct: 411 VGEMEKAS---ELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPT 467
Query: 306 --------KIKCK----------------KQLNRDYI---TMLGSLVKIGELEEAEKMLE 338
K C+ K + D+I T++ V+ +++A +
Sbjct: 468 LVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWIN 527
Query: 339 EWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKN 398
+ E D N+++ G+ ++G +++A+ VL+++++KG P ++++ + G+ ++
Sbjct: 528 KMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQD 587
Query: 399 NMEKAFECMKEAL 411
N+ +AF E L
Sbjct: 588 NLNEAFRFHDEML 600
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 119/276 (43%), Gaps = 30/276 (10%)
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
++N ++G D+ S + +M+ G + + YN ++ Y G E+ +++ M + G
Sbjct: 124 MVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKG 183
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
+ P F+Y IN + + + +L EM + +S D TY+T
Sbjct: 184 LKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIG-LSPDTTTYNT-------------- 228
Query: 263 IIYLKKC-EDIVSKSKDALG-------------YNHLISHYASLGNKDEMMKFWGLQKIK 308
+ ++ C D S++K+ G ++ LI+ ++ + D+ + ++ K
Sbjct: 229 -LLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKF 287
Query: 309 CKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKA 368
N Y ++ + G + EA K+ +E D N IL G ++ M+ A
Sbjct: 288 GLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDA 347
Query: 369 DAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
D + E+V++G P +++ + G+ NM KA
Sbjct: 348 DKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKAL 383
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 118/282 (41%), Gaps = 20/282 (7%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y LL R E+ + +M G ++++ ++ +++ ++ DMK
Sbjct: 226 YNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMK 285
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL- 258
+ G+ PDN Y + ++ Y + + EM Q + +D Y+T+ N GL
Sbjct: 286 KFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCV-LDVIAYNTILN-----GLC 339
Query: 259 KEKAIIYLKKCED-IVSKSK--DALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR 315
KEK + K D +V + D + LI + GN + + +G + K
Sbjct: 340 KEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIV 399
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLG-----YSQKGMIEKADA 370
Y T++ K+GE+E+A ++ W+ F PN I G Y G + +A
Sbjct: 400 AYNTLIDGFCKVGEMEKASEL---WDGMISRKIF--PNHITYGILINAYCSVGHVSEAFR 454
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
+ +++KG PT + + + GY + KA E + +A
Sbjct: 455 LWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIA 496
>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
Length = 760
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 91/450 (20%), Positives = 198/450 (44%), Gaps = 23/450 (5%)
Query: 29 RAVKPVARNNLYSRISPLGDPDVSLTP-VLDQWVLEGQKISELELQRVIRQLRSRKRFKH 87
+ +KPV + + I P SL P +LDQ + + +L ++R+L +++
Sbjct: 48 KPIKPVLSSAVKHMIK---SPSPSLMPALLDQ--VSAHLLGPDDLPFIVRELGHSGQWEK 102
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQ--LDLIGKVRGLESAETYFNSLNDEDKVDKL--YGAL 143
++ +WM Q S D + +G++ + A+ F+ + + Y +L
Sbjct: 103 VVKSFDWMVLQQNLRSQWDKVTSTIISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSL 162
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
+ Y R G + +++ + + MK + + + YN ++ + G + + +M E G+
Sbjct: 163 ICAYGRSGKLAKAVEIFEAMKVVCK-PNLVVYNAVIDACSKGGDYPTALRIFREMLEQGM 221
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAI 263
PD ++ I++ G + + + EME + I+ D TY+T+ Y G
Sbjct: 222 SPDRITFNTLISAAGRANRWEECDRIFAEMEERG-IARDDVTYNTLIATYCRGGQMHLGA 280
Query: 264 IYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGS 323
++ + Y+ +I YA LG E + + + + + Y TM+
Sbjct: 281 ALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDI 340
Query: 324 LVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPT 383
++G +EA + E + + D N +L Y ++G +A ++L+E+ ++G +P
Sbjct: 341 HARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPN 400
Query: 384 PNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLV--SSILDWLGDNRDVE 441
++S + Y + F ++A+A+ ++ K +P +V S+++D N +
Sbjct: 401 ILTYSALIDAYC-----KHGFH--RDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPD 453
Query: 442 EVEAFVSSLKIKVQKRNM--YHALTEAHIR 469
E A + + + N+ Y++L +A+ R
Sbjct: 454 EALALLEEMADNGIRPNVITYNSLLDAYGR 483
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 121/272 (44%), Gaps = 14/272 (5%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+N + + E+ L+++M E G +A+ +N ++ Y G+ + + + M+
Sbjct: 351 YNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKME 410
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E+G PD +Y IN Y + + EM + ++ MD T +T+ +
Sbjct: 411 ESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEM-GRKNMKMDSVTLNTILRTLC----R 465
Query: 260 EKAIIYLKKCEDIVSKSK------DALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQL 313
EK L++ ++S ++ D + Y LI Y GN D +K W K K
Sbjct: 466 EKK---LEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPS 522
Query: 314 NRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
Y ++G L + G+ E+A L E S D N IL GY ++G +EKA
Sbjct: 523 TVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHN 582
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
++V+ P + +I+ G + +EKA +
Sbjct: 583 KMVENSFKPDVFTCNILLRGLCMEGMLEKALK 614
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 95/212 (44%), Gaps = 16/212 (7%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
YG L+ Y ++G VD +L L +MKE S + YN I+ G+ E+ L ++
Sbjct: 491 YGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELL 550
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E+G+ PD +Y ++ Y ++ +M S D T + + + G+
Sbjct: 551 ESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENS-FKPDVFTCNILLRGLCMEGML 609
Query: 260 EKAIIYLKKCEDIVSKSK--DALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
EKA LK VSK K D + YN LI+ G D+ + +K+L D+
Sbjct: 610 EKA---LKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEME---EKELGPDH 663
Query: 318 IT---MLGSLVKIGELEEAE----KMLEEWEL 342
T ++ +L G + EAE KMLE+ L
Sbjct: 664 YTYNAIITALTDSGRIREAEEFMSKMLEKGXL 695
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 86/423 (20%), Positives = 167/423 (39%), Gaps = 69/423 (16%)
Query: 36 RNNLYSRISPLGDPDVSLT-PVLDQWVLEGQKISELELQRVIRQLRSRKRFKHAL----Q 90
R++L+ I L P +L + +V GQ ++ + +++LR R
Sbjct: 120 RHDLHLSILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNS 179
Query: 91 VSEWMSGQGLAFS--VHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYV 148
+ + S ++FS + A++L ++ V FN + +YG Y
Sbjct: 180 LVRYPSSHSVSFSREAFNDAIKLGIVPNVNT-------FNIV--------IYG-----YC 219
Query: 149 REGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNF 208
E +++ + M + + YN I+ G+ D+L+DMK G+ P+
Sbjct: 220 LENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRN 279
Query: 209 SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKK 268
+Y I + Y L NV+ E+ +Q+++ D TY+ + N G E+A
Sbjct: 280 TYNILVYGYCKMGWLKEAANVI-ELMTQNNLLPDVWTYNMLINGLCNEGRIEEAF----- 333
Query: 269 CEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIG 328
K +D + L+ S Y T++ ++
Sbjct: 334 ------KLRDEMENLKLLPDVVS-------------------------YNTLINGCLEWS 362
Query: 329 ELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWS 388
++ EA K+LEE + NI++ Y ++G ++ A + ++ + G +P +++
Sbjct: 363 KISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYN 422
Query: 389 IIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVS 448
+ GY NM +AF M E K + +++IL L + +EE +S
Sbjct: 423 TLINGYCKAGNMGEAFRTMDEM-----GRKNMKMDSVTLNTILRTLCREKKLEEAYKLLS 477
Query: 449 SLK 451
S +
Sbjct: 478 SAR 480
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 121/272 (44%), Gaps = 14/272 (5%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+N + + E+ L+++M E G +A+ +N ++ Y G+ + + + M+
Sbjct: 351 YNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKME 410
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E+G PD +Y IN Y + + EM + ++ MD T +T+ +
Sbjct: 411 ESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEM-GRKNMKMDSVTLNTILRTLC----R 465
Query: 260 EKAIIYLKKCEDIVSKSK------DALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQL 313
EK L++ ++S ++ D + Y LI Y GN D +K W K K
Sbjct: 466 EKK---LEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPS 522
Query: 314 NRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
Y ++G L + G+ E+A L E S D N IL GY ++G +EKA
Sbjct: 523 TVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHN 582
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
++V+ P + +I+ G + +EKA +
Sbjct: 583 KMVENSFKPDVFTCNILLRGLCMEGVLEKALK 614
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 122/272 (44%), Gaps = 2/272 (0%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+ Y + G + E+ ++++ M + YN ++ N G+ E+ + +M+
Sbjct: 281 YNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEME 340
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ PD SY IN S++S +L+EM S+ + + T++ + +Y G
Sbjct: 341 NLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEM-SEKGVKPNAVTHNIMVKWYCKEGKM 399
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
+ A + K E+ S D + YN LI+ Y GN E + K K + T
Sbjct: 400 DDASNTITKMEE-SGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNT 458
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
+L +L + +LEEA K+L Y D +++GY + G +++A + E+ +K
Sbjct: 459 ILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKE 518
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
P+ +++ I G E+A + E L
Sbjct: 519 IIPSTVTYNCIIGGLCQCGKTEQAISKLNELL 550
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 95/212 (44%), Gaps = 16/212 (7%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
YG L+ Y ++G VD +L L +MKE S + YN I+ G+ E+ L ++
Sbjct: 491 YGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELL 550
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E+G+ PD +Y ++ Y ++ +M S D T + + + G+
Sbjct: 551 ESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENS-FKPDVFTCNILLRGLCMEGVL 609
Query: 260 EKAIIYLKKCEDIVSKSK--DALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
EKA LK VSK K D + YN LI+ G D+ + +K+L D+
Sbjct: 610 EKA---LKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEME---EKELGPDH 663
Query: 318 IT---MLGSLVKIGELEEAE----KMLEEWEL 342
T ++ +L G + EAE KMLE+ L
Sbjct: 664 YTYNAIITALTDSGRIREAEEFMSKMLEKGNL 695
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 86/423 (20%), Positives = 167/423 (39%), Gaps = 69/423 (16%)
Query: 36 RNNLYSRISPLGDPDVSLT-PVLDQWVLEGQKISELELQRVIRQLRSRKRFKHAL----Q 90
R++L+ I L P +L + +V GQ ++ + +++LR R
Sbjct: 120 RHDLHLSILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNS 179
Query: 91 VSEWMSGQGLAFS--VHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYV 148
+ + S ++FS + A++L ++ V FN + +YG Y
Sbjct: 180 LVRYPSSHSVSFSREAFNDAIKLGIVPNVNT-------FNIV--------IYG-----YC 219
Query: 149 REGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNF 208
E +++ + M + + YN I+ G+ D+L+DMK G+ P+
Sbjct: 220 LENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRN 279
Query: 209 SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKK 268
+Y I + Y L NV+ E+ +Q+++ D TY+ + N G E+A
Sbjct: 280 TYNILVYGYCKMGWLKEAANVI-ELMTQNNLLPDVWTYNMLINGLCNEGRIEEAF----- 333
Query: 269 CEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIG 328
K +D + L+ S Y T++ ++
Sbjct: 334 ------KLRDEMENLKLLPDVVS-------------------------YNTLINGCLEWS 362
Query: 329 ELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWS 388
++ EA K+LEE + NI++ Y ++G ++ A + ++ + G +P +++
Sbjct: 363 KISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYN 422
Query: 389 IIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVS 448
+ GY NM +AF M E K + +++IL L + +EE +S
Sbjct: 423 TLINGYCKAGNMGEAFRTMDEM-----GRKNMKMDSVTLNTILRTLCREKKLEEAYKLLS 477
Query: 449 SLK 451
S +
Sbjct: 478 SAR 480
>gi|255660908|gb|ACU25623.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 481
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 183/433 (42%), Gaps = 34/433 (7%)
Query: 79 LRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLI---GKVRGLESAETYFNSLN---- 131
L S K +HALQ W+ L F HB L +I G+ L A +
Sbjct: 19 LHSAKTSEHALQFFRWVERSNL-FE-HBRETHLKIIEILGRASKLNHARCILLDMPKKGL 76
Query: 132 --DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHE 189
DED ++ +++ Y ++G+V ES+ L QKM+E+G + +Y+ + + G++
Sbjct: 77 EWDED----MWVMMIDSYGKQGIVQESVKLFQKMEELGVERTLKSYDALFKVILRRGRYM 132
Query: 190 KIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTV 249
M G+ P + + I + ++ + ++M+S+ IS D TY+T+
Sbjct: 133 MAKRYFNKMLSEGIEPTRXXFNVLIWGFFLSGKVETANRFFEDMKSR-EISPDVVTYNTM 191
Query: 250 AN-YYIIAGLKEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKI 307
N YY + ++E +++ K +I + Y LI Y S+ D+ ++ K
Sbjct: 192 INGYYRVKKMEEAEKYFVEMKGRNI---EPTVVTYTTLIKGYVSVDQVDDALRLXEEMKG 248
Query: 308 KCKKQLNRDYITMLGSLVKIGELEEAEKMLEEW-ELSCYCYDFRVPNIILLGYSQKGMIE 366
K Y T+L L ++ EA +L+E + D + ++ G ++
Sbjct: 249 FGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYLAPTDNSIFMRLITSQCTSGHLD 308
Query: 367 KADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPK--- 423
A VLK +++ + ++ + ++A + + + + E++ RP+
Sbjct: 309 AASDVLKAMIRLSVPTEAGHYGVLIENFCKXGQYDQAVKLLDKLI---EKDIILRPQSTL 365
Query: 424 ---PSLVSSILDWLGDNRDVEEVEAFVSS-LKIKVQKRNMYHALTEAHIRSGQEVDG--L 477
PS + ++++L +N + E V LK+ VQ + L H + G L
Sbjct: 366 HLEPSAYNPMIEYLCNNGQAAKAETLVRQLLKLGVQDPTALNTLIRGHSQEGSPDSAFEL 425
Query: 478 LESMKADDIDEDK 490
L+ M +D +K
Sbjct: 426 LKIMLRRKVDSEK 438
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 137/328 (41%), Gaps = 54/328 (16%)
Query: 116 KVRGLESAETYFNSL---NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
+V+ +E AE YF + N E V Y L+ YV VD++L L ++MK G +A
Sbjct: 197 RVKKMEEAEKYFVEMKGRNIEPTV-VTYTTLIKGYVSVDQVDDALRLXEEMKGFGIKPNA 255
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP-DNFSYRICINSYGARSELSSMENVLQ 231
+ Y+ ++ N + + +L +M + + P DN + I S L + +VL+
Sbjct: 256 ITYSTLLPGLCNAEKMSEARSILKEMVDKYLAPTDNSIFMRLITSQCTSGHLDAASDVLK 315
Query: 232 EMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC--EDIVSKSKDAL-----GYNH 284
M S + + G Y + + G ++A+ L K +DI+ + + L YN
Sbjct: 316 AMIRLS-VPTEAGHYGVLIENFCKXGQYDQAVKLLDKLIEKDIILRPQSTLHLEPSAYNP 374
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSC 344
+I + + G Q K + T++ L+K+G
Sbjct: 375 MIEYLCNNG-----------QAAKAE--------TLVRQLLKLG---------------- 399
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
D N ++ G+SQ+G + A +LK ++++ ++++ + Y +N A
Sbjct: 400 -VQDPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKRNEPADA- 457
Query: 405 ECMKEALAVHEENKFWRPKPSLVSSILD 432
K AL EN P +L S+++
Sbjct: 458 ---KAALDSMIENDHL-PDSALFRSVME 481
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 92/431 (21%), Positives = 179/431 (41%), Gaps = 22/431 (5%)
Query: 29 RAVKP--VARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFK 86
+ +KP V L S + G D ++ D+ V G K + +I+ R +F
Sbjct: 324 KGMKPDVVTYTTLISGLDRAGKIDAAIVE-YDEMVRNGCKPNLCTYNALIKMHGVRGKFP 382
Query: 87 HALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLES-AETYFNSLNDEDKVDK--LYGAL 143
+ V + G + L + G+ GL+S F + + + Y +L
Sbjct: 383 EMMAVFDEFRSAGFVPDIVTWNTLLAVFGQ-NGLDSEVSGVFKEMKKAGYIPERDTYVSL 441
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
++ Y R GL D ++ + ++M E G + YN ++ G+ E+ + +M+E
Sbjct: 442 ISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDC 501
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL--KEK 261
PD +SY +++Y L M+ + ++ S+ +W + V + L EK
Sbjct: 502 KPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEK 561
Query: 262 AIIYL--KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
A + L K+C S D N ++S Y ++ K L K Y +
Sbjct: 562 AFLELRQKRC------SLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNS 615
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
++ ++G+ E+ E +L E + S D N ++ Y +KG +++A + E+ G
Sbjct: 616 LMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSG 675
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRD 439
P +++I Y + E+A E ++ + + +P +SI++ N
Sbjct: 676 LKPDVVTYNIFVKSYVSNSMFEEAIELVRYMV-----TQGCKPNERTYNSIVEGYCRNGK 730
Query: 440 VEEVEAFVSSL 450
+ + + FVS+L
Sbjct: 731 LTDAKIFVSNL 741
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 90/404 (22%), Positives = 174/404 (43%), Gaps = 14/404 (3%)
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGK--VRGLESAETYFNSLNDEDKVDK-LY 140
RF+ A+ V M G+ ++ + V L + K V E E + D+ Y
Sbjct: 169 RFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTY 228
Query: 141 GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKE 200
L++C R L E+ + +MK G + +N ++ +Y +H++ +V+ +M+
Sbjct: 229 NTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMER 288
Query: 201 NGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKE 260
G PP +Y I+SY L + QEME + + D TY+T+ + AG +
Sbjct: 289 VGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKG-MKPDVVTYTTLISGLDRAGKID 347
Query: 261 KAIIYLKKCEDIVSKSKDAL-GYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
AI+ E + + K L YN LI + G EMM + + + T
Sbjct: 348 AAIVEYD--EMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNT 405
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
+L + G E + +E + + Y + ++ YS+ G+ + A + K +++ G
Sbjct: 406 LLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAG 465
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRD 439
P ++++ + + A E+A E L E + +P SS+L + +
Sbjct: 466 IYPDVSTYNAVLSALARGGRWEQA-----EKLFAEMEERDCKPDEYSYSSLLHAYANAKR 520
Query: 440 VEEVEAFVSSLKIKVQKRNMYHALTEAHIRSGQEVDGLLESMKA 483
+++++A S I ++ ++ L + + +V+ L E+ KA
Sbjct: 521 LDKMKAL--SDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKA 562
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/398 (20%), Positives = 162/398 (40%), Gaps = 32/398 (8%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I+ L KR + AL M +G V+ + + + L A + + + +
Sbjct: 17 LIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRN 76
Query: 135 KVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+ Y L++ + G VDE+++L+ KM++ +A+ YN ++ + +
Sbjct: 77 LTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGLCKAERASEAY 135
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
D+L +M +G PD F+Y I + + V +++ ++ D TYS + +
Sbjct: 136 DLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARG-FRPDVVTYSCLIDG 194
Query: 253 YIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQ 312
G ++AI + S + + YN LIS + +G DE M
Sbjct: 195 LCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSP 254
Query: 313 LNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
Y T++ K+ L++A +L + D ++ G ++ + A +L
Sbjct: 255 DVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHIL 314
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECM------------------------- 407
E+ +K +PT +++ I GY N +E+A + M
Sbjct: 315 GEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNR 374
Query: 408 -KEALAVHEENKFWRPKPSLV--SSILDWLGDNRDVEE 442
EA+ + EE + R P +V ++++D L + V+E
Sbjct: 375 SSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDE 412
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 157/365 (43%), Gaps = 34/365 (9%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
+L++ V G +I K+ AL+V E + +G V ++ +D +
Sbjct: 137 LLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLC 196
Query: 116 KVRGLESAETYFNSLNDEDKV---DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
K L+ A F + Y +L++ + R G +DE+++L+++M E GS
Sbjct: 197 KEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDV 256
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQE 232
+ Y +M + + + D+L M G+ PD ++ ++ + LS ++L E
Sbjct: 257 VTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGE 316
Query: 233 MESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASL 292
M +S S TY+T+ + Y A E+A ++ + D + + +N +I +
Sbjct: 317 MRRKS-CSPTVYTYNTILDGYCRANQLEEARKFMLEEMDC---PPNVVSFNIMIRGLCKV 372
Query: 293 GNKDEMMKFWGLQKIKCKKQLNRD---YITMLGSLVKIGELEEA----EKMLEEWELSCY 345
E M+ + +++ N D Y T++ L + +++EA KMLEE
Sbjct: 373 NRSSEAMELVEEAR---RRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGC--- 426
Query: 346 CYDFRVPNII-----LLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNM 400
+PN I + G GM+++A + ++KG P +++++ + N
Sbjct: 427 -----LPNSITYSTLVTGLCNAGMLDRA----RGYIEKGCVPNIGTYNLLIDAFRKANRD 477
Query: 401 EKAFE 405
E A E
Sbjct: 478 EDARE 482
>gi|255660916|gb|ACU25627.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 484
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 106/459 (23%), Positives = 197/459 (42%), Gaps = 45/459 (9%)
Query: 52 SLTPVLDQW----VLEGQKISELELQRVIRQLRSRKRFKH----ALQVSEWMSGQGLAFS 103
+L P DQ VL G K SE LQ R + F+H L++ E + G+ L +
Sbjct: 5 NLVPSFDQELVYNVLHGAKTSEHALQ-FFRWVERSNLFEHNRDTHLKIIEIL-GRALKLN 62
Query: 104 VHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKM 163
H + LD+ K GLE DED ++ +++ Y + G+V ES+ L QKM
Sbjct: 63 -HARCILLDMPKK--GLEW---------DED----MWVLMIDSYGKAGIVQESVKLFQKM 106
Query: 164 KEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSEL 223
+E+G + +Y+ + + G+ M G+ P ++ + I + ++
Sbjct: 107 EELGVERTIKSYDALFKVIMRRGRFMMAKRYFNKMLSEGIEPTRHTFNVLIWGFFLSGKV 166
Query: 224 SSMENVLQEMESQSHISMDWGTYSTVAN-YYIIAGLKEKAIIYLK-KCEDIVSKSKDALG 281
+ ++M+S+ IS D TY+T+ N Y + + E +++ K +I +
Sbjct: 167 DTANRFFEDMKSR-EISPDVVTYNTMINGCYRVKKMDEAEKYFVEMKGRNI---EPTVVS 222
Query: 282 YNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEW- 340
Y LI Y S+ D+ ++ K K Y T+L L G++ EA+ +L+E
Sbjct: 223 YTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCDAGKMSEAQSILKEMV 282
Query: 341 ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNM 400
+ D + ++ + G + A VLK +++ + ++ +
Sbjct: 283 DKYIAPKDNSIFMRLISSQCEAGNLGAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQH 342
Query: 401 EKAFECMKEALAVHEENKFWRPK------PSLVSSILDWLGDNRDVEEVEAFVSS-LKIK 453
+KA + + + + E++ RP+ PS + ++++L +N + EA V LK+
Sbjct: 343 DKAVKLLDKLI---EKDIILRPQSTLHMEPSAYNPMIEYLCNNGQTAKAEALVRQLLKLG 399
Query: 454 VQKRNMYHALTEAHIRSGQEVDG--LLESMKADDIDEDK 490
VQ + L H + G LL+ M +D +K
Sbjct: 400 VQDSTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEK 438
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 140/330 (42%), Gaps = 54/330 (16%)
Query: 116 KVRGLESAETYFNSL---NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
+V+ ++ AE YF + N E V Y L+ YV VD++L L+++MK G +A
Sbjct: 197 RVKKMDEAEKYFVEMKGRNIEPTVVS-YTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNA 255
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP-DNFSYRICINSYGARSELSSMENVLQ 231
+ Y+ ++ + G+ + +L +M + + P DN + I+S L + +VL+
Sbjct: 256 ITYSTLLPGLCDAGKMSEAQSILKEMVDKYIAPKDNSIFMRLISSQCEAGNLGAAADVLK 315
Query: 232 EMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC--EDIVSKSKDAL-----GYNH 284
M S + + G Y + + AG +KA+ L K +DI+ + + L YN
Sbjct: 316 AMIRLS-VPTEAGHYGVLIENFCKAGQHDKAVKLLDKLIEKDIILRPQSTLHMEPSAYNP 374
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSC 344
+I + + G Q K + ++ L+K+G
Sbjct: 375 MIEYLCNNG-----------QTAKAE--------ALVRQLLKLG---------------- 399
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
D N ++ G+SQ+G + A +LK ++++ +++ + Y KN A
Sbjct: 400 -VQDSTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKKNEPADA- 457
Query: 405 ECMKEALAVHEENKFWRPKPSLVSSILDWL 434
K AL EN P SL S+++ L
Sbjct: 458 ---KAALGSMIENDHL-PDSSLFRSVMESL 483
>gi|449484944|ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g16010-like [Cucumis sativus]
Length = 637
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 150/326 (46%), Gaps = 7/326 (2%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAET-YFNSLNDEDKVDK-LYGALLN 145
AL++ E M G+G A +V + + +GKV ++ A + +FN L D K D L L+N
Sbjct: 284 ALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLIN 343
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM-CLYTNTGQHEKIPDVLLDMKENGVP 204
R G ++++L L KM + + + YN ++ ++ + + MK NG+
Sbjct: 344 ILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIA 403
Query: 205 PDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAII 264
P +F+Y I I+ + + + +L+EM+ + Y ++ + A E A
Sbjct: 404 PSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCP-AAYCSLIDSLGRAKRYEAANE 462
Query: 265 YLKKCEDIVSKSKDALGYNHLISHYASLGN-KDEMMKFWGLQKIKCKKQLNRDYITMLGS 323
++ ++ +S A Y +I H+ + G D + F +K+ C + Y ++
Sbjct: 463 LFQELKENCGRS-SARVYAVMIKHFGNCGRLSDAVDLFCEXEKLGCSPDV-YTYNALMSG 520
Query: 324 LVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPT 383
+++ G ++EA ++ + D + NIIL G ++ G ++A + ++ + P
Sbjct: 521 MIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPD 580
Query: 384 PNSWSIIAAGYADKNNMEKAFECMKE 409
S++ I + + E A + M+E
Sbjct: 581 AVSYNTILSCLSRAGMFEMAAKLMRE 606
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 137/313 (43%), Gaps = 31/313 (9%)
Query: 152 LVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM-KENGVPPDNFSY 210
+V+++LS+ ++K +A YN ++ + + G HEKI ++ ++ E PD +Y
Sbjct: 174 MVNKALSVFYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITY 233
Query: 211 RICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCE 270
I+++G + EM+ ++ + Y+T+ Y E A L+ E
Sbjct: 234 SALISAFGKLERYDFAFRLFDEMK-ENGLHPTEKIYTTILAMYFKLNKVEAA---LRLVE 289
Query: 271 DIVSK--SKDALGYNHLISHYASLGNKDEMMK-FWGLQKIKCKKQ--LNRDYITMLGSLV 325
++ K + Y LI +G D+ F+ + K CK L + I +LG
Sbjct: 290 EMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILG--- 346
Query: 326 KIGELEEAEKMLEEWE-LSCYCYDFRVPNIILLGYSQKGMIE-KADAV-----LKEIVKK 378
+ G LE+A K+ + + L C PN++ K + E KA A +++
Sbjct: 347 RAGRLEDALKLFGKMDSLQC------APNVVTYNTVIKAIFESKAPASEAALWFEKMKAN 400
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNR 438
G P+ +++I+ G+ N +EKA ++E + K + P P+ S++D LG +
Sbjct: 401 GIAPSSFTYAILIDGFCKTNRVEKALLLLEEM-----DEKGFPPCPAAYCSLIDSLGRAK 455
Query: 439 DVEEVEAFVSSLK 451
E LK
Sbjct: 456 RYEAANELFQELK 468
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 134/337 (39%), Gaps = 40/337 (11%)
Query: 107 HAVQLDLIGKVRGLESAETYFNSL--NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMK 164
++ + GK+ + A F+ + N +K+Y +L Y + V+ +L L+++MK
Sbjct: 233 YSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMK 292
Query: 165 EMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELS 224
G + Y ++ G+ + + +M ++G PD IN G L
Sbjct: 293 GKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLE 352
Query: 225 SMENVLQEMESQSHISMDWGTYSTV--ANYYIIAGLKEKAIIYLKKCEDIVSKSK----- 277
+ +M+S + + TY+TV A + A E A+ + K + ++ S
Sbjct: 353 DALKLFGKMDSL-QCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAI 411
Query: 278 ---------------------DALGYNHLISHYASLGNKDEMMKFWG-----LQKIK--C 309
D G+ + Y SL + K + Q++K C
Sbjct: 412 LIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENC 471
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEWE-LSCYCYDFRVPNIILLGYSQKGMIEKA 368
+ R Y M+ G L +A + E E L C D N ++ G + GMI++A
Sbjct: 472 GRSSARVYAVMIKHFGNCGRLSDAVDLFCEXEKLGC-SPDVYTYNALMSGMIRAGMIDEA 530
Query: 369 DAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
++++ + + G TP S +II G A ++A E
Sbjct: 531 HSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIE 567
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y AL++ +R G++DE+ SLM+ M+E G ++N I+ TG ++ ++ MK
Sbjct: 514 YNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMK 573
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTV 249
E+ + PD SY ++ +++EM+ + D TYS++
Sbjct: 574 ESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKG-FEYDSITYSSI 622
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 103/242 (42%), Gaps = 7/242 (2%)
Query: 93 EWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE--DKVDKLYGALLNCYVRE 150
E M G+A S +A+ +D K +E A ++++ Y +L++ R
Sbjct: 395 EKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRA 454
Query: 151 GLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSY 210
+ + L Q++KE SA Y ++ + N G+ D+ + ++ G PD ++Y
Sbjct: 455 KRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEXEKLGCSPDVYTY 514
Query: 211 RICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCE 270
++ + ++++ M ++ + D +++ + N G ++AI K +
Sbjct: 515 NALMSGMIRAGMIDEAHSLMRNMR-ENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMK 573
Query: 271 DIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGEL 330
+ DA+ YN ++S + G + K K+ K D IT L +G++
Sbjct: 574 E-SEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKL---KGFEYDSITYSSILEAVGKV 629
Query: 331 EE 332
+E
Sbjct: 630 DE 631
>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
Length = 970
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 97/434 (22%), Positives = 182/434 (41%), Gaps = 27/434 (6%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
V D+ V G K VIR L K F A + WM S+ + V + +
Sbjct: 205 VFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLC 264
Query: 116 KVRGLESAETYFNSLND----EDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGS 171
K G+ A SL + ED V Y L+ + R D+ + LM +M E+G +
Sbjct: 265 KGGGVLEALEVRKSLREKGLKEDVVT--YCTLVLGFCRVQQFDDGICLMNEMVELGFVPT 322
Query: 172 ALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQ 231
+G++ G + D+++ + G P+ F Y IN+ +L E + +
Sbjct: 323 EAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYK 382
Query: 232 EMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKK-CEDIVSKSKDALGYNHLISHYA 290
M S + + ++ TYS + + + G+ + A Y + ED + ++ YN LI+ +
Sbjct: 383 NMHSMN-LPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRET--IYPYNSLINGHC 439
Query: 291 SLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKM---LEEWELSCYCY 347
G+ + + + + T++ K ++E+A K+ + E E++ Y
Sbjct: 440 KFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVY 499
Query: 348 DFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECM 407
F ++ G + +A + E+V++ PT +++++ GY +NM+KAFE +
Sbjct: 500 TFTA---LIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELL 556
Query: 408 KEAL--AVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRN--MYHAL 463
++ L + + +RP ++ L V + F+ L K K N Y AL
Sbjct: 557 EDMLHNGLVPDTYTYRP-------LISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSAL 609
Query: 464 TEAHIRSGQEVDGL 477
+ G+ + L
Sbjct: 610 LHGYCGQGRLTEAL 623
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 71/365 (19%), Positives = 150/365 (41%), Gaps = 13/365 (3%)
Query: 54 TPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDL 113
+ + D+ V K +E+ +I A ++ E M GL + + +
Sbjct: 518 SKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISG 577
Query: 114 IGKVRGLESAETYFNSLNDED-KVDKL-YGALLNCYVREGLVDESLS----LMQKMKEMG 167
+ + +A+ + + L+ ++ K++++ Y ALL+ Y +G + E+LS ++Q+ M
Sbjct: 578 LCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMD 637
Query: 168 SFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSME 227
A+ +G M +++ +L M + G+ PD+ Y I++Y
Sbjct: 638 LVCHAVLIDGAM----KQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSG 693
Query: 228 NVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLIS 287
L M ++ + TY+ N G ++A +K + S +++ Y +
Sbjct: 694 ECLDLMVTEKCFP-NVVTYTAFMNGLCKVGEIDRAGHLFEKML-TANISPNSVTYGCFLD 751
Query: 288 HYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCY 347
GN E + +K Y ++ K+G L EA K+L E +
Sbjct: 752 SLTKEGNMKEATDLHH-EMLKGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFP 810
Query: 348 DFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECM 407
D + I+ + + G + A + +++KG P +++++ G ++KAFE
Sbjct: 811 DCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELR 870
Query: 408 KEALA 412
+ L+
Sbjct: 871 NDMLS 875
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/398 (20%), Positives = 162/398 (40%), Gaps = 32/398 (8%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I+ L KR + AL M +G V+ + + + L A + + + +
Sbjct: 17 LIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRN 76
Query: 135 KVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+ Y L++ + G VDE+++L+ KM++ +A+ YN ++ + +
Sbjct: 77 LTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGLCKAERASEAY 135
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
D+L +M +G PD F+Y I + + V +++ ++ D TYS + +
Sbjct: 136 DLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARG-FRPDVVTYSCLIDG 194
Query: 253 YIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQ 312
G ++AI + S + + YN LIS + +G DE M
Sbjct: 195 LCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSP 254
Query: 313 LNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
Y T++ K+ L++A +L + D ++ G ++ + A +L
Sbjct: 255 DVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHIL 314
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECM------------------------- 407
E+ +K +PT +++ I GY N +E+A + M
Sbjct: 315 GEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNR 374
Query: 408 -KEALAVHEENKFWRPKPSLV--SSILDWLGDNRDVEE 442
EA+ + EE + R P +V ++++D L + V+E
Sbjct: 375 SSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDE 412
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 157/365 (43%), Gaps = 34/365 (9%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
+L++ V G +I K+ AL+V E + +G V ++ +D +
Sbjct: 137 LLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLC 196
Query: 116 KVRGLESAETYFNSLNDEDKV---DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
K L+ A F + Y +L++ + R G +DE+++L+++M E GS
Sbjct: 197 KEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDV 256
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQE 232
+ Y +M + + + D+L M G+ PD ++ ++ + LS ++L E
Sbjct: 257 VTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGE 316
Query: 233 MESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASL 292
M +S S TY+T+ + Y A E+A ++ + D + + +N +I +
Sbjct: 317 MRRKS-CSPTVYTYNTILDGYCRANQLEEARKFMLEEMDC---PPNVVSFNIMIRGLCKV 372
Query: 293 GNKDEMMKFWGLQKIKCKKQLNRD---YITMLGSLVKIGELEEA----EKMLEEWELSCY 345
E M+ + +++ N D Y T++ L + +++EA KMLEE
Sbjct: 373 NRSSEAMELVEEAR---RRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGC--- 426
Query: 346 CYDFRVPNII-----LLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNM 400
+PN I + G GM+++A + ++KG P +++++ + N
Sbjct: 427 -----LPNSITYSTLITGLCNAGMLDRA----RGYIEKGCVPNIGTYNLLIDAFRKANRD 477
Query: 401 EKAFE 405
E A E
Sbjct: 478 EDARE 482
>gi|255581580|ref|XP_002531595.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528791|gb|EEF30798.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 176
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 64/118 (54%), Gaps = 2/118 (1%)
Query: 333 AEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAA 392
EK+ EEWE YD R+PNI++ Y +KG++EKA+ + + +G+ P +W +A
Sbjct: 19 GEKIFEEWESRKLKYDIRIPNILISTYLRKGLMEKAETFVNRAISEGRKPDAITWYYLAT 78
Query: 393 GYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL 450
GY N EKA E MK+AL V + ++S L++L D+E+ E + L
Sbjct: 79 GYLQNNQTEKAVEMMKKALEVSGSKL--KSSSESLASCLEYLKGKGDLEKAEELIKLL 134
>gi|326511196|dbj|BAJ87612.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 725
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 127/271 (46%), Gaps = 11/271 (4%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+Y ++N Y + ++E+ L +MKE G + + YN +M Y+ Q E + +LL+M
Sbjct: 380 IYNTIMNVYCKCSQIEEAEGLFAEMKEKGLKPTKVTYNILMDAYSRRLQPEVVESLLLEM 439
Query: 199 KENGVPPDNFSYRICINSYGARSELS-SMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
+ G P+ SY I++YG + ++S E+ M+ + I +Y+++ Y ++G
Sbjct: 440 HDLGFQPNARSYNCLISAYGRQKKMSEKAEDAFLRMK-KGGIKATSSSYTSLICAYAVSG 498
Query: 258 LKEKA-IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGL---QKIKCKKQL 313
EKA I YL + + S + Y L+ + GN +++M+ W +K+ C +
Sbjct: 499 QYEKAHIAYLDMKREGLKPSLET--YTALLDIFRRAGNTEKLMETWKSMTDEKVGCTRV- 555
Query: 314 NRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
+ +L L K G +A ++ E+ NI++ Y++ G K +LK
Sbjct: 556 --TFHMVLDGLAKHGLFVQARDVICEFGKIGLPPTAMTYNILMNAYAKGGQHYKLPQLLK 613
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
E+ P ++S + YA + +AF
Sbjct: 614 EMSTLELKPDSVTYSTLIYAYARVRDFSRAF 644
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 121/282 (42%), Gaps = 27/282 (9%)
Query: 141 GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKE 200
+L+ + EG+ E+L +M + G + YN IM +Y Q E+ + +MKE
Sbjct: 347 ASLIKIFCDEGMKKEALIFQSEMGKRGIPSNTSIYNTIMNVYCKCSQIEEAEGLFAEMKE 406
Query: 201 NGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKE 260
G+ P +Y I +++Y R + +E++L EM D G +Y +
Sbjct: 407 KGLKPTKVTYNILMDAYSRRLQPEVVESLLLEMH-------DLGFQPNARSYNCLISAYG 459
Query: 261 KAIIYLKKCEDIVSKSK------DALGYNHLISHYASLGNKDEM-MKFWGLQKIKCKKQL 313
+ +K ED + K + Y LI YA G ++ + + +++ K L
Sbjct: 460 RQKKMSEKAEDAFLRMKKGGIKATSSSYTSLICAYAVSGQYEKAHIAYLDMKREGLKPSL 519
Query: 314 NRDYITMLGSLVKIGELEEAEKMLEEW------ELSCYCYDFRVPNIILLGYSQKGMIEK 367
Y +L + G EK++E W ++ C F +++L G ++ G+ +
Sbjct: 520 E-TYTALLDIFRRAG---NTEKLMETWKSMTDEKVGCTRVTF---HMVLDGLAKHGLFVQ 572
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
A V+ E K G PT +++I+ YA K + +KE
Sbjct: 573 ARDVICEFGKIGLPPTAMTYNILMNAYAKGGQHYKLPQLLKE 614
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 109/258 (42%), Gaps = 6/258 (2%)
Query: 149 REGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNF 208
R + DE L ++ + F A+ YN M G+++ + M++N V PD+
Sbjct: 249 RARMADEILEILGSLPPERGFREAVLYNAAMSGVAYCGRYDDAWKIFESMEKNNVQPDHV 308
Query: 209 SYRICINSYGARSELSSMENVLQEMESQSHISMDW--GTYSTVANYYIIAGLKEKAIIYL 266
+ I + R +S ++ + + + + W G +++ + G+K++A+I+
Sbjct: 309 TSSIMLLVMKRRK--ASAKDSWKFFQRMNRKGVKWSLGVSASLIKIFCDEGMKKEALIFQ 366
Query: 267 KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVK 326
+ S ++ YN +++ Y +E + K K K Y ++ + +
Sbjct: 367 SEMGKRGIPSNTSI-YNTIMNVYCKCSQIEEAEGLFAEMKEKGLKPTKVTYNILMDAYSR 425
Query: 327 IGELEEAEKMLEEWELSCYCYDFRVPNIILLGYS-QKGMIEKADAVLKEIVKKGKTPTPN 385
+ E E +L E + + R N ++ Y QK M EKA+ + K G T +
Sbjct: 426 RLQPEVVESLLLEMHDLGFQPNARSYNCLISAYGRQKKMSEKAEDAFLRMKKGGIKATSS 485
Query: 386 SWSIIAAGYADKNNMEKA 403
S++ + YA EKA
Sbjct: 486 SYTSLICAYAVSGQYEKA 503
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 92/431 (21%), Positives = 179/431 (41%), Gaps = 22/431 (5%)
Query: 29 RAVKP--VARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFK 86
+ +KP V L S + G D ++ D+ V G K + +I+ R +F
Sbjct: 342 KGMKPDVVTYTTLISGLDRAGKIDAAIVE-YDEMVRNGCKPNLCTYNALIKMHGVRGKFP 400
Query: 87 HALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLES-AETYFNSLNDEDKVDK--LYGAL 143
+ V + G + L + G+ GL+S F + + + Y +L
Sbjct: 401 EMMAVFDEFRSAGFVPDIVTWNTLLAVFGQ-NGLDSEVSGVFKEMKKAGYIPERDTYVSL 459
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
++ Y R GL D ++ + ++M E G + YN ++ G+ E+ + +M+E
Sbjct: 460 ISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDC 519
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL--KEK 261
PD +SY +++Y L M+ + ++ S+ +W + V + L EK
Sbjct: 520 KPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEK 579
Query: 262 AIIYL--KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
A + L K+C S D N ++S Y ++ K L K Y +
Sbjct: 580 AFLELRQKRC------SLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNS 633
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
++ ++G+ E+ E +L E + S D N ++ Y +KG +++A + E+ G
Sbjct: 634 LMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSG 693
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRD 439
P +++I Y + E+A E ++ + + +P +SI++ N
Sbjct: 694 LKPDVVTYNIFVKSYVSNSMFEEAIELVRYMV-----TQGCKPNERTYNSIVEGYCRNGK 748
Query: 440 VEEVEAFVSSL 450
+ + + FVS+L
Sbjct: 749 LTDAKIFVSNL 759
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 90/404 (22%), Positives = 174/404 (43%), Gaps = 14/404 (3%)
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGK--VRGLESAETYFNSLNDEDKVDK-LY 140
RF+ A+ V M G+ ++ + V L + K V E E + D+ Y
Sbjct: 187 RFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTY 246
Query: 141 GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKE 200
L++C R L E+ + +MK G + +N ++ +Y +H++ +V+ +M+
Sbjct: 247 NTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMER 306
Query: 201 NGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKE 260
G PP +Y I+SY L + QEME + + D TY+T+ + AG +
Sbjct: 307 VGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKG-MKPDVVTYTTLISGLDRAGKID 365
Query: 261 KAIIYLKKCEDIVSKSKDAL-GYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
AI+ E + + K L YN LI + G EMM + + + T
Sbjct: 366 AAIVEYD--EMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNT 423
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
+L + G E + +E + + Y + ++ YS+ G+ + A + K +++ G
Sbjct: 424 LLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAG 483
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRD 439
P ++++ + + A E+A E L E + +P SS+L + +
Sbjct: 484 IYPDVSTYNAVLSALARGGRWEQA-----EKLFAEMEERDCKPDEYSYSSLLHAYANAKR 538
Query: 440 VEEVEAFVSSLKIKVQKRNMYHALTEAHIRSGQEVDGLLESMKA 483
+++++A S I ++ ++ L + + +V+ L E+ KA
Sbjct: 539 LDKMKAL--SDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKA 580
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/413 (20%), Positives = 182/413 (44%), Gaps = 29/413 (7%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE- 133
+I L ++R K A + E +G +V + +D + K +E+A T ++ +
Sbjct: 36 LIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHF 95
Query: 134 --DKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
Y L++ R+ VD+ L+++M G +A+ YN ++ G+ ++
Sbjct: 96 GFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEA 155
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM-ESQSHISMDWGTYSTVA 250
+L M NG PP+ ++ + I E+ + V+ EM +S +S D T+++V
Sbjct: 156 FSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVL 215
Query: 251 NYYIIAGL-KEKAIIYLKKCEDIVSKS------KDALGYNHLISHYASLGNKDEMMKFWG 303
+ GL KE+ I+ ++ ++ + + Y+ LI + + DE ++
Sbjct: 216 D-----GLCKEQRIL---DAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLA 267
Query: 304 -LQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQK 362
+ ++ C+ Y T++ L+K+G +E+A +L + + D N ++ G+ ++
Sbjct: 268 KMVELGCRAN-TVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKR 326
Query: 363 GMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRP 422
+ +A +L+E+++ G P+ +++ + G ++A E + A + P
Sbjct: 327 QRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAA-----RGCAP 381
Query: 423 KPSLVSSILDWLGDNRDVEEVEAFVSSL---KIKVQKRNMYHALTEAHIRSGQ 472
SSI+D L V E + + ++ Y AL + ++G+
Sbjct: 382 NAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGK 434
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 128/285 (44%), Gaps = 31/285 (10%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L++ + +DE+L L+ KM E+G + + Y+ ++ G+ E VL M+
Sbjct: 246 YSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMR 305
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEM-ESQSHISMDWGTYSTVANYYIIAGL 258
+ G PD +Y I+ + R L +L+EM E+ H S+ TY+T+ + +G
Sbjct: 306 DAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVV--TYTTLCHGLCRSGR 363
Query: 259 KEKAIIYL-----KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQL 313
++A+ L + C + +A+ Y+ ++ G E + ++ +++
Sbjct: 364 FDEAVEILDYMAARGC------APNAITYSSIVDGLCKAGRVTEALGYF--------EKM 409
Query: 314 NRD---------YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGM 364
RD Y ++ L K G+++EA + LE + D +I++ G G
Sbjct: 410 ARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGR 469
Query: 365 IEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
I+ + + + ++G P +++ + + +++AF+ ++
Sbjct: 470 IDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQ 514
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 78/169 (46%), Gaps = 4/169 (2%)
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDK---LY 140
RF A+++ ++M+ +G A + ++ +D + K + A YF + ++ V Y
Sbjct: 363 RFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAY 422
Query: 141 GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKE 200
AL++ + G +DE+ +++M G + ++ ++ + G+ + ++ M E
Sbjct: 423 SALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAE 482
Query: 201 NGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTV 249
G PD +Y ++ S + ++ Q+M S +S D T T+
Sbjct: 483 RGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDG-LSPDRSTRRTM 530
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 136/329 (41%), Gaps = 47/329 (14%)
Query: 111 LDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGS 168
+D + K R ++ A T F + D+ + YGAL++ ++ V E+ L ++ + G
Sbjct: 2 IDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGC 61
Query: 169 FGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN-GVPPDNFSYRICINSYGARSELSSME 227
+ + YN ++ G+ E + DM + G P +Y I+ E+
Sbjct: 62 HPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGC 121
Query: 228 NVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLIS 287
+L+EM + + + TY+T+ N + G +SK+A L+
Sbjct: 122 KLLEEMAGRG-CAPNAVTYNTLVNALLGQG-----------------RSKEAF---SLLE 160
Query: 288 HYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWEL--SCY 345
A+ G E++ F + K CK+ GE+E A ++++E + S
Sbjct: 161 QMAANGCPPELITFGLIIKGLCKE----------------GEIEAAFRVVDEMFMIESGL 204
Query: 346 CYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
D N +L G ++ I A V K +++G P ++S + G + M++A +
Sbjct: 205 SPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQ 264
Query: 406 CMKEALAVHEENKFWRPKPSLVSSILDWL 434
+ + + + R S+++D L
Sbjct: 265 LLAKMVELG-----CRANTVTYSTVVDGL 288
>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 927
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 135/321 (42%), Gaps = 16/321 (4%)
Query: 99 GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV--DKLYGALLNCYVREGLVDES 156
GL +V +++ +D K E A F+ + DE+ V D Y +N + G E+
Sbjct: 518 GLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEA 577
Query: 157 LSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINS 216
+++K E G L YN IM + G +M E+GV P+ +Y IN
Sbjct: 578 QDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLING 637
Query: 217 YGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS 276
+ + + EM ++ + +D Y + + + E A + D S
Sbjct: 638 FCKNNNTDLALKMRNEMRNKG-LELDIAAYGALIDGFCKKQDIETASWLFSELLD-GGLS 695
Query: 277 KDALGYNHLISHYASLGNKDEMMKFWGLQK------IKCKKQLNRDYITMLGSLVKIGEL 330
+++ YN LIS Y +L N + + LQK I C Q Y T++ L+K G L
Sbjct: 696 PNSVIYNSLISGYRNLNNMEAALN---LQKRMLGEGISCDLQ---TYTTLIDGLLKEGRL 749
Query: 331 EEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSII 390
A + E D + +++ G KG +E A +L E+ + TP ++ +
Sbjct: 750 VLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNAL 809
Query: 391 AAGYADKNNMEKAFECMKEAL 411
AG+ N+++AF E L
Sbjct: 810 IAGHFKAGNLQEAFRLHNEML 830
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 119/278 (42%), Gaps = 12/278 (4%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +LL+ +EG + E+ +L QKM + G + ++YN ++ + G + V DM
Sbjct: 456 YNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDML 515
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ G+ P+ +Y I ++ Y + V M ++ + D+ TY+ N G
Sbjct: 516 DCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDF-TYNIKINGLCKVGRT 574
Query: 260 EKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD- 316
+A LKK V K L YN ++ + G+ + + + C+ ++ +
Sbjct: 575 SEAQDMLKK---FVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAY---REMCESGVSPNV 628
Query: 317 --YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
Y T++ K + A KM E D ++ G+ +K IE A + E
Sbjct: 629 ITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSE 688
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
++ G +P ++ + +GY + NNME A K L
Sbjct: 689 LLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLG 726
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 77/366 (21%), Positives = 146/366 (39%), Gaps = 51/366 (13%)
Query: 116 KVRGLESAETYFNSLNDEDKVD--KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
K L A FN L + D V K LL V+ ++ E+ + +KM G G
Sbjct: 186 KANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYEKMVLKGVHGDCF 245
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
+ +M E+ L+ K GV D +Y I I ++ ++ +L++M
Sbjct: 246 TVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDM 305
Query: 234 ESQSHISMDWGTYSTVANYYIIAG-------LKEKAII----------------YLKKCE 270
+ + + GT+++V + G LK++ + Y K+ +
Sbjct: 306 RDKGWVPSE-GTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQ-D 363
Query: 271 DIVS------------KSKDALGYNHLISHYASLGNKDEMMKFWGL-QKIKCKKQLNRDY 317
+VS S + + Y LI GN M K + L ++K K +
Sbjct: 364 KLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGN---MAKAYDLYTQMKNKNICPTVF 420
Query: 318 I--TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
I +++ +K+ EEA K+ +E ++C + N +L ++G + +A + +++
Sbjct: 421 IVNSLIRGFLKVESREEASKLFDE-AVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKM 479
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLG 435
+ KG PT S++ + G+ + N++ A + L +P S ++D
Sbjct: 480 LDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCG-----LKPNVITYSILMDGYF 534
Query: 436 DNRDVE 441
N D E
Sbjct: 535 KNGDTE 540
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 146/339 (43%), Gaps = 43/339 (12%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLN--- 131
+IR L R R AL V + M +G + SV +++ LD K G A + +
Sbjct: 257 LIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKG 316
Query: 132 -DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEK 190
+ D V Y L+N EG VDE+L+++ + G A+ Y ++ + + ++
Sbjct: 317 CEPDIVT--YNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKE 374
Query: 191 IPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVA 250
+ ++L +M N PD ++ + S + + V+ M ++ D TYS+
Sbjct: 375 VEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVA-DIVTYSS-- 431
Query: 251 NYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCK 310
I+ GL + V + DA+ L+S S G K + +
Sbjct: 432 ---ILDGLCD------------VGRVDDAV---ELLSRLKSYGCKPDTIA---------- 463
Query: 311 KQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADA 370
Y T+L L + E AE+++ E S D N ++ QKG++++A
Sbjct: 464 ------YTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIR 517
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
V++++ + G +P +++ I G +++ ++ A E + +
Sbjct: 518 VVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSD 556
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/306 (19%), Positives = 126/306 (41%), Gaps = 15/306 (4%)
Query: 148 VREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDN 207
++GLVD ++ ++++M E G + YN I+ N + ++L D++ G PD
Sbjct: 507 CQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDI 566
Query: 208 FSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLK 267
++ + E ++ M +S+ D T++TV GL +AI LK
Sbjct: 567 VTFNTLLKGLCGVDRWEDAEQLMANM-MRSNCPPDELTFNTVITSLCQKGLLTQAIETLK 625
Query: 268 KCEDIVSKS---KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSL 324
I++++ ++ Y+ ++ G ++ + Y T++ +L
Sbjct: 626 ----IMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNGTPDLIT--YNTVISNL 679
Query: 325 VKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTP 384
K G++EEA +L + C D + G ++ ++A +L+ + G +P
Sbjct: 680 TKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDT 739
Query: 385 NSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVE 444
++ + G+ + A +C H + P S +L+ L ++E +
Sbjct: 740 TFYNDVLLGFCRDRRTDLAIDCF-----AHMVSSGCMPDESTYVILLEALAYGGLLDEAK 794
Query: 445 AFVSSL 450
++SL
Sbjct: 795 RLLASL 800
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 163/382 (42%), Gaps = 50/382 (13%)
Query: 63 EGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLES 122
+G K + + +I L A+ + M +G+ V ++ L + L
Sbjct: 226 KGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNE 285
Query: 123 AETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM- 179
A FN + + + + L++ +EG+V E+ + + M + G+ +A YN +M
Sbjct: 286 ATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMD 345
Query: 180 --CLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS 237
CL + +K+ D+++D G P SY I IN Y R L +++L EM S+
Sbjct: 346 GYCLNNQMDEAQKVLDIMVD---KGCAPVVHSYNILINGYCKRRRLDEAKSLLVEM-SEK 401
Query: 238 HISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDE 297
++ D TYST ++ GL C+ V + ++AL +L S G +
Sbjct: 402 ELTPDTVTYST-----LMQGL----------CQ--VGRPQEAL---NLFKEMCSSGLLPD 441
Query: 298 MMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL 357
+M Y T+L L K G L+EA K+L+ + S D + NI++
Sbjct: 442 LMT----------------YSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIE 485
Query: 358 GYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEEN 417
G G +E A + ++ G PT +++I+ G + ++A+E ++ E+
Sbjct: 486 GMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKM-----ED 540
Query: 418 KFWRPKPSLVSSILDWLGDNRD 439
+ P + I+ N+D
Sbjct: 541 DGFLPNSCSYNVIIQGFLQNQD 562
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 147/356 (41%), Gaps = 21/356 (5%)
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
L+NC R V ++S++ KM ++G A+ +N ++ G+ ++ + +M G
Sbjct: 133 LINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRG 192
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
PD SY IN S +L++ME + + Y+T+ + L A
Sbjct: 193 HQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKG-CKPNLVAYTTIIDSLCKDTLVNDA 251
Query: 263 IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLG 322
+ L + D D + Y+ ++ + SLG+ +E + + + ++
Sbjct: 252 MDLLSEMVD-RGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVD 310
Query: 323 SLVKIGELEEAEKMLEEW-----ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
L K G + EA + E E + Y Y N ++ GY +++A VL +V
Sbjct: 311 GLCKEGMVSEARCVFEAMTKKGAEPNAYTY-----NALMDGYCLNNQMDEAQKVLDIMVD 365
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGD- 436
KG P +S++I+ GY + +++A ++L V K P S+++ L
Sbjct: 366 KGCAPVVHSYNILINGYCKRRRLDEA-----KSLLVEMSEKELTPDTVTYSTLMQGLCQV 420
Query: 437 NRDVEEVEAFVSSLKIKVQKRNM-YHALTEAHIRSGQ--EVDGLLESMKADDIDED 489
R E + F + M Y L + + G E LL+SM+ I+ D
Sbjct: 421 GRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPD 476
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 130/275 (47%), Gaps = 11/275 (4%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L++ Y ++G VDE+ L ++M +G S YN ++ + + ++ ++ M
Sbjct: 46 YNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMA 105
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWG-TYSTVANYYIIAGL 258
E G PD +Y I S L V + +E H ++ G + +TVA +I GL
Sbjct: 106 EKGFEPDVVTYSTII------SGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGL 159
Query: 259 KEKAII--YLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN 314
+ I K E++ SK D + YN ++S +G E +F+ +
Sbjct: 160 CKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDV 219
Query: 315 RDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
Y +L +L K G+ +EA K+ ++ Y D N ILLG ++K +++A+ + K+
Sbjct: 220 VAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKK 279
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
+V G P ++SI+ +G+ ++ A + ++E
Sbjct: 280 MVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEE 314
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 123/269 (45%), Gaps = 7/269 (2%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL-DM 198
Y +LLN + +E + E++ L + M E G + Y+ I+ TG+ + ++L M
Sbjct: 81 YNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKM 140
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
E G + +Y IN + +L+EM S+ ++ D TY+T+ + G
Sbjct: 141 IERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVP-DNITYNTILSGLCRMGK 199
Query: 259 KEKAIIYLKKCEDIVSK--SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
+A + + + S+ S D + YN L+ G DE MK + K
Sbjct: 200 VSEAKQFF---DSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVT 256
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y ++L L + ++EAE+M ++ S + +I+L G+ + ++ A VL+E+
Sbjct: 257 YNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMS 316
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
K G P +++I+ G N ++KA E
Sbjct: 317 KIGAVPDVVTYNILLDGLCKTNLVDKAHE 345
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 147/355 (41%), Gaps = 13/355 (3%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
+ +Q + G +E +I + R A ++ E M GL S++ + L+
Sbjct: 30 LFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFC 89
Query: 116 KVRGLESAETYFNSLNDE----DKVDKLYGALLNCYVREGLVDESLS-LMQKMKEMGSFG 170
K ++ A F ++ ++ D V Y +++ + G V E+L L KM E G
Sbjct: 90 KETKMKEAMELFKTMAEKGFEPDVV--TYSTIISGLCKTGKVTEALEMLFHKMIERGCSA 147
Query: 171 SALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVL 230
+ + YN ++ E+ +L +M G PDN +Y ++ ++S +
Sbjct: 148 NTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFF 207
Query: 231 QEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS--KDALGYNHLISH 288
M S+ + S D Y+ + + G ++A+ K D+++K D + YN ++
Sbjct: 208 DSMPSRGY-SPDVVAYNGLLDALYKEGKTDEAMKLFK---DVIAKGYMPDTVTYNSILLG 263
Query: 289 YASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYD 348
A N DE + + Y +L + ++++A K+LEE D
Sbjct: 264 LARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPD 323
Query: 349 FRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
NI+L G + +++KA + +V G P S+S++ G N + A
Sbjct: 324 VVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDA 378
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 126/275 (45%), Gaps = 5/275 (1%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ +L + ++G + + L ++M + G + YN ++ Y G+ ++ + +M
Sbjct: 11 FRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMV 70
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G+ P ++Y +N++ +++ + + M ++ D TYST+ + G
Sbjct: 71 SVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTM-AEKGFEPDVVTYSTIISGLCKTGKV 129
Query: 260 EKAI--IYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
+A+ ++ K E S + + YN LI+ N + K K N Y
Sbjct: 130 TEALEMLFHKMIER--GCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITY 187
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
T+L L ++G++ EA++ + Y D N +L ++G ++A + K+++
Sbjct: 188 NTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIA 247
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
KG P +++ I G A K+NM++A E K+ +A
Sbjct: 248 KGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVA 282
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/373 (19%), Positives = 158/373 (42%), Gaps = 19/373 (5%)
Query: 18 KTNLEIF-TRAYRAVKP--VARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQR 74
K +E+F T A + +P V + + S + G +L + + + G + +
Sbjct: 95 KEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNA 154
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I L + + A ++ E M+ +G + L + ++ + A+ +F+S+
Sbjct: 155 LINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRG 214
Query: 135 KVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+ Y LL+ +EG DE++ L + + G + YN I+ ++
Sbjct: 215 YSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAE 274
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
++ M +G P+ +Y I ++ + ++ VL+EM + D TY+ + +
Sbjct: 275 EMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVP-DVVTYNILLDG 333
Query: 253 YIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKI---KC 309
L +KA ++ S D ++S+ L + K + +
Sbjct: 334 LCKTNLVDKA-------HELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMI 386
Query: 310 KKQLNRDYIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIE 366
+++L D +T ++ L K G+L+EA+ +L++ S D+ N ++ G ++G
Sbjct: 387 ERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHI 446
Query: 367 KADAVLKEIVKKG 379
+AD + + + +KG
Sbjct: 447 QADRLTQAMKEKG 459
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 67/160 (41%), Gaps = 2/160 (1%)
Query: 83 KRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--Y 140
K+ A +V E MS G V + + LD + K ++ A F+++ D + Y
Sbjct: 303 KKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSY 362
Query: 141 GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKE 200
+LN + V ++ L +M E + +N +M G+ ++ D+L M
Sbjct: 363 SVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTC 422
Query: 201 NGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHIS 240
+G PD +Y +N + + + Q M+ + +S
Sbjct: 423 SGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLS 462
>gi|326532582|dbj|BAK05220.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 697
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 127/271 (46%), Gaps = 11/271 (4%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+Y ++N Y + ++E+ L +MKE G + + YN +M Y+ Q E + +LL+M
Sbjct: 380 IYNTIMNVYCKCSQIEEAEGLFAEMKEKGLKPTKVTYNILMDAYSRRLQPEVVESLLLEM 439
Query: 199 KENGVPPDNFSYRICINSYGARSELS-SMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
+ G P+ SY I++YG + ++S E+ M+ + I +Y+++ Y ++G
Sbjct: 440 HDLGFQPNARSYNCLISAYGRQKKMSEKAEDAFLRMK-KGGIKATSSSYTSLICAYAVSG 498
Query: 258 LKEKA-IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGL---QKIKCKKQL 313
EKA I YL + + S + Y L+ + GN +++M+ W +K+ C +
Sbjct: 499 QYEKAHIAYLDMKREGLKPSLET--YTALLDIFRRAGNTEKLMETWKSMTDEKVGCTRV- 555
Query: 314 NRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
+ +L L K G +A ++ E+ NI++ Y++ G K +LK
Sbjct: 556 --TFHMVLDGLAKHGLFVQARDVICEFGKIGLPPTAMTYNILMNAYAKGGQHYKLPQLLK 613
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
E+ P ++S + YA + +AF
Sbjct: 614 EMSTLELKPDSVTYSTLIYAYARVRDFSRAF 644
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 122/282 (43%), Gaps = 27/282 (9%)
Query: 141 GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKE 200
+L+ + EG+ E+L +M++ G + YN IM +Y Q E+ + +MKE
Sbjct: 347 ASLIKIFCDEGMKKEALIFQSEMEKRGIPSNTSIYNTIMNVYCKCSQIEEAEGLFAEMKE 406
Query: 201 NGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKE 260
G+ P +Y I +++Y R + +E++L EM D G +Y +
Sbjct: 407 KGLKPTKVTYNILMDAYSRRLQPEVVESLLLEMH-------DLGFQPNARSYNCLISAYG 459
Query: 261 KAIIYLKKCEDIVSKSK------DALGYNHLISHYASLGNKDEM-MKFWGLQKIKCKKQL 313
+ +K ED + K + Y LI YA G ++ + + +++ K L
Sbjct: 460 RQKKMSEKAEDAFLRMKKGGIKATSSSYTSLICAYAVSGQYEKAHIAYLDMKREGLKPSL 519
Query: 314 NRDYITMLGSLVKIGELEEAEKMLEEW------ELSCYCYDFRVPNIILLGYSQKGMIEK 367
Y +L + G EK++E W ++ C F +++L G ++ G+ +
Sbjct: 520 E-TYTALLDIFRRAG---NTEKLMETWKSMTDEKVGCTRVTF---HMVLDGLAKHGLFVQ 572
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
A V+ E K G PT +++I+ YA K + +KE
Sbjct: 573 ARDVICEFGKIGLPPTAMTYNILMNAYAKGGQHYKLPQLLKE 614
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 110/258 (42%), Gaps = 6/258 (2%)
Query: 149 REGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNF 208
R + DE L ++ + F A+ YN M G+++ + M++N V PD+
Sbjct: 249 RARMADEILEILGSLPPERGFREAVLYNAAMSGVAYCGRYDDAWKIFESMEKNNVQPDHV 308
Query: 209 SYRICINSYGARSELSSMENVLQEMESQSHISMDW--GTYSTVANYYIIAGLKEKAIIYL 266
+ I + R +S ++ + + + + W G +++ + G+K++A+I+
Sbjct: 309 TSSIMLLVMKRRK--ASAKDSWKFFQRMNRKGVKWSLGVSASLIKIFCDEGMKKEALIFQ 366
Query: 267 KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVK 326
+ E S ++ YN +++ Y +E + K K K Y ++ + +
Sbjct: 367 SEMEKRGIPSNTSI-YNTIMNVYCKCSQIEEAEGLFAEMKEKGLKPTKVTYNILMDAYSR 425
Query: 327 IGELEEAEKMLEEWELSCYCYDFRVPNIILLGYS-QKGMIEKADAVLKEIVKKGKTPTPN 385
+ E E +L E + + R N ++ Y QK M EKA+ + K G T +
Sbjct: 426 RLQPEVVESLLLEMHDLGFQPNARSYNCLISAYGRQKKMSEKAEDAFLRMKKGGIKATSS 485
Query: 386 SWSIIAAGYADKNNMEKA 403
S++ + YA EKA
Sbjct: 486 SYTSLICAYAVSGQYEKA 503
>gi|4454476|gb|AAD20923.1| hypothetical protein [Arabidopsis thaliana]
Length = 424
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 141/347 (40%), Gaps = 71/347 (20%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
+ L RI + D VS+TP+L +W G + +L+ +I L RF HALQVS+WM
Sbjct: 37 DTLKRRIQRVQDSSVSITPLLREWCQRGNQTGLSKLRSIITSLHRSNRFSHALQVSDWMI 96
Query: 97 GQ-GLAFSVHDHAVQLDLIGKVRGLESAETYFNSL--NDEDKVDKLYGALLNCYVREGLV 153
Q S D +L L KV G+E A +F ++ D D V KL G +
Sbjct: 97 EQKAYKLSSMDFERRLFLAAKVGGVEEAAKFFETVPAEDHDMVVKLLGEM---------- 146
Query: 154 DESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRIC 213
DE +KM+ G +C LL ++S
Sbjct: 147 DE-----KKMQPQG-----------LCFVK-----------LL---------TSYSMASV 170
Query: 214 INSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIV 273
++ G LS E ++Q+ W T+ YI AG EK + L++ E V
Sbjct: 171 VDVQGVEKFLSKWEVMIQD---------KWTTFYFPGLVYIRAGFMEKGLALLRRSETFV 221
Query: 274 SKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEA 333
+ Y L++ Y + +++ + W L K + ++ + K G+L
Sbjct: 222 DDGCREIIYGCLMTVYCNENLTEDVYRLWNLAKDYGISFDSSRCSDIVKAFTKKGDL--- 278
Query: 334 EKMLEEWELSCYCYDFRVPNIILL--GYSQKGMIEKADAVLKEIVKK 378
+ ++EEW PN+ L+ G + + E+A+ V+ + KK
Sbjct: 279 DGVMEEWN--------ECPNLDLMDFGLQHRCVKEEAEKVVDMLGKK 317
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 141/335 (42%), Gaps = 43/335 (12%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLN--- 131
+IR L R R AL V + M +G + SV +++ LD K G A + +
Sbjct: 168 LIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKG 227
Query: 132 -DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEK 190
+ D V Y L+N EG VDE+L+++ + G A+ Y ++ + + ++
Sbjct: 228 CEPDIVT--YNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKE 285
Query: 191 IPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVA 250
+ ++ +M N PD ++ + S + + V+ M I D TYS+
Sbjct: 286 VEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIP-DIVTYSS-- 342
Query: 251 NYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCK 310
I+ GL + V + DA+ L+S S G K + +
Sbjct: 343 ---ILDGLCD------------VGRVDDAV---ELLSRLKSYGCKPDTIA---------- 374
Query: 311 KQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADA 370
Y T+L L I + E AE+++ E S D N ++ QKG++++A
Sbjct: 375 ------YTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIK 428
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
V++++ + G P +++ I G ++ ++ A E
Sbjct: 429 VVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAME 463
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 119/306 (38%), Gaps = 53/306 (17%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGI---MC----------LYTNTG 186
+ ++ ++GLVD ++ ++++M E G + YN I +C L +N
Sbjct: 410 FNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQ 469
Query: 187 QHEKIPDV----------------------LLDMKENGVPPDNFSYRICINSYGARSELS 224
+ PD+ +++M + PPD ++ I S + L
Sbjct: 470 SYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLL 529
Query: 225 SMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNH 284
L+ M I + TY+ V + + AG ++A LK + + + D + YN
Sbjct: 530 QAIETLKIMAENGCIP-NQSTYNIVVDALLKAGKTQEA---LKLLSGMTNGTPDLITYNT 585
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT---MLGSLVKIGELEEAEKMLEEWE 341
+IS+ G +E + L ++ L+ D IT + + + + A +ML +
Sbjct: 586 VISNITKAGKMEEALD---LLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQ 642
Query: 342 LSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNME 401
D N ILLG+ Q + A +V G P +++ I+
Sbjct: 643 DMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEAL------- 695
Query: 402 KAFECM 407
A+EC+
Sbjct: 696 -AYECL 700
>gi|297733647|emb|CBI14894.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 118/268 (44%), Gaps = 5/268 (1%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+Y L++ Y + V+E+ L +MK G ++ YN +M Y+ Q E I ++LL+M
Sbjct: 350 VYNTLMDAYSKSNRVEEAEGLFGEMKAKGVMPTSATYNILMDAYSRRMQPEIIENLLLEM 409
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
++ G+ P+ SY I++YG + ++S M + I +Y+ + + Y + G
Sbjct: 410 QDMGLEPNVKSYTCLISAYGRQKKMSDMAADAFLRMKKVGIKPTSHSYTALIHAYSVGGW 469
Query: 259 KEKAIIYLK--KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
EKA + K E I + Y L+ + G+ +MK W L +
Sbjct: 470 HEKAYTAFENMKREGIKPSIET---YTALLDAFRRAGDTQTLMKIWKLMLSDKIEGTRVT 526
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
+ +L K G EA ++ E+ + N+++ Y++ G + +LKE+
Sbjct: 527 FNILLDGFAKQGHYMEARDVIFEFGKIGFQPTVMTYNMLMNAYARGGQHSRLPQLLKEMT 586
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAF 404
P ++S + Y + ++AF
Sbjct: 587 SLNLKPDSITYSTMIYAYVRVRDFKRAF 614
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 141/285 (49%), Gaps = 17/285 (5%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
++ GAL+ + EGL +E+L + +M++ G +A+ YN +M Y+ + + E+ + +
Sbjct: 314 EVLGALIKSFCDEGLKNEALIIQSEMEKKGISSNAIVYNTLMDAYSKSNRVEEAEGLFGE 373
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYY---- 253
MK GV P + +Y I +++Y R + +EN+L EM+ + + +Y+ + + Y
Sbjct: 374 MKAKGVMPTSATYNILMDAYSRRMQPEIIENLLLEMQDMG-LEPNVKSYTCLISAYGRQK 432
Query: 254 IIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLG-NKDEMMKFWGLQKIKCKKQ 312
++ + A + +KK V + Y LI Y+ G ++ F +++ K
Sbjct: 433 KMSDMAADAFLRMKK----VGIKPTSHSYTALIHAYSVGGWHEKAYTAFENMKREGIKPS 488
Query: 313 LNRDYITMLGSLVKIGELEEAEKMLEEWE--LSCYCYDFRVP-NIILLGYSQKGMIEKAD 369
+ Y +L + + G + + +++ W+ LS RV NI+L G++++G +A
Sbjct: 489 IE-TYTALLDAFRRAG---DTQTLMKIWKLMLSDKIEGTRVTFNILLDGFAKQGHYMEAR 544
Query: 370 AVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVH 414
V+ E K G PT +++++ YA + + +KE +++
Sbjct: 545 DVIFEFGKIGFQPTVMTYNMLMNAYARGGQHSRLPQLLKEMTSLN 589
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 24/224 (10%)
Query: 17 TKTNLEIFTRAY-RAVKPVARNNLYSRISPLG-DPDVSLTPVLDQWVLEGQKISELELQR 74
T I AY R ++P NL + +G +P+V L +K+S++
Sbjct: 382 TSATYNILMDAYSRRMQPEIIENLLLEMQDMGLEPNVKSYTCLISAYGRQKKMSDMAADA 441
Query: 75 VIRQLR--------SRKRFKHALQVSEW----------MSGQGLAFSVHDHAVQLDLIGK 116
+R + S HA V W M +G+ S+ + LD +
Sbjct: 442 FLRMKKVGIKPTSHSYTALIHAYSVGGWHEKAYTAFENMKREGIKPSIETYTALLDAFRR 501
Query: 117 VRGLESAETYFNSLNDEDKVDKL---YGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
++ + L DK++ + LL+ + ++G E+ ++ + ++G + +
Sbjct: 502 AGDTQTLMKIWK-LMLSDKIEGTRVTFNILLDGFAKQGHYMEARDVIFEFGKIGFQPTVM 560
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSY 217
YN +M Y GQH ++P +L +M + PD+ +Y I +Y
Sbjct: 561 TYNMLMNAYARGGQHSRLPQLLKEMTSLNLKPDSITYSTMIYAY 604
Score = 45.1 bits (105), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 112/266 (42%), Gaps = 9/266 (3%)
Query: 149 REGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNF 208
R G+ D+ + L++ + + F YN + ++ G+++ V +M+ N + PD+
Sbjct: 219 RAGMGDDLMVLLRNLPKTRQFRDVRIYNSAISGLSSCGRYDDAWKVYDEMETNNIRPDHV 278
Query: 209 SYRICINSYGARSELSSMENVLQEMESQSHISMDWG--TYSTVANYYIIAGLKEKAIIYL 266
+ I I R + S ++ + + + + W + + GLK +A+I
Sbjct: 279 TCSIMITV--MRKDGHSAKDAWEFFQRMNRKGVKWSLEVLGALIKSFCDEGLKNEALIIQ 336
Query: 267 KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVK 326
+ E S +A+ YN L+ Y+ +E +G K K + Y ++ + +
Sbjct: 337 SEMEK-KGISSNAIVYNTLMDAYSKSNRVEEAEGLFGEMKAKGVMPTSATYNILMDAYSR 395
Query: 327 IGELEEAEKMLEEWELSCYCYDFRVPNIILLGYS-QKGMIEKADAVLKEIVKKGKTPTPN 385
+ E E +L E + + + ++ Y QK M + A + K G PT +
Sbjct: 396 RMQPEIIENLLLEMQDMGLEPNVKSYTCLISAYGRQKKMSDMAADAFLRMKKVGIKPTSH 455
Query: 386 SWSIIAAGYADKNNMEK---AFECMK 408
S++ + Y+ EK AFE MK
Sbjct: 456 SYTALIHAYSVGGWHEKAYTAFENMK 481
>gi|225456802|ref|XP_002275673.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic [Vitis vinifera]
gi|147821419|emb|CAN76897.1| hypothetical protein VITISV_010606 [Vitis vinifera]
Length = 692
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 118/268 (44%), Gaps = 5/268 (1%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+Y L++ Y + V+E+ L +MK G ++ YN +M Y+ Q E I ++LL+M
Sbjct: 350 VYNTLMDAYSKSNRVEEAEGLFGEMKAKGVMPTSATYNILMDAYSRRMQPEIIENLLLEM 409
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
++ G+ P+ SY I++YG + ++S M + I +Y+ + + Y + G
Sbjct: 410 QDMGLEPNVKSYTCLISAYGRQKKMSDMAADAFLRMKKVGIKPTSHSYTALIHAYSVGGW 469
Query: 259 KEKAIIYLK--KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
EKA + K E I + Y L+ + G+ +MK W L +
Sbjct: 470 HEKAYTAFENMKREGIKPSIET---YTALLDAFRRAGDTQTLMKIWKLMLSDKIEGTRVT 526
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
+ +L K G EA ++ E+ + N+++ Y++ G + +LKE+
Sbjct: 527 FNILLDGFAKQGHYMEARDVIFEFGKIGFQPTVMTYNMLMNAYARGGQHSRLPQLLKEMT 586
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAF 404
P ++S + Y + ++AF
Sbjct: 587 SLNLKPDSITYSTMIYAYVRVRDFKRAF 614
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 141/285 (49%), Gaps = 17/285 (5%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
++ GAL+ + EGL +E+L + +M++ G +A+ YN +M Y+ + + E+ + +
Sbjct: 314 EVLGALIKSFCDEGLKNEALIIQSEMEKKGISSNAIVYNTLMDAYSKSNRVEEAEGLFGE 373
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYY---- 253
MK GV P + +Y I +++Y R + +EN+L EM+ + + +Y+ + + Y
Sbjct: 374 MKAKGVMPTSATYNILMDAYSRRMQPEIIENLLLEMQDMG-LEPNVKSYTCLISAYGRQK 432
Query: 254 IIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLG-NKDEMMKFWGLQKIKCKKQ 312
++ + A + +KK V + Y LI Y+ G ++ F +++ K
Sbjct: 433 KMSDMAADAFLRMKK----VGIKPTSHSYTALIHAYSVGGWHEKAYTAFENMKREGIKPS 488
Query: 313 LNRDYITMLGSLVKIGELEEAEKMLEEWE--LSCYCYDFRVP-NIILLGYSQKGMIEKAD 369
+ Y +L + + G + + +++ W+ LS RV NI+L G++++G +A
Sbjct: 489 IE-TYTALLDAFRRAG---DTQTLMKIWKLMLSDKIEGTRVTFNILLDGFAKQGHYMEAR 544
Query: 370 AVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVH 414
V+ E K G PT +++++ YA + + +KE +++
Sbjct: 545 DVIFEFGKIGFQPTVMTYNMLMNAYARGGQHSRLPQLLKEMTSLN 589
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 24/224 (10%)
Query: 17 TKTNLEIFTRAY-RAVKPVARNNLYSRISPLG-DPDVSLTPVLDQWVLEGQKISELELQR 74
T I AY R ++P NL + +G +P+V L +K+S++
Sbjct: 382 TSATYNILMDAYSRRMQPEIIENLLLEMQDMGLEPNVKSYTCLISAYGRQKKMSDMAADA 441
Query: 75 VIRQLR--------SRKRFKHALQVSEW----------MSGQGLAFSVHDHAVQLDLIGK 116
+R + S HA V W M +G+ S+ + LD +
Sbjct: 442 FLRMKKVGIKPTSHSYTALIHAYSVGGWHEKAYTAFENMKREGIKPSIETYTALLDAFRR 501
Query: 117 VRGLESAETYFNSLNDEDKVDKL---YGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
++ + L DK++ + LL+ + ++G E+ ++ + ++G + +
Sbjct: 502 AGDTQTLMKIWK-LMLSDKIEGTRVTFNILLDGFAKQGHYMEARDVIFEFGKIGFQPTVM 560
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSY 217
YN +M Y GQH ++P +L +M + PD+ +Y I +Y
Sbjct: 561 TYNMLMNAYARGGQHSRLPQLLKEMTSLNLKPDSITYSTMIYAY 604
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 112/266 (42%), Gaps = 9/266 (3%)
Query: 149 REGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNF 208
R G+ D+ + L++ + + F YN + ++ G+++ V +M+ N + PD+
Sbjct: 219 RAGMGDDLMVLLRNLPKTRQFRDVRIYNSAISGLSSCGRYDDAWKVYDEMETNNIRPDHV 278
Query: 209 SYRICINSYGARSELSSMENVLQEMESQSHISMDWG--TYSTVANYYIIAGLKEKAIIYL 266
+ I I R + S ++ + + + + W + + GLK +A+I
Sbjct: 279 TCSIMITV--MRKDGHSAKDAWEFFQRMNRKGVKWSLEVLGALIKSFCDEGLKNEALIIQ 336
Query: 267 KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVK 326
+ E S +A+ YN L+ Y+ +E +G K K + Y ++ + +
Sbjct: 337 SEMEK-KGISSNAIVYNTLMDAYSKSNRVEEAEGLFGEMKAKGVMPTSATYNILMDAYSR 395
Query: 327 IGELEEAEKMLEEWELSCYCYDFRVPNIILLGYS-QKGMIEKADAVLKEIVKKGKTPTPN 385
+ E E +L E + + + ++ Y QK M + A + K G PT +
Sbjct: 396 RMQPEIIENLLLEMQDMGLEPNVKSYTCLISAYGRQKKMSDMAADAFLRMKKVGIKPTSH 455
Query: 386 SWSIIAAGYADKNNMEK---AFECMK 408
S++ + Y+ EK AFE MK
Sbjct: 456 SYTALIHAYSVGGWHEKAYTAFENMK 481
>gi|255660928|gb|ACU25633.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 481
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 92/421 (21%), Positives = 180/421 (42%), Gaps = 29/421 (6%)
Query: 79 LRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAETYFNSLN------ 131
L K +HALQ W+ L + H ++++G+ L A +
Sbjct: 19 LHGAKNAEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEW 78
Query: 132 DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
DED ++ +++ Y +EG+V ES+ L QKM+E+G + +Y+ + + + G++
Sbjct: 79 DED----MWVLMIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVISRRGRYMMS 134
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
M G+ P ++ + I + ++ + ++++S+ I+ D TY+T+ N
Sbjct: 135 KRYFNKMVNEGIEPTRHTFNVLIWGFFLSGKVETANRFFEDLKSR-EITPDVVTYNTMIN 193
Query: 252 YYI-IAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCK 310
Y + ++E +L+ E + + + Y LI YAS+ D+ ++ K
Sbjct: 194 GYTRVKKMEEAEKYFLEMKEKKIDPT--VVTYTTLIKGYASIDRVDDALRLVEEMKGLGI 251
Query: 311 KQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQ--KGMIEKA 368
K Y T+L L ++ EA +L+E + Y I L SQ G ++ A
Sbjct: 252 KPNAITYSTLLPGLCDAEKMSEARSLLKEM-VDKYIAPKDNSIFIRLISSQCKAGNLDAA 310
Query: 369 DAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPK----- 423
VLK +++ + ++ Y ++A + + + E++ RP+
Sbjct: 311 ADVLKAMIRLSIPTEAGHYGVLIENYCKAGKYDQAVKLFDKLI---EKDIILRPQSTLHM 367
Query: 424 -PSLVSSILDWLGDNRDVEEVEAFVSSL-KIKVQKRNMYHALTEAHIRSGQEVDGLLESM 481
PS + ++++L +N + E V L K+ VQ + L H + G D E +
Sbjct: 368 EPSAYNPLIEYLCNNGQTGKAETLVRQLMKLGVQDSISLNTLIRGHSQEGSP-DSAFEIL 426
Query: 482 K 482
K
Sbjct: 427 K 427
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 82/388 (21%), Positives = 167/388 (43%), Gaps = 30/388 (7%)
Query: 65 QKISELELQRVIRQ-------LRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQL---DLI 114
QK+ EL ++R I+ + R R+ + + M +G+ + H V + L
Sbjct: 104 QKMEELGVERTIKSYDALFKVISRRGRYMMSKRYFNKMVNEGIEPTRHTFNVLIWGFFLS 163
Query: 115 GKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
GKV E+A +F L + + Y ++N Y R ++E+ +MKE +
Sbjct: 164 GKV---ETANRFFEDLKSREITPDVVTYNTMINGYTRVKKMEEAEKYFLEMKEKKIDPTV 220
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQE 232
+ Y ++ Y + + + ++ +MK G+ P+ +Y + ++S ++L+E
Sbjct: 221 VTYTTLIKGYASIDRVDDALRLVEEMKGLGIKPNAITYSTLLPGLCDAEKMSEARSLLKE 280
Query: 233 MESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASL 292
M + D + + + AG + A LK + S +A Y LI +Y
Sbjct: 281 MVDKYIAPKDNSIFIRLISSQCKAGNLDAAADVLKAMIRL-SIPTEAGHYGVLIENYCKA 339
Query: 293 GNKDEMMKFWG--LQK---IKCKKQLNRD---YITMLGSLVKIGELEEAEKMLEEWELSC 344
G D+ +K + ++K ++ + L+ + Y ++ L G+ +AE ++ + +
Sbjct: 340 GKYDQAVKLFDKLIEKDIILRPQSTLHMEPSAYNPLIEYLCNNGQTGKAETLVRQL-MKL 398
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
D N ++ G+SQ+G + A +LK ++++ +++ + Y +N A
Sbjct: 399 GVQDSISLNTLIRGHSQEGSPDSAFEILKIMLRRKVDSEKSAYDSLVQSYLKRNEPADA- 457
Query: 405 ECMKEALAVHEENKFWRPKPSLVSSILD 432
K AL EN P SL S+++
Sbjct: 458 ---KAALDXMIENDHL-PDSSLFRSVME 481
>gi|255660922|gb|ACU25630.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 484
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 93/432 (21%), Positives = 185/432 (42%), Gaps = 32/432 (7%)
Query: 79 LRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAETYFNSLN------ 131
L K +HALQ W+ L + H ++++G+ L A +
Sbjct: 19 LHGAKNAEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEW 78
Query: 132 DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
D D ++ +++ Y + G+V ES+ L QKM+E+G + +Y+ + + G++
Sbjct: 79 DXD----MWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRYMMA 134
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
M G+ P ++ + I + ++ + ++M+S+ IS D TY+T+ N
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR-EISPDVITYNTMIN 193
Query: 252 -YYIIAGLKEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
YY + ++E +++ K ++I + + Y LI Y S+ D+ ++ K
Sbjct: 194 GYYRVKKMEEAEKYFVEMKGKNI---EPNVVTYTTLIKGYVSVDQVDDALRLVEEMKGYG 250
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYC--YDFRVPNIILLGYSQKGMIEK 367
K Y T+L L ++ EA +L+E L Y D + ++ + G ++
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARSILKEM-LDKYIAPTDNSIFMRLISSQCKAGNLDA 309
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPK---- 423
A VLK +++ + ++ Y ++A + + + + E++ RP+
Sbjct: 310 AADVLKAMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLI---EKDIILRPQSTLH 366
Query: 424 --PSLVSSILDWLGDNRDVEEVEAFVSS-LKIKVQKRNMYHALTEAHIRSGQEVDG--LL 478
PS + ++++L +N + E V LK+ VQ + L H R G LL
Sbjct: 367 MEPSAYNXMIEYLCNNGQXAKAETLVRQLLKLGVQDPTALNTLIRGHSREGSPDSAFELL 426
Query: 479 ESMKADDIDEDK 490
+ M +D +K
Sbjct: 427 KIMLRRKVDSEK 438
>gi|255660900|gb|ACU25619.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 481
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 93/432 (21%), Positives = 182/432 (42%), Gaps = 32/432 (7%)
Query: 79 LRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAETYFNSLN------ 131
L S K +HALQ W+ L + H ++++G+ L A +
Sbjct: 19 LHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEW 78
Query: 132 DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
DED ++ +++ Y +ZG+V ES+ + QKM+E+G + +YN + + G++
Sbjct: 79 DED----MWVMMIDSYGKZGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMA 134
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
M G+ P ++ + I + ++ + ++M+S+ IS D TY+T N
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR-EISPDVVTYNTXIN 193
Query: 252 -YYIIAGLKEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
YY + ++E +++ K +I + Y LI Y S+ D ++ K
Sbjct: 194 GYYRVKKMEEAEKYFVEMKGRNI---EPTVVTYTTLIKGYVSVDQVDXALRLVEEMKGFG 250
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYC--YDFRVPNIILLGYSQKGMIEK 367
K Y T+L L ++ EA +L+E + Y D + ++ + G ++
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARVILKEM-MDKYLAPTDNSIFMRLISSHCXSGNLDA 309
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPK---- 423
A VLK + + + ++ + +KA + + + + E++ RP+
Sbjct: 310 AADVLKAMXRLSVPTEAGHYGVLIENFCKXGQYDKAVKLLDKLI---EKDIILRPQSTLH 366
Query: 424 --PSLVSSILDWLGDNRDVEEVEAFVSSL-KIKVQKRNMYHALTEAHIRSGQEVDG--LL 478
PS + +++L +N + E V L K+ VQ + L H + G LL
Sbjct: 367 LEPSAYNPXIEYLCNNGQAXKAETLVRQLMKLGVQDPTALNTLIRGHSQEGSPDSAFELL 426
Query: 479 ESMKADDIDEDK 490
+ M +D +K
Sbjct: 427 KIMLRRKVDSEK 438
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 138/328 (42%), Gaps = 54/328 (16%)
Query: 116 KVRGLESAETYFNSL---NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
+V+ +E AE YF + N E V Y L+ YV VD +L L+++MK G +A
Sbjct: 197 RVKKMEEAEKYFVEMKGRNIEPTV-VTYTTLIKGYVSVDQVDXALRLVEEMKGFGIKPNA 255
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP-DNFSYRICINSYGARSELSSMENVLQ 231
+ Y+ ++ N + + +L +M + + P DN + I+S+ L + +VL+
Sbjct: 256 ITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCXSGNLDAAADVLK 315
Query: 232 EMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC--EDIVSKSKDAL-----GYNH 284
M S + + G Y + + G +KA+ L K +DI+ + + L YN
Sbjct: 316 AMXRLS-VPTEAGHYGVLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNP 374
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSC 344
I + + G Q K + T++ L+K+G
Sbjct: 375 XIEYLCNNG-----------QAXKAE--------TLVRQLMKLG---------------- 399
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
D N ++ G+SQ+G + A +LK ++++ ++++ + Y KN A
Sbjct: 400 -VQDPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDA- 457
Query: 405 ECMKEALAVHEENKFWRPKPSLVSSILD 432
K AL EN P SL S+++
Sbjct: 458 ---KAALDSMIENDHL-PDSSLFRSVME 481
>gi|297746078|emb|CBI16134.3| unnamed protein product [Vitis vinifera]
Length = 453
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 168/386 (43%), Gaps = 48/386 (12%)
Query: 45 PLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSV 104
P G+P V L W+ EG I + I +LR K K AL+V EW+ +
Sbjct: 68 PRGEP-VGLA--FQSWMGEGCPIHRGHIFHAINRLRKLKFNKRALEVMEWVVRERPYRPK 124
Query: 105 H-DHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKM 163
D++ L+ K+ G+ E F+ + E + + LY L+ + +G++ SL+ M+KM
Sbjct: 125 ELDYSYLLEFTTKLHGISQGEKLFSHVPLEFQNELLYNNLVIACLDKGVIRLSLAYMKKM 184
Query: 164 KEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSEL 223
+E+G S L +N ++ L+++ + + IP +L MK + V +Y I + +
Sbjct: 185 RELGHPISYLVFNRLIILHSSPHRRKIIPRILTQMKADKVARHVSTYNILMKIEANEHNI 244
Query: 224 SSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYN 283
+ V EM+ Q + + +Y +A + +A L A Y++ E ++ + + +
Sbjct: 245 EGLVKVFGEMK-QQQVEPNEVSYCLLATAHAVAKLYTVAEAYVEAVEKSITGNNWS-TLD 302
Query: 284 HLISHYASLGNKDEMMKFWGLQKIKCKKQLNR---------------------------- 315
LI Y LG ++ K+K + ++NR
Sbjct: 303 VLIILYGYLGKPTDLEPLVR-NKVKKRVEINRAIQFNDICLFQTWEALKTLELGKGLTIS 361
Query: 316 -------DYITMLGSLVKI----GELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGM 364
++ S+V+I G++E AEK+ EE + + Y V N ++ Y + +
Sbjct: 362 TRIRKSIPWLETTLSIVEIFSENGDVENAEKLFEELKTANYTRYTFVYNTLIKAYVKAKV 421
Query: 365 IEKADAVLKEIVKKGKTPTPNSWSII 390
+ +L+ ++ G P ++S++
Sbjct: 422 YD--PNLLRRMILGGARPDAETYSLM 445
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 156/335 (46%), Gaps = 21/335 (6%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
YG+ ++ +EG ++E+ +++KMKE+G +A+ YN ++ Y N G E D M
Sbjct: 264 YGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMV 323
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G+ P +Y + I++ ++ + +++EM S+ + D TY+ + N Y G
Sbjct: 324 REGLMPTVSTYNMLIHALFLDCKMDEADGIIKEM-SEKGLVPDSVTYNILINGYCRCGNV 382
Query: 260 EKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
+KA ++++SK + Y LI + G + + +KI +K + D
Sbjct: 383 KKAFTLH---DEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLF--EKI-VRKGIFPDL 436
Query: 318 ITMLGSLV----KIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
I M +L+ G ++ A ML+E + D N ++ G ++G +E A +++
Sbjct: 437 I-MFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIE 495
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDW 433
E+ +G P S++ + +GY+ + +M+ AF E L++ + P ++++
Sbjct: 496 EMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIG-----FNPTLLTYNALIQG 550
Query: 434 LGDNRDVEEVEAFVSSLKIK--VQKRNMYHALTEA 466
L N + + E + + K N Y +L E
Sbjct: 551 LCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEG 585
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 154/343 (44%), Gaps = 16/343 (4%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+IR KR A + + M G+G+ VH L L K E A + +
Sbjct: 127 LIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMR 186
Query: 135 KVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+ + ++N +EG + ++ + M+ +G + + YN I+ Y + G+ E
Sbjct: 187 IKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGAR 246
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
+ MK GV PD+++Y I+ +L +L++M+ + + TY+T+ +
Sbjct: 247 MIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMK-EIGLRPTAVTYNTLIDG 305
Query: 253 YIIAGLKEKAIIYLKKC--EDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCK 310
Y G E A Y K E ++ YN LI H L K M + G+ K +
Sbjct: 306 YCNKGNLEMAFDYRDKMVREGLMPTVST---YNMLI-HALFLDCK--MDEADGIIKEMSE 359
Query: 311 KQLNRDYIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL-GYSQKGMIE 366
K L D +T ++ + G +++A + +E +S RV L+ S++G ++
Sbjct: 360 KGLVPDSVTYNILINGYCRCGNVKKAFTLHDEM-ISKGIQPTRVTYTSLIYVLSKRGRMK 418
Query: 367 KADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
+AD + ++IV+KG P ++ + G+ NM++AF +KE
Sbjct: 419 QADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKE 461
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 50/97 (51%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
++ AL++ + G +D + +++++M +M + +N +M G+ E +++ +M
Sbjct: 438 MFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEM 497
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMES 235
K G+ PD+ SY I+ Y R ++ V EM S
Sbjct: 498 KSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLS 534
>gi|422294672|gb|EKU21972.1| putative udp-glucosyltransferase, partial [Nannochloropsis gaditana
CCMP526]
Length = 535
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 121/273 (44%), Gaps = 17/273 (6%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFG------------SALNYNGIMCLYTNTGQ 187
Y L++ Y G + + +++++M E G G + + Y +M Y G
Sbjct: 245 YTTLMHAYAGRGDTEGAEAVLRRMLE-GEGGRVREEEVLRVLPNVMTYTTLMTAYAAGGD 303
Query: 188 HEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYS 247
E VL M+E + P+ +Y + + +Y R ++ E VL+ M S ++++ + TY+
Sbjct: 304 VEGSEAVLERMEEACIAPNVMTYTVLMTAYTLRGDVKGAEGVLRRMIS-AYVAPNANTYT 362
Query: 248 TVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKI 307
T+ + Y + G A L + E AL + L++ YA+ G + +
Sbjct: 363 TLLHAYTVNGNAAGAEEVLARME-AAGVLPTALTFATLMTVYAARGEVESAKGVLARMEA 421
Query: 308 KCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVP-NIILLGYSQKGMIE 366
+ T+L + V G++ AE++L E Y DF + N ++ GY+ KG +
Sbjct: 422 AGVGPTAMAFDTLLNAYVVAGDVGGAEQVLRRREAEAYP-DFPLTYNTLMNGYADKGDVA 480
Query: 367 KADAVLKEIVKKGKTPTPNSWSIIAAGYADKNN 399
A+ VL + KG P + S + YA+ +
Sbjct: 481 GAEGVLARMRAKGVGPDETTLSTLLHAYAEAGD 513
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 161/354 (45%), Gaps = 28/354 (7%)
Query: 111 LDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGS 168
+D K +E+A F+ +N + + L++ + G ++ ++ +M+ G
Sbjct: 423 IDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGL 482
Query: 169 FGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMEN 228
G+A+ Y ++ + N EK ++ +M E G PD Y I+ +L
Sbjct: 483 KGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASF 542
Query: 229 VLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISH 288
VL +M+ ++ S D +++ + N + ++A LK+ E+ K D + YN LISH
Sbjct: 543 VLSKMK-EAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKP-DGVTYNTLISH 600
Query: 289 YASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKI----GELEEAEKMLEEWELSC 344
++ G+ + L K K+ L +T G+L+ G L+EA K+ + +
Sbjct: 601 FSKTGDFSTAHR---LMKKMVKEGLVPTVVTY-GALIHAYCLNGNLDEAMKIFRDMSSTS 656
Query: 345 YCYDFRVP------NIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKN 398
+VP NI++ +K ++ A +++ ++ KG P N+++ + G +KN
Sbjct: 657 -----KVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKN 711
Query: 399 NMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKI 452
+ KAFE M + + H N P + + +WL + ++++FV ++
Sbjct: 712 WLSKAFELM-DRMTEHACN----PDYITMEILTEWLSAVGETAKLKSFVQGYEV 760
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 123/274 (44%), Gaps = 9/274 (3%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMG-SFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
Y L++ + G +E L L+++M+ + + YN ++ Y E ++ M
Sbjct: 383 YNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQM 442
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
++GVPP+ + ++ ++ EM+ + + + TY+ + +
Sbjct: 443 NKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKG-LKGNAVTYTALIRAFCNVNN 501
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
EKA+ + + S DA+ Y LIS + G D + L K+K + + D +
Sbjct: 502 IEKAMELFDEMLE-AGCSPDAIVYYTLISGLSQAGKLDRAS--FVLSKMK-EAGFSPDIV 557
Query: 319 T---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
+ ++ + +L+EA +ML+E E + D N ++ +S+ G A ++K++
Sbjct: 558 SFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKM 617
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
VK+G PT ++ + Y N+++A + ++
Sbjct: 618 VKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRD 651
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 121/263 (46%), Gaps = 18/263 (6%)
Query: 158 SLMQKMKEMG------SFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG--VPPDNFS 209
+L+ +MKEM +FG +N+ +C + + ++ + + + NG V PD +
Sbjct: 326 TLLAEMKEMDIQPNVVTFGILINH---LCKFRRVDEALEVFEKMNGGESNGFLVEPDVIT 382
Query: 210 YRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC 269
Y I+ +++ M SQ + TY+ + + Y A + E A ++
Sbjct: 383 YNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAA----REL 438
Query: 270 EDIVSK---SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVK 326
D ++K + + N L+ G + ++F+ + K K Y ++ +
Sbjct: 439 FDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCN 498
Query: 327 IGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNS 386
+ +E+A ++ +E + D V ++ G SQ G +++A VL ++ + G +P S
Sbjct: 499 VNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVS 558
Query: 387 WSIIAAGYADKNNMEKAFECMKE 409
++++ G+ KN +++A+E +KE
Sbjct: 559 FNVLINGFCRKNKLDEAYEMLKE 581
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 67/367 (18%), Positives = 142/367 (38%), Gaps = 63/367 (17%)
Query: 100 LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSL 159
+ SV+ + + G+ + ++ + +N L ++ + L++ R+G VD++L L
Sbjct: 155 IPLSVNAATLLIRCFGRAQMVDESFLVYNELCPSRRLTHIRNILIDVLFRKGRVDDALHL 214
Query: 160 MQKMKEMGS---------------------FGSALNYNGIMCLYTNTGQHEKIP------ 192
+ +M + + G A++ I+ L + +HE P
Sbjct: 215 LDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSIWLT 274
Query: 193 ----------------DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQ 236
DVL + + G + S + + G E M +L EM+ +
Sbjct: 275 QLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMK-E 333
Query: 237 SHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS----KDALGYNHLISHYASL 292
I + T+ + N+ ++A+ +K S D + YN LI +
Sbjct: 334 MDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKV 393
Query: 293 GNKDEMMKFWGLQKIKCKKQLNRDYIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDF 349
G ++E + +++++ + + + +T ++ K +E A ++ ++ D
Sbjct: 394 GRQEEGLGL--VERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMN-----KDG 446
Query: 350 RVPNIILL-----GYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
PN++ L G + G I A E+ KG +++ + + + NN+EKA
Sbjct: 447 VPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAM 506
Query: 405 ECMKEAL 411
E E L
Sbjct: 507 ELFDEML 513
>gi|356502612|ref|XP_003520112.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 697
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 162/360 (45%), Gaps = 47/360 (13%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVH-DHAVQLDLIGKVRGL----ESAETYFNS 129
I L S R + A +V E M + ++H DH ++ +R L + A +F
Sbjct: 255 TISGLLSSGRSEDAWKVYESMETE----NIHPDHMTCSIMVTVMRELGHSAKDAWQFFEK 310
Query: 130 LNDEDK--VDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQ 187
+N + +++ GAL+N + EGL ++L + +M++ G SA+ YN +M + +
Sbjct: 311 MNRKGVRWSEEVLGALINSFCVEGLRRQALIIQSEMEKKGVSSSAIVYNTLMDAFCKSNH 370
Query: 188 HEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYS 247
E + ++MK G+ P +Y I +++Y R + +E +L+EM+ D G
Sbjct: 371 IEAAEGLFVEMKAKGIKPIAATYNILMHAYSRRMQPKIVEKLLEEMQ-------DVGLKP 423
Query: 248 TVANY--YIIAGLKEK---------AIIYLKKCEDIVSKSKDALGYNHLISHYASLG-NK 295
+Y IIA K+K A + +KK V + Y LI Y+ G ++
Sbjct: 424 NATSYTCLIIAYGKQKNMSDMAAADAFLKMKK----VGVKPTSQSYTALIHAYSVSGLHE 479
Query: 296 DEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSC------YCYDF 349
F +Q K + Y T+L + G +A+ ++E W+L F
Sbjct: 480 KAYAAFENMQNEGIKPSI-ETYTTLLNAFRHAG---DAQTLMEIWKLMISEKVEGTGATF 535
Query: 350 RVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
NI++ G++++G+ +A V+ E K G PT +++++ YA K + +KE
Sbjct: 536 ---NILVDGFAKQGLFMEAREVISEFGKVGLKPTVVTYNMLINAYARGGQHSKLPQLLKE 592
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 129/311 (41%), Gaps = 17/311 (5%)
Query: 151 GLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSY 210
G+ DE + L + + F YN + ++G+ E V M+ + PD+ +
Sbjct: 228 GMGDEVMDLFRNLPSSNEFRDVHVYNATISGLLSSGRSEDAWKVYESMETENIHPDHMTC 287
Query: 211 RICINSYGARSELSSMENVLQEMESQSHISMDWG--TYSTVANYYIIAGLKEKAIIYLKK 268
I + R S ++ Q E + + W + N + + GL+ +A+I +
Sbjct: 288 SIMVTV--MRELGHSAKDAWQFFEKMNRKGVRWSEEVLGALINSFCVEGLRRQALIIQSE 345
Query: 269 CEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIG 328
E S A+ YN L+ + + + + K K K + Y ++ + +
Sbjct: 346 MEK-KGVSSSAIVYNTLMDAFCKSNHIEAAEGLFVEMKAKGIKPIAATYNILMHAYSRRM 404
Query: 329 ELEEAEKMLEEWELSCYCYDFRVPNIILLGYS-QKGM--IEKADAVLKEIVKKGKTPTPN 385
+ + EK+LEE + + +++ Y QK M + ADA LK + K G PT
Sbjct: 405 QPKIVEKLLEEMQDVGLKPNATSYTCLIIAYGKQKNMSDMAAADAFLK-MKKVGVKPTSQ 463
Query: 386 SWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWL---GDNRDVEE 442
S++ + Y+ EKA+ + +N+ +P +++L+ GD + + E
Sbjct: 464 SYTALIHAYSVSGLHEKAYAAFENM-----QNEGIKPSIETYTTLLNAFRHAGDAQTLME 518
Query: 443 VEAFVSSLKIK 453
+ + S K++
Sbjct: 519 IWKLMISEKVE 529
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 55/110 (50%), Gaps = 1/110 (0%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ L++ + ++GL E+ ++ + ++G + + YN ++ Y GQH K+P +L +M
Sbjct: 535 FNILVDGFAKQGLFMEAREVISEFGKVGLKPTVVTYNMLINAYARGGQHSKLPQLLKEMA 594
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTV 249
+ PD+ +Y I ++ + ++M + MD G+Y T+
Sbjct: 595 VLKLKPDSVTYSTMIFAFVRVRDFRRAFFYHKQMIKSGQM-MDGGSYQTL 643
>gi|225445998|ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
[Vitis vinifera]
gi|297735424|emb|CBI17864.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 135/313 (43%), Gaps = 16/313 (5%)
Query: 95 MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGL 152
M GL F + + G+ L+ A +F L E V Y +LL + + G+
Sbjct: 271 MRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGI 330
Query: 153 VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
E+LS++++M++ + YN ++ Y G HE+ D + M G+ P+ +Y
Sbjct: 331 YSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTT 390
Query: 213 CINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDI 272
IN+YG + + ++M+ G V Y I G+ K + + +
Sbjct: 391 VINAYGKAGKEDKALSFFRQMKES-------GCVPNVCTYNAILGMLGKKSRLEEMIDML 443
Query: 273 VSKSKDALGYNHLI--SHYASLGNKDEMMKFWG--LQKIK-CKKQLNRD-YITMLGSLVK 326
+ N + + A GNK M K+ +++K C + NRD + ++G+ +
Sbjct: 444 CDMRSNGCAPNSVTWNTMLAMCGNKG-MHKYVNRVFREMKSCGFEPNRDTFNALIGAYGR 502
Query: 327 IGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNS 386
G + KM EE + + N +L +++G E A++V+ ++ KG P S
Sbjct: 503 CGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETS 562
Query: 387 WSIIAAGYADKNN 399
+S++ YA N
Sbjct: 563 YSLMLNCYAKGGN 575
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 127/307 (41%), Gaps = 49/307 (15%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ AL+ Y R G + + + ++M + G YN ++ G E V+LDMK
Sbjct: 493 FNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMK 552
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G P+ SY + +N Y +E + +E+ + HI W T+ ++A K
Sbjct: 553 SKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYN-GHIFPSWILLRTL----VLANFK 607
Query: 260 EKAIIYLKK-----CE--------------DIVSKSK-------------------DALG 281
+A++ +++ C+ I +K+K D +
Sbjct: 608 RRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVT 667
Query: 282 YNHLISHYASLG---NKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLE 338
YN L+ YA G +E++K G+QK K L Y T++ + G ++EA + L
Sbjct: 668 YNSLMDMYARGGECWKGEEILK--GIQKSGGKPDL-VSYNTVIKGFCRQGLMQEAIRTLS 724
Query: 339 EWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKN 398
E +S N + GYS KGM + + V+ +++ P ++ I+ GY
Sbjct: 725 EMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGK 784
Query: 399 NMEKAFE 405
++A +
Sbjct: 785 KYKEAMD 791
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 136/294 (46%), Gaps = 9/294 (3%)
Query: 111 LDLIGKVRGLESAETYFNSLNDEDKVD------KLYGALLNCYVREGLVDESLSLMQKMK 164
++L+ ++ G ES + L DE V+ + + +L+ Y R G + ++++ +KM+
Sbjct: 177 VELMVRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKMR 236
Query: 165 EMGSFGSALNYNGIMCLYTNTGQH-EKIPDVLLDMKENGVPPDNFSYRICINSYGARSEL 223
+ G + + YN ++ +Y G+ KI +L +M+ NG+ D F+ I++ G L
Sbjct: 237 KTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLL 296
Query: 224 SSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYN 283
++S+ +++ + TY+++ + AG+ +A+ LK+ E + D + YN
Sbjct: 297 DEARKFFARLKSEGYVAGTF-TYNSLLQVFGKAGIYSEALSILKEMEK-NNCPPDLVTYN 354
Query: 284 HLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELS 343
L++ Y G +E F K Y T++ + K G+ ++A + + S
Sbjct: 355 ELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKES 414
Query: 344 CYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADK 397
+ N IL +K +E+ +L ++ G P +W+ + A +K
Sbjct: 415 GCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNK 468
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 117/272 (43%), Gaps = 8/272 (2%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ++N Y + G D++LS ++MKE G + YN I+ + + E++ D+L DM+
Sbjct: 388 YTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMR 447
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
NG P++ ++ + G + + V +EM+S + T++ + Y G
Sbjct: 448 SNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKS-CGFEPNRDTFNALIGAYGRCG-- 504
Query: 260 EKAIIYLKKCEDIVSK--SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
I +K E+++ + YN L++ A G+ + K K K Y
Sbjct: 505 -SQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSY 563
Query: 318 ITMLGSLVKIGELEEAEKMLEE-WELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
ML K G EK+ EE + + + ++L + ++ ++ A +E
Sbjct: 564 SLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRALMGMERA-FQEFC 622
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMK 408
K G P ++ + + +A ++A E ++
Sbjct: 623 KHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLR 654
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 65/136 (47%), Gaps = 8/136 (5%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
L+ ++L+ + + + D + +++ ++E G + YN +M +Y G+ K ++L +
Sbjct: 632 LFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGI 691
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
+++G PD SY I + + + L EM + S I TY+T +AG
Sbjct: 692 QKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEM-TISGIRPCIVTYNT-----FVAGY 745
Query: 259 KEKAIIYLKKCEDIVS 274
K + + E+++S
Sbjct: 746 SGKGM--FSEVEEVIS 759
>gi|147825385|emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
Length = 821
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 135/313 (43%), Gaps = 16/313 (5%)
Query: 95 MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGL 152
M GL F + + G+ L+ A +F L E V Y +LL + + G+
Sbjct: 271 MRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGI 330
Query: 153 VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
E+LS++++M++ + YN ++ Y G HE+ D + M G+ P+ +Y
Sbjct: 331 YSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTT 390
Query: 213 CINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDI 272
IN+YG + + ++M+ G V Y I G+ K + + +
Sbjct: 391 VINAYGKAGKEDKALSFFRQMKES-------GCVPNVCTYNAILGMLGKKSRLEEMIDML 443
Query: 273 VSKSKDALGYNHLI--SHYASLGNKDEMMKFWG--LQKIK-CKKQLNRD-YITMLGSLVK 326
+ N + + A GNK M K+ +++K C + NRD + ++G+ +
Sbjct: 444 CDMRSNGCAPNSVTWNTMLAMCGNKG-MHKYVNRVFREMKSCGFEPNRDTFNALIGAYGR 502
Query: 327 IGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNS 386
G + KM EE + + N +L +++G E A++V+ ++ KG P S
Sbjct: 503 CGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETS 562
Query: 387 WSIIAAGYADKNN 399
+S++ YA N
Sbjct: 563 YSLMLNCYAKGGN 575
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 127/307 (41%), Gaps = 49/307 (15%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ AL+ Y R G + + + ++M + G YN ++ G E V+LDMK
Sbjct: 493 FNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMK 552
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G P+ SY + +N Y +E + +E+ + HI W T+ ++A K
Sbjct: 553 SKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYN-GHIFPSWILLRTL----VLANFK 607
Query: 260 EKAIIYLKK-----CE--------------DIVSKSK-------------------DALG 281
+A++ +++ C+ I +K+K D +
Sbjct: 608 RRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVT 667
Query: 282 YNHLISHYASLG---NKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLE 338
YN L+ YA G +E++K G+QK K L Y T++ + G ++EA + L
Sbjct: 668 YNSLMDMYARGGECWKGEEILK--GIQKSGGKPDL-VSYNTVIKGFCRQGLMQEAIRTLS 724
Query: 339 EWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKN 398
E +S N + GYS KGM + + V+ +++ P ++ I+ GY
Sbjct: 725 EMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGK 784
Query: 399 NMEKAFE 405
++A +
Sbjct: 785 KYKEAMD 791
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 136/294 (46%), Gaps = 9/294 (3%)
Query: 111 LDLIGKVRGLESAETYFNSLNDEDKVD------KLYGALLNCYVREGLVDESLSLMQKMK 164
++L+ ++ G ES + L DE V+ + + +L+ Y R G + ++++ +KM+
Sbjct: 177 VELMVRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKMR 236
Query: 165 EMGSFGSALNYNGIMCLYTNTGQH-EKIPDVLLDMKENGVPPDNFSYRICINSYGARSEL 223
+ G + + YN ++ +Y G+ KI +L +M+ NG+ D F+ I++ G L
Sbjct: 237 KTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLL 296
Query: 224 SSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYN 283
++S+ +++ + TY+++ + AG+ +A+ LK+ E + D + YN
Sbjct: 297 DEARKFFARLKSEGYVAGTF-TYNSLLQVFGKAGIYSEALSILKEMEK-NNCPPDLVTYN 354
Query: 284 HLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELS 343
L++ Y G +E F K Y T++ + K G+ ++A + + S
Sbjct: 355 ELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKES 414
Query: 344 CYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADK 397
+ N IL +K +E+ +L ++ G P +W+ + A +K
Sbjct: 415 GCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNK 468
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 117/272 (43%), Gaps = 8/272 (2%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ++N Y + G D++LS ++MKE G + YN I+ + + E++ D+L DM+
Sbjct: 388 YTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMR 447
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
NG P++ ++ + G + + V +EM+S + T++ + Y G
Sbjct: 448 SNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKS-CGFEPNRDTFNALIGAYGRCG-- 504
Query: 260 EKAIIYLKKCEDIVSK--SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
I +K E+++ + YN L++ A G+ + K K K Y
Sbjct: 505 -SQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSY 563
Query: 318 ITMLGSLVKIGELEEAEKMLEE-WELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
ML K G EK+ EE + + + ++L + ++ ++ A +E
Sbjct: 564 SLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRALMGMERA-FQEFC 622
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMK 408
K G P ++ + + +A ++A E ++
Sbjct: 623 KHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLR 654
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 65/136 (47%), Gaps = 8/136 (5%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
L+ ++L+ + + + D + +++ ++E G + YN +M +Y G+ K ++L +
Sbjct: 632 LFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGI 691
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
+++G PD SY I + + + L EM + S I TY+T +AG
Sbjct: 692 QKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEM-TISGIRPCIVTYNT-----FVAGY 745
Query: 259 KEKAIIYLKKCEDIVS 274
K + + E+++S
Sbjct: 746 SGKGM--FSEVEEVIS 759
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/383 (20%), Positives = 165/383 (43%), Gaps = 11/383 (2%)
Query: 34 VARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSE 93
V N L + G D +L+ + + V EG + + ++ L KHA++V +
Sbjct: 274 VTVNVLINGFCKQGRIDQALS-FIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVD 332
Query: 94 WMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDK--LYGALLNCYVREG 151
M GL ++ + + + K+ +E A + + D Y A+++ +E
Sbjct: 333 AMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKEN 392
Query: 152 LVDESLSLMQKMKEMGSFGSALNYNGI---MCLYTNTGQHEKIPDVLLDMKENGVPPDNF 208
VDE+ + + + G +N + +CL +N H+ D+ +MK G PD F
Sbjct: 393 RVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSN---HKSAMDLFEEMKGKGCRPDEF 449
Query: 209 SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKK 268
+Y + I+S + +L N+L+EME + + Y+T+ + + E+A +
Sbjct: 450 TYNMLIDSLCSSRKLEEALNLLKEMELNG-CARNVVIYNTLIDGFCKNKRIEEAEEIFDE 508
Query: 269 CEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIG 328
E + S+D++ YN LI ++ + ++ + Y ++L K G
Sbjct: 509 ME-LQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTG 567
Query: 329 ELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWS 388
++++A +++ S D ++ G + G ++ A +L+ I KG TP++++
Sbjct: 568 DIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYN 627
Query: 389 IIAAGYADKNNMEKAFECMKEAL 411
+ +N +A +E L
Sbjct: 628 PVIQALFKRNRTHEAMRLFREML 650
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/318 (20%), Positives = 130/318 (40%), Gaps = 13/318 (4%)
Query: 136 VDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVL 195
D L+N + ++G +D++LS +Q+ G YN ++ G + +V+
Sbjct: 272 TDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVV 331
Query: 196 LDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYII 255
M G+ PD ++Y I+ E+ +L +M +S D + N I
Sbjct: 332 DAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQM-----VSRDCSPNAVTYNAIIS 386
Query: 256 AGLKEKAIIYLKKCEDIVSKS---KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQ 312
+ KE + + +++ D +N LI N M + K K +
Sbjct: 387 SLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRP 446
Query: 313 LNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
Y ++ SL +LEEA +L+E EL+ + + N ++ G+ + IE+A+ +
Sbjct: 447 DEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIF 506
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILD 432
E+ +G + +++ + G +E A + M + + + RP +S+L
Sbjct: 507 DEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIM-----EGLRPDKFTYNSLLT 561
Query: 433 WLGDNRDVEEVEAFVSSL 450
D+++ V ++
Sbjct: 562 HFCKTGDIKKAADIVQTM 579
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 71/355 (20%), Positives = 139/355 (39%), Gaps = 33/355 (9%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ L+ + V ++ +M++M G + IM Y G + + M
Sbjct: 206 FNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMV 265
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E G P + + + IN + + + + +QE S+ D TY+T+ N G
Sbjct: 266 EYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEG-FRPDQFTYNTLVNGLCKIGHA 324
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD--- 316
+ A+ + + D YN LIS LG +E +K + ++RD
Sbjct: 325 KHAMEVVDAML-LGGLDPDIYTYNSLISGLCKLGEIEEAVKIL-------DQMVSRDCSP 376
Query: 317 ----YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
Y ++ SL K ++EA ++ D N ++ G + A +
Sbjct: 377 NAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLF 436
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILD 432
+E+ KG P +++++ +E+A +KE E N R + ++++D
Sbjct: 437 EEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEM----ELNGCAR-NVVIYNTLID 491
Query: 433 WLGDNRDVEEVEAFVSSLKIKVQKRN--MYHALTEAHIRSGQEVDGLLESMKADD 485
N+ +EE E ++++ R+ Y+ L +DGL +S + +D
Sbjct: 492 GFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTL----------IDGLCKSKRVED 536
>gi|255660884|gb|ACU25611.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 484
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 93/432 (21%), Positives = 184/432 (42%), Gaps = 32/432 (7%)
Query: 79 LRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAETYFNSLN------ 131
L S K +HALQ W+ L + H ++++G+ L A +
Sbjct: 19 LHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEW 78
Query: 132 DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
DED ++ +++ Y +E +V ES+ + QKM+E+G + +YN + + G++
Sbjct: 79 DED----MWVMMIDSYGKEXIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMA 134
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
M G+ P ++ + I + ++ + ++M+S+ IS D TY+T+ N
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR-EISPDVVTYNTMIN 193
Query: 252 -YYIIAGLKEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
YY + ++E +++ K +I + Y LI Y S+ D+ ++ K
Sbjct: 194 GYYRVKKMEEAEKYFVEMKGRNI---EPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFG 250
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYC--YDFRVPNIILLGYSQKGMIEK 367
K Y T+L L + EA +L+E + Y D + ++ + + G ++
Sbjct: 251 IKPNAITYSTLLPGLCNAEXMSEARVILKEM-MDKYLAPTDNSIFMRLISSHCKSGNLDA 309
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPK---- 423
A VLK +++ + + + +KA + + + + E++ RP+
Sbjct: 310 AADVLKAMIRLSVPTEAGHYGXLIENFCKXGQYDKAVKLLDKLI---EKDIILRPQSTLH 366
Query: 424 --PSLVSSILDWLGDNRDVEEVEAFVSSL-KIKVQKRNMYHALTEAHIRSGQEVDG--LL 478
PS + ++++L +N + E V L K+ VQ + L H + G LL
Sbjct: 367 LEPSAYNPMIEYLCNNGQAXKAETLVRQLXKLGVQDPTALNTLIRGHSQEGSPDSAFELL 426
Query: 479 ESMKADDIDEDK 490
+ M +D +K
Sbjct: 427 KIMLRRKVDSEK 438
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 139/330 (42%), Gaps = 54/330 (16%)
Query: 116 KVRGLESAETYFNSL---NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
+V+ +E AE YF + N E V Y L+ YV VD++L L+++MK G +A
Sbjct: 197 RVKKMEEAEKYFVEMKGRNIEPTV-VTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNA 255
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP-DNFSYRICINSYGARSELSSMENVLQ 231
+ Y+ ++ N + +L +M + + P DN + I+S+ L + +VL+
Sbjct: 256 ITYSTLLPGLCNAEXMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLK 315
Query: 232 EMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC--EDIVSKSKDAL-----GYNH 284
M S + + G Y + + G +KA+ L K +DI+ + + L YN
Sbjct: 316 AMIRLS-VPTEAGHYGXLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNP 374
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSC 344
+I + + G Q K + T++ L K+G
Sbjct: 375 MIEYLCNNG-----------QAXKAE--------TLVRQLXKLG---------------- 399
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
D N ++ G+SQ+G + A +LK ++++ ++++ + Y KN A
Sbjct: 400 -VQDPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDA- 457
Query: 405 ECMKEALAVHEENKFWRPKPSLVSSILDWL 434
K AL EN P +L S+++ L
Sbjct: 458 ---KAALDSMIENDHL-PDSALFRSVMESL 483
>gi|387219245|gb|AFJ69331.1| putative udp-glucosyltransferase, partial [Nannochloropsis gaditana
CCMP526]
Length = 521
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 121/273 (44%), Gaps = 17/273 (6%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFG------------SALNYNGIMCLYTNTGQ 187
Y L++ Y G + + +++++M E G G + + Y +M Y G
Sbjct: 231 YTTLMHAYAGRGDTEGAEAVLRRMLE-GEGGRVREEEVLRVLPNVMTYTTLMTAYAAGGD 289
Query: 188 HEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYS 247
E VL M+E + P+ +Y + + +Y R ++ E VL+ M S ++++ + TY+
Sbjct: 290 VEGSEAVLERMEEACIAPNVMTYTVLMTAYTLRGDVKGAEGVLRRMIS-AYVAPNANTYT 348
Query: 248 TVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKI 307
T+ + Y + G A L + E AL + L++ YA+ G + +
Sbjct: 349 TLLHAYTVNGNAAGAEEVLARME-AAGVLPTALTFATLMTVYAARGEVESAKGVLARMEA 407
Query: 308 KCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVP-NIILLGYSQKGMIE 366
+ T+L + V G++ AE++L E Y DF + N ++ GY+ KG +
Sbjct: 408 AGVGPTAMAFDTLLNAYVVAGDVGGAEQVLRRREAEAYP-DFPLTYNTLMNGYADKGDVA 466
Query: 367 KADAVLKEIVKKGKTPTPNSWSIIAAGYADKNN 399
A+ VL + KG P + S + YA+ +
Sbjct: 467 GAEGVLARMRAKGVGPDETTLSTLLHAYAEAGD 499
>gi|297806463|ref|XP_002871115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316952|gb|EFH47374.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 942
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 153/326 (46%), Gaps = 16/326 (4%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV--DKLYGALLN 145
AL M +G+ S+ ++V + K E+A+ +F+ K +YG ++
Sbjct: 364 ALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGNAEAADHWFDEAKRIHKTLNASIYGKIIY 423
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
+ + ++ + +L+++M+E G Y+ +M YT +K V +KE G P
Sbjct: 424 AHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIVFKRLKECGFTP 483
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
+Y IN Y ++S V + M+ + + + TYS + N ++ LK+ A +
Sbjct: 484 TVVTYGCLINLYTKVGKISKALEVSRVMKEEG-VKHNLKTYSMMINGFV--KLKDWANAF 540
Query: 266 LKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMK-FWGLQKIKCKKQLNRDYITMLG 322
ED+V + D + YN++I+ + +GN D ++ +QK++ + R ++ ++
Sbjct: 541 -AVFEDMVKEGMKPDVILYNNIIAAFCGMGNMDRAIQTVKEMQKLR-HRPTTRTFMPIIN 598
Query: 323 SLVKIGELEEAEKMLEEWEL--SCYCY-DFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
K G++ + LE +++ C C N ++ G +K +EKA +L E+ G
Sbjct: 599 GFAKSGDMRRS---LEVFDMMRRCGCVPTVHTFNALINGLVEKRQMEKAVEILDEMTLAG 655
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFE 405
+ ++++ I GYA + KAFE
Sbjct: 656 VSANEHTYTKIMQGYASVGDTGKAFE 681
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 120/270 (44%), Gaps = 2/270 (0%)
Query: 136 VDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVL 195
++Y +L++ Y ++E+LS ++KMKE G S + Y+ I+ ++ G E
Sbjct: 344 TSRIYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGNAEAADHWF 403
Query: 196 LDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYII 255
+ K + Y I ++ + E +++EME + I Y T+ + Y +
Sbjct: 404 DEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEG-IDAPIAIYHTMMDGYTM 462
Query: 256 AGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR 315
++K +I K+ ++ + + Y LI+ Y +G + ++ + K + K +
Sbjct: 463 VADEKKGLIVFKRLKE-CGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLK 521
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
Y M+ VK+ + A + E+ D + N I+ + G +++A +KE+
Sbjct: 522 TYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIIAAFCGMGNMDRAIQTVKEM 581
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
K PT ++ I G+A +M ++ E
Sbjct: 582 QKLRHRPTTRTFMPIINGFAKSGDMRRSLE 611
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 120/253 (47%), Gaps = 5/253 (1%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I L +++ + A+++ + M+ G++ + H + + V A YF L +E
Sbjct: 631 LINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEG 690
Query: 135 -KVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+VD Y ALL + G + +L++ ++M ++ YN ++ + G +
Sbjct: 691 LEVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAA 750
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
D++ MK+ GV PD +Y I++ +++ ++EME+ + + TY+T+
Sbjct: 751 DLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALG-VKPNIKTYTTLIKG 809
Query: 253 YIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQ 312
+ A L EKA+ ++ + + K A+ Y+ L++ S + E + G+ I CK+
Sbjct: 810 WARASLPEKALSCYEEMKAVGLKPDKAV-YHCLLTSLLSRASIAEAYIYSGVMTI-CKEM 867
Query: 313 LNRDYITMLGSLV 325
+ I +G+ V
Sbjct: 868 VEAGLIVDMGTAV 880
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/335 (18%), Positives = 142/335 (42%), Gaps = 10/335 (2%)
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED-KVDK-LYG 141
+ AL+VS M +G+ ++ +++ ++ K++ +A F + E K D LY
Sbjct: 500 KISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYN 559
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
++ + G +D ++ +++M+++ + + I+ + +G + +V M+
Sbjct: 560 NIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDMRRSLEVFDMMRRC 619
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
G P ++ IN + ++ +L EM + + +S + TY+ + Y G K
Sbjct: 620 GCVPTVHTFNALINGLVEKRQMEKAVEILDEM-TLAGVSANEHTYTKIMQGYASVGDTGK 678
Query: 262 AIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD---YI 318
A Y + ++ D Y L+ G M + K + + R+ Y
Sbjct: 679 AFEYFTRLQN-EGLEVDIFTYEALLKACCKSGR---MQSALAVTKEMSARNIPRNSFVYN 734
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
++ + G++ EA ++++ + D + S+ G + +A ++E+
Sbjct: 735 ILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEAL 794
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAV 413
G P +++ + G+A + EKA C +E AV
Sbjct: 795 GVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAV 829
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 119/273 (43%), Gaps = 16/273 (5%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+ Y REGL++E+ +M M + G S YN I+ G++ + +L++M
Sbjct: 4 YNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEML 63
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G+ PD +Y + R S + + EM Q + D ++S++ +
Sbjct: 64 NIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVP-DLVSFSSLMAVFSRNRHL 122
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGN-------KDEMMKFWGLQKIKCKKQ 312
++A++Y + + D + Y L+ Y GN +DEM++ + +
Sbjct: 123 DQALVYFRDMKKF-GLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIA--- 178
Query: 313 LNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
Y T+L L K L +A+K+ +E DF ++ G+ Q G + KA ++
Sbjct: 179 ----YNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLF 234
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
+ ++ P +++ + G+ MEKA E
Sbjct: 235 GTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASE 267
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 131/317 (41%), Gaps = 51/317 (16%)
Query: 82 RKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV--DKL 139
R F A ++ M QG+ + + + + + R L+ A YF + V + +
Sbjct: 84 RDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVI 143
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI---PDVLL 196
Y L++ Y R G + E+L + +M E G + YN I+ N EK+ D L
Sbjct: 144 YTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTIL----NGLCKEKMLTDADKLF 199
Query: 197 D-MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYII 255
D M E G PD +++ I+ + ++ ++ M +Q +I D Y+T+ + +
Sbjct: 200 DEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTM-TQRNIKPDIVAYNTLIDGFCK 258
Query: 256 AGLKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQL 313
G EKA + + ++S+ + + Y LI+ Y S+G+ E + W +
Sbjct: 259 VGEMEKAS---ELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVM-------- 307
Query: 314 NRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
EK ++ ++C N ++ GY + G KAD L
Sbjct: 308 -------------------IEKGIKPTLVTC--------NTVIKGYCRSGDSSKADEFLG 340
Query: 374 EIVKKGKTPTPNSWSII 390
++ KG P S++ +
Sbjct: 341 RMIAKGVAPDHISYNTL 357
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 118/282 (41%), Gaps = 20/282 (7%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y LL R E+ + +M G ++++ +M +++ ++ DMK
Sbjct: 74 YNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMK 133
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL- 258
+ G+ PDN Y + ++ Y + + EM Q + +D Y+T+ N GL
Sbjct: 134 KFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCV-LDVIAYNTILN-----GLC 187
Query: 259 KEKAIIYLKKCED-IVSKSK--DALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR 315
KEK + K D +V + D + LI + GN + + +G + K
Sbjct: 188 KEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIV 247
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLG-----YSQKGMIEKADA 370
Y T++ K+GE+E+A ++ W+ F PN I G Y G + +A
Sbjct: 248 AYNTLIDGFCKVGEMEKASEL---WDGMISRKIF--PNHITYGILINAYCSVGHVSEAFR 302
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
+ +++KG PT + + + GY + KA E + +A
Sbjct: 303 LWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIA 344
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 104/246 (42%), Gaps = 30/246 (12%)
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQE 232
+ YN ++ Y G E+ +++ M + G+ P F+Y IN + + + +L E
Sbjct: 2 VTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIE 61
Query: 233 MESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC-EDIVSKSKDALG---------- 281
M + +S D TY+T + ++ C D S++K+ G
Sbjct: 62 MLNIG-LSPDTTTYNT---------------LLVESCRRDNFSEAKEIFGEMLRQGVVPD 105
Query: 282 ---YNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLE 338
++ L++ ++ + D+ + ++ K N Y ++ + G + EA K+ +
Sbjct: 106 LVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRD 165
Query: 339 EWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKN 398
E D N IL G ++ M+ AD + E+V++G P +++ + G+
Sbjct: 166 EMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDG 225
Query: 399 NMEKAF 404
NM KA
Sbjct: 226 NMTKAL 231
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 95/204 (46%), Gaps = 8/204 (3%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYG--ALLN 145
AL++ + M QG V + L+ + K + L A+ F+ + + + Y L++
Sbjct: 160 ALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIH 219
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
+ ++G + ++LSL M + + YN ++ + G+ EK ++ M + P
Sbjct: 220 GHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFP 279
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
++ +Y I IN+Y + +S L ++ + I T +TV Y +G KA +
Sbjct: 280 NHITYGILINAYCSVGHVSEAFR-LWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEF 338
Query: 266 LKKCEDIVSK--SKDALGYNHLIS 287
L + +++K + D + YN LI+
Sbjct: 339 LGR---MIAKGVAPDHISYNTLIN 359
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 37/82 (45%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
YG L+N Y G V E+ L M E G + + N ++ Y +G K + L M
Sbjct: 284 YGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMI 343
Query: 200 ENGVPPDNFSYRICINSYGARS 221
GV PD+ SY IN RS
Sbjct: 344 AKGVAPDHISYNTLINDGKRRS 365
>gi|302819880|ref|XP_002991609.1| hypothetical protein SELMODRAFT_133813 [Selaginella moellendorffii]
gi|300140642|gb|EFJ07363.1| hypothetical protein SELMODRAFT_133813 [Selaginella moellendorffii]
Length = 356
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 119/245 (48%), Gaps = 9/245 (3%)
Query: 165 EMGSFGSAL---NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARS 221
E+ S G AL +YN ++C +T G +K+ +V+ +M + PD FS+ I +Y
Sbjct: 88 EIKSRGVALTLRSYNVVICAFTKEGSIDKVEEVIREMIRQELRPDLFSFNALIAAYAMSR 147
Query: 222 ELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSK-DAL 280
+ V M++ + D TY+T+ + + + ++AI + E +V+K + D
Sbjct: 148 KPERGLQVFSNMKAAGVLP-DIVTYTTLIQMFSRSSMHKEAIEMFE--EMVVNKCQPDFF 204
Query: 281 GYNHLISHYASLG-NKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEE 339
Y+ L+S Y G D ++ F LQ ++ + Y +++ + + G LEE+ K +
Sbjct: 205 VYSLLVSVYGKAGLVADALLIFHRLQ-LEGHRPNIVTYTSLISAHLHKGLLEESRKHFSQ 263
Query: 340 WELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNN 399
E D + N ++ Y++ GM+ A +L + +G P S++II G+ +
Sbjct: 264 MEAYGCRADVHLLNTMIDAYAKAGMVNDAANLLHRLTAQGVCPNRASYAIIVEGFLHAGH 323
Query: 400 MEKAF 404
+E+A
Sbjct: 324 VEEAL 328
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 53/267 (19%), Positives = 117/267 (43%), Gaps = 17/267 (6%)
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
+L R L++++ L Q +K + + YN ++ Y + + DV M G
Sbjct: 2 VLGILSRARLIEDAEELFQWIK-LQDWDKLRPYNAMIAAYYQAKRPKDAWDVYHQMLAEG 60
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
+ PD +Y I ++ G ++ + E++S+ +++ +Y+ V I A KE +
Sbjct: 61 IDPDEVTYDILVSGSGKNG--YPIDRLFLEIKSRG-VALTLRSYNVV----ICAFTKEGS 113
Query: 263 IIYLKKCEDIVSK------SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
I K E+++ + D +N LI+ YA + ++ + K
Sbjct: 114 I---DKVEEVIREMIRQELRPDLFSFNALIAAYAMSRKPERGLQVFSNMKAAGVLPDIVT 170
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y T++ + +EA +M EE ++ DF V ++++ Y + G++ A + +
Sbjct: 171 YTTLIQMFSRSSMHKEAIEMFEEMVVNKCQPDFFVYSLLVSVYGKAGLVADALLIFHRLQ 230
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKA 403
+G P +++ + + + K +E++
Sbjct: 231 LEGHRPNIVTYTSLISAHLHKGLLEES 257
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/196 (19%), Positives = 86/196 (43%), Gaps = 6/196 (3%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ AL+ Y + L + MK G + Y ++ +++ + H++ ++ +M
Sbjct: 136 FNALIAAYAMSRKPERGLQVFSNMKAAGVLPDIVTYTTLIQMFSRSSMHKEAIEMFEEMV 195
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
N PD F Y + ++ YG ++ + ++ + H + TY+++ + ++ GL
Sbjct: 196 VNKCQPDFFVYSLLVSVYGKAGLVADALLIFHRLQLEGH-RPNIVTYTSLISAHLHKGLL 254
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQL-NR-DY 317
E++ + + E ++ D N +I YA G ++ L ++ + NR Y
Sbjct: 255 EESRKHFSQMEAYGCRA-DVHLLNTMIDAYAKAGMVNDAANL--LHRLTAQGVCPNRASY 311
Query: 318 ITMLGSLVKIGELEEA 333
++ + G +EEA
Sbjct: 312 AIIVEGFLHAGHVEEA 327
>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like, partial [Brachypodium distachyon]
Length = 907
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 128/305 (41%), Gaps = 6/305 (1%)
Query: 147 YVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPD 206
Y R+G V + +++M+EMG + + Y+ +M Y GQ E +L ++ G+ P+
Sbjct: 174 YCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPN 233
Query: 207 NFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYL 266
+Y + + Y + E V++E++ I +D Y + N Y G E A
Sbjct: 234 VVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVR 293
Query: 267 KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVK 326
+ D + YN +I+ Y LG E+ K + + Y T++ +
Sbjct: 294 DEMID-AGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCR 352
Query: 327 IGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNS 386
G + +A + + + + N +L G+ +G I+ A + ++K+G P S
Sbjct: 353 KGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEIS 412
Query: 387 WSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAF 446
S + G+ E+A KE LA + ++++++ L NR + E E
Sbjct: 413 CSTLLDGFFKAGKTEQALNLWKETLA-----RGLARNVVTINTVINGLCKNRRMTEAEEL 467
Query: 447 VSSLK 451
+K
Sbjct: 468 FHRMK 472
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 115/275 (41%), Gaps = 36/275 (13%)
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSF----GSALN----------------------YN 176
L++C+ REG VDE+ ++QK+ + S LN +N
Sbjct: 591 LVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWN 650
Query: 177 GIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQ 236
++ G+ ++ D+K G PDNF+Y I+ A + + EM S
Sbjct: 651 IVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLS- 709
Query: 237 SHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKD 296
+ ++ + TY+++ + +A+ K + S +A+ YN LI + GN
Sbjct: 710 ARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQS-KGISPNAITYNTLIDGHCKDGNTT 768
Query: 297 EMMKFWGLQKIKCKKQLNR---DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPN 353
E K L++ K+ + Y ++ L G +EEA K+L++ + +F
Sbjct: 769 EAFK---LKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYW 825
Query: 354 IILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWS 388
++ GY++ G ++ + E+ G P +W+
Sbjct: 826 TLIQGYARCGNMKAITKLYNEMHICGLLPA--NWT 858
>gi|255546465|ref|XP_002514292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546748|gb|EEF48246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 608
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 142/304 (46%), Gaps = 28/304 (9%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
LY A++N + G V E++ + QKMK+ G + +N ++ Y N G+ E+ +L M
Sbjct: 130 LYNAMINAFSESGNVKEAMKIFQKMKDTGCKPTTSTFNTLIKGYGNAGKPEEGLKMLHLM 189
Query: 199 KENG-VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
+G V P++ +Y I + ++ ++ + NVL +M + S I D TY+ +A Y G
Sbjct: 190 SLDGSVKPNDRTYNILVRAWCSKKNIEEAWNVLHKMVA-SGIQPDVVTYNILARAYAQKG 248
Query: 258 --LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKF-WGLQKIKCKKQLN 314
L+ + +I + E + + +++ Y GN E ++F + ++++ L
Sbjct: 249 ETLRAEDLILEMQYEKVAPNERTC---GIIVNGYCKEGNMIEALRFVYRMKELGVHPNL- 304
Query: 315 RDYITMLGSLVK-------IGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEK 367
+ SL+K ++EA ++EE+ + F + I+ +S G+++K
Sbjct: 305 ----VIFNSLIKGFLDITDTDGVDEALTLMEEYGVKPDVITF---STIMNAWSSAGLMDK 357
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLV 427
+ ++ K G P +++SI+A GY E A E++ RP +
Sbjct: 358 CQEIFNDMAKAGIEPDIHAFSILAKGYVRAGETENA-----ESVLTSMAKSGVRPNVVIC 412
Query: 428 SSIL 431
++I+
Sbjct: 413 TTII 416
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 122/315 (38%), Gaps = 46/315 (14%)
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
L+N + +G E+ + + E G + + Y ++ T E I ++ ++ENG
Sbjct: 64 LMNILIGKGKPHEANLIFDNLVEDGHRPTLITYTTLVAALTKLKHFESIFLLISKVEENG 123
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
+ PD+ Y IN++ + + Q+M+ D G T +
Sbjct: 124 MKPDSILYNAMINAFSESGNVKEAMKIFQKMK-------DTGCKPTTST----------- 165
Query: 263 IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN-RDYITML 321
+N LI Y + G +E +K L + + N R Y ++
Sbjct: 166 -------------------FNTLIKGYGNAGKPEEGLKMLHLMSLDGSVKPNDRTYNILV 206
Query: 322 GSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKT 381
+ +EEA +L + S D NI+ Y+QKG +A+ ++ E+ +
Sbjct: 207 RAWCSKKNIEEAWNVLHKMVASGIQPDVVTYNILARAYAQKGETLRAEDLILEMQYEKVA 266
Query: 382 PTPNSWSIIAAGYADKNNMEKAFEC---MKEALAVHEENKFWRPKPSLVSSILDWLGDNR 438
P + II GY + NM +A MKE L VH + SL+ LD + D
Sbjct: 267 PNERTCGIIVNGYCKEGNMIEALRFVYRMKE-LGVHPNLVIFN---SLIKGFLD-ITDTD 321
Query: 439 DVEEVEAFVSSLKIK 453
V+E + +K
Sbjct: 322 GVDEALTLMEEYGVK 336
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
Query: 137 DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
++ G ++N Y +EG + E+L + +MKE+G + + +N ++ + + + + + L
Sbjct: 269 ERTCGIIVNGYCKEGNMIEALRFVYRMKELGVHPNLVIFNSLIKGFLDITDTDGVDEALT 328
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
M+E GV PD ++ +N++ + + + + +M +++ I D +S +A Y+ A
Sbjct: 329 LMEEYGVKPDVITFSTIMNAWSSAGLMDKCQEIFNDM-AKAGIEPDIHAFSILAKGYVRA 387
Query: 257 GLKEKA 262
G E A
Sbjct: 388 GETENA 393
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 149/342 (43%), Gaps = 15/342 (4%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +++ ++ LV++++ + +M G A+ YN I+ GQ + + M+
Sbjct: 236 YNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRME 295
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+NG PD +Y I I+S ++ + L EM Q I D TY+T+ + G
Sbjct: 296 QNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQG-IPPDVVTYTTILHGLCYLGQL 354
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
+AI KK E K D + YN +I ++ M+F + Y T
Sbjct: 355 NEAIRLFKKMEQKGCKP-DVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYST 413
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
+L +G+L+EA ++ +E + +I++ G Q+GM+ +A V + + +KG
Sbjct: 414 ILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKG 473
Query: 380 KTPTPNSWSIIAAGYADK---NNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGD 436
P +++ + GY + N K FE M K P + +++ +
Sbjct: 474 VEPNIYTYNALMNGYCLRCKMNEARKVFEIM--------VGKGCAPDLHSYNILINGYCN 525
Query: 437 NRDVEEVEAFVSSLKIKVQKRN--MYHALTEAHIRSGQEVDG 476
+R +++ +A ++ + +K N Y+ + + G+ +D
Sbjct: 526 SRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDA 567
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 80/369 (21%), Positives = 143/369 (38%), Gaps = 25/369 (6%)
Query: 110 QLDLIGKVRGLESAETYFNSLNDEDKVD----------KL--------YGALLNCYVREG 151
Q+DL G + S N L + VD KL + L+N EG
Sbjct: 118 QMDLFGVTHTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEG 177
Query: 152 LVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYR 211
+ ++ L +M G ++YN ++ N+G V M++NG P+ +Y
Sbjct: 178 KIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYN 237
Query: 212 ICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCED 271
I+S ++ + L EM + I D TY+++ + G +A K+ E
Sbjct: 238 TIIDSLCKDRLVNDAMDFLSEMVGRG-IPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQ 296
Query: 272 IVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELE 331
K D + YN +I ++ F + Y T+L L +G+L
Sbjct: 297 NGCKP-DVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLN 355
Query: 332 EAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIA 391
EA ++ ++ E D N I+ + ++ A L E+V +G P ++S I
Sbjct: 356 EAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTIL 415
Query: 392 AGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK 451
G+ + +++A + KE + + P S ++D L V E ++
Sbjct: 416 HGFCNLGQLDEATQLFKEMVG-----RNVMPNTLTFSILVDGLCQEGMVSEARWVFETMT 470
Query: 452 IKVQKRNMY 460
K + N+Y
Sbjct: 471 EKGVEPNIY 479
>gi|356527777|ref|XP_003532484.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 583
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 95/409 (23%), Positives = 167/409 (40%), Gaps = 78/409 (19%)
Query: 35 ARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEW 94
AR L + + G P + V + EG K + + ++ L +KRFK
Sbjct: 24 ARTKLMNTLIGKGKPHEA-QAVFNNLTEEGHKPTLITYTTLVAALTRQKRFK-------- 74
Query: 95 MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVD 154
S L V D+ ++ D I L A++N + G VD
Sbjct: 75 -SIPALLSKVADNGMKPDSI------------------------LLNAMINAFSESGKVD 109
Query: 155 ESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQ-HEKIPDVLLDMKENGVPPDNFSYRIC 213
E++ + QKMKE G + YN ++ + G+ +E + + + ++ V P++ +Y I
Sbjct: 110 EAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYESMKLLEMMGQDENVKPNDRTYNIL 169
Query: 214 INSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA-IIYLKKCEDI 272
I ++ + +L NVL +M + S I D TY+T+A Y G E+A + LK +I
Sbjct: 170 IQAWCTKKKLEEAWNVLHKMVA-SGIQPDVVTYNTMARAYAQNGETERAERLILKMPYNI 228
Query: 273 VSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIK---------CKKQLNRDYI----- 318
V ++ G +IS Y GN E ++F L ++K L + Y+
Sbjct: 229 VKPNERTCGI--IISGYCKEGNMPEALRF--LYRMKELGVDPNPVVFNSLIKGYLDTTDT 284
Query: 319 -----------------------TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNII 355
T++ + G +E E++ + + D +I+
Sbjct: 285 NGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVKAGIEPDIHAYSIL 344
Query: 356 LLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
GY + G KA+A+L + K G P ++ I +G+ M++AF
Sbjct: 345 AKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFTTIISGWCAAGKMDRAF 393
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 160/350 (45%), Gaps = 24/350 (6%)
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
L+N + +G E+ ++ + E G + + Y ++ T + + IP +L + +NG
Sbjct: 28 LMNTLIGKGKPHEAQAVFNNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNG 87
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
+ PD+ IN++ ++ + Q+M+ + TY+T+ + IAG ++
Sbjct: 88 MKPDSILLNAMINAFSESGKVDEAMKIFQKMK-EYGCKPTTSTYNTLIKGFGIAGRPYES 146
Query: 263 IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD---YIT 319
+ L+ + + YN LI + + K ++ + W + + D Y T
Sbjct: 147 MKLLEMMGQDENVKPNDRTYNILIQAWCT---KKKLEEAWNVLHKMVASGIQPDVVTYNT 203
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
M + + GE E AE+++ + + + R II+ GY ++G + +A L + + G
Sbjct: 204 MARAYAQNGETERAERLILKMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELG 263
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLV--SSILD-W--L 434
P P ++ + GY D + + EAL + EE + KP +V S+I++ W
Sbjct: 264 VDPNPVVFNSLIKGYLDTTDTNG----VDEALTLMEE---FGIKPDVVTFSTIMNAWSSA 316
Query: 435 GDNRDVEEVEAFVSSLKIKVQKR-NMYHALTEAHIRSGQ--EVDGLLESM 481
G + EE+ F +K ++ + Y L + ++R+GQ + + LL SM
Sbjct: 317 GLMENCEEI--FNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAEALLTSM 364
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 79/165 (47%), Gaps = 2/165 (1%)
Query: 137 DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
++ G +++ Y +EG + E+L + +MKE+G + + +N ++ Y +T + + L
Sbjct: 233 ERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVVFNSLIKGYLDTTDTNGVDEALT 292
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
M+E G+ PD ++ +N++ + + + E + +M ++ I D YS +A Y+ A
Sbjct: 293 LMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDM-VKAGIEPDIHAYSILAKGYVRA 351
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKF 301
G KA L + + + +IS + + G D +
Sbjct: 352 GQPRKAEALLTSMSK-YGVQPNVVIFTTIISGWCAAGKMDRAFRL 395
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 159/378 (42%), Gaps = 31/378 (8%)
Query: 74 RVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE 133
++ Q+++ FKH L+ + M +L L GK +E D
Sbjct: 25 KMFNQVKTEDGFKHTLETYKCM------------IEKLGLHGKFEAMEDVLAEMRKNVDS 72
Query: 134 DKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPD 193
++ +Y ++ Y R+G V E++++ ++M S +YN IM + G +
Sbjct: 73 KMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHK 132
Query: 194 VLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYY 253
V + MK+ G+ PD +++ I + S+ ++ +L M Q ++ V+
Sbjct: 133 VYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQG------CEFNAVSYCA 186
Query: 254 IIAGL-KEKAIIYLKKCEDIVSK---SKDALGYNHLISHYASLGNKDEMMKFWG--LQKI 307
+I+G KE I D + K D L +N LI GN E K + +++
Sbjct: 187 VISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRG 246
Query: 308 KCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEK 367
C + + L + G ++EA ++LE D N ++ G+ + + +
Sbjct: 247 VCPNLFT--FNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVE 304
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLV 427
A+ L ++V G P +++ I G+ M+ A + +++A+ K + P
Sbjct: 305 AECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMF-----KGFIPDEFTY 359
Query: 428 SSILDWLGDNRDVEEVEA 445
SS+++ L ++ D+ A
Sbjct: 360 SSLINGLCNDGDMNRAMA 377
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/326 (20%), Positives = 131/326 (40%), Gaps = 38/326 (11%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
LY L+ ++GLV ++L LM+ M E G YN ++ G +L D
Sbjct: 393 LYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDA 452
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
G PD F++ I+ Y + + +L M S I+ D TY+T+ N
Sbjct: 453 IAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHG-ITPDVITYNTLLN------- 504
Query: 259 KEKAIIYLKKCEDIVSKSK---------DALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
+ +K +++V K + + YN LI + E M+ + K
Sbjct: 505 ---GLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMK--- 558
Query: 310 KKQLNRDYI---TMLGSLVKIGELEEAEKML----EEWELSCYCYDFRVPNIILLGYSQK 362
+ L D + T++ L GEL++A ++ +E++ S Y + NI++ + +K
Sbjct: 559 TRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFS---YSTAIFNIMINAFCEK 615
Query: 363 GMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRP 422
+ A+ + ++ P ++ ++ Y N++ A + E ++ K P
Sbjct: 616 LNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENIS-----KGLVP 670
Query: 423 KPSLVSSILDWLGDNRDVEEVEAFVS 448
+ +L+ L + E ++
Sbjct: 671 SFTTCGKVLNCLCVTHRLSEAVVIIN 696
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 120/268 (44%), Gaps = 9/268 (3%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +L+N +G ++ ++++ + E G S + YN ++ + G + ++ DM
Sbjct: 359 YSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMM 418
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E+G PD ++Y + +N LS +L + ++ I D T++T+ + Y
Sbjct: 419 EHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIP-DIFTFNTLIDGYCKQRNM 477
Query: 260 EKAIIYLKKCEDIVSK--SKDALGYNHLISHYASLGNKDEMM-KFWGLQKIKCKKQLNRD 316
+KAI L + ++S + D + YN L++ D ++ F + + C +
Sbjct: 478 DKAIEIL---DTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNI-IT 533
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y ++ S K ++ EA ++ +E + D ++ G G ++KA + I
Sbjct: 534 YNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIE 593
Query: 377 KKGKTPTPNS-WSIIAAGYADKNNMEKA 403
K+ K + ++I+ + +K N+ A
Sbjct: 594 KEYKFSYSTAIFNIMINAFCEKLNVSMA 621
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 72/389 (18%), Positives = 152/389 (39%), Gaps = 38/389 (9%)
Query: 39 LYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQ 98
L+ + + D + +D +LEG I ++R + + + A+ V E M
Sbjct: 52 LHGKFEAMEDVLAEMRKNVDSKMLEGVYIG------IMRDYGRKGKVQEAVNVFERMDFY 105
Query: 99 GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGAL--LNCYVREGLVDES 156
SV + ++++ + A + + D +Y + + G +
Sbjct: 106 DCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAA 165
Query: 157 LSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINS 216
L L+ M G +A++Y ++ + + + +M + G+ PD ++ I+
Sbjct: 166 LRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHV 225
Query: 217 YGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYI-IAGLKEKAII--YLKKCEDIV 273
+ + E + ++ M G + + I I GL K I + E IV
Sbjct: 226 LCKKGNVQESEKLFSKV-------MKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIV 278
Query: 274 SK--SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC--KKQLNR-------DYITMLG 322
S+ + D + YN LI + K L + +C K +N Y T++
Sbjct: 279 SEGLTPDVISYNTLICGFC---------KHSKLVEAECYLHKMVNSGVEPNEFTYNTIIN 329
Query: 323 SLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTP 382
K G ++ A+K+L + + D + ++ G G + +A AV E ++KG
Sbjct: 330 GFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKH 389
Query: 383 TPNSWSIIAAGYADKNNMEKAFECMKEAL 411
+ ++ + G + + + +A + MK+ +
Sbjct: 390 SIILYNTLVKGLSKQGLVLQALQLMKDMM 418
>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 106/461 (22%), Positives = 199/461 (43%), Gaps = 42/461 (9%)
Query: 43 ISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAF 102
+S P S +L++W Q + + ++R+L +R ++ ALQ EWM Q
Sbjct: 139 LSAPSTPLNSTALLLEKW--SHQLVGLEDFPYLLRELGNRGEWERALQGYEWMVQQ---- 192
Query: 103 SVHDHA-------VQLDLIGKVRGLESAETYFNSLNDEDKVDKLYG--ALLNCYVREGLV 153
VH + + + +G++ +E A FN + +Y A+++ Y R G
Sbjct: 193 -VHLRSEWSKLASIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRC 251
Query: 154 DESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP-DVLLDMKENGVPPDNFSYR- 211
E+L + Q MK+ G + + YN I+ G K D+ +M++ GV PD ++
Sbjct: 252 REALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKQALDIFDEMQKEGVEPDRITFNS 311
Query: 212 -ICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA--IIYLKK 268
I + S G E S + V EM+ + I D T++T+ + G E A I+ +
Sbjct: 312 LIAVCSRGGLWEDS--QRVFAEMQRRG-IEQDIFTFNTLIDAVCKGGQMELAASIMTTMR 368
Query: 269 CEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIG 328
++I S + + Y+ +I Y LG +E + + K + Y T++ K+G
Sbjct: 369 GKNI---SPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLG 425
Query: 329 ELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWS 388
++A ++ E D N ++ Y ++G + A + ++ +G P ++S
Sbjct: 426 RFDDALIACKDMERVGLKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYS 485
Query: 389 IIAAGYADKN---NMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEA 445
+ Y+ ++ F K A +P L SS++D VE+
Sbjct: 486 ALIDSYSKAGMHQDVSNVFTEFKRA--------GLKPDVVLYSSLIDSCCKCGLVEDAVV 537
Query: 446 FVSSLKIKVQKRNM--YHALTEAHIRSGQEVDGLLESMKAD 484
+ + + N+ Y++L +A+ R GQ LE++KA+
Sbjct: 538 LLQEMTQAGIQPNIVTYNSLIDAYGRYGQADK--LEAVKAN 576
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/314 (17%), Positives = 123/314 (39%), Gaps = 38/314 (12%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +++ Y + G +E++SL MKE G ++YN ++ +Y G+ + DM+
Sbjct: 379 YSTMIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDME 438
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G+ D +Y I++YG + + + +M+ + + + TYS + + Y AG+
Sbjct: 439 RVGLKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVP-NVLTYSALIDSYSKAGMH 497
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
+ +++ + + G K +++ Y +
Sbjct: 498 QDV--------------------SNVFTEFKRAGLKPDVVL----------------YSS 521
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
++ S K G +E+A +L+E + + N ++ Y + G +K +AV +
Sbjct: 522 LIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRYGQADKLEAVKANMPNSV 581
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKF-WRPKPSLVSSILDWLGDNR 438
+ S ++ + N + HE +F +P S+IL+
Sbjct: 582 QKIGERSMEVVRKPPPSQQNASDHTGVLAAVSVFHEMQQFGLKPNVVTFSAILNACSRCA 641
Query: 439 DVEEVEAFVSSLKI 452
++E + ++
Sbjct: 642 SLQEASVLLEQMRF 655
>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 155/353 (43%), Gaps = 8/353 (2%)
Query: 63 EGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSV-HDHAVQLDLIGKVRGLE 121
EG + + +I + + AL+ + M GL SV H H + + + E
Sbjct: 367 EGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEE 426
Query: 122 SAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCL 181
+ + + S + +L+ ++G +D++ L++KM+ G + ++YN +M
Sbjct: 427 ALKLFDESFETGLANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLA 486
Query: 182 YTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISM 241
+ + V +M E G+ P+N++Y I I+ + ++ V+ +M S S+I +
Sbjct: 487 HCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTS-SNIEV 545
Query: 242 DWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKF 301
+ Y T+ N G KA L + + YN +I + G D +
Sbjct: 546 NGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAA 605
Query: 302 WGLQKIKCKKQLNRDYIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLG 358
+ + C ++ + IT ++ L K +++A +M +E + D ++ G
Sbjct: 606 Y---EEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHG 662
Query: 359 YSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
+ +K +E A A+ E++++G P+ ++ + +G+ + NM A + K+ L
Sbjct: 663 FCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKML 715
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 127/278 (45%), Gaps = 11/278 (3%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFG-SALNYNGIMCLYTNTGQHEKIPDVLLD 197
+Y ++N + G ++ L+ M E F S ++YN I+ + G+ + +
Sbjct: 549 VYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEE 608
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYII-A 256
M NG+ P+ +Y ++ + + + EM+++ + +D Y + + + +
Sbjct: 609 MCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKG-VKLDIPAYGALIHGFCKKS 667
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
++ + ++ + E+ ++ S+ YN LIS + +LGN M+ L K K L D
Sbjct: 668 NMESASALFSELLEEGLNPSQPV--YNSLISGFRNLGN---MVAALDLYKKMLKDGLRCD 722
Query: 317 ---YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
Y T++ L+K G L A + E + D + +I+ G S+KG K + +
Sbjct: 723 LGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFE 782
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
E+ K TP ++ + AG+ + N+++AF E L
Sbjct: 783 EMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEML 820
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 125/279 (44%), Gaps = 18/279 (6%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+Y L+ ++++ +++ ++++M+E G YN ++ + + ++ LL+M
Sbjct: 457 IYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEM 516
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
ENG PD F+Y I+ Y E +S + ++EM ++ G + N + GL
Sbjct: 517 VENGFKPDAFTYGAFISGYIEAGEFASADKYVKEM-------LECG---VIPNKVLCTGL 566
Query: 259 ------KEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCK 310
K K I +V + DA Y L++ G ++ + + + K
Sbjct: 567 INEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGI 626
Query: 311 KQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADA 370
Y T++ K+G +++A + +E + + + N++L G+ + G IEKA
Sbjct: 627 APDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKE 686
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
+L E+ KG P ++ I GY ++ +AF+ E
Sbjct: 687 LLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDE 725
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 138/335 (41%), Gaps = 15/335 (4%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
YG + G +D + +++++M G + + Y ++ + + VL +M+
Sbjct: 423 YGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMR 482
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E G+ PD F Y I ++ + L EM ++ D TY + YI AG
Sbjct: 483 EQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEM-VENGFKPDAFTYGAFISGYIEAGEF 541
Query: 260 EKAIIYLK---KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
A Y+K +C I +K + LI+ Y G E + + +
Sbjct: 542 ASADKYVKEMLECGVIPNK----VLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKT 597
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y ++ LVK G++ +AE++ E D ++ G+S+ G ++KA ++ E+V
Sbjct: 598 YTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMV 657
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGD 436
+ G T ++++ G+ +EKA E + E K + P +I+D
Sbjct: 658 QAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEM-----SGKGFPPNAVTYCTIIDGYCK 712
Query: 437 NRDVEEVEAFVSSLKIK--VQKRNMYHALTEAHIR 469
+ D+ E +K+K V +Y L + R
Sbjct: 713 SGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCR 747
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/409 (19%), Positives = 164/409 (40%), Gaps = 12/409 (2%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I + + + A M QG+ + V ++ + K + AE F+ + +
Sbjct: 566 LINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKG 625
Query: 135 KVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+ YG L++ + + G + ++ S+ +M + G + + YN ++ + +G+ EK
Sbjct: 626 IAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAK 685
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
++L +M G PP+ +Y I+ Y +L+ + EM+ + + D Y+T+ +
Sbjct: 686 ELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVP-DSFVYTTLVDG 744
Query: 253 YIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLG----NKDEMMKFWGLQKIK 308
E+AI + E + S +N LI+ G D + + K
Sbjct: 745 CCRLNDVERAITIFETNEKGCASSSAP--FNALINWVFKFGKTELTTDMINRLMDGSFDK 802
Query: 309 CKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKA 368
K + Y M+ L K G LE A+++ + + +L GY + G +
Sbjct: 803 FGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEM 862
Query: 369 DAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVS 428
+V E++ G P +S+I + + KA + + A + + + S
Sbjct: 863 FSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCR 922
Query: 429 SILDWLGDNRDVEEVEAFVSS---LKIKVQKRNMYHALTEAHIRSGQEV 474
++L ++E E V + LK + + E+ I S Q +
Sbjct: 923 ALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELINESCISSNQRM 971
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 8/209 (3%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
L L+N Y ++G V E+ S + M E G G A Y +M G+ ++ +M
Sbjct: 562 LCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEM 621
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
+ G+ PD FSY I+ + + ++ EM Q+ ++ + Y+ + + +G
Sbjct: 622 RGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEM-VQAGLTSNVIIYNMLLGGFCRSGE 680
Query: 259 KEKAIIYLKKCEDIVSK---SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR 315
EKA K+ D +S +A+ Y +I Y G+ E + + K+K +
Sbjct: 681 IEKA----KELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSF 736
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSC 344
Y T++ ++ ++E A + E E C
Sbjct: 737 VYTTLVDGCCRLNDVERAITIFETNEKGC 765
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 65/342 (19%), Positives = 138/342 (40%), Gaps = 14/342 (4%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I L +KR + A + M+ GL +++ +D + K R ++A + +
Sbjct: 286 LIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHG 345
Query: 135 -KVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+D + Y + +EG ++++ +L M G A Y ++ + K
Sbjct: 346 FSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGY 405
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
++L+++K+ + ++Y + + +L N+++EM S + Y+T+
Sbjct: 406 ELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEM-GASGCRPNVVIYTTLIKT 464
Query: 253 YIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQ 312
++ A+ LK+ + + D YN LI + DE F K
Sbjct: 465 FLQKSRFGDAVRVLKEMRE-QGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKP 523
Query: 313 LNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLG-----YSQKGMIEK 367
Y + ++ GE A+K ++E L C +PN +L Y +KG + +
Sbjct: 524 DAFTYGAFISGYIEAGEFASADKYVKEM-LECGV----IPNKVLCTGLINEYCKKGKVIE 578
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
A + + +V++G +++++ G + A E E
Sbjct: 579 ACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHE 620
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 106/256 (41%), Gaps = 12/256 (4%)
Query: 153 VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
VDE+L L + M G S +YN ++ + E +L++M G+ DN +Y I
Sbjct: 261 VDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSI 320
Query: 213 CINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCED- 271
I+ + ++ EM S S+D Y +Y+I KE A+ K D
Sbjct: 321 LIDGLLKGRNADAANGLVHEMVSHG-FSIDPMMY----DYFICVMSKEGAMEKAKALFDG 375
Query: 272 --IVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI--TMLGSLVKI 327
+ A Y LI + K+ + L +IK + + Y T + +
Sbjct: 376 MITFGVTPGARAYASLIEGF--FREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSS 433
Query: 328 GELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSW 387
G+L+ A +++E S + + ++ + QK A VLKE+ ++G P +
Sbjct: 434 GDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCY 493
Query: 388 SIIAAGYADKNNMEKA 403
+ + G + M++A
Sbjct: 494 NSLIIGLSKAKKMDEA 509
>gi|255660912|gb|ACU25625.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 481
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 89/431 (20%), Positives = 183/431 (42%), Gaps = 30/431 (6%)
Query: 79 LRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAETYFNSLN------ 131
L S K +HALQ W+ L + H ++++G+ L A +
Sbjct: 19 LHSAKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEW 78
Query: 132 DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
DED ++ +++ Y ++G+V ES+ L +M+E+G + +Y+ + + G++
Sbjct: 79 DED----MWVMMIDSYGKQGIVQESVKLFDRMEELGVERTIKSYDALFKVILRRGRYMMA 134
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
M G+ P ++ + I + ++ + ++M+S+ IS D TY+T+ N
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVLIWGFFLSGKVETANRFFEDMKSR-EISPDVVTYNTMIN 193
Query: 252 -YYIIAGLKEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
YY + + E +++ K +I + Y LI Y S+ D+ ++ K
Sbjct: 194 GYYRVKKMXEAEKYFVEMKGRNI---EPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFG 250
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEE-WELSCYCYDFRVPNIILLGYSQKGMIEKA 368
K Y T+L L ++ EA +L+E + D + ++ + G ++ A
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARSILKEMMDKYLAPTDNSIFMRLITSQCKSGHLDAA 310
Query: 369 DAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPK----- 423
VLK +++ + ++ + ++A + + + + E++ RP+
Sbjct: 311 SDVLKAMIRLSVPTEAGHYGVLIENFCKAGQYDQAVKLLDKVI---EKDIILRPQSTLHL 367
Query: 424 -PSLVSSILDWLGDNRDVEEVEAFVSS-LKIKVQKRNMYHALTEAHIRSGQEVDG--LLE 479
PS + ++++L +N + E V LK+ VQ + L H + G LL+
Sbjct: 368 EPSAYNPMIEYLCNNGQAAKAETLVRQLLKLGVQDPTALNTLIRGHSQEGSPDSAFELLK 427
Query: 480 SMKADDIDEDK 490
M +D +K
Sbjct: 428 IMLRRKVDSEK 438
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 137/328 (41%), Gaps = 54/328 (16%)
Query: 116 KVRGLESAETYFNSL---NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
+V+ + AE YF + N E V Y L+ YV VD++L L+++MK G +A
Sbjct: 197 RVKKMXEAEKYFVEMKGRNIEPTV-VTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNA 255
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP-DNFSYRICINSYGARSELSSMENVLQ 231
+ Y+ ++ N + + +L +M + + P DN + I S L + +VL+
Sbjct: 256 ITYSTLLPGLCNAEKMSEARSILKEMMDKYLAPTDNSIFMRLITSQCKSGHLDAASDVLK 315
Query: 232 EMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC--EDIVSKSKDAL-----GYNH 284
M S + + G Y + + AG ++A+ L K +DI+ + + L YN
Sbjct: 316 AMIRLS-VPTEAGHYGVLIENFCKAGQYDQAVKLLDKVIEKDIILRPQSTLHLEPSAYNP 374
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSC 344
+I + + G Q K + T++ L+K+G
Sbjct: 375 MIEYLCNNG-----------QAAKAE--------TLVRQLLKLG---------------- 399
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
D N ++ G+SQ+G + A +LK ++++ +++ + Y KN A
Sbjct: 400 -VQDPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKKNEPADA- 457
Query: 405 ECMKEALAVHEENKFWRPKPSLVSSILD 432
K AL EN P +L S+++
Sbjct: 458 ---KAALDSMIENDHL-PDSALFRSVME 481
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 121/269 (44%), Gaps = 10/269 (3%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+Y AL++ ++G V ++L L ++ E G A+ YN ++ + G+ +++ +L M
Sbjct: 197 MYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKM 256
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYII-AG 257
V PD++++ I I++ + + VL M + D TY+ + Y
Sbjct: 257 VRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGE-KPDIVTYNALMEGYCSREN 315
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN--- 314
+ E ++ + + D L YN LI Y DE M + K C K L
Sbjct: 316 VHEARELFNRMVKR--GLEPDVLNYNVLIDGYCKTKMVDEAMVLF---KELCNKNLVPTI 370
Query: 315 RDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
Y +++ L G + +K+L+E S D NI++ ++G I +A VL
Sbjct: 371 ASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVM 430
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
++KKG P +++ + GY +NN+ A
Sbjct: 431 MMKKGVKPNIVTYNAMMDGYCLRNNVNVA 459
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 149/344 (43%), Gaps = 17/344 (4%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ L+NCY + + SL+ + + G + + +N I+ + G K D ++
Sbjct: 93 FTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLL 152
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G D F+Y IN ++ + ++LQEME +S + + YS + + G
Sbjct: 153 AQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEME-KSSVQPNLVMYSALIDGLCKDGFV 211
Query: 260 EKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
A L C I + DA+ YN LI S+G E+ + L K+ + DY
Sbjct: 212 SDA---LGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQL--LTKMVRENVDPDDY 266
Query: 318 I--TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
++ +L K G + EA+ +L D N ++ GY + + +A + +
Sbjct: 267 TFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRM 326
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLG 435
VK+G P +++++ GY +++A KE NK P + +S++D L
Sbjct: 327 VKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELC-----NKNLVPTIASYNSLIDGLC 381
Query: 436 DNRDVEEVEAFVSSLKIKVQKRNM--YHALTEAHIRSGQEVDGL 477
++ + V+ + + Q ++ Y+ L +A + G+ ++ L
Sbjct: 382 NSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEAL 425
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/345 (20%), Positives = 143/345 (41%), Gaps = 21/345 (6%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
VL G+K + ++ SR+ A ++ M +GL V ++ V +D
Sbjct: 287 VLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYC 346
Query: 116 KVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
K + ++ A F L +++ V + Y +L++ G + L+ +M +
Sbjct: 347 KTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVV 406
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
YN ++ G+ + VL+ M + GV P+ +Y ++ Y R+ ++ +++ M
Sbjct: 407 TYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRM 466
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLG 293
+S + D Y+ + N Y + ++AI+ K+ + D YN LI +LG
Sbjct: 467 -VKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRH-KNLIPDIASYNSLIDGLCNLG 524
Query: 294 NKDEMMKFWGLQKIKCKKQLNRDYIT---MLGSLVKIGELEEAEKMLEE-----WELSCY 345
+ + L C + D IT +L + K ++A + + W
Sbjct: 525 RIPHVQE---LLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWP---- 577
Query: 346 CYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSII 390
DF + I+ + ++ A+ LK ++ G +P +++I+
Sbjct: 578 --DFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTIL 620
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 121/279 (43%), Gaps = 15/279 (5%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM---CLYTNTGQHEKIPDVLL 196
Y L++ +EG + E+L ++ M + G + + YN +M CL N + D+
Sbjct: 408 YNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAK---DIFN 464
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
M ++G+ PD +Y + IN Y + + +EM ++ I D +Y+++ +
Sbjct: 465 RMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIP-DIASYNSLIDGLCNL 523
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
G L + D +S D + YN L+ + D+ + + + + + D
Sbjct: 524 GRIPHVQELLDEMCD-SGQSPDVITYNILLDAFCKTQPFDKAISLFR----QIVEGIWPD 578
Query: 317 YIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
+ T ++ +L K +L+ AE L+ + + + I++ + G +A +L
Sbjct: 579 FYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLS 638
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
++ + P ++ II +N +KA + +E +A
Sbjct: 639 KMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIA 677
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 122/293 (41%), Gaps = 17/293 (5%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
+LD+ Q + +I L R AL V M +G+ ++ + +D
Sbjct: 392 LLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYC 451
Query: 116 KVRGLESAETYFNSLNDED-KVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
+ A+ FN + + D L Y L+N Y + +VDE++ L ++M+
Sbjct: 452 LRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIA 511
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
+YN ++ N G+ + ++L +M ++G PD +Y I ++++ ++ +++
Sbjct: 512 SYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI 571
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK------SKDALGYNHLIS 287
+ W + T N+ I+ L + LK ED + S + Y LI+
Sbjct: 572 -----VEGIWPDFYT--NHAIVDNLCKGE--KLKMAEDALKHLLMHGCSPNVQTYTILIN 622
Query: 288 HYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEW 340
G+ E M + + + ++G L++ E ++AEK+ EE
Sbjct: 623 ALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEM 675
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 90/420 (21%), Positives = 182/420 (43%), Gaps = 23/420 (5%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE- 133
+I L + AL+V + M GL ++ + +D + K + L+ A + F L+ +
Sbjct: 418 LIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKV 477
Query: 134 -DKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+ + +L++ R G VD++ SL +KM + + + Y ++ + G+ E
Sbjct: 478 CSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGH 537
Query: 193 DVLLDMKENGVPPDNF---SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTV 249
+ +M G PD SY C+ G E+ + +E+++Q + D +YS +
Sbjct: 538 KIYKEMVHRGCSPDLMLLNSYMDCVFKAG---EVEKGRALFEEIKAQGLVP-DVRSYSIL 593
Query: 250 ANYYIIAGLKEKA--IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKI 307
+ + AG + + Y K + + D L YN +I + G D+ + K
Sbjct: 594 IHGLVKAGFSRETYKLFYEMKEQGL---HLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKT 650
Query: 308 KCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEK 367
K + Y +++ L KI L+EA + EE + + + + ++ G+ + G I++
Sbjct: 651 KGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDE 710
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLV 427
A +L+E+++KG TP +W+ + +++A C + + +N P
Sbjct: 711 AYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQ-----NMKNLKCSPNAMTY 765
Query: 428 SSILDWLGDNRDVEEVEAFVSSLKIKVQKRN--MYHALTEAHIRSGQ--EVDGLLESMKA 483
S +++ L R + F ++ + K N Y + ++G E GL + KA
Sbjct: 766 SIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKA 825
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 138/325 (42%), Gaps = 10/325 (3%)
Query: 154 DESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRIC 213
D L+L +M+E+G + + ++ ++ G+ + +L +MK N D Y +C
Sbjct: 220 DPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVC 279
Query: 214 INSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIV 273
I+ +G ++ EM++Q + D TY+T+ A ++A+ ++ D+
Sbjct: 280 IDCFGKVGKVDMAWKFFHEMKAQGLVPDDV-TYTTLIGVLCKARRLDEAVELFEEL-DLN 337
Query: 274 SKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEA 333
YN +I Y S G DE QK K Y +L L + G++EEA
Sbjct: 338 RSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEA 397
Query: 334 EKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAG 393
++ +E + NI++ + G +E A V + + G P + +I+
Sbjct: 398 LRIHDEMRQDA-APNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDR 456
Query: 394 YADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK 453
+++A C ++ + ++K P S++D LG V++ + +
Sbjct: 457 LCKAQKLDEA--C---SIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDS 511
Query: 454 VQKRN--MYHALTEAHIRSGQEVDG 476
Q N +Y +L + + G++ DG
Sbjct: 512 DQIPNVVVYTSLIQNFFKCGRKEDG 536
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 83/404 (20%), Positives = 174/404 (43%), Gaps = 23/404 (5%)
Query: 81 SRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL- 139
S +F A + E +G SV + L +G+ +E A + + +D L
Sbjct: 355 SAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMR-QDAAPNLT 413
Query: 140 -YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
Y L++ + G ++ +L + MKE G F + + N ++ + ++ + L +
Sbjct: 414 TYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGL 473
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
PD+ ++ I+ G R + ++ ++M I + Y+++ + G
Sbjct: 474 DHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIP-NVVVYTSLIQNFFKCGR 532
Query: 259 KEKA-IIYLKKCEDIVSK--SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN- 314
KE IY +++V + S D + N + G ++ + ++IK + +
Sbjct: 533 KEDGHKIY----KEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALF--EEIKAQGLVPD 586
Query: 315 -RDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
R Y ++ LVK G E K+ E + D N ++ G+ + G ++KA +L+
Sbjct: 587 VRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLE 646
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDW 433
E+ KG PT ++ + G A + +++A+ +EA ++ + + SS++D
Sbjct: 647 EMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNV-----VIYSSLIDG 701
Query: 434 LGDNRDVEEVEAFVSSLKIKVQKRNMY--HALTEAHIRSGQEVD 475
G ++E + L K N Y + L +A +++ +E+D
Sbjct: 702 FGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKA-EEID 744
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 129/329 (39%), Gaps = 37/329 (11%)
Query: 111 LDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGS 168
+D + K +E F + + V + Y L++ V+ G E+ L +MKE G
Sbjct: 559 MDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGL 618
Query: 169 FGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMEN 228
L YN ++ + +G+ +K +L +MK G+ P +Y ++ L
Sbjct: 619 HLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYM 678
Query: 229 VLQEMESQSHISMDWGTYSTVAN-----------YYIIAGLKEKAII-----------YL 266
+ +E +S + ++ YS++ + Y I+ L +K + L
Sbjct: 679 LFEEAKSIG-VDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDAL 737
Query: 267 KKCEDI------------VSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN 314
K E+I + S +A+ Y+ +I+ + ++ FW + + K N
Sbjct: 738 VKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNN 797
Query: 315 RDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
Y TM+ L K G + EA + + ++ S D N ++ G S A V +E
Sbjct: 798 ITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEE 857
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
KG + ++ + +E+A
Sbjct: 858 TRLKGCRVNSKTCVVLLDALHKADCLEQA 886
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 159/378 (42%), Gaps = 31/378 (8%)
Query: 74 RVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE 133
++ Q+++ FKH L+ + M +L L GK +E D
Sbjct: 25 KMFNQVKTEDGFKHTLETYKCM------------IEKLGLHGKFEAMEDVLAEMRKNVDS 72
Query: 134 DKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPD 193
++ +Y ++ Y R+G V E++++ ++M S +YN IM + G +
Sbjct: 73 KMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHK 132
Query: 194 VLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYY 253
V + MK+ G+ PD +++ I + S+ ++ +L M Q ++ V+
Sbjct: 133 VYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQG------CEFNAVSYCA 186
Query: 254 IIAGL-KEKAIIYLKKCEDIVSK---SKDALGYNHLISHYASLGNKDEMMKFWG--LQKI 307
+I+G KE I D + K D L +N LI GN E K + +++
Sbjct: 187 VISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRG 246
Query: 308 KCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEK 367
C + + L + G ++EA ++LE D N ++ G+ + + +
Sbjct: 247 VCPNLFT--FNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVE 304
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLV 427
A+ L ++V G P +++ I G+ M+ A + +++A+ K + P
Sbjct: 305 AECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMF-----KGFIPDEFTY 359
Query: 428 SSILDWLGDNRDVEEVEA 445
SS+++ L ++ D+ A
Sbjct: 360 SSLINGLCNDGDMNRAMA 377
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/326 (20%), Positives = 130/326 (39%), Gaps = 38/326 (11%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
LY L+ ++GLV ++L LM+ M E G YN ++ G +L D
Sbjct: 393 LYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDA 452
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
G PD F++ I+ Y + + +L M S I+ D TY+T+ N
Sbjct: 453 IAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHG-ITPDVITYNTLLN------- 504
Query: 259 KEKAIIYLKKCEDIVSKSK---------DALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
+ +K +++V K + + YN LI + E M+ + K
Sbjct: 505 ---GLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMK--- 558
Query: 310 KKQLNRDYI---TMLGSLVKIGELEEAEKML----EEWELSCYCYDFRVPNIILLGYSQK 362
+ L D + T++ L GEL++A ++ +E++ S Y + NI++ + K
Sbjct: 559 TRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFS---YSTAIFNIMINAFCXK 615
Query: 363 GMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRP 422
+ A+ + ++ P ++ ++ Y N++ A + E ++ K P
Sbjct: 616 LNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENIS-----KGLVP 670
Query: 423 KPSLVSSILDWLGDNRDVEEVEAFVS 448
+ +L+ L + E ++
Sbjct: 671 SFTTCGKVLNCLCVTHRLSEAVVIIN 696
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 119/268 (44%), Gaps = 9/268 (3%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +L+N +G ++ ++++ + E G S + YN ++ + G + ++ DM
Sbjct: 359 YSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMM 418
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E+G PD ++Y + +N LS +L + ++ I D T++T+ + Y
Sbjct: 419 EHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIP-DIFTFNTLIDGYCKQRNM 477
Query: 260 EKAIIYLKKCEDIVSK--SKDALGYNHLISHYASLGNKDEMM-KFWGLQKIKCKKQLNRD 316
+KAI L + ++S + D + YN L++ D ++ F + + C +
Sbjct: 478 DKAIEIL---DTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNI-IT 533
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y ++ S K ++ EA ++ +E + D ++ G G ++KA + I
Sbjct: 534 YNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIE 593
Query: 377 KKGKTPTPNS-WSIIAAGYADKNNMEKA 403
K+ K + ++I+ + K N+ A
Sbjct: 594 KEYKFSYSTAIFNIMINAFCXKLNVSMA 621
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 72/389 (18%), Positives = 152/389 (39%), Gaps = 38/389 (9%)
Query: 39 LYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQ 98
L+ + + D + +D +LEG I ++R + + + A+ V E M
Sbjct: 52 LHGKFEAMEDVLAEMRKNVDSKMLEGVYIG------IMRDYGRKGKVQEAVNVFERMDFY 105
Query: 99 GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGAL--LNCYVREGLVDES 156
SV + ++++ + A + + D +Y + + G +
Sbjct: 106 DCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAA 165
Query: 157 LSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINS 216
L L+ M G +A++Y ++ + + + +M + G+ PD ++ I+
Sbjct: 166 LRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHV 225
Query: 217 YGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYI-IAGLKEKAII--YLKKCEDIV 273
+ + E + ++ M G + + I I GL K I + E IV
Sbjct: 226 LCKKGNVQESEKLFSKV-------MKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIV 278
Query: 274 SK--SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC--KKQLNR-------DYITMLG 322
S+ + D + YN LI + K L + +C K +N Y T++
Sbjct: 279 SEGLTPDVISYNTLICGFC---------KHSKLVEAECYLHKMVNSGVEPNEFTYNTIIN 329
Query: 323 SLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTP 382
K G ++ A+K+L + + D + ++ G G + +A AV E ++KG
Sbjct: 330 GFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKH 389
Query: 383 TPNSWSIIAAGYADKNNMEKAFECMKEAL 411
+ ++ + G + + + +A + MK+ +
Sbjct: 390 SIILYNTLVKGLSKQGLVLQALQLMKDMM 418
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 121/270 (44%), Gaps = 12/270 (4%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+Y AL++ ++G V ++L L ++ E G A+ YN ++ + G+ +++ +L M
Sbjct: 197 MYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKM 256
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
V PD++++ I I++ + + VL M + D TY+ + Y
Sbjct: 257 VRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGE-KPDIVTYNALMEGYCSREN 315
Query: 259 KEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN-- 314
+A + +V + D L YN LI Y DE M + K C K L
Sbjct: 316 VHEARELFNR---MVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLF---KELCNKNLVPT 369
Query: 315 -RDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
Y +++ L G + +K+L+E S D NI++ ++G I +A VL
Sbjct: 370 IASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLV 429
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
++KKG P +++ + GY +NN+ A
Sbjct: 430 MMMKKGVKPNIVTYNAMMDGYCLRNNVNVA 459
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 149/344 (43%), Gaps = 17/344 (4%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ L+NCY + + SL+ + + G + + +N I+ + G K D ++
Sbjct: 93 FTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLL 152
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G D F+Y IN ++ + ++LQEME +S + + YS + + G
Sbjct: 153 AQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEME-KSSVQPNLVMYSALIDGLCKDGFV 211
Query: 260 EKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
A L C I + DA+ YN LI S+G E+ + L K+ + DY
Sbjct: 212 SDA---LGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQL--LTKMVRENVDPDDY 266
Query: 318 I--TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
++ +L K G + EA+ +L D N ++ GY + + +A + +
Sbjct: 267 TFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRM 326
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLG 435
VK+G P +++++ GY +++A KE NK P + +S++D L
Sbjct: 327 VKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELC-----NKNLVPTIASYNSLIDGLC 381
Query: 436 DNRDVEEVEAFVSSLKIKVQKRNM--YHALTEAHIRSGQEVDGL 477
++ + V+ + + Q ++ Y+ L +A + G+ ++ L
Sbjct: 382 NSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEAL 425
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 69/345 (20%), Positives = 143/345 (41%), Gaps = 21/345 (6%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
VL G+K + ++ SR+ A ++ M +GL V ++ V +D
Sbjct: 287 VLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYC 346
Query: 116 KVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
K + ++ A F L +++ V + Y +L++ G + L+ +M +
Sbjct: 347 KTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVV 406
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
YN ++ G+ + VL+ M + GV P+ +Y ++ Y R+ ++ +++ M
Sbjct: 407 TYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRM 466
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLG 293
+S + D Y+ + N Y + ++AI+ K+ + D YN LI +LG
Sbjct: 467 -VKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRH-KNLIPDIASYNSLIDGLCNLG 524
Query: 294 NKDEMMKFWGLQKIKCKKQLNRDYIT---MLGSLVKIGELEEAEKMLEE-----WELSCY 345
+ + L C + D IT +L + K ++A + + W
Sbjct: 525 RIPHVQE---LLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWP---- 577
Query: 346 CYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSII 390
DF + I+ + ++ A+ LK ++ G +P +++I+
Sbjct: 578 --DFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTIL 620
Score = 44.7 bits (104), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 121/279 (43%), Gaps = 15/279 (5%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM---CLYTNTGQHEKIPDVLL 196
Y L++ +EG + E+L ++ M + G + + YN +M CL N + D+
Sbjct: 408 YNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAK---DIFN 464
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
M ++G+ PD +Y + IN Y + + +EM ++ I D +Y+++ +
Sbjct: 465 RMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIP-DIASYNSLIDGLCNL 523
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
G L + D +S D + YN L+ + D+ + + + + + D
Sbjct: 524 GRIPHVQELLDEMCD-SGQSPDVITYNILLDAFCKTQPFDKAISLFR----QIVEGIWPD 578
Query: 317 YIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
+ T ++ +L K +L+ AE L+ + + + I++ + G +A +L
Sbjct: 579 FYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLS 638
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
++ + P ++ II +N +KA + +E +A
Sbjct: 639 KMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIA 677
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 122/293 (41%), Gaps = 17/293 (5%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
+LD+ Q + +I L R AL V M +G+ ++ + +D
Sbjct: 392 LLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYC 451
Query: 116 KVRGLESAETYFNSLNDED-KVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
+ A+ FN + + D L Y L+N Y + +VDE++ L ++M+
Sbjct: 452 LRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIA 511
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
+YN ++ N G+ + ++L +M ++G PD +Y I ++++ ++ +++
Sbjct: 512 SYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI 571
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK------SKDALGYNHLIS 287
+ W + T N+ I+ L + LK ED + S + Y LI+
Sbjct: 572 -----VEGIWPDFYT--NHAIVDNLCKGE--KLKMAEDALKHLLMHGCSPNVQTYTILIN 622
Query: 288 HYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEW 340
G+ E M + + + ++G L++ E ++AEK+ EE
Sbjct: 623 ALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEM 675
>gi|255660870|gb|ACU25604.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 476
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 92/432 (21%), Positives = 185/432 (42%), Gaps = 32/432 (7%)
Query: 79 LRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAETYFNSLN------ 131
L S K +HA W+ L + H ++++G+ L A +
Sbjct: 11 LHSSKTSEHAFHFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEW 70
Query: 132 DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
DED ++ +++ Y +EG+V ES+ + QKM+E+G + +YN + + G++
Sbjct: 71 DED----MWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMG 126
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
M G+ P ++ + I + ++ + ++M+S+ IS D TY+T+ N
Sbjct: 127 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAIRFFEDMKSRE-ISPDVVTYNTMIN 185
Query: 252 -YYIIAGLKEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
YY + ++E +++ K +I + Y LI Y S+ D+ ++ K
Sbjct: 186 GYYRVKKMEEAEKYFVEMKGRNI---EPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFG 242
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYC--YDFRVPNIILLGYSQKGMIEK 367
K Y T+L L ++ EA +L+E + Y D + ++ + + G ++
Sbjct: 243 TKPNAITYSTLLPGLCNAEKMSEARVILKEM-MDKYLAPTDNSIFMRLISSHCKSGNLDA 301
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPK---- 423
A VLK +++ + ++ + +KA + + + + E++ RP+
Sbjct: 302 AADVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKAVKLLDKLI---EKDIMLRPQSTLH 358
Query: 424 --PSLVSSILDWLGDNRDVEEVEAFVSSL-KIKVQKRNMYHALTEAHIRSGQEVDG--LL 478
PS + ++++L +N + E V L K+ VQ + L H + G LL
Sbjct: 359 LEPSAHNPMIEYLCNNGQASKAETLVRQLMKLGVQDPTALNTLIRGHSQEGSPDSAFELL 418
Query: 479 ESMKADDIDEDK 490
+ M +D +K
Sbjct: 419 KIMLRRKVDSEK 430
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 155/358 (43%), Gaps = 54/358 (15%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSL---NDEDKVDKLYGALL 144
A++ E M + ++ V + ++ +V+ +E AE YF + N E V Y L+
Sbjct: 161 AIRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTV-VTYTTLI 219
Query: 145 NCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVP 204
YV VD++L L+++MK G+ +A+ Y+ ++ N + + +L +M + +
Sbjct: 220 KGYVSVDQVDDALRLVEEMKGFGTKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLA 279
Query: 205 P-DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAI 263
P DN + I+S+ L + +VL+ M S + + G Y + + AG +KA+
Sbjct: 280 PTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLS-VPTEAGHYGLLIENFCKAGQYDKAV 338
Query: 264 IYLKKC--EDIVSKSKDAL-----GYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
L K +DI+ + + L +N +I + + G Q K +
Sbjct: 339 KLLDKLIEKDIMLRPQSTLHLEPSAHNPMIEYLCNNG-----------QASKAE------ 381
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
T++ L+K+G D N ++ G+SQ+G + A +LK ++
Sbjct: 382 --TLVRQLMKLG-----------------VQDPTALNTLIRGHSQEGSPDSAFELLKIML 422
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWL 434
++ ++++ + Y KN A K AL EN P +L S+++ L
Sbjct: 423 RRKVDSEKSAYNSLVQSYLKKNEPXDA----KAALDSMIENDHL-PDSALFRSVMESL 475
>gi|302776756|ref|XP_002971525.1| hypothetical protein SELMODRAFT_95815 [Selaginella moellendorffii]
gi|300160657|gb|EFJ27274.1| hypothetical protein SELMODRAFT_95815 [Selaginella moellendorffii]
Length = 356
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 123/254 (48%), Gaps = 12/254 (4%)
Query: 165 EMGSFGSAL---NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARS 221
E+ S G AL +YN ++C +T G +K+ +V+ +M + PD FS+ I +Y
Sbjct: 88 EIKSRGVALTLRSYNVVICAFTKEGSIDKVEEVIREMIRQELRPDLFSFNALIAAYAMSR 147
Query: 222 ELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSK-DAL 280
+ V M++ + D TY+T+ + + + ++AI + E +V+K + D
Sbjct: 148 KPERGLQVFSNMKAAGVLP-DIVTYTTLIQMFSRSAMHKEAIEMFE--EMVVNKCQPDFF 204
Query: 281 GYNHLISHYASLG-NKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEE 339
Y+ L+S Y G D ++ F LQ ++ + Y +++ + + G LEE+ K +
Sbjct: 205 VYSLLVSVYGKAGLVADALLIFHRLQ-LEGHRPNIVTYTSLISAHLHKGLLEESRKHFSQ 263
Query: 340 WELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNN 399
E D + N ++ Y++ GM+ A +L + +G P S++II G+ +
Sbjct: 264 MEAYGCRADVHLLNTMIDAYAKAGMVNDAANLLHRLTAQGVCPNRASYAIIVEGFLHAGH 323
Query: 400 MEK---AFECMKEA 410
+++ A+ M EA
Sbjct: 324 VDEALAAYASMSEA 337
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/267 (19%), Positives = 118/267 (44%), Gaps = 17/267 (6%)
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
+L R L++++ L Q +K + + YN ++ Y + + DV M G
Sbjct: 2 VLGILSRARLIEDAEELFQWIK-LQDWDKLRPYNAMIAAYYQAKRPKDAWDVYYQMLAEG 60
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
+ PD+ +Y I ++ G ++ + E++S+ +++ +Y+ V I A KE +
Sbjct: 61 IDPDDVTYDILVSGSGKNG--YPIDRLFLEIKSRG-VALTLRSYNVV----ICAFTKEGS 113
Query: 263 IIYLKKCEDIVSK------SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
I K E+++ + D +N LI+ YA + ++ + K
Sbjct: 114 I---DKVEEVIREMIRQELRPDLFSFNALIAAYAMSRKPERGLQVFSNMKAAGVLPDIVT 170
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y T++ + +EA +M EE ++ DF V ++++ Y + G++ A + +
Sbjct: 171 YTTLIQMFSRSAMHKEAIEMFEEMVVNKCQPDFFVYSLLVSVYGKAGLVADALLIFHRLQ 230
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKA 403
+G P +++ + + + K +E++
Sbjct: 231 LEGHRPNIVTYTSLISAHLHKGLLEES 257
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/154 (19%), Positives = 69/154 (44%), Gaps = 2/154 (1%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ AL+ Y + L + MK G + Y ++ +++ + H++ ++ +M
Sbjct: 136 FNALIAAYAMSRKPERGLQVFSNMKAAGVLPDIVTYTTLIQMFSRSAMHKEAIEMFEEMV 195
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
N PD F Y + ++ YG ++ + ++ + H + TY+++ + ++ GL
Sbjct: 196 VNKCQPDFFVYSLLVSVYGKAGLVADALLIFHRLQLEGH-RPNIVTYTSLISAHLHKGLL 254
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLG 293
E++ + + E ++ D N +I YA G
Sbjct: 255 EESRKHFSQMEAYGCRA-DVHLLNTMIDAYAKAG 287
>gi|168047776|ref|XP_001776345.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672305|gb|EDQ58844.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 503
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 138/348 (39%), Gaps = 51/348 (14%)
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YG 141
R K AL ++ M + F+V + + +D G+V LE AE + + + Y
Sbjct: 189 RLKEALLITTEMEKLNVPFNVVIYNILIDAYGRVGQLEEAEGLMTEMRERGIQPNVGTYN 248
Query: 142 ALLNCYV-----REGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
AL+ Y+ R+ +V E L +++M+ G + + + ++ Y + G E+ V
Sbjct: 249 ALITGYLEAKPKRQFVVAEGL--IEEMEASGLYPDVVTFTMLLGAYGHEGLTEQAEQVFN 306
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
MK GV P+++SY IN+Y R + + Q G TV Y
Sbjct: 307 RMKARGVQPNSYSYTALINAYAERRCPEKAARAFEMIRKQ-------GVNPTVETY---- 355
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
L+ Y G+ + + W K++
Sbjct: 356 --------------------------TALLDAYRRAGDLEMVQAVWKSMKVEGCVATRVT 389
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y+T+L + K G +EA ++EE++ + D V N++L Y + G KA +L E+
Sbjct: 390 YMTILDAFQKQGRYKEARDLIEEFKNQGHKPDLMVYNMLLNSYMRGGRHVKASDILLEMK 449
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKP 424
G P ++ + G+ + KA + +E + N+ P P
Sbjct: 450 TAGFLPDSFTYCTLIYGFLRVRDQTKALKYHREMM-----NRGQLPDP 492
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 4/146 (2%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I R+ + A + E + QG+ +V + LD + LE + + S+ E
Sbjct: 323 LINAYAERRCPEKAARAFEMIRKQGVNPTVETYTALLDAYRRAGDLEMVQAVWKSMKVEG 382
Query: 135 KVDK--LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
V Y +L+ + ++G E+ L+++ K G + YN ++ Y G+H K
Sbjct: 383 CVATRVTYMTILDAFQKQGRYKEARDLIEEFKNQGHKPDLMVYNMLLNSYMRGGRHVKAS 442
Query: 193 DVLLDMKENGVPPDNFSYRICINSYG 218
D+LL+MK G PD+F+Y C YG
Sbjct: 443 DILLEMKTAGFLPDSFTY--CTLIYG 466
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 52/273 (19%), Positives = 116/273 (42%), Gaps = 4/273 (1%)
Query: 140 YGALLNCYVREG-LVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+ L+N V+ G + E +L Q M + G S + + + + G+ ++ + +M
Sbjct: 141 FSVLMNSAVKGGGSLKEVWALYQDMVQRGISPSVSVFGTFIKAFCDAGRLKEALLITTEM 200
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
++ VP + Y I I++YG +L E ++ EM + I + GTY+ + Y+ A
Sbjct: 201 EKLNVPFNVVIYNILIDAYGRVGQLEEAEGLMTEMRERG-IQPNVGTYNALITGYLEAKP 259
Query: 259 KEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
K + ++ E++ + D + + L+ Y G ++ + + K + + +
Sbjct: 260 KRQFVVAEGLIEEMEASGLYPDVVTFTMLLGAYGHEGLTEQAEQVFNRMKARGVQPNSYS 319
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y ++ + + E+A + E +L Y + G +E AV K +
Sbjct: 320 YTALINAYAERRCPEKAARAFEMIRKQGVNPTVETYTALLDAYRRAGDLEMVQAVWKSMK 379
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
+G T ++ I + + ++A + ++E
Sbjct: 380 VEGCVATRVTYMTILDAFQKQGRYKEARDLIEE 412
>gi|357487731|ref|XP_003614153.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515488|gb|AES97111.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 691
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 158/326 (48%), Gaps = 26/326 (7%)
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGL----ESAETYFNSLNDEDKV--D 137
R+K A +V E M G+ + DH +I +R L + A +F +N +
Sbjct: 263 RYKDAWKVYESMETDGV---LPDHVTCSIMIIGMRKLGHSAKDAWQFFEKMNQKGVRWGK 319
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
+ +GAL+ + EGL+ E+L + +M++ G +A+ YN +M Y + + E+ + ++
Sbjct: 320 EAFGALIKSFCVEGLLSEALIIQSEMEKKGISSNAIVYNTLMDAYCKSNRVEEAEGLFVE 379
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYY---- 253
MK G+ P ++ I + +Y R + +E++L EM+ + + +Y+ + + Y
Sbjct: 380 MKAKGIKPTAVTFNILMYAYSRRMQPKIVESLLAEMKDFG-LKPNANSYTCLISAYGRQK 438
Query: 254 IIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLG-NKDEMMKFWGLQKIKCKKQ 312
++ + A + +KK V + Y +I Y+ G ++ F + + K
Sbjct: 439 KMSDMAADAFLKMKK----VGIKPTSHSYTAMIHAYSVSGWHEKAYAVFENMIREGIKPS 494
Query: 313 LNRDYITMLGSLVKIGELEEAEKMLEEWEL--SCYCYDFRVP-NIILLGYSQKGMIEKAD 369
+ Y T+L + ++G + E +++ W+L S +V NI++ G++++G+ +A
Sbjct: 495 IE-TYTTLLDAFRRVG---DTETLMKIWKLMMSEKVKGTQVTFNILVDGFAKQGLFMEAR 550
Query: 370 AVLKEIVKKGKTPTPNSWSIIAAGYA 395
V+ E K G PT +++++ YA
Sbjct: 551 DVISEFGKIGLQPTVMTYNMLINAYA 576
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 124/274 (45%), Gaps = 3/274 (1%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+Y L++ Y + V+E+ L +MK G +A+ +N +M Y+ Q + + +L +M
Sbjct: 356 VYNTLMDAYCKSNRVEEAEGLFVEMKAKGIKPTAVTFNILMYAYSRRMQPKIVESLLAEM 415
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
K+ G+ P+ SY I++YG + ++S M + I +Y+ + + Y ++G
Sbjct: 416 KDFGLKPNANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTAMIHAYSVSGW 475
Query: 259 KEKA-IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
EKA ++ + + S + Y L+ + +G+ + +MK W L + K +
Sbjct: 476 HEKAYAVFENMIREGIKPSIET--YTTLLDAFRRVGDTETLMKIWKLMMSEKVKGTQVTF 533
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
++ K G EA ++ E+ N+++ Y++ G+ +LKE+
Sbjct: 534 NILVDGFAKQGLFMEARDVISEFGKIGLQPTVMTYNMLINAYARGGLDSNIPQLLKEMEA 593
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
P ++S + + + ++AF KE +
Sbjct: 594 LRLRPDSITYSTVIYAFVRVRDFKRAFFYHKEMV 627
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 103/265 (38%), Gaps = 40/265 (15%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
K+Y L R + D+ + L + + F + YN + G+++ V
Sbjct: 214 KVYTTLFPLLGRARMGDKLMVLFRNLPSSKEFRNVRVYNAAISGLLYDGRYKDAWKVYES 273
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWG--TYSTVANYYII 255
M+ +GV PD+ + I I G R S ++ Q E + + WG + + + +
Sbjct: 274 METDGVLPDHVTCSIMI--IGMRKLGHSAKDAWQFFEKMNQKGVRWGKEAFGALIKSFCV 331
Query: 256 AGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR 315
GL +A+I + E S +A+ YN L+ Y CK NR
Sbjct: 332 EGLLSEALIIQSEMEK-KGISSNAIVYNTLMDAY-------------------CKS--NR 369
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
+EEAE + E + NI++ YS++ + +++L E+
Sbjct: 370 --------------VEEAEGLFVEMKAKGIKPTAVTFNILMYAYSRRMQPKIVESLLAEM 415
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNM 400
G P NS++ + + Y + M
Sbjct: 416 KDFGLKPNANSYTCLISAYGRQKKM 440
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 146/353 (41%), Gaps = 20/353 (5%)
Query: 70 LELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNS 129
L ++ L R H M G G + + + L + + + E A + F
Sbjct: 18 LSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77
Query: 130 LNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQ 187
+ + + Y L+ R VDE+ L+ +M + G + + Y ++ G+
Sbjct: 78 MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137
Query: 188 HEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYS 247
++ D+ M G PPD Y + I+ + + ++ + +EM ++ G
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEM-------LEKGCIP 190
Query: 248 TVANY-YIIAGLKEKA----IIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMK 300
TV Y +++G K + L K D++ + + +N+L+ + +G+ E +
Sbjct: 191 TVFTYNSLLSGFSRKGEFGRVQSLFK--DMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHR 248
Query: 301 -FWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGY 359
F ++ + C + Y T++ + G+ EA+++L E S D NI++ GY
Sbjct: 249 LFLEMRSLGCPPDV-VSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGY 307
Query: 360 SQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
S+ G ++ A + EI K G P S+S I + AF K+ +A
Sbjct: 308 SKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIA 360
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 143/330 (43%), Gaps = 27/330 (8%)
Query: 104 VHDHAVQLDLIGK---VRGLESAETYFNSLNDEDKVDKL---------YGALLNCYVREG 151
+ D DL+ K R L + T F +L+ + + + G +LN Y G
Sbjct: 147 IEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNG 206
Query: 152 LV--------DESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
L+ +E+L + ++M G S Y+ +M G KI ++L +MK G+
Sbjct: 207 LIHLLLPGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGL 266
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAI 263
P+ ++Y ICI + G + + +EM+ + D TY+ + + AG +KA
Sbjct: 267 RPNIYTYTICIRALGRARRIDDAWGIFKEMDDEG-CGPDVITYTVLIDALCAAGKLDKAK 325
Query: 264 -IYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLG 322
+Y+K S S D + Y L+ + +G+ + + +FW ++ Y ++
Sbjct: 326 ELYVKM--RASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIE 383
Query: 323 SLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTP 382
+L K G+++ A ML+ + N ++ G + +++A +L+ + G P
Sbjct: 384 ALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKP 443
Query: 383 TPNSWSIIAAGYADKNNMEKA---FECMKE 409
T S+ + Y + KA FE MK+
Sbjct: 444 TAFSYVLFIDYYGKSGDPAKAIDTFETMKK 473
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 127/288 (44%), Gaps = 20/288 (6%)
Query: 111 LDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGS 168
+D GKV LE+ + ++N + + + Y L+ + G VD + ++ M G
Sbjct: 347 MDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGI 406
Query: 169 FGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMEN 228
F + YN ++C + ++ ++L +M+ GV P FSY + I+ YG + + +
Sbjct: 407 FPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAID 466
Query: 229 VLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY--LKKCEDIVSKSKDALGYNHLI 286
+ M+ + + +++ + E I+ L KC S D++ YN L+
Sbjct: 467 TFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKC----GLSPDSVTYNMLM 522
Query: 287 SHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI---TMLGSLVKIGELEEAEKM---LEEW 340
Y+ G D+ + L K D + +++ +L K G ++ A KM L+
Sbjct: 523 KCYSKAGQIDKATQ---LLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNL 579
Query: 341 ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWS 388
+L+ + NI+L G ++G I KA + + + G P +++
Sbjct: 580 KLAPTVVTY---NILLTGLGKEGKILKALELFGSMTESGCPPNTITFN 624
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 125/299 (41%), Gaps = 46/299 (15%)
Query: 164 KEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSEL 223
K +G + +YN +M + EK ++ DMK G P+NF+Y + ++++G +
Sbjct: 788 KNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRI 847
Query: 224 SSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYN 283
+ + ++ EM S+ G + AI + I+S + N
Sbjct: 848 NKLYDLYSEMRSR--------------------GCEPNAITH----NIIISALVKSNNLN 883
Query: 284 HLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELS 343
+ Y L + D C Y ++ L+K G E+A K+ EE
Sbjct: 884 KALDLYYELMSGD-------FSPTPCT------YGPLIDGLLKAGRSEQAMKIFEEMLDY 930
Query: 344 CYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
+ + NI++ G+ + G I+ A + K++VK+G P S++I+ ++
Sbjct: 931 GCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRID-- 988
Query: 404 FECMKEALAVHEENKFWRPKPSLVSS--ILDWLGDNRDVEEVEAFVSSLKIKVQKRNMY 460
EA+ EE K P VS I++ LG +R ++E + S +K + ++Y
Sbjct: 989 -----EAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLY 1042
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 2/159 (1%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+Y L+N + + G +D + L +KM + G +Y ++ TG+ ++ ++
Sbjct: 938 IYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEEL 997
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
K G+ PD SY IN G L ++ EM+++ IS D TY+ + + IAG
Sbjct: 998 KLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRG-ISPDLYTYNALILHLGIAGK 1056
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDE 297
+ A+ ++ + +V YN LI ++ GNKD+
Sbjct: 1057 VDVAVKMYEELQ-LVGLEPSVFTYNALIRGHSLSGNKDQ 1094
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 79/376 (21%), Positives = 140/376 (37%), Gaps = 54/376 (14%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLN----DEDKVDKLYGAL 143
A+ E M +G+ S+ L + + + AE FN L+ D V Y L
Sbjct: 464 AIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVT--YNML 521
Query: 144 LNCYVREGLVDESLSLMQKMKEMGS--------------------------FG------- 170
+ CY + G +D++ L+ +M G FG
Sbjct: 522 MKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKL 581
Query: 171 --SALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMEN 228
+ + YN ++ G+ K ++ M E+G PP+ ++ ++ +
Sbjct: 582 APTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALK 641
Query: 229 VLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISH 288
+ M + + + D TY+T+ I G + A + + + + S D + LI
Sbjct: 642 MFCRM-TMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKKFL--SPDYVTLCTLIPG 698
Query: 289 YASLGNKDEMMK-FWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCY 347
G ++ +K C + ++ + ++ ++ E+EEA E + C
Sbjct: 699 VVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQ 758
Query: 348 DFRV--PNIILLGYSQKGMIEKADAVLKEIVKK-GKTPTPNSWSIIAAGYADKNNMEKA- 403
D V P I +L +K + A V + K G PT S++ + G N EKA
Sbjct: 759 DDHVMLPLIKVLCKRKKAL--DAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKAL 816
Query: 404 --FECMKEALAVHEEN 417
FE MK A H N
Sbjct: 817 ELFEDMKSA-GTHPNN 831
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 106/247 (42%), Gaps = 6/247 (2%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I L R + A+++ E M G + + + ++ GK ++ A F + E
Sbjct: 907 LIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEG 966
Query: 135 KVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
L Y L+ C G +DE++ +++K G ++YN I+ + + ++
Sbjct: 967 IRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEAL 1026
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
+ +MK G+ PD ++Y I G ++ + +E++ + TY+ +
Sbjct: 1027 SLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVG-LEPSVFTYNALIRG 1085
Query: 253 YIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHY--ASLGNKDEMMKFWGLQKIKCK 310
+ ++G K++A KK +V S + + L + Y A L + F GL I
Sbjct: 1086 HSLSGNKDQAFSVFKKMM-VVGCSPNTETFAQLPNKYPRAGLVHNPFGAVFIGLFFIFTS 1144
Query: 311 KQLNRDY 317
+LN+ Y
Sbjct: 1145 IRLNQFY 1151
>gi|357111163|ref|XP_003557384.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Brachypodium distachyon]
Length = 821
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 147/334 (44%), Gaps = 37/334 (11%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ALL Y G+ ++L + + +K+ G ++Y ++ Y +GQ EK + +M+
Sbjct: 370 YNALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKAREAFKEMR 429
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+N P+ SY I++YG+ ++L EME + I D + ST+ + A +
Sbjct: 430 KNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEME-KDGIPPDVVSISTL----LTACGR 484
Query: 260 EKAIIYLKKCEDIVSKSK------DALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQL 313
+ I K + I+ +K + + YN I Y + G+ + ++ + + +
Sbjct: 485 CRQI---TKIDTILEAAKSRGIKLNIVCYNSGIGSYLNFGDYGKALELYA---VMMASNV 538
Query: 314 NRDYIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVP------NIILLGYSQKGM 364
N D +T ++ L K+G+ E+ K E+ D R+P + ++ Y ++G
Sbjct: 539 NPDAVTYNILISGLCKVGKYAESLKFFED------MVDLRIPLTKEVYSSLICSYVKQGK 592
Query: 365 IEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKP 424
+ +A++ + + G P +++ + Y D + A++ KE E +P
Sbjct: 593 LTEAESTFSSMKESGCLPDVLTYTAMIEAYNDDGSWRNAWDLFKEM-----EGNTVQPDA 647
Query: 425 SLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRN 458
+ SS+++ L E V + +K K N
Sbjct: 648 IICSSLMEALNRGSQHERVLQLMELMKEKCIPLN 681
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 150/381 (39%), Gaps = 65/381 (17%)
Query: 52 SLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQ----------GLA 101
++ VL+ W + + +IR++ +HA+ V WM Q G+
Sbjct: 105 AVDAVLNCW---AGRFARRNFPLLIREITFAGSLQHAVHVFRWMKNQENYCARNDIYGMM 161
Query: 102 FSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREG-------LVD 154
+H Q+D + RGL + D D +Y +L++ + R G ++D
Sbjct: 162 IRLHARHSQID---QARGLFFEMQEWRCKPDAD----IYNSLIHAHARAGQWRWAINIMD 214
Query: 155 E----------------------------SLSLMQKMKEMGSFGSALNYNGIMCLYTNTG 186
+ +L L +KM G + +N ++ + N
Sbjct: 215 DMLRAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTRNGVGPDLVTHNIVLSAFKNGS 274
Query: 187 QHEKIPDVLLDMKENGVPPDNFSYRI---CINSYGARSELSSMENVLQEMESQSHISMDW 243
Q+ K MK + PD F+ I C+ G E + N ++E +Q D
Sbjct: 275 QYSKAIAYFEMMKGANIAPDTFTLNIVIHCLVKDGQYGEAIELLNSMREKRTQC--PPDV 332
Query: 244 GTYSTVANYYIIAGLKE--KAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKF 301
TY+++ + Y + G E KA+ + E + + + YN L+ YAS G + +
Sbjct: 333 VTYTSIMHSYYVCGKVEDCKAVFDMMVAEGV---KPNIVSYNALLGAYASRGMHADALGI 389
Query: 302 WGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQ 361
+ L K + Y T+L + + G+ E+A + +E + + N ++ Y
Sbjct: 390 FKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYGS 449
Query: 362 KGMIEKADAVLKEIVKKGKTP 382
GM ++A ++L E+ K G P
Sbjct: 450 AGMFKEAISLLHEMEKDGIPP 470
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 110/250 (44%), Gaps = 18/250 (7%)
Query: 100 LAFSVHDHAVQLDLIGKVRGLESAETYFNSLND-EDKVD-------KLYGALLNCYVREG 151
+A +V+ AV +++ + GL Y SL ED VD ++Y +L+ YV++G
Sbjct: 534 MASNVNPDAVTYNIL--ISGLCKVGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQG 591
Query: 152 LVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYR 211
+ E+ S MKE G L Y ++ Y + G D+ +M+ N V PD
Sbjct: 592 KLTEAESTFSSMKESGCLPDVLTYTAMIEAYNDDGSWRNAWDLFKEMEGNTVQPDAI--- 648
Query: 212 ICINSYGARSELSSMENVLQEME--SQSHISMDWGTY-STVANYYIIAGLKEKAIIYLKK 268
IC + A + S E VLQ ME + I ++ Y +A+ ++ K + I
Sbjct: 649 ICSSLMEALNRGSQHERVLQLMELMKEKCIPLNQKAYFEIIASCSMLRDWKTASEIIEHL 708
Query: 269 CEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIG 328
+ S S L NHL++ G + MMK + C Y +L +L+ +G
Sbjct: 709 DSSLSSISVGTL--NHLLTFLGKCGKTECMMKLFYKMMSSCSTVGVSTYTVLLRNLLAVG 766
Query: 329 ELEEAEKMLE 338
+ + ++L+
Sbjct: 767 KWRKYIEVLQ 776
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 143/310 (46%), Gaps = 19/310 (6%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +++ + G V E+L ++++M E G Y I+ G+ ++ ++ M
Sbjct: 13 YSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELFHKMI 72
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E G + +Y IN + +L+EM S+ + D TY+T+ + G
Sbjct: 73 ERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGY-EPDNITYNTILSGLCRMGKV 131
Query: 260 EKAIIYLKKCEDIVSK--SKDALGYNHLISHYASLGNKDEMMKFWGLQKIK--CKKQLNR 315
+A + + + S+ S D + YN L+ +L + ++ + WGL K +++
Sbjct: 132 SEAKQFF---DSMPSRGYSPDVVAYNGLLD---ALYKEGKVAEAWGLFKTMDMADRKVAP 185
Query: 316 DYIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
D IT ++ ++ + +EA K+ ++ Y D N ILLG ++K +++A+ +
Sbjct: 186 DLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMF 245
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILD 432
K++V G P ++SI+ +G+ NM + E +E K + P L ++++D
Sbjct: 246 KKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEM-----TEKRFSPDVLLCNAVID 300
Query: 433 WLGDNRDVEE 442
L + V++
Sbjct: 301 MLCKAKKVDD 310
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 69/369 (18%), Positives = 150/369 (40%), Gaps = 43/369 (11%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I L + AL++ E M+ +G+ V + + +D + + ++ A+ F+ + +
Sbjct: 16 IISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELFHKMIERG 75
Query: 135 KVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
Y AL+N ++ ++ + L+++M G + YN I+ G+ +
Sbjct: 76 CSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEAK 135
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEME-SQSHISMDWGTYSTVAN 251
M G PD +Y +++ +++ + + M+ + ++ D TY+T+ +
Sbjct: 136 QFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLID 195
Query: 252 YYIIAGLKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDE------------ 297
+ ++A+ K D+++K D + YN ++ A N DE
Sbjct: 196 GFCRVEKTDEAMKLFK---DVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSG 252
Query: 298 --------------------MMKFWGLQKIKCKKQLNRDYI---TMLGSLVKIGELEEAE 334
M + L + +K+ + D + ++ L K ++++A
Sbjct: 253 CAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAH 312
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGY 394
K+LEE D NI+L G + +++KA + +V G P S+S++ G
Sbjct: 313 KVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGL 372
Query: 395 ADKNNMEKA 403
N + A
Sbjct: 373 CKTNKVHDA 381
Score = 41.6 bits (96), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 4/130 (3%)
Query: 83 KRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED---KVDKL 139
KR A+++ ++M +G V H + L + + L A +F S+ D D +
Sbjct: 446 KRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVV 505
Query: 140 -YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
Y L+N + G VD+++ Q+M G + YN +M G+H + + M
Sbjct: 506 TYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAM 565
Query: 199 KENGVPPDNF 208
KE G D F
Sbjct: 566 KEKGFLSDCF 575
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 57/310 (18%), Positives = 118/310 (38%), Gaps = 43/310 (13%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
VI L K+ A +V E MS G V + + LD + K ++ A F+++ D
Sbjct: 298 VIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNG 357
Query: 135 KVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+ Y +LN + V ++ L +M E + +N +M G+ ++
Sbjct: 358 CAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAK 417
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
D+L M E+ V PD + ++ + Q M + ++
Sbjct: 418 DLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVA------------ 465
Query: 253 YIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQ 312
D L +N +++ G + + F+ +K +
Sbjct: 466 -------------------------DVLPHNIVLAGLCREGKLAQALLFFK-SMVKSDGE 499
Query: 313 LNRD---YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKAD 369
+ D Y T++ +L++ G +++A ++ S D+ N ++ G ++G +AD
Sbjct: 500 FSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQAD 559
Query: 370 AVLKEIVKKG 379
+ + + +KG
Sbjct: 560 RLTQAMKEKG 569
>gi|255660894|gb|ACU25616.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 481
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 92/432 (21%), Positives = 185/432 (42%), Gaps = 32/432 (7%)
Query: 79 LRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAETYFNSLN------ 131
L S K +HALQ W+ L + H ++++G+ L A +
Sbjct: 19 LHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEW 78
Query: 132 DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
DED ++ +++ Y ++G+V ES+ + QKM+E+G + +YN + + G++
Sbjct: 79 DED----MWVMMIDSYGKQGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMA 134
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
M G+ P ++ + I + ++ + ++M+S+ IS D TY+T+ N
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETXNRFFEDMKSR-EISPDVVTYNTMIN 193
Query: 252 -YYIIAGLKEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
YY + ++E +++ K +I + Y LI Y S+ D+ ++ K
Sbjct: 194 GYYRVKKMEEAEKYFVEMKGRNI---EPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFG 250
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYC--YDFRVPNIILLGYSQKGMIEK 367
K Y T+L L ++ EA +L+E + Y D + ++ + + G ++
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARVILKEM-MDKYLAPTDNSIFMRLISSHCKSGNLDA 309
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPK---- 423
A VLK +++ + ++ + +KA + + + + E++ RP+
Sbjct: 310 AADVLKAMIRLSVPTEAGHYGVLIENFCKVGQYDKAVKLLDKLI---EKDIILRPQSTLH 366
Query: 424 --PSLVSSILDWLGDNRDVEEVEAFVSSL-KIKVQKRNMYHALTEAHIRSGQEVDG--LL 478
PS + +++L +N + E V L K+ VQ + L + G LL
Sbjct: 367 LEPSAYNPXIEYLCNNGQAXKAETLVRQLXKLGVQDPTALNTLIRGXSQEGSPDSAFELL 426
Query: 479 ESMKADDIDEDK 490
+ M +D +K
Sbjct: 427 KIMLRRKVDSEK 438
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 136/328 (41%), Gaps = 54/328 (16%)
Query: 116 KVRGLESAETYFNSL---NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
+V+ +E AE YF + N E V Y L+ YV VD++L L+++MK G +A
Sbjct: 197 RVKKMEEAEKYFVEMKGRNIEPTV-VTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNA 255
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP-DNFSYRICINSYGARSELSSMENVLQ 231
+ Y+ ++ N + + +L +M + + P DN + I+S+ L + +VL+
Sbjct: 256 ITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLK 315
Query: 232 EMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC--EDIVSKSKDAL-----GYNH 284
M S + + G Y + + G +KA+ L K +DI+ + + L YN
Sbjct: 316 AMIRLS-VPTEAGHYGVLIENFCKVGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNP 374
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSC 344
I + + G Q K + T++ L K+G
Sbjct: 375 XIEYLCNNG-----------QAXKAE--------TLVRQLXKLG---------------- 399
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
D N ++ G SQ+G + A +LK ++++ ++++ + Y KN A
Sbjct: 400 -VQDPTALNTLIRGXSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDA- 457
Query: 405 ECMKEALAVHEENKFWRPKPSLVSSILD 432
K AL EN P L S+++
Sbjct: 458 ---KAALDSMIENDHL-PDSXLFRSVME 481
>gi|357509511|ref|XP_003625044.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500059|gb|AES81262.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 521
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 85/422 (20%), Positives = 178/422 (42%), Gaps = 48/422 (11%)
Query: 16 FTKTNLEIFTRAYRAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQ---------K 66
F+ T+++ T+ + P+ L P G D+ + + Q
Sbjct: 10 FSTTSIQSHTKTHSPYLPIPHRTL---PQPKGQ-DLDFINIFHSHFIHSQWEKLTPFSKT 65
Query: 67 ISELELQRVIRQLRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAET 125
++ ++Q ++ +L++ +L+ W+ + ++H H+ L ++ K R ++A++
Sbjct: 66 LTPFKIQHILLKLQNDAVL--SLKFFNWVQTHNPNSHTLHTHSFLLHILTKNRNFKTAQS 123
Query: 126 YFNSLNDEDKVDKLYGALLNCYV---REGLVDESL--------------SLMQKMKEMGS 168
F+ + + L+ +LL+ Y LV ++L KMKE G
Sbjct: 124 IFSKIITTN--SNLFESLLHSYTLCNSSPLVFDTLFKTFAHMNKLRNATDTFVKMKEYGF 181
Query: 169 FGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMEN 228
F + + N + + E + M+ N + P+ ++ + +++Y EL+
Sbjct: 182 FPTVESCNAFLSSMLYLKRPELVVSFYRQMRRNRISPNVYTINMVVSAYCKLGELNKASE 241
Query: 229 VLQEMESQSHISMDWGTYSTVANY-YIIAGLKEKAIIYLK-KCEDIVSKSK----DALGY 282
VL++M+ D G V + +I+G +K ++ L K D++ + + +
Sbjct: 242 VLEKMK-------DMGLCPNVVTFNSLISGYCDKGLLGLALKVRDLMMGKNGVFPNVVTF 294
Query: 283 NHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWEL 342
N LI+ + G E + + K+ Y T++ + G E + EE E
Sbjct: 295 NTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTLINGFGQAGNSEMGIGLFEEMER 354
Query: 343 SCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEK 402
+ D N ++LG ++G +KA ++KE+ K P +++S + AG +NN E+
Sbjct: 355 NKVKADILTYNGLILGLCKEGKTKKAAYMVKELDKGNLVPNASTFSALIAGQCVRNNSER 414
Query: 403 AF 404
AF
Sbjct: 415 AF 416
>gi|449444598|ref|XP_004140061.1| PREDICTED: pentatricopeptide repeat-containing protein At5g27270-like
[Cucumis sativus]
Length = 1062
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 113/247 (45%), Gaps = 16/247 (6%)
Query: 64 GQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESA 123
G ++ + I+ + + A ++ E M G+ S+ + + + G+ R L+ A
Sbjct: 768 GLELDTVAFNTFIKAMLEGGKLHFASRIYEHMIALGIVPSIQTYNTMISVYGRGRKLDKA 827
Query: 124 ETYFNSLNDE--DKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCL 181
FN+ +K Y L++CY + G E+ L ++M E G ++YN ++ +
Sbjct: 828 VEMFNAARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEMLEEGVKPGMVSYNIMVNV 887
Query: 182 YTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISM 241
Y N G HE+ ++L M+++ + PD+F+Y I +Y + S E ++ M+ +
Sbjct: 888 YANAGLHEETENLLKAMEQDAIVPDSFTYFSLIRAYTQSCKYSEAEKIINSMQEK----- 942
Query: 242 DWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK------SKDALGYNHLISHYASLGNK 295
G +T A+Y ++ KA + ++K E + + S D L+ Y G
Sbjct: 943 --GIPTTCAHYDLLLSALAKAGM-IRKAERVYDELQTAGLSPDVTCNRTLMRGYLDYGYV 999
Query: 296 DEMMKFW 302
E +KF+
Sbjct: 1000 REGIKFF 1006
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 136/346 (39%), Gaps = 42/346 (12%)
Query: 67 ISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAF--SVHDHAVQLDLIGKVRGLESAE 124
+ +L + + L+ +K ++ V +WM Q L++ SV + + L G+V ++ AE
Sbjct: 151 VEKLTFREMCIVLKEQKGWRQVRDVFDWMKLQ-LSYRPSVIVYTIVLRAYGQVGKIKLAE 209
Query: 125 -TYFNSLNDEDKVDKLY-GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLY 182
T+ L + D++ G +L Y R G LS +K+ G +N ++
Sbjct: 210 ETFLEMLEVGLEPDEVACGTMLCTYARWGHHKTMLSFYSAVKDRGIVPPIAVFNFMLSSL 269
Query: 183 TNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMD 242
G H K+ ++ + M E GV +F+Y + INS V EM++ I
Sbjct: 270 QKKGLHAKVKELWMQMVEIGVTFSDFTYTVVINSLVKEGHSEEAFKVFNEMKNCGFIP-- 327
Query: 243 WGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFW 302
+ + YN LIS N DE+++ +
Sbjct: 328 -----------------------------------EEVTYNLLISLSIKRENSDEVLRLY 352
Query: 303 GLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQK 362
+ K N ++L K G+ +A + E E D + +++ Y +
Sbjct: 353 KDMRDKDIVPSNYTCSSLLTLFYKNGDYSKALSLFSEMESKKVVVDEVIYGLLIRIYGKL 412
Query: 363 GMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMK 408
G+ E A +E+ + G S+ +A + + N EKA + ++
Sbjct: 413 GLYEDAHKTFEEMEQLGLLTDEKSYLAMAQVHLNSRNFEKALDIIE 458
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 149/348 (42%), Gaps = 50/348 (14%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+YG L+ Y + GL +++ ++M+++G +Y + ++ N+ EK D++ M
Sbjct: 401 IYGLLIRIYGKLGLYEDAHKTFEEMEQLGLLTDEKSYLAMAQVHLNSRNFEKALDIIELM 460
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
K + F+Y + + Y + ++ S E+ Q + G + YI+
Sbjct: 461 KSRNIWLSRFAYIVSLQCYVMKEDIRSAESTFQALSKT-------GLPDARSCIYILN-- 511
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLG--NKDEMMKFWGLQKIKCKKQLNRD 316
+YLK D+V+K+KD I+H G +E+ K + ++ CK+ L+ D
Sbjct: 512 -----LYLKL--DLVNKAKD------FIAHIRKDGVVFDEELYKL--VLRVYCKEGLSED 556
Query: 317 YITMLGSLVKIGELEEAEKMLEEW------------ELSCYCY---DFRVPNIILLGYSQ 361
+L L+K EL K +E + E + Y D ++IL Y
Sbjct: 557 -AEILIELMKKDELFVDNKFMETFSFMFKLDGGEKNESTIVGYDQPDHIALDMILRLYLA 615
Query: 362 KGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWR 421
G + K + +LK I+ KG S + A + + KA KE L + R
Sbjct: 616 NGDVSKRNKILKFIIGKGGVTV---VSQLVANLIREGDSLKAGTLTKELLKLD-----CR 667
Query: 422 PKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNMYHALTEAHIR 469
++++S++ G R + + ++++ ++ ++ +A+I+
Sbjct: 668 LDDAIIASLISLYGKERKINQAAEVLAAVANSCTSTLIFGSMIDAYIK 715
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 87/212 (41%), Gaps = 6/212 (2%)
Query: 159 LMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYG 218
+ + M +G S YN ++ +Y + +K ++ + +G+ PD +Y I+ YG
Sbjct: 795 IYEHMIALGIVPSIQTYNTMISVYGRGRKLDKAVEMFNAARSSGLSPDEKAYTNLISCYG 854
Query: 219 ARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCED--IVSKS 276
+ + +EM + + +Y+ + N Y AGL E+ LK E IV
Sbjct: 855 KAGKTHEASLLFKEMLEEG-VKPGMVSYNIMVNVYANAGLHEETENLLKAMEQDAIVP-- 911
Query: 277 KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKM 336
D+ Y LI Y E K + K Y +L +L K G + +AE++
Sbjct: 912 -DSFTYFSLIRAYTQSCKYSEAEKIINSMQEKGIPTTCAHYDLLLSALAKAGMIRKAERV 970
Query: 337 LEEWELSCYCYDFRVPNIILLGYSQKGMIEKA 368
+E + + D ++ GY G + +
Sbjct: 971 YDELQTAGLSPDVTCNRTLMRGYLDYGYVREG 1002
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 66/330 (20%), Positives = 132/330 (40%), Gaps = 49/330 (14%)
Query: 108 AVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMG 167
A + L GK R + A ++ + ++G++++ Y++ +E+ +L +++ E G
Sbjct: 674 ASLISLYGKERKINQAAEVLAAVANSCTSTLIFGSMIDAYIKCDKAEEASTLYKELIEKG 733
Query: 168 SFGSALNYNGIMCLYTNTGQHEKIPDVL---------LD--------------------- 197
A+ + I+ T G+H +V+ LD
Sbjct: 734 YDLGAVAVSRIVNTLTVGGKHRVAENVVRASLNCGLELDTVAFNTFIKAMLEGGKLHFAS 793
Query: 198 -----MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
M G+ P +Y I+ YG +L + S S +S D Y+ + +
Sbjct: 794 RIYEHMIALGIVPSIQTYNTMISVYGRGRKLDKAVEMFNAARS-SGLSPDEKAYTNLISC 852
Query: 253 YIIAG-LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKK 311
Y AG E ++++ + E+ V + YN +++ YA+ G +E +
Sbjct: 853 YGKAGKTHEASLLFKEMLEEGVKPG--MVSYNIMVNVYANAGLHEETENLLKAMEQDAIV 910
Query: 312 QLNRDYITMLGSLVKIGELEEAEKMLEEWE-----LSCYCYDFRVPNIILLGYSQKGMIE 366
+ Y +++ + + + EAEK++ + +C YD ++L ++ GMI
Sbjct: 911 PDSFTYFSLIRAYTQSCKYSEAEKIINSMQEKGIPTTCAHYD-----LLLSALAKAGMIR 965
Query: 367 KADAVLKEIVKKGKTPTPNSWSIIAAGYAD 396
KA+ V E+ G +P + GY D
Sbjct: 966 KAERVYDELQTAGLSPDVTCNRTLMRGYLD 995
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 92/419 (21%), Positives = 186/419 (44%), Gaps = 30/419 (7%)
Query: 79 LRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV-- 136
L+S AL + G+G+ + ++ L+ + K +E AE SL + V
Sbjct: 217 LKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPG 276
Query: 137 DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
+ +Y ++N Y + G +D ++ +++M+ G + + +N ++ + +K + +
Sbjct: 277 EVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVK 336
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
M G+ P +Y I I+ YG S +L+EME + +Y ++ N
Sbjct: 337 KMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGE-KPNVISYGSLINCLCKD 395
Query: 257 GLKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN 314
G +A + L+ D+V + +A YN LI ++G E ++F+
Sbjct: 396 GKILEAEMVLR---DMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATI 452
Query: 315 RDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
Y +++ L K+G+L+EAE+M + +C D N ++ GYS G +K + +
Sbjct: 453 VTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYET 512
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEE--NKFWR----PKPSLVS 428
+ K G PT N++ + +G C KE + + E N+ + P + +
Sbjct: 513 MKKLGLKPTINTFHPLISG------------CSKEGIKLKETLFNEMLQMNLSPDRVVYN 560
Query: 429 SILDWLGDNRDVEEVEAFVSSL-KIKVQKRN-MYHALTEAHIRSGQ--EVDGLLESMKA 483
+++ + V++ + + + V+ N Y++L H++ G+ E L++ MKA
Sbjct: 561 AMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKA 619
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 85/397 (21%), Positives = 169/397 (42%), Gaps = 55/397 (13%)
Query: 85 FKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDK--LYGA 142
K A+++ E M + + +V + V + + K + + AE F ++ + V +
Sbjct: 82 LKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNT 141
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
L++ Y + G VD ++ L ++MK+ S + +N ++ + E+ +L ++K NG
Sbjct: 142 LIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNG 201
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
PD F+Y I + + + L + +D T S + N G EKA
Sbjct: 202 FVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKA 261
Query: 263 IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLG 322
LK L+ H G E++ Y T++
Sbjct: 262 EEVLK----------------SLVEHGLVPG---EVI-----------------YNTIVN 285
Query: 323 SLVKIGELEEAEKMLEEWE---LSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
+IG+++ A +E+ E L C F N ++ + + MI+KA+ +K++V KG
Sbjct: 286 GYCQIGDMDRAILTIEQMESRGLRPNCIAF---NSVIDKFCEMQMIDKAEEWVKKMVGKG 342
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVS--SILDWLGDN 437
P+ +++I+ GY + F+ ++E EEN KP+++S S+++ L +
Sbjct: 343 IAPSVETYNILIDGYGRLCVFSRCFQILEEM----EENG---EKPNVISYGSLINCLCKD 395
Query: 438 RDVEEVEAFVSSL--KIKVQKRNMYHALTEAHIRSGQ 472
+ E E + + + + N+Y+ L + G+
Sbjct: 396 GKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGK 432
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 67/136 (49%), Gaps = 7/136 (5%)
Query: 86 KHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLN----DEDKVDKLYG 141
+ L++ E M GL +++ + K G++ ET FN + D+V +Y
Sbjct: 504 QKCLELYETMKKLGLKPTINTFHPLISGCSK-EGIKLKETLFNEMLQMNLSPDRV--VYN 560
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
A+++CY G V ++ SL ++M +MG YN ++ + G+ + D++ DMK
Sbjct: 561 AMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAK 620
Query: 202 GVPPDNFSYRICINSY 217
G+ P+ +Y + I +
Sbjct: 621 GLIPEADTYSLLIQGH 636
>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 831
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 140/344 (40%), Gaps = 53/344 (15%)
Query: 104 VHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKM 163
+H +AV DL G + +E E S N Y +++ Y R G V+ + Q+
Sbjct: 234 IHAYAVAQDLRGAIACVEEMEAEGVSPNA-----ATYSVIISGYGRLGDVEAAERWFQRA 288
Query: 164 KEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK------------------------ 199
+ + YN I+ Y G E+ ++ M+
Sbjct: 289 LSENWHHNDVIYNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAV 348
Query: 200 --------------ENGVPPDNFSYRICINSYGARSELSSMENVLQ---EMESQSHISMD 242
E G+ P SY IN Y S+L M+ LQ EME Q I +
Sbjct: 349 DKCLNVFRRLKARTETGLSPTVVSYGCLINLY---SKLGKMDKALQISNEMEDQG-IKHN 404
Query: 243 WGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFW 302
TYS + + Y+ G A + + K D + YN L++ + G + ++
Sbjct: 405 RKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIKP-DGITYNILMNAFCKNGQMNRALELL 463
Query: 303 G-LQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQ 361
++ C L R Y ++ +KIG+L A + + + +++ + N+I+ G +Q
Sbjct: 464 ARMESGDCPPTL-RTYTIIIDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQ 522
Query: 362 KGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
G +++A +++ E+V G P S++ + GYA +M AF+
Sbjct: 523 AGQMDRAASIIDEMVVAGVHPNERSYTTLIEGYACIGDMGLAFK 566
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/313 (20%), Positives = 138/313 (44%), Gaps = 4/313 (1%)
Query: 99 GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED--KVDKLYGALLNCYVREGLVDES 156
GL+ +V + ++L K+ ++ A N + D+ K Y +++ YV+ G +
Sbjct: 365 GLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANA 424
Query: 157 LSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINS 216
S+ + M G + YN +M + GQ + ++L M+ PP +Y I I+
Sbjct: 425 FSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDG 484
Query: 217 YGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS 276
+ +L +++M+ + TY+ + + AG ++A + + +
Sbjct: 485 FMKIGDLRMAFETVRDMK-MAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMV-VAGVH 542
Query: 277 KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKM 336
+ Y LI YA +G+ K++ K K Y ++L + K G ++ +
Sbjct: 543 PNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAI 602
Query: 337 LEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYAD 396
E + + + NI+L G++Q+G + +A +++++ +G TP +S++
Sbjct: 603 TAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFINACCK 662
Query: 397 KNNMEKAFECMKE 409
+M KA E +++
Sbjct: 663 AGDMLKATETIEQ 675
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 66/141 (46%), Gaps = 3/141 (2%)
Query: 126 YFNSLNDED-KVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYT 183
YFN + + K D + Y +LL + G + +L++ +M G + YN ++ +
Sbjct: 567 YFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAITAEMAAAGVPMNNYIYNILLDGWA 626
Query: 184 NTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDW 243
G + D++ M+ G+ PD SY IN+ ++ +++M+ Q + +
Sbjct: 627 QRGDMWEASDIMQKMRHEGLTPDIHSYTSFINACCKAGDMLKATETIEQMKQQG-VQPNL 685
Query: 244 GTYSTVANYYIIAGLKEKAII 264
Y+T+ + + A EKA+I
Sbjct: 686 QAYTTLIHGWASASYPEKALI 706
>gi|326503836|dbj|BAK02704.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 399
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/371 (18%), Positives = 147/371 (39%), Gaps = 57/371 (15%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLN 145
A++V + M + + + + +++ GK + SA F + + Y AL+N
Sbjct: 68 AVEVYQRMKRERCRTNTETYTLMINVYGKSKQPMSAMKVFKEMQSIGCKANICTYTALVN 127
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
+ REGL +++ + ++M++ G YN +M Y+ G + ++ M+ G P
Sbjct: 128 AFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGFPQAASEIFSLMQHMGCEP 187
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
D SY I +++YG E V + ++ Q G T+ ++ ++ ++
Sbjct: 188 DRASYNILVDAYGRAGLHREAEAVFESLKRQ-------GMAPTMKSHMLLLAAHARS-GN 239
Query: 266 LKKCEDIVSK------SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
+ +CE+++++ + D + N +++ Y G D+M + +++ RD T
Sbjct: 240 VARCEEVMAQLHKSGLAPDTIALNAMLNAYGRAGRLDDMERLLAAM----ERRGTRDVGT 295
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
N+ + Y + G +E+ +A + ++G
Sbjct: 296 Y--------------------------------NVAVNAYGRAGYLERMEAAFASLERRG 323
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRD 439
+W+ YA K + E +E + + P ++ D R
Sbjct: 324 LAADVVTWTSRMGAYARKKEYRRCLEIFEEMV-----DAGCYPDAGTAKVLVAACSDERQ 378
Query: 440 VEEVEAFVSSL 450
VE+V A V S+
Sbjct: 379 VEQVTAIVRSM 389
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 139/346 (40%), Gaps = 50/346 (14%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y LL Y G + + ++ +M+E G SA YN + EK +V MK
Sbjct: 17 YALLLRAYCTAGSLHRAEGVISEMREHGIPPSATVYNAYLDGLLKARCAEKAVEVYQRMK 76
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ +Y + IN YG + S V +EM+S + TY+ + N + GL
Sbjct: 77 RERCRTNTETYTLMINVYGKSKQPMSAMKVFKEMQSIG-CKANICTYTALVNAFAREGLC 135
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGL-QKIKCKKQLNRDYI 318
EKA ++ + D YN L+ Y+ G + + L Q + C+
Sbjct: 136 EKAEEVFEEMQQ-AGHEPDVYAYNALMEAYSRAGFPQAASEIFSLMQHMGCEP------- 187
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
D NI++ Y + G+ +A+AV + + ++
Sbjct: 188 -----------------------------DRASYNILVDAYGRAGLHREAEAVFESLKRQ 218
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNR 438
G PT S ++ A +A N+ + E M + +H+ P ++++L+ G
Sbjct: 219 GMAPTMKSHMLLLAAHARSGNVARCEEVMAQ---LHKSG--LAPDTIALNAMLNAYGRAG 273
Query: 439 DVEEVEAFVSSLKIK-VQKRNMYHALTEAHIRSGQEVDGLLESMKA 483
++++E +++++ + + Y+ A+ R+ G LE M+A
Sbjct: 274 RLDDMERLLAAMERRGTRDVGTYNVAVNAYGRA-----GYLERMEA 314
>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
Length = 825
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 154/360 (42%), Gaps = 22/360 (6%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y AL++ + +EG VD++ L KM+E G + + Y+ ++ T + +K VL M
Sbjct: 227 YNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMV 286
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
GV P+N +Y I+ Y V +EM S S + D G N ++ A K
Sbjct: 287 GAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEM-SSSLLVPDVGN----CNSFMTALCK 341
Query: 260 EKAIIYLKKCEDIV------SKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQL 313
I K+ DI D + Y L+ YA+ G M + + +
Sbjct: 342 HGRI---KEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPD 398
Query: 314 NRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
+ T++ + ++G ++++ M E+ D + ++ + + G ++ A
Sbjct: 399 RHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFN 458
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDW 433
++ G P +S + G ++ ++ KA E + + L+ P +SI++
Sbjct: 459 HMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLS----KGIPPPCIKFFTSIINN 514
Query: 434 LGDNRDVEEVEAFVSSLKIKVQKRNM--YHALTEAHIRSG--QEVDGLLESMKADDIDED 489
L V E + V + Q+ N+ +++L + + G +E GLL+SM++ ++ D
Sbjct: 515 LCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPD 574
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 80/419 (19%), Positives = 173/419 (41%), Gaps = 26/419 (6%)
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVD--KLYG 141
R K A + + M +G V + L + + FN + E V ++
Sbjct: 344 RIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFN 403
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
L+N Y R G++D+SL + + M + G + ++ ++ + G+ + + M +
Sbjct: 404 TLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDT 463
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
GVPPD Y I R +L + ++ +M S+ ++++ N KE
Sbjct: 464 GVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLC----KEG 519
Query: 262 AIIYLKKCEDIV---SKSKDALGYNHLISHYASLGNKDEMMKFW-GLQKIKCKKQLNRDY 317
+ K D++ + + + +N L+ Y +GN E + ++ + + + Y
Sbjct: 520 RVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDI-YTY 578
Query: 318 ITMLGSLVKIGELEEAEKMLEEW-----ELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
T++ K G +++A + + L+ Y NIIL G Q A +
Sbjct: 579 NTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSY-----NIILHGLFQARRTIVAKEMF 633
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILD 432
E+++ G + ++++ + G N ++A +++ +++ KF ++V +
Sbjct: 634 HEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNV--KFDILTFNIVIRAMF 691
Query: 433 WLGDNRDVEEVEAFVSSLKIKVQKRNMYHALTEAHIR--SGQEVDGLLESMKADDIDED 489
+G ++ +E+ A +S+ + V Y + I+ S ++ D L SM+ D
Sbjct: 692 KVGRRQEAKELFAAISTYGL-VPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPD 749
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 110/252 (43%), Gaps = 4/252 (1%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ +L++ Y G + E++ L+ M+ +G YN ++ Y G+ + + DM
Sbjct: 543 FNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDML 602
Query: 200 ENGVPPDNFSYRICINS-YGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
V + SY I ++ + AR + + E + +ES +S+ TY+TV
Sbjct: 603 HKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIH--TYATVLGGLCRNNC 660
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
++A + L+K + K D L +N +I +G + E + + Y
Sbjct: 661 TDEANMLLEKLFSMNVKF-DILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYR 719
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
M+ +L+K E+A+ + E S D R+ N I+ KG + KA L +I KK
Sbjct: 720 VMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKK 779
Query: 379 GKTPTPNSWSII 390
G P + S++
Sbjct: 780 GILPEATTTSLL 791
>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 80/395 (20%), Positives = 167/395 (42%), Gaps = 60/395 (15%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
++ AL + + G+++E++ KMK F + NG++ + G+ + + DM
Sbjct: 62 VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM 121
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
G P F+Y I I+ ++ + + +EM+ + + D TY+++ + + G
Sbjct: 122 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVP-DTVTYNSMIDGFGKVGR 180
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFW------GL-------- 304
+ + + ++ +D+ + D + YN LI+ + G ++F+ GL
Sbjct: 181 LDDTVCFFEEMKDMCCEP-DVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYS 239
Query: 305 -------------QKIKCKKQLNR--------DYITMLGSLVKIGELEEA----EKMLE- 338
Q IK + R Y +++ + KIG L +A +ML+
Sbjct: 240 TLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQV 299
Query: 339 --EWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYAD 396
EW + Y ++ G +++A+ + ++ G P S++ + G+
Sbjct: 300 GVEWNVVTY-------TALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 352
Query: 397 KNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQK 456
NM++A E + E + + +P L + + L +E + ++ +K K
Sbjct: 353 AKNMDRALELLNEL-----KGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIK 407
Query: 457 RN--MYHALTEAHIRSGQEVDG--LLESMKADDID 487
N +Y L +A+ +SG +G LL+ MK DI+
Sbjct: 408 ANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIE 442
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 90/472 (19%), Positives = 189/472 (40%), Gaps = 30/472 (6%)
Query: 21 LEIFTRAYR-AVKPVAR--NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIR 77
++ F++ R V P R N L R + LG D + + G + + +I
Sbjct: 80 IQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTD-DVKRFFKDMIGAGARPTVFTYNIMID 138
Query: 78 QLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLND---ED 134
+ + A + E M +GL + +D GKV L+ +F + D E
Sbjct: 139 CMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEP 198
Query: 135 KVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDV 194
V Y AL+NC+ + G + L ++MK G + ++Y+ ++ + G ++
Sbjct: 199 DV-ITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKF 257
Query: 195 LLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYI 254
+DM+ G+ P+ ++Y I+ A ++ ++ + + + ++W + A +
Sbjct: 258 YVDMRRVGLVPNEYTYTSLID---ANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTA---L 311
Query: 255 IAGLKEKAIIYLKKCEDIVSKSKDA------LGYNHLISHYASLGNKDEMMKFWGLQKIK 308
I GL + +K+ E++ K A YN LI + N D ++ K +
Sbjct: 312 IDGLCDAE--RMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGR 369
Query: 309 CKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKA 368
K Y T + L + ++E A+ ++ E + + + ++ Y + G +
Sbjct: 370 GIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEG 429
Query: 369 DAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKF-WRPKPSLV 427
+L E+ + T ++ ++ G + KA + N F + ++
Sbjct: 430 LHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRI-----SNDFGLQANAAIF 484
Query: 428 SSILDWLGDNRDVEEVEAFVSSLKIK--VQKRNMYHALTEAHIRSGQEVDGL 477
++++D L + VE + K V R Y +L + + + G ++ L
Sbjct: 485 TAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEAL 536
>gi|357521009|ref|XP_003630793.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524815|gb|AET05269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 584
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 169/358 (47%), Gaps = 38/358 (10%)
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
L++ +R+G E++++ + E G + + Y ++ T + IP +L ++ENG
Sbjct: 49 LMSTLIRKGKPHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSIPSLLSKVEENG 108
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
V PD+ + IN++ ++ + ++M+ + T++T+ + I G +A
Sbjct: 109 VKPDSILFNAMINAFSDSGKVHEAMKIFRKMK-ECGCKPTTSTFNTLIKGFGIVGRPHEA 167
Query: 263 IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD---YIT 319
+ L+ + + YN LI + + K+E+ + W + + D Y T
Sbjct: 168 MKLLEMMIQDGNVKPNERTYNILIQAWCT---KNELEEAWNVMHKMVNSGMQPDIVTYNT 224
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRV-PN-----IILLGYSQKGMIEKADAVLK 373
+ + + GE + AE+++ L Y+ +V PN II+ GY ++G + +A L
Sbjct: 225 LARAFAQNGETDNAERLI----LKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLY 280
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLV--SSIL 431
++ + G P P ++ + GY D + + ++EAL + EE + KP +V S+I+
Sbjct: 281 KMKELGVHPNPVVFNSLIKGYLDITDTDG----VEEALTLMEE---FGIKPDVVTYSTIM 333
Query: 432 D-W----LGDNRDVEEVEAFVSSLKIKVQKR-NMYHALTEAHIRSGQ--EVDGLLESM 481
+ W L DN + E F +K +++ Y L + ++R+GQ + + LL SM
Sbjct: 334 NAWSSSGLMDNCE----EIFDDMVKAEIEPDIQAYSILAKGYVRAGQPDKAEALLNSM 387
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 87/414 (21%), Positives = 166/414 (40%), Gaps = 84/414 (20%)
Query: 34 VARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSE 93
++R L S + G P ++T + + EG K + + ++ L KRF
Sbjct: 44 ISRTKLMSTLIRKGKPHEAVT-IFNSLTEEGHKPTIITYTTLVAALTRLKRFN------- 95
Query: 94 WMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLV 153
S L V ++ V+ D I L+ A++N + G V
Sbjct: 96 --SIPSLLSKVEENGVKPDSI------------------------LFNAMINAFSDSGKV 129
Query: 154 DESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQ-HEKIPDVLLDMKENGVPPDNFSYRI 212
E++ + +KMKE G + +N ++ + G+ HE + + + +++ V P+ +Y I
Sbjct: 130 HEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAMKLLEMMIQDGNVKPNERTYNI 189
Query: 213 CINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK---EKAIIYLKKC 269
I ++ ++EL NV+ +M S + D TY+T+A + G E+ I+ +++
Sbjct: 190 LIQAWCTKNELEEAWNVMHKM-VNSGMQPDIVTYNTLARAFAQNGETDNAERLILKMQQY 248
Query: 270 EDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVK--- 326
+ V ++ G +I Y GN E ++F K K+ + SL+K
Sbjct: 249 NNKVKPNERTCGI--IIRGYCKEGNMTEALRFL----YKMKELGVHPNPVVFNSLIKGYL 302
Query: 327 ----IGELEEAEKMLEEW----ELSCYCY----------------------------DFR 350
+EEA ++EE+ ++ Y D +
Sbjct: 303 DITDTDGVEEALTLMEEFGIKPDVVTYSTIMNAWSSSGLMDNCEEIFDDMVKAEIEPDIQ 362
Query: 351 VPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
+I+ GY + G +KA+A+L + K G ++ I +G+ M+ A
Sbjct: 363 AYSILAKGYVRAGQPDKAEALLNSMTKYGLQANVVIFTTIISGWCAAGKMDCAL 416
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 83/166 (50%), Gaps = 2/166 (1%)
Query: 137 DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
++ G ++ Y +EG + E+L + KMKE+G + + +N ++ Y + + + + L
Sbjct: 256 ERTCGIIIRGYCKEGNMTEALRFLYKMKELGVHPNPVVFNSLIKGYLDITDTDGVEEALT 315
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
M+E G+ PD +Y +N++ + + + E + +M ++ I D YS +A Y+ A
Sbjct: 316 LMEEFGIKPDVVTYSTIMNAWSSSGLMDNCEEIFDDM-VKAEIEPDIQAYSILAKGYVRA 374
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFW 302
G +KA L ++ + + + +IS + + G D ++ +
Sbjct: 375 GQPDKAEALLNSMTKYGLQA-NVVIFTTIISGWCAAGKMDCALRLY 419
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/341 (20%), Positives = 143/341 (41%), Gaps = 41/341 (12%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
++R L +RF+ A V M+ QG + +V +++ + + + + ++ A N + D
Sbjct: 58 LLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGG 117
Query: 135 KVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+ YG+LL+ + G + E++ L +M G + YN ++ ++ G +
Sbjct: 118 HQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAY 177
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
+ +M E G P F+Y ++ + + E ++++ ++M Q V N
Sbjct: 178 RLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQG----------CVPNI 227
Query: 253 YIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMK-FWGLQKIKCKK 311
+ +N+L+ + +G+ E + F ++ + C
Sbjct: 228 FT---------------------------FNNLLDGFCKMGDMVEAHRLFLEMRSLGCPP 260
Query: 312 QLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAV 371
+ Y T++ + G+ EA+++L E S D NI++ GYS+ G ++ A +
Sbjct: 261 DV-VSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKL 319
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
EI K G P S+S I + AF K+ +A
Sbjct: 320 FYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIA 360
>gi|225433712|ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Vitis vinifera]
Length = 746
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/419 (20%), Positives = 175/419 (41%), Gaps = 22/419 (5%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
V++ L+ + AL W+ +G + + + ++++G+ R L +A + S+ +
Sbjct: 98 VLQTLQLIRTPAKALHFFRWVEAKGFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKS 157
Query: 135 KV-----DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHE 189
D+ + +L+ Y GL ES+ + + MKE+G S + +N ++ + G+
Sbjct: 158 GGAVKLGDRFFNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTS 217
Query: 190 KIPDVLLDMKEN-GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYST 248
+ +M + GV PD +++ I I + S + +EM S+ D TY+T
Sbjct: 218 MAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEM-SRFKCDPDVVTYNT 276
Query: 249 VANYYIIAGLKEKAIIYLKKCEDIVSK----SKDALGYNHLISHYASLGNKDEMMKFWGL 304
+ + AG K I + +V K S + + Y LI Y + E +
Sbjct: 277 LVDGLCRAG---KVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAE 333
Query: 305 QKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWEL-SCYCYDFRVPNIILLGYSQKG 363
+ K Y T++ L + +L++ +++LE + D N ++ + G
Sbjct: 334 MVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMG 393
Query: 364 MIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE----ALAVHEENKF 419
+E+A +V +++ + P ++S++ + + +A E E + +H+
Sbjct: 394 KLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVG-- 451
Query: 420 WRPKPSLVSSILDWLGDNRDVEEVE-AFVSSLKIKVQKRNMYHALTEAHIRSGQEVDGL 477
+P + + + ++L N ++ E F +K Q Y L H R G G
Sbjct: 452 CKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPPSYKTLILGHCREGTPEAGF 510
>gi|302798905|ref|XP_002981212.1| hypothetical protein SELMODRAFT_420695 [Selaginella moellendorffii]
gi|300151266|gb|EFJ17913.1| hypothetical protein SELMODRAFT_420695 [Selaginella moellendorffii]
Length = 414
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 83/412 (20%), Positives = 177/412 (42%), Gaps = 47/412 (11%)
Query: 72 LQRVIRQLRSRKRFKHALQVSEWM-SGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSL 130
L VI +LR +F A ++ +WM + DH + L+L+G++ ++ ++ +
Sbjct: 6 LLNVIYKLRITAKFGQAREICDWMIRNKVFEIEESDHVLLLELVGRISKFQATRCFWE-M 64
Query: 131 NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEK 190
E + + Y A+L + R + + M +MK + YN ++ +Y + +K
Sbjct: 65 PAELRSEDAYTAMLQVFARWHAIPAAEDTMSEMKSLNLITRVEPYNIMLDMYKRKNEDDK 124
Query: 191 IPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVA 250
+ + ++ GV PD +Y I + A+ ++ + + E+
Sbjct: 125 VRAMYDELSSLGVAPDAHTYLIVLR---AKQKIGGFDGIEAEVRK--------------- 166
Query: 251 NYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGN-KDEMMKFWGLQKIKC 309
++ L + +++ +C L L+ A++ N + ++K +
Sbjct: 167 --FLDEQLTSRQPLFIYEC---------MLRIYTLLRDLAAIENLRSILLKTF------- 208
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKAD 369
KK + Y +L S ++GE+E AE++ E + + + + ++ Y+ G +EKA+
Sbjct: 209 KKFSSSSYNCLLDSYRQLGEVERAERLFNEIG-NKFTLNIQSYRAMIAVYASNGRMEKAN 267
Query: 370 AVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSS 429
+ K++ + G P + + AGY D + A +A + + PKP ++
Sbjct: 268 ELYKQLFRAGFECHPAIYHAMVAGYIDARDHSNALIQYGKAW---DRSLLGHPKPLRATT 324
Query: 430 --ILDWLGDNRDVEEVEAFVSSLKIKVQKRN--MYHALTEAHIRSGQEVDGL 477
+L L + D E+ V LK + Q + +Y+ L +A+I++ V G
Sbjct: 325 LLVLRVLAEQGDFSRAESIVRDLKRERQGSDVEVYNWLLKAYIKAEVPVFGF 376
>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
Length = 754
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 154/360 (42%), Gaps = 22/360 (6%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y AL++ + +EG VD++ L KM+E G + + Y+ ++ T + +K VL M
Sbjct: 156 YNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMV 215
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
GV P+N +Y I+ Y V +EM S S + D G N ++ A K
Sbjct: 216 GAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEM-SSSLLVPDVGN----CNSFMTALCK 270
Query: 260 EKAIIYLKKCEDIV------SKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQL 313
I K+ DI D + Y L+ YA+ G M + + +
Sbjct: 271 HGRI---KEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPD 327
Query: 314 NRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
+ T++ + ++G ++++ M E+ D + ++ + + G ++ A
Sbjct: 328 RHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFN 387
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDW 433
++ G P +S + G ++ ++ KA E + + L+ P +SI++
Sbjct: 388 HMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLS----KGIPPPCIKFFTSIINN 443
Query: 434 LGDNRDVEEVEAFVSSLKIKVQKRNM--YHALTEAHIRSG--QEVDGLLESMKADDIDED 489
L V E + V + Q+ N+ +++L + + G +E GLL+SM++ ++ D
Sbjct: 444 LCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPD 503
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 80/419 (19%), Positives = 173/419 (41%), Gaps = 26/419 (6%)
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVD--KLYG 141
R K A + + M +G V + L + + FN + E V ++
Sbjct: 273 RIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFN 332
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
L+N Y R G++D+SL + + M + G + ++ ++ + G+ + + M +
Sbjct: 333 TLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDT 392
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
GVPPD Y I R +L + ++ +M S+ ++++ N KE
Sbjct: 393 GVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLC----KEG 448
Query: 262 AIIYLKKCEDIV---SKSKDALGYNHLISHYASLGNKDEMMKFW-GLQKIKCKKQLNRDY 317
+ K D++ + + + +N L+ Y +GN E + ++ + + + Y
Sbjct: 449 RVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDI-YTY 507
Query: 318 ITMLGSLVKIGELEEAEKMLEEW-----ELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
T++ K G +++A + + L+ Y NIIL G Q A +
Sbjct: 508 NTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSY-----NIILHGLFQARRTIVAKEMF 562
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILD 432
E+++ G + ++++ + G N ++A +++ +++ KF ++V +
Sbjct: 563 HEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNV--KFDILTFNIVIRAMF 620
Query: 433 WLGDNRDVEEVEAFVSSLKIKVQKRNMYHALTEAHIR--SGQEVDGLLESMKADDIDED 489
+G ++ +E+ A +S+ + V Y + I+ S ++ D L SM+ D
Sbjct: 621 KVGRRQEAKELFAAISTYGL-VPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPD 678
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 110/252 (43%), Gaps = 4/252 (1%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ +L++ Y G + E++ L+ M+ +G YN ++ Y G+ + + DM
Sbjct: 472 FNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDML 531
Query: 200 ENGVPPDNFSYRICINS-YGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
V + SY I ++ + AR + + E + +ES +S+ TY+TV
Sbjct: 532 HKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIH--TYATVLGGLCRNNC 589
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
++A + L+K + K D L +N +I +G + E + + Y
Sbjct: 590 TDEANMLLEKLFSMNVKF-DILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYR 648
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
M+ +L+K E+A+ + E S D R+ N I+ KG + KA L +I KK
Sbjct: 649 VMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKK 708
Query: 379 GKTPTPNSWSII 390
G P + S++
Sbjct: 709 GILPEATTTSLL 720
>gi|326487476|dbj|BAJ89722.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 805
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 149/350 (42%), Gaps = 19/350 (5%)
Query: 71 ELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSL 130
+L +++ L ++ AL + W +G A D +++ + G E +L
Sbjct: 114 DLPSLLKALELSGHWEWALALLRWARAEGAA----DGPAPFEMVVRALGREGRHDAVCAL 169
Query: 131 NDE------DKVD-KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYT 183
DE ++D + Y +L+ REG + +L L +++ G + + YN ++ +Y
Sbjct: 170 LDEMPLPPGARLDVRAYTTVLHALSREGRYERALRLFDELRREGVAPTRVTYNVVLDVYG 229
Query: 184 NTGQH-EKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMD 242
G+ ++ +L DM+ GV PD F+ I + G + ++++++ H
Sbjct: 230 RMGRSWPRVVALLADMRAAGVEPDGFTASTVIAAAGRDGLVDEAVAFFEDLKARGHAPCV 289
Query: 243 WGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFW 302
TY+ + + AG +A+ L++ ED K DA+ YN L YA G E K
Sbjct: 290 V-TYNALLQVFGKAGNYTEALRVLREMEDAGCK-PDAVTYNELAGSYARAGFYQEAAKCI 347
Query: 303 GLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQK 362
K Y T++ + G+++EA + + + + + N++L +K
Sbjct: 348 DTMIGKGLLPNTFTYNTIMTAYGNAGKVDEALALFDRMKKNGFIPYTNTYNLVLGMLGKK 407
Query: 363 GMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNME----KAFECMK 408
+L E+ + G TP +W+ + A K ME + E MK
Sbjct: 408 SRFAAMLEMLGEMSRSGCTPNRVTWNTLLA-VCGKRGMESYVTRVLEGMK 456
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 123/308 (39%), Gaps = 13/308 (4%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED-KVDKL-YGALLN 145
A+ E + +G A V + L + GK A + D K D + Y L
Sbjct: 273 AVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLREMEDAGCKPDAVTYNELAG 332
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
Y R G E+ + M G + YN IM Y N G+ ++ + MK+NG P
Sbjct: 333 SYARAGFYQEAAKCIDTMIGKGLLPNTFTYNTIMTAYGNAGKVDEALALFDRMKKNGFIP 392
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHIS---MDWGTYSTVANYYIIAGLKEKA 262
+Y + + G +S ++M +L EM S+S + + W T V + +
Sbjct: 393 YTNTYNLVLGMLGKKSRFAAMLEMLGEM-SRSGCTPNRVTWNTLLAVCGKRGMESYVTRV 451
Query: 263 IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLG 322
+ +K C+ V +D YN LI Y G++ K + Y +L
Sbjct: 452 LEGMKSCK--VELCRDT--YNTLICAYGRCGSRANAFKMYDEMTAAGFAPCLTTYNALLN 507
Query: 323 SLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTP 382
L + G+ A ++ + + + + +++L +++ G +A+ KE+ + P
Sbjct: 508 VLSRQGDWTAARSIVSKMKSEGFKPNDMSYSLLLQCHAKGGNAAGIEAIEKEVYQGNIFP 567
Query: 383 TPNSWSII 390
SW I+
Sbjct: 568 ---SWVIL 572
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 146/347 (42%), Gaps = 23/347 (6%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
V+ L + RF L++ MS G + L + GK RG+ES T
Sbjct: 400 VLGMLGKKSRFAAMLEMLGEMSRSGCTPNRVTWNTLLAVCGK-RGMESYVTRVLEGMKSC 458
Query: 135 KVD---KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
KV+ Y L+ Y R G + + +M G YN ++ + + G
Sbjct: 459 KVELCRDTYNTLICAYGRCGSRANAFKMYDEMTAAGFAPCLTTYNALLNVLSRQGDWTAA 518
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
++ MK G P++ SY + + + + +E + +E+ Q +I W T+
Sbjct: 519 RSIVSKMKSEGFKPNDMSYSLLLQCHAKGGNAAGIEAIEKEV-YQGNIFPSWVILRTL-- 575
Query: 252 YYIIAGLKEKAIIYLKKC-EDIVSKS--KDALGYNHLISHYASLGNKDEMMK-FWGLQKI 307
+IA K + + +++ +++ ++ D + N ++S YA G + M+ F ++++
Sbjct: 576 --VIANFKCRRLEGIERAFQEVKARGHKPDLVILNSMLSIYAKNGLYSKAMEMFESIEQL 633
Query: 308 KCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCY---------DFRVPNIILLG 358
L Y +++ K E EAEK+L S D N ++ G
Sbjct: 634 GLSPDLI-TYNSLMDMYAKSNEPWEAEKILNRLRSSQSQQQQQQQQLKPDVVSYNTVING 692
Query: 359 YSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
+ ++G+I++A VL E++ G P ++ + GYA + +A E
Sbjct: 693 FCKEGLIKEAQRVLSEMIADGVAPCVITYHTLVGGYASREMFAEARE 739
>gi|296089633|emb|CBI39452.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/419 (20%), Positives = 175/419 (41%), Gaps = 22/419 (5%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
V++ L+ + AL W+ +G + + + ++++G+ R L +A + S+ +
Sbjct: 98 VLQTLQLIRTPAKALHFFRWVEAKGFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKS 157
Query: 135 KV-----DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHE 189
D+ + +L+ Y GL ES+ + + MKE+G S + +N ++ + G+
Sbjct: 158 GGAVKLGDRFFNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTS 217
Query: 190 KIPDVLLDMKEN-GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYST 248
+ +M + GV PD +++ I I + S + +EM S+ D TY+T
Sbjct: 218 MAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEM-SRFKCDPDVVTYNT 276
Query: 249 VANYYIIAGLKEKAIIYLKKCEDIVSK----SKDALGYNHLISHYASLGNKDEMMKFWGL 304
+ + AG K I + +V K S + + Y LI Y + E +
Sbjct: 277 LVDGLCRAG---KVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAE 333
Query: 305 QKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWEL-SCYCYDFRVPNIILLGYSQKG 363
+ K Y T++ L + +L++ +++LE + D N ++ + G
Sbjct: 334 MVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMG 393
Query: 364 MIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE----ALAVHEENKF 419
+E+A +V +++ + P ++S++ + + +A E E + +H+
Sbjct: 394 KLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVG-- 451
Query: 420 WRPKPSLVSSILDWLGDNRDVEEVE-AFVSSLKIKVQKRNMYHALTEAHIRSGQEVDGL 477
+P + + + ++L N ++ E F +K Q Y L H R G G
Sbjct: 452 CKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPPSYKTLILGHCREGTPEAGF 510
>gi|302801850|ref|XP_002982681.1| hypothetical protein SELMODRAFT_445231 [Selaginella moellendorffii]
gi|300149780|gb|EFJ16434.1| hypothetical protein SELMODRAFT_445231 [Selaginella moellendorffii]
Length = 1208
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 99/467 (21%), Positives = 195/467 (41%), Gaps = 56/467 (11%)
Query: 33 PVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVS 92
P N L+ ++ P +L ++ W+ G +S+ L + +L +R ALQ+
Sbjct: 86 PEQFNRLWKKVE--ASPTRALK-IIHAWISRGNLVSKEALISICHKLCYIRRQIRALQII 142
Query: 93 EWM-SGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREG 151
W+ + + D+A+Q+ L + AE ++ + E K +++ AL+ R
Sbjct: 143 NWIVDDKPFTVTPRDYALQIKLTCRYASPIKAERIYDRVPAELKTEEVSTALIASMSRSN 202
Query: 152 LVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYR 211
++ ++ + +K +A N +M L+ +H ++ + D+ +G P+ +Y
Sbjct: 203 VMLKAEAWHTALK----LNNARACNMMMILFLRRNRHREVLQLYQDLVASGGQPNPLTYL 258
Query: 212 ICI---NSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKK 268
+ N GA I GL+E A LKK
Sbjct: 259 LLFKYRNRIGA-----------------------------------IDGLEEAAEAALKK 283
Query: 269 CEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIG 328
+ K ++A + ++ YA LG D + K W + + R ++ + + +G
Sbjct: 284 IDVHDEKVRNATRSDMMVV-YAYLGKPDMVEKLWSMIHKESWTLAGR-FVAAINAFGILG 341
Query: 329 ELEEAEKMLEEWELSCYCYDFRVPNIILLG-YSQKGMIEKADAVLKEIVKKGKTPTPNSW 387
++ AE +L + L + P ++G Y++ GM+EKA+ +K++ + P +
Sbjct: 342 KISRAEDVLNQ-VLKTRKKAIQKPYCAMIGVYAKHGMMEKAELTMKKLRLELSFPWFAPF 400
Query: 388 SIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFV 447
+ + +GY ++ EKA E ++E + + + P +V ++ RDVE E +
Sbjct: 401 NHLVSGYLARDEPEKALEKLREGMEYVVDKRI-EPDYEMVLGMMPVFASKRDVEGAEKLM 459
Query: 448 SSLKIKVQKRNMYHAL----TEAHIRSGQEVDGLLESMKADDIDEDK 490
S + + +Y+AL EA + G G + K D DE K
Sbjct: 460 SLFGLYGDAK-LYNALLKVYVEAKVSPGPFFLGRMARNKVSDDDETK 505
>gi|357146655|ref|XP_003574066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g13630-like [Brachypodium distachyon]
Length = 795
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 124/267 (46%), Gaps = 7/267 (2%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L++ + G +DE++ L +++ E G + YN ++ Y G ++P ++ M+
Sbjct: 276 YSTLIHGLCKIGFLDEAVDLFERVTEEGMKLETVTYNSLINGYRLLGLTREVPKIIQFMR 335
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G+ PD +Y I I + ++ + ++ Q + ++ TYS + N GL
Sbjct: 336 YQGIEPDIVTYTILIAGHCESGDVEEGMKIRNDILDQG-LQLNIVTYSVLLNALFKKGLV 394
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQL---NRD 316
+A L + I D + Y+ LI Y LG + ++ + + C +++ + +
Sbjct: 395 HEAENLLGEIHSI-GLDMDIIAYSILIHGYCKLGEIERALEVCDV--MCCSQKVVPTSLN 451
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
++++L L K G L EA LE + D + N+++ GY++ G I A + +IV
Sbjct: 452 HLSILVGLCKKGLLVEARWYLENVAVKYQPGDVVLYNVVIDGYAKIGDISNAVGLYDQIV 511
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKA 403
G PT + + I GY +++ A
Sbjct: 512 IAGMFPTIVTCNSILYGYCKCGDLQAA 538
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 60/313 (19%), Positives = 125/313 (39%), Gaps = 39/313 (12%)
Query: 128 NSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQ 187
N + D ++ AL N Y R ++ ++L ++ KM + S Y+ ++
Sbjct: 126 NGFRECDPSSIMWDALANSYARAQMIHDALYVLSKMNSLNMQISVSTYDSLL---YGLRM 182
Query: 188 HEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM---ESQSHISM--- 241
+ ++ +M+ G+ +S+ I I+ + ++ + LQE E + M
Sbjct: 183 TDMALELFEEMEAYGISKSEYSHSIIIDGLCKQDKVGEALSFLQEARKGERFKPLGMSFN 242
Query: 242 -------DWG----------------------TYSTVANYYIIAGLKEKAIIYLKKCEDI 272
+WG TYST+ + G ++A+ ++ +
Sbjct: 243 VLMSALCNWGFIQPAKSFLCLMLKYGLNPDRYTYSTLIHGLCKIGFLDEAVDLFERVTEE 302
Query: 273 VSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEE 332
K + + YN LI+ Y LG E+ K + + + Y ++ + G++EE
Sbjct: 303 GMK-LETVTYNSLINGYRLLGLTREVPKIIQFMRYQGIEPDIVTYTILIAGHCESGDVEE 361
Query: 333 AEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAA 392
K+ + + +++L +KG++ +A+ +L EI G ++SI+
Sbjct: 362 GMKIRNDILDQGLQLNIVTYSVLLNALFKKGLVHEAENLLGEIHSIGLDMDIIAYSILIH 421
Query: 393 GYADKNNMEKAFE 405
GY +E+A E
Sbjct: 422 GYCKLGEIERALE 434
>gi|302794005|ref|XP_002978767.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
gi|300153576|gb|EFJ20214.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
Length = 521
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 108/272 (39%), Gaps = 34/272 (12%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ AL+N + R+GL E+ K++E YN +M Y+ G ++ M+
Sbjct: 247 FTALMNAFARQGLYREAERYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTMQ 306
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
NG PD S+ I IN+YG E + + M+S + S + + + + Y AG
Sbjct: 307 RNGCFPDTVSHNILINAYGRAGLYEDAEKIFKSMQS-AGFSPNLKSNMLLLSAYARAGRV 365
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
E+A + E +K D L YN LI+ Y G ++M KQ D I
Sbjct: 366 EEAEELVSAMERDGTKP-DTLIYNALINAYGVSGRHEDMEALLAKMVKSSSKQTKPD-IG 423
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
+L+++ Y+Q G I KA+ + + + +
Sbjct: 424 TYNTLIQV-------------------------------YAQAGFIPKAEELFQGLARLK 452
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
P +W+ + GYA K K +K+ L
Sbjct: 453 LVPDATTWTALMGGYAKKKLYRKCTSILKKML 484
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 134/325 (41%), Gaps = 39/325 (12%)
Query: 175 YNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEME 234
YN ++ Y + E M+E P+ ++ + IN Y E + +M+
Sbjct: 107 YNLLIDAYGKSLNIEDAEKTFNRMQEALCVPNEETFGVLINGYRLAGSFEKAEELFVQMQ 166
Query: 235 SQSHISMDWGTYSTVANYYIIAGLKE--KAIIYLK-----KCEDIVSKSKDALGYNHLIS 287
+ + G + +++ KE +A + +CE + YN +I
Sbjct: 167 KRGYSP---GPLACNTFLHVLEDAKEYRRAEALFRDLEKYECEPNIDT------YNRMIV 217
Query: 288 HYASLG--NKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCY 345
Y G +K EM+ + +++ C + + ++ + + G EAE+ ++ + Y
Sbjct: 218 IYGKAGEPSKAEML-YRSMRRAMCPPNIC-TFTALMNAFARQGLYREAERYFDKLQEFDY 275
Query: 346 CYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKN---NMEK 402
D N ++ YSQ G A + + + + G P S +I+ Y + EK
Sbjct: 276 KPDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVSHNILINAYGRAGLYEDAEK 335
Query: 403 AFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNR--DVEEVEAFVSSLKIKVQKRN-- 458
F+ M+ A F P+L S++L R VEE E VS+++ K +
Sbjct: 336 IFKSMQSA-------GF---SPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKPDTL 385
Query: 459 MYHALTEAHIRSG--QEVDGLLESM 481
+Y+AL A+ SG ++++ LL M
Sbjct: 386 IYNALINAYGVSGRHEDMEALLAKM 410
>gi|302826107|ref|XP_002994593.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
gi|300137364|gb|EFJ04344.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
Length = 521
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 107/243 (44%), Gaps = 5/243 (2%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ AL+N + R+GL E+ K++E YN +M Y+ G ++ M+
Sbjct: 247 FTALMNAFARQGLYREAERYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTMQ 306
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
NG PD S+ I IN+YG E + + M+S + S + + + + Y AG
Sbjct: 307 RNGCFPDTVSHNILINAYGRAGLYEDAEKIFKSMQS-AGFSPNLKSNMLLLSAYARAGRV 365
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD--- 316
E+A + E +K D L YN LI+ Y G ++M KQ D
Sbjct: 366 EEAEELVSAMERDGTKP-DTLIYNSLINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGT 424
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y T++ + G + AE++ + D ++ GY++K + K ++LK+++
Sbjct: 425 YNTLIQVYAQAGFIPRAEELFQGLARLKLVPDATTWTALMGGYAKKKLYRKCTSILKKML 484
Query: 377 KKG 379
+ G
Sbjct: 485 ESG 487
Score = 41.6 bits (96), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 134/325 (41%), Gaps = 39/325 (12%)
Query: 175 YNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEME 234
YN ++ Y + E M+E P+ ++ + IN Y E + +M+
Sbjct: 107 YNLLIDAYGKSLNIEDAEKTFNRMQEALCVPNEETFGVLINGYRLAGSFEKAEELFVQMQ 166
Query: 235 SQSHISMDWGTYSTVANYYIIAGLKE--KAIIYLK-----KCEDIVSKSKDALGYNHLIS 287
+ + G + +++ KE +A + +CE + YN +I
Sbjct: 167 KRGYSP---GPLACNTFLHVLEDAKEYRRAEALFRDLEKYECEPNIDT------YNRMIV 217
Query: 288 HYASLG--NKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCY 345
Y G +K EM+ + +++ C + + ++ + + G EAE+ ++ + Y
Sbjct: 218 IYGKAGEPSKAEML-YRSMRRAMCPPNIC-TFTALMNAFARQGLYREAERYFDKLQEFDY 275
Query: 346 CYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKN---NMEK 402
D N ++ YSQ G A + + + + G P S +I+ Y + EK
Sbjct: 276 KPDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVSHNILINAYGRAGLYEDAEK 335
Query: 403 AFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNR--DVEEVEAFVSSLKIKVQKRN-- 458
F+ M+ A F P+L S++L R VEE E VS+++ K +
Sbjct: 336 IFKSMQSA-------GF---SPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKPDTL 385
Query: 459 MYHALTEAHIRSG--QEVDGLLESM 481
+Y++L A+ SG ++++ LL M
Sbjct: 386 IYNSLINAYGVSGRHEDMEALLAKM 410
>gi|255660872|gb|ACU25605.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 484
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 92/432 (21%), Positives = 183/432 (42%), Gaps = 32/432 (7%)
Query: 79 LRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAETYFNSLN------ 131
L S +HALQ W+ L + H ++++G+ L A +
Sbjct: 19 LHSSNTXEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEW 78
Query: 132 DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
DED ++ +++ Y +EG+V ES+ + QKM+E+ + +YN + + G++
Sbjct: 79 DED----MWVMMIDSYGKEGIVQESVKMFQKMEELXVERTIKSYNALFKVILRRGRYMMA 134
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
M G+ P ++ + I + ++ + ++M+S+ IS D TY+T+ N
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE-ISPDVVTYNTMIN 193
Query: 252 -YYIIAGLKEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
YY + ++E +++ K +I + Y LI Y S+ D+ ++ K
Sbjct: 194 GYYRVKKMEEAEKYFVEMKGRNI---EPTVVTYTTLIKGYVSVDQVDDALRLVZEMKGXG 250
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYC--YDFRVPNIILLGYSQKGMIEK 367
K Y T+L L ++ EA +L+E + Y D + ++ + + G ++
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARVJLKEM-MDKYLAPTDNSIFMRLIXSHCKSGNLDA 309
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPK---- 423
A VLK +++ + + +KA + + + + E++ RP+
Sbjct: 310 AADVLKAMIRLSVPTEAGHXGXLIENFCKVGQYDKAVKLLDKLI---EKDIILRPQSTLH 366
Query: 424 --PSLVSSILDWLGDNRDVEEVEAFVSSL-KIKVQKRNMYHALTEAHIRSGQEVDG--LL 478
PS + ++++L +N + E V L K+ VQ + L H + G LL
Sbjct: 367 LEPSAYNPMIEYLCNNGQAXKAETLVRQLXKLGVQDPTALNTLIRGHSQEGSPDSAFELL 426
Query: 479 ESMKADDIDEDK 490
+ M +D +K
Sbjct: 427 KIMLRRKVDSEK 438
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 83/392 (21%), Positives = 161/392 (41%), Gaps = 34/392 (8%)
Query: 65 QKISELELQRVIRQLRS-------RKRFKHALQVSEWMSGQGLAFSVHDHAVQL---DLI 114
QK+ EL ++R I+ + R R+ A + M +G+ + H V + L
Sbjct: 104 QKMEELXVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLS 163
Query: 115 GKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
GKV E+A +F + + + Y ++N Y R ++E+ +MK +
Sbjct: 164 GKV---ETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTV 220
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQE 232
+ Y ++ Y + Q + ++ +MK G+ P+ +Y + ++S +L+E
Sbjct: 221 VTYTTLIKGYVSVDQVDDALRLVZEMKGXGIKPNAITYSTLLPGLCNAEKMSEARVJLKE 280
Query: 233 MESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASL 292
M + D + + + +G + A LK + S +A LI ++ +
Sbjct: 281 MMDKYLAPTDNSIFMRLIXSHCKSGNLDAAADVLKAMIRL-SVPTEAGHXGXLIENFCKV 339
Query: 293 GNKDEMMKFWGLQKIKCKKQLNRD----------YITMLGSLVKIGELEEAEKMLEEWEL 342
G D+ +K L K+ K + R Y M+ L G+ +AE ++ +
Sbjct: 340 GQYDKAVKL--LDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQAXKAETLVRQLX- 396
Query: 343 SCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEK 402
D N ++ G+SQ+G + A +LK ++++ +++ + Y KN
Sbjct: 397 KLGVQDPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKXAYNSLVQSYLKKNEPXD 456
Query: 403 AFECMKEALAVHEENKFWRPKPSLVSSILDWL 434
A K AL EN P +L S+++ L
Sbjct: 457 A----KAALDSMIENDHL-PDSALFRSVMESL 483
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 89/414 (21%), Positives = 176/414 (42%), Gaps = 29/414 (7%)
Query: 86 KHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLN 145
+ AL+V M +G+ S+ ++ + +GK R +E+ + +Y +
Sbjct: 209 REALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTIC 268
Query: 146 CYV--REGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
+ R G +DE+ ++++M + G + Y ++ N G+ ++ L MK +
Sbjct: 269 IRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSH 328
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAI 263
PD +Y ++ + +L +++ EME+ ++ D T++ + + G ++A
Sbjct: 329 KPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLP-DVVTFTILIDALCKVGKVDEAF 387
Query: 264 IYLKKCEDIVSKSKDALG---YNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITM 320
L D++ K A YN LI L DE ++ + + + YI
Sbjct: 388 GTL----DVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILF 443
Query: 321 LGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNII-----LLGYSQKGMIEKADAVLKEI 375
+ K GE +A K E+ + + VPNI+ L +++G +E+A +
Sbjct: 444 IDYYGKSGESGKAIKTFEKMKTNGI-----VPNIVACNASLYSLAEQGRLEEAKEFFNGL 498
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLG 435
K G P +++I+ Y ++ A + + E EEN P+ +++S++D L
Sbjct: 499 KKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEM----EENG-CDPEVVIINSLIDTLY 553
Query: 436 DNRDVEEVEAFVSSLK-IKVQKRNM-YHALTEAHIRSG--QEVDGLLESMKADD 485
V+E +K +K+ + Y+ L + G QE L + M ADD
Sbjct: 554 KADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADD 607
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 117/259 (45%), Gaps = 3/259 (1%)
Query: 147 YVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPD 206
Y+R GL + ++L +KM+++G + +Y G++ L +G + V M G+ P
Sbjct: 168 YIRGGLREAPVAL-EKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPS 226
Query: 207 NFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYL 266
+Y + + G R ++ ++ +LQEMES + + T++ AG ++A L
Sbjct: 227 LKTYSALMVALGKRRDIETVMGLLQEMESLG-LRPNIYTFTICIRILGRAGKIDEAYGIL 285
Query: 267 KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVK 326
K+ +D D + Y LI + G + + + K K YIT+L
Sbjct: 286 KRMDD-AGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSD 344
Query: 327 IGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNS 386
G+L+ ++ E E Y D I++ + G +++A L + K+G P ++
Sbjct: 345 HGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHT 404
Query: 387 WSIIAAGYADKNNMEKAFE 405
++ + G N +++A E
Sbjct: 405 YNTLICGLLRLNRLDEALE 423
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 108/244 (44%), Gaps = 4/244 (1%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +L++ ++ L + + L KMK G YN + +G+ +++ D+ +M
Sbjct: 791 YNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEML 850
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G P+ ++ I I + L ++ ++ S W TY + + + G
Sbjct: 851 FRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPW-TYGPLIDGLLKLGRL 909
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMK-FWGLQKIKCKKQLNRDYI 318
E+A + ++ D L YN L++ + G+ + + F + K + L + Y
Sbjct: 910 EEAKQFFEEMLDYGCMPNCPL-YNILMNGFGKQGDVETACELFRRMVKEGIRPDL-KSYS 967
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
M+ L +G++++A EE +LS D N+++ G + +E+A ++ E+ +
Sbjct: 968 IMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNR 1027
Query: 379 GKTP 382
G TP
Sbjct: 1028 GITP 1031
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 89/190 (46%), Gaps = 8/190 (4%)
Query: 111 LDLIGKVRGLESAETYFNSLNDEDKVDK--LYGALLNCYVREGLVDESLSLMQKMKEMGS 168
+D + K+ LE A+ +F + D + LY L+N + ++G V+ + L ++M + G
Sbjct: 900 IDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGI 959
Query: 169 FGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMEN 228
+Y+ ++ G+ + ++K +G+ PD Y + IN G + +
Sbjct: 960 RPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALS 1019
Query: 229 VLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS--KDALGYNHLI 286
+ EM ++ I+ D TY+ + IAG+ E+A K E++ K + YN LI
Sbjct: 1020 LFDEMRNRG-ITPDLYTYNALILNLGIAGMVEEAG---KMYEELQLKGLEPNVFTYNALI 1075
Query: 287 SHYASLGNKD 296
++ GN D
Sbjct: 1076 RGHSMSGNPD 1085
>gi|302781402|ref|XP_002972475.1| hypothetical protein SELMODRAFT_97561 [Selaginella moellendorffii]
gi|300159942|gb|EFJ26561.1| hypothetical protein SELMODRAFT_97561 [Selaginella moellendorffii]
Length = 406
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 126/270 (46%), Gaps = 12/270 (4%)
Query: 125 TYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTN 184
+Y D D+ Y AL+N + + + +L L+++M G + +N +M ++
Sbjct: 107 SYMKKYCDPDEFT--YAALINGFCKCMDTEVTLELLEEMLARGLRPNLALFNMMMDAHSR 164
Query: 185 TGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQ---EMESQSHISM 241
+G+HE++ + M E+ PD SYR+ + ++ + +Q + E+ H+
Sbjct: 165 SGKHEQVIALFERMVEHECRPDPKSYRVLVEAFAVSGRIDEAFGFVQRYADSENAPHL-- 222
Query: 242 DWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKF 301
G Y+T+ N A A+ K +D + D + YN LI +G DE
Sbjct: 223 --GAYNTLMNRLGKANKAHAALEIFYKIKDRPNYKPDLVTYNVLIDLLGKVGKIDECWSC 280
Query: 302 WGLQKIKCKKQLN-RDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYS 360
+ QK++ Q + Y T+LG L + G ++ +L++ D I++ GY+
Sbjct: 281 Y--QKMRLHFQPDIFSYNTLLGRLGRAGRVDLFASVLDDMSRDGVQQDRITYAILVEGYA 338
Query: 361 QKGMIEKADAVLKEIVKKGKTPTPNSWSII 390
+ G ++ A A L+E+ G +PTP++ ++
Sbjct: 339 RAGNLDVALAYLEEMKSSGFSPTPSALEVL 368
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 89/216 (41%), Gaps = 15/216 (6%)
Query: 195 LLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYI 254
+L M+E +P +YRI + Y S + +ME S I Y +YI
Sbjct: 1 MLGMEEQMIPMTYVTYRILLRIYVDASMVEDALETFHKMEF-SEIKPTLDDY-----HYI 54
Query: 255 IAGL------KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIK 308
+ L + +I+ +++V + YN LIS SLG E + K
Sbjct: 55 MFKLIRLKCPRVVPMIFESMRKNLVRPNTQT--YNFLISSLCSLGKMAEARWRFSYMKKY 112
Query: 309 CKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKA 368
C Y ++ K + E ++LEE + + N+++ +S+ G E+
Sbjct: 113 CDPD-EFTYAALINGFCKCMDTEVTLELLEEMLARGLRPNLALFNMMMDAHSRSGKHEQV 171
Query: 369 DAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
A+ + +V+ P P S+ ++ +A +++AF
Sbjct: 172 IALFERMVEHECRPDPKSYRVLVEAFAVSGRIDEAF 207
>gi|255660944|gb|ACU25641.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 481
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 91/424 (21%), Positives = 175/424 (41%), Gaps = 35/424 (8%)
Query: 79 LRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAETYFNSLN------ 131
L K +HALQ W+ L + H ++++G+ L A +
Sbjct: 19 LHGAKNSEHALQFFRWVERSNLFXHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEW 78
Query: 132 DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
DED L+ +++ Y + G+V ES+ + QKM+E+G + +Y+ + + G++
Sbjct: 79 DED----LWVLMIDSYGKAGIVQESVKMFQKMEELGVXRTIKSYDALFKVILRRGRYMMA 134
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
M G+ P ++ + I + ++ + +M S+ I+ D TY+T+ N
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETSNRFFXDMXSR-EITPDVVTYNTMIN 193
Query: 252 -YYIIAGLKEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
YY + ++E +++ K +I + Y LI Y S+ D+ + K
Sbjct: 194 GYYRVBKMEEXEKYFVEMKGRNI---EPTVVTYTTLIKGYXSVDRVDBALXLXEEMKXFG 250
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL----GYSQKGMI 365
K Y T+L L ++ EA +L+E Y N I + G + G +
Sbjct: 251 IKPNAITYSTLLPGLCDAEKMSEARSILKEM---VXKYXAPTDNSIFMRLISGQCKVGDL 307
Query: 366 EKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPK-- 423
+ A VJK +++ + ++ Y +KA + + + + E++ RP+
Sbjct: 308 DAAADVJKAMIRLSIPTEAGHYGVLIEXYCKAGQYDKAVKLLDKVI---EKDIISRPQNT 364
Query: 424 ----PSLVSSILDWLGDNRDVEEVEAFVSSL-KIKVQKRNMYHALTEAHIRSGQEVDGLL 478
PS + ++++L +N + E V L K+ VQ + L H G D
Sbjct: 365 LXMEPSAYNXLIEYLCNNGQTAKAETLVRZLMKLGVQDPTALNTLIRGHSXEGSP-DSAF 423
Query: 479 ESMK 482
E +K
Sbjct: 424 ELLK 427
>gi|255557937|ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540761|gb|EEF42321.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1429
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 101/461 (21%), Positives = 203/461 (44%), Gaps = 68/461 (14%)
Query: 42 RISPLGDPDVSLTPVLDQWVLEGQKISELELQRV----IRQLRSRKRFKHALQVSEWMSG 97
R+ L D + L P DQ+V + S++++ + + ++ ++ AL+V EW++
Sbjct: 111 RVKFLTDRILGLRP--DQFVADVLDDSKVQMTPTDFCFVVKWVGQENWQRALEVFEWLNL 168
Query: 98 QG-LAFSVHDHAVQLDLIGKV-RGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDE 155
+ + + A L ++GK + + E + + + D ++Y A++ Y R G ++
Sbjct: 169 RHWYSPNARMLATILAVLGKANQEALAVEIFIRAESTVDNTVQVYNAMMGVYARTGRFNK 228
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM----KENGVPPDNFSYR 211
++ M+E G +++N ++ G P+V +++ + +G+ PD +Y
Sbjct: 229 VQGMLDLMRERGCEPDLVSFNTLINARLKAGAM--TPNVAIELLNEVRRSGLRPDIITYN 286
Query: 212 ICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCED 271
I++ S L V +ME+ + D TY+ + + Y G KA K+ E
Sbjct: 287 TLISACSRESNLEEAVKVFDDMEAH-YCQPDLWTYNAMISVYGRCGFSGKAEQLFKELE- 344
Query: 272 IVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI-------TMLG 322
SK DA+ YN L+ +A GN D++ + C + + +I T++
Sbjct: 345 --SKGYFPDAVTYNSLLYAFAREGNVDKVKEI-------CNEMVQMGFIRDEMTYNTIIH 395
Query: 323 SLVKIGELEEAEKMLEEWELSCYCYDFRVPNIIL--LGYSQKGMIEKADAVLKEIVKKGK 380
K G+ A ++ + +LS D +++ LG + K M+E A+ V+ E++ G
Sbjct: 396 MYGKQGQHGLALQLYRDMKLSGRTPDAITYTVLIDSLGKANK-MVEAAN-VMSEMLNIGV 453
Query: 381 TPTPNSWSIIAAGYA---DKNNMEKAFECMKEA----------------LAVHEENK--- 418
PT ++S + GYA + E+ F+CM+ + L E K
Sbjct: 454 KPTLRTYSALICGYARAGQRLEAEETFDCMRRSGIRPDQLAYSVMLDVFLRFDEATKAMM 513
Query: 419 FWR--------PKPSLVSSILDWLGDNRDVEEVEAFVSSLK 451
+R P P++ ++L LG VE+++ + ++
Sbjct: 514 LYREMVRDGITPDPTVYGAMLRNLGRENKVEDIQRIIRDME 554
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 106/225 (47%), Gaps = 14/225 (6%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +LL + REG VD+ + +M +MG + YN I+ +Y GQH + DMK
Sbjct: 355 YNSLLYAFAREGNVDKVKEICNEMVQMGFIRDEMTYNTIIHMYGKQGQHGLALQLYRDMK 414
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+G PD +Y + I+S G +++ NV+ EM + + TYS + Y AG +
Sbjct: 415 LSGRTPDAITYTVLIDSLGKANKMVEAANVMSEMLNIG-VKPTLRTYSALICGYARAGQR 473
Query: 260 EKAIIYLKKCEDIVSKS---KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
+A ++ D + +S D L Y+ ++ + DE K L + + + D
Sbjct: 474 LEA----EETFDCMRRSGIRPDQLAYSVMLDVFLRF---DEATKAMMLYREMVRDGITPD 526
Query: 317 ---YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLG 358
Y ML +L + ++E+ ++++ + E C + +I++ G
Sbjct: 527 PTVYGAMLRNLGRENKVEDIQRIIRDMEEVCGMNPQAIASILVKG 571
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 124/296 (41%), Gaps = 16/296 (5%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L++ RE ++E++ + M+ YN ++ +Y G K + +++
Sbjct: 285 YNTLISACSRESNLEEAVKVFDDMEAHYCQPDLWTYNAMISVYGRCGFSGKAEQLFKELE 344
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G PD +Y + ++ + ++ + EM I D TY+T+ + Y G +
Sbjct: 345 SKGYFPDAVTYNSLLYAFAREGNVDKVKEICNEMVQMGFIR-DEMTYNTIIHMYGKQG-Q 402
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQK----IKCKKQLNR 315
+ L + + ++ DA+ Y LI SLG ++M++ + I K L R
Sbjct: 403 HGLALQLYRDMKLSGRTPDAITYTVLID---SLGKANKMVEAANVMSEMLNIGVKPTL-R 458
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
Y ++ + G+ EAE+ + S D +++L + + KA + +E+
Sbjct: 459 TYSALICGYARAGQRLEAEETFDCMRRSGIRPDQLAYSVMLDVFLRFDEATKAMMLYREM 518
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSIL 431
V+ G TP P + + +N +E +++ V N P ++SIL
Sbjct: 519 VRDGITPDPTVYGAMLRNLGRENKVEDIQRIIRDMEEVCGMN------PQAIASIL 568
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 133 EDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
E K+D Y +L+ + ++ LV ++ L +++ GS Y+ +M +Y N+G H K
Sbjct: 977 EPKLDT-YKSLIAAFGKQQLVVDAEELFEELLSKGSKLDRSFYHIMMKIYRNSGNHSKAE 1035
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
+L MK+ GV P + + + SYG+ + E VL ++ +S+ YS+V +
Sbjct: 1036 KLLSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLTNLKEMG-LSLSTLPYSSVIDA 1094
Query: 253 YIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLI 286
Y LK K Y + +V K+ L +H I
Sbjct: 1095 Y----LKNKD--YSVGIQKLVEMKKEGLEPDHRI 1122
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 120/288 (41%), Gaps = 10/288 (3%)
Query: 121 ESAETYFNSL---NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNG 177
E A FN++ VD + G LL + +G ++E + Q++++MG S +
Sbjct: 787 EQARAVFNTMMRDGPSPTVDSING-LLQALIVDGRLEELYVVTQEIQDMGFQISKSSILL 845
Query: 178 IMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS 237
I+ + + + MK G P YRI I + +E ++ EME ++
Sbjct: 846 ILDAFARVSNIAEAKKIYQGMKAAGYFPTMHLYRIMIGLLCKGKRVRDVEAMVTEME-EA 904
Query: 238 HISMDWGTYSTVANYYI-IAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKD 296
D ++++ Y I ++ IY + ED + +D YN LI Y +
Sbjct: 905 GFRPDLSIWNSMLRLYTGIDDFRKTVQIYQRIKEDGLQPDEDT--YNTLIVMYCRDHRPE 962
Query: 297 EMMKFWG-LQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNII 355
E +++I + +L+ Y +++ + K + +AE++ EE D +I+
Sbjct: 963 EGCSLMHEMRRIGLEPKLD-TYKSLIAAFGKQQLVVDAEELFEELLSKGSKLDRSFYHIM 1021
Query: 356 LLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
+ Y G KA+ +L + G PT + ++ Y ++A
Sbjct: 1022 MKIYRNSGNHSKAEKLLSMMKDAGVEPTIATMHLLMVSYGSSGQPQEA 1069
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 104/245 (42%), Gaps = 16/245 (6%)
Query: 64 GQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESA 123
G +IS+ + ++ A ++ + M G ++H + + + L+ K + +
Sbjct: 835 GFQISKSSILLILDAFARVSNIAEAKKIYQGMKAAGYFPTMHLYRIMIGLLCKGKRVRDV 894
Query: 124 ETYFNSLNDED-KVD-KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCL 181
E + + + D ++ ++L Y +++ + Q++KE G YN ++ +
Sbjct: 895 EAMVTEMEEAGFRPDLSIWNSMLRLYTGIDDFRKTVQIYQRIKEDGLQPDEDTYNTLIVM 954
Query: 182 YTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISM 241
Y + E+ ++ +M+ G+ P +Y+ I ++G + + E + +E+ S+ +
Sbjct: 955 YCRDHRPEEGCSLMHEMRRIGLEPKLDTYKSLIAAFGKQQLVVDAEELFEELLSKGS-KL 1013
Query: 242 DWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDA-----LGYNHLI-SHYASLGNK 295
D Y + Y +G KA E ++S KDA + HL+ Y S G
Sbjct: 1014 DRSFYHIMMKIYRNSGNHSKA-------EKLLSMMKDAGVEPTIATMHLLMVSYGSSGQP 1066
Query: 296 DEMMK 300
E K
Sbjct: 1067 QEAEK 1071
>gi|356575482|ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Glycine max]
Length = 576
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 115/275 (41%), Gaps = 43/275 (15%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y AL+N + REGL +++ + ++M+E G YN +M Y+ G ++ M+
Sbjct: 298 YTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQ 357
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G PD SY I +++YG E V ++M+ G T+ ++ ++
Sbjct: 358 HMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRV-------GITPTMKSHMVLLSAY 410
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD-YI 318
K + + KCE+I+++ CK L D Y+
Sbjct: 411 SK-MGSVNKCEEILNQ--------------------------------MCKSGLKLDTYV 437
Query: 319 --TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
+ML ++G+ + E++L E Y D NI++ Y Q G IE+ + + + +
Sbjct: 438 LNSMLNLYGRLGQFGKMEEVLRVMEKGSYVADISTYNILINRYGQAGFIERMEDLFQLLP 497
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
KG P +W+ Y+ K K E +E +
Sbjct: 498 SKGLKPDVVTWTSRIGAYSKKKLYLKCLEIFEEMI 532
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 139/334 (41%), Gaps = 22/334 (6%)
Query: 53 LTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLD 112
L P LD W ++ V QLR RK++ + + W+ L S + +
Sbjct: 112 LPPTLDAWD---------DIFTVAVQLRMRKQWDSIISICRWIL---LRSSFKPDVICYN 159
Query: 113 LIGKVRGL-----ESAETYFNSLNDED-KVDKLYGALLNCYVREGLVDESLSLMQKMKEM 166
L+ + G E+ TY L + Y L+ Y GL++++ ++ +M+
Sbjct: 160 LLIEAFGQKLLYKEAESTYLQLLEARCIPTEDTYALLIKAYCISGLLEKAEAVFAEMRNY 219
Query: 167 GSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSM 226
G SA+ YN + G +K ++ MK++ P +Y + IN YG +
Sbjct: 220 GLPSSAVVYNAYINGLMKGGNSDKAEEIFKRMKKDACKPTTETYTMLINLYGKAGKSFMA 279
Query: 227 ENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLI 286
+ EM S + TY+ + N + GL EKA ++ ++ D YN L+
Sbjct: 280 LKLFHEMMSHD-CKPNICTYTALVNAFAREGLCEKAEEVFEQMQE-AGLEPDVYAYNALM 337
Query: 287 SHYASLGNKDEMMKFWGL-QKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCY 345
Y+ G + + L Q + C+ Y ++ + K G ++AE + ++ +
Sbjct: 338 EAYSRAGYPYGAAEIFSLMQHMGCEPD-RASYNILVDAYGKAGFQDDAEAVFKDMKRVGI 396
Query: 346 CYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
+ ++L YS+ G + K + +L ++ K G
Sbjct: 397 TPTMKSHMVLLSAYSKMGSVNKCEEILNQMCKSG 430
>gi|255660930|gb|ACU25634.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 484
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 92/432 (21%), Positives = 184/432 (42%), Gaps = 32/432 (7%)
Query: 79 LRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLI---GKVRGLESAETYFNSLN---- 131
L K +HALQ W+ L H+ + L +I G+ L A +
Sbjct: 19 LHGAKNAEHALQFFRWVERSNLL--EHNREIHLKIIEILGRASKLNHARCILLDMPKKGL 76
Query: 132 --DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHE 189
DED ++ +++ Y + G+V ES+ L QKM+E+G + +Y+ + + + G++
Sbjct: 77 EWDED----MWVMMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVISRRGRYM 132
Query: 190 KIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTV 249
M G+ P ++ + I + ++ + ++M+S+ I+ D TY+T+
Sbjct: 133 MSKRYFNKMVNEGIEPTRHTFNVLIWGFFLSGKVETANRFFEDMKSR-EITPDVITYNTM 191
Query: 250 AN-YYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIK 308
N Y + ++E +L+ E + + + Y LI YAS+ D+ ++ K
Sbjct: 192 INGYNRVKKMEEAEKYFLEMKERKIDPT--VVTYTTLIKGYASVDRVDDALRLVEEMKGL 249
Query: 309 CKKQLNRDYITMLGSLVKIGELEEAEKMLEEW-ELSCYCYDFRVPNIILLGYSQKGMIEK 367
K Y T+L L ++ EA +L+E + D + ++ + G ++
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYVAPTDNSIFMRLISSQCKAGNLDA 309
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSL- 426
A VLK +++ + ++ Y +KA + + + + E++ RP+ +L
Sbjct: 310 AADVLKAMIRLSVPTEAGHYGVLIEYYCKAGQYDKAVKLLDKLI---EKDIILRPQSTLH 366
Query: 427 -----VSSILDWLGDNRDVEEVEAFVSSL-KIKVQKRNMYHALTEAHIRSGQEVDG--LL 478
+ ++++L +N + E V L K+ VQ + L H + G LL
Sbjct: 367 MELSAYNPLIEYLCNNGQTAKAETLVRQLMKLGVQDPTSLNTLIRGHSQEGSPDSAFELL 426
Query: 479 ESMKADDIDEDK 490
+ M +D +K
Sbjct: 427 KIMLRRKVDSEK 438
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 142/330 (43%), Gaps = 54/330 (16%)
Query: 116 KVRGLESAETYFNSLNDEDKVDKL---YGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
+V+ +E AE YF + E K+D Y L+ Y VD++L L+++MK +G +A
Sbjct: 197 RVKKMEEAEKYFLEMK-ERKIDPTVVTYTTLIKGYASVDRVDDALRLVEEMKGLGIKPNA 255
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP-DNFSYRICINSYGARSELSSMENVLQ 231
+ Y+ ++ N + + +L +M + V P DN + I+S L + +VL+
Sbjct: 256 ITYSTLLPGLCNAEKMSEARSILKEMVDKYVAPTDNSIFMRLISSQCKAGNLDAAADVLK 315
Query: 232 EMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC--EDIVSKSKDAL-----GYNH 284
M S + + G Y + YY AG +KA+ L K +DI+ + + L YN
Sbjct: 316 AMIRLS-VPTEAGHYGVLIEYYCKAGQYDKAVKLLDKLIEKDIILRPQSTLHMELSAYNP 374
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSC 344
LI + + G Q K + T++ L+K+G
Sbjct: 375 LIEYLCNNG-----------QTAKAE--------TLVRQLMKLG---------------- 399
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
D N ++ G+SQ+G + A +LK ++++ +++ + Y KN A
Sbjct: 400 -VQDPTSLNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKKNEPADA- 457
Query: 405 ECMKEALAVHEENKFWRPKPSLVSSILDWL 434
K AL EN P SL S+++ L
Sbjct: 458 ---KAALDSMIENDHL-PDSSLFRSVMESL 483
>gi|224056475|ref|XP_002298874.1| predicted protein [Populus trichocarpa]
gi|222846132|gb|EEE83679.1| predicted protein [Populus trichocarpa]
Length = 948
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 159/359 (44%), Gaps = 22/359 (6%)
Query: 85 FKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVD--KLYGA 142
F+ AL++ + M +GL ++ L + K+ + A++ + V + Y A
Sbjct: 131 FEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVVGYRAYTA 190
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
+++ + GL+DESL L+ M + G+ + ++ ++ + G+ + +V+ M + G
Sbjct: 191 MIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKMFKAG 250
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
+ P+ Y I + + +++ M H +D+ + + + AG +A
Sbjct: 251 LAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGH-DVDYFICNVLISSLCRAGRVAEA 309
Query: 263 IIYLKKCEDIVSKSKDALGYNHLISHYASLGNK-------DEMMKFWGLQKIKCKKQLNR 315
+++ I + +++ ++ +I+ Y LG+ DEM+K C
Sbjct: 310 EDFMRHMSTI-DLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLG-----HCPSHFT- 362
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
Y ++L L K G L EA+K+L + D + N IL ++G + A A+ E+
Sbjct: 363 -YGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEM 421
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWL 434
V+ P ++++II AG + K M A ++ALA P + +S+ D L
Sbjct: 422 VQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALA----RGTLSPNKVMYTSLFDGL 476
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/246 (19%), Positives = 117/246 (47%), Gaps = 8/246 (3%)
Query: 163 MKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSE 222
M+ G + + YN I+ G+++ D++ M+ G+ D +Y + I+ +
Sbjct: 1 MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNR 60
Query: 223 LSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCED---IVSKSKDA 279
+ +L++M + I+ + TY+T+ N +KE+ I + + +++ S +
Sbjct: 61 SAKGYLLLKKMRKR-MIAPNEFTYNTLIN----GLMKERKIGGATRVFNEMLMLNLSPNR 115
Query: 280 LGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEE 339
+ YN LI + GN ++ ++ + + K + +Y +L L K+ + + A+ ++E
Sbjct: 116 VTYNILIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMER 175
Query: 340 WELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNN 399
+S +R ++ G + G+++++ +L + K G +P ++S++ G+
Sbjct: 176 IRMSGMVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGK 235
Query: 400 MEKAFE 405
++ A E
Sbjct: 236 IKNAKE 241
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 117/274 (42%), Gaps = 25/274 (9%)
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
L++ R G V E+ M+ M + +++ ++ I+ Y G K + +M +
Sbjct: 295 VLISSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKL 354
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHI--SMDWGTYSTVANYYIIAGLK 259
G P +F+Y + L + +L ++ HI ++D Y+T+ + G
Sbjct: 355 GHCPSHFTYGSLLKGLCKGGNLREAKKLLYKLH---HIPAAVDTNIYNTILSETCKRG-- 409
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLI-SH-----YASLGNKDEMM-KFWGLQKIKCKKQ 312
K D V+ + + +N L SH A L K +M+ +K +
Sbjct: 410 --------KLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGT 461
Query: 313 LNRD---YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKAD 369
L+ + Y ++ L K+G+ A + EE E D N +L GYS+ G +EK +
Sbjct: 462 LSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVE 521
Query: 370 AVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
+ ++ TP+ +++I+ GY+ K ++ K
Sbjct: 522 KLFIKMQSGSLTPSLATYNILLHGYSKKKDLLKC 555
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 56/307 (18%), Positives = 129/307 (42%), Gaps = 47/307 (15%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+Y +L + + G + + + ++M+ G + N ++ Y+ G+ EK+ + + M
Sbjct: 468 MYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKM 527
Query: 199 KENGVPPDNFSYRICINSYGARSEL---SSMENVLQEMESQSHISMDWGTYSTVANYYII 255
+ + P +Y I ++ Y + +L S N++ M IS D T ++
Sbjct: 528 QSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRM----GISPDKLTCHSIILGLCK 583
Query: 256 AGLKEKAIIYLKK--------------------CE-DIVSKSKDALGYNHLISHYASLGN 294
+G+ + LKK CE D + K+ D L +L+ +
Sbjct: 584 SGMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLLGIIPDVNT 643
Query: 295 KDEMMKFWGLQKIKCKKQ---------------LNRDYITMLGSLVKIGELEEAEKMLEE 339
+ + F GL + ++ + YI+++ + ++G+++ A ++ +E
Sbjct: 644 YNAI--FTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGAFRLKDE 701
Query: 340 WE-LSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKN 398
E + +D + ++ G +Q G +E+A VL +++K PT +++ + K
Sbjct: 702 MEAIGVSSWDV-AESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLMHMLCKKA 760
Query: 399 NMEKAFE 405
+ +A +
Sbjct: 761 KLSEALK 767
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 111/280 (39%), Gaps = 17/280 (6%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ ++N Y G ++ S+ +M ++G S Y ++ G + +L +
Sbjct: 328 FDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGLCKGGNLREAKKLLYKLH 387
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
D Y ++ R +LS + EM Q ++ D TY+ I+AGL
Sbjct: 388 HIPAAVDTNIYNTILSETCKRGKLSDAVALFGEM-VQFNVLPDSHTYAI-----ILAGLS 441
Query: 260 EK-----AIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN 314
K A+++ +K + S + + Y L +G + + + K +N
Sbjct: 442 RKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEME---HKGIN 498
Query: 315 RDYITM---LGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAV 371
D I + L ++G++E+ EK+ + + NI+L GYS+K + K
Sbjct: 499 PDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKKKDLLKCSKF 558
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
+ + G +P + I G ++ F+ +K+ +
Sbjct: 559 YNIMTRMGISPDKLTCHSIILGLCKSGMLDVGFKMLKKMI 598
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 49/281 (17%), Positives = 124/281 (44%), Gaps = 20/281 (7%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+N ++E + + + +M + + + YN ++ + + G E+ +L M+
Sbjct: 83 YNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILIDGHCDCGNFEQALRLLDVME 142
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G+ PD +Y ++ ++ +++++ + S + + + Y+ + + GL
Sbjct: 143 AKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIR-MSGMVVGYRAYTAMIDGLCKHGLL 201
Query: 260 EKAIIYLKKCEDIVSK---SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC---KKQL 313
++++ L D++ K S D + ++ LI+ + G K +++ C K L
Sbjct: 202 DESLQLL----DMMFKDGASPDIITFSVLINGFCKAG------KIKNAKEVICKMFKAGL 251
Query: 314 NRDYI---TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADA 370
+Y+ T++ + K G++ EA + + + D+ + N+++ + G + +A+
Sbjct: 252 APNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGRVAEAED 311
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
++ + P ++ I GY + KAF E +
Sbjct: 312 FMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMI 352
>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 144/326 (44%), Gaps = 7/326 (2%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYF-NSLNDEDKVDK-LYGALLN 145
AL + + M +G A +V + + +GK +E A + F N L D K D L L+N
Sbjct: 255 ALGLVQEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLIN 314
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM-CLYTNTGQHEKIPDVLLDMKENGVP 204
+ + G ++++L L +M+ + + + YN ++ L+ + + MK NGV
Sbjct: 315 IFGKAGRLEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVT 374
Query: 205 PDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAII 264
P +F+Y I I+ + + + +L+EM+ + Y ++ N A E A
Sbjct: 375 PSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCP-AAYCSLINALGKAKRYEAANE 433
Query: 265 YLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWG-LQKIKCKKQLNRDYITMLGS 323
+ ++ +S + Y +I + G E + + ++KI C + Y ++
Sbjct: 434 LFLELKENCGRSSARI-YAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDV-YAYNALMSG 491
Query: 324 LVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPT 383
LV+ G +EEA L E + D NIIL G ++ G E+A + ++ P
Sbjct: 492 LVRAGMIEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPD 551
Query: 384 PNSWSIIAAGYADKNNMEKAFECMKE 409
S++ I + E+A + M+E
Sbjct: 552 AVSYNTILGSLSRSGMFEEAAKLMRE 577
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 136/311 (43%), Gaps = 28/311 (9%)
Query: 152 LVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM-KENGVPPDNFSY 210
+V+++LS+ ++K +A YN ++ + G HEKI ++ +M E PD +Y
Sbjct: 146 MVNKALSVFYQIKSRKCKPTASTYNSMILMLMQEGHHEKIHELYHEMCNEGDCFPDTMTY 205
Query: 211 RICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCE 270
+ ++++ + EM++ + Y+T+ Y +G EKA+ +++ +
Sbjct: 206 SVLVSAFVKLGRDDYAIRLFDEMKANG-LHPTAKIYTTLLAIYFKSG-DEKALGLVQEMK 263
Query: 271 DIVSKSKDALGYNHLISHYASLGN-KDEMMKFWGLQKIKCKKQ--LNRDYITMLGSLVKI 327
D + Y LI G +D F + K CK L + I + G K
Sbjct: 264 D-KGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFG---KA 319
Query: 328 GELEEAEKMLEEWE-LSCYCYDFRVPNIILLGYSQKGMIE------KADAVLKEIVKKGK 380
G LE+A K+ ++ L C PN++ K + E +A + +++ G
Sbjct: 320 GRLEDALKLFDQMRSLKC------APNVVTYNTVIKALFESKAPASEAASWFEKMKANGV 373
Query: 381 TPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDV 440
TP+ ++SI+ G+ N +EKA ++E + K + P P+ S+++ LG +
Sbjct: 374 TPSSFTYSILIDGFCKTNRVEKALLLLEEM-----DEKGFPPCPAAYCSLINALGKAKRY 428
Query: 441 EEVEAFVSSLK 451
E LK
Sbjct: 429 EAANELFLELK 439
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 3/177 (1%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I L KR++ A ++ + S +AV + +GK A FN +
Sbjct: 418 LINALGKAKRYEAANELFLELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIG 477
Query: 135 KVDKLYG--ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+Y AL++ VR G+++E+ S ++ M+E G ++N I+ TG+ E+
Sbjct: 478 CNPDVYAYNALMSGLVRAGMIEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQAT 537
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTV 249
++ + MK++ + PD SY + S +++EM S+ D TYS++
Sbjct: 538 EMFMKMKDSLIKPDAVSYNTILGSLSRSGMFEEAAKLMREMGSRG-FEYDHITYSSI 593
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 95/209 (45%), Gaps = 2/209 (0%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L++ + + V+++L L+++M E G Y ++ ++E ++ L++K
Sbjct: 380 YSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFLELK 439
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
EN Y + I + G S ++ EM+ + + D Y+ + + + AG+
Sbjct: 440 ENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMK-KIGCNPDVYAYNALMSGLVRAGMI 498
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
E+A L+ E+ + D +N +++ A G ++ + + K K Y T
Sbjct: 499 EEAFSALRTMEE-NGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNT 557
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYD 348
+LGSL + G EEA K++ E + YD
Sbjct: 558 ILGSLSRSGMFEEAAKLMREMGSRGFEYD 586
>gi|255660910|gb|ACU25624.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 484
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 92/431 (21%), Positives = 180/431 (41%), Gaps = 30/431 (6%)
Query: 79 LRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAETYFNSLN------ 131
L S K +HALQ W+ L + H ++++G+ L A +
Sbjct: 19 LHSAKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEW 78
Query: 132 DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
DED ++ +++ Y ++G+V ES+ L QKM+E+G + +Y+ + + G++
Sbjct: 79 DED----MWVMMIDSYGKQGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRYMMA 134
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
M G+ P ++ + I + ++ + ++M+S+ IS D TY+T+ N
Sbjct: 135 KRYFNKMLSEGIEPTRXTFXVLIWGFFLSGKVETANRFFEDMKSR-EISPDVVTYNTMIN 193
Query: 252 YYIIAGLKEKAIIYL--KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
Y E+A Y K +I + Y LI Y S+ D+ ++ K
Sbjct: 194 GYYRVKKXEEAEKYFVEMKGRNI---EPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFG 250
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEE-WELSCYCYDFRVPNIILLGYSQKGMIEKA 368
K Y T+L L ++ EA +L+E + D + ++ + G ++ A
Sbjct: 251 IKPNAIXYSTLLPGLCNAEKMSEARSILKEMMDKYLAPTDNSIFMRLITSQCKSGNLDAA 310
Query: 369 DAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPK----- 423
VLK +++ + ++ + ++A + + + + E++ RP+
Sbjct: 311 SDVLKAMIRLSVPTEAGHYGVLIENFCKAGQYDQAVKLLDKLI---EKDIILRPQSTLHL 367
Query: 424 -PSLVSSILDWLGDNRDVEEVEAFVSS-LKIKVQKRNMYHALTEAHIRSGQEVDG--LLE 479
PS + ++++L +N + E V LK VQ + L H + G LL+
Sbjct: 368 EPSAYNPMIEYLCNNGQAAKAETLVRQLLKWGVQDPTALNTLIRGHSQEGSPDSAFELLK 427
Query: 480 SMKADDIDEDK 490
M +D +K
Sbjct: 428 IMLRRKVDSEK 438
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 137/330 (41%), Gaps = 54/330 (16%)
Query: 116 KVRGLESAETYFNSL---NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
+V+ E AE YF + N E V Y L+ YV VD++L L+++MK G +A
Sbjct: 197 RVKKXEEAEKYFVEMKGRNIEPTV-VTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNA 255
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP-DNFSYRICINSYGARSELSSMENVLQ 231
+ Y+ ++ N + + +L +M + + P DN + I S L + +VL+
Sbjct: 256 IXYSTLLPGLCNAEKMSEARSILKEMMDKYLAPTDNSIFMRLITSQCKSGNLDAASDVLK 315
Query: 232 EMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC--EDIVSKSKDAL-----GYNH 284
M S + + G Y + + AG ++A+ L K +DI+ + + L YN
Sbjct: 316 AMIRLS-VPTEAGHYGVLIENFCKAGQYDQAVKLLDKLIEKDIILRPQSTLHLEPSAYNP 374
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSC 344
+I + + G Q K + T++ L+K G
Sbjct: 375 MIEYLCNNG-----------QAAKAE--------TLVRQLLKWG---------------- 399
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
D N ++ G+SQ+G + A +LK ++++ +++ + Y KN A
Sbjct: 400 -VQDPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKKNEPADA- 457
Query: 405 ECMKEALAVHEENKFWRPKPSLVSSILDWL 434
K AL EN P +L S+++ L
Sbjct: 458 ---KAALDSMIENDHL-PDSALFRSVMESL 483
>gi|223948189|gb|ACN28178.1| unknown [Zea mays]
gi|413935735|gb|AFW70286.1| hypothetical protein ZEAMMB73_980179 [Zea mays]
Length = 597
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/317 (18%), Positives = 126/317 (39%), Gaps = 50/317 (15%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y AL+N + REGL +++ + ++M++ G YN +M Y+ G + ++ M+
Sbjct: 315 YTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLME 374
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G PD SY I ++++G E QE++ Q G T+ ++ ++
Sbjct: 375 HMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQ-------GMRPTMKSHMLLLSAH 427
Query: 260 EKAIIYLKKCEDIVSK------SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQL 313
++ + +CE+++++ D N +++ Y G D+M + + +
Sbjct: 428 ARS-GNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFA--------AM 478
Query: 314 NRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
R + G+ D N+++ Y + G +++ +A +
Sbjct: 479 ERGDGAIAGAP-----------------------DTSTYNVMVNAYGRAGYLDRMEAAFR 515
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDW 433
+ +G +W+ YA K + +E + + P +L
Sbjct: 516 SLAARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMV-----DAGCYPDAGTAKVLLAA 570
Query: 434 LGDNRDVEEVEAFVSSL 450
D R VE+V+A V S+
Sbjct: 571 CSDERQVEQVKAIVRSM 587
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 86/426 (20%), Positives = 174/426 (40%), Gaps = 53/426 (12%)
Query: 75 VIRQLRSRKRFKHALQVSEW-MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE 133
V QLR ++++ + V EW + + + + +D G+ R L AE + +L +
Sbjct: 142 VAVQLRLNRQWEPIITVCEWVLRRSSFRPDIICYNLLIDAYGQKRQLSEAEAAYMALLEA 201
Query: 134 DKV--DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
V + Y LL Y G + + ++ +M+ G +A YN + EK
Sbjct: 202 RCVPTEDTYALLLRAYCGSGQLHRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKA 261
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
+V MK+ + +Y + IN YG ++ S V +EM+S + TY+ + N
Sbjct: 262 VEVYQRMKKERCRTNTETYTLMINVYGKANQPMSSLRVFREMKSVG-CKPNICTYTALVN 320
Query: 252 YYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKK 311
+ GL EKA ++ + D YN L+ Y+ G + + L
Sbjct: 321 AFAREGLCEKAEEVFEEMQQ-AGHEPDVYAYNALMEAYSRAGLPQGASEIFSLM------ 373
Query: 312 QLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAV 371
E M E + + Y NI++ + + G+ ++A+A
Sbjct: 374 ----------------------EHMGCEPDRASY-------NILVDAFGRAGLHQEAEAA 404
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSIL 431
+E+ ++G PT S ++ + +A N+ + E M + +H+ RP ++++L
Sbjct: 405 FQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQ---LHKSG--LRPDTFALNAML 459
Query: 432 DWLGDNRDVEEVEAFVSSLK------IKVQKRNMYHALTEAHIRSG--QEVDGLLESMKA 483
+ G ++++E ++++ + Y+ + A+ R+G ++ S+ A
Sbjct: 460 NAYGRAGRLDDMERLFAAMERGDGAIAGAPDTSTYNVMVNAYGRAGYLDRMEAAFRSLAA 519
Query: 484 DDIDED 489
+ D
Sbjct: 520 RGLAAD 525
>gi|225440005|ref|XP_002276355.1| PREDICTED: pentatricopeptide repeat-containing protein At2g37230
[Vitis vinifera]
Length = 763
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 174/402 (43%), Gaps = 28/402 (6%)
Query: 87 HALQVSEWMSGQGLAFSVHD-HAVQLDLIGKVRGLESAETYFNSLN------DEDKVDKL 139
HALQ W+ GL D H ++++G+ L A + DED L
Sbjct: 134 HALQFFRWVERAGLFRHDRDTHLKIIEILGRASKLNHARCILLDMPKKGVEWDED----L 189
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ L++ Y + G+V ES+ + QKMKE+G + +Y+ + + G++ M
Sbjct: 190 FVLLIDSYGKAGIVQESVKVFQKMKELGVERTIKSYDALFKVILRRGRYMMAKRYFNAML 249
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN-YYIIAGL 258
GV P +Y I I + ++ + +EM+ + IS D TY+T+ N YY I +
Sbjct: 250 NEGVMPTCHTYNIMIWGFFLSLKVETANRFFEEMK-ERRISPDVVTYNTMINGYYRIKKM 308
Query: 259 KEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
+E +++ K +I + Y +I Y S+G D+ ++ + K K Y
Sbjct: 309 EEAEKFFVEMKGRNI---EPTVISYTTMIKGYVSVGRVDDGLRLFEEMKSFGIKPNAVTY 365
Query: 318 ITMLGSLVKIGELEEAEKMLEEW-ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
T+L L ++ EA+ +++E E D + ++ + G ++ A VLK ++
Sbjct: 366 STLLPGLCDGEKMLEAQNVVKEMVERYIAPKDNSIFMRLITCQCKAGQLDAAADVLKAMI 425
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSL------VSSI 430
+ + ++ + ++A + + + + E+ RP+ SL + I
Sbjct: 426 RLSIPTEAGHYGVLIENFCKSGVYDRAVKLLDKLI---EKEIILRPQNSLEMESSGYNLI 482
Query: 431 LDWLGDNRDVEEVEA-FVSSLKIKVQKRNMYHALTEAHIRSG 471
+++L ++ + E F +K VQ ++ L H + G
Sbjct: 483 IEYLCNSGQTSKAETLFRQLMKKGVQDPIAFNNLIRGHSKEG 524
>gi|297827231|ref|XP_002881498.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327337|gb|EFH57757.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 756
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/408 (21%), Positives = 171/408 (41%), Gaps = 24/408 (5%)
Query: 79 LRSRKRFKHALQVSEWMSGQGLAFSVHD-HAVQLDLIGKVRGLESAETYFNSLN------ 131
L K+ +HALQ W GL D H + ++G+V+ L A +
Sbjct: 123 LHGAKKLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVQKLNHARCILLDMPEKGVPW 182
Query: 132 DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
DED ++ L+ Y + G+V ES+ + QKMK++G + +YN + + G++
Sbjct: 183 DED----MFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNTLFKVILRRGRYMMA 238
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
M GV P +Y + + + L + +M+++ IS D TY+T+ N
Sbjct: 239 KRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFDDMKTRG-ISPDAVTYNTIIN 297
Query: 252 YYI-IAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCK 310
Y + E ++++ + + + Y +I Y S+ D+ ++ + +
Sbjct: 298 GYCRFKKMDEAEKLFVEMKGN--NSEPSVVTYTTMIKGYLSVDRVDDGLRIFEEMRSFGI 355
Query: 311 KQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYC-YDFRVPNIILLGYSQKGMIEKAD 369
+ Y T+L L +G++ EA+ +L+ D + +L+ S+ G + A
Sbjct: 356 EPNATTYSTLLPGLCDVGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAAT 415
Query: 370 AVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECM-----KEALAVHEENKFWRPKP 424
VLK + + ++ + +A + + KE + H++ +P
Sbjct: 416 EVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDT--LEMEP 473
Query: 425 SLVSSILDWLGDNRDVEEVEA-FVSSLKIKVQKRNMYHALTEAHIRSG 471
S + I+++L +N + E F +K VQ ++ + L H + G
Sbjct: 474 SAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALNNLIRGHAKEG 521
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 150/348 (43%), Gaps = 5/348 (1%)
Query: 57 LDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGK 116
+D+ EG + ++ L KHAL++ + M +G + + + + K
Sbjct: 304 IDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCK 363
Query: 117 VRGLESAETYFNS--LNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALN 174
+ +E A N L D Y L++ +E V+E+ L + + G
Sbjct: 364 LGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCT 423
Query: 175 YNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEME 234
+N ++ T H ++ +MK G PD F+Y + I+S +R L ++L+EME
Sbjct: 424 FNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEME 483
Query: 235 SQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGN 294
S S S + TY+T+ + + E+A + E + S++ + YN LI
Sbjct: 484 S-SGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEME-LQGISRNVVTYNTLIDGLCKNRR 541
Query: 295 KDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNI 354
+E + ++ K Y ++L + G++++A +++ + D
Sbjct: 542 VEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGT 601
Query: 355 ILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWS-IIAAGYADKNNME 401
++LG S+ G +E A +L+ + KG P +++ +I A + +K E
Sbjct: 602 LILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSE 649
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 78/391 (19%), Positives = 162/391 (41%), Gaps = 55/391 (14%)
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFG---SALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
L+ Y + L DE+++++ M+E FG A YN ++ + + + + + V M
Sbjct: 146 LIESYAKFELFDEAVAVVDIMEE--EFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMV 203
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G+ PD ++ I I + ++ +++EM S +S D T++T+ +I G
Sbjct: 204 SRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYG-LSPDEKTFTTLMQGFIEEGNM 262
Query: 260 EKAIIYLKKCEDIVSKSKDA--LGYNHLISHYASLGNKDEMMKFW--------------- 302
A L+ E +V+ + + N L+ Y G +E++ F
Sbjct: 263 NGA---LRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTF 319
Query: 303 -----GLQKIKCKKQ------------LNRD---YITMLGSLVKIGELEEAEKMLEEWEL 342
GL +I K + D Y +++ L K+GE+EEA ++L + L
Sbjct: 320 NSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMIL 379
Query: 343 SCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEK 402
+ + N ++ ++ +E+A + + + KG P +++ + G NN
Sbjct: 380 RDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRL 439
Query: 403 AFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNM--Y 460
A E +E + K P + ++D L +EE + + ++ RN+ Y
Sbjct: 440 AMELFEEM-----KTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTY 494
Query: 461 HALTEAHIRSG--QEVDGLLESMKADDIDED 489
+ L + ++ +E + + + M+ I +
Sbjct: 495 NTLIDGFCKNKRIEEAEEIFDEMELQGISRN 525
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 108/250 (43%), Gaps = 17/250 (6%)
Query: 193 DVLLDM-----KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYS 247
D +LD+ K+ P + Y + G SM VLQEM+ + + GT+
Sbjct: 86 DSILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMK-HTGCEIRRGTFL 144
Query: 248 TVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKI 307
+ Y L ++A+ + E+ DA YN L++ GNK ++++ + +
Sbjct: 145 ILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVD-GNKLKLVEIVNSRMV 203
Query: 308 KCKKQLNRDYIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGM 364
+ + D T ++ +L + ++ A M+EE D + ++ G+ ++G
Sbjct: 204 --SRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGN 261
Query: 365 IEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKP 424
+ A + +++V G + + +++ GY + +E+ + E N+ +RP
Sbjct: 262 MNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEM-----SNEGFRPDR 316
Query: 425 SLVSSILDWL 434
+S+++ L
Sbjct: 317 FTFNSLVNGL 326
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 98/432 (22%), Positives = 182/432 (42%), Gaps = 48/432 (11%)
Query: 68 SELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYF 127
S +E +++ + +F + + E M G++ +++ +++ ++ + L A
Sbjct: 74 SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAIL 133
Query: 128 NSLNDEDKVDKL-YG-------ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM 179
K+ KL YG +LLN + + E+++L+ +M EMG + +
Sbjct: 134 G------KMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFT--- 184
Query: 180 CLYTNTGQHEKIPDVLL---DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQ 236
L QH K + + M G PD +Y IN R E N+L +ME +
Sbjct: 185 TLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKME-K 243
Query: 237 SHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKD 296
I D Y+T+ + + A K E K D YN LIS + G
Sbjct: 244 GKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP-DVFTYNPLISCLCNYGRWS 302
Query: 297 EMMKFWGLQKIKCKKQLNRDYI---TMLGSLVKIGELEEAEKMLEEWELSCYCY-DFRVP 352
+ + L +K +N D + ++ + VK G+L EAEK+ +E S +C+ D
Sbjct: 303 DASR---LLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAY 359
Query: 353 NIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
N ++ G+ + +E+ V +E+ ++G +++ + G+ + + A K+ ++
Sbjct: 360 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 419
Query: 413 --VHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNM------YHALT 464
VH P + +LD L +N +VE + QKR+M Y +
Sbjct: 420 DGVH-------PDIMTYNILLDGLCNNGNVETALVVFEYM----QKRDMKLDIVTYTTMI 468
Query: 465 EAHIRSGQEVDG 476
EA ++G+ DG
Sbjct: 469 EALCKAGKVEDG 480
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 83/379 (21%), Positives = 156/379 (41%), Gaps = 58/379 (15%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
++DQ V G + + ++ L + A+ + E M +G + + ++ +
Sbjct: 167 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 226
Query: 116 KVRGLESAETYFNSLN--DEDKVDK---LYGALLNCYVREGLVDESLSLMQKMKEMGSFG 170
K RG + N LN ++ K++ +Y +++ + +D++ L KM+ G
Sbjct: 227 K-RG--EPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP 283
Query: 171 SALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVL 230
YN ++ N G+ +L DM E + PD + I+++ +L E +
Sbjct: 284 DVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLY 343
Query: 231 QEMESQSHISMDWGTYSTVANYYI----------------IAGLKEKAIIYL-------- 266
EM H D Y+T+ + GL + Y
Sbjct: 344 DEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQ 403
Query: 267 -KKCED-------IVSKS--KDALGYNHLISHYASLGN-KDEMMKFWGLQKIKCKKQLNR 315
+ C++ +VS D + YN L+ + GN + ++ F +QK K +
Sbjct: 404 ARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDI-V 462
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRV-PNII-----LLGYSQKGMIEKAD 369
Y TM+ +L K G++E+ W+L C V PN++ + G+ +KG+ E+AD
Sbjct: 463 TYTTMIEALCKAGKVEDG------WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 516
Query: 370 AVLKEIVKKGKTPTPNSWS 388
A+ E+ + G P PNS +
Sbjct: 517 ALFVEMKEDG--PLPNSGT 533
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 148/333 (44%), Gaps = 14/333 (4%)
Query: 86 KHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGAL 143
+ A +V S G+ ++ + + L L+ ++ ++ A + + V + Y +
Sbjct: 234 RTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVI 293
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
++ Y + + + L LM++++ G + YN I+ TG+ + VL MK +
Sbjct: 294 VDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRI 353
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAI 263
PDN Y I+ +G +S + EM+ + I D+ TY+++ + AG K +
Sbjct: 354 FPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKK-IVPDFVTYTSMIHGLCQAG---KVV 409
Query: 264 IYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT-- 319
K +++SK D + Y LI Y G EM + + L +K L + +T
Sbjct: 410 EARKLFSEMLSKGLKPDEVTYTALIDGYCKAG---EMKEAFSLHNQMVEKGLTPNVVTYT 466
Query: 320 -MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
++ L K GE++ A ++L E + N ++ G + G IE+A +++E+
Sbjct: 467 ALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLA 526
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
G P +++ I Y M KA E ++ L
Sbjct: 527 GFFPDTITYTTIMDAYCKMGEMAKAHELLRIML 559
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 119/282 (42%), Gaps = 10/282 (3%)
Query: 63 EGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLES 122
+G K E+ +I K A + M +GL +V + +D + K ++
Sbjct: 421 KGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDI 480
Query: 123 AETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMC 180
A + ++++ + Y AL+N + G +++++ LM++M G F + Y IM
Sbjct: 481 ANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMD 540
Query: 181 LYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHIS 240
Y G+ K ++L M + G+ P ++ + +N + L E +++ M + I
Sbjct: 541 AYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKG-IM 599
Query: 241 MDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMK 300
+ T++++ Y I +A I + K D YN LI + N E
Sbjct: 600 PNATTFNSLMKQYCIRN-NMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEA-- 656
Query: 301 FWGLQKIKCKKQLN---RDYITMLGSLVKIGELEEAEKMLEE 339
W L K +K + Y +++ K + EEA K+ EE
Sbjct: 657 -WFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEE 697
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Query: 330 LEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSI 389
+ A ++ E+ C++ NIIL Q G +++A ++L ++ +G P S+S+
Sbjct: 233 IRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSV 292
Query: 390 IAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSS 449
I GY + K + M+E + K +P +SI+ +L V E E +
Sbjct: 293 IVDGYCQVEQLGKVLKLMEEL-----QRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRV 347
Query: 450 LK 451
+K
Sbjct: 348 MK 349
>gi|326504498|dbj|BAJ91081.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 793
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 176/404 (43%), Gaps = 14/404 (3%)
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVR-GLESAETYFNSL-NDEDKVDK-LY 140
RF+ A+ V M G+ ++ + V L + K+ + +S+ ND +D+ Y
Sbjct: 193 RFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVVALVDSMKNDGIPLDRYTY 252
Query: 141 GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKE 200
L++C R L E+ + +M+ G + +N ++ +Y H++ VL +M+
Sbjct: 253 NTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYGKARMHDEAIGVLKEMEL 312
Query: 201 NGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKE 260
G PP +Y I+SY L + +EME + I D TY+T+ + AG +
Sbjct: 313 GGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKG-IQPDVITYTTLISGLDRAGKID 371
Query: 261 KAIIYLKKCEDIVSKSKDAL-GYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
AI E + + K L YN LI + G EMM + + + T
Sbjct: 372 AAIGTYD--EMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAGFVPDVVTWNT 429
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
+L + G E + +E + S Y + ++ YS+ G+ +++ + K +++ G
Sbjct: 430 LLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSMEIYKRMIEAG 489
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRD 439
P ++++ + + A E+A E L EN RP SS+L + +
Sbjct: 490 IYPDISTYNAVLSALARGGRWEQA-----EKLFAEMENLDCRPDELSYSSLLHAYANAKK 544
Query: 440 VEEVEAFVSSLKIKVQKRNMYHALTEAHIRSGQEVDGLLESMKA 483
+++++A S I +K +H L + + +V+ L E+ KA
Sbjct: 545 LDKMKAL--SEDIYAEKIESHHGLVKTLVLVNSKVNNLSETEKA 586
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/382 (20%), Positives = 157/382 (41%), Gaps = 37/382 (9%)
Query: 58 DQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKV 117
D+ + G K + +I+ R +F + V + + G V L + G+
Sbjct: 378 DEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAGFVPDVVTWNTLLAVFGQ- 436
Query: 118 RGLES-AETYFNSLNDEDKVDK--LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALN 174
GL+S F + V + Y +L++ Y R GL D+S+ + ++M E G +
Sbjct: 437 NGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSMEIYKRMIEAGIYPDIST 496
Query: 175 YNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEME 234
YN ++ G+ E+ + +M+ PD SY +++Y +L M+ + +++
Sbjct: 497 YNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSSLLHAYANAKKLDKMKALSEDIY 556
Query: 235 S---QSH---------ISMDWGTYSTVANYYIIAGLKEKAI----------IY-----LK 267
+ +SH ++ S ++ G + ++ +Y +K
Sbjct: 557 AEKIESHHGLVKTLVLVNSKVNNLSETEKAFLELGRRRCSLDINVLNAMVSVYGKNRMVK 616
Query: 268 KCEDIVSKSKDA------LGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITML 321
K E+I+S K + YN L+ Y+ LG+ ++ K + Y TM+
Sbjct: 617 KVEEILSLMKGSSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMI 676
Query: 322 GSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKT 381
+ + G+++EA ++ E + S D NI + Y M E+A +++ +V +G
Sbjct: 677 YAYGRKGQMKEASRLFSEMKSSGLIPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTRGCK 736
Query: 382 PTPNSWSIIAAGYADKNNMEKA 403
P +++ I Y + A
Sbjct: 737 PNERTYNSILQEYCRHGKIADA 758
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 131/294 (44%), Gaps = 10/294 (3%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD-M 198
Y AL++ + R +++++ ++M G + + YN ++ +Y+ K L+D M
Sbjct: 181 YTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVVALVDSM 240
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
K +G+P D ++Y I+ + V EM + + D T++++ + Y A +
Sbjct: 241 KNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRA-AGFEPDKVTFNSLLDVYGKARM 299
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
++AI LK+ E + + YN LIS Y G E + ++K + Y
Sbjct: 300 HDEAIGVLKEME-LGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVITYT 358
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
T++ L + G+++ A +E + + N ++ + +G + AV ++
Sbjct: 359 TLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSA 418
Query: 379 GKTPTPNSWSIIAAGYADK---NNMEKAFECMKEALAVHEENKFWRPKPSLVSS 429
G P +W+ + A + + + F+ MK++ V E + + SL+SS
Sbjct: 419 GFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYV----SLISS 468
>gi|297741611|emb|CBI32743.3| unnamed protein product [Vitis vinifera]
Length = 772
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 174/402 (43%), Gaps = 28/402 (6%)
Query: 87 HALQVSEWMSGQGLAFSVHD-HAVQLDLIGKVRGLESAETYFNSLN------DEDKVDKL 139
HALQ W+ GL D H ++++G+ L A + DED L
Sbjct: 134 HALQFFRWVERAGLFRHDRDTHLKIIEILGRASKLNHARCILLDMPKKGVEWDED----L 189
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ L++ Y + G+V ES+ + QKMKE+G + +Y+ + + G++ M
Sbjct: 190 FVLLIDSYGKAGIVQESVKVFQKMKELGVERTIKSYDALFKVILRRGRYMMAKRYFNAML 249
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN-YYIIAGL 258
GV P +Y I I + ++ + +EM+ + IS D TY+T+ N YY I +
Sbjct: 250 NEGVMPTCHTYNIMIWGFFLSLKVETANRFFEEMK-ERRISPDVVTYNTMINGYYRIKKM 308
Query: 259 KEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
+E +++ K +I + Y +I Y S+G D+ ++ + K K Y
Sbjct: 309 EEAEKFFVEMKGRNI---EPTVISYTTMIKGYVSVGRVDDGLRLFEEMKSFGIKPNAVTY 365
Query: 318 ITMLGSLVKIGELEEAEKMLEEW-ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
T+L L ++ EA+ +++E E D + ++ + G ++ A VLK ++
Sbjct: 366 STLLPGLCDGEKMLEAQNVVKEMVERYIAPKDNSIFMRLITCQCKAGQLDAAADVLKAMI 425
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSL------VSSI 430
+ + ++ + ++A + + + + E+ RP+ SL + I
Sbjct: 426 RLSIPTEAGHYGVLIENFCKSGVYDRAVKLLDKLI---EKEIILRPQNSLEMESSGYNLI 482
Query: 431 LDWLGDNRDVEEVEA-FVSSLKIKVQKRNMYHALTEAHIRSG 471
+++L ++ + E F +K VQ ++ L H + G
Sbjct: 483 IEYLCNSGQTSKAETLFRQLMKKGVQDPIAFNNLIRGHSKEG 524
>gi|449464322|ref|XP_004149878.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37230-like [Cucumis sativus]
Length = 760
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 92/424 (21%), Positives = 180/424 (42%), Gaps = 32/424 (7%)
Query: 67 ISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHD---HAVQLDLIGKVRGLESA 123
+ + + V L + K+ +HAL W+ GL F HD H ++++G+ L A
Sbjct: 116 VPQFDHNLVYNVLHAAKKSEHALNFFRWVERAGL-FQ-HDRETHFKIIEILGRASKLNHA 173
Query: 124 ETYFNSLN------DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNG 177
+ DED L+ L+ Y + G+V E++ + QKMKE+G S +Y+
Sbjct: 174 RCILLDMPNKGVQWDED----LFVVLIESYGKAGIVQEAVKIFQKMKELGVERSVKSYDA 229
Query: 178 IMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS 237
+ G++ M G+ P +Y + + + L + + ++M+S+
Sbjct: 230 LFKEIMRRGRYMMAKRYFNAMLNEGIEPIRHTYNVMLWGFFLSLRLETAKRFYEDMKSRG 289
Query: 238 HISMDWGTYSTVANYYIIAGLKEKAIIYLK--KCEDIVSKSKDALGYNHLISHYASLGNK 295
IS D TY+T+ N Y + E+A + K ++I + + Y +I Y S+
Sbjct: 290 -ISPDVVTYNTMINGYCRFKMMEEAEQFFTEMKGKNI---APTVISYTTMIKGYVSVSRA 345
Query: 296 DEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYC-YDFRVPNI 354
D+ ++ + K +K + Y T+L L +L EA K+L E + D +
Sbjct: 346 DDALRLFEEMKAAGEKPNDITYSTLLPGLCDAEKLPEARKILTEMVTRHFAPKDNSIFMR 405
Query: 355 ILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVH 414
+L + G ++ A VLK +++ + I+ ++A + ++ +
Sbjct: 406 LLSCQCKHGDLDAAMHVLKAMIRLSIPTEAGHYGILIENCCKAGMYDQAVKLLENLV--- 462
Query: 415 EENKFWRPKPSL------VSSILDWLGDNRDVEEVEAFVSS-LKIKVQKRNMYHALTEAH 467
E+ RP+ +L + I+ +L ++ + + F LK +Q ++ L H
Sbjct: 463 EKEIILRPQSTLEMEASAYNLIIQYLCNHGQTGKADTFFRQLLKKGIQDEVAFNNLIRGH 522
Query: 468 IRSG 471
+ G
Sbjct: 523 AKEG 526
>gi|302794911|ref|XP_002979219.1| hypothetical protein SELMODRAFT_110655 [Selaginella moellendorffii]
gi|300152987|gb|EFJ19627.1| hypothetical protein SELMODRAFT_110655 [Selaginella moellendorffii]
Length = 1143
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 75/156 (48%), Gaps = 2/156 (1%)
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE--DKVDKLYG 141
R K A+ ++ GL S+ + + + K AE F L +K+Y
Sbjct: 877 RLKKAIDTYSSLTNLGLRPSLQTYDTMISVFAKSGRTRDAEKMFKDLKSAGFQPDEKVYS 936
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
++NCY + G+ + + L + MK G ++YN ++ Y GQ K +L++M +
Sbjct: 937 QMMNCYAKSGMYEHAADLFEAMKLRGLRPHEVSYNNLIDAYARAGQFAKAEQLLVEMAKA 996
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQS 237
G PP + ++ + I++Y R + + EN L+ M++ +
Sbjct: 997 GCPPSSVTFLLLISAYAHRGKCNEAENALERMQTAA 1032
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 141/325 (43%), Gaps = 46/325 (14%)
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL-YGA 142
++ A+QV E + +GL L K +E A F +L + D + Y
Sbjct: 536 KYNEAVQVMEELLAKGLNLDDTAWKTLLHCYVKAGNVERATKTFKTLVESGIADLMAYND 595
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
+L+ Y +++++ L Q++K + + ++ LY N +VL M+E G
Sbjct: 596 MLSLYAEFDMLEDAKLLFQQLKSSSIQPDQVWFGTMVKLYCNANMVAAAEEVLRQMREKG 655
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQ----EMESQS--------------------- 237
PD+ + I IN+YG + + +L+ E ES++
Sbjct: 656 FTPDHITQGILINAYGEANRIEEAAGLLEASAKEDESEAAAISRIYLCLKFRLFDKATLL 715
Query: 238 ------HISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYAS 291
++D Y+ + ++ AG A + + +D +D+ HLI+ Y
Sbjct: 716 LHRVLESFTLDSAAYNQLTINFLKAGQVPPAEMLHSRMQDKGFDVEDST-LGHLIAAYGK 774
Query: 292 LGNKDEMMKFWGLQKIKCKKQLNRD---YITMLGSLVKIGELEEAEKMLEEW-ELSCYCY 347
G + + K K +L R+ Y +M+G+L+ +LE+A ++E+ ++ C
Sbjct: 775 AGRYEVLTKL--------KPELPRNNFVYSSMVGALINCNQLEKAAGLVEKMRQIGLKC- 825
Query: 348 DFRVPNIILLGYSQKGMIEKADAVL 372
D + +I+L YS+ G++E ADA++
Sbjct: 826 DSVLVSILLNAYSKAGLVEDADALI 850
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 86/405 (21%), Positives = 164/405 (40%), Gaps = 50/405 (12%)
Query: 39 LYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQ 98
+Y R +G + + +LDQ + E+ +I + + F L + E M +
Sbjct: 285 VYGRDKQIGLAEAAFQEMLDQKL----DPDEVAFSTMILNYANAEMFDEMLTMYEAMMSR 340
Query: 99 GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED-KVDKL-YGALLNCYVREGLVDES 156
G+ S + L + K L A + L +E ++ L Y ++ Y + G +E+
Sbjct: 341 GIVPSSVTYTTMLIHLNKAERLADAALLWEDLVEESVELSPLAYALMITIYRKLGRFEEA 400
Query: 157 LSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL-------------------- 196
L + + M G + +L YN ++ + G++++ DV
Sbjct: 401 LEVFEAMLGAGYYPDSLIYNMVLHMLGKLGRYDEAVDVFTAMQRQELCTSKYSYATMLHI 460
Query: 197 ---------------DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISM 241
DM+ P D Y I+ YG E + QEM ++ + +
Sbjct: 461 CEKADKFELAASIFSDMQMKRCPVDEVVYTSVISIYGKAGLYDEAEKLFQEM-NELRLLV 519
Query: 242 DWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK--SKDALGYNHLISHYASLGNKDEMM 299
D T+S +AN + AG +A+ + E++++K + D + L+ Y GN +
Sbjct: 520 DVKTFSVMANVRLKAGKYNEAVQVM---EELLAKGLNLDDTAWKTLLHCYVKAGNVERAT 576
Query: 300 K-FWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLG 358
K F L + + Y ML + LE+A+ + ++ + S D ++
Sbjct: 577 KTFKTLVESGIADLMA--YNDMLSLYAEFDMLEDAKLLFQQLKSSSIQPDQVWFGTMVKL 634
Query: 359 YSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
Y M+ A+ VL+++ +KG TP + I+ Y + N +E+A
Sbjct: 635 YCNANMVAAAEEVLRQMREKGFTPDHITQGILINAYGEANRIEEA 679
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 104/239 (43%), Gaps = 5/239 (2%)
Query: 175 YNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEME 234
Y+ ++ N Q EK ++ M++ G+ D+ I +N+Y +++ L + L M
Sbjct: 795 YSSMVGALINCNQLEKAAGLVEKMRQIGLKCDSVLVSILLNAY-SKAGLVEDADALIHMA 853
Query: 235 SQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGN 294
I +D Y+T+ + AG +KAI ++ + Y+ +IS +A G
Sbjct: 854 RGDGIPLDIVAYNTIIKADLRAGRLKKAIDTYSSLTNLGLRP-SLQTYDTMISVFAKSGR 912
Query: 295 KDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNI 354
+ K + K + + Y M+ K G E A + E +L N
Sbjct: 913 TRDAEKMFKDLKSAGFQPDEKVYSQMMNCYAKSGMYEHAADLFEAMKLRGLRPHEVSYNN 972
Query: 355 ILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADK---NNMEKAFECMKEA 410
++ Y++ G KA+ +L E+ K G P+ ++ ++ + YA + N E A E M+ A
Sbjct: 973 LIDAYARAGQFAKAEQLLVEMAKAGCPPSSVTFLLLISAYAHRGKCNEAENALERMQTA 1031
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 121/273 (44%), Gaps = 13/273 (4%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L +++ G V + L +M++ G ++ Y G++E VL +K
Sbjct: 730 YNQLTINFLKAGQVPPAEMLHSRMQDKGFDVEDSTLGHLIAAYGKAGRYE----VLTKLK 785
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+P +NF Y + + ++L ++++M Q + D S + N Y AGL
Sbjct: 786 PE-LPRNNFVYSSMVGALINCNQLEKAAGLVEKMR-QIGLKCDSVLVSILLNAYSKAGLV 843
Query: 260 EKA--IIYLKKCEDIVSKSKDALGYNHLISHYASLGN-KDEMMKFWGLQKIKCKKQLNRD 316
E A +I++ + + I D + YN +I G K + + L + + L +
Sbjct: 844 EDADALIHMARGDGI---PLDIVAYNTIIKADLRAGRLKKAIDTYSSLTNLGLRPSL-QT 899
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y TM+ K G +AEKM ++ + + + D +V + ++ Y++ GM E A + + +
Sbjct: 900 YDTMISVFAKSGRTRDAEKMFKDLKSAGFQPDEKVYSQMMNCYAKSGMYEHAADLFEAMK 959
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
+G P S++ + YA KA + + E
Sbjct: 960 LRGLRPHEVSYNNLIDAYARAGQFAKAEQLLVE 992
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 104/246 (42%), Gaps = 6/246 (2%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
L LLN Y + GLV+++ +L+ + G + YN I+ G+ +K D +
Sbjct: 829 LVSILLNAYSKAGLVEDADALIHMARGDGIPLDIVAYNTIIKADLRAGRLKKAIDTYSSL 888
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
G+ P +Y I+ + E + ++++S + D YS + N Y +G+
Sbjct: 889 TNLGLRPSLQTYDTMISVFAKSGRTRDAEKMFKDLKS-AGFQPDEKVYSQMMNCYAKSGM 947
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGN--KDEMMKFWGLQKIKCKKQLNRD 316
E A L + + + YN+LI YA G K E + + K C +
Sbjct: 948 YEHAAD-LFEAMKLRGLRPHEVSYNNLIDAYARAGQFAKAEQL-LVEMAKAGCPPS-SVT 1004
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
++ ++ + G+ EAE LE + + R N ++L +S+ + +A ++
Sbjct: 1005 FLLLISAYAHRGKCNEAENALERMQTAAIRPTVRHYNEVMLAFSRARLPSQAMESYLKME 1064
Query: 377 KKGKTP 382
+ G P
Sbjct: 1065 RSGIQP 1070
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 74/356 (20%), Positives = 149/356 (41%), Gaps = 27/356 (7%)
Query: 67 ISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAF--SVHDHAVQLDLIGKVRGLESAE 124
+ L + + L+ ++ +K A + WM Q L++ SV +++ L + G+ + + AE
Sbjct: 238 VGRLTFRELCTVLKWQQGWKEAQEFFAWMKLQ-LSYIPSVIVYSMLLKVYGRDKQIGLAE 296
Query: 125 TYFNSLNDE--DKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLY 182
F + D+ D + + ++ Y + DE L++ + M G S++ Y M ++
Sbjct: 297 AAFQEMLDQKLDPDEVAFSTMILNYANAEMFDEMLTMYEAMMSRGIVPSSVTYT-TMLIH 355
Query: 183 TNTGQHEKIPDVLL---DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHI 239
N + E++ D L D+ E V +Y + I Y +L E L+ E+
Sbjct: 356 LN--KAERLADAALLWEDLVEESVELSPLAYALMITIY---RKLGRFEEALEVFEAM--- 407
Query: 240 SMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDAL-----GYNHLISHYASLGN 294
+ G Y Y ++ + K Y + + + + L Y ++ H +
Sbjct: 408 -LGAGYYPDSLIYNMVLHMLGKLGRYDEAVDVFTAMQRQELCTSKYSYATML-HICEKAD 465
Query: 295 KDEMMK--FWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVP 352
K E+ F +Q +C Y +++ K G +EAEK+ +E D +
Sbjct: 466 KFELAASIFSDMQMKRCPVD-EVVYTSVISIYGKAGLYDEAEKLFQEMNELRLLVDVKTF 524
Query: 353 NIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMK 408
+++ + G +A V++E++ KG +W + Y N+E+A + K
Sbjct: 525 SVMANVRLKAGKYNEAVQVMEELLAKGLNLDDTAWKTLLHCYVKAGNVERATKTFK 580
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 158/356 (44%), Gaps = 29/356 (8%)
Query: 140 YGALLNCYVREGLVDESLSLMQKM-KEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
Y ++N + ++G +D + ++++M G + Y ++ G+ ++ +++ +M
Sbjct: 80 YSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREM 139
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
K GV PD F++ I + ++ + +E+ + S D TY+ + + + +G
Sbjct: 140 KLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGN 199
Query: 259 KEKAIIYL-----KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQL 313
EKA+ L +KC + + Y+ L+ G+ D+ + + K
Sbjct: 200 LEKAMKMLGVMEGRKC------VPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPN 253
Query: 314 NRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
Y T++ L +++ A +++E +C D N +L GY + G IE+A + K
Sbjct: 254 VVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFK 313
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKA---FECMKEALAVHEENKFWRPKPSLVSSI 430
E+ K P +++ + G+ + + +E+A E MK A + P +V+
Sbjct: 314 EMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGID---------PDVVTYS 364
Query: 431 LDWLGDNRDVEEVEA--FVSSLKIKVQKRN--MYHALTEAHIRSGQEVDGLLESMK 482
+ G +R VEA F+ + + N Y +L + ++G+ VD +E +K
Sbjct: 365 IVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGR-VDHAMEVLK 419
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 125/295 (42%), Gaps = 21/295 (7%)
Query: 85 FKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGA 142
+ A+++ M G+ +V ++ L + K L+ A F + + V + Y
Sbjct: 200 LEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTT 259
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
L++ VD + LM +M ++YN ++ Y G+ E+ + +M
Sbjct: 260 LIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKS 319
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
PD +Y + + S L +L+ M++ + I D TYS V Y A +A
Sbjct: 320 CLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEA 379
Query: 263 IIYLKKCEDIVSK--SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR----- 315
++ ++++++ + +A+ Y+ LI G D M+ K +N+
Sbjct: 380 AEFI---QEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVL-------KNMVNKRVEPS 429
Query: 316 --DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKA 368
+ +++G+L ++G+++EA K+L +L G+S+ G +E A
Sbjct: 430 VGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIA 484
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 129/336 (38%), Gaps = 62/336 (18%)
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
V P+ +Y + +N S VL+EM ++ D TYSTV N + G ++A
Sbjct: 37 VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRA 96
Query: 263 IIYLKK---------------------CED--------IVSKSK------DALGYNHLIS 287
L++ C D +V + K D ++ LI+
Sbjct: 97 CEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALIT 156
Query: 288 HYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT---MLGSLVKIGELEEAEKMLEEWE-LS 343
+ + DE +K + ++I D +T ++ K G LE+A KML E
Sbjct: 157 GWCNARKVDEALKLY--KEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRK 214
Query: 344 CYCYDFRVPNII-----LLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKN 398
C VPN++ L G + G +++A + + + KG P +++ + G +
Sbjct: 215 C------VPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAH 268
Query: 399 NMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK--VQK 456
++ A M E A P +++LD +EE + + K +
Sbjct: 269 KVDAARLLMDEMTAT-----CCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPD 323
Query: 457 RNMYHALTEAHIRSG--QEVDGLLESMK-ADDIDED 489
R Y L + +E LLE+MK A ID D
Sbjct: 324 RITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPD 359
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/385 (19%), Positives = 157/385 (40%), Gaps = 50/385 (12%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
V + V +G ++ +IR + A+++ M +G + + ++ +G
Sbjct: 87 VYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALG 146
Query: 116 KVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
K ++ A ++F+++ + + Y L++ + + G +D +L L +MK G S +
Sbjct: 147 KAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVV 206
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
YN ++ + G+ + M +G PD+++Y +N G + V +EM
Sbjct: 207 TYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREM 266
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLG 293
+D G + D + YN L++ A G
Sbjct: 267 -------VDRGV------------------------------AVDLVNYNSLLATLAKAG 289
Query: 294 NKDEMMKFWGLQKIKCKKQLNRD---YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFR 350
N D + W L K +K + D + T++ +L K + + A ++ S D
Sbjct: 290 NMD---RVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLI 346
Query: 351 VPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEA 410
NI++ Y++ G +A +L+E+V+ G P +++ + A +++AF ++E
Sbjct: 347 SYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEM 406
Query: 411 LAVHEENKFWRPKPSLVSSILDWLG 435
E RP + ++D LG
Sbjct: 407 -----ETAGCRPDVVTYNRLMDMLG 426
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 107/257 (41%), Gaps = 4/257 (1%)
Query: 79 LRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDK 138
L S R A ++ M+G G + + ++ ++ +GK +E A F + D
Sbjct: 215 LCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVD 274
Query: 139 L--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
L Y +LL + G +D LM++M G A ++N IM + + +V
Sbjct: 275 LVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFA 334
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
M E+G PD SY I I+SY + + +L+EM I + TY+++ ++
Sbjct: 335 RMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIP-ETKTYNSLIHWLATD 393
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
G ++A L++ E + D + YN L+ G + + K K +
Sbjct: 394 GQVDEAFAVLEEMETAGCRP-DVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLS 452
Query: 317 YITMLGSLVKIGELEEA 333
Y + L L+EA
Sbjct: 453 YAVRIDGLAFDDRLDEA 469
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 87/424 (20%), Positives = 165/424 (38%), Gaps = 48/424 (11%)
Query: 72 LQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLN 131
++I L + F+ A V + + +G + V + G+ L+SA F +
Sbjct: 68 FTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMK 127
Query: 132 --DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHE 189
+ + YG L+N + G V E+ S M E G + YN +M + GQ +
Sbjct: 128 IKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLD 187
Query: 190 KIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTV 249
+ +MK G P +Y I +++ + + + + +M S D TYST+
Sbjct: 188 MALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDG-CSPDSYTYSTL 246
Query: 250 ANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
N +G E+A ++ D + D + YN L
Sbjct: 247 VNGLGKSGRVEEAHKVFREMVD-RGVAVDLVNYNSL------------------------ 281
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKAD 369
L +L K G ++ K+++E + D N I+ + + A
Sbjct: 282 -----------LATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAR 330
Query: 370 AVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSS 429
V +V+ G P S++I+ YA + +A + ++E + E F P+ +S
Sbjct: 331 EVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMV----EAGFI-PETKTYNS 385
Query: 430 ILDWLGDNRDVEEVEAFVSSLKIKVQKRNM--YHALTEAHIRSG--QEVDGLLESMKADD 485
++ WL + V+E A + ++ + ++ Y+ L + + G Q L + MK
Sbjct: 386 LIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKG 445
Query: 486 IDED 489
++ D
Sbjct: 446 VEPD 449
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 122/293 (41%), Gaps = 7/293 (2%)
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
L+ Y R ++ L + + + + ++ + N+G+ E+ V + + G
Sbjct: 36 LITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKG 95
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
D F+Y + I +G +L S + +EM+ + D TY + N AG ++A
Sbjct: 96 CQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGS-EPDEYTYGFLVNALGKAGRVQEA 154
Query: 263 IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLG 322
+ + + + YN L+ + +G D + + K + + Y +L
Sbjct: 155 RSFFDAMLE-RGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLD 213
Query: 323 SLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTP 382
+L G + A K+ + D + ++ G + G +E+A V +E+V +G
Sbjct: 214 ALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAV 273
Query: 383 TPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLG 435
+++ + A A NM++ ++ MKE K + P ++I+D LG
Sbjct: 274 DLVNYNSLLATLAKAGNMDRVWKLMKEM-----SRKGFHPDAFSFNTIMDALG 321
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 51/98 (52%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
K Y +L++ +G VDE+ +++++M+ G + YN +M + G++++ +
Sbjct: 381 KTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQ 440
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMES 235
MK+ GV PD SY + I+ L + ++M++
Sbjct: 441 MKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKA 478
>gi|449507993|ref|XP_004163187.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g37230-like [Cucumis sativus]
Length = 760
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 92/424 (21%), Positives = 180/424 (42%), Gaps = 32/424 (7%)
Query: 67 ISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHD---HAVQLDLIGKVRGLESA 123
+ + + V L + K+ +HAL W+ GL F HD H ++++G+ L A
Sbjct: 116 VPQFDHNLVYNVLHAAKKSEHALNFFRWVERAGL-FQ-HDRETHFKIIEILGRASKLNHA 173
Query: 124 ETYFNSLN------DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNG 177
+ DED L+ L+ Y + G+V E++ + QKMKE+G S +Y+
Sbjct: 174 RCILLDMPNKGVQWDED----LFVVLIESYGKAGIVQEAVKIFQKMKELGVERSVKSYDA 229
Query: 178 IMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS 237
+ G++ M G+ P +Y + + + L + + ++M+S+
Sbjct: 230 LFKEIMRRGRYMMAKRYFNAMLNEGIEPIRHTYNVMLWGFFLSLRLETAKRFYEDMKSRG 289
Query: 238 HISMDWGTYSTVANYYIIAGLKEKAIIYLK--KCEDIVSKSKDALGYNHLISHYASLGNK 295
IS D TY+T+ N Y + E+A + K ++I + + Y +I Y S+
Sbjct: 290 -ISPDVVTYNTMINGYCRFKMMEEAEQFFTEMKGKNI---APTVISYTTMIKGYVSVSRA 345
Query: 296 DEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYC-YDFRVPNI 354
D+ ++ + K +K + Y T+L L +L EA K+L E + D +
Sbjct: 346 DDALRLFEEMKAAGEKPNDITYSTLLPGLCDAEKLPEARKILTEMVTRHFAPKDNSIFMR 405
Query: 355 ILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVH 414
+L + G ++ A VLK +++ + I+ ++A + ++ +
Sbjct: 406 LLSCQCKHGDLDAAMHVLKAMIRLSIPTEAGHYGILIENCCKAGMYDQAVKLLENLV--- 462
Query: 415 EENKFWRPKPSL------VSSILDWLGDNRDVEEVEAFVSS-LKIKVQKRNMYHALTEAH 467
E+ RP+ +L + I+ +L ++ + + F LK +Q ++ L H
Sbjct: 463 EKEIILRPQSTLEMEASAYNLIIQYLCNHGQTGKADTFFRQLLKKGIQDEVAFNNLIRGH 522
Query: 468 IRSG 471
+ G
Sbjct: 523 AKEG 526
>gi|302817236|ref|XP_002990294.1| hypothetical protein SELMODRAFT_131439 [Selaginella moellendorffii]
gi|300141856|gb|EFJ08563.1| hypothetical protein SELMODRAFT_131439 [Selaginella moellendorffii]
Length = 1139
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 75/156 (48%), Gaps = 2/156 (1%)
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE--DKVDKLYG 141
R K A+ ++ GL S+ + + + K AE F L +K+Y
Sbjct: 876 RLKKAIDTYSSLTNLGLRPSLQTYDTMISVFAKSGRTRDAEKMFKDLKSAGFQPDEKVYS 935
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
++NCY + G+ + + L + MK G ++YN ++ Y GQ K +L++M +
Sbjct: 936 QMMNCYAKSGMYEHAADLFEAMKLRGLRPHEVSYNNLIDAYARAGQFAKAEQLLVEMAKA 995
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQS 237
G PP + ++ + I++Y R + + EN L+ M++ +
Sbjct: 996 GCPPSSVTFLLLISAYAHRGKCNEAENALERMQTAA 1031
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 85/405 (20%), Positives = 165/405 (40%), Gaps = 50/405 (12%)
Query: 39 LYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQ 98
+Y R +G + + +LDQ + E+ +I + + F L + E M +
Sbjct: 281 VYGRDKQIGLAEAAFQEMLDQKL----DPDEVAFSTMILNYANAEMFDEMLTMYEAMMSR 336
Query: 99 GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED-KVDKL-YGALLNCYVREGLVDES 156
G+ S + L + K L A + L +E ++ L Y ++ Y + G +E+
Sbjct: 337 GIVPSSVTYTTMLIHLNKAERLADAALLWEDLVEESVELSPLAYALMITIYRKLGRFEEA 396
Query: 157 LSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL-------------------- 196
L + + M G + +L YN ++ + G++++ DV
Sbjct: 397 LEVFEAMLGAGYYPDSLIYNMVLHMLGKLGRYDEAVDVFTAMQRQELCTSKYSYATMLHI 456
Query: 197 ---------------DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISM 241
DM+ P D Y I+ YG E + QEM ++ + +
Sbjct: 457 CEKADKFELAASIFSDMQMKRCPVDEVVYTSVISIYGKAGLYDEAEKLFQEM-NELRLLV 515
Query: 242 DWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK--SKDALGYNHLISHYASLGNKDEMM 299
D T+S +AN + AG +A+ + E++++K + D + + L+ Y GN +
Sbjct: 516 DVKTFSVMANVRLKAGKYNEAVQVM---EELLAKGLNLDDMAWKTLLHCYVKAGNVERAT 572
Query: 300 K-FWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLG 358
K F L + + Y +L + LE+A+ + ++ + S D ++
Sbjct: 573 KTFKTLVESGIADLMA--YNDVLSLYAEFDMLEDAKLLFQQLKSSSIQPDQVWFGTMVKL 630
Query: 359 YSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
Y M+ A+ VL+++ +KG TP + I+ Y + N +E+A
Sbjct: 631 YCNANMVAAAEEVLRQMREKGFTPDHITQGILINAYGEANRIEEA 675
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 133/316 (42%), Gaps = 46/316 (14%)
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL-YGA 142
++ A+QV E + +GL L K +E A F +L + D + Y
Sbjct: 532 KYNEAVQVMEELLAKGLNLDDMAWKTLLHCYVKAGNVERATKTFKTLVESGIADLMAYND 591
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
+L+ Y +++++ L Q++K + + ++ LY N +VL M+E G
Sbjct: 592 VLSLYAEFDMLEDAKLLFQQLKSSSIQPDQVWFGTMVKLYCNANMVAAAEEVLRQMREKG 651
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQ----EMESQS--------------------- 237
PD+ + I IN+YG + + +L+ E ES++
Sbjct: 652 FTPDHITQGILINAYGEANRIEEAAGLLEASAKEDESEAAAISRIYLCLKFRLFDKATLL 711
Query: 238 ------HISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYAS 291
++D Y+ + ++ AG A + + +D +D+ HLI+ Y
Sbjct: 712 LHRVLESFTLDSAAYNQLTINFLKAGQVLPAEMLHSRMQDKGFDVEDST-LGHLIAAYGK 770
Query: 292 LGNKDEMMKFWGLQKIKCKKQLNRD---YITMLGSLVKIGELEEAEKMLEEW-ELSCYCY 347
G + + + K +L R+ Y +M+G+L+ +LEEA ++E+ ++ C
Sbjct: 771 AGRYEVLTRL--------KPELPRNNFVYSSMVGALINCNQLEEAAGLVEKMRQIGLKC- 821
Query: 348 DFRVPNIILLGYSQKG 363
D + +I+L YS+ G
Sbjct: 822 DSVLVSILLNAYSKAG 837
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 74/356 (20%), Positives = 149/356 (41%), Gaps = 27/356 (7%)
Query: 67 ISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAF--SVHDHAVQLDLIGKVRGLESAE 124
+ L + + L+ ++ +K A + WM Q L++ SV +++ L + G+ + + AE
Sbjct: 234 VGRLTFRELCTVLKWQQGWKEAQEFFAWMKLQ-LSYIPSVIVYSMLLKVYGRDKQIGLAE 292
Query: 125 TYFNSLNDE--DKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLY 182
F + D+ D + + ++ Y + DE L++ + M G S++ Y M ++
Sbjct: 293 AAFQEMLDQKLDPDEVAFSTMILNYANAEMFDEMLTMYEAMMSRGIVPSSVTYT-TMLIH 351
Query: 183 TNTGQHEKIPDVLL---DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHI 239
N + E++ D L D+ E V +Y + I Y +L E L+ E+
Sbjct: 352 LN--KAERLADAALLWEDLVEESVELSPLAYALMITIY---RKLGRFEEALEVFEAM--- 403
Query: 240 SMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDAL-----GYNHLISHYASLGN 294
+ G Y Y ++ + K Y + + + + L Y ++ H +
Sbjct: 404 -LGAGYYPDSLIYNMVLHMLGKLGRYDEAVDVFTAMQRQELCTSKYSYATML-HICEKAD 461
Query: 295 KDEMMK--FWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVP 352
K E+ F +Q +C Y +++ K G +EAEK+ +E D +
Sbjct: 462 KFELAASIFSDMQMKRCPVD-EVVYTSVISIYGKAGLYDEAEKLFQEMNELRLLVDVKTF 520
Query: 353 NIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMK 408
+++ + G +A V++E++ KG +W + Y N+E+A + K
Sbjct: 521 SVMANVRLKAGKYNEAVQVMEELLAKGLNLDDMAWKTLLHCYVKAGNVERATKTFK 576
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 114/275 (41%), Gaps = 14/275 (5%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L +++ G V + L +M++ G ++ Y G++E VL +K
Sbjct: 726 YNQLTINFLKAGQVLPAEMLHSRMQDKGFDVEDSTLGHLIAAYGKAGRYE----VLTRLK 781
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+P +NF Y + + ++L ++++M Q + D S + N Y AG
Sbjct: 782 PE-LPRNNFVYSSMVGALINCNQLEEAAGLVEKMR-QIGLKCDSVLVSILLNAYSKAG-- 837
Query: 260 EKAIIYLK----KCEDIVSKSKDALGYNHLISHYASLGN-KDEMMKFWGLQKIKCKKQLN 314
E+ I + + YN +I G K + + L + + L
Sbjct: 838 EQKIFSFSGRWYPAGYCCLQHDHIVAYNTIIKADLRPGRLKKAIDTYSSLTNLGLRPSL- 896
Query: 315 RDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
+ Y TM+ K G +AEKM ++ + + + D +V + ++ Y++ GM E A + +
Sbjct: 897 QTYDTMISVFAKSGRTRDAEKMFKDLKSAGFQPDEKVYSQMMNCYAKSGMYEHAADLFEA 956
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
+ +G P S++ + YA KA + + E
Sbjct: 957 MKLRGLRPHEVSYNNLIDAYARAGQFAKAEQLLVE 991
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 104/255 (40%), Gaps = 34/255 (13%)
Query: 175 YNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEME 234
Y+ ++ N Q E+ ++ M++ G+ D+ I +N+Y E Q++
Sbjct: 791 YSSMVGALINCNQLEEAAGLVEKMRQIGLKCDSVLVSILLNAYSKAGE--------QKIF 842
Query: 235 SQSHISMDW--GTYSTVANYYIIAGLKEKAII-------YLKKCEDIVSKSKDALG---- 281
S S W Y + + +I+A II LKK D S S LG
Sbjct: 843 S---FSGRWYPAGYCCLQHDHIVA---YNTIIKADLRPGRLKKAIDTYS-SLTNLGLRPS 895
Query: 282 ---YNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLE 338
Y+ +IS +A G + K + K + + Y M+ K G E A + E
Sbjct: 896 LQTYDTMISVFAKSGRTRDAEKMFKDLKSAGFQPDEKVYSQMMNCYAKSGMYEHAADLFE 955
Query: 339 EWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADK- 397
+L N ++ Y++ G KA+ +L E+ K G P+ ++ ++ + YA +
Sbjct: 956 AMKLRGLRPHEVSYNNLIDAYARAGQFAKAEQLLVEMAKAGCPPSSVTFLLLISAYAHRG 1015
Query: 398 --NNMEKAFECMKEA 410
N E A E M+ A
Sbjct: 1016 KCNEAENALERMQTA 1030
>gi|255660932|gb|ACU25635.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 484
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 91/431 (21%), Positives = 183/431 (42%), Gaps = 30/431 (6%)
Query: 79 LRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAETYFNSLN------ 131
L K +HALQ W+ L + H ++++G+ L A +
Sbjct: 19 LHGAKNSEHALQFFRWVERSNLFQHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEW 78
Query: 132 DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
DED ++ +++ Y G+V ES+ L QKM E+G + +Y+ + + + G++
Sbjct: 79 DED----MWVLMIDSYGNGGIVQESVKLFQKMDELGVERTIKSYDALFKVISRRGRYMMA 134
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
M G+ P ++ I I + ++ + ++M+++ I+ D TY+T+ N
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNIMIWGFFLSGKVETANRFFEDMKNR-EITPDVITYNTMIN 193
Query: 252 -YYIIAGLKEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
YY + ++E +++ K +I + Y LI Y S+ D+ ++ K
Sbjct: 194 GYYRVKKMEEAEKYFVEMKGRNI---EPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGYG 250
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEW-ELSCYCYDFRVPNIILLGYSQKGMIEKA 368
K Y T+L L ++ EA +L+E + D + ++ G + G ++ A
Sbjct: 251 IKANAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISGQCKAGNLDAA 310
Query: 369 DAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSL-- 426
VLK +++ + ++ Y ++A + + + + E++ RP+ +L
Sbjct: 311 ADVLKAMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLI---EKDIILRPQSTLHM 367
Query: 427 ----VSSILDWLGDNRDVEEVEAFVSSL-KIKVQKRNMYHALTEAHIRSGQEVDG--LLE 479
+ ++ +L +N + EA V L K+ VQ + L H + G LL+
Sbjct: 368 ESSAYNPLIGYLCNNGQTAKAEALVRQLMKLGVQDPTALNTLIRGHSQEGSPDSAFELLK 427
Query: 480 SMKADDIDEDK 490
M +D +K
Sbjct: 428 IMLRRKVDSEK 438
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 83/392 (21%), Positives = 164/392 (41%), Gaps = 34/392 (8%)
Query: 65 QKISELELQRVIRQ-------LRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQL---DLI 114
QK+ EL ++R I+ + R R+ A + M +G+ + H + + L
Sbjct: 104 QKMDELGVERTIKSYDALFKVISRRGRYMMAKRYFNKMLSEGIEPTRHTFNIMIWGFFLS 163
Query: 115 GKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
GKV E+A +F + + + + Y ++N Y R ++E+ +MK +
Sbjct: 164 GKV---ETANRFFEDMKNREITPDVITYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTV 220
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQE 232
+ Y ++ Y + Q + ++ +MK G+ + +Y + ++S ++L+E
Sbjct: 221 VTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKANAITYSTLLPGLCNAEKMSEARSILKE 280
Query: 233 MESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASL 292
M + D + + + AG + A LK + S +A Y LI +Y
Sbjct: 281 MVDKYIAPTDNSIFMRLISGQCKAGNLDAAADVLKAMIRL-SVPTEAGHYGVLIENYCKA 339
Query: 293 GNKDEMMKFWGLQKIKCKKQLNRD----------YITMLGSLVKIGELEEAEKMLEEWEL 342
G D+ +K L K+ K + R Y ++G L G+ +AE ++ + +
Sbjct: 340 GQYDQAVKL--LDKLIEKDIILRPQSTLHMESSAYNPLIGYLCNNGQTAKAEALVRQL-M 396
Query: 343 SCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEK 402
D N ++ G+SQ+G + A +LK ++++ +++ + Y ++
Sbjct: 397 KLGVQDPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKRSEPAD 456
Query: 403 AFECMKEALAVHEENKFWRPKPSLVSSILDWL 434
A K AL EN P SL S+++ L
Sbjct: 457 A----KAALDSMIENDHL-PDSSLFRSVMESL 483
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 151/353 (42%), Gaps = 36/353 (10%)
Query: 56 VLDQWVLEGQKISELELQR------------VIRQLRSRKRFKHALQVSEWMSGQG-LAF 102
+L G+ + LEL R VI +R R + AL+V M +G +A
Sbjct: 122 MLRHLCATGKPVRALELLRQMPRPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAP 181
Query: 103 SVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDK---LYGALLNCYVREGLVDESLSL 159
+ +A + K+ +E A F+ + + +V +Y AL+ Y G +D +L
Sbjct: 182 DKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQY 241
Query: 160 MQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGA 219
+ M + G + YN ++ G+ VL +M+ NG+ PD F+Y I IN Y
Sbjct: 242 REDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCK 301
Query: 220 RSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS--K 277
V +EM S+ + TY+++ + G ++ K V K
Sbjct: 302 EGNEKKALEVFEEM-SRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVA---VKKGIRP 357
Query: 278 DALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD---YITMLGSLVKIGELEEAE 334
D + YN LI+ + + G+ + + + KK++ D Y T++ +G L+EA
Sbjct: 358 DVVMYNALINSHCAGGDMERAFEIMAEME---KKRIPPDDVTYNTLIRGFCLLGRLDEAR 414
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSW 387
+++E D LG + G + A+ ++KE+V KG TP +++
Sbjct: 415 GLIDEMTKRGIQPD--------LGLCKNGQGDDAENLMKEMVGKGITPDDSTY 459
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 117/260 (45%), Gaps = 16/260 (6%)
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKE-NGVPPDNFSYRICI 214
+L L+++M +A+ YN ++ + G+ + +V+ +M+E G+ PD ++Y I
Sbjct: 135 ALELLRQMPR----PNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLI 190
Query: 215 NSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVS 274
+ + + V EM +Q ++ Y+ + Y G + A+ Y ED+V
Sbjct: 191 SGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYR---EDMVQ 247
Query: 275 K--SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT---MLGSLVKIGE 329
+ + YN L+ G + + L++++ + L+ D T ++ K G
Sbjct: 248 RGVAMTVATYNLLVHALFMDGRASD--AYAVLEEMQ-RNGLSPDVFTYNILINGYCKEGN 304
Query: 330 LEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSI 389
++A ++ EE ++ +S+KG +++ D + K VKKG P ++
Sbjct: 305 EKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNA 364
Query: 390 IAAGYADKNNMEKAFECMKE 409
+ + +ME+AFE M E
Sbjct: 365 LINSHCAGGDMERAFEIMAE 384
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 123/289 (42%), Gaps = 9/289 (3%)
Query: 205 PDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAII 264
P+ +Y I + AR + + V++EM + I+ D TY+T+ + + G E A
Sbjct: 145 PNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAAK 204
Query: 265 YLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSL 324
+ + A+ YN LI Y G D +++ + Y ++ +L
Sbjct: 205 VFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHAL 264
Query: 325 VKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTP 384
G +A +LEE + + D NI++ GY ++G +KA V +E+ +KG T
Sbjct: 265 FMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATA 324
Query: 385 NSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVE 444
+++ + ++ K +++ K A+ K RP + +++++ D+E
Sbjct: 325 VTYTSLIYAFSRKGQVQETDRLFKVAV-----KKGIRPDVVMYNALINSHCAGGDMERAF 379
Query: 445 AFVSSLKIKVQKRN--MYHALTEAHIRSGQ--EVDGLLESMKADDIDED 489
++ ++ K + Y+ L G+ E GL++ M I D
Sbjct: 380 EIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPD 428
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 91/225 (40%), Gaps = 4/225 (1%)
Query: 22 EIFTRAYRAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRS 81
E+ T+ A V N L G DV+L + V G ++ ++ L
Sbjct: 208 EMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQ-YREDMVQRGVAMTVATYNLLVHALFM 266
Query: 82 RKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED--KVDKL 139
R A V E M GL+ V + + ++ K + A F ++ +
Sbjct: 267 DGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVT 326
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +L+ + R+G V E+ L + + G + YN ++ + G E+ +++ +M+
Sbjct: 327 YTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEME 386
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWG 244
+ +PPD+ +Y I + L ++ EM ++ I D G
Sbjct: 387 KKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEM-TKRGIQPDLG 430
>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 1627
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 144/332 (43%), Gaps = 19/332 (5%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED-KVDKLY-GALLN 145
AL + E M Q V + + +GK ++ A +F + E + D ++ ++N
Sbjct: 1274 ALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMIN 1333
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM-CLYTNTGQHEKIPDVLLDMKENGVP 204
+ G +D+++ L Q+M+ + S + YN I+ L+ + + ++P MKE+G+
Sbjct: 1334 FLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGIS 1393
Query: 205 PDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAII 264
P +F+Y I I+ + + + +L+EM+ + G A Y + KA
Sbjct: 1394 PSSFTYSILIDGFCKTNRMEKAMMLLEEMDEK-------GFPPCPAAYCSLIDALGKAKR 1446
Query: 265 YLKKCEDIVSKSKDALG------YNHLISHYASLGNKDEMMKFWG-LQKIKCKKQLNRDY 317
Y CE + + K+ G Y +I H G D+ + + + K+ C + Y
Sbjct: 1447 YDLACE-LFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVY-AY 1504
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
++ L + G L+EA + + D NIIL G ++ G +A +L + +
Sbjct: 1505 NALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQ 1564
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
P S++ + + E+A + MKE
Sbjct: 1565 STVRPDVVSYNTVLGALSHAGMFEEASKLMKE 1596
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 84/177 (47%), Gaps = 3/177 (1%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I L KR+ A ++ + + + S +AV + +GK L+ A F+ +N
Sbjct: 1437 LIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLG 1496
Query: 135 KVDKLYG--ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+Y AL++ R G++DE+LS M++M+E G +YN I+ TG +
Sbjct: 1497 CAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAM 1556
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTV 249
++L +MK++ V PD SY + + +++EM + D TYS++
Sbjct: 1557 EMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLG-FEYDLITYSSI 1612
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 89/420 (21%), Positives = 155/420 (36%), Gaps = 86/420 (20%)
Query: 67 ISELELQRVIRQLRSRKRFKHALQVSEWMSG---QGLAFSVHDHAVQLDLIGKVRGLESA 123
++ EL V+R L + K + A+ + + Q +A + + + L G+ E
Sbjct: 1147 VTPTELSDVVRMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQ---YEKV 1203
Query: 124 ETYFNSLNDE-----DKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNY--- 175
+N ++ E D V Y AL++ + + G D ++ L+ +MKE+G + Y
Sbjct: 1204 HQLYNEMSTEGHCFPDTVT--YSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTML 1261
Query: 176 ----------NGIMCLYTNTGQHEKIPDV----------------------LLDMKENGV 203
+G + L+ PDV +M+ G
Sbjct: 1262 IALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGC 1321
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMES---------------------------- 235
PD IN G L + QEME+
Sbjct: 1322 RPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVP 1381
Query: 236 -------QSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISH 288
+S IS TYS + + + EKA++ L++ ++ A Y LI
Sbjct: 1382 SWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPA-AYCSLIDA 1440
Query: 289 YASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEW-ELSCYCY 347
D + + K C R Y M+ L K G L++A M +E +L C
Sbjct: 1441 LGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGC-AP 1499
Query: 348 DFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECM 407
D N ++ G ++ GM+++A + ++ + + G P NS++II G A +A E +
Sbjct: 1500 DVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEML 1559
>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/349 (20%), Positives = 158/349 (45%), Gaps = 8/349 (2%)
Query: 95 MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDK--LYGALLNCYVREGL 152
M G++ +V + + ++ + ++ A+ F+ ++D +Y ++N + ++G
Sbjct: 133 METMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGY 192
Query: 153 VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
+ L QKMK +G + YN ++ Y G+ V ++ + GV + +Y I
Sbjct: 193 KKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNI 252
Query: 213 CINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDI 272
I + ++S E +L+ M+ ++HI+ T++ + + G +KA+ YL+K + +
Sbjct: 253 LIGGLCRKGQVSKAEGLLERMK-RAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLK-L 310
Query: 273 VSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEE 332
+ + YN LIS ++ +GN + + + + Y ++ + V+ ++E+
Sbjct: 311 IGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEK 370
Query: 333 AEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAA 392
A +M + D +++ G KG + +A + K +V+ P ++ +
Sbjct: 371 AYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMIN 430
Query: 393 GYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVE 441
GY + N KA + ++E + +N S +S+I D + +E
Sbjct: 431 GYCKECNSYKALKFLEEMV----KNGVTPNVASYISTIQILCKDGKSIE 475
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 119/255 (46%), Gaps = 6/255 (2%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE--DKVDKLYGALLN 145
A +V + +S +G+A + + + + + + + AE + + + + L++
Sbjct: 231 AFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMD 290
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
G +D++LS ++K+K +G + + YN ++ ++ G + +++ +M++ G+ P
Sbjct: 291 GLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISP 350
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
+Y I +N++ ++ + M+ + D TY + + I G +A
Sbjct: 351 SKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVP-DQHTYGVLIHGLCIKGNMVEASKL 409
Query: 266 LKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN-RDYITMLGSL 324
K ++ + D + YN +I+ Y N + +KF + +K N YI+ + L
Sbjct: 410 YKSMVEMHLQPNDVI-YNTMINGYCKECNSYKALKFLE-EMVKNGVTPNVASYISTIQIL 467
Query: 325 VKIGELEEAEKMLEE 339
K G+ EA+++L+E
Sbjct: 468 CKDGKSIEAKRLLKE 482
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 134/312 (42%), Gaps = 45/312 (14%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+Y L+N Y R V +L + +M E G + YN ++ + ++ +M
Sbjct: 401 IYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEM 460
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
E GV PD ++ I+ Y ++ ++ + M +S + D TY+T+ + + G
Sbjct: 461 VERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRS-LKPDVVTYNTLMDGFCKVGE 519
Query: 259 KEKA--IIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN 314
EKA + Y D++S+ + ++ LI+ + SLG E + W K K K
Sbjct: 520 MEKAKELWY-----DMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTL 574
Query: 315 RDYITMLGSLVKIGELEEAEKML-----EEWELSCYCYDFRV------------------ 351
T++ ++ G L +A L E C Y+ +
Sbjct: 575 VTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINN 634
Query: 352 -------PNI-----ILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNN 399
PN+ IL G+S+ G +++A+ VL +++ KG P ++++ + GY K+N
Sbjct: 635 MEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDN 694
Query: 400 MEKAFECMKEAL 411
M++AF E L
Sbjct: 695 MKEAFRVHDEML 706
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 141/327 (43%), Gaps = 18/327 (5%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLN 145
A +V E G +V+ + ++ + K L++ Y + + ++ L Y L+N
Sbjct: 208 AWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVN 267
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
Y R GLV E+ L+ M G YN ++ G +E+ VL +M G+ P
Sbjct: 268 AYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCP 327
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
+ ++ + + ++ E V EM Q + D ++S++ + G +A+ Y
Sbjct: 328 NAATFNPMLVESCRKEDVWEAERVFNEM-LQRGVVPDLISFSSIVGVFSRNGELGRALAY 386
Query: 266 LKKCEDIVSKSKDALGYNHLISHY-------ASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
+K + V D + Y LI+ Y +L ++EM++ + + Y
Sbjct: 387 FEKMKG-VGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVV-------TYN 438
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
T+L L + L++A+++ +E DF ++ GY + G + KA ++ + + +
Sbjct: 439 TLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLR 498
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAFE 405
P +++ + G+ MEKA E
Sbjct: 499 SLKPDVVTYNTLMDGFCKVGEMEKAKE 525
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 4/215 (1%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESA-ETYFNSLNDEDKVDKL-YGALLN 145
AL + E M+ + L V + +D KV +E A E +++ ++ E + + L+N
Sbjct: 488 ALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILIN 547
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
+ GLV E+ L +MKE G + + N I+ Y G K D L M GVPP
Sbjct: 548 GFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPP 607
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
D +Y INS+ ++ ME + + + TY+ + + G ++A +
Sbjct: 608 DCITYNTLINSFVKEENFDRAFFLINNMEERGLLP-NLVTYNAILGGFSRHGRMQEAEMV 666
Query: 266 LKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMK 300
L K D + D Y LI+ Y S N E +
Sbjct: 667 LHKMID-KGINPDKSTYTSLINGYVSKDNMKEAFR 700
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+N +V+E D + L+ M+E G + + YN I+ ++ G+ ++ VL M
Sbjct: 612 YNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMI 671
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMD 242
+ G+ PD +Y IN Y ++ + V EM + + D
Sbjct: 672 DKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPDD 714
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 84/438 (19%), Positives = 165/438 (37%), Gaps = 55/438 (12%)
Query: 33 PVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELE--LQRVIRQLRSRKRFKHALQ 90
P+ NL I+ P+ S+ L ++++ +K+ E + L R+IR + H
Sbjct: 82 PLLLPNLIQTIAS-TSPNPSIIATLIHFLVQSKKLPEAQSLLLRIIR----KSGVSHVEV 136
Query: 91 VSEWMSGQGLAFSVHDHAVQLDLIGKV----RGLESAETYFNSLNDEDKVDKLYG--ALL 144
+ +S + + + V DL+ + R L F L + ALL
Sbjct: 137 IDSLISTSSSNLNSNQNVVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALL 196
Query: 145 NCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVP 204
V+ G VD + + + + G+ + N ++ G+ + + L +M+E GV
Sbjct: 197 GAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVY 256
Query: 205 PDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA-- 262
D +Y +N+Y R +S ++ M + + TY+ + N G E+A
Sbjct: 257 ADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKG-LKPGLFTYNALINGLCKEGSYERAKR 315
Query: 263 ------------------IIYLKKC--EDIVSKSK------------DALGYNHLISHYA 290
+ ++ C ED+ + D + ++ ++ ++
Sbjct: 316 VLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFS 375
Query: 291 SLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFR 350
G + ++ K Y ++ + ++ A KM E D
Sbjct: 376 RNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVV 435
Query: 351 VPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEA 410
N +L G + M++ AD + KE+V++G P + + + GY NM K A
Sbjct: 436 TYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTK-------A 488
Query: 411 LAVHEENKFWRPKPSLVS 428
L++ E KP +V+
Sbjct: 489 LSLFETMTLRSLKPDVVT 506
>gi|357504477|ref|XP_003622527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497542|gb|AES78745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 721
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 104/460 (22%), Positives = 189/460 (41%), Gaps = 24/460 (5%)
Query: 32 KPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQV 91
+P +RNN S+ + ++ P D+ L + L V + LR K A
Sbjct: 49 QPRSRNN--SKTAKTIANLINYKPWSDE--LLSSFTTSLSKTTVFQTLRHIKVPTKAFLF 104
Query: 92 SEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSL----NDEDKV-DKLYGALLNC 146
W+ +G + + + + L+++G+ + L A + S+ N E K+ D+ + +L+
Sbjct: 105 FNWIHEKGFSHNPQTYFIMLEILGREKNLNIARNFLYSIEKRSNGEVKLEDRFFNSLIRS 164
Query: 147 YVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM-KENGVPP 205
Y GL ES+ L + MK +G + +N ++ + G+ +V +M K GV P
Sbjct: 165 YGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEMLKTYGVKP 224
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
D ++Y I I + S + +EM S D TY+T+ + AG K K
Sbjct: 225 DTYTYNILIRGFCKNSMVDEGFYFFKEMTS-FDCDPDVVTYNTLVDGLCRAG-KIKVAHN 282
Query: 266 L-----KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITM 320
L KKC+D+ S D + Y LI Y DE + + K Y T+
Sbjct: 283 LVNGMSKKCKDL---SPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTL 339
Query: 321 LGSLVKIGELEEAEKMLEEWEL-SCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
+ L + + ++ +++LE+ + D N ++ + G +++A V + + K
Sbjct: 340 IKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLINSHCCAGNLDEAFKVFENMKKLE 399
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVS--SILDWLGDN 437
+ S+S++ K + KA E + PKP S + +L +N
Sbjct: 400 VSADSASYSVLIRTLCQKGDYGKAEMLFDELFEKEILLSSYGPKPLAASYKCMFQYLCEN 459
Query: 438 RDVEEVEAFVSSL-KIKVQKRNMYHALTEAHIRSGQEVDG 476
++ E + L K Q Y + H + G +G
Sbjct: 460 GKTKKAERVLRQLMKRGTQDPLSYQIVILGHCKEGSYENG 499
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 129/304 (42%), Gaps = 37/304 (12%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+ Y R+ VDE+L ++++M G + + YN ++ + +K+ ++L MK
Sbjct: 301 YTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQMK 360
Query: 200 -ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
+ G PD ++ INS+ L V + M+ + +S D +YS +I L
Sbjct: 361 GDGGSIPDACTFNTLINSHCCAGNLDEAFKVFENMK-KLEVSADSASYSV-----LIRTL 414
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
+K Y + L K+ ++ +G K L Y
Sbjct: 415 CQKG------------------DYGKAEMLFDELFEKEILLSSYG------PKPLAASYK 450
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
M L + G+ ++AE++L + + D I++LG+ ++G E +L ++++
Sbjct: 451 CMFQYLCENGKTKKAERVLRQL-MKRGTQDPLSYQIVILGHCKEGSYENGYGLLVWMLRR 509
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNR 438
P + + + G+ K+ A E +++ L ++P+ S SIL+ L +
Sbjct: 510 DFLPDIDIYDYLIDGFLRKDKPLLAKETLEKMLKSS-----YKPQTSTWHSILNRLLEQG 564
Query: 439 DVEE 442
V E
Sbjct: 565 CVHE 568
>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/349 (20%), Positives = 158/349 (45%), Gaps = 8/349 (2%)
Query: 95 MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDK--LYGALLNCYVREGL 152
M G++ +V + + ++ + ++ A+ F+ ++D +Y ++N + ++G
Sbjct: 133 METMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGY 192
Query: 153 VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
+ L QKMK +G + YN ++ Y G+ V ++ + GV + +Y I
Sbjct: 193 KKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNI 252
Query: 213 CINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDI 272
I + ++S E +L+ M+ ++HI+ T++ + + G +KA+ YL+K + +
Sbjct: 253 LIGGLCRKGQVSKAEGLLERMK-RAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLK-L 310
Query: 273 VSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEE 332
+ + YN LIS ++ +GN + + + + Y ++ + V+ ++E+
Sbjct: 311 IGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEK 370
Query: 333 AEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAA 392
A +M + D +++ G KG + +A + K +V+ P ++ +
Sbjct: 371 AYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMIN 430
Query: 393 GYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVE 441
GY + N KA + ++E + +N S +S+I D + +E
Sbjct: 431 GYCKECNSYKALKFLEEMV----KNGVTPNVASYISTIQILCKDGKSIE 475
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 119/255 (46%), Gaps = 6/255 (2%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE--DKVDKLYGALLN 145
A +V + +S +G+A + + + + + + + AE + + + + L++
Sbjct: 231 AFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMD 290
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
G +D++LS ++K+K +G + + YN ++ ++ G + +++ +M++ G+ P
Sbjct: 291 GLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISP 350
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
+Y I +N++ ++ + M+ + D TY + + I G +A
Sbjct: 351 SKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVP-DQHTYGVLIHGLCIKGNMVEASKL 409
Query: 266 LKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN-RDYITMLGSL 324
K ++ + D + YN +I+ Y N + +KF + +K N YI+ + L
Sbjct: 410 YKSMVEMHLQPNDVI-YNTMINGYCKECNSYKALKFLE-EMVKNGVTPNVASYISTIQIL 467
Query: 325 VKIGELEEAEKMLEE 339
K G+ EA+++L+E
Sbjct: 468 CKDGKSIEAKRLLKE 482
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 153/339 (45%), Gaps = 17/339 (5%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +L+ + ++G V E+L L+ +M++MG + + YN ++ +++G+ E+ +++ +M
Sbjct: 193 YNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEML 252
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL- 258
G+ ++Y I Y + +L + +EM S+ + TY+T I+ GL
Sbjct: 253 RLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVP-TLVTYNT-----IMYGLC 306
Query: 259 KEKAIIYLKKCEDI-VSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR 315
K + +K D+ V+K+ D + YN LI Y LGN E + + +
Sbjct: 307 KWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVV 366
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
Y T++ L ++G+L+ A ++ +E D I++ G+ + G + A + E+
Sbjct: 367 TYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEM 426
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLG 435
+ +G P ++ G + KAF +E LA + + P + +D L
Sbjct: 427 LNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLA-----RGFPPDLITYNVFIDGLH 481
Query: 436 DNRDVEEVEAFVSSLKIK--VQKRNMYHALTEAHIRSGQ 472
+++E V + V Y ++ AH+ +G
Sbjct: 482 KLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGH 520
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 76/362 (20%), Positives = 147/362 (40%), Gaps = 54/362 (14%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM---CLYTNTGQHEKIPDVLL 196
Y L+ Y +G +DE+ L ++M G+ + + YN IM C + K+ DV++
Sbjct: 263 YDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMV 322
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
+ + PD SY I Y + + E+ + + TY+T+ +
Sbjct: 323 N---KNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVP-SVVTYNTLIDGLCRM 378
Query: 257 GLKEKAIIYLKKCEDIVSK---SKDALGYNHLISHYASLGNK-------DEMM------- 299
G + A+ + +D + K D + L+ + LGN DEM+
Sbjct: 379 GDLDVAM----RLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPD 434
Query: 300 ------------------KFWGLQKIKCKKQLNRDYIT---MLGSLVKIGELEEAEKMLE 338
K +G+Q+ + D IT + L K+G L+EA ++++
Sbjct: 435 RFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVK 494
Query: 339 EWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKN 398
+ + D I+ + G + KA AV E++ KG P+ +++++ YA +
Sbjct: 495 KMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRG 554
Query: 399 NMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRN 458
++ A E +HE K P +++++ L R +++ F + ++ K N
Sbjct: 555 RLKLAILHFFE---MHE--KGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPN 609
Query: 459 MY 460
Y
Sbjct: 610 KY 611
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 155/379 (40%), Gaps = 44/379 (11%)
Query: 74 RVIRQLRSR-KRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLND 132
RV+R LR R A +V M G+ +V + LD K ++ A +
Sbjct: 159 RVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQK 218
Query: 133 EDKV--DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEK 190
+ D Y L+N G ++++ L+Q+M +G SA Y+ ++ Y GQ ++
Sbjct: 219 MGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDE 278
Query: 191 IPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYST-V 249
+ +M G P +Y + +S +L M +++ + D +Y+T +
Sbjct: 279 ASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMP-DLVSYNTLI 337
Query: 250 ANYYIIAGLKEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGN-------KDEMMK- 300
Y + + E +++ + + +V + YN LI +G+ KDEM+K
Sbjct: 338 YGYTRLGNIGEAFLLFAELRFRGLVP---SVVTYNTLIDGLCRMGDLDVAMRLKDEMIKH 394
Query: 301 --------FWGLQKIKCK------------KQLNRD-------YITMLGSLVKIGELEEA 333
F L + CK + LNR YIT + +K+G+ +A
Sbjct: 395 GPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKA 454
Query: 334 EKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAG 393
M EE + D N+ + G + G +++A ++K+++ G P +++ I
Sbjct: 455 FGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHA 514
Query: 394 YADKNNMEKAFECMKEALA 412
+ ++ KA E L+
Sbjct: 515 HLMAGHLRKARAVFLEMLS 533
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 170/427 (39%), Gaps = 86/427 (20%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+Y L+ +V+EG E++ +++ M + G L YN ++ + + E+ D L++M
Sbjct: 483 IYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEM 542
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEM------------------------- 233
E G+ P+ ++Y I+ Y E+ + +EM
Sbjct: 543 IERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGST 602
Query: 234 -ESQS--------HISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS--KDALGY 282
E+ S + D TYS + + + G + A+ L + + K D Y
Sbjct: 603 TEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELL---SEFLEKGLVPDVFTY 659
Query: 283 NHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT---MLGSLVKIGELEEAEKMLEE 339
N +IS + G + K + L + C+K ++ + IT ++ L K GE+E A ++ +
Sbjct: 660 NSIISGFCKQGG---IGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDG 716
Query: 340 WELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNN 399
++ I+ GY + G + KA + E+ KG P +S + G + N
Sbjct: 717 IPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGN 776
Query: 400 MEKAFECMKEALA---------------------VHEEN--------KFWRPKPSLVSSI 430
EKA E++ V E N K +P + +
Sbjct: 777 TEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTIL 836
Query: 431 LDWLGDNRDVEEVEAFVSSLKIKVQKRN-MYHALTEAHIRSGQEVDG-------LLESMK 482
+D+ ++E E F + +QKRN M +ALT + SG + G L + M
Sbjct: 837 IDYHCKTGFLKEAEQFF----VDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMI 892
Query: 483 ADDIDED 489
A DI+ D
Sbjct: 893 AKDIEPD 899
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/341 (20%), Positives = 148/341 (43%), Gaps = 21/341 (6%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+N + R G E L+ +M+E G S + YN ++ G+ ++ ++ M
Sbjct: 239 YTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMD 298
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQ----SHISMDWGTYSTVANYYII 255
+ G+ D F+Y I I+ +G + + + +L+EM S+ H++ Y+ + + ++
Sbjct: 299 KKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVA-----YTALIDGFMR 353
Query: 256 AGLKEKAIIYLKKCEDIVSKSK--DALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQL 313
G +A + E+++++ + YN L+ G+ ++ + K
Sbjct: 354 QGDSGEA---FRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPD 410
Query: 314 NRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
+ Y M+ +K + +L E + S +I+ G + G IE A V +
Sbjct: 411 TQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFE 470
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDW 433
+V G P ++ + G+ + ++A +K + K +P +S++
Sbjct: 471 IMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVM-----DKKGVQPDVLCYNSVIIG 525
Query: 434 LGDNRDVEEVEAFVSSLKIKVQKRNMYH--ALTEAHIRSGQ 472
L +R +EE + ++ + + K N+Y AL + +SG+
Sbjct: 526 LCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGE 566
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 145/356 (40%), Gaps = 13/356 (3%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
++ L++ Y ++GL DE++S K G L NG++ + E M
Sbjct: 168 VFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGM 227
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
E V D ++Y IN++ + +L EME + S TY+ V AG
Sbjct: 228 LEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKG-CSPSLVTYNVVIGGLCRAGE 286
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
++A LKK D D Y+ LI + E K K + Y
Sbjct: 287 VDEA-FELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYT 345
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
++ ++ G+ EA ++ EE + N ++ G + G +EKADA+L E++
Sbjct: 346 ALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMV 405
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWL---G 435
G P +++ + GY + N + +K+ L+ +++ P I++ L G
Sbjct: 406 GIKPDTQTYNNMIEGYLKEQNTSR----VKDLLSEMKKSNLV-PTAYTCGMIINGLCRHG 460
Query: 436 DNRDVEEVEAFVSSLKIKVQKRNMYHALTEAHIRSG--QEVDGLLESMKADDIDED 489
D V + SL +K +Y L + H++ G QE +L+ M + D
Sbjct: 461 SIEDASRVFEIMVSLGVKPNAV-IYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPD 515
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/275 (18%), Positives = 114/275 (41%), Gaps = 3/275 (1%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
+ Y AL++ +R G + ++ L+ + E G YN I+ + G K +
Sbjct: 622 RTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEY 681
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
M + G+ P+ +Y IN E+ + + + ++ + TY+T+ + Y +G
Sbjct: 682 MCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKG-LAHNAVTYATIIDGYCKSG 740
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
KA + + D+ Y+ LI GN ++ + + L+ ++
Sbjct: 741 NLSKAFRLFDE-MTLKGVPPDSFVYSALIDGCRKEGNTEKALSLF-LESVQKGFASTSSL 798
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
++ K G++ EA ++LE+ D I++ + + G +++A+ ++ K
Sbjct: 799 NALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQK 858
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
+ P +++ + +GY + F E +A
Sbjct: 859 RNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIA 893
>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
[Vitis vinifera]
Length = 811
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 103/440 (23%), Positives = 184/440 (41%), Gaps = 79/440 (17%)
Query: 40 YSRISPLG--------DPDVSLTPVLDQWVLE--GQKISE---------LELQRVIRQLR 80
+ R+SP G DP +L + D+ +LE Q+ E L++ +++ L
Sbjct: 80 HGRLSPPGQRILQTLIDPTFNLAQI-DELLLELFEQQPGESDFSVESLSLDVLGIVKGLG 138
Query: 81 SRKRFKHALQVSEWMSGQG---LAFSVHDHAVQLDLIGKVRGLESAETYFNSL-NDEDKV 136
K+ AL+V EW+ + L + AV + ++GK + +A + ++L D V
Sbjct: 139 FYKKCDTALRVFEWVRNRKESELLLNGSIIAVIISILGKGGRVSAAASLLHNLCKDGFDV 198
Query: 137 D-KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQ-------- 187
D Y +++ + G E++ + +KM+E+G + + YN I+ +Y G
Sbjct: 199 DVYAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKMGMPWNKMVGL 258
Query: 188 ----------------------------HEKIPDVLLDMKENGVPPDNFSYRICINSYG- 218
+E+ VL +MK G PD +Y ++ YG
Sbjct: 259 VDRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGK 318
Query: 219 ARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS-- 276
+R +ME VLQEME TY+++ + Y GL E A L+ +V K
Sbjct: 319 SRRSKEAME-VLQEMEGNG-CPPSIVTYNSLISAYARDGLLEDA---LELKNQMVEKGIK 373
Query: 277 KDALGYNHLISHYASLG-NKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKI----GELE 331
D Y L+S + G +K + F ++ CK I +L+K+ G+
Sbjct: 374 PDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPN-----ICTFNALIKMHGNRGKFT 428
Query: 332 EAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIA 391
E K+ E+ + D N +L + Q GM + V KE+ + G P ++++ +
Sbjct: 429 EMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLI 488
Query: 392 AGYADKNNMEKAFECMKEAL 411
+ Y+ + ++A K L
Sbjct: 489 SSYSRCGSFDQAMAVYKRML 508
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 151/350 (43%), Gaps = 27/350 (7%)
Query: 38 NLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSG 97
N+Y + +G P + ++D+ G +I R ++ A V + M
Sbjct: 243 NVYGK---MGMPWNKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKL 299
Query: 98 QGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDE 155
G + + LD+ GK R + A + + Y +L++ Y R+GL+++
Sbjct: 300 AGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLED 359
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
+L L +M E G Y ++ + G+ + + +M+ G P+ ++ I
Sbjct: 360 ALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIK 419
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDI-VS 274
+G R + + M V +++++ S D T++T+ + + G+ + K+ +
Sbjct: 420 MHGNRGKFTEMMKVFEDIKT-FQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFV 478
Query: 275 KSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD---YITMLGSLVKIGELE 331
+D +N LIS Y+ G+ D+ M + K + +N D Y +L +L + G +
Sbjct: 479 PERDT--FNTLISSYSRCGSFDQAMAVY---KRMLEAGVNPDLSSYNAVLAALARGGLWK 533
Query: 332 EAEKMLEEWELSCYCYDFRV-PN-----IILLGYSQKGMIEKADAVLKEI 375
++EK+L E + D R PN +L Y+ IE+ A+ +EI
Sbjct: 534 QSEKVLAEMK------DGRCKPNELTYCSLLHAYANGKEIERMCALAEEI 577
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 173/387 (44%), Gaps = 29/387 (7%)
Query: 102 FSVHDHAVQLDLIGKVRGL------ESAETYFNSLNDEDKVDKLY-GALLNCYV----RE 150
FSV ++ LD++G V+GL ++A F + + + + L G+++ + +
Sbjct: 121 FSVE--SLSLDVLGIVKGLGFYKKCDTALRVFEWVRNRKESELLLNGSIIAVIISILGKG 178
Query: 151 GLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSY 210
G V + SL+ + + G Y ++ +T+ G++ + V M+E G P +Y
Sbjct: 179 GRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLITY 238
Query: 211 RICINSYGARS-ELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC 269
+ +N YG + M ++ M+S + I+ D TY+T+ + L E+A LK+
Sbjct: 239 NVILNVYGKMGMPWNKMVGLVDRMKS-AGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEM 297
Query: 270 EDIVSKSKDALGYNHLISHYA-SLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIG 328
+ + S D + YN L+ Y S +K+ M ++ C + Y +++ + + G
Sbjct: 298 K-LAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSI-VTYNSLISAYARDG 355
Query: 329 ELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWS 388
LE+A ++ + D +L G+ + G + A + +E+ +G P +++
Sbjct: 356 LLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFN 415
Query: 389 IIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVS--SILDWLGDNRDVEEVEAF 446
+ + ++ E + V E+ K ++ P +V+ ++L G N EV
Sbjct: 416 ALIKMHGNRGK-------FTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGV 468
Query: 447 VSSLKIK--VQKRNMYHALTEAHIRSG 471
+K V +R+ ++ L ++ R G
Sbjct: 469 FKEMKRAGFVPERDTFNTLISSYSRCG 495
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 4/161 (2%)
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
A+++ Y R +V ++ ++ MK G S YN +M +Y+ + E+ ++L ++
Sbjct: 626 AMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAK 685
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
G+ PD SY I +Y + VL EM +S + D TY+T Y + +
Sbjct: 686 GIRPDIISYNTVIYAYCRNGRMRDASRVLSEMR-ESGPAPDIITYNTFIASYAADSMFVE 744
Query: 262 AIIYLKKCEDIVSKSK-DALGYNHLISHYASLGNKDEMMKF 301
AI + C I K + YN ++ Y L +DE F
Sbjct: 745 AIDVV--CYMIKHGCKPNQSTYNSIVDWYCKLNRRDEASMF 783
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 69/347 (19%), Positives = 133/347 (38%), Gaps = 42/347 (12%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ LL+ + + G+ E + ++MK G +N ++ Y+ G ++ V M
Sbjct: 449 WNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRML 508
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYY------ 253
E GV PD SY + + E VL EM+ + TY ++ + Y
Sbjct: 509 EAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMK-DGRCKPNELTYCSLLHAYANGKEI 567
Query: 254 ---------IIAGLKEKAIIYLK-------KCEDIVSKSKDALGYNHLISHYASLGNKDE 297
I +G+ E + LK KC D++ +++ A + +
Sbjct: 568 ERMCALAEEIYSGIIEPRAVLLKTLVLVNSKC-DLLMETERAFLELRQRGFSPDITTLNA 626
Query: 298 MMKFWGLQKIKCKKQLNRD-------------YITMLGSLVKIGELEEAEKMLEEWELSC 344
M+ +G +++ K D Y +++ + E +E++L E
Sbjct: 627 MVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKG 686
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
D N ++ Y + G + A VL E+ + G P +++ A YA + +A
Sbjct: 687 IRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIASYAADSMFVEAI 746
Query: 405 ECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK 451
+ + + +P S +SI+DW +E FV++L+
Sbjct: 747 D-----VVCYMIKHGCKPNQSTYNSIVDWYCKLNRRDEASMFVNNLR 788
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 120/274 (43%), Gaps = 16/274 (5%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+Y +L++ R G + E+L ++M+ G YN ++ + G +++ L M
Sbjct: 183 VYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLM 242
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
+ G PD F++ I I+ ++ + +L+ M + D TY+T+ N + G
Sbjct: 243 VDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGK-EPDILTYNTLMNGLCLVGQ 301
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
E A + D K + YN LI+ Y DE + + + K K Y
Sbjct: 302 LEDATKLFESLADRGIKL-NVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYN 360
Query: 319 TMLGSLVKIGELEEAEKMLEEWE-------LSCYCYDFRVPNIILLGYSQKGMIEKADAV 371
T++G+L + G + A+K+ E + LS YC ++L G + G +E+A +
Sbjct: 361 TLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYC-------VLLDGLCKNGHLEEAIDL 413
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
+ I K P +SI+ G +E+A++
Sbjct: 414 FQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWK 447
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 160/359 (44%), Gaps = 27/359 (7%)
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDK----- 138
R K AL+ + M G+G++ V+ + + + + GL T+F +L VD+
Sbjct: 196 RLKEALEFFKEMEGRGISADVYTYNSLIHGLSRA-GLWKEVTWFLNL----MVDRGFSPD 250
Query: 139 --LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
+ L++ +EG V E+ +++ M G L YN +M GQ E +
Sbjct: 251 AFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFE 310
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
+ + G+ + FSY I IN Y ++ + +EM + + TY+T+ +
Sbjct: 311 SLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKG-LKPSTVTYNTLIGALCQS 369
Query: 257 G---LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMK-FWGLQKIKCKKQ 312
G +K + ++ C + S Y L+ G+ +E + F ++K + K
Sbjct: 370 GRVRTAQKLFVEMQTCGQFLKLST----YCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPN 425
Query: 313 LNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
+ + +L + + G+LEEA K +E + D NI++ G KGM+ +A +L
Sbjct: 426 IEV-FSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLL 484
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSIL 431
++ +KG P ++++I +N + +A + ++E N+ + P ++ S +L
Sbjct: 485 WQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEM-----RNRNFSPDEAVTSMLL 538
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 151/361 (41%), Gaps = 25/361 (6%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ L++ R G VD +++L+ M G + +N ++ + +K +V M
Sbjct: 195 HNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMD 254
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ V PD S+ I I + E+ +EM+ Q ++ D ++S + + G
Sbjct: 255 QCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQ-QRGVTPDVVSFSCLIGLFSTRGKM 313
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGN-------KDEMMKFWGLQKIKCKKQ 312
+ A YL++ + + D + Y +I + G+ +DEM+ L +
Sbjct: 314 DHAAAYLREMKGL-GLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVV---- 368
Query: 313 LNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
Y T+L L K L +AE++L E + D ++ GY + G EKA +
Sbjct: 369 ---TYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLF 425
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILD 432
++ + P +++ + G K ++ KA E + +H F P S ++D
Sbjct: 426 DTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDD---MHAREIF--PNHVTYSILID 480
Query: 433 WLGDNRDVEEVEAFVSSLKIKVQKRNM--YHALTEAHIRSGQEVDG--LLESMKADDIDE 488
+ VEE F+ + K N+ Y+++ + + RSG G L+ M D+I
Sbjct: 481 SHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILP 540
Query: 489 D 489
D
Sbjct: 541 D 541
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 149/327 (45%), Gaps = 22/327 (6%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLN 145
A+ + + M+ +GL + L + K R + A+ F +++ + + L+
Sbjct: 211 AIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIG 270
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
+ R G V+E++ ++M++ G ++++ ++ L++ G+ + L +MK G+ P
Sbjct: 271 GFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVP 330
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
D Y + I + +S V EM + D TY+T+ N GL ++
Sbjct: 331 DGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLP-DVVTYNTLLN-----GLCKQH--R 382
Query: 266 LKKCEDIVSKSK------DALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD--- 316
L E+++++ K D + LI Y GN ++ ++ + ++L D
Sbjct: 383 LLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLF---DTLLHQRLRPDVVA 439
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y +++ + + G+L +A ++ ++ + +I++ + +KG +E+A L E+V
Sbjct: 440 YNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMV 499
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKA 403
KG P +++ I GY N++K
Sbjct: 500 SKGNLPNIMTYNSIIKGYCRSGNVKKG 526
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 150/350 (42%), Gaps = 26/350 (7%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I +R + HA M G GL V D + +IG G A + +L D
Sbjct: 303 LIGLFSTRGKMDHAAAYLREMKGLGL---VPDGVIYTMVIG---GFCRAGSMSEALRVRD 356
Query: 135 KVDKL--------YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTG 186
++ L Y LLN ++ + ++ L+ +MKE G + ++ Y G
Sbjct: 357 EMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDG 416
Query: 187 QHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTY 246
EK + + + PD +Y I+ + +L+ + +M ++ I + TY
Sbjct: 417 NFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHARE-IFPNHVTY 475
Query: 247 STVANYYIIAGLKEKAIIYLKKCEDIVSKSK--DALGYNHLISHYASLGNKDEMMKFWGL 304
S + + + G E+A +L +++VSK + + YN +I Y GN + +F L
Sbjct: 476 SILIDSHCEKGQVEEAFGFL---DEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQF--L 530
Query: 305 QKIKCKKQLNRDYIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQ 361
QK+ + + D IT ++ +K + A + E D N+I+ G+S+
Sbjct: 531 QKMM-QDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSE 589
Query: 362 KGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
+G +E+A V K++ G P ++ + G+ N ++AF+ E +
Sbjct: 590 QGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMM 639
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 70/348 (20%), Positives = 126/348 (36%), Gaps = 81/348 (23%)
Query: 208 FSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLK 267
++ I ++SY E + V+ EME + + D T++ + + AG + AI +
Sbjct: 158 YTLNIMVHSYCKSLEFDKADTVISEMEKRC-VFPDVVTHNVLIDARFRAGDVDAAIALVD 216
Query: 268 ----------------------------------KCEDIVSKSKDALGYNHLISHYASLG 293
+ D S + D +N LI + +G
Sbjct: 217 SMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVG 276
Query: 294 NKDEMMKFW-------------------GLQKIKCKKQ-------------LNRD---YI 318
+E MKF+ GL + K L D Y
Sbjct: 277 EVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYT 336
Query: 319 TMLGSLVKIGELEEAEKMLEEW-ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
++G + G + EA ++ +E L C D N +L G ++ + A+ +L E+ +
Sbjct: 337 MVIGGFCRAGSMSEALRVRDEMVGLGCL-PDVVTYNTLLNGLCKQHRLLDAEELLNEMKE 395
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDN 437
+G TP +++ + GY N EKA + L ++ RP +S++D +
Sbjct: 396 RGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLL-----HQRLRPDVVAYNSLIDGMCRK 450
Query: 438 RDVEEVEAFVSSLKIKVQKRN--MYHALTEAHIRSGQ--EVDGLLESM 481
D+ + + + N Y L ++H GQ E G L+ M
Sbjct: 451 GDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEM 498
>gi|449494638|ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 664
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 145/315 (46%), Gaps = 9/315 (2%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
++R+ S + K A++V + M G + LD + K ++ A + F +
Sbjct: 206 LMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVRF 265
Query: 135 KVD-KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPD 193
+ + + +LL + REG + E+ ++ ++KE G + YN ++ Y G+ D
Sbjct: 266 NPNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFD 325
Query: 194 VLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYY 253
+L +MK+ P+ S+ I I S+ ++ + EM+ S D TY+T+ + +
Sbjct: 326 LLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQG-SGCEADVVTYTTLISGF 384
Query: 254 IIAGLKEKAIIYLKKCEDIVSKSKDA--LGYNHLISHYASLGNKDEMMKFW-GLQKIKCK 310
G +KA L +D++ K D L Y ++ + +E M+ ++KI C
Sbjct: 385 CKWGNTDKAYEIL---DDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCV 441
Query: 311 KQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADA 370
LN Y TM+ + K+G+L+EA ++ E + +++ G+ +G + +A
Sbjct: 442 PDLN-IYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACD 500
Query: 371 VLKEIVKKGKTPTPN 385
KE+V++G P
Sbjct: 501 YFKEMVERGLLSAPQ 515
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 100/222 (45%), Gaps = 5/222 (2%)
Query: 189 EKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYST 248
+K +VL +M + G PD + + +++ + ++ ++M + + ++ T S
Sbjct: 217 KKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVRFNPNLRHFT-SL 275
Query: 249 VANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGN-KDEMMKFWGLQKI 307
+ + + E + ++ E D + YN+L+ YA G +D ++K+
Sbjct: 276 LYGWCREGKIMEAKHVLVQIKE--AGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKV 333
Query: 308 KCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEK 367
C + ++ S K +++EA ++ E + S D ++ G+ + G +K
Sbjct: 334 NCGPN-AASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDK 392
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
A +L ++++KG P+ S+ I + K +E+ E ++E
Sbjct: 393 AYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEE 434
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 130/279 (46%), Gaps = 10/279 (3%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
+ Y L++ +EG V E+ S++ M + YN +M Y + +K V
Sbjct: 518 RTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNA 577
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
M GV PD +Y I IN + + N+ +EM Q ++ D TYS++ + G
Sbjct: 578 MSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMH-QKNMVPDTVTYSSLVD-----G 631
Query: 258 L-KEKAIIYLKKCEDIV---SKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQL 313
L K I Y+ D + + D + YN LI G+ D+ + + K + +
Sbjct: 632 LCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPN 691
Query: 314 NRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
+ +L L K G L++A+++ ++ Y D + N+++ G+ ++G++E+A +L
Sbjct: 692 TFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLS 751
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
++ + G P ++ II K+ +KA + +++ +A
Sbjct: 752 KMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIA 790
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 90/482 (18%), Positives = 194/482 (40%), Gaps = 48/482 (9%)
Query: 48 DPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDH 107
D VSL+ VL + + G + L +I+ L + + K AL + + QG + +
Sbjct: 43 DDAVSLS-VLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSY 101
Query: 108 AVQLDLIGKVRGLESAETYFNSLNDE--DKVDKLYGALLNCYVREGLVDESLSLMQKMKE 165
A ++ + ++ +A + ++ ++Y +++ + LV E+ L +M
Sbjct: 102 ATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTV 161
Query: 166 MGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSS 225
G + + Y+ ++ + G+ ++ +L M + P+ +Y I +++ ++
Sbjct: 162 KGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKE 221
Query: 226 MENVLQEMESQSHISMDWGTYSTVAN-YYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNH 284
++VL M ++ + + TYST+ + Y+++ +K+ ++ ++ + D YN
Sbjct: 222 AKSVLAVML-KACVKSNVITYSTLMDGYFLVYEVKKAQHVF--NAMSLMGVTPDVHSYNI 278
Query: 285 LISHYASLGNKDEMMKFWG---LQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWE 341
+I+ + + D+ + + L + Q N+ +L S K+ A + E
Sbjct: 279 MINGFCKIKRVDKALNLFKEMILSRFPPIIQFNK----ILDSFAKMKHYSTAVSLSHRLE 334
Query: 342 LSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNME 401
L D NI++ + G I +VL +I+K+G P+ + + + G K ++
Sbjct: 335 LKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVK 394
Query: 402 KAFECMKEALAV------------------------------HEENKFWRPKPSLVSSIL 431
KA + LA + + +P + S+I+
Sbjct: 395 KALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTII 454
Query: 432 DWLGDNRDVEEVEAFVSSLKIKVQKRNM--YHALTEAHIRSG--QEVDGLLESMKADDID 487
D L + V E S + +K ++ Y L G +E GLL M I+
Sbjct: 455 DALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTIN 514
Query: 488 ED 489
D
Sbjct: 515 PD 516
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 79/425 (18%), Positives = 171/425 (40%), Gaps = 45/425 (10%)
Query: 86 KHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNS--LNDEDKVDKLYGAL 143
K A V MS G+ VH + + ++ K++ ++ A F L+ + + + +
Sbjct: 255 KKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQ-FNKI 313
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
L+ + + ++SL +++ G N ++ + + GQ VL + + G
Sbjct: 314 LDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGY 373
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAI 263
PP + I + ++ + ++ +Q ++ +Y+T+ N G AI
Sbjct: 374 PPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG-FQLNQVSYATLINGVCKIGDTRGAI 432
Query: 264 IYLKKCEDIVSK----------------------------------SKDALGYNHLISHY 289
L+K + ++K S D + Y+ LI +
Sbjct: 433 KLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGF 492
Query: 290 ASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDF 349
+G E + +K R Y ++ +L K G+++EA+ +L +C D
Sbjct: 493 CIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDV 552
Query: 350 RVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
N ++ GY ++KA V + G TP ++++I+ G+ +++A KE
Sbjct: 553 FTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKE 612
Query: 410 ALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNM--YHALTEAH 467
+H++N P SS++D L + + V + ++ + Q ++ Y++L +
Sbjct: 613 ---MHQKN--MVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGL 667
Query: 468 IRSGQ 472
++G
Sbjct: 668 CKNGH 672
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 152/334 (45%), Gaps = 46/334 (13%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
YG+L++ +EG ++E+ L KM E+G +A+ YN ++ Y N G E+ +M
Sbjct: 246 YGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMV 305
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ G+ P +Y + +++ + +++++EM + I D TY+ + N Y G
Sbjct: 306 KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIP-DAITYNILINGYSRCGNA 364
Query: 260 EKA---------------------IIY-------LKKCEDIVSK------SKDALGYNHL 285
++A +IY +K+ +D+ K S D + +N +
Sbjct: 365 KRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAM 424
Query: 286 ISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI---TMLGSLVKIGELEEAEKMLEEWEL 342
I + + GN + F L+++ +K + D + T++ + G++EEA +L+E +
Sbjct: 425 IDGHCANGNVER--AFMLLKEMD-RKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKX 481
Query: 343 SCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEK 402
D N ++ GY ++G I+ A V E++ G PT +++ + +
Sbjct: 482 RGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDL 541
Query: 403 AFECMKEALAVHEENKFWRPKPSLVSSILDWLGD 436
A E +KE + NK P S S+++ +G+
Sbjct: 542 AEELLKEMV-----NKGISPDDSTYLSLIEGMGN 570
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/344 (20%), Positives = 144/344 (41%), Gaps = 46/344 (13%)
Query: 150 EGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFS 209
EG + ++ + M+ +G + ++YN I+ Y++ G E +L M+ G+ PD+++
Sbjct: 186 EGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYT 245
Query: 210 YRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC 269
Y I+ L + +M + + TY+T+ + Y G E+A Y
Sbjct: 246 YGSLISGMCKEGRLEEASGLFDKMVEIGLVP-NAVTYNTLIDGYCNKGDLERAFSY---- 300
Query: 270 EDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGE 329
+DEM+K + + Y ++ +L G
Sbjct: 301 -------------------------RDEMVKKGIMPSVST-------YNLLVHALFMEGR 328
Query: 330 LEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSI 389
+ EA+ M++E D NI++ GYS+ G ++A + E++ KG PT +++
Sbjct: 329 MGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTS 388
Query: 390 IAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSS 449
+ + +N M++A + ++ L ++ P + ++++D N +VE +
Sbjct: 389 LIYVLSRRNRMKEADDLFEKIL-----DQGVSPDVIMFNAMIDGHCANGNVERAFMLLKE 443
Query: 450 LKIKVQKRN--MYHALTEAHIRSG--QEVDGLLESMKADDIDED 489
+ K + ++ L + R G +E LL+ MK I D
Sbjct: 444 MDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPD 487
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
++ A+++ + G V+ + L+++M + +N +M G+ E+ +L +M
Sbjct: 420 MFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEM 479
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMES 235
K G+ PD+ SY I+ YG R ++ V EM S
Sbjct: 480 KXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLS 516
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 150/340 (44%), Gaps = 19/340 (5%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +L+ + ++G+V E+L L+ +M+ MG + + YN ++ +++G+ E+ +++ DM
Sbjct: 205 YNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDML 264
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY-YIIAGL 258
G+ ++Y I Y + ++ + +EM S+ G TV Y I+ GL
Sbjct: 265 RLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSR-------GAVPTVVTYNTIMYGL 317
Query: 259 -KEKAIIYLKKCEDI-VSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN 314
K + +K D+ V+K+ D + YN LI Y LGN E + + +
Sbjct: 318 CKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSV 377
Query: 315 RDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
Y T++ L ++G+L+ A ++ +E D + G+ + G + A + E
Sbjct: 378 VTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDE 437
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWL 434
++ +G P ++ G + KAF +E LA + + P + +D L
Sbjct: 438 MLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLA-----RGFPPDLITYNVFIDGL 492
Query: 435 GDNRDVEEVEAFVSSLKIK--VQKRNMYHALTEAHIRSGQ 472
+++E V + V Y ++ AH+ +G
Sbjct: 493 HKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGH 532
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 73/362 (20%), Positives = 148/362 (40%), Gaps = 54/362 (14%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM---CLYTNTGQHEKIPDVLL 196
Y L+ Y +G ++E+ L ++M G+ + + YN IM C + K+ DV++
Sbjct: 275 YDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMV 334
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
+ + PD SY I Y + + E+ +S ++ TY+T+ +
Sbjct: 335 N---KNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRS-LAPSVVTYNTLIDGLCRL 390
Query: 257 GLKEKAIIYLKKCEDIVSK---SKDALGYNHLISHYASLGNK-------DEMM------- 299
G + A+ + +D + K D + + + +GN DEM+
Sbjct: 391 GDLDVAM----RLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPD 446
Query: 300 ------------------KFWGLQKIKCKKQLNRDYIT---MLGSLVKIGELEEAEKMLE 338
K +G+Q+ + D IT + L K+G L+EA ++++
Sbjct: 447 RFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVK 506
Query: 339 EWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKN 398
+ + D I+ + G + KA A+ E++ KG P+ +++++ YA +
Sbjct: 507 KMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRG 566
Query: 399 NMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRN 458
++ A E +HE K P +++++ L R +++ F + ++ K N
Sbjct: 567 RLKLAILHFFE---MHE--KGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPN 621
Query: 459 MY 460
Y
Sbjct: 622 KY 623
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 117/318 (36%), Gaps = 44/318 (13%)
Query: 28 YRAVKP--VARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRF 85
YR++ P V N L + LGD DV++ + D+ + G +R
Sbjct: 370 YRSLAPSVVTYNTLIDGLCRLGDLDVAMR-LKDEMIKHGPDPDVFTFTTFVRGFCKMGNL 428
Query: 86 KHALQVSEWMSGQGLA---FSVHDHAV-QLDLIGKVRGLESAETYFNSLNDEDKVDKLYG 141
A ++ + M +GL F+ V +L L + E D + Y
Sbjct: 429 PMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLIT--YN 486
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
++ + G + E+ L++KM G + Y I+ + G K + L+M
Sbjct: 487 VFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSK 546
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN---------- 251
G+ P +Y + I+SY R L EM + + + TY+ + N
Sbjct: 547 GIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKG-VHPNVITYNALINGLCKVRKMDQ 605
Query: 252 -YYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWG------L 304
Y A ++ K I S + Y LI+ +LG+ E ++ + +
Sbjct: 606 AYNFFAEMQAKGI------------SPNKYTYTILINENCNLGHWQEALRLYKDMLDREI 653
Query: 305 QKIKCK-----KQLNRDY 317
Q C K LN+DY
Sbjct: 654 QPDSCTHRSLLKHLNKDY 671
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 144/319 (45%), Gaps = 10/319 (3%)
Query: 98 QGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED--KVDKLYGALLNCYVREGLVDE 155
+GL ++ ++V +D K E A ++ + E+ D ++N + G E
Sbjct: 497 KGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSE 556
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
S ++K+ + G + + YN I+ + G V +M + GV P+ F+Y IN
Sbjct: 557 SQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLIN 616
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK 275
+ + + V+ EM+++ I +D Y + + + G A L + ++ V
Sbjct: 617 GFCKSNNMDLALKVMDEMKNKG-IELDVTVYCALIDGFCRKGDMVNASQLLSELQE-VGL 674
Query: 276 SKDALGYNHLISHYASLGNKDEMMKFWGL---QKIKCKKQLNRDYITMLGSLVKIGELEE 332
S + + Y+ +IS + L N + + + I C Q+ Y T++ L+K G+L
Sbjct: 675 SPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQI---YTTLISGLLKEGKLLF 731
Query: 333 AEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAA 392
A ++ E D ++++ G KG +E A +L+++ +K TPT ++ +
Sbjct: 732 ASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLIT 791
Query: 393 GYADKNNMEKAFECMKEAL 411
G+ + N+++AF E L
Sbjct: 792 GHFKEGNLQEAFRLHNEML 810
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 123/275 (44%), Gaps = 8/275 (2%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +LL+ +EG + E+ S+ +KM G S ++YN ++ + G + V ++M
Sbjct: 436 YNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEML 495
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E G+ P+ +Y + ++ Y + + + M ++ D+ T + + N AG
Sbjct: 496 EKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDF-TCNIIINGLCKAGRT 554
Query: 260 EKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWG-LQKIKCKKQLNRD 316
++ LKK +V + + YN +I + G+ + + + + KI +
Sbjct: 555 SESQDRLKK---LVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNV-FT 610
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y ++ K ++ A K+++E + D V ++ G+ +KG + A +L E+
Sbjct: 611 YTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQ 670
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
+ G +P +S + +G+ NME A K +
Sbjct: 671 EVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMI 705
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 63/326 (19%), Positives = 126/326 (38%), Gaps = 44/326 (13%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYG--ALLN 145
AL++ + M+ G+ + +AV ++ K ++ A +N + ++D ++ +L+
Sbjct: 348 ALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIR 407
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
Y++ +E+ L + G + YN ++ G+ + + M GV P
Sbjct: 408 GYLKARSPEEASKLFDEAVACG-IANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRP 466
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
SY I + + ++ S V EM + GLK I
Sbjct: 467 SVVSYNNMILGHCQQGDMDSANGVFVEMLEK--------------------GLKPNLIT- 505
Query: 266 LKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT--MLGS 323
Y+ L+ Y G D F +++ + D+ ++
Sbjct: 506 ----------------YSVLMDGYFKKG--DTEYAFGLYDRMRGENIAPSDFTCNIIING 547
Query: 324 LVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPT 383
L K G E++ L++ + N I+ G+ ++G + A AV E+ K G +P
Sbjct: 548 LCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPN 607
Query: 384 PNSWSIIAAGYADKNNMEKAFECMKE 409
+++ + G+ NNM+ A + M E
Sbjct: 608 VFTYTNLINGFCKSNNMDLALKVMDE 633
>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 784
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 116/256 (45%), Gaps = 12/256 (4%)
Query: 155 ESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICI 214
+ L+ KM+ G +A+ YN ++ Y G+ + + L M+E+G PD ++ I
Sbjct: 370 KGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLI 429
Query: 215 NSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVS 274
N Y LS ++ EM S+ + M+ T +T+ + + G ++ Y + + S
Sbjct: 430 NGYCKAGRLSEAFRMMDEM-SRKGLKMNSVTLNTI--LHTLCGERKLDDAY----KLLSS 482
Query: 275 KSK-----DALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGE 329
SK D + Y LI Y G E MK W K K Y TM+G L G+
Sbjct: 483 ASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGK 542
Query: 330 LEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSI 389
+++ L E S D N I+LGY ++G +EKA ++VKK P + +I
Sbjct: 543 TDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNI 602
Query: 390 IAAGYADKNNMEKAFE 405
+ G + ++KA +
Sbjct: 603 LLRGLCTEGMLDKALK 618
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 143/312 (45%), Gaps = 23/312 (7%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+YG + E + E++ L+ KMK+ F ++YN I+ + G+ + D+LLDM
Sbjct: 219 IYGCCI-----ENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDM 273
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
K NG+ P+ ++ I ++ Y L V+ M +Q+++ D TY+ +I GL
Sbjct: 274 KNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLM-AQNNVLPDVWTYN-----MLIGGL 327
Query: 259 -KEKAIIYLKKCEDIVSKSK---DALGYNHLISHYASLGNKDEMMKFWGLQKIKCK--KQ 312
K+ I + +D + K D + YN LI+ + F + K++ K K
Sbjct: 328 CKDGKIDEAFRLKDEMENLKLLPDVVTYNTLIN--GCFDCSSSLKGFELIDKMEGKGVKP 385
Query: 313 LNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
Y ++ VK G+++ A L + E S + D N ++ GY + G + +A ++
Sbjct: 386 NAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMM 445
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILD 432
E+ +KG + + I + ++ A++ + A + ++ + S + I+
Sbjct: 446 DEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSA----SKRGYFVDEVSYGTLIMG 501
Query: 433 WLGDNRDVEEVE 444
+ D + VE ++
Sbjct: 502 YFKDGKSVEAMK 513
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 123/262 (46%), Gaps = 16/262 (6%)
Query: 84 RFKHALQVSEWMSGQGLAF-SVHDHAVQLDLIGKVRGLESAETYFNSLNDEDK-VDKL-Y 140
R A ++ + MS +GL SV + + L G+ R L+ A +S + VD++ Y
Sbjct: 437 RLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGE-RKLDDAYKLLSSASKRGYFVDEVSY 495
Query: 141 GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKE 200
G L+ Y ++G E++ L +MKE S + YN ++ ++G+ ++ D L ++ E
Sbjct: 496 GTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLE 555
Query: 201 NGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKE 260
+G+ PD +Y I Y ++ +M +S D T + + G+ +
Sbjct: 556 SGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKS-FKPDLFTCNILLRGLCTEGMLD 614
Query: 261 KAIIYLKKCEDIVSKSK--DALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD-- 316
KA LK +SK K DA+ YN +IS L +D + + L +K+L D
Sbjct: 615 KA---LKLFNTWISKGKAIDAVTYNTIIS---GLCKEDRFEEAFDLLAEMEEKKLGPDCY 668
Query: 317 -YITMLGSLVKIGELEEAEKML 337
Y +L +L G ++EAE+ +
Sbjct: 669 TYNAILSALADAGRMKEAEEFM 690
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 134/279 (48%), Gaps = 12/279 (4%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
YG+L++ +EG ++E+ L KM E+G +A+ YN ++ Y N G E+ +M
Sbjct: 300 YGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMV 359
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ G+ P +Y + +++ + +++++EM + I D TY+ + N Y G
Sbjct: 360 KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIP-DAITYNILINGYSRCGNA 418
Query: 260 EKAIIYLKKCEDIVSKSKDA--LGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
+KA +++SK + + Y LI L ++ M + L + + ++ D
Sbjct: 419 KKA---FDLHNEMLSKGIEPTHVTYTSLI---YVLSRRNRMKEADDLFEKILDQGVSPDV 472
Query: 318 I---TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
I M+ G +E A +L+E + D N ++ G ++G +E+A +L E
Sbjct: 473 IMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDE 532
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAV 413
+ ++G P S++ + +GY + +++ AF E L++
Sbjct: 533 MKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSI 571
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 88/424 (20%), Positives = 173/424 (40%), Gaps = 51/424 (12%)
Query: 72 LQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLN 131
L RV +LR R A + M +G+ + L L K+ +E A + +
Sbjct: 163 LVRVCCELR---RADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMF 219
Query: 132 DEDKVDKLY--GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHE 189
+Y ++N +EG + ++ + M+ +G + ++YN I+ Y++ G E
Sbjct: 220 RLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIE 279
Query: 190 KIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTV 249
+L M+ G+ PD+++Y I+ L + +M + + TY+T+
Sbjct: 280 GARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVP-NAVTYNTL 338
Query: 250 ANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
+ Y G E+A Y +DEM+K + +
Sbjct: 339 IDGYCNKGDLERAFSY-----------------------------RDEMVKKGIMPSVS- 368
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKAD 369
Y ++ +L G + EA+ M++E D NI++ GYS+ G +KA
Sbjct: 369 ------TYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAF 422
Query: 370 AVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSS 429
+ E++ KG PT +++ + + +N M++A + ++ L ++ P + ++
Sbjct: 423 DLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKIL-----DQGVSPDVIMFNA 477
Query: 430 ILDWLGDNRDVEEVEAFVSSLKIKVQKRN--MYHALTEAHIRSG--QEVDGLLESMKADD 485
++D N +VE + + K + ++ L + R G +E LL+ MK
Sbjct: 478 MVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRG 537
Query: 486 IDED 489
I D
Sbjct: 538 IKPD 541
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
++ A+++ + G V+ + L+++M + +N +M G+ E+ +L +M
Sbjct: 474 MFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEM 533
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMES 235
K G+ PD+ SY I+ YG R ++ V EM S
Sbjct: 534 KRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLS 570
>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 917
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 153/340 (45%), Gaps = 20/340 (5%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTG-QHEKIPDVLLDM 198
+ AL++ Y R GL +E++S+ MKE G + + YN ++ G + +++ +M
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 199 KENGVPPDNFSYR--ICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
+ N V PD ++ + + S G E + N+ EM S I D +Y+T+ +
Sbjct: 331 QRNCVQPDRITFNSLLAVCSRGGLWE--AARNLFDEM-SNRRIEQDVFSYNTLLDAICKG 387
Query: 257 GLKEKA--IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN 314
G + A I+ + I+ + + Y+ +I +A G DE + +G + L+
Sbjct: 388 GQMDLAFEILAQMPAKRIM---PNVVSYSTVIDGFAKAGRFDEALNLFGEMRY-LNIALD 443
Query: 315 R-DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
R Y T+L K+G EEA +L E D N +L GY ++G ++ V
Sbjct: 444 RVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFA 503
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDW 433
E+ ++ P ++S + GY+ ++A E +E ++ R L S+++D
Sbjct: 504 EMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREF-----KSAGLRADVVLYSALIDA 558
Query: 434 LGDNRDVEEVEAFVSSLKIKVQKRNM--YHALTEAHIRSG 471
L N V + + + + N+ Y+++ +A RS
Sbjct: 559 LCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSA 598
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 119/264 (45%), Gaps = 2/264 (0%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ +LL R GL + + +L +M +YN ++ GQ + ++L M
Sbjct: 342 FNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMP 401
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ P+ SY I+ + N+ EM +I++D +Y+T+ + Y G
Sbjct: 402 AKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYL-NIALDRVSYNTLLSIYTKVGRS 460
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
E+A+ L++ + K KD + YN L+ Y G DE+ K + K + Y T
Sbjct: 461 EEALDILREMASVGIK-KDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYST 519
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
++ K G +EA ++ E++ + D + + ++ + G++ A +++ E+ K+G
Sbjct: 520 LIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG 579
Query: 380 KTPTPNSWSIIAAGYADKNNMEKA 403
+P +++ I + ME++
Sbjct: 580 ISPNVVTYNSIIDAFGRSATMERS 603
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 105/237 (44%), Gaps = 27/237 (11%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ALL Y ++G DE + +MK + L Y+ ++ Y+ G +++ +V + K
Sbjct: 482 YNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFK 541
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G+ D Y I++ + S +++ EM ++ IS + TY+++ + + +
Sbjct: 542 SAGLRADVVLYSALIDALCKNGLVGSAVSLIDEM-TKEGISPNVVTYNSIIDAFGRSATM 600
Query: 260 EKAIIY-----LKKCEDIVSKSKDALGYNHLISHYASLGNK--DEMMKFW--GLQKIKCK 310
E++ Y L +S+ + G N +I + L ++ + M K G+Q++ C
Sbjct: 601 ERSADYSNGGSLPFSSSALSELTETEG-NRVIQLFGQLTSEGNNRMTKDCKEGMQELSCI 659
Query: 311 KQLNR------------DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNII 355
++ R + +L + + E+A +LEE L +D +V ++
Sbjct: 660 LEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRL----FDNKVYGVV 712
>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
Length = 1202
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 141/312 (45%), Gaps = 18/312 (5%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLN 145
L++ M ++ +V + V +D + KVR ++ AE F+ + + L Y L++
Sbjct: 571 GLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLID 630
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
Y ++G ++S + ++MK S + +N ++ G E +VL +MK+ G P
Sbjct: 631 GYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVP 690
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
D F++ I + Y + + + V E S + M+ T S + N G EKA
Sbjct: 691 DAFTFSILFDGYSSNDKADAALGVY-ETAVDSGLKMNAYTCSILLNALCKEGQIEKA--- 746
Query: 266 LKKCEDIVSKS------KDALGYNHLISHYASLGN-KDEMMKFWGLQKIKCKKQLNRDYI 318
E+I+ + + + YN +I Y+ G+ MK ++K K + Y
Sbjct: 747 ----EEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPD-HLAYN 801
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
++ + ++G++E AE+ + + +L NI++ GY +K +K +LKE+
Sbjct: 802 CLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDN 861
Query: 379 GKTPTPNSWSII 390
G P S+ +
Sbjct: 862 GTMPNVVSYGTL 873
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 133/308 (43%), Gaps = 6/308 (1%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV--DKLYGALLN 145
AL V E GL + + ++ L+ + K +E AE + V + LY +++
Sbjct: 711 ALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMID 770
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
Y R+G + + + M++ G L YN ++ + G E + MK GV P
Sbjct: 771 GYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSP 830
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
+Y I I YG + E ++L+EME + + +Y T+ N +A I
Sbjct: 831 SVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMP-NVVSYGTLINCLCKGSKLLEAQIV 889
Query: 266 LKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR-DYITMLGSL 324
+ ED S + YN LI S G ++ +F + K +LN Y T++ L
Sbjct: 890 KRDMED-RGVSPNVRIYNMLIDGCCSKGKIEDAFRF-SEEMFKKGIELNLVTYNTLIDGL 947
Query: 325 VKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTP 384
G+L EAE ML E D N ++ GY G +++ A+ +E+ G PT
Sbjct: 948 SMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTL 1007
Query: 385 NSWSIIAA 392
++ ++ +
Sbjct: 1008 KTYHLLIS 1015
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 76/370 (20%), Positives = 139/370 (37%), Gaps = 43/370 (11%)
Query: 79 LRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLE-SAETYFNSLNDEDKVD 137
L K A + + +G+ S + LD + K + + + N L + +
Sbjct: 492 LNESKMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPS 551
Query: 138 K-LYGALLNCYVREGLVDESLSLMQKMK-------------------------------- 164
K +YG + V+ V + L L +MK
Sbjct: 552 KFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFD 611
Query: 165 EMGS---FGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARS 221
EM + S + YN ++ Y G EK V MK + + P ++ +
Sbjct: 612 EMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAG 671
Query: 222 ELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS--KDA 279
+ ENVL EM+ Q + D T+S + + Y +KA L E V +A
Sbjct: 672 MVEDAENVLTEMKDQGFVP-DAFTFSILFDGY---SSNDKADAALGVYETAVDSGLKMNA 727
Query: 280 LGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEE 339
+ L++ G ++ + G + K Y TM+ + G+L A ++
Sbjct: 728 YTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDA 787
Query: 340 WELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNN 399
E D N ++ + + G +E A+ + ++ KG +P+ +++I+ GY K
Sbjct: 788 MEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYE 847
Query: 400 MEKAFECMKE 409
+K F+ +KE
Sbjct: 848 FDKCFDLLKE 857
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 113/287 (39%), Gaps = 19/287 (6%)
Query: 152 LVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYR 211
++ E+ L ++ G F S+ + ++ T Q +V L++ E+ P F Y
Sbjct: 497 MISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYG 556
Query: 212 ICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCED 271
I + S++ + M+ IS Y+ +I GL + + +K E
Sbjct: 557 KAIQAAVKLSDVGKGLELFNRMK-HDRISPTVFIYNV-----LIDGLCK--VRQMKDAEQ 608
Query: 272 IVSKS------KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLV 325
+ + + YN LI Y GN ++ K K + + T+L L
Sbjct: 609 LFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLF 668
Query: 326 KIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPN 385
K G +E+AE +L E + + D +I+ GYS + A V + V G
Sbjct: 669 KAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAY 728
Query: 386 SWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILD 432
+ SI+ + +EKA E + +A K P L ++++D
Sbjct: 729 TCSILLNALCKEGQIEKAEEILGREMA-----KGLVPNEVLYNTMID 770
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 145/344 (42%), Gaps = 11/344 (3%)
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
ALL+ + G D S + M G S YN ++ G E + MKE
Sbjct: 225 ALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEA 284
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
G PD +Y I+ +G L + ++M+ + D TY+ + N + K
Sbjct: 285 GFTPDIVTYNSLIDGHGKLGLLDECICIFEQMK-DADCDPDVITYNALINCFCKFERMPK 343
Query: 262 AIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITML 321
A +L + + K + + Y+ I + G E +KF+ + Y +++
Sbjct: 344 AFEFLHEMKANGLKP-NVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLI 402
Query: 322 GSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKT 381
+ K G L EA K++EE + + +L G ++G +++A+ V + ++ G
Sbjct: 403 DANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVA 462
Query: 382 PTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVE 441
P +++ + G+ ME A + +KE + K +P L +IL L + +E
Sbjct: 463 PNQETYTALVHGFIKAKEMEYAKDILKEM-----KEKCIKPDLLLYGTILWGLCNESRLE 517
Query: 442 EVEAFVSSLKIKVQKRN--MYHALTEAHIRSGQEVDG--LLESM 481
E + + +K N +Y L +A+ +SGQ + LLE M
Sbjct: 518 EAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEM 561
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 144/344 (41%), Gaps = 15/344 (4%)
Query: 72 LQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLN 131
L +V R SRK FK M G+ SV + + +D + K LE A + F +
Sbjct: 230 LSKVGRGDLSRKFFKD-------MGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMK 282
Query: 132 DEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHE 189
+ + Y +L++ + + GL+DE + + ++MK+ + YN ++ + +
Sbjct: 283 EAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMP 342
Query: 190 KIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTV 249
K + L +MK NG+ P+ +Y I+++ L +M + ++ TY+++
Sbjct: 343 KAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEF-TYTSL 401
Query: 250 ANYYIIAGLKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKI 307
+ AG +A LK E+I+ + + Y L+ G E + +
Sbjct: 402 IDANCKAGNLAEA---LKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLN 458
Query: 308 KCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEK 367
Y ++ +K E+E A+ +L+E + C D + IL G + +E+
Sbjct: 459 AGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEE 518
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
A ++ EI + G ++ + Y +A ++E L
Sbjct: 519 AKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEML 562
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 92/464 (19%), Positives = 188/464 (40%), Gaps = 17/464 (3%)
Query: 26 RAYRAV-KPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKR 84
R +R KP + N L R+S +G D+S D G K S +I L
Sbjct: 212 RKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGA-AGIKRSVFTYNIMIDYLCKEGD 270
Query: 85 FKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGA 142
+ A + M G + + +D GK+ L+ F + D D + Y A
Sbjct: 271 LEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNA 330
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
L+NC+ + + ++ + +MK G + + Y+ + + G ++ +DM+
Sbjct: 331 LINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVA 390
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG-LKEK 261
+ P+ F+Y I++ L+ +++E+ Q+ I ++ TY+ + + G +KE
Sbjct: 391 LTPNEFTYTSLIDANCKAGNLAEALKLVEEI-LQAGIKLNVVTYTALLDGLCEEGRMKEA 449
Query: 262 AIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITML 321
++ V+ +++ Y L+ + + K KC K Y T+L
Sbjct: 450 EEVFRAMLNAGVAPNQET--YTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTIL 507
Query: 322 GSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKT 381
L LEEA+ ++ E + S + + ++ Y + G +A +L+E++ G
Sbjct: 508 WGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLI 567
Query: 382 PTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVE 441
T ++ + G +++A + +P ++ ++++D L N E
Sbjct: 568 ATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIG-----LQPNVAVYTALVDGLCKNNCFE 622
Query: 442 EVEAFVSSL--KIKVQKRNMYHALTEAHIRSG--QEVDGLLESM 481
+ + K + + Y AL + +++ G QE L + M
Sbjct: 623 VAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRM 666
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 73/148 (49%), Gaps = 2/148 (1%)
Query: 95 MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV-DKL-YGALLNCYVREGL 152
MS GL +V + +D + K E A+ F+ + D+ + DK+ Y AL++ ++ G
Sbjct: 596 MSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGN 655
Query: 153 VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
+ E+L+L +M E+G Y ++ +++GQ +K ++L +M GV PD Y
Sbjct: 656 LQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMC 715
Query: 213 CINSYGARSELSSMENVLQEMESQSHIS 240
I Y A ++ + EM + I+
Sbjct: 716 LIKKYYALGKVDEALELQNEMAKRGMIT 743
>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 500
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 124/269 (46%), Gaps = 10/269 (3%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+Y +++ +G V+ +L +++ MK+MG + YN ++ ++G +L DM
Sbjct: 186 IYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDM 245
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
G+ PD ++ I+ YG +L + EM +S ++ + TY+++ N I GL
Sbjct: 246 MRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRS-VNPNIVTYNSLINGLCIHGL 304
Query: 259 KEKAIIYLKKCEDI-VSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR 315
++A KK ++ VSK +A+ YN LI+ Y D+ MK +
Sbjct: 305 LDEA----KKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTF 360
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCY-DFRVPNIILLGYSQKGMIEKADAVLKE 374
Y T+ + G+ AEK+L +SC + D NI+L G G I KA L++
Sbjct: 361 TYNTLYQGYCQAGKFSAAEKVLGRM-VSCGVHPDMYTFNILLDGLCDHGKIGKALVRLED 419
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
+ K +++II G + +E A
Sbjct: 420 LQKSKTVVGIITYNIIIKGLCKADKVEDA 448
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 111/267 (41%), Gaps = 6/267 (2%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+G+L+N + E++SL+ ++ +G + + YN I+ GQ DVL MK
Sbjct: 152 FGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMK 211
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ G+ PD +Y I +L +M IS D T+S + + Y G +
Sbjct: 212 KMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMG-ISPDVITFSALIDVY---GKE 267
Query: 260 EKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
+ + K+ +++ +S + + YN LI+ G DE K + K Y
Sbjct: 268 GQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTY 327
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
T++ K +++ K+L D N + GY Q G A+ VL +V
Sbjct: 328 NTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVS 387
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAF 404
G P +++I+ G D + KA
Sbjct: 388 CGVHPDMYTFNILLDGLCDHGKIGKAL 414
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 143/335 (42%), Gaps = 51/335 (15%)
Query: 120 LESAETYFNSLNDEDKV--DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNG 177
L+ A YF + V + +Y L+N Y R G++ E+L + KM E G + YN
Sbjct: 341 LDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNT 400
Query: 178 IM----------------------------CLYTNT-------GQHEKIPDVLLDMKENG 202
I+ C +T G K + M +
Sbjct: 401 ILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKN 460
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQ----SHISMDWGTYSTVANYYIIAGL 258
+ PD +Y I I+ + +E+ + EM S+ +HIS Y+ + N Y G
Sbjct: 461 IKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHIS-----YAILVNGYCNLGF 515
Query: 259 KEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
+A + ++++ K + N +I Y G+ + +F G + +
Sbjct: 516 VSEA---FRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSIT 572
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y T++ VK +++A ++ + E D N+IL G+ ++G +++A+ +L++++
Sbjct: 573 YNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMI 632
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
++G P ++++ + GY ++N+++AF E L
Sbjct: 633 ERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEML 667
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 180/417 (43%), Gaps = 29/417 (6%)
Query: 88 ALQVSEWMSGQGLAFSVHDH-AVQLDLIGKVRGLESAETYFNSLNDEDKVDKL-YGALLN 145
A +V MSG+GL ++ + AV L K R + + + L+ D Y LL
Sbjct: 239 AFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLV 298
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
R E+ + M G ++++ ++ + + G ++ DMK +G+ P
Sbjct: 299 ESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVP 358
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
DN Y I IN Y +S + +M Q ++D Y+T+ N GL +K ++
Sbjct: 359 DNVIYTILINGYCRNGMMSEALEIRDKMLEQG-CALDVVAYNTILN-----GLCKKKLLA 412
Query: 266 LKKC--EDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT-- 319
+++V + D + LI + GN + + +G I +K + D +T
Sbjct: 413 DANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFG---IMTQKNIKPDIVTYN 469
Query: 320 -MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL-GYSQKGMIEKADAVLKEIVK 377
++ K E+E+A ++ E +S + + IL+ GY G + +A + E+++
Sbjct: 470 ILIDGFCKTTEMEKANELWNEM-ISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIR 528
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDN 437
KG PT + + + GY ++ KA E + + ++ + P +++++
Sbjct: 529 KGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMIS-----EGVGPDSITYNTLINGFVKG 583
Query: 438 RDVEEVEAFVSSLKIKVQKRNM--YHALTEAHIRSG--QEVDGLLESMKADDIDEDK 490
+++ ++ ++ K + ++ Y+ + R G QE + +L M ID D+
Sbjct: 584 EYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDR 640
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 121/276 (43%), Gaps = 8/276 (2%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+N Y REGL+ E+ +M M G + YN ++ G++ + V +M
Sbjct: 223 YNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEML 282
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G+ PD +Y + + +++ +M + +S D ++S++ G
Sbjct: 283 SIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRG-VSPDLISFSSLIGVSSRNGHL 341
Query: 260 EKAIIYLK--KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWG-LQKIKCKKQLNRD 316
++A++Y + K +V D + Y LI+ Y G E ++ + + C +
Sbjct: 342 DQALMYFRDMKTSGLVP---DNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDV-VA 397
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y T+L L K L +A + +E DF ++ G+ ++G + KA ++ +
Sbjct: 398 YNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMT 457
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
+K P +++I+ G+ MEKA E E ++
Sbjct: 458 QKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMIS 493
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 48/103 (46%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+N +V+ +D++ L+ KM+ G + YN I+ + G+ ++ +L M
Sbjct: 573 YNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMI 632
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMD 242
E G+ PD +Y IN Y ++ L EM + + D
Sbjct: 633 ERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPDD 675
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 172/398 (43%), Gaps = 25/398 (6%)
Query: 29 RAVKPVARN--NLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFK 86
R +P + L S +S LG +V++ + + + EG + + +I +L RF
Sbjct: 374 RGCRPNVQTYTALISGLSRLGKLEVAIG-LYHKMLKEGLVPNTVTYNALINELCVGGRFS 432
Query: 87 HALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALL 144
AL++ WM G G + + + + +E A F + + + Y L+
Sbjct: 433 TALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLI 492
Query: 145 NCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVP 204
N Y+ +G V+ + L+ MKE G YN ++ ++ G+ E +M E G+
Sbjct: 493 NGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLN 552
Query: 205 PDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY-YIIAGL-KEKA 262
P+ SY I+ + ++ ++L+ ME + G V +Y +I GL KE
Sbjct: 553 PNPVSYTTLIDGHSKDGKVDIALSLLERME-------EMGCNPNVESYNAVINGLSKENR 605
Query: 263 IIYLKK-CEDIVSKS--KDALGYNHLISHYASLGNKDEMMK-FWGLQKIKCKKQLNRDYI 318
+K C+ + + + + Y LI G K F ++K KC L Y
Sbjct: 606 FSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNL-YTYS 664
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
+++ L + G+ +EAE +L+E E D ++ G+ G I+ A +L+ +V
Sbjct: 665 SLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDV 724
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEE 416
G P ++S++ G ++K ++E +AV E
Sbjct: 725 GCKPNYRTYSVLLKG------LQKECLLLEEKVAVQHE 756
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 126/324 (38%), Gaps = 41/324 (12%)
Query: 118 RGLESAETYFNSLNDE--DKVDKLYGALLNCYVREGLVDESLSLMQ-------------- 161
R L+ A F+ + E D Y L+N EG VDE+L +++
Sbjct: 289 RNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTY 348
Query: 162 ---------------------KMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKE 200
+MK+ G + Y ++ + G+ E + M +
Sbjct: 349 TLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLK 408
Query: 201 NGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKE 260
G+ P+ +Y IN S+ + ME ++ + TY+ + + G E
Sbjct: 409 EGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLA-NTQTYNEIIKGLCLGGDIE 467
Query: 261 KAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITM 320
KA++ +K + + YN LI+ Y + GN + + L K + Y +
Sbjct: 468 KAMVLFEKMLKM-GPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNEL 526
Query: 321 LGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL-GYSQKGMIEKADAVLKEIVKKG 379
+ K G+LE A +E + C V L+ G+S+ G ++ A ++L+ + + G
Sbjct: 527 VSGFSKWGKLESASFYFQEM-VECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMG 585
Query: 380 KTPTPNSWSIIAAGYADKNNMEKA 403
P S++ + G + +N +A
Sbjct: 586 CNPNVESYNAVINGLSKENRFSEA 609
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/264 (18%), Positives = 112/264 (42%), Gaps = 26/264 (9%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y A++N +E E+ + KM E G + + Y ++ G+ + + DM+
Sbjct: 593 YNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDME 652
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ P+ ++Y I + E +L+EME + ++ D T++++ + +++ G
Sbjct: 653 KRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKG-LAPDEVTFTSLIDGFVVLGRI 711
Query: 260 EKAIIYLKKCEDIVSKS-------------------KDALGYNHLISHYASLGNKDEMMK 300
+ A + L++ D+ K ++ + H + S KD +
Sbjct: 712 DHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFE 771
Query: 301 FWG-----LQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNII 355
+ +I C+ L+ Y T++ L + G EAE+++++ + +C D + +
Sbjct: 772 IVSNLLARMSEIGCEPTLD-TYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSL 830
Query: 356 LLGYSQKGMIEKADAVLKEIVKKG 379
L+ + + ++ A + I KG
Sbjct: 831 LIAHCKNLEVDHALKIFHSIEAKG 854
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 72/350 (20%), Positives = 138/350 (39%), Gaps = 27/350 (7%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I+ R+ + + +SG G FS++ L + K +E A + + +
Sbjct: 176 MIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSG 235
Query: 135 KVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
L + L+N ++G V E+ ++ ++ + Y ++ + +
Sbjct: 236 IQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAF 295
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
V M + G P++ +Y IN + ++L+EM ++ G TV Y
Sbjct: 296 GVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEM-------IEKGIEPTVYTY 348
Query: 253 YI-IAGLKEKAIIYLKKCEDIVSKSK------DALGYNHLISHYASLGNKDEMMKFWGLQ 305
+ I L ++V++ K + Y LIS + LG + + GL
Sbjct: 349 TLPITALCAIEHEEEAI--ELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAI---GLY 403
Query: 306 KIKCKKQLNRDYIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQK 362
K+ L + +T ++ L G A K+ E + + N I+ G
Sbjct: 404 HKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLG 463
Query: 363 GMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADK---NNMEKAFECMKE 409
G IEKA + ++++K G PT +++ + GY K NN + + MKE
Sbjct: 464 GDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKE 513
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 125/277 (45%), Gaps = 12/277 (4%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +++ Y G + ++L LM M+ G + YN I+ L G+ + VL +M
Sbjct: 296 YSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMM 355
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ PDN Y I+ + + + EM S+ IS D+ TY+T+ + G
Sbjct: 356 SQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKK-ISPDYITYTTLIQGF---GQG 411
Query: 260 EKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
K I +++S+ D + Y LI Y G EM+ + L + + +
Sbjct: 412 GKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAG---EMVNAFSLHNEMVQMGMTPNI 468
Query: 318 IT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
+T ++ L K GEL+ A ++L+E + + N ++ G + G IE+A ++KE
Sbjct: 469 VTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKE 528
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
+ G P +++ + Y +++KA + ++E L
Sbjct: 529 MEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEML 565
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/312 (19%), Positives = 123/312 (39%), Gaps = 63/312 (20%)
Query: 101 AFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLM 160
AFS+H+ VQ+ + + YGAL++ + G +D + L+
Sbjct: 452 AFSLHNEMVQMGMTPNIVT--------------------YGALIDGLCKHGELDTANELL 491
Query: 161 QKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGAR 220
+M++ G + YN ++ G E+ ++ +M+ G+ PD +Y I++Y
Sbjct: 492 DEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRL 551
Query: 221 SELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDAL 280
++ +LQEM +D G TV
Sbjct: 552 GDIDKAHKLLQEM-------LDRGLQPTVVT----------------------------- 575
Query: 281 GYNHLISHYASLG---NKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKML 337
+N L++ + LG + D ++ W L+K + Y T++ + K+
Sbjct: 576 -FNVLMNGFCMLGMLEDGDRLLG-WMLEKGIVPDAIT--YNTLMKQHCIRNSMNTTTKIY 631
Query: 338 EEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADK 397
+ D NI++ G+ + +++A + KE+++KG PT S++ + + K
Sbjct: 632 KRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKK 691
Query: 398 NNMEKAFECMKE 409
+ +A E +E
Sbjct: 692 KKILEARELFEE 703
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 84/195 (43%), Gaps = 9/195 (4%)
Query: 208 FSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYII-------AGLKE 260
SY + + + LS + N + +E + ++G +Y II +KE
Sbjct: 217 LSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKE 276
Query: 261 KAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITM 320
+ ++ D S + D + Y+ +I Y LG + +K +IK K Y ++
Sbjct: 277 AHRLLMQM--DFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSI 334
Query: 321 LGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGK 380
+ L KIG+ EAEK+L E D V ++ G+ + G + A+ E++ K
Sbjct: 335 ILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKI 394
Query: 381 TPTPNSWSIIAAGYA 395
+P +++ + G+
Sbjct: 395 SPDYITYTTLIQGFG 409
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 63/333 (18%), Positives = 130/333 (39%), Gaps = 54/333 (16%)
Query: 165 EMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELS 224
E G + +YN I+ G+ ++ +L+ M PD SY I+ Y EL
Sbjct: 251 EYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELK 310
Query: 225 SMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNH 284
++ +M+ I GLK + YN
Sbjct: 311 KALKLMDDMQ--------------------IKGLK-----------------PNRYTYNS 333
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQL--NRDYITMLGSLVKIGELEEAEKMLEEWEL 342
+I +G E K L+++ +K + N Y T++ K+G + A K +E
Sbjct: 334 IILLLCKIGKSFEAEKV--LREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLS 391
Query: 343 SCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEK 402
D+ ++ G+ Q G + + + E++ +G P +++ + Y M
Sbjct: 392 KKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVN 451
Query: 403 AFECMKEALAVHEENKFWRPKPSLVS--SILDWLGDNRDVEEVEAFVSSLKIKVQKRN-- 458
AF ++H E P++V+ +++D L + +++ + ++ K + N
Sbjct: 452 AF-------SLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVC 504
Query: 459 MYHALTEAHIRSG--QEVDGLLESMKADDIDED 489
+Y+++ ++G ++ L++ M+ ID D
Sbjct: 505 IYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPD 537
>gi|302801852|ref|XP_002982682.1| hypothetical protein SELMODRAFT_421991 [Selaginella moellendorffii]
gi|300149781|gb|EFJ16435.1| hypothetical protein SELMODRAFT_421991 [Selaginella moellendorffii]
Length = 414
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/411 (19%), Positives = 172/411 (41%), Gaps = 45/411 (10%)
Query: 72 LQRVIRQLRSRKRFKHALQVSEWM-SGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSL 130
L VI +LR +F A ++ +WM + DH + L+L+G++ ++ ++ +
Sbjct: 6 LLNVIYKLRITAKFGQAREICDWMIRNKVFEIEESDHVLLLELVGRISKFQATRCFWE-M 64
Query: 131 NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEK 190
E + + Y A+L + R + + M +MK + YN ++ +Y + +K
Sbjct: 65 PAELRSEAAYTAMLQVFARWHAIPAAEDTMSEMKSLNLITRVEPYNIMLDMYKRKNEDDK 124
Query: 191 IPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVA 250
+ + ++ GV PD +Y I + A+ ++ + + E+
Sbjct: 125 VRAMYDELSSLGVAPDAHTYLIVLR---AKQKIGGFDGIEAEVRK--------------- 166
Query: 251 NYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCK 310
++ L + +++ +C ++ Y L + + + K
Sbjct: 167 --FLDEQLTSRQPLFIYEC---------------MLRIYTLLRDLTAIENLRSILLKTFK 209
Query: 311 KQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADA 370
K + Y +L + ++GE+E AE++ E + + + + ++ Y+ G +EKA+
Sbjct: 210 KFSSSSYNCLLDAYRQLGEVERAERLFNEIG-NKFTLNIQSYRAMIAVYASNGRMEKANE 268
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSS- 429
+ K++ + G P + + AGY D + A +A + + PKP ++
Sbjct: 269 LYKQLFRAGFECHPAIYHAMVAGYIDARDHSNALIQYGKAW---DRSLLGHPKPLRATTL 325
Query: 430 -ILDWLGDNRDVEEVEAFVSSLKIKVQKRN--MYHALTEAHIRSGQEVDGL 477
+L L + D E+ V LK + Q + +Y+ L +A+I++ V G
Sbjct: 326 LVLRVLAEQGDFSRAESIVRDLKRERQGSDVEVYNWLLKAYIKAEVPVFGF 376
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 145/344 (42%), Gaps = 11/344 (3%)
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
ALL+ + G D S + M G S YN ++ G E + MKE
Sbjct: 26 ALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEA 85
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
G PD +Y I+ +G L + ++M+ + D TY+ + N + K
Sbjct: 86 GFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKD-ADCDPDVITYNALINCFCKFERMPK 144
Query: 262 AIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITML 321
A +L + + K + + Y+ I + G E +KF+ + Y +++
Sbjct: 145 AFEFLHEMKANGLKP-NVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLI 203
Query: 322 GSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKT 381
+ K G L EA K++EE + + +L G ++G +++A+ V + ++ G
Sbjct: 204 DANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVA 263
Query: 382 PTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVE 441
P +++ + G+ ME A + +KE + K +P L +IL L + +E
Sbjct: 264 PNQETYTALVHGFIKAKEMEYAKDILKEM-----KEKCIKPDLLLYGTILWGLCNESRLE 318
Query: 442 EVEAFVSSLKIKVQKRN--MYHALTEAHIRSGQEVDG--LLESM 481
E + + +K N +Y L +A+ +SGQ + LLE M
Sbjct: 319 EAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEM 362
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 144/344 (41%), Gaps = 15/344 (4%)
Query: 72 LQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLN 131
L +V R SRK FK M G+ SV + + +D + K LE A + F +
Sbjct: 31 LSKVGRGDLSRKFFKD-------MGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMK 83
Query: 132 DEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHE 189
+ + Y +L++ + + GL+DE + + ++MK+ + YN ++ + +
Sbjct: 84 EAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMP 143
Query: 190 KIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTV 249
K + L +MK NG+ P+ +Y I+++ L +M + ++ TY+++
Sbjct: 144 KAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEF-TYTSL 202
Query: 250 ANYYIIAGLKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKI 307
+ AG +A LK E+I+ + + Y L+ G E + +
Sbjct: 203 IDANCKAGNLAEA---LKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLN 259
Query: 308 KCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEK 367
Y ++ +K E+E A+ +L+E + C D + IL G + +E+
Sbjct: 260 AGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEE 319
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
A ++ EI + G ++ + Y +A ++E L
Sbjct: 320 AKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEML 363
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 75/151 (49%), Gaps = 4/151 (2%)
Query: 94 WMSGQGL-AFSVHDHAVQL-DLIGKVRGLESAETYFNSLNDEDKV-DKL-YGALLNCYVR 149
+ SGQ A ++ + + L D + K E A+ F+ + D+ + DK+ Y AL++ ++
Sbjct: 347 FKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMK 406
Query: 150 EGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFS 209
G + E+L+L +M E+G Y ++ +++GQ +K ++L +M GV PD
Sbjct: 407 HGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVV 466
Query: 210 YRICINSYGARSELSSMENVLQEMESQSHIS 240
Y I Y A ++ + EM + I+
Sbjct: 467 YMCLIKKYYALGKVDEALELQNEMAKRGMIT 497
>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 604
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 144/332 (43%), Gaps = 19/332 (5%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED-KVDKLY-GALLN 145
AL + E M Q V + + +GK ++ A +F + E + D ++ ++N
Sbjct: 251 ALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMIN 310
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM-CLYTNTGQHEKIPDVLLDMKENGVP 204
+ G +D+++ L Q+M+ + S + YN I+ L+ + + ++P MKE+G+
Sbjct: 311 FLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGIS 370
Query: 205 PDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAII 264
P +F+Y I I+ + + + +L+EM+ + G A Y + KA
Sbjct: 371 PSSFTYSILIDGFCKTNRMEKAMMLLEEMDEK-------GFPPCPAAYCSLIDALGKAKR 423
Query: 265 YLKKCEDIVSKSKDALG------YNHLISHYASLGNKDEMMKFWG-LQKIKCKKQLNRDY 317
Y CE + + K+ G Y +I H G D+ + + + K+ C + Y
Sbjct: 424 YDLACE-LFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDV-YAY 481
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
++ L + G L+EA + + D NIIL G ++ G +A +L + +
Sbjct: 482 NALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQ 541
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
P S++ + + E+A + MKE
Sbjct: 542 STVRPDVVSYNTVLGALSHAGMFEEASKLMKE 573
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 84/177 (47%), Gaps = 3/177 (1%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I L KR+ A ++ + + + S +AV + +GK L+ A F+ +N
Sbjct: 414 LIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLG 473
Query: 135 KVDKLYG--ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+Y AL++ R G++DE+LS M++M+E G +YN I+ TG +
Sbjct: 474 CAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAM 533
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTV 249
++L +MK++ V PD SY + + +++EM + D TYS++
Sbjct: 534 EMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLG-FEYDLITYSSI 589
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 89/418 (21%), Positives = 154/418 (36%), Gaps = 86/418 (20%)
Query: 67 ISELELQRVIRQLRSRKRFKHALQVSEWMSG---QGLAFSVHDHAVQLDLIGKVRGLESA 123
++ EL V+R L + K + A+ + + Q +A + + + L G+ E
Sbjct: 124 VTPTELSDVVRMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQ---YEKV 180
Query: 124 ETYFNSLNDE-----DKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNY--- 175
+N ++ E D V Y AL++ + + G D ++ L+ +MKE+G + Y
Sbjct: 181 HQLYNEMSTEGHCFPDTVT--YSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTML 238
Query: 176 ----------NGIMCLYTNTGQHEKIPDV----------------------LLDMKENGV 203
+G + L+ PDV +M+ G
Sbjct: 239 IALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGC 298
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMES---------------------------- 235
PD IN G L + QEME+
Sbjct: 299 RPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVP 358
Query: 236 -------QSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISH 288
+S IS TYS + + + EKA++ L++ ++ A Y LI
Sbjct: 359 SWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPA-AYCSLIDA 417
Query: 289 YASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEW-ELSCYCY 347
D + + K C R Y M+ L K G L++A M +E +L C
Sbjct: 418 LGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGC-AP 476
Query: 348 DFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
D N ++ G ++ GM+++A + ++ + + G P NS++II G A +A E
Sbjct: 477 DVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAME 534
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 90/237 (37%), Gaps = 37/237 (15%)
Query: 155 ESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICI 214
E S ++MKE G S+ Y+ ++ + T + EK +L +M E G PP +Y I
Sbjct: 356 EVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLI 415
Query: 215 NSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVS 274
++ G + QE++ S Y+ + + AG + AI + +
Sbjct: 416 DALGKAKRYDLACELFQELKENCG-SSSARVYAVMIKHLGKAGRLDDAINMFDEMNKL-G 473
Query: 275 KSKDALGYNHLISHYASLGNKDEMMK-FWGLQKIKCKKQLNR------------------ 315
+ D YN L+S A G DE + +Q+ C +N
Sbjct: 474 CAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAM 533
Query: 316 ----------------DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIIL 356
Y T+LG+L G EEA K+++E + YD + IL
Sbjct: 534 EMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSIL 590
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 146/337 (43%), Gaps = 44/337 (13%)
Query: 103 SVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQK 162
+V H + L + L+ A +F+ ++ V YG +++ Y G ++ ++ L+ +
Sbjct: 254 NVCSHNILLKALLSAGRLKDACQHFDEMSSPPDV-VTYGTMVHGYCVRGELENAVKLLDE 312
Query: 163 MKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSE 222
M G +A Y ++ L N GQ VL DM +GV D + I+ + ++ +
Sbjct: 313 MAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGD 372
Query: 223 LSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG-LKEKAIIYLKKCEDIVSKS--KDA 279
L++ + +EM+ + ++ D T++ + N AG LKE + +++V K D
Sbjct: 373 LAAARRLFEEMQKRG-LAADRVTHTALINGLCRAGELKEADRVL----QEMVDKGLDVDV 427
Query: 280 LGYNHLISHYASLGNKDEMMK----------------FWGLQKIKCKK------------ 311
+ Y LI Y GN E + + L CK+
Sbjct: 428 VTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHE 487
Query: 312 ------QLN-RDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGM 364
+LN Y +++ L K G LE+A +++ E E + + D ++ + G
Sbjct: 488 MCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGE 547
Query: 365 IEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNME 401
++A +L+E++ KG P+ +++++ G+ +E
Sbjct: 548 FDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVE 584
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 144/346 (41%), Gaps = 22/346 (6%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
VL+ + G + + VI S+ A ++ E M +GLA H ++ +
Sbjct: 344 VLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLC 403
Query: 116 KVRGLESAETYFNSLNDED-KVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
+ L+ A+ + D+ VD + Y L++ Y + G + E+ + +M + +
Sbjct: 404 RAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVV 463
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
Y + G ++L +M G+ + ++Y IN L ++ EM
Sbjct: 464 TYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEM 523
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLG 293
E+ H + D TY+T+ + +G ++A L++ D K A YN L++ + G
Sbjct: 524 EAAGHRT-DVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIAT-YNVLMNGFCMSG 581
Query: 294 NKDEMMKF--WGLQKIKCKKQLNRDYITMLGSLVK-------IGELEEAEKMLEEWELSC 344
+ K W L+K R + SL+K + E K + E++
Sbjct: 582 RVEGGKKLLEWMLEKNV------RPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVA- 634
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSII 390
+ NI++ G+ + +++A +E+++KG T +S+S +
Sbjct: 635 --PNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSAL 678
>gi|15240649|ref|NP_199839.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170477|sp|Q9FGR7.1|PP426_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g50280, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 1006; Flags: Precursor
gi|9759030|dbj|BAB09399.1| unnamed protein product [Arabidopsis thaliana]
gi|332008538|gb|AED95921.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 723
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/302 (20%), Positives = 131/302 (43%), Gaps = 38/302 (12%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
++G L+ + EGL +E+L + +M++ G + + YN +M Y + E++ + +M
Sbjct: 346 VFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEM 405
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEME---------SQSHISMDWG----- 244
++ G+ P +Y I +++Y R + +E +L+EME S + + +G
Sbjct: 406 RDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKM 465
Query: 245 ---------------------TYSTVANYYIIAGLKEKAIIYLKK-CEDIVSKSKDALGY 282
+Y+ + + Y ++G EKA ++ C++ + S + Y
Sbjct: 466 SDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVET--Y 523
Query: 283 NHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWEL 342
++ + G+ ++M+ W L + K Y T+L K G EA ++ E+
Sbjct: 524 TSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSK 583
Query: 343 SCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEK 402
N+++ Y++ G K +LKE+ P ++S + + + ++
Sbjct: 584 MGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKR 643
Query: 403 AF 404
AF
Sbjct: 644 AF 645
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 22/148 (14%)
Query: 87 HALQVSEW----------MSGQGLAFSVHDHAVQLDLI------GKVRGLESAETYFNSL 130
HA VS W M +G+ SV + LD GK+ E + L
Sbjct: 493 HAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKL-----MEIWKLML 547
Query: 131 NDEDKVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHE 189
++ K ++ Y LL+ + ++GL E+ ++ + +MG S + YN +M Y GQ
Sbjct: 548 REKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDA 607
Query: 190 KIPDVLLDMKENGVPPDNFSYRICINSY 217
K+P +L +M + PD+ +Y I ++
Sbjct: 608 KLPQLLKEMAALNLKPDSITYSTMIYAF 635
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 140/347 (40%), Gaps = 29/347 (8%)
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
L RE + D L L+ + + F YN + + + +++ +V M +
Sbjct: 244 LFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDKIN 303
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWG--TYSTVANYYIIAGLKE 260
V PDN + I I + R S + V + E S + W + + + GLKE
Sbjct: 304 VYPDNVTCAILITTL--RKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKE 361
Query: 261 KAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITM 320
+A++ + E +S + + YN L+ Y + +E+ + + K K Y +
Sbjct: 362 EALVIQTEMEKKGIRS-NTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNIL 420
Query: 321 LGSLVKIGELEEAEKMLEEWELSCYCYDFRV-PN-------IILLGYSQKGMIEKADAVL 372
+ + + + + E +L E E D + PN I G ++K ADA L
Sbjct: 421 MDAYARRMQPDIVETLLREME------DLGLEPNVKSYTCLISAYGRTKKMSDMAADAFL 474
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILD 432
+ + K G P+ +S++ + Y+ EKA+ +E + +P +S+LD
Sbjct: 475 R-MKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMC-----KEGIKPSVETYTSVLD 528
Query: 433 WL---GDNRDVEEVEAFVSSLKIKVQKRNMYHALTEAHIRSGQEVDG 476
GD + E+ + KIK R Y+ L + + G ++
Sbjct: 529 AFRRSGDTGKLMEIWKLMLREKIK-GTRITYNTLLDGFAKQGLYIEA 574
>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Vitis vinifera]
Length = 725
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 176/407 (43%), Gaps = 21/407 (5%)
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYF-NSLNDEDKVDK-LYG 141
R + AL + + M +G A +V+ + + +GK +E A + F N L + K D L
Sbjct: 280 RVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLIN 339
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM-CLYTNTGQHEKIPDVLLDMKE 200
L+N + G + +++ L ++M+ + + + YN ++ L+ + + + MKE
Sbjct: 340 NLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKE 399
Query: 201 NGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKE 260
NGV P +F+Y I I+ + + + +L+EM+ + Y ++ N A E
Sbjct: 400 NGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCP-AAYCSLINALGKAKRYE 458
Query: 261 KAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWG-LQKIKCKKQLNRDYIT 319
A ++ + S A Y +I H G E + + ++K+ C + Y
Sbjct: 459 AANELFQELRENCGYS-SARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDV-YAYNA 516
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
++ +V++G +EA +L E + D NIIL G+++ G + A + +
Sbjct: 517 LMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSK 576
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLG---- 435
P S++ + + E+A + MKE +K + SSIL+ +G
Sbjct: 577 IKPDVVSYNTVLGCLSRAGMFEEAAKLMKEM-----NSKGFEYDLITYSSILEAVGKIDE 631
Query: 436 DNRDVEEVEAFVSSLKIKVQKRNMYHALTEAHIRSGQE-----VDGL 477
D+ + + ++KI R H +E +RS VDGL
Sbjct: 632 DHTPAGQTVMHIVNIKIINLVRREGHVSSEYLLRSTDPECQCCVDGL 678
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 168/410 (40%), Gaps = 58/410 (14%)
Query: 114 IGKVRGLESAETYFNSL--NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGS 171
GK+ +SA + F+ + N K+Y +L Y + G V+++L L+Q+MKE G +
Sbjct: 240 FGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALT 299
Query: 172 ALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQ 231
Y ++ G+ E+ + ++M + G PD IN G L+ + +
Sbjct: 300 VYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFE 359
Query: 232 EMESQSHISMDWGTYSTV--ANYYIIAGLKEKAIIYLKKCEDIVSKSK------------ 277
EMES + + TY+TV A + A E + Y K E+ V S
Sbjct: 360 EMESL-QCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCK 418
Query: 278 --------------DALGYNHLISHYASLGNKDEMMKFWG-----LQKIK--CKKQLNRD 316
D G+ + Y SL N K + Q+++ C R
Sbjct: 419 TNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARV 478
Query: 317 YITMLGSLVKIGELEEAEKMLEEW-ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
Y M+ L K G L EA + E +L C D N ++ G + GM ++A ++L+ +
Sbjct: 479 YAVMIKHLGKCGRLSEAVDLFNEMKKLGCN-PDVYAYNALMSGMVRVGMTDEAHSLLRTM 537
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVS--SILDW 433
+ G TP NS +II G+A + A E + K + KP +VS ++L
Sbjct: 538 EENGCTPDLNSHNIILNGFARTGGPKGAIE-------MFTRMKNSKIKPDVVSYNTVLGC 590
Query: 434 LGDNRDVEEVEAFVSSLKIKVQKRNM--YHALTEA-------HIRSGQEV 474
L EE + + K + ++ Y ++ EA H +GQ V
Sbjct: 591 LSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEAVGKIDEDHTPAGQTV 640
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 79/177 (44%), Gaps = 3/177 (1%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I L KR++ A ++ + + S +AV + +GK L A FN +
Sbjct: 447 LINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLG 506
Query: 135 KVDKLYG--ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+Y AL++ VR G+ DE+ SL++ M+E G ++N I+ + TG +
Sbjct: 507 CNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAI 566
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTV 249
++ MK + + PD SY + +++EM S+ D TYS++
Sbjct: 567 EMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKG-FEYDLITYSSI 622
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 94/439 (21%), Positives = 172/439 (39%), Gaps = 66/439 (15%)
Query: 67 ISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETY 126
I +L +++ L K AL + + G+ + + + + ++ + E
Sbjct: 157 IGPADLSEIVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHEL 216
Query: 127 FNSLNDE-----DKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCL 181
+N + +E D V Y AL+ + + G D ++SL +MKE G +A Y I+ +
Sbjct: 217 YNEMCNEGDCLPDTVT--YSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGI 274
Query: 182 YTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISM 241
Y G+ EK ++ +MKE G ++Y I G ++ ++ M
Sbjct: 275 YFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNM-------- 326
Query: 242 DWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMK- 300
LKE D + N+LI+ G + +K
Sbjct: 327 ----------------LKEGC-------------KPDVVLINNLINLLGKAGRLADAIKL 357
Query: 301 FWGLQKIKCKKQLNRDYITMLGSLVKI-GELEEA----EKMLEEWEL-SCYCYDFRVPNI 354
F ++ ++C + Y T++ +L + EA EKM E + S + Y +I
Sbjct: 358 FEEMESLQCTPNV-VTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTY-----SI 411
Query: 355 ILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVH 414
++ G+ + +EKA +L+E+ +KG P P ++ + E A E +E
Sbjct: 412 LIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQEL---- 467
Query: 415 EENKFWRPKPSLVSSILDWLGD-NRDVEEVEAFVSSLKIKVQKR-NMYHALTEAHIRSGQ 472
EN + + + ++ LG R E V+ F K+ Y+AL +R G
Sbjct: 468 RENCGYS-SARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGM 526
Query: 473 --EVDGLLESMKADDIDED 489
E LL +M+ + D
Sbjct: 527 TDEAHSLLRTMEENGCTPD 545
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 163/375 (43%), Gaps = 19/375 (5%)
Query: 29 RAVKPVARN--NLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFK 86
R +P + L S +S LG +V++ + + + EG + + +I +L RF
Sbjct: 332 RGCRPNVQTYTALISGLSRLGKLEVAIG-LYHKMLKEGLVPNTVTYNALINELCVGGRFS 390
Query: 87 HALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALL 144
AL++ WM G G + + + + +E A F + + + Y L+
Sbjct: 391 TALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLI 450
Query: 145 NCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVP 204
N Y+ +G V+ + L+ MKE G YN ++ ++ G+ E +M E G+
Sbjct: 451 NGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLN 510
Query: 205 PDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY-YIIAGL-KEKA 262
P+ SY I+ + ++ ++L+ ME + G V +Y +I GL KE
Sbjct: 511 PNPVSYTALIDGHSKDGKVDIALSLLKRME-------EMGCNPNVESYNAVINGLSKENR 563
Query: 263 IIYLKK-CEDIVSKS--KDALGYNHLISHYASLGNKDEMMK-FWGLQKIKCKKQLNRDYI 318
+K C+ +V + + + Y LI G K F ++K KC L Y
Sbjct: 564 FSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNL-YTYS 622
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
+++ L + G+ +EAE +L+E E D ++ G+ G I+ A +L+ +V
Sbjct: 623 SLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDM 682
Query: 379 GKTPTPNSWSIIAAG 393
G P ++S++ G
Sbjct: 683 GCKPNYRTYSVLLKG 697
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 126/324 (38%), Gaps = 41/324 (12%)
Query: 118 RGLESAETYFNSLNDE--DKVDKLYGALLNCYVREGLVDESLSLMQ-------------- 161
R L+ A F+ + E D Y L+N EG VDE+L +++
Sbjct: 247 RNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTY 306
Query: 162 ---------------------KMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKE 200
+MK+ G + Y ++ + G+ E + M +
Sbjct: 307 TLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLK 366
Query: 201 NGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKE 260
G+ P+ +Y IN S+ + ME ++ + TY+ + + G E
Sbjct: 367 EGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLA-NTQTYNEIIKGLCLGGDIE 425
Query: 261 KAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITM 320
KA++ +K + + YN LI+ Y + GN + + L K + Y +
Sbjct: 426 KAMVLFEKMLKM-GPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNEL 484
Query: 321 LGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL-GYSQKGMIEKADAVLKEIVKKG 379
+ K G+LE A +E + C V L+ G+S+ G ++ A ++LK + + G
Sbjct: 485 VSGFSKWGKLESASFYFQEM-VECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMG 543
Query: 380 KTPTPNSWSIIAAGYADKNNMEKA 403
P S++ + G + +N +A
Sbjct: 544 CNPNVESYNAVINGLSKENRFSEA 567
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 72/350 (20%), Positives = 138/350 (39%), Gaps = 27/350 (7%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I+ R+ + + +SG G FS++ L + K +E A + + +
Sbjct: 134 MIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSG 193
Query: 135 KVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
L + L+N ++G V E+ ++ ++ + Y ++ + +
Sbjct: 194 IQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAF 253
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
V M + G P++ +Y IN + ++L+EM ++ G TV Y
Sbjct: 254 GVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEM-------IEKGIEPTVYTY 306
Query: 253 YI-IAGLKEKAIIYLKKCEDIVSKSK------DALGYNHLISHYASLGNKDEMMKFWGLQ 305
+ I L ++V++ K + Y LIS + LG + + GL
Sbjct: 307 TLPITALCAIEHEEEAI--ELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAI---GLY 361
Query: 306 KIKCKKQLNRDYIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQK 362
K+ L + +T ++ L G A K+ E + + N I+ G
Sbjct: 362 HKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLG 421
Query: 363 GMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADK---NNMEKAFECMKE 409
G IEKA + ++++K G PT +++ + GY K NN + + MKE
Sbjct: 422 GDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKE 471
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 146/339 (43%), Gaps = 27/339 (7%)
Query: 120 LESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNG 177
+E A FN +D L Y +L+ R+GL+ +L +M +M E G YN
Sbjct: 270 VERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNI 329
Query: 178 IMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS 237
++ G V+ D G PD F++ I+ Y R +L S +++ M
Sbjct: 330 VINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYG 389
Query: 238 HISMDWGTYSTVANYYIIAGLKEKAI------IYLKKCEDIVSKSKDALGYNHLISHYAS 291
I+ D TY++V N AG K K + + LK C +A+ YN LI ++
Sbjct: 390 -IAPDAITYNSVLNGLCKAG-KAKEVNETFEEMILKGCR------PNAITYNILIENFCK 441
Query: 292 LGNKDEMMKFWGLQKIKCKKQLNRDYI---TMLGSLVKIGELEEAEKMLEEWELSCYCYD 348
+ +E G+ + L D I T++ + G+L+ A + ++ + Y
Sbjct: 442 INQLEEAS---GVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSAT 498
Query: 349 FRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMK 408
NI++ YS K ++ A+ + E++ KG P ++ ++ G N+++A+ +
Sbjct: 499 ADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLA 558
Query: 409 EALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFV 447
E ++ K + P + +L+ L N V E A +
Sbjct: 559 EMVS-----KGFVPSMATFGRVLNSLAMNHRVSEAVAII 592
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 53/268 (19%), Positives = 110/268 (41%), Gaps = 10/268 (3%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+ ++ V E+ +++M G YN I+ Y ++ ++L D
Sbjct: 187 YNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAI 246
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G PD +Y IN A ++ + E +++ + D Y++ ++ GL
Sbjct: 247 FKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKD-LKPDLVVYNS-----LVKGLC 300
Query: 260 EKAIIY--LKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR 315
+ +I L+ ++V D YN +I+ +GN + +K
Sbjct: 301 RQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVF 360
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
+ TM+ K +L+ A +++E + D N +L G + G ++ + +E+
Sbjct: 361 TFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEM 420
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKA 403
+ KG P +++I+ + N +E+A
Sbjct: 421 ILKGCRPNAITYNILIENFCKINQLEEA 448
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 69/347 (19%), Positives = 138/347 (39%), Gaps = 55/347 (15%)
Query: 151 GLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSY 210
G ++E+++L++ M + + YN +M + ++ L M G PD+F+Y
Sbjct: 164 GRLEEAVALVESMDAYIA-PDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTY 222
Query: 211 RICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCE 270
I+ Y R L +L++ + + D TY ++ N G E+A+ +
Sbjct: 223 NTIIDGYCKRDMLQEATELLKDAIFKGFVP-DRVTYCSLINGLCAEGDVERALELFNE-- 279
Query: 271 DIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGEL 330
+++KD K +++ + L K C++ L +L +L + E+
Sbjct: 280 ---AQAKDL---------------KPDLVVYNSLVKGLCRQGL------ILHALQVMNEM 315
Query: 331 EEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSII 390
E + W NI++ G + G I A V+ + + KG P +++ +
Sbjct: 316 VEDGCHPDIWTY----------NIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTM 365
Query: 391 AAGYADKNNMEKAFECMKEALAVHEENKFW----RPKPSLVSSILDWLGDNRDVEEVEAF 446
GY + ++ A + ++ + W P +S+L+ L +EV
Sbjct: 366 IDGYCKRLKLDSALQLVE---------RMWMYGIAPDAITYNSVLNGLCKAGKAKEVNET 416
Query: 447 VSSLKIKVQKRN--MYHALTEAHIRSGQ--EVDGLLESMKADDIDED 489
+ +K + N Y+ L E + Q E G++ M D + D
Sbjct: 417 FEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPD 463
>gi|224068454|ref|XP_002326124.1| predicted protein [Populus trichocarpa]
gi|222833317|gb|EEE71794.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 131/310 (42%), Gaps = 34/310 (10%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+Y LL+ V++ V E++ L ++ M S +N ++ G ++ +V DM
Sbjct: 145 VYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGVDRAFEVFKDM 204
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG- 257
+ G PD +Y IN +E+ + +E++S+S S D TY+++ + + +G
Sbjct: 205 ESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGK 264
Query: 258 LKEKAIIY---------------------------LKKCEDIVSK------SKDALGYNH 284
+KE + ++ + + E + K S D + +
Sbjct: 265 MKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTS 324
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSC 344
LI Y G + +KFW + K + Y ++ +L K L EA L + + S
Sbjct: 325 LIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSS 384
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
+ N ++ G+ + G +++ + +LKE+ +K P +++I+ G+ K M +A
Sbjct: 385 IIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKGRMFEAI 444
Query: 405 ECMKEALAVH 414
LA
Sbjct: 445 NIFNRMLATR 454
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 66/352 (18%), Positives = 143/352 (40%), Gaps = 39/352 (11%)
Query: 175 YNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEME 234
YN +M G H+ + V M +G PD+ + S+ ++ +L E++
Sbjct: 76 YNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAEVQ 135
Query: 235 SQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGN 294
+ + ++ Y+ + + + +A IYL K ++ D +N LI +G
Sbjct: 136 GK-EVRINSFVYNNLLSVLVKQNQVHEA-IYLFKEYLVMQSPPDTWTFNILIRGLCRVGG 193
Query: 295 KDEMMK-FWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCY-DFRVP 352
D + F ++ C + Y T++ L K E++ ++ +E + C D
Sbjct: 194 VDRAFEVFKDMESFGCLPDV-VTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTY 252
Query: 353 NIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA--------- 403
I+ G+ + G +++A + +E+++ G P +++++ G+ N+ +A
Sbjct: 253 TSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAY 312
Query: 404 FECMKEALA-------------VHEENKFWR--------PKPSLVSSILDWLGDNRDVEE 442
F+C + + V+ KFW P + +++ L + E
Sbjct: 313 FDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNE 372
Query: 443 VEAFVSSLKIK--VQKRNMYHALTEAHIRSGQEVDG--LLESMKADDIDEDK 490
F+ +K + K MY+ + + ++G +G +L+ M+ D DK
Sbjct: 373 ARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDK 424
>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 864
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/387 (20%), Positives = 160/387 (41%), Gaps = 37/387 (9%)
Query: 58 DQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKV 117
DQ +G + S +I+ L R A + + M +G +VH + V +D + +
Sbjct: 290 DQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRD 349
Query: 118 RGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNY 175
+E A + + + Y AL+N Y ++G V + L+ M++ + +
Sbjct: 350 GKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTF 409
Query: 176 NGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMES 235
N +M G+ K +L M +NG+ PD SY + I+ ++ +L M S
Sbjct: 410 NELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNS 469
Query: 236 QSHISMDWGTYSTVANYYIIAGLKEKAIIYLK-------KCEDI-----------VSKSK 277
+ D T++ + N + G + A +L +++ V K++
Sbjct: 470 -FDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTR 528
Query: 278 DALGYNHLISHYASLGNKDEMMKFWGLQKIKCK--------KQLNR--------DYITML 321
DAL + L + + CK ++N+ Y T++
Sbjct: 529 DALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLV 588
Query: 322 GSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKT 381
L++ G++ + +MLE +LS + II+ G Q G +E+A+ +L + G +
Sbjct: 589 DGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVS 648
Query: 382 PTPNSWSIIAAGYADKNNMEKAFECMK 408
P +++++ GY + +++A E ++
Sbjct: 649 PNHVTYTVMVKGYVNNGKLDRALETVR 675
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/368 (19%), Positives = 150/368 (40%), Gaps = 36/368 (9%)
Query: 47 GDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHD 106
G DV+ + L + +G + E+ +I + + + + AL + E + + + H
Sbjct: 490 GKADVA-SAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHS 548
Query: 107 HAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMK 164
V LD++ K L+ +N V + Y L++ +R G + S +++ MK
Sbjct: 549 LNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMK 608
Query: 165 EMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELS 224
G + Y I+ G+ E+ +L M+++GV P++ +Y + + Y +L
Sbjct: 609 LSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLD 668
Query: 225 SMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNH 284
++ M + + ++ YS++ ++ L +K I + D
Sbjct: 669 RALETVRAMVERGY-ELNDRIYSSLLRGFV---LSQKGI-----------RETDPECIKE 713
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSC 344
LIS LG + + + ++ CK+ + ++ +++K G E
Sbjct: 714 LISVVEQLGGSTSGLCIFLVTRL-CKEGRTDESNGLVQTILKSGVFLE------------ 760
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
+ +II+ Y K K ++ ++K G P+ S+ ++ G + + E+A
Sbjct: 761 -----KAIDIIMESYCSKKKHTKCVELITLVLKSGFVPSFKSFCLVIQGLKKEGDTERAR 815
Query: 405 ECMKEALA 412
E + E L
Sbjct: 816 ELVMELLT 823
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 125/277 (45%), Gaps = 12/277 (4%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +++ Y G + ++L LM M+ G + YN I+ L G+ + VL +M
Sbjct: 296 YSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMM 355
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ PDN Y I+ + + + EM S+ IS D+ TY+T+ + G
Sbjct: 356 SQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKK-ISPDYITYTTLIQGF---GQG 411
Query: 260 EKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
K I +++S+ D + Y LI Y G EM+ + L + + +
Sbjct: 412 GKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAG---EMVNAFSLHNEMVQMGMTPNI 468
Query: 318 IT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
+T ++ L K GEL+ A ++L+E + + N ++ G + G IE+A ++KE
Sbjct: 469 VTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKE 528
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
+ G P +++ + Y +++KA + ++E L
Sbjct: 529 MEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEML 565
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/312 (19%), Positives = 122/312 (39%), Gaps = 63/312 (20%)
Query: 101 AFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLM 160
AFS+H+ VQ+ + + YGAL++ + G +D + L+
Sbjct: 452 AFSLHNEMVQMGMTPNIVT--------------------YGALIDGLCKHGELDTANELL 491
Query: 161 QKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGAR 220
+M++ G + YN ++ G E+ ++ +M+ G+ PD +Y I++Y
Sbjct: 492 DEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRL 551
Query: 221 SELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDAL 280
++ +LQEM +D G TV
Sbjct: 552 GDIDKAHKLLQEM-------LDRGLQPTVVT----------------------------- 575
Query: 281 GYNHLISHYASLG---NKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKML 337
+N L++ + LG + D ++ W L+K + Y T++ + K+
Sbjct: 576 -FNVLMNGFCMLGMLEDGDRLLG-WMLEKGIVPDAIT--YNTLMKQHCIRNSMNTTTKIY 631
Query: 338 EEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADK 397
+ D NI++ G+ + +++A + KE+++KG PT S++ + + K
Sbjct: 632 KRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKK 691
Query: 398 NNMEKAFECMKE 409
+A E +E
Sbjct: 692 RKFXEARELFEE 703
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 84/195 (43%), Gaps = 9/195 (4%)
Query: 208 FSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYII-------AGLKE 260
SY + + + LS + N + +E + ++G +Y II +KE
Sbjct: 217 LSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKE 276
Query: 261 KAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITM 320
+ ++ D S + D + Y+ +I Y LG + +K +IK K Y ++
Sbjct: 277 AHRLLMQM--DFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSI 334
Query: 321 LGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGK 380
+ L KIG+ EAEK+L E D V ++ G+ + G + A+ E++ K
Sbjct: 335 ILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKI 394
Query: 381 TPTPNSWSIIAAGYA 395
+P +++ + G+
Sbjct: 395 SPDYITYTTLIQGFG 409
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 63/333 (18%), Positives = 130/333 (39%), Gaps = 54/333 (16%)
Query: 165 EMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELS 224
E G + +YN I+ G+ ++ +L+ M PD SY I+ Y EL
Sbjct: 251 EYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELK 310
Query: 225 SMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNH 284
++ +M+ I GLK + YN
Sbjct: 311 KALKLMDDMQ--------------------IKGLK-----------------PNRYTYNS 333
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQL--NRDYITMLGSLVKIGELEEAEKMLEEWEL 342
+I +G E K L+++ +K + N Y T++ K+G + A K +E
Sbjct: 334 IILLLCKIGKSFEAEKV--LREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLS 391
Query: 343 SCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEK 402
D+ ++ G+ Q G + + + E++ +G P +++ + Y M
Sbjct: 392 KKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVN 451
Query: 403 AFECMKEALAVHEENKFWRPKPSLVS--SILDWLGDNRDVEEVEAFVSSLKIKVQKRN-- 458
AF ++H E P++V+ +++D L + +++ + ++ K + N
Sbjct: 452 AF-------SLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVC 504
Query: 459 MYHALTEAHIRSG--QEVDGLLESMKADDIDED 489
+Y+++ ++G ++ L++ M+ ID D
Sbjct: 505 IYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPD 537
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 98/442 (22%), Positives = 166/442 (37%), Gaps = 64/442 (14%)
Query: 48 DPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHD- 106
+PDV L + +G ++ E Q+V+ + R + + S + G V D
Sbjct: 214 EPDVVTFTALMDGLCKGDRLQEA--QQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDA 271
Query: 107 HAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEM 166
V +I VRG+E +NSL ++G + VD +L LM++M
Sbjct: 272 QEVFKRMI--VRGIEPNVVTYNSL--------IHG-----FCMTNGVDSALLLMEEMTAT 316
Query: 167 GSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSM 226
G + YN ++ TG+ + + DMK PD +Y I + +
Sbjct: 317 GCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMA 376
Query: 227 ENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK--SKDALGYNH 284
+ +M Q+ + D T+ST+ Y AGL + A L E++V+ S D Y
Sbjct: 377 RTLFDDMLKQAVLP-DVVTFSTLVEGYCNAGLVDDAERLL---EEMVASDCSPDVYTYTS 432
Query: 285 LISHYASLGNKDE----------------MMKFWGLQKIKCKK----------------- 311
L+ + +G E ++ + L C+
Sbjct: 433 LVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNG 492
Query: 312 -QLNR-DYITMLGSLVKIGELEEAEKMLEEWELSCYC-YDFRVPNIILLGYSQKGMIEKA 368
Q N Y +++G G+LEEA KMLE E C D +++ G + G + A
Sbjct: 493 VQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAA 552
Query: 369 DAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVS 428
+L+ I + G P + + + G + KA E ++E + RP
Sbjct: 553 LELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKS----RPNAEAYE 608
Query: 429 SILDWLGDNRDVEEVEAFVSSL 450
+++ L EE A L
Sbjct: 609 AVIQELAREGRHEEANALADEL 630
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 138/319 (43%), Gaps = 26/319 (8%)
Query: 108 AVQLDLIGKVRGLESAETYFNSLNDEDKVDK--LYGALLNCYVREGLVDESLSLMQKMKE 165
+ +D + K L A TYF + + V Y L+N + + V + L+++MKE
Sbjct: 11 TIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKE 70
Query: 166 MGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSS 225
G + + Y+ ++ + + + + M ENG P+ +Y ++ +
Sbjct: 71 SGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDE 130
Query: 226 MENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAII--YLKKCEDIVSK--SKDALG 281
+L EM + + D +Y T ++AGL + I LK ED + D +
Sbjct: 131 AYELLDEMRERG-LQPDKFSYDT-----LMAGLCKTGKIDMALKVFEDNSNGDCPPDVVA 184
Query: 282 YNHLISHYASLGNKDEMMK-FWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEW 340
Y+ LI+ G DE K F +++ C+ + + ++ L K L+EA+++LE
Sbjct: 185 YSTLIAGLCKTGRLDEACKLFEKMRENSCEPDV-VTFTALMDGLCKGDRLQEAQQVLETM 243
Query: 341 E-LSCYCYDFRVPNII-----LLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGY 394
E +C PN+I + G + G + A V K ++ +G P +++ + G+
Sbjct: 244 EDRNC------TPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGF 297
Query: 395 ADKNNMEKAFECMKEALAV 413
N ++ A M+E A
Sbjct: 298 CMTNGVDSALLLMEEMTAT 316
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/274 (19%), Positives = 118/274 (43%), Gaps = 12/274 (4%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+ + G +DE+ L +KM+E + + +M + ++ VL M+
Sbjct: 185 YSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETME 244
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ P+ +Y I+ ++ + V + M + I + TY+++ + + +
Sbjct: 245 DRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRG-IEPNVVTYNSLIHGFCMTNGV 303
Query: 260 EKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
+ A++ + E++ + D + YN LI G E + +G K K N D
Sbjct: 304 DSALLLM---EEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMK---AKFCNPDV 357
Query: 318 IT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
IT ++G K+ ++ A + ++ D + ++ GY G+++ A+ +L+E
Sbjct: 358 ITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEE 417
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMK 408
+V +P +++ + G+ M +A +K
Sbjct: 418 MVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLK 451
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 134/279 (48%), Gaps = 12/279 (4%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
YG+L++ +EG ++E+ L KM E+G +A+ YN ++ Y N G E+ +M
Sbjct: 322 YGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMV 381
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ G+ P +Y + +++ + +++++EM + I D TY+ + N Y G
Sbjct: 382 KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIP-DAITYNILINGYSRCGNA 440
Query: 260 EKAIIYLKKCEDIVSKSKDA--LGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
+KA +++SK + + Y LI L ++ M + L + + ++ D
Sbjct: 441 KKA---FDLHNEMLSKGIEPTHVTYTSLI---YVLSRRNRMKEADDLFEKILDQGVSPDV 494
Query: 318 I---TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
I M+ G +E A +L+E + D N ++ G ++G +E+A +L E
Sbjct: 495 IMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDE 554
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAV 413
+ ++G P S++ + +GY + +++ AF E L++
Sbjct: 555 MKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSI 593
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 88/424 (20%), Positives = 173/424 (40%), Gaps = 51/424 (12%)
Query: 72 LQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLN 131
L RV +LR R A + M +G+ + L L K+ +E A + +
Sbjct: 185 LVRVCCELR---RADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMF 241
Query: 132 DEDKVDKLY--GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHE 189
+Y ++N +EG + ++ + M+ +G + ++YN I+ Y++ G E
Sbjct: 242 RLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIE 301
Query: 190 KIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTV 249
+L M+ G+ PD+++Y I+ L + +M + + TY+T+
Sbjct: 302 GARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVP-NAVTYNTL 360
Query: 250 ANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
+ Y G E+A Y +DEM+K + +
Sbjct: 361 IDGYCNKGDLERAFSY-----------------------------RDEMVKKGIMPSVS- 390
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKAD 369
Y ++ +L G + EA+ M++E D NI++ GYS+ G +KA
Sbjct: 391 ------TYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAF 444
Query: 370 AVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSS 429
+ E++ KG PT +++ + + +N M++A + ++ L ++ P + ++
Sbjct: 445 DLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKIL-----DQGVSPDVIMFNA 499
Query: 430 ILDWLGDNRDVEEVEAFVSSLKIKVQKRN--MYHALTEAHIRSG--QEVDGLLESMKADD 485
++D N +VE + + K + ++ L + R G +E LL+ MK
Sbjct: 500 MVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRG 559
Query: 486 IDED 489
I D
Sbjct: 560 IKPD 563
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
++ A+++ + G V+ + L+++M + +N +M G+ E+ +L +M
Sbjct: 496 MFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEM 555
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMES 235
K G+ PD+ SY I+ YG R ++ V EM S
Sbjct: 556 KRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLS 592
>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
Length = 638
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 132/324 (40%), Gaps = 46/324 (14%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE----DKVDKLYGAL 143
AL + E M Q V + + +GK ++ A +F + E D V + +
Sbjct: 284 ALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTV--VMNNM 341
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM-CLYTNTGQHEKIPDVLLDMKENG 202
+N + G +D+++ L Q+M + S + YN I+ L+ + + ++P MKE+G
Sbjct: 342 INFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESG 401
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
+ P +F+Y I I+ + + + +L+EM+ +
Sbjct: 402 ISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKG------------------------- 436
Query: 263 IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLG 322
C DALG D + + K C R Y M+
Sbjct: 437 ---FPPCPAAYCSLIDALG---------KAKRYDLACELFQELKENCGSSSARVYAVMIK 484
Query: 323 SLVKIGELEEAEKMLEEW-ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKT 381
L K G L++A M +E +L C D N ++ G ++ GM+++A + ++ + + G
Sbjct: 485 HLGKAGRLDDAINMFDEMNKLGC-APDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCI 543
Query: 382 PTPNSWSIIAAGYADKNNMEKAFE 405
P NS++II G A +A E
Sbjct: 544 PDINSYNIILNGLAKTGGPHRAME 567
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 87/179 (48%), Gaps = 7/179 (3%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I L KR+ A ++ + + + S +AV + +GK L+ A F+ +N
Sbjct: 447 LIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLG 506
Query: 135 KVDKLYG--ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+Y AL++ R G++DE+LS M++M+E G +YN I+ TG +
Sbjct: 507 CAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAM 566
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWG--TYSTV 249
++L +MK++ V PD SY + GA S E + ME + + ++ TYS++
Sbjct: 567 EMLSNMKQSTVRPDVVSYNTVL---GALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSI 622
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 107/284 (37%), Gaps = 40/284 (14%)
Query: 111 LDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNC-YVREGLVDESLSLMQKMKEMG 167
++ +GK L+ A F + + + Y ++ + + E S ++MKE G
Sbjct: 342 INFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESG 401
Query: 168 SFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSME 227
S+ Y+ ++ + T + EK +L +M E G PP +Y I++ G
Sbjct: 402 ISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLAC 461
Query: 228 NVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLIS 287
+ QE++ S Y+ + + AG + AI + + + D YN L+S
Sbjct: 462 ELFQELKENCG-SSSARVYAVMIKHLGKAGRLDDAINMFDEMNKL-GCAPDVYAYNALMS 519
Query: 288 HYASLGNKDEMMK-FWGLQKIKCKKQLNR------------------------------- 315
A G DE + +Q+ C +N
Sbjct: 520 GLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRP 579
Query: 316 ---DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIIL 356
Y T+LG+L G EEA K++EE + YD + IL
Sbjct: 580 DVVSYNTVLGALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSIL 623
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 55/278 (19%), Positives = 112/278 (40%), Gaps = 49/278 (17%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y AL++ + + G D + L+ +MKE G + Y ++ L+ + +M+
Sbjct: 233 YSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMR 292
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
PD F+Y I G + + EM+ +
Sbjct: 293 HQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREG---------------------- 330
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMK-FWGLQKIKCKKQLNRDYI 318
C D + N++I+ G D+ MK F + ++C + Y
Sbjct: 331 ---------CR------PDTVVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVV-TYN 374
Query: 319 TMLGSLV----KIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
T++ +L + E+ + ++E +S + + +I++ G+ + +EKA +L+E
Sbjct: 375 TIIKALFESKSRASEVPSWFERMKESGISPSSFTY---SILIDGFCKTNRMEKAMMLLEE 431
Query: 375 IVKKGKTPTPNSWS--IIAAGYADKNNME-KAFECMKE 409
+ +KG P P ++ I A G A + ++ + F+ +KE
Sbjct: 432 MDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKE 469
>gi|254939549|ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays]
gi|218684531|gb|ACL01094.1| chloroplast pentatricopeptide repeat protein 10 [Zea mays]
gi|223948163|gb|ACN28165.1| unknown [Zea mays]
gi|413943497|gb|AFW76146.1| pentatricopeptide repeat10 [Zea mays]
Length = 786
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 92/434 (21%), Positives = 180/434 (41%), Gaps = 64/434 (14%)
Query: 52 SLTPVLDQWVLE-GQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQ 110
++ +LD+ L G ++ V+ L R++ AL++ + QG+A ++ + V
Sbjct: 156 AVCALLDETPLPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVV 215
Query: 111 LDLIGKVRGLESAETYFNSLNDEDKVDKL------YGALLNCYVREGLVDESLSLMQKMK 164
LD+ G+ + + +L DE + + ++ R+GLVDE+++ + +K
Sbjct: 216 LDVYGR---MGRSWPRIVALLDEMRAAGVEPDGFTASTVIAACCRDGLVDEAVAFFEDLK 272
Query: 165 EMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELS 224
G + YN ++ ++ G + + VL +M++NG PD
Sbjct: 273 ARGHAPCVVTYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAV---------------- 316
Query: 225 SMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS---KDALG 281
TY+ +A Y AG E+A +C D ++ +A
Sbjct: 317 --------------------TYNELAGTYARAGFFEEA----ARCLDTMASKGLLPNAFT 352
Query: 282 YNHLISHYASLGNKDEMMKFWG-LQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEW 340
YN +++ Y ++G DE + + ++K +N Y +LG L K +ML E
Sbjct: 353 YNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVN-TYNLVLGMLGKKSRFTVMLEMLGEM 411
Query: 341 ELSCYCYDFRVP-NIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNN 399
S C RV N +L ++GM + VL+ + G + ++++ + A Y +
Sbjct: 412 SRSG-CTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGS 470
Query: 400 MEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRN- 458
AF+ E + + P + +++L+ L D ++ VS ++ K K N
Sbjct: 471 RTNAFKMYNEMTSAG-----FTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNE 525
Query: 459 -MYHALTEAHIRSG 471
Y L + + + G
Sbjct: 526 QSYSLLLQCYAKGG 539
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 118/279 (42%), Gaps = 18/279 (6%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L Y R G +E+ + M G +A YN +M Y N G+ ++ + MK
Sbjct: 318 YNELAGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTAYGNVGKVDEALALFDQMK 377
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHIS---MDWGTYSTVANYYIIA 256
+ G P+ +Y + + G +S + M +L EM S+S + + W T V +
Sbjct: 378 KTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEM-SRSGCTPNRVTWNTMLAVCGKRGME 436
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
+ + ++ C V S+D YN LI+ Y G++ K +
Sbjct: 437 DYVTRVLEGMRSCG--VELSRDT--YNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITT 492
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y +L L + G+ A+ ++ + + + + +++L Y++ G + A+ E+
Sbjct: 493 YNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVY 552
Query: 377 KKGKT-PTPNSW----SIIAAGYADK--NNMEKAFECMK 408
G P SW +++ A + + + ME AF+ +K
Sbjct: 553 GSGAVFP---SWVILRTLVIANFKCRRLDGMETAFQEVK 588
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 144/344 (41%), Gaps = 20/344 (5%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETY----FNSL 130
V+ L + RF L++ MS G + L + GK RG+E T S
Sbjct: 391 VLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGK-RGMEDYVTRVLEGMRSC 449
Query: 131 NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEK 190
E D Y L+ Y R G + + +M G YN ++ + + G
Sbjct: 450 GVELSRDT-YNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWST 508
Query: 191 IPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVA 250
++ M+ G P+ SY + + Y ++ + + E+ + W T+
Sbjct: 509 AQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTL- 567
Query: 251 NYYIIAGLKEKAIIYLKKC-EDIVSK--SKDALGYNHLISHYASLGNKDEMMKFWGLQKI 307
+IA K + + ++ +++ ++ + D + +N ++S YA G + + + I
Sbjct: 568 ---VIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVF--DSI 622
Query: 308 KCKKQLNRDYIT---MLGSLVKIGELEEAEKMLEEWELS-CYCYDFRVPNIILLGYSQKG 363
K + L+ D IT ++ K E EAEK+L + + S D N ++ G+ ++G
Sbjct: 623 K-RSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQG 681
Query: 364 MIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECM 407
++++A VL E+V G P ++ + GY+ +A E +
Sbjct: 682 LVKEAQRVLSEMVADGMAPCAVTYHTLVGGYSSLEMFSEAREVI 725
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 73/161 (45%), Gaps = 4/161 (2%)
Query: 85 FKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSL--NDEDKVDKL-YG 141
+ A +V + + GL+ + + +D+ K AE N L + K D + Y
Sbjct: 612 YSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSYN 671
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
++N + ++GLV E+ ++ +M G A+ Y+ ++ Y++ + +V+ M ++
Sbjct: 672 TVINGFCKQGLVKEAQRVLSEMVADGMAPCAVTYHTLVGGYSSLEMFSEAREVIGYMVQH 731
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMD 242
G+ P +YR + SY L E+ S++ + D
Sbjct: 732 GLKPMELTYRRVVESYCRAKRFEEARGFLSEV-SETDLDFD 771
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 91/427 (21%), Positives = 193/427 (45%), Gaps = 34/427 (7%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I K+ + A+++ E M +G ++ + V +D + K+ + +A+ + +
Sbjct: 185 LIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGG 244
Query: 135 KVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+ + +L++ + + G VD++ L+ M G + + Y+ ++ + + +
Sbjct: 245 FAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAK 304
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
+VL +MK GV PD F+Y I+ ++ E +L+ M + S + D YS++ +
Sbjct: 305 EVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRM-AGSGCTPDVVVYSSIIHA 363
Query: 253 YIIAGL---KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
+ +G +K + ++K KS D + YN +I LG E L++++
Sbjct: 364 FCKSGKLLEAQKTLQEMRK----QRKSPDVVTYNTVIDGLCKLGKIAEAQVI--LEQMQE 417
Query: 310 KKQLNRD---YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIE 366
+ D Y T++ L K L EA+K+L+ + D I+ G + G +E
Sbjct: 418 SGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLE 477
Query: 367 KADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSL 426
+A+ +L+ + + G P +++ + +G ++ EA V EE + P+L
Sbjct: 478 EAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVD-------EAERVMEEMRNAGCPPNL 530
Query: 427 VS--SILDWLGDNRDVEEVEAFVSSLK--------IKVQKRNMYHALTEAHIRSGQEVDG 476
V+ ++++ L + ++E + V +K R + +AL + + QE +
Sbjct: 531 VTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLV--QEAEQ 588
Query: 477 LLESMKA 483
LLE MK+
Sbjct: 589 LLEQMKS 595
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 93/438 (21%), Positives = 185/438 (42%), Gaps = 54/438 (12%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCY 147
AL++ E M G A H + + L+ A + S+ + V Y AL+ +
Sbjct: 131 ALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNV-VTYTALIAAF 189
Query: 148 VREGLVDESLSLMQKMKEMGSFGSALNYNGI---MCLYTNTGQHEKI----------PDV 194
R ++E++ L+++M+E G + + YN + +C + G + + P+V
Sbjct: 190 ARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNV 249
Query: 195 -----LLD-----------------MKENGVPPDNFSYRICINSYGARSELSSMENVLQE 232
L+D M G+ P+ +Y I+ + + VL+E
Sbjct: 250 MTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEE 309
Query: 233 MESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASL 292
M+++ ++ D TYS + + A E+A L++ + D + Y+ +I +
Sbjct: 310 MKTRG-VTPDAFTYSALIHGLCKADKIEEAEQMLRRMAG-SGCTPDVVVYSSIIHAFCKS 367
Query: 293 GNKDEMMKFWGLQKIKCKKQLNRD---YITMLGSLVKIGELEEAEKMLEEWELSC-YCYD 348
G E K LQ+++ K++ + D Y T++ L K+G++ EA+ +LE+ + S D
Sbjct: 368 GKLLEAQKT--LQEMR-KQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPD 424
Query: 349 FRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMK 408
+ ++ G + M+ +A +L + K G P +++ I G +E+A
Sbjct: 425 VVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA----- 479
Query: 409 EALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNM--YHALTEA 466
E L + P ++++ L R V+E E + ++ N+ Y+ +
Sbjct: 480 EYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNG 539
Query: 467 HIRSGQ--EVDGLLESMK 482
SG+ E L++ MK
Sbjct: 540 LCVSGRIKEAQQLVQRMK 557
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/320 (20%), Positives = 131/320 (40%), Gaps = 26/320 (8%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +++ + G + +L L+++MK G A + I+ N G + D L M
Sbjct: 115 YNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM- 173
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G P+ +Y I ++ +L +L+EM + G + Y ++
Sbjct: 174 --GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRER-------GCPPNLVTYNVLVDAL 224
Query: 260 EKAIIYLKKCEDIVSK------SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQL 313
K + + +D+V K + + + +N L+ + GN D+ K G+ K +
Sbjct: 225 CK-LSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPN 283
Query: 314 NRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
Y ++ L K + EA+++LEE + D + ++ G + IE+A+ +L+
Sbjct: 284 VVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLR 343
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVS--SIL 431
+ G TP +S I + + EA +E + R P +V+ +++
Sbjct: 344 RMAGSGCTPDVVVYSSIIHAFCKSGK-------LLEAQKTLQEMRKQRKSPDVVTYNTVI 396
Query: 432 DWLGDNRDVEEVEAFVSSLK 451
D L + E + + ++
Sbjct: 397 DGLCKLGKIAEAQVILEQMQ 416
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/315 (19%), Positives = 138/315 (43%), Gaps = 18/315 (5%)
Query: 171 SALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVL 230
+A ++N ++ + +H + D+ PD SY I I+ + +L + +L
Sbjct: 76 TAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELL 135
Query: 231 QEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYA 290
+EM+S + + D T++ + AG + A+ +L+ + + + Y LI+ +A
Sbjct: 136 EEMKS-AGFAPDAFTHTPIITAMANAGDLDGAMDHLRS----MGCDPNVVTYTALIAAFA 190
Query: 291 SLGNKDEMMKFW-GLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDF 349
+E MK +++ C L Y ++ +L K+ + A+ ++++ + +
Sbjct: 191 RAKKLEEAMKLLEEMRERGCPPNL-VTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNV 249
Query: 350 RVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
N ++ G+ ++G ++ A +L +V KG P ++S + G +A E ++E
Sbjct: 250 MTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEE 309
Query: 410 ALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRN--MYHALTEAH 467
+ + P S+++ L +EE E + + + +Y ++ A
Sbjct: 310 M-----KTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAF 364
Query: 468 IRSGQEVDGLLESMK 482
+SG+ LLE+ K
Sbjct: 365 CKSGK----LLEAQK 375
>gi|242060656|ref|XP_002451617.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
gi|241931448|gb|EES04593.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
Length = 593
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/371 (19%), Positives = 151/371 (40%), Gaps = 49/371 (13%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLN 145
A++V + M + + + + +++ GK + S+ FN + + Y AL+N
Sbjct: 254 AVEVYQRMKKERCRTNTETYTLMINVYGKAKQPMSSLKVFNEMKTIGCKPNICTYTALVN 313
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
+ REGL +++ + ++M++ G YN +M Y+ G + ++ M+ G P
Sbjct: 314 AFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEP 373
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
D SY I +++YG E QE++ Q G T+ ++ ++ K+
Sbjct: 374 DRASYNILVDAYGRAGLHQEAEAAFQELKQQ-------GMRPTMKSHMLLLSAHAKS-GN 425
Query: 266 LKKCEDIVSK------SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
+ +CE+++++ D N +++ Y G D+M +
Sbjct: 426 VARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMER------------------- 466
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
+LG++ E+ ++ D N+++ Y + G +++ +A + + +G
Sbjct: 467 LLGAM---------ERGGDDDAGGGAAPDTSTYNVLVNVYGRAGYLDRMEAAFRALAARG 517
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRD 439
+W+ YA K + E +E + + P +L D R
Sbjct: 518 LAADVVTWTSRIGAYARKKEYGRCLEIFEEMV-----DAGCYPDAGTAKVLLAACSDERQ 572
Query: 440 VEEVEAFVSSL 450
VE+V A V S+
Sbjct: 573 VEQVTAIVRSM 583
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 163/381 (42%), Gaps = 47/381 (12%)
Query: 75 VIRQLRSRKRFKHALQVSEW-MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE 133
V QLR ++++ + V EW + + + + +D G+ R L AE+ + +L +
Sbjct: 135 VAVQLRLNRQWEPIITVCEWILYRSSFRPDIICYNLLIDAYGQKRQLNKAESIYMALLEA 194
Query: 134 DKV--DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
V + Y LL Y G + + ++ +M++ G +A YN + EK
Sbjct: 195 HCVPTEDTYALLLRAYCNSGQLHRAEGVISEMQKNGLPPTATVYNAYLDGLLKARCSEKA 254
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYG-ARSELSSMENVLQEMESQSHISMDWGTYSTVA 250
+V MK+ + +Y + IN YG A+ +SS++ V EM++ + TY+ +
Sbjct: 255 VEVYQRMKKERCRTNTETYTLMINVYGKAKQPMSSLK-VFNEMKTIG-CKPNICTYTALV 312
Query: 251 NYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCK 310
N + GL EKA ++ + D YN L+ Y+ G + + L
Sbjct: 313 NAFAREGLCEKAEEVFEEMQQ-AGHEPDVYAYNALMEAYSRAGLPQGASEIFSLM----- 366
Query: 311 KQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADA 370
E M E + + Y NI++ Y + G+ ++A+A
Sbjct: 367 -----------------------EHMGCEPDRASY-------NILVDAYGRAGLHQEAEA 396
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSI 430
+E+ ++G PT S ++ + +A N+ + E M + +H+ RP ++++
Sbjct: 397 AFQELKQQGMRPTMKSHMLLLSAHAKSGNVARCEEVMAQ---LHKSG--LRPDTFALNAM 451
Query: 431 LDWLGDNRDVEEVEAFVSSLK 451
L+ G ++++E + +++
Sbjct: 452 LNAYGRAGRLDDMERLLGAME 472
>gi|356554513|ref|XP_003545590.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Glycine max]
Length = 632
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 131/284 (46%), Gaps = 35/284 (12%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPD---VL 195
+ AL+N + G ++++ ++QKMKE G SA YN ++ Y G+ PD L
Sbjct: 144 FFNALINAFAESGNMEDAKKVVQKMKESGLKPSACTYNTLIKGYGIAGK----PDESMKL 199
Query: 196 LDM--KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYY 253
LD+ E V P+ +Y + I + +S NV+ +M + S + D T++T+A Y
Sbjct: 200 LDLMSTEGNVKPNLKTYNMLIRALCKMENISEAWNVVYKM-TASGMQPDVVTFNTIATAY 258
Query: 254 IIAGLKEKAIIYLKKCEDIVSKSKDALGYNH-----LISHYASLGNKDEMMKF------W 302
G +A I+ +++L N +IS Y G E ++F
Sbjct: 259 AQNGKTAQAEAM------ILEMQRNSLKPNERTCTIIISGYCREGKVQEALRFVYRMKDL 312
Query: 303 GLQ-KIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQ 361
G+Q + L ++ M+ ++E K++EE+++ D + I+ +SQ
Sbjct: 313 GMQPNLIVLNSLVNGFVDMMDR----DGVDEVLKLMEEFQIR---PDVITYSTIMNAWSQ 365
Query: 362 KGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
G +EK + ++K G P +++SI+A GY MEKA E
Sbjct: 366 AGFLEKCKEIYNNMLKSGVKPDAHAYSILAKGYVRAQEMEKAEE 409
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 106/263 (40%), Gaps = 38/263 (14%)
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
++N ++ G E++ + Q + E G S Y ++ T + I ++ ++E
Sbjct: 78 VMNILIKSGKPQEAIVIFQNLIEGGHQPSLATYTTLLNALTTQKYFKPIHSIVSLVEEKQ 137
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
+ PD+ + IN++ + + V+Q+M+ +GLK A
Sbjct: 138 MKPDSIFFNALINAFAESGNMEDAKKVVQKMKE--------------------SGLKPSA 177
Query: 263 IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN-RDYITML 321
YN LI Y G DE MK L + + N + Y ++
Sbjct: 178 CT-----------------YNTLIKGYGIAGKPDESMKLLDLMSTEGNVKPNLKTYNMLI 220
Query: 322 GSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKT 381
+L K+ + EA ++ + S D N I Y+Q G +A+A++ E+ +
Sbjct: 221 RALCKMENISEAWNVVYKMTASGMQPDVVTFNTIATAYAQNGKTAQAEAMILEMQRNSLK 280
Query: 382 PTPNSWSIIAAGYADKNNMEKAF 404
P + +II +GY + +++A
Sbjct: 281 PNERTCTIIISGYCREGKVQEAL 303
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 123/284 (43%), Gaps = 20/284 (7%)
Query: 30 AVKPVA--RNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELEL-QRVIRQLRSRKRFK 86
+KP A N L G PD S+ +LD EG L+ +IR L +
Sbjct: 172 GLKPSACTYNTLIKGYGIAGKPDESMK-LLDLMSTEGNVKPNLKTYNMLIRALCKMENIS 230
Query: 87 HALQVSEWMSGQGL---AFSVHDHAVQLDLIGKVRGLESA--ETYFNSLNDEDKVDKLYG 141
A V M+ G+ + + A GK E+ E NSL ++ +
Sbjct: 231 EAWNVVYKMTASGMQPDVVTFNTIATAYAQNGKTAQAEAMILEMQRNSLKPNERTCTI-- 288
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
+++ Y REG V E+L + +MK++G + + N ++ + + + + +VL M+E
Sbjct: 289 -IISGYCREGKVQEALRFVYRMKDLGMQPNLIVLNSLVNGFVDMMDRDGVDEVLKLMEEF 347
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
+ PD +Y +N++ L + + M +S + D YS +A Y+ A EK
Sbjct: 348 QIRPDVITYSTIMNAWSQAGFLEKCKEIYNNM-LKSGVKPDAHAYSILAKGYVRAQEMEK 406
Query: 262 AIIYLKKCEDIVSKS---KDALGYNHLISHYASLGNKDEMMKFW 302
A L +++KS + + + +IS + S+G D M+ +
Sbjct: 407 AEEML----TVMTKSGVHPNVVIFTTVISGWCSVGRMDNAMRVF 446
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/341 (20%), Positives = 146/341 (42%), Gaps = 22/341 (6%)
Query: 140 YGALLNCYVREGLVDESLSLM-QKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
Y L+ G +E+L ++ M+ G + + YN ++ + G+ + ++ M
Sbjct: 157 YNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVM 216
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG- 257
+E GV P ++ +N + + EM + ++ D +Y+T+ + Y AG
Sbjct: 217 REGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREG-LTPDGVSYNTLVSGYCKAGC 275
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
L E ++ + + V D + + LI GN + + G + + + +
Sbjct: 276 LHEALAVFAEMAQKGV--VPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTF 333
Query: 318 ITMLGSLVKIGELEEAEKMLEEW-----ELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
++ + G L++A ++E + S CY N+++ GY + G +++A ++
Sbjct: 334 TALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCY-----NVLINGYCKLGRMDEARELI 388
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILD 432
E+ KG P ++S I +GY + + AFE ++ L K P SS++
Sbjct: 389 HEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKML-----KKGVVPDAITYSSLIR 443
Query: 433 WLGDNRDV-EEVEAFVSSLKIKVQKRNM-YHALTEAHIRSG 471
L + R + + E F L++ +Q Y L + H + G
Sbjct: 444 GLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEG 484
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 131/295 (44%), Gaps = 33/295 (11%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ AL++ + R G +D++L M++M+E S + YN ++ Y G+ ++ +++ +M+
Sbjct: 333 FTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEME 392
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G+ PD +Y ++ Y + S + ++M + + D TYS+ +I GL
Sbjct: 393 AKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVP-DAITYSS-----LIRGLC 446
Query: 260 EKAIIYLKKCEDI-----VSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN 314
E+ + CE + D Y LI + GN + K L KK +
Sbjct: 447 EERRLG-DACELFEKMLQLGLQPDEFTYTTLIDGHCKEGN---VQKALSLHDEMIKKGVL 502
Query: 315 RDYIT---MLGSLVKIGELEEAEKML---------------EEWELSCYCYDFRVPNIIL 356
D +T ++ L K +EA+++L E C +F+ +L
Sbjct: 503 PDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALL 562
Query: 357 LGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
G+S KG++ +AD V + ++ + + +S++ G+ N+ KA K+ L
Sbjct: 563 KGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLL 617
>gi|168019209|ref|XP_001762137.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686541|gb|EDQ72929.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 513
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/413 (19%), Positives = 154/413 (37%), Gaps = 73/413 (17%)
Query: 71 ELQRVIRQLRSRKRFKHALQVSEW-MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNS 129
+L + + R +++++ A+ + EW + G V + +D G+ + AE F+
Sbjct: 67 DLMETVAEFRRQRKWRSAIVIYEWILQGSMFKPDVGCFNMLMDAYGRTKQWTEAENTFHL 126
Query: 130 LNDED--KVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQ 187
+ + + L+ Y R G ++ + ++ +MKE + YN + + +G
Sbjct: 127 MKKFQCLPTETSFNVLMAAYSRGGQLERAERVLHEMKESNCSPGLVTYNTYLEVLNKSGS 186
Query: 188 HEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYS 247
+ DV +M+ GVPP ++ + IN YG + E++ Q M ++ TY+
Sbjct: 187 WQLAEDVFREMQNRGVPPAVNTFTLMINIYGKAHHSAKAEHLFQSMR-KALCPPSLFTYT 245
Query: 248 TVANYY-----------IIAGLKEKAII------------YLKKCEDIVSK--------- 275
+ N + I A L+ + Y + +K
Sbjct: 246 ALINAHAREGNCVRAEEIFAELQSVGFVPDIYTYNALLEAYSRGGHPAGAKEVFETMLEA 305
Query: 276 --SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEA 333
D + YN LI + G + + K K + +I +L + VK G + +A
Sbjct: 306 GVKADHVSYNILIDAFGRAGLISDAQAIYDSMKKVGFKPTMKSHILLLSAFVKAGRVTDA 365
Query: 334 EKMLEEWE--------------LSCYCYDFRV----------------PNIILLG----- 358
E + E L Y R+ P+II L
Sbjct: 366 ENFVRRLESMGVEPDTFMFNSLLGAYGNSGRMDKMESLYESMQGSVCKPDIITLNTLINV 425
Query: 359 YSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
Y+Q G IE+A+ + + KG TP SW+ + Y+ + K ++ L
Sbjct: 426 YAQGGYIERAEEIFNSLESKGFTPDVMSWTSLMGAYSKRKLYRKCVSVYQKML 478
>gi|414591641|tpg|DAA42212.1| TPA: hypothetical protein ZEAMMB73_141452 [Zea mays]
Length = 472
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 146/314 (46%), Gaps = 17/314 (5%)
Query: 100 LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED-KVDKLYGA-LLNCYVREGLVDESL 157
L+ + + +A+ +D + E A +F L +VD + + LL + DE+L
Sbjct: 73 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 132
Query: 158 S-LMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV--PPDNFSYRICI 214
L+ + E+G +YN ++ N G+ + ++L M E G PD +Y I
Sbjct: 133 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNTVI 192
Query: 215 NSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVS 274
+ + +++ ++ +EM Q I D TY++V + A +KA +L++ +V+
Sbjct: 193 DGFFKEGDVNKACDLFKEM-VQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQ---MVN 248
Query: 275 KS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITM---LGSLVKIGE 329
K + YN+LI Y+S G E ++ + + + + D +T+ +GSL K G+
Sbjct: 249 KRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMR---RHSILPDVVTLSMLMGSLCKYGK 305
Query: 330 LEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSI 389
++EA + + + D NI+L GY+ KG + + ++ G P ++++
Sbjct: 306 IKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNV 365
Query: 390 IAAGYADKNNMEKA 403
YA+ ++KA
Sbjct: 366 QIKAYANCGMLDKA 379
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 101/267 (37%), Gaps = 39/267 (14%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +++ + +EG V+++ L ++M + G + YN ++ +K L M
Sbjct: 188 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMV 247
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG-L 258
V P+N++Y I Y + + V +EM S I D T S + G +
Sbjct: 248 NKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHS-ILPDVVTLSMLMGSLCKYGKI 306
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
KE ++ + ++ D YN +++ YA+ G +M + L
Sbjct: 307 KEARDVF--DTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDL-------------- 350
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
MLG + DF N+ + Y+ GM++KA + E+
Sbjct: 351 -MLGDGIAP--------------------DFYTFNVQIKAYANCGMLDKAMIIFNEMRDH 389
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAFE 405
G P ++ + A M+ A E
Sbjct: 390 GVKPDVVTYRTVIAALCRIGKMDDAME 416
>gi|357467093|ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492879|gb|AES74082.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 530
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/410 (20%), Positives = 172/410 (41%), Gaps = 57/410 (13%)
Query: 85 FKHALQVSEWMSG-QGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDK--VDKLYG 141
F +L W + +G S + +DL GK+R + A + + +
Sbjct: 123 FLQSLAFFNWATTLEGFPSSPEPYNEMIDLAGKLRHFDLAWHLIDLMKSRGVRITVSTFS 182
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGI---MC---------LYTNTGQHE 189
L+ YVR GL E++ +M++ G ++++ + +C L+ ++ +H+
Sbjct: 183 VLVRRYVRAGLAAEAVHAFNRMEDYGCKPDKVSFSIVISSLCKKRRASEAELFFDSLKHK 242
Query: 190 KIPDVLL----------------------DMKENGVPPDNFSYRICINSYGARSELSSME 227
PDV++ DMKE GV P+ ++Y I I+S +++
Sbjct: 243 FEPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAH 302
Query: 228 NVLQEMESQSHISMDWG------TYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALG 281
+V EM +D G T++++ ++ AG EK + + + + + D +
Sbjct: 303 DVFSEM-------IDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRL-GCAADTIS 354
Query: 282 YNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEW- 340
YN LI + N DE +K K + ++ G + ++ ++ A +M +
Sbjct: 355 YNFLIESHCKDENLDEAVKVLDTMVKKGVAPNASTFNSIFGCIAELHDVNGAHRMYAKMK 414
Query: 341 ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNM 400
EL C NI++ ++ I+ + KE+ + P N++ I+ + +K +
Sbjct: 415 ELKCMPNTLTY-NILMRMFADSKSIDMVLKLKKEMDESEVEPNVNTYRILILMFCEKGHW 473
Query: 401 EKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL 450
A+ MKE + E K +P S+ ++L+ L + +++ E V +
Sbjct: 474 NNAYNLMKEMV----EEKCLKPNLSIYETVLELLRNAGQLKKHEELVEKM 519
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 111/251 (44%), Gaps = 12/251 (4%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +++ R G + + + +M + G +A+ +N +M ++ G+ EK+ V MK
Sbjct: 285 YSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMK 344
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G D SY I S+ L VL M + ++ + T++++ + IA L
Sbjct: 345 RLGCAADTISYNFLIESHCKDENLDEAVKVLDTMVKKG-VAPNASTFNSI--FGCIAELH 401
Query: 260 E---KAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWG-LQKIKCKKQLNR 315
+ +Y K E + + L YN L+ +A + D ++K + + + + +N
Sbjct: 402 DVNGAHRMYAKMKE--LKCMPNTLTYNILMRMFADSKSIDMVLKLKKEMDESEVEPNVN- 458
Query: 316 DYITMLGSLVKIGELEEAEKMLEEW-ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
Y ++ + G A +++E E C + + +L G ++K + ++++
Sbjct: 459 TYRILILMFCEKGHWNNAYNLMKEMVEEKCLKPNLSIYETVLELLRNAGQLKKHEELVEK 518
Query: 375 IVKKG-KTPTP 384
+V +G +P P
Sbjct: 519 MVARGFVSPRP 529
>gi|449463822|ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 641
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 145/315 (46%), Gaps = 9/315 (2%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
++R+ S + K A++V + M G + LD + K ++ A + F +
Sbjct: 183 LMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVRF 242
Query: 135 KVD-KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPD 193
+ + + +LL + REG + E+ ++ ++KE G + YN ++ Y G+ D
Sbjct: 243 NPNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFD 302
Query: 194 VLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYY 253
+L +MK+ P+ S+ I I S+ ++ + EM+ S D TY+T+ + +
Sbjct: 303 LLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQG-SGCEADVVTYTTLISGF 361
Query: 254 IIAGLKEKAIIYLKKCEDIVSKSKDA--LGYNHLISHYASLGNKDEMMKFW-GLQKIKCK 310
G +KA L +D++ K D L Y ++ + +E M+ ++KI C
Sbjct: 362 CKWGNTDKAYEIL---DDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCV 418
Query: 311 KQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADA 370
LN Y TM+ + K+G+L+EA ++ E + +++ G+ +G + +A
Sbjct: 419 PDLN-IYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACD 477
Query: 371 VLKEIVKKGKTPTPN 385
KE+V++G P
Sbjct: 478 YFKEMVERGLLSAPQ 492
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 100/222 (45%), Gaps = 5/222 (2%)
Query: 189 EKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYST 248
+K +VL +M + G PD + + +++ + ++ ++M + + ++ T S
Sbjct: 194 KKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVRFNPNLRHFT-SL 252
Query: 249 VANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGN-KDEMMKFWGLQKI 307
+ + + E + ++ E D + YN+L+ YA G +D ++K+
Sbjct: 253 LYGWCREGKIMEAKHVLVQIKE--AGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKV 310
Query: 308 KCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEK 367
C + ++ S K +++EA ++ E + S D ++ G+ + G +K
Sbjct: 311 NCGPNAA-SFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDK 369
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
A +L ++++KG P+ S+ I + K +E+ E ++E
Sbjct: 370 AYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEE 411
>gi|226507918|ref|NP_001144813.1| uncharacterized protein LOC100277891 [Zea mays]
gi|195647376|gb|ACG43156.1| hypothetical protein [Zea mays]
Length = 597
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/317 (18%), Positives = 124/317 (39%), Gaps = 50/317 (15%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y AL+N + REGL +++ + ++M++ G YN +M Y+ G + ++ M+
Sbjct: 315 YTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLME 374
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G PD SY I ++++G E QE++ Q G T+ ++ ++
Sbjct: 375 HMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQ-------GMRPTMKSHMLLLSAH 427
Query: 260 EKAIIYLKKCEDIVSK------SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQL 313
++ + +CE+++++ D N +++ Y G D+M + +
Sbjct: 428 ARS-GNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLF----------- 475
Query: 314 NRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
+E + S D N+++ Y + G +++ +A +
Sbjct: 476 --------------AAMERGDGA------SAGAPDTSTYNVLVNAYGRAGYLDRMEAAFR 515
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDW 433
+ +G +W+ YA K + +E + + P +L
Sbjct: 516 SLAARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMV-----DAGCYPDAGTAKVLLAA 570
Query: 434 LGDNRDVEEVEAFVSSL 450
D R VE+V A V S+
Sbjct: 571 CSDERQVEQVTAIVRSM 587
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/426 (20%), Positives = 174/426 (40%), Gaps = 53/426 (12%)
Query: 75 VIRQLRSRKRFKHALQVSEW-MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE 133
V QLR ++++ + V EW + + + + +D G+ R L AE + +L +
Sbjct: 142 VAVQLRLNRQWEPIITVCEWVLRRSSFRPDIICYNLLIDAYGQKRQLSEAEAAYMALLEA 201
Query: 134 DKV--DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
V + Y LL Y G + + ++ +M+ G +A YN + EK
Sbjct: 202 RCVPTEDTYALLLRAYCGSGQLHRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKA 261
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
+V MK+ + +Y + IN YG ++ S V +EM+S + TY+ + N
Sbjct: 262 VEVYQRMKKERCRTNTZTYXLMINVYGKANQPMSSLRVFREMKSVG-CKPNICTYTALVN 320
Query: 252 YYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKK 311
+ GL EKA ++ + D YN L+ Y+ G + + L
Sbjct: 321 AFAREGLCEKAEEVFEEMQQ-AGHEPDVYAYNALMEAYSRAGLPQGASEIFSLM------ 373
Query: 312 QLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAV 371
E M E + + Y NI++ + + G+ ++A+A
Sbjct: 374 ----------------------EHMGCEPDRASY-------NILVDAFGRAGLHQEAEAA 404
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSIL 431
+E+ ++G PT S ++ + +A N+ + E M + +H+ RP ++++L
Sbjct: 405 FQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQ---LHKSG--LRPDTFALNAML 459
Query: 432 DWLGDNRDVEEVEAFVSSLK------IKVQKRNMYHALTEAHIRSG--QEVDGLLESMKA 483
+ G ++++E ++++ + Y+ L A+ R+G ++ S+ A
Sbjct: 460 NAYGRAGRLDDMERLFAAMERGDGASAGAPDTSTYNVLVNAYGRAGYLDRMEAAFRSLAA 519
Query: 484 DDIDED 489
+ D
Sbjct: 520 RGLAAD 525
>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 825
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 147/340 (43%), Gaps = 18/340 (5%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I+ L + R A +V MS VH + V LD + KVR + AE + ++
Sbjct: 167 LIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKG 226
Query: 135 KVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGI---MCLYTNTGQHE 189
V + Y AL+ +EG D+ L++KM+ Y + +C + G
Sbjct: 227 VVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGA 286
Query: 190 KIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTV 249
K VL + GV + +Y IN Y ++ + +VLQ M+ ++ ++ T++ V
Sbjct: 287 K---VLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMK-RNRVNPGVQTFNEV 342
Query: 250 ANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
+ + G KA+ +L + S + + +N LIS S+G + ++ L +
Sbjct: 343 IHGFCCGGKVHKAMAFLTQMAG-AGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYG 401
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNII----LLGYSQKGMI 365
+ Y + +L G+LEEA + + + N+I + GY Q G I
Sbjct: 402 VLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMK----GIKAHNVIYTSLVHGYCQVGDI 457
Query: 366 EKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
+ A +++++ + P ++++ + G +++A +
Sbjct: 458 DSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAID 497
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 80/409 (19%), Positives = 150/409 (36%), Gaps = 53/409 (12%)
Query: 57 LDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGK 116
L Q G + + +I S K AL++ + M G+ +A+ +D +
Sbjct: 359 LTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCD 418
Query: 117 VRGLESAETYFNSLNDED--KVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALN 174
LE A + F+ L + + +Y +L++ Y + G +D + LM+KM
Sbjct: 419 EGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHT 478
Query: 175 YNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEME 234
YN ++ + ++ D+L MK+ G+ P ++ I I + + + ++M
Sbjct: 479 YNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMI 538
Query: 235 SQS----------HISMDW--------------------------GTYSTVANYYIIAGL 258
S IS DW TY+ + Y+ AGL
Sbjct: 539 SSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGL 598
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEM--MKFWGLQKIKCKKQLNRD 316
KEKA K V D Y+ L+++ + + D K W + ++ ++L
Sbjct: 599 KEKAFFAHVKMLS-VPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQ 657
Query: 317 ------------YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGM 364
Y +L L LEE E +L + + + D + + +L Y M
Sbjct: 658 MCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEM 717
Query: 365 IEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAV 413
+A + + + P S ++ +G D + A + L +
Sbjct: 718 YREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGL 766
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/372 (21%), Positives = 160/372 (43%), Gaps = 17/372 (4%)
Query: 83 KRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV--DKLY 140
K F ++++E+ G + +V + +D K +E A+ F + V ++ Y
Sbjct: 181 KSFDLLIELTEF----GFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTY 236
Query: 141 GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKE 200
L+N + G+ + + +KM+E G F + YN +M G+ + V +M+E
Sbjct: 237 TVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRE 296
Query: 201 NGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKE 260
GV + +Y I +L+ V+ +M+S I+ + TY+T+ + + G
Sbjct: 297 RGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDG-INPNLITYNTLIDGFCGVGKLG 355
Query: 261 KAIIYLKKCEDIVSK--SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
KA L C D+ S+ S + YN L+S + G+ K + + K Y
Sbjct: 356 KA---LSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYT 412
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
++ + + +E+A ++ E D ++++ G+ KG + +A + K +V+K
Sbjct: 413 ILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEK 472
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNR 438
P ++ + GY + + +A + +KE E K P + +++ L R
Sbjct: 473 NCEPNEVIYNTMILGYCKEGSSYRALKLLKEM-----EEKELAPNVASYRYMIEVLCKER 527
Query: 439 DVEEVEAFVSSL 450
+E E V +
Sbjct: 528 KSKEAERLVEKM 539
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/343 (18%), Positives = 148/343 (43%), Gaps = 49/343 (14%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNT------------ 185
+LY ++N YV+ ++ S+S +M + G + +N ++ +
Sbjct: 95 RLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE 154
Query: 186 ----------------------GQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSEL 223
G+ EK D+L+++ E G P+ Y I+ + E+
Sbjct: 155 NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEI 214
Query: 224 SSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAI-IYLKKCEDIVSKSKDALGY 282
+++ EM ++ + TY+ + N G+K++ +Y K ED V + Y
Sbjct: 215 EKAKDLFFEMGKLGLVANER-TYTVLINGLFKNGVKKQGFEMYEKMQEDGV--FPNLYTY 271
Query: 283 NHLISHYASLG-NKDEMMKFWGLQK--IKCKKQLNRDYITMLGSLVKIGELEEAEKMLEE 339
N +++ G KD F +++ + C Y T++G L + +L EA K++++
Sbjct: 272 NCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIV---TYNTLIGGLCREMKLNEANKVVDQ 328
Query: 340 WELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNN 399
+ + N ++ G+ G + KA ++ +++ +G +P+ +++I+ +G+ K +
Sbjct: 329 MKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGD 388
Query: 400 MEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEE 442
A + +KE E + +P + ++D + ++E+
Sbjct: 389 TSGAAKMVKEM-----EERGIKPSKVTYTILIDTFARSDNMEK 426
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 122/275 (44%), Gaps = 41/275 (14%)
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
+++ + + G +D++ L+ +M G +A YN ++ YT ++ +VL +M+ G
Sbjct: 139 VVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMESGG 198
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
V P +Y I ++ ++S +E+V E++ + +++ D YS V N Y AG +A
Sbjct: 199 VEPTVGTYTILVDGLSTAGDISKVESVFDEIK-RKNVAGDVYFYSAVINAYCRAGNVRRA 257
Query: 263 IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLG 322
+C +GN E + R Y ++
Sbjct: 258 SEVFDEC----------------------VGNGIEPNE--------------RTYGALIN 281
Query: 323 SLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTP 382
KIG++E AE +L + +L ++ + N ++ GY + GM++KA + + + G
Sbjct: 282 GFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQL 341
Query: 383 TPNSWSIIAAGYADKNNMEKAFECMKEALAVHEEN 417
+++ +A G N ME A K+ L + EN
Sbjct: 342 DVYTYNTLACGLCRVNRMEDA----KKLLHIMTEN 372
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 79/393 (20%), Positives = 163/393 (41%), Gaps = 15/393 (3%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
+LD+ G K++ ++ +K +V + M G+ +V + + +D +
Sbjct: 155 LLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMESGGVEPTVGTYTILVDGLS 214
Query: 116 KVRGLESAETYFNSLNDEDKVDKLY--GALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
+ E+ F+ + ++ +Y A++N Y R G V + + + G +
Sbjct: 215 TAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRASEVFDECVGNGIEPNER 274
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
Y ++ + GQ E +L DM+ GV + + I+ Y + + M
Sbjct: 275 TYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVM 334
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS---KDALGYNHLISHYA 290
E I +D TY+T+A E A KK I++++ + + Y LIS ++
Sbjct: 335 ERMG-IQLDVYTYNTLACGLCRVNRMEDA----KKLLHIMTENGVESNYVSYTTLISIHS 389
Query: 291 SLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFR 350
G+ E + + + K + Y M+ +K G + EAE+ +E E D
Sbjct: 390 KEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVY 449
Query: 351 VPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEA 410
++ G+ G ++ A + +E+ ++G P +++ + +G A + E+AF+
Sbjct: 450 TYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNM 509
Query: 411 LAVHEENKFWRPKPSLVSSILDWLGDNRDVEEV 443
LA P +L S ++ L ++ +E+
Sbjct: 510 LAAG-----LTPDDTLYSMLVGSLHTDKRKDEI 537
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/326 (20%), Positives = 150/326 (46%), Gaps = 10/326 (3%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
++R L A V + M +G+ +V + + + L+ AET +++
Sbjct: 122 LMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAG 181
Query: 135 KVDKLY--GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+Y GAL+ R G ++++ + +KM G +A+ + ++ + G E +
Sbjct: 182 VTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETML 241
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
++ +M+E GV PD +Y +N +L S ++ EM S + + D TY+T+ +
Sbjct: 242 ELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRS-AGLRPDTVTYTTLIDG 300
Query: 253 YIIAGLKEKAI-IYLKKCEDIVSKSK--DALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
Y KE+ + + ++ +++V++ D + Y LIS + G + + G
Sbjct: 301 YC----KEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAG 356
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKAD 369
+ N Y ++ + + G+++ ++L+E + N+I+ G+ + G ++ AD
Sbjct: 357 LEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNAD 416
Query: 370 AVLKEIVKKGKTPTPNSWSIIAAGYA 395
+L ++ G +P +++I+ G+
Sbjct: 417 MLLNAMINIGVSPDDITYNILLDGHC 442
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 6/116 (5%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +++ + R+G V L L+++M+ G + YN IM + GQ K D+LL+
Sbjct: 364 YTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQM-KNADMLLNAM 422
Query: 200 EN-GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYI 254
N GV PD+ +Y I ++ + +++ +E E++S D G Y+++ +
Sbjct: 423 INIGVSPDDITYNILLDGHCKHGKVTDIE----ELKSAKGTVPDLGVYTSIVGEIV 474
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 60/310 (19%), Positives = 121/310 (39%), Gaps = 55/310 (17%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
KL+ L+ VR G + + ++ +M+ G + +++N ++ G + +
Sbjct: 117 KLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRR 176
Query: 198 MKENGVPPDNFSY---------------------RIC--------------INSYGARSE 222
M E GV PD ++Y ++C I+++ + +
Sbjct: 177 MSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGD 236
Query: 223 LSSMENVLQEMESQSHISMDWGTYSTVANYYIIA-GLKEKAIIYLKKCEDIVSKSKDALG 281
+M + +EM + + D TY+ + N A LK + I ++ D +
Sbjct: 237 AETMLELHREMRERG-VRPDAVTYNAIVNGLCRARDLKSASGIVVEM--RSAGLRPDTVT 293
Query: 282 YNHLISHYASLGNKDEMMKF--------WGLQKIKCKKQLNRDYITMLGSLVKIGELEEA 333
Y LI Y D M+ GL ++ Y ++ L K G +A
Sbjct: 294 YTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVT--------YTALISGLSKAGRSADA 345
Query: 334 EKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAG 393
E++L E + D +++ + +KG ++ +LKE+ KG+ P ++++I G
Sbjct: 346 ERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNG 405
Query: 394 YADKNNMEKA 403
+ M+ A
Sbjct: 406 FCKLGQMKNA 415
>gi|15228104|ref|NP_181260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216851|sp|Q9ZUU3.1|PP190_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g37230
gi|4056478|gb|AAC98044.1| unknown protein [Arabidopsis thaliana]
gi|28973644|gb|AAO64144.1| unknown protein [Arabidopsis thaliana]
gi|110736716|dbj|BAF00321.1| hypothetical protein [Arabidopsis thaliana]
gi|330254276|gb|AEC09370.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 757
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 84/408 (20%), Positives = 171/408 (41%), Gaps = 24/408 (5%)
Query: 79 LRSRKRFKHALQVSEWMSGQGLAFSVHD-HAVQLDLIGKVRGLESAETYFNSLN------ 131
L K+ +HALQ W GL D H + ++G+V L A +
Sbjct: 124 LHGAKKLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPW 183
Query: 132 DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
DED ++ L+ Y + G+V ES+ + QKMK++G + +YN + + G++
Sbjct: 184 DED----MFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMA 239
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
M GV P +Y + + + L + ++M+++ IS D T++T+ N
Sbjct: 240 KRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRG-ISPDDATFNTMIN 298
Query: 252 YYI-IAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCK 310
+ + E ++++ + + S + Y +I Y ++ D+ ++ + +
Sbjct: 299 GFCRFKKMDEAEKLFVEMKGNKIGPS--VVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGI 356
Query: 311 KQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYC-YDFRVPNIILLGYSQKGMIEKAD 369
+ Y T+L L G++ EA+ +L+ D + +L+ S+ G + A
Sbjct: 357 EPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAAT 416
Query: 370 AVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECM-----KEALAVHEENKFWRPKP 424
VLK + + ++ + +A + + KE + H++ +P
Sbjct: 417 EVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDT--LEMEP 474
Query: 425 SLVSSILDWLGDNRDVEEVEA-FVSSLKIKVQKRNMYHALTEAHIRSG 471
S + I+++L +N + E F +K VQ ++ + L H + G
Sbjct: 475 SAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALNNLIRGHAKEG 522
>gi|297812025|ref|XP_002873896.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319733|gb|EFH50155.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 507
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 139/332 (41%), Gaps = 40/332 (12%)
Query: 102 FSVHDHAVQL----DLIGKVR-GLESAETYFNSLNDEDKVD------------------- 137
F +HD +++ +I +V+ L + T N L D +VD
Sbjct: 138 FDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVDLARKLLLYAKHNLALQPNT 197
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMG-SFGSALNYNGIM-CLYTNTGQHEKIPDVL 195
++ L+ + + G +D + ++++MK G S+ +++ Y+ +M CL+ + E + ++
Sbjct: 198 CIFNILVKHHCKNGDIDSAFRVVEEMKRSGISYPNSITYSTLMDCLFAQSRSKEAV-ELF 256
Query: 196 LDM-KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYI 254
DM + G+ PD + + IN + E+ + +L M+ G V NY
Sbjct: 257 EDMISKRGISPDPVIFNVMINGFCRSGEVERAKMILDFMKKN-------GCNPNVYNYSA 309
Query: 255 IAG--LKEKAIIYLKKCEDIVSKSK---DALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
+ KE I K+ D V K+ D +GY L++ G DE MK G K
Sbjct: 310 LMNGFCKEGKIQEAKQVFDEVKKTGLKLDTVGYTTLMNCLCRNGEIDEAMKLLGEMKASR 369
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKAD 369
+ Y +L L G EEA +ML++W + IIL G +EKA
Sbjct: 370 CRADALTYNVILRGLSSEGRSEEALQMLDQWGCEGVHLNKGSYRIILNALCCNGELEKAV 429
Query: 370 AVLKEIVKKGKTPTPNSWSIIAAGYADKNNME 401
L + K+G P +W+ + + N E
Sbjct: 430 KFLSVMSKRGIWPHHATWNELVVRLCESGNTE 461
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 119/270 (44%), Gaps = 9/270 (3%)
Query: 140 YGALLNCYVREGLVDESLSLMQKM-KEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
Y L++C + E++ L + M + G + +N ++ + +G+ E+ +L M
Sbjct: 236 YSTLMDCLFAQSRSKEAVELFEDMISKRGISPDPVIFNVMINGFCRSGEVERAKMILDFM 295
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
K+NG P+ ++Y +N + ++ + V E++ ++ + +D Y+T+ N G
Sbjct: 296 KKNGCNPNVYNYSALMNGFCKEGKIQEAKQVFDEVK-KTGLKLDTVGYTTLMNCLCRNGE 354
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDE---MMKFWGLQKIKCKKQLNR 315
++A+ L + + ++ DAL YN ++ +S G +E M+ WG + + K
Sbjct: 355 IDEAMKLLGEMKASRCRA-DALTYNVILRGLSSEGRSEEALQMLDQWGCEGVHLNKG--- 410
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
Y +L +L GELE+A K L N +++ + G E VL
Sbjct: 411 SYRIILNALCCNGELEKAVKFLSVMSKRGIWPHHATWNELVVRLCESGNTEIGVRVLIGF 470
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
+ G P P SW + + + FE
Sbjct: 471 LGIGLIPAPKSWGAVVESICKERKLVHVFE 500
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 72/151 (47%), Gaps = 2/151 (1%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED-KVDKL-YGALLN 145
A + ++M G +V++++ ++ K ++ A+ F+ + K+D + Y L+N
Sbjct: 288 AKMILDFMKKNGCNPNVYNYSALMNGFCKEGKIQEAKQVFDEVKKTGLKLDTVGYTTLMN 347
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
C R G +DE++ L+ +MK AL YN I+ ++ G+ E+ +L GV
Sbjct: 348 CLCRNGEIDEAMKLLGEMKASRCRADALTYNVILRGLSSEGRSEEALQMLDQWGCEGVHL 407
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQ 236
+ SYRI +N+ EL L M +
Sbjct: 408 NKGSYRIILNALCCNGELEKAVKFLSVMSKR 438
>gi|225457536|ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial [Vitis vinifera]
gi|297745544|emb|CBI40709.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 143/333 (42%), Gaps = 47/333 (14%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
VL + G + + R++ R R +++ + QV M G++ H + V +D G
Sbjct: 383 VLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFG 442
Query: 116 KVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNY 175
K NC +D +L+ +M+ G A+ +
Sbjct: 443 KC---------------------------NC------LDHALATFDRMRMEGVQPDAVTW 469
Query: 176 NGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMES 235
N ++ + +G H K ++ M+E+G P +Y I INS+G + ++ +L +M+S
Sbjct: 470 NTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQS 529
Query: 236 QSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNK 295
Q ++ + TY+T+ + Y +G + AI L+ + + K + YN LI+ YA G
Sbjct: 530 QGLLA-NVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTM-YNALINAYAQRGLS 587
Query: 296 DEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRV-PNI 354
++ + + + + K + +L SL I E + E + + Y + + P++
Sbjct: 588 EQAINAFRVMRADGLKP----SVLVLNSL--INAFGEDRRDAEAFSVLQYMKENDLKPDV 641
Query: 355 ILLGYSQKGMI-----EKADAVLKEIVKKGKTP 382
+ K +I +K AV +E+ G TP
Sbjct: 642 VTYTTLMKALIRVEKFDKVPAVYEEMTLSGCTP 674
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 154/359 (42%), Gaps = 36/359 (10%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
LY L++ R + E+ L Q+ + L YN ++ EK +++ M
Sbjct: 156 LYSILIHALGRSEKLYEAFLLSQRQTL-----TPLTYNALIGACARNDDLEKALNLMSRM 210
Query: 199 KENGVPPDNFSYRICINSYGA--RSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
+ +G P D +Y I S +S+ S ++ + E+ES I +D + + + +
Sbjct: 211 RRDGFPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESD-KIELDGQLLNDIIVGFAKS 269
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKD---------EMMKFWGLQKI 307
G +A+ +L + K A L++ +LGN E +K GL
Sbjct: 270 GDVNRAMSFLAMVQGNGLSPKTAT----LVAVITALGNAGRTEEAEAIFEELKEGGLMP- 324
Query: 308 KCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEK 367
R Y +L VK G L++AE ++ E E S + D ++++ Y+ G E
Sbjct: 325 -----RTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWES 379
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLV 427
A VLKE+ G P +S I A Y D+ +K+F+ ++E N P
Sbjct: 380 ARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREM-----RNSGVSPDRHFY 434
Query: 428 SSILDWLGDNRDVEEVEAFVSSLKIK-VQKRNM-YHALTEAHIRSGQ--EVDGLLESMK 482
+ ++D G ++ A ++++ VQ + ++ L + H +SG + + L E+M+
Sbjct: 435 NVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQ 493
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 166/393 (42%), Gaps = 20/393 (5%)
Query: 58 DQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKV 117
D+ L+GQ +++ +I A+ + G GL+ + +G
Sbjct: 250 DKIELDGQLLND-----IIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNA 304
Query: 118 RGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNY 175
E AE F L + + + Y ALL YV+ G + ++ S++ +M+ G Y
Sbjct: 305 GRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTY 364
Query: 176 NGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMES 235
+ ++ Y N G+ E VL +M+ +GV P+++ + + SY R + VL+EM +
Sbjct: 365 SLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRN 424
Query: 236 QSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLG-- 293
S +S D Y+ + + + + A+ + + DA+ +N LI + G
Sbjct: 425 -SGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMR-MEGVQPDAVTWNTLIDCHCKSGHH 482
Query: 294 NKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPN 353
NK E + F +Q+ C Y M+ S + E+ + +L + + +
Sbjct: 483 NKAEEL-FEAMQESGCSP-CTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYT 540
Query: 354 IILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAV 413
++ Y Q G + A L+ + G P+ ++ + YA + E+A + A
Sbjct: 541 TLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAFRVMRA- 599
Query: 414 HEENKFWRPKPSLVSSILDWLGDNRDVEEVEAF 446
+P +++S+++ G++R + EAF
Sbjct: 600 ----DGLKPSVLVLNSLINAFGEDR--RDAEAF 626
>gi|222630937|gb|EEE63069.1| hypothetical protein OsJ_17877 [Oryza sativa Japonica Group]
Length = 702
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/395 (20%), Positives = 163/395 (41%), Gaps = 48/395 (12%)
Query: 47 GDPDVSLTPVLDQWVLE-GQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVH 105
G DV + +LD+ L G ++ V+ L R++ ALQ+ + QG+ ++
Sbjct: 67 GQHDV-VCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIV 125
Query: 106 DHAVQLDLIGKVRG------------------------------------LESAETYFNS 129
+ V LD+ G++ L+ A +F
Sbjct: 126 TYNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFED 185
Query: 130 LNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQ 187
L V + Y ALL + + G E+L ++++M++ G A+ YN + Y G
Sbjct: 186 LKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGF 245
Query: 188 HEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYS 247
E+ L M G+ P+ F+Y + +Y + + M+ ++ + TY+
Sbjct: 246 FEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVP-NVNTYN 304
Query: 248 TVANYYIIAGLKEKAIIYLKKCEDIVSK--SKDALGYNHLISHYASLGNKDEMMKFWGLQ 305
+ + + G K + L+ E++ + + + +N +++ G +D + +
Sbjct: 305 LI---FGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGM 361
Query: 306 KIKCKKQLNRD-YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGM 364
K C +L+RD Y T++ + + G A KM +E S + N +L S++G
Sbjct: 362 K-SCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGD 420
Query: 365 IEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNN 399
A +++ +++K G P S+S++ YA N
Sbjct: 421 WSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGN 455
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 93/410 (22%), Positives = 171/410 (41%), Gaps = 28/410 (6%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETY----FNSL 130
+ L + RF L++ E MS G + L + GK RG+E T S
Sbjct: 306 IFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGK-RGMEDYVTRVLNGMKSC 364
Query: 131 NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEK 190
E D Y L++ Y R G + + +M G YN ++ + + G
Sbjct: 365 GVELSRDT-YNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWST 423
Query: 191 IPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVA 250
++ M +NG P++ SY + + Y + +E++ +E+ + I W T+
Sbjct: 424 AQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGT-IFPSWVILRTL- 481
Query: 251 NYYIIAGLKEKAIIYLKKCEDIVSKS---KDALGYNHLISHYASLGNKDEMMKFWGLQKI 307
+IA K + + ++K V D + +N +++ YA G + + + I
Sbjct: 482 ---VIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMF--DSI 536
Query: 308 KCKKQLNRDYIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGM 364
K + L+ D IT ++ K E EAEK+L++ + S D N ++ G+ ++G+
Sbjct: 537 K-QSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGL 595
Query: 365 IEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKP 424
I++A +L E++ G P ++ + GYA +A E + +H K P
Sbjct: 596 IKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVN--YMIHHNLK---PME 650
Query: 425 SLVSSILDWLGDNRDVEEVEAFVSSLKIKVQK--RNMYHALTEAHIRSGQ 472
++D + +E F+S + Q + + H L EA I+ Q
Sbjct: 651 LTYRRVVDSYCKAKRYDEAREFLSEISDTDQNFDQKLQHML-EARIKDAQ 699
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 90/452 (19%), Positives = 183/452 (40%), Gaps = 31/452 (6%)
Query: 53 LTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLD 112
+ +L++ G + + VI A+ E + +G V + L
Sbjct: 144 IVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQ 203
Query: 113 LIGKVRGLESAETYFNSLNDED-KVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFG 170
+ GK A + D + D + Y L Y R G +E+ + M G
Sbjct: 204 VFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLP 263
Query: 171 SALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVL 230
+ YN +M Y N G+ ++ + MK+NG P+ +Y + G +S ++M +L
Sbjct: 264 NTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEML 323
Query: 231 QEMESQSHIS---MDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLIS 287
+EM S+S + + W T V + + + +K C V S+D YN LIS
Sbjct: 324 EEM-SRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCG--VELSRDT--YNTLIS 378
Query: 288 HYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCY 347
Y G++ K + Y +L L + G+ A+ ++ + + +
Sbjct: 379 AYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKP 438
Query: 348 DFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSW----SIIAAGYADKN--NME 401
+ + +++L Y++ G +++ KE+ P SW +++ A + + +E
Sbjct: 439 NDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFP---SWVILRTLVIANFKCRRLEGVE 495
Query: 402 KAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNM-- 459
KAF+ +K + ++P + +S+L N + S+K ++
Sbjct: 496 KAFQEVKA--------QGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLIT 547
Query: 460 YHALTEAHIRSGQ--EVDGLLESMKADDIDED 489
Y++L + + +S + E + +L+ +K+ + D
Sbjct: 548 YNSLMDMYAKSNESWEAEKILKQLKSSQVKPD 579
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 114/277 (41%), Gaps = 44/277 (15%)
Query: 149 REGLVDESLSLMQKMK-EMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDN 207
REG D L+ +M GS Y ++ + G++E+ + +++ GV P
Sbjct: 65 REGQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTI 124
Query: 208 FSYRICINSYG--ARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
+Y + ++ YG RS + +L+EM + + + D T STV GL ++A+ +
Sbjct: 125 VTYNVVLDVYGRMGRS-WPRIVALLEEMRA-AGVEPDDFTASTVIAACGRDGLLDQAVAF 182
Query: 266 LKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLV 325
ED+ ++ H + + +++ +G
Sbjct: 183 F---EDLKARG-----------HVPCVVTYNALLQVFG---------------------- 206
Query: 326 KIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPN 385
K G EA ++L+E E S D N + Y++ G E+A L + KG P
Sbjct: 207 KAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTF 266
Query: 386 SWSIIAAGYADKNNMEKA---FECMKEALAVHEENKF 419
+++ + YA+ +++A F+ MK+ V N +
Sbjct: 267 TYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTY 303
>gi|168063537|ref|XP_001783727.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664733|gb|EDQ51441.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 445
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 136/275 (49%), Gaps = 11/275 (4%)
Query: 140 YGALLNCYVREGLVDESLSLMQKM-KEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
Y L+ Y +G +E++ L+Q+M K++ S + +N ++ + + EK +V+ M
Sbjct: 98 YNTLIKGYGLDGQPEEAMKLLQEMAKDVNSKPNDRTFNMLIKAWAHDKNPEKARNVISMM 157
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
+ GV PD SY + + ENV+ EM++ ++ + TY V N YI AG
Sbjct: 158 RAAGVGPDVVSYNTLAQLFAKLGKPWDAENVITEMQN-VYLRPNERTYGIVINGYIAAGQ 216
Query: 259 KEKAIIYLKKCE-DIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
++++ +++ + D +S + +NHL+ Y+ ++ K + L + K + +
Sbjct: 217 IDESLRLIERMKMDGISPTIAV--FNHLVKGYSESMKPHKVDKVFKLMENFGVKPDVQTF 274
Query: 318 ITMLGSLVKIGELEEAEKML---EEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
++ + G ++EA+ +L +E++L D +I++ GYS++G E+ +A L
Sbjct: 275 GLIMNAWCSTGLIDEAKAVLLRMKEYDLQP---DVMAYSILVKGYSRQGRPEEGEAFLNI 331
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
++ + P +++ + +GY M+ A +E
Sbjct: 332 MIDENLKPNVITYTTVISGYCSLAQMDDAMRVFQE 366
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 118/272 (43%), Gaps = 17/272 (6%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y LL+ + +G + E L+Q+M+E A+ +N ++ Y G+ ++ ++L+MK
Sbjct: 28 YTLLLSSLISDGRLGEGPLLLQQMEEDNVIPDAIFFNTLLNGYCEAGKMKEAEALVLEMK 87
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E G P SY I YG + +LQEM + + T++ + +
Sbjct: 88 ERGCPLITSSYNTLIKGYGLDGQPEEAMKLLQEMAKDVNSKPNDRTFNMLIKAWAHDKNP 147
Query: 260 EKA--IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQ----- 312
EKA +I + + + D + YN L +A LG K W + + + Q
Sbjct: 148 EKARNVISMMRAAGV---GPDVVSYNTLAQLFAKLG------KPWDAENVITEMQNVYLR 198
Query: 313 -LNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAV 371
R Y ++ + G+++E+ +++E ++ V N ++ GYS+ K D V
Sbjct: 199 PNERTYGIVINGYIAAGQIDESLRLIERMKMDGISPTIAVFNHLVKGYSESMKPHKVDKV 258
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
K + G P ++ +I + +++A
Sbjct: 259 FKLMENFGVKPDVQTFGLIMNAWCSTGLIDEA 290
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 108/236 (45%), Gaps = 2/236 (0%)
Query: 137 DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
++ YG ++N Y+ G +DESL L+++MK G + +N ++ Y+ + + K+ V
Sbjct: 201 ERTYGIVINGYIAAGQIDESLRLIERMKMDGISPTIAVFNHLVKGYSESMKPHKVDKVFK 260
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
M+ GV PD ++ + +N++ + + + VL M+ + + D YS + Y
Sbjct: 261 LMENFGVKPDVQTFGLIMNAWCSTGLIDEAKAVLLRMK-EYDLQPDVMAYSILVKGYSRQ 319
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
G E+ +L D K + + Y +IS Y SL D+ M+ + + + +
Sbjct: 320 GRPEEGEAFLNIMIDENLKP-NVITYTTVISGYCSLAQMDDAMRVFQEMRSRSVFPNMQT 378
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
+ T++ + AE++LE + + D ++ + G +AD VL
Sbjct: 379 FRTLIWGFKEARWPRRAEEILEYIRKAGFTPDLECIELVADCWRSIGADGEADRVL 434
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 145/325 (44%), Gaps = 16/325 (4%)
Query: 158 SLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSY 217
S ++ ++ G + Y ++ + G+ + P +L M+E+ V PD + +N Y
Sbjct: 11 STLKNLRRDGHRPAKETYTLLLSSLISDGRLGEGPLLLQQMEEDNVIPDAIFFNTLLNGY 70
Query: 218 GARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKK-CEDIVSKS 276
++ E ++ EM+ + + +Y+T+ Y + G E+A+ L++ +D+ SK
Sbjct: 71 CEAGKMKEAEALVLEMKERG-CPLITSSYNTLIKGYGLDGQPEEAMKLLQEMAKDVNSKP 129
Query: 277 KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKM 336
D +N LI +A N ++ + + Y T+ K+G+ +AE +
Sbjct: 130 NDRT-FNMLIKAWAHDKNPEKARNVISMMRAAGVGPDVVSYNTLAQLFAKLGKPWDAENV 188
Query: 337 LEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYAD 396
+ E + + R I++ GY G I+++ +++ + G +PT ++ + GY++
Sbjct: 189 ITEMQNVYLRPNERTYGIVINGYIAAGQIDESLRLIERMKMDGISPTIAVFNHLVKGYSE 248
Query: 397 ---KNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK-I 452
+ ++K F+ M EN +P I++ ++E +A + +K
Sbjct: 249 SMKPHKVDKVFKLM--------ENFGVKPDVQTFGLIMNAWCSTGLIDEAKAVLLRMKEY 300
Query: 453 KVQKRNM-YHALTEAHIRSGQEVDG 476
+Q M Y L + + R G+ +G
Sbjct: 301 DLQPDVMAYSILVKGYSRQGRPEEG 325
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/326 (20%), Positives = 149/326 (45%), Gaps = 10/326 (3%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
++R L A V + M +G+ +V + + + L+ AET +++
Sbjct: 246 LMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAG 305
Query: 135 KVDKLY--GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+Y GAL+ R G ++++ + +KM G +A+ + ++ + G E +
Sbjct: 306 VTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETML 365
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
++ +M+E GV PD +Y +N +L S ++ EM S + D TY+T+ +
Sbjct: 366 ELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAG-LRPDTVTYTTLIDG 424
Query: 253 YIIAGLKEKAI-IYLKKCEDIVSKSK--DALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
Y KE+ + + ++ +++V++ D + Y LIS + G + + G
Sbjct: 425 YC----KEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAG 480
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKAD 369
+ N Y ++ + + G+++ ++L+E + N+I+ G+ + G ++ AD
Sbjct: 481 LEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNAD 540
Query: 370 AVLKEIVKKGKTPTPNSWSIIAAGYA 395
+L ++ G +P +++I+ G+
Sbjct: 541 MLLNAMINIGVSPDDITYNILLDGHC 566
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 58/113 (51%), Gaps = 6/113 (5%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +++ + R+G V L L+++M+ G + YN IM + GQ K D+LL+
Sbjct: 488 YTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQM-KNADMLLNAM 546
Query: 200 EN-GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
N GV PD+ +Y I ++ + +++ +E E++S D G Y+++
Sbjct: 547 INIGVSPDDITYNILLDGHCKHGKVTDIE----ELKSAKGTVPDLGVYTSIVG 595
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 62/315 (19%), Positives = 120/315 (38%), Gaps = 65/315 (20%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
KL+ L+ VR G + + ++ +M+ G + +++N ++ G + +
Sbjct: 241 KLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRR 300
Query: 198 MKENGVPPDNFSY-----------------------------------RICINSYGARSE 222
M E GV PD ++Y I I+++ + +
Sbjct: 301 MSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGD 360
Query: 223 LSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSK----- 277
+M + +EM + + D TY+ + N GL LK IV + +
Sbjct: 361 AETMLELHREMRERG-VRPDAVTYNAIVN-----GLCRAR--DLKSASGIVVEMRSAGLR 412
Query: 278 -DALGYNHLISHYASLGNKDEMMKF--------WGLQKIKCKKQLNRDYITMLGSLVKIG 328
D + Y LI Y D M+ GL ++ Y ++ L K G
Sbjct: 413 PDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVT--------YTALISGLSKAG 464
Query: 329 ELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWS 388
+AE++L E + D +++ + +KG ++ +LKE+ KG+ P +++
Sbjct: 465 RSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYN 524
Query: 389 IIAAGYADKNNMEKA 403
+I G+ M+ A
Sbjct: 525 VIMNGFCKLGQMKNA 539
>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Glycine max]
Length = 1012
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 100/493 (20%), Positives = 194/493 (39%), Gaps = 82/493 (16%)
Query: 59 QWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVR 118
Q V+ G I + ++ L + K A ++ + + L + + LD KV
Sbjct: 331 QMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVG 390
Query: 119 GLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYN 176
+E AET + E + + + +++N Y ++G++++++ +++KM +M + Y
Sbjct: 391 DVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYA 450
Query: 177 GIMCLYTNTGQHEK------------------IPDVLLD-------MKE----------N 201
++ Y TGQHE I D+LL+ MKE
Sbjct: 451 ILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSK 510
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
G+ D F+Y ++ Y S+ +V+QEM ++ + D Y+ + + G E
Sbjct: 511 GIYLDVFNYSSLMDGYFKEGNESAALSVVQEM-TEKDMQFDVVAYNALTKGLLRLGKYEP 569
Query: 262 AIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITML 321
++ + E + + D + YN +++ Y G + + K Y ++
Sbjct: 570 KSVFSRMIE--LGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILI 627
Query: 322 GSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQK------------------- 362
G L K G +E+ +L E Y + +L YS+
Sbjct: 628 GGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLN 687
Query: 363 ----------------GMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFEC 406
GM +KA+ VL E+V KG + +++ + GY +++EKAF
Sbjct: 688 LNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNT 747
Query: 407 MKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK--VQKRNMYHALT 464
+ L P + +++L+ L N + + + VS ++ + V Y+ L
Sbjct: 748 YSQMLV-----SGISPNITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILV 802
Query: 465 EAHIRSGQEVDGL 477
H R G + D +
Sbjct: 803 SGHGRVGNKRDSI 815
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 125/298 (41%), Gaps = 36/298 (12%)
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
LL Y R D L + +K+ +MG + + YN ++ + G +K VL +M G
Sbjct: 661 LLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKG 720
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
+ D +Y I Y S + N +M S IS + TY+ ++ GL
Sbjct: 721 ISADIVTYNALIRGYCTGSHVEKAFNTYSQMLV-SGISPNITTYNA-----LLEGLSTNG 774
Query: 263 IIYLKKCEDIVSKSK------DALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
+ ++ + +VS+ + +A YN L+S + +GNK + +K + K
Sbjct: 775 L--MRDADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTGT 832
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPN-----IILLGYSQKGMIEKADAV 371
Y ++ K G++ +A ++L E R+PN +++ G+ + + D +
Sbjct: 833 YNVLIQDYAKAGKMRQARELLNEM-----LTRGRIPNSSTYDVLICGWCKLSCQPEMDRL 887
Query: 372 LK------------EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEEN 417
LK E+ +KG P+ ++ I++ ++ + A +K + ++
Sbjct: 888 LKLSYQNEAKKLLREMCEKGHVPSESTLMYISSNFSAPGKRDDAKRLLKTVIGLYRST 945
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 170/408 (41%), Gaps = 71/408 (17%)
Query: 68 SELELQRVIRQLRSRKRFKHAL-QVSEWMSGQG-LAFSVHDHAVQLDLIGKV--RGLESA 123
SE+ L V+ + S H+L +V + G L SV DH ++ RGL A
Sbjct: 34 SEMVLCGVVPNVFSVNLLVHSLCKVGDLGLALGYLRNSVFDHVTYNTVVWGFCKRGL--A 91
Query: 124 ETYFNSLNDEDKVDKLYGA-----LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGI 178
+ F L++ K + + L+ Y + GLV + +M + G A+ N +
Sbjct: 92 DQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQYAEWIMGNLVGGGVPLDAIGLNTL 151
Query: 179 MCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM----- 233
+ Y G + D++ D +NGV PD +Y +N++ R +L+ E+V+ E+
Sbjct: 152 VDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGFRR 211
Query: 234 ESQSHISMDWGTYS---------TVANY--YIIAGLKEKAI----------IYLKKCEDI 272
+ +S + D G + TV + I A K + I I D+
Sbjct: 212 DDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDV 271
Query: 273 VSKSKDALGY-----------------------NHL--ISHYASLGNKDEMMKFWGLQKI 307
V+ S G NH+ + ++L +M+ + Q
Sbjct: 272 VTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQ 331
Query: 308 KCKKQLNRDYI---TMLGSLVKIGELEEAEKMLE---EWELSCYCYDFRVPNIILLGYSQ 361
+ ++ D + TM+ L K G+ +EAE+M + + L C + +L G+ +
Sbjct: 332 MVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTA---LLDGHCK 388
Query: 362 KGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
G +E A+ VL+++ K+ P ++S I GYA K + KA E +++
Sbjct: 389 VGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRK 436
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 68/341 (19%), Positives = 142/341 (41%), Gaps = 37/341 (10%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ++ + + GL D+ L+ +M + G ++ N ++ Y G + ++ ++
Sbjct: 78 YNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQYAEWIMGNLV 137
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMES--QSHISMDWGTYSTVANYYIIAG 257
GVP D ++ Y E+ + L +E ++ + D TY+T+ N + G
Sbjct: 138 GGGVPLDAIGLNTLVDGY---CEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKRG 194
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
L K E +V+ + LG+ + + N + + GL+ ++ +
Sbjct: 195 -------DLAKAESVVN---EILGFRR--DDESGVLNDCGVETWDGLRDLQ---PTVVTW 239
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
T++ + K +++ + E+ +S D + IL G + G + +A +L+E+
Sbjct: 240 TTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYN 299
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKP---SLVSSILDWL 434
G P S++ I + + +AF H+ R L ++++D L
Sbjct: 300 MGLDPNHVSYTTIISALLKSGRVMEAFN--------HQSQMVVRGISIDLVLCTTMMDGL 351
Query: 435 ---GDNRDVEEVEAFVSSLKIK-VQKRNMYHALTEAHIRSG 471
G +++ EE+ F + LK+ V Y AL + H + G
Sbjct: 352 FKAGKSKEAEEM--FQTILKLNLVPNCVTYTALLDGHCKVG 390
>gi|125551633|gb|EAY97342.1| hypothetical protein OsI_19265 [Oryza sativa Indica Group]
Length = 793
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/386 (20%), Positives = 159/386 (41%), Gaps = 47/386 (12%)
Query: 56 VLDQWVLE-GQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLI 114
+LD+ L G ++ V+ L R++ ALQ+ + QG+ ++ + V LD+
Sbjct: 166 LLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVY 225
Query: 115 GKVRG------------------------------------LESAETYFNSLNDEDKVDK 138
G++ L+ A +F L V
Sbjct: 226 GRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPC 285
Query: 139 L--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
+ Y ALL + + G E+L ++++M++ G A+ YN + Y G E+ L
Sbjct: 286 VVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLD 345
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
M G+ P+ F+Y + +Y + + M+ ++ + TY+ + + +
Sbjct: 346 TMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVP-NVNTYNLI---FGML 401
Query: 257 GLKEKAIIYLKKCEDIVSK--SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN 314
G K + L+ E++ + + + +N +++ G +D + + K C +L+
Sbjct: 402 GKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMK-SCGVELS 460
Query: 315 RD-YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
RD Y T++ + + G A KM +E S + N +L S++G A +++
Sbjct: 461 RDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVS 520
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNN 399
+++K G P S+S++ YA N
Sbjct: 521 KMLKNGFKPNDQSYSLLLQCYAKGGN 546
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 93/410 (22%), Positives = 171/410 (41%), Gaps = 28/410 (6%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETY----FNSL 130
+ L + RF L++ E MS G + L + GK RG+E T S
Sbjct: 397 IFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGK-RGMEDYVTRVLNGMKSC 455
Query: 131 NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEK 190
E D Y L++ Y R G + + +M G YN ++ + + G
Sbjct: 456 GVELSRDT-YNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWST 514
Query: 191 IPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVA 250
++ M +NG P++ SY + + Y + +E++ +E+ + I W T+
Sbjct: 515 AQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGT-IFPSWVILRTL- 572
Query: 251 NYYIIAGLKEKAIIYLKKCEDIVSKS---KDALGYNHLISHYASLGNKDEMMKFWGLQKI 307
+IA K + + ++K V D + +N +++ YA G + + + I
Sbjct: 573 ---VIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMF--DSI 627
Query: 308 KCKKQLNRDYIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGM 364
K + L+ D IT ++ K E EAEK+L++ + S D N ++ G+ ++G+
Sbjct: 628 K-QSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGL 686
Query: 365 IEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKP 424
I++A +L E++ G P ++ + GYA +A E + +H K P
Sbjct: 687 IKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVN--YMIHHNLK---PME 741
Query: 425 SLVSSILDWLGDNRDVEEVEAFVSSLKIKVQK--RNMYHALTEAHIRSGQ 472
++D + +E F+S + Q + + H L EA I+ Q
Sbjct: 742 LTYRRVVDSYCKAKRYDEAREFLSEISDTDQNFDQKLQHML-EARIKDAQ 790
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 87/420 (20%), Positives = 172/420 (40%), Gaps = 35/420 (8%)
Query: 87 HALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE----DKVDKLYGA 142
A+ E + +G V + L + GK A + D D V Y
Sbjct: 269 QAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVT--YNE 326
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
L Y R G +E+ + M G + YN +M Y N G+ ++ + MK+NG
Sbjct: 327 LAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNG 386
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHIS---MDWGTYSTVANYYIIAGLK 259
P+ +Y + G +S ++M +L+EM S+S + + W T V +
Sbjct: 387 YVPNVNTYNLIFGMLGKKSRFTAMLEMLEEM-SRSGCTPNRVTWNTMLAVCGKRGMEDYV 445
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
+ + +K C V S+D YN LIS Y G++ K + Y
Sbjct: 446 TRVLNGMKSCG--VELSRDT--YNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNA 501
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
+L L + G+ A+ ++ + + + + + +++L Y++ G +++ KE+
Sbjct: 502 LLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGT 561
Query: 380 KTPTPNSW----SIIAAGYADKN--NMEKAFECMKEALAVHEENKFWRPKPSLVSSILDW 433
P SW +++ A + + +EKAF+ +K + ++P + +S+L
Sbjct: 562 IFP---SWVILRTLVIANFKCRRLEGVEKAFQEVKA--------QGYKPDLVIFNSMLAM 610
Query: 434 LGDNRDVEEVEAFVSSLKIKVQKRNM--YHALTEAHIRSGQ--EVDGLLESMKADDIDED 489
N + S+K ++ Y++L + + +S + E + +L+ +K+ + D
Sbjct: 611 YAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPD 670
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 114/277 (41%), Gaps = 44/277 (15%)
Query: 149 REGLVDESLSLMQKMK-EMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDN 207
REG D L+ +M GS Y ++ + G++E+ + +++ GV P
Sbjct: 156 REGQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTI 215
Query: 208 FSYRICINSYG--ARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
+Y + ++ YG RS + +L+EM + + + D T STV GL ++A+ +
Sbjct: 216 VTYNVVLDVYGRMGRS-WPRIVALLEEMRA-AGVEPDDFTASTVIAACGRDGLLDQAVAF 273
Query: 266 LKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLV 325
ED+ ++ H + + +++ +G
Sbjct: 274 F---EDLKARG-----------HVPCVVTYNALLQVFG---------------------- 297
Query: 326 KIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPN 385
K G EA ++L+E E S D N + Y++ G E+A L + KG P
Sbjct: 298 KAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTF 357
Query: 386 SWSIIAAGYADKNNMEKA---FECMKEALAVHEENKF 419
+++ + YA+ +++A F+ MK+ V N +
Sbjct: 358 TYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTY 394
>gi|356556194|ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 829
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 98/455 (21%), Positives = 198/455 (43%), Gaps = 66/455 (14%)
Query: 69 ELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLD-----LIGKVRGLESA 123
E + +++ L ++ AL + EW G D ++LD L+ ++ G ES
Sbjct: 140 EADFPSLLKALDLSGNWERALLLFEW----GWLHFGSDQNLRLDNQVVELMVRILGRESQ 195
Query: 124 ETYFNSLNDEDKVDKL------YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNG 177
+ + L D V+K Y +L+ Y R G ++ L KMKE+G + + YN
Sbjct: 196 HSIASKLFDLIPVEKYSLDVRAYTTILHSYARTGKYKRAIDLFGKMKEIGLDPTLVTYNV 255
Query: 178 IMCLYTNTGQH-EKIPDVLLDMKENGVPPDNFSYRICINSYG-------ARSELSSME-- 227
++ +Y G+ ++I ++L +M+ G+ D F+ I++ G AR L+ ++
Sbjct: 256 MLDVYGKMGRSWDRILELLDEMRSKGLELDEFTCSTVISACGREGMLDEARKFLAELKFN 315
Query: 228 --------------------------NVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
++L+EME ++ D TY+ +A Y+ AG ++
Sbjct: 316 GYKPGTVTYNSMLQVFGKAGIYTEALSILKEME-DNNCPPDSVTYNELAATYVRAGFLDE 374
Query: 262 AIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQK-IKCKKQLNRDYI 318
+ + + + SK +A+ Y +I Y G +D+ ++ + L K + C + Y
Sbjct: 375 GMAVI---DTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNV-YTYN 430
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
++L L K E+ K+L E +L+ + N +L S++G + VL+E+
Sbjct: 431 SVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNC 490
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNR 438
G P ++++ + + YA + + + E + + P + +++L+ L
Sbjct: 491 GFEPDKDTFNTLISAYARCGSEVDSAKMYGEMV-----KSGFTPCVTTYNALLNALARRG 545
Query: 439 DVEEVEAFVSSLKIKVQK--RNMYHALTEAHIRSG 471
D + E+ + ++ K K N Y L + ++G
Sbjct: 546 DWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAG 580
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 139/319 (43%), Gaps = 21/319 (6%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ L++ Y R G +S + +M + G YN ++ G + V+ DM+
Sbjct: 499 FNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVIQDMR 558
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G P+ SY + ++ Y + +E V +E+ H+ W T+ ++ K
Sbjct: 559 TKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEI-YDGHVFPSWILLRTL----VLTNHK 613
Query: 260 EKAIIYLKKCEDIVSK---SKDALGYNHLISHYAS---LGNKDEMMKFWGLQKIKCKKQL 313
+ + +++ D + K D + N ++S +A EM+ F +C Q
Sbjct: 614 CRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFARNKMFSKAREMLHFIH----ECGLQP 669
Query: 314 NR-DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
N Y ++ V+ GE +AE++L+ + S D N ++ G+ +KG++++A VL
Sbjct: 670 NLFTYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEAIGVL 729
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILD 432
E+ KG PT +++ +GYA ++A E ++ + E N RP ++D
Sbjct: 730 SEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMI---EHN--CRPSELTYKILVD 784
Query: 433 WLGDNRDVEEVEAFVSSLK 451
EE FVS +K
Sbjct: 785 GYCKAGKYEEAMDFVSKIK 803
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/429 (20%), Positives = 173/429 (40%), Gaps = 27/429 (6%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
+LD+ +G ++ E VI A + + G + L + G
Sbjct: 273 LLDEMRSKGLELDEFTCSTVISACGREGMLDEARKFLAELKFNGYKPGTVTYNSMLQVFG 332
Query: 116 KVRGLESAETYFNSLNDED-KVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
K A + + D + D + Y L YVR G +DE ++++ M G +A+
Sbjct: 333 KAGIYTEALSILKEMEDNNCPPDSVTYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAI 392
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
Y ++ Y G+ + + MK+ G P+ ++Y + G +S + VL EM
Sbjct: 393 TYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEM 452
Query: 234 ESQSHIS--MDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYAS 291
+ W T V + K + +K C KD +N LIS YA
Sbjct: 453 KLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCG--FEPDKDT--FNTLISAYAR 508
Query: 292 LGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRV 351
G++ + K +G Y +L +L + G+ + AE ++++ + +
Sbjct: 509 CGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNENS 568
Query: 352 PNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSW----SIIAAGYADKN--NMEKAFE 405
+++L YS+ G ++ + V KEI P SW +++ + ++ ME+AF+
Sbjct: 569 YSLLLHCYSKAGNVKGIEKVEKEIYDGHVFP---SWILLRTLVLTNHKCRHLRGMERAFD 625
Query: 406 CMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNM--YHAL 463
+++ ++P +++S+L N+ + + + + N+ Y+ L
Sbjct: 626 QLQKY--------GYKPDLVVINSMLSMFARNKMFSKAREMLHFIHECGLQPNLFTYNCL 677
Query: 464 TEAHIRSGQ 472
+ ++R G+
Sbjct: 678 MDLYVREGE 686
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 83/195 (42%), Gaps = 6/195 (3%)
Query: 116 KVRGLESAETYFNSLNDEDKVDKLY--GALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
K R L E F+ L L ++L+ + R + ++ ++ + E G +
Sbjct: 613 KCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFARNKMFSKAREMLHFIHECGLQPNLF 672
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
YN +M LY G+ K +VL ++ +G PD SY I + + + VL EM
Sbjct: 673 TYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEAIGVLSEM 732
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLG 293
++ I TY+T + Y L ++A ++ + + + L Y L+ Y G
Sbjct: 733 TTKG-IQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSE-LTYKILVDGYCKAG 790
Query: 294 NKDEMMKFWGLQKIK 308
+E M F + KIK
Sbjct: 791 KYEEAMDF--VSKIK 803
>gi|115462947|ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|50878350|gb|AAT85125.1| unknown protein, contains pentatricopeptide (PPR) repeat, PF01535
[Oryza sativa Japonica Group]
gi|113578624|dbj|BAF16987.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|215695094|dbj|BAG90285.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 793
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/386 (20%), Positives = 159/386 (41%), Gaps = 47/386 (12%)
Query: 56 VLDQWVLE-GQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLI 114
+LD+ L G ++ V+ L R++ ALQ+ + QG+ ++ + V LD+
Sbjct: 166 LLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVY 225
Query: 115 GKVRG------------------------------------LESAETYFNSLNDEDKVDK 138
G++ L+ A +F L V
Sbjct: 226 GRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPC 285
Query: 139 L--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
+ Y ALL + + G E+L ++++M++ G A+ YN + Y G E+ L
Sbjct: 286 VVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLD 345
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
M G+ P+ F+Y + +Y + + M+ ++ + TY+ + + +
Sbjct: 346 TMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVP-NVNTYNLI---FGML 401
Query: 257 GLKEKAIIYLKKCEDIVSK--SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN 314
G K + L+ E++ + + + +N +++ G +D + + K C +L+
Sbjct: 402 GKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMK-SCGVELS 460
Query: 315 RD-YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
RD Y T++ + + G A KM +E S + N +L S++G A +++
Sbjct: 461 RDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVS 520
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNN 399
+++K G P S+S++ YA N
Sbjct: 521 KMLKNGFKPNDQSYSLLLQCYAKGGN 546
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 93/410 (22%), Positives = 171/410 (41%), Gaps = 28/410 (6%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETY----FNSL 130
+ L + RF L++ E MS G + L + GK RG+E T S
Sbjct: 397 IFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGK-RGMEDYVTRVLNGMKSC 455
Query: 131 NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEK 190
E D Y L++ Y R G + + +M G YN ++ + + G
Sbjct: 456 GVELSRDT-YNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWST 514
Query: 191 IPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVA 250
++ M +NG P++ SY + + Y + +E++ +E+ + I W T+
Sbjct: 515 AQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGT-IFPSWVILRTL- 572
Query: 251 NYYIIAGLKEKAIIYLKKCEDIVSKS---KDALGYNHLISHYASLGNKDEMMKFWGLQKI 307
+IA K + + ++K V D + +N +++ YA G + + + I
Sbjct: 573 ---VIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMF--DSI 627
Query: 308 KCKKQLNRDYIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGM 364
K + L+ D IT ++ K E EAEK+L++ + S D N ++ G+ ++G+
Sbjct: 628 K-QSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGL 686
Query: 365 IEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKP 424
I++A +L E++ G P ++ + GYA +A E + +H K P
Sbjct: 687 IKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVN--YMIHHNLK---PME 741
Query: 425 SLVSSILDWLGDNRDVEEVEAFVSSLKIKVQK--RNMYHALTEAHIRSGQ 472
++D + +E F+S + Q + + H L EA I+ Q
Sbjct: 742 LTYRRVVDSYCKAKRYDEAREFLSEISDTDQNFDQKLQHML-EARIKDAQ 790
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 87/420 (20%), Positives = 172/420 (40%), Gaps = 35/420 (8%)
Query: 87 HALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE----DKVDKLYGA 142
A+ E + +G V + L + GK A + D D V Y
Sbjct: 269 QAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVT--YNE 326
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
L Y R G +E+ + M G + YN +M Y N G+ ++ + MK+NG
Sbjct: 327 LAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNG 386
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHIS---MDWGTYSTVANYYIIAGLK 259
P+ +Y + G +S ++M +L+EM S+S + + W T V +
Sbjct: 387 YVPNVNTYNLIFGMLGKKSRFTAMLEMLEEM-SRSGCTPNRVTWNTMLAVCGKRGMEDYV 445
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
+ + +K C V S+D YN LIS Y G++ K + Y
Sbjct: 446 TRVLNGMKSCG--VELSRDT--YNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNA 501
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
+L L + G+ A+ ++ + + + + + +++L Y++ G +++ KE+
Sbjct: 502 LLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGT 561
Query: 380 KTPTPNSW----SIIAAGYADKN--NMEKAFECMKEALAVHEENKFWRPKPSLVSSILDW 433
P SW +++ A + + +EKAF+ +K + ++P + +S+L
Sbjct: 562 IFP---SWVILRTLVIANFKCRRLEGVEKAFQEVKA--------QGYKPDLVIFNSMLAM 610
Query: 434 LGDNRDVEEVEAFVSSLKIKVQKRNM--YHALTEAHIRSGQ--EVDGLLESMKADDIDED 489
N + S+K ++ Y++L + + +S + E + +L+ +K+ + D
Sbjct: 611 YAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPD 670
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 114/277 (41%), Gaps = 44/277 (15%)
Query: 149 REGLVDESLSLMQKMK-EMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDN 207
REG D L+ +M GS Y ++ + G++E+ + +++ GV P
Sbjct: 156 REGQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTI 215
Query: 208 FSYRICINSYG--ARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
+Y + ++ YG RS + +L+EM + + + D T STV GL ++A+ +
Sbjct: 216 VTYNVVLDVYGRMGRS-WPRIVALLEEMRA-AGVEPDDFTASTVIAACGRDGLLDQAVAF 273
Query: 266 LKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLV 325
ED+ ++ H + + +++ +G
Sbjct: 274 F---EDLKARG-----------HVPCVVTYNALLQVFG---------------------- 297
Query: 326 KIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPN 385
K G EA ++L+E E S D N + Y++ G E+A L + KG P
Sbjct: 298 KAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTF 357
Query: 386 SWSIIAAGYADKNNMEKA---FECMKEALAVHEENKF 419
+++ + YA+ +++A F+ MK+ V N +
Sbjct: 358 TYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTY 394
>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g54980, mitochondrial; Flags: Precursor
gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 851
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 163/371 (43%), Gaps = 20/371 (5%)
Query: 51 VSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSV-HDHAV 109
VS + D+ EG + + +I R + AL+ + M GL SV H H +
Sbjct: 356 VSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTI 415
Query: 110 QLDLIGKVRGLESAETYFNSLNDEDKVDKLYG-----ALLNCYVREGLVDESLSLMQKMK 164
+ G ++G + E L DE L +L+ ++G DE+ L+ KM+
Sbjct: 416 ---IQGWLKGQKHEEAL--KLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKME 470
Query: 165 EMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINS-YGARSEL 223
G + ++YN +M + + V ++ E G+ P+N++Y I I+ + E
Sbjct: 471 SRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQ 530
Query: 224 SSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYN 283
+++E V+ M S S+I ++ Y T+ N G KA L + + YN
Sbjct: 531 NALE-VVNHMTS-SNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYN 588
Query: 284 HLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT---MLGSLVKIGELEEAEKMLEEW 340
+I + G D + + + C ++ + IT ++ L K +++A +M +E
Sbjct: 589 SIIDGFFKEGEMDSAVAAY---EEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEM 645
Query: 341 ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNM 400
+ D ++ G+ ++ +E A A+ E++++G P+ ++ + +G+ + NM
Sbjct: 646 KNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNM 705
Query: 401 EKAFECMKEAL 411
A + K+ L
Sbjct: 706 VAALDLYKKML 716
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 127/278 (45%), Gaps = 11/278 (3%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFG-SALNYNGIMCLYTNTGQHEKIPDVLLD 197
+Y ++N + G ++ L+ M E S ++YN I+ + G+ + +
Sbjct: 550 VYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEE 609
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYI-IA 256
M NG+ P+ +Y +N + + + EM+++ + +D Y + + + +
Sbjct: 610 MCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKG-VKLDIPAYGALIDGFCKRS 668
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
++ + ++ + E+ ++ S+ YN LIS + +LGN M+ L K K L D
Sbjct: 669 NMESASALFSELLEEGLNPSQPI--YNSLISGFRNLGN---MVAALDLYKKMLKDGLRCD 723
Query: 317 ---YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
Y T++ L+K G L A ++ E + D + +I+ G S+KG K + +
Sbjct: 724 LGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFE 783
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
E+ K TP ++ + AG+ + N+++AF E L
Sbjct: 784 EMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEML 821
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 86/410 (20%), Positives = 178/410 (43%), Gaps = 27/410 (6%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE----DKVDKLYGAL 143
A +V + M GL +V + +D + K + L+ A + F +N + D+V + +L
Sbjct: 426 AFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVT--FCSL 483
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
++ ++G VD++ L ++M + +A+ Y ++ + G+ E + +M G
Sbjct: 484 IDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGC 543
Query: 204 PPDNF---SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKE 260
PD +Y C+ G E + +E++S+ I D +YS + + + AG
Sbjct: 544 SPDLRLLNAYMDCVFKAG---ETGKGRALFEEIKSRGFIP-DVMSYSILIHGLVKAGFAR 599
Query: 261 KA--IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
+ + Y K + V D YN I + G ++ + K K ++ Y
Sbjct: 600 ETYELFYAMKEQGCVL---DTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYG 656
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
+++ L KI L+EA + EE + + + + + ++ G+ + G I++A +++E+++K
Sbjct: 657 SVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQK 716
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNR 438
G TP +W+ + + +A C + + +N P S +++ L R
Sbjct: 717 GLTPNVYTWNCLLDALVKAEEINEALVCFQ-----NMKNLKGTPNHITYSILINGLCRVR 771
Query: 439 DVEEVEAFVSSLKIKVQKRN--MYHALTEAHIRSGQ--EVDGLLESMKAD 484
+ F ++ + K N Y + ++G E L E KA+
Sbjct: 772 KFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKAN 821
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 88/434 (20%), Positives = 164/434 (37%), Gaps = 59/434 (13%)
Query: 35 ARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEW 94
A L +S + + D+ LT + Q G ++S VIR R AL + +
Sbjct: 200 AYTTLIGALSSVQESDIMLT-LFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDE 258
Query: 95 MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV--DKLYGALLNCYVREGL 152
M L + + V +D GK ++ A +F+ + + D Y +++ +
Sbjct: 259 MKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNR 318
Query: 153 VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
+DE++ + ++M++ + A YN ++ Y + G+ ++ +L K G P +Y
Sbjct: 319 LDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNC 378
Query: 213 CINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA---------- 262
+ G + L +EM+ + + + TY+ + + AG E A
Sbjct: 379 ILTCLGKKGRLGEALRTFEEMKKDA--APNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEA 436
Query: 263 ---------------IIYLKKCEDIVS---------KSKDALGYNHLISHYASLGNKDEM 298
+ KK ++ S S D + + LI G D+
Sbjct: 437 GLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDA 496
Query: 299 MKFWGLQKIKCKKQLNRD-------YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRV 351
+ + ++ L+ D Y +++ S K G E+ K+ +E D R+
Sbjct: 497 YRLY-------EQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRL 549
Query: 352 PNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE---CMK 408
N + + G K A+ +EI +G P S+SI+ G + +E MK
Sbjct: 550 LNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMK 609
Query: 409 E---ALAVHEENKF 419
E L H N F
Sbjct: 610 EQGCVLDTHAYNTF 623
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 83/408 (20%), Positives = 156/408 (38%), Gaps = 72/408 (17%)
Query: 79 LRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDK 138
++ ++FK S + + G SV + + L L +++ L Y S++
Sbjct: 186 IQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQEL----GYEVSVH------- 234
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
L+ ++ + REG +D +LSL+ +MK + YN + + G+ + ++
Sbjct: 235 LFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEI 294
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
K +G+ PD+ +Y I + L + ++ME ++
Sbjct: 295 KSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPC----------------- 337
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
A YN +I Y S G DE QK + Y
Sbjct: 338 --------------------AYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYN 377
Query: 319 TMLGSLVKIGELEEAEKMLEEWE------LSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
+L L K G L EA + EE + LS Y N+++ + G +E A V
Sbjct: 378 CILTCLGKKGRLGEALRTFEEMKKDAAPNLSTY-------NVLIDMLCKAGEVEAAFKVR 430
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHE--ENKFWRPKPSLVSSI 430
+ + G P + +I+ + + KA + + EA ++ E +K P S+
Sbjct: 431 DAMKEAGLFPNVMTVNIMI------DRLCKAKK-LDEACSIFEGMNHKICSPDEVTFCSL 483
Query: 431 LDWLGDNRDVEEVEAFVSSL--KIKVQKRNMYHALTEAHIRSGQEVDG 476
+D LG V++ + K+ +Y +L ++ + G++ DG
Sbjct: 484 IDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDG 531
Score = 45.1 bits (105), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 110/276 (39%), Gaps = 39/276 (14%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L++ V+ G E+ L MKE G YN + + +G+ K +L +MK
Sbjct: 585 YSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMK 644
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN-------- 251
G P +Y I+ L + +E +S + ++ YS++ +
Sbjct: 645 TKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNG-LELNVVIYSSLIDGFGKVGRI 703
Query: 252 ---YYIIAGLKEKAI---IY--------LKKCEDI------------VSKSKDALGYNHL 285
Y I+ L +K + +Y L K E+I + + + + Y+ L
Sbjct: 704 DEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSIL 763
Query: 286 ISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCY 345
I+ + ++ FW + + K Y TM+ L K G + EA + E ++ +
Sbjct: 764 INGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGG 823
Query: 346 CYDFRVPNIIL--LGYSQKGMIEKADAVLKEIVKKG 379
D N I+ L YS++ M +A + +E KG
Sbjct: 824 VPDSASYNAIIEGLSYSRRAM--EAYKIFEETRMKG 857
>gi|388499386|gb|AFK37759.1| unknown [Lotus japonicus]
Length = 500
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 133/306 (43%), Gaps = 7/306 (2%)
Query: 78 QLRSRKRFKHALQVSEW-MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV 136
QLR RK++ + + W + V + + +D G+ + AE+ + L + +
Sbjct: 135 QLRMRKQWDSIISICRWILLRSSFKQDVICYNLLIDAFGQKFLYKEAESTYLQLLEARCI 194
Query: 137 --DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDV 194
+ Y L+ Y GL++++ ++ +MK G SA+ YN + G K ++
Sbjct: 195 PNEDTYALLIKAYCLSGLLEKAEAVFVEMKNYGLPSSAVVYNSYINGLMKGGNPNKAEEI 254
Query: 195 LLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYI 254
L MK +G P +Y + IN YG + V EM S + TY+ + N +
Sbjct: 255 FLRMKRDGCKPSTETYTMLINLYGKDGKSFMALKVFNEMLSH-KCKPNICTYTALVNAFA 313
Query: 255 IAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGL-QKIKCKKQL 313
GL EKA ++ ++ D YN L+ Y+ G + + L Q + C+
Sbjct: 314 REGLCEKAEEVFEQMQE-AGLEPDVYSYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPD- 371
Query: 314 NRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
Y ++ + + G L +AE + E+ + + ++L +S+ G + K + +L
Sbjct: 372 RASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILN 431
Query: 374 EIVKKG 379
++ K G
Sbjct: 432 QMCKSG 437
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 100/239 (41%), Gaps = 49/239 (20%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y AL+N + REGL +++ + ++M+E G +YN +M Y+ G ++ M+
Sbjct: 305 YTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYSYNALMEAYSRAGFPYGAAEIFSLMQ 364
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G PD SY I +++YG L+ E V ++M+ G T+ ++ ++
Sbjct: 365 HMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRV-------GITPTMKSHMVLLSAF 417
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD--- 316
K + KCEDI+++ CK L D
Sbjct: 418 SKT-GNVSKCEDILNQ--------------------------------MCKSGLKLDTFV 444
Query: 317 ---YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
+ + G L + G++EE ++E SC D NI++ Y Q G I+K + +
Sbjct: 445 LNSMLNLYGRLGQFGKMEEVLTVMENG--SCEA-DISTYNILINRYGQAGFIDKMEGLF 500
Score = 41.6 bits (96), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 62/153 (40%), Gaps = 3/153 (1%)
Query: 81 SRKRFKH-ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVD-- 137
SR F + A ++ M G + + +D G+ L AE F +
Sbjct: 348 SRAGFPYGAAEIFSLMQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTM 407
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
K + LL+ + + G V + ++ +M + G N ++ LY GQ K+ +VL
Sbjct: 408 KSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTV 467
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVL 230
M+ D +Y I IN YG + ME +
Sbjct: 468 MENGSCEADISTYNILINRYGQAGFIDKMEGLF 500
>gi|255581238|ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528950|gb|EEF30943.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 737
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 136/304 (44%), Gaps = 40/304 (13%)
Query: 153 VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
++++L +++M+ +G + + YN ++ Y + Q E +++ +M G PPD SY
Sbjct: 222 LEKALRFLERMQLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYT 281
Query: 213 CINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDI 272
+ + + N++++M + + D TY+T+ + G ++A+ +L++ E+
Sbjct: 282 VMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEE- 340
Query: 273 VSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEE 332
D +GY+ +++ + G D + K Y ++ L K+G++EE
Sbjct: 341 RGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEE 400
Query: 333 AEKMLEE-WELSC-------------YCY----------------DFRVPN-----IILL 357
A+KML++ ++ C C D+ PN +++
Sbjct: 401 AKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMH 460
Query: 358 GYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYA--DKNNMEKAF--ECMKEALAV 413
G ++G + +A V++E++ KG PTP +++ K N K F EC+ AV
Sbjct: 461 GLRREGKLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNRGCAV 520
Query: 414 HEEN 417
+ N
Sbjct: 521 NAVN 524
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 144/351 (41%), Gaps = 34/351 (9%)
Query: 135 KVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPD 193
+VDK+ Y A++N + +G +D + ++ +M G + Y ++ G+ E+
Sbjct: 344 QVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKK 403
Query: 194 VLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYY 253
+L M ++G P+ SY +N L N L+ E + DW T + +
Sbjct: 404 MLQQMYKHGCKPNTVSYTALLNG------LCQHGNSLEAREMMNTSEEDWWTPNAITYSV 457
Query: 254 IIAGLKEKAIIYLKKCEDIVSKS------KDALGYNHLISHYASLGNKDEMMKFWGLQKI 307
++ GL+ + L + D+V + + N LI +E KF
Sbjct: 458 VMHGLRREG--KLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFM----- 510
Query: 308 KCKKQLNR-------DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYS 360
++ LNR ++ T++ + ++ A +L++ L+ D I+
Sbjct: 511 --EECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALG 568
Query: 361 QKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFW 420
+KG IE+A +++KKG PTP ++ + Y +E+ + + + L+ +
Sbjct: 569 KKGRIEEATVYTMKMLKKGLDPTPVTYRAVIHQYCKMGRVEELIKLLGKMLSRSK----C 624
Query: 421 RPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNMYHALTEAHIRSG 471
R + V L G+ ++V V ++ N H L E+++ G
Sbjct: 625 RTAYNQVIEKLCNFGNPEAADKVVGLVLRTASRIDA-NTCHMLMESYLSKG 674
>gi|224135699|ref|XP_002322139.1| predicted protein [Populus trichocarpa]
gi|222869135|gb|EEF06266.1| predicted protein [Populus trichocarpa]
Length = 866
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 144/363 (39%), Gaps = 45/363 (12%)
Query: 95 MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGL 152
M+ G+ + + +D GK+ L+ + V ++ Y LL Y R G
Sbjct: 275 MNEGGVVPDITTYTYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGN 334
Query: 153 VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
++++ + + M+E G +A Y+ ++ LY G+++++ ++ L+MK + PD +Y
Sbjct: 335 IEDATGVFRLMQEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNT 394
Query: 213 CINSYGARSELSSM---------ENVLQEMESQSHISMDWG------------------- 244
I+ +G + ENV ME+ + G
Sbjct: 395 LIDVFGEGGYFKEVVTLFHDMAEENVEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKG 454
Query: 245 ------TYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDE- 297
Y+ V Y A + E+A++ L ++ SK YN LI +A G E
Sbjct: 455 MIPSSKAYTGVIEAYGQAAMYEEALVTLNTMNEMGSKPTIET-YNTLIYMFARGGLYKET 513
Query: 298 ---MMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNI 354
++K + + N ++ + G+ EEA K E E S D R
Sbjct: 514 EAILLKMGDFGVARERDSFN----GVIEGFRQGGQFEEAIKAYVEMEKSRLVPDERTLEA 569
Query: 355 ILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVH 414
+L Y G+++++ +EI G P + ++ A YA + +A+E + E L
Sbjct: 570 VLSVYCIAGLVDESVEQFQEIKASGILPNVMCYCMMLAVYAKSDRWNEAYELLDEMLTNR 629
Query: 415 EEN 417
N
Sbjct: 630 ASN 632
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/363 (19%), Positives = 142/363 (39%), Gaps = 46/363 (12%)
Query: 80 RSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL 139
RS + FKH +Q W + H + + + L+G+ LE F + +
Sbjct: 125 RSLRLFKH-MQRQIWCKP-----NEHIYTIMISLLGREGLLEKCSDIFEEMGAHGVSRSV 178
Query: 140 --YGALLNCYVREGLVDESLSLMQKMKE---------------------------MGSFG 170
Y AL+N Y R G + SL L+++MK+ +G F
Sbjct: 179 FSYTALINSYGRNGKYEVSLELLERMKKERVSPSILTYNTVINSCARGGLDWEGLLGLFA 238
Query: 171 SA---------LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARS 221
+ YN ++C +N G ++ V M E GV PD +Y ++++G +
Sbjct: 239 EMRHEGIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVPDITTYTYLVDTFGKLN 298
Query: 222 ELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALG 281
L + +L+EM S ++ + +Y+ + Y G E A + ++ +A
Sbjct: 299 RLDKVSELLKEMASTGNVP-EISSYNVLLEAYARIGNIEDATGVFRLMQE-AGCVPNAET 356
Query: 282 YNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWE 341
Y+ L+ Y G DE+ + + K+ + Y T++ + G +E + +
Sbjct: 357 YSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGEGGYFKEVVTLFHDMA 416
Query: 342 LSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNME 401
+ ++ + G+ + A +L + +KG P+ +++ + Y E
Sbjct: 417 EENVEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGMIPSSKAYTGVIEAYGQAAMYE 476
Query: 402 KAF 404
+A
Sbjct: 477 EAL 479
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
[Arabidopsis lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 1164
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 122/277 (44%), Gaps = 10/277 (3%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ++N Y R G +D+ L++KMK+ G ++ Y I+ L + + + +M
Sbjct: 707 YSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMI 766
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG-- 257
G+ PD Y ++ + R ++ + EM S+ I+ D TY+ + + + G
Sbjct: 767 GQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRD-ITPDVLTYTAIISGFCQIGDM 825
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGN-KDEMMKFWGLQKIKCKKQLNRD 316
++ + + C + D + + L++ Y G+ KD + + C +
Sbjct: 826 VEAGKLFHEMLCRGL---EPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNV-VT 881
Query: 317 YITMLGSLVKIGELEEAEKMLEE-WELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
Y T++ L K G+L+ A ++L E W++ F N I+ G + G IE+A ++ E
Sbjct: 882 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTY-NSIVNGLCKSGNIEEAVKLVGEF 940
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
G +++ + Y M+KA E + E L
Sbjct: 941 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLG 977
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/313 (19%), Positives = 131/313 (41%), Gaps = 4/313 (1%)
Query: 93 EWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDK--LYGALLNCYVRE 150
E M +GL + + + + L+ ++ L AE F+ + + + +Y L++ + +
Sbjct: 728 EKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKR 787
Query: 151 GLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSY 210
G + + +M L Y I+ + G + + +M G+ PD ++
Sbjct: 788 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITF 847
Query: 211 RICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCE 270
+N Y + V M Q+ S + TY+T+ + G + A L +
Sbjct: 848 TELMNGYCKAGHIKDAFRVHNHM-IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 906
Query: 271 DIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGEL 330
I + YN +++ GN +E +K G + Y T++ + K GE+
Sbjct: 907 KI-GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 965
Query: 331 EEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSII 390
++A+++L E N+++ G+ GM+E + +L ++ KG P +++ +
Sbjct: 966 DKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCL 1025
Query: 391 AAGYADKNNMEKA 403
Y +NN++ A
Sbjct: 1026 VKQYCIRNNLKAA 1038
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 138/330 (41%), Gaps = 31/330 (9%)
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
++ + ++ E+G + +YN ++ G+ + +LL M+ G PD SY IN
Sbjct: 653 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVIN 712
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK 275
Y EL + ++++M+ + G Y I GL + I L + E+ S+
Sbjct: 713 GYCRFGELDKVWKLIEKMKQK-------GLKPNSYTYGSIIGLLCR-ICKLAEAEEAFSE 764
Query: 276 S------KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGE 329
D + Y L+ + G+ KF+ + Y ++ +IG+
Sbjct: 765 MIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 824
Query: 330 LEEAEKMLEEWELSCYCYDFRVPNIILL-----GYSQKGMIEKADAVLKEIVKKGKTPTP 384
+ EA K+ E+ C + P+II GY + G I+ A V +++ G +P
Sbjct: 825 MVEAGKLFH--EMLCRGLE---PDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNV 879
Query: 385 NSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVE 444
+++ + G + +++ A E + E + +P +SI++ L + ++EE
Sbjct: 880 VTYTTLIDGLCKEGDLDSANELLHEMWKIG-----LQPNIFTYNSIVNGLCKSGNIEEAV 934
Query: 445 AFVSSLKIKVQKRN--MYHALTEAHIRSGQ 472
V + + Y L +A+ +SG+
Sbjct: 935 KLVGEFEAAGLNADTVTYTTLMDAYCKSGE 964
>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
Length = 1128
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 82/393 (20%), Positives = 165/393 (41%), Gaps = 60/393 (15%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
++ AL + + G+++E+ KMK F + NG++ + G+ + + DM
Sbjct: 65 VFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDM 124
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
G P F+Y I I+ ++ + + +EM+ + I D TY+++ + Y G
Sbjct: 125 IGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIP-DTVTYNSMIDGYGKVGR 183
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFW------GL-------- 304
+ + + ++ + + S D + YN LI+ + G + ++F+ GL
Sbjct: 184 LDDTVYFFEEMKSM-SCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYS 242
Query: 305 -------------QKIKCKKQLNR--------DYITMLGSLVKIGELEEA----EKMLE- 338
Q IK + R Y +++ + KIG L +A +MLE
Sbjct: 243 TLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEV 302
Query: 339 --EWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYAD 396
EW + Y ++ G +++A+ + ++V G P S++ + G+
Sbjct: 303 GVEWNVVTY-------TALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVK 355
Query: 397 KNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQK 456
NM++A E + E + + +P L + + L +E + ++ ++ K
Sbjct: 356 AKNMDRALELLNEL-----KGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIK 410
Query: 457 RN--MYHALTEAHIRSGQEVDG--LLESMKADD 485
N +Y L +A+ +SG +G LLE M+ D
Sbjct: 411 ANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELD 443
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 85/489 (17%), Positives = 196/489 (40%), Gaps = 63/489 (12%)
Query: 43 ISPLGDPDVSLTPVLDQWVLE--GQKISELELQRVIRQLRSRKRFKHAL----------Q 90
+ G D + ++D +LE Q S+++ RV + RS H +
Sbjct: 60 VPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKR 119
Query: 91 VSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYV 148
+ M G G +V + + +D + K +E+A F + + Y ++++ Y
Sbjct: 120 FFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYG 179
Query: 149 REGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNF 208
+ G +D+++ ++MK M + YN ++ + +G+ K + +MK++G+ P+
Sbjct: 180 KVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVV 239
Query: 209 SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYST----------------VANY 252
SY ++++ + +M H+ ++ TY++ +AN
Sbjct: 240 SYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEF-TYTSLVDANCKIGNLSDAFRLANE 298
Query: 253 YIIAGLKEKAIIY------------LKKCEDIVSKSKDA------LGYNHLISHYASLGN 294
+ G++ + Y +K+ E + K A YN LI + N
Sbjct: 299 MLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKN 358
Query: 295 KDEMMKFWGLQKIKCKKQLNRD---YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRV 351
D ++ L ++K + + D Y T + L + ++E A+ ++ E + + + +
Sbjct: 359 MDRALEL--LNELK-GRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLI 415
Query: 352 PNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
++ Y + G + +L+E+ + T ++ ++ G + KA +
Sbjct: 416 YTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRM- 474
Query: 412 AVHEENKF-WRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK--VQKRNMYHALTEAHI 468
N F +P ++ ++++D L V+ + + V R Y +L + ++
Sbjct: 475 ----SNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNL 530
Query: 469 RSGQEVDGL 477
+ G ++ L
Sbjct: 531 KQGNMLEAL 539
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 66/333 (19%), Positives = 143/333 (42%), Gaps = 20/333 (6%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLN 145
A +++ M G+ ++V + +D + ++ AE F + + L Y AL++
Sbjct: 292 AFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIH 351
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
+V+ +D +L L+ ++K G L Y + + E V+ +M+ENG+
Sbjct: 352 GFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKA 411
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
+ Y +++Y + ++L+EM+ H + T+ + + L KAI Y
Sbjct: 412 NTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDH-EVTVVTFCVLIDGLCKNKLVSKAIDY 470
Query: 266 LKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD---YITMLG 322
+ + +A Y +I L ++++ L + ++ L D Y +++
Sbjct: 471 FGRMSNDFGLQPNAAVYTAMID---GLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMD 527
Query: 323 SLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTP 382
+K G + EA + ++ D ++ G+SQ ++KA + L+E++ G+
Sbjct: 528 GNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMI--GEEI 585
Query: 383 TPNSWSIIAAGYADKNNMEKAFE--CMKEALAV 413
P+ I ++K +E C+ EA+ +
Sbjct: 586 LPDEVLCIGV-------LKKHYELGCIDEAVGL 611
>gi|242093812|ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
gi|241915619|gb|EER88763.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
Length = 786
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 150/362 (41%), Gaps = 27/362 (7%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L Y R G +E+ + M G +A YN +M Y N G+ ++ + MK
Sbjct: 317 YNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQMK 376
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHIS--MDWGTYSTVANYYIIAG 257
++G P+ +Y + G +S + M +L EM + W T V +
Sbjct: 377 KSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMED 436
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
+ + +K C V S+D YN LI+ Y G++ K + Y
Sbjct: 437 YVTRVLEGMKSCG--VELSRDT--YNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTY 492
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
+L L + G+ A+ ++ + + + + +++L Y++ G I DA+ KE+
Sbjct: 493 NALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEVY- 551
Query: 378 KGKTPTPNSW----SIIAAGYADK--NNMEKAFECMKEALAVHEENKFWRPKPSLVSSIL 431
G T P SW +++ A + + +EKAF+ +K + + P + +S+L
Sbjct: 552 -GGTVFP-SWVILRTLVIANFKCRRLGGIEKAFQEVKA--------RGYNPDLVIFNSML 601
Query: 432 DWLGDNRDVEEVEAFVSSLKIKVQKRNM--YHALTEAHIRSGQ--EVDGLLESMKADDID 487
N +V S+K ++ Y++L + + + + E + +L +K+ +
Sbjct: 602 SMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQVK 661
Query: 488 ED 489
D
Sbjct: 662 PD 663
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/395 (20%), Positives = 164/395 (41%), Gaps = 55/395 (13%)
Query: 52 SLTPVLDQWVLE-GQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQ 110
++ +LD+ L G ++ V+ L R++ A+++ + QG+A ++ + V
Sbjct: 155 AVCALLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERAVELFAELRRQGVAPTLVTYNVV 214
Query: 111 LDLIGKV----------------RGLE----SAETYFNSLNDEDKVDK------------ 138
LD+ G++ G+E +A T + + VD+
Sbjct: 215 LDVYGRMGRSWPRIVALLDEMRAAGVEPDDFTASTVIAACCRDGLVDEAVAFFEDLKARG 274
Query: 139 ------LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
Y ALL + + G E+L ++++M++ G A+ YN + Y G +E+
Sbjct: 275 HTPCVVTYNALLQVFGKAGNYTEALRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAA 334
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
L M G+ P+ F+Y + +YG ++ + +M+ G V Y
Sbjct: 335 KCLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQMKKS-------GCVPNVNTY 387
Query: 253 YIIAGLKEKAIIYLKKCEDIVSKSKDA-----LGYNHLISHYASLGNKDEMMKFWGLQKI 307
I G+ K + E + S+ + +N +++ G +D + + L+ +
Sbjct: 388 NFILGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRV--LEGM 445
Query: 308 K-CKKQLNRD-YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMI 365
K C +L+RD Y T++ + + G A KM E + + N +L S++G
Sbjct: 446 KSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGDW 505
Query: 366 EKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNM 400
A +++ ++ KG P S+S++ YA N+
Sbjct: 506 STAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNI 540
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 150/343 (43%), Gaps = 20/343 (5%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETY----FNSL 130
++ L + RF L++ MS G + L + GK RG+E T S
Sbjct: 390 ILGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGK-RGMEDYVTRVLEGMKSC 448
Query: 131 NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEK 190
E D Y L+ Y R G + + +M G YN ++ + + G
Sbjct: 449 GVELSRDT-YNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGDWST 507
Query: 191 IPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVA 250
++ M+ G P++ SY + + Y ++ ++ + +E+ + + W T+
Sbjct: 508 AQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGT-VFPSWVILRTL- 565
Query: 251 NYYIIAGLKEKAIIYLKKC-EDIVSK--SKDALGYNHLISHYASLGNKDEMMKFWGLQKI 307
+IA K + + ++K +++ ++ + D + +N ++S YA G ++ + + I
Sbjct: 566 ---VIANFKCRRLGGIEKAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIF--DSI 620
Query: 308 KCKKQLNRDYIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGM 364
K + L+ D IT ++ K E EAEK+L + + S D N ++ G+ ++G+
Sbjct: 621 K-QSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYNTVINGFCKQGL 679
Query: 365 IEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECM 407
I++A +L E++ G P ++ + GYA +A E +
Sbjct: 680 IKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFSEAREVI 722
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 118/259 (45%), Gaps = 3/259 (1%)
Query: 147 YVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPD 206
++R GL + KM+E G +A +YNG++ L +G + ++ M G+ P
Sbjct: 170 FIRGGLRQTPFAF-GKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPS 228
Query: 207 NFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYL 266
++ + + G R + +++++L+EMES + + TY+ AG ++A +
Sbjct: 229 LKTFSALMVATGKRRDTETVKSLLEEMESLG-LKPNIYTYTICIRVLGRAGRIDEACRIM 287
Query: 267 KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVK 326
K+ ED D + Y LI + G D+ M+ + K K YITML
Sbjct: 288 KRMEDD-GCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSD 346
Query: 327 IGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNS 386
G+L ++ E E Y D I++ + G I++A +L + K+G P ++
Sbjct: 347 CGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHT 406
Query: 387 WSIIAAGYADKNNMEKAFE 405
++ + +G N ++ A +
Sbjct: 407 YNTLISGLLRVNRLDDALD 425
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 157/364 (43%), Gaps = 23/364 (6%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALL--N 145
A + + M QG+ ++H + + + +V L+ A FN++ V Y +L +
Sbjct: 388 AFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFID 447
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
Y + G D++L +KMK G + + N + G+ + + +K NG+ P
Sbjct: 448 FYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAP 507
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
D+ +Y + + Y ++ +L +M S++ D +++ N AG ++A
Sbjct: 508 DSVTYNMMMKCYSKAGQVDEAIELLSDM-SENQCEPDIIVINSLINTLYKAGRVDEAWKM 566
Query: 266 LKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMK-FWGLQKIKCKKQLNRDYITMLGSL 324
+ +D+ + + YN LI+ G M+ F + C + T+L L
Sbjct: 567 FCRLKDM-KLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPN-TITFNTILDCL 624
Query: 325 VKIGELEEAEKMLEEW-ELSCYCYDFRVPNIILLGYSQKGM-IEK--ADAV-LKEIVKKG 379
K E++ A KML + ++C +P+++ G+ IEK +DA+ L +KK
Sbjct: 625 CKNDEVDLALKMLYKMTTMNC------MPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKM 678
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFECMKE---ALAVHEENKFWRPKPSLVSSILDWLGD 436
TP + + G ME AF+ ++ L V+ + +FW L+ IL G
Sbjct: 679 LTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWE---DLMGGILTQAGT 735
Query: 437 NRDV 440
+ +
Sbjct: 736 EKTI 739
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 117/269 (43%), Gaps = 43/269 (15%)
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
C ++ LV +S+ ++ KE+G + +YN ++ + E ++ +MK G P
Sbjct: 765 CKHKQALVAQSV-FIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAP 823
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
D F+Y + ++++G +++ + + ++M S +T+ + IIA L
Sbjct: 824 DVFTYNLLLDAHGKSGKINELFELYEQMICSSCKP------NTITHNIIIANL------- 870
Query: 266 LKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLV 325
+ S S D + + L + D C Y +L L+
Sbjct: 871 ------VKSNSLD-----KALDLFYDLVSGD-------FSPTPCT------YGPLLDGLL 906
Query: 326 KIGELEEAEKMLEEW-ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTP 384
K G LEEA+++ EE + C + + NI++ G+ + G + A + K +V++G P
Sbjct: 907 KSGRLEEAKELFEEMVDYGCRPNN-AIYNILINGFGKTGDVNTACELFKRMVREGIRPDL 965
Query: 385 NSWSIIAAGYADKNNMEKA---FECMKEA 410
S++ + + ++ A FE +K+
Sbjct: 966 KSYTSLVGCLCEAGRVDDALHYFEKLKQT 994
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 62/320 (19%), Positives = 126/320 (39%), Gaps = 39/320 (12%)
Query: 95 MSGQGLAFSVHDHAVQLDLIGKVRGL-ESAETYFNSLNDEDKVDKL-YGALLNCYVREGL 152
M G A V + + LD GK + E E Y + K + + + ++ V+
Sbjct: 816 MKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNS 875
Query: 153 VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
+D++L L + + Y ++ +G+ E+ ++ +M + G P+N Y I
Sbjct: 876 LDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNI 935
Query: 213 CINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDI 272
IN +G ++++ + + M + I D +Y+++ AG + A+ Y +K +
Sbjct: 936 LINGFGKTGDVNTACELFKRMVREG-IRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQ- 993
Query: 273 VSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEE 332
D++ YN +I L R + +EE
Sbjct: 994 TGLYLDSIAYNLMID------------------------GLGRSH-----------RIEE 1018
Query: 333 AEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAA 392
A + +E + D N ++L GM+E+A + +E+ G P +++ +
Sbjct: 1019 ALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIR 1078
Query: 393 GYADKNNMEKAFECMKEALA 412
GY+ N + A+ K +
Sbjct: 1079 GYSMSGNSDSAYAVYKRMMV 1098
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 84/190 (44%), Gaps = 9/190 (4%)
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YG 141
R + A ++ E M G + + + ++ GK + +A F + E L Y
Sbjct: 910 RLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYT 969
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL---DM 198
+L+ C G VD++L +K+K+ G + ++ YN + G+ +I + L +M
Sbjct: 970 SLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYN---LMIDGLGRSHRIEEALTLYDEM 1026
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
+ G+ PD F+Y I + G + + +E++ + + TY+ + Y ++G
Sbjct: 1027 QSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIG-LEPNVFTYNALIRGYSMSGN 1085
Query: 259 KEKAIIYLKK 268
+ A K+
Sbjct: 1086 SDSAYAVYKR 1095
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 58/329 (17%), Positives = 132/329 (40%), Gaps = 42/329 (12%)
Query: 158 SLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSY 217
SL+++M+ +G + Y + + G+ ++ ++ M+++G PD +Y + I++
Sbjct: 250 SLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDAL 309
Query: 218 GARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSK 277
+L + +M++ SH D TY T+ + + G + + + E +
Sbjct: 310 CTAGKLDDAMELFVKMKASSH-KPDRVTYITMLDKFSDCGDLGRVKEFWSEME-ADGYAP 367
Query: 278 DALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKML 337
D + + L++ GN DE + + + Y T++ L+++ L++A +
Sbjct: 368 DVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLF 427
Query: 338 EEWEL-----SCYCY----DFR---------------------VPNII-----LLGYSQK 362
E + Y Y DF PNI+ L ++
Sbjct: 428 NNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEM 487
Query: 363 GMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRP 422
G + +A + + G P +++++ Y+ +++A E + + EN+ P
Sbjct: 488 GRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDM----SENQ-CEP 542
Query: 423 KPSLVSSILDWLGDNRDVEEVEAFVSSLK 451
+++S+++ L V+E LK
Sbjct: 543 DIIVINSLINTLYKAGRVDEAWKMFCRLK 571
>gi|302768589|ref|XP_002967714.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
gi|300164452|gb|EFJ31061.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
Length = 384
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 117/265 (44%), Gaps = 10/265 (3%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y AL+ Y R+GL E+L L +M +G YN + +Y G E + +L +M
Sbjct: 126 YNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMD 185
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
GVPPD +Y ++ Y +S +L+EM + W TY N + + K
Sbjct: 186 TKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIW-TY----NIMLSSARK 240
Query: 260 EKAIIYLKKC-EDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWG-LQKIKCKKQLNR 315
E+++ + E++ SK + + Y+ ++S Y G E K W + + C +
Sbjct: 241 EQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIA 300
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
Y ++ S G +EA ++ S D ++ ++ Y + G +A+ + E+
Sbjct: 301 -YSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEM 359
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNM 400
K+G P ++ I+ +A+ +
Sbjct: 360 TKEGFVPDGITYGILVRAFANAGRL 384
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 112/257 (43%), Gaps = 3/257 (1%)
Query: 140 YGALLNCYVRE-GLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
Y +++ Y+R+ +D +L L++ MKE G + YN ++ N+G+ E +L DM
Sbjct: 20 YTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAAEKILDDM 79
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
K + V + +Y I Y L + QEM+ + W TY+ + Y GL
Sbjct: 80 KRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGESPNSW-TYNALIQGYGRKGL 138
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
++A + L D V +KD YN I+ Y G ++M + K Y
Sbjct: 139 FKEA-LELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYN 197
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
T+L K +A ++L E + Y + NI+L ++ + +A + + + K
Sbjct: 198 TLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSK 257
Query: 379 GKTPTPNSWSIIAAGYA 395
G P ++S + + Y
Sbjct: 258 GVVPNIVTYSAMLSLYG 274
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 131/310 (42%), Gaps = 43/310 (13%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+YG L+ YV+E + ++ L++ M G YN ++ + E+ +L+DM
Sbjct: 488 MYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDM 547
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHIS------------MDWGTY 246
E G+ P+ +Y IN Y E+ E ++M S + D G
Sbjct: 548 GEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVG-- 605
Query: 247 STVANYYIIAGLKEKAIIY-LKKCEDIV------SKSKDALG----------------YN 283
+TV + EK +I ++ I+ K+K+A+G YN
Sbjct: 606 NTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYN 665
Query: 284 HLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD---YITMLGSLVKIGELEEAEKMLEEW 340
LIS + G+ ++ + + +N + Y T++ L K+GE+ +A ++ +E
Sbjct: 666 SLISGFCKEGDIEKASQLYDEM---LHNGINPNIVVYNTLINGLCKLGEVTKARELFDEI 722
Query: 341 ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNM 400
E D + I+ GY + G + +A + E++ KG +P + I+ G + N+
Sbjct: 723 EEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNL 782
Query: 401 EKAFECMKEA 410
EKA EA
Sbjct: 783 EKALSLFHEA 792
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 173/400 (43%), Gaps = 35/400 (8%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE--DKVDKLYGALLN 145
AL+V + M +GL H + + +D K + + A+ F S+ + Y AL++
Sbjct: 295 ALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALID 354
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
+++EG ++E+L + +M G + + YN ++ G+ K + +M G+ P
Sbjct: 355 GFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEP 414
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
D ++Y + I+ Y +++ +L EM+++ + TYS +I+GL +
Sbjct: 415 DTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPF-TYSV-----LISGLCHSS--D 466
Query: 266 LKKCEDIVSK------SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD--- 316
L+K +++ + + Y LI Y + ++ L KI + D
Sbjct: 467 LQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIE---LLKIMIANGVLPDLFC 523
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y ++ L + ++EEA+ +L + + + YS+ G I+ A+ K+++
Sbjct: 524 YNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDML 583
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKA---FECMKEALAVHEENKFWRPKPSLVSSILDW 433
G P ++I+ G+ D N +A F+CM E K P S+I+
Sbjct: 584 SSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLE--------KGLIPDIRAYSAIIHS 635
Query: 434 LGDN-RDVEEVEAFVSSLKIK-VQKRNMYHALTEAHIRSG 471
L N + E + F+ LK V +Y++L + G
Sbjct: 636 LSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEG 675
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 149/367 (40%), Gaps = 26/367 (7%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I L K+ + A + M +G+ + H + ++L K ++ AE YF +
Sbjct: 527 LIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSG 586
Query: 135 KV--DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
V + +Y L+ + G E+LS + M E G Y+ I+ + G+ ++
Sbjct: 587 IVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAM 646
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
V L + GV PD F Y I+ + ++ + EM + I+ + Y+T+ N
Sbjct: 647 GVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEM-LHNGINPNIVVYNTLING 705
Query: 253 YIIAGLKEKAIIYLKKCE--DIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCK 310
G KA + E D+V D + Y+ +I Y GN E K + K
Sbjct: 706 LCKLGEVTKARELFDEIEEKDLVP---DVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGI 762
Query: 311 KQLNRDYITMLGSLVKIGELEEAEKMLEEWE------LSCYCYDFRVPNIILLGYSQKGM 364
Y ++ K G LE+A + E + LS + N ++ + + G
Sbjct: 763 SPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAF-------NSLIDSFCKHGK 815
Query: 365 IEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKP 424
+ +A + ++V K TP +++I+ Y ME+A E L + E + P
Sbjct: 816 VIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEA-----EQLFLDMETRNIIPNT 870
Query: 425 SLVSSIL 431
+S+L
Sbjct: 871 LTYTSLL 877
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 118/274 (43%), Gaps = 7/274 (2%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
+ Y A+++ + G E++ + K + G YN ++ + G EK + +
Sbjct: 627 RAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDE 686
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
M NG+ P+ Y IN E++ + E+E + + D TYST+ + Y +G
Sbjct: 687 MLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVP-DVVTYSTIIDGYCKSG 745
Query: 258 LKEKAIIYLKKCEDIVSK--SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR 315
+A K ++++SK S D Y LI GN ++ + + + K L+
Sbjct: 746 NLTEA---FKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSA 802
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
+ +++ S K G++ EA ++ ++ + I++ Y + M+E+A+ + ++
Sbjct: 803 -FNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDM 861
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
+ P +++ + Y N K K+
Sbjct: 862 ETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKD 895
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 116/250 (46%), Gaps = 3/250 (1%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+Y L++ +EG ++++LSL + ++ S GS +N ++ + G+ + ++ DM
Sbjct: 768 IYCILIDGCGKEGNLEKALSLFHEAQQ-KSVGSLSAFNSLIDSFCKHGKVIEARELFDDM 826
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
+ + P+ +Y I I++YG + E + +ME+++ I + TY+++ Y G
Sbjct: 827 VDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIP-NTLTYTSLLLSYNQIGN 885
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
+ K I K E + DA+ Y + S Y G E +K ++ K + +
Sbjct: 886 RFKMISLFKDME-ARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFD 944
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
++ L K ++ ++L E + N +LLG+ + G ++A VL + +
Sbjct: 945 ALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRL 1004
Query: 379 GKTPTPNSWS 388
G PT S +
Sbjct: 1005 GWVPTSLSLT 1014
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 86/390 (22%), Positives = 152/390 (38%), Gaps = 56/390 (14%)
Query: 86 KHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNS--LNDEDKVDKLYGAL 143
+ AL++ + M +GL +V + + I K + A + FN + + Y L
Sbjct: 363 EEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLL 422
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
++ Y++ + ++ L+ +MK S Y+ ++ ++ +K +VL M NGV
Sbjct: 423 IDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGV 482
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEM-------------------------ESQSH 238
P+ F Y I +Y S +L+ M E
Sbjct: 483 KPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKM 542
Query: 239 ISMDWG---------TYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS--KDALGYNHLIS 287
+ +D G TY N Y +G + A Y K D++S + + Y LI
Sbjct: 543 LLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFK---DMLSSGIVPNNVIYTILIK 599
Query: 288 HYASLGNKDEMMKFWGLQKIKCKKQLN-----RDYITMLGSLVKIGELEEAEKMLEEWEL 342
+ +GN E L KC + R Y ++ SL K G+ +EA + ++
Sbjct: 600 GHCDVGNTVE-----ALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLK 654
Query: 343 SCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEK 402
+ D + N ++ G+ ++G IEKA + E++ G P ++ + G + K
Sbjct: 655 TGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTK 714
Query: 403 AFECMKEALAVHEENKFWRPKPSLVSSILD 432
A E E E K P S+I+D
Sbjct: 715 ARELFDEI-----EEKDLVPDVVTYSTIID 739
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 105/240 (43%), Gaps = 39/240 (16%)
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQE 232
YN + TG ++ +V M E G+ PD +Y + ++ + + + + +
Sbjct: 277 FTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFES 336
Query: 233 MESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASL 292
M S S ++ + TY+ + + +I G E+A L
Sbjct: 337 MPS-SGLNPNRFTYTALIDGFIKEGNIEEA-----------------------------L 366
Query: 293 GNKDEMMKFWGLQKIKCKKQLNR-DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRV 351
KDEM+ GL+ LN Y M+G + K GE+ +A + E ++ D
Sbjct: 367 RIKDEMIT-RGLK-------LNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWT 418
Query: 352 PNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
N+++ GY + + KA +L E+ + TP+P ++S++ +G ++++KA E + + +
Sbjct: 419 YNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMI 478
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 67/347 (19%), Positives = 136/347 (39%), Gaps = 23/347 (6%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y A + + G VDE+L + + M E G Y ++ + + ++ + M
Sbjct: 279 YNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMP 338
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+G+ P+ F+Y I+ + + + EM ++ + ++ TY+ + AG
Sbjct: 339 SSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRG-LKLNVVTYNAMIGGIAKAGEM 397
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR--DY 317
KA+ + + D YN LI Y L + D L ++K +K Y
Sbjct: 398 AKAMSLFNEML-MAGLEPDTWTYNLLIDGY--LKSHDMAKACELLAEMKARKLTPSPFTY 454
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLG-----YSQKGMIEKADAVL 372
++ L +L++A ++L++ + PN+ + G Y Q+ E A +L
Sbjct: 455 SVLISGLCHSSDLQKANEVLDQM-----IRNGVKPNVFMYGTLIKAYVQESRYEMAIELL 509
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILD 432
K ++ G P ++ + G +E+A + L V K +P + ++
Sbjct: 510 KIMIANGVLPDLFCYNCLIIGLCRAKKVEEA-----KMLLVDMGEKGIKPNAHTYGAFIN 564
Query: 433 WLGDNRDVEEVEAFVSSLKIK--VQKRNMYHALTEAHIRSGQEVDGL 477
+ +++ E + + V +Y L + H G V+ L
Sbjct: 565 LYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEAL 611
>gi|302761794|ref|XP_002964319.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
gi|300168048|gb|EFJ34652.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
Length = 384
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 117/265 (44%), Gaps = 10/265 (3%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y AL+ Y R+GL E+L L +M +G YN + +Y G E + +L +M
Sbjct: 126 YNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMD 185
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
GVPPD +Y ++ Y +S +L+EM + W TY N + + K
Sbjct: 186 TKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIW-TY----NIMLSSARK 240
Query: 260 EKAIIYLKKC-EDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWG-LQKIKCKKQLNR 315
E+++ + E++ SK + + Y+ ++S Y G E K W + + C +
Sbjct: 241 EQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIA 300
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
Y ++ S G +EA ++ S D ++ ++ Y + G +A+ + E+
Sbjct: 301 -YSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEM 359
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNM 400
K+G P ++ I+ +A+ +
Sbjct: 360 TKEGFVPDGITYGILVRAFANAGRL 384
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 113/257 (43%), Gaps = 3/257 (1%)
Query: 140 YGALLNCYVRE-GLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
Y +++ Y+R+ +D +L L++ MKE G + YN ++ N+G+ E +L DM
Sbjct: 20 YTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAAEKILDDM 79
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
K++ V + +Y I Y L + QEM+ + W TY+ + Y GL
Sbjct: 80 KQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGESPNSW-TYNALIQGYGRKGL 138
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
++A + L D V +KD YN I+ Y G ++M + K Y
Sbjct: 139 FKEA-LELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYN 197
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
T+L K +A ++L E + Y + NI+L ++ + +A + + + K
Sbjct: 198 TLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSK 257
Query: 379 GKTPTPNSWSIIAAGYA 395
G P ++S + + Y
Sbjct: 258 GVVPNIVTYSAMLSLYG 274
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 89/412 (21%), Positives = 178/412 (43%), Gaps = 36/412 (8%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSL--NDEDKVDKLYGALLN 145
++ +SE +G+ + ++ L+ + K +E AE N V + ++N
Sbjct: 341 SITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVN 400
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
Y + G ++++ + ++KM+ +G + + YN ++ + E+ + M E GV P
Sbjct: 401 GYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLP 460
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYII-AGLKEKAII 264
+ +Y I+ YG +L+EME + + + +Y + N A + E +I
Sbjct: 461 NVETYNTLIDGYGRSCLFDRCFQILEEMEKKG-LKPNVISYGCLINCLCKDANILEAEVI 519
Query: 265 YLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLG 322
D+V + +A YN LI G + +F+ + Y ++
Sbjct: 520 L----GDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILIN 575
Query: 323 SLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTP 382
L K G++ EAE + E +D N ++ GYS G ++KA + + + K G P
Sbjct: 576 GLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKP 635
Query: 383 TPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWR--------PKPSLVSSILDWL 434
T N++ + AG C KE L + E K ++ P + ++++
Sbjct: 636 TLNTYHRLIAG------------CGKEGLVLVE--KIYQEMLQMNLVPDRVIYNALIHCY 681
Query: 435 GDNRDVEEVEAFVSSLKIK-VQKRNM-YHALTEAHIRSGQ--EVDGLLESMK 482
++ DV++ + S+++ + +Q M Y+ L H + G+ +V L+ MK
Sbjct: 682 VEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMK 733
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 118/263 (44%), Gaps = 8/263 (3%)
Query: 152 LVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYR 211
+V ES L MK+ G S + N + +T ++E + ++ E+G+ PD F Y
Sbjct: 127 MVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYG 186
Query: 212 ICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCED 271
I A +L ++ ++ M + G + V N I KEK + +K D
Sbjct: 187 KAIQ---AAVKLGDLKRAIELMTCMKRGGVSPGVF--VYNVVIGGLCKEKRMKDAEKLFD 241
Query: 272 IVSKSKDA---LGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIG 328
+ + A + YN LI Y +G +E K++ + + ++L L +
Sbjct: 242 EMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQ 301
Query: 329 ELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWS 388
+EEA+++LEE E+ + D + G+ + G ++ + + +E V+KG + S
Sbjct: 302 MMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCS 361
Query: 389 IIAAGYADKNNMEKAFECMKEAL 411
I+ + NMEKA E +K+ L
Sbjct: 362 ILLNALCKEGNMEKAEEVLKKFL 384
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 144/328 (43%), Gaps = 21/328 (6%)
Query: 85 FKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDK--LYGA 142
K A+++ M G++ V + V + + K + ++ AE F+ + D Y
Sbjct: 198 LKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNT 257
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
L++ Y + G ++E+ ++ ++MK + + +N ++ E+ VL +M+ G
Sbjct: 258 LIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYG 317
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
PD F+Y + + + + + +E + +D+ T S + N G EKA
Sbjct: 318 FVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDY-TCSILLNALCKEGNMEKA 376
Query: 263 IIYLKKCEDIVSKSKDALG--YNHLISHYASLGNKD------EMMKFWGLQKIKCKKQLN 314
LKK + +G +N +++ Y +G+ + E M+ GL + +
Sbjct: 377 EEVLKK---FLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGL------RPNH 427
Query: 315 RDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
Y +++ ++ +EEAEK +++ + N ++ GY + + ++ +L+E
Sbjct: 428 VTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEE 487
Query: 375 IVKKGKTPTPNSW-SIIAAGYADKNNME 401
+ KKG P S+ +I D N +E
Sbjct: 488 MEKKGLKPNVISYGCLINCLCKDANILE 515
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 67/142 (47%), Gaps = 3/142 (2%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I S + AL++ E M G+ +++ + + GK GL E + + +
Sbjct: 608 LISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGK-EGLVLVEKIYQEMLQMN 666
Query: 135 KVDK--LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
V +Y AL++CYV G V ++ SL M+ G + YN ++ + G+ K+
Sbjct: 667 LVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVK 726
Query: 193 DVLLDMKENGVPPDNFSYRICI 214
+++ DMK G+ P +Y I I
Sbjct: 727 NLVNDMKIRGLIPKTETYDILI 748
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/352 (19%), Positives = 150/352 (42%), Gaps = 7/352 (1%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
VLD+ +G + + +I + R A Q+ +S G + L +
Sbjct: 194 VLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLC 253
Query: 116 KVRGLESAETYFNSLNDEDKV--DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
+ E E F + + + V + + L+ + R G+V+ ++ ++ +M E G +
Sbjct: 254 AAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTT 313
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
N ++ G+ + + L +M G PD SY + + +L EM
Sbjct: 314 LCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEM 373
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLG 293
+ + + T++T GL ++AI+ +++ + S + YN L++ + G
Sbjct: 374 -VRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEY-GCSVGIVTYNALVNGFCVQG 431
Query: 294 NKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPN 353
D ++ + + C+ Y T+L L L+ A ++L E + + N
Sbjct: 432 RVDSALELF--NSLPCEPN-TITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFN 488
Query: 354 IILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
+++ + QKG +E+A +++++++ G TP +++ + G + N E+A E
Sbjct: 489 VLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALE 540
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/271 (19%), Positives = 115/271 (42%), Gaps = 12/271 (4%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPD---VLL 196
Y LL + +++ ++ +M+ G + + YN I+ + +++ D +L
Sbjct: 175 YTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVII---NGMCREDRVDDARQILN 231
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
+ G PD SY + A +E + EM + + + T+ + ++
Sbjct: 232 RLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEV-TFDMLVRFFCRG 290
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFW-GLQKIKCKKQLNR 315
G+ E+AI L + + + L N +I+ G D+ +F + C
Sbjct: 291 GMVERAIEVLDRMSEHGCTANTTL-CNIVINSICKQGRVDDAFEFLNNMGSYGCSPD-TI 348
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVP-NIILLGYSQKGMIEKADAVLKE 374
Y T+L L + G E+A+++L E C V N + QKG+I++A ++++
Sbjct: 349 SYTTVLKGLCRAGRWEDAKELLNEMVRK-NCPPNEVTFNTFICILCQKGLIDQAILLIEQ 407
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
+ + G + +++ + G+ + ++ A E
Sbjct: 408 MPEYGCSVGIVTYNALVNGFCVQGRVDSALE 438
>gi|449469755|ref|XP_004152584.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Cucumis sativus]
Length = 708
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 156/363 (42%), Gaps = 45/363 (12%)
Query: 83 KRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKV-RGLESAETYFNSLNDEDK--VDKL 139
KR+ A +V E M + ++ + ++ K+ R + + YF +N + ++
Sbjct: 272 KRYDDACKVYEAMETNNVNPDHVTCSIMITVMRKIGRSAKDSWDYFEKMNQKGVKWSSEV 331
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
GAL+ + EGL ++L L +M++ G + + YN IM ++ + Q E+ V +MK
Sbjct: 332 LGALIKSFCDEGLKSQALILQLEMEKKGVASNVIMYNTIMDAFSKSNQIEEAEGVFAEMK 391
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEME------------------------- 234
GV P + S+ I +N+Y R + +E +L EM+
Sbjct: 392 SKGVKPTSASFNILMNAYSRRMQPEIVEKLLVEMKDMGLEPNVKSYTCLISAYGRQKKMS 451
Query: 235 ----------SQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS-KDAL-GY 282
++ I +Y+ + + Y ++G EKA E+++ + K ++ Y
Sbjct: 452 DMAADAFLRMKKNGIRPTSHSYTALIHAYSVSGWHEKAYSAF---ENMLREGLKPSIETY 508
Query: 283 NHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR-DYITMLGSLVKIGELEEAEKMLEEWE 341
L+ + G+ +MK W L I+ K R + T+L K G EA ++ E++
Sbjct: 509 TTLLDAFRRAGDTVSLMKIWKLM-IREKVLGTRVTFNTLLDGFAKHGHYVEARDVISEFD 567
Query: 342 LSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNME 401
N+++ Y++ G K +L+E+ + P ++S + + + +
Sbjct: 568 KIGLQPTVMTYNMLMNAYARGGQHLKLPQLLQEMAARDLKPDSVTYSTMIYAFVRVRDFK 627
Query: 402 KAF 404
+AF
Sbjct: 628 RAF 630
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 90/223 (40%), Gaps = 22/223 (9%)
Query: 17 TKTNLEIFTRAY-RAVKPVARNNLYSRISPLG-DPDVSLTPVLDQWVLEGQKISELELQR 74
T + I AY R ++P L + +G +P+V L +K+S++
Sbjct: 398 TSASFNILMNAYSRRMQPEIVEKLLVEMKDMGLEPNVKSYTCLISAYGRQKKMSDMAADA 457
Query: 75 VIRQLRSRKR--------FKHALQVSEW----------MSGQGLAFSVHDHAVQLDLIGK 116
+R ++ R HA VS W M +GL S+ + LD +
Sbjct: 458 FLRMKKNGIRPTSHSYTALIHAYSVSGWHEKAYSAFENMLREGLKPSIETYTTLLDAFRR 517
Query: 117 VRGLESAETYFNSLNDEDKVDK--LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALN 174
S + + E + + LL+ + + G E+ ++ + ++G + +
Sbjct: 518 AGDTVSLMKIWKLMIREKVLGTRVTFNTLLDGFAKHGHYVEARDVISEFDKIGLQPTVMT 577
Query: 175 YNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSY 217
YN +M Y GQH K+P +L +M + PD+ +Y I ++
Sbjct: 578 YNMLMNAYARGGQHLKLPQLLQEMAARDLKPDSVTYSTMIYAF 620
>gi|255660938|gb|ACU25638.1| pentatricopeptide repeat-containing protein [Citharexylum
montevidense]
Length = 481
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 92/424 (21%), Positives = 176/424 (41%), Gaps = 35/424 (8%)
Query: 79 LRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAETYFNSLN------ 131
L K+ +HALQ W+ L + H ++++G+ L A +
Sbjct: 19 LHGAKKSEHALQFFRWVZRSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLQW 78
Query: 132 DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
DED L+ +++ Y + G+V ES+ L KM+E+G + +Y+ + + G++
Sbjct: 79 DED----LWVLMIDSYGKAGIVQESVKLFHKMEELGVERTIKSYDVLFKVILRRGRYMMA 134
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
M G+ P ++ I I + ++ + ++M+S+ I+ D TY+T+ N
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNIMIWGFFLSGKVETAXRFFEDMKSRD-ITPDVITYNTMIN 193
Query: 252 -YYIIAGLKEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
YY + ++E +++ K +I + + LI Y ++ D+ ++ K
Sbjct: 194 GYYRVKKMEEAEKYFVEMKGRNI---EPTVVTHTTLIKGYVAVDRVDDALRLVEEMKGFG 250
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL----GYSQKGMI 365
K Y T L L ++ EA L+E Y N I L G + G +
Sbjct: 251 IKPNAITYSTXLPGLCNAEKMSEARSXLKEM---VDKYIAPTDNSIFLRLISGQCKAGNL 307
Query: 366 EKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPK-- 423
+ A VLK +++ + ++ Y +KA + + + E++ RP+
Sbjct: 308 DAAADVLKAMIRLSVPTEAGHYGVLIENYCKAVQYDKAISLLDKLI---EKDIILRPQST 364
Query: 424 ----PSLVSSILDWLGDNRDVEEVEAFVSSL-KIKVQKRNMYHALTEAHIRSGQEVDGLL 478
PS + ++++L +N + E V L K+ VQ + L H + G D
Sbjct: 365 SHMEPSAYNPLIEYLCNNGQTAKAETLVRQLMKLGVQDATALNTLIRGHSQEGSP-DSAF 423
Query: 479 ESMK 482
E +K
Sbjct: 424 ELLK 427
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 123/294 (41%), Gaps = 49/294 (16%)
Query: 116 KVRGLESAETYFNSL---NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
+V+ +E AE YF + N E V + L+ YV VD++L L+++MK G +A
Sbjct: 197 RVKKMEEAEKYFVEMKGRNIEPTV-VTHTTLIKGYVAVDRVDDALRLVEEMKGFGIKPNA 255
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP-DNFSYRICINSYGARSELSSMENVLQ 231
+ Y+ + N + + L +M + + P DN + I+ L + +VL+
Sbjct: 256 ITYSTXLPGLCNAEKMSEARSXLKEMVDKYIAPTDNSIFLRLISGQCKAGNLDAAADVLK 315
Query: 232 EMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC--EDIVSKSK-----DALGYNH 284
M S + + G Y + Y A +KAI L K +DI+ + + + YN
Sbjct: 316 AMIRLS-VPTEAGHYGVLIENYCKAVQYDKAISLLDKLIEKDIILRPQSTSHMEPSAYNP 374
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSC 344
LI + + G Q K + T++ L+K+G
Sbjct: 375 LIEYLCNNG-----------QTAKAE--------TLVRQLMKLG---------------- 399
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKN 398
D N ++ G+SQ+G + A +LK ++++ ++++ + Y K+
Sbjct: 400 -VQDATALNTLIRGHSQEGSPDSAFELLKIMLRRKXDSEKSAYNSLVQCYLKKS 452
>gi|297737955|emb|CBI27156.3| unnamed protein product [Vitis vinifera]
Length = 625
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 154/362 (42%), Gaps = 21/362 (5%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLES----AETYFNSL 130
V QLR K++ + + W+ + S H + +L+ G +S AE+ + L
Sbjct: 176 VAVQLRLNKQWDAIVLICGWILYRS---SFHPDVICYNLLIDAYGQKSLYKKAESTYLEL 232
Query: 131 NDEDKV--DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQH 188
+ V + Y LL Y GL++++ ++ +M++ G SA+ YN + G
Sbjct: 233 LEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDT 292
Query: 189 EKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYST 248
+K ++ MK + P +Y + IN YG S+ V EM SQ + T++
Sbjct: 293 QKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQK-CKPNICTFTA 351
Query: 249 VANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGL-QKI 307
+ N + GL EKA ++ ++ D YN L+ Y+ G + + L Q +
Sbjct: 352 LVNAFAREGLCEKAEEIFEQLQE-AGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHM 410
Query: 308 KCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEK 367
C+ Y M+ + + G E+A+ + E + + ++L YS+ G + K
Sbjct: 411 GCEPD-RASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAK 469
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLV 427
+ ++ ++ K G P + + Y EK M+E L E+ P P+ +
Sbjct: 470 CEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEK----MEEVLTAMEKG----PYPADI 521
Query: 428 SS 429
S+
Sbjct: 522 ST 523
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/329 (19%), Positives = 135/329 (41%), Gaps = 41/329 (12%)
Query: 86 KHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGAL 143
+ A+++ E M S + + ++L GK A F+ + + + + AL
Sbjct: 293 QKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTAL 352
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
+N + REGL +++ + ++++E G YN +M Y+ G ++ M+ G
Sbjct: 353 VNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGC 412
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAI 263
PD SY I +++YG R+ L + E+ + I+ ++ + + Y AG
Sbjct: 413 EPDRASYNIMVDAYG-RAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAG------ 465
Query: 264 IYLKKCEDIVSK-SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLG 322
+ KCE+IV++ K + + + + M+ +G
Sbjct: 466 -KVAKCEEIVNQMHKSGIKPDTFV--------LNSMLNLYG------------------- 497
Query: 323 SLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTP 382
++G+ E+ E++L E Y D NI++ Y + G + + + + + + P
Sbjct: 498 ---RLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIP 554
Query: 383 TPNSWSIIAAGYADKNNMEKAFECMKEAL 411
+W+ Y+ + + E +E +
Sbjct: 555 DVVTWTSRIGAYSRRKQYNRCLEVFEEMI 583
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 77/181 (42%), Gaps = 9/181 (4%)
Query: 81 SRKRFKH-ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLN--DEDKVD 137
SR F + A ++ M G + + +D G+ E A+ F +
Sbjct: 392 SRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTM 451
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
K + LL+ Y R G V + ++ +M + G N ++ LY GQ EK+ +VL
Sbjct: 452 KSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTA 511
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHIS--MDW----GTYSTVAN 251
M++ P D +Y I IN YG + ME + + + +++ I + W G YS
Sbjct: 512 MEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQ 571
Query: 252 Y 252
Y
Sbjct: 572 Y 572
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 85/400 (21%), Positives = 172/400 (43%), Gaps = 16/400 (4%)
Query: 82 RKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL-- 139
+K+F A ++ WM GQG + V + ++ + K + A F+ + + +
Sbjct: 137 KKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVAC 196
Query: 140 YGALLNCYVREGLVDESLSLMQK-MKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
Y L++ + ++G + + + ++ +K + + +YN ++ G+ ++ ++ M
Sbjct: 197 YNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRM 256
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
K+N D ++Y I+ L V +EM +++ +S D Y+T+ N Y+ AG
Sbjct: 257 KKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEM-AENGVSPDVVVYNTMLNGYLRAGR 315
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGL--QKIKCKKQLNRD 316
E+ + K E + + YN LI DE + W L +K C +
Sbjct: 316 IEECLELWKVMEK--EGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMT-- 371
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y ++ L K G L +A +LEE E D + ++ G ++G +++ VL ++
Sbjct: 372 YGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMT 431
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGD 436
K G P P + + G+ + +E A ++ K P +++++ L
Sbjct: 432 KHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVS-----KGCFPTVVTYNTLINGLSK 486
Query: 437 NRDVEEVEAFVSSLKIKVQKRNMY-HALTEAHIRSGQEVD 475
E A V + K K NM ++L + G+++D
Sbjct: 487 AERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLD 526
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 112/264 (42%), Gaps = 2/264 (0%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +LLN + DE+ S + MG + YN ++ + Q +K ++L M
Sbjct: 92 YNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMW 151
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G PD FSY INS +S + EM + ++ D Y+ + + + G
Sbjct: 152 GQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERG-VTPDVACYNILIDGFFKKGDI 210
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
A ++ S + YN +I+ G DE + W K + Q Y T
Sbjct: 211 LNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYST 270
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
++ L G L+ A ++ +E + D V N +L GY + G IE+ + K + K+G
Sbjct: 271 LIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG 330
Query: 380 KTPTPNSWSIIAAGYADKNNMEKA 403
T S++I+ G + +++A
Sbjct: 331 -CRTVVSYNILIRGLFENAKVDEA 353
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 117/288 (40%), Gaps = 12/288 (4%)
Query: 120 LESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM 179
LE AE N D D Y +++N REG +DE ++ +M + G + N ++
Sbjct: 392 LEEAE---NGRGDLDTFA--YSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVI 446
Query: 180 CLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHI 239
+ + E +M G P +Y IN S +++EM Q
Sbjct: 447 NGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEM-LQKGW 505
Query: 240 SMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISH-YASLGNKDEM 298
+ TYS + N + G K + L C+ + K + +++I H S G ++
Sbjct: 506 KPNMITYSLLMN-GLCQGKKLDMALNL-WCQALEKGFKPDVKMHNIIIHGLCSSGKVEDA 563
Query: 299 MKFWG-LQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL 357
++ + +++ C L + T++ K+ + E A K+ + D NI L
Sbjct: 564 LQLYSEMKQRNCVPNL-VTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLK 622
Query: 358 GYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGY-ADKNNMEKAF 404
G I A L + V +G PT +W+I+ GY A K ME F
Sbjct: 623 GLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGYLALKGYMEPVF 670
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 70/345 (20%), Positives = 135/345 (39%), Gaps = 34/345 (9%)
Query: 70 LELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNS 129
L +RVI+ L+S K AL + D + + G F+
Sbjct: 8 LSPKRVIKLLKSEKNPHSALSI-------------------FDSVTRFPGYSHTPYVFHH 48
Query: 130 LNDEDKVDKLYGALL--NCYVREGLVDESLSLMQKMKEM-GSFGSALNYNGIMCLYTNTG 186
+ + +L+ L + Y + + D++L + Q+M E+ G +YN ++ +
Sbjct: 49 I-----LKRLFDPKLVAHAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESN 103
Query: 187 QHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTY 246
+ ++ L + G+ P+ +Y I I + + + +L M Q S D +Y
Sbjct: 104 KWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQG-FSPDVFSY 162
Query: 247 STVANYYIIAGLKEKAIIYLKKCEDIVSK--SKDALGYNHLISHYASLGNKDEMMKFW-G 303
T+ N G A LK +++ + + D YN LI + G+ + W
Sbjct: 163 GTLINSLAKNGYMSDA---LKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWER 219
Query: 304 LQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKG 363
L K Y M+ L K G+ +E+ ++ + + D + ++ G G
Sbjct: 220 LLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSG 279
Query: 364 MIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMK 408
++ A V KE+ + G +P ++ + GY +E+ E K
Sbjct: 280 NLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWK 324
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 132/306 (43%), Gaps = 14/306 (4%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM-CLYTNTGQHEKIPDVLLD 197
+Y +LN Y+R G ++E L L + M++ G + ++YN ++ L+ N E I +
Sbjct: 302 VYNTMLNGYLRAGRIEECLELWKVMEKEGC-RTVVSYNILIRGLFENAKVDEAI-SIWEL 359
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
+ E D+ +Y + ++ L+ ++L+E E+ +D YS++ N G
Sbjct: 360 LPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAEN-GRGDLDTFAYSSMINGLCREG 418
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
++ L + K + N +I+ + ++ ++F+G K Y
Sbjct: 419 RLDEVAGVLDQMTKHGCKPNPYVC-NAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTY 477
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
T++ L K EA +++E + + ++++ G Q ++ A + + ++
Sbjct: 478 NTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALE 537
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVS--SILDWLG 435
KG P +II G +E +AL ++ E K P+LV+ ++++
Sbjct: 538 KGFKPDVKMHNIIIHGLCSSGKVE-------DALQLYSEMKQRNCVPNLVTHNTLMEGFY 590
Query: 436 DNRDVE 441
RD E
Sbjct: 591 KVRDFE 596
>gi|357138821|ref|XP_003570985.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Brachypodium distachyon]
Length = 613
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 78/385 (20%), Positives = 155/385 (40%), Gaps = 63/385 (16%)
Query: 79 LRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDK 138
L++R K A++V + M + + + + +++ GK + SA FN +
Sbjct: 268 LKARCTVK-AVEVYQRMKKERCRTNTETYTLMINVYGKSKQPMSAMKIFNEMQSIGCKAN 326
Query: 139 L--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
+ Y AL+N + REGL +++ + ++M++ G YN +M Y+ G + ++
Sbjct: 327 ICTYTALVNAFAREGLCEKAEEVFEQMQQAGHEPDVYAYNALMEAYSRAGFPQGASEIFS 386
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
M+ G PD SY I +++YG E + ++ Q G T+ ++ ++
Sbjct: 387 LMQHMGCEPDRASYNILVDAYGRAGLHREAEATFESLKQQ-------GMAPTMKSHMLLL 439
Query: 257 GLKEKAIIYLKKCEDIVSK------SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCK 310
++ + +CE ++++ D N ++ YA
Sbjct: 440 SAHARSG-NVGRCEQVMAQLHKSGLRPDTFALNAMLHAYA-------------------- 478
Query: 311 KQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADA 370
+ G L++ E++L +L+ D N+ + Y++ G + + +A
Sbjct: 479 ---------------RAGRLDDMERLLAAMDLAGSA-DVGSHNVAVNAYARAGYLGRMEA 522
Query: 371 VLKEIVK-KGKTPTPN----SWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPS 425
+ I + KGK + SW+ GYA K K E +E + + P
Sbjct: 523 AFEGIRRRKGKKGGIDADVVSWTSRMGGYARKKEYGKCLEIFEEMV-----DAGCYPDAG 577
Query: 426 LVSSILDWLGDNRDVEEVEAFVSSL 450
++ D R VE+V A V S+
Sbjct: 578 TAKVLMAACSDERQVEQVAAIVRSM 602
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 74/382 (19%), Positives = 152/382 (39%), Gaps = 47/382 (12%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQG-LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE 133
V QLR +++ + V EW+ + + + + +D G+ R L AE+ + ++ +
Sbjct: 157 VAVQLRLNRQWDPIISVCEWIVYRSSFRPDIICYNLLIDAYGRKRQLNKAESIYAAVLEA 216
Query: 134 DKV--DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
V + Y LL Y + + ++ +M+E G SA YN + K
Sbjct: 217 QCVPTEDTYALLLRAYCNARSLHRAEGVISEMQEHGIPPSATVYNAYLDGLLKARCTVKA 276
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
+V MK+ + +Y + IN YG + S + EM+S + TY+ + N
Sbjct: 277 VEVYQRMKKERCRTNTETYTLMINVYGKSKQPMSAMKIFNEMQSIG-CKANICTYTALVN 335
Query: 252 YYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGL-QKIKCK 310
+ GL EKA ++ + D YN L+ Y+ G + + L Q + C+
Sbjct: 336 AFAREGLCEKAEEVFEQMQQ-AGHEPDVYAYNALMEAYSRAGFPQGASEIFSLMQHMGCE 394
Query: 311 KQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADA 370
D NI++ Y + G+ +A+A
Sbjct: 395 P------------------------------------DRASYNILVDAYGRAGLHREAEA 418
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSI 430
+ + ++G PT S ++ + +A N+ + + M + +H+ RP ++++
Sbjct: 419 TFESLKQQGMAPTMKSHMLLLSAHARSGNVGRCEQVMAQ---LHKSG--LRPDTFALNAM 473
Query: 431 LDWLGDNRDVEEVEAFVSSLKI 452
L ++++E ++++ +
Sbjct: 474 LHAYARAGRLDDMERLLAAMDL 495
>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 147/330 (44%), Gaps = 7/330 (2%)
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYF-NSLNDEDKVDK-LYG 141
R + AL + + M +G A +V+ + + +GK +E A + F N L + K D L
Sbjct: 280 RVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLIN 339
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM-CLYTNTGQHEKIPDVLLDMKE 200
L+N + G + +++ L ++M+ + + + YN ++ L+ + + + MKE
Sbjct: 340 NLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKE 399
Query: 201 NGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKE 260
NGV P +F+Y I I+ + + + +L+EM+ + Y ++ N A E
Sbjct: 400 NGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCP-AAYCSLINALGKAKRYE 458
Query: 261 KAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWG-LQKIKCKKQLNRDYIT 319
A ++ + S A Y +I H G E + + ++K+ C + Y
Sbjct: 459 AANELFQELRENCGYS-SARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDV-YAYNA 516
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
++ +V++G +EA +L E + D NIIL G+++ G + A + +
Sbjct: 517 LMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSK 576
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
P S++ + + E+A + MKE
Sbjct: 577 IKPDVVSYNTVLGCLSRAGMFEEAAKLMKE 606
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 138/330 (41%), Gaps = 40/330 (12%)
Query: 114 IGKVRGLESAETYFNSL--NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGS 171
GK+ +SA + F+ + N K+Y +L Y + G V+++L L+Q+MKE G +
Sbjct: 240 FGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALT 299
Query: 172 ALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQ 231
Y ++ G+ E+ + ++M + G PD IN G L+ + +
Sbjct: 300 VYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFE 359
Query: 232 EMESQSHISMDWGTYSTV--ANYYIIAGLKEKAIIYLKKCEDIVSKSK------------ 277
EMES + + TY+TV A + A E + Y K E+ V S
Sbjct: 360 EMESL-QCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCK 418
Query: 278 --------------DALGYNHLISHYASLGNKDEMMKFWG-----LQKIK--CKKQLNRD 316
D G+ + Y SL N K + Q+++ C R
Sbjct: 419 TNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARV 478
Query: 317 YITMLGSLVKIGELEEAEKMLEEW-ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
Y M+ L K G L EA + E +L C D N ++ G + GM ++A ++L+ +
Sbjct: 479 YAVMIKHLGKCGRLSEAVDLFNEMKKLGCN-PDVYAYNALMSGMVRVGMTDEAHSLLRTM 537
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
+ G TP NS +II G+A + A E
Sbjct: 538 EENGCTPDLNSHNIILNGFARTGGPKGAIE 567
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 79/177 (44%), Gaps = 3/177 (1%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I L KR++ A ++ + + S +AV + +GK L A FN +
Sbjct: 447 LINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLG 506
Query: 135 KVDKLYG--ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+Y AL++ VR G+ DE+ SL++ M+E G ++N I+ + TG +
Sbjct: 507 CNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAI 566
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTV 249
++ MK + + PD SY + +++EM S+ D TYS++
Sbjct: 567 EMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKG-FEYDLITYSSI 622
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 94/439 (21%), Positives = 172/439 (39%), Gaps = 66/439 (15%)
Query: 67 ISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETY 126
I +L +++ L K AL + + G+ + + + + ++ + E
Sbjct: 157 IGPADLSEIVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHEL 216
Query: 127 FNSLNDE-----DKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCL 181
+N + +E D V Y AL+ + + G D ++SL +MKE G +A Y I+ +
Sbjct: 217 YNEMCNEGDCLPDTVT--YSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGI 274
Query: 182 YTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISM 241
Y G+ EK ++ +MKE G ++Y I G ++ ++ M
Sbjct: 275 YFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNM-------- 326
Query: 242 DWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMK- 300
LKE D + N+LI+ G + +K
Sbjct: 327 ----------------LKEGC-------------KPDVVLINNLINLLGKAGRLADAIKL 357
Query: 301 FWGLQKIKCKKQLNRDYITMLGSLVKI-GELEEA----EKMLEEWEL-SCYCYDFRVPNI 354
F ++ ++C + Y T++ +L + EA EKM E + S + Y +I
Sbjct: 358 FEEMESLQCTPNV-VTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTY-----SI 411
Query: 355 ILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVH 414
++ G+ + +EKA +L+E+ +KG P P ++ + E A E +E
Sbjct: 412 LIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQEL---- 467
Query: 415 EENKFWRPKPSLVSSILDWLGD-NRDVEEVEAFVSSLKIKVQKR-NMYHALTEAHIRSGQ 472
EN + + + ++ LG R E V+ F K+ Y+AL +R G
Sbjct: 468 RENCGYS-SARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGM 526
Query: 473 --EVDGLLESMKADDIDED 489
E LL +M+ + D
Sbjct: 527 TDEAHSLLRTMEENGCTPD 545
>gi|225423724|ref|XP_002276864.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Vitis vinifera]
Length = 587
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 154/362 (42%), Gaps = 21/362 (5%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLES----AETYFNSL 130
V QLR K++ + + W+ + S H + +L+ G +S AE+ + L
Sbjct: 138 VAVQLRLNKQWDAIVLICGWILYRS---SFHPDVICYNLLIDAYGQKSLYKKAESTYLEL 194
Query: 131 NDEDKV--DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQH 188
+ V + Y LL Y GL++++ ++ +M++ G SA+ YN + G
Sbjct: 195 LEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDT 254
Query: 189 EKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYST 248
+K ++ MK + P +Y + IN YG S+ V EM SQ + T++
Sbjct: 255 QKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQK-CKPNICTFTA 313
Query: 249 VANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGL-QKI 307
+ N + GL EKA ++ ++ D YN L+ Y+ G + + L Q +
Sbjct: 314 LVNAFAREGLCEKAEEIFEQLQE-AGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHM 372
Query: 308 KCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEK 367
C+ Y M+ + + G E+A+ + E + + ++L YS+ G + K
Sbjct: 373 GCEPD-RASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAK 431
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLV 427
+ ++ ++ K G P + + Y EK M+E L E+ P P+ +
Sbjct: 432 CEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEK----MEEVLTAMEKG----PYPADI 483
Query: 428 SS 429
S+
Sbjct: 484 ST 485
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/328 (20%), Positives = 135/328 (41%), Gaps = 39/328 (11%)
Query: 86 KHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGAL 143
+ A+++ E M S + + ++L GK A F+ + + + + AL
Sbjct: 255 QKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTAL 314
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
+N + REGL +++ + ++++E G YN +M Y+ G ++ M+ G
Sbjct: 315 VNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGC 374
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAI 263
PD SY I +++YG R+ L + E+ + I+ ++ + + Y AG
Sbjct: 375 EPDRASYNIMVDAYG-RAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAG------ 427
Query: 264 IYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGS 323
+ KCE+IV++ + G K + LN +ML
Sbjct: 428 -KVAKCEEIVNQMHKS-------------GIKPDTF------------VLN----SMLNL 457
Query: 324 LVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPT 383
++G+ E+ E++L E Y D NI++ Y + G + + + + + + P
Sbjct: 458 YGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPD 517
Query: 384 PNSWSIIAAGYADKNNMEKAFECMKEAL 411
+W+ Y+ + + E +E +
Sbjct: 518 VVTWTSRIGAYSRRKQYNRCLEVFEEMI 545
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 77/181 (42%), Gaps = 9/181 (4%)
Query: 81 SRKRFKH-ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLN--DEDKVD 137
SR F + A ++ M G + + +D G+ E A+ F +
Sbjct: 354 SRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTM 413
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
K + LL+ Y R G V + ++ +M + G N ++ LY GQ EK+ +VL
Sbjct: 414 KSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTA 473
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHIS--MDW----GTYSTVAN 251
M++ P D +Y I IN YG + ME + + + +++ I + W G YS
Sbjct: 474 MEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQ 533
Query: 252 Y 252
Y
Sbjct: 534 Y 534
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 97/442 (21%), Positives = 166/442 (37%), Gaps = 64/442 (14%)
Query: 48 DPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHD- 106
+PDV L + +G ++ E Q+V+ + R + + S + G V D
Sbjct: 333 EPDVVTFTALMDGLCKGDRLQEA--QQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDA 390
Query: 107 HAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEM 166
V +I VRG+E +NSL ++G + VD +L LM++M
Sbjct: 391 QEVFKRMI--VRGIEPNVVTYNSL--------IHG-----FCMTNGVDSALLLMEEMTAT 435
Query: 167 GSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSM 226
G + YN ++ TG+ + + DMK PD +Y I + +
Sbjct: 436 GCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMA 495
Query: 227 ENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK--SKDALGYNH 284
+ +M Q+ + D T+ST+ Y AGL + A L E++V+ S D Y
Sbjct: 496 RTLFDDMLKQAVLP-DVVTFSTLVEGYCNAGLVDDAERLL---EEMVASDCSPDVYTYTS 551
Query: 285 LISHYASLGNKDE----------------MMKFWGLQKIKCKK----------------- 311
L+ + +G E ++ + L C+
Sbjct: 552 LVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNG 611
Query: 312 -QLNR-DYITMLGSLVKIGELEEAEKMLEEWELSCYC-YDFRVPNIILLGYSQKGMIEKA 368
Q N Y +++G G+LEEA K+LE E C D +++ G + G + A
Sbjct: 612 VQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAA 671
Query: 369 DAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVS 428
+L+ I + G P + + + G + KA E ++E + RP
Sbjct: 672 LELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKS----RPNAEAYE 727
Query: 429 SILDWLGDNRDVEEVEAFVSSL 450
+++ L EE A L
Sbjct: 728 AVIQELAREGRHEEANALADEL 749
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 138/319 (43%), Gaps = 26/319 (8%)
Query: 108 AVQLDLIGKVRGLESAETYFNSLNDEDKVDK--LYGALLNCYVREGLVDESLSLMQKMKE 165
+ +D + K L A TYF + + V Y L+N + + V + L+++MKE
Sbjct: 130 TIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKE 189
Query: 166 MGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSS 225
G + + Y+ ++ + + + + M ENG P+ +Y ++ +
Sbjct: 190 SGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDE 249
Query: 226 MENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAII--YLKKCEDIVSK--SKDALG 281
+L EM + + D +Y T ++AGL + I LK ED + D +
Sbjct: 250 AYELLDEMRERG-LQPDKFSYDT-----LMAGLCKTGKIDMALKVFEDNSNGDCPPDVVA 303
Query: 282 YNHLISHYASLGNKDEMMK-FWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEW 340
Y+ LI+ G DE K F +++ C+ + + ++ L K L+EA+++LE
Sbjct: 304 YSTLIAGLCKAGRLDEACKLFEKMRENSCEPDV-VTFTALMDGLCKGDRLQEAQQVLETM 362
Query: 341 E-LSCYCYDFRVPNII-----LLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGY 394
E +C PN+I + G + G + A V K ++ +G P +++ + G+
Sbjct: 363 EDRNC------TPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGF 416
Query: 395 ADKNNMEKAFECMKEALAV 413
N ++ A M+E A
Sbjct: 417 CMTNGVDSALLLMEEMTAT 435
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/274 (19%), Positives = 118/274 (43%), Gaps = 12/274 (4%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+ + G +DE+ L +KM+E + + +M + ++ VL M+
Sbjct: 304 YSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETME 363
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ P+ +Y I+ ++ + V + M + I + TY+++ + + +
Sbjct: 364 DRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRG-IEPNVVTYNSLIHGFCMTNGV 422
Query: 260 EKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
+ A++ + E++ + D + YN LI G E + +G K K N D
Sbjct: 423 DSALLLM---EEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMK---AKFCNPDV 476
Query: 318 IT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
IT ++G K+ ++ A + ++ D + ++ GY G+++ A+ +L+E
Sbjct: 477 ITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEE 536
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMK 408
+V +P +++ + G+ M +A +K
Sbjct: 537 MVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLK 570
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 73/375 (19%), Positives = 150/375 (40%), Gaps = 49/375 (13%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L +R +DE+ +++ G + Y ++ +G +K ++L +M+
Sbjct: 27 YNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELLEEMR 86
Query: 200 ENGVPPDNFSYRICI-------NSYGARSELSSME---NVLQ------------------ 231
E+G PD Y I N+ A SME NV+
Sbjct: 87 ESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVITWTIMIDGLCKANRLPEAT 146
Query: 232 ----EMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLIS 287
+M+ + + +W TY+ + N + +A + LK+ ++ + + + Y+ +I
Sbjct: 147 TYFAKMKKKGTVPNEW-TYNVLINGFCKVHKVHRAYLLLKEMKE-SGLAPNVVTYSTVIH 204
Query: 288 HYASLGNKDEMMK-FWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYC 346
+ D K F + + C L Y T+L L + G ++EA ++L+E
Sbjct: 205 GFCRQTKVDTAYKLFRQMVENGCMPNL-VTYNTLLSGLCRNGLMDEAYELLDEMRERGLQ 263
Query: 347 YDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA--- 403
D + ++ G + G I+ A V ++ P ++S + AG +++A
Sbjct: 264 PDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKL 323
Query: 404 FECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNM--YH 461
FE M+E P ++++D L ++E + + +++ + N+ Y
Sbjct: 324 FEKMRE--------NSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYS 375
Query: 462 ALTEAHIRSGQEVDG 476
+L + ++GQ D
Sbjct: 376 SLIDGLCKTGQVRDA 390
>gi|242061252|ref|XP_002451915.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
gi|241931746|gb|EES04891.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
Length = 571
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 134/323 (41%), Gaps = 42/323 (13%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED-KVDKLY-GALLN 145
AL + E M Q V + + +GK ++ A +F + E + D + ++N
Sbjct: 284 ALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMIN 343
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM-CLYTNTGQHEKIPDVLLDMKENGVP 204
+ G +D+++ L Q+M + S + YN I+ L+ + + ++P MKE+G+
Sbjct: 344 FLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGIS 403
Query: 205 PDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAII 264
P +F+Y I I+ + + + +L+EM+ +
Sbjct: 404 PSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKG--------------------------- 436
Query: 265 YLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSL 324
C DALG D + + K C +R Y M+ L
Sbjct: 437 -FPPCPAAYCSLIDALG---------KAKRYDLACELFQELKENCGSSSSRVYAVMIKHL 486
Query: 325 VKIGELEEAEKMLEEW-ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPT 383
K G L++A M +E +L C D N ++ G ++ GM+++A + ++ + + G P
Sbjct: 487 GKAGRLDDAINMFDEMNKLGC-APDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPD 545
Query: 384 PNSWSIIAAGYADKNNMEKAFEC 406
NS++II G + ++ + C
Sbjct: 546 INSYNIILNGLQKQEDLIVQWRC 568
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 127/296 (42%), Gaps = 29/296 (9%)
Query: 152 LVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG-VPPDNFSY 210
+V +++++ ++K +A YN ++ + + GQ+EK+ ++ +M G PD +Y
Sbjct: 174 MVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSTEGHCFPDTMTY 233
Query: 211 RICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK------AII 264
I+++ S +L EM+ D G T Y ++ L K A+
Sbjct: 234 SALISAFCKLGRRDSAIQLLNEMK-------DNGMQPTTKIYTMLVALFFKLNDVHGALS 286
Query: 265 YLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKF-WGLQKIKCKKQLNRDYITM--- 320
++ + D Y LI G DE F + +Q+ C+ D I M
Sbjct: 287 LFEEMRHQYCRP-DVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRP----DTIVMNNM 341
Query: 321 LGSLVKIGELEEAEKMLEEW-ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
+ L K G L++A K+ +E L C II + K + + + + + G
Sbjct: 342 INFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESG 401
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLG 435
+P+ ++SI+ G+ N MEKA ++E + K + P P+ S++D LG
Sbjct: 402 ISPSSFTYSILIDGFCKTNRMEKAMMLLEEM-----DEKGFPPCPAAYCSLIDALG 452
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 132/279 (47%), Gaps = 15/279 (5%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMG-SFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
Y +++ + EG ++ L +M G F + Y+ ++ + G+ + +L +M
Sbjct: 197 YNSMIIMLMHEGQYEKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSAIQLLNEM 256
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
K+NG+ P Y + + + +++ ++ +EM Q + D TY+ + AG
Sbjct: 257 KDNGMQPTTKIYTMLVALFFKLNDVHGALSLFEEMRHQ-YCRPDVFTYTELIRGLGKAGR 315
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMK-FWGLQKIKCKKQLNRDY 317
++A + + + + D + N++I+ G D+ MK F + ++C + Y
Sbjct: 316 IDEAYHFFYEMQREGCRP-DTIVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVV-TY 373
Query: 318 ITMLGSLV----KIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
T++ +L + E+ + ++E +S + + +I++ G+ + +EKA +L+
Sbjct: 374 NTIIKALFESKSRASEVPSWFERMKESGISPSSFTY---SILIDGFCKTNRMEKAMMLLE 430
Query: 374 EIVKKGKTPTPNSWS--IIAAGYADKNNME-KAFECMKE 409
E+ +KG P P ++ I A G A + ++ + F+ +KE
Sbjct: 431 EMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKE 469
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I L KR+ A ++ + + + S +AV + +GK L+ A F+ +N
Sbjct: 447 LIDALGKAKRYDLACELFQELKENCGSSSSRVYAVMIKHLGKAGRLDDAINMFDEMNKLG 506
Query: 135 KVDKLYG--ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM 179
+Y AL++ R G++DE+LS M++M+E G +YN I+
Sbjct: 507 CAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIIL 553
>gi|357116849|ref|XP_003560189.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Brachypodium distachyon]
Length = 737
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 128/271 (47%), Gaps = 11/271 (4%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+Y ++N Y + ++E+ L +MKE G + + YN +M Y+ Q E + +LL+M
Sbjct: 391 IYNEIVNAYCKCSQIEEAEGLFVEMKEKGLKPTIVTYNILMDAYSRRLQPEVVESLLLEM 450
Query: 199 KENGVPPDNFSYRICINSYGARSELS-SMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
+ G+ P+ SY I++YG + ++S E+ M++ I +Y+++ Y + G
Sbjct: 451 HDLGLQPNARSYNCLISAYGRQKKMSEKAEDAFLRMKADG-IKPTSSSYTSLLCAYAVNG 509
Query: 258 LKEKA-IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
EKA I Y+ ++ + S + Y L+ + G+ D++M+ W + +++
Sbjct: 510 QYEKAHITYVDMKKERLKPSLET--YTALLDIFRRAGDTDKLMETW---RSMINEKVGGT 564
Query: 317 YIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
+T +L L K G +A ++ E+ NI++ Y++ G K +LK
Sbjct: 565 RVTFHMVLDGLAKYGLYVQARDVIYEFGNIGLPPTTMTYNILMNTYAKGGQHYKLPQLLK 624
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
E+ P ++S + YA + KAF
Sbjct: 625 EMSALELKPDSVTYSTMIYAYARVRDFSKAF 655
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 152/344 (44%), Gaps = 26/344 (7%)
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVR-GLESAETYFNSLNDED---KVDKL 139
R+ A + E+M + ++ L+++ K + ++A +F +N + +D +
Sbjct: 298 RYDDAWTIFEFMEKNSVQPDHITSSIMLNVMKKQKVSAKAAWEFFQRMNRKGVKWSLD-V 356
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+L+ + EGL E+L + +M+ G + YN I+ Y Q E+ + ++MK
Sbjct: 357 SASLIKMFCDEGLKKEALIIQSEMERRGIPSNTSIYNEIVNAYCKCSQIEEAEGLFVEMK 416
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E G+ P +Y I +++Y R + +E++L EM D G +Y +
Sbjct: 417 EKGLKPTIVTYNILMDAYSRRLQPEVVESLLLEMH-------DLGLQPNARSYNCLISAY 469
Query: 260 EKAIIYLKKCEDIVSKSK------DALGYNHLISHYASLGNKDEM-MKFWGLQKIKCKKQ 312
+ +K ED + K + Y L+ YA G ++ + + ++K + K
Sbjct: 470 GRQKKMSEKAEDAFLRMKADGIKPTSSSYTSLLCAYAVNGQYEKAHITYVDMKKERLKPS 529
Query: 313 LNRDYITMLGSLVKIGELEEAEKMLEEWE--LSCYCYDFRVP-NIILLGYSQKGMIEKAD 369
L Y +L + G + +K++E W ++ RV +++L G ++ G+ +A
Sbjct: 530 LE-TYTALLDIFRRAG---DTDKLMETWRSMINEKVGGTRVTFHMVLDGLAKYGLYVQAR 585
Query: 370 AVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAV 413
V+ E G PT +++I+ YA K + +KE A+
Sbjct: 586 DVIYEFGNIGLPPTTMTYNILMNTYAKGGQHYKLPQLLKEMSAL 629
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 138/330 (41%), Gaps = 17/330 (5%)
Query: 149 REGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNF 208
R + DE L ++ ++ F A+ YN M G+++ + M++N V PD+
Sbjct: 260 RARMADEVLEILGRLPHERQFREAVLYNAAMSGVAYCGRYDDAWTIFEFMEKNSVQPDHI 319
Query: 209 SYRICINSYGARSELSSMENVLQEMESQSHISMDWG--TYSTVANYYIIAGLKEKAIIYL 266
+ I +N + + S + + + + + W +++ + GLK++A+I
Sbjct: 320 TSSIMLNV--MKKQKVSAKAAWEFFQRMNRKGVKWSLDVSASLIKMFCDEGLKKEALIIQ 377
Query: 267 KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVK 326
+ E S ++ YN +++ Y +E + K K K Y ++ + +
Sbjct: 378 SEMERRGIPSNTSI-YNEIVNAYCKCSQIEEAEGLFVEMKEKGLKPTIVTYNILMDAYSR 436
Query: 327 IGELEEAEKMLEEWELSCYCYDFRVPNIILLGYS-QKGMIEKADAVLKEIVKKGKTPTPN 385
+ E E +L E + R N ++ Y QK M EKA+ + G PT +
Sbjct: 437 RLQPEVVESLLLEMHDLGLQPNARSYNCLISAYGRQKKMSEKAEDAFLRMKADGIKPTSS 496
Query: 386 SWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSL--VSSILDWLGDNRDVEEV 443
S++ + YA EKA + + K R KPSL +++LD D +++
Sbjct: 497 SYTSLLCAYAVNGQYEKAH-------ITYVDMKKERLKPSLETYTALLDIFRRAGDTDKL 549
Query: 444 -EAFVSSLKIKV-QKRNMYHALTEAHIRSG 471
E + S + KV R +H + + + G
Sbjct: 550 METWRSMINEKVGGTRVTFHMVLDGLAKYG 579
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 98/477 (20%), Positives = 203/477 (42%), Gaps = 27/477 (5%)
Query: 26 RAYRAVKPVAR--NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRK 83
R +R + P AR N L R+S G+ + + + + G S +I L
Sbjct: 187 RNFRTL-PKARSCNFLLHRLSKSGNGQL-VRKFFNDMIGAGIAPSVFTYNVMIDYLCKEG 244
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YG 141
+++ ++ M GL+ V + +D GKV LE + FN + D V + Y
Sbjct: 245 DLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYN 304
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
L+NCY + + + +MK G + + Y+ ++ + G + +L DM+
Sbjct: 305 GLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRT 364
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG-LKE 260
G+ P+ F+Y I++ L+ +L +M Q+ + ++ TY+ + + AG + E
Sbjct: 365 GLLPNEFTYTSLIDANCKAGNLTEAWKLLNDM-LQAGVKLNIVTYTALLDGLCKAGRMIE 423
Query: 261 KAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITM 320
++ +D +S ++ Y L+ Y ++ MK Q +C + + + +
Sbjct: 424 AEEVFRSMLKDGISPNQQV--YTALVHGYIKAERMEDAMKILK-QMTECNIKPD---LIL 477
Query: 321 LGSLV----KIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
GS++ +LEE + +LEE + + + I+ Y + G A +E+
Sbjct: 478 YGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQ 537
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGD 436
G T ++ ++ G + +E A + L++ +P ++ +S++D L
Sbjct: 538 DVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLG-----LQPNVAVYTSLIDGLCX 592
Query: 437 NRDVEEVEAFVSSLKIKVQKRNM--YHALTEAHIRSG--QEVDGLLESMKADDIDED 489
N +E + ++ + ++ + AL + +++ G QE L+ M I+ D
Sbjct: 593 NNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFD 649
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 144/327 (44%), Gaps = 24/327 (7%)
Query: 95 MSGQGLAFSVHDHAVQLDLIGKV-RGLESAETYFNSLNDEDKVDK-LYGALLNCYVREGL 152
M G+ ++ + LD + K R +E+ E + + L D ++ +Y AL++ Y++
Sbjct: 396 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAER 455
Query: 153 VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
+++++ ++++M E + Y I+ + + + E+ +L +MK G+ +
Sbjct: 456 MEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTT 515
Query: 213 CINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYII------AGLKEKAIIYL 266
I++Y + S N QEM+ D G +T+ Y ++ AG+ E A+ Y
Sbjct: 516 IIDAYFKAGKSSDALNFFQEMQ-------DVGVEATIVTYCVLIDGLCEAGIVELAVDYF 568
Query: 267 KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLV- 325
+ + + A+ Y LI + K + +++C+ + D IT +L+
Sbjct: 569 CRMLSLGLQPNVAV-YTSLIDGLCXNNCIESAKKLF--DEMQCRG-MTPD-ITAFTALID 623
Query: 326 ---KIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTP 382
K G L+EA ++ +D V ++ G+SQ G + +A E+++KG P
Sbjct: 624 GNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILP 683
Query: 383 TPNSWSIIAAGYADKNNMEKAFECMKE 409
+ Y + +++A E E
Sbjct: 684 EEVLCICLLREYYKRGQLDEAIELKNE 710
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 50/256 (19%), Positives = 110/256 (42%), Gaps = 12/256 (4%)
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
+++ Y + G ++L+ Q+M+++G + + Y ++ G E D M
Sbjct: 515 TIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSL 574
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
G+ P+ Y I+ + + S + + EM+ + ++ D ++ + + + G ++
Sbjct: 575 GLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRG-MTPDITAFTALIDGNLKHGNLQE 633
Query: 262 AIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITML 321
A++ + + ++ + D Y L+S ++ G + KF+ K I +L
Sbjct: 634 ALVLISRMTELAIEF-DLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLL 692
Query: 322 GSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVL------KEI 375
K G+L+EA ++ E E Y ++F L Y+++G+ A L +
Sbjct: 693 REYYKRGQLDEAIELKNEMERMAYSFEFDAQ----LAYNEQGVNLTLHAYLYLKFDIQHQ 748
Query: 376 VKKGKTPTPNSWSIIA 391
+ + T T WS+I
Sbjct: 749 LNRFGTSTMGPWSVIG 764
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 159/357 (44%), Gaps = 34/357 (9%)
Query: 70 LELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNS 129
++ R+ + K++ L + + M +G+A +++ ++ ++ + R L A F++
Sbjct: 73 IDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLA---FSA 129
Query: 130 LNDEDKVDKL--------YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGI--- 178
+ K+ KL + L+N EG V E+L L+ +M EMG + + N +
Sbjct: 130 MG---KIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNG 186
Query: 179 MCLYTNTGQHEKIPDVLL---DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMES 235
+CL + K+ D +L M E G P+ +Y + + + +L++ME
Sbjct: 187 LCL------NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKME- 239
Query: 236 QSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNK 295
+ I +D YS + + G + A + E I D + Y LI + G
Sbjct: 240 ERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME-IKGFKADIIIYTTLIRGFCYAGRW 298
Query: 296 DEMMKFWGLQKIKCKKQLNRDYI---TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVP 352
D+ K L + K+++ D + ++ VK G+L EAE++ +E D
Sbjct: 299 DDGAK---LLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTY 355
Query: 353 NIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
++ G+ ++ ++KA+ +L +V KG P +++I+ GY N ++ E ++
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRK 412
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 138/308 (44%), Gaps = 21/308 (6%)
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
AL+N G V +++ L+ +M E G + + Y ++ + +GQ ++L M+E
Sbjct: 182 ALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER 241
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
+ D Y I I+ L + N+ EME + D Y+T+ + AG +
Sbjct: 242 KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG-FKADIIIYTTLIRGFCYAGRWDD 300
Query: 262 AIIYLKKCEDIVSK--SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD--- 316
L+ D++ + + D + ++ LI + G E + L K ++ ++ D
Sbjct: 301 GAKLLR---DMIKRKITPDVVAFSALIDCFVKEGKLREAEE---LHKEMIQRGISPDTVT 354
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y +++ K +L++A ML+ + R NI++ GY + +I+ + +++
Sbjct: 355 YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS 414
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSS--ILDWL 434
+G +++ + G+ + +E A E +E ++ R +P +VS +LD L
Sbjct: 415 LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVS-------RRVRPDIVSYKILLDGL 467
Query: 435 GDNRDVEE 442
DN + E+
Sbjct: 468 CDNGEPEK 475
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 132/279 (47%), Gaps = 20/279 (7%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ AL++C+V+EG + E+ L ++M + G + Y ++ + Q +K +L M
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMV 379
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G P+ ++ I IN Y + + + ++M + ++ D TY+T+ + G
Sbjct: 380 SKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVA-DTVTYNTLIQGFCELGKL 438
Query: 260 EKAIIYLKKCEDIVSK--SKDALGYNHLISHYASLGNKDEMMKFWGLQKI-KCKKQLNRD 316
E A +++VS+ D + Y L+ G ++ ++ + +KI K K +L+
Sbjct: 439 EVAKELF---QEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIF--EKIEKSKMELDIG 493
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYC------YDFRVPNIILLGYSQKGMIEKADA 370
++ I + A K+ + W+L C D + NI++ G +KG + +AD
Sbjct: 494 IYNII-----IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADL 548
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
+ +++ + G +P +++I+ + + + K+ + ++E
Sbjct: 549 LFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEE 587
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 105/266 (39%), Gaps = 37/266 (13%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +++ ++G +D + +L +M+ G + Y ++ + G+ + +L DM
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ + PD ++ I+ + +L E + +EM Q IS D TY+++ + +
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEM-IQRGISPDTVTYTSLIDGFCKENQL 368
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
+KA NH++ S G + F L CK L
Sbjct: 369 DKA--------------------NHMLDLMVSKGCGPNIRTFNILINGYCKANL------ 402
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
+++ ++ + L D N ++ G+ + G +E A + +E+V +
Sbjct: 403 ----------IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR 452
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFE 405
P S+ I+ G D EKA E
Sbjct: 453 VRPDIVSYKILLDGLCDNGEPEKALE 478
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 101/242 (41%), Gaps = 37/242 (15%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
+ + L+N Y + L+D+ L L +KM G + YN ++ + G+ E ++ +
Sbjct: 388 RTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQE 447
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
M V PD SY+I ++ E + +++E +S + +D G Y+ II G
Sbjct: 448 MVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIE-KSKMELDIGIYNI-----IIHG 501
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
+ C SK DA + SL +K K + Y
Sbjct: 502 M----------CN--ASKVDDAWDL------FCSL-------------PLKGVKPDVKTY 530
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
M+G L K G L EA+ + + E + + NI++ + +G K+ +++EI +
Sbjct: 531 NIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKR 590
Query: 378 KG 379
G
Sbjct: 591 CG 592
>gi|147859909|emb|CAN83144.1| hypothetical protein VITISV_040783 [Vitis vinifera]
Length = 724
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 154/359 (42%), Gaps = 36/359 (10%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
LY L++ R + E+ L Q+ + L YN ++ EK +++ M
Sbjct: 227 LYSILIHALGRSEKLYEAFLLSQRQTL-----TPLTYNALIGACARNDDLEKALNLMSRM 281
Query: 199 KENGVPPDNFSYRICINSYGA--RSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
+ +G P D +Y I S +S+ S ++ + E+ES I +D + + + +
Sbjct: 282 RRDGYPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESD-KIELDGQLLNDIIVGFAKS 340
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKD---------EMMKFWGLQKI 307
G +A+ +L + K A L++ +LGN E +K GL
Sbjct: 341 GDVNRAMSFLAMVQGNGLSPKTAT----LVAVITALGNAGRTEEAEAIFEELKEGGLMP- 395
Query: 308 KCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEK 367
R Y +L VK G L++AE ++ E E S + D ++++ Y+ G E
Sbjct: 396 -----RTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWES 450
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLV 427
A VLKE+ G P +S I A Y D+ +K+F+ ++E N P
Sbjct: 451 ARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREM-----RNSGVSPDRHFY 505
Query: 428 SSILDWLGDNRDVEEVEAFVSSLKIK-VQKRNM-YHALTEAHIRSGQ--EVDGLLESMK 482
+ ++D G ++ A ++++ VQ + ++ L + H +SG + + L E+M+
Sbjct: 506 NVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQ 564
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 125/292 (42%), Gaps = 50/292 (17%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
VL + G + + R++ R R +++ + QV M G++ H + V +D G
Sbjct: 454 VLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFG 513
Query: 116 KVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNY 175
K NC +D +L+ +M+ G A+ +
Sbjct: 514 KC---------------------------NC------LDHALATFDRMRMEGVQPDAVTW 540
Query: 176 NGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMES 235
N ++ + +G H K ++ M+E+G P +Y I INS+G + ++ +L +M+S
Sbjct: 541 NTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQS 600
Query: 236 QSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCE-DIVSKSKDALGYNHLISHYASLGN 294
Q G + V Y + GL E+AI + D + S L N LI+ + +
Sbjct: 601 Q-------GLLANVVTYTTL-GLSEQAINAFRVMRADGLKPS--VLVLNSLINAFGE--D 648
Query: 295 KDEMMKFWGLQKIKCKKQLNRD---YITMLGSLVKIGELEEAEKMLEEWELS 343
+ + F LQ +K + L D Y T++ +L+++ + ++ + EE LS
Sbjct: 649 RRDAEAFSVLQYMK-ENDLKPDVVTYTTLMKALIRVEKFDKVPAVYEEMTLS 699
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 140/330 (42%), Gaps = 20/330 (6%)
Query: 58 DQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKV 117
D+ L+GQ +++ +I A+ + G GL+ + +G
Sbjct: 321 DKIELDGQLLND-----IIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNA 375
Query: 118 RGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNY 175
E AE F L + + + Y ALL YV+ G + ++ S++ +M+ G Y
Sbjct: 376 GRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTY 435
Query: 176 NGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMES 235
+ ++ Y N G+ E VL +M+ +GV P+++ + + SY R + VL+EM +
Sbjct: 436 SLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRN 495
Query: 236 QSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLG-- 293
S +S D Y+ + + + + A+ + + DA+ +N LI + G
Sbjct: 496 -SGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMR-MEGVQPDAVTWNTLIDCHCKSGHH 553
Query: 294 NKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPN 353
NK E + F +Q+ C Y M+ S + E+ + +L + + + N
Sbjct: 554 NKAEEL-FEAMQESGCSP-CTTTYNIMINSFGEQERWEDVKTLLGKMQSQGL-----LAN 606
Query: 354 IILLGYSQKGMIEKADAVLKEIVKKGKTPT 383
++ Y+ G+ E+A + + G P+
Sbjct: 607 VVT--YTTLGLSEQAINAFRVMRADGLKPS 634
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 150/353 (42%), Gaps = 12/353 (3%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +++ V+E +ES ++++M G +NG+M + + EK +V M
Sbjct: 119 YSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMV 178
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISM-DWGTYSTVANYYIIAGL 258
E+G PDN SY I I+ +L +L EM ++ + + T+ST+ + G
Sbjct: 179 ESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGE 238
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
EKA+ + K + Y LI+ + + + C Y
Sbjct: 239 LEKALEVFGSMLEAGCKP-NKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYN 297
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVP-NIILLGYSQKGMIEKADAVLKEIVK 377
+++ K G ++EAEK+ E V N ++ G+ + G + +A+ ++ E+
Sbjct: 298 SLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGT 357
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDN 437
KG ++ I+ AG + +++A E K+ E KF S V S + L
Sbjct: 358 KGLAADTCTYRILIAGLSRATKLDEALEVYKQ----MREKKFLLDPVSCV-SFVGGLCKT 412
Query: 438 RDVEEVEAFVSSLKIK--VQKRNMYHALTEAHIRSGQEVDG--LLESMKADDI 486
++++ A + + V + L+E+ I+ G+ D L+E KA DI
Sbjct: 413 GNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARDI 465
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 127/282 (45%), Gaps = 18/282 (6%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ++ + G++ ++L + + MK S + YN ++ N G+ K D+ MK
Sbjct: 13 YDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMK 72
Query: 200 -ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
E V PD ++Y I+ + +L EM + +I+ + TYS++ +
Sbjct: 73 REKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDK-NIAANVFTYSSIIKSLVKEAK 131
Query: 259 KEKAIIYLKKCEDIVSK--SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
E++ L E++++ + D +N ++ +A N ++ + + K N
Sbjct: 132 PEESYKVL---EEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVS 188
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL-----GYSQKGMIEKADAV 371
Y ++ L KIG+L+E+ K+L E + Y VPN+I G + G +EKA V
Sbjct: 189 YHILIHGLAKIGKLDESLKILSEMAMRAAGY---VPNVITFSTLIHGLCRTGELEKALEV 245
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA---FECMKEA 410
+++ G P +++ + AG + +A FE M +A
Sbjct: 246 FGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQA 287
>gi|388851710|emb|CCF54706.1| uncharacterized protein [Ustilago hordei]
Length = 1372
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 154/366 (42%), Gaps = 34/366 (9%)
Query: 77 RQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQL-DLIGKVRGLESAETYFNSLNDEDK 135
R R F A+ +E + +G VH+ +L D G+ E E + LN
Sbjct: 592 RGFTDRDGFSRAI-YTELAAARGDVQMVHEKLAELHDFEGRTH--EECEEGKSPLNG--- 645
Query: 136 VDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVL 195
K Y L+ R G +D + + + E G ++N ++ ++ + +
Sbjct: 646 --KAYRQLIQACNRAGDIDLAEHYLTQALERGIRPRTSDFNLLVDMHVRRTNVDAALAIF 703
Query: 196 LDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYII 255
+MKE GV PD ++Y I IN + R + S + L+ M + ++ D TY+ + N Y+
Sbjct: 704 DEMKEFGVQPDKYTYTILINGFALRRDPESAAHALRAMIAAG-VTPDRITYAALLNCYVE 762
Query: 256 AGLKEKAI---IYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWG-LQKIKCKK 311
+GL + AI ++K D+ + + L ++ S ++M+ G ++++
Sbjct: 763 SGLYDAAIRLFAWMKSHRDVRLRPTIEICNIILKAYVLSSMPVQKVMELVGKVREMGLNP 822
Query: 312 QLNRDYITMLGSLVKIGELEEAEKMLEE------------WELSCYCYDFRVPNIILLGY 359
N Y ML S G + AE++ E +E Y F I++ GY
Sbjct: 823 NTN-TYALMLQSACDAGLMHLAEEIFTEAERALPSLTGVGYEQGANLYHF---TIMIHGY 878
Query: 360 SQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE---CMKEALAVHEE 416
+ G +A E+ + TP+ +W+I+ YA N E ++ + L HE
Sbjct: 879 LRLGEHTEAKEYFDEMQSRKLTPSSITWNIMVRSYAHSEN-EATYDLACTLVSQLVAHES 937
Query: 417 NKFWRP 422
K +RP
Sbjct: 938 KKTFRP 943
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/371 (19%), Positives = 154/371 (41%), Gaps = 42/371 (11%)
Query: 137 DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
D +Y AL++ Y + ++ + +M + + + Y I+ G+ + +L
Sbjct: 45 DAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLD 104
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSH------------------ 238
+M++ G P+ ++Y + + +L + +L+EM + +
Sbjct: 105 EMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCD 164
Query: 239 -------------ISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHL 285
++ D +Y+TV N +G + A L + + + D + Y+ L
Sbjct: 165 RVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTN-RGCTPDVVTYSSL 223
Query: 286 ISHYASLGNKDEMMKFW-GLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSC 344
I + G + M + K+ C+ + Y ++LG+L ++G + +AE ML E E
Sbjct: 224 IDGFCKGGEVERAMGLLDSMLKLGCRPNMVA-YNSLLGALHRLGHIGKAEDMLVEMERRG 282
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
+ D N + G + ++KA AV +V++G TP +S+S++ K ++ A
Sbjct: 283 FTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAI 342
Query: 405 ECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL---KIKVQKRNMYH 461
+++A K+ L + +LD L +E A S + KI Y+
Sbjct: 343 TLVEQA-----REKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYN 397
Query: 462 ALTEAHIRSGQ 472
+ ++H + Q
Sbjct: 398 VMLDSHCKRRQ 408
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 116/282 (41%), Gaps = 22/282 (7%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +L++ + + G V+ ++ L+ M ++G + + YN ++ G K D+L++M+
Sbjct: 220 YSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEME 279
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G PD SY CI+ + + V M + + + +YS +
Sbjct: 280 RRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRM-VERGCTPNASSYSMLVEELCKKKEL 338
Query: 260 EKAIIYLKKCED---IVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
+ AI +++ + IV D L Y L+ G DE + K+ +K D
Sbjct: 339 DDAITLVEQAREKYQIV----DILLYTVLLDGLCKGGRFDEACALF--SKVLDEKICEPD 392
Query: 317 ---YITMLGSLVKIGELEEA----EKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKAD 369
Y ML S K ++++A ++MLE C + NI++ G + A+
Sbjct: 393 VFFYNVMLDSHCKRRQIDKALQIHKQMLER-----NCCNVVTWNILVHGLCVDDRLSDAE 447
Query: 370 AVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
+L +V +G P ++ + A E +EA+
Sbjct: 448 TMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAV 489
>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g07290, mitochondrial; Flags: Precursor
gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 880
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/389 (20%), Positives = 159/389 (40%), Gaps = 41/389 (10%)
Query: 58 DQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKV 117
DQ +G + S +I+ L R A + + M +G +VH + V +D + +
Sbjct: 290 DQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRD 349
Query: 118 RGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNY 175
+E A + + + Y AL+N Y ++G V + L+ M++ + +
Sbjct: 350 GKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTF 409
Query: 176 NGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMES 235
N +M G+ K +L M +NG+ PD SY + I+ +++ +L M
Sbjct: 410 NELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNC 469
Query: 236 QSHISMDWGTYSTVANYYIIAGLKEKAIIYL--------------------KKCEDIVSK 275
I D T++ + N + G + A +L C+ V K
Sbjct: 470 -FDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCK--VGK 526
Query: 276 SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCK--------KQLNR--------DYIT 319
++DAL + L + + CK ++N+ Y T
Sbjct: 527 TRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTT 586
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
++ L++ G++ + ++LE +LS + II+ G Q G +E+A+ +L + G
Sbjct: 587 LVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSG 646
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFECMK 408
+P +++++ GY + +++A E ++
Sbjct: 647 VSPNHVTYTVMVKGYVNNGKLDRALETVR 675
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 74/372 (19%), Positives = 155/372 (41%), Gaps = 31/372 (8%)
Query: 47 GDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHD 106
G DV+ + L + +G + E+ +I + + + AL + E + + + H
Sbjct: 490 GKADVA-SAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHS 548
Query: 107 HAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMK 164
V LD++ K ++ +N V + Y L++ +R G + S +++ MK
Sbjct: 549 LNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMK 608
Query: 165 EMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELS 224
G + Y I+ G+ E+ +L M+++GV P++ +Y + + Y +L
Sbjct: 609 LSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLD 668
Query: 225 SMENVLQEMESQSHISMDWGTYSTVANYYIIA--GL--KEKAIIYLKKCEDIVSKSKDAL 280
++ M + + ++ YS++ ++++ G+ E++ + DI + D
Sbjct: 669 RALETVRAMVERGY-ELNDRIYSSLLQGFVLSQKGIDNSEESTV-----SDIALRETDPE 722
Query: 281 GYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEW 340
N LIS LG C L I ++ L K G +E+ +++
Sbjct: 723 CINELISVVEQLGG--------------CISGL---CIFLVTRLCKEGRTDESNDLVQNV 765
Query: 341 ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNM 400
L + + +II+ Y K K ++ ++K G P+ S+ ++ G + +
Sbjct: 766 -LERGVFLEKAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDA 824
Query: 401 EKAFECMKEALA 412
E+A E + E L
Sbjct: 825 ERARELVMELLT 836
>gi|449444614|ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
gi|449528063|ref|XP_004171026.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
Length = 536
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/360 (20%), Positives = 152/360 (42%), Gaps = 35/360 (9%)
Query: 79 LRSRKRFKHALQVSEWMSGQGLA-FSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVD 137
L+++K + +L+ W++ Q + ++ H + L ++ K R +SAE+ S+ + +D
Sbjct: 89 LKTQKDYVLSLEFFNWVATQNPSSHTLETHCIILHILTKRRKFKSAESILRSIIESCSID 148
Query: 138 ---KLYGALLNCYVREGLVDESLSLMQ--------------------KMKEMGSFGSALN 174
KL+ +LL Y L D S + +MK+ G + +
Sbjct: 149 FPSKLFESLLYSY---RLCDSSPHVFDLLFKTFAHLKKFRNASDTFCRMKDYGFLPTVES 205
Query: 175 YNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEME 234
N + N + + +M+ + + P++++ + I + L V +EM
Sbjct: 206 CNAYLSSLLNFSRGDIALAFYREMRRSRIYPNSYTLNLVICACCKLGRLDKANVVFEEMG 265
Query: 235 SQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS---KDALGYNHLISHYAS 291
+ S + +Y+T+ Y GL A+ K ++ K+ D + +N L++ +
Sbjct: 266 TMG-FSPNVASYNTLIAGYCNKGLLSSAM----KLRSVMEKNGVPPDVVTFNTLVNGFCK 320
Query: 292 LGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRV 351
+G E K +G K Y ++ K G E ++ EE D
Sbjct: 321 VGKLQEASKLFGEMKGMSLSPTTVTYNILINGYSKAGNCEMGNRLFEEMSRFQVKADILT 380
Query: 352 PNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
N ++LG ++G +KA +++E+ +KG P +++S + G + E+AF+ K +
Sbjct: 381 YNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALIYGQCVQKQSERAFQIYKSMI 440
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 121/263 (46%), Gaps = 4/263 (1%)
Query: 154 DESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRIC 213
D +L+ ++M+ + ++ N ++C G+ +K V +M G P+ SY
Sbjct: 220 DIALAFYREMRRSRIYPNSYTLNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTL 279
Query: 214 INSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIV 273
I Y + LSS + ME ++ + D T++T+ N + G ++A + + +
Sbjct: 280 IAGYCNKGLLSSAMKLRSVME-KNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGM- 337
Query: 274 SKSKDALGYNHLISHYASLGNKDEMMK-FWGLQKIKCKKQLNRDYITMLGSLVKIGELEE 332
S S + YN LI+ Y+ GN + + F + + + K + Y ++ L K G+ ++
Sbjct: 338 SLSPTTVTYNILINGYSKAGNCEMGNRLFEEMSRFQVKADI-LTYNALILGLCKEGKTKK 396
Query: 333 AEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAA 392
A ++ E + + + ++ G + E+A + K ++K TP ++ ++ +
Sbjct: 397 AAYLVRELDEKGLVPNASTFSALIYGQCVQKQSERAFQIYKSMIKSSFTPCDQTFRMLLS 456
Query: 393 GYADKNNMEKAFECMKEALAVHE 415
+ + + + A + ++E L H+
Sbjct: 457 TFCENEDYDGAVQLLEEMLNRHK 479
>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
Length = 1595
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 144/345 (41%), Gaps = 26/345 (7%)
Query: 118 RGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNG 177
RG +NS+ D AL NC +++ ++++M G + +N
Sbjct: 1077 RGFSPNVQIYNSVID---------ALCNCRS----ATQAMVILKQMFASGCDPDIITFNT 1123
Query: 178 IMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS 237
++ + G K L + + P+ SY I+ + R EL ++L EM +
Sbjct: 1124 LITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRG 1183
Query: 238 HISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDE 297
H + D T+ + + ++AG +A+I +K + D YN LIS L K
Sbjct: 1184 H-TPDVVTFGALIHGLVVAGKVSEALIVREKMTE-RQVFPDVNIYNVLIS---GLCKKRM 1238
Query: 298 MMKFWGLQKIKCKKQLNRD---YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNI 354
+ + + +K + D Y T++ ++ L +A K+ E E C D N
Sbjct: 1239 LPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNA 1298
Query: 355 ILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVH 414
++ GY Q GM+ +A + + K G P +++ + +GYA + N+ A + + +
Sbjct: 1299 MIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMI--- 1355
Query: 415 EENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNM 459
+ +P SS+++ D + E ++++ + N+
Sbjct: 1356 --KRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNV 1398
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 127/288 (44%), Gaps = 33/288 (11%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
Y L++ Y R G + L L+ +M+ G + + Y ++ G EKI + L+M
Sbjct: 1015 FYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEM 1074
Query: 199 KENGVPPDNFSYRICINSY-GARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
++ G P+ Y I++ RS +M +L++M + S D T++T +I G
Sbjct: 1075 RKRGFSPNVQIYNSVIDALCNCRSATQAMV-ILKQMFA-SGCDPDIITFNT-----LITG 1127
Query: 258 LKEKAIIYLKKCEDIVSKS------KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKK 311
L + +++K E + ++ + L Y LI + G E+M L +
Sbjct: 1128 LCHEG--HVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRG---ELMVASDLLVEMMGR 1182
Query: 312 QLNRDYIT---MLGSLVKIGELEEA----EKMLEEWELSCYCYDFRVPNIILLGYSQKGM 364
D +T ++ LV G++ EA EKM E D + N+++ G +K M
Sbjct: 1183 GHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFP----DVNIYNVLISGLCKKRM 1238
Query: 365 IEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNM---EKAFECMKE 409
+ A +L+E+++K P ++ + G+ N+ K FE M+
Sbjct: 1239 LPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEH 1286
>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
Length = 713
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 116/268 (43%), Gaps = 41/268 (15%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
LY +LN + ++ LS ++K G +A Y I+ L+T G K D+L +M
Sbjct: 273 LYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEM 332
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
++GV P+ Y + ++ Y + ++ V ++M S AGL
Sbjct: 333 DKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVS--------------------AGL 372
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN--RD 316
K DIV+ YN L+ + G D+ + L+ I+ + L
Sbjct: 373 K----------PDIVT-------YNILVHAFCKAGRMDKALGV--LENIQANRLLPTIET 413
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y ++L VK G +++A ++ + + + N +L G ++ +E A +L E++
Sbjct: 414 YTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEML 473
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAF 404
G P S++ + GYA ++EKAF
Sbjct: 474 ANGVVPNERSYTALTEGYARAGDVEKAF 501
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 125/314 (39%), Gaps = 17/314 (5%)
Query: 104 VHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKM 163
+H +A D+ G V E + LN+ ++ ++++ Y G + + +K
Sbjct: 173 IHAYAEARDMEGAVACTEEMLSQGIQLNE-----AVFCSIISGYASAGNNEAAEHWFEKF 227
Query: 164 KEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSEL 223
K + YN I+ Y G E + +L M+E G + Y +N + +E+
Sbjct: 228 KAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGF---AEI 284
Query: 224 SSMENVLQEME--SQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALG 281
E L +S TY + + AG KA+ L++ D S + +
Sbjct: 285 RDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEM-DKHGVSPNKMI 343
Query: 282 YNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT---MLGSLVKIGELEEAEKMLE 338
Y ++ YA G+ K W + L D +T ++ + K G +++A +LE
Sbjct: 344 YAMIMDGYARGGDFTAAFKVW---EDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLE 400
Query: 339 EWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKN 398
+ + IL GY + G I+KA V I G P S++ + +G A
Sbjct: 401 NIQANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKAR 460
Query: 399 NMEKAFECMKEALA 412
ME A + E LA
Sbjct: 461 QMENARLMLDEMLA 474
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 77/379 (20%), Positives = 152/379 (40%), Gaps = 47/379 (12%)
Query: 95 MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLN--DEDKVDKLYGALLNCYVREGL 152
M +G ++ + L+ ++R E ++F+ L YG ++ + + G
Sbjct: 262 MEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGN 321
Query: 153 VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
+ ++L ++++M + G + + Y IM Y G V DM G+ PD +Y I
Sbjct: 322 MAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNI 381
Query: 213 CINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDI 272
++++ + VL+ +++ + TY+++ + Y+ G +KA+ + +
Sbjct: 382 LVHAFCKAGRMDKALGVLENIQANRLLPT-IETYTSILDGYVKGGHIQKALEVFDRIK-T 439
Query: 273 VSKSKDALGYNHLISHYASLGNK-------DEMMK------------------------- 300
+ YN L+S A DEM+
Sbjct: 440 AGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEK 499
Query: 301 -FWGLQKIKCKKQLNRD---YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIIL 356
F Q++K K+ L D Y +L + K G ++ A ++ ++ + ++ +L
Sbjct: 500 AFGMFQRMK-KENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTML 558
Query: 357 LGYSQKGMIEKADAVLKEIVKKG-KTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHE 415
G+++KG + KA +LK++ K G T S I A + + E + E LAV
Sbjct: 559 DGWARKGELSKARDLLKDMQKHGFHLDTICYTSFIKACFRSGDTEE-----VTETLAVMR 613
Query: 416 ENKFWRPKPSLVSSILDWL 434
E K + + I WL
Sbjct: 614 EKKLEVNARTYTTLIHGWL 632
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 71/154 (46%), Gaps = 2/154 (1%)
Query: 86 KHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV--DKLYGAL 143
+ AL+V + + GL V + L + K R +E+A + + V ++ Y AL
Sbjct: 428 QKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTAL 487
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
Y R G V+++ + Q+MK+ + Y ++ +G ++ +V + + G+
Sbjct: 488 TEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAGL 547
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMESQS 237
+ +Y ++ + + ELS ++L++M+
Sbjct: 548 KHNRITYCTMLDGWARKGELSKARDLLKDMQKHG 581
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/214 (19%), Positives = 97/214 (45%), Gaps = 11/214 (5%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
V D+ G + + ++ L ++ ++A + + M G+ + + +
Sbjct: 433 VFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTALTEGYA 492
Query: 116 KVRGLESAETYFNSLNDED-KVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
+ +E A F + E+ +D + YGALL + G + ++ + Q++ + G + +
Sbjct: 493 RAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAGLKHNRI 552
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSY----RICINSYGARSELSSMENV 229
Y ++ + G+ K D+L DM+++G D Y + C S G E++ V
Sbjct: 553 TYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTICYTSFIKACFRS-GDTEEVTETLAV 611
Query: 230 LQEMESQSHISMDWGTYSTVANYYIIAGLKEKAI 263
++E + + ++ TY+T+ + ++ A ++AI
Sbjct: 612 MREKK----LEVNARTYTTLIHGWLAAADPDQAI 641
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/329 (20%), Positives = 146/329 (44%), Gaps = 8/329 (2%)
Query: 85 FKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGA 142
F A+Q + L H D + K+ A ++ + D + +
Sbjct: 171 FSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNV 230
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
L++ +E ++E+ L ++ + G + +++N ++ Y +G ++ + M EN
Sbjct: 231 LMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENR 290
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
V PD F+Y + IN +L + EM + + D T++T+ N + + G +A
Sbjct: 291 VFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDV-TFTTLINGHCVTG---RA 346
Query: 263 IIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITM 320
+ ++ + ++ K D + YN LI+ +G+ E K + K Y +
Sbjct: 347 DLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTML 406
Query: 321 LGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGK 380
+ K G+LE A ++ +E D ++ G+ ++G + +A+ L+E+++ G
Sbjct: 407 IDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGI 466
Query: 381 TPTPNSWSIIAAGYADKNNMEKAFECMKE 409
P +++++ G+ K +++ F+ +KE
Sbjct: 467 KPDDATYTMVIHGFCKKGDVKTGFKLLKE 495
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 116/264 (43%), Gaps = 6/264 (2%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+N +EG +D++ L +M + G + + + ++ + TG+ + ++ M
Sbjct: 298 YSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQML 357
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
GV PD +Y IN +L + ++ EM +Q + D TY+ + + G
Sbjct: 358 RKGVKPDVITYNTLINGLCKVGDLREAKKLVIEM-TQRGLKPDKFTYTMLIDGCCKEGDL 416
Query: 260 EKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
E A+ K ++V + D + + LIS + G E + K + Y
Sbjct: 417 ESALEIRK---EMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATY 473
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
++ K G+++ K+L+E + + N++L G ++G ++ A+ +L ++
Sbjct: 474 TMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLN 533
Query: 378 KGKTPTPNSWSIIAAGYADKNNME 401
G P +++I+ G+ N E
Sbjct: 534 LGVVPDDITYNILLEGHCKHGNRE 557
>gi|359492929|ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Vitis vinifera]
Length = 513
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 124/272 (45%), Gaps = 9/272 (3%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGS-FGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
Y L+N G + E++ L ++M AL YN ++ + + + ++ ++ M
Sbjct: 239 YSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCHGEKVDRALKIMEFM 298
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
K+NG P+ F+Y +N + L + V EM+S + D Y+T+ N++ AG
Sbjct: 299 KKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLG-LKPDTVGYTTLINFFCRAGR 357
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDE---MMKFWGLQKIKCKKQLNR 315
++A+ LK + ++ D + +N ++ G +E M++ + + K
Sbjct: 358 VDEAMELLKDMRENKCRA-DTVTFNVILGGLCREGRFEEARGMLERLPYEGVYLNKA--- 413
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
Y +L SL + GEL++A +++ F N +L+ + G + A L +
Sbjct: 414 SYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGDAVMALLGL 473
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAFECM 407
++ G P PNSW+++ + + AFE +
Sbjct: 474 LELGFKPEPNSWALLVELICRERKLLPAFELL 505
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 105/239 (43%), Gaps = 45/239 (18%)
Query: 205 PDNFSYRICINSYGARSELSSMENVLQEMESQSHISM-DWGTYSTVANYYIIAGLKEKAI 263
P+ + I + + ++ S V++EM+ +SH+S + TYST+ N +G ++AI
Sbjct: 198 PNTCIFNILVKHHCKNGDIDSAFEVVEEMK-KSHVSYPNLITYSTLINGLCGSGRLKEAI 256
Query: 264 IYLKKCEDIVSKSK---DALGYNHLISHYASLGNKDEMMKFWG-LQKIKCKKQLNRDYIT 319
E++VSK + DAL YN LI+ + D +K ++K C + +Y
Sbjct: 257 ELF---EEMVSKDQILPDALTYNALINGFCHGEKVDRALKIMEFMKKNGCNPNV-FNYSA 312
Query: 320 MLGSLVKIGELEEAEKMLEEWE--------------LSCYCYDFRVP------------- 352
++ K G LEEA+++ +E + ++ +C RV
Sbjct: 313 LMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMRENK 372
Query: 353 --------NIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
N+IL G ++G E+A +L+ + +G S+ I+ + ++KA
Sbjct: 373 CRADTVTFNVILGGLCREGRFEEARGMLERLPYEGVYLNKASYRIVLNSLCREGELQKA 431
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 159/357 (44%), Gaps = 34/357 (9%)
Query: 70 LELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNS 129
++ R+ + K++ L + + M +G+A +++ ++ ++ + R L A F++
Sbjct: 73 IDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLA---FSA 129
Query: 130 LNDEDKVDKL--------YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGI--- 178
+ K+ KL + L+N EG V E+L L+ +M EMG + + N +
Sbjct: 130 MG---KIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNG 186
Query: 179 MCLYTNTGQHEKIPDVLL---DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMES 235
+CL + K+ D +L M E G P+ +Y + + + +L++ME
Sbjct: 187 LCL------NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKME- 239
Query: 236 QSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNK 295
+ I +D YS + + G + A + E I D + Y LI + G
Sbjct: 240 ERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME-IKGFKADIIIYTTLIRGFCYAGRW 298
Query: 296 DEMMKFWGLQKIKCKKQLNRDYI---TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVP 352
D+ K L + K+++ D + ++ VK G+L EAE++ +E D
Sbjct: 299 DDGAK---LLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTY 355
Query: 353 NIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
++ G+ ++ ++KA+ +L +V KG P +++I+ GY N ++ E ++
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRK 412
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 138/308 (44%), Gaps = 21/308 (6%)
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
AL+N G V +++ L+ +M E G + + Y ++ + +GQ ++L M+E
Sbjct: 182 ALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER 241
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
+ D Y I I+ L + N+ EME + D Y+T+ + AG +
Sbjct: 242 KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG-FKADIIIYTTLIRGFCYAGRWDD 300
Query: 262 AIIYLKKCEDIVSK--SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD--- 316
L+ D++ + + D + ++ LI + G E + L K ++ ++ D
Sbjct: 301 GAKLLR---DMIKRKITPDVVAFSALIDCFVKEGKLREAEE---LHKEMIQRGISPDTVT 354
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y +++ K +L++A ML+ + R NI++ GY + +I+ + +++
Sbjct: 355 YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS 414
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVS--SILDWL 434
+G +++ + G+ + +E A E +E ++ R +P +VS +LD L
Sbjct: 415 LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVS-------RRVRPDIVSYKILLDGL 467
Query: 435 GDNRDVEE 442
DN + E+
Sbjct: 468 CDNGEPEK 475
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 142/308 (46%), Gaps = 25/308 (8%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ AL++C+V+EG + E+ L ++M + G + Y ++ + Q +K +L M
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMV 379
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G P+ ++ I IN Y + + + ++M + ++ D TY+T+ + G
Sbjct: 380 SKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVA-DTVTYNTLIQGFCELGKL 438
Query: 260 EKAIIYLKKCEDIVSK--SKDALGYNHLISHYASLGNKDEMMKFWGLQKI-KCKKQLNRD 316
E A +++VS+ D + Y L+ G ++ ++ + +KI K K +L+
Sbjct: 439 EVAKELF---QEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIF--EKIEKSKMELDIG 493
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYC------YDFRVPNIILLGYSQKGMIEKADA 370
++ I + A K+ + W+L C D + NI++ G +KG + +AD
Sbjct: 494 IYNII-----IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADL 548
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSI 430
+ +++ + G +P +++I+ + + + K+ + ++E + + S V +
Sbjct: 549 LFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEI-----KRCGFSVDASTVKMV 603
Query: 431 LDWLGDNR 438
+D L D R
Sbjct: 604 VDMLSDGR 611
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 113/267 (42%), Gaps = 38/267 (14%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
+ + L+N Y + L+D+ L L +KM G + YN ++ + G+ E ++ +
Sbjct: 388 RTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQE 447
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
M V PD SY+I ++ E + +++E +S + +D G Y+ II G
Sbjct: 448 MVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIE-KSKMELDIGIYNI-----IIHG 501
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
+ C SK DA + SL +K K + Y
Sbjct: 502 M----------CN--ASKVDDAWDL------FCSL-------------PLKGVKPDVKTY 530
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
M+G L K G L EA+ + + E + + NI++ + +G K+ +++EI +
Sbjct: 531 NIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKR 590
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAF 404
G + ++ ++ +D ++K+F
Sbjct: 591 CGFSVDASTVKMVVDMLSD-GRLKKSF 616
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 105/266 (39%), Gaps = 37/266 (13%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +++ ++G +D + +L +M+ G + Y ++ + G+ + +L DM
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ + PD ++ I+ + +L E + +EM Q IS D TY+++ + +
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEM-IQRGISPDTVTYTSLIDGFCKENQL 368
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
+KA NH++ S G + F L CK L
Sbjct: 369 DKA--------------------NHMLDLMVSKGCGPNIRTFNILINGYCKANL------ 402
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
+++ ++ + L D N ++ G+ + G +E A + +E+V +
Sbjct: 403 ----------IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR 452
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFE 405
P S+ I+ G D EKA E
Sbjct: 453 VRPDIVSYKILLDGLCDNGEPEKALE 478
>gi|357449339|ref|XP_003594946.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359380|gb|ABN05846.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483994|gb|AES65197.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 100/446 (22%), Positives = 192/446 (43%), Gaps = 42/446 (9%)
Query: 15 NFTKTNLEIFTRAYR-AVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQ 73
NF N+++ ++ VK + R + YS S L D + PV +++ L+ + +
Sbjct: 192 NFGSENMKVDDQSVEFMVKMLGRESQYSIASKLFD----IIPV-EEYSLDVKACT----- 241
Query: 74 RVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE 133
V+ ++K A+++ E M GL ++ + V LD+ GK + A + L DE
Sbjct: 242 TVLHAYARTGKYKRAIEIFEKMKETGLDPTLVTYNVMLDVYGK---MGRAWSMILELLDE 298
Query: 134 DKVDKLYGALLNCYV------REGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQ 187
+ L C REG++DE+ +K G YN ++ ++ G
Sbjct: 299 MRSKGLEFDEFTCTTVISACGREGILDEARRFFDDLKLNGYKPGTATYNSMLQVFGKAGV 358
Query: 188 HEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYS 247
+ + ++L +M++N PD +Y + +Y V+ M S+ + + TY+
Sbjct: 359 YTEALNILKEMEDNNCEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKG-VMPNAITYT 417
Query: 248 TVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKI 307
TV N Y AG +KA+ + +++ + YN+++ ++M+ KI
Sbjct: 418 TVINAYGKAGDADKALEVFGQMKEL-GCVPNVCTYNNVLVLLGKRSRSEDMI------KI 470
Query: 308 KCKKQLN---RDYI---TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQ 361
C +LN D I TML + G+ + ++L E + + D N ++ Y +
Sbjct: 471 LCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAYGR 530
Query: 362 KGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWR 421
G + E+V G TP +++ + A + N + A E++ + K ++
Sbjct: 531 CGSEVDVAKMYGEMVAAGFTPCITTYNALLNALARRGNWKAA-----ESVVLDMRKKGFK 585
Query: 422 PKPSLVSSILDWL---GDNRDVEEVE 444
P + S +L G+ R +E+VE
Sbjct: 586 PNETSYSLLLHCYSKAGNVRGLEKVE 611
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 139/342 (40%), Gaps = 70/342 (20%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ++N Y + G D++L + +MKE+G + YN ++ L + E + +L DMK
Sbjct: 416 YTTVINAYGKAGDADKALEVFGQMKELGCVPNVCTYNNVLVLLGKRSRSEDMIKILCDMK 475
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYY------ 253
NG PPD ++ + G + + + VL+EM++ D T++T+ + Y
Sbjct: 476 LNGCPPDRITWNTMLAVCGEKGKQKFVSQVLREMKN-CGFEPDKETFNTLISAYGRCGSE 534
Query: 254 ----------IIAGLKEKAIIY------------LKKCEDIVSKSK------DALGYNHL 285
+ AG Y K E +V + + Y+ L
Sbjct: 535 VDVAKMYGEMVAAGFTPCITTYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLL 594
Query: 286 ISHYASLGN-----KDEMMKFWG-------------LQKIKCK--KQLNRDYI------- 318
+ Y+ GN K EM + G L KC+ K + R +
Sbjct: 595 LHCYSKAGNVRGLEKVEMEIYDGHVFPSWMLLRTLVLTNYKCRQLKGMERAFHQLQNNGY 654
Query: 319 --------TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADA 370
+ML V+ +LE+A +ML+ +S + N ++ Y++ G KA+
Sbjct: 655 KLDMVVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEE 714
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
+LK+I G +P S++ + G+ K +++A + E A
Sbjct: 715 MLKDIQNSGISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTA 756
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 143/329 (43%), Gaps = 23/329 (6%)
Query: 94 WMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVD------KLYGALLNCY 147
W++ V D +V+ + K+ G ES + + L D V+ K +L+ Y
Sbjct: 190 WLNFGSENMKVDDQSVEF--MVKMLGRESQYSIASKLFDIIPVEEYSLDVKACTTVLHAY 247
Query: 148 VREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQH-EKIPDVLLDMKENGVPPD 206
R G ++ + +KMKE G + + YN ++ +Y G+ I ++L +M+ G+ D
Sbjct: 248 ARTGKYKRAIEIFEKMKETGLDPTLVTYNVMLDVYGKMGRAWSMILELLDEMRSKGLEFD 307
Query: 207 NFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYL 266
F+ I++ G L +++ + TY+++ + AG+ +A+ L
Sbjct: 308 EFTCTTVISACGREGILDEARRFFDDLKLNGY-KPGTATYNSMLQVFGKAGVYTEALNIL 366
Query: 267 KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVK 326
K+ ED + DA+ YN L++ Y G DE K Y T++ + K
Sbjct: 367 KEMED-NNCEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKGVMPNAITYTTVINAYGK 425
Query: 327 IGELEEAEKMLEEW-ELSCYCYDFRVPNI-----ILLGYSQKGMIEKADAVLKEIVKKGK 380
G+ ++A ++ + EL C VPN+ +L+ ++ E +L ++ G
Sbjct: 426 AGDADKALEVFGQMKELGC------VPNVCTYNNVLVLLGKRSRSEDMIKILCDMKLNGC 479
Query: 381 TPTPNSWSIIAAGYADKNNMEKAFECMKE 409
P +W+ + A +K + + ++E
Sbjct: 480 PPDRITWNTMLAVCGEKGKQKFVSQVLRE 508
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 119/277 (42%), Gaps = 18/277 (6%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ L++ Y R G + + +M G YN ++ G + V+LDM+
Sbjct: 521 FNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNALLNALARRGNWKAAESVVLDMR 580
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEME-SQSHISMDWGTYST-VANYYIIAG 257
+ G P+ SY + ++ Y + +E V EME H+ W T V Y
Sbjct: 581 KKGFKPNETSYSLLLHCYSKAGNVRGLEKV--EMEIYDGHVFPSWMLLRTLVLTNYKCRQ 638
Query: 258 LK--EKAIIYLKKCEDIVSKSKDALGYNHLISHYA---SLGNKDEMMKFWGLQKIKCKKQ 312
LK E+A L+ D + N ++S + L EM+ + + Q
Sbjct: 639 LKGMERAFHQLQN----NGYKLDMVVINSMLSMFVRNQKLEKAHEMLDVIHVSGL----Q 690
Query: 313 LNR-DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAV 371
N Y +++ ++G+ +AE+ML++ + S D N ++ G+ +KG++++A +
Sbjct: 691 PNLVTYNSLIDLYARVGDCWKAEEMLKDIQNSGISPDVVSYNTVIKGFCKKGLVQEAIRI 750
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMK 408
L E+ G P P +++ + YA +A E ++
Sbjct: 751 LSEMTANGVQPCPITFNTFMSCYAGNGLFAEADEVIR 787
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 124/273 (45%), Gaps = 16/273 (5%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ALLN R G + S++ M++ G + +Y+ ++ Y+ G + V +++
Sbjct: 556 YNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLLHCYSKAGNVRGLEKVEMEIY 615
Query: 200 ENGVPPDNFSYR-ICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
+ V P R + + +Y R +L ME ++++ + +D +++ + ++
Sbjct: 616 DGHVFPSWMLLRTLVLTNYKCR-QLKGMERAFHQLQNNGY-KLDMVVINSMLSMFVRNQK 673
Query: 259 KEKAIIYLKKCEDIVSKS---KDALGYNHLISHYASLGN---KDEMMKFWGLQKIKCKKQ 312
EKA L D++ S + + YN LI YA +G+ +EM+K +Q
Sbjct: 674 LEKAHEML----DVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLK--DIQNSGISPD 727
Query: 313 LNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
+ Y T++ K G ++EA ++L E + N + Y+ G+ +AD V+
Sbjct: 728 V-VSYNTVIKGFCKKGLVQEAIRILSEMTANGVQPCPITFNTFMSCYAGNGLFAEADEVI 786
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
+ +++ G P ++ I+ GY ++A +
Sbjct: 787 RYMIEHGCMPNELTYKIVIDGYIKAKKHKEAMD 819
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 71/158 (44%), Gaps = 6/158 (3%)
Query: 64 GQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESA 123
G K+ + + ++ ++ + A ++ + + GL ++ + +DL +V A
Sbjct: 653 GYKLDMVVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKA 712
Query: 124 ETYF----NSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM 179
E NS D V Y ++ + ++GLV E++ ++ +M G + +N M
Sbjct: 713 EEMLKDIQNSGISPDVVS--YNTVIKGFCKKGLVQEAIRILSEMTANGVQPCPITFNTFM 770
Query: 180 CLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSY 217
Y G + +V+ M E+G P+ +Y+I I+ Y
Sbjct: 771 SCYAGNGLFAEADEVIRYMIEHGCMPNELTYKIVIDGY 808
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 92/206 (44%), Gaps = 25/206 (12%)
Query: 77 RQLRSRKRFKHALQVSEW-----MSGQGLAFSVHDHAVQ-----LDLIGKVRGLESAETY 126
RQL+ +R H LQ + + + L+ V + ++ LD+I V GL+
Sbjct: 637 RQLKGMERAFHQLQNNGYKLDMVVINSMLSMFVRNQKLEKAHEMLDVI-HVSGLQPNLVT 695
Query: 127 FNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTG 186
+NSL D LY + +C+ E +++ ++ G ++YN ++ + G
Sbjct: 696 YNSLID------LYARVGDCWKAE-------EMLKDIQNSGISPDVVSYNTVIKGFCKKG 742
Query: 187 QHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTY 246
++ +L +M NGV P ++ ++ Y + + V++ M + + TY
Sbjct: 743 LVQEAIRILSEMTANGVQPCPITFNTFMSCYAGNGLFAEADEVIRYMIEHGCMPNEL-TY 801
Query: 247 STVANYYIIAGLKEKAIIYLKKCEDI 272
V + YI A ++A+ ++ K ++I
Sbjct: 802 KIVIDGYIKAKKHKEAMDFVSKIKEI 827
>gi|255660914|gb|ACU25626.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 481
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 93/433 (21%), Positives = 183/433 (42%), Gaps = 34/433 (7%)
Query: 79 LRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLI---GKVRGLESAETYFNSLN---- 131
L + K +HALQ W+ L F HD L +I G+ L A +
Sbjct: 19 LHAAKTSEHALQFFRWVERSNL-FE-HDRETHLKIIEILGRASKLNHARCILLDMPKKGL 76
Query: 132 --DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHE 189
DED ++ +++ Y + G+V ES+ L QKM+E+G + +Y+ + + G+
Sbjct: 77 EWDED----MWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVIMRRGRFM 132
Query: 190 KIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTV 249
M G+ P ++ + I + ++ + ++M+S+ IS D TY+T+
Sbjct: 133 MAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKMDTAMRFFEDMKSR-EISPDVVTYNTM 191
Query: 250 AN-YYIIAGLKEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKI 307
N Y + + E +++ K ++I + Y LI Y S+ + ++ K
Sbjct: 192 INGCYRVKKMDEAEKYFVEMKGKNI---EPTVVTYTTLIKGYVSVDQVHDALRLVEEMKG 248
Query: 308 KCKKQLNRDYITMLGSLVKIGELEEAEKMLEEW-ELSCYCYDFRVPNIILLGYSQKGMIE 366
K Y T+L L G++ EA+ +L+E + D + ++ + G ++
Sbjct: 249 YGIKPNAITYSTLLPGLCNAGKMSEAQSILKEMVDKYIAPKDNSIFMRLISSQCEAGNLD 308
Query: 367 KADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPK--- 423
A VLK +++ + ++ + ++A + + + + E++ RP+
Sbjct: 309 AAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQHDRAVKLLDKLI---EKDIILRPQSTL 365
Query: 424 ---PSLVSSILDWLGDNRDVEEVEAFVSS-LKIKVQKRNMYHALTEAHIRSGQEVDG--L 477
PS + ++++L N + EA V LK+ VQ + L + + G L
Sbjct: 366 HMEPSAYNPMIEYLCSNGQTAKAEALVRQLLKLGVQDTTALNTLIRGYAQEGSPDSAFEL 425
Query: 478 LESMKADDIDEDK 490
L+ M +D +K
Sbjct: 426 LKIMLRRKVDSEK 438
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 150/356 (42%), Gaps = 54/356 (15%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSL---NDEDKVDKLYGALL 144
A++ E M + ++ V + ++ +V+ ++ AE YF + N E V Y L+
Sbjct: 169 AMRFFEDMKSREISPDVVTYNTMINGCYRVKKMDEAEKYFVEMKGKNIEPTV-VTYTTLI 227
Query: 145 NCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVP 204
YV V ++L L+++MK G +A+ Y+ ++ N G+ + +L +M + +
Sbjct: 228 KGYVSVDQVHDALRLVEEMKGYGIKPNAITYSTLLPGLCNAGKMSEAQSILKEMVDKYIA 287
Query: 205 P-DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAI 263
P DN + I+S L + +VL+ M S + + G Y + + AG ++A+
Sbjct: 288 PKDNSIFMRLISSQCEAGNLDAAADVLKAMIRLS-VPTEAGHYGVLIENFCKAGQHDRAV 346
Query: 264 IYLKKC--EDIVSKSKDAL-----GYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
L K +DI+ + + L YN +I + S G Q K +
Sbjct: 347 KLLDKLIEKDIILRPQSTLHMEPSAYNPMIEYLCSNG-----------QTAKAE------ 389
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
++ L+K+G D N ++ GY+Q+G + A +LK ++
Sbjct: 390 --ALVRQLLKLG-----------------VQDTTALNTLIRGYAQEGSPDSAFELLKIML 430
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILD 432
++ +++ + Y KN A K AL EN P SL S+++
Sbjct: 431 RRKVDSEKSAYDALVQSYLKKNEPADA----KAALDSMIENDHL-PDSSLFRSVME 481
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 149/341 (43%), Gaps = 19/341 (5%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESA----ETYFNSL 130
+I L R A+++ E M G A +V + L K +E+A E
Sbjct: 50 MINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRG 109
Query: 131 NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEK 190
D V Y ++N + VDE+ +M KM + G + + Y ++ + G +
Sbjct: 110 CPPDVVS--YTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDG 167
Query: 191 IPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVA 250
+++ M E G P+ +Y ++ + +L S + +EME D TYST+
Sbjct: 168 AVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIV 227
Query: 251 NYYIIAGLKEKAIIYLKKCEDIVSK--SKDALGYNHLISHYASLGNKDEMMKFWGLQKIK 308
+ + +G + A + E +VSK S + + Y+ L+ G DE LQ++
Sbjct: 228 DSLVKSGKVDDAC---RLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATAL--LQRMT 282
Query: 309 ---CKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL-GYSQKGM 364
C + Y T++ K+G ++EA +LEE + C V +LL + + G
Sbjct: 283 RSGCSPNI-VTYNTIIDGHCKLGRIDEAYHLLEEM-VDGGCQPNVVTYTVLLDAFCKCGK 340
Query: 365 IEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
E A +++ +V+KG P +++ + + K+ +E+A +
Sbjct: 341 AEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQ 381
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 131/277 (47%), Gaps = 15/277 (5%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ++N + +D+++ L+++M + G + +YN ++ + + E +L M
Sbjct: 47 YNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMV 106
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G PPD SY IN ++ V+ +M Q + TY T+ + + G
Sbjct: 107 MRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKM-IQRGCQPNVITYGTLVDGFCRVGDL 165
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWG--LQKIKCKKQLNRDY 317
+ A+ ++K + +A+ YN+++ S D ++ + + C + Y
Sbjct: 166 DGAVELVRKMTE-RGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDV-FTY 223
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNII-----LLGYSQKGMIEKADAVL 372
T++ SLVK G++++A +++E +S C PN++ L G + G +++A A+L
Sbjct: 224 STIVDSLVKSGKVDDACRLVEAM-VSKGCS----PNVVTYSSLLHGLCKAGKLDEATALL 278
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
+ + + G +P +++ I G+ +++A+ ++E
Sbjct: 279 QRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEE 315
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/303 (19%), Positives = 132/303 (43%), Gaps = 22/303 (7%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y LL+ + + G ++++ L++ M E G + YN ++ ++ + E+ +L M
Sbjct: 328 YTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMI 387
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN-----YYI 254
+ G P+ SY I +++ +L++M S + + D T++T+ + Y +
Sbjct: 388 QKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVP-DIVTFNTIIDAMCKTYRV 446
Query: 255 IAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN 314
+ +I C + + + YN L+ D+ + L+++ K+ +
Sbjct: 447 DIAYELFNLIQESGC------TPNLVTYNSLVHGLCKSRRFDQAE--YLLREMTRKQGCS 498
Query: 315 RDYI---TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAV 371
D I T++ L K ++ A K+ + D +I++ + +++A+ V
Sbjct: 499 PDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNV 558
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSIL 431
L+ ++K G P ++ + G+ N++KA E ++ L+ K P S +
Sbjct: 559 LELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLS-----KGSYPDVVTFSIFI 613
Query: 432 DWL 434
DWL
Sbjct: 614 DWL 616
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 147/337 (43%), Gaps = 17/337 (5%)
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YG 141
R A + E M G +V + V LD K E A + ++ V L Y
Sbjct: 305 RIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYN 364
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMC-LYTNTGQHEKIPDVLLDMKE 200
+LL+ + ++ V+ + L+ M + G + ++YN ++ L T HE + +L M
Sbjct: 365 SLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVL-LLEQMLS 423
Query: 201 NGVPPDNFSYRICINSYGA--RSELS-SMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
N PD ++ I++ R +++ + N++QE S + + TY+++ + +
Sbjct: 424 NNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQE----SGCTPNLVTYNSLVHGLCKSR 479
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
++A L++ S D + YN +I D K + LQ + L D
Sbjct: 480 RFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLF-LQMLS--DGLAPDD 536
Query: 318 IT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
+T ++ SL K ++EA +LE + + ++ G+ + G ++KA +L+
Sbjct: 537 VTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQL 596
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
++ KG P ++SI + + + +A E ++ L
Sbjct: 597 LLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETML 633
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 79/182 (43%), Gaps = 3/182 (1%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSL--ND 132
VI L KR A ++ M GLA +++ + + K R ++ A + N
Sbjct: 507 VIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNG 566
Query: 133 EDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
D YG L++ + + G +D++L ++Q + GS+ + ++ + + G+ +
Sbjct: 567 FDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAG 626
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
++L M G+ PD +Y + + S ++ + M Q D TY+T+ +
Sbjct: 627 ELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMR-QCGCEPDNATYTTLVGH 685
Query: 253 YI 254
+
Sbjct: 686 LV 687
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 126/303 (41%), Gaps = 22/303 (7%)
Query: 190 KIPDVLLDMKE--NGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYS 247
+ D +L +E PPD+ +Y IN L +L+EM + + +Y+
Sbjct: 25 QCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNG-FAPNVFSYN 83
Query: 248 TVANYYIIAGLKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWG-L 304
TV + + A E A+ L E +V + D + Y +I+ L DE + +
Sbjct: 84 TVLHGFCKANRVENALWLL---EQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKM 140
Query: 305 QKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGM 364
+ C+ + Y T++ ++G+L+ A +++ + Y + N I+ G
Sbjct: 141 IQRGCQPNV-ITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRK 199
Query: 365 IEKADAVLKEIVKKGKTPTPN--SWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRP 422
++ A + KE+ + G P P+ ++S I ++ A + EA+ +K P
Sbjct: 200 LDSALQLFKEMEESGSCP-PDVFTYSTIVDSLVKSGKVDDACR-LVEAMV----SKGCSP 253
Query: 423 KPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNM--YHALTEAHIRSGQ--EVDGLL 478
SS+L L ++E A + + N+ Y+ + + H + G+ E LL
Sbjct: 254 NVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLL 313
Query: 479 ESM 481
E M
Sbjct: 314 EEM 316
>gi|326529783|dbj|BAK04838.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 490
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 124/268 (46%), Gaps = 9/268 (3%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +LL C+ +E+L L+ + G A++Y+ I+ + + G+ + D+L M
Sbjct: 137 YSSLLQCFCDMKRTEEALDLLLH-RVSGDLPDAISYSVILKSFCDDGRSQCALDLLRMMA 195
Query: 200 ENGV--PPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
E G P SY + I+ + E+S ++ M Q ++ D TY++V N A
Sbjct: 196 EKGAEHSPSVVSYNLVIHGFFKEGEISKACHLFHGMIQQGYVP-DVVTYNSVINALCKAR 254
Query: 258 LKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR 315
+KA + L+ +V S DA+ YN LI Y LG E + + + +
Sbjct: 255 AMDKAEVVLRS---MVHNSVQPDAVTYNSLIHGYLILGQLKETFRLLKVMRSQGVMPSLV 311
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
+++ L K G+++EAE+M ++ D + +I+L GY+ +G + K + + +
Sbjct: 312 TCSSVMDYLCKHGKIKEAEEMFYSRAVNGRKPDIVLYSIMLHGYAIEGSLVKMIDLCEVM 371
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKA 403
+ G P ++I+ YA M+ A
Sbjct: 372 ARDGVVPDLPCFNILINAYAKYGMMDVA 399
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 126/287 (43%), Gaps = 30/287 (10%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGS--FGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
Y +L + +G +L L++ M E G+ S ++YN ++ + G+ K +
Sbjct: 171 YSVILKSFCDDGRSQCALDLLRMMAEKGAEHSPSVVSYNLVIHGFFKEGEISKACHLFHG 230
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
M + G PD +Y IN+ + E VL+ M S + D TY+++ + Y+I G
Sbjct: 231 MIQQGYVPDVVTYNSVINALCKARAMDKAEVVLRSMVHNS-VQPDAVTYNSLIHGYLILG 289
Query: 258 LKEKAIIYLKKCEDIVSKSKDAL----GYNHLISHYASLGNKDEMMKFWGLQKIKCKKQL 313
++ LK V +S+ + + ++ + G E + + + + +K
Sbjct: 290 QLKETFRLLK-----VMRSQGVMPSLVTCSSVMDYLCKHGKIKEAEEMFYSRAVNGRKPD 344
Query: 314 NRDYITML------GSLVKIGELEEAEKMLEEW---ELSCYCYDFRVPNIILLGYSQKGM 364
Y ML GSLVK+ +L E M + +L C+ NI++ Y++ GM
Sbjct: 345 IVLYSIMLHGYAIEGSLVKMIDL--CEVMARDGVVPDLPCF-------NILINAYAKYGM 395
Query: 365 IEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
++ A ++++K+G P ++ + + + M+ A E E +
Sbjct: 396 MDVAMLFFEDMLKQGVKPNEFTYLTVISAFCKMGRMDDAMEKFSEMI 442
>gi|297832604|ref|XP_002884184.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330024|gb|EFH60443.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 829
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 161/373 (43%), Gaps = 56/373 (15%)
Query: 71 ELQRVIRQLRSRKRFKHALQVSEWM--SGQGLAFSVHDHAVQLDLIGKVRGLESAETYFN 128
+L +++ L ++ A+ + EW+ S A + H +++ + ++ G ES +
Sbjct: 145 DLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHHVIEI--LVRILGRESQYSVAA 202
Query: 129 SLNDEDKVD------KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLY 182
L D+ + + Y +L+ Y R G +++++L ++MKEMG + + YN I+ ++
Sbjct: 203 KLLDKIPLQDYMLDVRAYTTILHAYSRTGKYEKAINLFERMKEMGPSPTLVTYNVILDVF 262
Query: 183 TNTGQH-EKIPDVLLDMKENGVPPDNF--------------------------------- 208
G+ KI VL +M+ G+ D F
Sbjct: 263 GKMGRSWRKILGVLEEMRSKGLKFDEFTCSTVLSACAREGLLREAKDFFAELKSCGYEPG 322
Query: 209 --SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYL 266
+Y + +G + +VL+EME +++ D TY+ + Y AG ++A + +
Sbjct: 323 TVTYNALLQVFGKAGVYTEALSVLKEME-ENNCPADSVTYNELVAAYARAGFSKEAAVVI 381
Query: 267 KKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMK-FWGLQKIKCKKQLNRDYITMLGS 323
E + K +A+ Y +I Y G +DE +K F+ +++ C Y +L
Sbjct: 382 ---EMMTQKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPN-TCTYNAVLSM 437
Query: 324 LVKIGELEEAEKMLEEWELSCYCYDFRVP-NIILLGYSQKGMIEKADAVLKEIVKKGKTP 382
L K E KML + + S C+ R N IL KGM + + V +E+ G P
Sbjct: 438 LGKKSRSNEMIKMLCDMK-SNGCFPNRATWNTILALCGNKGMDKFVNRVFREMKSCGFEP 496
Query: 383 TPNSWSIIAAGYA 395
++++ + + Y
Sbjct: 497 DRDTFNTLISAYG 509
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 145/325 (44%), Gaps = 16/325 (4%)
Query: 83 KRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLND--EDKVDKLY 140
+ ++ L V E M +GL F + L + L A+ +F L + Y
Sbjct: 267 RSWRKILGVLEEMRSKGLKFDEFTCSTVLSACAREGLLREAKDFFAELKSCGYEPGTVTY 326
Query: 141 GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKE 200
ALL + + G+ E+LS++++M+E ++ YN ++ Y G ++ V+ M +
Sbjct: 327 NALLQVFGKAGVYTEALSVLKEMEENNCPADSVTYNELVAAYARAGFSKEAAVVIEMMTQ 386
Query: 201 NGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKE 260
GV P+ +Y I++YG + + M+ + + TY+ V + + G K
Sbjct: 387 KGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVP-NTCTYNAVLS---MLGKKS 442
Query: 261 KAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWG--LQKIK-CKKQLNR 315
++ +K D+ S + +N ++ A GNK M KF +++K C + +R
Sbjct: 443 RSNEMIKMLCDMKSNGCFPNRATWNTIL---ALCGNKG-MDKFVNRVFREMKSCGFEPDR 498
Query: 316 D-YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
D + T++ + + G +A KM E + + N +L ++KG + V+ +
Sbjct: 499 DTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISD 558
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNN 399
+ KG PT S+S++ YA N
Sbjct: 559 MKSKGFKPTETSYSLMLQCYAKGGN 583
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 156/395 (39%), Gaps = 73/395 (18%)
Query: 86 KHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGAL 143
K A V E M+ +G+ + + +D GK + A F S+ + V Y A+
Sbjct: 375 KEAAVVIEMMTQKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAV 434
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
L+ ++ +E + ++ MK G F + +N I+ L N G + + V +MK G
Sbjct: 435 LSMLGKKSRSNEMIKMLCDMKSNGCFPNRATWNTILALCGNKGMDKFVNRVFREMKSCGF 494
Query: 204 PPDNFSYRICINSYGA-----------------------------------RSELSSMEN 228
PD ++ I++YG + + S EN
Sbjct: 495 EPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGEN 554
Query: 229 VLQEMES------QSHISMDWGTYSTVANYYIIA----GLKEKAI----IYLKKCEDIVS 274
V+ +M+S ++ S+ Y+ NY I G+ E I + L+
Sbjct: 555 VISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIEEGINEGQIFPSWMLLRTLLLANF 614
Query: 275 KSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQ----------------LNRDYI 318
K + G + + G K +M+ F + I + LN D +
Sbjct: 615 KCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLV 674
Query: 319 T---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
T ++ V+ GE +AE++L+ E S D N ++ G+ +KG++++A +L E+
Sbjct: 675 TYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLSEM 734
Query: 376 VKKGKTPTPNSWSIIAAGYADK---NNMEKAFECM 407
++G P +++ +GY +E ECM
Sbjct: 735 TERGIRPCIFTYNTFVSGYTAMGMYGEIEDVIECM 769
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 86/195 (44%), Gaps = 6/195 (3%)
Query: 116 KVRGLESAETYFNSLNDED-KVDK-LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
K R L +E F K D ++ ++L+ + R + D++ ++Q + E G +
Sbjct: 615 KCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLV 674
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
YN +M +Y G+ K ++L ++++ + PD SY I + + + +L EM
Sbjct: 675 TYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLSEM 734
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLG 293
++ I TY+T + Y G+ + I + +C + L + ++ Y G
Sbjct: 735 -TERGIRPCIFTYNTFVSGYTAMGMYGE-IEDVIECMAKNDCRPNELTFKMVVDGYCRAG 792
Query: 294 NKDEMMKFWGLQKIK 308
E M F + KIK
Sbjct: 793 KYSEAMDF--VSKIK 805
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 11/132 (8%)
Query: 97 GQGLAFSVHDHAVQLDLIGK-------VRGLES--AETYFNSLNDEDKVDKL--YGALLN 145
+G+ S+H+ + DL+ VR E AE +L L Y ++
Sbjct: 657 AEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIK 716
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
+ R+GL+ E++ ++ +M E G YN + YT G + +I DV+ M +N P
Sbjct: 717 GFCRKGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMYGEIEDVIECMAKNDCRP 776
Query: 206 DNFSYRICINSY 217
+ ++++ ++ Y
Sbjct: 777 NELTFKMVVDGY 788
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 114/304 (37%), Gaps = 43/304 (14%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ L++ Y R G ++ + +M G YN ++ G +V+ DMK
Sbjct: 501 FNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMK 560
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTV--ANYYI--I 255
G P SY + + Y +E + +E ++ I W T+ AN+ +
Sbjct: 561 SKGFKPTETSYSLMLQCYAKGGNYLGIERI-EEGINEGQIFPSWMLLRTLLLANFKCRAL 619
Query: 256 AGLKEKAIIYLKK-------------------------CEDIVSK------SKDALGYNH 284
AG E+A KK E I+ + D + YN
Sbjct: 620 AG-SERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNS 678
Query: 285 LISHYASLG---NKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWE 341
L+ Y G +E++K L+K + K L Y T++ + G ++EA +ML E
Sbjct: 679 LMDMYVRRGECWKAEEILK--TLEKSQLKPDL-VSYNTVIKGFCRKGLMQEAVRMLSEMT 735
Query: 342 LSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNME 401
N + GY+ GM + + V++ + K P ++ ++ GY
Sbjct: 736 ERGIRPCIFTYNTFVSGYTAMGMYGEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYS 795
Query: 402 KAFE 405
+A +
Sbjct: 796 EAMD 799
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/371 (21%), Positives = 155/371 (41%), Gaps = 37/371 (9%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
++R L + K A++V + M + V + + ++ + G+ A + + D
Sbjct: 210 ILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRG 269
Query: 135 KVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+ Y L+N +EG +DE++ + M G + + +N I+ +TG+
Sbjct: 270 CTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAE 329
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
+L DM G P ++ I IN + L ++L++M + +Y+ + +
Sbjct: 330 KLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHG-CQPNSLSYNPLLHG 388
Query: 253 YIIAGLKEKAIIYLKK-----C-EDIVS------------KSKDA--------------- 279
+ ++AI YL++ C DIV+ K +DA
Sbjct: 389 FCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPV 448
Query: 280 -LGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLE 338
+ YN +I A G + +K + K K Y +++G L + G+++EA K
Sbjct: 449 LITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFH 508
Query: 339 EWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKN 398
E+E + N I+LG + ++A L ++ +G PT S++I+ G A +
Sbjct: 509 EFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEG 568
Query: 399 NMEKAFECMKE 409
++A E + E
Sbjct: 569 MAKEALELLNE 579
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 76/381 (19%), Positives = 161/381 (42%), Gaps = 49/381 (12%)
Query: 148 VREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDN 207
VR G ++E ++ M G+ + ++ + G+ K +L ++ +G PD
Sbjct: 113 VRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDV 172
Query: 208 FSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLK 267
+Y + I+ Y E+++ +VL M +S D TY+T+ +G ++A+ L
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRMS----VSPDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 268 K-----C-EDIVS----------------------------KSKDALGYNHLISHYASLG 293
+ C D+++ + D + YN L++ G
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288
Query: 294 NKDEMMKFWG-LQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVP 352
DE +KF + C+ + I +L S+ G +AEK+L + +
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNI-ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347
Query: 353 NIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
NI++ +KG++ +A +L+++ K G P S++ + G+ + M++A E ++ ++
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407
Query: 413 VHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNM--YHALTEAHIRS 470
+ P +++L L + VE+ ++ L K + Y+ + + ++
Sbjct: 408 -----RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 462
Query: 471 GQEVDG--LLESMKADDIDED 489
G+ LL+ M+A D+ D
Sbjct: 463 GKTGKAIKLLDEMRAKDLKPD 483
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 113/244 (46%), Gaps = 10/244 (4%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ L+N R+GL+ ++ +++KM + G ++L+YN ++ + + ++ + L M
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 406
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G PD +Y + + ++ +L ++ S+ S TY+TV + AG
Sbjct: 407 SRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG-CSPVLITYNTVIDGLAKAGKT 465
Query: 260 EKAIIYLK--KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWG-LQKIKCKKQLNRD 316
KAI L + +D+ D + Y+ L+ + G DE +KF+ +++ +
Sbjct: 466 GKAIKLLDEMRAKDL---KPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTF 522
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL-GYSQKGMIEKADAVLKEI 375
MLG L K + + A L + ++ C IL+ G + +GM ++A +L E+
Sbjct: 523 NSIMLG-LCKTRQTDRAIDFLV-YMINRGCKPTETSYTILIEGLAYEGMAKEALELLNEL 580
Query: 376 VKKG 379
KG
Sbjct: 581 CNKG 584
>gi|224111048|ref|XP_002315730.1| predicted protein [Populus trichocarpa]
gi|222864770|gb|EEF01901.1| predicted protein [Populus trichocarpa]
Length = 760
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 126/282 (44%), Gaps = 16/282 (5%)
Query: 67 ISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETY 126
+ E + V L ++ HALQ W+ GL HD + +I ++ G S +
Sbjct: 110 VPEFDHSLVYNVLHGARKPDHALQFFRWVERAGLI--QHDRETHMKII-QILGRYSMLNH 166
Query: 127 FNSLNDEDKVDK-------LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM 179
+ ED K ++ L++ Y + G+V ES+ + KMKE+G S +YN +
Sbjct: 167 ARCIVLEDMPKKGFELDEDMFVLLIDSYGKAGIVQESVKMFSKMKELGVERSVKSYNALF 226
Query: 180 CLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHI 239
+ G++ M + G+ P +Y + I + L + ++M+ + I
Sbjct: 227 KVIVRKGRYMMAKRFFNKMLDEGIGPTRHTYNVLIWGFFLSMRLRTAVRFYEDMKVRG-I 285
Query: 240 SMDWGTYSTVAN-YYIIAGLKEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDE 297
S D TY+T+ N YY ++E ++ + K +DI + + Y +I Y ++ ++
Sbjct: 286 SPDVVTYNTMINGYYRHKRMEEAEKLFAEMKAKDI---APTVISYTTMIKGYFAVDRIND 342
Query: 298 MMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEE 339
++ K K N Y T+L L G++ EA+ +L+E
Sbjct: 343 GLRLLEEMKSVGIKPNNVTYTTLLPDLCDAGKMTEAKDILKE 384
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/344 (20%), Positives = 139/344 (40%), Gaps = 53/344 (15%)
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YG 141
R + A++ E M +G++ V + ++ + + +E AE F + +D + Y
Sbjct: 269 RLRTAVRFYEDMKVRGISPDVVTYNTMINGYYRHKRMEEAEKLFAEMKAKDIAPTVISYT 328
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
++ Y +++ L L+++MK +G + + Y ++ + G+ + D+L +M
Sbjct: 329 TMIKGYFAVDRINDGLRLLEEMKSVGIKPNNVTYTTLLPDLCDAGKMTEAKDILKEMVRR 388
Query: 202 GVPP-DNFSYRICINSYGARSELSSMENVLQEM--------------------------- 233
+ P DN + +NS +L + +VL M
Sbjct: 389 RIAPKDNSIFLKLLNSQCKAGDLKAAVDVLDGMIKLSIPSEAGHYGVLIENFCKAEEYDQ 448
Query: 234 ---------------ESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKD 278
QS + M+ G Y+ V Y G KA I ++ + +D
Sbjct: 449 AVKFVDKLIENDIILRPQSTLEMESGAYNPVIQYLCSHGQTGKAEILFRQL--LKKGVED 506
Query: 279 ALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD---YITMLGSLVKIGELEEAEK 335
L +N+LI +A G D + KI +K + RD Y ++ S ++ GE +A+
Sbjct: 507 PLAFNNLICGHAKEGTPDSAFEIL---KIMGRKGIPRDADAYRLLIESYLRKGEPADAKT 563
Query: 336 MLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
L+ + D V ++ + G ++ A V+K +V+KG
Sbjct: 564 ALDSMIEDGHLPDSSVFRSVMESLYEDGRVQTASRVMKSMVEKG 607
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 105/245 (42%), Gaps = 33/245 (13%)
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQE 232
L +N ++C + G + ++L M G+P D +YR+ I SY + E + + L
Sbjct: 508 LAFNNLICGHAKEGTPDSAFEILKIMGRKGIPRDADAYRLLIESYLRKGEPADAKTALDS 567
Query: 233 MESQSHISMDWGTYSTVANYY----------IIAGLKEKAIIYLKKCEDIVSKSKDAL-- 280
M H+ S + + Y ++ + EK + K+ D+V+K +AL
Sbjct: 568 MIEDGHLPDSSVFRSVMESLYEDGRVQTASRVMKSMVEKGV---KENMDLVAKILEALLM 624
Query: 281 -GYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEE 339
G+ +LG D +M Q N ++ ++L L + G+ A K+L +
Sbjct: 625 RGHEE-----EALGRIDLLM----------SSQCNVNFDSLLSILSEKGKTIAALKLL-D 668
Query: 340 WELSCYC-YDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKN 398
+ L C DF+ + +L G A ++L +I++KG + S+ + +
Sbjct: 669 FGLQRDCDIDFKSYDKVLDALLAAGKTLNAYSILCKIMEKGGVTSWRSYEDLIKSLNQEG 728
Query: 399 NMEKA 403
N ++A
Sbjct: 729 NTKQA 733
>gi|297830178|ref|XP_002882971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328811|gb|EFH59230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 642
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 154/356 (43%), Gaps = 10/356 (2%)
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESA-ETYFNSLNDEDKVDKLY-G 141
+ + AL + E M G + +V+ + + +GK +E A + Y N L D D ++
Sbjct: 283 KVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTDGLTPDVVFLN 342
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM-CLYTNTGQHEKIPDVLLDMKE 200
L+N + G ++E ++ +M + ++YN ++ L+ + ++ MK
Sbjct: 343 NLMNILGKVGRLEELTNVFNEMGTWRCTPTVVSYNTVIKALFESKAPVSEVSSWFDKMKA 402
Query: 201 NGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKE 260
+GV P F+Y I I+ Y + + +L+EM+ + Y ++ N A E
Sbjct: 403 DGVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCP-AAYCSLINALGKAKRYE 461
Query: 261 KAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITM 320
A K+ ++ + Y +I H+ G E + + K + Y +
Sbjct: 462 AANELFKELKENFGNVSSRV-YAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNAL 520
Query: 321 LGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGK 380
+ +VK G + EA +L + E + D NIIL G+++ G+ +A + + + G
Sbjct: 521 MSGMVKAGMVNEANSLLRKMEENGCTADINSHNIILNGFARTGVPRRAIEMFETMKHCGI 580
Query: 381 TPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGD 436
P +++ + +A E+A M+E ++K + SSILD +G+
Sbjct: 581 KPDGVTYNTLLGCFAHAGMFEEAARLMREM-----KDKGFEYDAITYSSILDAVGN 631
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 171/436 (39%), Gaps = 51/436 (11%)
Query: 18 KTNLEIFTRAYRAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKI--SELELQRV 75
+T E+ Y +V PV + L + LG + + + +G+K + V
Sbjct: 147 RTIQEVVRNTYVSVGPVVLSEL---VKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSV 203
Query: 76 IRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGL---ESAETYFNSLND 132
I L + + +V M +G F D LI L +SA F+ + D
Sbjct: 204 ILMLMQEGQHEKVHEVYTEMCNEGDCFP--DTITYSALISSYEKLGRNDSAIRLFDEMKD 261
Query: 133 E--DKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEK 190
+K+Y LL Y + G V+++L L ++MK G + Y ++ G+ E+
Sbjct: 262 NCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEE 321
Query: 191 IPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM----------------- 233
D+ +M +G+ PD +N G L + NV EM
Sbjct: 322 AYDLYKNMLTDGLTPDVVFLNNLMNILGKVGRLEELTNVFNEMGTWRCTPTVVSYNTVIK 381
Query: 234 ---ESQSHIS--MDW-------------GTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK 275
ES++ +S W TYS + + Y EKA++ L++ ++
Sbjct: 382 ALFESKAPVSEVSSWFDKMKADGVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFP 441
Query: 276 SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEK 335
A Y LI+ + + + K +R Y M+ K G+L EA
Sbjct: 442 PCPA-AYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVD 500
Query: 336 MLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYA 395
+ E + D N ++ G + GM+ +A+++L+++ + G T NS +II G+A
Sbjct: 501 LFNEMKNQGSGPDVYAYNALMSGMVKAGMVNEANSLLRKMEENGCTADINSHNIILNGFA 560
Query: 396 DKNNMEKA---FECMK 408
+A FE MK
Sbjct: 561 RTGVPRRAIEMFETMK 576
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 83/177 (46%), Gaps = 3/177 (1%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I L KR++ A ++ + + S +AV + GK L A FN + ++
Sbjct: 450 LINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQG 509
Query: 135 KVDKLYG--ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+Y AL++ V+ G+V+E+ SL++KM+E G ++N I+ + TG +
Sbjct: 510 SGPDVYAYNALMSGMVKAGMVNEANSLLRKMEENGCTADINSHNIILNGFARTGVPRRAI 569
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTV 249
++ MK G+ PD +Y + + +++EM+ + D TYS++
Sbjct: 570 EMFETMKHCGIKPDGVTYNTLLGCFAHAGMFEEAARLMREMKDKG-FEYDAITYSSI 625
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 81/215 (37%), Gaps = 47/215 (21%)
Query: 278 DALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKML 337
D + Y+ LIS Y LG D ++ + K C + + Y T+LG K+G
Sbjct: 232 DTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVG--------- 282
Query: 338 EEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADK 397
+EKA + +E+ + G +PT +++ + G
Sbjct: 283 --------------------------KVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKA 316
Query: 398 NNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL------K 451
+E+A++ K L P ++++++ LG +EE+ + +
Sbjct: 317 GRVEEAYDLYKNML-----TDGLTPDVVFLNNLMNILGKVGRLEELTNVFNEMGTWRCTP 371
Query: 452 IKVQKRNMYHALTEAHIRSGQEVDGLLESMKADDI 486
V + AL E+ EV + MKAD +
Sbjct: 372 TVVSYNTVIKALFESKA-PVSEVSSWFDKMKADGV 405
>gi|356517665|ref|XP_003527507.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Glycine max]
Length = 564
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 94/436 (21%), Positives = 172/436 (39%), Gaps = 63/436 (14%)
Query: 46 LGDPDVSLTPVLDQWVLEGQKISELELQRVIRQ---LRSRKRFKHALQVSEWMSG-QGLA 101
L PD+SL + IS RVI + +R F +L W S G
Sbjct: 119 LTIPDLSLA---FSAISAAHPISPSVAHRVIEKCGGVRHGIPFLQSLAFFNWSSSLDGFP 175
Query: 102 FSVHDHAVQLDLIGKVRGLESAETYFNSLNDE--DKVDKLYGALLNCYVREGLVDESLSL 159
S + LDL GK+R + A + + + + AL+ YVR GL E++
Sbjct: 176 ASPEPYNEMLDLAGKLRQFDLAWHVIDLMKSRGVEITVHTFSALVRRYVRAGLAAEAVHA 235
Query: 160 MQKMKEMG-------------------------SFGSALN---------YNGIMCLYTNT 185
+M++ G SF +L Y ++ +
Sbjct: 236 FNRMEDYGCTPDMVAFSIVISSLCKKRRANEAQSFFDSLKHRFEPDVVVYTSLVHGWCRA 295
Query: 186 GQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWG- 244
G K +V DMK G+ P+ ++Y I I+S +++ +V EM +D G
Sbjct: 296 GDISKAEEVFSDMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFSEM-------IDAGC 348
Query: 245 -----TYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMM 299
T++++ ++ AG EK + + + + + D + YN +I + N +E
Sbjct: 349 DPNAVTFNSLMRVHVKAGRTEKVLKVYNQMKRLGCPA-DTISYNFIIESHCRDENLEEAA 407
Query: 300 KFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEW-ELSCYCYDFRVPNIILLG 358
K L K + + G + K+ ++ A +M EL+C NI++
Sbjct: 408 KILNLMVKKGVAPNASTFNFIFGCIAKLHDVNGAHRMYARMKELNCQPNTLTY-NILMRM 466
Query: 359 YSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENK 418
+++ + + KE+ + P N++ I+ + + D + A++ M E + E K
Sbjct: 467 FAESRSTDMVLKMKKEMDESQVEPNVNTYRILISMFCDMKHWNNAYKLMMEMV----EEK 522
Query: 419 FWRPKPSLVSSILDWL 434
RP S+ ++L+ L
Sbjct: 523 CLRPNLSVYETVLELL 538
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 109/250 (43%), Gaps = 11/250 (4%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +++ R G + + + +M + G +A+ +N +M ++ G+ EK+ V MK
Sbjct: 320 YSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLKVYNQMK 379
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G P D SY I S+ L +L M + ++ + T++ + + IA L
Sbjct: 380 RLGCPADTISYNFIIESHCRDENLEEAAKILNLMVKKG-VAPNASTFNFI--FGCIAKLH 436
Query: 260 E---KAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWG-LQKIKCKKQLNR 315
+ +Y + E ++ + L YN L+ +A + D ++K + + + + +N
Sbjct: 437 DVNGAHRMYARMKE--LNCQPNTLTYNILMRMFAESRSTDMVLKMKKEMDESQVEPNVN- 493
Query: 316 DYITMLGSLVKIGELEEAEK-MLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
Y ++ + A K M+E E C + V +L + G ++K + ++ +
Sbjct: 494 TYRILISMFCDMKHWNNAYKLMMEMVEEKCLRPNLSVYETVLELLRKAGQLKKHEELVDK 553
Query: 375 IVKKGKTPTP 384
+V +G P
Sbjct: 554 MVARGFVTRP 563
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 144/333 (43%), Gaps = 44/333 (13%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+Y L+ +++ +++ ++++MKE G YN ++ + + ++ L++M
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM 513
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
ENG+ P+ F+Y I+ Y SE +S + ++EM + N + GL
Sbjct: 514 VENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE----------CGVLPNKVLCTGL 563
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
+ Y KK + I + S Y ++ LG+ + Y
Sbjct: 564 INE---YCKKGKVIEACS----AYRSMVDQ-GILGDA-------------------KTYT 596
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
++ L K ++++AE++ E D +++ G+S+ G ++KA ++ E+V++
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE 656
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNR 438
G TP ++++ G+ +EKA E + E ++V K P +I+D +
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDE-MSV----KGLHPNAVTYCTIIDGYCKSG 711
Query: 439 DVEEVEAFVSSLKIK--VQKRNMYHALTEAHIR 469
D+ E +K+K V +Y L + R
Sbjct: 712 DLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 77/394 (19%), Positives = 163/394 (41%), Gaps = 18/394 (4%)
Query: 95 MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGL 152
M QG+ + V ++ + K ++ AE F + + + YG L+N + + G
Sbjct: 583 MVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGN 642
Query: 153 VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
+ ++ S+ +M E G + + YN ++ + +G+ EK ++L +M G+ P+ +Y
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 213 CINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDI 272
I+ Y +L+ + EM+ + + D Y+T+ + E+AI +
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVP-DSFVYTTLVDGCCRLNDVERAITIFGTNKKG 761
Query: 273 VSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKI------KCKKQLNRDYITMLGSLVK 326
+ S +N LI+ G + +K L ++ + K + Y M+ L K
Sbjct: 762 CASSTAP--FNALINWVFKFGKTE--LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCK 817
Query: 327 IGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNS 386
G LE A+++ + + + +L GY + G + V E + G P
Sbjct: 818 EGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIM 877
Query: 387 WSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAF 446
+S+I + + KA + + A + + + S ++L ++E E
Sbjct: 878 YSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKV 937
Query: 447 VSSLKIKVQ----KRNMYHALTEAHIRSGQEVDG 476
+ ++ +++Q + + E+ I S Q V+
Sbjct: 938 MENM-VRLQYIPDSATVIELINESCISSNQRVEA 970
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/346 (18%), Positives = 144/346 (41%), Gaps = 7/346 (2%)
Query: 30 AVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHAL 89
+ P + + GD D + ++ + + G + + + +I+ RF A+
Sbjct: 414 VISPYTYGTVVKGMCSSGDLDGAYN-IVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAM 472
Query: 90 QVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSL--NDEDKVDKLYGALLNCY 147
+V + M QG+A + + + + K + ++ A ++ + N YGA ++ Y
Sbjct: 473 RVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGY 532
Query: 148 VREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDN 207
+ + +++M+E G + + G++ Y G+ + M + G+ D
Sbjct: 533 IEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDA 592
Query: 208 FSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA-IIYL 266
+Y + +N ++ E + +EM + I+ D +Y + N + G +KA I+
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKG-IAPDVFSYGVLINGFSKLGNMQKASSIFD 651
Query: 267 KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVK 326
+ E+ + + + YN L+ + G ++ + +K Y T++ K
Sbjct: 652 EMVEE--GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709
Query: 327 IGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
G+L EA ++ +E +L D V ++ G + +E+A +
Sbjct: 710 SGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755
>gi|225439604|ref|XP_002265961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
mitochondrial-like [Vitis vinifera]
Length = 505
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 131/294 (44%), Gaps = 17/294 (5%)
Query: 130 LNDEDKVD-KLYGALLNCYV-REGLV-DESLSLMQKMKEMGSFGSALNYNGIMCLYTNTG 186
LND VD K+ +L+ ++GL DE L M++M+++G + ++ N ++ G
Sbjct: 211 LNDGYAVDAKMCSIILSSLCEQKGLSGDEVLRFMEEMRKLGFYPGRVDCNNVIRFLVKEG 270
Query: 187 QHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTY 246
V MK +G+ PD SY + +N A + +++ EM + D Y
Sbjct: 271 MVMDALGVFDQMKTDGIKPDTVSYTMILNGVTADGDYEKADDLFDEMLVLGVVP-DIHAY 329
Query: 247 STVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLI---SHYASLGNKDEMMKFWG 303
+ N E+ + L ++ K D + YN L+ S LG E+ +
Sbjct: 330 NVYINSLCKQNNIEEGVRMLASMRELGCKP-DYVTYNMLLEGMSKVRDLGGMRELAREME 388
Query: 304 LQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEW---ELSCYCYDFRVPNIILLGYS 360
L+ ++ + Y ML LV GE++E+ +LEE SC+C F + I+
Sbjct: 389 LEGVQWNWE---TYRIMLDGLVGKGEIDESCSLLEEMLDKYFSCWCSTF---DEIICELC 442
Query: 361 QKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVH 414
Q+G++ KA ++ ++V+K P +W + G + + E + + + +H
Sbjct: 443 QRGLVCKALQLVNKMVRKTIAPGARAWEALLLGSVEFSFAETSLTELVNPIQIH 496
>gi|356527376|ref|XP_003532287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Glycine max]
Length = 515
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 88/176 (50%), Gaps = 9/176 (5%)
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLI---GKVRGLESAETYFNSLNDEDKV--DK 138
R++ AL+V E + Q + D V + LI GK + E A F ++ DE V +
Sbjct: 136 RWESALKVFELLHEQ--IWYKPDTGVYIKLIVMLGKCKQPEKAHELFQAMVDEGCVLDCE 193
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEM-GSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
Y ALL+ Y R GL+D++ SL+++MK G Y+ ++ +KI +L D
Sbjct: 194 SYTALLSAYSRSGLLDKAFSLLEEMKNTPGCQPDVQTYSILLKSCLQVFAFDKIQSLLSD 253
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMD-WGTYSTVANY 252
M G+ P+ +Y I++YG + S ME++L EM + + D W ST+ +
Sbjct: 254 MTNRGIKPNTVTYNTLIDAYGKARKFSEMESILVEMLADRYCQPDVWTMNSTLRAF 309
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 58/135 (42%), Gaps = 2/135 (1%)
Query: 85 FKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYG--A 142
+K V E+M ++++ + +D GK L+ E F + E +
Sbjct: 350 YKKMSAVMEYMQKYHYSWTIVTFNIVIDAFGKAGDLKQMEYLFRLMRSERIKPSCVTLCS 409
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
L+ Y R G ++ +++ ++ + +N ++ Y G ++ VL MK+NG
Sbjct: 410 LVRAYARAGKPEKISGVLRFVENSDVLLDTVFFNCLVDAYARLGCLAEMKGVLEMMKQNG 469
Query: 203 VPPDNFSYRICINSY 217
PD +YR I +Y
Sbjct: 470 CKPDIVTYRTMIKTY 484
>gi|116789832|gb|ABK25404.1| unknown [Picea sitchensis]
Length = 278
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 2/144 (1%)
Query: 95 MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED-KVD-KLYGALLNCYVREGL 152
M G+ S+ + + + GK R L++A FNSL VD K Y +++CY + G
Sbjct: 1 MKAAGIVPSLQTYNTMISVYGKARELQNAVQIFNSLQKSGLSVDEKTYSNMISCYGKAGF 60
Query: 153 VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
++ L +M++ G + YN ++ Y +G H + +V DM++ G PD+++Y
Sbjct: 61 FQDAAKLFSRMQQEGIKPGKVTYNTMLDAYARSGLHTRAEEVFNDMQDEGYSPDSYTYLS 120
Query: 213 CINSYGARSELSSMENVLQEMESQ 236
I +Y E++L+ M Q
Sbjct: 121 LICAYTNCQRFQEAEDLLKRMHRQ 144
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 94/228 (41%), Gaps = 5/228 (2%)
Query: 83 KRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED-KVDKL-Y 140
+ ++A+Q+ + GL+ ++ + GK + A F+ + E K K+ Y
Sbjct: 24 RELQNAVQIFNSLQKSGLSVDEKTYSNMISCYGKAGFFQDAAKLFSRMQQEGIKPGKVTY 83
Query: 141 GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKE 200
+L+ Y R GL + + M++ G + Y ++C YTN + ++ D+L M
Sbjct: 84 NTMLDAYARSGLHTRAEEVFNDMQDEGYSPDSYTYLSLICAYTNCQRFQEAEDLLKRMHR 143
Query: 201 NGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKE 260
G+ P + + ++G + + E+ ++ + D + T+ Y G
Sbjct: 144 QGLAPGLVHFNHLVFAFGKAGLVEDATRLYMEI-GKAGLKSDLACHRTMLKIYRDNGRTH 202
Query: 261 KAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIK 308
+ I+ +K ++ + D Y I Y S G E + L K K
Sbjct: 203 EGILLFEKLQNYI--EPDGNIYRMAIDLYESAGKIVEARYIFQLMKSK 248
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 144/333 (43%), Gaps = 44/333 (13%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+Y L+ +++ +++ ++++MKE G YN ++ + + ++ L++M
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM 513
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
ENG+ P+ F+Y I+ Y SE +S + ++EM + N + GL
Sbjct: 514 VENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE----------CGVLPNKVLCTGL 563
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
+ Y KK + I + S Y ++ LG+ + Y
Sbjct: 564 INE---YCKKGKVIEACS----AYRSMVDQ-GILGDA-------------------KTYT 596
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
++ L K ++++AE++ E D +++ G+S+ G ++KA ++ E+V++
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE 656
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNR 438
G TP ++++ G+ +EKA E + E ++V K P +I+D +
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDE-MSV----KGLHPNAVTYCTIIDGYCKSG 711
Query: 439 DVEEVEAFVSSLKIK--VQKRNMYHALTEAHIR 469
D+ E +K+K V +Y L + R
Sbjct: 712 DLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 77/394 (19%), Positives = 163/394 (41%), Gaps = 18/394 (4%)
Query: 95 MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGL 152
M QG+ + V ++ + K ++ AE F + + + YG L+N + + G
Sbjct: 583 MVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGN 642
Query: 153 VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
+ ++ S+ +M E G + + YN ++ + +G+ EK ++L +M G+ P+ +Y
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 213 CINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDI 272
I+ Y +L+ + EM+ + + D Y+T+ + E+AI +
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVP-DSFVYTTLVDGCCRLNDVERAITIFGTNKKG 761
Query: 273 VSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKI------KCKKQLNRDYITMLGSLVK 326
+ S +N LI+ G + +K L ++ + K + Y M+ L K
Sbjct: 762 CASSTAP--FNALINWVFKFGKTE--LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCK 817
Query: 327 IGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNS 386
G LE A+++ + + + +L GY + G + V E + G P
Sbjct: 818 EGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIM 877
Query: 387 WSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAF 446
+S+I + + KA + + A + + + S ++L ++E E
Sbjct: 878 YSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKV 937
Query: 447 VSSLKIKVQ----KRNMYHALTEAHIRSGQEVDG 476
+ ++ +++Q + + E+ I S Q V+
Sbjct: 938 MENM-VRLQYIPDSATVIELINESCISSNQRVEA 970
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/346 (18%), Positives = 144/346 (41%), Gaps = 7/346 (2%)
Query: 30 AVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHAL 89
+ P + + GD D + ++ + + G + + + +I+ RF A+
Sbjct: 414 VISPYTYGTVVKGMCSSGDLDGAYN-IVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAM 472
Query: 90 QVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSL--NDEDKVDKLYGALLNCY 147
+V + M QG+A + + + + K + ++ A ++ + N YGA ++ Y
Sbjct: 473 RVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGY 532
Query: 148 VREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDN 207
+ + +++M+E G + + G++ Y G+ + M + G+ D
Sbjct: 533 IEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDA 592
Query: 208 FSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA-IIYL 266
+Y + +N ++ E + +EM + I+ D +Y + N + G +KA I+
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKG-IAPDVFSYGVLINGFSKLGNMQKASSIFD 651
Query: 267 KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVK 326
+ E+ + + + YN L+ + G ++ + +K Y T++ K
Sbjct: 652 EMVEE--GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709
Query: 327 IGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
G+L EA ++ +E +L D V ++ G + +E+A +
Sbjct: 710 SGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755
>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 732
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 115/257 (44%), Gaps = 6/257 (2%)
Query: 155 ESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICI 214
++L ++ +M+E G + NY+ + N Q E+ ++L M G PPD +Y I
Sbjct: 169 KALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTYSSAI 228
Query: 215 NSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVS 274
+ S +L+ M+ Q + + YS + G E A+ LK+ V
Sbjct: 229 AACAKVSRWKEAVGLLRSMKGQG-VKPNVIVYSAAISACRKGGQWETAVDLLKEMP-AVG 286
Query: 275 KSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR--DYITMLGSLVKIGELEE 332
+ D + Y+ +I A G + + L ++ K + Y ++G+ K G+ EE
Sbjct: 287 LAPDVITYSTVIDACAKRGQWEPAFRL--LMEMPTKGVVANIITYSIVIGACAKWGQWEE 344
Query: 333 AEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAA 392
A +L E + + D + + ++KG E+A +L+E+ +G TP S+ I+ +
Sbjct: 345 AVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVIS 404
Query: 393 GYADKNNMEKAFECMKE 409
A + +A + ++E
Sbjct: 405 ACAKRGRWREAIDLLQE 421
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 135/325 (41%), Gaps = 10/325 (3%)
Query: 63 EGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLES 122
+G K + + I R +++ A+ + + M GLA V ++ +D K E
Sbjct: 250 QGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQWEP 309
Query: 123 AETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMC 180
A + + V + Y ++ + G +E+++L+++M+E G + Y+ +
Sbjct: 310 AFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTIS 369
Query: 181 LYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHIS 240
GQ E+ +L +M GV P+ SY I I++ R ++LQEM++ +
Sbjct: 370 ACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHG-VP 428
Query: 241 MDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMK 300
D YS + A E+A+ L++ + + + YN I A G ++
Sbjct: 429 PDVINYSAAIDACAQASRWEQALWLLREMP-ATGLTPNVISYNSAIDACAKTGRSKIAVE 487
Query: 301 FWGLQKIKCKKQLNRDYIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL 357
L+++ L D IT ++ S + EEA + E + D N +
Sbjct: 488 L--LREMP-AHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAIN 544
Query: 358 GYSQKGMIEKADAVLKEIVKKGKTP 382
+Q G E+A VL E+ G P
Sbjct: 545 ACAQGGWWEEALDVLGEMPTMGLVP 569
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 93/222 (41%), Gaps = 11/222 (4%)
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGA- 142
R K A+++ M GLA V ++ + R E A F + + +
Sbjct: 481 RSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCN 540
Query: 143 -LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
+N + G +E+L ++ +M MG A++Y + + ++I D+L +M
Sbjct: 541 TAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWKEIIDLLREMSTV 600
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
G+ PD SYR +++ +L++M + +S D TY++ N G ++
Sbjct: 601 GLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVG-LSPDVVTYNSAINACAKGGRWKE 659
Query: 262 AIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWG 303
A + L++ + D +N I + GN D+ WG
Sbjct: 660 ATVLLRQMPTF-GLAPDVNSFNAAID---ACGNGDQ----WG 693
>gi|168028441|ref|XP_001766736.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681945|gb|EDQ68367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 560
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 137/351 (39%), Gaps = 47/351 (13%)
Query: 79 LRSRKRFKHALQVSEWMSGQ-GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE--DK 135
L+ +K AL+ +W Q G V + + ++G+ R E+ + E +
Sbjct: 41 LKHQKESGLALKFFDWAKEQEGYKHDVCTYTTMIGIMGRARNFEACSRLLQEMRREGCEP 100
Query: 136 VDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVL 195
Y L++ Y R + E++ + +M+E G + Y ++ L++ G H+ D+
Sbjct: 101 CVVTYNRLIHAYGRANFLGEAMRIFYQMQEEGCSPDRVTYCTLVDLHSKAGFHDNAMDMY 160
Query: 196 LDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYII 255
M++ G PD F+Y + I+ G ++S + +EM ++ G ++ Y II
Sbjct: 161 QKMQQAGFQPDTFTYSVIIHCLGKAGKVSEALKLFEEM-------VERGFAPSLVTYNII 213
Query: 256 AGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR 315
L+ K+ GN MK + +
Sbjct: 214 IDLQAKS------------------------------GNYVMAMKLYNDMQDAGFHPDRV 243
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
Y M+ L +IG L+EAE M E E + + D + +++ + + E+A +++
Sbjct: 244 TYSIMMEVLGQIGHLQEAELMFNEMEQAGWVPDAPIYGVMVDMWGKARNAERALEWYQKM 303
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSL 426
+ G TP + + Y + AF V E K W P+L
Sbjct: 304 LDSGLTPNVQISNSLLGSYLRMQQFDLAF-------GVIETMKAWGLVPTL 347
>gi|302766812|ref|XP_002966826.1| hypothetical protein SELMODRAFT_11024 [Selaginella moellendorffii]
gi|300164817|gb|EFJ31425.1| hypothetical protein SELMODRAFT_11024 [Selaginella moellendorffii]
Length = 484
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/385 (21%), Positives = 153/385 (39%), Gaps = 78/385 (20%)
Query: 49 PD-VSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHD- 106
PD V V++ W EGQ E RV++++R + + + G G+A
Sbjct: 85 PDSVCFNTVINGWCNEGQM---EEAMRVVQEMRQKNCRPTTSTYNTLIKGYGVAGQAEQA 141
Query: 107 HAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEM 166
+ L L+ K R S+E + + + LLN + REG ++E+ ++ +K
Sbjct: 142 QQLVLHLLNKTRNSPSSEDGLEPVARPNL--RTMNTLLNAWCREGRLEEAWRVVAMIKSA 199
Query: 167 GSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSY--------- 217
G A+ YN + Y G+ ++ D++ DMK + P+ +Y I I+ Y
Sbjct: 200 GMQPDAVTYNTLAKAYAAAGRVAELEDLIADMKNARLKPNLRTYAILISCYCQNGMPERG 259
Query: 218 ----------GARSELSSMENVL----QEMESQSHISM------------DWGTYSTVAN 251
G ++ + +L QE + Q + M D TYST+ N
Sbjct: 260 LQLLSRLKFEGLHPDVVAFNTLLKGYSQENDQQLKLEMVLDLMAANGVRPDVTTYSTIMN 319
Query: 252 YYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKK 311
++ AG+ +KA L + +Q+ + K
Sbjct: 320 WWSSAGMADKAQTILLE-----------------------------------MQQDRVKP 344
Query: 312 QLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAV 371
+ R + + V+ G EAE +L++ L + V I+ G+ G ++ A V
Sbjct: 345 DV-RAFAILAKGYVRSGRTHEAESLLQDMSLHGVAPNVVVYTTIISGWCSMGRMDDALRV 403
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYAD 396
L+ ++++G+ P N+ + G+ +
Sbjct: 404 LELMLERGEAPNLNTVQTLVWGFCE 428
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 133/300 (44%), Gaps = 23/300 (7%)
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
+E+G+ PD+ + IN + ++ V+QEM Q + TY+T+ Y +AG
Sbjct: 79 EEDGLAPDSVCFNTVINGWCNEGQMEEAMRVVQEMR-QKNCRPTTSTYNTLIKGYGVAGQ 137
Query: 259 KEKA---IIYLKKCEDIVSKSKDAL---------GYNHLISHYASLGNKDEMMKFWGLQK 306
E+A +++L S+D L N L++ + G +E + + K
Sbjct: 138 AEQAQQLVLHLLNKTRNSPSSEDGLEPVARPNLRTMNTLLNAWCREGRLEEAWRVVAMIK 197
Query: 307 IKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIE 366
+ Y T+ + G + E E ++ + + + + R I++ Y Q GM E
Sbjct: 198 SAGMQPDAVTYNTLAKAYAAAGRVAELEDLIADMKNARLKPNLRTYAILISCYCQNGMPE 257
Query: 367 KADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSL 426
+ +L + +G P +++ + GY+ +N+ + E + + +A + RP +
Sbjct: 258 RGLQLLSRLKFEGLHPDVVAFNTLLKGYSQENDQQLKLEMVLDLMAANGV----RPDVTT 313
Query: 427 VSSILDWLGDNRDVEEVEAFVSSL---KIKVQKRNMYHALTEAHIRSGQ--EVDGLLESM 481
S+I++W ++ + + + ++K R + L + ++RSG+ E + LL+ M
Sbjct: 314 YSTIMNWWSSAGMADKAQTILLEMQQDRVKPDVR-AFAILAKGYVRSGRTHEAESLLQDM 372
>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Brachypodium distachyon]
Length = 801
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 117/266 (43%), Gaps = 6/266 (2%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L++ + G+ ++L + +M E G Y ++ N G+ E +L MK
Sbjct: 217 YIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMK 276
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
ENG PPD +Y + ++ + + E+ ++ YS + + AG
Sbjct: 277 ENGCPPDEVTYTVFLSGLCKAGRVDEAFHRF-ELLQDGGFTLGLIGYSCLIDGLFQAGRF 335
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI- 318
++ + Y + S S D Y LI +A G + F L ++K K + +
Sbjct: 336 DEGLSYYTEMLG-KSISPDITLYTILIRRFAEAGRTKD--AFLLLDEMKDKGFVPDTFCY 392
Query: 319 -TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
T+L +L +G ++ A+ ++ E + D NI++ G +KG+I+KA V E+ +
Sbjct: 393 NTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGE 452
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKA 403
G PT +++ + G +E+A
Sbjct: 453 HGCHPTVMTYNALIDGLYRAGMLEEA 478
>gi|224133034|ref|XP_002327945.1| predicted protein [Populus trichocarpa]
gi|222837354|gb|EEE75733.1| predicted protein [Populus trichocarpa]
Length = 1450
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 125/280 (44%), Gaps = 17/280 (6%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP----D 193
K+Y A++ Y R G ++ L M+E G +++N ++ G E P +
Sbjct: 257 KVYNAMMGVYARSGKFNKVQELFDLMRERGCEPDLVSFNTLINARLKAG--EMTPNLAIE 314
Query: 194 VLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYY 253
+L +++ +G+ PD +Y I++ S L NV +M + H D TY+ + + Y
Sbjct: 315 LLTEVRRSGLRPDIITYNTLISACSRASNLEEAVNVFDDMVAH-HCEPDLWTYNAMISVY 373
Query: 254 IIAGLKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWG-LQKIKCK 310
GL KA D+ S+ DA+ YN + +A GN +++ + KI
Sbjct: 374 GRCGLSGKAEQLFN---DLESRGFFPDAVSYNSFLYAFAREGNVEKVKDICEEMVKIGFG 430
Query: 311 KQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADA 370
K Y TM+ K G+ + A ++ + + S D +++ + IE+A
Sbjct: 431 KD-EMTYNTMIHMYGKQGQNDLALQLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEAAG 489
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNN---MEKAFECM 407
++ E++ G PT ++S + GYA E+ F+CM
Sbjct: 490 MMSEMLNTGVKPTLRTYSALICGYAKAGKPVEAEETFDCM 529
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 142/347 (40%), Gaps = 54/347 (15%)
Query: 3 SKLFSTIFN--NKRNFTKTNLEIFTRA----------YRAVKPV-ARNNLYSRISPLGD- 48
+++ STI K N +E+FTRA Y A+ V AR+ ++++ L D
Sbjct: 222 ARMLSTILAVLGKANQEPLAVEVFTRAEPSVENTVKVYNAMMGVYARSGKFNKVQELFDL 281
Query: 49 -------PD-VSLTPVLDQWVLEGQKISELELQRVIRQLRSRKR---------------- 84
PD VS +++ + G+ L ++ + RS R
Sbjct: 282 MRERGCEPDLVSFNTLINARLKAGEMTPNLAIELLTEVRRSGLRPDIITYNTLISACSRA 341
Query: 85 --FKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE----DKVDK 138
+ A+ V + M + + + + G+ AE FN L D V
Sbjct: 342 SNLEEAVNVFDDMVAHHCEPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVS- 400
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
Y + L + REG V++ + ++M ++G + YN ++ +Y GQ++ + DM
Sbjct: 401 -YNSFLYAFAREGNVEKVKDICEEMVKIGFGKDEMTYNTMIHMYGKQGQNDLALQLYRDM 459
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
K +G PD +Y + I+S G +++ ++ EM + + + TYS + Y AG
Sbjct: 460 KSSGRNPDVITYTVLIDSLGKTNKIEEAAGMMSEMLN-TGVKPTLRTYSALICGYAKAGK 518
Query: 259 KEKAIIYLKKCEDIVSKS---KDALGYNHLISHYASLGNKDEMMKFW 302
+A ++ D + +S D L Y+ ++ + M F+
Sbjct: 519 PVEA----EETFDCMLRSGTRPDQLAYSVMLDIHLRFNEPKRAMTFY 561
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 71/139 (51%), Gaps = 2/139 (1%)
Query: 133 EDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
E K+D Y +L+ + ++ LV+++ L ++++ G Y+ +M +Y N+G H K
Sbjct: 1022 EPKLDT-YKSLVASFGKQQLVEQAEELFEELQSTGCKLDRSFYHIMMKIYRNSGSHSKAQ 1080
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
+ MK+ GV P + + + SYG+ + E VL ++ ++ ++ YS+V +
Sbjct: 1081 RLFSMMKDEGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLK-ETDANLSTLPYSSVIDA 1139
Query: 253 YIIAGLKEKAIIYLKKCED 271
Y+ G I LK+ ++
Sbjct: 1140 YVRNGDYNAGIQKLKQVKE 1158
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 173/389 (44%), Gaps = 25/389 (6%)
Query: 64 GQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESA 123
G K + + VI R +F+ A ++ + M + L + + + + K R +E A
Sbjct: 247 GVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEA 306
Query: 124 ETYFNSLNDEDKVDK--LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCL 181
L + V Y AL++ +G +D++ + +M G S YN ++
Sbjct: 307 SGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHA 366
Query: 182 YTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISM 241
+ E+ D++ +M+E GV PD +Y I IN Y ++ EM + +I
Sbjct: 367 LFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEM-VEKNIRP 425
Query: 242 DWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS------KDALGYNHLISHYASLGNK 295
TY+++ + + G + + + + E+ KS D + +N LI + GN
Sbjct: 426 TVETYTSLIDVF---GKRNR----MSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNI 478
Query: 296 DEMMKFWGLQKIKCKKQLNRD--YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPN 353
D F L+++ K + + + T++ + ++EEA+K+L+E + D N
Sbjct: 479 DR--AFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYN 536
Query: 354 IILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAV 413
++ GYS++G ++ A V E++ G PT +++ + GY+ + A E ++E
Sbjct: 537 TLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREM--- 593
Query: 414 HEENKFWRPKPSLVSSILDWLGDNRDVEE 442
++K P S +++ + N D+ E
Sbjct: 594 --QSKGITPDDSTYLYVIEAMKTNDDLVE 620
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 83/413 (20%), Positives = 161/413 (38%), Gaps = 71/413 (17%)
Query: 52 SLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQL 111
+LTP L L + + ++ ++ L R H L ++ + + +
Sbjct: 60 NLTPSLLSSTLPTLHQNPILVETLLSHLH---RHPHCLDLNTRCITLCILYRLPSPKPSF 116
Query: 112 DLIGKVRGLESAETYFNSLNDED-----KVDKLYGALLNCYVREGLVDESLSLMQKMKE- 165
++ + + FN L+ K ++ LL+ Y + DE+L + MKE
Sbjct: 117 HILQPILHTTTPTVIFNELSLARNRLNVKTTLVFDLLLSAYCQFRKPDEALECLNLMKEN 176
Query: 166 ----------------------------------MGSFGSALNYNGIMCLYTNTGQHEKI 191
M S + +N ++ + G+ +K
Sbjct: 177 EIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKA 236
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
D + M+ GV P+ +Y IN Y R + + + + M+ ++ + D TY N
Sbjct: 237 KDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKN-LKPDCYTY----N 291
Query: 252 YYIIAGLKEKAIIYLKKCEDIVSK------SKDALGYNHLISHYASLGN-------KDEM 298
+I KE+ I ++ ++ K +A+ YN LI + G+ +DEM
Sbjct: 292 SFISRLCKERRI---EEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEM 348
Query: 299 MKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLG 358
M + + Y ++ +L +EEAE M++E D NI + G
Sbjct: 349 MNRGIVASV-------FTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQING 401
Query: 359 YSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
Y + G +KA ++ E+V+K PT +++ + + +N M +A E K+++
Sbjct: 402 YCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSI 454
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 127/275 (46%), Gaps = 6/275 (2%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ L++ +EG+V E+ + + M E G+ +A YN +M Y Q ++ VL M
Sbjct: 309 FNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMI 368
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G P+ SY I IN Y ++ + +L EM S+ +++ D TYST+ G
Sbjct: 369 GKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEM-SEKNLTPDTVTYSTLMQGLCQVGRP 427
Query: 260 EKAI-IYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWG-LQKIKCKKQLNRDY 317
+A+ ++ + C D + Y+ L+ + G+ DE +K + + + K +
Sbjct: 428 REALNLFKEMCSS--GLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYT 485
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
I + G + G+LE A+++ + D N+++ G ++G+ ++A +++
Sbjct: 486 ILIRGMFIA-GKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMED 544
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
G P S+++I G+ + A + + E +
Sbjct: 545 DGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVG 579
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 141/317 (44%), Gaps = 20/317 (6%)
Query: 103 SVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYG--ALLNCYVREGLVDESLSLM 160
SV + L I K + SA + N ++ +Y L+NC R VD ++S+M
Sbjct: 95 SVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVM 154
Query: 161 QKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGAR 220
KM ++G A+ +N ++ N G+ ++ + +M +G P+ SY IN
Sbjct: 155 GKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKN 214
Query: 221 SELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDAL 280
V ++ME Q+ + TY+T+ + L +A+ +L + D D +
Sbjct: 215 GNTIMAVRVFRKME-QNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVD-RGIPPDVV 272
Query: 281 GYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT---MLGSLVKIGELEEA---- 333
YN ++ + SLG +E + + K + + D +T ++ L K G + EA
Sbjct: 273 TYNTILHGFCSLGQLNEATRLF---KEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVS 329
Query: 334 EKMLEEW-ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAA 392
E M E+ E + Y Y N ++ GY +++A VL ++ KG P +S++I+
Sbjct: 330 ETMTEKGAEPNAYTY-----NALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILIN 384
Query: 393 GYADKNNMEKAFECMKE 409
GY M +A + E
Sbjct: 385 GYCKSKRMNEAKRLLSE 401
>gi|147843358|emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]
Length = 714
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 128/280 (45%), Gaps = 10/280 (3%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGS-FGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
Y L+N G + E++ L ++M AL YN ++ + + + ++ ++ M
Sbjct: 282 YSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCHGXKVDRALKIMEFM 341
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
K+NG P+ F+Y +N + L + V EM+S + D Y+T+ N++ AG
Sbjct: 342 KKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLG-LKPDTVGYTTLINFFCRAGR 400
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDE---MMKFWGLQKIKCKKQLNR 315
++A+ LK + ++ D + +N ++ G +E M++ + + K
Sbjct: 401 VDEAMELLKDMXENKCRA-DTVTFNVILGGLCREGRFEEAXGMLERLPYEGVYLNKA--- 456
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
Y +L SL + GEL++A +++ F N +L+ + G + A L +
Sbjct: 457 SYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGDAVMALLGL 516
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHE 415
++ G P PNSW+++ + + AFE + + L + E
Sbjct: 517 LELGFKPEPNSWALLVELICRERKLLPAFELLDD-LVIQE 555
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 96/215 (44%), Gaps = 8/215 (3%)
Query: 193 DVLLDMKENGVP-PDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
+V+ +MK++ V P+ +Y IN L + +EM S+ I D TY+ + N
Sbjct: 264 EVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALIN 323
Query: 252 YYIIAGLKEKAIIYLKKCEDIVSK---SKDALGYNHLISHYASLGNKDEMMKFWGLQKIK 308
+ ++A+ K + + K + + Y+ L++ + G +E + + K
Sbjct: 324 GFCHGXKVDRAL----KIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSL 379
Query: 309 CKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKA 368
K Y T++ + G ++EA ++L++ + D N+IL G ++G E+A
Sbjct: 380 GLKPDTVGYTTLINFFCRAGRVDEAMELLKDMXENKCRADTVTFNVILGGLCREGRFEEA 439
Query: 369 DAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
+L+ + +G S+ I+ + ++KA
Sbjct: 440 XGMLERLPYEGVYLNKASYRIVLNSLCREGELQKA 474
>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
[Vitis vinifera]
Length = 644
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 136/308 (44%), Gaps = 46/308 (14%)
Query: 136 VDKLYGALLNCYVREGLVDESLSLMQKM-------------------------------- 163
++ +YG L+NCYV+E + +L L+ KM
Sbjct: 150 LETVYGMLVNCYVKENMTQVALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFL 209
Query: 164 KEMGSFGSALNYNGIMCL---YTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGAR 220
KEM S G LN + I Y + G + +L++MK G+ PD +Y I I+S
Sbjct: 210 KEMKSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKM 269
Query: 221 SELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDAL 280
S L ++L +M +Q + +D + S+V + Y G E+A+ L ++ + S +
Sbjct: 270 SLLKEATSILFKM-TQMGVFLDSVSVSSVVDGYCKVGKSEEAMDVL----EVFNLSPNIF 324
Query: 281 GYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD---YITMLGSLVKIGELEEAEKML 337
+N IS + GN M+K + + C+ L D Y TM+ K+ ++ A K L
Sbjct: 325 VFNSFISKLCTDGN---MLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYL 381
Query: 338 EEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADK 397
+ +++ + G +E A+ + + ++ +G P S++ + GY K
Sbjct: 382 GKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKK 441
Query: 398 NNMEKAFE 405
+++KAFE
Sbjct: 442 GHLQKAFE 449
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 98/234 (41%), Gaps = 12/234 (5%)
Query: 175 YNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEME 234
+N + G K V DM E G+ PD FSY + Y ++S+ L +M
Sbjct: 326 FNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKML 385
Query: 235 SQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKK--CEDIVSKSKDALGYNHLISHYASL 292
+ I TY+ + + G E A ++ E +V D + YN L++ Y
Sbjct: 386 KRG-IRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVP---DVVSYNTLMNGY--- 438
Query: 293 GNKDEMMKFWGLQKIKCKKQLNRDYIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDF 349
G K + K + L + ++ D +T ++ L+K G + EA+ +L+E + D
Sbjct: 439 GKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDV 498
Query: 350 RVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
I+ G+S KG E+A + + + P + S + GY M +A
Sbjct: 499 VTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEA 552
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 64/158 (40%), Gaps = 37/158 (23%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L++ ++ GLV+E+ ++ ++ G + + I+ ++N G E+ + M
Sbjct: 466 YNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMS 525
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E+ + PD + +N Y R+ + NVL H +D AGLK
Sbjct: 526 EHHLEPDVVTCSALLNGY-CRTRCMAEANVL------FHKMLD-------------AGLK 565
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDE 297
I+ YN LI + SLGN D+
Sbjct: 566 ADVIL-----------------YNSLIHGFCSLGNIDD 586
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/433 (19%), Positives = 172/433 (39%), Gaps = 66/433 (15%)
Query: 22 EIFTRAYRAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRS 81
+F +R PV +L ++ L S + +G ++ RV R
Sbjct: 95 HMFDELFRQATPVPGRSLNGFLTALARATSS-----SACITDGPALALALFNRVCR---- 145
Query: 82 RKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNS-LNDEDKVDKLY 140
E + + +VH +++ +D + R + F L K+ ++
Sbjct: 146 -----------EQAGPRVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQIT 194
Query: 141 GA-LLNCYVREGLVDESLS-LMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+ LL C +E+++ L+ +M E+G + +Y+ I+ + ++ D+ M
Sbjct: 195 ASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMM 254
Query: 199 KENG--VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
+ G P+ +Y I+ + E ++ EM Q + D TY+ + + A
Sbjct: 255 AKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQG-VKPDVVTYNLIIDALCKA 313
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
+KA + L++ D + YN +I YA+LG E K + +K+K + +
Sbjct: 314 RAMDKAELVLRQ-MTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMF--RKMKSRGLIPNI 370
Query: 317 YI--TMLGSLVKIGELEEAEKMLEEW-------ELSCYCY-------------------- 347
I + L SL K G +EA ++ + ++ YC
Sbjct: 371 VICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNS 430
Query: 348 --------DFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNN 399
D RV NI++ Y+++GM++ A + E+ ++G +P ++S + + ++
Sbjct: 431 MKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGR 490
Query: 400 MEKAFECMKEALA 412
+ A E + +A
Sbjct: 491 LTDAMEKFNQMVA 503
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 81/399 (20%), Positives = 157/399 (39%), Gaps = 26/399 (6%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSL--NDEDKVDKLYGALLN 145
A + M+ QG+ V + + +D + K R ++ AE + N Y +++
Sbjct: 284 ACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIH 343
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
Y G + E+ + +KMK G + + N + G+ ++ ++ M G P
Sbjct: 344 GYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKP 403
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
D SY ++ Y + + M + M+S I+ D ++ + + Y G+ + A++
Sbjct: 404 DIVSYCTLLHGYASEGWFADMIGLFNSMKSNG-IAADCRVFNILIHAYAKRGMVDDAMLI 462
Query: 266 LKKCEDIVSKSKDALGYNHLISHYASLGN-KDEMMKF-----WGLQKIKCKKQLNRDYIT 319
+ + S D + Y+ +IS ++ +G D M KF G+Q
Sbjct: 463 FTEMQQ-QGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFC 521
Query: 320 MLGSLVKIGEL--EEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
M G LVK EL E K + ++ + N ++ + G + A + +
Sbjct: 522 MHGGLVKAKELVSEMINKGIPRPDIVFF-------NSVINSLCKDGRVMDAHDIFDLVTD 574
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDN 437
G+ P +++ + GY M+KAF+ + V E S++LD N
Sbjct: 575 IGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVT-----YSTLLDGYFKN 629
Query: 438 RDVEEVEAFVSSLKIKVQKRN--MYHALTEAHIRSGQEV 474
+ + ++ K K N Y + R+G+ V
Sbjct: 630 GRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTV 668
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/345 (20%), Positives = 145/345 (42%), Gaps = 13/345 (3%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFS-VHDHAVQLDLI 114
VL Q G + + +I + R K A ++ M +GL + V ++ L
Sbjct: 322 VLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLC 381
Query: 115 GKVRGLESAETYFNSLNDEDKVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
R E+AE + + K D + Y LL+ Y EG + + L MK G
Sbjct: 382 KHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCR 441
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
+N ++ Y G + + +M++ GV PD +Y I+++ L+ +M
Sbjct: 442 VFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQM 501
Query: 234 ESQSHISMDWGTYSTVANYYIIAG--LKEKAIIYLKKCEDIVSKS---KDALGYNHLISH 288
++ I + Y ++ + + G +K K ++ ++++K D + +N +I+
Sbjct: 502 VARG-IQPNTAVYHSIIQGFCMHGGLVKAKELV-----SEMINKGIPRPDIVFFNSVINS 555
Query: 289 YASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYD 348
G + + L ++ + +++ +G++++A K+L+ E+ D
Sbjct: 556 LCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETD 615
Query: 349 FRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAG 393
+ +L GY + G I + +E+ +KG P ++ I+ AG
Sbjct: 616 IVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAG 660
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 90/409 (22%), Positives = 167/409 (40%), Gaps = 23/409 (5%)
Query: 49 PDVSLTPVLDQWVLE-GQKISELELQRVIRQLRSRKRFKHALQVS-EWMSGQGLAFSVHD 106
PD+ L VL +L G KI ++ +++ L R + A+ V MS G +V
Sbjct: 173 PDLGL--VLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFS 230
Query: 107 HAVQLDLIGKVRGLESAETYFNSLNDEDKVDK----LYGALLNCYVREGLVDESLSLMQK 162
+++ L + + A F + E Y +++ + +EG ++ SL +
Sbjct: 231 YSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHE 290
Query: 163 MKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSE 222
M G + YN I+ +K VL M NG PD +Y I+ Y
Sbjct: 291 MTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGR 350
Query: 223 LSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS--KDAL 280
L + ++M+S+ I S +A+ KE A I+ + + +K D +
Sbjct: 351 LKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIF----DSMTAKGHKPDIV 406
Query: 281 GYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEW 340
Y L+ YAS G +M+ + K R + ++ + K G +++A + E
Sbjct: 407 SYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEM 466
Query: 341 ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNM 400
+ D + ++ +S+ G + A ++V +G P + I G+ +
Sbjct: 467 QQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGL 526
Query: 401 EKAFECMKEALAVHEENKFWRPKPSLV--SSILDWLG-DNRDVEEVEAF 446
KA E + E + NK P+P +V +S+++ L D R ++ + F
Sbjct: 527 VKAKELVSEMI-----NK-GIPRPDIVFFNSVINSLCKDGRVMDAHDIF 569
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 100/242 (41%), Gaps = 14/242 (5%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ +L++ Y G +D++ ++ M+ +G + Y+ ++ Y G+ + +M+
Sbjct: 584 FTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQ 643
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG-- 257
GV P+ +Y I + + EM ++ GT TV+ Y II G
Sbjct: 644 RKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEM-------IESGTTVTVSIYGIILGGL 696
Query: 258 ----LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQL 313
++AII +K + K + N +I+ + K+E + +
Sbjct: 697 CRNNCADEAIILFQKLGTMNVKFSITI-LNTMINAMYKVQRKEEAKELFATISASGLLPN 755
Query: 314 NRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
Y M+ +L+K G +E+A M E S R+ N I+ +KG I KA L
Sbjct: 756 ESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLS 815
Query: 374 EI 375
++
Sbjct: 816 KV 817
>gi|297792331|ref|XP_002864050.1| EMB1006 [Arabidopsis lyrata subsp. lyrata]
gi|297309885|gb|EFH40309.1| EMB1006 [Arabidopsis lyrata subsp. lyrata]
Length = 723
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 136/283 (48%), Gaps = 15/283 (5%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
++G L+ + EGL +E+L + +M++ G + + YN +M Y + E++ + ++
Sbjct: 346 VFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFAEI 405
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYY----I 254
K G+ P +Y I +++Y R + +E +L+EME + + +++ + + Y
Sbjct: 406 KAKGLKPTAATYNILMDAYARRMQPDIVETLLREMEDLG-LEPNVKSFTCLISAYGRTKK 464
Query: 255 IAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN 314
++ + A + +KK V + Y LI Y+ G ++ + ++ K
Sbjct: 465 MSDMAADAFLRMKK----VGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMWMEGIKPSV 520
Query: 315 RDYITMLGSLVKIGELEEAEKMLEEWELSCY--CYDFRVP-NIILLGYSQKGMIEKADAV 371
Y ++L + + G + EK++E W+L R+ N +L G++++G+ +A V
Sbjct: 521 ETYTSLLDAFRRSG---DTEKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDV 577
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVH 414
+ E K G P+ +++++ YA K + +KE A++
Sbjct: 578 VSEFGKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALN 620
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 97/235 (41%), Gaps = 22/235 (9%)
Query: 5 LFSTIFNNKRNFTKTNLEIFTRAY-RAVKPVARNNLYSRISPLG-DPDVSLTPVLDQWVL 62
LF+ I T I AY R ++P L + LG +P+V L
Sbjct: 401 LFAEIKAKGLKPTAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSFTCLISAYG 460
Query: 63 EGQKISELELQRVIRQLR--------SRKRFKHALQVSEW----------MSGQGLAFSV 104
+K+S++ +R + S HA VS W M +G+ SV
Sbjct: 461 RTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMWMEGIKPSV 520
Query: 105 HDHAVQLDLIGKVRGLES-AETYFNSLNDEDKVDKL-YGALLNCYVREGLVDESLSLMQK 162
+ LD + E E + L ++ K ++ Y LL+ + ++GL E+ ++ +
Sbjct: 521 ETYTSLLDAFRRSGDTEKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSE 580
Query: 163 MKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSY 217
+MG S + YN +M Y GQ K+P +L +M + PD+ +Y I ++
Sbjct: 581 FGKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAF 635
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 138/346 (39%), Gaps = 27/346 (7%)
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
L RE + D L L+ + + F YN + + + +++ +V M +
Sbjct: 244 LFTLLGRERMADYILLLLSNLPDKEEFKDVRLYNAAISGLSASQRYDDAWEVYEAMNKIN 303
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWG--TYSTVANYYIIAGLKE 260
V PDN + I I + R S + V + E S + W + + + GLKE
Sbjct: 304 VFPDNVTCAIMITT--MRKAGRSAKEVWEIFEKMSDKGVKWSQDVFGGLVKSFCDEGLKE 361
Query: 261 KAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITM 320
+A++ + E +S + + YN L+ Y + +E+ + K K K Y +
Sbjct: 362 EALVIQTEMEKKGIRS-NTIVYNTLMDAYNKSNHIEEVEGLFAEIKAKGLKPTAATYNIL 420
Query: 321 LGSLVKIGELEEAEKMLEEWE---LSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
+ + + + + E +L E E L F I G ++K ADA L+ + K
Sbjct: 421 MDAYARRMQPDIVETLLREMEDLGLEPNVKSFTC-LISAYGRTKKMSDMAADAFLR-MKK 478
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFW----RPKPSLVSSILDW 433
G P+ +S++ + Y+ EKA+ +E W +P +S+LD
Sbjct: 479 VGLKPSSHSYTALIHAYSVSGWHEKAYASFEE---------MWMEGIKPSVETYTSLLDA 529
Query: 434 L---GDNRDVEEVEAFVSSLKIKVQKRNMYHALTEAHIRSGQEVDG 476
GD + E+ + KIK R Y+ L + + G ++
Sbjct: 530 FRRSGDTEKLMEIWKLMLREKIK-GTRITYNTLLDGFAKQGLYIEA 574
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 122/269 (45%), Gaps = 5/269 (1%)
Query: 147 YVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPD 206
++R GL ++ S ++KM+E G +A +YNG++ +G ++ +V M G+ P
Sbjct: 170 FIRGGL-RQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPS 228
Query: 207 NFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYL 266
++ + + G R + ++ +L+EMES + + TY+ G ++A +
Sbjct: 229 LKTFSALMVASGKRRNIKTVMGLLEEMESMG-LRPNIYTYTICIRVLGRDGKIDEAYRIM 287
Query: 267 KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVK 326
K+ +D D + Y LI + D+ M + K K Y+T+L
Sbjct: 288 KRMDD-DGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSD 346
Query: 327 IGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNS 386
G L++ EK+ E E Y D I++ + G I +A +L + K+G P ++
Sbjct: 347 CGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHT 406
Query: 387 WSIIAAGYADKNNMEKAFECMK--EALAV 413
++ + +G N ++ A + E+L V
Sbjct: 407 YNTLISGLLRANRLDDALDLFSNMESLGV 435
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/363 (20%), Positives = 152/363 (41%), Gaps = 61/363 (16%)
Query: 76 IRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE-- 133
IR L + A ++ + M G V + V +D + R L+ A F +
Sbjct: 271 IRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSH 330
Query: 134 --------------------DKVDKL---------------YGALLNCYVREGLVDESLS 158
DKV+K+ + L+N + G ++E+
Sbjct: 331 KPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFD 390
Query: 159 LMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYG 218
L+ M++ G + YN ++ + + D+ +M+ GV P ++Y + I+ +G
Sbjct: 391 LLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHG 450
Query: 219 ARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL----KEKAIIYLKKCEDIVS 274
++M+++ + + A+ Y +A + + KA+ K +
Sbjct: 451 KSGHPGKALETFEKMKAR---GIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGL-- 505
Query: 275 KSKDALGYNHLISHYASLGNKDEMMKFWG-LQKIKCKKQLNRDYI---TMLGSLVKIGEL 330
+ D++ YN ++ Y+ +G DE +K + K++C+ D I +++ +L K G +
Sbjct: 506 -APDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEP----DVIVINSLIDTLYKAGRV 560
Query: 331 EEAEKM---LEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSW 387
EEA +M +EE L+ + NI+L G ++G I+KA + + + G +P ++
Sbjct: 561 EEAWQMFCRMEEMNLAPTVVTY---NILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITF 617
Query: 388 SII 390
+ +
Sbjct: 618 NTL 620
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 99/478 (20%), Positives = 183/478 (38%), Gaps = 96/478 (20%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE----DKVDKLYGAL 143
AL+ E M +G+A ++ L + ++ L A+ FN L D V Y +
Sbjct: 458 ALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVT--YNMM 515
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
+ CY + G VDE++ L+ +M ++ + N ++ G+ E+ + M+E +
Sbjct: 516 MKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNL 575
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAI 263
P +Y I + G ++ + + M S + T++T+ + + A+
Sbjct: 576 APTVVTYNILLAGLGKEGQIQKAVQLFESMNGHG-CSPNTITFNTLLDCLCKNDEVDLAL 634
Query: 264 IYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMK--FWGLQKIKCKKQLNRDYI--- 318
K + + D L +N +I + K +K W ++ KK L D++
Sbjct: 635 KMFYKMTTMNCRP-DVLTFNTIIHGFI----KQNQIKNAIWLFHQM--KKLLRPDHVTLC 687
Query: 319 TMLGSLVKIGELEEAEKMLEE-------------WE---------------------LSC 344
T+L ++K G++E+A ++ E+ WE L C
Sbjct: 688 TLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVC 747
Query: 345 --YCYD--FRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNM 400
C D +P I +L +K + + + +K + G PT ++++ G+ + +N+
Sbjct: 748 RAICKDDSVLIPIIKVLCKHKKTSVAR-NVFVKFTKELGVKPTLKVYNLLIDGFLEVHNV 806
Query: 401 EKA---FECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEV-----EAFVSSLKI 452
E A FE MK A P +S++D G + + E+ E K
Sbjct: 807 EVAWNLFEEMKSAGCA--------PDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKP 858
Query: 453 KVQKRNM-----------------YHALTEAHIRS-----GQEVDGLLESMKADDIDE 488
NM Y+ L G +DGLL+S + DD E
Sbjct: 859 NTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHE 916
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 56/294 (19%), Positives = 127/294 (43%), Gaps = 15/294 (5%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
K+Y L++ ++ V+ + +L ++MK G YN ++ + +G+ ++ D+ +
Sbjct: 791 KVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDE 850
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
M G P+ +Y + I++ + L ++ + S S T+ + + + +G
Sbjct: 851 MLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVS-GDFSPTPCTFGPLIDGLLKSG 909
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD- 316
+ A + A+ YN L++ Y LG+ D +F+ K K+ + D
Sbjct: 910 RLDDAHEMFDGMVHYGCRPNSAI-YNILVNGYGKLGHVDTACEFF---KRMVKEGIRPDL 965
Query: 317 --YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
Y ++ L G +++A E+ + + D N+++ G + E+A ++ E
Sbjct: 966 KSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHE 1025
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVS 428
+ +G P +++ + +E EA ++EE +F KP++ +
Sbjct: 1026 MQNRGIVPDLYTYNSLILNLGIVGMIE-------EAGKIYEELQFIGLKPNVFT 1072
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 96/242 (39%), Gaps = 6/242 (2%)
Query: 58 DQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKV 117
D+ + G K + + VI L R A+ + + + + +D + K
Sbjct: 849 DEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKS 908
Query: 118 RGLESAETYFNSLNDED--KVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNY 175
L+ A F+ + +Y L+N Y + G VD + ++M + G +Y
Sbjct: 909 GRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSY 968
Query: 176 NGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMES 235
++ + G+ + +K+ G+ PD +Y + IN G ++ EM++
Sbjct: 969 TILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQN 1028
Query: 236 QSHISMDWGTY-STVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGN 294
+ I D TY S + N I+ ++E IY + + + YN LI Y GN
Sbjct: 1029 RG-IVPDLYTYNSLILNLGIVGMIEEAGKIYEEL--QFIGLKPNVFTYNALIRGYTLSGN 1085
Query: 295 KD 296
+
Sbjct: 1086 SE 1087
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 68/368 (18%), Positives = 148/368 (40%), Gaps = 14/368 (3%)
Query: 72 LQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLN 131
+ +I L R + A Q+ M LA +V + + L +GK ++ A F S+N
Sbjct: 547 INSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMN 606
Query: 132 DEDKVDK--LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHE 189
+ LL+C + VD +L + KM M L +N I+ + Q +
Sbjct: 607 GHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIK 666
Query: 190 KIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTV 249
+ MK+ + PD+ + + ++ + ++ Q ++D + V
Sbjct: 667 NAIWLFHQMKKL-LRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDV 725
Query: 250 ANYYIIAGLKEKAIIYLKK--CEDIVSKSKDALG-YNHLISHYASLGNKDEMMKFWGLQK 306
+ EKAI++ ++ C I + L H + ++ +KF ++
Sbjct: 726 MGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFT--KE 783
Query: 307 IKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIE 366
+ K L + Y ++ +++ +E A + EE + + D N ++ + + G I
Sbjct: 784 LGVKPTL-KVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKIN 842
Query: 367 KADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSL 426
+ + E++ +G P +++++ + N ++KA + L + + + P P
Sbjct: 843 ELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMD-----LYYNLVSGDFSPTPCT 897
Query: 427 VSSILDWL 434
++D L
Sbjct: 898 FGPLIDGL 905
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/329 (20%), Positives = 146/329 (44%), Gaps = 8/329 (2%)
Query: 85 FKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGA 142
F A+Q + L H D + K+ A ++ + D + +
Sbjct: 171 FSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNV 230
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
L++ +E ++E+ L ++ + G + +++N ++ Y +G ++ + M EN
Sbjct: 231 LMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENR 290
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
V PD F+Y + IN +L + EM + + D T++T+ N + + G +A
Sbjct: 291 VFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDV-TFTTLINGHCVTG---RA 346
Query: 263 IIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITM 320
+ ++ + ++ K D + YN LI+ +G+ E K + K Y +
Sbjct: 347 DLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTML 406
Query: 321 LGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGK 380
+ K G+LE A ++ +E D ++ G+ ++G + +A+ L+E+++ G
Sbjct: 407 IDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGI 466
Query: 381 TPTPNSWSIIAAGYADKNNMEKAFECMKE 409
P +++++ G+ K +++ F+ +KE
Sbjct: 467 KPDDATYTMVIHGFCKKGDVKTGFKLLKE 495
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 112/253 (44%), Gaps = 6/253 (2%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+N +EG +D++ L +M + G + + + ++ + TG+ + ++ M
Sbjct: 298 YSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQML 357
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
GV PD +Y IN +L + ++ EM +Q + D TY+ + + G
Sbjct: 358 RKGVKPDVITYNTLINGLCKVGDLREAKKLVIEM-TQRGLKPDKFTYTMLIDGCCKEGDL 416
Query: 260 EKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
E A+ K ++V + D + + LIS + G E + K + Y
Sbjct: 417 ESALEIRK---EMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATY 473
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
++ K G+++ K+L+E + + N++L G ++G ++ A+ +L ++
Sbjct: 474 TMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLN 533
Query: 378 KGKTPTPNSWSII 390
G P +++I+
Sbjct: 534 LGVVPDDITYNIL 546
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 105/239 (43%), Gaps = 8/239 (3%)
Query: 104 VHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV--DKLYGALLNCYVREGLVDESLSLMQ 161
V ++V ++ + K L+ A F + D V D + L+N + G D + + Q
Sbjct: 295 VFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQ 354
Query: 162 KMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARS 221
+M G + YN ++ G + ++++M + G+ PD F+Y + I+
Sbjct: 355 QMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEG 414
Query: 222 ELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALG 281
+L S + +EM + I +D ++ + + + G +A L++ + K DA
Sbjct: 415 DLESALEIRKEMVKEG-IELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDA-T 472
Query: 282 YNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR--DYITMLGSLVKIGELEEAEKMLE 338
Y +I + G D F L++++C + Y +L L K G+++ A +L+
Sbjct: 473 YTMVIHGFCKKG--DVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLD 529
>gi|147779268|emb|CAN70089.1| hypothetical protein VITISV_038171 [Vitis vinifera]
Length = 838
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 154/362 (42%), Gaps = 21/362 (5%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLES----AETYFNSL 130
V QLR K++ + + W+ + S H + +L+ G +S AE+ + L
Sbjct: 68 VAVQLRLNKQWDAIVLICGWILYRS---SFHPDVICYNLLIDAYGQKSLYKKAESTYLEL 124
Query: 131 NDEDKV--DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQH 188
+ V + Y LL Y GL++++ ++ +M++ G SA+ YN + G
Sbjct: 125 LEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDT 184
Query: 189 EKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYST 248
+K ++ MK + P +Y + IN YG S+ V EM SQ + T++
Sbjct: 185 QKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQK-CKPNICTFTA 243
Query: 249 VANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGL-QKI 307
+ N + GL EKA ++ ++ D YN L+ Y+ G + + L Q +
Sbjct: 244 LVNAFAREGLCEKAEEIFEQLQE-AGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHM 302
Query: 308 KCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEK 367
C+ Y M+ + + G E+A+ + E + + ++L YS+ G + K
Sbjct: 303 GCEPD-RASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAK 361
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLV 427
+ ++ ++ K G P + + Y EK M+E L E+ P P+ +
Sbjct: 362 CEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEK----MEEVLTAMEKG----PYPADI 413
Query: 428 SS 429
S+
Sbjct: 414 ST 415
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/329 (19%), Positives = 135/329 (41%), Gaps = 41/329 (12%)
Query: 86 KHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGAL 143
+ A+++ E M S + + ++L GK A F+ + + + + AL
Sbjct: 185 QKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTAL 244
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
+N + REGL +++ + ++++E G YN +M Y+ G ++ M+ G
Sbjct: 245 VNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGC 304
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAI 263
PD SY I +++YG R+ L + E+ + I+ ++ + + Y AG
Sbjct: 305 EPDRASYNIMVDAYG-RAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAG------ 357
Query: 264 IYLKKCEDIVSK-SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLG 322
+ KCE+IV++ K + + + + M+ +G
Sbjct: 358 -KVAKCEEIVNQMHKSGIKPDTFV--------LNSMLNLYG------------------- 389
Query: 323 SLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTP 382
++G+ E+ E++L E Y D NI++ Y + G + + + + + + P
Sbjct: 390 ---RLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIP 446
Query: 383 TPNSWSIIAAGYADKNNMEKAFECMKEAL 411
+W+ Y+ + + E +E +
Sbjct: 447 DVVTWTSRIGAYSRRKQYNRCLEVFEEMI 475
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 77/181 (42%), Gaps = 9/181 (4%)
Query: 81 SRKRFKH-ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLN--DEDKVD 137
SR F + A ++ M G + + +D G+ E A+ F +
Sbjct: 284 SRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTM 343
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
K + LL+ Y R G V + ++ +M + G N ++ LY GQ EK+ +VL
Sbjct: 344 KSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTA 403
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHIS--MDW----GTYSTVAN 251
M++ P D +Y I IN YG + ME + + + +++ I + W G YS
Sbjct: 404 MEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQ 463
Query: 252 Y 252
Y
Sbjct: 464 Y 464
>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g12100, mitochondrial; Flags: Precursor
gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 816
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 185/422 (43%), Gaps = 31/422 (7%)
Query: 81 SRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV--DK 138
S ++ + AL V E G+ + + ++ L+ + K +E AE + V +
Sbjct: 331 SNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEV 390
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+Y +++ Y R+G + + ++ M++ G L YN ++ + G+ E + M
Sbjct: 391 IYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKM 450
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
K GV P +Y I I YG + E ++L+EME + + +Y T+ N
Sbjct: 451 KLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMP-NVVSYGTLINCLCKGSK 509
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR-DY 317
+A I + ED K + YN LI S G ++ +F + +K +LN Y
Sbjct: 510 LLEAQIVKRDMEDRGVSPKVRI-YNMLIDGCCSKGKIEDAFRFSK-EMLKKGIELNLVTY 567
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
T++ L G+L EAE +L E D N ++ GY G +++ A+ +E+ +
Sbjct: 568 NTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKR 627
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEE---NKFWRPKPSLVSSILDWL 434
G PT ++ ++ + C KE + + E +P + + +L
Sbjct: 628 SGIKPTLKTYHLLIS------------LCTKEGIELTERLFGEMSLKPDLLVYNGVLHCY 675
Query: 435 GDNRDVEEVEAFVSSLKIKVQK-----RNMYHALTEAHIRSGQ--EVDGLLESMKADDID 487
+ D+E +AF + K ++K + Y++L ++ G+ EV L++ M A +++
Sbjct: 676 AVHGDME--KAF-NLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREME 732
Query: 488 ED 489
+
Sbjct: 733 PE 734
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 130/297 (43%), Gaps = 18/297 (6%)
Query: 103 SVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLM 160
SV + V +D + K + + AE F+ + + L Y L++ Y + G ++S +
Sbjct: 213 SVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVR 272
Query: 161 QKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGAR 220
++MK S + +N ++ G E +VL +MK+ G PD F++ I + Y +
Sbjct: 273 ERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSN 332
Query: 221 SELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS---- 276
+ + V E S + M+ T S + N G EKA E+I+ +
Sbjct: 333 EKAEAALGV-YETAVDSGVKMNAYTCSILLNALCKEGKIEKA-------EEILGREMAKG 384
Query: 277 --KDALGYNHLISHYASLGN-KDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEA 333
+ + YN +I Y G+ MK ++K K + Y ++ ++GE+E A
Sbjct: 385 LVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPD-HLAYNCLIRRFCELGEMENA 443
Query: 334 EKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSII 390
EK + + +L NI++ GY +K +K +LKE+ G P S+ +
Sbjct: 444 EKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTL 500
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 147/371 (39%), Gaps = 45/371 (12%)
Query: 79 LRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLE-SAETYFNSLNDEDKVD 137
L K A + + +G+ S + LD + K + + + N L + +
Sbjct: 119 LNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPS 178
Query: 138 K-LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGI---MCLYTNTGQHEKIPD 193
K +YG + V+ V + L L +MK + S YN + +C E++ D
Sbjct: 179 KFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFD 238
Query: 194 VLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYY 253
+L + + P +Y I+ Y V + M++ HI T++T+
Sbjct: 239 EMLARR---LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKAD-HIEPSLITFNTLLKGL 294
Query: 254 IIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFW------GLQ-- 305
AG+ E A LK+ +D+ DA ++ L Y+S + + + G++
Sbjct: 295 FKAGMVEDAENVLKEMKDL-GFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMN 353
Query: 306 ---------------KI-KCKKQLNRD-----------YITMLGSLVKIGELEEAEKMLE 338
KI K ++ L R+ Y TM+ + G+L A +E
Sbjct: 354 AYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIE 413
Query: 339 EWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKN 398
E D N ++ + + G +E A+ + ++ KG +P+ +++I+ GY K
Sbjct: 414 AMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKY 473
Query: 399 NMEKAFECMKE 409
+K F+ +KE
Sbjct: 474 EFDKCFDILKE 484
>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 162/373 (43%), Gaps = 25/373 (6%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYG--ALLN 145
+ Q+ + GL+ +V + +D K +E A +F+ + + V Y L+N
Sbjct: 181 SFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLIN 240
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
++GL + L +KMK G F + YN +M Y G+ + D+ +M+E GV
Sbjct: 241 GLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEA 300
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
+ +Y I + E ++ +M+ ++ +S + TY+T+ + G +KA
Sbjct: 301 NVVTYNTLIGGMCREERVWEAEKLVDQMK-KAAVSPNLITYNTLIGGFCDVGNLDKASSL 359
Query: 266 LKKCEDIVSKSKDALGYNHLISHYASLGNKDEM------MKFWGLQ--KIKCKKQLNRDY 317
L + + S + YN LI Y+ GN + M+ G+ K+ C
Sbjct: 360 LDQLKS-NGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCT------- 411
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
++ + V++ E+E+A ++ E D V +++ G KG ++++ + + + +
Sbjct: 412 -VLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGE 470
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDN 437
P+ ++ + GY ++N +A ++E E K P + SSI+ L +
Sbjct: 471 MHVEPSDVIYNTMIHGYCKEDNSYRALRLLREM-----EAKGLVPNVASYSSIIGVLCKD 525
Query: 438 RDVEEVEAFVSSL 450
EE E + +
Sbjct: 526 GKWEEAEVLLDKM 538
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/286 (19%), Positives = 125/286 (43%), Gaps = 13/286 (4%)
Query: 120 LESAETYFNSLNDEDKVDK--LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNG 177
L+ A +FN + D+ V + ++ +LL VR +++ ++KE F + G
Sbjct: 109 LDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFEKAWLFFNELKERVKFD--VYSFG 166
Query: 178 IM----CLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
IM C N + ++ +L DM G+ P+ Y I+ ++ +M
Sbjct: 167 IMIKGCCENGNLDKSFQLLGLLQDM---GLSPNVVIYTTLIDGCCKNGDIERARLFFDKM 223
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLG 293
++ + T++ + N GLK+ +K + I + YN L++ Y G
Sbjct: 224 GEMGLVANQY-TFTVLINGLFKKGLKKDGFDLFEKMK-INGLFPNLYTYNCLMNEYCGEG 281
Query: 294 NKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPN 353
+ + + + Y T++G + + + EAEK++++ + + + N
Sbjct: 282 KICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYN 341
Query: 354 IILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNN 399
++ G+ G ++KA ++L ++ G +P+ +++I+ GY+ N
Sbjct: 342 TLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGN 387
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 105/257 (40%), Gaps = 12/257 (4%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+ RE V E+ L+ +MK+ + + YN ++ + + G +K +L +K
Sbjct: 305 YNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLK 364
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
NG+ P +Y I I Y + ++ +EME + IS T + + + Y+
Sbjct: 365 SNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRG-ISPSKVTCTVLIDAYVRLQEM 423
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
EKA E D Y LI GN E K + + + Y T
Sbjct: 424 EKAFQIYSSMEKF-GLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNT 482
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNI-----ILLGYSQKGMIEKADAVLKE 374
M+ K A ++L E E VPN+ I+ + G E+A+ +L +
Sbjct: 483 MIHGYCKEDNSYRALRLLREMEAKGL-----VPNVASYSSIIGVLCKDGKWEEAEVLLDK 537
Query: 375 IVKKGKTPTPNSWSIIA 391
+++ P+ + ++I+
Sbjct: 538 MIELQLKPSASILNMIS 554
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 81/185 (43%), Gaps = 5/185 (2%)
Query: 30 AVKP--VARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKH 87
AV P + N L +G+ D + + +LDQ G S + +I +K
Sbjct: 332 AVSPNLITYNTLIGGFCDVGNLDKA-SSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKG 390
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDK--LYGALLN 145
++ M G+G++ S V +D +++ +E A ++S+ V +YG L++
Sbjct: 391 VADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIH 450
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
+G + ES L + M EM S + YN ++ Y + +L +M+ G+ P
Sbjct: 451 GLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVP 510
Query: 206 DNFSY 210
+ SY
Sbjct: 511 NVASY 515
>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
Length = 700
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 93/452 (20%), Positives = 179/452 (39%), Gaps = 87/452 (19%)
Query: 53 LTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLD 112
L +L + +G++I+ L + RFK +L+ M G + D A
Sbjct: 235 LQSLLQKMQTQGREITRSMLHSFVMSYGRSGRFKESLEAFNLMKEMGYEPGLIDTAYNSV 294
Query: 113 LIGKVRG--LESAETYFNSL-NDEDKVDKL-YGALLNCY--------------------- 147
L+ V+ L+ AE F + N+ + L Y +++ C+
Sbjct: 295 LVSLVKNKKLDMAENLFAQMINNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNNY 354
Query: 148 --------------VREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPD 193
+ +++++ ++QKM+E G + YN ++ + E+ +
Sbjct: 355 APDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALE 414
Query: 194 VLLDMKENGVPPDNFSYRI-----C------------------------------INSYG 218
++ M++ GVPP+ ++Y I C +N Y
Sbjct: 415 LVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYC 474
Query: 219 ARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAII--YLKKCEDIVSKS 276
S L ++L+EM Q+ + D TY+T +I GL + + L+ +++ +K
Sbjct: 475 RGSRLIEAMDILKEMH-QNDCTPDHVTYTT-----LIQGLVQGNQLPDALRMHDEMENKG 528
Query: 277 KDAL--GYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
D N L A +GN + F+ K + DY + L GE+EEA+
Sbjct: 529 YDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQ 588
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGY 394
+L E Y + N ++ G+ ++G ++ ADA+L +++ G P S++I+ +
Sbjct: 589 ALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILIKEF 648
Query: 395 ADKNNMEKAFECMKEALAVHEENKFWRPKPSL 426
++ + A + AL E PKP +
Sbjct: 649 HNQGRTQDADQLYATAL---ERGVVLNPKPVI 677
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 90/462 (19%), Positives = 171/462 (37%), Gaps = 119/462 (25%)
Query: 58 DQW-VLEGQKIS----ELELQRVIRQLRSRKRFKHALQVSEWMSGQ-GLAFSVHDHAVQL 111
DQW L+ ++ +L V++ L + ++AL+ +W Q G + + +
Sbjct: 164 DQWECLQDNFLNSMAQDLNPDAVVKVLNLQTDAQNALRFFQWADKQEGYDHNTDAYFTMI 223
Query: 112 DLIGKVRGLESAETYFNSLNDEDK--VDKLYGALLNCYVREGLVDESLSLMQKMKEMGS- 168
D++G+ + ++ + + + + + + Y R G ESL MKEMG
Sbjct: 224 DILGRAKMFTELQSLLQKMQTQGREITRSMLHSFVMSYGRSGRFKESLEAFNLMKEMGYE 283
Query: 169 ---------------------------FGSALNYNGIMC---LYTNTGQ----HEKIPD- 193
F +N NG+ C YT+ Q EK+ D
Sbjct: 284 PGLIDTAYNSVLVSLVKNKKLDMAENLFAQMIN-NGVSCNNLTYTSMIQCFFLKEKMEDA 342
Query: 194 --VLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
+L DM +N PD +Y I I++ R + VLQ+M ++ + TY+ +
Sbjct: 343 MKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMR-ENGCEPNIYTYNALIQ 401
Query: 252 YYIIAGLKEKAI--------------IY--------------LKKCEDIVSKS------K 277
E+A+ IY L + +++ +++
Sbjct: 402 GLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKP 461
Query: 278 DALGYNHLISHYASLGNKDEMMKFWG-LQKIKCKKQLNRDYITMLGSLVKIGELEEAEKM 336
+ + YN L++ Y E M + + C + Y T++ LV+ +L +A +M
Sbjct: 462 NRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPD-HVTYTTLIQGLVQGNQLPDALRM 520
Query: 337 LEEWELSCYCYDFRVPNIILLG-----------------------------------YSQ 361
+E E Y +F NI+ G S
Sbjct: 521 HDEMENKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLST 580
Query: 362 KGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
G +E+A A+L E++ KG +P +++ + G+ + ++ A
Sbjct: 581 AGEMEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDA 622
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 70/350 (20%), Positives = 153/350 (43%), Gaps = 23/350 (6%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLES----AETYFNSL 130
V++Q + + A++ +W Q + + D + KV L++ A +F
Sbjct: 147 VVQQEDTVNKICKAIEEDQWECLQDNFLNSMAQDLNPDAVVKVLNLQTDAQNALRFFQWA 206
Query: 131 NDEDKVDK---LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQ 187
+ ++ D Y +++ R + E SL+QKM+ G + + + Y +G+
Sbjct: 207 DKQEGYDHNTDAYFTMIDILGRAKMFTELQSLLQKMQTQGREITRSMLHSFVMSYGRSGR 266
Query: 188 HEKIPDVLLDMKENGVPPD--NFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGT 245
++ + MKE G P + +Y + S +L EN+ +M + +S + T
Sbjct: 267 FKESLEAFNLMKEMGYEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQMINNG-VSCNNLT 325
Query: 246 YSTVANYYIIAGLKEKAIIYLKKCEDIVSK--SKDALGYNHLISHYASLGNKDEMMKFWG 303
Y+++ + LKEK +K +D++ + D + Y +IS +L + + + +G
Sbjct: 326 YTSMIQCFF---LKEKMEDAMKLLDDMIQNNYAPDVVTYTIVIS---ALCKRKMIEQAYG 379
Query: 304 -LQKIK---CKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGY 359
LQK++ C+ + Y ++ L + EEA +++ E + I+ G
Sbjct: 380 VLQKMRENGCEPNI-YTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGL 438
Query: 360 SQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
+ +++A + E + +G P +++ + GY + + +A + +KE
Sbjct: 439 CKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKE 488
>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1016
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 152/329 (46%), Gaps = 11/329 (3%)
Query: 59 QWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVR 118
Q V+ G + + ++ L + K A + +S L + + +D KV
Sbjct: 333 QLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVG 392
Query: 119 GLESAETYFNSLNDEDKVDK---LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNY 175
+E E+ + +E ++ Y +++N Y ++G++DE++++M+KM + +A Y
Sbjct: 393 DMERVESLLQEM-EEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVY 451
Query: 176 NGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMES 235
++ Y G+ E D+ +MK +G+ +N + + +N+ + E +L+++ S
Sbjct: 452 AILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTS 511
Query: 236 QSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSK--DALGYNHLISHYASLG 293
+ + +D Y+++ + + AG KE A L E++ KS D + YN LI+ G
Sbjct: 512 RG-LLLDHVNYTSLMDGFFKAG-KESAA--LNMVEEMTEKSIPFDVVTYNVLINGLLEHG 567
Query: 294 NKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPN 353
+ + G+ ++ Y M+ + K GEL+ A ++ E + N
Sbjct: 568 KYEAKSVYSGMIEMGLAPN-QATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCN 626
Query: 354 IILLGYSQKGMIEKADAVLKEIVKKGKTP 382
+++G S+ G IEKA VL E+ G P
Sbjct: 627 TLVVGLSEAGEIEKAMNVLNEMSVMGIHP 655
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 131/304 (43%), Gaps = 46/304 (15%)
Query: 114 IGKVRGLESAETYFNSLNDEDKVDKL--------YGALLNCYVREGLVDESLSLMQKMKE 165
I + RG++ + +FN + K D L Y +++ Y ++ ++E+ +L ++M
Sbjct: 208 ISESRGVKDS-VFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARALYEEMII 266
Query: 166 MGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSS 225
G + Y+ I+ G+ + ++L +MK+ GV P++ +Y I+S L
Sbjct: 267 NGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDS------LFK 320
Query: 226 MENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHL 285
+ + QS + + T V ++ GL + SK K+A
Sbjct: 321 AGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKS------------SKPKEA------ 362
Query: 286 ISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCY 345
++M F L K+ + Y ++ K+G++E E +L+E E
Sbjct: 363 ----------EDM--FRALSKLNLIPN-SITYTALIDGYCKVGDMERVESLLQEMEEKHI 409
Query: 346 CYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
+ + I+ GY++KG++++A V+K+++ + P ++I+ GY E A +
Sbjct: 410 NPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATD 469
Query: 406 CMKE 409
E
Sbjct: 470 LYNE 473
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 132/309 (42%), Gaps = 55/309 (17%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ L++ Y + G + +L L+++M++ G ++YN ++ + G+++K +L ++
Sbjct: 150 FNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEIS 209
Query: 200 EN---------------------GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSH 238
E+ + D +Y I++Y + L + +EM
Sbjct: 210 ESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARALYEEMIINGF 269
Query: 239 ISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEM 298
+ D TYS++ N G +A L++ + + + + Y LI G+
Sbjct: 270 LP-DVVTYSSIVNGLCKDGRLSEAQELLREMKKM-GVDPNHVAYTTLIDSLFKAGSA--- 324
Query: 299 MKFWGLQKIKCKKQL-----NRDYI---TMLGSLVKIGELEEAEKM---LEEWELSCYCY 347
W + C+ QL D + T++ L K + +EAE M L + L
Sbjct: 325 ---W--EAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNL----- 374
Query: 348 DFRVPNII-----LLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEK 402
+PN I + GY + G +E+ +++L+E+ +K P ++S I GY K +++
Sbjct: 375 ---IPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDE 431
Query: 403 AFECMKEAL 411
A MK+ L
Sbjct: 432 AINVMKKML 440
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/360 (20%), Positives = 155/360 (43%), Gaps = 37/360 (10%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ++ + + GLV+++ + M + + + N ++ + G + ++ ++
Sbjct: 80 YNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVKGFCRIGLAKYGERIMDNLV 139
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G D + I+ Y E+S ++++ M + +S D +Y+T+ N + G
Sbjct: 140 SGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLS-DIVSYNTLINGFCKRGEY 198
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQ-KIKCKKQLNRD-- 316
+KA L H IS S G KD + F+ + +IK LN +
Sbjct: 199 DKAKSLL-----------------HEISE--SRGVKDSV--FFNIDDRIKKDDNLNLEAD 237
Query: 317 ---YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
Y T++ + K LEEA + EE ++ + D + I+ G + G + +A +L+
Sbjct: 238 LITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLR 297
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDW 433
E+ K G P +++ + + +AF C + + + + ++++D
Sbjct: 298 EMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVV-----RGMTLDLVMCTTLVDG 352
Query: 434 LGDNRDVEEVEAFVSSL-KIKVQKRNM-YHALTEAHIRSG--QEVDGLLESMKADDIDED 489
L + +E E +L K+ + ++ Y AL + + + G + V+ LL+ M+ I+ +
Sbjct: 353 LFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPN 412
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 66/344 (19%), Positives = 139/344 (40%), Gaps = 66/344 (19%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ++ Y ++G +D +L L +MK S++ N ++ + G+ EK +VL +M
Sbjct: 590 YNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMS 649
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQ---SHISMDWGTYSTVANYYIIA 256
G+ P+ +R+ +N+ S S N + +M Q + ++ Y+ + +
Sbjct: 650 VMGIHPNLVIHRVLLNA----SSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRL 705
Query: 257 GLKEKAIIYLKKC--EDIVSKSKDALGYNHLISHYA------------------------ 290
+ +KA LK + V+ D + YN LI Y
Sbjct: 706 RMTKKATSVLKYMIRDGFVA---DTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNI 762
Query: 291 --------------SLGNKDEMMKFWGLQKIKCKKQLNRD---YITMLGSLVKIGELEEA 333
+ +DE+ K+K + LN D Y T++ KIG +E+
Sbjct: 763 VTYNLLLGGLLGAGLMAERDEL-----FDKMK-ENGLNPDASTYDTLISGYGKIGNKKES 816
Query: 334 EKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAG 393
++ E + N+++ +++ G +++A +L E+ +G P+ +++ I+ G
Sbjct: 817 IRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILICG 876
Query: 394 YAD-------KNNMEKAFECMKEALAVHEENKFWRPKPSLVSSI 430
+ + ++K + + L +K + P S ++ I
Sbjct: 877 WCNLSKHPDLDRTLKKIYRTDAKNLITEMNDKGFVPCKSTIACI 920
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 155/348 (44%), Gaps = 37/348 (10%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM---CLYTNTGQHEKIPDVLL 196
Y +N ++ +DE+ ++++M E+G + + YN ++ C N + KI D
Sbjct: 329 YSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRD--- 385
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
DM G+ P++ + I + ++ ENVL+EM + + ++ G++S V N+ +
Sbjct: 386 DMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRG-LPINQGSFSMVINWLCLK 444
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
A+ ++++ + D L L+S G + E ++ W + L +
Sbjct: 445 FRFVTALHFIREMLLRNLRPNDGL-LTTLVSGLCKAGKQGEAVELWC-------RLLGKG 496
Query: 317 YI-------TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKAD 369
++ ++ L K G ++E K+L + +D N ++ G ++G +++
Sbjct: 497 FVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGF 556
Query: 370 AVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA----FECMKEALAVHEENKFWRPKPS 425
+ +E+VKKG P +++++ G + + +++A EC K + P
Sbjct: 557 ELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNG---------YVPNVY 607
Query: 426 LVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRN--MYHALTEAHIRSG 471
++D VEE E ++ L K + N +Y++L A+ +G
Sbjct: 608 TYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCING 655
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 127/279 (45%), Gaps = 20/279 (7%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L++ +EG V E L ++M + G +N ++ N + ++ + + K
Sbjct: 539 YNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECK 598
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+NG P+ ++Y + I+ Y +++ EN+L E+ S+ + ++ Y+++ Y I G
Sbjct: 599 KNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKK-LELNSVVYNSLIRAYCING-N 656
Query: 260 EKAIIYLKKCEDIVSKSK--DALGYNHLISHYASLGNKD-------EMMKFWGLQKIKCK 310
A L+ +D+ S+ Y+ L+ ++G D EM K L + C
Sbjct: 657 MNAAFRLR--DDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVC- 713
Query: 311 KQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADA 370
Y T++G K+G++ + +L+E + I++ G+ + G ++A
Sbjct: 714 ------YTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAK 767
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
+L E+ +KG P +++ G + +E+AF+ E
Sbjct: 768 LLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDE 806
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 72/369 (19%), Positives = 153/369 (41%), Gaps = 43/369 (11%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I L R A + E M + ++ S+ ++V ++ + K+ ++ A +++
Sbjct: 297 IIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELG 356
Query: 135 KV--DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
V + +Y L++ Y + G + E+L + M G +++ N ++ + + Q +
Sbjct: 357 FVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAE 416
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
+VL +M G+P + S+ + IN + + + ++EM ++ D G +T+ +
Sbjct: 417 NVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPND-GLLTTLVSG 475
Query: 253 YIIAG---------------------LKEKAIIY-----------LKKCEDIVSKSK--D 278
AG + A+I+ LK D++ + D
Sbjct: 476 LCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFD 535
Query: 279 ALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT---MLGSLVKIGELEEAEK 335
+ YN LIS G E + L++ KK + D T +L L +++EA +
Sbjct: 536 RITYNTLISGCCKEGKVKEGFE---LKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASR 592
Query: 336 MLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYA 395
+ E + + Y + +++ GY + +E+ + +L E+V K ++ + Y
Sbjct: 593 LWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYC 652
Query: 396 DKNNMEKAF 404
NM AF
Sbjct: 653 INGNMNAAF 661
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 98/254 (38%), Gaps = 43/254 (16%)
Query: 99 GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE--DKVDKLYGALLNCYVREGLVDES 156
G +V+ + V +D K +E E N L + + +Y +L+ Y G ++ +
Sbjct: 601 GYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAA 660
Query: 157 LSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINS 216
L MK G S Y+ +M N G + +L +M++ G+ P+ Y I
Sbjct: 661 FRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGG 720
Query: 217 YGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS 276
Y +++ + VLQEM S +I + TY+ + + + G ++A L ++ K
Sbjct: 721 YSKLGQMNKVNIVLQEMSSH-NIHPNKFTYTIMIDGFCKLGKTKEAAKLL---NEMTEKG 776
Query: 277 --KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
DA+ YN + L K G++EEA
Sbjct: 777 ILPDAVTYNAFTN-----------------------------------GLCKEGKVEEAF 801
Query: 335 KMLEEWELSCYCYD 348
K+ +E C D
Sbjct: 802 KVCDEMSSGAVCLD 815
>gi|270342070|gb|ACZ74655.1| hypothetical protein [Phaseolus vulgaris]
gi|270342076|gb|ACZ74661.1| hypothetical protein [Phaseolus vulgaris]
Length = 485
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 119/271 (43%), Gaps = 12/271 (4%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+N EG V E+ L +M G ++YN ++C Y G+ + +L +M
Sbjct: 182 YTTLMNGLCEEGKVKEAHQLFHQMVHRGIAPDIVSYNTLVCGYCRHGEMQMCRSILYEMI 241
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
N + PD+ + R+ ++ Y +L S N ++E++ V +Y ++A K
Sbjct: 242 GNRICPDSITCRVIVDGYARDGKLLSALNTVEELK-----RFRMKIPEEVYDYLVVALCK 296
Query: 260 E----KAIIYLKKC-EDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN 314
E A +L + ED + + YN L+ N++E + + K K
Sbjct: 297 EGKPFAARSFLHRISEDGYTPKMNT--YNKLVESLCEFNNEEEALILKSDMENKSMKVNA 354
Query: 315 RDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
Y ++ L ++ EAE +LEE S D + ++ GY ++ ++KA ++LK
Sbjct: 355 AAYRAVIICLCRVKRTVEAEVLLEEIIGSDMLPDVEISRALIKGYCEENKVDKAVSLLKL 414
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
K+ + S++ + + D N+ + E
Sbjct: 415 FAKEFQVYDTESYNAVVKVFCDVGNVTELME 445
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 108/251 (43%), Gaps = 21/251 (8%)
Query: 165 EMGSFG---SALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARS 221
EMG G +A +N + + + G +K+ L M+E G PD +Y +NSY +
Sbjct: 99 EMGRLGVQRNAYTFNIMTHVLSKDGDTDKVTGFLEKMEEEGFEPDLVTYNTLVNSYCKKR 158
Query: 222 ELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG-LKEKAIIYLKKCEDIVSKSKDAL 280
L + + M + + + TY+T+ N G +KE ++ + + + D +
Sbjct: 159 RLEDAFYLYKIMYVRG-VMPNLITYTTLMNGLCEEGKVKEAHQLFHQMVHRGI--APDIV 215
Query: 281 GYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT---MLGSLVKIGELEEAEKML 337
YN L+ Y G EM + ++ D IT ++ + G+L A +
Sbjct: 216 SYNTLVCGYCRHG---EMQMCRSILYEMIGNRICPDSITCRVIVDGYARDGKLLSALNTV 272
Query: 338 EEWELSCYCYDFRVP----NIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAG 393
EE + + ++P + +++ ++G A + L I + G TP N+++ +
Sbjct: 273 EELKR----FRMKIPEEVYDYLVVALCKEGKPFAARSFLHRISEDGYTPKMNTYNKLVES 328
Query: 394 YADKNNMEKAF 404
+ NN E+A
Sbjct: 329 LCEFNNEEEAL 339
>gi|224119538|ref|XP_002318099.1| predicted protein [Populus trichocarpa]
gi|222858772|gb|EEE96319.1| predicted protein [Populus trichocarpa]
Length = 426
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 120/267 (44%), Gaps = 3/267 (1%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+Y L++ Y + ++E+ L +M+ G ++ +N +M Y+ Q + I +LL+M
Sbjct: 83 IYNTLMDSYSKSNQIEEAEGLYSEMQAKGLKPTSATFNILMDAYSRRMQPDIIEKLLLEM 142
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
++ G+ P+ SY I++YG + ++S M ++ I +Y+ + + Y ++G
Sbjct: 143 QDAGLAPNAKSYTCLISAYGRQKKMSDMAADAFLRMKKAGIKPTSYSYTALIHAYSVSGW 202
Query: 259 KEKAIIYLKKCE-DIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
EKA I + + + + S + Y L+ + G+ +M W L + + +
Sbjct: 203 HEKAYITFENMQREGIKPSIET--YTTLLDAFRRAGDTKTLMDIWKLMMREKVEGTRVTF 260
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
+L K G EA ++ E++ N+++ Y++ G K +LKE+
Sbjct: 261 NILLDGFAKQGHYMEARDVINEFKKFGLHPTVMTYNMLMNAYARGGQDSKLPQLLKEMAT 320
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAF 404
P +++ + Y + +AF
Sbjct: 321 LKLEPDSITYTTMIYAYVRVRDFRRAF 347
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 135/277 (48%), Gaps = 17/277 (6%)
Query: 141 GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKE 200
GAL+ + EGL E+L + +M+ G +A+ YN +M Y+ + Q E+ + +M+
Sbjct: 50 GALIKSFCDEGLKKEALIIQTEMERRGISSNAIIYNTLMDSYSKSNQIEEAEGLYSEMQA 109
Query: 201 NGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYY----IIA 256
G+ P + ++ I +++Y R + +E +L EM+ + ++ + +Y+ + + Y ++
Sbjct: 110 KGLKPTSATFNILMDAYSRRMQPDIIEKLLLEMQD-AGLAPNAKSYTCLISAYGRQKKMS 168
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLG-NKDEMMKFWGLQKIKCKKQLNR 315
+ A + +KK + Y LI Y+ G ++ + F +Q+ K +
Sbjct: 169 DMAADAFLRMKKA----GIKPTSYSYTALIHAYSVSGWHEKAYITFENMQREGIKPSIE- 223
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCY--CYDFRVP-NIILLGYSQKGMIEKADAVL 372
Y T+L + + G + + +++ W+L RV NI+L G++++G +A V+
Sbjct: 224 TYTTLLDAFRRAG---DTKTLMDIWKLMMREKVEGTRVTFNILLDGFAKQGHYMEARDVI 280
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
E K G PT +++++ YA K + +KE
Sbjct: 281 NEFKKFGLHPTVMTYNMLMNAYARGGQDSKLPQLLKE 317
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 62/143 (43%), Gaps = 12/143 (8%)
Query: 87 HALQVSEW----------MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE--D 134
HA VS W M +G+ S+ + LD + ++ + + E +
Sbjct: 195 HAYSVSGWHEKAYITFENMQREGIKPSIETYTTLLDAFRRAGDTKTLMDIWKLMMREKVE 254
Query: 135 KVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDV 194
+ LL+ + ++G E+ ++ + K+ G + + YN +M Y GQ K+P +
Sbjct: 255 GTRVTFNILLDGFAKQGHYMEARDVINEFKKFGLHPTVMTYNMLMNAYARGGQDSKLPQL 314
Query: 195 LLDMKENGVPPDNFSYRICINSY 217
L +M + PD+ +Y I +Y
Sbjct: 315 LKEMATLKLEPDSITYTTMIYAY 337
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 60/128 (46%), Gaps = 1/128 (0%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y LL+ + R G + + + M G+ + +N ++ + G + + DV+ + K
Sbjct: 225 YTTLLDAFRRAGDTKTLMDIWKLMMREKVEGTRVTFNILLDGFAKQGHYMEARDVINEFK 284
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ G+ P +Y + +N+Y + S + +L+EM + + D TY+T+ Y+
Sbjct: 285 KFGLHPTVMTYNMLMNAYARGGQDSKLPQLLKEMATLK-LEPDSITYTTMIYAYVRVRDF 343
Query: 260 EKAIIYLK 267
+A Y K
Sbjct: 344 RRAFFYHK 351
>gi|302755512|ref|XP_002961180.1| hypothetical protein SELMODRAFT_21211 [Selaginella moellendorffii]
gi|300172119|gb|EFJ38719.1| hypothetical protein SELMODRAFT_21211 [Selaginella moellendorffii]
Length = 497
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 158/364 (43%), Gaps = 23/364 (6%)
Query: 49 PD-VSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHD- 106
PD V V++ W EGQ E RV++++R + + + G G+A
Sbjct: 85 PDSVCFNTVINGWCNEGQM---EEAMRVVQEMRQKNCRPTTSTYNTLIKGYGVAGQAEQA 141
Query: 107 HAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEM 166
+ L L+ K R S+E + + + LLN + REG ++E+ ++ +K
Sbjct: 142 QQLVLHLLNKTRNSPSSEDGLEPVARPNL--RTMNTLLNAWCREGRLEEAWRVVAMIKSA 199
Query: 167 GSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSM 226
G A+ YN + Y G+ ++ D++ DMK + P+ +Y I I+ Y
Sbjct: 200 GMQPDAVTYNTLAKAYAAAGRVAELEDLIADMKNARLKPNLRTYAILISCYCQNGMPERG 259
Query: 227 ENVLQEMESQSHISMDWGTYSTVANYYI----------IAGLKEKAIIYLKKCEDIVSKS 276
+L ++ + + D ++T+ Y+ + + L+ D+++ +
Sbjct: 260 LQLLSRLKFEG-LHPDVVAFNTLLKGYVEQQSSQQQQDFQSQENDQQLKLEMVLDLMAAN 318
Query: 277 ---KDALGYNHLISHYASLGNKDEMMK-FWGLQKIKCKKQLNRDYITMLGSLVKIGELEE 332
D Y+ +++ ++S G D+ +Q+ + K + R + + V+ G E
Sbjct: 319 GVRPDVTTYSTIMNWWSSAGVADKAQTILLEMQQDRVKPDV-RAFAILAKGYVRSGRTHE 377
Query: 333 AEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAA 392
AE +L++ L + V I+ G+ G ++ A VL+ ++++G+ P N+ +
Sbjct: 378 AESLLQDMSLHGVAPNVVVYTTIISGWCSMGRMDDALRVLELMLERGEAPNLNTVQTLVW 437
Query: 393 GYAD 396
G+ +
Sbjct: 438 GFCE 441
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 71/353 (20%), Positives = 148/353 (41%), Gaps = 45/353 (12%)
Query: 98 QGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDK---LYGALLNCYVREGLVD 154
QG SV + V + + + + A+ + +ED + + ++N + EG ++
Sbjct: 45 QGHRPSVECYTVAIAEVVAEKKMSEAQQLLKQMEEEDGLAPDSVCFNTVINGWCNEGQME 104
Query: 155 ESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM---------KENGVPP 205
E++ ++Q+M++ + YN ++ Y GQ E+ ++L + E+G+ P
Sbjct: 105 EAMRVVQEMRQKNCRPTTSTYNTLIKGYGVAGQAEQAQQLVLHLLNKTRNSPSSEDGLEP 164
Query: 206 ----DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
+ + +N++ L V+ ++S + + D TY+T+A Y AG
Sbjct: 165 VARPNLRTMNTLLNAWCREGRLEEAWRVVAMIKS-AGMQPDAVTYNTLAKAYAAAG---- 219
Query: 262 AIIYLKKCEDIVSKSKDAL------GYNHLISHYASLGNKDE------MMKFWGLQK-IK 308
+ + ED+++ K+A Y LIS Y G + +KF GL +
Sbjct: 220 ---RVAELEDLIADMKNARLKPNLRTYAILISCYCQNGMPERGLQLLSRLKFEGLHPDVV 276
Query: 309 CKKQLNRDYI--TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNI-----ILLGYSQ 361
L + Y+ E +++ E L + P++ I+ +S
Sbjct: 277 AFNTLLKGYVEQQSSQQQQDFQSQENDQQLKLEMVLDLMAANGVRPDVTTYSTIMNWWSS 336
Query: 362 KGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVH 414
G+ +KA +L E+ + P +++I+A GY +A E + + +++H
Sbjct: 337 AGVADKAQTILLEMQQDRVKPDVRAFAILAKGYVRSGRTHEA-ESLLQDMSLH 388
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 71/368 (19%), Positives = 148/368 (40%), Gaps = 78/368 (21%)
Query: 148 VREGLVDESLSLMQKMKEM-GSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPD 206
V E + E+ L+++M+E G ++ +N ++ + N GQ E+ V+ +M++ P
Sbjct: 62 VAEKKMSEAQQLLKQMEEEDGLAPDSVCFNTVINGWCNEGQMEEAMRVVQEMRQKNCRPT 121
Query: 207 NFSYRICINSYGARSELSSMENVLQEMESQSHIS------------MDWGTYSTVANYYI 254
+Y I YG + + ++ + +++ S + T +T+ N +
Sbjct: 122 TSTYNTLIKGYGVAGQAEQAQQLVLHLLNKTRNSPSSEDGLEPVARPNLRTMNTLLNAWC 181
Query: 255 IAGLKEKA--IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWG-LQKIKCKK 311
G E+A ++ + K + DA+ YN L YA+ G E+ ++ + K
Sbjct: 182 REGRLEEAWRVVAMIKSAGM---QPDAVTYNTLAKAYAAAGRVAELEDLIADMKNARLKP 238
Query: 312 QLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAV 371
L R Y + +SCYC Q GM E+ +
Sbjct: 239 NL-RTYAIL---------------------ISCYC--------------QNGMPERGLQL 262
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYAD-------------KNNMEKAFECMKEALAVHEENK 418
L + +G P +++ + GY + +N+ + E + + +A +
Sbjct: 263 LSRLKFEGLHPDVVAFNTLLKGYVEQQSSQQQQDFQSQENDQQLKLEMVLDLMAANGV-- 320
Query: 419 FWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL---KIKVQKRNMYHALTEAHIRSGQ--E 473
RP + S+I++W ++ + + + ++K R + L + ++RSG+ E
Sbjct: 321 --RPDVTTYSTIMNWWSSAGVADKAQTILLEMQQDRVKPDVR-AFAILAKGYVRSGRTHE 377
Query: 474 VDGLLESM 481
+ LL+ M
Sbjct: 378 AESLLQDM 385
>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 493
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 117/267 (43%), Gaps = 6/267 (2%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+Y +++ VD +L ++ M++MG + YN ++ ++G+ +L DM
Sbjct: 180 IYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDM 239
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
G+ PD ++ I+ +G +L + EM +S + + TY+++ N I GL
Sbjct: 240 MRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRS-VDPNIVTYNSLINGLCIHGL 298
Query: 259 KEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
++A K +VSK +A+ YN L++ Y D+ MK +
Sbjct: 299 LDEA---KKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFT 355
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y T+ + G+ AEK+L D N++L G + G IEKA L+++
Sbjct: 356 YNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQ 415
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKA 403
K +++II G N +E A
Sbjct: 416 KSETVVGIITYNIIIKGMCKANKVEDA 442
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/342 (20%), Positives = 143/342 (41%), Gaps = 10/342 (2%)
Query: 68 SELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYF 127
S ++ R++ + K+++ + + + G++ ++ + +D + L A +
Sbjct: 72 SIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALSCL 131
Query: 128 NS---LNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTN 184
L E + +G+L+N + + E++SL+ ++ +G + + YN I+
Sbjct: 132 GKMMKLGFEPSIVT-FGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 190
Query: 185 TGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWG 244
Q + DVL M++ G+ PD +Y I + +L +M I D
Sbjct: 191 NRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMG-IHPDVI 249
Query: 245 TYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDA--LGYNHLISHYASLGNKDEMMKFW 302
T+S + + + G + + + K+ ++++ +S D + YN LI+ G DE K
Sbjct: 250 TFSAMIDVF---GKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVL 306
Query: 303 GLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQK 362
K Y T++ K +++A K+L D N + GY Q
Sbjct: 307 NFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQA 366
Query: 363 GMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
G A+ VL +V G P +++++ G + +EKA
Sbjct: 367 GQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKAL 408
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 10/197 (5%)
Query: 95 MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSL--NDEDKVDKLYGALLNCYVREGL 152
M G+ V + +D+ GK L A+ ++ + D Y +L+N GL
Sbjct: 239 MMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGL 298
Query: 153 VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
+DE+ ++ M G F +A+ YN ++ Y + + + +L M +GV D F+Y
Sbjct: 299 LDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNT 358
Query: 213 CINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDI 272
Y + ++ E VL M S + D T++ + + G EKA++ K ED+
Sbjct: 359 LYQGYCQAGQFNAAEKVLARMVSCGVLP-DIYTFNMLLDGLCEHGKIEKALV---KLEDL 414
Query: 273 VSKSKDALG---YNHLI 286
KS+ +G YN +I
Sbjct: 415 -QKSETVVGIITYNIII 430
>gi|242036455|ref|XP_002465622.1| hypothetical protein SORBIDRAFT_01g042420 [Sorghum bicolor]
gi|241919476|gb|EER92620.1| hypothetical protein SORBIDRAFT_01g042420 [Sorghum bicolor]
Length = 817
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 128/289 (44%), Gaps = 44/289 (15%)
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
C V++ +D +L+L + M +G G L +N ++ N+ + ++ ++ MK+ + P
Sbjct: 448 CKVKK--LDLALALTKDMVGLGCKGKLLMFNDLILELCNSDRLDEAYEIFNQMKDLDLKP 505
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
F+Y R + S+ ++L+EM + SH +
Sbjct: 506 SEFTYNSLFYGICRRKDTSAAADLLREMRTSSHKP------------------------W 541
Query: 266 LKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLV 325
+K C ++V + L ++ I+ +L DEM+K L I Y + +
Sbjct: 542 IKNCTEMVQQ----LCFSGRITE--ALQFLDEMLKLGFLPDIV-------TYSAAMNGMC 588
Query: 326 KIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPN 385
KIGE E A + + CY D NI++ G+ + G ++A +++E++ KG P+
Sbjct: 589 KIGETENALGLFRDISSKCYLPDVVAHNILINGFRKAGKFDEAQEIMEEMLSKGLFPSVV 648
Query: 386 SWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWL 434
+++++ + ++KA C+ + + EE P +S+LD L
Sbjct: 649 TYNLMIDIWCKSGKIDKAISCVYK--MIDEEKP---PTVVTYTSLLDGL 692
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 99/256 (38%), Gaps = 43/256 (16%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+++QL R ALQ + M G + ++ ++ + K+ E+A F ++ +
Sbjct: 548 MVQQLCFSGRITEALQFLDEMLKLGFLPDIVTYSAAMNGMCKIGETENALGLFRDISSKC 607
Query: 135 KVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQ----- 187
+ + + L+N + + G DE+ +M++M G F S + YN ++ ++ +G+
Sbjct: 608 YLPDVVAHNILINGFRKAGKFDEAQEIMEEMLSKGLFPSVVTYNLMIDIWCKSGKIDKAI 667
Query: 188 --------HEKIPDV-----LLD-----------------MKENGVPPDNFSYRICINSY 217
EK P V LLD M E G P+ +Y IN
Sbjct: 668 SCVYKMIDEEKPPTVVTYTSLLDGLCNAGRPDEAIILWCKMSEKGCSPNEIAYTAFINGL 727
Query: 218 GARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSK 277
+ N +EM+++ +D + + N I G K LK V K
Sbjct: 728 CKCGRTETAVNYYEEMKTKC-FDLDIFSLLNLTNSLIAQGQASKGCELLK-----VVLQK 781
Query: 278 DALGYNHLISHYASLG 293
D + NH S G
Sbjct: 782 DVVHSNHFKMQQLSAG 797
>gi|125563762|gb|EAZ09142.1| hypothetical protein OsI_31412 [Oryza sativa Indica Group]
Length = 962
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 3/180 (1%)
Query: 109 VQLDLIGKVRGLESAETYFNSLNDEDKVDKL-YGALLNCYVREGLVDESLSLMQKMKEMG 167
V LD+ GK AE F + D + Y ++ + + G + +Q+M+E G
Sbjct: 757 VLLDIYGKAGLFNKAEKVFLMARKQGMADIISYNTIIAAHAKNGDFRSMIYFVQRMQEAG 816
Query: 168 SFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSME 227
S YN ++ Y GQ E+ VL M+ G D+++Y I IN YG + + +
Sbjct: 817 FPVSLEAYNCMLDAYGKAGQLEEFAAVLQKMERAGCEFDHYTYNIMINIYGRKGWIEGVA 876
Query: 228 NVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLIS 287
NVL E++S+ D +Y+T+ Y IAG+ E A+ +++ I + D + Y +LI+
Sbjct: 877 NVLAELKSRGG-EPDLYSYNTLIKAYGIAGMPEDAVKLMQEMR-IKGIAADRVTYTNLIA 934
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 104/231 (45%), Gaps = 9/231 (3%)
Query: 182 YTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISM 241
Y G EK+ D + ++ V D Y IN G + + + EM Q H++
Sbjct: 692 YQKCGLLEKLSDTYYWILKSQVELDEAMYNCIINCCGRAIPVDELSRIFDEMIQQGHLA- 750
Query: 242 DWGTYSTVANYYIIAGLKEKA--IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMM 299
+ T + + + Y AGL KA + + + + + D + YN +I+ +A G+ M+
Sbjct: 751 NTVTLNVLLDIYGKAGLFNKAEKVFLMARKQGMA----DIISYNTIIAAHAKNGDFRSMI 806
Query: 300 KF-WGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLG 358
F +Q+ L Y ML + K G+LEE +L++ E + +D NI++
Sbjct: 807 YFVQRMQEAGFPVSLEA-YNCMLDAYGKAGQLEEFAAVLQKMERAGCEFDHYTYNIMINI 865
Query: 359 YSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
Y +KG IE VL E+ +G P S++ + Y E A + M+E
Sbjct: 866 YGRKGWIEGVANVLAELKSRGGEPDLYSYNTLIKAYGIAGMPEDAVKLMQE 916
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 99/219 (45%), Gaps = 23/219 (10%)
Query: 198 MKENGVPPDNF-SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
MK NG N +Y + + + + + + +L EM + S ++D ++ + Y+ A
Sbjct: 217 MKANGKLKGNAEAYHLALQAIAWKEDWEAAGQLLHEMVADSGCALDAQAFNGL--IYVCA 274
Query: 257 GLKEKAIIYLKK-----CEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKK 311
K + + + K E V + +G L+ Y +GN E +F + KC
Sbjct: 275 --KRRLVDWGTKWLHMMLERDVQPNVSTVGM--LMGLYQRIGNLPEA-EFTFAKMRKCGI 329
Query: 312 QLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPN-----IILLGYSQKGMIE 366
+ Y M+ ++G ++E+++ + D VPN + L Y Q+G +E
Sbjct: 330 KCVNAYSAMVTLYTRLGHFAKSEEVI-----TLMNNDEVVPNMENWLVRLNAYCQQGKME 384
Query: 367 KADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
+A+ VLK +V +G +++ + GY ++M+KA E
Sbjct: 385 EAELVLKSLVDEGIALNVVAYNTVITGYGKVSDMQKAME 423
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 74/396 (18%), Positives = 156/396 (39%), Gaps = 54/396 (13%)
Query: 104 VHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGAL--LNCYVREGLVDESLSLMQ 161
V+ ++ + L ++ +E +N+++ V + L LN Y ++G ++E+ +++
Sbjct: 332 VNAYSAMVTLYTRLGHFAKSEEVITLMNNDEVVPNMENWLVRLNAYCQQGKMEEAELVLK 391
Query: 162 KMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARS 221
+ + G + + YN ++ Y +K +V +K G+ PD +YR I +G
Sbjct: 392 SLVDEGIALNVVAYNTVITGYGKVSDMQKAMEVFDRLKSAGLAPDETTYRSMIEGFGRAD 451
Query: 222 ELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALG 281
+ +++ + G +N+Y + L +++ D+ G
Sbjct: 452 KYKQAILYYRKLRNS-------GFKPNASNFYTMINL--------------LARHDDSEG 490
Query: 282 YNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWE 341
++ E M+ G Q L R Y GS +G + + ++L+
Sbjct: 491 ATEIL----------EDMRAAGCQCSSIVTVLVRAY----GS---VGRMHKVLQILKACF 533
Query: 342 LSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNME 401
+D +I++ G+ Q ++E+A VL+E K N + I+ +
Sbjct: 534 YKKILFDATSCSILVTGFVQNSLVEEAMRVLREKKWKDSDFEDNLYHILICSCKEAG--- 590
Query: 402 KAFECMKEALAVHEE--NKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNM 459
C +A+ ++ + P + S++D + EA LK +M
Sbjct: 591 ----CCDDAVRIYNQMPKSATHPNLRIYCSMIDVFSIMERFTDAEALYLELKASSCVLDM 646
Query: 460 --YHALTEAHIRSGQEVDG--LLESM-KADDIDEDK 490
Y + + ++G+ D +LE M K +I DK
Sbjct: 647 IAYSVIVRMYTKAGRPEDACLVLEDMEKQKEIVPDK 682
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 111/254 (43%), Gaps = 9/254 (3%)
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
L+ +V+ LV+E++ ++++ K S Y+ ++C G + + M ++
Sbjct: 547 LVTGFVQNSLVEEAMRVLREKKWKDSDFEDNLYHILICSCKEAGCCDDAVRIYNQMPKSA 606
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
P+ Y I+ + + E + E+++ S + +D YS + Y AG E A
Sbjct: 607 THPNLRIYCSMIDVFSIMERFTDAEALYLELKASSCV-LDMIAYSVIVRMYTKAGRPEDA 665
Query: 263 IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEM--MKFWGLQ-KIKCKKQLNRDYIT 319
+ L+ E D + ++ Y G +++ +W L+ +++ + + I
Sbjct: 666 CLVLEDMEKQKEIVPDKYLFLDMLRTYQKCGLLEKLSDTYYWILKSQVELDEAMYNCIIN 725
Query: 320 MLGSLVKIGELEEA-EKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
G + + EL ++M+++ L+ + N++L Y + G+ KA+ V K+
Sbjct: 726 CCGRAIPVDELSRIFDEMIQQGHLA----NTVTLNVLLDIYGKAGLFNKAEKVFLMARKQ 781
Query: 379 GKTPTPNSWSIIAA 392
G + +IIAA
Sbjct: 782 GMADIISYNTIIAA 795
>gi|115479233|ref|NP_001063210.1| Os09g0423300 [Oryza sativa Japonica Group]
gi|50725891|dbj|BAD33419.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|50726131|dbj|BAD33652.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113631443|dbj|BAF25124.1| Os09g0423300 [Oryza sativa Japonica Group]
gi|125605742|gb|EAZ44778.1| hypothetical protein OsJ_29409 [Oryza sativa Japonica Group]
Length = 962
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 3/180 (1%)
Query: 109 VQLDLIGKVRGLESAETYFNSLNDEDKVDKL-YGALLNCYVREGLVDESLSLMQKMKEMG 167
V LD+ GK AE F + D + Y ++ + + G + +Q+M+E G
Sbjct: 757 VLLDIYGKAGLFNKAEKVFLMARKQGMADIISYNTIIAAHAKNGDFRSMIYFVQRMQEAG 816
Query: 168 SFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSME 227
S YN ++ Y GQ E+ VL M+ G D+++Y I IN YG + + +
Sbjct: 817 FPVSLEAYNCMLDAYGKAGQLEEFAAVLQKMERAGCEFDHYTYNIMINIYGRKGWIEGVA 876
Query: 228 NVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLIS 287
NVL E++S+ D +Y+T+ Y IAG+ E A+ +++ I + D + Y +LI+
Sbjct: 877 NVLAELKSRGG-EPDLYSYNTLIKAYGIAGMPEDAVKLMQEMR-IKGIAADRVTYTNLIA 934
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 104/231 (45%), Gaps = 9/231 (3%)
Query: 182 YTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISM 241
Y G EK+ D + ++ V D Y IN G + + + EM Q H++
Sbjct: 692 YQKCGLLEKLSDTYYWILKSQVELDEAMYNCIINCCGRAIPVDELSRIFDEMIQQGHLA- 750
Query: 242 DWGTYSTVANYYIIAGLKEKA--IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMM 299
+ T + + + Y AGL KA + + + + + D + YN +I+ +A G+ M+
Sbjct: 751 NTVTLNVLLDIYGKAGLFNKAEKVFLMARKQGMA----DIISYNTIIAAHAKNGDFRSMI 806
Query: 300 KF-WGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLG 358
F +Q+ L Y ML + K G+LEE +L++ E + +D NI++
Sbjct: 807 YFVQRMQEAGFPVSLEA-YNCMLDAYGKAGQLEEFAAVLQKMERAGCEFDHYTYNIMINI 865
Query: 359 YSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
Y +KG IE VL E+ +G P S++ + Y E A + M+E
Sbjct: 866 YGRKGWIEGVANVLAELKSRGGEPDLYSYNTLIKAYGIAGMPEDAVKLMQE 916
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 99/219 (45%), Gaps = 23/219 (10%)
Query: 198 MKENGVPPDNF-SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
MK NG N +Y + + + + + + +L EM + S ++D ++ + Y+ A
Sbjct: 217 MKANGKLKGNAEAYHLALQAIAWKEDWEAAGQLLHEMVADSGCALDAQAFNGL--IYVCA 274
Query: 257 GLKEKAIIYLKK-----CEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKK 311
K + + + K E V + +G L+ Y +GN E +F + KC
Sbjct: 275 --KRRLVDWGTKWLHMMLERDVQPNVSTVGM--LMGLYQRIGNLPEA-EFTFAKMRKCGI 329
Query: 312 QLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPN-----IILLGYSQKGMIE 366
+ Y M+ ++G ++E+++ + D VPN + L Y Q+G +E
Sbjct: 330 KCVNAYSAMVTLYTRLGHFAKSEEVI-----TLMNNDEVVPNMENWLVRLNAYCQQGKME 384
Query: 367 KADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
+A+ VLK +V +G +++ + GY ++M+KA E
Sbjct: 385 EAELVLKSLVDEGIALNVVAYNTVITGYGKVSDMQKAME 423
Score = 41.6 bits (96), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 74/396 (18%), Positives = 156/396 (39%), Gaps = 54/396 (13%)
Query: 104 VHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGAL--LNCYVREGLVDESLSLMQ 161
V+ ++ + L ++ +E +N+++ V + L LN Y ++G ++E+ +++
Sbjct: 332 VNAYSAMVTLYTRLGHFAKSEEVITLMNNDEVVPNMENWLVRLNAYCQQGKMEEAELVLK 391
Query: 162 KMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARS 221
+ + G + + YN ++ Y +K +V +K G+ PD +YR I +G
Sbjct: 392 SLVDEGIALNVVAYNTVITGYGKVSDMQKAMEVFDRLKSAGLAPDETTYRSMIEGFGRAD 451
Query: 222 ELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALG 281
+ +++ + G +N+Y + L +++ D+ G
Sbjct: 452 KYKQAILYYRKLRNS-------GFKPNASNFYTMINL--------------LARHDDSEG 490
Query: 282 YNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWE 341
++ E M+ G Q L R Y GS +G + + ++L+
Sbjct: 491 ATEIL----------EDMRAAGCQCSSIVTVLVRAY----GS---VGRMHKVLQILKACF 533
Query: 342 LSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNME 401
+D +I++ G+ Q ++E+A VL+E K N + I+ +
Sbjct: 534 YKKILFDATSCSILVTGFVQNSLVEEAMRVLREKKWKDSDFEDNLYHILICSCKEAG--- 590
Query: 402 KAFECMKEALAVHEE--NKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNM 459
C +A+ ++ + P + S++D + EA LK +M
Sbjct: 591 ----CCDDAVRIYNQMPKSATHPNLRIYCSMIDVFSIMERFTDAEALYLELKASSCVLDM 646
Query: 460 --YHALTEAHIRSGQEVDG--LLESM-KADDIDEDK 490
Y + + ++G+ D +LE M K +I DK
Sbjct: 647 IAYSVIVRMYTKAGRPEDACLVLEDMEKQKEIVPDK 682
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 111/254 (43%), Gaps = 9/254 (3%)
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
L+ +V+ LV+E++ ++++ K S Y+ ++C G + + M ++
Sbjct: 547 LVTGFVQNSLVEEAMRVLREKKWKDSDFEDNLYHILICSCKEAGCCDDAVRIYNQMPKSA 606
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
P+ Y I+ + + E + E+++ S + +D YS + Y AG E A
Sbjct: 607 THPNLRIYCSMIDVFSIMERFTDAEALYLELKASSCV-LDMIAYSVIVRMYTKAGRPEDA 665
Query: 263 IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEM--MKFWGLQ-KIKCKKQLNRDYIT 319
+ L+ E D + ++ Y G +++ +W L+ +++ + + I
Sbjct: 666 CLVLEDMEKQKEIVPDKYLFLDMLRTYQKCGLLEKLSDTYYWILKSQVELDEAMYNCIIN 725
Query: 320 MLGSLVKIGELEEA-EKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
G + + EL ++M+++ L+ + N++L Y + G+ KA+ V K+
Sbjct: 726 CCGRAIPVDELSRIFDEMIQQGHLA----NTVTLNVLLDIYGKAGLFNKAEKVFLMARKQ 781
Query: 379 GKTPTPNSWSIIAA 392
G + +IIAA
Sbjct: 782 GMADIISYNTIIAA 795
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 156/381 (40%), Gaps = 49/381 (12%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I L R + + AL V + M +G A V + + L+ K RG A + + E
Sbjct: 173 LIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEG 232
Query: 135 KVDK--LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
Y L++ EG VD++L L++ + G S +NYN ++ + +
Sbjct: 233 CTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDAD 292
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
+++ +M PP+ ++ + I S + L +L++M G + + Y
Sbjct: 293 ELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKH-------GCTANIVTY 345
Query: 253 -YIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKK 311
II GL E+ ++ G L+S S G K +++
Sbjct: 346 NAIINGLCEQ---------------RNVDGAMGLLSKMKSYGCKPDIVT----------- 379
Query: 312 QLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGY-SQKGMIEKADA 370
Y T+L L + +AE++++ + C V L+G+ QKG++ A
Sbjct: 380 -----YNTLLKGLCSAAQWVDAEELMDNMTQN-GCLPDNVTFNTLIGFLCQKGLMVDAIE 433
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSI 430
V K++ KG TP ++S I +G A +++A E E +K + P + +
Sbjct: 434 VFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEM-----GHKGFNPD-KIYQLL 487
Query: 431 LDWLGDNRDVEEVEAFVSSLK 451
+ L D+ +EE V L+
Sbjct: 488 AECLNDDDTIEEAIQTVRKLQ 508
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/182 (20%), Positives = 78/182 (42%), Gaps = 1/182 (0%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
++D G + +I L + A++V + M +G + ++ + +
Sbjct: 399 LMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLA 458
Query: 116 KVRGLESAETYFNSLNDED-KVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALN 174
K L+ A FN + + DK+Y L C + ++E++ ++K+++ G +
Sbjct: 459 KATKLDQALELFNEMGHKGFNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVL 518
Query: 175 YNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEME 234
YN I+ G+ E D++ M +G PD+ +Y I I L+ +L ++
Sbjct: 519 YNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLC 578
Query: 235 SQ 236
S+
Sbjct: 579 SR 580
>gi|357454999|ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
gi|357455013|ref|XP_003597787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355486828|gb|AES68031.1| Beta-D-galactosidase [Medicago truncatula]
gi|355486835|gb|AES68038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 139/319 (43%), Gaps = 37/319 (11%)
Query: 149 REGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG-VPPDN 207
R +V+++LS+ ++K +A YN ++ + G HEK+ ++ +M G PD
Sbjct: 172 RVKMVNKALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCFPDT 231
Query: 208 FSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAI---- 263
+Y I+++G + S + EM+ ++ + Y+T+ Y G E+A+
Sbjct: 232 VTYSALISAFGKLNRDDSAVRLFDEMK-ENGLQPTAKIYTTLMGIYFKLGKVEEALNLVH 290
Query: 264 -IYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITM-- 320
+ +++C V Y LI LG + +G+ K K D + M
Sbjct: 291 EMRMRRCVPTV------YTYTELIR---GLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNN 341
Query: 321 -LGSLVKIGELEEAEKMLEEWE-LSCYCYDFRVPNIILLGYSQKGMIE------KADAVL 372
+ L + L+EA ++ EE L+C PN++ K + E +A + L
Sbjct: 342 LINILGRSDRLKEAVELFEEMRLLNC------TPNVVTYNTIIKSLFEDKAPPSEASSWL 395
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILD 432
+ + K G P+ ++SI+ G+ N +EKA ++E + K + P P+ S+++
Sbjct: 396 ERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEM-----DEKGFPPCPAAYCSLIN 450
Query: 433 WLGDNRDVEEVEAFVSSLK 451
LG + E LK
Sbjct: 451 SLGKAKRYEAANELFQELK 469
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 144/330 (43%), Gaps = 7/330 (2%)
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESA-ETYFNSLNDEDKVDK-LYG 141
+ + AL + M + +V+ + + +GK +E A Y N L D K D L
Sbjct: 281 KVEEALNLVHEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMN 340
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM-CLYTNTGQHEKIPDVLLDMKE 200
L+N R + E++ L ++M+ + + + YN I+ L+ + + L MK+
Sbjct: 341 NLINILGRSDRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKK 400
Query: 201 NGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKE 260
+GV P +F+Y I I+ + + + +L+EM+ + Y ++ N A E
Sbjct: 401 DGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCP-AAYCSLINSLGKAKRYE 459
Query: 261 KAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWG-LQKIKCKKQLNRDYIT 319
A ++ ++ S + Y +I H+ G +E M + ++K+ C + Y
Sbjct: 460 AANELFQELKENCGSSSVRV-YAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDV-YAYNA 517
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
++ +V+ ++EA + E + D NIIL G ++ G ++A + ++
Sbjct: 518 LITGMVRADMMDEAFSLFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSST 577
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
P S++ + + E+A + MKE
Sbjct: 578 IKPDAVSYNTVLGCLSRAGLFEEATKLMKE 607
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 100/226 (44%), Gaps = 4/226 (1%)
Query: 155 ESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICI 214
E+ S +++MK+ G S+ Y+ ++ + T + EK +L +M E G PP +Y I
Sbjct: 390 EASSWLERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLI 449
Query: 215 NSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVS 274
NS G + + QE++ S Y+ + ++ G +A+ + + +
Sbjct: 450 NSLGKAKRYEAANELFQELKENCG-SSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKL-G 507
Query: 275 KSKDALGYNHLISHYASLGNKDEMMK-FWGLQKIKCKKQLNRDYITMLGSLVKIGELEEA 333
D YN LI+ DE F +++ C +N I +L L + G + A
Sbjct: 508 CIPDVYAYNALITGMVRADMMDEAFSLFRTMEENGCNPDINSHNI-ILNGLARTGGPKRA 566
Query: 334 EKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
+M + + S D N +L S+ G+ E+A ++KE+ KG
Sbjct: 567 MEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEATKLMKEMNSKG 612
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 3/177 (1%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I L KR++ A ++ + + + SV +AV + GK A FN +
Sbjct: 448 LINSLGKAKRYEAANELFQELKENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLG 507
Query: 135 KVDKLYG--ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+ +Y AL+ VR ++DE+ SL + M+E G ++N I+ TG ++
Sbjct: 508 CIPDVYAYNALITGMVRADMMDEAFSLFRTMEENGCNPDINSHNIILNGLARTGGPKRAM 567
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTV 249
++ MK + + PD SY + +++EM S+ D TYS++
Sbjct: 568 EMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEATKLMKEMNSKG-FEYDLITYSSI 623
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/315 (20%), Positives = 133/315 (42%), Gaps = 8/315 (2%)
Query: 95 MSGQGLAFS-VHDHAVQLDLIGKVRGLESAETYFNSL--NDEDKVDKLYGALLNCYVREG 151
M +G F ++ + GK+ +SA F+ + N K+Y L+ Y + G
Sbjct: 221 MCSEGHCFPDTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLG 280
Query: 152 LVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYR 211
V+E+L+L+ +M+ + Y ++ +G+ E V +M ++G PD
Sbjct: 281 KVEEALNLVHEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMN 340
Query: 212 ICINSYGARSELSSMENVLQEMESQSHISMDWGTYST-VANYYIIAGLKEKAIIYLKKC- 269
IN G L + +EM + + + TY+T + + + +A +L++
Sbjct: 341 NLINILGRSDRLKEAVELFEEMR-LLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMK 399
Query: 270 EDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGE 329
+D V S + Y+ LI + ++ + K Y +++ SL K
Sbjct: 400 KDGVVPS--SFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKR 457
Query: 330 LEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSI 389
E A ++ +E + +C RV +++ + + G +A + E+ K G P +++
Sbjct: 458 YEAANELFQELKENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNA 517
Query: 390 IAAGYADKNNMEKAF 404
+ G + M++AF
Sbjct: 518 LITGMVRADMMDEAF 532
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 88/210 (41%), Gaps = 2/210 (0%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L++ + + V+++L L+++M E G Y ++ ++E ++ ++K
Sbjct: 410 YSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELK 469
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
EN Y + I +G + + EM+ I D Y+ + + A +
Sbjct: 470 ENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIP-DVYAYNALITGMVRADMM 528
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
++A + E+ + D +N +++ A G M+ + K K Y T
Sbjct: 529 DEAFSLFRTMEE-NGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNT 587
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDF 349
+LG L + G EEA K+++E + YD
Sbjct: 588 VLGCLSRAGLFEEATKLMKEMNSKGFEYDL 617
>gi|302798915|ref|XP_002981217.1| hypothetical protein SELMODRAFT_420704 [Selaginella moellendorffii]
gi|300151271|gb|EFJ17918.1| hypothetical protein SELMODRAFT_420704 [Selaginella moellendorffii]
Length = 541
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/443 (18%), Positives = 187/443 (42%), Gaps = 44/443 (9%)
Query: 53 LTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEW-MSGQGLAFSVHDHAVQL 111
+ L W EG ++ + ++I +L +R + +++ W + + + DH V++
Sbjct: 125 IVAALKDWQSEGNLVTRDVIYKLIIRLHARMFYFQGMKLMNWVIVEKPFQLTDFDHLVRM 184
Query: 112 DLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGS 171
D + ++ T FN + +DK + Y LL + + +L ++++MKE+ +
Sbjct: 185 DFHTRELKVDKVLTCFNRI--QDKTETCYVLLLQAFATAHRKERALDVLKQMKELVLITN 242
Query: 172 ALNYNGIMCLYTNTGQHEKIPDVLLDMKE-NGVPPDNFSYRICINSYGARSELSSMENVL 230
+ +YN ++ +Y G ++ ++ ++K+ + V PD F+Y L
Sbjct: 243 SYSYNLVIAMYLRMGLIDEAKEMFAELKDKSNVAPDAFTY-------------------L 283
Query: 231 QEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYA 290
++S+ + MD T+ +++ V K + +LI Y
Sbjct: 284 NLLKSRDALGMD-DLEDTIEEFFL-----------------DVDKIPTGFEWRNLIRLYG 325
Query: 291 SLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFR 350
++G K ++ + W QK + ++ + S GE+++ E++ ++ E R
Sbjct: 326 AMGKKKDVERLWREQKRVAEYMPESYFLAAIESFGMNGEMKQFEEICKQLEAQNQKLSER 385
Query: 351 VPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEA 410
+L Y G++ A+ K++ + + + +GY +++ KA E EA
Sbjct: 386 QCFTMLKVYCMNGLMNDAERTAKKMEELRYKLGFKGYHYLVSGYVNRHQFVKATEKFSEA 445
Query: 411 LAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSS-LKIKVQKRN--MYHALTEAH 467
F P V ++L+ +++E+ E V LK K + +++AL + +
Sbjct: 446 EEKGLAKGFKNPLFVTVLTLLEAYAGKKELEKAEEMVEKVLKTKHYPYDIRLFNALLKVY 505
Query: 468 IRSGQEVDGLLESMKADDIDEDK 490
R + G+ +K ++ ++
Sbjct: 506 RRCQKPAWGIENRIKEAKLEPNE 528
>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 156/362 (43%), Gaps = 30/362 (8%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ +++ Y + GL D + S M + G +YN ++ G E+ ++ DM+
Sbjct: 188 FNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDME 247
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ G+ PD +Y+I + +S ++Q+M + + D TY+ + + G
Sbjct: 248 KQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNI 307
Query: 260 EKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
E+A L+ D++S + + Y+ L+S G DE ++ L +++ L D
Sbjct: 308 EEA---LRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQL--LYEME-ANNLQPDL 361
Query: 318 IT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNI-----ILLGYSQKGMIEKAD 369
+T ++ L K G++++A ++ +E C++ PN IL G +KGM+ A
Sbjct: 362 VTYSILIHGLCKQGKVQQAIQLYKEM-----CFNRIFPNSFAHSGILKGLCEKGMLSDAR 416
Query: 370 AVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSS 429
++ P ++I+ GY ++E+A K +K P +S
Sbjct: 417 MYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRL-----RDKAITPSIVTFNS 471
Query: 430 ILDWLGDNRDVEEVEAFVSSLKIKVQKRN--MYHALTEAHIRSG--QEVDGLLESMKADD 485
++ NR V E + S+K+ + + Y L A+ G ++ LL M D
Sbjct: 472 LIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKD 531
Query: 486 ID 487
I+
Sbjct: 532 IE 533
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 137/317 (43%), Gaps = 12/317 (3%)
Query: 171 SALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVL 230
S +++N IM Y G + M + G+ PD +SY I I+ + +
Sbjct: 184 SVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELT 243
Query: 231 QEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYA 290
+ME Q + D TY VA + + GL A ++K D + Y LI +
Sbjct: 244 NDMEKQG-LQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHC 302
Query: 291 SLGNKDEMMKFWGLQKIKCKKQLNRD-YITMLGSLVKIGELEEAEKMLEEWELSCYCYDF 349
+GN +E ++ + QLN Y +L SL K G+++EA ++L E E + D
Sbjct: 303 QMGNIEEALRLRR-DLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDL 361
Query: 350 RVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
+I++ G ++G +++A + KE+ P + S I G +K + A
Sbjct: 362 VTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDS 421
Query: 410 ALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNM--YHALTEAH 467
+ + RP +L + ++D DVEE L+ K ++ +++L
Sbjct: 422 LIMSN-----LRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGF 476
Query: 468 IRSGQEVDG--LLESMK 482
++ + V+ LLES+K
Sbjct: 477 CKNRKVVEARRLLESIK 493
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 150/347 (43%), Gaps = 33/347 (9%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
LY LL+ + G VDE+L L+ +M+ + Y+ ++ G+ ++ + +M
Sbjct: 328 LYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEM 387
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
N + P++F++ + + LS + S++ D Y+ + + Y+ G
Sbjct: 388 CFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSL-IMSNLRPDVTLYNIMIDGYVKLGD 446
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKD--------EMMKFWGLQKIKCK 310
E+A+ K+ D + + + +N LI Y N+ E +K GL+
Sbjct: 447 VEEAVRLYKRLRD-KAITPSIVTFNSLI--YGFCKNRKVVEARRLLESIKLHGLEPSAVT 503
Query: 311 KQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADA 370
Y T++ + + G + + ++L E L +++ G ++ +E++
Sbjct: 504 ------YTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQ 557
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSI 430
+L+++ KG P +++ I + +M KAFE + + L +H P P+ + +
Sbjct: 558 LLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDML-IHN----LEPTPATYNVL 612
Query: 431 LDWLGDNRDVEEVEAFVSSLKIKVQKRNM------YHALTEAHIRSG 471
+D L DVE+ + + SL Q RN+ Y + +AH G
Sbjct: 613 IDGLCRYGDVEDADRVLVSL----QDRNINLTKVAYTTMIKAHCVKG 655
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 128/283 (45%), Gaps = 24/283 (8%)
Query: 120 LESAETYFNSL---NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYN 176
L A YF+SL N V LY +++ YV+ G V+E++ L +++++ S + +N
Sbjct: 412 LSDARMYFDSLIMSNLRPDV-TLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFN 470
Query: 177 GIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQ 236
++ + + + +L +K +G+ P +Y +N+Y ++ + +L EM +
Sbjct: 471 SLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLK 530
Query: 237 SHISMDWGTYSTVANYYIIAGL--KEKAIIYLKKCEDIVSK--SKDALGYNHLISHYASL 292
I TY+ V I GL + K ++ ED+ +K + D + YN +I +
Sbjct: 531 D-IEPTVVTYTVV-----IKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKA 584
Query: 293 GNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWE-----LSCYCY 347
+ + + I + Y ++ L + G++E+A+++L + L+ Y
Sbjct: 585 KDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAY 644
Query: 348 DFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSII 390
++ + KG ++A V ++V+KG + +S +
Sbjct: 645 -----TTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAV 682
Score = 42.0 bits (97), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 48/266 (18%), Positives = 105/266 (39%), Gaps = 41/266 (15%)
Query: 148 VREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDN 207
V +V ++L ++ KMKE S YN ++ N + + DV D+K++G P
Sbjct: 94 VASRMVHDALFVLVKMKEQNLRPSIQTYNSLL---YNLRHTDIMWDVYNDIKDSGTPQSA 150
Query: 208 FSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLK 267
+ I ++ +S A+++L+
Sbjct: 151 RTSSIIVDGLCGQSRF------------------------------------RDAVLFLR 174
Query: 268 KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKI 327
+ D + + +N ++S Y LG D F+ + Y ++ L+
Sbjct: 175 Q-NDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVA 233
Query: 328 GELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK-KGKTPTPNS 386
G +EEA ++ + E D I+ G+ G++ A ++++++ +G P +
Sbjct: 234 GSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVT 293
Query: 387 WSIIAAGYADKNNMEKAFECMKEALA 412
++++ G+ N+E+A ++ L+
Sbjct: 294 YTVLICGHCQMGNIEEALRLRRDLLS 319
>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 130/276 (47%), Gaps = 14/276 (5%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ L+N +EG V ++ + ++++ G +A+++N ++ Y +G E+ + + M+
Sbjct: 235 FNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVME 294
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E V PD F+Y I+ +L ++ +EM + + D T++T+ N G
Sbjct: 295 EFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDV-TFTTLINGQCKNGRV 353
Query: 260 EKAI-IYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
+ A+ IY + + +K D + YN LI G E KF G K+ L D
Sbjct: 354 DLALEIY----QQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMT---KRGLIPD 406
Query: 317 ---YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
Y T+L K G+LE A +M +E D I+ G + G I A+ L+
Sbjct: 407 KFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLR 466
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
E+++ G P +++++ G+ K +++ F+ +KE
Sbjct: 467 EMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKE 502
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 120/296 (40%), Gaps = 43/296 (14%)
Query: 104 VHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV--DKLYGALLNCYVREGLVDESLSLMQ 161
V ++ +D + K LE A F + D V D + L+N + G VD +L + Q
Sbjct: 302 VFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQ 361
Query: 162 KMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARS 221
+M G + YN ++ G + + +M + G+ PD F+Y ++
Sbjct: 362 QMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEG 421
Query: 222 ELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCED--IVSKSKDA 279
+L + +EM + I +D VA II+GL C D IV +
Sbjct: 422 DLELALEMRKEMVKEG-IQLD-----NVAFTAIISGL----------CRDGKIVDAERTL 465
Query: 280 LGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEE 339
EM++ GL K + Y ++ K G+++ K+L+E
Sbjct: 466 ----------------REMLR-AGL------KPDDGTYTMVMDGFCKKGDVKMGFKLLKE 502
Query: 340 WELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYA 395
+ + N+++ G ++G ++ AD +L ++ G P +++I+ G+
Sbjct: 503 MQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHC 558
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 137 DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
D Y +++ + ++G V L+++M+ G + YN +M GQ K D+LL
Sbjct: 477 DGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQ-VKNADMLL 535
Query: 197 DMKEN-GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTV 249
+ N GV PD+ +Y I + + +L +NV EM S D+ +Y ++
Sbjct: 536 NAMLNLGVVPDDITYNILLQGHCKHGKLGDFQNVKTEMGLVS----DYASYRSL 585
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 99/236 (41%), Gaps = 10/236 (4%)
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV-DKL-YG 141
R AL++ + M +GL + + +D + K A + + + DK Y
Sbjct: 352 RVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYT 411
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
LL+ +EG ++ +L + ++M + G + + I+ G+ L +M
Sbjct: 412 TLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRA 471
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
G+ PD+ +Y + ++ + + ++ +L+EM+S HI TY+ + N G +
Sbjct: 472 GLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIP-GVITYNVLMNGLCKQGQVKN 530
Query: 262 AIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
A + L ++ D + YN L+ + G K Q +K + L DY
Sbjct: 531 ADMLLNAMLNL-GVVPDDITYNILLQGHCKHG------KLGDFQNVKTEMGLVSDY 579
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 92/429 (21%), Positives = 191/429 (44%), Gaps = 42/429 (9%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I K+ + A+++ E M +G ++ + V +D + K+ + +A+ + +
Sbjct: 63 LIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGG 122
Query: 135 KVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+ + +L++ + + G VD++ L+ M G + + Y+ ++ + + +
Sbjct: 123 FAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAK 182
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
+VL +MK +GV PD F+Y I+ ++ E +L+ M + S + D YS++ +
Sbjct: 183 EVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRM-AGSGCTPDVVVYSSIIHA 241
Query: 253 YIIAGL---KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
+ +G +K + ++K KS D + YN +I LG K Q I
Sbjct: 242 FCKSGKLLEAQKTLQEMRK----QRKSPDVVTYNTVIDGLCKLG------KIAEAQVILD 291
Query: 310 KKQLNRD-------YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQK 362
+ Q + D Y T++ L K L EA+K+L+ + D I+ G +
Sbjct: 292 QMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKC 351
Query: 363 GMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRP 422
G +E+A+ +L+ + + G P +++ + +G ++ EA V EE +
Sbjct: 352 GRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVD-------EAERVMEEMRNAGC 404
Query: 423 KPSLVS--SILDWLGDNRDVEEVEAFVSSLK--------IKVQKRNMYHALTEAHIRSGQ 472
P+LV+ ++++ L + ++E + V +K R + +AL + + Q
Sbjct: 405 PPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLV--Q 462
Query: 473 EVDGLLESM 481
E + LLE M
Sbjct: 463 EAEQLLEQM 471
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 93/438 (21%), Positives = 185/438 (42%), Gaps = 54/438 (12%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCY 147
AL++ E M G A H + + L+ A + S+ + V Y AL+ +
Sbjct: 9 ALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNV-VTYTALIAAF 67
Query: 148 VREGLVDESLSLMQKMKEMGSFGSALNYNGI---MCLYTNTGQHEKI----------PDV 194
R ++E++ L+++M+E G + + YN + +C + G + + P+V
Sbjct: 68 ARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNV 127
Query: 195 -----LLD-----------------MKENGVPPDNFSYRICINSYGARSELSSMENVLQE 232
L+D M G+ P+ +Y I+ + + VL+E
Sbjct: 128 MTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEE 187
Query: 233 MESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASL 292
M++ S ++ D TYS + + A E+A L++ + D + Y+ +I +
Sbjct: 188 MKA-SGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAG-SGCTPDVVVYSSIIHAFCKS 245
Query: 293 GNKDEMMKFWGLQKIKCKKQLNRD---YITMLGSLVKIGELEEAEKMLEEWELSC-YCYD 348
G E K LQ+++ K++ + D Y T++ L K+G++ EA+ +L++ + S D
Sbjct: 246 GKLLEAQKT--LQEMR-KQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPD 302
Query: 349 FRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMK 408
+ ++ G + M+ +A +L + K G P +++ I G +E+A
Sbjct: 303 VVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA----- 357
Query: 409 EALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNM--YHALTEA 466
E L + P ++++ L R V+E E + ++ N+ Y+ +
Sbjct: 358 EYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNG 417
Query: 467 HIRSGQ--EVDGLLESMK 482
SG+ E L++ MK
Sbjct: 418 LCVSGRIKEAQQLVQRMK 435
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 127/309 (41%), Gaps = 26/309 (8%)
Query: 151 GLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSY 210
G + +L L+++MK G A + I+ N G + D L M G P+ +Y
Sbjct: 4 GDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTY 60
Query: 211 RICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCE 270
I ++ +L +L+EM + G + Y ++ K + + +
Sbjct: 61 TALIAAFARAKKLEEAMKLLEEMR-------ERGCPPNLVTYNVLVDALCK-LSMVGAAQ 112
Query: 271 DIVSK------SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSL 324
D+V K + + + +N L+ + GN D+ K G+ K + Y ++ L
Sbjct: 113 DVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGL 172
Query: 325 VKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTP 384
K + EA+++LEE + S D + ++ G + IE+A+ +L+ + G TP
Sbjct: 173 CKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDV 232
Query: 385 NSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVS--SILDWLGDNRDVEE 442
+S I + + EA +E + R P +V+ +++D L + E
Sbjct: 233 VVYSSIIHAFCKSGK-------LLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAE 285
Query: 443 VEAFVSSLK 451
+ + ++
Sbjct: 286 AQVILDQMQ 294
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 121/267 (45%), Gaps = 26/267 (9%)
Query: 157 LSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINS 216
L L+++M+ G + YNG++ L TG+ + VL +M G+ PD Y I+
Sbjct: 208 LKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDG 267
Query: 217 YGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYL--KKCEDIVS 274
+ +SS + EM+ + IS D+ TY+ V I GL + + K ++V
Sbjct: 268 FCKLGNVSSAYRLFDEMQKRK-ISPDFITYTAV-----ICGLCQTGRVMEADKLFHEMVC 321
Query: 275 K--SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT---MLGSLVKIGE 329
K D + Y LI Y G +M + + L + L + +T + L K GE
Sbjct: 322 KRLEPDEVTYTALIDGYCKEG---KMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGE 378
Query: 330 LEEAEKMLEEW-----ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTP 384
++ A ++L E EL+ Y Y N ++ G + G I++A ++K++ G P
Sbjct: 379 VDTANELLHEMCRKGLELNIYTY-----NSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDA 433
Query: 385 NSWSIIAAGYADKNNMEKAFECMKEAL 411
+++ + Y M +A E +++ L
Sbjct: 434 VTYTTLMDAYCKSREMVRAHELLRQML 460
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 137/327 (41%), Gaps = 18/327 (5%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDK--LYGALLN 145
L++ E M +GL + + + + L+ K + AE + E +Y L++
Sbjct: 207 VLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLID 266
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
+ + G V + L +M++ + Y ++C TG+ + + +M + P
Sbjct: 267 GFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEP 326
Query: 206 DNFSYRICINSY---GARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
D +Y I+ Y G E S+ N + +M +I TY+ +A+ G + A
Sbjct: 327 DEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIV----TYTALADGLCKCGEVDTA 382
Query: 263 IIYLKK-CEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITML 321
L + C + YN L++ GN D+ +K ++ Y T++
Sbjct: 383 NELLHEMCRK--GLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLM 440
Query: 322 GSLVKIGELEEAEKMLEEW---ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
+ K E+ A ++L + EL F N+++ G+ GM+E + +LK +++K
Sbjct: 441 DAYCKSREMVRAHELLRQMLDRELQPTVVTF---NVLMNGFCMSGMLEDGEKLLKWMLEK 497
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAFE 405
G P +++ + Y +NNM E
Sbjct: 498 GIMPNATTYNSLIKQYCIRNNMRATTE 524
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 120/308 (38%), Gaps = 28/308 (9%)
Query: 101 AFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL---------------YGALLN 145
AFS+H+ +Q+ L + + + D ++L Y +L+N
Sbjct: 347 AFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVN 406
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
+ G +D+++ LM+ M+ G A+ Y +M Y + + + ++L M + + P
Sbjct: 407 GLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQP 466
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTY-STVANYYIIAGLKEKAII 264
++ + +N + L E +L+ M + I + TY S + Y I ++ I
Sbjct: 467 TVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKG-IMPNATTYNSLIKQYCIRNNMRATTEI 525
Query: 265 YLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN---RDYITML 321
Y C V D YN LI + N M + W L + K N Y ++
Sbjct: 526 YRGMCAKGV--VPDGNTYNILIKGHCKARN---MKEAWFLHRDMVGKGFNLTVSSYNALI 580
Query: 322 GSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK--- 378
K + EA ++ E+ D + NI +G +E + E ++K
Sbjct: 581 KGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLV 640
Query: 379 GKTPTPNS 386
G T N+
Sbjct: 641 GDIQTKNT 648
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 110/269 (40%), Gaps = 45/269 (16%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y AL++ Y +EG + E+ SL +M +M
Sbjct: 331 YTALIDGYCKEGKMKEAFSLHNQMLQM--------------------------------- 357
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G+ P+ +Y + E+ + +L EM + + ++ TY+++ N AG
Sbjct: 358 --GLTPNIVTYTALADGLCKCGEVDTANELLHEM-CRKGLELNIYTYNSLVNGLCKAGNI 414
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
++A+ +K E + DA+ Y L+ Y EM++ L + ++L +T
Sbjct: 415 DQAVKLMKDME-VAGFHPDAVTYTTLMDAYCK---SREMVRAHELLRQMLDRELQPTVVT 470
Query: 320 ---MLGSLVKIGELEEAEKMLEEWEL-SCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
++ G LE+ EK+L +W L + N ++ Y + + + + +
Sbjct: 471 FNVLMNGFCMSGMLEDGEKLL-KWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGM 529
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
KG P N+++I+ G+ NM++A+
Sbjct: 530 CAKGVVPDGNTYNILIKGHCKARNMKEAW 558
>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/344 (19%), Positives = 157/344 (45%), Gaps = 8/344 (2%)
Query: 70 LELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFN- 128
+E R++ + K+++ + + + M +G+ ++V ++ ++ + ++ + F
Sbjct: 41 IEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSILINCFCFLHHVDYGFSVFGK 100
Query: 129 SLNDEDKVDK-LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQ 187
+L K D ++ L++ R G + + L+++M +G + N +M Y + G+
Sbjct: 101 TLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGK 160
Query: 188 HEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYS 247
+K+ + M G+ PD +SY I IN Y ++ + EM S + + TY+
Sbjct: 161 IDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEM-SHRGVVPNAVTYN 219
Query: 248 TVANYYIIA-GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMK-FWGLQ 305
T+ A ++ +++ K C S D L Y+ L+ + GN DEM+ F +Q
Sbjct: 220 TLIKALCQALRPRDAQVLFRKMCA--CGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQ 277
Query: 306 KIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMI 365
+ K L Y ++ + + ++++A+++L + D ++ G ++G I
Sbjct: 278 RRLVKPDLVV-YTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSI 336
Query: 366 EKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
+A + +++ + G P S++++ G N+ + + E
Sbjct: 337 IEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHE 380
>gi|15226907|ref|NP_181058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100538|sp|O82178.1|PP186_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g35130
gi|3668091|gb|AAC61823.1| hypothetical protein [Arabidopsis thaliana]
gi|330253974|gb|AEC09068.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 591
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 125/281 (44%), Gaps = 26/281 (9%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y AL+N + REGL +++ + ++++E G YN +M Y+ G ++ M+
Sbjct: 302 YTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQ 361
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G PD SY I +++YG S E V +EM+ G T+ ++ ++
Sbjct: 362 HMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKR-------LGIAPTMKSHMLLLSAY 414
Query: 260 EKAIIYLKKCEDIVSK------SKDALGYNHLISHYASLGNKDEMMKFWG-LQKIKCKKQ 312
KA + KCE IV + D N +++ Y LG +M K ++ C
Sbjct: 415 SKARD-VTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTAD 473
Query: 313 LNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNII-----LLGYSQKGMIEK 367
++ Y ++ K G LE E++ E + +FR P+++ + YS+K + K
Sbjct: 474 IS-TYNILINIYGKAGFLERIEELFVELKEK----NFR-PDVVTWTSRIGAYSRKKLYVK 527
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMK 408
V +E++ G P + ++ + + + +E+ ++
Sbjct: 528 CLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLR 568
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 69/179 (38%), Gaps = 40/179 (22%)
Query: 121 ESAETYFNSLNDEDKVDK---LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNG 177
E AE F L ED ++ +Y AL+ Y R G + + M+ MG +YN
Sbjct: 316 EKAEEIFEQLQ-EDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNI 374
Query: 178 IMCLYTNTGQHE-----------------------------------KIPDVLLDMKENG 202
++ Y G H K ++ +M ENG
Sbjct: 375 MVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENG 434
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
V PD F +N YG + + ME +L EME+ + D TY+ + N Y AG E+
Sbjct: 435 VEPDTFVLNSMLNLYGRLGQFTKMEKILAEMEN-GPCTADISTYNILINIYGKAGFLER 492
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 72/377 (19%), Positives = 142/377 (37%), Gaps = 58/377 (15%)
Query: 120 LESAETYFNSLNDEDKVDKLYGALL-NCYV-----REGLVDESLSLMQKMKEMGSFGSAL 173
+E AE + + K G + N Y+ R+G +E++ + Q+MK +
Sbjct: 206 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 265
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
YN ++ LY + + +M+ + P+ +Y +N++ E + +++
Sbjct: 266 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 325
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKA--IIYLKK---CEDIVSKSKDALGYNHLISH 288
+ + + D Y+ + Y AG A I L + CE D YN ++
Sbjct: 326 Q-EDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCE------PDRASYNIMVDA 378
Query: 289 YASLGNKD------EMMKFWGLQK------------------IKCK---KQLNRDYI--- 318
Y G E MK G+ KC+ K+++ + +
Sbjct: 379 YGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPD 438
Query: 319 -----TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
+ML ++G+ + EK+L E E D NI++ Y + G +E+ + +
Sbjct: 439 TFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFV 498
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDW 433
E+ +K P +W+ Y+ K K E +E + + P +L
Sbjct: 499 ELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMI-----DSGCAPDGGTAKVLLSA 553
Query: 434 LGDNRDVEEVEAFVSSL 450
VE+V + + ++
Sbjct: 554 CSSEEQVEQVTSVLRTM 570
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 119/295 (40%), Gaps = 52/295 (17%)
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENV-LQEMESQSHISMDWGTYSTVANYYIIA 256
++++ PD + + I++YG + + E++ +Q +ES+ + D TY+ + Y +A
Sbjct: 146 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTED--TYALLIKAYCMA 203
Query: 257 GLKEKAIIYLKKCED--IVSKSKDALGYNHLISHYASL-GNKDE---------------- 297
GL E+A + L + ++ + K+ YN I GN +E
Sbjct: 204 GLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPT 263
Query: 298 ------MMKFWG--------------LQKIKCKKQLNRDYITMLGSLVKIGELEEAEKML 337
M+ +G ++ +CK + Y ++ + + G E+AE++
Sbjct: 264 TETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNIC-TYTALVNAFAREGLCEKAEEIF 322
Query: 338 EEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADK 397
E+ + D V N ++ YS+ G A + + G P S++I+ Y
Sbjct: 323 EQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRA 382
Query: 398 NNMEKAFECMKEALAVHEENKFWRPKPSLVSS--ILDWLGDNRDVEEVEAFVSSL 450
+A AV EE K P++ S +L RDV + EA V +
Sbjct: 383 G-------LHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEM 430
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 161/375 (42%), Gaps = 46/375 (12%)
Query: 34 VARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSE 93
V+ N L + +S G+ D + +++Q + G K+S +IR ++ F+ A +
Sbjct: 243 VSYNVLVNGLSGKGEFDRA-KELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRR 301
Query: 94 WMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREG 151
M G+G +V + + + ++ + A Y + + +ED + L Y L+ Y R G
Sbjct: 302 EMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLG 361
Query: 152 LVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYR 211
E+L L +++ S + YN ++ TG + + DM ++G+ PD ++
Sbjct: 362 NFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFT 421
Query: 212 ICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCED 271
I + + L + + EM S+ GLK I Y +
Sbjct: 422 ILVRGFCQMGNLPMAKELFDEMLSR--------------------GLKPDCIAYTTR--- 458
Query: 272 IVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT---MLGSLVKIG 328
IV + K LGN K +G+++ + D IT ++ L K+G
Sbjct: 459 IVGELK--------------LGNPS---KAFGMKEEMKAEGFPPDLITYNVLINGLCKLG 501
Query: 329 ELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWS 388
++A +++++ L D I+ + G++ KA+ V +++KKG P+ +++
Sbjct: 502 NFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYT 561
Query: 389 IIAAGYADKNNMEKA 403
++ YA + ++ A
Sbjct: 562 VLIHSYAVRGRLDFA 576
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/359 (20%), Positives = 149/359 (41%), Gaps = 32/359 (8%)
Query: 134 DKVDKLYGALLNCYVR---------------EGLVDESLSLMQKMKEMGSFGSALNYNGI 178
++V+++Y ++ C +R EG V ++ ++ M+ G + ++YN +
Sbjct: 189 NEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVL 248
Query: 179 MCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSH 238
+ + G+ ++ +++ M G+ +Y I + + ++ +EM +
Sbjct: 249 VNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGA 308
Query: 239 ISMDWGTYSTVANYYIIAGLKEKAIIYLKKC--EDIVSKSKDALGYNHLISHYASLGNKD 296
+ TY+T+ G A YL ED++ D + YN LI Y+ LGN
Sbjct: 309 LP-TVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMP---DLVSYNTLIYGYSRLGNFA 364
Query: 297 EMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIIL 356
E + + + K Y T++ + G L+ A+ M ++ C D I++
Sbjct: 365 EALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILV 424
Query: 357 LGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEE 416
G+ Q G + A + E++ +G P +++ G N KAF + EE
Sbjct: 425 RGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAF-------GMKEE 477
Query: 417 NKFWRPKPSLVS--SILDWLGDNRDVEEVEAFVSSLKIK--VQKRNMYHALTEAHIRSG 471
K P L++ +++ L + ++ V ++++ V Y ++ AH+ SG
Sbjct: 478 MKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISG 536
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+N + G D++ L+QKM+ G + Y I+ + +G K +V DM
Sbjct: 490 YNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDML 549
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTV 249
+ G+ P +Y + I+SY R L + EM+ + +S + TY+ +
Sbjct: 550 KKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKG-VSPNVITYNAL 598
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 76/370 (20%), Positives = 141/370 (38%), Gaps = 63/370 (17%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
VLD + G +++ ++ L + F A ++ E MS GL S H
Sbjct: 229 VLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHT--------- 279
Query: 116 KVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNY 175
Y L+ + ++ + +E+ L ++M G+ + + Y
Sbjct: 280 ------------------------YNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTY 315
Query: 176 NGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMES 235
N IM G+ L M + PD SY I Y + + E+ S
Sbjct: 316 NTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRS 375
Query: 236 QSHISMDWGTYSTV-------ANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISH 288
++ + TY+T+ N I G+K+ I + C D+V+ + L+
Sbjct: 376 KNLVP-SVVTYNTLIDGGCRTGNLDIAKGMKDDMIKH-GLCPDVVT-------FTILVRG 426
Query: 289 YASLGNK-------DEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWE 341
+ +GN DEM+ GL K C Y T + +K+G +A M EE +
Sbjct: 427 FCQMGNLPMAKELFDEMLS-RGL-KPDCIA-----YTTRIVGELKLGNPSKAFGMKEEMK 479
Query: 342 LSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNME 401
+ D N+++ G + G + A+ +++++ +G P +++ I + +
Sbjct: 480 AEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLR 539
Query: 402 KAFECMKEAL 411
KA E + L
Sbjct: 540 KAEEVFSDML 549
>gi|224136310|ref|XP_002326829.1| predicted protein [Populus trichocarpa]
gi|222835144|gb|EEE73579.1| predicted protein [Populus trichocarpa]
Length = 664
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 90/422 (21%), Positives = 174/422 (41%), Gaps = 27/422 (6%)
Query: 67 ISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETY 126
IS+ +V+R + S + A + W S G A + + LD++G+ L A +
Sbjct: 25 ISKTTFFQVLRFIASPPK---AFEFFNWASRNGFAHDSRSYFMMLDILGRNGNLNIARNF 81
Query: 127 FNSL----NDEDKV-DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCL 181
S+ N K+ D+ LL Y GL +E++ L MK G S + +N ++ +
Sbjct: 82 LFSIERRSNGSVKIEDRFCNTLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLI 141
Query: 182 YTNTGQHEKIPDVLLDMKEN-GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHIS 240
G+ V +M GV PD +++ I I + S + +EM S+ +
Sbjct: 142 LLKRGRTNMAHSVFDEMCGTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEM-SRFNCE 200
Query: 241 MDWGTYSTVANYYIIAGLKEKA--II--YLKKCEDIVSKSKDALGYNHLISHYASLGNKD 296
D TY+T+ + AG A ++ +KK +D+ S D + Y L+ Y D
Sbjct: 201 PDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDL---SPDVVTYTTLVRGYCMKQEID 257
Query: 297 EMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKML-EEWELSCYCYDFRVPNII 355
E + + + K + Y T++ L ++ + ++ +++L + D N +
Sbjct: 258 EALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTL 317
Query: 356 LLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHE 415
+ G ++A + K++ + P ++S++ + + E+A + + + +
Sbjct: 318 MNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDK---LSD 374
Query: 416 ENKFWR-----PKPSLVSSILDWLGDNRDVEEVE-AFVSSLKIKVQKRNMYHALTEAHIR 469
E+ R P + + I D+L N + E F +K Q Y L H +
Sbjct: 375 EDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKGTQDPPSYKTLIIGHCK 434
Query: 470 SG 471
G
Sbjct: 435 EG 436
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/333 (20%), Positives = 143/333 (42%), Gaps = 44/333 (13%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+Y L+ +++ +++ ++++MKE G YN ++ + + ++ L++M
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM 513
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
ENG+ P+ F+Y I+ Y SE +S + ++EM + N + GL
Sbjct: 514 VENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE----------CGVLPNKVLCTGL 563
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
+ Y KK E ++ Y ++ LG+ + Y
Sbjct: 564 INE---YCKK-EKVIEACS---AYRSMVDQ-GILGDA-------------------KTYT 596
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
++ L K ++++AE++ E D +++ G+S+ G ++KA ++ E+V++
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE 656
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNR 438
G TP ++++ G+ +EKA E + E ++V K P +I+D +
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDE-MSV----KGLHPNAVTYCTIIDGYCKSG 711
Query: 439 DVEEVEAFVSSLKIK--VQKRNMYHALTEAHIR 469
D+ E +K+K V +Y L + R
Sbjct: 712 DLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 79/414 (19%), Positives = 170/414 (41%), Gaps = 18/414 (4%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I + +++ A M QG+ + V ++ + K ++ AE F + +
Sbjct: 563 LINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622
Query: 135 KVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+ YG L+N + + G + ++ S+ +M E G + + YN ++ + +G+ EK
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
++L +M G+ P+ +Y I+ Y +L+ + EM+ + + D Y+T+ +
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP-DSFVYTTLVDG 741
Query: 253 YIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKI----- 307
E+AI + + S +N LI+ G + +K L ++
Sbjct: 742 CCRLNDVERAITIFGTNKKGCASSTAP--FNALINWVFKFGKTE--LKTEVLNRLMDGSF 797
Query: 308 -KCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIE 366
+ K + Y M+ L K G LE A+++ + + + +L GY + G
Sbjct: 798 DRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRA 857
Query: 367 KADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSL 426
+ V E + G P +S+I + + KA + + A + + + S
Sbjct: 858 EMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSIST 917
Query: 427 VSSILDWLGDNRDVEEVEAFVSSLKIKVQ----KRNMYHALTEAHIRSGQEVDG 476
++L ++E E + ++ +++Q + + E+ I S Q V+
Sbjct: 918 CRALLSGFAKVGEMEVAEKVMENM-VRLQYIPDSATVIELINESCISSNQRVEA 970
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 75/383 (19%), Positives = 149/383 (38%), Gaps = 54/383 (14%)
Query: 30 AVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHAL 89
+ P + + GD D + ++ + + G + + + +I+ RF A+
Sbjct: 414 VISPYTYGTVVKGMCSSGDLDGAYN-IVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAM 472
Query: 90 QVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVR 149
+V + M QG+A + Y +L+ +
Sbjct: 473 RVLKEMKEQGIAPDIF---------------------------------CYNSLIIGLSK 499
Query: 150 EGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFS 209
+DE+ S + +M E G +A Y + Y + + +M+E GV P+
Sbjct: 500 AKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVL 559
Query: 210 YRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC 269
IN Y + ++ + + M Q + D TY+ + N GL + +
Sbjct: 560 CTGLINEYCKKEKVIEACSAYRSMVDQGILG-DAKTYTVLMN-----GLFKNDKV--DDA 611
Query: 270 EDIVSK------SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT---M 320
E+I + + D Y LI+ ++ LGN M K + ++ L + I +
Sbjct: 612 EEIFREMRGKGIAPDVFSYGVLINGFSKLGN---MQKASSIFDEMVEEGLTPNVIIYNML 668
Query: 321 LGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGK 380
LG + GE+E+A+++L+E + + I+ GY + G + +A + E+ KG
Sbjct: 669 LGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728
Query: 381 TPTPNSWSIIAAGYADKNNMEKA 403
P ++ + G N++E+A
Sbjct: 729 VPDSFVYTTLVDGCCRLNDVERA 751
>gi|302826103|ref|XP_002994591.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
gi|300137362|gb|EFJ04342.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
Length = 599
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 114/268 (42%), Gaps = 41/268 (15%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
LY +LN + ++ LS ++K G +A Y I+ L+T G K D+L +M
Sbjct: 159 LYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEM 218
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
++GV P+ Y + ++ Y + ++ V ++M S AGL
Sbjct: 219 DKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVS--------------------AGL 258
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN--RD 316
K +I YN L+ + G D+ + L+ I+ + L
Sbjct: 259 KPDIVI-----------------YNILVHAFCKAGRMDKALGV--LENIEANRLLPTIET 299
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y ++L VK G +++A ++ + + + N +L G ++ +E A +L E++
Sbjct: 300 YTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEML 359
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAF 404
G P S++ + GYA ++EKAF
Sbjct: 360 ANGVVPNERSYTALTEGYARAGDVEKAF 387
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 122/311 (39%), Gaps = 11/311 (3%)
Query: 104 VHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKM 163
+H +A D+ G V E + LN+ ++ ++++ Y G + + +K
Sbjct: 59 IHAYAEARDMEGAVACTEEMLSQGIQLNE-----AVFCSIISGYASAGNNEAAEHWFEKF 113
Query: 164 KEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSEL 223
K + YN I+ Y G E + +L M+E G + Y +N + +E+
Sbjct: 114 KAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGF---AEI 170
Query: 224 SSMENVLQEME--SQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALG 281
E L +S TY + + AG KA+ L++ D S + +
Sbjct: 171 RDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEM-DKHGVSPNKMI 229
Query: 282 YNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWE 341
Y ++ YA G+ K W K Y ++ + K G +++A +LE E
Sbjct: 230 YAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIE 289
Query: 342 LSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNME 401
+ IL GY + G I+KA V I G P S++ + +G A ME
Sbjct: 290 ANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQME 349
Query: 402 KAFECMKEALA 412
A + E LA
Sbjct: 350 NARLMLNEMLA 360
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 70/152 (46%), Gaps = 2/152 (1%)
Query: 85 FKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV--DKLYGA 142
+ AL+V + + GL V + L + K R +E+A N + V ++ Y A
Sbjct: 313 IQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNERSYTA 372
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
L Y R G V+++ + Q+MK+ + Y ++ +G ++ +V + + G
Sbjct: 373 LTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQQITDAG 432
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEME 234
+ + +Y ++ + + ELS ++L +M+
Sbjct: 433 LKHNRITYCTMLDGWARKGELSKARDLLNDMQ 464
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 52/274 (18%), Positives = 106/274 (38%), Gaps = 39/274 (14%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ++L+ YV+ G + ++L + ++K G ++YN ++ Q E +L +M
Sbjct: 300 YTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEML 359
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
NGV P+ SY Y ++ + Q M+ + ++++D Y + +G
Sbjct: 360 ANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKE-NLAIDIVAYGALLKACCKSGAM 418
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR-DYI 318
++A ++ + DA G H NR Y
Sbjct: 419 QRA-------AEVFQQITDA-GLKH-----------------------------NRITYC 441
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
TML + GEL +A +L + + + D + + G E+ L + +K
Sbjct: 442 TMLDGWARKGELSKARDLLNDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREK 501
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
+++ + G+ + ++A C ++A A
Sbjct: 502 KLEVNARTYTTLIHGWLAAADPDQAISCYEQAKA 535
>gi|297797201|ref|XP_002866485.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312320|gb|EFH42744.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 983
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 101/459 (22%), Positives = 196/459 (42%), Gaps = 57/459 (12%)
Query: 43 ISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQG--- 99
I LG+ +V + +L++ + ++ + L V L S++ + AL E M G
Sbjct: 452 IDDLGNIEVKVESLLEEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTP 511
Query: 100 LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSL 159
L FS + L + L S L+ VD Y ++N + D + S+
Sbjct: 512 LPFSYNSVIKCLFQENIIEDLGSLVNLIQELDFVPDVDT-YLIVVNELCKNNDRDAAFSV 570
Query: 160 MQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGA 219
+ M+E+G + Y+ I+ G+ + + M E+G+ PD +Y I IN+Y
Sbjct: 571 IDVMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINAYAR 630
Query: 220 RSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKK-CEDIVSKSKD 278
+ +++E+ + + TY+ + + ++ G+ EK YL K ED S +
Sbjct: 631 NGRIDEANELVEEV-VKHFVRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLED--GLSPN 687
Query: 279 ALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSL-------------V 325
A+ Y LI H+ G+ +GL K + YIT+L L V
Sbjct: 688 AVLYTSLIGHFLKKGDFKFSFTLFGLMGENGIKHDHIAYITLLSGLWRAMARKKKRQVIV 747
Query: 326 KIGELEEAEKMLEEWEL----SCYC-YDFR--------------VPNI-----ILLGYSQ 361
+ G+ + +++L+ + S C Y + +PN+ I+ GY
Sbjct: 748 EPGKEKLLQRLLQTKPIVSISSSLCNYGSKSFAMEVIGKVKKSIIPNLYLHNTIVTGYCA 807
Query: 362 KGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWR 421
G +++A L+ + K+G P +++I+ + + ++E A + + EE K
Sbjct: 808 AGRLDEAYNHLESMQKEGIVPNQVTYTILMKSHIEAGDIESAID-------LFEETK-CE 859
Query: 422 PKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNMY 460
P + S++L L ++ ++A +L +++QK+ +Y
Sbjct: 860 PDQVMCSTLLKGLCESE--RPLDAL--ALMLEMQKKGIY 894
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 132/336 (39%), Gaps = 51/336 (15%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALN-YNGIMCLYTNTGQHEKIPDVLLDM 198
Y ++ Y +EG VD +L L + + ++ Y ++ + G +K D+L+ M
Sbjct: 346 YHVMIGSYCKEGNVDYALRLFENNTGVEDISRNVHCYTTLISGFYKKGGMDKAVDLLMRM 405
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
+NG+ PD+ +Y + + EL +LQ + +D G G+
Sbjct: 406 LDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSI-------LDNG-----------CGI 447
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
I L E V S + KD + GL + R+YI
Sbjct: 448 DPPVIDDLGNIEVKVE------------SLLEEIARKDANLAAVGLAVVTTALCSQRNYI 495
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
L + EKM+ L C F ++I + Q+ +IE +++ I +
Sbjct: 496 AALSRI---------EKMV---NLGCTPLPFSYNSVIKCLF-QENIIEDLGSLVNLIQEL 542
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLG-DN 437
P +++ I+ N+ + AF + V EE RP ++ SSI+ LG
Sbjct: 543 DFVPDVDTYLIVVNELCKNNDRDAAF----SVIDVMEELGL-RPTVAIYSSIIGSLGKQG 597
Query: 438 RDVEEVEAFVSSLKIKVQKRNM-YHALTEAHIRSGQ 472
R VE E F L+ +Q + Y + A+ R+G+
Sbjct: 598 RVVEAEETFAKMLESGIQPDEIAYMIMINAYARNGR 633
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/333 (19%), Positives = 150/333 (45%), Gaps = 6/333 (1%)
Query: 86 KHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGAL 143
KHA+++ + M +G V+ + + + K+ ++ A + + + D Y L
Sbjct: 312 KHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTL 371
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
++ +E V+E+ L + + G +N ++ T H ++ +M+ G
Sbjct: 372 ISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGC 431
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG-LKEKA 262
PD F+Y + I+S ++ +L N+L++ME S + TY+T+ + + A ++E
Sbjct: 432 EPDEFTYNMLIDSLCSKGKLDEALNMLKQME-LSGCARSVITYNTLIDGFCKANKIREAE 490
Query: 263 IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLG 322
I+ + ++ S++++ YN LI ++ + ++ +K Y ++L
Sbjct: 491 EIFDEM--EVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLT 548
Query: 323 SLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTP 382
+ G++++A +++ + D ++ G + G +E A +L+ I KG
Sbjct: 549 HFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIAL 608
Query: 383 TPNSWSIIAAGYADKNNMEKAFECMKEALAVHE 415
TP++++ + G K +A +E L +E
Sbjct: 609 TPHAYNPVIQGLFRKRKTTEAINLFREMLEQNE 641
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/363 (19%), Positives = 168/363 (46%), Gaps = 22/363 (6%)
Query: 137 DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
+K + ++ Y+ EG +D +L + ++M E G S ++ N I+ + G+ E + +
Sbjct: 224 EKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQ 283
Query: 197 DMK-ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYII 255
+M ++G PD +++ +N + ++ M + + D TY++V +
Sbjct: 284 EMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGY-DPDVYTYNSVISGLCK 342
Query: 256 AGLKEKAIIYLKKCEDIVSK--SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQL 313
G ++A+ +L + ++++ S + + YN LIS +L ++++ + L ++ K +
Sbjct: 343 LGEVKEAVEFL---DQMITRDCSPNTVTYNTLIS---TLCKENQVEEATELARVLTSKGI 396
Query: 314 NRDYIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADA 370
D T ++ L A ++ EE D N+++ KG +++A
Sbjct: 397 LPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALN 456
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSI 430
+LK++ G + +++ + G+ N + +A E E + VH ++ +++
Sbjct: 457 MLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDE-MEVHGVSR----NSVTYNTL 511
Query: 431 LDWLGDNRDVEEVEAFVSSLKIKVQKRN--MYHALTEAHIRSG--QEVDGLLESMKADDI 486
+D L +R VE+ + + ++ QK + Y++L R G ++ ++++M ++
Sbjct: 512 IDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGC 571
Query: 487 DED 489
+ D
Sbjct: 572 EPD 574
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 139/316 (43%), Gaps = 35/316 (11%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ALLN ++ ++E L+++M E G +YN ++ +G++E+ +L M
Sbjct: 200 YNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMI 259
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E PD +Y ++ + S++ E +L++M + + TY+T+ + A
Sbjct: 260 EKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGR-RCAPTVITYTTLIGGFSRADRL 318
Query: 260 EKAIIYLKKCEDIVSK--SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
A + ED+ S D + YN L+ G +E + L ++ +K D
Sbjct: 319 ADAYRVM---EDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHE---LLEVMVEKDCAPDV 372
Query: 318 IT---MLGSLVKIGELEEAEKMLEEW-ELSCYCYDFRVPNIILL-----GYSQKGMIEKA 368
+T ++ L K+G++++A +LE E C PN++ G+ + G +++
Sbjct: 373 VTYSILVNGLCKLGKVDDARLLLEMMLERGCQ------PNLVTFNTMIDGFCKAGKVDEG 426
Query: 369 DAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVS 428
VL+ + + TP ++S + GY N M+ AF + P + S
Sbjct: 427 HKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILG-----------ISPDKASYS 475
Query: 429 SILDWLGDNRDVEEVE 444
S+L+ L VEE +
Sbjct: 476 SMLEGLCSTGKVEEAQ 491
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 123/268 (45%), Gaps = 8/268 (2%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+Y L+ + G +D + ++++ M E + Y ++ T ++ ++ M
Sbjct: 129 VYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKM 188
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
KE+G+ PD +Y +N +++L + +L+EM ++ D +Y+TV +G
Sbjct: 189 KESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEM-VEAGREPDTFSYNTVVACLCESGK 247
Query: 259 KEKAIIYLKKCEDIVSK--SKDALGYNHLISHYASLGNKDEMMKFW-GLQKIKCKKQLNR 315
E+A L+K ++ K D + YN L+ + + DE + + +C +
Sbjct: 248 YEEAGKILEK---MIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVIT 304
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
Y T++G + L +A +++E+ + D N +L G + G +E+A +L+ +
Sbjct: 305 -YTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVM 363
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKA 403
V+K P ++SI+ G ++ A
Sbjct: 364 VEKDCAPDVVTYSILVNGLCKLGKVDDA 391
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 129/279 (46%), Gaps = 17/279 (6%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +L+ + +DE+ LM+KMKE G + YN ++ Q E++ +L +M
Sbjct: 165 YTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMV 224
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E G PD FSY + + +L++M + D TY+++ + +
Sbjct: 225 EAGREPDTFSYNTVVACLCESGKYEEAGKILEKM-IEKKCGPDVVTYNSLMDGFCKVSKM 283
Query: 260 EKAIIYLKKCEDIVSK--SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
++A L ED+V + + + Y LI ++ D + + + + K ++ D
Sbjct: 284 DEAERLL---EDMVGRRCAPTVITYTTLIGGFS---RADRLADAYRVMEDMFKAGISPDL 337
Query: 318 IT---MLGSLVKIGELEEAEKMLEEW-ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
+T +L L K G+LEEA ++LE E C D +I++ G + G ++ A +L+
Sbjct: 338 VTYNCLLDGLCKAGKLEEAHELLEVMVEKDCA-PDVVTYSILVNGLCKLGKVDDARLLLE 396
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNME---KAFECMKE 409
++++G P +++ + G+ ++ K E MKE
Sbjct: 397 MMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKE 435
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 138/332 (41%), Gaps = 55/332 (16%)
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YG 141
R A +V E M G++ + + LD + K LE A + ++D + Y
Sbjct: 317 RLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYS 376
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
L+N + G VD++ L++ M E G + + +N ++ + G+ ++ VL MKE
Sbjct: 377 ILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEV 436
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
PD +Y I+ Y N +Q+ + IS D +YS++ G E+
Sbjct: 437 SCTPDVVTYSTLIDGY-------CKANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEE 489
Query: 262 AIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITML 321
A ++ D+++K G SHYA ++
Sbjct: 490 A----QEVMDLMTKQ----GCPPTSSHYA----------------------------LII 513
Query: 322 GSLVKIGELEEAEKMLEEW-ELSC----YCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
G L + +EA KML+ E C Y Y +I++ G + +E A VL ++
Sbjct: 514 GGLCDVERGDEALKMLQVMSERGCEPNLYTY-----SILINGLCKTKRVEDAINVLDVML 568
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMK 408
+KG P +++ + G+ N M+ A++C K
Sbjct: 569 EKGCVPDVATYTSLIDGFCKINKMDAAYQCFK 600
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 8/189 (4%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ++L G V+E+ +M M + G ++ +Y I+ + + ++ +L M
Sbjct: 474 YSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMS 533
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E G P+ ++Y I IN + NVL M + + D TY+++ + +
Sbjct: 534 ERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVP-DVATYTSLIDGFCKINKM 592
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD--- 316
+ A K D D L YN LIS + GN ++ ++ L +K N D
Sbjct: 593 DAAYQCFKTMRD-SGCEPDKLAYNILISGFCQSGNVEKAIEVMQLML---EKGCNPDAAT 648
Query: 317 YITMLGSLV 325
Y +++ SL
Sbjct: 649 YFSLMRSLT 657
>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 138/309 (44%), Gaps = 13/309 (4%)
Query: 108 AVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYG--ALLNCYVREGLVDESLSLMQKMKE 165
+ + +G++ +E A+ F + E + ++ AL++ Y + G DE++ + + MK
Sbjct: 191 SAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKV 250
Query: 166 MGSFGSALNYNGIMCLYTNTG-QHEKIPDVLLDMKENGVPPDNFSYR--ICINSYGARSE 222
G + + YN ++ G + +++ ++ +M NGV PD +Y + + S G E
Sbjct: 251 SGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWE 310
Query: 223 LSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA--IIYLKKCEDIVSKSKDAL 280
+ N+ EM + I D TY+T+ + G + A I+ + I+ + +
Sbjct: 311 --AARNLFNEMIDRG-IDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILP---NVV 364
Query: 281 GYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEW 340
Y+ + YA G ++ + + K Y T+L K+G E+A K+ +E
Sbjct: 365 TYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEM 424
Query: 341 ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNM 400
S D N +L GY ++G + V KE+ K P ++S + Y+ +
Sbjct: 425 GSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLY 484
Query: 401 EKAFECMKE 409
E+A E +E
Sbjct: 485 EEAMEVFRE 493
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 152/352 (43%), Gaps = 11/352 (3%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
V + + EG + +I F A++V E M GL ++ + +D G
Sbjct: 209 VFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACG 268
Query: 116 K--VRGLESAETYFNSLNDEDKVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
K V E + L + + D++ Y +LL R GL + + +L +M + G
Sbjct: 269 KGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDV 328
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQE 232
YN ++ GQ + +++L+M + P+ +Y + Y L N+ E
Sbjct: 329 FTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNE 388
Query: 233 MESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYA 290
M+ I +D +Y+T+ + Y G E A LK C+++ S KD + YN L+ Y
Sbjct: 389 MKFLG-IGLDRVSYNTLLSIYAKLGRFEDA---LKVCKEMGSSGVKKDVVTYNALLDGYG 444
Query: 291 SLGNKDEMMK-FWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDF 349
G +E+ + F ++K + L Y T++ K EEA ++ E++ + D
Sbjct: 445 KQGKFNEVTRVFKEMKKDRVFPNL-LTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADV 503
Query: 350 RVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNME 401
+ + ++ + G+++ A +L E+ K+G P +++ I + E
Sbjct: 504 VLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAE 555
>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 138/309 (44%), Gaps = 13/309 (4%)
Query: 108 AVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYG--ALLNCYVREGLVDESLSLMQKMKE 165
+ + +G++ +E A+ F + E + ++ AL++ Y + G DE++ + + MK
Sbjct: 191 SAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKV 250
Query: 166 MGSFGSALNYNGIMCLYTNTG-QHEKIPDVLLDMKENGVPPDNFSYR--ICINSYGARSE 222
G + + YN ++ G + +++ ++ +M NGV PD +Y + + S G E
Sbjct: 251 SGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWE 310
Query: 223 LSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA--IIYLKKCEDIVSKSKDAL 280
+ N+ EM + I D TY+T+ + G + A I+ + I+ + +
Sbjct: 311 --AARNLFNEMIDRG-IDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILP---NVV 364
Query: 281 GYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEW 340
Y+ + YA G ++ + + K Y T+L K+G E+A K+ +E
Sbjct: 365 TYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEM 424
Query: 341 ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNM 400
S D N +L GY ++G + V KE+ K P ++S + Y+ +
Sbjct: 425 GSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLY 484
Query: 401 EKAFECMKE 409
E+A E +E
Sbjct: 485 EEAMEVFRE 493
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 152/352 (43%), Gaps = 11/352 (3%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
V + + EG + +I F A++V E M GL ++ + +D G
Sbjct: 209 VFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACG 268
Query: 116 K--VRGLESAETYFNSLNDEDKVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
K V E + L + + D++ Y +LL R GL + + +L +M + G
Sbjct: 269 KGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDV 328
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQE 232
YN ++ GQ + +++L+M + P+ +Y + Y L N+ E
Sbjct: 329 FTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNE 388
Query: 233 MESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYA 290
M+ I +D +Y+T+ + Y G E A LK C+++ S KD + YN L+ Y
Sbjct: 389 MKFLG-IGLDRVSYNTLLSIYAKLGRFEDA---LKVCKEMGSSGVKKDVVTYNALLDGYG 444
Query: 291 SLGNKDEMMK-FWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDF 349
G +E+ + F ++K + L Y T++ K EEA ++ E++ + D
Sbjct: 445 KQGKFNEVTRVFKEMKKDRVFPNL-LTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADV 503
Query: 350 RVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNME 401
+ + ++ + G+++ A +L E+ K+G P +++ I + E
Sbjct: 504 VLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAE 555
>gi|334184699|ref|NP_001189682.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330253975|gb|AEC09069.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 613
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 125/281 (44%), Gaps = 26/281 (9%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y AL+N + REGL +++ + ++++E G YN +M Y+ G ++ M+
Sbjct: 324 YTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQ 383
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G PD SY I +++YG S E V +EM+ G T+ ++ ++
Sbjct: 384 HMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKR-------LGIAPTMKSHMLLLSAY 436
Query: 260 EKAIIYLKKCEDIVSK------SKDALGYNHLISHYASLGNKDEMMKFWG-LQKIKCKKQ 312
KA + KCE IV + D N +++ Y LG +M K ++ C
Sbjct: 437 SKARD-VTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTAD 495
Query: 313 LNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNII-----LLGYSQKGMIEK 367
++ Y ++ K G LE E++ E + +FR P+++ + YS+K + K
Sbjct: 496 IS-TYNILINIYGKAGFLERIEELFVELKEK----NFR-PDVVTWTSRIGAYSRKKLYVK 549
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMK 408
V +E++ G P + ++ + + + +E+ ++
Sbjct: 550 CLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLR 590
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 69/179 (38%), Gaps = 40/179 (22%)
Query: 121 ESAETYFNSLNDEDKVDK---LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNG 177
E AE F L ED ++ +Y AL+ Y R G + + M+ MG +YN
Sbjct: 338 EKAEEIFEQLQ-EDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNI 396
Query: 178 IMCLYTNTGQHE-----------------------------------KIPDVLLDMKENG 202
++ Y G H K ++ +M ENG
Sbjct: 397 MVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENG 456
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
V PD F +N YG + + ME +L EME+ + D TY+ + N Y AG E+
Sbjct: 457 VEPDTFVLNSMLNLYGRLGQFTKMEKILAEMEN-GPCTADISTYNILINIYGKAGFLER 514
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 67/338 (19%), Positives = 130/338 (38%), Gaps = 53/338 (15%)
Query: 120 LESAETYFNSLNDEDKVDKLYG-ALLNCYV-----REGLVDESLSLMQKMKEMGSFGSAL 173
+E AE + + K G + N Y+ R+G +E++ + Q+MK +
Sbjct: 228 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 287
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
YN ++ LY + + +M+ + P+ +Y +N++ E + +++
Sbjct: 288 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 347
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKA--IIYLKK---CEDIVSKSKDALGYNHLISH 288
+ + + D Y+ + Y AG A I L + CE D YN ++
Sbjct: 348 Q-EDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCE------PDRASYNIMVDA 400
Query: 289 YASLGNKD------EMMKFWGLQK------------------IKCK---KQLNRDYI--- 318
Y G E MK G+ KC+ K+++ + +
Sbjct: 401 YGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPD 460
Query: 319 -----TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
+ML ++G+ + EK+L E E D NI++ Y + G +E+ + +
Sbjct: 461 TFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFV 520
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
E+ +K P +W+ Y+ K K E +E +
Sbjct: 521 ELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMI 558
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 119/295 (40%), Gaps = 52/295 (17%)
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENV-LQEMESQSHISMDWGTYSTVANYYIIA 256
++++ PD + + I++YG + + E++ +Q +ES+ + D TY+ + Y +A
Sbjct: 168 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTED--TYALLIKAYCMA 225
Query: 257 GLKEKAIIYLKKCED--IVSKSKDALGYNHLISHYASL-GNKDE---------------- 297
GL E+A + L + ++ + K+ YN I GN +E
Sbjct: 226 GLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPT 285
Query: 298 ------MMKFWG--------------LQKIKCKKQLNRDYITMLGSLVKIGELEEAEKML 337
M+ +G ++ +CK + Y ++ + + G E+AE++
Sbjct: 286 TETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNIC-TYTALVNAFAREGLCEKAEEIF 344
Query: 338 EEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADK 397
E+ + D V N ++ YS+ G A + + G P S++I+ Y
Sbjct: 345 EQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRA 404
Query: 398 NNMEKAFECMKEALAVHEENKFWRPKPSLVSS--ILDWLGDNRDVEEVEAFVSSL 450
+A AV EE K P++ S +L RDV + EA V +
Sbjct: 405 G-------LHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEM 452
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 99/477 (20%), Positives = 202/477 (42%), Gaps = 27/477 (5%)
Query: 26 RAYRAVKPVAR--NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRK 83
R +R + P AR N L R+S G+ + + + + G S +I L
Sbjct: 246 RNFRTL-PKARSCNFLLHRLSKSGNGQL-VRKFFNDMIGAGIAPSVFTYNVMIDYLCKEG 303
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YG 141
+++ ++ M GL+ V + +D GKV LE + FN + D V + Y
Sbjct: 304 DLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYN 363
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
L+NCY + + + +MK G + + Y+ ++ + G + + +DM+
Sbjct: 364 GLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRT 423
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG-LKE 260
G+ P+ F+Y I++ L+ +L +M Q+ + ++ TY+ + + AG + E
Sbjct: 424 GLLPNEFTYTSLIDANCKAGNLTEAWKLLNDM-LQAGVKLNIVTYTALLDGLCKAGRMIE 482
Query: 261 KAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITM 320
++ +D +S ++ Y L+ Y ++ MK Q +C + D I +
Sbjct: 483 AEEVFRSMLKDGISPNQQV--YTALVHGYIKAERMEDAMKILK-QMTEC--NIKPDLI-L 536
Query: 321 LGSLV----KIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
GS++ +LEE + +LEE + + + I+ Y + G A +E+
Sbjct: 537 YGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQ 596
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGD 436
G T ++ ++ G +E A + L++ +P ++ +S++D L
Sbjct: 597 DVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLG-----LQPNVAVYTSLIDGLCK 651
Query: 437 NRDVEEVEAFVSSLKIKVQKRNM--YHALTEAHIRSG--QEVDGLLESMKADDIDED 489
N +E + ++ + ++ + AL + +++ G QE L+ M I+ D
Sbjct: 652 NNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFD 708
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 143/334 (42%), Gaps = 46/334 (13%)
Query: 95 MSGQGLAFSVHDHAVQLDLIGKV-RGLESAETYFNSLNDEDKVDK-LYGALLNCYVREGL 152
M G+ ++ + LD + K R +E+ E + + L D ++ +Y AL++ Y++
Sbjct: 455 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAER 514
Query: 153 VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
+++++ ++++M E + Y I+ + + + E+ +L +MK G+ +
Sbjct: 515 MEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTT 574
Query: 213 CINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYII------AGLKEKAIIYL 266
I++Y + S N QEM+ D G +T+ Y ++ AG+ E A+ Y
Sbjct: 575 IIDAYFKAGKSSDALNFFQEMQ-------DVGVEATIVTYCVLIDGLCKAGIVELAVDYF 627
Query: 267 KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY--------- 317
C + +LG ++ Y SL + GL K C + + +
Sbjct: 628 --CRML------SLGLQPNVAVYTSLID--------GLCKNNCIESAKKLFDEMQCRGMT 671
Query: 318 --ITMLGSLV----KIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAV 371
IT +L+ K G L+EA ++ +D V ++ G+SQ G + +A
Sbjct: 672 PDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKF 731
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
E+++KG P + Y + +++A E
Sbjct: 732 FNEMIEKGILPEEVLCICLLREYYKRGQLDEAIE 765
>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
Length = 953
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 112/250 (44%), Gaps = 6/250 (2%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ ++LN V+ G + ++ M+KMK+ G + + Y ++ + E DV DM
Sbjct: 437 FSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDML 496
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
GV +NF +N + E + ++M + + +D Y+T+ + G
Sbjct: 497 HEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDM-GERGLLLDHVNYATLMDGLFKTGNM 555
Query: 260 EKAIIYLKKCEDIVSK--SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
A LK ++++ + S DA+ YN I+ LG E F + + Y
Sbjct: 556 PAA---LKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATY 612
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
TM+ + + G +A K+L E + S + +++G + G++EKA +L E+
Sbjct: 613 NTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMAS 672
Query: 378 KGKTPTPNSW 387
G TPTP ++
Sbjct: 673 AGFTPTPLTY 682
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 148/355 (41%), Gaps = 62/355 (17%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +++ REG ++L L+ +MK + + Y ++ G EK +L +M
Sbjct: 612 YNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMA 671
Query: 200 ENGVPPDNFSYRICINSY-GARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
G P +YR + + G+RS +E + E+ + + D Y+T+ + G+
Sbjct: 672 SAGFTPTPLTYRRVLQACSGSRSPYVILE--VHELMMGAGLHADITVYNTLVHVLCCHGM 729
Query: 259 KEKAIIYLKKCEDIVSK--SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCK-KQLNR 315
KA I L ++++ + + D + +N LI LG+ CK L+
Sbjct: 730 TRKATIVL---DEMLGRGIAPDTITFNALI-----LGH--------------CKSSHLDN 767
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
+ T +ML + LS F N +L G G I +AD V+ E+
Sbjct: 768 AFATY-------------AQMLHQG-LSPNIATF---NTLLGGLESAGRIGEADTVICEM 810
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLG 435
K G P ++ I+ GYA K+N +A E + +K + PK S +S++
Sbjct: 811 KKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMV-----SKGFIPKASTYNSLISDFA 865
Query: 436 DNRDVEEVEAFVSSLKIKVQKRNMYHALTE--------AHIRSGQEVDGLLESMK 482
+ + + S +K +R + H + + +R+G EV LL+ MK
Sbjct: 866 KAGMMNQAKELFSEMK----RRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMK 916
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 92/435 (21%), Positives = 175/435 (40%), Gaps = 53/435 (12%)
Query: 34 VARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSE 93
V N L + GD D + V ++ +G + S + +I + KR + A + E
Sbjct: 225 VGYNTLVAGFFYSGDADAAWE-VAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYE 283
Query: 94 WMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGL- 152
M G+ V + +D G R +E Y + DK+ + C + L
Sbjct: 284 GMVRSGVLPDVVTLSALVD--GLCRDGRFSEAY-ALFREMDKIGVAPNHVTYCTFIDSLA 340
Query: 153 ----VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNF 208
V+ESL L+ +M G + Y +M G+ E+ DVL + + P+
Sbjct: 341 KVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCV 400
Query: 209 SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKK 268
+Y + ++++ + E +L +ME +S +S + T+S++ N + G KA Y++K
Sbjct: 401 TYTVLVDAHCRAGNIDGAEQMLLQMEEKS-VSPNVVTFSSILNGLVKRGCIAKAAGYMRK 459
Query: 269 CEDIVSKSKDALGYNHLISHYASLGNKDEMMKFW--------------------GLQK-- 306
+D + + + Y LI + ++ + + GL+K
Sbjct: 460 MKD-SGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNG 518
Query: 307 -IKCKKQLNRD------------YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPN 353
I+ + L +D Y T++ L K G + A K+ +E D V N
Sbjct: 519 NIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYN 578
Query: 354 IILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAV 413
+ + + G +A + LKE+ G P +++ + + + N KA + + E
Sbjct: 579 VFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEM--- 635
Query: 414 HEENKFWRPKPSLVS 428
K+ KP+L++
Sbjct: 636 ----KWSSIKPNLIT 646
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 69/345 (20%), Positives = 136/345 (39%), Gaps = 48/345 (13%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ AL++ Y + + +L+++++M G + YN ++ + +G + +V MK
Sbjct: 192 WNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMK 251
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+GV P ++ I Y + + + M +S + D T S + + G
Sbjct: 252 ADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGM-VRSGVLPDVVTLSALVDGLCRDGRF 310
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
+A ++ D + + + + Y I A + +E + G + Y T
Sbjct: 311 SEAYALFREM-DKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTT 369
Query: 320 MLGSLVKIGELEEAEKML-----EEWELSCYCYDFRV----------------------- 351
++ L K G++EEA+ +L + +C Y V
Sbjct: 370 VMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKS 429
Query: 352 --PNI-----ILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
PN+ IL G ++G I KA ++++ G P ++ + G+ E A
Sbjct: 430 VSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAAL 489
Query: 405 ECMKEALAVH---EENKFWRPKPSLVSSILDWLGDNRDVEEVEAF 446
+ ++ L H E N F +V S+++ L N ++EE EA
Sbjct: 490 DVYRDML--HEGVEANNF------IVDSLVNGLRKNGNIEEAEAL 526
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 62/311 (19%), Positives = 122/311 (39%), Gaps = 18/311 (5%)
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQE 232
++YN + + G P VL +M + GVP D + + +R+ L L E
Sbjct: 118 VSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGL-SRTGLVGEAAALAE 176
Query: 233 MESQSHISMDWGTY---STVANYYIIAGLKEKAIIYLKKCEDIVSK--SKDALGYNHLIS 287
M + G + + Y + + L E + ++ S D +GYN L++
Sbjct: 177 MLVRGRGIDGLGVVGWNALIDGYCKVQDMAAA----LAVVERMTTQGLSLDVVGYNTLVA 232
Query: 288 HYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCY 347
+ G+ D + K + + T++G K+ +EEA + E S
Sbjct: 233 GFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLP 292
Query: 348 DFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECM 407
D + ++ G + G +A A+ +E+ K G P ++ A + ++ +
Sbjct: 293 DVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLL 352
Query: 408 KEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEV-EAFVSSLKIKVQKRNM-YHALTE 465
E ++ + ++++D LG +EE + +L + + Y L +
Sbjct: 353 GEMVSRGVAMDLV-----MYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVD 407
Query: 466 AHIRSGQEVDG 476
AH R+G +DG
Sbjct: 408 AHCRAGN-IDG 417
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 45/224 (20%), Positives = 93/224 (41%), Gaps = 33/224 (14%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLA--FSVHDHAVQL-- 111
+L++ G + L +RV++ + L+V E M G GL +V++ V +
Sbjct: 666 LLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLC 725
Query: 112 -------------DLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLS 158
+++G RG+ FN AL+ + + +D + +
Sbjct: 726 CHGMTRKATIVLDEMLG--RGIAPDTITFN-------------ALILGHCKSSHLDNAFA 770
Query: 159 LMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYG 218
+M G + +N ++ + G+ + V+ +MK+ G+ P+N +Y I + Y
Sbjct: 771 TYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYA 830
Query: 219 ARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
+S + EM S+ I TY+++ + + AG+ +A
Sbjct: 831 KKSNKVEALRLYCEMVSKGFIP-KASTYNSLISDFAKAGMMNQA 873
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 99/227 (43%), Gaps = 14/227 (6%)
Query: 175 YNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEME 234
YN ++ + G K VL +M G+ PD ++ I + S L + +M
Sbjct: 717 YNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQML 776
Query: 235 SQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSK------DALGYNHLISH 288
Q +S + T++T ++ GL+ I + + ++ + K + L Y+ L++
Sbjct: 777 HQG-LSPNIATFNT-----LLGGLESAGRI--GEADTVICEMKKMGLEPNNLTYDILVTG 828
Query: 289 YASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYD 348
YA NK E ++ + K Y +++ K G + +A+++ E + +
Sbjct: 829 YAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHT 888
Query: 349 FRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYA 395
+I+L G+S+ + +LK++ + G P+ + S ++ ++
Sbjct: 889 SSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSMSRAFS 935
>gi|168022838|ref|XP_001763946.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684951|gb|EDQ71350.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 727
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 134/308 (43%), Gaps = 43/308 (13%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
YG L+N Y + G + ++L ++MK G + Y+ ++ Y G V DM
Sbjct: 304 YGCLINLYTKLGKMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQLGDFANAFSVFEDMS 363
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG-- 257
E G+ PD +Y I + ++ +++ +L M+++ S TY T+ + ++ G
Sbjct: 364 EAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRG-CSPTIQTYITIIDGFMKTGDV 422
Query: 258 -LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEM------MKFWGLQK---- 306
+ K + +K + +A YN ++ + LG D M+ G+Q
Sbjct: 423 RMAYKTVSEMK----LAGCRPNATTYNVIMHNLVQLGQIDRAASVIDEMELAGVQPNFRS 478
Query: 307 -----------------IKCKKQLNR--------DYITMLGSLVKIGELEEAEKMLEEWE 341
KC K++N Y ++L + K G ++ A + EE
Sbjct: 479 YTTLMQGFASIGEIGLAFKCLKRVNEITQKPPIISYASLLKACCKAGRMQNAIAVTEEMA 538
Query: 342 LSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNME 401
+ + + N +L G++Q+G + +A +++++ ++G TP +S++ +M+
Sbjct: 539 FAGVPMNNYIFNTLLDGWAQRGDMWEAYGIMQKMRQEGFTPDIHSYTSFVNACCKAGDMQ 598
Query: 402 KAFECMKE 409
KA E ++E
Sbjct: 599 KATETIEE 606
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/355 (19%), Positives = 148/355 (41%), Gaps = 21/355 (5%)
Query: 128 NSLNDEDK-VDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTG 186
N+ DK V++ Y L++ Y + G + +KM+ G S YN ++ Y
Sbjct: 113 NAFKRIDKAVERDYALLIHYYGKRGDKRGARVTFEKMRAAGIDSSVHAYNNLIRAYIMAQ 172
Query: 187 QHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDW--- 243
+ + +M+ G+ P+ ++ I+ YG+ + + E Q +S +W
Sbjct: 173 NLQGAVSCVEEMEIEGIFPNAATFSAIISGYGSSGNVEAAEKWFQR-----SVSENWNHN 227
Query: 244 -GTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFW 302
YS++ + Y AG E+A + E+ ++ L YN L+ YA + + + +
Sbjct: 228 VAIYSSIIHAYCKAGNMERAEALVADMEEQGLEATLGL-YNILMDGYARCHIEAQCLNVF 286
Query: 303 GLQKIKCKKQLNRDYIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGY 359
K + L+ +T ++ K+G++ +A + +E + + ++++ GY
Sbjct: 287 HKLKARIDTGLSPTAVTYGCLINLYTKLGKMMKALEFCKEMKAQGITLNRNTYSMLVDGY 346
Query: 360 SQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKF 419
Q G A +V +++ + G P +++I+ + M +A + + + +
Sbjct: 347 VQLGDFANAFSVFEDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRM-----KTRG 401
Query: 420 WRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRN--MYHALTEAHIRSGQ 472
P +I+D DV VS +K+ + N Y+ + ++ GQ
Sbjct: 402 CSPTIQTYITIIDGFMKTGDVRMAYKTVSEMKLAGCRPNATTYNVIMHNLVQLGQ 456
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/309 (20%), Positives = 130/309 (42%), Gaps = 7/309 (2%)
Query: 106 DHAVQLDLIGKVRGLESAETYFNSLNDE--DKVDKLYGALLNCYVREGLVDESLSLMQKM 163
D+A+ + GK A F + D Y L+ Y+ + ++S +++M
Sbjct: 125 DYALLIHYYGKRGDKRGARVTFEKMRAAGIDSSVHAYNNLIRAYIMAQNLQGAVSCVEEM 184
Query: 164 KEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSEL 223
+ G F +A ++ I+ Y ++G E + Y I++Y +
Sbjct: 185 EIEGIFPNAATFSAIISGYGSSGNVEAAEKWFQRSVSENWNHNVAIYSSIIHAYCKAGNM 244
Query: 224 SSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK--SKDALG 281
E ++ +ME Q + G Y+ + + Y ++ + + K + + S A+
Sbjct: 245 ERAEALVADMEEQG-LEATLGLYNILMDGYARCHIEAQCLNVFHKLKARIDTGLSPTAVT 303
Query: 282 YNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITML-GSLVKIGELEEAEKMLEEW 340
Y LI+ Y LG + ++F K + LNR+ +ML V++G+ A + E+
Sbjct: 304 YGCLINLYTKLGKMMKALEFCKEMKAQ-GITLNRNTYSMLVDGYVQLGDFANAFSVFEDM 362
Query: 341 ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNM 400
+ D+ NI+L + + + +A +L + +G +PT ++ I G+ ++
Sbjct: 363 SEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRGCSPTIQTYITIIDGFMKTGDV 422
Query: 401 EKAFECMKE 409
A++ + E
Sbjct: 423 RMAYKTVSE 431
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 63/317 (19%), Positives = 131/317 (41%), Gaps = 17/317 (5%)
Query: 85 FKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE--DKVDKLYGA 142
F +A V E MS G+ + + L K R + A + + Y
Sbjct: 352 FANAFSVFEDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRGCSPTIQTYIT 411
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
+++ +++ G V + + +MK G +A YN IM GQ ++ V+ +M+ G
Sbjct: 412 IIDGFMKTGDVRMAYKTVSEMKLAGCRPNATTYNVIMHNLVQLGQIDRAASVIDEMELAG 471
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQ---EMESQSHISMDWGTYSTVANYYIIAGLK 259
V P+ SY + + + E+ L+ E+ + I +Y+++ AG
Sbjct: 472 VQPNFRSYTTLMQGFASIGEIGLAFKCLKRVNEITQKPPII----SYASLLKACCKAGRM 527
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD--- 316
+ AI ++ + +N L+ +A G +M + +G+ + ++ D
Sbjct: 528 QNAIAVTEEMA-FAGVPMNNYIFNTLLDGWAQRG---DMWEAYGIMQKMRQEGFTPDIHS 583
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y + + + K G++++A + +EE + + + I++ G++ EKA E+
Sbjct: 584 YTSFVNACCKAGDMQKATETIEEMKQQDLQPNLQTYTILIHGWTSVSHPEKALICYDEMK 643
Query: 377 KKGKTP-TPNSWSIIAA 392
G P P + I+ +
Sbjct: 644 AAGLIPDKPLYYCIVTS 660
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 148/364 (40%), Gaps = 17/364 (4%)
Query: 63 EGQKISE--LELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGL 120
EG + S + VI + A + M +G+ V + +D + K R +
Sbjct: 256 EGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAM 315
Query: 121 ESAETYFNSLNDED-KVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGI 178
+ AE + D+ + D L Y A+++ Y G ES + +KM G + +N
Sbjct: 316 DKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSF 375
Query: 179 MCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSH 238
M G+ + ++ M G PD SY I ++ Y + M N+ M +
Sbjct: 376 MSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKG- 434
Query: 239 ISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGN-KDE 297
I + ++ + + + G+ ++A++ + + + D + Y+ LIS + +G D
Sbjct: 435 IVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVR-PDVVTYSTLISAFCRMGRLADA 493
Query: 298 MMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL 357
M KF + I + Y +++ G+L +A++++ E PNI+
Sbjct: 494 MEKFSQMISIGLEPN-TVVYHSLIHGFCMHGDLVKAKELVSEM----MSKGIPRPNIVFF 548
Query: 358 -----GYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
+G + A V ++ G PT +++ + GY MEKAF + ++
Sbjct: 549 SSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVS 608
Query: 413 VHEE 416
V E
Sbjct: 609 VGIE 612
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 78/379 (20%), Positives = 147/379 (38%), Gaps = 55/379 (14%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD-M 198
YG L++C R D + ++ G + N + + + ++ DVLL M
Sbjct: 159 YGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLLHRM 218
Query: 199 KENGVPPDNFSYRICINSY-------------------GAR------------------S 221
+ G P+ SY I S G R
Sbjct: 219 SDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQG 278
Query: 222 ELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALG 281
E+S N++ EM Q + D TY+++ + A +KA + L++ D D L
Sbjct: 279 EVSKACNLINEM-VQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVD-KGVEPDGLT 336
Query: 282 YNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR--DYITMLGSLVKIGELEEAEKMLEE 339
Y +I Y+ G+ E K + +K+ K + + + + SL K G ++AE++ +
Sbjct: 337 YTAIIHGYSCSGHWKESAKMF--RKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQY 394
Query: 340 WELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNN 399
+ D +I+L GY+ +G + + + KG + ++I+ + +A +
Sbjct: 395 MTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGM 454
Query: 400 MEKAFECMKEALAVHEENKFWRPKPSLVSS---ILDWLGDNRDVEEVEAFVSSLKIKVQK 456
M+ EA+ V E + +P +V+ I + R + +E F + I ++
Sbjct: 455 MD-------EAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEP 507
Query: 457 RN-MYHALTEAHIRSGQEV 474
+YH+L G V
Sbjct: 508 NTVVYHSLIHGFCMHGDLV 526
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 81/396 (20%), Positives = 158/396 (39%), Gaps = 83/396 (20%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ +++ + ++G V ++ +L+ +M + G + YN I+ +K VL M
Sbjct: 267 FNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMV 326
Query: 200 ENGVPPDNFSYRICINSYGA--------------------------RSELSSM------- 226
+ GV PD +Y I+ Y S +SS+
Sbjct: 327 DKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSK 386
Query: 227 --ENVLQEMESQSHISMDWGTYSTVANYYIIAG-----------LKEKAIIYLKKCEDIV 273
E + Q M ++ H+ D +YS + + Y G + +K I+ C
Sbjct: 387 DAEEIFQYMTTKGHMP-DLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHC---- 441
Query: 274 SKSKDALGYNHLISHYASLGNKDE-MMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEE 332
+N LIS +A G DE M+ F +Q + + Y T++ + ++G L +
Sbjct: 442 --------FNILISAHAKRGMMDEAMLVFTEMQGQGVRPDV-VTYSTLISAFCRMGRLAD 492
Query: 333 A-EKMLEEWELSCYCYDFRVPNIILL-----GYSQKGMIEKADAVLKEIVKKGKTPTPN- 385
A EK + + PN ++ G+ G + KA ++ E++ KG P PN
Sbjct: 493 AMEKFSQMISIGLE------PNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKG-IPRPNI 545
Query: 386 -SWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVE 444
+S I ++ + A + L +H + RP +S++D +E+
Sbjct: 546 VFFSSIIHSLCNEGRVMDAHDVFN--LVIHIGD---RPTIVTFNSLIDGYCLVGKMEKAF 600
Query: 445 AFVSSL-KIKVQKRNM-YHALTEAHIRSGQEVDGLL 478
+ ++ + ++ + Y+ L + +SG+ DGL+
Sbjct: 601 GVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLI 636
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 61/329 (18%), Positives = 124/329 (37%), Gaps = 38/329 (11%)
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YG 141
R K A ++ ++M+ +G + +++ L F+S+ D+ V +
Sbjct: 384 RSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFN 443
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
L++ + + G++DE++ + +M+ G + Y+ ++ + G+ + M
Sbjct: 444 ILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISI 503
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQS-------------HISMDWG---- 244
G+ P+ Y I+ + +L + ++ EM S+ H + G
Sbjct: 504 GLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMD 563
Query: 245 ------------------TYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLI 286
T++++ + Y + G EKA L V D + YN L+
Sbjct: 564 AHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVS-VGIEPDVVTYNTLV 622
Query: 287 SHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYC 346
S Y G D+ + + K K Y +L L G A+KM E S
Sbjct: 623 SGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTA 682
Query: 347 YDFRVPNIILLGYSQKGMIEKADAVLKEI 375
D I+L G + + ++A + ++
Sbjct: 683 VDIDTYKILLKGLCRNDLTDEAITLFHKL 711
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 99/239 (41%), Gaps = 8/239 (3%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL--- 196
+ +L++ Y G ++++ ++ M +G + YN ++ Y +G KI D L+
Sbjct: 583 FNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSG---KIDDGLILFR 639
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
+M V P +Y I ++ S+ + + EM S ++D TY +
Sbjct: 640 EMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEM-IDSGTAVDIDTYKILLKGLCRN 698
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
L ++AI K + K D N +I+ + ++E +
Sbjct: 699 DLTDEAITLFHKLGAMDCKF-DITILNTVINALYKVRRREEANDLFAAISTSGLVPNVST 757
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
Y M+ +L+K G +EEA+ M E S R+ N I+ QKG I KA + ++
Sbjct: 758 YGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKV 816
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 106/266 (39%), Gaps = 4/266 (1%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+ ++++ EG V ++ + + +G + + +N ++ Y G+ EK VL M
Sbjct: 547 FFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAM 606
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
G+ PD +Y ++ Y ++ + +EM + + TYS V + AG
Sbjct: 607 VSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKK-VKPTTVTYSIVLDGLFHAGR 665
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMK-FWGLQKIKCKKQLNRDY 317
A + D + D Y L+ DE + F L + CK +
Sbjct: 666 TSAAKKMFHEMID-SGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITI-L 723
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
T++ +L K+ EEA + S + +++ ++G +E+AD + + K
Sbjct: 724 NTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEK 783
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKA 403
G P+ + I K ++ KA
Sbjct: 784 SGCAPSSRLLNDIIRMLLQKGDIVKA 809
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 88/417 (21%), Positives = 179/417 (42%), Gaps = 32/417 (7%)
Query: 81 SRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVD-KL 139
S +RF A ++ E + +G SV L +GK R ++ A T F+ + + K +
Sbjct: 328 SAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDAKPNIST 387
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +++ G V+E+ + +M+ G F + L+ N ++ Q E+ +
Sbjct: 388 YNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESAS 447
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E G P++ +Y I+ G + ++ + ++M H + S + N+++ +
Sbjct: 448 ERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKE 507
Query: 260 EKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNK-------DEMMKFWGLQKIKCK 310
+ IY ++++ + D N + G ++M F L +
Sbjct: 508 DGHKIY----KEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDV--- 560
Query: 311 KQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADA 370
R Y ++ L K G+ E + + + D R N ++ G + G ++KA
Sbjct: 561 ----RSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYE 616
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSI 430
VL+E+ K PT ++ I G A + +++A+ +EA ++K L SS+
Sbjct: 617 VLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEA-----KSKGIELNVILYSSL 671
Query: 431 LDWLGDNRDVEEVEAFVSSLKIKVQKRNMY--HALTEAHIRSGQEVDGLL---ESMK 482
+D G ++E + + K N+Y ++L +A +++ +E+D L +SMK
Sbjct: 672 IDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKT-EEIDEALICFQSMK 727
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 150/340 (44%), Gaps = 12/340 (3%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE- 133
+I L R A ++ + M GL ++ + +D + K LE A F S ++
Sbjct: 391 IIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERG 450
Query: 134 -DKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+ Y +L++ ++G +D++ L +KM + G + + Y ++ + G+ E
Sbjct: 451 CNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGH 510
Query: 193 DVLLDMKENGVPPDNF---SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTV 249
+ +M G PD +Y C+ G E+ + ++M+S + D +YS +
Sbjct: 511 KIYKEMIRRGGRPDLTLLNTYMDCVFKAG---EVEKGRAIFEDMKSFGFLP-DVRSYSIL 566
Query: 250 ANYYIIAG-LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIK 308
+ AG +E + I+ + + DA YN ++ G D+ + K+K
Sbjct: 567 IHGLTKAGQARETSNIFQAMSQQ--GFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVK 624
Query: 309 CKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKA 368
Y +++ L KI L+EA + EE + + + + ++ G+ + G I++A
Sbjct: 625 HVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEA 684
Query: 369 DAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMK 408
+L+E++KKG TP +W+ + +++A C +
Sbjct: 685 YLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQ 724
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 53/321 (16%), Positives = 132/321 (41%), Gaps = 5/321 (1%)
Query: 64 GQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESA 123
G ++S ++R L + + AL + + + G L + + V +D GK ++ A
Sbjct: 206 GYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMA 265
Query: 124 ETYFNSLNDED--KVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCL 181
+F+ L D Y +++ + G + E+ L +M+ A YN ++
Sbjct: 266 WKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMG 325
Query: 182 YTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISM 241
Y + + + +L ++E G P S+ + G + ++ + M+ + ++
Sbjct: 326 YGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDAKPNI 385
Query: 242 DWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKF 301
TY+ + + +AG +A + E + + L N ++ +E +
Sbjct: 386 S--TYNIIIDMLCMAGRVNEAYKIRDEME-LAGLFPNLLSVNIMVDRLCKANQLEEAHRI 442
Query: 302 WGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQ 361
+ + + Y +++ L K G++++A ++ E+ + + + + ++ +
Sbjct: 443 FESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFM 502
Query: 362 KGMIEKADAVLKEIVKKGKTP 382
G E + KE++++G P
Sbjct: 503 HGRKEDGHKIYKEMIRRGGRP 523
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 47/280 (16%), Positives = 106/280 (37%), Gaps = 39/280 (13%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
LY ++C+ + G VD + ++K G ++Y ++ + G+ + ++ M
Sbjct: 248 LYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQM 307
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
+ P ++Y I YG+ +L+ L
Sbjct: 308 EAERDVPCAYAYNTMIMGYGSAERFDDAYKLLER-------------------------L 342
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
+E+ I + +N +++ DE + + + K K ++ Y
Sbjct: 343 RERGCI------------PSVVSFNSILTCLGKKRKVDEALTLFDVMKKDAKPNIS-TYN 389
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
++ L G + EA K+ +E EL+ + NI++ + +E+A + + ++
Sbjct: 390 IIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASER 449
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL-AVHEEN 417
G P ++ + G K ++ A+ ++ L A H+ N
Sbjct: 450 GCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDAN 489
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 84/187 (44%), Gaps = 10/187 (5%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYF---NSLN 131
V+ L + A +V E M + + +V + +D + K+ L+ A F S
Sbjct: 601 VVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKG 660
Query: 132 DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
E V LY +L++ + + G +DE+ ++++M + G + +N +M T + ++
Sbjct: 661 IELNV-ILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEA 719
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
MKE P+ ++Y I IN + + QEM+ Q I + TY+T
Sbjct: 720 LICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIP-NVVTYTT--- 775
Query: 252 YYIIAGL 258
+I+GL
Sbjct: 776 --MISGL 780
>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 606
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 131/283 (46%), Gaps = 24/283 (8%)
Query: 127 FNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTN 184
F + D+D + + Y +L+N G ++E++ + KM G + + Y+ ++ +
Sbjct: 319 FKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCK 378
Query: 185 TGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWG 244
G ++ D+ +K G P Y + I++Y ++ + +EME + I D G
Sbjct: 379 NGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREG-IVPDVG 437
Query: 245 TYSTVANYYIIAGL-KEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLG-NKDEMMK 300
TY+ +IAGL + I KK D ++ D + ++ L+ Y S G ++ M
Sbjct: 438 TYNC-----LIAGLCRNGNIEAAKKLFDQLTNKGLPDLVTFHILMEGYCSRGESRKAAML 492
Query: 301 FWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWE------LSCYCYDFRVPNI 354
+ K+ K + + Y M+ K G L+ A M + E ++ Y N+
Sbjct: 493 LKEMSKMGLKPR-HLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASY-----NV 546
Query: 355 ILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADK 397
+L GYSQKG +E A+ +L E+++KG P ++ I+ DK
Sbjct: 547 LLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDK 589
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 123/275 (44%), Gaps = 10/275 (3%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM---CLYTNTGQHEKIPDVLL 196
+ ++N + G ++++ +M+ MK G + ++YN ++ C G+ K VL
Sbjct: 226 FNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLK 285
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
+M EN V P+ ++ I I+ + L V +EM Q I + TY+++ N
Sbjct: 286 EMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIP-NVITYNSLINGLCNG 344
Query: 257 GLKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN 314
G +AI K +VS + + Y+ LI+ + G E + + K + +
Sbjct: 345 GKINEAIGMRDK---MVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTT 401
Query: 315 RDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
R Y ++ + K+G++++ + EE E D N ++ G + G IE A + +
Sbjct: 402 RMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQ 461
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
+ KG P ++ I+ GY + KA +KE
Sbjct: 462 LTNKG-LPDLVTFHILMEGYCSRGESRKAAMLLKE 495
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 84/172 (48%), Gaps = 12/172 (6%)
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQ---KGMIEKADAVLKEI 375
++ +L K G++ +A ++E+ ++ Y + N ++ GY + G + KADAVLKE+
Sbjct: 228 VVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEM 287
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLG 435
V+ +P +++I+ G+ +N+ + + KE L ++ P +S+++ L
Sbjct: 288 VENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEML-----DQDVIPNVITYNSLINGLC 342
Query: 436 DNRDVEEVEAFVSSLKIKVQKRNM--YHALTEAHIRSG--QEVDGLLESMKA 483
+ + E + + N+ YH+L ++G +E + +S+K
Sbjct: 343 NGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKG 394
>gi|15218855|ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g03560, mitochondrial; Flags: Precursor
gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana]
gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 142/320 (44%), Gaps = 23/320 (7%)
Query: 176 NGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMES 235
N ++ + G E++ V MKENG+ P ++Y +N + + S E V + MES
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 250
Query: 236 QSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNK 295
I D TY+T+ Y AG +KA ++K D+ ++ +A ++ A +
Sbjct: 251 -GRIKPDIVTYNTMIKGYCKAGQTQKA---MEKLRDMETRGHEADKITYMTMIQACYADS 306
Query: 296 D--EMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPN 353
D + + K + + ++G L K G+L E + E + +
Sbjct: 307 DFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYT 366
Query: 354 IILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE----CMKE 409
+++ GY++ G +E A +L ++ +G P ++S++ G +E+A + C +
Sbjct: 367 VLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFD 426
Query: 410 ALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRN--MYHALTEAH 467
LA++ + F+ SS++D LG V+E E + K R+ Y+AL +A
Sbjct: 427 GLAIN--SMFY-------SSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAF 477
Query: 468 I--RSGQEVDGLLESMKADD 485
R E L + M+ ++
Sbjct: 478 TKHRKVDEAIALFKRMEEEE 497
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 127/306 (41%), Gaps = 46/306 (15%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+N V VD + + + M+ + YN ++ Y GQ +K + L DM+
Sbjct: 225 YNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDME 284
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS------HISMDWG--------- 244
G D +Y I + A S+ S + QEM+ + S+ G
Sbjct: 285 TRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLN 344
Query: 245 -------------------TYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHL 285
Y+ + + Y +G E AI L + D K D + Y+ +
Sbjct: 345 EGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKP-DVVTYSVV 403
Query: 286 ISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEW-ELSC 344
++ G +E + ++ + + Y +++ L K G ++EAE++ EE E C
Sbjct: 404 VNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGC 463
Query: 345 ----YCYDFRVPNIILLGYSQKGMIEKADAVLKEI-VKKGKTPTPNSWSIIAAGYADKNN 399
YCY N ++ +++ +++A A+ K + ++G T +++I+ +G ++
Sbjct: 464 TRDSYCY-----NALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHR 518
Query: 400 MEKAFE 405
E+A +
Sbjct: 519 NEEALK 524
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 88/191 (46%), Gaps = 19/191 (9%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
+L + + EG K + V+ L R + AL GLA + ++ +D +G
Sbjct: 384 LLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLG 443
Query: 116 KVRGLESAETYFNSLNDE--DKVDKLYGALLNCYVREGLVDESLSLMQKM-KEMGSFGSA 172
K ++ AE F ++++ + Y AL++ + + VDE+++L ++M +E G +
Sbjct: 444 KAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTV 503
Query: 173 LNYNGIMCLYTNTGQHE---KIPDVLLDMKENGVPPDNFSYR-----ICINSYGARS--- 221
Y ++ ++E K+ D+++D G+ P +R +C++ AR+
Sbjct: 504 YTYTILLSGMFKEHRNEEALKLWDMMID---KGITPTAACFRALSTGLCLSGKVARACKI 560
Query: 222 --ELSSMENVL 230
EL+ M +L
Sbjct: 561 LDELAPMGVIL 571
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 156/362 (43%), Gaps = 19/362 (5%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
+L++ L G VI L R A ++ M +G A + ++ +
Sbjct: 274 LLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLC 333
Query: 116 KVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKM-KEMGSFGSALN 174
K+ +++A+ F + + V ++ L++ +V G +D++ +++ M G
Sbjct: 334 KIGRVDAAKDLFYRIPKPEIV--IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCT 391
Query: 175 YNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEME 234
YN ++ Y G +VL DM+ G P+ +SY I ++ + ++ NVL EM
Sbjct: 392 YNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS 451
Query: 235 SQSHISMDWGTYSTVANYYIIAGLKEKAIIYL----KKCEDIVSKSKDALGYNHLISHYA 290
+ G ++ + + E I+ K C+ D +N LIS
Sbjct: 452 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCK------PDVYTFNSLIS--- 502
Query: 291 SLGNKDEM-MKFWGLQKIKCKKQL--NRDYITMLGSLVKIGELEEAEKMLEEWELSCYCY 347
L DE+ W L+ + + + Y T++ + ++ GE++EA K++ E
Sbjct: 503 GLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPL 562
Query: 348 DFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECM 407
D N ++ G + G ++KA ++ +++++ G P+ S +I+ G +E+A E
Sbjct: 563 DEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQ 622
Query: 408 KE 409
KE
Sbjct: 623 KE 624
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 139/309 (44%), Gaps = 35/309 (11%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +L+ Y +EGLV +L ++ M+ G + +Y ++ + G+ ++ +VL +M
Sbjct: 392 YNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS 451
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+G+ P+ + I+++ + + +EM + D T+++ +I+GL
Sbjct: 452 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG-CKPDVYTFNS-----LISGLC 505
Query: 260 E----KAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQL 313
E K ++L + D++S+ + + YN LI+ + G E K +
Sbjct: 506 EVDEIKHALWLLR--DMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLD 563
Query: 314 NRDYITMLGSLVKIGELEEA----EKMLEEWE----LSCYCYDFRVPNIILLGYSQKGMI 365
Y +++ L + GE+++A EKML + +SC NI++ G + GM+
Sbjct: 564 EITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISC--------NILINGLCRSGMV 615
Query: 366 EKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPS 425
E+A KE+V +G TP +++ + G +E ++ A + P
Sbjct: 616 EEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQA-----EGIPPDTV 670
Query: 426 LVSSILDWL 434
++++ WL
Sbjct: 671 TFNTLMSWL 679
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/334 (19%), Positives = 143/334 (42%), Gaps = 25/334 (7%)
Query: 88 ALQVSEWMSGQ-GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDK--LYGALL 144
++++ W Q G S + V + +G ++ + + DE V K L+ +++
Sbjct: 94 SMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIM 153
Query: 145 NCYVREGLVDESLSLMQKMKEMGSFGSAL-NYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
Y + G ++ LM +M+ + S +YN ++ + + H+ +V DM +
Sbjct: 154 RDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKI 213
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAI 263
PP F++ + + ++ A +E+ S ++L++M + + Y T+ + +A+
Sbjct: 214 PPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVP-NSVIYQTLIHSLSKCNRVNEAL 272
Query: 264 IYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGS 323
L++ ++ DA +N +I +E K I+ + Y ++
Sbjct: 273 QLLEE-MFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNG 331
Query: 324 LVKIGELEEAEKMLEEWELSCYCYDFRVP-------NIILLGYSQKGMIEKADAVLKEIV 376
L KIG ++ A+ + +R+P N ++ G+ G ++ A AVL ++V
Sbjct: 332 LCKIGRVDAAKDLF-----------YRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMV 380
Query: 377 KK-GKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
G P +++ + GY + + A E + +
Sbjct: 381 TSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHD 414
>gi|242078641|ref|XP_002444089.1| hypothetical protein SORBIDRAFT_07g007540 [Sorghum bicolor]
gi|241940439|gb|EES13584.1| hypothetical protein SORBIDRAFT_07g007540 [Sorghum bicolor]
Length = 942
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 131/305 (42%), Gaps = 12/305 (3%)
Query: 111 LDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKM-KEMG 167
+D+ ++ AE + L V + Y ++ Y++ ++++ S++ +M K+
Sbjct: 596 IDVFSMMKRFADAEAIYLELKASASVLDMIAYSVIVRMYIKAQRLEDACSILAEMEKQKE 655
Query: 168 SFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSME 227
+ ++ Y G EK+ D ++++ V D Y IN G + +
Sbjct: 656 IIPDKYLFLDMLRTYQKCGLLEKLADTYYWIRKSQVECDEAMYNCIINCCGRAIPVDELS 715
Query: 228 NVLQEMESQSHISMDWGTYSTVANYYIIAGL---KEKAIIYLKKCEDIVSKSKDALGYNH 284
+ EM Q H++ + T + + + Y AGL EK I +K D + YN
Sbjct: 716 RIFDEMIQQGHLA-NTVTLNVLLDIYGKAGLFNRAEKVFIMARK-----QGLADIISYNT 769
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSC 344
+I+ YA GN M F + + Y ML + K G+LEE +L++ + +
Sbjct: 770 IIAAYAKSGNFHSMNYFVQMMQDAGFPVSPEAYNCMLDAYGKAGQLEEFASVLQKMKRAK 829
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
+D NI++ Y ++G IE VL E+ +G P S++ + Y E A
Sbjct: 830 CKFDHYTYNIMINIYGRRGWIEDVSNVLAELKDRGVVPDLYSYNTLIKAYGIARMPEDAV 889
Query: 405 ECMKE 409
+ M+E
Sbjct: 890 KLMQE 894
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 88/203 (43%), Gaps = 4/203 (1%)
Query: 49 PDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHA 108
P L+ + D+ + +G + + L ++ F A +V QGLA + +
Sbjct: 710 PVDELSRIFDEMIQQGHLANTVTLNVLLDIYGKAGLFNRAEKVFIMARKQGLA-DIISYN 768
Query: 109 VQLDLIGKVRGLESAETYFNSLNDED--KVDKLYGALLNCYVREGLVDESLSLMQKMKEM 166
+ K S + + D + Y +L+ Y + G ++E S++QKMK
Sbjct: 769 TIIAAYAKSGNFHSMNYFVQMMQDAGFPVSPEAYNCMLDAYGKAGQLEEFASVLQKMKRA 828
Query: 167 GSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSM 226
YN ++ +Y G E + +VL ++K+ GV PD +SY I +YG
Sbjct: 829 KCKFDHYTYNIMINIYGRRGWIEDVSNVLAELKDRGVVPDLYSYNTLIKAYGIARMPEDA 888
Query: 227 ENVLQEMESQSHISMDWGTYSTV 249
++QEM + IS D TY+ +
Sbjct: 889 VKLMQEMRIKG-ISPDRVTYANL 910
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 116/299 (38%), Gaps = 41/299 (13%)
Query: 113 LIGKVRGLESAETYFNSL-NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGS 171
L K L AE F + N K Y A++ Y R GL +S + M G +
Sbjct: 285 LYQKTGKLSEAEFTFQKMRNCNIKCVNAYSAMITLYTRLGLFAKSEDTINLMNNDGLVPN 344
Query: 172 ALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQ 231
N+ + +Y G+ E+ VL M + G + +Y I YG S++ V
Sbjct: 345 MENWLVRLNVYCQQGKMEEAELVLQSMVDEGFTLNIVAYNTLITGYGKSSDVQKANRVFD 404
Query: 232 EMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYAS 291
+ S + ++ D TY ++ + A + E+AI+Y +K + G+ S
Sbjct: 405 SLGS-AGLAPDETTYRSMVEGFGRANIYEEAILYYRKLK--------GAGFRPNAS---- 451
Query: 292 LGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELS-CYCYDFR 350
++ TM+ L + + E A +++E+ + C C
Sbjct: 452 ------------------------NFYTMINLLARRDDNETAAEIMEDMRAAGCQCSS-- 485
Query: 351 VPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
+ +++ Y G + K +L+ K S SI+ + K+ +E+A ++E
Sbjct: 486 IVTVLVRAYGAVGRMHKVLPILQACFNKKILFDATSCSILVTSFVQKSLLEEALYILRE 544
>gi|110738150|dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
Length = 642
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 135/302 (44%), Gaps = 21/302 (6%)
Query: 176 NGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMES 235
N ++ + G E++ V MKENG+ P ++Y +N + + S E V + MES
Sbjct: 173 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 232
Query: 236 QSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNK 295
I D TY+T+ Y AG +KA ++K D+ ++ +A ++ A +
Sbjct: 233 -GRIKPDIVTYNTMIKGYCKAGQTQKA---MEKLRDMETRGHEADKITYMTMIQACYADS 288
Query: 296 D--EMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPN 353
D + + K + + ++G L K G+L E + E + +
Sbjct: 289 DFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYT 348
Query: 354 IILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE----CMKE 409
+++ GY++ G +E A +L ++ +G P ++S++ G +E+A + C +
Sbjct: 349 VLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFD 408
Query: 410 ALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRN--MYHALTEAH 467
LA++ + F+ SS++D LG V+E E + K R+ Y+AL +A
Sbjct: 409 GLAIN--SMFY-------SSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAF 459
Query: 468 IR 469
+
Sbjct: 460 TK 461
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 127/306 (41%), Gaps = 46/306 (15%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+N V VD + + + M+ + YN ++ Y GQ +K + L DM+
Sbjct: 207 YNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDME 266
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS------HISMDWG--------- 244
G D +Y I + A S+ S + QEM+ + S+ G
Sbjct: 267 TRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLN 326
Query: 245 -------------------TYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHL 285
Y+ + + Y +G E AI L + D K D + Y+ +
Sbjct: 327 EGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKP-DVVTYSVV 385
Query: 286 ISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEW-ELSC 344
++ G +E + ++ + + Y +++ L K G ++EAE++ EE E C
Sbjct: 386 VNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGC 445
Query: 345 ----YCYDFRVPNIILLGYSQKGMIEKADAVLKEI-VKKGKTPTPNSWSIIAAGYADKNN 399
YCY N ++ +++ +++A A+ K + ++G T +++I+ +G ++
Sbjct: 446 TRDSYCY-----NALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHR 500
Query: 400 MEKAFE 405
E+A +
Sbjct: 501 NEEALK 506
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 85/188 (45%), Gaps = 13/188 (6%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
+L + + EG K + V+ L R + AL GLA + ++ +D +G
Sbjct: 366 LLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLG 425
Query: 116 KVRGLESAETYFNSLNDE--DKVDKLYGALLNCYVREGLVDESLSLMQKM-KEMGSFGSA 172
K ++ AE F ++++ + Y AL++ + + VDE+++L ++M +E G +
Sbjct: 426 KAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTV 485
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYR-----ICINSYGARS-----E 222
Y ++ ++E+ + M + G+ P +R +C++ AR+ E
Sbjct: 486 YTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDE 545
Query: 223 LSSMENVL 230
L+ M +L
Sbjct: 546 LAPMGVIL 553
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 155/343 (45%), Gaps = 18/343 (5%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE- 133
+I L + AL+V + M GL ++ + +D + K + L+ A + F L+ +
Sbjct: 417 LIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKV 476
Query: 134 ---DKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEK 190
D V + +L++ R G V+++ L +KM + G +A+ Y ++ + G+ E
Sbjct: 477 CTPDSVT--FCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKED 534
Query: 191 IPDVLLDMKENGVPPDNF---SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYS 247
+ +M G PD +Y C+ G E+ + +E+++Q ++ D +YS
Sbjct: 535 GHKIYKEMMHRGCSPDLMLLNNYMDCVFKAG---EIEKGRALFEEIKAQG-LTPDVRSYS 590
Query: 248 TVANYYIIAGLKEKA--IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQ 305
+ + + G + + Y K + + D YN +I + G ++ +
Sbjct: 591 ILIHGLVKGGFSKDTYKLFYEMKEQGL---HLDTRAYNIVIDGFCKSGKVNKAYQLLEEM 647
Query: 306 KIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMI 365
K K + Y +++ L KI L+EA + EE + + V + ++ G+ + G I
Sbjct: 648 KTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRI 707
Query: 366 EKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMK 408
++A +L+E+++KG TP +W+ + +++A C +
Sbjct: 708 DEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQ 750
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 145/326 (44%), Gaps = 12/326 (3%)
Query: 154 DESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRIC 213
D L+L+++M+E+G + + ++C++ G+ + +L +MK N D Y +C
Sbjct: 219 DPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVC 278
Query: 214 INSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIV 273
I+ +G ++ E++SQ + D T++++ A ++A+ ++ +
Sbjct: 279 IDCFGKVGKVDMAWKFFHELKSQGLVPDDV-TFTSMIGVLCKAERVDEAVELFEELDS-- 335
Query: 274 SKSKDAL-GYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEE 332
+KS + YN +I Y S+G +E QK K Y +L L + G++EE
Sbjct: 336 NKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEE 395
Query: 333 AEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAA 392
A ++LE ++ + NI++ + G +E A V + + G P + +I+
Sbjct: 396 ALRILEAMKMDA-APNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMID 454
Query: 393 GYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKI 452
+++A C ++ + ++K P S++D LG + V + +
Sbjct: 455 RLCKAQRLDEA--C---SIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLD 509
Query: 453 KVQKRN--MYHALTEAHIRSGQEVDG 476
Q N +Y +L + G++ DG
Sbjct: 510 SGQTPNAVVYTSLIRNFFKCGRKEDG 535
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 80/373 (21%), Positives = 158/373 (42%), Gaps = 46/373 (12%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +L C R+G V+E+L +++ MK M + + +YN ++ + G+ E V MK
Sbjct: 380 YNCILTCLGRKGKVEEALRILEAMK-MDAAPNLTSYNILIDMLCKAGELEAALKVQDSMK 438
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E G+ P+ + I I+ L ++ ++ + + D T+ ++ + G
Sbjct: 439 EAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKV-CTPDSVTFCSLIDGLGRHGKV 497
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWG-LQKIKCKKQLN---- 314
A + +K D ++ +A+ Y LI ++ G K++ K + + C L
Sbjct: 498 NDAYMLYEKMLD-SGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNN 556
Query: 315 ------------------------------RDYITMLGSLVKIGELEEAEKMLEEWELSC 344
R Y ++ LVK G ++ K+ E +
Sbjct: 557 YMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQG 616
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
D R NI++ G+ + G + KA +L+E+ KG PT ++ + G A + +++A+
Sbjct: 617 LHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAY 676
Query: 405 ECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNMY--HA 462
+EA ++K + SS++D G ++E + L K N Y +
Sbjct: 677 MLFEEA-----KSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNC 731
Query: 463 LTEAHIRSGQEVD 475
L +A +++ +E+D
Sbjct: 732 LLDALVKA-EEID 743
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 121/273 (44%), Gaps = 28/273 (10%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE- 133
VI + A Q+ E M +GL +V + +D + K+ L+ A F +
Sbjct: 627 VIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKA 686
Query: 134 -DKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
D +Y +L++ + + G +DE+ +++++ + G + +N CL + E+I
Sbjct: 687 VDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWN---CLLDALVKAEEID 743
Query: 193 DVLL---DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTV 249
+ L+ +MK PP+ +Y I +N + + QEM+ Q + + TY+T
Sbjct: 744 EALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQG-LKPNTITYTT- 801
Query: 250 ANYYIIAGLKEKAIIYLKKCEDIVSKSK------DALGYNHLISHYASLGNKDEMMKFWG 303
+I+GL + K D+ + K D+ YN +I L N ++ M +
Sbjct: 802 ----MISGLARVGNVLEAK--DLFERFKSSGGIPDSACYNAMIE---GLSNANKAMDAYI 852
Query: 304 L---QKIKCKKQLNRDYITMLGSLVKIGELEEA 333
L ++K + ++ + +L +L K LE+A
Sbjct: 853 LFEETRLKGCRIYSKTCVVLLDALHKADCLEQA 885
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 115/276 (41%), Gaps = 51/276 (18%)
Query: 175 YNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDN--------------------------- 207
YN ++ L T E + +L +M G P N
Sbjct: 135 YNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMR 194
Query: 208 -FSYRICINSY----GARS---ELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
F +R ++Y GA S E M +L++M+ + + ++T+ + G
Sbjct: 195 KFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGY-EVTVHLFTTLICVFAREGRV 253
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD--Y 317
+ A+ L + + S + D + YN I + +G D KF+ ++K + + D +
Sbjct: 254 DAALSLLDEMKS-NSFNADLVLYNVCIDCFGKVGKVDMAWKFF--HELKSQGLVPDDVTF 310
Query: 318 ITMLGSLVKIGELEEAEKMLEEWE----LSC-YCYDFRVPNIILLGYSQKGMIEKADAVL 372
+M+G L K ++EA ++ EE + + C Y Y N +++GY G +A ++L
Sbjct: 311 TSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAY-----NTMIMGYGSVGKFNEAYSLL 365
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMK 408
+ +KG P+ +++ I K +E+A ++
Sbjct: 366 ERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILE 401
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 53/291 (18%), Positives = 131/291 (45%), Gaps = 8/291 (2%)
Query: 93 EWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETY--FNSLNDED-KVD-KLYGALLNCYV 148
E + QGL V +++ + G V+G S +TY F + ++ +D + Y +++ +
Sbjct: 575 EEIKAQGLTPDVRSYSILIH--GLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFC 632
Query: 149 REGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNF 208
+ G V+++ L+++MK G + + Y ++ + ++ + + K V +
Sbjct: 633 KSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVV 692
Query: 209 SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKK 268
Y I+ +G + +L+E+ Q ++ + T++ + + + A ++A++ +
Sbjct: 693 VYSSLIDGFGKVGRIDEAYLILEEL-MQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQN 751
Query: 269 CEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIG 328
+++ + + Y+ +++ + ++ FW + + K Y TM+ L ++G
Sbjct: 752 MKNLKCPPNE-VTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVG 810
Query: 329 ELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
+ EA+ + E ++ S D N ++ G S A + +E KG
Sbjct: 811 NVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKG 861
>gi|449436321|ref|XP_004135941.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Cucumis sativus]
gi|449514880|ref|XP_004164505.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Cucumis sativus]
Length = 477
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 145/332 (43%), Gaps = 15/332 (4%)
Query: 61 VLEGQKISELELQRVIRQLRSRKRFKHALQVS---EWMSGQGLAFSVHDHAVQLDLIGKV 117
+L Q+ E Q + L + K Q S E M +GL S+ + + G+
Sbjct: 116 LLRQQQWYEPRCQTYTKLLMLLGKCKQPEQASLLFEIMFSEGLKPSIDVYTALVSAYGQS 175
Query: 118 RGLESAETYFN---SLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALN 174
L A + + S++D Y L++C R D ++ M +G + +
Sbjct: 176 GLLHKAISTVDEMKSISDCKPDVHTYSILIDCCTRLRRFDLLKKILADMSCLGITCNTVT 235
Query: 175 YNGIMCLYTNTGQHEKIPDVLLDMKE-NGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
YN I+ + E++ +LL+M E + PPD ++ I +YG ++ ME +E
Sbjct: 236 YNTIINGFGKAKMFEQMESLLLEMIESDSCPPDLITFNTFIRAYGNSEQIEKMEKWYKEF 295
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK---SKDALGYNHLISHYA 290
+ I D TY+++ + Y AG+ +K +K + + K S + N +I +
Sbjct: 296 QLMG-IEPDIWTYNSMISSYGKAGMYDK----MKSVLNFMEKRFFSPTIVTMNTIIDSFG 350
Query: 291 SLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFR 350
GN +EM +++ K + K + Y +++ + K G+LE+ + +L + E S D
Sbjct: 351 RAGNIEEMEEYFKNMKFQGMKPNSVTYCSLVNAYGKSGDLEKVDSILRQIENSDVVPDTP 410
Query: 351 VPNIILLGYSQKGMIEKADAVLKEIVKKGKTP 382
+ N ++ Y Q G + K + E+ + P
Sbjct: 411 LFNCLINVYGQAGNVRKMGELFLEMKENKCVP 442
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 107/252 (42%), Gaps = 16/252 (6%)
Query: 246 YSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWG-- 303
Y+ + + Y +GL KAI + + + I D Y+ LI L D + K
Sbjct: 165 YTALVSAYGQSGLLHKAISTVDEMKSISDCKPDVHTYSILIDCCTRLRRFDLLKKILADM 224
Query: 304 -LQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCY-DFRVPNIILLGYSQ 361
I C Y T++ K E+ E +L E S C D N + Y
Sbjct: 225 SCLGITCN---TVTYNTIINGFGKAKMFEQMESLLLEMIESDSCPPDLITFNTFIRAYGN 281
Query: 362 KGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWR 421
IEK + KE G P +++ + + Y +K MK L E+ +F+
Sbjct: 282 SEQIEKMEKWYKEFQLMGIEPDIWTYNSMISSYGKAGMYDK----MKSVLNFMEK-RFFS 336
Query: 422 PKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRN--MYHALTEAHIRSG--QEVDGL 477
P +++I+D G ++EE+E + ++K + K N Y +L A+ +SG ++VD +
Sbjct: 337 PTIVTMNTIIDSFGRAGNIEEMEEYFKNMKFQGMKPNSVTYCSLVNAYGKSGDLEKVDSI 396
Query: 478 LESMKADDIDED 489
L ++ D+ D
Sbjct: 397 LRQIENSDVVPD 408
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 58/112 (51%), Gaps = 2/112 (1%)
Query: 111 LDLIGKVRGLESAETYFNSLNDED-KVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGS 168
+D G+ +E E YF ++ + K + + Y +L+N Y + G +++ S++++++
Sbjct: 346 IDSFGRAGNIEEMEEYFKNMKFQGMKPNSVTYCSLVNAYGKSGDLEKVDSILRQIENSDV 405
Query: 169 FGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGAR 220
+N ++ +Y G K+ ++ L+MKEN PD ++ I + A+
Sbjct: 406 VPDTPLFNCLINVYGQAGNVRKMGELFLEMKENKCVPDGITFATMIRALKAQ 457
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 1/121 (0%)
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
+++ + R G ++E + MK G +++ Y ++ Y +G EK+ +L ++ +
Sbjct: 344 TIIDSFGRAGNIEEMEEYFKNMKFQGMKPNSVTYCSLVNAYGKSGDLEKVDSILRQIENS 403
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
V PD + IN YG + M + EM+ + D T++T+ G+ E
Sbjct: 404 DVVPDTPLFNCLINVYGQAGNVRKMGELFLEMKENKCVP-DGITFATMIRALKAQGMTED 462
Query: 262 A 262
A
Sbjct: 463 A 463
>gi|297606902|ref|NP_001059180.2| Os07g0213300 [Oryza sativa Japonica Group]
gi|215767816|dbj|BAH00045.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677604|dbj|BAF21094.2| Os07g0213300 [Oryza sativa Japonica Group]
Length = 677
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 151/358 (42%), Gaps = 55/358 (15%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +LL Y G+ E+L++ +K+ G ++Y ++ Y + Q EK +V MK
Sbjct: 226 YNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMK 285
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS---------------------- 237
+N P+ SY I++YG+ L +L EME
Sbjct: 286 KNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQIT 345
Query: 238 ------------HISMDWGTYSTVANYYIIAGLKEKAI-IYLKKCEDIVSKSKDALGYNH 284
I ++ Y++ Y+ G EKA+ +Y E V DA+ YN
Sbjct: 346 RIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNV--KPDAVTYNI 403
Query: 285 LISHYASLGNKDEMMKFWG---LQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWE 341
LIS + LG E ++F+ K+ K++ Y +++ S +K G+L EAE +
Sbjct: 404 LISGSSKLGKYTESLRFFEDMVDSKVSSTKEV---YSSLIYSYIKQGKLSEAESTFSSMK 460
Query: 342 LSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNME 401
S D ++ Y+ G ++A + KE+ G P S + + E
Sbjct: 461 KSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPE 520
Query: 402 KAFECM----KEALAVHEENKFWRPKPSLVSS---ILDWLGDNRDVEEVEAFVSSLKI 452
+ + M K+++ +++++ F +++S I DW + +E +++ +SS+ +
Sbjct: 521 RVLQLMEFMKKKSIPLNQKSYF-----EIIASCTMIRDWKTASEMIEYLDSSLSSISV 573
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 151/362 (41%), Gaps = 54/362 (14%)
Query: 137 DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
+ +YG ++ Y R VD++ L +M+E A YN ++ ++ GQ +++
Sbjct: 11 NDIYGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIME 70
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
DM +PP +Y IN+ GA + ++M +++ + D T++ V
Sbjct: 71 DMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKM-TENGVGPDLVTHNIV------- 122
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
+S K+ Y+ IS++ E+MK G LN
Sbjct: 123 ----------------LSALKNGAQYSKAISYF-------EIMK--GANVTSDTFTLN-- 155
Query: 317 YITMLGSLVKIGELEEAEKM---LEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
++ LVKIG+ EA ++ + E C D I+ Y G +E A+
Sbjct: 156 --IIIHCLVKIGQCGEAIELFNSMRERRTKC-PPDVVTYTSIMHSYCIYGQVENCKAIFD 212
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVS--SIL 431
+V +G P +++ + YA + +EALA+ K +P +VS S+L
Sbjct: 213 LMVAEGVKPNIVAYNSLLGAYASRG-------MHREALAIFNLIKKNGLRPDIVSYTSLL 265
Query: 432 DWLGDNRDVEEVEAFVSSLKIKVQKRN--MYHALTEAHIRSG--QEVDGLLESMKADDID 487
+ G + E+ + +K K N Y+AL +A+ +G +E GLL M+ D I
Sbjct: 266 NAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQ 325
Query: 488 ED 489
D
Sbjct: 326 PD 327
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/419 (19%), Positives = 169/419 (40%), Gaps = 48/419 (11%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE- 133
V+ L++ ++ A+ E M G + + + + K+ A FNS+ +
Sbjct: 122 VLSALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERR 181
Query: 134 -----DKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQH 188
D V Y ++++ Y G V+ ++ M G + + YN ++ Y + G H
Sbjct: 182 TKCPPDVVT--YTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMH 239
Query: 189 EKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYST 248
+ + +K+NG+ PD SY +N+YG ++ V +M+ S + +Y+
Sbjct: 240 REALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNS-CKPNKVSYNA 298
Query: 249 VANYYIIAGLKEKAIIYLKKCE------DIVSKSK------------------------- 277
+ + Y AG+ ++A+ L + E D+VS S
Sbjct: 299 LIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRG 358
Query: 278 ---DALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
+ + YN I Y S G+ ++ ++ + + K Y ++ K+G+ E+
Sbjct: 359 IDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESL 418
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGY 394
+ E+ S V + ++ Y ++G + +A++ + K G P +++ + Y
Sbjct: 419 RFFEDMVDSKVSSTKEVYSSLIYSYIKQGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAY 478
Query: 395 ADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK 453
++A++ KE E N P + SS+++ + E V + +K K
Sbjct: 479 NAGGGWKRAWDLFKEM----EVNGI-PPDAIICSSLMEAFNKGGEPERVLQLMEFMKKK 532
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 102/219 (46%), Gaps = 21/219 (9%)
Query: 133 EDKVD-------KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNT 185
ED VD ++Y +L+ Y+++G + E+ S MK+ G F L Y ++ Y
Sbjct: 422 EDMVDSKVSSTKEVYSSLIYSYIKQGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAG 481
Query: 186 GQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEME--SQSHISMDW 243
G ++ D+ +M+ NG+PPD IC + A ++ E VLQ ME + I ++
Sbjct: 482 GGWKRAWDLFKEMEVNGIPPDAI---ICSSLMEAFNKGGEPERVLQLMEFMKKKSIPLNQ 538
Query: 244 GTY-STVANYYIIAGLKEKA--IIYLKKCEDIVSKSKDALG-YNHLISHYASLGNKDEMM 299
+Y +A+ +I K + I YL S S ++G NH+++ G + MM
Sbjct: 539 KSYFEIIASCTMIRDWKTASEMIEYLDS-----SLSSISVGTLNHVLNFLGKCGKTENMM 593
Query: 300 KFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLE 338
K + C Y +L +L+ +G+ + ++L+
Sbjct: 594 KLFYKMVTSCSTVGLSTYAVVLRNLLVVGKWRKYIEVLQ 632
>gi|449438488|ref|XP_004137020.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 146
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 66/137 (48%), Gaps = 25/137 (18%)
Query: 33 PVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVS 92
P + L+ R+ GDP S+ VLDQWV EG+++ + +LQ +I+QLR RF ALQ+
Sbjct: 32 PSTEDTLFRRVYRAGDPRTSIVRVLDQWVEEGRQVKQSDLQTLIKQLRKFGRFNQALQLC 91
Query: 93 EWMSGQ-GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREG 151
EW+ + S D AV K Y A+LN Y G
Sbjct: 92 EWVRNERNQCLSTGDIAVV------------------------KTPLSYNAMLNLYAHLG 127
Query: 152 LVDESLSLMQKMKEMGS 168
++ L+++M+EMG+
Sbjct: 128 KHEKLAELLKEMEEMGT 144
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 145/340 (42%), Gaps = 4/340 (1%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I + K A + M +G++ V ++ + + L+ A FN + E+
Sbjct: 231 IIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILEN 290
Query: 135 KVDKLY--GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+Y L+N + ++G + E ++ M + G + + YN +M Y + K
Sbjct: 291 IKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAK 350
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
+ M + GV PD SY I IN + + N+ +EM ++ I D TYS++ +
Sbjct: 351 SIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIP-DVVTYSSLIDG 409
Query: 253 YIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQ 312
+G A+ + + D + YN ++ D+ + K K +
Sbjct: 410 LSKSGRISYALQLVDQMHD-RGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQP 468
Query: 313 LNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
Y ++ L + G+LE+A K+ E+ + Y D I++ G+ +G+ +A A+L
Sbjct: 469 DISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALL 528
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
++ G P ++ II K+ + A + ++E +A
Sbjct: 529 SKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIA 568
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 69/340 (20%), Positives = 144/340 (42%), Gaps = 25/340 (7%)
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGI---MCLYTNTGQHEKIPDVLLDMK 199
L+NC+ + GL+ + S+ K+ +MG + + + +CL Q D ++ +
Sbjct: 126 LINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVAL- 184
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMES---QSHISMDWGTYSTVANYYIIA 256
G D SY I+ E + ++LQ ++ Q ++ M Y+T+ +
Sbjct: 185 --GFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVM----YNTIIDSMCKV 238
Query: 257 GLKEKAIIYLKKCEDIVSK--SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN 314
L +A ++VSK S D + Y+ LIS + LG + + + ++ K
Sbjct: 239 KLVNEAFDLF---SEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDV 295
Query: 315 RDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
+ ++ + K G+++E + + + +F N ++ GY + KA ++
Sbjct: 296 YTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNT 355
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWL 434
+ + G P S+SI+ G+ ++A KE +H +N P SS++D L
Sbjct: 356 MAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKE---MHRKNII--PDVVTYSSLIDGL 410
Query: 435 GDNRDVEEVEAFVSSLKIKVQKRNM--YHALTEAHIRSGQ 472
+ + V + + N+ Y+++ +A ++ Q
Sbjct: 411 SKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQ 450
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 84/400 (21%), Positives = 172/400 (43%), Gaps = 16/400 (4%)
Query: 82 RKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL-- 139
+K+F A ++ WM QG + V + ++ + K + A F+ + + +
Sbjct: 162 KKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVAC 221
Query: 140 YGALLNCYVREGLVDESLSLMQK-MKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
Y L++ + ++G + + + ++ +K + + +YN ++ G+ ++ ++ M
Sbjct: 222 YNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRM 281
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
K+N D ++Y I+ L V +EM +++ +S D Y+T+ N Y+ AG
Sbjct: 282 KKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEM-AENGVSPDVVVYNTMLNGYLRAGR 340
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGL--QKIKCKKQLNRD 316
E+ + K E + + YN LI DE + W L +K C +
Sbjct: 341 IEECLELWKVMEK--EGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMT-- 396
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y ++ L K G L +A +LEE E D + ++ G ++G +++ VL ++
Sbjct: 397 YGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMT 456
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGD 436
K G P P+ + + G+ + +E A ++ K P +++++ L
Sbjct: 457 KHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVS-----KGCFPTVVTYNTLINGLSK 511
Query: 437 NRDVEEVEAFVSSLKIKVQKRNMY-HALTEAHIRSGQEVD 475
E A V + K K NM ++L + G+++D
Sbjct: 512 AERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLD 551
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 113/264 (42%), Gaps = 2/264 (0%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +LLN + DE+ S + MG + YN ++ + Q +K ++L M
Sbjct: 117 YNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMW 176
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E G PD FSY INS +S + EM + ++ D Y+ + + + G
Sbjct: 177 EQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERG-VTPDVACYNILIDGFFKKGDI 235
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
A ++ S + YN +I+ G DE + W K + Q Y T
Sbjct: 236 LNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYST 295
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
++ L G L+ A ++ +E + D V N +L GY + G IE+ + K + K+G
Sbjct: 296 LIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG 355
Query: 380 KTPTPNSWSIIAAGYADKNNMEKA 403
T S++I+ G + +++A
Sbjct: 356 -CRTVVSYNILIRGLFENAKVDEA 378
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 111/279 (39%), Gaps = 11/279 (3%)
Query: 120 LESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM 179
LE AE N D D Y +++N REG +DE ++ +M + G + N ++
Sbjct: 417 LEEAE---NGRGDLDTFA--YSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVI 471
Query: 180 CLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHI 239
+ + E +M G P +Y IN S +++EM +
Sbjct: 472 NGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGW- 530
Query: 240 SMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSK-DALGYNHLISHYASLGNKDEM 298
+ TYS + N + G K + L C+ + K D +N +I S G ++
Sbjct: 531 KPNMITYSLLMNG-LCQGKKLDMALNLW-CQALEKGFKPDVKMHNIIIHGLCSSGKVEDA 588
Query: 299 MKFWG-LQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL 357
++ + +++ KC L + T++ K+ + E A K+ + D NI L
Sbjct: 589 LQLYSEMKQRKCVPNL-VTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLK 647
Query: 358 GYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYAD 396
G I A L + V +G PT +W+I+ D
Sbjct: 648 GLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLD 686
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 133/306 (43%), Gaps = 14/306 (4%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM-CLYTNTGQHEKIPDVLLD 197
+Y +LN Y+R G ++E L L + M++ G + ++YN ++ L+ N E I +
Sbjct: 327 VYNTMLNGYLRAGRIEECLELWKVMEKEGC-RTVVSYNILIRGLFENAKVDEAI-SIWEL 384
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
+ E D+ +Y + ++ L+ ++L+E E+ +D YS++ N G
Sbjct: 385 LPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAEN-GRGDLDTFAYSSMINGLCREG 443
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
++ L + K + N +I+ + ++ ++F+G K Y
Sbjct: 444 RLDEVAGVLDQMTKHGCKPNPHVC-NAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTY 502
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
T++ L K EA +++E + + ++++ G Q ++ A + + ++
Sbjct: 503 NTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALE 562
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVS--SILDWLG 435
KG P +II G +E +AL ++ E K + P+LV+ ++++
Sbjct: 563 KGFKPDVKMHNIIIHGLCSSGKVE-------DALQLYSEMKQRKCVPNLVTHNTLMEGFY 615
Query: 436 DNRDVE 441
RD E
Sbjct: 616 KVRDFE 621
>gi|302801862|ref|XP_002982687.1| hypothetical protein SELMODRAFT_422000 [Selaginella moellendorffii]
gi|300149786|gb|EFJ16440.1| hypothetical protein SELMODRAFT_422000 [Selaginella moellendorffii]
Length = 541
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 82/443 (18%), Positives = 186/443 (41%), Gaps = 44/443 (9%)
Query: 53 LTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEW-MSGQGLAFSVHDHAVQL 111
+ L W EG ++ + ++I +L +R + +++ W + + + DH V++
Sbjct: 125 IVAALKDWQSEGNLVTRDVIYKLIIRLHARMFYFQGMKLMNWVIVEKPFQLTDFDHLVRM 184
Query: 112 DLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGS 171
D + ++ T FN + +DK + Y LL + + +L ++++MKE+ +
Sbjct: 185 DFHTRELKVDKVLTCFNRI--QDKTETCYVLLLQAFATAHRKERALDVLKQMKELVLITN 242
Query: 172 ALNYNGIMCLYTNTGQHEKIPDVLLDMKE-NGVPPDNFSYRICINSYGARSELSSMENVL 230
+YN ++ +Y G ++ ++ ++K+ + V PD F+Y L
Sbjct: 243 PYSYNLVIAMYLRMGLIDEAKEMFAELKDKSNVAPDAFTY-------------------L 283
Query: 231 QEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYA 290
++S+ + MD T+ +++ V K + +LI Y
Sbjct: 284 NLLKSRDALGMD-DLEDTIEEFFL-----------------DVDKIPTGFEWRNLIRLYG 325
Query: 291 SLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFR 350
++G K ++ + W QK + ++ + S GE+++ E++ ++ E R
Sbjct: 326 AMGKKKDVERLWREQKRVAEYMPESYFLAAIESFGMNGEMKQFEEICKQLEAQNQKLSER 385
Query: 351 VPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEA 410
+L Y G++ A+ K++ + + + +GY +++ KA E EA
Sbjct: 386 QCFTMLKVYCMNGLMNDAERTAKKMEELRYKLGFKGYHYLVSGYVNRHQFVKATEKFSEA 445
Query: 411 LAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSS-LKIKVQKRN--MYHALTEAH 467
F P V ++L+ +++E+ E V LK K + +++AL + +
Sbjct: 446 EEKGLAKGFKNPLFVTVLTLLEAYAGKKELEKAEEMVEKVLKTKHYPYDIRLFNALLKVY 505
Query: 468 IRSGQEVDGLLESMKADDIDEDK 490
R + G+ +K ++ ++
Sbjct: 506 RRCQKPAWGIENRIKEAKLEPNE 528
>gi|302761054|ref|XP_002963949.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
gi|300167678|gb|EFJ34282.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
Length = 1365
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/357 (19%), Positives = 149/357 (41%), Gaps = 62/357 (17%)
Query: 101 AFSVHDHAVQLDLI---GKVRGLESAETYFNSLNDEDKV--DKLYGALLNCYVREGLVDE 155
AF V D A+ + +I GK++ ++AE F L Y ALL+ Y G +
Sbjct: 640 AFDVKDSAMHVAIIASYGKLKLWQNAEIVFRDLQQHGFAGNTSAYSALLSAYAETGNFER 699
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
+ + M G +A N ++ + G+ ++I + + E G+ P++ ++ + +
Sbjct: 700 ATRALDNMVAAGLQPNATCANYVLEAFGRAGKAKEISEFFQRLPEMGISPNSRTFVVIFH 759
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK 275
++ L ++ ++M+ + G ++ + + L + + + E +
Sbjct: 760 AFSRNGNLEEARSMYRQMK-------EAGFSPSIQVFKALLALYSRETVEIDAEELVKDI 812
Query: 276 SKDALG-----YNHLISHYASLGN-KDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGE 329
K L YNH+IS Y+ LG+ ++ + F G+Q+I C
Sbjct: 813 KKAGLELDIDIYNHMISLYSKLGSYRNAALVFKGMQEIGCSP------------------ 854
Query: 330 LEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSI 389
D N +++ YS+ M+++A A+L+E++K G P ++++
Sbjct: 855 ------------------DATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTT 896
Query: 390 IAAGYADKNNMEKA---FECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEV 443
+ + Y E A F+ + E + + +++ ++ G++R +EE+
Sbjct: 897 LISAYGRLQAYEDAELVFKSIAETGCKPDATAY-----NVMINVYRKAGEHRKIEEI 948
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 74/154 (48%), Gaps = 6/154 (3%)
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE----DKVDKL 139
R A+ + E M QG + + + + G+ +E+A + F + ++ D V
Sbjct: 211 RLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVT-- 268
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ++L+ + R+G ++E + M++ + YN ++ +Y G H K ++ + MK
Sbjct: 269 YNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMK 328
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
E G PD+ ++ + I++ G ++ + ++M
Sbjct: 329 EEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDM 362
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 136/325 (41%), Gaps = 24/325 (7%)
Query: 93 EWMSGQGLAFSVHDHAVQLDLI------------GKVRGLESA---ETYFNSLNDEDKVD 137
+W S Q L + D + DL+ G GL S+ + Y L +
Sbjct: 140 DWNSVQQLLCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLLQDVYAAGLRPDTIT- 198
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
Y L++ + +++ + ++M+ G YN ++ +Y G+ E +
Sbjct: 199 --YNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRI 256
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
M+E G PD +Y ++++ + +E + + M + S D TY+T+ + Y AG
Sbjct: 257 MQEQGFTPDAVTYNSVLHAFARDGRIEEVERI-RGMMRDARCSSDEITYNTMIHMYGKAG 315
Query: 258 LKEKA-IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMK-FWGLQKIKCKKQLNR 315
+ KA +Y++ E+ + D++ + LI G +E F + K + + L +
Sbjct: 316 MHRKAEELYVQMKEE--GRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTL-Q 372
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
+ M+ + K +AE + D +++L + + GM EK + K +
Sbjct: 373 AFSAMICAYAKADMFTDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKAGMPEKCIILYKAM 432
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNM 400
V G P + ++I+ + K+++
Sbjct: 433 VGSGLKPELSVYAIMVRVFYQKSSV 457
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 111/276 (40%), Gaps = 43/276 (15%)
Query: 175 YNGIMCLY-----------------------------------TNTGQHEKIPDVLL-DM 198
YN +M +Y T G E + LL D+
Sbjct: 128 YNSLMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLLQDV 187
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
G+ PD +Y I++ + LS + +EM+ Q W TY+ + + Y AG
Sbjct: 188 YAAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIW-TYNAMISVYGRAGR 246
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQK-IKCKKQLNRDY 317
E A + ++ + DA+ YN ++ +A G +E+ + G+ + +C Y
Sbjct: 247 VEAASSIFRIMQE-QGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSD-EITY 304
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
TM+ K G +AE++ + + C D +++ + G + +A A+ ++++K
Sbjct: 305 NTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLK 364
Query: 378 KGKTPTPNSWSIIAAGYADKN---NMEKAFECMKEA 410
PT ++S + YA + + E + CM A
Sbjct: 365 SQVRPTLQAFSAMICAYAKADMFTDAEHTYSCMLRA 400
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 65/132 (49%), Gaps = 1/132 (0%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L++ Y R +++ + + + E G A YN ++ +Y G+H KI +++ MK
Sbjct: 894 YTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEIIEQMK 953
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+G P + + ++SYG E VL+ + + +S D Y+++ N ++
Sbjct: 954 VDGFEPSLTTIHMLMDSYGKGGATGKAEEVLETL-PEIGMSPDAIHYTSIINSHLNNKDY 1012
Query: 260 EKAIIYLKKCED 271
A+I+L+K D
Sbjct: 1013 LSAVIWLRKMTD 1024
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 75/168 (44%), Gaps = 4/168 (2%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ L+ Y R +V E+ +L+++M + G+ + Y ++ Y +E V +
Sbjct: 859 FNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIA 918
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E G PD +Y + IN Y E +E ++++M+ T + + Y G
Sbjct: 919 ETGCKPDATAYNVMINVYRKAGEHRKIEEIIEQMKVDG-FEPSLTTIHMLMDSYGKGGAT 977
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKI 307
KA L+ +I S DA+ Y +I+ + L NKD + L+K+
Sbjct: 978 GKAEEVLETLPEI-GMSPDAIHYTSIINSH--LNNKDYLSAVIWLRKM 1022
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/369 (19%), Positives = 155/369 (42%), Gaps = 44/369 (11%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
++ AL + + E + +E+L KMK F + NG++ + G+ + + DM
Sbjct: 65 VFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDM 124
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
G P F+Y I I+ ++ + + +EM+ + I D TY+++ + Y G
Sbjct: 125 IGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIP-DTVTYNSMIDGYGKVGR 183
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFW------GLQK------ 306
+ + + ++ + + S D + YN LI+ + G + ++F+ GL+
Sbjct: 184 LDDTVYFFEEMKSM-SCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYS 242
Query: 307 ----IKCKKQL-------------------NRDYITMLGSLVKIGELEEAEKMLEEWELS 343
CK+ + Y +++ + KIG L +A ++ +E
Sbjct: 243 TLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQV 302
Query: 344 CYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
++ ++ G I++A+ + ++V G P S++ + G+ NM++A
Sbjct: 303 GVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRA 362
Query: 404 FECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRN--MYH 461
E + E + + +P L + + L +E + ++ ++ K K N +Y
Sbjct: 363 LELLDEM-----KGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYT 417
Query: 462 ALTEAHIRS 470
L +A+ +S
Sbjct: 418 TLMDAYFKS 426
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 140/333 (42%), Gaps = 22/333 (6%)
Query: 21 LEIFTRAYRA-VKPVAR--NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIR 77
L+ F++ R V P R N L + + LG D + + G K + +I
Sbjct: 83 LQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTD-GMKRFFKDMIGAGSKPTVFTYNIMID 141
Query: 78 QLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYF---NSLNDED 134
+ + A + E M +GL + +D GKV L+ +F S++ E
Sbjct: 142 CMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEP 201
Query: 135 KVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDV 194
V Y L+NC+ + G + + L ++MK+ G + ++Y+ ++ + ++
Sbjct: 202 DV-ITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKF 260
Query: 195 LLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYI 254
+DM+ G+ P+ +Y +++Y LS + EM S + ++W + A +
Sbjct: 261 YVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEM---SQVGVEWNVVTYTA---L 314
Query: 255 IAGLKEKAIIYLKKCEDIVSKSKDA------LGYNHLISHYASLGNKDEMMKFWGLQKIK 308
I GL + + +K+ E++ K A Y LI + N D ++ K +
Sbjct: 315 IDGLCD--VERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGR 372
Query: 309 CKKQLNRDYITMLGSLVKIGELEEAEKMLEEWE 341
K Y T + SL + ++E A+ ++ E +
Sbjct: 373 GIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQ 405
>gi|242083798|ref|XP_002442324.1| hypothetical protein SORBIDRAFT_08g018230 [Sorghum bicolor]
gi|241943017|gb|EES16162.1| hypothetical protein SORBIDRAFT_08g018230 [Sorghum bicolor]
Length = 647
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 87/169 (51%), Gaps = 11/169 (6%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L++ + + DE+L L +KMK +G + YN ++ +Y TG++++I V DM+
Sbjct: 167 YSTLMDGFSKLEKYDEALKLREKMKSLGIQLDRVCYNTLLAIYVKTGKYDEIATVCEDME 226
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G+ D +Y IN YG + L + ++Q+M +Q ++ TYST+ + Y AG+
Sbjct: 227 NLGIEKDTVTYNSLINGYGKQGRLDMVAFLVQDMRAQG-VAPSVLTYSTLIDIYSKAGMH 285
Query: 260 EKAI-IYLKKCE-----DIV--SKSKDALGYNHLISHYASLGNKDEMMK 300
A +YL E D+V S D L N L+ SL DEM+K
Sbjct: 286 GDAFNVYLDFKESGLKADVVLFSSFIDTLAKNGLVECALSL--LDEMIK 332
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 143/317 (45%), Gaps = 17/317 (5%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAET--YFNS-LNDEDKVD-KLYGAL 143
A+ V E M G GL + + +D GK G++ T YF L D D K + +L
Sbjct: 42 AMGVLESMKGAGLRPTTVSYNAVIDACGK-GGVDLRFTLGYFRQMLQDGLCPDRKTFNSL 100
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
L R G ++++ ++ +M +GS YN + G E V+LDM+ N +
Sbjct: 101 LAACSRAGHLEDARTVFDEMIHLGSGRDIYTYNTFVDAICKCGNMELATQVVLDMEANNI 160
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG-LKEKA 262
P+ +Y ++ + + + ++M+S I +D Y+T+ Y+ G E A
Sbjct: 161 KPNVVTYSTLMDGFSKLEKYDEALKLREKMKSLG-IQLDRVCYNTLLAIYVKTGKYDEIA 219
Query: 263 IIYLKKCEDI--VSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR--DYI 318
+ CED+ + KD + YN LI+ Y G D M+ F +Q ++ + Y
Sbjct: 220 TV----CEDMENLGIEKDTVTYNSLINGYGKQGRLD-MVAFL-VQDMRAQGVAPSVLTYS 273
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
T++ K G +A + +++ S D + + + ++ G++E A ++L E++K
Sbjct: 274 TLIDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLAKNGLVECALSLLDEMIKM 333
Query: 379 GKTPTPNSWSIIAAGYA 395
G P +++ I +
Sbjct: 334 GIKPNVVTYNTIIDAFG 350
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 131/305 (42%), Gaps = 12/305 (3%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP-DVLLDM 198
+ AL++ Y R GL E++ +++ MK G + ++YN ++ G + M
Sbjct: 26 HSALISAYARSGLATEAMGVLESMKGAGLRPTTVSYNAVIDACGKGGVDLRFTLGYFRQM 85
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
++G+ PD ++ + + L V EM D TY+T + G
Sbjct: 86 LQDGLCPDRKTFNSLLAACSRAGHLEDARTVFDEMIHLGS-GRDIYTYNTFVDAICKCGN 144
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKK-QLNRD- 316
E A + E K + + Y+ L+ ++ L DE +K +K+K QL+R
Sbjct: 145 MELATQVVLDMEANNIK-PNVVTYSTLMDGFSKLEKYDEALKLR--EKMKSLGIQLDRVC 201
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y T+L VK G+ +E + E+ E D N ++ GY ++G ++ +++++
Sbjct: 202 YNTLLAIYVKTGKYDEIATVCEDMENLGIEKDTVTYNSLINGYGKQGRLDMVAFLVQDMR 261
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGD 436
+G P+ ++S + Y+ AF + +E+ + L SS +D L
Sbjct: 262 AQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLD----FKESGL-KADVVLFSSFIDTLAK 316
Query: 437 NRDVE 441
N VE
Sbjct: 317 NGLVE 321
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 160/354 (45%), Gaps = 26/354 (7%)
Query: 104 VHDHAVQLDLIGKVRGLESAETYFNSLNDE--DKVDKLYGALLNCYVREGLVDESLSLMQ 161
+H H ++ GK + A F ++ D+ + Y + ++ +EG ++E+ L+
Sbjct: 258 IHGHCLR----GK---FQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLIC 310
Query: 162 KMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARS 221
KM E G +A+ YN ++ Y N G +K +M G+ +Y + I++
Sbjct: 311 KMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEG 370
Query: 222 ELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS--KDA 279
+ +N+++EM + + D T++ + N Y G ++A L +++V K
Sbjct: 371 RMGDADNMIKEMREKGMMP-DAVTHNILINGYCRCGDAKRAFGLL---DEMVGKGIQPTL 426
Query: 280 LGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT---MLGSLVKIGELEEAEKM 336
+ Y LI LG ++ M + L ++ L D I ++ G ++ A ++
Sbjct: 427 VTYTSLI---YVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQL 483
Query: 337 LEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYAD 396
L+E + D N ++ GY ++G +E+A +L E+ ++G P S++ + +GY+
Sbjct: 484 LKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSK 543
Query: 397 KNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL 450
+ +M+ AF E + + P ++++ L N++ E E + +
Sbjct: 544 RGDMKDAFRVRDEMMTTG-----FDPTILTYNALIQGLCKNQEGEHAEELLKEM 592
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 10/176 (5%)
Query: 86 KHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGAL 143
K A + + M G+G+ ++ + + ++GK ++ A+ F+ + E + + + AL
Sbjct: 408 KRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNAL 467
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
++ + G +D + L+++M M + YN +M Y G+ E+ +L +MK G+
Sbjct: 468 IDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGI 527
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY-YIIAGL 258
PD+ SY I+ Y R ++ V EM M G T+ Y +I GL
Sbjct: 528 KPDHISYNTLISGYSKRGDMKDAFRVRDEM-------MTTGFDPTILTYNALIQGL 576
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 121/254 (47%), Gaps = 3/254 (1%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ++ EG + ++ +++++M+E G A+ +N ++ Y G ++ +L +M
Sbjct: 359 YNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMV 418
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G+ P +Y I G R+ + + + +++ + + D ++ + + + G
Sbjct: 419 GKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLP-DIIVFNALIDGHCANGNI 477
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
++A LK+ +++ D + YN L+ Y G +E + K + K + Y T
Sbjct: 478 DRAFQLLKEMDNM-KVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNT 536
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
++ K G++++A ++ +E + + N ++ G + E A+ +LKE+V KG
Sbjct: 537 LISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKG 596
Query: 380 KTPTPNSW-SIIAA 392
TP +++ SII A
Sbjct: 597 ITPDDSTYLSIIEA 610
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 92/474 (19%), Positives = 187/474 (39%), Gaps = 59/474 (12%)
Query: 28 YRAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKI---SELELQRVIRQLRSRKR 84
YR P NL R+ + P + + D+ L ++ + L ++R K+
Sbjct: 104 YRLPSPKPSINLIQRL--ILSPTCTNRTIFDELALARDRVDAKTTLIFDLLVRAYCELKK 161
Query: 85 FKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLY--GA 142
AL+ + +G ++ L L K+ + A + + + LY
Sbjct: 162 PNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNI 221
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
++N +EG + ++ + M+ +G + + YN I+ + G+ ++ + MK+ G
Sbjct: 222 MINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKG 281
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
+ PD ++Y I+ L ++ +M + GL A
Sbjct: 282 LEPDCYTYNSFISGLCKEGRLEEASGLICKM--------------------LEGGLVPNA 321
Query: 263 IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT--- 319
+ YN LI Y NK ++ K + + K + +T
Sbjct: 322 VT-----------------YNALIDGYC---NKGDLDKAYAYRDEMISKGIMASLVTYNL 361
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
+ +L G + +A+ M++E D NI++ GY + G ++A +L E+V KG
Sbjct: 362 FIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKG 421
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRD 439
PT +++ + +N M++A +AL + + P + ++++D N +
Sbjct: 422 IQPTLVTYTSLIYVLGKRNRMKEA-----DALFSKIQQEGLLPDIIVFNALIDGHCANGN 476
Query: 440 VEEVEAFVSSL-KIKVQKRNM-YHALTEAHIRSG--QEVDGLLESMKADDIDED 489
++ + + +KV + Y+ L + + R G +E LL+ MK I D
Sbjct: 477 IDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPD 530
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 86/199 (43%), Gaps = 9/199 (4%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
+LD+ V +G + + + +I L R R K A + + +GL + D V LI
Sbjct: 413 LLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGL---LPDIIVFNALID 469
Query: 116 KVRGLESAETYFNSLNDEDKVDKL-----YGALLNCYVREGLVDESLSLMQKMKEMGSFG 170
+ + F L + D + L Y L+ Y REG V+E+ L+ +MK G
Sbjct: 470 GHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKP 529
Query: 171 SALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVL 230
++YN ++ Y+ G + V +M G P +Y I E E +L
Sbjct: 530 DHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELL 589
Query: 231 QEMESQSHISMDWGTYSTV 249
+EM S+ I+ D TY ++
Sbjct: 590 KEMVSKG-ITPDDSTYLSI 607
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 123/274 (44%), Gaps = 2/274 (0%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+Y L+N +EG V E+ +L+ M + G + Y+ +M Y G+ + + M
Sbjct: 222 IYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAM 281
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
+ GV P+ +SY I IN + N+L+EM ++ + D TY+++ + +G
Sbjct: 282 VQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVP-DTVTYNSLIDGLCKSGR 340
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
A+ + + + D + Y L+ N D+ + K + + Y
Sbjct: 341 ITSALNLMNEMHH-RGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYT 399
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
++ L K G L+ A+++ + + C D +++ G ++GM ++A A+ ++
Sbjct: 400 ALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDN 459
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
G P ++ II +K+ +KA + + E +A
Sbjct: 460 GCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIA 493
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 77/385 (20%), Positives = 152/385 (39%), Gaps = 13/385 (3%)
Query: 34 VARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSE 93
V N L + LG S + VL + + G + + L +++ L + K +L +
Sbjct: 46 VTLNILINCFCHLGQMAFSFS-VLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHD 104
Query: 94 WMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDK--LYGALLNCYVREG 151
+ QG + L+ + K+ A + D +Y +++ ++
Sbjct: 105 KVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDK 164
Query: 152 LVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYR 211
LV+E+ L +M G F A+ Y ++ + GQ +L +M + P + Y
Sbjct: 165 LVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYN 224
Query: 212 ICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA-IIYLKKCE 270
I IN+ + +N+L M + I TYST+ + Y + G + A I+ +
Sbjct: 225 ILINALCKEGNVKEAKNLLAVMTKEG-IKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQ 283
Query: 271 DIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT---MLGSLVKI 327
+ + + YN +I+ DE M L + K + D +T ++ L K
Sbjct: 284 --MGVNPNVYSYNIMINGLCKCKRVDEAMN---LLREMLHKNMVPDTVTYNSLIDGLCKS 338
Query: 328 GELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSW 387
G + A ++ E D +L + ++KA A+ ++ ++G PT ++
Sbjct: 339 GRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTY 398
Query: 388 SIIAAGYADKNNMEKAFECMKEALA 412
+ + G ++ A E + L
Sbjct: 399 TALIDGLCKGGRLKNAQELFQHLLV 423
>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 662
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 130/303 (42%), Gaps = 17/303 (5%)
Query: 176 NGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMES 235
N ++ + G E++ V MKENG+ P ++Y +N + + S E V + MES
Sbjct: 191 NSLIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 250
Query: 236 QSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNK 295
I D TY+T+ Y AG +KA+ L+ E D + Y +I + +
Sbjct: 251 -GRIKPDVVTYNTMIKGYCKAGQTQKALEKLRVME-TKGLEADKITYMTMIQACYADSDF 308
Query: 296 DEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNII 355
+ + K + + ++G L K G+L E + E + + ++
Sbjct: 309 SSCVALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVL 368
Query: 356 LLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE----CMKEAL 411
+ GY++ G +E A +L ++ +G P ++S++ G +E+A + C L
Sbjct: 369 IDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGL 428
Query: 412 AVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRN--MYHALTEAHIR 469
A++ SS++D LG V+E E + K R+ Y+AL +A +
Sbjct: 429 AINS---------MFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTK 479
Query: 470 SGQ 472
G+
Sbjct: 480 HGK 482
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 128/306 (41%), Gaps = 46/306 (15%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+N V VD + + + M+ + YN ++ Y GQ +K + L M+
Sbjct: 225 YNFLMNGLVSAMFVDSAERVFEVMESGRIKPDVVTYNTMIKGYCKAGQTQKALEKLRVME 284
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS------HISMDWG--------- 244
G+ D +Y I + A S+ SS + QEM+ + S+ G
Sbjct: 285 TKGLEADKITYMTMIQACYADSDFSSCVALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLN 344
Query: 245 -------------------TYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHL 285
Y+ + + Y G E AI L + D + D + Y+ +
Sbjct: 345 EGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMID-EGFNPDVVTYSVV 403
Query: 286 ISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEW-ELSC 344
++ G +E M ++ + + Y +++ L K G ++EAE++ EE E C
Sbjct: 404 VNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGC 463
Query: 345 ----YCYDFRVPNIILLGYSQKGMIEKADAVLKEI-VKKGKTPTPNSWSIIAAGYADKNN 399
YCY N ++ +++ G +++A A+ K + ++G T +++I+ +G ++
Sbjct: 464 TRDSYCY-----NALIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTYTILISGMFKEHR 518
Query: 400 MEKAFE 405
E+A +
Sbjct: 519 NEEALK 524
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/286 (19%), Positives = 119/286 (41%), Gaps = 6/286 (2%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
V++ LE KI+ + + I+ + F + + + M +GL H ++ + +
Sbjct: 282 VMETKGLEADKITYMTM---IQACYADSDFSSCVALYQEMDEKGLQVPPHAFSLVIGGLC 338
Query: 116 KVRGLESAETYF-NSLNDEDKVD-KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
K L F N + K + +Y L++ Y + G V++++ L+ +M + G +
Sbjct: 339 KEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVV 398
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
Y+ ++ G+ E+ D + NG+ ++ Y I+ G + E + +EM
Sbjct: 399 TYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEM 458
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLG 293
S+ + D Y+ + + + G ++A+ K+ E+ + Y LIS
Sbjct: 459 -SEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTYTILISGMFKEH 517
Query: 294 NKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEE 339
+E +K W + K + L G++ A K+L+E
Sbjct: 518 RNEEALKLWDMMIDKGITPTAACLRALSTGLCLSGKVARACKILDE 563
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 152/352 (43%), Gaps = 21/352 (5%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
YG L++ + G ++++ +L QK+ G S + Y ++ + ++ DM
Sbjct: 326 YGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMN 385
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G PP +Y + I++ R L +++++M H+ D TY+TV + +
Sbjct: 386 RRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVP-DVVTYNTVMDGLCKSSRV 444
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGL-QKIKCKKQLNRD-- 316
E+A++ + E + + + +N +I D+ + L + + K++ D
Sbjct: 445 EEALLLFNEMERL-GCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGH 503
Query: 317 ------YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVP-NIILLGYSQKGMIEKAD 369
Y T++ L I +++A +LE+ + C V N ++ G + G I++A
Sbjct: 504 VPDVVTYSTLISGLCSIARVDDARHLLEDM-VKRQCKPTVVTQNTLIHGLCKAGRIKEAR 562
Query: 370 AVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSS 429
VL +V G++P +++ + G+ E+A E + + +A + P ++
Sbjct: 563 EVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVA-----RGLAPNVVTYTA 617
Query: 430 ILDWLGDNRDVEEVEAFVSSLKIKVQKRNM--YHALTEAHIRSGQEVDGLLE 479
++ L + E + +K N+ Y AL +GQ VDG L+
Sbjct: 618 LVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQ-VDGGLK 668
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 56/283 (19%), Positives = 114/283 (40%), Gaps = 44/283 (15%)
Query: 159 LMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP-----DNFSYRIC 213
++Q M + G F + + I+C G+ ++ V+ +M+ +PP ++ +C
Sbjct: 66 MVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELC 125
Query: 214 INSYGARS----EL-----SSMENV----------------LQEMESQSHISMDWGTYST 248
+ R+ E+ SS N+ L S+ I + G+ +
Sbjct: 126 LRGSMERAFQLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDS 185
Query: 249 VANYYIIAGLKEKAI-IYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFW-GLQK 306
V + +G ++A+ +Y + + + N L+ + S G D+ + +
Sbjct: 186 VLVGLMDSGRIDEALQVYREN-----RREPCLVTLNVLLEGFCSRGQVDKARELLRAMPD 240
Query: 307 IKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYD------FRVPNIILLGYS 360
+C Y T+L L K G +EEA ++ + EL R NI++LG
Sbjct: 241 EECAPD-EVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLC 299
Query: 361 QKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
Q I++A + +++ ++ +P S+ I+ G A + A
Sbjct: 300 QNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDA 342
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 45/234 (19%), Positives = 97/234 (41%), Gaps = 19/234 (8%)
Query: 175 YNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEME 234
YN ++ + + E + ++ M + G PD+F++ + ++ E V+ EM
Sbjct: 47 YNVLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMR 106
Query: 235 SQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGN 294
S+ I + T S +A+ + G E+A L+ + ++ YN ++
Sbjct: 107 SR-MIPPYFATSSFLAHELCLRGSMERAFQLLE-----IMPVANSSAYNIVVVALCKAAR 160
Query: 295 KDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVP-- 352
D+ ++ K ++L L+ G ++EA ++ E + R P
Sbjct: 161 VDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRE--------NRREPCL 212
Query: 353 ---NIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
N++L G+ +G ++KA +L+ + + P S+ + G +E+A
Sbjct: 213 VTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEA 266
>gi|449467169|ref|XP_004151297.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
gi|449518833|ref|XP_004166440.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
Length = 609
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 120/303 (39%), Gaps = 44/303 (14%)
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
L+N V G E+ + + E G + + Y ++ T + + I +L +M+E G
Sbjct: 63 LMNILVERGKPQEAQFIFNSLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETG 122
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
+ PD+ IN++ + + Q+ME
Sbjct: 123 IKPDSILLNAIINAFSESGNVKEAMEIFQKMEESG------------------------- 157
Query: 263 IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGL-QKIKCKKQLNRDYITML 321
C+ S +N LI Y + +E MK L + K NR Y ++
Sbjct: 158 ------CKPTTST------FNTLIKGYGIIRKPEESMKLLELMTRTTNLKPNNRTYNILV 205
Query: 322 GSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKT 381
G+L K ++EA ++ + S D N + Y+Q G KA++++ +++ K
Sbjct: 206 GALCKKKSIKEAWNVVHQMLASGVQPDVVTYNTLARAYAQDGETNKAESIIVDMLNKKVN 265
Query: 382 PTPNSWSIIAAGYADKNNMEKAFECMKEA--LAVHEENKFWRPKPSLVSSILDWLGDNRD 439
P + II GY ++ N+ +A + L +H + SL+ LD +GD+
Sbjct: 266 PNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNLVIFN---SLIKGFLD-IGDSDG 321
Query: 440 VEE 442
V++
Sbjct: 322 VDK 324
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 123/268 (45%), Gaps = 7/268 (2%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVL-LD 197
L A++N + G V E++ + QKM+E G + +N ++ Y + E+ +L L
Sbjct: 129 LLNAIINAFSESGNVKEAMEIFQKMEESGCKPTTSTFNTLIKGYGIIRKPEESMKLLELM 188
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
+ + P+N +Y I + + + + NV+ +M + S + D TY+T+A Y G
Sbjct: 189 TRTTNLKPNNRTYNILVGALCKKKSIKEAWNVVHQMLA-SGVQPDVVTYNTLARAYAQDG 247
Query: 258 LKEKA-IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKF-WGLQKIKCKKQLNR 315
KA I + V+ ++ G ++ Y GN E ++ + ++ + L
Sbjct: 248 ETNKAESIIVDMLNKKVNPNERTCGI--IVGGYCEQGNLAEALRVVYRMRDLGIHPNL-V 304
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
+ +++ + IG+ + +K L E S D + I+ G+S G ++K + ++
Sbjct: 305 IFNSLIKGFLDIGDSDGVDKALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFDDM 364
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKA 403
+K G P + +SI+A G+ KA
Sbjct: 365 LKSGIEPDIHVFSILAKGFVRAGEPVKA 392
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 100/212 (47%), Gaps = 17/212 (8%)
Query: 137 DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
++ G ++ Y +G + E+L ++ +M+++G + + +N ++ + + G + + L
Sbjct: 268 ERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDIGDSDGVDKALT 327
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
M+E+GV PD ++ +N + + + + + +M +S I D +S +A ++ A
Sbjct: 328 MMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFDDM-LKSGIEPDIHVFSILAKGFVRA 386
Query: 257 GLKEKAIIYLKKCEDIVSK---SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQL 313
G KA L + +SK + + + +IS + + G +M K W + + C +
Sbjct: 387 GEPVKAESLL----NFMSKYGVRPNVVIFTTIISGWCTAG---KMEKAWKVFEHMCDMDV 439
Query: 314 NRDYITMLGSLVKIGE------LEEAEKMLEE 339
+ + T + GE EE +M+EE
Sbjct: 440 SPNLKTFETLIWGYGEAKQPWRAEEILQMMEE 471
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 86/413 (20%), Positives = 178/413 (43%), Gaps = 17/413 (4%)
Query: 70 LELQRVIRQLRSRKR-FKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFN 128
L+ ++ ++ RK+ F A ++ WM QG + V + ++ + K + A F+
Sbjct: 149 LQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFD 208
Query: 129 SLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQK-MKEMGSFGSALNYNGIMCLYTNT 185
+ + + Y L++ + ++G + + + ++ +K + + +YN ++
Sbjct: 209 EMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKC 268
Query: 186 GQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGT 245
G+ ++ ++ MK+N D ++Y I+ L V +EM +++ +S D
Sbjct: 269 GKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEM-AENGVSPDVVV 327
Query: 246 YSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGL- 304
Y+T+ N Y+ AG E+ + K E + + YN LI DE + W L
Sbjct: 328 YNTMLNGYLRAGRIEECLELWKVMEK--EGCRTVVSYNILIRGLFENAKVDEAISIWELL 385
Query: 305 -QKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKG 363
+K C + Y ++ L K G L +A +LEE E D + ++ G ++G
Sbjct: 386 PEKDCCADSMT--YGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREG 443
Query: 364 MIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPK 423
+++ VL ++ K G P P+ + + G+ + +E A ++ K P
Sbjct: 444 RLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVS-----KGCFPT 498
Query: 424 PSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNMY-HALTEAHIRSGQEVD 475
+++++ L E A V + K K NM ++L + G+++D
Sbjct: 499 VVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLD 551
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 113/264 (42%), Gaps = 2/264 (0%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +LLN + DE+ S + MG + YN ++ + Q +K ++L M
Sbjct: 117 YNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMW 176
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E G PD FSY INS +S + EM + ++ D Y+ + + + G
Sbjct: 177 EQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERG-VTPDVACYNILIDGFFKKGDI 235
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
A ++ S + YN +I+ G DE + W K + Q Y T
Sbjct: 236 LNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYST 295
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
++ L G L+ A ++ +E + D V N +L GY + G IE+ + K + K+G
Sbjct: 296 LIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG 355
Query: 380 KTPTPNSWSIIAAGYADKNNMEKA 403
T S++I+ G + +++A
Sbjct: 356 -CRTVVSYNILIRGLFENAKVDEA 378
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 133/306 (43%), Gaps = 14/306 (4%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM-CLYTNTGQHEKIPDVLLD 197
+Y +LN Y+R G ++E L L + M++ G + ++YN ++ L+ N E I +
Sbjct: 327 VYNTMLNGYLRAGRIEECLELWKVMEKEGC-RTVVSYNILIRGLFENAKVDEAI-SIWEL 384
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
+ E D+ +Y + ++ L+ ++L+E E+ +D YS++ N G
Sbjct: 385 LPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAEN-GRGDLDTFAYSSMINGLCREG 443
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
++ L + K + N +I+ + ++ ++F+G K Y
Sbjct: 444 RLDEVAGVLDQMTKHGCKPNPHVC-NAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTY 502
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
T++ L K EA +++E + + ++++ G Q ++ A + + ++
Sbjct: 503 NTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALE 562
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVS--SILDWLG 435
KG P +II G +E +AL ++ E K + P+LV+ ++++
Sbjct: 563 KGFKPDVKMHNIIIHGLCSSGKVE-------DALQLYSEMKQRKCVPNLVTHNTLMEGFY 615
Query: 436 DNRDVE 441
RD E
Sbjct: 616 KVRDFE 621
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/366 (21%), Positives = 159/366 (43%), Gaps = 31/366 (8%)
Query: 120 LESAETYFNSLNDEDKVDKLY--GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNG 177
L SA +F+S+ + +Y L+ G E+LS+++ M+ G +A+ YN
Sbjct: 138 LPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNT 197
Query: 178 IMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS 237
++ + G+ ++ ++ M+E G+ P+ ++ +N + V EM +
Sbjct: 198 LVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEG 257
Query: 238 HISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNK 295
++ D +Y+T+ Y G +A+ ++ K D + + LI GN
Sbjct: 258 -LAPDGVSYNTLVGGYCKVGCSHEALSVFA---EMTRKGIMPDVVTFTSLIHVMCKAGNL 313
Query: 296 DEMMKFWGLQKIKCKKQLNRDYIT---MLGSLVKIGELEEAEKMLEEW-----ELSCYCY 347
+ + GL + ++ L + IT ++ K G L++A + E + S CY
Sbjct: 314 E---RAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCY 370
Query: 348 DFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECM 407
N ++ GY G +++A +++E+ KG P ++S I + Y + AF+
Sbjct: 371 -----NALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLN 425
Query: 408 KEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEA-FVSSLKIKVQKRNM-YHALTE 465
++ L EN P SS++ L + + + + F + + + +Q + Y +L +
Sbjct: 426 QQML----ENGVL-PDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLID 480
Query: 466 AHIRSG 471
H + G
Sbjct: 481 GHCKEG 486
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 154/348 (44%), Gaps = 33/348 (9%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED-KVDKL-YGALLN 145
AL V M+ +G+ V + ++ K LE A + + +++++ + AL++
Sbjct: 281 ALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALID 340
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
+ ++G +D++L +++M++ S + YN ++ Y G+ ++ +++ +M+ GV P
Sbjct: 341 GFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKP 400
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
D +Y +++Y + S + Q+M ++ + D TYS++ A +
Sbjct: 401 DVVTYSTILSAYCKNGDTHSAFQLNQQM-LENGVLPDAITYSSLIRVLCEEKRLGDAHVL 459
Query: 266 LKKCEDIVSKSKDALGYNHLISHYASLGN-------KDEMMKFWGLQKIKCKKQLNRDYI 318
K + D + Y LI + GN DEM+K L + Y
Sbjct: 460 FKNMISL-GLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVV-------TYS 511
Query: 319 TMLGSLVKIGELEEAEKMLEEW-------------ELSCYCYDFRVPNIILL--GYSQKG 363
++ L K +EA+++L + L C + + +++ L G+ KG
Sbjct: 512 VLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKG 571
Query: 364 MIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
++ +AD V + I+ + + +S++ G+ + N+ KA K+ L
Sbjct: 572 LMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQML 619
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 97/468 (20%), Positives = 196/468 (41%), Gaps = 31/468 (6%)
Query: 29 RAVKPVARNNLYSRISPLGDPDVSLTPVLDQW---VLEGQKISELELQRVIRQLRSRKRF 85
RA V+ +L R+S D+ L +D + V S ++ R++ + K++
Sbjct: 145 RASSSVSGGDLRERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKY 204
Query: 86 KHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSL----NDEDKVDKLYG 141
+ + + M G+ ++ + ++ + A + + + D+V G
Sbjct: 205 DVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVT--IG 262
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
+L+N + R V +++SL+ KM E+G + YN I+ T + D +++
Sbjct: 263 SLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK 322
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG--LK 259
G+ P+ +Y +N S S +L +M + I+ + TYS + + ++ G L+
Sbjct: 323 GIRPNVVTYTALVNGLCNSSRWSDAARLLSDM-IKKKITPNVITYSALLDAFVKNGKVLE 381
Query: 260 EKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
K + E++V S D + Y+ LI+ DE + + L K Y
Sbjct: 382 AKELF-----EEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSY 436
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
T++ K +E+ K+ E + N ++ G+ Q G ++KA ++
Sbjct: 437 NTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDF 496
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLV--SSILDWLG 435
G +P +++I+ G D +EK AL + E+ + +V ++++ +
Sbjct: 497 FGISPDIWTYNILLGGLCDNGELEK-------ALVIFEDMQKREMDLDIVTYTTVIRGMC 549
Query: 436 DNRDVEEVEAFVSSLKIKVQKRNMYHALTEAHIRSGQEVDGLLESMKA 483
VEE + SL +K K ++ +T + SG GLL ++A
Sbjct: 550 KTGKVEEAWSLFCSLSLKGLKPDI---VTYTTMMSGLCTKGLLHEVEA 594
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 95/432 (21%), Positives = 174/432 (40%), Gaps = 86/432 (19%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
++DQ + G + + + +I L + A+ + + M +G + + V ++ +
Sbjct: 787 LVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLC 846
Query: 116 KVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGL-----VDESLSLMQKMKEMGSFG 170
K RG + FN LN ++ G L+ + +GL +D++L+L ++M+ G
Sbjct: 847 K-RG--DTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRP 903
Query: 171 SALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVL 230
+ + Y+ ++ N G+ +L DM E + PD F++ I+++ +L E +
Sbjct: 904 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLY 963
Query: 231 QEMESQSHISMDWGTYSTVANYYIIAG-LKEKAIIYLKKCEDIVSKS--KDALGYNHLIS 287
EM +S I TYS++ N + + L E ++ E +VSK D + YN LI
Sbjct: 964 DEMVKRS-IDPSIVTYSSLINGFCMHDRLDEAKQMF----EFMVSKHCFPDVVTYNTLIK 1018
Query: 288 HYASLGNKDEMMKFW--------------------GL-QKIKCK------KQLNRD---- 316
+ +E M+ + GL Q C K++ D
Sbjct: 1019 GFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPP 1078
Query: 317 ----YITMLGSLVKIGELEEAEKMLE-----------------------------EWELS 343
Y T+L L K G+LE+A + E W+L
Sbjct: 1079 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 1138
Query: 344 CYCY------DFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADK 397
C D N ++ G+ +KG E+ADA+ KE+ + G P ++ +
Sbjct: 1139 CNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRD 1198
Query: 398 NNMEKAFECMKE 409
+ E + E +KE
Sbjct: 1199 GDREASAELIKE 1210
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 116/287 (40%), Gaps = 35/287 (12%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+N + + V++ + L ++M + G + + YN ++ + G +K + M
Sbjct: 436 YNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD 495
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G+ PD ++Y I + EL + ++M+ + + +D TY+TV G
Sbjct: 496 FFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR-EMDLDIVTYTTVIRGMCKTGKV 554
Query: 260 EKAIIYLKKCE-DIVSKSKDALGYNHLISHYASLGNKDEM------MKFWGLQKIKC--- 309
E+A C + D + Y ++S + G E+ MK GL K C
Sbjct: 555 EEAWSLF--CSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 612
Query: 310 -----------KKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLG 358
KK L+ Y L +K G ++A +L + YD+R
Sbjct: 613 DGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGK-TSYDYREK------ 665
Query: 359 YSQKGM----IEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNME 401
S+ G+ ++ A A+ E+VK P+ +S + + A N +
Sbjct: 666 LSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFD 712
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 50/271 (18%), Positives = 116/271 (42%), Gaps = 5/271 (1%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+NC+ R + +L+++ KM ++G + + + ++ Y ++ + + ++ M
Sbjct: 733 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 792
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G P+ ++ I+ ++ S ++ M ++ D TY V N G
Sbjct: 793 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG-CQPDLVTYGVVVNGLCKRGDT 851
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
+ A L K E L YN +I + D+ + + + K + Y +
Sbjct: 852 DLAFNLLNKMEQ-GKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSS 910
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
++ L G +A ++L + D + ++ + ++G + +A+ + E+VK+
Sbjct: 911 LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 970
Query: 380 KTPTPNSWSIIAAGYADKNNMEKA---FECM 407
P+ ++S + G+ + +++A FE M
Sbjct: 971 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 1001
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 109/246 (44%), Gaps = 10/246 (4%)
Query: 149 REGL----VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVP 204
R GL +D++++L +M + F S + ++ ++ + + + + M+ G+P
Sbjct: 668 RNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 727
Query: 205 PDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAII 264
++++Y I IN + RS+L VL +M + + T S++ N Y + +A+
Sbjct: 728 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGY-EPNIVTLSSLLNGYCHSKRISEAVA 786
Query: 265 YLKKCEDIVSKSKDALGYNHLISHYASLGNK-DEMMKFWGLQKIK-CKKQLNRDYITMLG 322
+ + + + + +N LI H L NK E M K C+ L Y ++
Sbjct: 787 LVDQMF-VTGYQPNTVTFNTLI-HGLFLHNKASEAMALIDRMVAKGCQPDL-VTYGVVVN 843
Query: 323 SLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTP 382
L K G+ + A +L + E + N I+ G + ++ A + KE+ KG P
Sbjct: 844 GLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRP 903
Query: 383 TPNSWS 388
++S
Sbjct: 904 NVVTYS 909
>gi|77557056|gb|ABA99852.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 726
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 92/427 (21%), Positives = 180/427 (42%), Gaps = 47/427 (11%)
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLN-DEDKVDKLYGA 142
R++HA +V + M +HD A ++ + RG+ F L + KL A
Sbjct: 122 RYRHAPEVFDEMLSLLSNTRLHDPARRVVRLMIRRGVRRGTEQFAQLMLSYSRAGKLRSA 181
Query: 143 L---------------------LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCL 181
+ +N V G VD++L ++M+ +G YN CL
Sbjct: 182 MRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMRRVGVEPDVYTYN---CL 238
Query: 182 YTNTGQHEKIPD---VLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSH 238
++ D ++ M +NG PPD SY ++ + + +LQ M + +
Sbjct: 239 IKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAG 298
Query: 239 ISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEM 298
+ D TY+ + + G ++A+ +L++ E + D +GY+ ++ + G E
Sbjct: 299 LFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRV-DEVGYSAIVHSFCLNGRMAEA 357
Query: 299 MKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNII--- 355
+ G K + Y T++ +IGEL++A KM++ Y D + PN +
Sbjct: 358 KEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHM----YKNDCK-PNTVTHT 412
Query: 356 --LLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAV 413
L G + G +A +L + ++ TP+ ++S++ G+ + ++++ + + + L
Sbjct: 413 ALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQML-- 470
Query: 414 HEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNMYHALTEAHIRSGQE 473
K + P ++ ++ L +R E + F+ + K N+ + T H S Q
Sbjct: 471 ---QKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQ- 526
Query: 474 VDGLLES 480
G LES
Sbjct: 527 --GDLES 531
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 68/354 (19%), Positives = 149/354 (42%), Gaps = 36/354 (10%)
Query: 135 KVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPD 193
+VD++ Y A+++ + G + E+ ++ +M G + Y+ ++ + G+ ++
Sbjct: 335 RVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARK 394
Query: 194 VLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYY 253
++ M +N P+ ++ +N + S +L + E +W T S +
Sbjct: 395 MMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEE------EWWTPSDITYSV 448
Query: 254 IIAGLKEKAIIYLKKCEDIVSKS------KDALGYNHLISHYASLGNKDEMMKFW-GLQK 306
++ G + + LK+ D+V + + N LI E F Q
Sbjct: 449 VMHGFRREG--KLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQS 506
Query: 307 IKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIE 366
C + ++ T++ + G+LE A ++++ LS D +++ +KG ++
Sbjct: 507 KGCTINVV-NFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLK 565
Query: 367 KADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSL 426
+A ++++++ +G PTP ++ + Y +K N+E +++ LA E +
Sbjct: 566 EATGLVEKMLNRGVLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLARQEMKSAY------ 619
Query: 427 VSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNMYHALTEAHIRSGQEVDGLLES 480
N+ VE++ AF K+ +Y L A +R Q L+ES
Sbjct: 620 ----------NQVVEKLCAFG---KLNEAYSLLYKILRTASVRDAQTCHILMES 660
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 144/311 (46%), Gaps = 10/311 (3%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV--DKLYGALLN 145
A+++ E + +G+ + + ++ L+ + K +E AE + V + +Y +N
Sbjct: 335 AMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVN 394
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
Y R G +++++ +++M+ G +++ +N ++ + + + +K + + M E GV P
Sbjct: 395 GYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTP 454
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
+Y I+ YG +L++ME + + + +Y ++ N G +A I
Sbjct: 455 SVETYNTLIDGYGKLCTFDRCFQILEQME-EIGVKPNVVSYGSLINCLCKDGKILEAEIV 513
Query: 266 LKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWG-LQKIKCKKQLNRDYITMLG 322
L+ D++ + +A YN LI +G + ++F+ + + + L Y ++
Sbjct: 514 LR---DMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTL-VTYNVLID 569
Query: 323 SLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTP 382
L K G+L EAE L + S + D N ++ GY+ G + K + + + G P
Sbjct: 570 GLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKP 629
Query: 383 TPNSWSIIAAG 393
T ++ + +G
Sbjct: 630 TVRTYHPLISG 640
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 88/453 (19%), Positives = 192/453 (42%), Gaps = 72/453 (15%)
Query: 83 KRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--Y 140
+ K ++ + M +G+ +V + V + + + + + AE F+ + + + V + Y
Sbjct: 190 QNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTY 249
Query: 141 GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKE 200
L++ Y + G +D + + ++MKE + + +N ++ + ++ +L +M+
Sbjct: 250 NTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEV 309
Query: 201 NGVPPDNFSYRI-------C-------------------INSYGARSELSSM-------- 226
NG PD ++Y I C IN+Y L+ +
Sbjct: 310 NGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEK 369
Query: 227 -ENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHL 285
E +L++ +++ + D Y+T N Y G KAI+ +++ E + +++ +N L
Sbjct: 370 AEEILKKF-TENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRP-NSITFNSL 427
Query: 286 ISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCY 345
I + + D+ ++ K Y T++ K+ + ++LE+ E
Sbjct: 428 IDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQME---- 483
Query: 346 CYDFRV-PNIILLG-----YSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNN 399
+ V PN++ G + G I +A+ VL++++ +G P ++++ G
Sbjct: 484 --EIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDG------ 535
Query: 400 MEKAFECM----KEALAVHEENKFWRPKPSLVS--SILDWLGDNRDVEEVEAFVSSLKIK 453
CM K+AL +E P+LV+ ++D L + E E F++ +
Sbjct: 536 -----SCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSS 590
Query: 454 VQKRNM--YHALTEAHIRSGQ--EVDGLLESMK 482
++ Y++L + +G + GL E+MK
Sbjct: 591 GHSPDVITYNSLISGYANAGNVSKCLGLYETMK 623
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 137/349 (39%), Gaps = 54/349 (15%)
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
LL+ + ++ E++ L + M+ G S ++ + + N Q K+ D+ ++++ +G
Sbjct: 112 LLSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIENSG 171
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG--LKE 260
D F Y I + L L M + G V Y ++ G +E
Sbjct: 172 FRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKR-------GVRPNVFIYNVLIGGLCRE 224
Query: 261 KAIIYLKKCED---IVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
K I +K D ++ + YN LI Y +G D K K K +
Sbjct: 225 KRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITF 284
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYD----------------------------- 348
++L L K+ +++EA +L+E E++ + D
Sbjct: 285 NSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATE 344
Query: 349 --FRVPN----IILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEK 402
R+ N I+L G ++G +EKA+ +LK+ + G ++ GY +M K
Sbjct: 345 KGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNK 404
Query: 403 AFECMKEALAVHEENKF-WRPKPSLVSSILDWLGDNRDVEEVEAFVSSL 450
A L + F RP +S++D D +++++ E +V +
Sbjct: 405 AI------LTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKM 447
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 60/134 (44%), Gaps = 7/134 (5%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLND----EDKVDKLYGAL 143
L + E M G+ +V + + K G+E E +N + D+V +Y A+
Sbjct: 615 CLGLYETMKNLGIKPTVRTYHPLISGCSK-EGIELVEKLYNEMLQMNLLPDRV--VYNAM 671
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
++CY G ++ SL Q M + G + YN ++ + G+ I D++ +MK +
Sbjct: 672 IHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKEL 731
Query: 204 PPDNFSYRICINSY 217
P +Y I + +
Sbjct: 732 APKADTYDILVKGH 745
>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
Length = 475
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 162/360 (45%), Gaps = 43/360 (11%)
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
+++ Y + G V + L+ +M G +AL YN ++ YT +++ ++L M+ G
Sbjct: 73 VVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEG 132
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
+ P +Y I ++ A +++ +E V +EM+S+ ++S D YS+V N Y AG +A
Sbjct: 133 IEPTVGTYTILVDGLSAARDITKVEAVFEEMKSK-NLSGDVYFYSSVINAYCRAGNVRRA 191
Query: 263 IIYLKKCEDIVSKSKDALGYNHLISHYASLGN--------KDEMMKFWGLQKIKCKKQLN 314
+C + + Y LI+ + +G D ++ G+ +I
Sbjct: 192 SEVFDECVGNGIEPNEHT-YGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIV------ 244
Query: 315 RDYITMLGSLVKIGELEEAE--KMLEE---WELSCYCYDFRVPNIILLGYSQKGMIEKAD 369
+ TM+ + +++A KM+ E EL Y Y N + G + +++A
Sbjct: 245 --FNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTY-----NTLACGLRRANRMDEAK 297
Query: 370 AVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVS- 428
+L+ +++KG P S++ + + + ++ +M +A +E E PSLV+
Sbjct: 298 NLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAE-------PSLVTY 350
Query: 429 -SILDWLGDNRDVEEVEAFVSSLKIK--VQKRNMYHALTEAHIRSGQEVD---GLLESMK 482
++D + E E F + ++ K V Y AL H +G+ VD L E MK
Sbjct: 351 NVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGK-VDVALRLFEEMK 409
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 107/250 (42%), Gaps = 4/250 (1%)
Query: 86 KHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED-KVDKL-YGAL 143
+ A +V + G G+ + H + ++ K+ +E+AE + ++++ + +
Sbjct: 189 RRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTM 248
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
++ Y R+ +VD++L + M++MG YN + C + ++ ++L M E GV
Sbjct: 249 IDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGV 308
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAI 263
P++ SY I+ + ++ + +EM TY+ + + YI G +A
Sbjct: 309 RPNHVSYTTLISIHCNEGDMVEARRLFREMAGNG-AEPSLVTYNVMMDGYIKKGSIREAE 367
Query: 264 IYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGS 323
+ + E D Y L+ + G D ++ + K + K Y ++
Sbjct: 368 RFKNEMEK-KGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISG 426
Query: 324 LVKIGELEEA 333
L K G EEA
Sbjct: 427 LAKEGRSEEA 436
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 2/124 (1%)
Query: 95 MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLY--GALLNCYVREGL 152
M+G G S+ + V +D K + AE + N + + V +Y AL++ + G
Sbjct: 338 MAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGK 397
Query: 153 VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
VD +L L ++MK+ GS + + Y ++ G+ E+ + +M +G+ PD+ Y
Sbjct: 398 VDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSA 457
Query: 213 CINS 216
+ S
Sbjct: 458 LVGS 461
>gi|15228936|ref|NP_188942.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273922|sp|Q9LS88.1|PP250_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g23020
gi|9294191|dbj|BAB02093.1| unnamed protein product [Arabidopsis thaliana]
gi|332643185|gb|AEE76706.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 842
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 155/381 (40%), Gaps = 45/381 (11%)
Query: 70 LELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNS 129
L++ + R+ + + F E + + S + + +D GK ++ A F
Sbjct: 264 LQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKR 323
Query: 130 LNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQ 187
+ +E V + +++ Y G + E SLM+ MK + YN ++ L+T
Sbjct: 324 MLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMK-LHCAPDTRTYNILISLHTKNND 382
Query: 188 HEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYS 247
E+ +MK++G+ PD SYR + ++ R + E ++ EM+ ++ +D T S
Sbjct: 383 IERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMD-DDNVEIDEYTQS 441
Query: 248 TVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDE---------- 297
+ Y+ A + EK+ + K+ V+ + + GY+ I Y G E
Sbjct: 442 ALTRMYVEAEMLEKSWSWFKRFH--VAGNMSSEGYSANIDAYGERGYLSEAERVFICCQE 499
Query: 298 -----------MMKFWGLQKIKCKKQLNR--------------DYITMLGSLVKIGELEE 332
M+K +G+ K C+K Y T++ L +
Sbjct: 500 VNKRTVIEYNVMIKAYGISK-SCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHK 558
Query: 333 AEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAA 392
LE+ + Y D ++ + + G + A+ V KE+V+ P + ++
Sbjct: 559 GRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLIN 618
Query: 393 GYADKNNMEKAF---ECMKEA 410
+AD N+++A E MKEA
Sbjct: 619 AFADTGNVQQAMSYVEAMKEA 639
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 98/205 (47%), Gaps = 8/205 (3%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTG---QHEKIPDVL 195
+YG L+N + G V +++S ++ MKE G G+++ YN ++ LYT G + E I L
Sbjct: 612 VYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKL 671
Query: 196 LDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYII 255
L PD ++ IN Y RS + E + M+ + + T++ + Y
Sbjct: 672 LQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGE--ANEFTFAMMLCMYKK 729
Query: 256 AGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR 315
G E+A K+ ++ + D L YN ++ +A G E ++ + + + Q +
Sbjct: 730 NGRFEEATQIAKQMREMKILT-DPLSYNSVLGLFALDGRFKEAVETFK-EMVSSGIQPDD 787
Query: 316 DYITMLGS-LVKIGELEEAEKMLEE 339
LG+ L+K+G ++A + +EE
Sbjct: 788 STFKSLGTILMKLGMSKKAVRKIEE 812
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 129/311 (41%), Gaps = 13/311 (4%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y A ++ Y G + E+ + +E+ + + YN ++ Y + EK ++ M
Sbjct: 474 YSANIDAYGERGYLSEAERVFICCQEVNK-RTVIEYNVMIKAYGISKSCEKACELFESMM 532
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG-L 258
GV PD +Y + + L++M ++S D Y V + ++ G L
Sbjct: 533 SYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVS-DCIPYCAVISSFVKLGQL 591
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
+Y + E + D + Y LI+ +A GN + M + K + Y
Sbjct: 592 NMAEEVYKEMVEYNIEP--DVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYN 649
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSC---YCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
+++ K+G L+EAE + + SC D N ++ YS++ M+ KA+A+ +
Sbjct: 650 SLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSM 709
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLG 435
++G+ +++++ Y E+A + K+ E K S S + +
Sbjct: 710 KQRGEA-NEFTFAMMLCMYKKNGRFEEATQIAKQM----REMKILTDPLSYNSVLGLFAL 764
Query: 436 DNRDVEEVEAF 446
D R E VE F
Sbjct: 765 DGRFKEAVETF 775
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 98/258 (37%), Gaps = 56/258 (21%)
Query: 245 TYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGL 304
TY T+ + Y GLK A+ +L K I + DE+ L
Sbjct: 224 TYGTLIDVYSKGGLKVHALCWLGKMSKIGMQP-------------------DEVTTGIVL 264
Query: 305 QKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWEL------SCYCYDFRVPNIILLG 358
Q K K E ++AE+ ++W S C N ++
Sbjct: 265 QMYK-----------------KAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDT 307
Query: 359 YSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENK 418
Y + G I++A K ++++G PT +++ + Y + + + MK + +H
Sbjct: 308 YGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMK-TMKLH---- 362
Query: 419 FWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK------IKVQKRNMYHALTEAHIRSGQ 472
P + ++ N D+E A+ +K V R + +A + H+ +
Sbjct: 363 -CAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMV--E 419
Query: 473 EVDGLLESMKADDIDEDK 490
E +GL+ M D+++ D+
Sbjct: 420 EAEGLIAEMDDDNVEIDE 437
>gi|125580078|gb|EAZ21224.1| hypothetical protein OsJ_36877 [Oryza sativa Japonica Group]
Length = 726
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 92/427 (21%), Positives = 180/427 (42%), Gaps = 47/427 (11%)
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLN-DEDKVDKLYGA 142
R++HA +V + M +HD A ++ + RG+ F L + KL A
Sbjct: 122 RYRHAPEVFDEMLSLLSNTRLHDPARRVVRLMIRRGVRRGTEQFAQLMLSYSRAGKLRSA 181
Query: 143 L---------------------LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCL 181
+ +N V G VD++L ++M+ +G YN CL
Sbjct: 182 MRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMRRVGVEPDVYTYN---CL 238
Query: 182 YTNTGQHEKIPD---VLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSH 238
++ D ++ M +NG PPD SY ++ + + +LQ M + +
Sbjct: 239 IKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAG 298
Query: 239 ISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEM 298
+ D TY+ + + G ++A+ +L++ E + D +GY+ ++ + G E
Sbjct: 299 LFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRV-DEVGYSAIVHSFCLNGRMAEA 357
Query: 299 MKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNII--- 355
+ G K + Y T++ +IGEL++A KM++ Y D + PN +
Sbjct: 358 KEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHM----YKNDCK-PNTVTHT 412
Query: 356 --LLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAV 413
L G + G +A +L + ++ TP+ ++S++ G+ + ++++ + + + L
Sbjct: 413 ALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQML-- 470
Query: 414 HEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNMYHALTEAHIRSGQE 473
K + P ++ ++ L +R E + F+ + K N+ + T H S Q
Sbjct: 471 ---QKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQ- 526
Query: 474 VDGLLES 480
G LES
Sbjct: 527 --GDLES 531
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 68/354 (19%), Positives = 149/354 (42%), Gaps = 36/354 (10%)
Query: 135 KVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPD 193
+VD++ Y A+++ + G + E+ ++ +M G + Y+ ++ + G+ ++
Sbjct: 335 RVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARK 394
Query: 194 VLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYY 253
++ M +N P+ ++ +N + S +L + E +W T S +
Sbjct: 395 MMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEE------EWWTPSDITYSV 448
Query: 254 IIAGLKEKAIIYLKKCEDIVSKS------KDALGYNHLISHYASLGNKDEMMKFW-GLQK 306
++ G + + LK+ D+V + + N LI E F Q
Sbjct: 449 VMHGFRREG--KLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQS 506
Query: 307 IKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIE 366
C + ++ T++ + G+LE A ++++ LS D +++ +KG ++
Sbjct: 507 KGCTINVV-NFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLK 565
Query: 367 KADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSL 426
+A ++++++ +G PTP ++ + Y +K N+E +++ LA E +
Sbjct: 566 EATGLVEKMLNRGVLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLARQEMKSAY------ 619
Query: 427 VSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNMYHALTEAHIRSGQEVDGLLES 480
N+ VE++ AF K+ +Y L A +R Q L+ES
Sbjct: 620 ----------NQVVEKLCAFG---KLNEAYSLLYKILRTASVRDAQTCHILMES 660
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/332 (19%), Positives = 146/332 (43%), Gaps = 4/332 (1%)
Query: 86 KHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGAL 143
KHA+++ + M +G V+ + + + K+ ++ A + + D Y L
Sbjct: 312 KHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTL 371
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
++ +E V+E+ L + + G +N ++ T H ++ +M+ G
Sbjct: 372 ISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGC 431
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAI 263
PD F+Y + I+S ++ +L N+L++ME S + TY+T+ + + A +A
Sbjct: 432 EPDEFTYNMLIDSLCSKGKLDEALNMLKQME-LSGCARSVITYNTLIDGFCKANKTREAE 490
Query: 264 IYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGS 323
+ E + S++++ YN LI ++ + ++ +K Y ++L
Sbjct: 491 EIFDEME-VHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTH 549
Query: 324 LVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPT 383
+ G++++A +++ + D ++ G + G +E A +L+ I KG T
Sbjct: 550 FCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLT 609
Query: 384 PNSWSIIAAGYADKNNMEKAFECMKEALAVHE 415
P++++ + G K +A +E L +E
Sbjct: 610 PHAYNPVIQGLFRKRKTTEAINLFREMLEQNE 641
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/324 (19%), Positives = 133/324 (41%), Gaps = 15/324 (4%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV---DKLYGALL 144
AL++ E M G ++S V + K +E A + ++++D + L+
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV 302
Query: 145 NCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVP 204
N + G V ++ +M M + G YN ++ G+ ++ +VL M
Sbjct: 303 NGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS 362
Query: 205 PDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY-YIIAG--LKEK 261
P+ +Y I++ EN ++E + + G V + +I G L
Sbjct: 363 PNTVTYNTLISTL-------CKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRN 415
Query: 262 AIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
+ ++ E++ SK D YN LI S G DE + ++ + Y T
Sbjct: 416 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNT 475
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
++ K + EAE++ +E E+ + N ++ G + +E A ++ +++ +G
Sbjct: 476 LIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG 535
Query: 380 KTPTPNSWSIIAAGYADKNNMEKA 403
+ P +++ + + +++KA
Sbjct: 536 QKPDKYTYNSLLTHFCRGGDIKKA 559
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/363 (19%), Positives = 166/363 (45%), Gaps = 22/363 (6%)
Query: 137 DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
+K + ++ Y+ EG +D +L + ++M E G S ++ N I+ + G+ E + +
Sbjct: 224 EKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQ 283
Query: 197 DMK-ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYII 255
+M ++G PD +++ +N + ++ M + + D TY++V +
Sbjct: 284 EMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGY-DPDVYTYNSVISGLCK 342
Query: 256 AGLKEKAIIYLKKCEDIVSK--SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQL 313
G ++A+ L + ++++ S + + YN LIS +L ++++ + L ++ K +
Sbjct: 343 LGEVKEAVEVL---DQMITRDCSPNTVTYNTLIS---TLCKENQVEEATELARVLTSKGI 396
Query: 314 NRDYIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADA 370
D T ++ L A ++ EE D N+++ KG +++A
Sbjct: 397 LPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALN 456
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSI 430
+LK++ G + +++ + G+ N +A E E + VH ++ +++
Sbjct: 457 MLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDE-MEVHGVSR----NSVTYNTL 511
Query: 431 LDWLGDNRDVEEVEAFVSSLKIKVQKRN--MYHALTEAHIRSG--QEVDGLLESMKADDI 486
+D L +R VE+ + + ++ QK + Y++L R G ++ ++++M ++
Sbjct: 512 IDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGC 571
Query: 487 DED 489
+ D
Sbjct: 572 EPD 574
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/371 (21%), Positives = 155/371 (41%), Gaps = 37/371 (9%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
++R L + K A++V + M + V + + ++ + G+ A + + D
Sbjct: 210 ILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRG 269
Query: 135 KVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+ Y L+N +EG +DE++ + M G + + +N I+ +TG+
Sbjct: 270 CTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAE 329
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
+L DM G P ++ I IN + L ++L++M Q + +Y+ + +
Sbjct: 330 KLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM-PQHGCQPNSLSYNPLLHG 388
Query: 253 YIIAGLKEKAIIYLKK-----C-EDIVS------------KSKDA--------------- 279
+ ++AI YL++ C DIV+ K +DA
Sbjct: 389 FCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPV 448
Query: 280 -LGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLE 338
+ YN +I A G + +K + K K Y +++G L + G+++EA K
Sbjct: 449 LITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFH 508
Query: 339 EWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKN 398
E+E + N I+LG + ++A L ++ +G P S++I+ G A +
Sbjct: 509 EFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEG 568
Query: 399 NMEKAFECMKE 409
++A E + E
Sbjct: 569 MAKEALELLNE 579
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/381 (19%), Positives = 161/381 (42%), Gaps = 49/381 (12%)
Query: 148 VREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDN 207
VR G ++E ++ M G+ + ++ + G+ K +L ++ +G PD
Sbjct: 113 VRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDV 172
Query: 208 FSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLK 267
+Y + I+ Y E+++ +VL M +S D TY+T+ +G ++A+ L
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRMS----VSPDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 268 K-----C-EDIVS----------------------------KSKDALGYNHLISHYASLG 293
+ C D+++ + D + YN L++ G
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288
Query: 294 NKDEMMKFWG-LQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVP 352
DE +KF + C+ + I +L S+ G +AEK+L + +
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNI-ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347
Query: 353 NIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
NI++ +KG++ +A +L+++ + G P S++ + G+ + M++A E ++ ++
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407
Query: 413 VHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNM--YHALTEAHIRS 470
+ P +++L L + VE+ ++ L K + Y+ + + ++
Sbjct: 408 -----RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 462
Query: 471 GQEVDG--LLESMKADDIDED 489
G+ LL+ M+A D+ D
Sbjct: 463 GKTGKAIKLLDEMRAKDLKPD 483
>gi|356534408|ref|XP_003535747.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35130-like [Glycine max]
Length = 357
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 117/286 (40%), Gaps = 59/286 (20%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLY------TNTGQHEKIPD 193
Y AL+N +VREGL +++ + ++M+E G YN +M Y + G +
Sbjct: 79 YTALVNAFVREGLCEKAEEVFEQMQEAGLEPDVYAYNALMETYKFSSPFSRAGYPYGAAE 138
Query: 194 VLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMES-------QSHISMDWGTY 246
+ M+ G PD SY I +++YG E V ++M+ +SH+ + Y
Sbjct: 139 IFSLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLQ-SAY 197
Query: 247 STVANYYIIAGLKEKAIIYLKKCEDIVSK-SKDALGYNHLISHYASLGNKDEMMKFWGLQ 305
S + N + KCE+I+++ K L N +
Sbjct: 198 SKMGN--------------VNKCEEILNQMCKSGLKLNTYV------------------- 224
Query: 306 KIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMI 365
K LN + G L + G++EE +++E+ Y D NI++ Y Q G I
Sbjct: 225 ---LKSMLN-----LYGRLGQFGKMEEVLRVMEKGS---YVADISTYNILINRYGQAGXI 273
Query: 366 EKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
E+ + + + KG P +W+ Y+ K K E +E +
Sbjct: 274 ERMEDFFQLLPSKGLKPDVVTWTSRMGAYSXKKLYLKCLEIFEETI 319
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 94/239 (39%), Gaps = 31/239 (12%)
Query: 171 SALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVL 230
SA+ YN + G +K ++ MK++ +Y + IN YG ++ S M +L
Sbjct: 5 SAVVYNAYINGLMKGGNSDKAEEIFKRMKKDACKSTTETYTMLINLYG-KAGKSFMALIL 63
Query: 231 QEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYA 290
+ + TY+ + N ++ GL EKA ++ ++ D YN L+ Y
Sbjct: 64 FHEMTTHKCKPNICTYTALVNAFVREGLCEKAEEVFEQMQE-AGLEPDVYAYNALMETYK 122
Query: 291 SLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFR 350
+G +I + M E + + Y
Sbjct: 123 FSSPFSRAGYPYGAAEI----------------------FSLMQHMGCEPDRASY----- 155
Query: 351 VPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
NI++ Y + G + A+AV K++ + G TPT S ++ + Y+ N+ K E + +
Sbjct: 156 --NILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLQSAYSKMGNVNKCEEILNQ 212
>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
Length = 1765
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/325 (20%), Positives = 141/325 (43%), Gaps = 13/325 (4%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
++Y ++++ + +++ ++++M G + +N ++ + G K L +
Sbjct: 1253 QIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLRE 1312
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
+ P+ SY I+ + R EL ++L EM + H + D T+ + + ++AG
Sbjct: 1313 AIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGH-TPDVVTFGALIHGLVVAG 1371
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD- 316
+A+I +K + D YN LIS L K + + + +K + D
Sbjct: 1372 KVSEALIVREKMTE-RQVFPDVNIYNVLIS---GLCKKRMLPAAKNILEEMLEKNVQPDE 1427
Query: 317 --YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
Y T++ ++ L +A K+ E E C D N ++ GY Q GM+ +A +
Sbjct: 1428 FVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSN 1487
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWL 434
+ K G P +++ + +GYA + N+ A + + + + +P SS+++
Sbjct: 1488 MRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMI-----KRKCKPNVVTYSSLINGY 1542
Query: 435 GDNRDVEEVEAFVSSLKIKVQKRNM 459
D + E ++++ + N+
Sbjct: 1543 CKTGDTDFAEGLFANMQAEALSPNV 1567
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 124/287 (43%), Gaps = 31/287 (10%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
Y L++ Y R G + L L+ +M+ G + + Y ++ G EKI + L+M
Sbjct: 1184 FYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEM 1243
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
++ G P+ Y I++ + +L++M + S D T++T +I GL
Sbjct: 1244 RKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFA-SGCDPDIITFNT-----LITGL 1297
Query: 259 KEKAIIYLKKCEDIVSKS------KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQ 312
+ +++K E + ++ + L Y LI + G E+M L +
Sbjct: 1298 CHEG--HVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRG---ELMVASDLLVEMMGRG 1352
Query: 313 LNRDYIT---MLGSLVKIGELEEA----EKMLEEWELSCYCYDFRVPNIILLGYSQKGMI 365
D +T ++ LV G++ EA EKM E D + N+++ G +K M+
Sbjct: 1353 HTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFP----DVNIYNVLISGLCKKRML 1408
Query: 366 EKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNM---EKAFECMKE 409
A +L+E+++K P ++ + G+ N+ K FE M+
Sbjct: 1409 PAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEH 1455
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 97/468 (20%), Positives = 196/468 (41%), Gaps = 31/468 (6%)
Query: 29 RAVKPVARNNLYSRISPLGDPDVSLTPVLDQW---VLEGQKISELELQRVIRQLRSRKRF 85
RA V+ +L R+S D+ L +D + V S ++ R++ + K++
Sbjct: 42 RASSSVSGGDLRERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKY 101
Query: 86 KHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSL----NDEDKVDKLYG 141
+ + + M G+ ++ + ++ + A + + + D+V G
Sbjct: 102 DVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVT--IG 159
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
+L+N + R V +++SL+ KM E+G + YN I+ T + D +++
Sbjct: 160 SLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK 219
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG--LK 259
G+ P+ +Y +N S S +L +M + I+ + TYS + + ++ G L+
Sbjct: 220 GIRPNVVTYTALVNGLCNSSRWSDAARLLSDM-IKKKITPNVITYSALLDAFVKNGKVLE 278
Query: 260 EKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
K + E++V S D + Y+ LI+ DE + + L K Y
Sbjct: 279 AKELF-----EEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSY 333
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
T++ K +E+ K+ E + N ++ G+ Q G ++KA ++
Sbjct: 334 NTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDF 393
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLV--SSILDWLG 435
G +P +++I+ G D +EK AL + E+ + +V ++++ +
Sbjct: 394 FGISPDIWTYNILLGGLCDNGELEK-------ALVIFEDMQKREMDLDIVTYTTVIRGMC 446
Query: 436 DNRDVEEVEAFVSSLKIKVQKRNMYHALTEAHIRSGQEVDGLLESMKA 483
VEE + SL +K K ++ +T + SG GLL ++A
Sbjct: 447 KTGKVEEAWSLFCSLSLKGLKPDI---VTYTTMMSGLCTKGLLHEVEA 491
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 112/247 (45%), Gaps = 16/247 (6%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGI---MCLYTNTGQHEKIPDVLL 196
Y ALL+ +V+ G V E+ L ++M M + Y+ + +CL+ + ++ D+
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDL-- 320
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
M G D SY IN + + + +EM + +S + TY+T+ + A
Sbjct: 321 -MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS-NTVTYNTLIQGFFQA 378
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDE-MMKFWGLQKIKCKKQLNR 315
G +KA + + D S D YN L+ G ++ ++ F +QK ++++
Sbjct: 379 GDVDKAQEFFSQ-MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQK----REMDL 433
Query: 316 D---YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
D Y T++ + K G++EEA + L D ++ G KG++ + +A+
Sbjct: 434 DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALY 493
Query: 373 KEIVKKG 379
++ ++G
Sbjct: 494 TKMKQEG 500
>gi|32488707|emb|CAE03450.1| OSJNBa0088H09.8 [Oryza sativa Japonica Group]
Length = 905
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 91/439 (20%), Positives = 179/439 (40%), Gaps = 81/439 (18%)
Query: 86 KHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVR------GLESAETYFNSLNDEDKVDK- 138
+ AL E M +GL ++ +++ + K+ +E AE + +ED +D
Sbjct: 349 RGALSCVEEMKSEGLELTIVTYSILISGFAKINDSHQSGNMERAEELVREM-EEDGIDAP 407
Query: 139 --LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
+Y ++++ Y ++ L + +++KE G S ++Y ++ LY G+ K +
Sbjct: 408 IDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISK 467
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
+M+ G+ +N +Y + IN + + ++ + +EM + +
Sbjct: 468 EMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEM--------------------LRS 507
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
GL+ I YN LI + +GN D + + + + NR
Sbjct: 508 GLQPDRAI-----------------YNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRA 550
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
+ ++ G+++ A L+ S N ++ G +K +++A +VL ++
Sbjct: 551 FRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMS 610
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFE-----------------------C-----MK 408
G TP ++++II GYA ++ KAFE C M+
Sbjct: 611 IAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQ 670
Query: 409 EALAVHEENKFWR-PKPSLVSSIL-DWLGDNRDVEEVEAFVSSLKIKVQKRNM--YHALT 464
ALAV E F + P+ + + +IL D DV E E + +K N+ Y +
Sbjct: 671 SALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYI 730
Query: 465 EAHIRSG--QEVDGLLESM 481
A ++G Q + ++E M
Sbjct: 731 NACCKAGDMQRAEKVIEEM 749
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 135/318 (42%), Gaps = 55/318 (17%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMG-------------------SFGSALN------ 174
YG LLN YV+ G V ++LS+ ++M+ G F +A
Sbjct: 446 YGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEML 505
Query: 175 ----------YNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELS 224
YN ++ + G ++ +L M++ + P N ++R I Y ++
Sbjct: 506 RSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMK 565
Query: 225 SMENVLQEMESQSHISMDWGTYSTVANY-YIIAGLKEK-----AIIYLKKCEDIVSKSKD 278
S + L M G TV Y +I GL K A+ L K I + +
Sbjct: 566 SALDTLDLMRRS-------GCVPTVMTYNALIHGLVRKHKVQRAVSVLDKM-SIAGITPN 617
Query: 279 ALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD---YITMLGSLVKIGELEEAEK 335
Y ++ YA+ G+ + +++ KIK + L D Y T+L + K G ++ A
Sbjct: 618 EHTYTIIMRGYAASGDIGKAFEYF--TKIK-ESGLKLDVYIYETLLRACCKSGRMQSALA 674
Query: 336 MLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYA 395
+ E + + NI++ G++++G + +A+ ++K++ + G P ++++
Sbjct: 675 VTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACC 734
Query: 396 DKNNMEKAFECMKEALAV 413
+M++A + ++E + V
Sbjct: 735 KAGDMQRAEKVIEEMVDV 752
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 111/256 (43%), Gaps = 11/256 (4%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I L + + + A+ V + MS G+ + H + + + + A YF + +
Sbjct: 589 LIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESG 648
Query: 135 -KVD-KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
K+D +Y LL + G + +L++ ++M + YN ++ + G +
Sbjct: 649 LKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAE 708
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
D++ MKE+GVPP+ +Y IN+ ++ E V++EM + + TY+T+
Sbjct: 709 DLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVG-LKPNVKTYTTLIKG 767
Query: 253 YIIAGLKEKAIIYLKKCED---IVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
+ L ++A+ KC + + D Y+ L++ S E + G+ + C
Sbjct: 768 WARVSLPDRAL----KCFEEMKLAGLKPDEASYHCLVTSLLSRATVMEGSTYTGIISV-C 822
Query: 310 KKQLNRDYITMLGSLV 325
++ D L + V
Sbjct: 823 REMSENDLTVDLRTAV 838
>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Glycine max]
Length = 1078
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 184/433 (42%), Gaps = 51/433 (11%)
Query: 82 RKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYF----NSLNDEDKVD 137
+ R+K A Q+ + M+ +G+ V + V +D R SA+ Y N +
Sbjct: 223 KGRYKAASQLIDCMASKGIGVDVCTYNVFID--NLCRDSRSAKGYLLLKRMRRNMVYPNE 280
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM---CLYTNTGQHEKIPDV 194
Y L++ +VREG ++ + + +M +++ YN ++ C N G+ ++ DV
Sbjct: 281 ITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDV 340
Query: 195 LLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEME----SQSHISMDWGTYSTVA 250
M +G+ P+ +Y +N +E + ++L+ M SHIS Y+ +
Sbjct: 341 ---MVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHIS-----YTAMI 392
Query: 251 NYYIIAGLKEKAIIYLKKCEDI--VSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIK 308
+ G+ E+A+ L +D+ VS + D + ++ LI+ + +G K ++I
Sbjct: 393 DGLCKNGMLEEAVQLL---DDMLKVSVNPDVVTFSVLINGFFRVG------KINNAKEIM 443
Query: 309 CKKQLNR------DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQK 362
CK Y T++ + K+G L+EA S + D N+++ + +
Sbjct: 444 CKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRY 503
Query: 363 GMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRP 422
G +E+A+ + + + G P ++ I GY + + KAF +V ++ +
Sbjct: 504 GKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAF-------SVFDKMNSFGH 556
Query: 423 KPSLVS--SILDWLGDNRDVEEVEAFVSSLKIKVQKRN--MYHALTEAHIRSGQEVD--G 476
PSL + +L L + E F L+ + +++ + RSG D
Sbjct: 557 FPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIA 616
Query: 477 LLESMKADDIDED 489
L+ M +D D
Sbjct: 617 LINEMVTNDFLPD 629
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/339 (20%), Positives = 149/339 (43%), Gaps = 12/339 (3%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+IR + A+Q M +GL SV+ + L + K + ++ ++F + +
Sbjct: 111 LIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAKG 170
Query: 135 KVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+ + LLN G + L++KM+E G + +A+ YN ++ Y G+++
Sbjct: 171 ICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAAS 230
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
++ M G+ D +Y + I++ R S+ +L + ++ + + TY+T+ +
Sbjct: 231 QLIDCMASKGIGVDVCTYNVFIDNL-CRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISG 289
Query: 253 YIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQ 312
++ G E A + + + +++ YN LI+ + + GN E ++ + +
Sbjct: 290 FVREGKIEVATKVFDE-MSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRP 348
Query: 313 LNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNI----ILLGYSQKGMIEKA 368
Y +L L K E +LE + RV +I ++ G + GM+E+A
Sbjct: 349 NEVTYGALLNGLYKNAEFGMVSSILERMRMG----GVRVSHISYTAMIDGLCKNGMLEEA 404
Query: 369 DAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECM 407
+L +++K P ++S++ G+ + A E M
Sbjct: 405 VQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIM 443
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 138/346 (39%), Gaps = 43/346 (12%)
Query: 85 FKHALQVSEWMSGQGLAFSVHDHA---VQLDLIGKVRGLESAETYFNSLN----DEDKVD 137
K AL M+ G V DH V + + LE AE + N ++ D + V
Sbjct: 471 LKEALNAYAVMNHSG---HVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVT 527
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM---CLYTNTGQHEKIPDV 194
+ ++N Y G ++ S+ KM G F S Y G++ C+ + + K
Sbjct: 528 --FDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHR 585
Query: 195 LLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYI 254
L + N V DN + + S LS ++ EM + + D TY+ +
Sbjct: 586 LRCI-PNAV--DNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLP-DNFTYTN-----L 636
Query: 255 IAGLKEK-----AIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
IAGL +K A++ K + S + Y L+ G+ + +
Sbjct: 637 IAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIF------- 689
Query: 310 KKQLNRD-------YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQK 362
++ LN+D + ++ + G+ + +L + C++ NI+L GY+++
Sbjct: 690 EEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKR 749
Query: 363 GMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMK 408
+ + + K++++ G P SW + GY + + A + ++
Sbjct: 750 HAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILR 795
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 54/291 (18%), Positives = 124/291 (42%), Gaps = 7/291 (2%)
Query: 123 AETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMC 180
A + F+ +N L YG LL G ++E+L +++ + + + +N +
Sbjct: 544 AFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLT 603
Query: 181 LYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHIS 240
+G ++ +M N PDNF+Y I + ++ + + + + +S
Sbjct: 604 STCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLS 663
Query: 241 MDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEM 298
+ Y+++ + + G +A +Y+ E++++K D + +N +I Y+ G ++
Sbjct: 664 PNPAVYTSLVDGLLKHG-HARAALYIF--EEMLNKDVEPDTVAFNVIIDQYSRKGKTSKV 720
Query: 299 MKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLG 358
K K Y +L K + + ++ + D + ++LG
Sbjct: 721 NDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILG 780
Query: 359 YSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
Y Q + A +L+ I +G +++++ + ++N M+KAFE +K+
Sbjct: 781 YCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQ 831
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 54/278 (19%), Positives = 115/278 (41%), Gaps = 5/278 (1%)
Query: 130 LNDEDKVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQH 188
LN + + D + + +++ Y R+G + ++ MK + YN ++ Y
Sbjct: 693 LNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAM 752
Query: 189 EKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYST 248
+ + DM +G PD FS+ I Y +L+ + + H+ +D T++
Sbjct: 753 ARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHV-IDRFTFNM 811
Query: 249 VANYYIIAGLKEKAIIYLKKCED-IVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKI 307
+ + +KA +K+ +V + D YN L + + + + +
Sbjct: 812 LITKFCERNEMKKAFELVKQMNQFMVIPNVDT--YNALFNGLIRTSDFHKAHRVLQVLLE 869
Query: 308 KCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEK 367
N+ YIT++ + ++G ++ A K+ +E + + I+ G + IE
Sbjct: 870 SGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIEN 929
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
A VL +++ PT +++ + Y + N+ KA E
Sbjct: 930 AIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALE 967
>gi|357124917|ref|XP_003564143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Brachypodium distachyon]
Length = 1285
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 146/360 (40%), Gaps = 54/360 (15%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMK------EMGSFGSALNYNGIM-CLYTNTGQHEK 190
+++ A++ Y R G D+ L+ M+ ++ SF + +N CL +
Sbjct: 64 QVFNAMMGVYARSGRFDDVRQLLDAMRGQELEPDLVSFNTLINARAKSGCLAPGSAF--- 120
Query: 191 IPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVA 250
D+LL++++ G+ PD +Y I++ S L V +EM + S D TY+ +
Sbjct: 121 --DLLLEVRQVGLRPDVITYNTLISACSQGSNLDDAVAVFEEMMA-SECRPDLWTYNAMV 177
Query: 251 NYY----------------IIAGLKEKAIIY----------------LKKCEDIVSKS-- 276
+ + + G K A+ Y + CE++V
Sbjct: 178 SVHGRCGKAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFK 237
Query: 277 KDALGYNHLISHYASLGNKDEMMKFWG-LQKIKCKKQLNRDYITMLGSLVKIGELEEAEK 335
KD + YN +I Y +G D + + ++ + C Y ++ SL K+ + +A K
Sbjct: 238 KDGITYNTMIHMYGKMGRLDLALGLYDEMRALGCTPD-AVTYTVLIDSLGKMDRISDAGK 296
Query: 336 MLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYA 395
+LEE + + ++ Y++ G E+A +V G P ++ ++ A
Sbjct: 297 VLEEMADAGLKPTLVTFSALICAYAKGGRREEAVRTFSHMVASGVKPDRLAYLVMLDIIA 356
Query: 396 DKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQ 455
+M K AL N +RP +L +L L + +E+EA V +++ Q
Sbjct: 357 RSGDMRKLM-----ALYQTMMNDGYRPDNALYQVMLAALAKGNEYDEIEAVVQDMEVVCQ 411
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 128/298 (42%), Gaps = 12/298 (4%)
Query: 115 GKVRGLESAETYFNSLNDED-KVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
G+ + AE F L ++ K D + Y +LL + +EG D + +++ G
Sbjct: 181 GRCGKAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFKKDG 240
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQE 232
+ YN ++ +Y G+ + + +M+ G PD +Y + I+S G +S VL+E
Sbjct: 241 ITYNTMIHMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAGKVLEE 300
Query: 233 MESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYA 290
M + + + T+S + Y G +E+A+ + +V+ D L Y ++ A
Sbjct: 301 M-ADAGLKPTLVTFSALICAYAKGGRREEAV---RTFSHMVASGVKPDRLAYLVMLDIIA 356
Query: 291 SLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFR 350
G+ ++M + + N Y ML +L K E +E E ++++ E+ C
Sbjct: 357 RSGDMRKLMALYQTMMNDGYRPDNALYQVMLAALAKGNEYDEIEAVVQDMEVVCQMNPQL 416
Query: 351 VPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMK 408
V +I++ + I + +LK+ +G P S I Y E+ ++
Sbjct: 417 VSSILI----KAECISQGAKLLKKACLQGHEPDSKSLLSILDAYETTGKHEEGLSLLQ 470
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 3/139 (2%)
Query: 121 ESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGI 178
E T N + + KL Y +LL + L +++ L ++++ G + Y+ +
Sbjct: 816 EEGFTLLNEMGKKGLTPKLESYKSLLAASGKAKLWEQAEQLFEEIRSKGYRLNRSLYHML 875
Query: 179 MCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSH 238
M +Y + H K +L MKE+G+ P + I + SYG E VL ++S S
Sbjct: 876 MKIYRDACNHSKAEQLLASMKEDGIEPTIATMHILMTSYGTAGHPDEAEKVLNSLKSSS- 934
Query: 239 ISMDWGTYSTVANYYIIAG 257
+ + YSTV N Y+ G
Sbjct: 935 LEVSTLPYSTVFNAYLKNG 953
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 66/326 (20%), Positives = 125/326 (38%), Gaps = 40/326 (12%)
Query: 115 GKVRGLESAETYFNSLNDEDKVD-KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
GK++ + AE + L E +D +++ AL++ Y GL + + ++ M E G +
Sbjct: 601 GKIKLWQHAENFVKGLKQEPSIDRRIWNALIHAYAESGLYEHARAVFDIMIEKGPLPTID 660
Query: 174 NYNGIMC-----------------------------------LYTNTGQHEKIPDVLLDM 198
+ NG+M +T G ++ + M
Sbjct: 661 SVNGMMRALIIDGRLDELYVIVQELQDMGFKISKSTVILMLDAFTKAGDIFEVMKIYNGM 720
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
KE G P+ YR I+ +E ++ EME ++ D +T+ Y G
Sbjct: 721 KEAGYLPNMHIYRSMISLLCRNKRYRDVELMVVEME-RAGFEPDLTILNTLLLMYTGNGN 779
Query: 259 KEKAI-IYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
+K + +Y E + ++D YN LI Y+ +E K Y
Sbjct: 780 FDKTVEVYHSILEAGLEPNEDT--YNTLIVMYSRNLRPEEGFTLLNEMGKKGLTPKLESY 837
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
++L + K E+AE++ EE Y + + ++++ Y KA+ +L + +
Sbjct: 838 KSLLAASGKAKLWEQAEQLFEEIRSKGYRLNRSLYHMLMKIYRDACNHSKAEQLLASMKE 897
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKA 403
G PT + I+ Y + ++A
Sbjct: 898 DGIEPTIATMHILMTSYGTAGHPDEA 923
>gi|255660936|gb|ACU25637.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 484
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 92/424 (21%), Positives = 177/424 (41%), Gaps = 35/424 (8%)
Query: 79 LRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAETYFNSLN------ 131
L K+ +HALQ W+ L + H ++++G+ L A +
Sbjct: 19 LHGSKKSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEW 78
Query: 132 DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
DED L+ +++ Y + G+V ES+ L QKM+E+G + +Y+ + + G++
Sbjct: 79 DED----LWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDVLFKVILRRGRYMMA 134
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
M G+ P ++ I I + ++ + ++M+S+ I+ D TY+T+ N
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNIMIWGFFLSGKVETANRFFEDMKSRX-ITPDVITYNTMIN 193
Query: 252 -YYIIAGLKEKAIIYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
YY + ++E +++ K +I + LI Y S+ D+ ++ K
Sbjct: 194 GYYRVKKMEEAEKYFVEMKGRNI---EPTVVTXTTLIKGYVSVDRVDDALRLXEEMKGFG 250
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL----GYSQKGMI 365
K Y T+L L ++ EA L+E Y N I L G + G +
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARSXLKEM---VDKYIAPTDNSIFLRLISGQCKAGNL 307
Query: 366 EKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPS 425
+ A VL+ +++ + ++ Y +KA + + + E++ RP+ +
Sbjct: 308 DAAADVLQAMIRLSVPTEAGHYGVLIENYCKAGQYDKAINLLDKLI---EKDIILRPQST 364
Query: 426 L------VSSILDWLGDNRDVEEVEAFVSSL-KIKVQKRNMYHALTEAHIRSGQEVDGLL 478
L + ++++L +N + E V L K+ VQ + L H + G D
Sbjct: 365 LHMEXIAYNPLIEYLCNNGRTAKAETLVRQLMKLGVQDSIALNTLILGHSQEGSP-DSAF 423
Query: 479 ESMK 482
E +K
Sbjct: 424 ELLK 427
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 133/330 (40%), Gaps = 54/330 (16%)
Query: 116 KVRGLESAETYFNSL---NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
+V+ +E AE YF + N E V L+ YV VD++L L ++MK G +A
Sbjct: 197 RVKKMEEAEKYFVEMKGRNIEPTVVTX-TTLIKGYVSVDRVDDALRLXEEMKGFGIKPNA 255
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP-DNFSYRICINSYGARSELSSMENVLQ 231
+ Y+ ++ N + + L +M + + P DN + I+ L + +VLQ
Sbjct: 256 ITYSTLLPGLCNAEKMSEARSXLKEMVDKYIAPTDNSIFLRLISGQCKAGNLDAAADVLQ 315
Query: 232 EMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC--EDIVSKSKDAL-----GYNH 284
M S + + G Y + Y AG +KAI L K +DI+ + + L YN
Sbjct: 316 AMIRLS-VPTEAGHYGVLIENYCKAGQYDKAINLLDKLIEKDIILRPQSTLHMEXIAYNP 374
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSC 344
LI + C T++ L+K+G
Sbjct: 375 LIEYL-------------------CNNGRTAKAETLVRQLMKLG---------------- 399
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
D N ++LG+SQ+G + A +LK ++++ +++ + Y KN A
Sbjct: 400 -VQDSIALNTLILGHSQEGSPDSAFELLKIMLRRKIDSAKSAYDSLVQSYLKKNEPADA- 457
Query: 405 ECMKEALAVHEENKFWRPKPSLVSSILDWL 434
K AL EN P SL S+++ L
Sbjct: 458 ---KAALDSMIENGHL-PDSSLFRSVMESL 483
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/354 (20%), Positives = 153/354 (43%), Gaps = 14/354 (3%)
Query: 66 KISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAET 125
+++ + L VIR + + A ++ E M +G VH +++ + + K+ SA
Sbjct: 310 EVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVR 369
Query: 126 YFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYT 183
+ + ++ + Y LL+ + R G+ D++ +++ +M G ++ YNGI+
Sbjct: 370 MLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALC 429
Query: 184 NTGQHEKIPDVLLDMKENGVPPD-----NFSYRICINSYGARSELSSMENVLQEMESQSH 238
G+ ++ ++ +MK G PD Y +C N +E N+++E +
Sbjct: 430 KDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAE-HIFRNLIEEGVVANG 488
Query: 239 ISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEM 298
I+ + ++ + N GL+ + + L C+ D + YN LI GN D
Sbjct: 489 ITYNTLIHALLRNGRWQEGLRLASEMLLHGCQ------LDVISYNGLIKALCKEGNVDRS 542
Query: 299 MKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLG 358
M K K N Y ++ L K G++ +A ++ +E D N ++ G
Sbjct: 543 MALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLING 602
Query: 359 YSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
+ G A +L+++ + P +++I+ + + ++ A + +A++
Sbjct: 603 LCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAIS 656
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 104/234 (44%), Gaps = 4/234 (1%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
+LDQ + +G ++ +I L + A ++ + M QG + + + +
Sbjct: 405 MLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLC 464
Query: 116 KVRGLESAETYFNSLNDEDKVDK--LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
+E AE F +L +E V Y L++ +R G E L L +M G +
Sbjct: 465 NNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVI 524
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
+YNG++ G ++ +L +M G+ P+NFSY + IN ++ + +EM
Sbjct: 525 SYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEM 584
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLIS 287
+Q ++ D TY+T+ N G A+ L+K + + D + YN LIS
Sbjct: 585 LNQG-LTPDIVTYNTLINGLCKVGWTHAALNLLEKLPN-ENVHPDIVTYNILIS 636
>gi|255540825|ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550592|gb|EEF52079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 754
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/356 (20%), Positives = 147/356 (41%), Gaps = 41/356 (11%)
Query: 95 MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGL 152
M+ G+ + + ++ GK+ LE + + + Y LL Y +G
Sbjct: 274 MNEGGMVPDITTYRNLVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAYASKGD 333
Query: 153 VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
+ ++ + ++M+E +A+ Y+ ++ LY G+++ + ++ L+MK + PD +Y +
Sbjct: 334 IRHAMGVFRQMQEARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNV 393
Query: 213 CINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA--IIYLKKCE 270
I +G + + +M + ++ + GTY + GL E A I+ +
Sbjct: 394 LIEVFGEGGYFKEVVTLFHDM-VEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHMDEK 452
Query: 271 DIVSKSKDALG--------------------------------YNHLISHYASLG-NKDE 297
IV +K G YN LI+ +A G K+
Sbjct: 453 GIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMFARGGLYKES 512
Query: 298 MMKFWGLQKIKCKKQLNRD-YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIIL 356
W + + + +RD + ++ + G+ EEA K E E + + D R +L
Sbjct: 513 EAIMWKMGESGVAR--DRDSFNGVIEGYRQGGQFEEAIKTYVELEKARFQPDERTFEAVL 570
Query: 357 LGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
Y G++++++ +EI G P+ + ++ A YA N + A+E + E +
Sbjct: 571 SVYCTAGLVDESEEQFREIRASGILPSVMCYCMMIAVYARSNRWDDAYEVLDEMVT 626
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 87/452 (19%), Positives = 187/452 (41%), Gaps = 56/452 (12%)
Query: 66 KISELELQRVIRQLRSRKRFKHALQVSEWMSGQ-GLAFSVHDHAVQLDLIGKVRGLESAE 124
K+S + V ++ R ++ +L++ ++M Q + H + + + L+G+ LE +
Sbjct: 103 KLSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKST 162
Query: 125 TYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYN------ 176
F + + Y AL+N Y R G + SL L+++MK+ S L YN
Sbjct: 163 EIFEEMPTHGVPRSVFSYTALINSYGRHGQYEVSLELLERMKKEKVTPSILTYNTVINSC 222
Query: 177 --------GIMCLYTNTGQHEKI-PDVLL----------------------DMKENGVPP 205
G++ L+ +HE I PD++ M E G+ P
Sbjct: 223 ARGGLNWEGLLSLFAEM-RHEGIQPDIITYNTLLNACANRGLGDEAEMVFRTMNEGGMVP 281
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
D +YR + ++G ++L + +L+EMES ++ D +Y+ + Y G A+
Sbjct: 282 DITTYRNLVETFGKLNKLEKVSELLKEMESSGNLP-DISSYNVLLEAYASKGDIRHAMGV 340
Query: 266 LKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLV 325
++ ++ +A+ Y+ L++ Y G D++ + + K+ + Y ++
Sbjct: 341 FRQMQE-ARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVFG 399
Query: 326 KIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPN 385
+ G +E + + + ++ + G+ E A +L + +KG P+
Sbjct: 400 EGGYFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHMDEKGIVPSTK 459
Query: 386 SWSIIAAGYADKNNMEKA---FECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEE 442
+++ + Y + E+A F M E + +P +S+++ +E
Sbjct: 460 AYTGVIEAYGQAASYEEALVMFNTMNEMGS--------KPTVETYNSLINMFARGGLYKE 511
Query: 443 VEAFVSSLKIK--VQKRNMYHALTEAHIRSGQ 472
EA + + + R+ ++ + E + + GQ
Sbjct: 512 SEAIMWKMGESGVARDRDSFNGVIEGYRQGGQ 543
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 135/380 (35%), Gaps = 85/380 (22%)
Query: 81 SRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSL---NDEDKVD 137
S+ +HA+ V M + +++ L+L G + F + N E V
Sbjct: 330 SKGDIRHAMGVFRQMQEARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVG 389
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
Y L+ + G E ++L M E + Y G++ G HE +LL
Sbjct: 390 T-YNVLIEVFGEGGYFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKILLH 448
Query: 198 MKENGVPPDNFSYRICINSYGARS---ELSSMENVLQEMESQSHISMDWGTYSTVANYYI 254
M E G+ P +Y I +YG + E M N + EM S+ + TY+++ N +
Sbjct: 449 MDEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVE----TYNSLINMFA 504
Query: 255 IAGL-KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMK------------- 300
GL KE I K E V++ +D+ +N +I Y G +E +K
Sbjct: 505 RGGLYKESEAIMWKMGESGVARDRDS--FNGVIEGYRQGGQFEEAIKTYVELEKARFQPD 562
Query: 301 ---FWGLQKIKCKKQLNRD-------------------YITMLGSLVKIGELEEAEKMLE 338
F + + C L + Y M+ + ++A ++L+
Sbjct: 563 ERTFEAVLSVYCTAGLVDESEEQFREIRASGILPSVMCYCMMIAVYARSNRWDDAYEVLD 622
Query: 339 E--------------------------WELSCYCYD----------FRVPNIILLGYSQK 362
E W++ Y +D R N +L
Sbjct: 623 EMVTNKVSNIHQVVGKMMKGDYDDYSNWQMVEYVFDKLNSEGCGLGMRFYNTLLEALWWL 682
Query: 363 GMIEKADAVLKEIVKKGKTP 382
G E+A VL E +K+G P
Sbjct: 683 GQKERAARVLSEAIKRGLFP 702
>gi|297835316|ref|XP_002885540.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331380|gb|EFH61799.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 841
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 154/381 (40%), Gaps = 45/381 (11%)
Query: 70 LELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNS 129
L++ + R+ + + F E + + S + + +D GK ++ A F
Sbjct: 263 LQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKR 322
Query: 130 LNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQ 187
+ +E V + +++ Y G E SLM+ MK YN ++ L+T
Sbjct: 323 MLEEGIVPTTVTFNTMIHVYGNNGQFGEVTSLMKTMK-FHCAPDTRTYNILISLHTKNND 381
Query: 188 HEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYS 247
E+ +MK G+ PD SYR + ++ R + E ++ EM+ + + +D T S
Sbjct: 382 IERAGTYFKEMKGAGLKPDPVSYRTLLYAFSIRHMVKEAEELIAEMD-DNDVEIDEYTQS 440
Query: 248 TVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDE---------- 297
+ YI A + EK+ + K+ V+ + + GY+ I Y G E
Sbjct: 441 ALTRMYIEAEMLEKSWSWFKRFH--VAGNMSSEGYSANIDAYGERGYLSEAERVFICCQE 498
Query: 298 -----------MMKFWGLQKIKCKKQLNR--------------DYITMLGSLVKIGELEE 332
M+K +G+ K C+K Y T++ L ++
Sbjct: 499 VNKRTVLEYNVMIKAYGISK-SCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPDK 557
Query: 333 AEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAA 392
A+ LE+ + Y D ++ + + G + A+ V KE+V+ P + ++
Sbjct: 558 AKCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLIN 617
Query: 393 GYADKNNMEKAF---ECMKEA 410
+AD N+++A E MKEA
Sbjct: 618 AFADTGNVQQAMSYVEAMKEA 638
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 126/296 (42%), Gaps = 20/296 (6%)
Query: 103 SVHDHAVQLDLIGKVRGLESAETYFNSLND----EDKVDKLYGALLNCYVREGLVDESLS 158
+V ++ V + G + E A F S+ DK Y L+ + D++
Sbjct: 503 TVLEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCT--YNTLVQILASADMPDKAKC 560
Query: 159 LMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYG 218
++KM+E G + Y ++ + GQ +V +M E + PD Y + IN++
Sbjct: 561 YLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFA 620
Query: 219 ARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG-LKEKAIIY---LKKCEDIVS 274
+ + ++ M+ ++ I + Y+++ Y G L E IY L+ C + +
Sbjct: 621 DTGNVQQAMSYVEAMK-EAGIPENSVIYNSLIKLYTKVGYLDEAEAIYRKLLRSCNE--T 677
Query: 275 KSKDALGYNHLISHYA--SLGNKDEMMKFWGLQKIKCKKQLNR-DYITMLGSLVKIGELE 331
+ D N +I+ Y+ S+ K E + + +K +++ N + ML K G E
Sbjct: 678 QYPDVYTSNCMINLYSQRSMVRKAEAI----FESMKQRREANEFTFAMMLCMYKKNGRFE 733
Query: 332 EAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSW 387
EA ++ ++ D N +L Y+ G ++A KE+V G P +++
Sbjct: 734 EATQIAKQMREMRILTDPLSYNSVLGLYALDGRFKEAVETFKEMVSSGIQPDDSTF 789
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Query: 104 VHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNC-YVREGLVDESLSLMQK 162
V+ ++L + + AE F S+ + ++ A++ C Y + G +E+ + ++
Sbjct: 682 VYTSNCMINLYSQRSMVRKAEAIFESMKQRREANEFTFAMMLCMYKKNGRFEEATQIAKQ 741
Query: 163 MKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYR 211
M+EM L+YN ++ LY G+ ++ + +M +G+ PD+ +++
Sbjct: 742 MREMRILTDPLSYNSVLGLYALDGRFKEAVETFKEMVSSGIQPDDSTFK 790
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 97/480 (20%), Positives = 183/480 (38%), Gaps = 72/480 (15%)
Query: 46 LGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVH 105
+G P L P V+ QK ++ + +R FKH L S +
Sbjct: 1 MGPP---LLPKHVTTVIRCQK-DPMKALEMFNSMRKEDGFKHTL-------------STY 43
Query: 106 DHAVQ-LDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMK 164
++ L L GK +E ++ +Y + Y R+G V E++++ ++M
Sbjct: 44 RSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMD 103
Query: 165 EMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELS 224
+ +YN IM + ++G ++ V + M++ G+ PD +S+ I + S+ S
Sbjct: 104 FYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPH 163
Query: 225 SMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA---------------------I 263
+ +L M SQ M+ Y TV + K++ +
Sbjct: 164 AALRLLNNMSSQG-CEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKL 222
Query: 264 IY-------LKKCEDIVSKS------KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCK 310
++ +K+CE ++ K + YN I G D ++ G +
Sbjct: 223 LHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGP 282
Query: 311 KQLNRDYITMLGSLVKIGELEEAEKML-----EEWELSCYCYDFRVPNIILLGYSQKGMI 365
K Y ++ L K + +EAE L E E + Y N ++ GY + GM+
Sbjct: 283 KPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTY-----NTLIAGYCKGGMV 337
Query: 366 EKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPS 425
+ A+ +L V G P ++ + G + +A EAL K +P
Sbjct: 338 QLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALG-----KGIKPNVI 392
Query: 426 LVSSILDWLGDNRDVEEVEAFVSSLKIK--VQKRNMYHALTEAHIRSG--QEVDGLLESM 481
L ++++ L + + E S + K + + ++ L + G + DGL++ M
Sbjct: 393 LYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM 452
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 147/360 (40%), Gaps = 23/360 (6%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ LL+ ++G V E L+ K+ + G + YN + G+ + ++ +
Sbjct: 219 FNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLI 278
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ G PD +Y I S+ E L ++ ++ + D TY+T+ Y G+
Sbjct: 279 DQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEG-LEPDSFTYNTLIAGYCKGGMV 337
Query: 260 EKAIIYLKKCEDIVSKS------KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQL 313
+ A E I+ + D Y LI G + + + K K
Sbjct: 338 QLA-------ERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPN 390
Query: 314 NRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
Y T++ L G + EA ++ E + + NI++ G + G + AD ++K
Sbjct: 391 VILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVK 450
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDW 433
++ KG P +++I+ GY+ + ME A E L V +N P +S+L+
Sbjct: 451 VMISKGYFPDIFTFNILIHGYSTQLKMENAL----EILDVMMDNG-VDPDVYTYNSLLNG 505
Query: 434 LGDNRDVEEVEAFVSSLKIKVQKRNM--YHALTEAHIRSGQ--EVDGLLESMKADDIDED 489
L E+V ++ K N+ ++ L E+ R + + GLLE MK ++ D
Sbjct: 506 LCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPD 565
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 146/336 (43%), Gaps = 45/336 (13%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
LY L+ +GL+ E+ L +M E G +N ++ G ++ M
Sbjct: 393 LYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM 452
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY-YIIAG 257
G PD F++ I I+ Y + + MEN L+ ++ + MD G V Y ++ G
Sbjct: 453 ISKGYFPDIFTFNILIHGYSTQLK---MENALEILD----VMMDNGVDPDVYTYNSLLNG 505
Query: 258 LKEKAIIYLKKCEDIVSKSK---------DALGYNHLISHYASLGNKDEMMKFWGLQKIK 308
L + + K ED++ K + +N L+ SL ++ K GL +
Sbjct: 506 LCKTS-----KYEDVMETYKTMVEKGCAPNLFTFNILLE---SLCRYHKLDKALGLLEEM 557
Query: 309 CKKQLNRDYITMLGSLV----KIGELEEA----EKMLEEWELSCYCYDFRVPNIILLGYS 360
K +N D +T G+L+ K G+L+ A KM E + +SC + NII+ ++
Sbjct: 558 KNKSVNPDAVT-FGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTY---NIIIHAFT 613
Query: 361 QKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFW 420
+K + A+ + +E+V + P ++ ++ G+ N++ ++ + E + EN F
Sbjct: 614 EKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMM----ENGFI 669
Query: 421 RPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQK 456
P + + +++ L V E + + VQK
Sbjct: 670 -PSLTTLGRVINCLCVEDRVYEAAGIIHRM---VQK 701
>gi|28393724|gb|AAO42273.1| unknown protein [Arabidopsis thaliana]
Length = 642
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 108/510 (21%), Positives = 191/510 (37%), Gaps = 94/510 (18%)
Query: 23 IFTRAYRAVKPVARNNLYSRISP---------LGDPDVSLTPVLDQWVLEGQKI--SELE 71
++ YR ++ V RN Y +SP LG + + + +G+K +
Sbjct: 141 LYGEMYRTIQEVVRNT-YVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSST 199
Query: 72 LQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGL---ESAETYFN 128
VI L + + +V M +G F D LI L +SA F+
Sbjct: 200 YNSVILMLMQEGQHEKVHEVYTEMCNEGDCFP--DTITYSALISSYEKLGRNDSAIRLFD 257
Query: 129 SLNDE--DKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTG 186
+ D +K+Y LL Y + G V+++L L ++MK G + Y ++ G
Sbjct: 258 EMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAG 317
Query: 187 QHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM------------- 233
+ ++ DM +G+ PD +N G + + NV EM
Sbjct: 318 RVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYN 377
Query: 234 -------ESQSHIS--MDWG-------------TYSTVANYYIIAGLKEKAIIYLKK--- 268
ES++H+S W TYS + + Y EKA++ L++
Sbjct: 378 TVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDE 437
Query: 269 -----CEDIVSKSKDALG--------------------------YNHLISHYASLGNKDE 297
C +ALG Y +I H+ G E
Sbjct: 438 KGFPPCPAAYCSLINALGKAKRYEAADELFKELKENFGNVSSRVYAVMIKHFGKCGKLSE 497
Query: 298 MMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL 357
+ + K + Y ++ +VK G + EA +L + E + D NIIL
Sbjct: 498 AVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILN 557
Query: 358 GYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEEN 417
G+++ G+ +A + + I G P +++ + +A E+A M+E ++
Sbjct: 558 GFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREM-----KD 612
Query: 418 KFWRPKPSLVSSILDWLGD-NRDVEEVEAF 446
K + SSILD +G+ + + ++V +F
Sbjct: 613 KGFEYDAITYSSILDAVGNVDHEKDDVSSF 642
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 82/177 (46%), Gaps = 10/177 (5%)
Query: 278 DALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKML 337
D + Y+ LIS Y LG D ++ + K C + + Y T+LG K+G++E+A +
Sbjct: 232 DTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLF 291
Query: 338 EEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADK 397
EE + + ++ G + G +++A K++++ G TP +
Sbjct: 292 EEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPD-------VVFLNNL 344
Query: 398 NNMEKAFECMKEALAVHEENKFWRPKPSLVS--SILDWLGDNR-DVEEVEAFVSSLK 451
N+ ++E V E WR P++VS +++ L +++ V EV ++ +K
Sbjct: 345 MNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMK 401
>gi|15233259|ref|NP_188222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274469|sp|Q9LW84.1|PP236_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16010
gi|9294448|dbj|BAB02667.1| unnamed protein product [Arabidopsis thaliana]
gi|332642241|gb|AEE75762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 642
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 108/510 (21%), Positives = 191/510 (37%), Gaps = 94/510 (18%)
Query: 23 IFTRAYRAVKPVARNNLYSRISP---------LGDPDVSLTPVLDQWVLEGQKI--SELE 71
++ YR ++ V RN Y +SP LG + + + +G+K +
Sbjct: 141 LYGEMYRTIQEVVRNT-YVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSST 199
Query: 72 LQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGL---ESAETYFN 128
VI L + + +V M +G F D LI L +SA F+
Sbjct: 200 YNSVILMLMQEGQHEKVHEVYTEMCNEGDCFP--DTITYSALISSYEKLGRNDSAIRLFD 257
Query: 129 SLNDE--DKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTG 186
+ D +K+Y LL Y + G V+++L L ++MK G + Y ++ G
Sbjct: 258 EMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAG 317
Query: 187 QHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM------------- 233
+ ++ DM +G+ PD +N G + + NV EM
Sbjct: 318 RVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYN 377
Query: 234 -------ESQSHIS--MDWG-------------TYSTVANYYIIAGLKEKAIIYLKK--- 268
ES++H+S W TYS + + Y EKA++ L++
Sbjct: 378 TVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDE 437
Query: 269 -----CEDIVSKSKDALG--------------------------YNHLISHYASLGNKDE 297
C +ALG Y +I H+ G E
Sbjct: 438 KGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSE 497
Query: 298 MMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL 357
+ + K + Y ++ +VK G + EA +L + E + D NIIL
Sbjct: 498 AVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILN 557
Query: 358 GYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEEN 417
G+++ G+ +A + + I G P +++ + +A E+A M+E ++
Sbjct: 558 GFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREM-----KD 612
Query: 418 KFWRPKPSLVSSILDWLGD-NRDVEEVEAF 446
K + SSILD +G+ + + ++V +F
Sbjct: 613 KGFEYDAITYSSILDAVGNVDHEKDDVSSF 642
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 82/177 (46%), Gaps = 10/177 (5%)
Query: 278 DALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKML 337
D + Y+ LIS Y LG D ++ + K C + + Y T+LG K+G++E+A +
Sbjct: 232 DTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLF 291
Query: 338 EEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADK 397
EE + + ++ G + G +++A K++++ G TP +
Sbjct: 292 EEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPD-------VVFLNNL 344
Query: 398 NNMEKAFECMKEALAVHEENKFWRPKPSLVS--SILDWLGDNR-DVEEVEAFVSSLK 451
N+ ++E V E WR P++VS +++ L +++ V EV ++ +K
Sbjct: 345 MNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMK 401
>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Glycine max]
Length = 836
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 152/348 (43%), Gaps = 21/348 (6%)
Query: 75 VIRQLRSRKRFKHALQ-VSEWMSGQGLAFSVHDHAVQLDLIG--KVRG-LESAETYFN-- 128
VI +L R F AL+ V++ +SG V D + ++G K G E+ E +F
Sbjct: 436 VIHRLMERSGFVSALKIVTKLLSGN---IRVSDSLLTPLVVGLCKCEGHSEAIELWFKLA 492
Query: 129 SLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQH 188
++ ALL+ G ++E ++++M E G ++YN ++ G+
Sbjct: 493 AVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKI 552
Query: 189 EKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYST 248
E+ + +M + PD ++Y + ++ + +L E + + + TY+
Sbjct: 553 EEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVY-TYAL 611
Query: 249 VANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIK 308
+ Y A E A+ + K D ++ YN LI+ Y +GN E K K +
Sbjct: 612 LLEGYCKADRIEDAVKFFKNL-DYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSR 670
Query: 309 CKKQLNRDYITMLGSLVKIGELEEAEKMLEEWE-----LSCYCYDFRVPNIILLGYSQKG 363
Y +++ + IG ++EA+++ EE + +CY ++ G+ + G
Sbjct: 671 GILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCY-----TALIGGHCKLG 725
Query: 364 MIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
++ ++L E+ G P +++I+ GY NM++A E + E +
Sbjct: 726 QMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMI 773
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +L++ G VDE+ + ++M+ G + Y ++ + GQ + + +LL+M
Sbjct: 679 YSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMS 738
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYY 253
NG+ P+ +Y I I+ Y + +L EM ++ I+ D TY+ + Y
Sbjct: 739 SNGIRPNKITYTIMIDGYCKLGNMKEARELLNEM-IRNGIAPDTVTYNALQKGY 791
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 98/214 (45%), Gaps = 9/214 (4%)
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
D+ + + GV P + + ++S +EL V ++ Q ++ D T++T N
Sbjct: 207 DIFVMFSKRGVFPCLKTCNLLLSSLVKANELHKSYEVF-DLACQG-VAPDVFTFTTAINA 264
Query: 253 YIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQ 312
+ G A+ K E + + + YN++I G +E ++F + + +
Sbjct: 265 FCKGGRVGDAVDLFCKMEGL-GVFPNVVTYNNVIDGLFKSGRFEEALRF---KDRMVRSK 320
Query: 313 LNRDYIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKAD 369
+N +T ++ L+K+ EEA ++L E + + V N ++ GY +KG + +A
Sbjct: 321 VNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEAL 380
Query: 370 AVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
V E+ KG P +++ + G+ N ME+A
Sbjct: 381 RVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQA 414
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 59/304 (19%), Positives = 123/304 (40%), Gaps = 36/304 (11%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
YG L++ ++ + +E+ ++ +M MG + + +N ++ Y G + V +M
Sbjct: 328 YGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMA 387
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS-HISMDWGTYST---------- 248
G+ P+ ++ + + +++ E VL + S ++MD +Y
Sbjct: 388 MKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFV 447
Query: 249 ----------VANYYIIAGLKEKAIIYLKKCED-------------IVSKSKDALGYNHL 285
N + L ++ L KCE + + + + N L
Sbjct: 448 SALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNAL 507
Query: 286 ISHYASLGNKDEMMKFWGLQKIKCKKQLNR-DYITMLGSLVKIGELEEAEKMLEEWELSC 344
+ GN +E+ + Q ++ L+R Y T++ K G++EEA K+ EE
Sbjct: 508 LHGLCERGNMEEVFEVLK-QMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQE 566
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
+ D N ++ G + G I+ +L E + G P +++++ GY + +E A
Sbjct: 567 FQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAV 626
Query: 405 ECMK 408
+ K
Sbjct: 627 KFFK 630
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 96/468 (20%), Positives = 190/468 (40%), Gaps = 46/468 (9%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
+L++ V G + V+ R ++AL + E M +G V + ++ +
Sbjct: 252 LLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLC 311
Query: 116 KVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
K+ ++ A + + + YG L++ + R G +D ++ L++KM E G +A+
Sbjct: 312 KLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAI 371
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSY---------------- 217
YN IM ++ E+ VL M + G PPD +Y I+ +
Sbjct: 372 TYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQM 431
Query: 218 ---GARSELSSMENVL------------QEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
G R +++ + ++ QE+ S I MD + I A K K
Sbjct: 432 IRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMS-IGMDCAPDVVAYSILIHALCKAKR 490
Query: 263 IIYLKKCEDIVSKSK---DALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
+ + D++ K++ D + YN ++ ++ + + Y
Sbjct: 491 LPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSI 550
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
++ S K L+ A KMLE + + D + ++ G + G ++KA V +E++ G
Sbjct: 551 VIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCG 610
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRD 439
P +++ + G N +E+A E M E + + P + +++ L +
Sbjct: 611 CAPNLVTYNTLIDGLCKINKVEQAAE-MLEIM----RKQSCTPDSITYTCLINGLCNASR 665
Query: 440 VEEVEAFVSSLKIK--VQKRNMYHALTEAHIRSG--QEVDGLLESMKA 483
+EE + +K K + R Y L A ++ + V+ LL+ M+A
Sbjct: 666 LEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEA 713
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 104/219 (47%), Gaps = 13/219 (5%)
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
++L +M +GVP + + + I + +L S + +EME D TYST+ +
Sbjct: 898 ELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDS 957
Query: 253 YIIAGLKEKAIIYLKKCEDIVSK--SKDALGYNHLISHYASLGNKDEMMKFWGLQKIK-- 308
+ +G + A + ED+VSK S + + Y+ L+ G DE LQ++
Sbjct: 958 LVKSGKVDDAC---RLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATAL--LQRMTRS 1012
Query: 309 -CKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL-GYSQKGMIE 366
C + Y T++ K+G ++EA +LEE + C V +LL + + G E
Sbjct: 1013 GCSPNI-VTYNTIIDGHCKLGRIDEAYHLLEEM-VDGGCQPNVVTYTVLLDAFCKCGKAE 1070
Query: 367 KADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
A +++ +V+KG P +++ + + K+ +E+A +
Sbjct: 1071 DAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQ 1109
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 138/365 (37%), Gaps = 45/365 (12%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
VL + G + +I + + A + E M +G V + +D +
Sbjct: 392 VLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALC 451
Query: 116 KVRGLESAETYFN-SLNDEDKVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
K ++SA+ S+ + D + Y L++ + + E+ S + M + + +
Sbjct: 452 KAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVV 511
Query: 174 NYNGIMCLYTNTGQHEKIPDVLL---DMKENGVPPDNFSYRICINSYGARSELSSMENVL 230
YN ++ + +I D L M+ GV PD +Y I I+S+ + L S +L
Sbjct: 512 TYNSVV---DGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKML 568
Query: 231 QEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYA 290
+ M+ + D TYS + N AG +KA D+
Sbjct: 569 ERMKEAKCVP-DVVTYSALINGLCKAGTVDKAF-------DV------------------ 602
Query: 291 SLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFR 350
F + C L Y T++ L KI ++E+A +MLE D
Sbjct: 603 ----------FQEMLGCGCAPNL-VTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSI 651
Query: 351 VPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEA 410
++ G +E+A VL+E+ KG P ++ + NN+E + +KE
Sbjct: 652 TYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEM 711
Query: 411 LAVHE 415
A E
Sbjct: 712 EATEE 716
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/301 (20%), Positives = 134/301 (44%), Gaps = 18/301 (5%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y LL+ + + G ++++ L++ M E G + YN ++ ++ + E+ +L M
Sbjct: 1056 YTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMI 1115
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ G P+ SY I +++ +L++M S + + D T++T+ I A K
Sbjct: 1116 QKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVP-DIVTFNTI----IDAMCK 1170
Query: 260 EKAIIYLKKCEDIVSKS---KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
+ + +++ +S + + YN L+ D+ + L+++ K+ + D
Sbjct: 1171 TYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAE--YLLREMTRKQGCSPD 1228
Query: 317 YIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
IT ++ L K ++ A K+ + D +I++ + +++A+ VL+
Sbjct: 1229 IITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLE 1288
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDW 433
++K G P ++ + G+ N++KA E ++ L+ K P S +DW
Sbjct: 1289 LMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLS-----KGSYPDVVTFSIFIDW 1343
Query: 434 L 434
L
Sbjct: 1344 L 1344
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 58/306 (18%), Positives = 131/306 (42%), Gaps = 13/306 (4%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ++N + +D+++ L+++M + G + +YN ++ + + E +L M
Sbjct: 233 YNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMV 292
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G PPD SY IN ++ V+ +M Q + TY T+ + + G
Sbjct: 293 TRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKM-IQRGCQPNVITYGTLVDGFCRVGDL 351
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD--- 316
+ A+ ++K + +A+ YN+++ + +++M + + ++ + D
Sbjct: 352 DGAVELVRKMTE-RGYRPNAITYNNIMHVFC---RRNDMERAHQVLQMMIQTGCPPDAIN 407
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y T++ K G+L EA +LE+ D + ++ + I+ A +L+ +
Sbjct: 408 YSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSI 467
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGD 436
P ++SI+ + +A + L V +N+ + P +S++D L
Sbjct: 468 GMDCAPDVVAYSILIHALCKAKRLPEA----ESWLDVMVKNRCY-PDVVTYNSVVDGLCK 522
Query: 437 NRDVEE 442
+R + +
Sbjct: 523 SRRIND 528
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 147/337 (43%), Gaps = 17/337 (5%)
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YG 141
R A + E M G +V + V LD K E A + ++ V L Y
Sbjct: 1033 RIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYN 1092
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMC-LYTNTGQHEKIPDVLLDMKE 200
+LL+ + ++ V+ + L+ M + G + ++YN ++ L T HE + +L M
Sbjct: 1093 SLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVL-LLEQMLS 1151
Query: 201 NGVPPDNFSYRICINSYGA--RSELS-SMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
N PD ++ I++ R +++ + N++QE S + + TY+++ + +
Sbjct: 1152 NNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQE----SGCTPNLVTYNSLVHGLCKSR 1207
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
++A L++ S D + YN +I D K + LQ + L D
Sbjct: 1208 RFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLF-LQMLS--DGLAPDD 1264
Query: 318 IT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
+T ++ SL K ++EA +LE + + ++ G+ + G ++KA +L+
Sbjct: 1265 VTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQL 1324
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
++ KG P ++SI + + + +A E ++ L
Sbjct: 1325 LLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETML 1361
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 71/372 (19%), Positives = 153/372 (41%), Gaps = 49/372 (13%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQG-LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE 133
VI+ L S ++ AL++ + M G V ++ +D + K ++ A E
Sbjct: 918 VIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLV-----E 972
Query: 134 DKVDK-------LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTG 186
D V K Y +LL+ + G +DE+ +L+Q+M G + + YN I+ + G
Sbjct: 973 DMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLG 1032
Query: 187 QHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHIS------ 240
+ ++ +L +M + G P+ +Y + ++++ + +++ M + ++
Sbjct: 1033 RIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYN 1092
Query: 241 ----------------------MDWGTYSTVANY-YIIAGLKEKAIIY--LKKCEDIVSK 275
+ G V +Y +IAGL + ++ + E ++S
Sbjct: 1093 SLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSN 1152
Query: 276 S--KDALGYNHLISHYASLGNKDEMMKFWGL-QKIKCKKQLNRDYITMLGSLVKIGELEE 332
+ D + +N +I D + + L Q+ C L Y +++ L K ++
Sbjct: 1153 NCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNL-VTYNSLVHGLCKSRRFDQ 1211
Query: 333 AEKMLEEWELSCYCY-DFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIA 391
AE +L E C D N ++ G + +++A + +++ G P ++SI+
Sbjct: 1212 AEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVI 1271
Query: 392 AGYADKNNMEKA 403
+ M++A
Sbjct: 1272 SSLCKWRFMDEA 1283
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 80/182 (43%), Gaps = 3/182 (1%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSL--ND 132
VI L KR A ++ M GLA +++ + + K R ++ A + N
Sbjct: 1235 VIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNG 1294
Query: 133 EDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
D YG L++ + + G +D++L ++Q + GS+ + ++ + + G+ +
Sbjct: 1295 FDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAG 1354
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
++L M G+ PD +Y + + + L+ L E+ Q D TY+T+ +
Sbjct: 1355 ELLETMLRAGLVPDTVTYNTLLKGF-CDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGH 1413
Query: 253 YI 254
+
Sbjct: 1414 LV 1415
Score = 42.0 bits (97), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 83/220 (37%), Gaps = 39/220 (17%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
V+ L +R A + + M G+ V +++ + K L+SA + +
Sbjct: 516 VVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAK 575
Query: 135 KVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM------------- 179
V + Y AL+N + G VD++ + Q+M G + + YN ++
Sbjct: 576 CVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAA 635
Query: 180 -------------------CL---YTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSY 217
CL N + E+ VL +MK+ G PD +Y + +
Sbjct: 636 EMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRAL 695
Query: 218 GARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
+ L +E +L+EME+ W + ++I G
Sbjct: 696 QKTNNLELVEQLLKEMEATEE--GQWNANGARLHRFVIRG 733
>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 133/318 (41%), Gaps = 29/318 (9%)
Query: 102 FSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQ 161
F D LDL ++ L A T F + ++N + G + E+ ++
Sbjct: 510 FKKGDSEKALDLFDQMLSLNIAPTDFT-----------FNTIINGLCKVGQMSEARDKLK 558
Query: 162 KMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARS 221
E G S + YN I+ + G + V +M E GV P+ +Y IN + +
Sbjct: 559 NFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSN 618
Query: 222 ELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAI-IYLKKCEDIVSKSKDAL 280
+ EM + + +D YS + + + E A ++ + E V S + +
Sbjct: 619 RIDLALKTRDEMREKG-LELDVTAYSALIDGFCKRRDMESAQDLFFELLE--VGLSPNRI 675
Query: 281 GYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR-------DYITMLGSLVKIGELEEA 333
YN +IS + L N + + ++ KK +N Y T++ L+K G L A
Sbjct: 676 VYNSMISGFRDLNNMEAALVWY-------KKMINDRIPCDLGTYTTLIDGLLKEGRLVFA 728
Query: 334 EKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAG 393
+ E D ++++ G KG +E A +L+E+ +K TP+ ++ + AG
Sbjct: 729 SDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAG 788
Query: 394 YADKNNMEKAFECMKEAL 411
Y + N+++AF E L
Sbjct: 789 YFREGNLKEAFTLHDEML 806
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 132/295 (44%), Gaps = 26/295 (8%)
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
+L+ Y +G +D +L+L K+ E G F + + Y+ ++ N+G EK ++ MK N
Sbjct: 330 SLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLN 389
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWG-----TYSTVANYYIIA 256
G+PP F+ + Y + E ++D G TY+ + ++
Sbjct: 390 GIPPSVFNVNSLLRGYLKAPLWEEASKLFDE-------AVDCGVANIFTYNIMMSWLCKG 442
Query: 257 GLKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN 314
G ++A L +++V++ + + YN +I + GN D + + K
Sbjct: 443 GKMDEACSLL---DNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNV 499
Query: 315 RDYITMLGSLVKIGELEEAEKMLEEW-ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
Y ++ K G+ E+A + ++ L+ DF N I+ G + G + +A LK
Sbjct: 500 VTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTF-NTIINGLCKVGQMSEARDKLK 558
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVS 428
+++G P+ +++ I G+ + N++ ALAV+ E + P++V+
Sbjct: 559 NFLEEGFIPSCMTYNSIVDGFIKEGNIDS-------ALAVYREMCEFGVSPNVVT 606
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/270 (20%), Positives = 118/270 (43%), Gaps = 12/270 (4%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +++ + G +DE+ SL+ M G + ++YN ++ + G + V DM
Sbjct: 432 YNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDML 491
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ P+ +Y I I+ + + ++ +M S + D+ T++T+ N G
Sbjct: 492 ARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDF-TFNTIINGLCKVGQM 550
Query: 260 EKAIIYLKKC--EDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD- 316
+A LK E + + YN ++ + GN D + + + C+ ++ +
Sbjct: 551 SEARDKLKNFLEEGFIPS---CMTYNSIVDGFIKEGNIDSALAVY---REMCEFGVSPNV 604
Query: 317 --YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
Y +++ K ++ A K +E D + ++ G+ ++ +E A + E
Sbjct: 605 VTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFE 664
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
+++ G +P ++ + +G+ D NNME A
Sbjct: 665 LLEVGLSPNRIVYNSMISGFRDLNNMEAAL 694
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 124/258 (48%), Gaps = 10/258 (3%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ++++ +++EG +D +L++ ++M E G + + Y ++ + + + + +M+
Sbjct: 572 YNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMR 631
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E G+ D +Y I+ + R ++ S +++ E+ + +S + Y+++ + +
Sbjct: 632 EKGLELDVTAYSALIDGFCKRRDMESAQDLFFEL-LEVGLSPNRIVYNSMISGFRDLNNM 690
Query: 260 EKAIIYLKKCEDIVSKSKDALG-YNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
E A+++ KK I + LG Y LI L + ++ L K + D I
Sbjct: 691 EAALVWYKKM--INDRIPCDLGTYTTLID---GLLKEGRLVFASDLYMEMLSKGIVPDII 745
Query: 319 T---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
T ++ L G+LE A K+LEE + + N ++ GY ++G +++A + E+
Sbjct: 746 TFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEM 805
Query: 376 VKKGKTPTPNSWSIIAAG 393
+ +G P ++ I+ G
Sbjct: 806 LDRGLVPDDVTYDILING 823
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 134/329 (40%), Gaps = 38/329 (11%)
Query: 120 LESAETYFNSLNDEDKVD--KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNG 177
+E+A FN++ +D + LL VR ++ E L KM G +G +
Sbjct: 166 IENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHV 225
Query: 178 IMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS 237
++ G+ E+ + + KE GV D +Y I I + + + +L+EM+ +
Sbjct: 226 MVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERG 285
Query: 238 HISMDWGTYSTVANYYIIAG-------LKEKAIIYLKKCEDIVSKS-------------- 276
+ + T+++V + G LKE+ I K +V+ S
Sbjct: 286 WVPSE-ATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSA 344
Query: 277 -------------KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGS 323
+ + Y+ LI + GN ++ + + K+ + ++L
Sbjct: 345 LNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRG 404
Query: 324 LVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPT 383
+K EEA K+ +E + C + NI++ + G +++A ++L +V +G P
Sbjct: 405 YLKAPLWEEASKLFDE-AVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPN 463
Query: 384 PNSWSIIAAGYADKNNMEKAFECMKEALA 412
S++ + G+ K NM+ A + LA
Sbjct: 464 VVSYNDMILGHCRKGNMDMASSVFSDMLA 492
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 138/324 (42%), Gaps = 20/324 (6%)
Query: 99 GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED-KVDK-LYGALLNCYVREGLVDES 156
G F+VH V + K +E AE YF + K+D Y ++ ++ +
Sbjct: 218 GDHFTVH---VMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLG 274
Query: 157 LSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINS 216
L L+++MKE G S + ++ G + + +M G P + +
Sbjct: 275 LELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKG 334
Query: 217 YGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAI-IYLKKCEDIVSK 275
Y A+ L S N+ ++ ++ + + TYS + +G EKA +Y + + +
Sbjct: 335 YCAQGNLDSALNLFNKI-TEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPP 393
Query: 276 SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEK 335
S N L+ Y +E K + + + C Y M+ L K G+++EA
Sbjct: 394 S--VFNVNSLLRGYLKAPLWEEASKLFD-EAVDCGVANIFTYNIMMSWLCKGGKMDEACS 450
Query: 336 MLEEWELSCYCYDFRVPNII-----LLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSII 390
+L+ VPN++ +LG+ +KG ++ A +V +++ + P ++SI+
Sbjct: 451 LLDNM-----VNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSIL 505
Query: 391 AAGYADKNNMEKAFECMKEALAVH 414
G K + EKA + + L+++
Sbjct: 506 IDGNFKKGDSEKALDLFDQMLSLN 529
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 44/236 (18%), Positives = 103/236 (43%), Gaps = 34/236 (14%)
Query: 56 VLDQWVLEGQKISELELQR----------------VIRQLRSRKRFKHALQVSEWMSGQG 99
++D ++ EG S L + R +I R AL+ + M +G
Sbjct: 575 IVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKG 634
Query: 100 LAFSVHDHAVQLDLIGKVRGLESAETYFNSLND----EDKVDKLYGALLNCYVREGLVDE 155
L V ++ +D K R +ESA+ F L + +++ +Y ++++ + ++
Sbjct: 635 LELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRI--VYNSMISGFRDLNNMEA 692
Query: 156 SLSLMQKM------KEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFS 209
+L +KM ++G++ + + +G++ G+ D+ ++M G+ PD +
Sbjct: 693 ALVWYKKMINDRIPCDLGTYTTLI--DGLL----KEGRLVFASDLYMEMLSKGIVPDIIT 746
Query: 210 YRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
+ + +N + +L + +L+EM+ ++ + +A Y+ LKE ++
Sbjct: 747 FHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLH 802
>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1023
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 129/279 (46%), Gaps = 10/279 (3%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ++N Y +G +++L ++ +MK G +A+ YN ++ TG EK L +M
Sbjct: 673 YNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEML 732
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
P +++ + +Y +RSE + + E S + + Y+T+ + G+
Sbjct: 733 VMEFVPTPITHKFLVKAY-SRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMT 791
Query: 260 EKAIIYLKKCEDIVSK--SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
KA + L +++V + S D + YN LI Y + + ++ +K + + Y
Sbjct: 792 RKAKVVL---DEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTY 848
Query: 318 ITMLGSLVKIG----ELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
T+LG L G +EE EK++ E + +I++ GY + G +K +
Sbjct: 849 NTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHI 908
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
E++ KG PT +++++ + YA M +A E + + L
Sbjct: 909 EMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLT 947
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 158/364 (43%), Gaps = 34/364 (9%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I L R A + M +G++F + +D + KV + AE F ++ +
Sbjct: 397 IINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLN 456
Query: 135 KVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
Y ALL+ Y + G ++ + ++QKM++ + + ++ I+ Y G K
Sbjct: 457 LAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAV 516
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMES----QSHISMDWGTYST 248
DVL +M + V P+ Y I I+ Y E ++ +EM+S +S++ D
Sbjct: 517 DVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDI----L 572
Query: 249 VANYYIIAGLKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQK 306
+ N + + E + + D+ SK D + Y LI Y GN+ + +Q+
Sbjct: 573 LNNLKRVGRMDEARSLII----DMYSKGIDPDIVNYASLIDGYFKEGNQLAALSI--VQE 626
Query: 307 IKCKKQLNRD---YITMLGSLVKIGELEE---AEKMLEEWELSCYCYDFRVPNIILLGYS 360
+K +K + D Y ++ L+++G+ + +M+ E L+ C + N I+ Y
Sbjct: 627 MK-EKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMI-ELGLAPDCITY---NTIINTYC 681
Query: 361 QKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFW 420
KG E A +L E+ G P +++I+ G +EKA + E L + +
Sbjct: 682 IKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVME-----F 736
Query: 421 RPKP 424
P P
Sbjct: 737 VPTP 740
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 47/275 (17%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+ Y + V+ES SL +KM G + + I+ + G+ + + +M
Sbjct: 324 YTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMY 383
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E G+ P++ SY INS + N+ +M + IS D T +TV + GL
Sbjct: 384 EMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRG-ISFDIVTCTTVMD-----GLF 437
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
+ V K+K+A +E+ F + K+ Y
Sbjct: 438 K------------VGKTKEA----------------EEV--FETILKLNLAPNC-VTYSA 466
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL-----GYSQKGMIEKADAVLKE 374
+L K+G++E AE +L++ E + PN+I GY++KGM+ KA VL+E
Sbjct: 467 LLDGYCKLGKMELAELVLQKME-----KEHVPPNVITFSSIINGYAKKGMLSKAVDVLRE 521
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
+V++ P ++I+ GY + A + KE
Sbjct: 522 MVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKE 556
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 79/379 (20%), Positives = 158/379 (41%), Gaps = 31/379 (8%)
Query: 99 GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL-YGALLNCYVREGLVDESL 157
G+ V V + + KV L+ A Y + ND +D + Y ++ + ++GLVD+
Sbjct: 124 GVVPDVFSVNVLVHSLCKVGDLDLALGYLRN-NDVVDIDNVTYNTVIWGFCQKGLVDQGF 182
Query: 158 SLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSY 217
L+ +M + G ++ N ++ Y G + V+ ++ + GV D I+ Y
Sbjct: 183 GLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGY 242
Query: 218 GARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSK 277
+ L S L E +S + +D TY+T+ + G L + E +
Sbjct: 243 -CEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTG-------DLTRAESL----- 289
Query: 278 DALGYNHLISHYAS---LGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
+N ++ + L N D + + +IK + Y T++ + K +EE+
Sbjct: 290 ----FNEILGFWKDEDRLKNNDVVTQ----NEIKNLQPTLVTYTTLIAAYCKFVGVEESH 341
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGY 394
+ ++ ++ D + IL G+ + G + +A + +E+ + G P S++ I
Sbjct: 342 SLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSL 401
Query: 395 ADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKV 454
+ +AF + V F + V L +G ++ EEV F + LK+ +
Sbjct: 402 FKSGRVMEAFNLQSQ--MVVRGISFDIVTCTTVMDGLFKVGKTKEAEEV--FETILKLNL 457
Query: 455 QKRNM-YHALTEAHIRSGQ 472
+ Y AL + + + G+
Sbjct: 458 APNCVTYSALLDGYCKLGK 476
>gi|302801572|ref|XP_002982542.1| hypothetical protein SELMODRAFT_421995 [Selaginella moellendorffii]
gi|300149641|gb|EFJ16295.1| hypothetical protein SELMODRAFT_421995 [Selaginella moellendorffii]
Length = 537
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 105/467 (22%), Positives = 204/467 (43%), Gaps = 67/467 (14%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
L++ + PL P V PV+ + E +KI + V+ +LR+ +R K AL + +W++
Sbjct: 106 ERLWNELLPLTIPSVG--PVVKLTIGEDRKIGLPGILYVVGKLRTFRRSKQALSILDWLA 163
Query: 97 GQGLAFSVHDHA---VQLDLIGKVRGLESAETYFNSLNDEDKV-DKLYGALLNCYVREGL 152
+ F D + + + + +V + AE F S+ E ++ +KL GA+ Y
Sbjct: 164 EEK-PFGEFDESLYKLHISIAFEVNSVHKAEKIFESVPKELQLQEKLLGAMAAGYA---- 218
Query: 153 VDESLSLMQKMKEM---GSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFS 209
S M K++E+ + + Y ++ LY ++K + +K + PD +
Sbjct: 219 ---SAHRMDKVEEILLQCNLSAMEPYTALIKLYFRVALYDKAASLYKRIKAAKLEPDLAA 275
Query: 210 YRICINSYGARSELSSMENV-LQEMESQSHISM-DWGTYSTVANYYIIAGLKEKAIIYLK 267
+ + E SS+E++ +E+E + +++ G Y I A + +A++
Sbjct: 276 FAALLR------EKSSLESLKPRELEEDAEVALHHAGAYEE--ELTIKAPVASQAMV--- 324
Query: 268 KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD---YITMLGSL 324
+S Y LG ++ K W ++IK +K + Y+ + +
Sbjct: 325 ------------------VSGY--LGKAAQVTKLW--KRIKQEKSSSIPAVCYLNAIEAF 362
Query: 325 VKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTP 384
G++ AEK+ +E E++ Y + ++ YS+ M +KA+AV+ ++ G
Sbjct: 363 GAAGKVRSAEKVADEMEMAKSKY-VELSAAMICVYSRNQMADKAEAVIDDLRANGVWNLF 421
Query: 385 NSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVE 444
+ + GY D N ++A + +K AL V K +P +++ +L RD E E
Sbjct: 422 RPHAELITGYLDSNQPDQAMKALKVALLV----KLMKPTYAVILKMLPVFERLRDAEGAE 477
Query: 445 AFVSSLKIKVQKRNMYHAL----TEAHIRSGQEVDG--LLESMKADD 485
V K R MY L A ++ +E++ +L+ + DD
Sbjct: 478 DMVMRYKGATDLR-MYKGLLRIYVSAKVKPLEEIEARLMLKKIPLDD 523
>gi|449457361|ref|XP_004146417.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Cucumis sativus]
Length = 858
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 156/358 (43%), Gaps = 35/358 (9%)
Query: 81 SRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE--DKVDK 138
+ K+ +++V + ++ S + + +D GK L+ A T F ++ E
Sbjct: 293 TNKKKAASVKVESSLHPPHVSLSTYTYNTLIDTYGKAGQLKEASTTFENMLKEGVSPTTV 352
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+ +++ G + E LMQKM+E+ YN ++ LY + + +M
Sbjct: 353 TFNTMIHICGNHGQLKEVTFLMQKMEELQCPPDTRTYNILISLYAKHDNIDLASNYFAEM 412
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
+E G+ PD SYR + +Y R ++ E ++ EM+ + + +D T S + YI AG+
Sbjct: 413 EEAGLQPDIVSYRTLLYAYSIRHMVAEAEKLITEMDERG-LEIDEFTQSALTRMYIDAGM 471
Query: 259 KEKAIIYLKK-------CEDIVSKSKDALGYNHLI--SHYASLGNKDE----------MM 299
E++ + + + S + DA G I + + ++E M+
Sbjct: 472 LEESWSWFWRFHLAGHMSSECYSANIDAYGERGFILEAERVFVSCQEEKKCTVLEFNVMI 531
Query: 300 KFWGLQKIKCKKQLNRDYITMLG---------SLVKIGELEEAEKM----LEEWELSCYC 346
K +G+ K K Q D + G SL++I + M L++ + +
Sbjct: 532 KAYGVVKDYAKAQKIFDSMKSNGVVPDKCSYSSLIQILTGADMPAMALAYLKKMQSAGLV 591
Query: 347 YDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
D ++++ +S+ G +E AD + +E+VK G P + ++ +AD ++++A
Sbjct: 592 SDCIPYSVVISSFSKLGHLEMADKLYREMVKHGVQPDIIVYGVLINAFADAGSVKEAI 649
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 84/421 (19%), Positives = 184/421 (43%), Gaps = 30/421 (7%)
Query: 79 LRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED--K 135
L+ + ++ AL++ EW + G +V + + L +GK + E+ + +N +
Sbjct: 160 LKEQTSWERALEIFEWFNMAGCYEVNVIHYNIVLGTLGKAQKWRLVESLWVEMNKKGIKP 219
Query: 136 VDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVL 195
++ YG L++ Y + G +E+L +++M E G + ++ LY G+ +K
Sbjct: 220 INSTYGTLIDVYSKGGFKEEALVWLERMNEQGMEPDEVTMGIVVQLYKKAGEFQKAESFF 279
Query: 196 LDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYII 255
+ ++ Y I A ++ S + H+S+ TY+T+ + Y
Sbjct: 280 ----KKWSSCNSMKYEITNKKKAASVKVESSLH-------PPHVSLSTYTYNTLIDTYGK 328
Query: 256 AG-LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGN-KDEMMKFWGLQKIKCKKQL 313
AG LKE + + ++ VS + + +N +I + G K+ +++++C
Sbjct: 329 AGQLKEASTTFENMLKEGVSPT--TVTFNTMIHICGNHGQLKEVTFLMQKMEELQCPPD- 385
Query: 314 NRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
R Y ++ K ++ A E E + D +L YS + M+ +A+ ++
Sbjct: 386 TRTYNILISLYAKHDNIDLASNYFAEMEEAGLQPDIVSYRTLLYAYSIRHMVAEAEKLIT 445
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECM-KEALAVHEENKFWRPKPSLVSSILD 432
E+ ++G + S + Y D +E+++ + LA H ++ + S+ +D
Sbjct: 446 EMDERGLEIDEFTQSALTRMYIDAGMLEESWSWFWRFHLAGHMSSECY-------SANID 498
Query: 433 WLGDNRDVEEVE-AFVSSLKIKVQKRNMYHALTEAH--IRSGQEVDGLLESMKADDIDED 489
G+ + E E FVS + K ++ + +A+ ++ + + +SMK++ + D
Sbjct: 499 AYGERGFILEAERVFVSCQEEKKCTVLEFNVMIKAYGVVKDYAKAQKIFDSMKSNGVVPD 558
Query: 490 K 490
K
Sbjct: 559 K 559
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 97/217 (44%), Gaps = 5/217 (2%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLN 145
AL + M GL ++V + K+ LE A+ + + + YG L+N
Sbjct: 578 ALAYLKKMQSAGLVSDCIPYSVVISSFSKLGHLEMADKLYREMVKHGVQPDIIVYGVLIN 637
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
+ G V E+++ + MK G G+ + YN ++ LYT G ++ + +++ P
Sbjct: 638 AFADAGSVKEAINYVNAMKRDGLSGNTVIYNSLIKLYTKVGYLKEAHEAYKMLEQTDDGP 697
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
+S I+ Y RS + E + + ++ + + T++ + Y G ++AI
Sbjct: 698 AIYSSNCMIDLYSERSMVKEAEEIFESLKKKGE--ANEFTFAMMLCMYKKIGRIQEAICV 755
Query: 266 LKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFW 302
++ ++ S D L +N++IS YA G E + +
Sbjct: 756 ARQMKEQGLLS-DLLSFNNMISLYAMDGRFKEAVSIF 791
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 138/327 (42%), Gaps = 30/327 (9%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y A ++ Y G + E+ + +E + L +N ++ Y + K + MK
Sbjct: 493 YSANIDAYGERGFILEAERVFVSCQEEKKC-TVLEFNVMIKAYGVVKDYAKAQKIFDSMK 551
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
NGV PD SY I + L++M+S +S D YS V + + G
Sbjct: 552 SNGVVPDKCSYSSLIQILTGADMPAMALAYLKKMQSAGLVS-DCIPYSVVISSFSKLGHL 610
Query: 260 EKA-IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
E A +Y + + V D + Y LI+ +A G+ E + + K Y
Sbjct: 611 EMADKLYREMVKHGVQP--DIIVYGVLINAFADAGSVKEAINYVNAMKRDGLSGNTVIYN 668
Query: 319 TMLGSLVKIGELEEAE---KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
+++ K+G L+EA KMLE+ + Y N ++ YS++ M+++A+ + + +
Sbjct: 669 SLIKLYTKVGYLKEAHEAYKMLEQTDDGPAIYS---SNCMIDLYSERSMVKEAEEIFESL 725
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILD--- 432
KKG+ N ++ +A M K ++EA+ V + K + L+S +L
Sbjct: 726 KKKGEA---NEFT-----FAMMLCMYKKIGRIQEAICVARQMK----EQGLLSDLLSFNN 773
Query: 433 ----WLGDNRDVEEVEAFVSSLKIKVQ 455
+ D R E V F +K VQ
Sbjct: 774 MISLYAMDGRFKEAVSIFQEMMKAAVQ 800
>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
Japonica Group]
gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
Length = 551
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 162/360 (45%), Gaps = 43/360 (11%)
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
+++ Y + G V + L+ +M G +AL YN ++ YT +++ ++L M+ G
Sbjct: 149 VVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEG 208
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
+ P +Y I ++ A +++ +E V +EM+S+ ++S D YS+V N Y AG +A
Sbjct: 209 IEPTVGTYTILVDGLSAARDITKVEAVFEEMKSK-NLSGDVYFYSSVINAYCRAGNVRRA 267
Query: 263 IIYLKKCEDIVSKSKDALGYNHLISHYASLGN--------KDEMMKFWGLQKIKCKKQLN 314
+C + + Y LI+ + +G D ++ G+ +I
Sbjct: 268 SEVFDECVGNGIEPNEHT-YGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIV------ 320
Query: 315 RDYITMLGSLVKIGELEEAE--KMLEE---WELSCYCYDFRVPNIILLGYSQKGMIEKAD 369
+ TM+ + +++A KM+ E EL Y Y N + G + +++A
Sbjct: 321 --FNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTY-----NTLACGLRRANRMDEAK 373
Query: 370 AVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVS- 428
+L+ +++KG P S++ + + + ++ +M +A +E E PSLV+
Sbjct: 374 NLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAE-------PSLVTY 426
Query: 429 -SILDWLGDNRDVEEVEAFVSSLKIK--VQKRNMYHALTEAHIRSGQEVD---GLLESMK 482
++D + E E F + ++ K V Y AL H +G+ VD L E MK
Sbjct: 427 NVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGK-VDVALRLFEEMK 485
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 107/250 (42%), Gaps = 4/250 (1%)
Query: 86 KHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED-KVDKL-YGAL 143
+ A +V + G G+ + H + ++ K+ +E+AE + ++++ + +
Sbjct: 265 RRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTM 324
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
++ Y R+ +VD++L + M++MG YN + C + ++ ++L M E GV
Sbjct: 325 IDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGV 384
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAI 263
P++ SY I+ + ++ + +EM TY+ + + YI G +A
Sbjct: 385 RPNHVSYTTLISIHCNEGDMVEARRLFREMAGNG-AEPSLVTYNVMMDGYIKKGSIREAE 443
Query: 264 IYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGS 323
+ + E D Y L+ + G D ++ + K + K Y ++
Sbjct: 444 RFKNEMEK-KGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISG 502
Query: 324 LVKIGELEEA 333
L K G EEA
Sbjct: 503 LAKEGRSEEA 512
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 2/124 (1%)
Query: 95 MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLY--GALLNCYVREGL 152
M+G G S+ + V +D K + AE + N + + V +Y AL++ + G
Sbjct: 414 MAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGK 473
Query: 153 VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
VD +L L ++MK+ GS + + Y ++ G+ E+ + +M +G+ PD+ Y
Sbjct: 474 VDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSA 533
Query: 213 CINS 216
+ S
Sbjct: 534 LVGS 537
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 135/279 (48%), Gaps = 12/279 (4%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+YG L++ +++EG E+ ++++M G + + Y+ ++ GQ + +L +M
Sbjct: 350 VYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEM 409
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
+ G+ PD F+Y + + + + +L EM + S I + +Y + N G
Sbjct: 410 IKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRN-SGILPNVYSYGIMINGLCQNGE 468
Query: 259 KEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
++A L E+++S+ +A Y LI ++ GN + L+K+ K ++ D
Sbjct: 469 SKEAGNLL---EEMISEGLKPNAFMYAPLIIGHSKEGNIS--LACEALEKMT-KANVHPD 522
Query: 317 ---YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
Y +++ L +G +EEAE+ + + D + ++ GY + G +EKAD +L+
Sbjct: 523 LFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLR 582
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
+++ G P ++++ + GY N+ EK ++ L
Sbjct: 583 QMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLG 621
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/401 (20%), Positives = 161/401 (40%), Gaps = 58/401 (14%)
Query: 94 WMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV--DKLYGALLNCYVREG 151
+M G G+ V+ ++ ++ K R ++A+ F + D + Y +++ R G
Sbjct: 233 FMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSG 292
Query: 152 LVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYR 211
V+E+ ++M + G A Y +M + ++ +L +M +G+ P+ Y
Sbjct: 293 AVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYG 352
Query: 212 ICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCED 271
++ + + + ++L+EM S + + + Y + G +A LK+
Sbjct: 353 TLVDGFMKEGKTAEAFDILKEMIS-AGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIK 411
Query: 272 IVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR--DYITMLGSLVKIGE 329
V D YN L+ + +KD F L +++ L Y M+ L + GE
Sbjct: 412 -VGLRPDTFTYNPLMQGHFQQHDKDG--AFELLNEMRNSGILPNVYSYGIMINGLCQNGE 468
Query: 330 LEEAEKMLEEW-------------------------ELSC---------------YCYDF 349
+EA +LEE L+C +CY
Sbjct: 469 SKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCY-- 526
Query: 350 RVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
N ++ G S G +E+A+ ++ K+G P ++S + GY N+EKA + +++
Sbjct: 527 ---NSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQ 583
Query: 410 ALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL 450
L N +P + +L+ + D E+V + + S+
Sbjct: 584 ML-----NSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSM 619
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 118/293 (40%), Gaps = 39/293 (13%)
Query: 114 IGKVRGLESAETYFNSLNDEDKVDK--LYGALLNCYVREGLVDESLSLMQKMKEMGSFGS 171
+ V +E AE Y+ + V Y L++ Y + G ++++ L+++M G +
Sbjct: 533 LSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPN 592
Query: 172 ALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQ 231
A Y ++ Y + +EK+ +L M +G PDN Y I I + + VL
Sbjct: 593 ADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLT 652
Query: 232 EMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYAS 291
E+E + D YS+ +I+GL C+ I K +
Sbjct: 653 EVEKNGLVP-DLHIYSS-----LISGL----------CK-IADMEK-------------A 682
Query: 292 LGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRV 351
+G DEM K I C Y ++ + G++ A + + +
Sbjct: 683 VGLLDEMAKEGLEPGIVC-------YNALIDGFCRSGDISRARNVFDSILAKGLVPNCVT 735
Query: 352 PNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
++ G + G I A + KE++ +G P ++++A G +D ++E+A
Sbjct: 736 YTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQAL 788
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 63/304 (20%), Positives = 124/304 (40%), Gaps = 7/304 (2%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
YG ++N + G E+ +L+++M G +A Y ++ ++ G + L M
Sbjct: 456 YGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMT 515
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ V PD F Y I + E +++ + + D TYS + + Y G
Sbjct: 516 KANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVP-DEFTYSGLIHGYCKTGNL 574
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
EKA L++ + K +A Y L+ Y + +++ K N Y
Sbjct: 575 EKADQLLRQMLNSGLKP-NADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGI 633
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
++ +L + +E A +L E E + D + + ++ G + +EKA +L E+ K+G
Sbjct: 634 VIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEG 693
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRD 439
P ++ + G+ ++ +A LA K P ++++D N D
Sbjct: 694 LEPGIVCYNALIDGFCRSGDISRARNVFDSILA-----KGLVPNCVTYTALIDGNCKNGD 748
Query: 440 VEEV 443
+ +
Sbjct: 749 ITDA 752
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 113/271 (41%), Gaps = 37/271 (13%)
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
L++ Y + G V + ++ M ++G + NG++ E + + M+ G
Sbjct: 179 LVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKLKGFMEGAG 238
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
+ PD ++Y I ++ + + + V +EM + +M+ TY+ +I+GL
Sbjct: 239 ILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRD-CAMNEVTYNV-----MISGLCRSG 292
Query: 263 IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLG 322
+ ++A G+ K+EM+ +GL Y ++
Sbjct: 293 AV------------EEAFGF------------KEEMVD-YGLSPDAFT------YGALMN 321
Query: 323 SLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTP 382
L K L+EA+ +L+E S + V ++ G+ ++G +A +LKE++ G P
Sbjct: 322 GLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQP 381
Query: 383 TPNSWSIIAAGYADKNNMEKAFECMKEALAV 413
+ + G + +A + +KE + V
Sbjct: 382 NKIMYDNLIRGLCKIGQLGRASKLLKEMIKV 412
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 88/416 (21%), Positives = 173/416 (41%), Gaps = 19/416 (4%)
Query: 76 IRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDK 135
I L R A ++ + M +G + + V + + ++ ++ A N + + +
Sbjct: 312 IHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNV 371
Query: 136 VDKLYGALLNCYVREGLVDESLSLM-QKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDV 194
V L+ L+N YV G +DE+ ++M + M +G YN ++ G ++
Sbjct: 372 V--LFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSAREL 429
Query: 195 LLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYI 254
+ +M+ G P+ +Y I I+ + L NVL EM + ++++ Y N I
Sbjct: 430 MNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKG-LALNAVGY----NCLI 484
Query: 255 IAGLK-EKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKK 311
A K EK L D+ SK D +N LI + +E + + ++
Sbjct: 485 SALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVI 544
Query: 312 QLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAV 371
Y T++ + ++ G ++EA K++ + D N ++ + G IEK A+
Sbjct: 545 ANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLAL 604
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSIL 431
++++ KG P S +I+ G N++ A E +++ + ++ P +S++
Sbjct: 605 FEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMI-----HRGLTPDIVTYNSLI 659
Query: 432 DWLGDNRDVEEVEAFVSSLKIK--VQKRNMYHALTEAHIRSGQEVDG-LLESMKAD 484
+ L +E L+++ Y+ L H + G D LL S D
Sbjct: 660 NGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVD 715
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 127/302 (42%), Gaps = 47/302 (15%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVL---L 196
Y L++ + +EG ++E+ +++ EM G ALN G CL + + EK+ D L
Sbjct: 445 YTILIDRFCKEGRLEEARNVLD---EMSGKGLALNAVGYNCLISALCKDEKVQDALNMFG 501
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
DM G PD F++ I ++ + Q+M + I+ + TY+T+ + ++
Sbjct: 502 DMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIA-NTITYNTLIHAFLRR 560
Query: 257 GLKEKAIIYLKKCEDIVSKSK--DALGYNHLISHYASLGN--------KDEMMKFWGLQK 306
G ++A LK D++ + D + YN LI GN +D M K
Sbjct: 561 GAMQEA---LKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNN 617
Query: 307 IKCKKQLN---------------RDYI------------TMLGSLVKIGELEEAEKMLEE 339
I C +N RD I +++ L K G +EA + ++
Sbjct: 618 ISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDK 677
Query: 340 WELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNN 399
++ C D N ++ + ++GM + A +L V G P +W I+ + + + +
Sbjct: 678 LQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 737
Query: 400 ME 401
E
Sbjct: 738 QE 739
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 105/244 (43%), Gaps = 4/244 (1%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
VLD+ +G ++ + +I L ++ + AL + MS +G + + +
Sbjct: 464 VLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLC 523
Query: 116 KVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
KV E A + + E + Y L++ ++R G + E+L L+ M G +
Sbjct: 524 KVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDI 583
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
YNG++ G EK + DM G+ P+N S I IN + L++M
Sbjct: 584 TYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDM 643
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLG 293
+ ++ D TY+++ N G ++A+ K + + DA+ YN LIS + G
Sbjct: 644 IHRG-LTPDIVTYNSLINGLCKTGRAQEALNLFDKLQ-VEGICPDAITYNTLISWHCKEG 701
Query: 294 NKDE 297
D+
Sbjct: 702 MFDD 705
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 59/332 (17%), Positives = 139/332 (41%), Gaps = 21/332 (6%)
Query: 88 ALQVSEWMSGQ-GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV--DKLYGALL 144
++++ +W Q G + + +D +G ++ + + E V + L+ ++
Sbjct: 112 SMELFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIM 171
Query: 145 NCYVREGLVDESLSLMQKMKEMGSFGSAL-NYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
Y R GL ++ L+ M+ + S +YN ++ + + +P+V +M G+
Sbjct: 172 KHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGI 231
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAI 263
P +++ + + + +E+ S +L++M + + Y T+ + G + +
Sbjct: 232 SPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVP-NAIVYQTLIHALSKVG-RVNEV 289
Query: 264 IYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGS 323
+ L + ++ D +N I + E K ++ + Y ++
Sbjct: 290 LKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHG 349
Query: 324 LVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL-----GYSQKGMIEKADAVLKE-IVK 377
L ++G+++EA +L + PN++L GY +G +++A AV+ E ++
Sbjct: 350 LCRMGKVDEARMLLNK---------VPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLS 400
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
G P +++ + G K + A E M E
Sbjct: 401 VGCGPDIFTYNTLILGLCKKGYLVSARELMNE 432
>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
Length = 551
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 117/261 (44%), Gaps = 37/261 (14%)
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
+++ Y + G V + L+ +M G +AL YN ++ YT +++ ++L M+ G
Sbjct: 149 VVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEG 208
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
+ P +Y I ++ A +++ +E V +EM+S+ ++S D YS+V N Y AG +A
Sbjct: 209 IEPTVGTYTILVDGLSAARDITKVEAVFEEMKSK-NLSGDVYFYSSVINAYCRAGNVRRA 267
Query: 263 IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLG 322
+C +GN E + Y ++
Sbjct: 268 SEVFDEC----------------------VGNGIEPNEHT--------------YGALIN 291
Query: 323 SLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTP 382
KIG++E AE ++ + ++ + V N ++ GY +K M++KA + + K G
Sbjct: 292 GFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIEL 351
Query: 383 TPNSWSIIAAGYADKNNMEKA 403
+++ +A G N M++A
Sbjct: 352 DVYTYNTLACGLRRANRMDEA 372
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 108/250 (43%), Gaps = 4/250 (1%)
Query: 86 KHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED-KVDKL-YGAL 143
+ A +V + G G+ + H + ++ K+ +E+AE + ++++ + +
Sbjct: 265 RRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTM 324
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
++ Y R+ +VD++L + M++MG YN + C + ++ ++L M E GV
Sbjct: 325 IDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGV 384
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAI 263
P++ SY I+ + ++ + +EM TY+ + + YI G +A
Sbjct: 385 RPNHVSYTTLISIHCNEGDMVEARRLFREMAGNG-AEPSLVTYNVMMDGYIKKGSIREAE 443
Query: 264 IYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGS 323
+ K+ E D Y L+ + G D ++ + K + K Y ++
Sbjct: 444 RFKKEMEK-KGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISG 502
Query: 324 LVKIGELEEA 333
L K G EEA
Sbjct: 503 LAKEGRSEEA 512
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 2/124 (1%)
Query: 95 MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLY--GALLNCYVREGL 152
M+G G S+ + V +D K + AE + + + V +Y AL++ + G
Sbjct: 414 MAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGK 473
Query: 153 VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
VD +L L ++MK+ GS + + Y ++ G+ E+ + +M +G+ PD+ Y
Sbjct: 474 VDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSA 533
Query: 213 CINS 216
+ S
Sbjct: 534 LVGS 537
>gi|449518091|ref|XP_004166077.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g23020-like [Cucumis sativus]
Length = 859
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 156/358 (43%), Gaps = 35/358 (9%)
Query: 81 SRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE--DKVDK 138
+ K+ +++V + ++ S + + +D GK L+ A T F ++ E
Sbjct: 294 TNKKKAASVKVESSLHPPHVSLSTYTYNTLIDTYGKAGQLKEASTTFENMLKEGVSPTTV 353
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+ +++ G + E LMQKM+E+ YN ++ LY + + +M
Sbjct: 354 TFNTMIHICGNHGQLKEVTFLMQKMEELQCPPDTRTYNILISLYAKHDNIDLASNYFAEM 413
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
+E G+ PD SYR + +Y R ++ E ++ EM+ + + +D T S + YI AG+
Sbjct: 414 EEAGLQPDIVSYRTLLYAYSIRHMVAEAEKLITEMDERG-LEIDEFTQSALTRMYIDAGM 472
Query: 259 KEKAIIYLKK-------CEDIVSKSKDALGYNHLI--SHYASLGNKDE----------MM 299
E++ + + + S + DA G I + + ++E M+
Sbjct: 473 LEESWSWFWRFHLAGHMSSECYSANIDAYGERGFILEAERVFVSCQEEKKCTVLEFNVMI 532
Query: 300 KFWGLQKIKCKKQLNRDYITMLG---------SLVKIGELEEAEKM----LEEWELSCYC 346
K +G+ K K Q D + G SL++I + M L++ + +
Sbjct: 533 KAYGVVKDYAKAQKIFDSMKSNGVVPDKCSYSSLIQILTGADMPAMALAYLKKMQSAGLV 592
Query: 347 YDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
D ++++ +S+ G +E AD + +E+VK G P + ++ +AD ++++A
Sbjct: 593 SDCIPYSVVISSFSKLGHLEMADKLYREMVKHGVQPDIIVYGVLINAFADAGSVKEAI 650
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 84/421 (19%), Positives = 184/421 (43%), Gaps = 30/421 (7%)
Query: 79 LRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED--K 135
L+ + ++ AL++ EW + G +V + + L +GK + E+ + +N +
Sbjct: 161 LKEQTSWERALEIFEWFNMAGCYEVNVIHYNIVLGTLGKAQKWRLVESLWVEMNKKGIKP 220
Query: 136 VDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVL 195
++ YG L++ Y + G +E+L +++M E G + ++ LY G+ +K
Sbjct: 221 INSTYGTLIDVYSKGGFKEEALVWLERMNEQGMEPDEVTMGIVVQLYKKAGEFQKAESFF 280
Query: 196 LDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYII 255
+ ++ Y I A ++ S + H+S+ TY+T+ + Y
Sbjct: 281 ----KKWSSCNSMKYEITNKKKAASVKVESSLH-------PPHVSLSTYTYNTLIDTYGK 329
Query: 256 AG-LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGN-KDEMMKFWGLQKIKCKKQL 313
AG LKE + + ++ VS + + +N +I + G K+ +++++C
Sbjct: 330 AGQLKEASTTFENMLKEGVSPT--TVTFNTMIHICGNHGQLKEVTFLMQKMEELQCPPD- 386
Query: 314 NRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
R Y ++ K ++ A E E + D +L YS + M+ +A+ ++
Sbjct: 387 TRTYNILISLYAKHDNIDLASNYFAEMEEAGLQPDIVSYRTLLYAYSIRHMVAEAEKLIT 446
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECM-KEALAVHEENKFWRPKPSLVSSILD 432
E+ ++G + S + Y D +E+++ + LA H ++ + S+ +D
Sbjct: 447 EMDERGLEIDEFTQSALTRMYIDAGMLEESWSWFWRFHLAGHMSSECY-------SANID 499
Query: 433 WLGDNRDVEEVE-AFVSSLKIKVQKRNMYHALTEAH--IRSGQEVDGLLESMKADDIDED 489
G+ + E E FVS + K ++ + +A+ ++ + + +SMK++ + D
Sbjct: 500 AYGERGFILEAERVFVSCQEEKKCTVLEFNVMIKAYGVVKDYAKAQKIFDSMKSNGVVPD 559
Query: 490 K 490
K
Sbjct: 560 K 560
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 97/217 (44%), Gaps = 5/217 (2%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLN 145
AL + M GL ++V + K+ LE A+ + + + YG L+N
Sbjct: 579 ALAYLKKMQSAGLVSDCIPYSVVISSFSKLGHLEMADKLYREMVKHGVQPDIIVYGVLIN 638
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
+ G V E+++ + MK G G+ + YN ++ LYT G ++ + +++ P
Sbjct: 639 AFADAGSVKEAINYVNAMKRDGLSGNTVIYNSLIKLYTKVGYLKEAHEAYKMLEQTDDGP 698
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
+S I+ Y RS + E + + ++ + + T++ + Y G ++AI
Sbjct: 699 AIYSSNCMIDLYSERSMVKEAEEIFESLKKKGE--ANEFTFAMMLCMYKKIGRIQEAICV 756
Query: 266 LKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFW 302
++ ++ S D L +N++IS YA G E + +
Sbjct: 757 ARQMKEQGLLS-DLLSFNNMISLYAMDGRFKEAVSIF 792
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 138/327 (42%), Gaps = 30/327 (9%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y A ++ Y G + E+ + +E + L +N ++ Y + K + MK
Sbjct: 494 YSANIDAYGERGFILEAERVFVSCQEEKKC-TVLEFNVMIKAYGVVKDYAKAQKIFDSMK 552
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
NGV PD SY I + L++M+S +S D YS V + + G
Sbjct: 553 SNGVVPDKCSYSSLIQILTGADMPAMALAYLKKMQSAGLVS-DCIPYSVVISSFSKLGHL 611
Query: 260 EKA-IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
E A +Y + + V D + Y LI+ +A G+ E + + K Y
Sbjct: 612 EMADKLYREMVKHGVQP--DIIVYGVLINAFADAGSVKEAINYVNAMKRDGLSGNTVIYN 669
Query: 319 TMLGSLVKIGELEEAE---KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
+++ K+G L+EA KMLE+ + Y N ++ YS++ M+++A+ + + +
Sbjct: 670 SLIKLYTKVGYLKEAHEAYKMLEQTDDGPAIYS---SNCMIDLYSERSMVKEAEEIFESL 726
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILD--- 432
KKG+ N ++ +A M K ++EA+ V + K + L+S +L
Sbjct: 727 KKKGEA---NEFT-----FAMMLCMYKKIGRIQEAICVARQMK----EQGLLSDLLSFNN 774
Query: 433 ----WLGDNRDVEEVEAFVSSLKIKVQ 455
+ D R E V F +K VQ
Sbjct: 775 MISLYAMDGRFKEAVSIFQEMMKAAVQ 801
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 118/267 (44%), Gaps = 3/267 (1%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
++ +L YV +GL +L + M + G S + N ++ G+ V M
Sbjct: 158 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 217
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
G+ PD F I +N++ ++ +++ME+ + + TY ++ N Y+ G
Sbjct: 218 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLG-VEPNIVTYHSLINGYVSLGD 276
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFW-GLQKIKCKKQLNRDY 317
E A LK + S++ + Y LI Y DE K G+Q+ R Y
Sbjct: 277 VEAAKGVLKFMSE-KGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAY 335
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
++ + G++++A ++L+E + + N ++ GY ++G I +A+ V+ +V
Sbjct: 336 GVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVD 395
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAF 404
P S++ + GY + + +AF
Sbjct: 396 WNLKPDSYSYNTLLDGYCREGHTSEAF 422
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/386 (19%), Positives = 159/386 (41%), Gaps = 47/386 (12%)
Query: 91 VSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV---DKLYGALLNCY 147
V ++MS +G++ +V + + + K ++ AE + +E + ++ YG L++ Y
Sbjct: 283 VLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGY 342
Query: 148 VREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDN 207
R G +D+++ L+ +M +G + N ++ Y G+ + V+ M + + PD+
Sbjct: 343 CRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDS 402
Query: 208 FSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLK 267
+SY ++ Y S N+ +M + G TV
Sbjct: 403 YSYNTLLDGYCREGHTSEAFNLCDKMLQE-------GIEPTV------------------ 437
Query: 268 KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKI 327
L YN L+ +G D+ ++ W L Y T+L L K+
Sbjct: 438 ------------LTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKM 485
Query: 328 GELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSW 387
E A + ++ + N ++ G + G + +A+ + ++ G +P ++
Sbjct: 486 ENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITY 545
Query: 388 SIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFV 447
+ GY +N+ +AF+ +K A+ E + P + +S++ L +R + E +
Sbjct: 546 RTLIDGYCKASNVGQAFK-VKGAM----EREXISPSIEMYNSLISGLFKSRRLVEXTDLL 600
Query: 448 SSLKIKVQKRNM--YHALTEAHIRSG 471
+ + I+ N+ Y AL + + G
Sbjct: 601 TEMGIRGLTPNIVTYGALIDGWCKEG 626
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 121/281 (43%), Gaps = 23/281 (8%)
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
++N + ++G VDE+ ++KM+ +G + + Y+ ++ Y + G E VL M E G
Sbjct: 232 MVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKG 291
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
V + +Y + I Y + ++ E VL+ M+ ++ + D Y + + Y G + A
Sbjct: 292 VSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDA 351
Query: 263 IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEM------MKFWGLQKIKCKKQLNRD 316
+ L + + K+ + N LI+ Y G E M W L K +
Sbjct: 352 VRLLDEMLRLGLKT-NLFICNSLINGYCKRGEIHEAEGVITRMVDWNL------KPDSYS 404
Query: 317 YITMLGSLVKIGELEEA----EKMLEEW-ELSCYCYDFRVPNIILLGYSQKGMIEKADAV 371
Y T+L + G EA +KML+E E + Y N +L G + G + A +
Sbjct: 405 YNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTY-----NTLLKGLCRVGAFDDALQI 459
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
++K G P +S + G N E A K+ LA
Sbjct: 460 WHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILA 500
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 86/430 (20%), Positives = 175/430 (40%), Gaps = 32/430 (7%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
+ D+ + EG + + L +++ L F ALQ+ M G+A ++ LD +
Sbjct: 424 LCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLF 483
Query: 116 KVRGLESAETYFNSL--NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
K+ E A T + + K + +++ + G + E+ + KMK++G +
Sbjct: 484 KMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGI 543
Query: 174 NYNGIM---CLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVL 230
Y ++ C +N GQ K+ M+ + P Y I+ L ++L
Sbjct: 544 TYRTLIDGYCKASNVGQAFKVKGA---MEREXISPSIEMYNSLISGLFKSRRLVEXTDLL 600
Query: 231 QEMESQSHISMDWGTYSTVANYYIIAGLKEKAII-YLKKCEDIVSKSKDALGYNHLISHY 289
EM + ++ + TY + + + G+ +KA Y + E+ S + + + ++S
Sbjct: 601 TEMGIRG-LTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTEN--GLSANIIICSTMVSGL 657
Query: 290 ASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDF 349
LG DE +QK+ D+ L S ++ +++ L+E C F
Sbjct: 658 YRLGRIDEANLL--MQKM-VDHGFFPDHECFLKSDIRYAAIQKIADSLDE-----SCKTF 709
Query: 350 RVPN-----IILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
+PN I + G + G ++ A + KG P ++ + GY+ N+++AF
Sbjct: 710 LLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAF 769
Query: 405 ECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNM--YHA 462
E L + P +++++ L + +V+ + L K N+ Y+
Sbjct: 770 RLRDEML-----RRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNT 824
Query: 463 LTEAHIRSGQ 472
L + + + G
Sbjct: 825 LIDGYCKIGN 834
>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
Length = 603
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/366 (21%), Positives = 156/366 (42%), Gaps = 13/366 (3%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
++R +R F+ + M +G+ + H V L + R L+ A +YFNS++
Sbjct: 134 LLRGFAARDDFEVVNALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNK 193
Query: 135 KVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
L Y L++ + V+ + + ++M G + Y+ ++ + G+ ++
Sbjct: 194 CEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEAR 253
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
++ M G PP +Y + + +QEM + TYS +
Sbjct: 254 KLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPR-VDTYSFIVTG 312
Query: 253 YIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMK-FWGLQKIKCKK 311
YI G EKA +++ D + D + Y I S+G ++E K F + + CK
Sbjct: 313 YIGMGKVEKAFAVMEEMAD-RDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKP 371
Query: 312 QLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAV 371
++ Y ++ + K G + A +L + + + + +I+ G+ + +E+A +
Sbjct: 372 DMH-TYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALEL 430
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLV--SS 429
+ I+K G P+ +++ + M++A E ++E EE +PS+V S
Sbjct: 431 YQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEE-----LEPSIVTYSM 485
Query: 430 ILDWLG 435
I+ LG
Sbjct: 486 IIHGLG 491
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 121/273 (44%), Gaps = 37/273 (13%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ++ Y+ G V+++ ++M++M + ++Y + + G+ E+ V M
Sbjct: 306 YSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMV 365
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E G PD +Y I I+++ +++ +VL+ M+ ++ + + Y+ + + ++ +
Sbjct: 366 EKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMD-KAAVKPNRYIYTMIMDGFVKSSRL 424
Query: 260 EKAI-IYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
E+A+ +Y + +D + S + YN +I+ L DE ++
Sbjct: 425 EEALELYQRILKDGILPS--TVTYNTVINALCKLKKMDEALEL----------------- 465
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
L E ++ EE E S Y ++I+ G + GM E+A +L E++
Sbjct: 466 -----------LREMQRRKEELEPSIVTY-----SMIIHGLGKVGMEERAFDLLAEMIDN 509
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
G P +++ + A + +A E ++E L
Sbjct: 510 GVIPDCFTYTSLIQTLAGAGKVSRAMELLEEML 542
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 94/213 (44%), Gaps = 18/213 (8%)
Query: 205 PDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAII 264
P+ S+ I + + AR + + +L+EM+S+ I+ + T+ + + +KA+
Sbjct: 126 PNVSSFNILLRGFAARDDFEVVNALLREMKSRG-ITSNGATHGVILSALCARRDLDKAVS 184
Query: 265 YLK-----KCEDIV---SKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
Y KCE + + D L H + + +EM++ K K
Sbjct: 185 YFNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDV--FEEMIR-------KGYKPDIIA 235
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y +++ L K G ++EA K+++ I+ G + G I++A ++E+
Sbjct: 236 YSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMR 295
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
++ P +++S I GY +EKAF M+E
Sbjct: 296 RRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEE 328
>gi|297790207|ref|XP_002863007.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297308804|gb|EFH39266.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 842
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 154/381 (40%), Gaps = 45/381 (11%)
Query: 70 LELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNS 129
L++ + R+ + + F E + + S + + +D GK ++ A F
Sbjct: 264 LQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKR 323
Query: 130 LNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQ 187
+ +E V + +++ Y G E SLM+ MK YN ++ L+T
Sbjct: 324 MLEEGIVPTTVTFNTMIHVYGNNGQFGEVTSLMKTMK-FHCAPDTRTYNILISLHTKNND 382
Query: 188 HEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYS 247
E+ +MK G+ PD SYR + ++ R + E ++ EM+ + + +D T S
Sbjct: 383 IERAGTYFKEMKGAGLKPDPVSYRTLLYAFSIRRMVKEAEELIAEMD-DNDVEIDEYTQS 441
Query: 248 TVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDE---------- 297
+ YI A + EK+ + ++ V+ + + GY+ I Y G E
Sbjct: 442 ALTRMYIEAEMLEKSWSWFRRVH--VAGNMSSEGYSANIDAYGERGYLSEAERVFICCQE 499
Query: 298 -----------MMKFWGLQKIKCKKQLNR--------------DYITMLGSLVKIGELEE 332
M+K +G+ K C+K Y T++ L ++
Sbjct: 500 VNKRTVLEYNVMIKAYGISK-SCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPDK 558
Query: 333 AEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAA 392
A+ LE+ + Y D ++ + + G + A+ V KE+V+ P + ++
Sbjct: 559 AKCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLIN 618
Query: 393 GYADKNNMEKAF---ECMKEA 410
+AD N+++A E MKEA
Sbjct: 619 AFADTGNVQQAMSYVEAMKEA 639
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 97/205 (47%), Gaps = 8/205 (3%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTG---QHEKIPDVL 195
+YG L+N + G V +++S ++ MKE G G+++ YN ++ LYT G + E I L
Sbjct: 612 VYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKL 671
Query: 196 LDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYII 255
L PD ++ N RS + E + + M+ + + T++ + Y
Sbjct: 672 LRSCNETQYPDVYTSHCMNNLCSERSMVRKAEAIFESMKQRRE--ANEFTFAMMLCMYKK 729
Query: 256 AGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR 315
G E+A K+ ++ + D L YN ++ YA G E ++ + + + Q +
Sbjct: 730 NGRFEEATQIAKQMREMRILT-DPLSYNSVLGLYALDGRFKEAVETFK-EMVSSGIQPDD 787
Query: 316 DYITMLGS-LVKIGELEEAEKMLEE 339
LG+ L+K+G ++A + +EE
Sbjct: 788 STFKSLGTILIKLGMSKKAVRKIEE 812
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 122/295 (41%), Gaps = 18/295 (6%)
Query: 103 SVHDHAVQLDLIGKVRGLESAETYFNSLND----EDKVDKLYGALLNCYVREGLVDESLS 158
+V ++ V + G + E A F S+ DK Y L+ + D++
Sbjct: 504 TVLEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCT--YNTLVQILASADMPDKAKC 561
Query: 159 LMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYG 218
++KM+E G + Y ++ + GQ +V +M E + PD Y + IN++
Sbjct: 562 YLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFA 621
Query: 219 ARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG-LKEKAIIY---LKKC-EDIV 273
+ + ++ M+ ++ I + Y+++ Y G L E IY L+ C E
Sbjct: 622 DTGNVQQAMSYVEAMK-EAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLRSCNETQY 680
Query: 274 SKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR-DYITMLGSLVKIGELEE 332
+ N+L S S+ K E + + +K +++ N + ML K G EE
Sbjct: 681 PDVYTSHCMNNLCSE-RSMVRKAEAI----FESMKQRREANEFTFAMMLCMYKKNGRFEE 735
Query: 333 AEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSW 387
A ++ ++ D N +L Y+ G ++A KE+V G P +++
Sbjct: 736 ATQIAKQMREMRILTDPLSYNSVLGLYALDGRFKEAVETFKEMVSSGIQPDDSTF 790
>gi|413944457|gb|AFW77106.1| hypothetical protein ZEAMMB73_510937 [Zea mays]
Length = 492
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 10/176 (5%)
Query: 84 RFKHALQVSEWMSGQGLAFSVHD--HAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL-- 139
R+ AL+V E M Q + + H + + ++GK + E A F ++ DE L
Sbjct: 120 RWDSALKVFELMRDQ-VWYKPHIGIYIKLITMLGKCKQPEKAHQLFQAMIDEGCAPNLQS 178
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM---CLYTNTGQHEKIPDVLL 196
Y AL++ Y R G E+ L+ +MK+ + I+ CL+ EK+ +L
Sbjct: 179 YTALVSTYSRSGRFREAFDLLDRMKDTPGCQPDVQTYSILIKSCLHAY--DFEKVKSLLA 236
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
DM G+PP+ +Y I++YG + ME+ L +M SQ+ W ST+ +
Sbjct: 237 DMARAGIPPNTVTYNTLIDAYGKAGRFAEMESTLLKMLSQNCKPDVWTMNSTLRAF 292
>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 133/318 (41%), Gaps = 29/318 (9%)
Query: 102 FSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQ 161
F D LDL ++ L A T F + ++N + G + E+ ++
Sbjct: 550 FKKGDSEKALDLFDQMLSLNIAPTDFT-----------FNTIINGLCKVGQMSEARDKLK 598
Query: 162 KMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARS 221
E G S + YN I+ + G + V +M E GV P+ +Y IN + +
Sbjct: 599 NFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSN 658
Query: 222 ELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAI-IYLKKCEDIVSKSKDAL 280
+ EM + + +D YS + + + E A ++ + E V S + +
Sbjct: 659 RIDLALKTRDEMREKG-LELDVTAYSALIDGFCKRRDMESAQDLFFELLE--VGLSPNRI 715
Query: 281 GYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR-------DYITMLGSLVKIGELEEA 333
YN +IS + L N + + ++ KK +N Y T++ L+K G L A
Sbjct: 716 VYNSMISGFRDLNNMEAALVWY-------KKMINDRIPCDLGTYTTLIDGLLKEGRLVFA 768
Query: 334 EKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAG 393
+ E D ++++ G KG +E A +L+E+ +K TP+ ++ + AG
Sbjct: 769 SDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAG 828
Query: 394 YADKNNMEKAFECMKEAL 411
Y + N+++AF E L
Sbjct: 829 YFREGNLKEAFTLHDEML 846
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 132/295 (44%), Gaps = 26/295 (8%)
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
+L+ Y +G +D +L+L K+ E G F + + Y+ ++ N+G EK ++ MK N
Sbjct: 370 SLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLN 429
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWG-----TYSTVANYYIIA 256
G+PP F+ + Y + E ++D G TY+ + ++
Sbjct: 430 GIPPSVFNVNSLLRGYLKAPLWEEASKLFDE-------AVDCGVANIFTYNIMMSWLCKG 482
Query: 257 GLKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN 314
G ++A L +++V++ + + YN +I + GN D + + K
Sbjct: 483 GKMDEACSLL---DNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNV 539
Query: 315 RDYITMLGSLVKIGELEEAEKMLEEW-ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
Y ++ K G+ E+A + ++ L+ DF N I+ G + G + +A LK
Sbjct: 540 VTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTF-NTIINGLCKVGQMSEARDKLK 598
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVS 428
+++G P+ +++ I G+ + N++ ALAV+ E + P++V+
Sbjct: 599 NFLEEGFIPSCMTYNSIVDGFIKEGNIDS-------ALAVYREMCEFGVSPNVVT 646
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/270 (20%), Positives = 118/270 (43%), Gaps = 12/270 (4%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +++ + G +DE+ SL+ M G + ++YN ++ + G + V DM
Sbjct: 472 YNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDML 531
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ P+ +Y I I+ + + ++ +M S + D+ T++T+ N G
Sbjct: 532 ARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDF-TFNTIINGLCKVGQM 590
Query: 260 EKAIIYLKKC--EDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD- 316
+A LK E + + YN ++ + GN D + + + C+ ++ +
Sbjct: 591 SEARDKLKNFLEEGFIPS---CMTYNSIVDGFIKEGNIDSALAVY---REMCEFGVSPNV 644
Query: 317 --YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
Y +++ K ++ A K +E D + ++ G+ ++ +E A + E
Sbjct: 645 VTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFE 704
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
+++ G +P ++ + +G+ D NNME A
Sbjct: 705 LLEVGLSPNRIVYNSMISGFRDLNNMEAAL 734
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 124/258 (48%), Gaps = 10/258 (3%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ++++ +++EG +D +L++ ++M E G + + Y ++ + + + + +M+
Sbjct: 612 YNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMR 671
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E G+ D +Y I+ + R ++ S +++ E+ + +S + Y+++ + +
Sbjct: 672 EKGLELDVTAYSALIDGFCKRRDMESAQDLFFEL-LEVGLSPNRIVYNSMISGFRDLNNM 730
Query: 260 EKAIIYLKKCEDIVSKSKDALG-YNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
E A+++ KK I + LG Y LI L + ++ L K + D I
Sbjct: 731 EAALVWYKKM--INDRIPCDLGTYTTLID---GLLKEGRLVFASDLYMEMLSKGIVPDII 785
Query: 319 T---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
T ++ L G+LE A K+LEE + + N ++ GY ++G +++A + E+
Sbjct: 786 TFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEM 845
Query: 376 VKKGKTPTPNSWSIIAAG 393
+ +G P ++ I+ G
Sbjct: 846 LDRGLVPDDVTYDILING 863
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 134/329 (40%), Gaps = 38/329 (11%)
Query: 120 LESAETYFNSLNDEDKVD--KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNG 177
+E+A FN++ +D + LL VR ++ E L KM G +G +
Sbjct: 206 IENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHV 265
Query: 178 IMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS 237
++ G+ E+ + + KE GV D +Y I I + + + +L+EM+ +
Sbjct: 266 MVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERG 325
Query: 238 HISMDWGTYSTVANYYIIAG-------LKEKAIIYLKKCEDIVSKS-------------- 276
+ + T+++V + G LKE+ I K +V+ S
Sbjct: 326 WVPSE-ATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSA 384
Query: 277 -------------KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGS 323
+ + Y+ LI + GN ++ + + K+ + ++L
Sbjct: 385 LNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRG 444
Query: 324 LVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPT 383
+K EEA K+ +E + C + NI++ + G +++A ++L +V +G P
Sbjct: 445 YLKAPLWEEASKLFDE-AVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPN 503
Query: 384 PNSWSIIAAGYADKNNMEKAFECMKEALA 412
S++ + G+ K NM+ A + LA
Sbjct: 504 VVSYNDMILGHCRKGNMDMASSVFSDMLA 532
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 138/324 (42%), Gaps = 20/324 (6%)
Query: 99 GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED-KVDK-LYGALLNCYVREGLVDES 156
G F+VH V + K +E AE YF + K+D Y ++ ++ +
Sbjct: 258 GDHFTVH---VMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLG 314
Query: 157 LSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINS 216
L L+++MKE G S + ++ G + + +M G P + +
Sbjct: 315 LELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKG 374
Query: 217 YGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAI-IYLKKCEDIVSK 275
Y A+ L S N+ ++ ++ + + TYS + +G EKA +Y + + +
Sbjct: 375 YCAQGNLDSALNLFNKI-TEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPP 433
Query: 276 SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEK 335
S N L+ Y +E K + + + C Y M+ L K G+++EA
Sbjct: 434 S--VFNVNSLLRGYLKAPLWEEASKLFD-EAVDCGVANIFTYNIMMSWLCKGGKMDEACS 490
Query: 336 MLEEWELSCYCYDFRVPNII-----LLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSII 390
+L+ VPN++ +LG+ +KG ++ A +V +++ + P ++SI+
Sbjct: 491 LLDNM-----VNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSIL 545
Query: 391 AAGYADKNNMEKAFECMKEALAVH 414
G K + EKA + + L+++
Sbjct: 546 IDGNFKKGDSEKALDLFDQMLSLN 569
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 44/236 (18%), Positives = 103/236 (43%), Gaps = 34/236 (14%)
Query: 56 VLDQWVLEGQKISELELQR----------------VIRQLRSRKRFKHALQVSEWMSGQG 99
++D ++ EG S L + R +I R AL+ + M +G
Sbjct: 615 IVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKG 674
Query: 100 LAFSVHDHAVQLDLIGKVRGLESAETYFNSLND----EDKVDKLYGALLNCYVREGLVDE 155
L V ++ +D K R +ESA+ F L + +++ +Y ++++ + ++
Sbjct: 675 LELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRI--VYNSMISGFRDLNNMEA 732
Query: 156 SLSLMQKM------KEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFS 209
+L +KM ++G++ + + +G++ G+ D+ ++M G+ PD +
Sbjct: 733 ALVWYKKMINDRIPCDLGTYTTLI--DGLL----KEGRLVFASDLYMEMLSKGIVPDIIT 786
Query: 210 YRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
+ + +N + +L + +L+EM+ ++ + +A Y+ LKE ++
Sbjct: 787 FHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLH 842
>gi|326508346|dbj|BAJ99440.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 819
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 125/285 (43%), Gaps = 32/285 (11%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ALL Y G+ E+ + + +K+ G ++Y ++ Y + Q EK +V +M+
Sbjct: 368 YNALLGAYASHGMHTEAFGIFKLLKQNGLRPDVVSYTTLLNAYGRSAQPEKAREVFNEMR 427
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+N P+ SY I++YG+ ++L EME + I D + ST+ + A +
Sbjct: 428 KNSCKPNKVSYNALIDAYGSAGMFKEAISLLHEME-KDGIPPDVVSISTL----LAACGR 482
Query: 260 EKAIIYLKKCEDIVSKSK------DALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQL 313
+ K + ++ +K + + YN I Y S G+ ++ +K + +
Sbjct: 483 CRQT---TKIDTVLEAAKFRGIELNIVAYNSGIGSYLSFGDYEKALKLYATMM---ASNV 536
Query: 314 NRDYIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVP------NIILLGYSQKGM 364
N D +T ++ L K+G+ E+ K E+ D R+P + ++ Y ++
Sbjct: 537 NPDAVTYNILISGLCKLGKYAESLKFFED------MVDLRIPLTKEVYSSLICSYVKQDK 590
Query: 365 IEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
+ +A++ + G P +++ + Y D + ++ KE
Sbjct: 591 LAEAESTFINMKASGCFPDVLTYTAMIQAYTDHGSWTSVWDLFKE 635
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 96/452 (21%), Positives = 170/452 (37%), Gaps = 86/452 (19%)
Query: 45 PLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSV 104
P DP ++ VL+ W + + +IR++ +HA+ V WM Q
Sbjct: 97 PRADPH-AVDAVLNCW---AGRFARRNFPLLIREMAFSGSLEHAVYVFCWMKNQ------ 146
Query: 105 HDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMK 164
E Y + ND +YG ++ + R VD++ L +M+
Sbjct: 147 -------------------ENYC-ARND------IYGMMIQLHARHNQVDQARGLFFEMQ 180
Query: 165 EMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELS 224
E A YN ++ + G +++ DM +PP +Y +N+ GA
Sbjct: 181 EWRCKPDADIYNSLINAHARAGLWRWAINIMDDMLRAAIPPSRATYNNVVNACGAAGNWK 240
Query: 225 SMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNH 284
+ ++M ++ + D T++ V +S K+ Y
Sbjct: 241 KALELCKKM-IRNGVGPDLVTHNIV-----------------------LSAFKNGFQYTK 276
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKML---EEWE 341
++ EMMK G LN ++ LVK+G+ +A +L E
Sbjct: 277 ATGYF-------EMMK--GANIAPDTFTLN----IVIHCLVKVGQHGDAVDLLNSMREKR 323
Query: 342 LSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNME 401
+ C D I+ Y G +E AV +V +G P S++ + YA
Sbjct: 324 VQC-SPDVVTYTSIIHSYYVCGQVENCKAVFDMMVAEGVKPNIVSYNALLGAYASHGMHT 382
Query: 402 KAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRN--M 459
+AF K + ++N RP +++L+ G + E+ + ++ K N
Sbjct: 383 EAFGIFK----LLKQNGL-RPDVVSYTTLLNAYGRSAQPEKAREVFNEMRKNSCKPNKVS 437
Query: 460 YHALTEAHIRSG--QEVDGLLESMKADDIDED 489
Y+AL +A+ +G +E LL M+ D I D
Sbjct: 438 YNALIDAYGSAGMFKEAISLLHEMEKDGIPPD 469
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 128/297 (43%), Gaps = 27/297 (9%)
Query: 61 VLEGQKISELELQRV-----IRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
VLE K +EL V I S ++ AL++ M +A +V+ AV +++
Sbjct: 492 VLEAAKFRGIELNIVAYNSGIGSYLSFGDYEKALKLYATM----MASNVNPDAVTYNIL- 546
Query: 116 KVRGLESAETYFNSLND-EDKVD-------KLYGALLNCYVREGLVDESLSLMQKMKEMG 167
+ GL Y SL ED VD ++Y +L+ YV++ + E+ S MK G
Sbjct: 547 -ISGLCKLGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQDKLAEAESTFINMKASG 605
Query: 168 SFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSME 227
F L Y ++ YT+ G + D+ +M+ N + PD IC + A ++ +
Sbjct: 606 CFPDVLTYTAMIQAYTDHGSWTSVWDLFKEMEGNAILPDAI---ICSSLMEALNKGNQYG 662
Query: 228 NVLQEME--SQSHISMDWGTY-STVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNH 284
VLQ M+ I ++ Y +A+ ++ K + I + S S L N+
Sbjct: 663 RVLQLMKFMHDQCIQLNQKAYFEIIASCSMLRDWKTASEIIEHLDSSLPSISVGKL--NY 720
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWE 341
L++ G + MMK + C Y +L +L+ +G+ + ++L+ E
Sbjct: 721 LLNFLGKCGKTESMMKLFYKMVSSCSTVGLSTYKVLLRNLLAVGKWRKYVEVLQWME 777
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 86/417 (20%), Positives = 174/417 (41%), Gaps = 21/417 (5%)
Query: 76 IRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDK 135
I L R A ++ + M +G + + V + + ++ ++ A N + + +
Sbjct: 294 IHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNV 353
Query: 136 VDKLYGALLNCYVREGLVDESLSLM-QKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDV 194
V L+ L+N YV G +DE+ ++M + M +G YN ++ G ++
Sbjct: 354 V--LFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSAREL 411
Query: 195 LLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYI 254
+ +M+ G P+ +Y I I+ + L NVL EM + ++++ Y+ +
Sbjct: 412 MNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKG-LALNAVGYNC-----L 465
Query: 255 IAGL--KEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCK 310
I+ L EK L D+ SK D +N LI + +E + + ++
Sbjct: 466 ISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGV 525
Query: 311 KQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADA 370
Y T++ + ++ G ++EA K++ + D N ++ + G IEK A
Sbjct: 526 IANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLA 585
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSI 430
+ ++++ KG P S +I+ G N++ A E +++ + ++ P +S+
Sbjct: 586 LFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMI-----HRGLTPDIVTYNSL 640
Query: 431 LDWLGDNRDVEEVEAFVSSLKIK--VQKRNMYHALTEAHIRSGQEVDG-LLESMKAD 484
++ L +E L+++ Y+ L H + G D LL S D
Sbjct: 641 INGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVD 697
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 127/302 (42%), Gaps = 47/302 (15%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVL---L 196
Y L++ + +EG ++E+ +++ EM G ALN G CL + + EK+ D L
Sbjct: 427 YTILIDRFCKEGRLEEARNVLD---EMSGKGLALNAVGYNCLISALCKDEKVQDALNMFG 483
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
DM G PD F++ I ++ + Q+M + I+ + TY+T+ + ++
Sbjct: 484 DMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIA-NTITYNTLIHAFLRR 542
Query: 257 GLKEKAIIYLKKCEDIVSKSK--DALGYNHLISHYASLGN--------KDEMMKFWGLQK 306
G ++A LK D++ + D + YN LI GN +D M K
Sbjct: 543 GAMQEA---LKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNN 599
Query: 307 IKCKKQLN---------------RDYI------------TMLGSLVKIGELEEAEKMLEE 339
I C +N RD I +++ L K G +EA + ++
Sbjct: 600 ISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDK 659
Query: 340 WELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNN 399
++ C D N ++ + ++GM + A +L V G P +W I+ + + + +
Sbjct: 660 LQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 719
Query: 400 ME 401
E
Sbjct: 720 QE 721
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 105/244 (43%), Gaps = 4/244 (1%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
VLD+ +G ++ + +I L ++ + AL + MS +G + + +
Sbjct: 446 VLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLC 505
Query: 116 KVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
KV E A + + E + Y L++ ++R G + E+L L+ M G +
Sbjct: 506 KVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDI 565
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
YNG++ G EK + DM G+ P+N S I IN + L++M
Sbjct: 566 TYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDM 625
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLG 293
+ ++ D TY+++ N G ++A+ K + + DA+ YN LIS + G
Sbjct: 626 IHRG-LTPDIVTYNSLINGLCKTGRAQEALNLFDKLQ-VEGICPDAITYNTLISWHCKEG 683
Query: 294 NKDE 297
D+
Sbjct: 684 MFDD 687
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 59/332 (17%), Positives = 139/332 (41%), Gaps = 21/332 (6%)
Query: 88 ALQVSEWMSGQ-GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV--DKLYGALL 144
++++ +W Q G + + +D +G ++ + + E V + L+ ++
Sbjct: 94 SMELFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIM 153
Query: 145 NCYVREGLVDESLSLMQKMKEMGSFGSAL-NYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
Y R GL ++ L+ M+ + S +YN ++ + + +P+V +M G+
Sbjct: 154 KHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGI 213
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAI 263
P +++ + + + +E+ S +L++M + + Y T+ + G + +
Sbjct: 214 SPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVP-NAIVYQTLIHALXKVG-RVNEV 271
Query: 264 IYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGS 323
+ L + ++ D +N I + E K ++ + Y ++
Sbjct: 272 LKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHG 331
Query: 324 LVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL-----GYSQKGMIEKADAVLKE-IVK 377
L ++G+++EA +L + PN++L GY +G +++A AV+ E ++
Sbjct: 332 LCRMGKVDEARMLLNKVP---------NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLS 382
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
G P +++ + G K + A E M E
Sbjct: 383 VGCGPDIFTYNTLILGLCKKGYLVSARELMNE 414
>gi|359496212|ref|XP_003635178.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
mitochondrial-like [Vitis vinifera]
Length = 379
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 123/312 (39%), Gaps = 43/312 (13%)
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN- 201
L+ Y G+ D + L ++ ++ + +++N ++ N+ + +KI ++ N
Sbjct: 98 LMTLYGTAGMFDHAHKLFDELPKLNCERTVMSFNALLSACVNSKKFDKIDGFFQELPGNL 157
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
G+ PD SY I +N++ L S +VL EME
Sbjct: 158 GIVPDVVSYNILVNAFCEMGSLDSALSVLDEMEK-------------------------- 191
Query: 262 AIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITML 321
V D + +N L++ + G+ + K W L K R Y L
Sbjct: 192 -----------VGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKL 240
Query: 322 GSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKT 381
++ + EA ++++E + S D N ++ G+ G +E+A EI +
Sbjct: 241 RGVISENRMSEAVELIDEMKTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNELP 300
Query: 382 PTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVE 441
P ++ + +K + E A E KE + + W +P+L+ +L+ L +E
Sbjct: 301 PVRATYMTLIPFLVEKGDFEMATELCKEVCS-----RRWLIEPALLQQVLEGLVKESKIE 355
Query: 442 EVEAFVSSLKIK 453
E V K+K
Sbjct: 356 EATELVELEKLK 367
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 65/126 (51%), Gaps = 7/126 (5%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQH---EKIPDVLL 196
Y L+N + G +D +LS++ +M+++G + +N ++ + G + EKI D+
Sbjct: 166 YNILVNAFCEMGSLDSALSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDL-- 223
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
MK+N V P+ SY + + + +S ++ EM++ S I D T +++ + A
Sbjct: 224 -MKKNNVAPNVRSYNAKLRGVISENRMSEAVELIDEMKT-SGIKPDVFTLNSLMKGFCNA 281
Query: 257 GLKEKA 262
G E+A
Sbjct: 282 GNLEEA 287
>gi|357465315|ref|XP_003602939.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491987|gb|AES73190.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 126/273 (46%), Gaps = 7/273 (2%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSF-GSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
Y L++ R G + E+ L ++M L YN ++ + G+ ++ +V+ M
Sbjct: 312 YSTLMDGLCRNGRLKEAFELFEEMVSKDQIVPDPLTYNVLINGFCREGKADRARNVIEFM 371
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
K NG P+ F+Y ++ +L + VL EM+S S + D TY+++ N++ G
Sbjct: 372 KNNGCCPNVFNYSALVDGLCKAGKLQDAKGVLAEMKS-SGLKPDAITYTSLINFFSRNGQ 430
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKK-QLNR-D 316
++AI L + ++ ++ D + +N ++ G DE + ++K+ + LN+
Sbjct: 431 IDEAIELLTEMKENDCQA-DTVTFNVILGGLCREGRFDEALDM--IEKLPQQGVYLNKGS 487
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y +L SL + EL +A K+L + + N +L+ ++GM A L ++V
Sbjct: 488 YRIVLNSLTQNCELRKANKLLGLMLSRGFVPHYATSNELLVRLCKEGMANDAATALFDLV 547
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
G P +SW ++ + FE + E
Sbjct: 548 DMGFQPQHDSWELLIDLICRDRKLLYVFELLDE 580
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 171/390 (43%), Gaps = 45/390 (11%)
Query: 43 ISPLG--DP-DVSLTPVLDQWVLEGQKISELELQRV-IRQLRSRKRFKHALQVSEWMSGQ 98
ISPL P + L P + V E +K S+ V I ++ K +HAL++ +S Q
Sbjct: 100 ISPLNFTKPLEPKLDPPPEIVVAETRKKSKYITHDVAINLIKREKDPQHALKIFNMVSEQ 159
Query: 99 -GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLY-GALLN-------CYVR 149
G + +A L + + + ++ + + + E K + G +N C
Sbjct: 160 KGFNHNNATYATILQKLAQFKKFQAVDRVLHQMTYE--ACKFHEGVFINLMKHYSKCGFH 217
Query: 150 EGLVDESLSLMQKMKEMGS---FGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV-PP 205
E + D LS+ ++E S S LN L ++ Q + + +LL K + V P
Sbjct: 218 EKVFDAFLSIQTIVREKPSPKAISSCLN------LLVDSNQVDLVRKLLLYAKRSLVYKP 271
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG-LKEKAII 264
+ + I + + R ++ S V++EM + + + TYST+ + G LKE +
Sbjct: 272 NVCIFNILVKYHCRRGDIDSAFEVVKEMRNSKYSYPNVITYSTLMDGLCRNGRLKEAFEL 331
Query: 265 YLKKCEDIVSKSK---DALGYNHLISHYASLGNKD------EMMKFWGLQKIKCKKQLNR 315
+ E++VSK + D L YN LI+ + G D E MK G C N
Sbjct: 332 F----EEMVSKDQIVPDPLTYNVLINGFCREGKADRARNVIEFMKNNGC----CPNVFN- 382
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
Y ++ L K G+L++A+ +L E + S D ++ +S+ G I++A +L E+
Sbjct: 383 -YSALVDGLCKAGKLQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQIDEAIELLTEM 441
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
+ ++++I G + ++A +
Sbjct: 442 KENDCQADTVTFNVILGGLCREGRFDEALD 471
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 147/348 (42%), Gaps = 20/348 (5%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I + K A + M +G++ V + + V ++ A FN + E+
Sbjct: 218 IIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFEN 277
Query: 135 KVDKLY--GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+Y L++ + +E + E+ +++ M + G YN +M Y + K
Sbjct: 278 INPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAK 337
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
+ + + GV P+ SY I I+ + ++ N+ +EM + I D TY+++ +
Sbjct: 338 HIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIP-DVVTYNSLIDG 396
Query: 253 YIIAGLKEKAIIYLKKCED--------IVSKSKDALGYNHLISHYASLGNKDEMMKFWGL 304
G A+ + + D + DAL NH + +L K MK G+
Sbjct: 397 LCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTK---MKDEGI 453
Query: 305 QKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGM 364
Q C Y T++ L K G LE+A + E+ + Y D + ++ G+ G+
Sbjct: 454 QPDICT------YTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGL 507
Query: 365 IEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
+++ +L ++ + G P ++ II DK+ +KA + ++E +
Sbjct: 508 FDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMIT 555
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 77/172 (44%), Gaps = 3/172 (1%)
Query: 34 VARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSE 93
V N+L + LG +L ++D+ G ++ ++ L + A+ +
Sbjct: 388 VTYNSLIDGLCKLGKISYALK-LVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLT 446
Query: 94 WMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV--DKLYGALLNCYVREG 151
M +G+ + + +D + K LE A F L + + +Y A++ + G
Sbjct: 447 KMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHG 506
Query: 152 LVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
L DESL L+ KM+E G +A+ Y I+C + +++K +L +M G+
Sbjct: 507 LFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 113/273 (41%), Gaps = 14/273 (5%)
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGI---MCLYTNTGQHEKIPDVLLDMK 199
L+NC+ + G S S++ K+ +MG + + + +CL Q + D ++ +
Sbjct: 113 LINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVAL- 171
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G + SY IN + S+ +L+ ++ + + + Y+T+ + L
Sbjct: 172 --GFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKL-VQPNVVMYNTIIDSMCKVKLV 228
Query: 260 EKAI-IYLKKCEDIVSK--SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
+A +Y ++VSK S D + YN LIS + +G + + +
Sbjct: 229 NEAFDLY----SEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYT 284
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
+ ++ K L+EA+ +L D N ++ Y + KA + I
Sbjct: 285 FNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTIS 344
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
++G P +S+SI+ G+ +++A KE
Sbjct: 345 QRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKE 377
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/386 (19%), Positives = 161/386 (41%), Gaps = 47/386 (12%)
Query: 91 VSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV---DKLYGALLNCY 147
V ++MS +G++ +V + + + K ++ AE + +E + ++ YG L++ Y
Sbjct: 283 VLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGY 342
Query: 148 VREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDN 207
R G +D+++ L+ +M +G + N ++ Y G+ + V+ M + + PD+
Sbjct: 343 CRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDS 402
Query: 208 FSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLK 267
+SY ++ Y S N+ +M + G TV
Sbjct: 403 YSYNTLLDGYCREGHTSEAFNLCDKM-------LQEGIEPTV------------------ 437
Query: 268 KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKI 327
L YN L+ +G D+ ++ W L + Y T+L L K+
Sbjct: 438 ------------LTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKM 485
Query: 328 GELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSW 387
E A + ++ + N ++ G + G + +A+ + ++ G +P ++
Sbjct: 486 ENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITY 545
Query: 388 SIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFV 447
+ GY +N+ +AF+ +K A+ E + P + +S++ L +R + EV +
Sbjct: 546 RTLIDGYCKASNVGQAFK-VKGAM----EREPISPSIEMYNSLISGLFKSRRLVEVTDLL 600
Query: 448 SSLKIKVQKRNM--YHALTEAHIRSG 471
+ + I+ N+ Y AL + + G
Sbjct: 601 TEMGIRGLTPNIVTYGALIDGWCKEG 626
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 118/267 (44%), Gaps = 3/267 (1%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
++ +L YV +GL +L + M + G S + N ++ G+ V M
Sbjct: 158 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 217
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
G+ PD F I +N++ ++ +++ME+ + + TY ++ N Y+ G
Sbjct: 218 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLG-VEPNIVTYHSLINGYVSLGD 276
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFW-GLQKIKCKKQLNRDY 317
E A LK + S++ + Y LI Y DE K G+Q+ R Y
Sbjct: 277 VEAAKGVLKFMSE-KGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAY 335
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
++ + G++++A ++L+E + + N ++ GY ++G I +A+ V+ +V
Sbjct: 336 GVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVD 395
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAF 404
P S++ + GY + + +AF
Sbjct: 396 WNLKPDSYSYNTLLDGYCREGHTSEAF 422
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 122/281 (43%), Gaps = 23/281 (8%)
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
++N + ++G VDE+ ++KM+ +G + + Y+ ++ Y + G E VL M E G
Sbjct: 232 MVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKG 291
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
V + +Y + I Y + ++ E VL+ M+ ++ + D Y + + Y G + A
Sbjct: 292 VSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDA 351
Query: 263 IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEM------MKFWGLQKIKCKKQLNRD 316
+ L + + K+ + N LI+ Y G E M W L K +
Sbjct: 352 VRLLDEMLRLGLKT-NLFICNSLINGYCKRGEIHEAEGVITRMVDWNL------KPDSYS 404
Query: 317 YITMLGSLVKIGELEEA----EKMLEEW-ELSCYCYDFRVPNIILLGYSQKGMIEKADAV 371
Y T+L + G EA +KML+E E + Y N +L G + G + A +
Sbjct: 405 YNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTY-----NTLLKGLCRVGAFDDALQI 459
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
++K+G P +S + G N E A K+ LA
Sbjct: 460 WHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILA 500
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 95/489 (19%), Positives = 197/489 (40%), Gaps = 80/489 (16%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
+ D+ + EG + + L +++ L F ALQ+ M +G+A ++ LD +
Sbjct: 424 LCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLF 483
Query: 116 KVRGLESAETYFNSL--NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
K+ E A T + + K + +++ + G + E+ + KMK++G +
Sbjct: 484 KMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGI 543
Query: 174 NYNGIM---CLYTNTGQHEKI--------------------------------PDVLLDM 198
Y ++ C +N GQ K+ D+L +M
Sbjct: 544 TYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEM 603
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
G+ P+ +Y I+ + L + EM +++ +S + ST+ + G
Sbjct: 604 GIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEM-TENGLSANIIICSTMVSGLYRLGR 662
Query: 259 KEKAIIYLKKCED------------------IVSKSKDALG-------------YNHLIS 287
++A + ++K D + K D+L YN I+
Sbjct: 663 IDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIA 722
Query: 288 HYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCY 347
G D+ +F+ + +K N Y T++ G ++EA ++ +E
Sbjct: 723 GLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVP 782
Query: 348 DFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECM 407
+ N ++ G + +++A + ++ +KG P +++ + GY NM+ AF+ +
Sbjct: 783 NIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFK-L 841
Query: 408 KEALAVHEENKFWRPKPSLV--SSILDWLGDNRDVEEVEAFVSSL-KIKVQKRNM-YHAL 463
K+ + EE PS+V S++++ L + D+E ++ + K V + + Y L
Sbjct: 842 KDKMI--EEG----ISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTL 895
Query: 464 TEAHIRSGQ 472
+ +IRSG+
Sbjct: 896 VQGYIRSGE 904
Score = 42.0 bits (97), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 111/270 (41%), Gaps = 37/270 (13%)
Query: 149 REGLVDESLSLMQKMKEMGSFG-------SALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
R G +DE+ LMQKM + G F S + Y I +KI D L + +
Sbjct: 659 RLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAI----------QKIADSLDESCKT 708
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
+ P+N Y I I ++ + + + D TY T+ + Y AG ++
Sbjct: 709 FLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVP-DNFTYCTLIHGYSAAGNVDE 767
Query: 262 AIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR--DY 317
A + ++++ + + + YN LI+ N D + + K+ K Y
Sbjct: 768 A---FRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLF--HKLHQKGLFPNVVTY 822
Query: 318 ITMLGSLVKIGELEEA----EKMLEEW-ELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
T++ KIG ++ A +KM+EE S Y + ++ G + G IE++ +L
Sbjct: 823 NTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTY-----SALINGLCKHGDIERSMKLL 877
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEK 402
+++K G + + GY M+K
Sbjct: 878 NQMIKAGVDSKLIEYCTLVQGYIRSGEMQK 907
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 52/122 (42%), Gaps = 1/122 (0%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y AL+N + VD + L K+ + G F + + YN ++ Y G + + M
Sbjct: 787 YNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMI 846
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E G+ P +Y IN ++ +L +M ++ + Y T+ YI +G
Sbjct: 847 EEGISPSVVTYSALINGLCKHGDIERSMKLLNQM-IKAGVDSKLIEYCTLVQGYIRSGEM 905
Query: 260 EK 261
+K
Sbjct: 906 QK 907
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 146/324 (45%), Gaps = 23/324 (7%)
Query: 159 LMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYG 218
L++++ ++ + +N ++ G+ + + + MK G PD +Y I+ YG
Sbjct: 187 LVRRLFDLLPVPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYG 246
Query: 219 ARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLK--KCEDIVSKS 276
+L +E ++ EM +S + D TY+ + N + G EKA Y K + +V+
Sbjct: 247 KCGDLEEVEQLVSEMR-KSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVA-- 303
Query: 277 KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKM 336
+ + ++ + + G E MK + +++ Y +++ K G L++A +
Sbjct: 304 -NVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVL 362
Query: 337 LEEWELSCYCYDFRVPNIILL-----GYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIA 391
L+E + VPN++ G ++G + +AD VL + + G ++ +
Sbjct: 363 LDEM-----VHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLI 417
Query: 392 AGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK 451
G+ NN E+A + + + +NK SL +++ L ++ V+E ++ + +
Sbjct: 418 HGHFMNNNSERALDLLNQM-----KNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMA 472
Query: 452 IKVQKRN--MYHALTEAHIRSGQE 473
+ N +Y + +A ++G+E
Sbjct: 473 GCGLRPNTVIYTTIMDALFKAGKE 496
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 74/357 (20%), Positives = 148/357 (41%), Gaps = 24/357 (6%)
Query: 59 QWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVR 118
Q + G +E ++ R A+ + + M QGL +V + V +D + K
Sbjct: 330 QMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEG 389
Query: 119 GLESAETYFNSLNDEDKV---DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNY 175
+ A+ SL + V + LY L++ + + +L L+ +MK G Y
Sbjct: 390 KVAEADNVL-SLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLY 448
Query: 176 NGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSY---GARSELSSMENVLQE 232
++ + ++ +L M G+ P+ Y +++ G SE ++ + + +
Sbjct: 449 GTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILD 508
Query: 233 MESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASL 292
Q ++ TY + + AG +AI + K ++ + Y LI + +
Sbjct: 509 SGFQPNVV----TYCALIDGLCKAGSISEAISHFNKMREL-GLDPNVQAYTALIDGFCKI 563
Query: 293 GNKDEMMKFWGLQKIKCKKQLNRD-YITMLGSLVKIGELEEA----EKMLEE-WELSCYC 346
G+ ++ M + I L++ Y +++ +K L++A KM+E +L YC
Sbjct: 564 GSLNKAMHLMN-EMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYC 622
Query: 347 YDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
Y + G+ M+++A VL E++ G TP ++ + Y NME+A
Sbjct: 623 Y-----TCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEA 674
Score = 41.6 bits (96), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 12/144 (8%)
Query: 99 GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE----DKVDKLYGALLNCYVREGLVD 154
GL +V + +D K+ L A N + D+ DKV +Y +L++ Y+++ +
Sbjct: 545 GLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKV--VYTSLIDGYMKQANLQ 602
Query: 155 ESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICI 214
++ +L KM E G Y + + N ++ VL +M G+ PD Y I
Sbjct: 603 DAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLI 662
Query: 215 NSY---GARSELSSMENVLQEMES 235
Y G E SS++N EMES
Sbjct: 663 RKYQKLGNMEEASSLQN---EMES 683
>gi|359496222|ref|XP_002263756.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g13150-like [Vitis vinifera]
Length = 379
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/312 (20%), Positives = 125/312 (40%), Gaps = 43/312 (13%)
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN- 201
L+ Y + G+ + + L ++ ++ + +++N ++ + N+ + +KI ++ N
Sbjct: 98 LMTLYGKAGMFEHAHKLFDELPKLNCERTVVSFNALLSVCVNSKKFDKIDGFFQELPGNL 157
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
GV PD SY I +N++ L S +VL EME
Sbjct: 158 GVVPDVVSYNIIVNAFCEMGSLDSALSVLDEMEK-------------------------- 191
Query: 262 AIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITML 321
V D + +N L++ + G+ + K W L K R Y L
Sbjct: 192 -----------VGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKL 240
Query: 322 GSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKT 381
++ + EA ++++E + S D N ++ G+ G +E+A EI +
Sbjct: 241 RGVISENRMSEAVELIDEMKTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNELP 300
Query: 382 PTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVE 441
P ++ + +K + + A E KE + + W +P+L+ +L+ L +E
Sbjct: 301 PVRATYMTLIPFLVEKGDFDMATELCKEVCS-----RRWLIEPALLQQVLEGLVKESKIE 355
Query: 442 EVEAFVSSLKIK 453
E V K+K
Sbjct: 356 EATELVELAKLK 367
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 104/225 (46%), Gaps = 24/225 (10%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQH---EKIPDVLL 196
Y ++N + G +D +LS++ +M+++G + +N ++ + G + EKI D+
Sbjct: 166 YNIIVNAFCEMGSLDSALSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDL-- 223
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
MK+N V P+ SY + + + +S ++ EM++ S I D T +++ + A
Sbjct: 224 -MKKNNVAPNVRSYNAKLRGVISENRMSEAVELIDEMKT-SGIKPDVFTLNSLMKGFCNA 281
Query: 257 G-LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR 315
G L+E Y + + + + Y LI G+ D + CK+ +R
Sbjct: 282 GNLEEAKRWYSEIARNELPPVRAT--YMTLIPFLVEKGDFDMATEL-------CKEVCSR 332
Query: 316 DYIT-------MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPN 353
++ +L LVK ++EEA +++E +L + +P+
Sbjct: 333 RWLIEPALLQQVLEGLVKESKIEEATELVELAKLKKFRITLELPS 377
>gi|357120957|ref|XP_003562190.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Brachypodium distachyon]
Length = 454
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 117/261 (44%), Gaps = 10/261 (3%)
Query: 83 KRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGL-ESAETYFNSLNDEDKVDKLY- 140
+RF V + MS G+ +V H +D GK L E N L D D V +Y
Sbjct: 179 RRFDLIPPVLDEMSYLGIGCNVVIHNAIIDGYGKAGMLAEMGTALCNMLEDGDNVPDIYT 238
Query: 141 -GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+++ Y G VD+ + + MG + +N ++ Y HEK+ VL MK
Sbjct: 239 MNSIIWAYGNRGRVDDMEKWYSEFQLMGVEPDSRTFNIMIKSYGKANMHEKMMMVLKYMK 298
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
P ++ I I +G ++ ME + M+ Q I + TY ++ N Y AG+
Sbjct: 299 RRFFSPTAATFNIIIECFGRAGDIEKMEYYFRLMKIQG-IKPNPITYCSLVNGYSKAGIL 357
Query: 260 EK--AIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
+K AII + D+V D +N +I+ YA G+ M + L K K K Y
Sbjct: 358 DKVPAIIRQTENTDVV---LDTPFFNCVINAYAKSGDIKIMEEMLQLMKEKKCKPGKVIY 414
Query: 318 ITMLGSLVKIGELEEAEKMLE 338
TM+ + + G ++EA K+LE
Sbjct: 415 TTMIQAYIAHG-MDEAAKLLE 434
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 88/403 (21%), Positives = 162/403 (40%), Gaps = 49/403 (12%)
Query: 85 FKHALQVSEWMSGQG-LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDK---LY 140
++ AL++ E M Q +A L ++GK R A F + E+++ +Y
Sbjct: 73 WESALEIFELMRKQRWYEPRTRTYARLLMMLGKCRQPGPAAALFRVMLSEERLAPTVDVY 132
Query: 141 GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKE 200
AL+ Y G++DE+L+ ++ MK G+A D K
Sbjct: 133 TALVGAYGYSGMLDEALATVELMK-----GAA------------------------DCK- 162
Query: 201 NGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG-LK 259
PD +++ I IN + VL EM S I + ++ + + Y AG L
Sbjct: 163 ----PDEYTFSILINCCCKSRRFDLIPPVLDEM-SYLGIGCNVVIHNAIIDGYGKAGMLA 217
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
E ED D N +I Y + G D+M K++ ++ + +R +
Sbjct: 218 EMGTALCNMLED-GDNVPDIYTMNSIIWAYGNRGRVDDMEKWYSEFQLMGVEPDSRTFNI 276
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
M+ S K E+ +L+ + + NII+ + + G IEK + + + +G
Sbjct: 277 MIKSYGKANMHEKMMMVLKYMKRRFFSPTAATFNIIIECFGRAGDIEKMEYYFRLMKIQG 336
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRD 439
P P ++ + GY+ ++K A+ EN + +++ + D
Sbjct: 337 IKPNPITYCSLVNGYSKAGILDKV-----PAIIRQTENTDVVLDTPFFNCVINAYAKSGD 391
Query: 440 VEEVEAFVSSLKIKVQK--RNMYHALTEAHIRSGQ-EVDGLLE 479
++ +E + +K K K + +Y + +A+I G E LLE
Sbjct: 392 IKIMEEMLQLMKEKKCKPGKVIYTTMIQAYIAHGMDEAAKLLE 434
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 127/275 (46%), Gaps = 20/275 (7%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+ +EG V+E L ++M G YN ++ N G+ E+ + + K
Sbjct: 480 YNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECK 539
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+NG PD ++Y I I+ Y + + E + QEM + I + Y T+ Y G
Sbjct: 540 KNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMK-IEQNAVVYGTLIRAYCENGNM 598
Query: 260 EKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLG-----NK--DEMMKFWGLQKIKCK 310
+A + +D+ S+ + + Y+ LI +++G N+ DEM K + C
Sbjct: 599 REA---FRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVC- 654
Query: 311 KQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADA 370
Y ++G K+G++ + + +L+E ++ + I++ G+ + G ++ A
Sbjct: 655 ------YTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAK 708
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
+L E+ +KG P +++ + G+ + ME+A +
Sbjct: 709 LLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALK 743
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 161/359 (44%), Gaps = 23/359 (6%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
YG L+N V+ DE+ ++++M + G + + YN ++ Y G + DM
Sbjct: 270 YGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMI 329
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
NG+ P++ + I Y +++ E++L+EM + + ++ GT+++V + +
Sbjct: 330 SNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGV-INQGTFTSVIHRLCLKCRF 388
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWG--LQKIKCKKQLNRDY 317
+ A++++ + K D L L+S G + E ++ W L+K + +
Sbjct: 389 DSALLFIMEMLLRNFKPNDGL-LTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSN- 446
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
++ L + G EEA K+L+E D N ++L ++G +E+ + +E+V+
Sbjct: 447 -ALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVR 505
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKA----FECMKEALAVHEENKFWRPKPSLVSSILDW 433
+G P +++++ G + +E+A EC K F P ++D
Sbjct: 506 RGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNG-------NF--PDAYTYGIMIDG 556
Query: 434 LGDNRDVEEVEA-FVSSLKIKV-QKRNMYHALTEAHIRSG--QEVDGLLESMKADDIDE 488
VEE E F + +K+ Q +Y L A+ +G +E L + M++ I +
Sbjct: 557 YCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQ 615
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 3/175 (1%)
Query: 239 ISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEM 298
++ D +ST+ N + G + AI +K E V + + + YN++I G DE
Sbjct: 193 VTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEK-VGVAPNVVTYNNIIHGLCKNGRLDEA 251
Query: 299 MKF-WGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL 357
+F ++K + K L Y ++ LVK+ +EA +L+E Y + V N ++
Sbjct: 252 FQFKEKMEKERVKPSL-VTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLID 310
Query: 358 GYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
GY + G I A + +++ G +P + + + GY N ME A ++E L
Sbjct: 311 GYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLT 365
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 80/391 (20%), Positives = 157/391 (40%), Gaps = 8/391 (2%)
Query: 22 EIFTRAYRAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRS 81
E+ R Y A V N L +G+ +L + D + G + + +I+
Sbjct: 292 EMSDRGY-APNNVVYNTLIDGYCRIGNISTALQ-IRDDMISNGISPNSVTCNSLIQGYCK 349
Query: 82 RKRFKHALQV-SEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNS--LNDEDKVDK 138
+ +HA + E ++G G+ +V L K R +SA + L + D
Sbjct: 350 SNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCR-FDSALLFIMEMLLRNFKPNDG 408
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
L L++ + G E++ L ++ E G + + N ++ G E+ +L +M
Sbjct: 409 LLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEM 468
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
E G+ D+ SY I + ++ + +EM + I D TY+ + + G
Sbjct: 469 LERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRG-IQPDMYTYNMLLHGLCNMGK 527
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
E+A +C+ DA Y +I Y +E K + +Q Y
Sbjct: 528 IEEAGGLWHECKK-NGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYG 586
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
T++ + + G + EA ++ ++ + ++ G S G+++ A+ +L E+ K+
Sbjct: 587 TLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKE 646
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
G +P ++ + GY M K ++E
Sbjct: 647 GLSPNVVCYTALIGGYCKLGQMHKVDSILQE 677
>gi|356547370|ref|XP_003542086.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 628
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 140/315 (44%), Gaps = 9/315 (2%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
++R+ S + A+QV + M G + LD + K ++ A + F L
Sbjct: 172 LMRRFASARMVHKAVQVLDEMPNYGCEPDEYVFGCLLDALRKNGSVKEAASLFEELRYRW 231
Query: 135 KVD-KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPD 193
K K + +LL + +EG + E+ ++ +MK+ G + YN ++ Y + D
Sbjct: 232 KPSVKHFTSLLYGWCKEGKLMEAKHVLVQMKDAGIEPDIVVYNNLLGGYAQADKMGDAYD 291
Query: 194 VLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYY 253
+L +M+ G P+ SY + I S L V EM+ ++ D TYST+ + +
Sbjct: 292 LLKEMRRKGCEPNATSYTVLIQSLCKHERLEEATRVFVEMQ-RNGCQADLVTYSTLISGF 350
Query: 254 IIAGLKEKAIIYLKKCEDIVSKS--KDALGYNH-LISHYASLGNKDEMMKFWGLQKIKCK 310
G ++ L ++++ + + + Y H +++H ++ +QKI C
Sbjct: 351 CKWGKIKRGYELL---DEMIQQGHFPNQVIYQHIMVAHEKKEELEECKELVNEMQKIGCA 407
Query: 311 KQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADA 370
L+ Y T++ K+GE++E ++ E E S I++ G+ ++G + +A
Sbjct: 408 PDLS-IYNTVIRLACKLGEVKEGVRLWNEMESSGLSPSIDTFVIMINGFLEQGCLVEACE 466
Query: 371 VLKEIVKKGKTPTPN 385
KE+V +G P
Sbjct: 467 YFKEMVGRGLFAAPQ 481
Score = 38.5 bits (88), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 93/213 (43%), Gaps = 18/213 (8%)
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
K++G D+ +Y+ I + ++ +++EM ++ + + + + A +
Sbjct: 122 KQSGHRLDHDAYKAMIKVLSRMRQFGAVWALIEEMRQENPHLITPQVFVILMRRFASARM 181
Query: 259 KEKAIIYLKK-----CED---IVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCK 310
KA+ L + CE + DAL N + ASL +E+ W
Sbjct: 182 VHKAVQVLDEMPNYGCEPDEYVFGCLLDALRKNGSVKEAASLF--EELRYRW-------- 231
Query: 311 KQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADA 370
K + + ++L K G+L EA+ +L + + + D V N +L GY+Q + A
Sbjct: 232 KPSVKHFTSLLYGWCKEGKLMEAKHVLVQMKDAGIEPDIVVYNNLLGGYAQADKMGDAYD 291
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
+LKE+ +KG P S++++ +E+A
Sbjct: 292 LLKEMRRKGCEPNATSYTVLIQSLCKHERLEEA 324
>gi|449447783|ref|XP_004141647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g73710-like [Cucumis sativus]
Length = 1020
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 136/301 (45%), Gaps = 12/301 (3%)
Query: 111 LDLIGKVRGLESAETYFNS-LNDEDKVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGS 168
+DL GK L+ A F L +D + + ++ G + E+ +L+ KM+E G
Sbjct: 328 IDLYGKAGRLKDAANVFGEMLTTGISMDTITFNTMIYTCGSHGHLAEAETLLLKMEERGL 387
Query: 169 FGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMEN 228
YN + LY N G + ++E G+ PD ++R ++ R+ + +EN
Sbjct: 388 SPDTKTYNIFLSLYANNGNIDGALKCYRRIREVGLFPDVVTHRALLHVLSERNMVEDVEN 447
Query: 229 VLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKK--CEDIVSKSKDALGYNHLI 286
V+ EME +SHI +D + V YI GL ++A I L+K + +S A +I
Sbjct: 448 VIAEME-KSHILLDEHSLPRVIKMYINEGLLDRAKILLEKYRLDTELSPRISA----AII 502
Query: 287 SHYASLG--NKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSC 344
YA G + E + W + + KK +Y M+ + K E+A + + +
Sbjct: 503 DAYAEKGLWFEAESIFLWK-RDLSGKKMDVMEYNVMIKAYGKAELYEKAFLLFKSMKNRG 561
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
D N ++ +S ++++A +L E+ + G PT ++S + A YA M A
Sbjct: 562 TWPDECTYNSLIQMFSGGDLVDEARRLLTEMQRMGFKPTCQTFSAVIASYARLGLMSDAV 621
Query: 405 E 405
E
Sbjct: 622 E 622
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 139/342 (40%), Gaps = 15/342 (4%)
Query: 99 GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDK--VDKLYGALLNCYVREGLVDES 156
G V ++ V + GK E A F S+ + + Y +L+ + LVDE+
Sbjct: 526 GKKMDVMEYNVMIKAYGKAELYEKAFLLFKSMKNRGTWPDECTYNSLIQMFSGGDLVDEA 585
Query: 157 LSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINS 216
L+ +M+ MG + ++ ++ Y G +V M V P+ Y + +N
Sbjct: 586 RRLLTEMQRMGFKPTCQTFSAVIASYARLGLMSDAVEVYDMMVHADVEPNEILYGVLVNG 645
Query: 217 YGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY--LKKCEDIVS 274
+ + + ME S + + + L++ IY +K ED
Sbjct: 646 FAEIGQAEEALKYFRLMEKSGIAENQIVLTSLIKAFSKVGSLEDARRIYNRMKNMED--- 702
Query: 275 KSKDALGYNHLISHYASLGNKDEMMK-FWGLQKIKCKKQLNRDYITMLGSLVKIGELEEA 333
D + N +I+ YA LG E + F L++ ++ + TM+ IG L+EA
Sbjct: 703 -GADTIASNSMINLYADLGMVSEAKQVFEDLRERGYADGVS--FATMIYLYKNIGMLDEA 759
Query: 334 EKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAG 393
++ EE + S D ++ Y+ G + + +L E+V + P +++++
Sbjct: 760 IEVAEEMKESGLLRDATSFRKVIECYAINGQVRECGELLHEMVTRKLLPDNRTFNVLFTI 819
Query: 394 YADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLG 435
+A ++ A HEE + R ++++++ LG
Sbjct: 820 LKKGVIPLEAVSQLESAF--HEEKTYAR--QAIIAAVFSGLG 857
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 159/387 (41%), Gaps = 71/387 (18%)
Query: 73 QRVIRQLRSRKRFKHALQVSEWMSGQ-GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLN 131
Q VI L+ + R++ +QV +W Q +V + + L +G+ + + +N +
Sbjct: 131 QTVI--LKEQSRWERVIQVFQWFKSQKDYVPNVIHYNIVLRTLGQAQKWDELRLCWNEMA 188
Query: 132 DEDKV--DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHE 189
+ V + YG L++ Y + GLV E+L ++ M G F + N ++ + + G+ +
Sbjct: 189 ENGVVPTNNTYGMLIDVYGKVGLVKEALLWIKHMTVRGIFPDEVTMNTVVRVLKDAGEFD 248
Query: 190 -----------------------KIPDVLLDMKENGVPPDNF------------------ 208
++ D ++ + P +F
Sbjct: 249 SADKFYKDWCRGLVELNDFDLNSRVEDFGVNSAVEPITPKHFLLTELFRIGTRIPNRKVS 308
Query: 209 --------------SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYI 254
+Y I+ YG L NV EM + + ISMD T++T+
Sbjct: 309 PEVDNCVRKPRLTSTYNTLIDLYGKAGRLKDAANVFGEMLT-TGISMDTITFNTMIYTCG 367
Query: 255 IAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN 314
G +A L K E+ S D YN +S YA+ GN D +K + ++I+ + L
Sbjct: 368 SHGHLAEAETLLLKMEE-RGLSPDTKTYNIFLSLYANNGNIDGALKCY--RRIR-EVGLF 423
Query: 315 RDYIT---MLGSLVKIGELEEAEKMLEEWELSCYCYD-FRVPNIILLGYSQKGMIEKADA 370
D +T +L L + +E+ E ++ E E S D +P +I + Y +G++++A
Sbjct: 424 PDVVTHRALLHVLSERNMVEDVENVIAEMEKSHILLDEHSLPRVIKM-YINEGLLDRA-K 481
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADK 397
+L E + +P + I YA+K
Sbjct: 482 ILLEKYRLDTELSPRISAAIIDAYAEK 508
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 100/229 (43%), Gaps = 9/229 (3%)
Query: 111 LDLIGKVRGLESAETYFNSLNDEDKVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGSF 169
++L + + A+ F L + D + + ++ Y G++DE++ + ++MKE G
Sbjct: 713 INLYADLGMVSEAKQVFEDLRERGYADGVSFATMIYLYKNIGMLDEAIEVAEEMKESGLL 772
Query: 170 GSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENV 229
A ++ ++ Y GQ + ++L +M + PDN ++ + + + +E V
Sbjct: 773 RDATSFRKVIECYAINGQVRECGELLHEMVTRKLLPDNRTFNVLFTIL--KKGVIPLEAV 830
Query: 230 LQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSK--DALGYNHLIS 287
Q +ES H + + +A + GL A L+ C+ + D+ YN I
Sbjct: 831 SQ-LESAFHEEKTYARQAIIAAVFSGLGLHASA---LESCDTFLKAEVQLDSFAYNVAIY 886
Query: 288 HYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKM 336
Y + D+ + + K + K YI ++G K G +E +++
Sbjct: 887 AYGAAEKIDKALNIFMKMKDQNLKPDLVTYINLVGCYGKAGMIEGVKQI 935
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 96/468 (20%), Positives = 196/468 (41%), Gaps = 31/468 (6%)
Query: 29 RAVKPVARNNLYSRISPLGDPDVSLTPVLDQW---VLEGQKISELELQRVIRQLRSRKRF 85
RA V+ +L R+S D+ L +D + V S ++ R++ + K++
Sbjct: 42 RASSSVSGGDLRERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKY 101
Query: 86 KHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSL----NDEDKVDKLYG 141
+ + + M G+ ++ + ++ + A + + + D+V G
Sbjct: 102 DVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVT--IG 159
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
+L+N + R V +++SL+ KM E+G + YN I+ T + D +++
Sbjct: 160 SLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK 219
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG--LK 259
G+ P+ +Y +N S S +L +M + I+ + TYS + + ++ G L+
Sbjct: 220 GIRPNVVTYTALVNGLCNSSRWSDAARLLSDM-IKKKITPNVITYSALLDAFVKNGKVLE 278
Query: 260 EKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
K + E++V S D + Y+ L++ DE + + L K Y
Sbjct: 279 AKELF-----EEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSY 333
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
T++ K +E+ K+ E + N ++ G+ Q G ++KA ++
Sbjct: 334 NTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDF 393
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLV--SSILDWLG 435
G +P +++I+ G D +EK AL + E+ + +V ++++ +
Sbjct: 394 FGISPDIWTYNILLGGLCDNGELEK-------ALVIFEDMQKREMDLDIVTYTTVIRGMC 446
Query: 436 DNRDVEEVEAFVSSLKIKVQKRNMYHALTEAHIRSGQEVDGLLESMKA 483
VEE + SL +K K ++ +T + SG GLL ++A
Sbjct: 447 KTGKVEEAWSLFCSLSLKGLKPDI---VTYTTMMSGLCTKGLLHEVEA 491
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 112/247 (45%), Gaps = 16/247 (6%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGI---MCLYTNTGQHEKIPDVLL 196
Y ALL+ +V+ G V E+ L ++M M + Y+ + +CL+ + ++ D+
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDL-- 320
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
M G D SY IN + + + +EM + +S + TY+T+ + A
Sbjct: 321 -MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS-NTVTYNTLIQGFFQA 378
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDE-MMKFWGLQKIKCKKQLNR 315
G +KA + + D S D YN L+ G ++ ++ F +QK ++++
Sbjct: 379 GDVDKAQEFFSQ-MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQK----REMDL 433
Query: 316 D---YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
D Y T++ + K G++EEA + L D ++ G KG++ + +A+
Sbjct: 434 DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALY 493
Query: 373 KEIVKKG 379
++ ++G
Sbjct: 494 TKMKQEG 500
>gi|297847016|ref|XP_002891389.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337231|gb|EFH67648.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 371
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 81/153 (52%), Gaps = 4/153 (2%)
Query: 57 LDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSV--HDHAVQLDLI 114
L++W G ++ ++ ++ RS ++F AL+ SEWM Q + F+V D+A +L+L+
Sbjct: 71 LERWRELGDQVKPSYVRGLVEDFRSTEQFSKALEASEWMCEQRV-FNVFPEDYAARLNLV 129
Query: 115 GKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVR-EGLVDESLSLMQKMKEMGSFGSAL 173
V GLE AE +F + + + +Y LL Y + E +D++ +KM+++G
Sbjct: 130 ETVLGLEEAEKFFERIPENMRDYSVYENLLRSYTKSEKTLDKAEDTFEKMRDLGFLSKPS 189
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPD 206
++ ++ LY + + + + +M EN V D
Sbjct: 190 PFDTMISLYRKLNKRDMVKKLKYEMMENNVKID 222
>gi|356540375|ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Glycine max]
Length = 1476
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 149/371 (40%), Gaps = 54/371 (14%)
Query: 3 SKLFSTIFN--NKRNFTKTNLEIFTRA----------YRAVKPV-ARNNLYSRISPLGD- 48
+++ +TI K N +EIF RA Y A+ V ARN +S++ L D
Sbjct: 215 ARMVATILGVLGKANQEALAVEIFARAESSVGDTVQVYNAMMGVYARNGRFSKVKELLDL 274
Query: 49 -------PD-VSLTPVLDQWVLEGQKISELELQRVIRQLRSRKR---------------- 84
PD VS +++ + G L LQ + RS R
Sbjct: 275 MRERGCVPDLVSFNTLINARMKSGAMEPNLALQLLNEVRRSGIRPDIITYNTLISACSRE 334
Query: 85 --FKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE----DKVDK 138
+ A+ V M + + + + G+ AE F L + D V
Sbjct: 335 SNLEEAVAVFSDMESHRCQPDLWTYNAMISVYGRCARARKAEELFKELESKGFFPDAVT- 393
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
Y +LL + REG ++ + ++M + G + YN I+ +Y G+H++ + DM
Sbjct: 394 -YNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDM 452
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
K +G PD +Y + I+S G S++ NV+ EM + + TYS + Y AG
Sbjct: 453 KSSGRNPDAVTYTVLIDSLGKASKVEEAANVMSEM-LDAGVKPTLHTYSALICAYAKAGK 511
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD-- 316
+E+A C D L Y+ ++ + +EM K GL ++ D
Sbjct: 512 REEAEETF-NCMRRSGIKPDRLAYSVMLDFFLRF---NEMKKAMGLYHEMIREGFTPDNG 567
Query: 317 -YITMLGSLVK 326
Y M+ +LV+
Sbjct: 568 LYEVMMHALVR 578
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 68/129 (52%), Gaps = 2/129 (1%)
Query: 129 SLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQH 188
SL E K+D Y +L+ + ++ + +++ L ++++ G Y+ +M Y +G H
Sbjct: 1012 SLGLEPKLDT-YRSLITAFNKQRMYEQAEELFEELRSNGYKLDRAFYHLMMKTYRTSGDH 1070
Query: 189 EKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYST 248
K ++L MKE+G+ P + + + SYG + ENVL+ + + + + +D YS+
Sbjct: 1071 RKAENLLAIMKESGIEPTISTMHLLMVSYGKSGQPEEAENVLKNLRT-TGVVLDTLPYSS 1129
Query: 249 VANYYIIAG 257
V + Y+ G
Sbjct: 1130 VIDAYLKKG 1138
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 126/293 (43%), Gaps = 10/293 (3%)
Query: 121 ESAETYFNSL---NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNG 177
E A FN++ VD + G LL + + ++E ++Q++++MG S +
Sbjct: 826 ERARAIFNTMMRDGPSPTVDSVNG-LLQALIVDRRLNELYVVIQELQDMGLKISKSSILL 884
Query: 178 IMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS 237
+ + G ++ + MK G P YRI + + +E +L EME ++
Sbjct: 885 TLEAFAQAGNLFEVQKIYNGMKAAGYFPTMHVYRIMLRLLCKCKRVRDVETMLCEME-EA 943
Query: 238 HISMDWGTYSTVANYYI-IAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKD 296
D +++ Y+ I K IIY +K +D S D YN LI Y +
Sbjct: 944 GFQPDLQICNSILKLYLGIEDFKSMGIIY-QKIQD-ASLKPDEETYNTLIIMYCRDRRPE 1001
Query: 297 EMMKFWG-LQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNII 355
E ++ + + +L+ Y +++ + K E+AE++ EE + Y D +++
Sbjct: 1002 EGFSLMNKMRSLGLEPKLD-TYRSLITAFNKQRMYEQAEELFEELRSNGYKLDRAFYHLM 1060
Query: 356 LLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMK 408
+ Y G KA+ +L + + G PT ++ ++ Y E+A +K
Sbjct: 1061 MKTYRTSGDHRKAENLLAIMKESGIEPTISTMHLLMVSYGKSGQPEEAENVLK 1113
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 81/191 (42%), Gaps = 3/191 (1%)
Query: 83 KRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED-KVDK-LY 140
+R + + M GL + + + K R E AE F L K+D+ Y
Sbjct: 998 RRPEEGFSLMNKMRSLGLEPKLDTYRSLITAFNKQRMYEQAEELFEELRSNGYKLDRAFY 1057
Query: 141 GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKE 200
++ Y G ++ +L+ MKE G + + +M Y +GQ E+ +VL +++
Sbjct: 1058 HLMMKTYRTSGDHRKAENLLAIMKESGIEPTISTMHLLMVSYGKSGQPEEAENVLKNLRT 1117
Query: 201 NGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKE 260
GV D Y I++Y + + + L EM+ ++ I D ++ ++
Sbjct: 1118 TGVVLDTLPYSSVIDAYLKKGDFKAGIEKLTEMK-EAGIEPDHRIWTCFIRAATLSEGTN 1176
Query: 261 KAIIYLKKCED 271
+AI+ L +D
Sbjct: 1177 EAIVLLNALQD 1187
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 82/407 (20%), Positives = 174/407 (42%), Gaps = 12/407 (2%)
Query: 81 SRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSL-NDEDKVDKL 139
S RF+ A ++ E + +G SV L +GK R ++ A + F + D +
Sbjct: 65 SAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSST 124
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +++ G V+E+ ++ +M+ F + L N ++ + E+ +
Sbjct: 125 YNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESAS 184
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ G PD +Y I+ G + ++ + ++M H + + Y+++ + I G K
Sbjct: 185 QRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGH-NANPVVYTSLIRNFFIHGRK 243
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
E K+ K L ++ + + + M F ++ + R Y
Sbjct: 244 EDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDV-RSYSI 302
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
++ L K G+ E + + + D R N ++ G+ + G + KA +L+E+ +K
Sbjct: 303 LIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKC 362
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRD 439
PT ++ I G A + +++A+ +EA ++K L SS++D G
Sbjct: 363 VQPTVATYGAIVDGLAKIDRLDEAYMLFEEA-----KSKGIELNVVLYSSLIDGFGKVGR 417
Query: 440 VEEVEAFVSSLKIKVQKRNMY--HALTEAHIRSGQEVDGLL--ESMK 482
++E + + K N+Y ++L +A +++ + + L+ +SMK
Sbjct: 418 IDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMK 464
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 149/343 (43%), Gaps = 18/343 (5%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLN--- 131
+I L R + A ++ + M L ++ + +D + K R LE A F S +
Sbjct: 128 IIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRG 187
Query: 132 -DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEK 190
+ D V Y +L++ ++G VDE+ L +KM + G + + Y ++ + G+ E
Sbjct: 188 CNPDCVT--YCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKED 245
Query: 191 IPDVLLDMKENGVPPDNF---SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYS 247
+ ++ G PD +Y C+ G E+ + +++ S + D +YS
Sbjct: 246 GHKIFKELIRRGCKPDLTLLNTYMDCVFKAG---EVEKGRMIFEDIRSYGFLP-DVRSYS 301
Query: 248 TVANYYIIAGLKEKA--IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQ 305
+ + AG + I + K + + DA YN ++ + G + +
Sbjct: 302 ILIHGLTKAGQARETSNIFHAMKQQGF---ALDARAYNAVVDGFCKSGKVHKAYEILEEM 358
Query: 306 KIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMI 365
K KC + Y ++ L KI L+EA + EE + + + + ++ G+ + G I
Sbjct: 359 KEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRI 418
Query: 366 EKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMK 408
++A +L+E++KKG TP +W+ + + +A C +
Sbjct: 419 DEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQ 461
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 52/274 (18%), Positives = 122/274 (44%), Gaps = 18/274 (6%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L++ + G E+ ++ MK+ G A YN ++ + +G+ K ++L +MK
Sbjct: 300 YSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMK 359
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E V P +Y ++ L + +E +S+ I ++ YS++ + + G
Sbjct: 360 EKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKG-IELNVVLYSSLIDGFGKVGRI 418
Query: 260 EKAIIYLKKCEDIVSK--SKDALGYNHLISHYASLGNKDE-MMKFWGLQKIKCKKQLNRD 316
++A + L E+++ K + + +N L+ +E ++ F ++++KC
Sbjct: 419 DEAYLIL---EEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPN-TYT 474
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNII-----LLGYSQKGMIEKADAV 371
Y ++ L ++ + +A ++ + VPN++ + G ++ G I A ++
Sbjct: 475 YSILINGLCRVQKYNKAFVFWQDMQKQGL-----VPNVVTYTTMISGLAKVGNITDAYSL 529
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
+ G P S++ + G ++ N +A++
Sbjct: 530 FERFKANGGIPDAASFNALIEGMSNANRAMEAYQ 563
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 122/277 (44%), Gaps = 24/277 (8%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
L ++C + G V++ + + ++ G +Y+ ++ T GQ + ++ M
Sbjct: 264 LLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAM 323
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYI-IAG 257
K+ G D +Y ++ + ++ +L+EM+ + + TY + + I
Sbjct: 324 KQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKC-VQPTVATYGAIVDGLAKIDR 382
Query: 258 LKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR 315
L E +++ E+ SK + + Y+ LI + +G DE + L+++ KK L
Sbjct: 383 LDEAYMLF----EEAKSKGIELNVVLYSSLIDGFGKVGRIDE--AYLILEEMM-KKGLTP 435
Query: 316 DYIT---MLGSLVKIGELEEAEKMLEEW-ELSC----YCYDFRVPNIILLGYSQKGMIEK 367
+ T +L +LVK E+ EA + E+ C Y Y +I++ G + K
Sbjct: 436 NVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTY-----SILINGLCRVQKYNK 490
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
A +++ K+G P +++ + +G A N+ A+
Sbjct: 491 AFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAY 527
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 53/272 (19%), Positives = 117/272 (43%), Gaps = 14/272 (5%)
Query: 137 DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
D Y +++ + G + E+ L +M+ S A YN ++ Y + G+ E +L
Sbjct: 18 DVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLE 77
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
++E G P S+ + G + ++ ++ + M+ + + TY+ + + +
Sbjct: 78 RLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAE--PNSSTYNIIIDMLCLG 135
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
G E+A L + E S + L N ++ +E K + + ++ N D
Sbjct: 136 GRVEEAYRILDEMEH-ASLFPNLLTVNIMVDRLCKARKLEEAYKIF---ESASQRGCNPD 191
Query: 317 ---YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
Y +++ L K G+++EA ++ E+ + + + V ++ + G E + K
Sbjct: 192 CVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFK 251
Query: 374 EIVKKGKTP---TPNSW--SIIAAGYADKNNM 400
E++++G P N++ + AG +K M
Sbjct: 252 ELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRM 283
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 22/151 (14%)
Query: 300 KFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWE----LSC-YCYDFRVPNI 354
KF+ K + K + Y +M+ L K G L EAE++ + E + C Y Y N
Sbjct: 4 KFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAY-----NT 58
Query: 355 ILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA---FECMKEAL 411
+++GY G E A +L+ + ++G P+ S++ I K +++A FE MK
Sbjct: 59 MIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK--- 115
Query: 412 AVHEENKFWRPKPSLVSSILDWLGDNRDVEE 442
K P S + I+D L VEE
Sbjct: 116 ------KDAEPNSSTYNIIIDMLCLGGRVEE 140
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 97/222 (43%), Gaps = 4/222 (1%)
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
++K G+ PD+ SY I L E + +ME++ + + Y+T+ Y A
Sbjct: 8 ELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYA-YNTMIMGYGSA 66
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
G E A L++ + + +N +++ DE + + + K K + +
Sbjct: 67 GRFEDAYKLLERLRE-RGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEPNSST 124
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y ++ L G +EEA ++L+E E + + NI++ + +E+A + +
Sbjct: 125 YNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESAS 184
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL-AVHEEN 417
++G P ++ + G K +++A+ ++ L A H N
Sbjct: 185 QRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNAN 226
>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
Length = 1098
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 140/366 (38%), Gaps = 4/366 (1%)
Query: 49 PDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHA 108
P L P L + V + S ++R L + + ALQV + M G S+
Sbjct: 154 PAPPLFPHLVE-VYKEFSFSAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCN 212
Query: 109 VQLDLIGKVRGLESAETYFNSLNDEDKV-DKLYGALL-NCYVREGLVDESLSLMQKMKEM 166
L+ + + L + F + + DK A++ Y + V +L +++M +M
Sbjct: 213 SILNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKM 272
Query: 167 GSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSM 226
G + + Y+ +M Y GQ +L + G P+ +Y + + Y +
Sbjct: 273 GVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEA 332
Query: 227 ENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLI 286
E V+QE+ + +D + V N Y G E A L + D + YN +I
Sbjct: 333 EGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVD-SRLQVNLFVYNIMI 391
Query: 287 SHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYC 346
+ Y LG E + Y +++ K G + +A + + +
Sbjct: 392 NGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFA 451
Query: 347 YDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFEC 406
N +L G+ G I+ A + ++KKG P S S + G+ EKA
Sbjct: 452 ATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNL 511
Query: 407 MKEALA 412
KE LA
Sbjct: 512 WKETLA 517
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 84/406 (20%), Positives = 166/406 (40%), Gaps = 61/406 (15%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
N++ +R++ GD ++ V +Q G + + + + K HAL+ E M+
Sbjct: 212 NSILNRLAQTGDLGATVA-VFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMT 270
Query: 97 GQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVD 154
G+ ++ + ++ +V A +SL + Y L+ Y E ++
Sbjct: 271 KMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNME 330
Query: 155 ESLSLMQKMK-------EMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDN 207
E+ ++Q+++ + FG+ +N Y G+ E +L +M ++ + +
Sbjct: 331 EAEGVVQEIRKNKQLVVDEAVFGAVING------YCQMGRMEDAARLLNEMVDSRLQVNL 384
Query: 208 FSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAI-IYL 266
F Y I IN Y + N+L EM + D +Y+++ + Y GL KA Y
Sbjct: 385 FVYNIMINGYCKLGRMVEAHNILHEMTGVG-VRPDTYSYNSLVDGYCKKGLMNKAFETYN 443
Query: 267 KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGL--------QKIKC--------- 309
+ + + L YN L+ + SLG+ D+ ++ W L +I C
Sbjct: 444 TMLRNGFAAT--TLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFK 501
Query: 310 ----KKQLN--------------RDYITMLGSLVKIGELEEAEKM---LEEWELSCYCYD 348
+K LN + T++ L KI + EAE++ +++W
Sbjct: 502 SGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIIT 561
Query: 349 FRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGY 394
+R + GY + G +++A +L E+ G PT ++ + G+
Sbjct: 562 YRT---LFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGH 604
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/319 (19%), Positives = 125/319 (39%), Gaps = 43/319 (13%)
Query: 118 RGLESAETYFNSLND-----------EDKVDKL-----------YGALLNCYVREGLVDE 155
RGL T FN++ + E+ VDK+ Y L + Y + G +D
Sbjct: 518 RGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDR 577
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
+ ++ +++ +G + +N ++ + QH K+ D+L +M G+ P+ +Y I
Sbjct: 578 ASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIA 637
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY-----LKKCE 270
+ +L + N+ EM + + + S V+ +Y E ++
Sbjct: 638 GWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIP 697
Query: 271 DIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGEL 330
DI + + + I A GN W I + G L K+G +
Sbjct: 698 DISAPRLEIGKVANFIDTVAG-GNHHSAKIMWN--------------IVIFG-LCKLGRI 741
Query: 331 EEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSII 390
E+A+ +L + + + D + ++ G S G ++ A + ++ G TP +++ +
Sbjct: 742 EDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSL 801
Query: 391 AAGYADKNNMEKAFECMKE 409
G + +A K+
Sbjct: 802 IYGLCKSGELSRAVSLFKK 820
>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 89/169 (52%), Gaps = 11/169 (6%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +++ Y + G +D++ +L +MK +G ++YN ++ +Y G+ E+ DV +M+
Sbjct: 256 YSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREME 315
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+G+ D +Y + YG + + + V +EM+++ H+S + TYST+ + Y GL
Sbjct: 316 NSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKAR-HVSPNLLTYSTLIDVYSKGGLY 374
Query: 260 EKAIIYLKKCE------DIVSKSK--DALGYNHLISHYASLGNKDEMMK 300
+A+ ++ + D+V S DAL N L+ SL DEM K
Sbjct: 375 REAMDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSL--LDEMTK 421
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 167/381 (43%), Gaps = 40/381 (10%)
Query: 108 AVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYG--ALLNCYVREGLVDESLSLMQKMKE 165
+ + +G++ +E A+T F + E + +Y A+++ Y R G +E++ + MK+
Sbjct: 81 SAMISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKD 140
Query: 166 MGSFGSALNYNGIMCLYTNTG-QHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELS 224
G + + YN ++ G + +++ ++ +M NG+ PD RI NS A
Sbjct: 141 YGLKPNLVTYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPD----RITFNSLLAVCSKG 196
Query: 225 SMENVLQEMESQ---SHISMDWGTYSTVANYYIIAGLKEKA--IIYLKKCEDIVSKSKDA 279
+ + + + I D TY+T+ + G + A I+ ++I+ +
Sbjct: 197 GLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILP---NV 253
Query: 280 LGYNHLISHYASLGNKDEM------MKFWGLQKIKCKKQLNR-DYITMLGSLVKIGELEE 332
+ Y+ +I YA G D+ MKF G+ L+R Y T+L K+G EE
Sbjct: 254 VTYSTMIDGYAKAGRLDDARNLFNEMKFLGIS-------LDRVSYNTLLSIYAKLGRFEE 306
Query: 333 AEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAA 392
A + E E S D N +L GY ++ + V +E+ + +P ++S +
Sbjct: 307 AMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLID 366
Query: 393 GYADKNNMEKAFECMKEALAVHEENKFWRPKPSLV--SSILDWLGDNRDVEEVEAFVSSL 450
Y+ +EA+ V E K K +V S+++D L N VE + + +
Sbjct: 367 VYSKGG-------LYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 419
Query: 451 KIKVQKRNM--YHALTEAHIR 469
+ + N+ Y+++ +A R
Sbjct: 420 TKEGIRPNVVTYNSIIDAFGR 440
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 154/359 (42%), Gaps = 9/359 (2%)
Query: 39 LYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQ 98
+ S + LG +++ T V + EG + +I A+++ M
Sbjct: 83 MISTLGRLGKVEMAKT-VFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKDY 141
Query: 99 GLAFSVHDHAVQLDLIGKVRGLE---SAETYFNSLNDEDKVDKL-YGALLNCYVREGLVD 154
GL ++ + +D GK G+E E + L + + D++ + +LL + GL +
Sbjct: 142 GLKPNLVTYNAVIDACGK-GGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWE 200
Query: 155 ESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICI 214
+ SL +M G YN ++ GQ + +++ +M + P+ +Y I
Sbjct: 201 AARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMI 260
Query: 215 NSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVS 274
+ Y L N+ EM+ IS+D +Y+T+ + Y G E+A+ ++ E+
Sbjct: 261 DGYAKAGRLDDARNLFNEMKFLG-ISLDRVSYNTLLSIYAKLGRFEEAMDVCREMEN-SG 318
Query: 275 KSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
KD + YN L+ Y D + K + K + Y T++ K G EA
Sbjct: 319 IRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAM 378
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSW-SIIAA 392
+ E++ + D + + ++ + G++E A ++L E+ K+G P ++ SII A
Sbjct: 379 DVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 437
>gi|414871052|tpg|DAA49609.1| TPA: hypothetical protein ZEAMMB73_878928 [Zea mays]
Length = 807
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 121/268 (45%), Gaps = 9/268 (3%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +++ + G V+E+ + Q + E G + N ++ + G +IP ++ M+
Sbjct: 288 YSTIIHGLCKVGSVNEAFDIFQSVTEEGMELDIVTCNSLINGFRLHGHTREIPKMIEMMR 347
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL- 258
GV PD +Y I I + ++ + +++ Q I ++ TYS + N GL
Sbjct: 348 GLGVEPDVVTYTILITGHCEGGDVEEGMRIRKDILGQG-IELNIVTYSVLINALFKKGLF 406
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQL---NR 315
E ++ + C + D + Y+ LI + LG ++ W L + C +++ +
Sbjct: 407 YEVENLFGEICS--IGLELDVIAYSILIHGFCKLGEIGRALQVWNL--MCCSQRVIPTSV 462
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
+++++L L K G L+EA LE D + N+++ GY++ G I A + I
Sbjct: 463 NHVSILLGLCKKGFLDEARSYLETVASKYQPSDVVLYNVVIDGYAKVGDIGNAVQLYDAI 522
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKA 403
+ G PT + + + GY ++ A
Sbjct: 523 IMAGMCPTIVTCNSLLYGYCKFGDLHMA 550
Score = 38.1 bits (87), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 123/284 (43%), Gaps = 22/284 (7%)
Query: 118 RGLESAETYFNSL----NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
+G +SA T + L + D ++ AL N Y R + ++L ++ KM + S
Sbjct: 124 QGSDSAPTLCDILWCGFREWDSSSIVWDALANSYARAQMNHDALYVLSKMNSLNMQISIT 183
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
Y+ + LY+ + + +M+ G+PP ++S+ I I+ + ++ + LQE
Sbjct: 184 TYDSL--LYSLRKADVALA-IFKEMESCGIPPSDYSHGILIDGLCKQGKIGEALSFLQET 240
Query: 234 ESQSH---ISMDWGTY-STVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHY 289
+ + M + T S + N+ I K + LK ++ S+ Y+ +I
Sbjct: 241 RKEGKFKPLGMTFNTLMSALCNWGFIQDAKSVFCLMLKYG---LNPSRHT--YSTIIHGL 295
Query: 290 ASLGNKDEMMKFWGLQKIKCKKQLNRDYIT---MLGSLVKIGELEEAEKMLEEWELSCYC 346
+G+ +E + Q + ++ + D +T ++ G E KM+E
Sbjct: 296 CKVGSVNEAFDIF--QSVT-EEGMELDIVTCNSLINGFRLHGHTREIPKMIEMMRGLGVE 352
Query: 347 YDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSII 390
D I++ G+ + G +E+ + K+I+ +G ++S++
Sbjct: 353 PDVVTYTILITGHCEGGDVEEGMRIRKDILGQGIELNIVTYSVL 396
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 76/386 (19%), Positives = 161/386 (41%), Gaps = 47/386 (12%)
Query: 91 VSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV---DKLYGALLNCY 147
V ++MS +G++ +V + + + K ++ AE + +E + ++ YG L++ Y
Sbjct: 249 VLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGY 308
Query: 148 VREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDN 207
R G +D+++ L+ +M +G + N ++ Y G+ + V+ M + + PD+
Sbjct: 309 CRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDS 368
Query: 208 FSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLK 267
+SY ++ Y S N+ +M + G TV
Sbjct: 369 YSYNTLLDGYCREGHTSEAFNLCDKMLQE-------GIEPTV------------------ 403
Query: 268 KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKI 327
L YN L+ +G D+ ++ W L + Y T+L L K+
Sbjct: 404 ------------LTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKM 451
Query: 328 GELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSW 387
E A + ++ + N ++ G + G + +A+ + ++ G +P ++
Sbjct: 452 ENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITY 511
Query: 388 SIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFV 447
+ GY +N+ +AF+ +K A+ E + P + +S++ L +R + EV +
Sbjct: 512 RTLIDGYCKASNVGQAFK-VKGAM----EREPISPSIEMYNSLISGLFKSRRLVEVTDLL 566
Query: 448 SSLKIKVQKRNM--YHALTEAHIRSG 471
+ + I+ N+ Y AL + + G
Sbjct: 567 TEMGIRGLTPNIVTYGALIDGWCKEG 592
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 118/267 (44%), Gaps = 3/267 (1%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
++ +L YV +GL +L + M + G S + N ++ G+ V M
Sbjct: 124 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 183
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
G+ PD F I +N++ ++ +++ME+ + + TY ++ N Y+ G
Sbjct: 184 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLG-VEPNIVTYHSLINGYVSLGD 242
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFW-GLQKIKCKKQLNRDY 317
E A LK + S++ + Y LI Y DE K G+Q+ R Y
Sbjct: 243 VEAAKGVLKFMSE-KGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAY 301
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
++ + G++++A ++L+E + + N ++ GY ++G I +A+ V+ +V
Sbjct: 302 GVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVD 361
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAF 404
P S++ + GY + + +AF
Sbjct: 362 WNLKPDSYSYNTLLDGYCREGHTSEAF 388
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 122/281 (43%), Gaps = 23/281 (8%)
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
++N + ++G VDE+ ++KM+ +G + + Y+ ++ Y + G E VL M E G
Sbjct: 198 MVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKG 257
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
V + +Y + I Y + ++ E VL+ M+ ++ + D Y + + Y G + A
Sbjct: 258 VSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDA 317
Query: 263 IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEM------MKFWGLQKIKCKKQLNRD 316
+ L + + K+ + N LI+ Y G E M W L K +
Sbjct: 318 VRLLDEMLRLGLKT-NLFICNSLINGYCKRGEIHEAEGVITRMVDWNL------KPDSYS 370
Query: 317 YITMLGSLVKIGELEEA----EKMLEEW-ELSCYCYDFRVPNIILLGYSQKGMIEKADAV 371
Y T+L + G EA +KML+E E + Y N +L G + G + A +
Sbjct: 371 YNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTY-----NTLLKGLCRVGAFDDALQI 425
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
++K+G P +S + G N E A K+ LA
Sbjct: 426 WHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILA 466
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 86/430 (20%), Positives = 177/430 (41%), Gaps = 32/430 (7%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
+ D+ + EG + + L +++ L F ALQ+ M +G+A ++ LD +
Sbjct: 390 LCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLF 449
Query: 116 KVRGLESAETYFNSL--NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
K+ E A T + + K + +++ + G + E+ + KMK++G +
Sbjct: 450 KMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGI 509
Query: 174 NYNGIM---CLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVL 230
Y ++ C +N GQ K+ M+ + P Y I+ L + ++L
Sbjct: 510 TYRTLIDGYCKASNVGQAFKVKGA---MEREPISPSIEMYNSLISGLFKSRRLVEVTDLL 566
Query: 231 QEMESQSHISMDWGTYSTVANYYIIAGLKEKAII-YLKKCEDIVSKSKDALGYNHLISHY 289
EM + ++ + TY + + + G+ +KA Y + E+ S + + + ++S
Sbjct: 567 TEMGIRG-LTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTEN--GLSANIIICSTMVSGL 623
Query: 290 ASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDF 349
LG DE +QK+ D+ L S ++ +++ L+E C F
Sbjct: 624 YRLGRIDEANLL--MQKM-VDHGFFPDHECFLKSDIRYAAIQKIADSLDE-----SCKTF 675
Query: 350 RVPN-----IILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
+PN I + G + G ++ A + KG P ++ + GY+ N+++AF
Sbjct: 676 LLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAF 735
Query: 405 ECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNM--YHA 462
E L + P +++++ L + +V+ + L K N+ Y+
Sbjct: 736 RLRDEML-----RRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNT 790
Query: 463 LTEAHIRSGQ 472
L + + + G
Sbjct: 791 LIDGYCKIGN 800
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 166/419 (39%), Gaps = 55/419 (13%)
Query: 103 SVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQK 162
SV D LDL K+ ES E + + Y LLN R GLVDE + +
Sbjct: 155 SVADTLFVLDLCRKMNKDESFELKYKL------IIGCYNTLLNSLARFGLVDEMKQVYME 208
Query: 163 MKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSE 222
M E + YN ++ Y G E+ + + E G+ PD F+Y I Y R +
Sbjct: 209 MLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKD 268
Query: 223 LSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKD---- 278
L S V +EM + + VA ++I GL + I + D+ K KD
Sbjct: 269 LDSAFKVFKEM------PLKGCRRNEVAYTHLIHGLCVERRI--DEAMDLFVKMKDDDCY 320
Query: 279 --ALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKM 336
Y LI K E + + K K Y ++ SL +LE+A ++
Sbjct: 321 PTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKAREL 380
Query: 337 LEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYAD 396
L + + N ++ GY ++GMIE A V++ + + P +++ + GY
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYC- 439
Query: 397 KNNMEKAFECMKEALA------VHEENKF-------------WR-----------PKPSL 426
K N+ KA + + L V N +R P P
Sbjct: 440 KRNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWT 499
Query: 427 VSSILDWLGDNRDVEEVEAFVSSLKIK--VQKRNMYHALTEAHIRSGQ--EVDGLLESM 481
+S++D L ++ VEE SL+ K + MY AL + + ++G+ E +LE M
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKM 558
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 76/373 (20%), Positives = 164/373 (43%), Gaps = 44/373 (11%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I+ L +R AL + + M +G+ ++H + V +D + LE A + ++
Sbjct: 329 LIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKG 388
Query: 135 KVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEK-- 190
+ + Y AL+N Y + G+++++L +++ M+ + YN ++ Y H+
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVHKAMG 448
Query: 191 ----------IPDV-----LLD-----------------MKENGVPPDNFSYRICINSYG 218
+PDV L+D M + G+ PD ++Y I+S
Sbjct: 449 VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLC 508
Query: 219 ARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS-- 276
+ ++ +E Q + + Y+ + + Y AG +A + L+K ++SK+
Sbjct: 509 KSKRVEEACDLFDSLE-QKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEK---MLSKNCL 564
Query: 277 KDALGYNHLISHYASLGN-KDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEK 335
++L +N LI + G K+ + + KI + ++ D I ++ L+K G+ + A +
Sbjct: 565 PNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTI-LIHRLLKDGDFDHAYR 623
Query: 336 MLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYA 395
++ S D + Y ++G ++ A+ ++ ++ + G +P ++S + GY
Sbjct: 624 RFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYG 683
Query: 396 DKNNMEKAFECMK 408
D AF +K
Sbjct: 684 DLGRTNSAFVVLK 696
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 114/288 (39%), Gaps = 33/288 (11%)
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
L++ +++G D + Q+M G+ A Y + Y G+ + D++ MKENG
Sbjct: 608 LIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENG 667
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEM-----ESQSH---------ISMDWG---- 244
V PD F+Y I YG +S VL+ M E H + M +G
Sbjct: 668 VSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKG 727
Query: 245 ------TYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEM 298
S + + I+ L EK + + + +A Y L+ +GN
Sbjct: 728 GEPGVCVMSNMMEFDIVVELLEKMVEH--------GVTPNAKSYEKLMLGICEIGNLRVA 779
Query: 299 MK-FWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL 357
K F +Q+ + + +L K+ + EA K++++ + I++
Sbjct: 780 EKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILIC 839
Query: 358 GYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
+KG E+ +V + +++ G +W II G + +E +E
Sbjct: 840 RLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYE 887
>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 456
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 74/388 (19%), Positives = 162/388 (41%), Gaps = 42/388 (10%)
Query: 29 RAVKP--VARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFK 86
+ ++P V N L + LG S + VL + + G + + + L +++ L + +
Sbjct: 81 KGIEPNLVTLNILINCFCHLGQMSFSFS-VLGKILKLGYQPNTITLTTLMKGLCLKGEVQ 139
Query: 87 HALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDK--LYGALL 144
++ + + QG + + L+ + K+ A + + D +Y ++
Sbjct: 140 KSVHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTII 199
Query: 145 NCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVP 204
+ ++ LV+E+ +M G F + + Y ++ + GQ +L +M +
Sbjct: 200 DGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNIN 259
Query: 205 PDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAII 264
P+ ++Y I I++ ++ +N+L EM + + D TY+++ + + +KA
Sbjct: 260 PNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPA-DVVTYTSLLDGFCKNQNLDKATA 318
Query: 265 YLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSL 324
K MK WG+Q K Y ++ L
Sbjct: 319 LFMK------------------------------MKEWGIQPNK------YTYTALIDGL 342
Query: 325 VKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTP 384
K G L++A+K+ ++ + C D N+++ G ++GM+++A A+ ++ G P
Sbjct: 343 CKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNV 402
Query: 385 NSWSIIAAGYADKNNMEKAFECMKEALA 412
++ II K+ +KA + + E +A
Sbjct: 403 VTFEIIIRSLFKKDENDKAEKLLHEMIA 430
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 87/436 (19%), Positives = 167/436 (38%), Gaps = 59/436 (13%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
+ + L G + + +IR+L + A V + M+ G V + +D +
Sbjct: 78 LFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLS 137
Query: 116 KVRGLESAETYFNSLNDEDKV--DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
K + +A F S+ + +Y AL++ + +D +L ++ +MK+ +
Sbjct: 138 KAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTI 197
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
YN ++ +G E +M E G PD ++Y I I+ + + + L +
Sbjct: 198 TYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQE 257
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKK-----CEDIVSKSKDALGYNHLISH 288
+ + ++D TY+ + ++ E+A+ ++K C ++ YN L++
Sbjct: 258 TTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIAT------YNALLNG 311
Query: 289 YASLGNKDEMMKFWGLQKI---KCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELS-- 343
+G +E + L+KI C + Y +++ L K EA K+ +E L
Sbjct: 312 LCKMGRLEEAIDL--LRKIVDNGCTPDV-VTYTSLIDGLGKEKRSFEAYKLFKEMALRGL 368
Query: 344 -----CYCYDFR-----------------------VPNIILL-----GYSQKGMIEKADA 370
CY R VP+++ L G S+ G I A
Sbjct: 369 ALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVR 428
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSI 430
+ K + +G P +S + G M+ A E + + F P + +
Sbjct: 429 IFKSMEARGLAPNEVVYSALIHGLCKARKMDCALE-----MLAQMKKAFCTPDTITYNIL 483
Query: 431 LDWLGDNRDVEEVEAF 446
+D L + DVE AF
Sbjct: 484 IDGLCKSGDVEAARAF 499
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/298 (19%), Positives = 130/298 (43%), Gaps = 12/298 (4%)
Query: 153 VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
++E+++LM+K+ G + YN ++ G+ E+ D+L + +NG PD +Y
Sbjct: 2 IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61
Query: 213 CINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG-LKEKAIIYLKKCED 271
I+ G + +EM + +++D Y+ + + G + + + +Y +
Sbjct: 62 LIDGLGKEKRSFEAYKLFKEMALRG-LALDTVCYTALIRELLQTGKIPQASSVY----KT 116
Query: 272 IVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGE 329
+ S D + + +I + G ++ + + + Y ++ L K +
Sbjct: 117 MTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK 176
Query: 330 LEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSI 389
++ A +ML + + + D N+++ G + G +E A A E+++ G P +++I
Sbjct: 177 MDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNI 236
Query: 390 IAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFV 447
+ +G+ N + A +LA ++I+DWL N+ +EE A +
Sbjct: 237 LISGFCKAGNTDAA----SHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALM 290
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/267 (19%), Positives = 119/267 (44%), Gaps = 8/267 (2%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y A+++ + ++E+++LM+K+ G + YN ++ G+ E+ D+L +
Sbjct: 270 YTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIV 329
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG-L 258
+NG PD +Y I+ G + +EM + +++D Y+ + + G +
Sbjct: 330 DNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRG-LALDTVCYTALIRELLQTGKI 388
Query: 259 KEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
+ + +Y + + S D + + +I + G ++ + + +
Sbjct: 389 PQASSVY----KTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVV 444
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y ++ L K +++ A +ML + + + D NI++ G + G +E A A E++
Sbjct: 445 YSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEML 504
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKA 403
+ G P +++I+ +G+ N + A
Sbjct: 505 EAGCKPDVYTYNILISGFCKAGNTDAA 531
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 86/208 (41%), Gaps = 8/208 (3%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
+ + L G + + +IR+L + A V + M+ G V + +D +
Sbjct: 359 LFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLS 418
Query: 116 KVRGLESAETYFNSLNDEDKV--DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
K + +A F S+ + +Y AL++ + +D +L ++ +MK+ +
Sbjct: 419 KAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTI 478
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
YN ++ +G E +M E G PD ++Y I I+ + + V +M
Sbjct: 479 TYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDM 538
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEK 261
S S S + TY +I+GL ++
Sbjct: 539 -SSSRCSANVVTYGA-----LISGLCKR 560
>gi|224144893|ref|XP_002325452.1| predicted protein [Populus trichocarpa]
gi|222862327|gb|EEE99833.1| predicted protein [Populus trichocarpa]
Length = 864
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 131/278 (47%), Gaps = 5/278 (1%)
Query: 107 HAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMK 164
+ +D K+ ++ AE+ + + V + Y +++N Y ++G++D ++ +M+KM
Sbjct: 299 YTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKML 358
Query: 165 EMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELS 224
+ +A Y ++ + G+ + D+ +MK NG+ ++F IN+ ++
Sbjct: 359 DQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKME 418
Query: 225 SMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNH 284
E + + M S+ + +D Y+++ + + G + A +K + K D + YN
Sbjct: 419 EAEGLCKYMMSKG-LLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKF-DVVAYNV 476
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSC 344
LI+ LG D + G++++ Y TM+ + K G+LE A K+ E +
Sbjct: 477 LINGLLRLGKYDAESVYSGIRELGLAPD-RATYNTMINAYCKQGKLENAIKLWNEMKGHS 535
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTP 382
+ NI++ G S+ G E+A VL E++ G P
Sbjct: 536 VMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICP 573
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 154/355 (43%), Gaps = 27/355 (7%)
Query: 73 QRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLN- 131
R+I Q + + M G+ +V H + + K+ L A +++
Sbjct: 15 NRLIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGHLSLALDLIRNVDI 74
Query: 132 DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM---CLYTNTGQH 188
D D V Y + + ++GL ++ + M + +F + N ++ C +
Sbjct: 75 DVDTVT--YNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILVKGFCRIGSVKYG 132
Query: 189 EKIPDVLLD-MKEN----GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDW 243
E + D L+D M ++ + P+ +Y I++Y + LS ++ +EM S + D
Sbjct: 133 EWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYEEMISDGFLP-DV 191
Query: 244 GTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWG 303
TYS++ N G+ +A L++ D + + + + Y L+ G+ E +
Sbjct: 192 VTYSSIINGLCKRGMLTEAKALLRE-MDKMGVNPNHVVYAILVDSLFKAGSAWESFIYQS 250
Query: 304 LQKIKCKKQLNRDYIT-MLGSLVKIGELEEAEKMLEEW-ELSCYCYDFRVPNII-----L 356
Q I C + T ++ L K G+ +EAE M +L+C +PN I +
Sbjct: 251 -QMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNC------IPNNITYTAMI 303
Query: 357 LGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
GY + G ++ A+++L+++ KK P ++S I GY K ++ A MK+ L
Sbjct: 304 DGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKML 358
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 156/336 (46%), Gaps = 21/336 (6%)
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVR-GLESAETYFNSLND----EDKVDK 138
R A ++E M+ G+ F V + V ++ G +R G AE+ ++ + + D+
Sbjct: 451 RESAAFTMAEKMAETGIKFDVVAYNVLIN--GLLRLGKYDAESVYSGIRELGLAPDRAT- 507
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
Y ++N Y ++G ++ ++ L +MK +++ N ++ + G+ E+ DVL +M
Sbjct: 508 -YNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETERAIDVLNEM 566
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWG--TYSTVANYYIIA 256
G+ P+ +R +N A S+ + +LQ + + + Y+++
Sbjct: 567 LLWGICPNVTIHRALLN---ACSKCERADTILQMHKRLVGMGLKANREVYNSLITVLCGL 623
Query: 257 GLKEKAIIYLKKC--EDIVSKSKDALGYNHLI-SHYASLGNKDEMMKFWGLQKIKCKKQL 313
G+ ++A + L E I S D + YN LI H+ S + + + + +
Sbjct: 624 GMTKRATLVLNNMTKEGI---SADTVTYNALIHGHFKSSHIEKALATYTQMLNEGVSPGI 680
Query: 314 NRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
R Y +LG L+ G + +A ++L + + S D + N ++ G+ + G ++A
Sbjct: 681 -RTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLISGHGKIGNKKEAIKFYC 739
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
E+V KG P ++++++ +A M++A E + E
Sbjct: 740 EMVTKGLVPKTSTYNVLIEDFAKVGKMDQARELLNE 775
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 120/274 (43%), Gaps = 15/274 (5%)
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
L++ + G DE+ ++ + ++ + + Y ++ Y G + +L DM++
Sbjct: 266 TLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDMEKK 325
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
V P+ +Y IN Y + L ++++M Q +I + Y+T+ + ++ AG ++
Sbjct: 326 QVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQ-NIMPNAYIYATLIDGHLKAGKQDA 384
Query: 262 AIIYLKKCEDIVSKSK-DALGYNHLI--SHYASLGNKDEMMKFWGLQKIKCKKQLNRD-- 316
A+ D+ ++ K + L N I + +L +M + GL K K L D
Sbjct: 385 AV-------DLYNEMKLNGLEENSFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRV 437
Query: 317 -YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
Y +++ K G A M E+ + +D N+++ G + G + A++V I
Sbjct: 438 NYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLGKYD-AESVYSGI 496
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
+ G P +++ + Y + +E A + E
Sbjct: 497 RELGLAPDRATYNTMINAYCKQGKLENAIKLWNE 530
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 105/233 (45%), Gaps = 29/233 (12%)
Query: 175 YNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEME 234
+N ++ + TG ++ D+ +M GV P+ F++ I ++++ LS ++++ ++
Sbjct: 14 WNRLIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGHLSLALDLIRNVD 73
Query: 235 SQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSK--DALGYNHLISHYASL 292
I +D TY+T + GL + +L +V K D+ N L+ + +
Sbjct: 74 ----IDVDTVTYNTAIWGFCQQGLANQGFGFLSI---MVKKDTFFDSFTCNILVKGFCRI 126
Query: 293 GNKDEMMKF--WGLQKIKCKKQLNRD------------YITMLGSLVKIGELEEAEKMLE 338
G+ +K+ W + + +N D Y T++ + K L EA + E
Sbjct: 127 GS----VKYGEWVMDNLI--DDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYE 180
Query: 339 EWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIA 391
E + D + I+ G ++GM+ +A A+L+E+ K G P ++I+
Sbjct: 181 EMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILV 233
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 155/386 (40%), Gaps = 59/386 (15%)
Query: 56 VLDQWVLEGQKISELELQR------------VIRQLRSRKRFKHALQVSEWMSGQG-LAF 102
+L G+ + LEL R VI +R R + AL+V M +G +A
Sbjct: 122 MLRHLCATGKPVRALELLRQMPRPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAP 181
Query: 103 SVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDK---LYGALLNCYVREGLVDESLSL 159
+ +A + K+ +E A F+ + + +V +Y AL+ Y G +D +L
Sbjct: 182 DKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQY 241
Query: 160 MQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGA 219
+ M + G + YN +M + VL +M++NG PD F+Y I IN Y
Sbjct: 242 REDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCK 301
Query: 220 RSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS--- 276
V +EM SQ + TY+++ + G ++ + ++ K
Sbjct: 302 EGNEKKALEVFEEM-SQKGVRATAVTYTSLIYVFSRKGQVQET----DRLFNVAVKKGIR 356
Query: 277 KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKM 336
D + YN LI+ + + G+ + + + K + Y T++ +G L+EA +
Sbjct: 357 PDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTL 416
Query: 337 LEEWELSCYCYDFRVPNIILLGYSQKG-----------MIEK------------------ 367
++E D N ++ GYS KG M++K
Sbjct: 417 IDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCK 476
Query: 368 ------ADAVLKEIVKKGKTPTPNSW 387
A+ ++KE+V KG TP +++
Sbjct: 477 IRQGDDAENLMKEMVAKGITPDDSTY 502
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 151/322 (46%), Gaps = 22/322 (6%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFG-SALNYNGIMCLYTNTGQHEKIPDVLLDM 198
Y L++ + + G +++++ + +M G SA+ YN ++ Y + G+ + DM
Sbjct: 186 YATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDM 245
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
+ G+ +Y + +++ + S VL+EM+ ++ S D TY+ + N Y G
Sbjct: 246 VQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQ-KNGFSPDVFTYNILINGYCKEGN 304
Query: 259 KEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
++KA L+ E++ K A+ Y LI ++ G E + + + KK + D
Sbjct: 305 EKKA---LEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLF---NVAVKKGIRPD 358
Query: 317 ---YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
Y ++ S G++E A +++ E E D N ++ G+ G +++A ++
Sbjct: 359 VVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLID 418
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEE--NKFWRPKPSLVSSIL 431
E+ K+G P S++ + +GY+ K + +K+AL V +E +K + P ++++
Sbjct: 419 EMTKRGIQPDLVSYNTLISGYSMKGD-------IKDALRVRDEMMDKGFNPTLMTYNALI 471
Query: 432 DWLGDNRDVEEVEAFVSSLKIK 453
L R ++ E + + K
Sbjct: 472 QGLCKIRQGDDAENLMKEMVAK 493
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 97/201 (48%), Gaps = 6/201 (2%)
Query: 205 PDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAII 264
P+ +Y I + AR + + V++EM + I+ D TY+T+ + + G E A+
Sbjct: 145 PNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAV- 203
Query: 265 YLKKCEDIVSK---SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITML 321
K +++++K + A+ YN LI Y +G D +++ + Y ++
Sbjct: 204 --KVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLM 261
Query: 322 GSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKT 381
+L +A +LEE + + + D NI++ GY ++G +KA V +E+ +KG
Sbjct: 262 HALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVR 321
Query: 382 PTPNSWSIIAAGYADKNNMEK 402
T +++ + ++ K +++
Sbjct: 322 ATAVTYTSLIYVFSRKGQVQE 342
>gi|218190151|gb|EEC72578.1| hypothetical protein OsI_06020 [Oryza sativa Indica Group]
Length = 738
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 140/344 (40%), Gaps = 44/344 (12%)
Query: 71 ELQRVIRQLRSRKRFKHALQVSEW-MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNS 129
+L V Q R K++ + V EW + + + + ++ GK R L AE+ + +
Sbjct: 284 DLVNVAVQFRMNKKWDLIIPVCEWILYRSSFRPDIICYNLLIESYGKKRQLNKAESIYMA 343
Query: 130 LNDEDKV--DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQ 187
L + V + Y LL Y G + + ++ +M+E G +A YN +
Sbjct: 344 LLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARC 403
Query: 188 HEKIPDVLLDMKENGVPPDNFSYRICINSYG-ARSELSSMENVLQEMESQSHISMDWGTY 246
EK +V MK + ++ + IN YG A+ +SSM+ V EM+S + TY
Sbjct: 404 TEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMK-VFNEMKSIG-CKPNICTY 461
Query: 247 STVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGL-Q 305
+ + N + GL EKA ++ + D YN L+ Y+ G + + L Q
Sbjct: 462 TALVNAFAREGLCEKAEEVFEEMQQ-AGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQ 520
Query: 306 KIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMI 365
+ C+ D NI++ Y + G+
Sbjct: 521 HMGCEP------------------------------------DRASYNILVDAYGRAGLH 544
Query: 366 EKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
E A+AV +E+ ++G +PT S ++ A +A N + E M +
Sbjct: 545 EDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQ 588
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/323 (17%), Positives = 136/323 (42%), Gaps = 17/323 (5%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLN 145
A++V + M + + + +++ GK + S+ FN + + Y AL+N
Sbjct: 407 AVEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVN 466
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
+ REGL +++ + ++M++ G YN +M Y+ G + ++ M+ G P
Sbjct: 467 AFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEP 526
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
D SY I +++YG E V +E++ + G T+ ++ ++ ++
Sbjct: 527 DRASYNILVDAYGRAGLHEDAEAVFEELKQR-------GMSPTMKSHMLLLAAHARS-GN 578
Query: 266 LKKCEDIVSK------SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
+CE+++++ + D N +++ YA G D+M + + + + Y
Sbjct: 579 ATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLLAAMERRGDADVG-TYNV 637
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
+ + + G + E D + Y+++ + +++E+V G
Sbjct: 638 AVNAYGRAGYVGRMEAAFAAVAARGLAADVVTWTARMGAYARRKEYGRCVGMVEEMVDAG 697
Query: 380 KTPTPNSWSIIAAGYADKNNMEK 402
P + ++ A +D+ +E+
Sbjct: 698 CYPDAGTARVLLAACSDERQVEQ 720
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 126/309 (40%), Gaps = 44/309 (14%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+ Y ++ ++++ S+ + E + Y ++ Y N G + V+ +M+
Sbjct: 321 YNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMR 380
Query: 200 ENGVPPDNFSYR-----------------------------------ICINSYG-ARSEL 223
E+G+PP+ Y + IN YG A+ +
Sbjct: 381 EHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPM 440
Query: 224 SSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYN 283
SSM+ V EM+S + TY+ + N + GL EKA ++ + D YN
Sbjct: 441 SSMK-VFNEMKSIG-CKPNICTYTALVNAFAREGLCEKAEEVFEEMQQ-AGHEPDVYAYN 497
Query: 284 HLISHYASLGNKDEMMKFWGL-QKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWEL 342
L+ Y+ G + + L Q + C+ Y ++ + + G E+AE + EE +
Sbjct: 498 ALMEAYSRAGLPQGASEIFSLMQHMGCEPD-RASYNILVDAYGRAGLHEDAEAVFEELKQ 556
Query: 343 SCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADK---NN 399
+ ++L +++ G + + V+ ++ K G TP + + + YA ++
Sbjct: 557 RGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDD 616
Query: 400 MEKAFECMK 408
ME+ M+
Sbjct: 617 MERLLAAME 625
Score = 41.6 bits (96), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 106/263 (40%), Gaps = 46/263 (17%)
Query: 205 PDNFSYRICINSYGARSELSSMENV-LQEMESQSHISMDWGTYSTVANYYIIA------- 256
PD Y + I SYG + +L+ E++ + +E+Q + D TY+ + Y A
Sbjct: 316 PDIICYNLLIESYGKKRQLNKAESIYMALLEAQCVPTED--TYALLLRAYCNAGSLHRAE 373
Query: 257 ---------GLKEKAIIY------------LKKCEDIVSKSK------DALGYNHLISHY 289
G+ A +Y +K ++ + K + + +I+ Y
Sbjct: 374 GVISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVY 433
Query: 290 ASLGNKDEMMKFWG-LQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYD 348
MK + ++ I CK + Y ++ + + G E+AE++ EE + + + D
Sbjct: 434 GKAKQPMSSMKVFNEMKSIGCKPNIC-TYTALVNAFAREGLCEKAEEVFEEMQQAGHEPD 492
Query: 349 FRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMK 408
N ++ YS+ G+ + A + + G P S++I+ Y E
Sbjct: 493 VYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHE------- 545
Query: 409 EALAVHEENKFWRPKPSLVSSIL 431
+A AV EE K P++ S +L
Sbjct: 546 DAEAVFEELKQRGMSPTMKSHML 568
>gi|242050640|ref|XP_002463064.1| hypothetical protein SORBIDRAFT_02g037020 [Sorghum bicolor]
gi|241926441|gb|EER99585.1| hypothetical protein SORBIDRAFT_02g037020 [Sorghum bicolor]
Length = 558
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 85/423 (20%), Positives = 169/423 (39%), Gaps = 28/423 (6%)
Query: 41 SRISPLGDPDV-SLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQ- 98
+R+ L D ++ VL+ W + + +IR++ KHA+ V WM Q
Sbjct: 91 ARVLALPPADAHAVDAVLNCW---AGRFARRNFPLLIREITISGSLKHAVHVFRWMKIQE 147
Query: 99 ---------GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVR 149
G+ +H Q+D + RGL + D D Y +L++ + R
Sbjct: 148 NYCARNDIYGMMIRLHARHNQVD---QARGLFFEMQEWRCKPDTDT----YNSLIHAHAR 200
Query: 150 EGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFS 209
G ++++M M+ S YN ++ G +K ++ M ENGV PD +
Sbjct: 201 AGQWRWAINIMDDMQRAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLIT 260
Query: 210 YRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAI-IYLKK 268
+ I ++++ ++ S + M+S S ++ D T + V + + L +AI ++
Sbjct: 261 HNIVLSAFKNGAQYSKAIAYFEIMKS-SKVAPDTCTMNIVIHCLVKVALYGEAIELFNSM 319
Query: 269 CEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIG 328
E D + Y ++ Y+ G + + + + + Y +LG+ G
Sbjct: 320 RERRTICPPDVVTYTSIMYSYSVCGQAENCKAVFDMMVAEGVRPNIVSYNALLGAYASHG 379
Query: 329 ELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWS 388
EA + + + + + D +L Y + + EKA V E+ K P S++
Sbjct: 380 MHTEALETFKLLKQNGFKPDIVSYTSLLNAYGRSALPEKAREVFNEMRKNACKPNKVSYN 439
Query: 389 IIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVS 448
+ Y +++A + E E +P +S++L G R ++ ++
Sbjct: 440 ALIDAYGSAGMLKEAISLLHEM-----EQDGIQPDVISISTLLTACGRCRQPTKIGIILA 494
Query: 449 SLK 451
+ K
Sbjct: 495 AAK 497
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ALL Y G+ E+L + +K+ G ++Y ++ Y + EK +V +M+
Sbjct: 368 YNALLGAYASHGMHTEALETFKLLKQNGFKPDIVSYTSLLNAYGRSALPEKAREVFNEMR 427
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+N P+ SY I++YG+ L ++L EME Q I D + ST+
Sbjct: 428 KNACKPNKVSYNALIDAYGSAGMLKEAISLLHEME-QDGIQPDVISISTLLTACGRCRQP 486
Query: 260 EKAIIYLKKCEDIVSKSK----DALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR 315
K I L +KS+ + + YN I Y SLG+ + ++ + + K
Sbjct: 487 TKIGIILA-----AAKSRGIQLNTVAYNSGIGSYLSLGDYKKALELYTSMRTGNVKPDAV 541
Query: 316 DYITMLGSLVKIGELEE 332
Y ++ K+G +
Sbjct: 542 TYNILISGSCKLGSFRK 558
>gi|255546727|ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546418|gb|EEF47918.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 809
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 153/375 (40%), Gaps = 49/375 (13%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
VIR S + K A + M QG A V+ + + V L A +L+DE
Sbjct: 295 VIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKAL----ALHDE- 349
Query: 135 KVDKLYGALLNCYV---------REGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNT 185
V K G NC + + G+ E + ++ K+MG F YN +M
Sbjct: 350 MVSK--GVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKL 407
Query: 186 GQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGT 245
G+ E+ ++L++MK + PD +Y I+ Y + ++ N+ +EM+ H D T
Sbjct: 408 GKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGH-KPDIVT 466
Query: 246 YSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQ 305
Y+ +A + GL ++A+ L E K D + +N +I G D+ F+
Sbjct: 467 YNVLAGGFSRNGLTQEALSLLNYMETQGVKP-DTVTHNMIIEGLCIGGKVDDAQAFFDNL 525
Query: 306 KIKC-------------KKQLNR------------------DYITMLGSLVKIGELEEAE 334
+ KC +N+ + +LG+L G+ E+A
Sbjct: 526 EEKCLENYSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFFKLLGNLCSEGDSEKAL 585
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGY 394
+LE + + ++ Q G +EKA V +V +G P +++I+ GY
Sbjct: 586 CLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGY 645
Query: 395 ADKNNMEKAFECMKE 409
N M++A+ + +
Sbjct: 646 CRMNKMKEAWHVLGD 660
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 158/342 (46%), Gaps = 21/342 (6%)
Query: 137 DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGI---MCLYTNTGQHEKIPD 193
D Y + + R+G + E++ + + M+E G ++ +Y +CL+ G+ +
Sbjct: 219 DYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLH---GRSDLGFK 275
Query: 194 VLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYY 253
VL D+ +P D F+Y + I + + +L E++L+EME Q + D Y + + Y
Sbjct: 276 VLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQG-FAPDVYVYCALISGY 334
Query: 254 IIAGLKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMM-KFWGLQKIKCK 310
+ G KA L +++VSK + + + ++ + +G E+ +F +K+
Sbjct: 335 CMVGNLLKA---LALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIF 391
Query: 311 KQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADA 370
Y ++ +L K+G++EEA ++L E + D ++ GY KG + A
Sbjct: 392 FD-EACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALN 450
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSI 430
+ +E+ G P +++++A G++ ++A +L + E + +P + I
Sbjct: 451 IYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEAL-----SLLNYMETQGVKPDTVTHNMI 505
Query: 431 LDWLGDNRDVEEVEAFVSSLKIKVQKRNMYHALTEAHIRSGQ 472
++ L V++ +AF +L+ K + Y A+ + +
Sbjct: 506 IEGLCIGGKVDDAQAFFDNLEEKCLEN--YSAMVNGYCEANH 545
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 133/297 (44%), Gaps = 31/297 (10%)
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
L+N V VD ++++ +++K G + Y + + G + DV DM+E+G
Sbjct: 190 LMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESG 249
Query: 203 VPPDNFSYRICINSYG--ARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKE 260
V P++FSY I RS+L VLQ++ + I MD Y+ V I G
Sbjct: 250 VTPNSFSYTTFIEGLCLHGRSDLGF--KVLQDV-INAKIPMDVFAYTVV-----IRGFCS 301
Query: 261 KAIIYLKKCEDIVSK------SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN 314
+ + LK+ E I+ + + D Y LIS Y +GN ++K L K +
Sbjct: 302 E--MKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGN---LLKALALHDEMVSKGVK 356
Query: 315 RDYI---TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAV 371
+ + ++L L ++G E +E++ +D N+++ + G +E+A +
Sbjct: 357 TNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVEL 416
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVS 428
L E+ K P +++ + +GY K + +AL ++ E K KP +V+
Sbjct: 417 LVEMKGKKMVPDIINYTTVISGYFLKGK-------VVDALNIYREMKDIGHKPDIVT 466
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 78/394 (19%), Positives = 159/394 (40%), Gaps = 76/394 (19%)
Query: 49 PDV-SLTPVLDQWVLEGQKISELELQRVIRQLRSRKRF----------------KHALQV 91
PD+ + T V+ + L+G+ + L + R ++ + + + AL +
Sbjct: 427 PDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSL 486
Query: 92 SEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREG 151
+M QG+ H + ++ + ++ A+ +F++L E+K + Y A++N Y
Sbjct: 487 LNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNL--EEKCLENYSAMVNGYCEAN 544
Query: 152 LVDESLSLMQKM-------------KEMGSFGS---------------ALNYNGIMCLYT 183
V+++ +L+ ++ K +G+ S ALN N M +Y+
Sbjct: 545 HVNKAFALLIRLSKQGRILKKASFFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMYS 604
Query: 184 -------NTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQ 236
G+ EK V + + G+ PD +Y I IN Y +++ +VL +M+++
Sbjct: 605 KVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNR 664
Query: 237 SHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKD 296
I D TY+ + N L+ + D + ++ + + L S + K
Sbjct: 665 G-IEPDVITYTVLLNNCSKIDLRSSSSSL-----DAMKSKENMMDPSALWSEMKDMDIKP 718
Query: 297 EMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIIL 356
+++ + L CK +D I + ++ G D +L
Sbjct: 719 DVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAP----------------DTVTYTALL 762
Query: 357 LGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSII 390
GY G I+KA + E++ KG P ++ S++
Sbjct: 763 SGYCNVGNIKKAVVLFDEMLNKGIRPDAHTMSVL 796
>gi|168049914|ref|XP_001777406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671255|gb|EDQ57810.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 570
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 146/341 (42%), Gaps = 10/341 (2%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+++ LR ++++ + Q++E M G+ ++ + + ++A +F+ ++D
Sbjct: 49 MLKVLRRGQQWELSQQIAEDMINAGIRPDNITYSTLISCANRCNYQDAAMAWFDRMHDAQ 108
Query: 135 KVDK--LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
V Y +++ Y + G DE+++L + +K+ G + Y ++ L+ G
Sbjct: 109 CVPDAVTYSTMIDVYGKVGKYDEAVALYESVKKSGWKPDKVTYGTMVRLFGRAGYISAAV 168
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
+ +MK +G+ P + Y I I+ G + V QEM+ Q+ + + T STV
Sbjct: 169 SIFDEMKGSGIQPGSVVYNIMISCLGRAGRMGHALKVFQEMK-QAGVKPNAVTLSTVMEI 227
Query: 253 YIIAG-LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKK 311
Y +G + E I+ +D+ D + YN +I G E ++ + ++
Sbjct: 228 YSRSGKVMEGLGIFHHMRQDLAC---DIIVYNAVIKMCREAGLVPEAEQYLR-EMVEYGH 283
Query: 312 QLNR-DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADA 370
Q N Y M+ K G EA++M + + Y D +L GY EK
Sbjct: 284 QPNDWTYRNMISLYAKNGMAVEAQRMFSQLVEAGYQPDVMSYTSLLQGYGNAKDYEKVQE 343
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
+L E+V P W +I D + + FE ++ L
Sbjct: 344 ILHEMVSANCAPDERLWCVI-LNLLDACDTDVEFEILRSCL 383
>gi|15224262|ref|NP_179484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099137|sp|O64624.1|PP163_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g18940
gi|3004555|gb|AAC09028.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|15983785|gb|AAL10489.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|38564280|gb|AAR23719.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|330251736|gb|AEC06830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 146/325 (44%), Gaps = 16/325 (4%)
Query: 83 KRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLND--EDKVDKLY 140
+ ++ L V + M +GL F + L + L A+ +F L + Y
Sbjct: 260 RSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTY 319
Query: 141 GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKE 200
ALL + + G+ E+LS++++M+E ++ YN ++ Y G ++ V+ M +
Sbjct: 320 NALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTK 379
Query: 201 NGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKE 260
GV P+ +Y I++YG + + M+ + + TY+ V + + G K
Sbjct: 380 KGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVP-NTCTYNAVLS---LLGKKS 435
Query: 261 KAIIYLKKCEDIVSK--SKDALGYNHLISHYASLGNKDEMMKFWG--LQKIK-CKKQLNR 315
++ +K D+ S S + +N ++ A GNK M KF +++K C + +R
Sbjct: 436 RSNEMIKMLCDMKSNGCSPNRATWNTML---ALCGNKG-MDKFVNRVFREMKSCGFEPDR 491
Query: 316 D-YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
D + T++ + + G +A KM E + + N +L ++KG + V+ +
Sbjct: 492 DTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISD 551
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNN 399
+ KG PT S+S++ YA N
Sbjct: 552 MKSKGFKPTETSYSLMLQCYAKGGN 576
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 156/342 (45%), Gaps = 25/342 (7%)
Query: 71 ELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLD-----LIGKVRGLESAET 125
+L +++ L ++ A+ + EW L S + A++LD + ++ G ES +
Sbjct: 138 DLVSLVKGLDDSGHWERAVFLFEW-----LVLSSNSGALKLDHQVIEIFVRILGRESQYS 192
Query: 126 YFNSLNDEDKVD------KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM 179
L D+ + + Y +L+ Y R G ++++ L ++MKEMG + + YN I+
Sbjct: 193 VAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVIL 252
Query: 180 CLYTNTGQH-EKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSH 238
++ G+ KI VL +M+ G+ D F+ +++ L + E++S +
Sbjct: 253 DVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGY 312
Query: 239 ISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEM 298
TY+ + + AG+ +A+ LK+ E+ S D++ YN L++ Y G E
Sbjct: 313 -EPGTVTYNALLQVFGKAGVYTEALSVLKEMEE-NSCPADSVTYNELVAAYVRAGFSKEA 370
Query: 299 MKFWGLQKIKCKKQLNRD---YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNII 355
G+ ++ KK + + Y T++ + K G+ +EA K+ + + + N +
Sbjct: 371 A---GVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAV 427
Query: 356 LLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADK 397
L +K + +L ++ G +P +W+ + A +K
Sbjct: 428 LSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNK 469
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 136/329 (41%), Gaps = 54/329 (16%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +++ Y + G DE+L L MKE G + YN ++ L + ++ +L DMK
Sbjct: 389 YTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMK 448
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYY------ 253
NG P+ ++ + G + + V +EM+S D T++T+ + Y
Sbjct: 449 SNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKS-CGFEPDRDTFNTLISAYGRCGSE 507
Query: 254 ----------IIAGLKEKAIIY------------LKKCEDIVSKSKDA------LGYNHL 285
AG Y + E+++S K Y+ +
Sbjct: 508 VDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLM 567
Query: 286 ISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI------TMLGSLVKIGELEEAEKMLEE 339
+ YA GN + G+++I+ + + + + T+L + K L +E+
Sbjct: 568 LQCYAKGGN------YLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTL 621
Query: 340 WELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNN 399
++ Y D + N +L +++ M ++A+ +L+ I + G +P +++ + Y +
Sbjct: 622 FKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGE 681
Query: 400 MEKAFECMKEALAVHEENKFWRPKPSLVS 428
KA +E L E+++ KP LVS
Sbjct: 682 CWKA----EEILKTLEKSQL---KPDLVS 703
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 87/201 (43%), Gaps = 18/201 (8%)
Query: 116 KVRGLESAETYFNSLNDED-KVDK-LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
K R L +E F K D ++ ++L+ + R + D++ +++ ++E G +
Sbjct: 608 KCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLV 667
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
YN +M +Y G+ K ++L ++++ + PD SY I + R + +L EM
Sbjct: 668 TYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEM 727
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIV------SKSKDALGYNHLIS 287
++ I TY+T + Y G+ + ED++ + L + ++
Sbjct: 728 -TERGIRPCIFTYNTFVSGYTAMGM-------FAEIEDVIECMAKNDCRPNELTFKMVVD 779
Query: 288 HYASLGNKDEMMKFWGLQKIK 308
Y G E M F + KIK
Sbjct: 780 GYCRAGKYSEAMDF--VSKIK 798
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 112/277 (40%), Gaps = 52/277 (18%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ALLN R+ G + S N V+ DMK
Sbjct: 529 YNALLNALARK----------------GDWRSGEN-------------------VISDMK 553
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G P SY + + Y +E + ++ + I W T+ ++A K
Sbjct: 554 SKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIK-EGQIFPSWMLLRTL----LLANFK 608
Query: 260 EKAIIYLKKCEDIVSK---SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
+A+ ++ + K D + +N ++S + D+ L+ I+ + L+ D
Sbjct: 609 CRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGI--LESIR-EDGLSPD 665
Query: 317 YIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
+T ++ V+ GE +AE++L+ E S D N ++ G+ ++G++++A +L
Sbjct: 666 LVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLS 725
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKN---NMEKAFECM 407
E+ ++G P +++ +GY +E ECM
Sbjct: 726 EMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECM 762
>gi|224089785|ref|XP_002308813.1| predicted protein [Populus trichocarpa]
gi|222854789|gb|EEE92336.1| predicted protein [Populus trichocarpa]
Length = 270
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 85/177 (48%), Gaps = 7/177 (3%)
Query: 59 QWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVR 118
+W L+ S L IR + F L VSE M G+ ++ + + LD +G+ +
Sbjct: 9 EWRLDATTFSTL-----IRIYKVAGNFDGYLNVSEEMKALGVKPNLVIYNILLDAMGRAK 63
Query: 119 GLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYN 176
+ ++ + D + ALL+ Y R D++ + ++MKE G + + YN
Sbjct: 64 RPWQVKKFYQDIIDNGLSPSFVTFAALLHAYGRARYGDDAFKIYREMKEKGLGLNVVLYN 123
Query: 177 GIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
I+ + + G +K ++ DMK +G+ PD++++ I + ++S +EN L EM
Sbjct: 124 SILAMCADLGHVDKAVEIFEDMKSSGIKPDSWTFSSMITIFSCCGKVSEVENTLNEM 180
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 114/261 (43%), Gaps = 37/261 (14%)
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
+++ + + G VD++ L+ ++ G +A YN ++ YT + + +L +M+ G
Sbjct: 154 VVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMENRG 213
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
V P +Y I ++ ++S +E V EM+ + +++ D YS V N Y G +A
Sbjct: 214 VEPTVGTYTILVDGLSRAGDISKVEAVYDEMK-RKNVAGDVYFYSAVINAYCRGGNVRRA 272
Query: 263 IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLG 322
+C + H G++ + R Y ++
Sbjct: 273 SEVFDEC----------------VGH--------------GVEPNE------RTYGALIN 296
Query: 323 SLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTP 382
KIG++E AE +L + +L ++ V N ++ GY + GM+EKA + + K G
Sbjct: 297 GFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIEL 356
Query: 383 TPNSWSIIAAGYADKNNMEKA 403
+++ +A G N ME A
Sbjct: 357 DIYTYNTLACGLCRVNRMEDA 377
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/342 (19%), Positives = 134/342 (39%), Gaps = 44/342 (12%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMG-------------------------------- 167
Y +LL+ Y R+ D L+++M+ G
Sbjct: 186 YNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMK 245
Query: 168 ---SFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELS 224
G Y+ ++ Y G + +V + +GV P+ +Y IN + ++
Sbjct: 246 RKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIE 305
Query: 225 SMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNH 284
+ E +L +M+ + + + ++T+ + Y G+ EKA + +K + + D YN
Sbjct: 306 AAEMLLADMQLRG-VGHNQIVFNTMIDGYCRHGMVEKA-LEIKAVMEKMGIELDIYTYNT 363
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSC 344
L + ++ K + K Y T++ K G++ EA ++ + E
Sbjct: 364 LACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKG 423
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
N+++ GY + G I +A+ KE+ KKG P +++ + G+ ++
Sbjct: 424 SRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDV-- 481
Query: 405 ECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAF 446
AL + EE K KP++V+ G ++ EAF
Sbjct: 482 -----ALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAF 518
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 107/257 (41%), Gaps = 4/257 (1%)
Query: 86 KHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFN--SLNDEDKVDKLYGAL 143
+ A +V + G G+ + + ++ K+ +E+AE L ++ +
Sbjct: 270 RRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTM 329
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
++ Y R G+V+++L + M++MG YN + C + E +L M E GV
Sbjct: 330 IDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGV 389
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAI 263
P+ SY I+ + ++ + ++ME + TY+ + + YI G +A
Sbjct: 390 APNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGS-RPSVVTYNVMIDGYIKNGSIREAE 448
Query: 264 IYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGS 323
+ K+ E D Y L+ + G D ++ + K + K Y ++
Sbjct: 449 RFKKEMEK-KGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSG 507
Query: 324 LVKIGELEEAEKMLEEW 340
L K G EEA ++ ++
Sbjct: 508 LAKEGRSEEAFQLYDDM 524
>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 89/406 (21%), Positives = 158/406 (38%), Gaps = 58/406 (14%)
Query: 83 KRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--- 139
K K A +V E M+G+G+ V + VRGL ++ DK++
Sbjct: 295 KWLKEAAEVIELMTGKGMLPDVWTYNTM------VRGLCDEGKIDEAVRLRDKMESFKLV 348
Query: 140 -----YGALLN-CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPD 193
Y L++ C+ G D + L+++MK G + + +N ++ + G+ ++ +
Sbjct: 349 PDVVTYNTLIDGCFEHRG-SDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASN 407
Query: 194 VLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYY 253
V++ M E+G PD F+Y IN Y +++ ++ EM + + +D T +T+ +
Sbjct: 408 VMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEM-GRKGLKLDTFTLNTLLHTM 466
Query: 254 IIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQL 313
+ + A K D + Y LI Y D +K W K
Sbjct: 467 CLEKQLDDAYTLTMKARK-RGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVAT 525
Query: 314 NRDYITMLGSLVKIGELEEAEKMLEEWE--------------LSCYCY------------ 347
Y T++ L G+ ++A L E + YC+
Sbjct: 526 IITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHN 585
Query: 348 ---------DFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKN 398
D NI+L G ++GM+EK + + KGK +++II + + +
Sbjct: 586 KMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKER 645
Query: 399 NMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVE 444
+E AF+ M E E K P ++I+ L EE E
Sbjct: 646 RLEDAFDLMTEM-----EGKNLEPDRYTYNAIVTGLTKAGRTEEAE 686
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 105/240 (43%), Gaps = 2/240 (0%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ L++ Y + +E+L L+ +M E G + YN ++ Q ++ D+LL MK
Sbjct: 214 FNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMK 273
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+G+ P+ +Y I ++ Y L V++ M + + W TY+T+ G
Sbjct: 274 NSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVW-TYNTMVRGLCDEGKI 332
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
++A+ K E D + YN LI D K K + K+ +
Sbjct: 333 DEAVRLRDKMESF-KLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNI 391
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
M+ G+++EA ++ + S + D N ++ GY + G + +A ++ E+ +KG
Sbjct: 392 MIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKG 451
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 126/274 (45%), Gaps = 11/274 (4%)
Query: 142 ALLNCYVREGLVDE---SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
LLN VR S + Q ++G + +N ++ Y + E+ ++ M
Sbjct: 178 TLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQM 237
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYI-IAG 257
E G PDN +Y + + RS+L+ + ++L +M++ S + + TY+ + + Y +
Sbjct: 238 GEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKN-SGLFPNRNTYNILVHGYCKLKW 296
Query: 258 LKEKA-IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWG-LQKIKCKKQLNR 315
LKE A +I L + ++ D YN ++ G DE ++ ++ K +
Sbjct: 297 LKEAAEVIELMTGKGMLP---DVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDV-V 352
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
Y T++ + + A K++EE + + NI++ + +G I++A V+ ++
Sbjct: 353 TYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKM 412
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
V+ G +P +++ + GY M +A++ M E
Sbjct: 413 VESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDE 446
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 87/202 (43%), Gaps = 12/202 (5%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
YG L+ Y ++ D +L L ++MKE G + + YN I+ +G+ ++ D L ++
Sbjct: 494 YGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELL 553
Query: 200 ENGVPPDNFSYRICINSY---GARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
E G+ PD + I I+ Y GA + N + E + D T + +
Sbjct: 554 EKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHS----LKPDIFTCNILLRGLCRE 609
Query: 257 GLKEKAIIYLKKCEDIVSKSK--DALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN 314
G+ EK + +SK K D + YN +IS + ++ + K +
Sbjct: 610 GMLEKGLTLF---NTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDR 666
Query: 315 RDYITMLGSLVKIGELEEAEKM 336
Y ++ L K G EEAEK+
Sbjct: 667 YTYNAIVTGLTKAGRTEEAEKL 688
Score = 38.5 bits (88), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 85/180 (47%), Gaps = 11/180 (6%)
Query: 282 YNHLISHYASLGNKDEMMKFWG-LQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEW 340
+N LI Y S N +E ++ + + C N Y T+L +L K +L + +L +
Sbjct: 214 FNILIHGYCSDNNTEEALRLINQMGEYGCCPD-NVTYNTVLTALCKRSQLTQVRDLLLQM 272
Query: 341 ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNM 400
+ S + NI++ GY + +++A V++ + KG P +++ + G D+ +
Sbjct: 273 KNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKI 332
Query: 401 EKAFECMKEALAVHEENKFWRPKPSLVS--SILDWLGDNRDVEEVEAFVSSLKIKVQKRN 458
+ EA+ + ++ + ++ P +V+ +++D ++R + V +K + K N
Sbjct: 333 D-------EAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKEN 385
>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 447
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 76/379 (20%), Positives = 158/379 (41%), Gaps = 42/379 (11%)
Query: 29 RAVKP--VARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFK 86
+ ++P V N L + LG S + VL + + G + + L +++ L + K
Sbjct: 94 KGIEPNLVTLNILINCFCHLGQMAFSFS-VLGKILKLGYQPDTITLNTLMKGLCLKGEVK 152
Query: 87 HALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDK--LYGALL 144
+L + + QG + + L+ + K+ A + D +Y ++
Sbjct: 153 RSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTII 212
Query: 145 NCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVP 204
+ ++ +V+++ +M G F + + Y+ ++ + GQ +L +M +
Sbjct: 213 DGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNIN 272
Query: 205 PDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAII 264
P+ ++Y I I++ ++ + +L EM + + D TY++V
Sbjct: 273 PNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPA-DVVTYNSVL-------------- 317
Query: 265 YLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSL 324
D + KS++ + +L K MK WG+Q K Y ++ L
Sbjct: 318 ------DGLCKSQN-------LDKATALFMK---MKKWGIQPNK------YTYTALIDGL 355
Query: 325 VKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTP 384
K G L+ A+K+ + + C D R N+++ G ++GM +KA A+ ++ G P
Sbjct: 356 CKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNA 415
Query: 385 NSWSIIAAGYADKNNMEKA 403
++ II +K+ +KA
Sbjct: 416 VTFDIIIRSLFEKDENDKA 434
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 143/343 (41%), Gaps = 35/343 (10%)
Query: 74 RVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE 133
RV+ ++RS H L S S GLA S V V GL + +N
Sbjct: 211 RVLPKVRSCNELLHRLSKS---SKGGLALSFFKDMV-------VAGLSPSVFTYN----- 255
Query: 134 DKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPD 193
++ C REG ++ + SL ++MK G + YN ++ Y G
Sbjct: 256 --------MVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVS 307
Query: 194 VLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYY 253
V +MK+ G PD +Y IN + + L M+ Q + + TYST+ + +
Sbjct: 308 VFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMK-QRGLQPNVVTYSTLIDAF 366
Query: 254 IIAGLKEKAIIYLKKCEDI--VSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKK 311
AG+ +A + D+ V + Y LI +G+ +E K L+ +
Sbjct: 367 CKAGMLLEANKFFV---DMIRVGLQPNEFTYTSLIDANCKIGDLNEAFK---LESEMQQA 420
Query: 312 QLNRDYIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKA 368
+N + +T +L L + G + EAE++ + + + ++ + GY + M+EKA
Sbjct: 421 GVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKA 480
Query: 369 DAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
+L+E+ KK P + G +N +E + ++E +
Sbjct: 481 MDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMM 523
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 142/332 (42%), Gaps = 13/332 (3%)
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
+LS + M G S YN ++ G E + +MK G+ PD +Y I+
Sbjct: 235 ALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLID 294
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK 275
YG L+ +V +EM+ + D TY+++ N + +A YL +
Sbjct: 295 GYGKVGMLTGAVSVFEEMK-DAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQ-RGL 352
Query: 276 SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR-DYITMLGSLVKIGELEEAE 334
+ + Y+ LI + G E KF+ + I+ Q N Y +++ + KIG+L EA
Sbjct: 353 QPNVVTYSTLIDAFCKAGMLLEANKFF-VDMIRVGLQPNEFTYTSLIDANCKIGDLNEAF 411
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGY 394
K+ E + + + +L G + G + +A+ + ++K G T ++ + GY
Sbjct: 412 KLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGY 471
Query: 395 ADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKV 454
MEKA + ++E K +P L + + L ++E+ A + +
Sbjct: 472 IKAKMMEKAMDILEEM-----NKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCG 526
Query: 455 QKRN--MYHALTEAHIRSGQEVDG--LLESMK 482
N +Y L +A+ + G+ + LL+ M+
Sbjct: 527 LTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQ 558
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 90/448 (20%), Positives = 177/448 (39%), Gaps = 61/448 (13%)
Query: 31 VKPVAR--NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHA 88
V P R N L R+S ++L+ D V+ G S VI L + A
Sbjct: 212 VLPKVRSCNELLHRLSKSSKGGLALSFFKDM-VVAGLSPSVFTYNMVIGCLAREGDLEAA 270
Query: 89 LQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNC 146
+ E M +GL + + +D GKV L A + F + D + Y +L+NC
Sbjct: 271 RSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINC 330
Query: 147 YVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPD 206
+ + + ++ + MK+ G + + Y+ ++ + G + +DM G+ P+
Sbjct: 331 FCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPN 390
Query: 207 NFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYL 266
F+Y I++ +L+ + EM+ Q+ ++++ TY+ ++ GL E +
Sbjct: 391 EFTYTSLIDANCKIGDLNEAFKLESEMQ-QAGVNLNIVTYTA-----LLDGLCEDG--RM 442
Query: 267 KKCEDIVSKSKDALGYNHLISHYASLGN---KDEMM------------------------ 299
++ E++ A G+ Y SL + K +MM
Sbjct: 443 REAEELFGALLKA-GWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGT 501
Query: 300 KFWGLQK--------------IKCKKQLNR-DYITMLGSLVKIGELEEAEKMLEEWELSC 344
K WGL + + C N Y T++ + K+G+ EA +L+E +
Sbjct: 502 KIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLG 561
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
+++ G + G++++A + + G P ++ + G + +E+A
Sbjct: 562 IKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAK 621
Query: 405 ECMKEALAVHEENKFWRPKPSLVSSILD 432
E L +K P + +S++D
Sbjct: 622 NLFNEML-----DKGISPDKLVYTSLID 644
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 73/363 (20%), Positives = 159/363 (43%), Gaps = 47/363 (12%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV--DKLYGALLN 145
A ++ M G+ ++ + LD + + + AE F +L ++Y +L +
Sbjct: 410 AFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFH 469
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
Y++ ++++++ ++++M + L Y + + E V+ +M + G+
Sbjct: 470 GYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTA 529
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
+++ Y I++Y + + N+LQEM+ I + TY + + GL ++A+ Y
Sbjct: 530 NSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLG-IKITVVTYGVLIDGLCKIGLVQQAVRY 588
Query: 266 LKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIK------CKKQLNRD--- 316
+++ L N +I Y +L D + K L++ K K ++ D
Sbjct: 589 FDH------MTRNGLQPNIMI--YTAL--IDGLCKNDCLEEAKNLFNEMLDKGISPDKLV 638
Query: 317 YITMLGSLVKIGELEEA----EKMLE---EWELSCYCYDFRVPNIILLGYSQKGMIEKAD 369
Y +++ +K G EA +M+E E +L Y ++ G+S+ G ++ A
Sbjct: 639 YTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAY-------TSLIWGFSRYGQVQLAK 691
Query: 370 AVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSS 429
++L E+++KG P + Y + + + EALA+H++ + L+S
Sbjct: 692 SLLDEMLRKGIIPDQVLCICLLRKYYELGD-------INEALALHDD----MARRGLISG 740
Query: 430 ILD 432
+D
Sbjct: 741 TID 743
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 82/184 (44%), Gaps = 5/184 (2%)
Query: 64 GQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESA 123
G KI+ + +I L + A++ + M+ GL ++ + +D + K LE A
Sbjct: 561 GIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEA 620
Query: 124 ETYFNSLNDED-KVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCL 181
+ FN + D+ DKL Y +L++ ++ G E+LSL +M E+G Y ++
Sbjct: 621 KNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWG 680
Query: 182 YTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISM 241
++ GQ + +L +M G+ PD +CI EL + L + + +
Sbjct: 681 FSRYGQVQLAKSLLDEMLRKGIIPDQV---LCICLLRKYYELGDINEALALHDDMARRGL 737
Query: 242 DWGT 245
GT
Sbjct: 738 ISGT 741
>gi|168036199|ref|XP_001770595.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678116|gb|EDQ64578.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 743
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 93/197 (47%), Gaps = 4/197 (2%)
Query: 109 VQLDLIGKVRGLESAETYFNSLNDEDKVDKL-YGALLNCYVREGLVDESLSLMQKMKEMG 167
V +DL GK L+ A DK+ + L+N Y ++ + + +M+ G
Sbjct: 541 VMIDLYGKSGMLDRARDASKLAQQLGVADKITFSTLINSYGKKQDFRNMEATLWEMQNAG 600
Query: 168 SFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSME 227
GS YN ++ Y G +K+ DV+ M+++G+ D SY I IN YG ++++ ME
Sbjct: 601 HGGSLEAYNCVLDAYGKAGHLDKLEDVIARMEKSGLQMDLASYNILINIYGRHTKIAEME 660
Query: 228 NVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLIS 287
+ +M+ + I W TY+T+ Y A +KA+ K +D D + Y L++
Sbjct: 661 ALFHKMQEEGFIPDRW-TYNTMIRTYGYADYPDKAVDTFKMMQD-SGIMPDRVTYVMLVA 718
Query: 288 HYASLGNKDEMMKFWGL 304
+ GN E + W L
Sbjct: 719 AFEKAGNLLEAAR-WSL 734
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 106/244 (43%), Gaps = 31/244 (12%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
YG LL+ Y++ L E+LS+ M++ G ++C + G E +V DM+
Sbjct: 328 YGTLLHVYLKCNLQKEALSVFSAMRKAGMAPKEYMCRSLICACKDAGMFEDATNVFRDMQ 387
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
GV P + IN +G + ++ E + + + S S +D Y+ + N Y+ G+
Sbjct: 388 SAGVVPSLETSCTMINVHGLKGDVKQAEELFRSLRS-SVSKLDIIAYNVIINVYMRYGMH 446
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLI--SHYASLGNKDEMMKFWGLQ-------KIKCK 310
E+A K E+ D+ Y+ ++ +L + E + +W L+ ++ C
Sbjct: 447 EEAFRIYKLMEEEDGLLPDSYTYHSMLRMCQKCNLQTQAEEI-YWRLRNSDVELDEVMCN 505
Query: 311 KQLNRDYITMLGSLVKIGELEEAEKMLEEW-ELSCYCYDFRVPNIILLG-----YSQKGM 364
LN + + LEE K+ +E ++ C +PN I Y + GM
Sbjct: 506 CVLN--------TCARFLPLEEVHKIFQEMIDVGC------IPNTITFNVMIDLYGKSGM 551
Query: 365 IEKA 368
+++A
Sbjct: 552 LDRA 555
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 139/360 (38%), Gaps = 43/360 (11%)
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE----DKVDKL 139
+ + A + + M G+ V + + GK E A F + + D+V
Sbjct: 165 KIEEAEHIMDTMERLGMHLGVVGYNSMITAYGKAGLYEKALRLFEKMKEAGLEPDEVT-- 222
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ++ R G + ++L Q MK +G ++ N+N ++ LY I VL DMK
Sbjct: 223 YSCMIGACGRAGKLRDALDYFQAMKRLGIMPASSNFNTLISLYGKARNVVGIVRVLADMK 282
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G PD+ + + +Y + + VL + + D +Y T+ + Y+ L+
Sbjct: 283 NFGCTPDSQTLDAVVRAYERAGQTKKVVQVLSLLREAGWVE-DTESYGTLLHVYLKCNLQ 341
Query: 260 EKAIIYLKK------------CEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKI 307
++A+ C ++ KDA + +D F +Q
Sbjct: 342 KEALSVFSAMRKAGMAPKEYMCRSLICACKDAGMF------------EDATNVFRDMQSA 389
Query: 308 KCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEK 367
L TM+ G++++AE++ S D N+I+ Y + GM E+
Sbjct: 390 GVVPSLETS-CTMINVHGLKGDVKQAEELFRSLRSSVSKLDIIAYNVIINVYMRYGMHEE 448
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLV 427
A + K ++++ P+S++ Y M C K L E +WR + S V
Sbjct: 449 AFRIYK-LMEEEDGLLPDSYT-----YHSMLRM-----CQKCNLQTQAEEIYWRLRNSDV 497
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 112/279 (40%), Gaps = 30/279 (10%)
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
+N Y ++G ++E+ +M M+ +G + YN ++ Y G +EK + MKE G+
Sbjct: 157 MNTYGQQGKIEEAEHIMDTMERLGMHLGVVGYNSMITAYGKAGLYEKALRLFEKMKEAGL 216
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMES----------QSHISMDWGTYSTVANYY 253
PD +Y I + G +L + Q M+ + IS+ + V
Sbjct: 217 EPDEVTYSCMIGACGRAGKLRDALDYFQAMKRLGIMPASSNFNTLISLYGKARNVVGIVR 276
Query: 254 IIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASL----GNKDEMMKFWGLQKIKC 309
++A +K + D V ++ + G + SL G ++ + L +
Sbjct: 277 VLADMKNFGCTPDSQTLDAVVRAYERAGQTKKVVQVLSLLREAGWVEDTESYGTLLHVYL 336
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKAD 369
K L ++ +++ ++ K G + E M L C C D GM E A
Sbjct: 337 KCNLQKEALSVFSAMRKAG-MAPKEYMCR--SLICACKD-------------AGMFEDAT 380
Query: 370 AVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMK 408
V +++ G P+ + + + K ++++A E +
Sbjct: 381 NVFRDMQSAGVVPSLETSCTMINVHGLKGDVKQAEELFR 419
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 86/177 (48%), Gaps = 16/177 (9%)
Query: 121 ESAETYFNSLNDEDKVDK-LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM 179
++ E Y+ N + ++D+ + +LN R ++E + Q+M ++G + + +N ++
Sbjct: 484 QAEEIYWRLRNSDVELDEVMCNCVLNTCARFLPLEEVHKIFQEMIDVGCIPNTITFNVMI 543
Query: 180 CLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHI 239
LY +G ++ D ++ GV D ++ INSYG + + +ME L EM++ H
Sbjct: 544 DLYGKSGMLDRARDASKLAQQLGV-ADKITFSTLINSYGKKQDFRNMEATLWEMQNAGH- 601
Query: 240 SMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSK------DALGYNHLISHYA 290
Y+ V + Y AG +L K ED++++ + D YN LI+ Y
Sbjct: 602 GGSLEAYNCVLDAYGKAG-------HLDKLEDVIARMEKSGLQMDLASYNILINIYG 651
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 78/385 (20%), Positives = 157/385 (40%), Gaps = 51/385 (13%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ++ Y + G V+++ M + G Y+ ++ +YT G EK ++ DM
Sbjct: 84 YSMMMLLYQKNGKVEDAEVAFSHMLQSG-IQVVAAYSAMIAIYTRCGFFEKAEKIMEDMW 142
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGT--YSTVANYYIIAG 257
+ + PD ++ +N+YG + ++ E+++ ME + M G Y+++ Y AG
Sbjct: 143 NHKIAPDRDNWLKQMNTYGQQGKIEEAEHIMDTME---RLGMHLGVVGYNSMITAYGKAG 199
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
L EKA+ +K ++ D + Y+ +I G + + ++ K + ++
Sbjct: 200 LYEKALRLFEKMKE-AGLEPDEVTYSCMIGACGRAGKLRDALDYFQAMKRLGIMPASSNF 258
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
T++ K + ++L + + D + + ++ Y + G +K VL + +
Sbjct: 259 NTLISLYGKARNVVGIVRVLADMKNFGCTPDSQTLDAVVRAYERAGQTKKVVQVLSLLRE 318
Query: 378 KGKTPTPNSWSII---------------------AAGYADKNNMEKAFEC-MKEALAVHE 415
G S+ + AG A K M ++ C K+A +
Sbjct: 319 AGWVEDTESYGTLLHVYLKCNLQKEALSVFSAMRKAGMAPKEYMCRSLICACKDAGMFED 378
Query: 416 ENKFWRPK------PSLVSS--ILDWLGDNRDVEEVEAFVSSLKIKVQKRNM--YHALTE 465
+R PSL +S +++ G DV++ E SL+ V K ++ Y+ +
Sbjct: 379 ATNVFRDMQSAGVVPSLETSCTMINVHGLKGDVKQAEELFRSLRSSVSKLDIIAYNVIIN 438
Query: 466 AHIRSG------------QEVDGLL 478
++R G +E DGLL
Sbjct: 439 VYMRYGMHEEAFRIYKLMEEEDGLL 463
>gi|125580966|gb|EAZ21897.1| hypothetical protein OsJ_05550 [Oryza sativa Japonica Group]
Length = 595
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 142/344 (41%), Gaps = 44/344 (12%)
Query: 71 ELQRVIRQLRSRKRFKHALQVSEW-MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNS 129
+L V Q R K++ + V EW + + + + ++ GK R L AE+ + +
Sbjct: 141 DLVNVAVQFRMNKKWDLIIPVCEWILYRSSFRPDIICYNLLIESYGKKRQLNKAESIYMA 200
Query: 130 LNDEDKV--DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQ 187
L + V + Y LL Y G + + ++ +M+E G +A YN +
Sbjct: 201 LLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARC 260
Query: 188 HEKIPDVLLDMKENGVPPDNFSYRICINSYG-ARSELSSMENVLQEMESQSHISMDWGTY 246
EK +V MK + ++ + IN YG A+ +SSM+ V EM+S + TY
Sbjct: 261 TEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMK-VFNEMKSIG-CKPNICTY 318
Query: 247 STVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGL-Q 305
+ + N + GL EKA ++ + D YN L+ Y+ G + + L Q
Sbjct: 319 TALVNAFAREGLCEKAEEVFEEMQQ-AGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQ 377
Query: 306 KIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMI 365
+ C E + + Y NI++ Y + G+
Sbjct: 378 HMGC-----------------------------EPDRASY-------NILVDAYGRAGLH 401
Query: 366 EKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
E A+AV +E+ ++G +PT S ++ A +A N + E M +
Sbjct: 402 EDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQ 445
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/323 (17%), Positives = 137/323 (42%), Gaps = 17/323 (5%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLN 145
A++V + M + + + +++ GK + S+ FN + + Y AL+N
Sbjct: 264 AVEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVN 323
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
+ REGL +++ + ++M++ G YN +M Y+ G + ++ M+ G P
Sbjct: 324 AFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEP 383
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
D SY I +++YG E V +E++ + G T+ ++ ++ ++
Sbjct: 384 DRASYNILVDAYGRAGLHEDAEAVFEELKQR-------GMSPTMKSHMLLLAAHARS-GN 435
Query: 266 LKKCEDIVSK------SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
+CE+++++ + D N +++ YA G D+M + + + + + Y
Sbjct: 436 ATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLFAAMERRGDADVG-TYNV 494
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
+ + + G + E D + Y+++ + +++E+V G
Sbjct: 495 AVNAYGRAGYVGRMEAAFAAVAARGLAADVVTWTARMGAYARRKEYGRCVGMVEEMVDAG 554
Query: 380 KTPTPNSWSIIAAGYADKNNMEK 402
P + ++ A +D+ +E+
Sbjct: 555 CYPDAGTARVLLAACSDERQVEQ 577
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 127/309 (41%), Gaps = 44/309 (14%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+ Y ++ ++++ S+ + E + Y ++ Y N G + V+ +M+
Sbjct: 178 YNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMR 237
Query: 200 ENGVPPDNFSYR-----------------------------------ICINSYG-ARSEL 223
E+G+PP+ Y + IN YG A+ +
Sbjct: 238 EHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPM 297
Query: 224 SSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYN 283
SSM+ V EM+S + TY+ + N + GL EKA ++ + D YN
Sbjct: 298 SSMK-VFNEMKSIG-CKPNICTYTALVNAFAREGLCEKAEEVFEEMQQ-AGHEPDVYAYN 354
Query: 284 HLISHYASLGNKDEMMKFWGL-QKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWEL 342
L+ Y+ G + + L Q + C+ Y ++ + + G E+AE + EE +
Sbjct: 355 ALMEAYSRAGLPQGASEIFSLMQHMGCEPD-RASYNILVDAYGRAGLHEDAEAVFEELKQ 413
Query: 343 SCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADK---NN 399
+ ++L +++ G + + V+ ++ K G TP + + + YA ++
Sbjct: 414 RGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDD 473
Query: 400 MEKAFECMK 408
ME+ F M+
Sbjct: 474 MERLFAAME 482
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 106/263 (40%), Gaps = 46/263 (17%)
Query: 205 PDNFSYRICINSYGARSELSSMENV-LQEMESQSHISMDWGTYSTVANYYIIA------- 256
PD Y + I SYG + +L+ E++ + +E+Q + D TY+ + Y A
Sbjct: 173 PDIICYNLLIESYGKKRQLNKAESIYMALLEAQCVPTED--TYALLLRAYCNAGSLHRAE 230
Query: 257 ---------GLKEKAIIY------------LKKCEDIVSKSK------DALGYNHLISHY 289
G+ A +Y +K ++ + K + + +I+ Y
Sbjct: 231 GVISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVY 290
Query: 290 ASLGNKDEMMK-FWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYD 348
MK F ++ I CK + Y ++ + + G E+AE++ EE + + + D
Sbjct: 291 GKAKQPMSSMKVFNEMKSIGCKPNIC-TYTALVNAFAREGLCEKAEEVFEEMQQAGHEPD 349
Query: 349 FRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMK 408
N ++ YS+ G+ + A + + G P S++I+ Y E
Sbjct: 350 VYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHE------- 402
Query: 409 EALAVHEENKFWRPKPSLVSSIL 431
+A AV EE K P++ S +L
Sbjct: 403 DAEAVFEELKQRGMSPTMKSHML 425
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/406 (20%), Positives = 170/406 (41%), Gaps = 60/406 (14%)
Query: 90 QVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCY 147
+V +M G G++ V+ ++ ++ KVR LESA+ + + + Y L+
Sbjct: 229 KVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGL 288
Query: 148 VREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDN 207
R G ++E+ ++M++ G Y I+ G+ ++ +L +M G+ P+
Sbjct: 289 CRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNV 348
Query: 208 FSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLK 267
Y I+ + + +++EM S + + + TY + G +A LK
Sbjct: 349 VVYSTLIDGFMRQGNADEAFKIVKEM-SAAGVQPNKITYDNLIRGLCKLGRMGRASRILK 407
Query: 268 KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD---YITMLGSL 324
+ I D + YN +I + NK+E F L +++ K ++ + Y ++ L
Sbjct: 408 QMTKI-GYMADTMTYNLVIEGHLRQHNKEE--AFLLLNEMR-KGGISPNVYTYSIIINGL 463
Query: 325 VKIGELEEAEKMLEE-------------------------WELSC--------------- 344
+IGE E A +LE+ + L+C
Sbjct: 464 CQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDL 523
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
YCY N +++G S G +++A E+++KG P ++ + GY+ N+EKA
Sbjct: 524 YCY-----NSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAE 578
Query: 405 ECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL 450
+ + + L N P + + IL+ + ++E+V + + S+
Sbjct: 579 QLLHQML-----NSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSM 619
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 132/283 (46%), Gaps = 6/283 (2%)
Query: 129 SLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQH 188
S +D+ + + L++ Y + G V + ++ MK++G S NG++
Sbjct: 165 SGSDQGRRPVVLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADAL 224
Query: 189 EKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYST 248
+ + V M+ G+ PD ++Y I +Y +L S + V++EM ++ S++ TY+T
Sbjct: 225 DLLWKVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMR-ETGCSLNVVTYNT 283
Query: 249 VANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIK 308
+ AG E+A Y K+ ED D Y +I+ G D+ L ++
Sbjct: 284 LIGGLCRAGAIEEAFGYKKEMED-YGLVPDGFTYGAIINGLCKRGRPDQAKCL--LDEMS 340
Query: 309 CKKQLNR--DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIE 366
C + Y T++ ++ G +EA K+++E + + + ++ G + G +
Sbjct: 341 CAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMG 400
Query: 367 KADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
+A +LK++ K G +++++ G+ ++N E+AF + E
Sbjct: 401 RASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNE 443
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 117/283 (41%), Gaps = 22/283 (7%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+Y L++ Y REG + ++KM YN ++ +N G+ ++ + +M
Sbjct: 490 VYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEM 549
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
E G P++F+Y I+ Y L E +L +M + D+ Y+ + Y +
Sbjct: 550 LEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDF-IYAQILEGYFKSDN 608
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD-- 316
EK LK + + L Y +I + +S G+ + + + K L D
Sbjct: 609 LEKVSSTLKSMLEKGLMPDNRL-YGIVIHNLSSSGHMQAAVSVLSVIE---KNGLVPDSL 664
Query: 317 -YITMLGSLVKIGELEEAEKMLEEWE-------LSCYCYDFRVPNIILLGYSQKGMIEKA 368
Y +++ K ++E+A +L+E +SCY N ++ G+ + I A
Sbjct: 665 IYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCY-------NALIDGFCKSDDISHA 717
Query: 369 DAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
+ I+ KG P +++ + GY ++ A + E L
Sbjct: 718 RNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEML 760
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 120/288 (41%), Gaps = 32/288 (11%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +L+ G +DE++ +M E G + Y G++ Y+ G EK +L M
Sbjct: 526 YNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQML 585
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+G+ P++F Y + Y L + + L+ M + + D Y V + +G
Sbjct: 586 NSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMP-DNRLYGIVIHNLSSSGHM 644
Query: 260 EKAIIYLKKCEDIVSKS---KDALGYNHLISHYA-------SLGNKDEMMKFWGLQKIKC 309
+ A+ L ++ K+ D+L Y LIS + ++G DEM K I C
Sbjct: 645 QAAVSVLS----VIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISC 700
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEE-----WELSCYCYDFRVPNIILLGYSQKGM 364
Y ++ K ++ A + +C Y ++ GY + G
Sbjct: 701 -------YNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTY-----TTLIDGYCKAGD 748
Query: 365 IEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
I A + E++ +G P +S++AAG ++ ++++A +E +A
Sbjct: 749 IRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIA 796
>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
Length = 899
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/405 (19%), Positives = 166/405 (40%), Gaps = 48/405 (11%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLD-LI 114
+L+ ++ G + + +I +R AL+V M + + V ++ LI
Sbjct: 286 LLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLI 345
Query: 115 GKVRGLESAET----YFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFG 170
K R E+ ET + N L + Y ++++ Y + G V +L + + M+ G
Sbjct: 346 KKCRFKEAKETVSEMFANGLAPNVVI---YTSIIDGYCKVGKVGAALEVFRLMEHEGCRP 402
Query: 171 SALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVL 230
+A Y+ ++ + K ++ M+E+G+ P +Y I + E + +
Sbjct: 403 NAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLF 462
Query: 231 QEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYA 290
+ ME Q+ ++ D Y+ + + +G E+A +L + +++K + Y L+ ++
Sbjct: 463 EMME-QNGLTPDEQAYNVLTHALCKSGRAEEAYSFLVRKGVVLTK----VTYTSLVDGFS 517
Query: 291 SLGNKD------EMMKFWG-----------LQKIKCKKQLNRD----------------- 316
GN D E M G LQ + +K+LN
Sbjct: 518 KAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIV 577
Query: 317 -YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
Y ++ ++K G+ + A+ M E S + + + Y + G IE+A+ ++ E+
Sbjct: 578 AYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEM 637
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFW 420
+ G P ++++ G M++AF +K + E +W
Sbjct: 638 ERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYW 682
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 56/284 (19%), Positives = 111/284 (39%), Gaps = 33/284 (11%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +++ ++EG D + S+ +M G SA Y + Y GQ E+ ++ +M+
Sbjct: 579 YTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEME 638
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+GV PD +Y + IN G + + L+ M S W TY + +++ L
Sbjct: 639 RDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYW-TYWILLKHFLKMSLV 697
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHY---ASLGNKDEMMKFWGLQKIKCKKQLNRD 316
+ +HY + + N E+ W L + K LN
Sbjct: 698 D--------------------------AHYVDTSGMWNWIELDTVWQLLERMVKHGLNPT 731
Query: 317 YIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
+T ++ K LEEA + + + + +++ + KA + +
Sbjct: 732 AVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVT 791
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEEN 417
++++ G P S+ + G D+ + +KA + L + + N
Sbjct: 792 DMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDLLGMEDYN 835
>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
Length = 795
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 138/320 (43%), Gaps = 18/320 (5%)
Query: 30 AVKP--VARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKH 87
V+P V N ++ S + P + ++D +G + +I R R +
Sbjct: 214 GVQPALVTYNVVFHAYSKMSVPWKEVVALVDSMKEDGIERDRYTYNTLISCCRRRGLHRE 273
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLN 145
A QV + M G LD+ GK R E A + + + Y +L++
Sbjct: 274 AAQVFDEMKAAGFEPDKVTFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLIS 333
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
YV++GL++E+L L Q+M+ G + Y ++ G+ + +M NG P
Sbjct: 334 AYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSP 393
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL-KEKAII 264
+ +Y I +G R + + M V ++ S ++ D T++T+ + + GL E + +
Sbjct: 394 NLCTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVP-DVVTWNTLLSVFGQNGLDSEVSGV 452
Query: 265 Y--LKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD---YIT 319
+ +KK I + Y LIS Y+ G D+ M+ + K + + D Y
Sbjct: 453 FKEMKKAGYIPERDT----YVSLISSYSRCGLFDQAMEIY---KRMIEAGIYPDISTYNA 505
Query: 320 MLGSLVKIGELEEAEKMLEE 339
+L +L + G E+AEK+ E
Sbjct: 506 VLSALARGGRWEQAEKLFAE 525
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 133/294 (45%), Gaps = 10/294 (3%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD-M 198
Y AL++ + R G +++++ Q+M + G + + YN + Y+ K L+D M
Sbjct: 187 YTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKMSVPWKEVVALVDSM 246
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
KE+G+ D ++Y I+ R V EM++ + D T++++ + Y A
Sbjct: 247 KEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKA-AGFEPDKVTFNSLLDVYGKARK 305
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
E+AI LK+ E+ + + YN LIS Y G +E ++ + + K Y
Sbjct: 306 HEEAIGVLKRMEN-AGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYT 364
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
T++ L ++G+++ A E + + N ++ + +G + AV ++
Sbjct: 365 TLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSA 424
Query: 379 GKTPTPNSWSIIAAGYADK---NNMEKAFECMKEALAVHEENKFWRPKPSLVSS 429
G P +W+ + + + + + F+ MK+A + E + + SL+SS
Sbjct: 425 GYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYV----SLISS 474
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 3/150 (2%)
Query: 116 KVRGLESAETYFNSLNDED-KVD-KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
KV L E F L +D + A+++ Y + +V + ++ M E SA
Sbjct: 582 KVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLSLMMENSINHSAA 641
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
YN +M +Y+ G EK +L ++K +G+ PD +SY I +YG + ++ + EM
Sbjct: 642 TYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEM 701
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKAI 263
+ S + D TY+ Y+ + E+AI
Sbjct: 702 KC-SGVKPDIVTYNIFIKSYVANIMFEEAI 730
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 93/428 (21%), Positives = 171/428 (39%), Gaps = 41/428 (9%)
Query: 68 SELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLD-------------LI 114
S ++ R + S K+F L + M G+A +++ + ++ ++
Sbjct: 64 SLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVL 123
Query: 115 GKVR--GLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
GKV G E T FN+L +N E V E++ L+ +M E G +
Sbjct: 124 GKVMKLGYEPDTTTFNTL-------------INGLCLESKVSEAVVLVARMVENGCQPNV 170
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQE 232
+ YN I+ +G D+L M E V D F+Y I+S + + ++ +E
Sbjct: 171 VTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKE 230
Query: 233 MESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYA 290
ME++ I TY+++ AG + LK D+ S+ + + +N LI +
Sbjct: 231 METKG-IKSSLVTYNSLVGGLCKAGKWNDGVQLLK---DMTSRKIIPNVITFNVLIDVFV 286
Query: 291 SLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFR 350
G E + + K Y +++ L EA ML+ + D
Sbjct: 287 KEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIV 346
Query: 351 VPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEA 410
++ GY + +++ + ++I K+G ++SI+ G+ +E A E +E
Sbjct: 347 TFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEM 406
Query: 411 LAVHEENKFWRPKPSLVSSILDWLGDNRDVEE-VEAFVSSLKIKVQ-KRNMYHALTEAHI 468
+++ P +LD L DN +E+ +E F K K+ MY + E
Sbjct: 407 VSLG-----VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMC 461
Query: 469 RSGQEVDG 476
+ G+ D
Sbjct: 462 KGGKVEDA 469
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 154/360 (42%), Gaps = 23/360 (6%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +++ R+G +D ++SL ++M+ G S + YN ++ G+ +L DM
Sbjct: 208 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMT 267
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ P+ ++ + I+ + +L + +EM ++ IS + TY+++ + Y +
Sbjct: 268 SRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKG-ISPNTITYNSLMDGYCMQNRL 326
Query: 260 EKAIIYLKKCEDIVSK---SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
+A L D++ + S D + + LI Y + DE MK + +KI K+ L +
Sbjct: 327 SEANNML----DLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLF--RKIS-KRGLVAN 379
Query: 317 YIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
+T ++ + G+LE AE++ +E D I+L G G +EKA + +
Sbjct: 380 TVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFE 439
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDW 433
++ K ++II G +E A+ L K +P + ++
Sbjct: 440 DLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWN-----LFCSLPCKGVKPNVMTYTVMISG 494
Query: 434 LGDNRDVEEVEAFVSSLKIKVQKRN--MYHALTEAHIRSGQEVDG--LLESMKADDIDED 489
L + E + ++ + N Y+ L AH+R G L+E MK+ D
Sbjct: 495 LCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 554
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 56/299 (18%), Positives = 129/299 (43%), Gaps = 42/299 (14%)
Query: 146 CY---VREGLVD----ESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
CY +R G+VD +++ L Q+M S ++++ +T Q + D M
Sbjct: 32 CYGERLRSGIVDIKEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKM 91
Query: 199 KENGVPPDNFSYRICINSY-------------------GARSELSSMENVLQEMESQSHI 239
+ NG+ + ++ I IN + G + ++ ++ + +S +
Sbjct: 92 ELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKV 151
Query: 240 S---------MDWG------TYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNH 284
S ++ G TY+++ N +G A+ L+K ++ K+ D Y+
Sbjct: 152 SEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKA-DVFTYST 210
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSC 344
+I G D + + + K K Y +++G L K G+ + ++L++
Sbjct: 211 IIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRK 270
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
+ N+++ + ++G +++A+ + KE++ KG +P +++ + GY +N + +A
Sbjct: 271 IIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEA 329
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 147/344 (42%), Gaps = 30/344 (8%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I + K A + M +G++ +V ++ + V L+ A FN + E+
Sbjct: 203 IIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILEN 262
Query: 135 KVDKLY--GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+Y L++ + ++G + E ++ M + G + + Y +M Y + K
Sbjct: 263 IKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAK 322
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
+L M + GV PD SY I I+ + ++ N+ +EM + HI D TY++
Sbjct: 323 SILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHK-HIIPDVVTYNS---- 377
Query: 253 YIIAGL-KEKAIIYLKKC----------EDIVSKSK--DALGYNHLISHYASLGNKDEMM 299
+I GL K I Y K DI++ S DAL NH + +L K +
Sbjct: 378 -LIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTK---L 433
Query: 300 KFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGY 359
K G++ Y ++ L K G LE+A + E+ + Y +++ G+
Sbjct: 434 KDQGIRPNM------YTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGF 487
Query: 360 SQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
KG+ ++A A+L ++ P ++ II DK+ +KA
Sbjct: 488 CNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKA 531
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 142/335 (42%), Gaps = 29/335 (8%)
Query: 98 QGLAFSVHDHAV----QLDLIGK---VRGLESAETYFNSLNDEDKVDK--------LYGA 142
Q L F HD+ V QLD +G + GL +L+ +VD +Y
Sbjct: 145 QALLF--HDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYST 202
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
+++ ++ V+++ L +M G + + Y+ ++ + GQ + D+ M
Sbjct: 203 IIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILEN 262
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL--KE 260
+ PD +++ I ++ + ++ + V M Q I + TY ++ + Y + K
Sbjct: 263 IKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQG-IKPNVVTYCSLMDGYCLVKEVNKA 321
Query: 261 KAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT- 319
K+I+Y + + D YN LI + + DE M + K K + D +T
Sbjct: 322 KSILYTMSQRGV---NPDIQSYNILIDGFCKIKKVDEAMNLF---KEMHHKHIIPDVVTY 375
Query: 320 --MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
++ L K+G++ A K+++E D + IL + ++KA A+L ++
Sbjct: 376 NSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKD 435
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
+G P +++I+ G +E A ++ L
Sbjct: 436 QGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLV 470
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 79/395 (20%), Positives = 153/395 (38%), Gaps = 32/395 (8%)
Query: 70 LELQRVIRQLRSRKRFKHALQVSEWMSGQGL--AFSVHDHAVQLDLIGKVRGLESAETYF 127
+E +++ L K + L +S+ M +G+ H QL G F
Sbjct: 77 IEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQHPHQL------MGYHPNTITF 130
Query: 128 NSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQ 187
+L + G L +G + ++L + MG + Y ++ G+
Sbjct: 131 TTL--------IKGLCL-----KGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGE 177
Query: 188 HEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYS 247
D+L + N V P+ Y I+ ++ ++ EM S+ IS + TYS
Sbjct: 178 TRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKG-ISPNVVTYS 236
Query: 248 TVANYYIIAGLKEKAIIYLKK--CEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQ 305
+ + + G + AI K E+I D +N L+ + G E + +
Sbjct: 237 ALISGFFTVGQLKDAIDLFNKMILENI---KPDVYTFNILVDGFCKDGKMKEGKTVFAMM 293
Query: 306 KIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMI 365
+ K Y +++ + E+ +A+ +L D + NI++ G+ + +
Sbjct: 294 MKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKV 353
Query: 366 EKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPS 425
++A + KE+ K P +++ + G + A + + E ++ P
Sbjct: 354 DEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEM-----HDRGVPPDII 408
Query: 426 LVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNMY 460
SSILD L N V++ A ++ LK + + NMY
Sbjct: 409 TYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMY 443
>gi|168049701|ref|XP_001777300.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671276|gb|EDQ57830.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 291
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 132/308 (42%), Gaps = 49/308 (15%)
Query: 105 HDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDK-LYGALLNCYVREGLVDESLSLMQKM 163
H + +D +G L+ A+ F+ ++D K D LY +LL+ Y + G V+ + L M
Sbjct: 12 HLYTTIIDTLGSSGCLDLAKKIFSDMDDSVKKDTVLYNSLLHAYCKSGQVETANELFNSM 71
Query: 164 KEMGSFGSALNYNGIMCLYTNTGQH-EKIPDVLLDMKENGVPPDNFSYRICINSYGARSE 222
K+ YN IM +Y T K+ + +M G+ PD SY I + + +
Sbjct: 72 KQKDCRPDLSTYNTIMNMYVKTDVGLTKVLSLFKEMCLQGIQPDVVSYDILLAACAPKQH 131
Query: 223 LSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGY 282
+ + + M+ + I TY+++ Y AG+
Sbjct: 132 VKEAQRIFDTMKKRRGIKPTVVTYTSLITVYANAGI------------------------ 167
Query: 283 NHLISHYASLGNKDEMMKFWG-LQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWE 341
Y+S +++ +G + KC+ + + + +++ S K G +EEA+ + E +
Sbjct: 168 ------YSS---PNQLCPLFGEMVAEKCQPNV-KTFTSLINSCRKGGHVEEAQTIFEAMK 217
Query: 342 LSCYCYDFRV-PNIILLG-----YSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYA 395
++ V PN++ Y+++G + A V ++V+ G PT S++++ + +
Sbjct: 218 ------EYGVKPNVVTYNALINVYTERGEQDGAQRVFLQMVQSGLQPTGVSFTVLMSSFK 271
Query: 396 DKNNMEKA 403
++A
Sbjct: 272 ATGAFKEA 279
>gi|359480144|ref|XP_002269420.2| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Vitis vinifera]
gi|297744374|emb|CBI37344.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 72/146 (49%), Gaps = 8/146 (5%)
Query: 113 LIGKVRGLESAETYFNSLNDEDKV--DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFG 170
++GK + E A F ++ DE V + Y ALL+ Y R GL D++ SL++KMK
Sbjct: 147 MLGKCKQPEKAHALFLAMIDEGCVVNHEAYTALLSAYSRSGLFDKAFSLLEKMKNTPDCQ 206
Query: 171 SALNYNGIM---CLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSME 227
++ ++ CL +K+P +L DM G+ P+ +Y I++YG + ME
Sbjct: 207 PDVHTYSVLIKSCL--QVVAFDKVPVLLSDMANQGIKPNTVTYNTLIDAYGKAKRFAEME 264
Query: 228 NVLQEMESQSHISMD-WGTYSTVANY 252
+ L EM + D W ST+ +
Sbjct: 265 STLLEMLREGKCEPDVWTMNSTLRAF 290
Score = 38.5 bits (88), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 65/155 (41%), Gaps = 4/155 (2%)
Query: 91 VSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYG--ALLNCYV 148
V E+M ++++ + V +D G+ L+ E F + E +L+ Y
Sbjct: 337 VMEYMQKYHFSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 396
Query: 149 REGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNF 208
R G ++ +++ ++ + +N ++ Y G ++ VL MK+ G PD
Sbjct: 397 RAGKAEKIGGVLRFIENSDVMLDIVFFNCLVDAYGRLGCFAEMKGVLEMMKKKGCKPDKI 456
Query: 209 SYRICINSY--GARSELSSMENVLQEMESQSHISM 241
+YR I +Y G + + L M ++ + M
Sbjct: 457 TYRTMIKAYKIGGMTSCAKELQGLMRMPDETRLEM 491
>gi|356574297|ref|XP_003555285.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 794
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 163/381 (42%), Gaps = 35/381 (9%)
Query: 112 DLIGKVRGL------ESAETYFNSLNDE-DKVDKLYGALLNCYV----REGLVDESLSLM 160
D++G ++GL + A + F+ + D+V L G+++ V + G V + SL+
Sbjct: 108 DILGIIKGLGFNNKFDLALSLFDFIRTRNDRVSLLNGSVIAVIVSILGKTGRVSRAASLL 167
Query: 161 QKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGAR 220
++ G Y ++ Y N ++ V MKE G P +Y +N YG
Sbjct: 168 HNLEADGFEVDVYGYTSLITAYANNKKYRDALKVFGKMKEVGCEPTLITYNAILNVYGKM 227
Query: 221 S-ELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDA 279
+ + ++Q+M+ ++ D TY+T+ + L E+A+ ++ + + DA
Sbjct: 228 GMPWAKIIALVQDMKCHG-LAPDLCTYNTLISCCRAGSLYEEALDLFEEIK-VAGFRPDA 285
Query: 280 LGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEA----EK 335
+ YN L+ Y E M+ + + Y +++ + V+ G LE+A K
Sbjct: 286 VTYNALLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRK 345
Query: 336 MLEEW-ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGY 394
M+++ + Y Y +L G+ G E A V +E+ K G P +++ + Y
Sbjct: 346 MVDKGIKPDVYTY-----TTLLSGFVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMY 400
Query: 395 ADKNNMEKAFECMKEALAVHEENKFWRPKPSLVS--SILDWLGDNRDVEEVEAFVSSLKI 452
D+ E E + V +E K + P +V+ ++L G N EV +K
Sbjct: 401 GDRGKFE-------EMVKVFKEIKVCKCSPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKR 453
Query: 453 K--VQKRNMYHALTEAHIRSG 471
+R+ ++ L A+ R G
Sbjct: 454 SRFAPERDTFNTLISAYGRCG 474
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 140/307 (45%), Gaps = 12/307 (3%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I R+ ++ AL + E + G + LD+ GK R + A +
Sbjct: 256 LISCCRAGSLYEEALDLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKEAMEVLKQMESNS 315
Query: 135 KVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+ Y +L++ YVR GL++++L L +KM + G Y ++ + N G+ E
Sbjct: 316 FRPSVVTYNSLVSAYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTLLSGFVNAGKEELAM 375
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
+V +M++ G P+ ++ I YG R + M V +E++ S D T++T+
Sbjct: 376 EVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIKV-CKCSPDIVTWNTLLAV 434
Query: 253 YIIAGL-KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKK 311
+ G+ E + ++ + + +D +N LIS Y G+ D+ M + K +
Sbjct: 435 FGQNGMDSEVSGVFEEMKRSRFAPERDT--FNTLISAYGRCGSFDQAMAAY---KRMLEA 489
Query: 312 QLNRD---YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKA 368
++ D Y +L +L + G E++EK+L E + + + +L Y+ +E+
Sbjct: 490 GVSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLLHAYANGREVERM 549
Query: 369 DAVLKEI 375
+A+ +EI
Sbjct: 550 NALAEEI 556
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/324 (19%), Positives = 138/324 (42%), Gaps = 33/324 (10%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ L++ Y R G D++++ ++M E G YN ++ G E+ VL +MK
Sbjct: 463 FNTLISAYGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAVLATLARGGLWEQSEKVLAEMK 522
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ G P+ +Y +++Y E+ M + +E+ S GT T A +
Sbjct: 523 DGGCKPNEVTYSSLLHAYANGREVERMNALAEEIYS--------GTIKTHA-------VL 567
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKI--KCKKQLNRDY 317
K ++ + D++ +++ A + + M+ +G +K+ K + LN Y
Sbjct: 568 LKTLVLVNSKVDLLVETERAFLEFRKRGISPDVTTSNAMLSIYGRKKMVPKANEILNFMY 627
Query: 318 -------ITMLGSLV----KIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIE 366
+T SL+ + ++E++ E D NI++ Y + M++
Sbjct: 628 ESGLTLSLTSYNSLMYMYSRTENFHKSEQIFREILDKGIEPDVISYNIVIYAYCRNDMMD 687
Query: 367 KADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSL 426
+A +++E+ P +++ A YA + +A + ++ + + +P +
Sbjct: 688 EAKRIIEEMKVPAPVPDVVTYNTFIAAYAADSMFVEAIDVIRYMI-----KQGCKPNHNT 742
Query: 427 VSSILDWLGDNRDVEEVEAFVSSL 450
+SI+DW + +E +FV +L
Sbjct: 743 YNSIVDWYCKLKLRDEACSFVQNL 766
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/412 (19%), Positives = 174/412 (42%), Gaps = 12/412 (2%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
VI L R ++ + M +G + + V ++ + +V ++ A+ N + +
Sbjct: 284 VIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPN 343
Query: 135 KVDKLYGALLNCYVREGLVDESLSLM-QKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPD 193
V + L+N YV+ G +DE+ + + KM + G +N ++ G D
Sbjct: 344 DVH--FTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVD 401
Query: 194 VLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYY 253
++ DM NG P+ +Y ++ + +++L VL EM ++ ++ Y+ +
Sbjct: 402 MVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKG-FELNIMGYNVLLRAL 460
Query: 254 IIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQL 313
G KA+ L + D K D +N LI + K++ + + +
Sbjct: 461 CKNGKVPKALDMLGEMSDKGCKP-DIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIAN 519
Query: 314 NRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
Y T++ + ++ G ++EA K++ + D N ++ + + G EKA +
Sbjct: 520 TVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFD 579
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDW 433
E+V+K P+ S +++ G + A E +++ + ++ P +S+++
Sbjct: 580 EMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMI-----HRGLAPDVVTYNSLING 634
Query: 434 LGDNRDVEEVEAFVSSLKIK-VQKRNM-YHALTEAHIRSGQEVDGLLESMKA 483
L ++ E + L+ + +Q + Y+ L H R+G D L ++
Sbjct: 635 LCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRG 686
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/332 (19%), Positives = 137/332 (41%), Gaps = 19/332 (5%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDK--LYGALLN 145
A V M +G+ +V+ V + + V +++A + + V +Y L++
Sbjct: 192 AANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIH 251
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGI---MCLYTNTGQHEKIPDVLLDMKENG 202
+ V+E+L L+++M MG +N + +C + K+ D +L G
Sbjct: 252 ALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRML---FRG 308
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
P++ +Y + +N ++ + +L ++ + + + ++ + N Y+ +G ++A
Sbjct: 309 FTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVH-----FTILINGYVKSGRLDEA 363
Query: 263 IIYLKKCEDIVSKSKDALGYNHLISHYAS---LGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
+L D +N LI +G+ +M+ + C L Y T
Sbjct: 364 NAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVN--DMSANGCTPNL-ITYTT 420
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
+L K +LEEA +L E + + N++L + G + KA +L E+ KG
Sbjct: 421 LLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKG 480
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
P +++ + G + E A ++ L
Sbjct: 481 CKPDIFTFNTLIFGLCKVDRKEDALALYRDML 512
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 106/244 (43%), Gaps = 4/244 (1%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
VL++ +G +++ + ++R L + AL + MS +G + + +
Sbjct: 437 VLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLC 496
Query: 116 KV-RGLESAETYFNSLNDEDKVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
KV R ++ Y + L D + + Y L++ ++R G + E+L L+ M G +
Sbjct: 497 KVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEI 556
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
YNG++ + G EK + +M + P N S + IN ++ + +L++M
Sbjct: 557 TYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDM 616
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLG 293
+ ++ D TY+++ N G +A K + DA+ YN LI + G
Sbjct: 617 IHRG-LAPDVVTYNSLINGLCKMGNIREAFNLFNKLQ-AEGIQPDAITYNTLICWHCRAG 674
Query: 294 NKDE 297
D+
Sbjct: 675 MFDD 678
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 131/315 (41%), Gaps = 23/315 (7%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
K Y +L+ V + ++ +M G + + +M + + +L D
Sbjct: 174 KSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRD 233
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
M ++G P++ Y+ I++ R ++ +L+EM + D T++ V I G
Sbjct: 234 MTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLP-DVDTFNDV-----IYG 287
Query: 258 LKEKAIIY--LKKCEDIVSK--SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQL 313
L I+ K + ++ + + + + Y L++ +G DE L K+ +
Sbjct: 288 LCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVL--LNKVPTPNDV 345
Query: 314 NRDYITMLGSLVKIGELEEAEKMLEEWELSCYCY-DFRVPNIILLGYSQKGMIEKADAVL 372
+ + ++ VK G L+EA L + + C D N ++ G +KG++ A ++
Sbjct: 346 H--FTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMV 403
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEA------LAVHEENKFWRP--KP 424
++ G TP +++ + G+ KN +E+A + E L + N R K
Sbjct: 404 NDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKN 463
Query: 425 SLVSSILDWLGDNRD 439
V LD LG+ D
Sbjct: 464 GKVPKALDMLGEMSD 478
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 64/344 (18%), Positives = 136/344 (39%), Gaps = 14/344 (4%)
Query: 58 DQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKV 117
D+ + G + +I L + A+ + MS G ++ + LD K
Sbjct: 369 DKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKK 428
Query: 118 RGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNY 175
LE A N ++ + + Y LL + G V ++L ++ +M + G +
Sbjct: 429 NQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTF 488
Query: 176 NGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMES 235
N ++ + E + DM +GV + +Y I+++ + ++ +M
Sbjct: 489 NTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLF 548
Query: 236 QSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC--EDIVSKSKDALGYNHLISHYASLG 293
+ +D TY+ + + G EKA+ + +D+V + + N LI+ +G
Sbjct: 549 RG-CPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSN---ISCNLLINGLCRVG 604
Query: 294 NKDEMMKFWGLQKIKCKKQLNRDYIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFR 350
++ L + + L D +T ++ L K+G + EA + + + D
Sbjct: 605 KVCNALE---LLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAI 661
Query: 351 VPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGY 394
N ++ + + GM + A +L V+ P +W I+ + +
Sbjct: 662 TYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNF 705
>gi|449525162|ref|XP_004169587.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g73710-like [Cucumis sativus]
Length = 1026
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 136/301 (45%), Gaps = 12/301 (3%)
Query: 111 LDLIGKVRGLESAETYFNS-LNDEDKVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGS 168
+DL GK L+ A F L +D + + ++ G + E+ +L+ KM+E G
Sbjct: 328 IDLYGKAGRLKDAANVFGEMLTTGISMDTITFNTMIYTCGSHGHLAEAETLLLKMEERGL 387
Query: 169 FGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMEN 228
YN + LY N G + ++E G+ PD ++R ++ R+ + +EN
Sbjct: 388 SPDTKTYNIFLSLYANDGNIDGALKCYRRIREVGLFPDVVTHRALLHVLSERNMVEDVEN 447
Query: 229 VLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKK--CEDIVSKSKDALGYNHLI 286
V+ EME +SHI +D + V YI GL ++A I L+K + +S A +I
Sbjct: 448 VIAEME-KSHILLDEHSLPRVIKMYINEGLLDRAKILLEKYRLDTELSPRISA----AII 502
Query: 287 SHYASLG--NKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSC 344
YA G + E + W + + KK +Y M+ + K E+A + + +
Sbjct: 503 DAYAEKGLWFEAESIFLWK-RDLAGKKXDVMEYNVMIKAYGKAELYEKAFLLFKSMKNRG 561
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
D N ++ +S ++++A +L E+ + G PT ++S + A YA M A
Sbjct: 562 TWPDECTYNSLIQMFSGGDLVDEARRLLTEMQRMGFKPTCQTFSAVIASYARLGLMSDAV 621
Query: 405 E 405
E
Sbjct: 622 E 622
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 148/357 (41%), Gaps = 17/357 (4%)
Query: 104 VHDHAVQLDLIGKVRGLESAETYFNSLNDEDK--VDKLYGALLNCYVREGLVDESLSLMQ 161
V ++ V + GK E A F S+ + + Y +L+ + LVDE+ L+
Sbjct: 531 VMEYNVMIKAYGKAELYEKAFLLFKSMKNRGTWPDECTYNSLIQMFSGGDLVDEARRLLT 590
Query: 162 KMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARS 221
+M+ MG + ++ ++ Y G +V M V P+ Y + +N +
Sbjct: 591 EMQRMGFKPTCQTFSAVIASYARLGLMSDAVEVYDMMVHADVEPNEILYGVLVNGFAEIG 650
Query: 222 ELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY--LKKCEDIVSKSKDA 279
+ + ME S + + + L++ IY +K ED D
Sbjct: 651 QAEEALKYFRLMEKSGIAENQIVLTSLIKAFSKVGSLEDARRIYNRMKNMED----GADT 706
Query: 280 LGYNHLISHYASLGNKDEMMK-FWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLE 338
+ N +I+ YA LG E + F L++ ++ + TM+ IG L+EA ++ E
Sbjct: 707 IASNSMINLYADLGMVSEAKQVFEDLRERGYADGVS--FATMIYLYKNIGMLDEAIEVAE 764
Query: 339 EWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKN 398
E + S D ++ Y+ G + + +L E+V + P +++++
Sbjct: 765 EMKESGLLRDATSFRKVIECYAINGQVRECGELLHEMVTRKLLPDNRTFNVLFTILKKGV 824
Query: 399 NMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQ 455
+A ++ A HEE + R ++++++ LG + +E+ + LK +VQ
Sbjct: 825 IPLEAVSQLESAF--HEEKTYAR--QAIIAAVFSGLGLH--ASALESCDTFLKAEVQ 875
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 159/387 (41%), Gaps = 71/387 (18%)
Query: 73 QRVIRQLRSRKRFKHALQVSEWMSGQ-GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLN 131
Q VI L+ + R++ +QV +W Q +V + + L +G+ + + +N +
Sbjct: 131 QTVI--LKEQSRWERVIQVFQWFKSQKDYVPNVIHYNIVLRTLGQAQKWDELRLCWNEMA 188
Query: 132 DEDKV--DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHE 189
+ V + YG L++ Y + GLV E+L ++ M G F + N ++ + + G+ +
Sbjct: 189 ENGVVPTNNTYGMLIDVYGKVGLVKEALLWIKHMTVRGIFPDEVTMNTVVRVLKDAGEFD 248
Query: 190 -----------------------KIPDVLLDMKENGVPPDNF------------------ 208
++ D ++ + P +F
Sbjct: 249 SADKFYKDWCRGLVELNDFDLNSRVEDFGVNSAVEPITPKHFCXTELFRIGTRIPNRKVS 308
Query: 209 --------------SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYI 254
+Y I+ YG L NV EM + + ISMD T++T+
Sbjct: 309 PEVDNCVRKPRLTSTYNTLIDLYGKAGRLKDAANVFGEMLT-TGISMDTITFNTMIYTCG 367
Query: 255 IAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN 314
G +A L K E+ S D YN +S YA+ GN D +K + ++I+ + L
Sbjct: 368 SHGHLAEAETLLLKMEE-RGLSPDTKTYNIFLSLYANDGNIDGALKCY--RRIR-EVGLF 423
Query: 315 RDYIT---MLGSLVKIGELEEAEKMLEEWELSCYCYD-FRVPNIILLGYSQKGMIEKADA 370
D +T +L L + +E+ E ++ E E S D +P +I + Y +G++++A
Sbjct: 424 PDVVTHRALLHVLSERNMVEDVENVIAEMEKSHILLDEHSLPRVIKM-YINEGLLDRA-K 481
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADK 397
+L E + +P + I YA+K
Sbjct: 482 ILLEKYRLDTELSPRISAAIIDAYAEK 508
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 100/229 (43%), Gaps = 9/229 (3%)
Query: 111 LDLIGKVRGLESAETYFNSLNDEDKVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGSF 169
++L + + A+ F L + D + + ++ Y G++DE++ + ++MKE G
Sbjct: 713 INLYADLGMVSEAKQVFEDLRERGYADGVSFATMIYLYKNIGMLDEAIEVAEEMKESGLL 772
Query: 170 GSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENV 229
A ++ ++ Y GQ + ++L +M + PDN ++ + + + +E V
Sbjct: 773 RDATSFRKVIECYAINGQVRECGELLHEMVTRKLLPDNRTFNVLFTIL--KKGVIPLEAV 830
Query: 230 LQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSK--DALGYNHLIS 287
Q +ES H + + +A + GL A L+ C+ + D+ YN I
Sbjct: 831 SQ-LESAFHEEKTYARQAIIAAVFSGLGLHASA---LESCDTFLKAEVQLDSFAYNVAIY 886
Query: 288 HYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKM 336
Y + D+ + + K + K YI ++G K G +E +++
Sbjct: 887 AYGAAEKIDKALNIFMKMKDQNLKPDLVTYINLVGCYGKAGMIEGVKQI 935
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 114/286 (39%), Gaps = 44/286 (15%)
Query: 132 DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
D ++ +Y + + Y R+G V E++ + ++M S +YN IM + G +
Sbjct: 71 DNSLLEGVYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQA 130
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
V L MK G+ PD ++ I I S+ + +L M SQ
Sbjct: 131 HKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQ--------------- 175
Query: 252 YYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKK 311
G + A++Y ++ Y L + LG + F L I CKK
Sbjct: 176 -----GCELNAVVYCTVISGFYEENYQVEAY-ELFNKMLRLGIFPHIATFNKLMHILCKK 229
Query: 312 QLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADA- 370
G L+E EK+L + + C + NI + G +KG++E A++
Sbjct: 230 ----------------GHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSK 273
Query: 371 ------VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEA 410
L ++V KG P +++ I GY+ ++ A +K+A
Sbjct: 274 VVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDA 319
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/406 (17%), Positives = 159/406 (39%), Gaps = 45/406 (11%)
Query: 85 FKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE--DKVDKLYGA 142
F A +V M +G+A V +++ + + +A N++ + + +Y
Sbjct: 127 FNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCT 186
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
+++ + E E+ L KM +G F +N +M + G ++ +L + +NG
Sbjct: 187 VISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNG 246
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
V P+ F++ I I + L + + E E+ H ++ G
Sbjct: 247 VCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGL----------------- 289
Query: 263 IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLG 322
D YN +I Y+ +G + + K K Y +++
Sbjct: 290 -------------EPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLII 336
Query: 323 SLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTP 382
+ + G+++ A + EE + N ++ G SQ+G++ KA ++ ++ K+G +P
Sbjct: 337 GVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSP 396
Query: 383 TPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEE 442
+++++ G + A + A+A K + P ++++D ++
Sbjct: 397 DIWTYNLVINGLCKMGCVSDANNLLNAAIA-----KGYLPDIFTFNTLIDGYCKRLKMDN 451
Query: 443 VEAFVSSLKIKVQKRNMYHALTEAHIRSGQEVDGLLESMKADDIDE 488
+ S+ H +T I ++GL ++ K +D+ E
Sbjct: 452 AIGILDSM--------WSHGVTPDVITYNSILNGLCKAAKPEDVME 489
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 132/326 (40%), Gaps = 40/326 (12%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
LY L+ ++GLV ++L LM M + G YN ++ G ++L
Sbjct: 365 LYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAA 424
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
G PD F++ I+ Y R ++ + +L M S ++ D TY+++ N GL
Sbjct: 425 IAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHG-VTPDVITYNSILN-----GL 478
Query: 259 KEKAIIYLKKCEDIVSKSK---------DALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
+ A K ED++ K + + YN LI E + L++I+
Sbjct: 479 CKAA-----KPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDL--LEEIR- 530
Query: 310 KKQLNRDYI-------TMLGSLVKIGELEEAEKMLEEWELSC-YCYDFRVPNIILLGYSQ 361
NR I T++ G+L+EA ++ E C+ NI++ +S+
Sbjct: 531 ----NRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSE 586
Query: 362 KGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWR 421
K ++ A + E+ KG P ++ ++ G+ N+ ++ + + + + +
Sbjct: 587 KLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIG-----FV 641
Query: 422 PKPSLVSSILDWLGDNRDVEEVEAFV 447
P + +++ L V E V
Sbjct: 642 PSLTTFGRVINCLCVQHRVHEAVGIV 667
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 153/402 (38%), Gaps = 75/402 (18%)
Query: 75 VIRQLRSRKRFKH--ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLND 132
V+R L + + +H L + E + +GL+ + L + R +A F+ + +
Sbjct: 16 VLRGLHASAKLRHLGPLLLDE-IRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAE 74
Query: 133 EDKVD-KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
V+ Y L++ + L+DE++ L+ MK G L +N ++ G+
Sbjct: 75 LGAVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHA 134
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
V M + PPD +Y ++ L VLQEM S H+ D T + V
Sbjct: 135 LGVYRQMND-AHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVP-DNTTLTVVVQ 192
Query: 252 YYIIA----------------GLKEKAIIY------LKKCE------------------- 270
+ G+ AI Y L KCE
Sbjct: 193 SLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFT 252
Query: 271 -DIVSKS-------------------------KDALGYNHLISHYASLGNKDEMMKFWG- 303
DIV+ S A+ YN LI Y G+ DE ++ G
Sbjct: 253 PDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGK 312
Query: 304 LQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKG 363
+ C + Y T++ + K+G L++A ++ ++ + D ++ G +G
Sbjct: 313 MVDDNCAPDVIT-YTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEG 371
Query: 364 MIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
+E A +L+EI ++G PT +++ + GY N + KA E
Sbjct: 372 RMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEE 413
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/398 (19%), Positives = 161/398 (40%), Gaps = 57/398 (14%)
Query: 49 PDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHA 108
PD + V+ Q + G ++ + + ++ ++ R +A+ S + G + D A
Sbjct: 182 PDNTTLTVVVQSLCLGDRVDDA--RELVEEMLHRGMAANAITYSALVDGLCKCERL-DEA 238
Query: 109 VQLDLIGKV--RGLESAETYFNSLND--------EDKVDKL-----------YGALLNCY 147
V L L+G+V RG ++++ D D VD Y +L+ Y
Sbjct: 239 VAL-LLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIGGY 297
Query: 148 VREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDN 207
R G +DE++ L+ KM + + Y +M + G+ + ++ M N + PD
Sbjct: 298 CRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDV 357
Query: 208 FSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLK 267
++ ++ + +L+E+ + + TY+ V + Y + ++
Sbjct: 358 VTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIY-TYNCVVDGYCKSN-------QVR 409
Query: 268 KCEDIVSKSK------DALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD----- 316
K E++V+ + + + YN L++ G D+ +++ QLN +
Sbjct: 410 KAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYL--------DQLNSEGGPCP 461
Query: 317 -----YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAV 371
Y +L +L + G ++A + EE Y ++ + ++A +
Sbjct: 462 TSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHEL 521
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
L+E++K G TP P + + + Y ++KA E E
Sbjct: 522 LEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASE 559
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/314 (18%), Positives = 135/314 (42%), Gaps = 27/314 (8%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG---KVRGLESAETYFNSLN 131
VI L R + A+ + E MS A + + LIG + ++ A +
Sbjct: 261 VIDGLCKAGRLRDAVDIFEEMSCAPTAITYNS------LIGGYCRAGDMDEAIRLLGKMV 314
Query: 132 DEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHE 189
D++ + Y L++ + + G +D++ L Q+M + + ++ G+ E
Sbjct: 315 DDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRME 374
Query: 190 KIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTV 249
++L ++ G PP ++Y ++ Y +++ E ++ + S+ + + TY+ +
Sbjct: 375 DALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVP-NTVTYNIL 433
Query: 250 ANYYIIAGLKEKAIIYLKKCEDIVSKSKDALG-YNHLISHYASLGNKDEMMKFWGLQKIK 308
AG ++A+ YL + ++ Y ++ G D+ ++F+
Sbjct: 434 VAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFY------ 487
Query: 309 CKKQLNRDYI-------TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQ 361
++ + R Y+ T++ +L K + ++A ++LEE + + ++ Y +
Sbjct: 488 -EEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCR 546
Query: 362 KGMIEKADAVLKEI 375
GMI+KAD + E+
Sbjct: 547 AGMIQKADELASEL 560
>gi|414591144|tpg|DAA41715.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea mays]
Length = 521
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/354 (21%), Positives = 141/354 (39%), Gaps = 62/354 (17%)
Query: 140 YGALLNCYVRE---GLVDESLSLMQ--------------------------------KMK 164
Y +LL+CYVR+ G V E L +M+ +MK
Sbjct: 169 YNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMK 228
Query: 165 EMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELS 224
G Y ++ Y G + VL + NGV P+ +Y + I + ++
Sbjct: 229 ANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQME 288
Query: 225 SMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNH 284
+ E +L +M+ Q + ++ ++T+ + Y G+ + A + +K + + + YN
Sbjct: 289 AAEMLLADMQGQG-VGLNQIIFNTMIDGYCRKGMVDDA-LKIKAAMEKIGVELNIYTYNT 346
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCK-------KQLNRD------------YITMLGSLV 325
L +G + + L I CK ++L R+ Y M+
Sbjct: 347 LACGLCRMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYA 406
Query: 326 KIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPN 385
K G + EAE+ +E E + D ++ G+ G ++ A + +E+ ++G P
Sbjct: 407 KKGRIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVV 466
Query: 386 SWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWL-GDNR 438
+++ + +G A + E AF+ + L P SL S+++ L DNR
Sbjct: 467 AYTALISGLAKEGRSEAAFQLYDDMLKAG-----LIPDDSLYSALVGSLHTDNR 515
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 128/284 (45%), Gaps = 29/284 (10%)
Query: 149 REGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNF 208
+ G VD++ L+ M G +AL YN ++ Y ++ ++L M+ G+
Sbjct: 143 KSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVG 202
Query: 209 SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKK 268
+Y I ++S ++S +E + EM++ + + D Y+ V N Y AG +A L +
Sbjct: 203 TYTILVDSLSTARDISKVEALFNEMKANNVVG-DVYLYTAVINAYCRAGNMRRAAKVLDE 261
Query: 269 CEDIVSKSKDALGYNHLISHYASLGNKD--EMM------KFWGLQKI--------KCKKQ 312
C + + Y LI + +G + EM+ + GL +I C+K
Sbjct: 262 CVGNGVEPNERT-YGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKG 320
Query: 313 LNRDYITMLGSLVKIG-ELEEAEKMLEEWELSC-YCYDFRVPNIILLG-----YSQKGMI 365
+ D + + ++ KIG EL + L+C C VPN + + + G +
Sbjct: 321 MVDDALKIKAAMEKIGVEL----NIYTYNTLACGLCRMGVVPNYVTYTTLISIHCKDGDM 376
Query: 366 EKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
+A + +E+ +KG TP+ ++S++ GYA K + +A KE
Sbjct: 377 VEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKE 420
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/241 (19%), Positives = 101/241 (41%), Gaps = 27/241 (11%)
Query: 85 FKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV--DKLYGA 142
+ A +V + G G+ + + V + K+ +E+AE + + ++
Sbjct: 252 MRRAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNT 311
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMC-------------------LYT 183
+++ Y R+G+VD++L + M+++G + YN + C ++
Sbjct: 312 MIDGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCRMGVVPNYVTYTTLISIHC 371
Query: 184 NTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDW 243
G + + +M E G P +Y + I+ Y + + E +EME + + D
Sbjct: 372 KDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVP-DV 430
Query: 244 GTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKD--ALGYNHLISHYASLGNKDEMMKF 301
TY+++ + + + G K + LK E++ + + + Y LIS A G + +
Sbjct: 431 YTYASLVHGHCVNG---KVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQL 487
Query: 302 W 302
+
Sbjct: 488 Y 488
>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
Length = 628
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 115/269 (42%), Gaps = 9/269 (3%)
Query: 149 REGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNF 208
R VDE L MQ MK G +N + +G+ ++LL M E+G P+
Sbjct: 272 RLDTVDEVLEHMQAMKA-GCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLL 330
Query: 209 SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA--IIYL 266
SY I+ + + ++M D ++T+ + + AG +A ++
Sbjct: 331 SYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIE 390
Query: 267 KKCEDIVSKSKDALGYNHLISHYASLGN-KDEMMKFWGLQKIKCKKQLNRDYITMLGSLV 325
K ++I D + YN LI + G+ K + +Q + CK + Y ++
Sbjct: 391 MKAKNICVP--DVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNV-VTYAALINGYA 447
Query: 326 KIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPN 385
K G EEAE + +E D N +L +S+ GM+ KA+ V +++ K +P+
Sbjct: 448 KHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPD 507
Query: 386 --SWSIIAAGYADKNNMEKAFECMKEALA 412
++ I+ GY + E+ ++E A
Sbjct: 508 AITYRILIDGYCRAEDTEQGLTLLQEMTA 536
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 121/274 (44%), Gaps = 18/274 (6%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ++ + G +D+ L ++++M G + + I+ + + V M
Sbjct: 190 YNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGML 249
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMES-QSHISMDWGTYSTVANYYIIAG- 257
E G PD+ +Y I +++ + L +++ VL+ M++ ++ M+ T++ +G
Sbjct: 250 ERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGK 309
Query: 258 --LKEKAIIYLKKCEDIVSKS-KDALGYNHLISHYASLGNKDEMMKFWGLQK----IKCK 310
L + ++ + I S S + L YN +I GN D+ W L + C
Sbjct: 310 FPLAKNILLGM-----IESGSLPNLLSYNFVIDGLCKSGNVDDA---WKLSRKMLDSGCC 361
Query: 311 KQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCY-DFRVPNIILLGYSQKGMIEKAD 369
K + T++ K G L +A ++L E + C D N ++ G S+ G +++A
Sbjct: 362 KPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAK 421
Query: 370 AVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
+L+E+ G P +++ + GYA E+A
Sbjct: 422 LLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEA 455
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 3/112 (2%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVL--LD 197
Y AL+N Y + G+ +E+ SL +M G F + YN ++ ++ G K V L
Sbjct: 439 YAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLK 498
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTV 249
K + PD +YRI I+ Y + +LQEM ++ S D TY+ +
Sbjct: 499 NKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGW-SCDSYTYNVL 549
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 148/345 (42%), Gaps = 16/345 (4%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
++ L KHAL+V + M +G ++ + + + K+ ++ A N + + D
Sbjct: 307 LVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERD 366
Query: 135 KVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGI---MCLYTNTGQHE 189
Y +++ +E V+E+ L + G YN + +CL N H
Sbjct: 367 CSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRN---HT 423
Query: 190 KIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTV 249
++ +MK G PD F+Y + I+S R +L N+L+EME S + + TY+T+
Sbjct: 424 VAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEV-SGCARNVITYNTL 482
Query: 250 ANYYIIAGLKEKAIIYLKKCED---IVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQK 306
+ + K K I ++ D + S++++ YN LI +E +
Sbjct: 483 IDGFC----KNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMI 538
Query: 307 IKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIE 366
++ + Y ++L K G++++A +++ D ++ G + G +E
Sbjct: 539 MEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVE 598
Query: 367 KADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
A +L+ I KG TP++++ + + ++A +E +
Sbjct: 599 AATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMI 643
>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 126/282 (44%), Gaps = 16/282 (5%)
Query: 137 DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
D + ++N + G V E+ + + G +++ YN I+ + G +
Sbjct: 534 DHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYR 593
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
+M E+G+ PD +Y I+ +++ + +M+ + + +D YS + + +
Sbjct: 594 EMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKG-MKLDVVAYSALIDGFCKM 652
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKD-------EMMKFWGLQKIKC 309
E A + + DI + + + YN +IS + L N + EM+K K+ C
Sbjct: 653 HDMESASKFFTELLDI-GLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIK----NKVPC 707
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKAD 369
Q+ Y +++G L+K G+L A + E D + +++ G S G +E A
Sbjct: 708 DLQV---YTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENAS 764
Query: 370 AVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
+LKE+ TP+ ++I+ AG + N+++AF E L
Sbjct: 765 KILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEML 806
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 61/313 (19%), Positives = 135/313 (43%), Gaps = 24/313 (7%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+ R ++ + L+++M+E G S Y ++ G + + +M
Sbjct: 258 YSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMV 317
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G+P + R + Y +++ + E+ + + D +S + N G
Sbjct: 318 SVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEV-VEGGVVPDVVIFSVLINGCSKVGDM 376
Query: 260 EKA--------IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKK 311
EKA ++ ++ IV+ + +L+ H + G DE ++ G+ +
Sbjct: 377 EKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEH--AYGLFDEAVE-HGITNV---- 429
Query: 312 QLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAV 371
Y +L L ++G++ EA + E+ N ++LG+ +KG ++KA ++
Sbjct: 430 ---VTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSM 486
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSIL 431
LK I+++G P +++++ G+ K + E+AF ++ +A + P ++++
Sbjct: 487 LKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAAN-----IAPTDHTFNTVI 541
Query: 432 DWLGDNRDVEEVE 444
+ LG V E +
Sbjct: 542 NGLGKTGRVSETQ 554
>gi|356521277|ref|XP_003529283.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
mitochondrial-like [Glycine max]
Length = 379
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 130/315 (41%), Gaps = 14/315 (4%)
Query: 133 EDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
ED V +L GA +VR+ +++ K+ + ++ LY +G +
Sbjct: 60 EDTVRRLAGARRFRWVRD--------ILEHQKQYSDISNEGFSARLISLYGKSGMTKHAR 111
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
V +M + S + +Y + ++ + +++ +Q I D TY+T+
Sbjct: 112 KVFDEMPQRNCSRTVLSLNALLAAYLHSHKYDVVQELFRDLPTQLSIKPDLVTYNTIIKA 171
Query: 253 YIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQ 312
+ G + A+ L++ E+ S D++ +N L+ S G +E K W +
Sbjct: 172 FCEKGSFDSALSVLREIEE-KGLSPDSITFNTLLDGLYSKGRFEEGEKVWEQMSVNNVAP 230
Query: 313 LNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
R Y + L L ++ + EA ++ E E D N ++ G+ +G +++A
Sbjct: 231 GVRSYCSKLVGLAEVKKAGEAVELFREMEKVGVKPDLFCINAVIKGFVNEGNLDEAKKWF 290
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILD 432
EI K P N++SII +K + + A E KE N R +L+ ++D
Sbjct: 291 GEIAKSEYDPDKNTYSIIVPFLCEKGDFKTAIEMCKEIF-----NNRCRVDATLLQGVVD 345
Query: 433 WLGDNRDVEEVEAFV 447
L + E + V
Sbjct: 346 KLASEGMITEAKEIV 360
>gi|297834714|ref|XP_002885239.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
gi|297331079|gb|EFH61498.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
Length = 1429
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 175/386 (45%), Gaps = 32/386 (8%)
Query: 42 RISPLGDPDVSLTP---VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQ 98
R+ L D +SL P V D +++ + V++ + ++ ++ AL+V EW++ +
Sbjct: 126 RVKFLTDKILSLKPNQFVADILDARPVQMTPTDYCFVVKSV-GQESWQRALEVFEWLNLR 184
Query: 99 GLAFSVHDHAVQLDLIGKVRGL------ESAETYFNSLNDEDKVDKL--YGALLNCYVRE 150
H H+ ++ + G+ ES + + D++ Y A++ Y R
Sbjct: 185 ------HWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRS 238
Query: 151 GLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDV---LLDMKEN-GVPPD 206
G ++ L+ M++ G +++N ++ +G P++ LLDM N G+ PD
Sbjct: 239 GKFSKAQELLDAMRQRGCVPDLISFNTLINARLKSGGL--TPNLVVELLDMVRNSGLRPD 296
Query: 207 NFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYL 266
+Y +++ S L V ++ME+ D TY+ + + Y GL +A
Sbjct: 297 AITYNTLLSACSRDSNLEGAVKVFEDMEAH-RCQPDLWTYNAMISVYGRCGLAAEAERLF 355
Query: 267 KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFW-GLQKIKCKKQLNRDYITMLGSLV 325
+ E + S DA+ YN L+ +A N +++ + + +QK+ K Y T++
Sbjct: 356 IELE-LKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKD-EMTYNTIIHMYG 413
Query: 326 KIGELEEAEKMLEEWE-LSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTP 384
K G+L+ A ++ ++ + LS D +++ + +A A++ E++ G PT
Sbjct: 414 KQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRSVEAAALMSEMLDVGIKPTL 473
Query: 385 NSWSIIAAGYADKNNMEKA---FECM 407
++S + GYA E+A F CM
Sbjct: 474 QTYSALICGYAKAGKREEAEDTFSCM 499
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 123/304 (40%), Gaps = 49/304 (16%)
Query: 175 YNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEME 234
YN +M +Y+ +G+ K ++L M++ G PD S+ IN + L S
Sbjct: 228 YNAMMGVYSRSGKFSKAQELLDAMRQRGCVPDLISFNTLIN-----ARLKS--------- 273
Query: 235 SQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS---KDALGYNHLISHYAS 291
GL ++ L D+V S DA+ YN L+S +
Sbjct: 274 ---------------------GGLTPNLVVELL---DMVRNSGLRPDAITYNTLLSACSR 309
Query: 292 LGNKDEMMK-FWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFR 350
N + +K F ++ +C+ L Y M+ + G EAE++ E EL + D
Sbjct: 310 DSNLEGAVKVFEDMEAHRCQPDL-WTYNAMISVYGRCGLAAEAERLFIELELKGFSPDAV 368
Query: 351 VPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEA 410
N +L ++++ EK V +++ K G +++ I Y + ++ A + K+
Sbjct: 369 TYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDM 428
Query: 411 LAVHEENKFWRPKPSLVSSILDWLGD-NRDVEEVEAFVSSLKIKVQKR-NMYHALTEAHI 468
+ N P + ++D LG NR VE L + ++ Y AL +
Sbjct: 429 KGLSGRN----PDAITYTVLIDSLGKANRSVEAAALMSEMLDVGIKPTLQTYSALICGYA 484
Query: 469 RSGQ 472
++G+
Sbjct: 485 KAGK 488
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 85/194 (43%), Gaps = 1/194 (0%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y A+++ Y R GL E+ L +++ G A+ YN ++ + EK+ +V M+
Sbjct: 335 YNAMISVYGRCGLAAEAERLFIELELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQMQ 394
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ G D +Y I+ YG + +L + ++M+ S + D TY+ + + A
Sbjct: 395 KMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRS 454
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
+A + + D+ K Y+ LI YA G ++E + K N Y
Sbjct: 455 VEAAALMSEMLDVGIKPT-LQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSV 513
Query: 320 MLGSLVKIGELEEA 333
ML L++ E +A
Sbjct: 514 MLDVLLRGNETRKA 527
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 116/273 (42%), Gaps = 15/273 (5%)
Query: 140 YGALLNCYVREGLVDESL--SLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
+ L+N ++ G + +L L+ ++ G A+ YN ++ + E V D
Sbjct: 263 FNTLINARLKSGGLTPNLVVELLDMVRNSGLRPDAITYNTLLSACSRDSNLEGAVKVFED 322
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
M+ + PD ++Y I+ YG + E + E+E + S D TY N + A
Sbjct: 323 MEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFIELELKG-FSPDAVTY----NSLLYAF 377
Query: 258 LKEKAIIYLKKCEDIVSK---SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN 314
+E+ +K+ + K KD + YN +I Y G D ++ + + +K N
Sbjct: 378 ARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLY--KDMKGLSGRN 435
Query: 315 RDYIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAV 371
D IT ++ SL K EA ++ E + + ++ GY++ G E+A+
Sbjct: 436 PDAITYTVLIDSLGKANRSVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDT 495
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
+++ G P ++S++ N KA+
Sbjct: 496 FSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAW 528
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/277 (19%), Positives = 118/277 (42%), Gaps = 12/277 (4%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y LL+ R+ ++ ++ + + M+ YN ++ +Y G + + ++++
Sbjct: 300 YNTLLSACSRDSNLEGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFIELE 359
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G PD +Y + ++ ++ V Q+M+ D TY+T+ + Y G
Sbjct: 360 LKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMG-FGKDEMTYNTIIHMYGKQGQL 418
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQK----IKCKKQLNR 315
+ A+ K + + ++ DA+ Y LI SLG + ++ L + K L +
Sbjct: 419 DLALQLYKDMKGLSGRNPDAITYTVLID---SLGKANRSVEAAALMSEMLDVGIKPTL-Q 474
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
Y ++ K G+ EEAE S D +++L + KA + +++
Sbjct: 475 TYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWVLYRDM 534
Query: 376 VKKGKTPTPNSWSIIAAGYADKN---NMEKAFECMKE 409
+ G TP+ + + ++ G +N +++K M+E
Sbjct: 535 ISDGHTPSHSLYELMILGLMKENRSDDVQKTIRDMEE 571
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 98/209 (46%), Gaps = 6/209 (2%)
Query: 95 MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED-KVD-KLYGALLNCYVREGL 152
M G ++ + + ++L+ K + + AE + + + + KV+ ++ ++L Y
Sbjct: 883 MKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTVIED 942
Query: 153 VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
+++ + Q++KE G YN ++ +Y + E+ ++ M+ G+ P +Y+
Sbjct: 943 YKKTVQVYQRIKESGLEPDETTYNTLIIMYCRDRRPEEGYSLMQQMRNLGLDPKLDTYKS 1002
Query: 213 CINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDI 272
I+++G + L E + +E+ S+ + +D Y T+ +G KA L+ ++
Sbjct: 1003 LISAFGKQKCLEQAEQLFEELLSKG-LKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKN- 1060
Query: 273 VSKSKDALGYNHLI-SHYASLGNKDEMMK 300
+ + L HL+ Y+S GN E K
Sbjct: 1061 -AGIEPTLATMHLLMVSYSSSGNPQEAEK 1088
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/368 (20%), Positives = 153/368 (41%), Gaps = 44/368 (11%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+IR L R R +AL V + M + V + + L+ K G + A + + D+
Sbjct: 166 LIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKG 225
Query: 135 KVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+ Y ++N +EG VD+++ ++ + G + ++YN ++ + E
Sbjct: 226 CTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAE 285
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
+++ +M + G PP NV+ T++ + ++
Sbjct: 286 ELMGEMGQKGCPP----------------------NVV--------------TFNMLISF 309
Query: 253 YIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQ 312
GL E A+ L++ S ++L YN L+ + D+ M F L +
Sbjct: 310 LCRKGLVEPALEVLEQIPK-YGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYP 368
Query: 313 LNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
Y T+L +L + GE++ A ++L + + N ++ G ++ G ++A +L
Sbjct: 369 DIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELL 428
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILD 432
E+V KG P ++S IAAG ++ +E A + ++ RP L ++I+
Sbjct: 429 NEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKV-----QDMGIRPNTVLYNAIIL 483
Query: 433 WLGDNRDV 440
L R+
Sbjct: 484 GLCKRRET 491
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 52/278 (18%), Positives = 117/278 (42%), Gaps = 39/278 (14%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ L++ R+GLV+ +L +++++ + G ++L+YN ++ + + +K L M
Sbjct: 303 FNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV 362
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY-YIIAGL 258
G PD SY + + E+ +L +++ D G + +Y +I GL
Sbjct: 363 SRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLK-------DKGCAPVLISYNTVIDGL 415
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
+ K+K+AL L++ S G + +++ + + C++ D I
Sbjct: 416 TK------------AGKTKEAL---ELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAI 460
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
G + +G + + N I+LG ++ A + ++
Sbjct: 461 RAFGKVQDMGIRP----------------NTVLYNAIILGLCKRRETHSAIDLFAYMIGN 504
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEE 416
G P ++++I+ G A + +++A + + E + EE
Sbjct: 505 GCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGEE 542
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/362 (20%), Positives = 154/362 (42%), Gaps = 19/362 (5%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
+L++ L G VI L R A ++ M +G + ++ +
Sbjct: 268 LLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLC 327
Query: 116 KVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKM-KEMGSFGSALN 174
K+ +++A+ F + V ++ L++ +V G +D++ +++ M G
Sbjct: 328 KIGRVDAAKDLFYRIPKPTSV--IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCT 385
Query: 175 YNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEME 234
YN ++ Y G +VL DM+ G P+ +SY I ++ + ++ N+L EM
Sbjct: 386 YNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMS 445
Query: 235 SQSHISMDWGTYSTVANYYIIAGLKEKAIIYL----KKCEDIVSKSKDALGYNHLISHYA 290
+ G ++ + + E I+ K C+ D +N LIS
Sbjct: 446 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCK------PDVYTFNSLIS--- 496
Query: 291 SLGNKDEM-MKFWGLQKIKCKKQL--NRDYITMLGSLVKIGELEEAEKMLEEWELSCYCY 347
L DE+ W L+ + + + Y T++ + ++ GE++EA K++ E
Sbjct: 497 GLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLL 556
Query: 348 DFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECM 407
D N ++ G + G ++KA ++ +++++ G P+ S +I+ G +E+A E
Sbjct: 557 DEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQ 616
Query: 408 KE 409
KE
Sbjct: 617 KE 618
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 140/309 (45%), Gaps = 35/309 (11%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +L+ Y ++GLV +L +++ M+ G + +Y ++ + G+ ++ ++L +M
Sbjct: 386 YNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMS 445
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+G+ P+ + I+++ + + +EM + D T+++ +I+GL
Sbjct: 446 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG-CKPDVYTFNS-----LISGLC 499
Query: 260 E----KAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQL 313
E K ++L + D++S+ + + YN LI+ + G E K +
Sbjct: 500 EVDEIKHALWLLR--DMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLD 557
Query: 314 NRDYITMLGSLVKIGELEEA----EKMLEEW----ELSCYCYDFRVPNIILLGYSQKGMI 365
Y +++ L + GE+++A EKML + +SC NI++ G + GM+
Sbjct: 558 EITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISC--------NILINGLCRSGMV 609
Query: 366 EKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPS 425
E+A KE+V +G TP +++ + G +E ++ A + P
Sbjct: 610 EEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQA-----EGIPPDTV 664
Query: 426 LVSSILDWL 434
++++ WL
Sbjct: 665 TYNTLMSWL 673
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/364 (19%), Positives = 154/364 (42%), Gaps = 44/364 (12%)
Query: 88 ALQVSEWMSGQ-GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDK--LYGALL 144
++++ W Q G S + V + +G ++ + + DE V K L+ +++
Sbjct: 88 SMELFSWTGSQKGYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIM 147
Query: 145 NCYVREGLVDESLSLMQKMKEMGSFGSAL-NYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
Y + G ++ LM +M+ + S +YN ++ + + H+ +V DM +
Sbjct: 148 RDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKI 207
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN------------ 251
PP F++ + + + A +E+ S +VL++M + + Y T+ +
Sbjct: 208 PPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVP-NSVIYQTLIHSLSKCNRVNEAL 266
Query: 252 -----YYIIAGLKEK-----AIIYLKKCEDIVSKSK------------DALGYNHLISHY 289
+++ + + I+ L K + I +K D + Y +L++
Sbjct: 267 QLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGL 326
Query: 290 ASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELS-CYCYD 348
+G D + + K + + T++ V G L++A+ +L + S D
Sbjct: 327 CKIGRVDAAKDLF----YRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPD 382
Query: 349 FRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMK 408
N ++ GY +KG++ A VL+++ KG P S++I+ G+ +++A+ +
Sbjct: 383 VCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLN 442
Query: 409 EALA 412
E A
Sbjct: 443 EMSA 446
Score = 38.5 bits (88), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 87/210 (41%), Gaps = 11/210 (5%)
Query: 63 EGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDL------IGK 116
+G K +I L KHAL + M +G+ + + ++ I +
Sbjct: 482 KGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKE 541
Query: 117 VRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYN 176
R L + + SL DE Y +L+ R G VD++ SL +KM G S+++ N
Sbjct: 542 ARKLVNEMVFQGSLLDEIT----YNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCN 597
Query: 177 GIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQ 236
++ +G E+ + +M G PD ++ IN + + ++++++
Sbjct: 598 ILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAE 657
Query: 237 SHISMDWGTYSTVANYYIIAGLKEKAIIYL 266
I D TY+T+ ++ G A + L
Sbjct: 658 G-IPPDTVTYNTLMSWLCKGGFVYDACLLL 686
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 104/476 (21%), Positives = 203/476 (42%), Gaps = 67/476 (14%)
Query: 29 RAVKPVARN--NLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFK 86
R +P + L S +S LG +V++ + + + EG + + +I +L RF
Sbjct: 332 RGCRPNVQTYTALISGLSRLGKLEVAIG-LYHKMLKEGLVPNTVTYNALINELCVGGRFS 390
Query: 87 HALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALLNC 146
AL++ WM G G L + +TY +++ K G L
Sbjct: 391 TALKIFHWMEGHG-------------------SLANTQTY-------NEIIK--GLCLG- 421
Query: 147 YVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPD 206
G +++++ L +KM +MG + + YN ++ Y G +L MKENG PD
Sbjct: 422 ----GDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPD 477
Query: 207 NFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYL 266
++Y ++ + +L S QEM + ++ + +Y+ + + + G + A+ L
Sbjct: 478 EWTYNELVSGFSKWGKLESASFYFQEM-VECGLNPNPVSYTALIDGHSKDGKVDIALSLL 536
Query: 267 KKCEDIVSKSKDALGYNHLISHY-ASLGNKDEMMKFWGLQKIKCKKQLNR-------DYI 318
K+ E+ +G N + Y A + + +F +KI C K + + Y
Sbjct: 537 KRMEE--------MGCNPNVESYNAVINGLSKENRFSEAEKI-CDKMVEQGLLPNVITYT 587
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
T++ L + G + A K+ + E + + ++ G Q+G ++A+ + EI
Sbjct: 588 TLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAER-MSEI--- 643
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNR 438
G PT +++S + +G K +A E L + + + P + S+L N
Sbjct: 644 GCEPTLDTYSTLVSGLCRKGRFYEA-----EQLVKDMKERGFCPDREIYYSLLIAHCKNL 698
Query: 439 DVEEVEAFVSSLKIKVQKRNM--YHALTEAHIRSGQ--EVDGLLESMKADDIDEDK 490
+V+ S++ K + ++ Y AL A ++GQ E L ++M + + D+
Sbjct: 699 EVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADE 754
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 126/324 (38%), Gaps = 41/324 (12%)
Query: 118 RGLESAETYFNSLNDE--DKVDKLYGALLNCYVREGLVDESLSLMQ-------------- 161
R L+ A F+ + E D Y L+N EG VDE+L +++
Sbjct: 247 RNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTY 306
Query: 162 ---------------------KMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKE 200
+MK+ G + Y ++ + G+ E + M +
Sbjct: 307 TLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLK 366
Query: 201 NGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKE 260
G+ P+ +Y IN S+ + ME ++ + TY+ + + G E
Sbjct: 367 EGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLA-NTQTYNEIIKGLCLGGDIE 425
Query: 261 KAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITM 320
KA++ +K + + YN LI+ Y + GN + + L K + Y +
Sbjct: 426 KAMVLFEKMLKM-GPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNEL 484
Query: 321 LGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL-GYSQKGMIEKADAVLKEIVKKG 379
+ K G+LE A +E + C V L+ G+S+ G ++ A ++LK + + G
Sbjct: 485 VSGFSKWGKLESASFYFQEM-VECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMG 543
Query: 380 KTPTPNSWSIIAAGYADKNNMEKA 403
P S++ + G + +N +A
Sbjct: 544 CNPNVESYNAVINGLSKENRFSEA 567
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 72/350 (20%), Positives = 138/350 (39%), Gaps = 27/350 (7%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I+ R+ + + +SG G FS++ L + K +E A + + +
Sbjct: 134 MIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSG 193
Query: 135 KVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
L + L+N ++G V E+ ++ ++ + Y ++ + +
Sbjct: 194 IQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAF 253
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
V M + G P++ +Y IN + ++L+EM ++ G TV Y
Sbjct: 254 GVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEM-------IEKGIEPTVYTY 306
Query: 253 YI-IAGLKEKAIIYLKKCEDIVSKSK------DALGYNHLISHYASLGNKDEMMKFWGLQ 305
+ I L ++V++ K + Y LIS + LG + + GL
Sbjct: 307 TLPITALCAIEHEEEAI--ELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAI---GLY 361
Query: 306 KIKCKKQLNRDYIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQK 362
K+ L + +T ++ L G A K+ E + + N I+ G
Sbjct: 362 HKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLG 421
Query: 363 GMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADK---NNMEKAFECMKE 409
G IEKA + ++++K G PT +++ + GY K NN + + MKE
Sbjct: 422 GDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKE 471
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 143/370 (38%), Gaps = 25/370 (6%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
+ D+ + G L +I L + K A + + M G +V + V L +
Sbjct: 137 LFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLC 196
Query: 116 KVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
LE A T F + + Y LL+ + V+E L + M+ G + +
Sbjct: 197 SSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVI 256
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
++ ++ TG+ EK +V M E G P+ ++Y I S L E V+Q
Sbjct: 257 TFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLI------SGLCRAEKVIQAR 310
Query: 234 E-----SQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISH 288
E +Q+ I D Y+++ Y G ++A ++ + +N LI
Sbjct: 311 ELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDG 370
Query: 289 Y---ASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWEL--- 342
+ LG +E++ G + + R I L K+ E E K + E +
Sbjct: 371 FCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLD 430
Query: 343 SCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEK 402
C F + G + G I++A AV + K G P P ++ I++ +E
Sbjct: 431 PVSCVSF------VGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVED 484
Query: 403 AFECMKEALA 412
A + M+ A A
Sbjct: 485 AQKLMEPAKA 494
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 129/334 (38%), Gaps = 30/334 (8%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +++ V+E +ES ++++M G +NG+M + + EK +V M
Sbjct: 13 YSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMV 72
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL- 258
E+G PDN SY I I+ +L +L EM M T S A ++ L
Sbjct: 73 ESGYKPDNVSYHILIHGLAKIGKLDESLKILSEM------VMRGQTPSMQAYSSLVRALA 126
Query: 259 KEKAIIYLKKCEDIVSKS---KDALGYNHLISHYASLGN-KDEMMKFWGLQKIKCKKQLN 314
K + + + D + + D L + LI G KD +F + K C+ +
Sbjct: 127 KARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVP 186
Query: 315 RDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
Y +L L G+LE+A + E + D N +L + +E+ + +
Sbjct: 187 V-YNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEA 245
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWL 434
+ G P ++S + G +EKA E L +P ++++ L
Sbjct: 246 MRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAG-----CKPNKYTYTTLISGL 300
Query: 435 GDNRDVEEVEAFVSSLKIKVQKRNMYHALTEAHI 468
V +Q R ++ +T+A I
Sbjct: 301 CRAEKV-------------IQARELFEKMTQACI 321
>gi|449459510|ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Cucumis sativus]
gi|449530101|ref|XP_004172035.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Cucumis sativus]
Length = 680
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 160/352 (45%), Gaps = 18/352 (5%)
Query: 61 VLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRG 119
VL K EL ++ ++ L ++ +L + +W++ + L SV+ + V L + + +
Sbjct: 115 VLSPYKGRELSMRFMVSLLSRESDWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQ 174
Query: 120 LESAETYFNSLNDED-KVDK-LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNG 177
E A F+ + D+ Y L+ + +EG+ D +LS +QKM++ G + Y+
Sbjct: 175 WELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSN 234
Query: 178 IMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS 237
++ L + K + +K +G+ PD +Y IN +G +L+EM +
Sbjct: 235 LIELSRKLCDYSKAISIFSRLKRSGITPDIVAYNTMINVFGKAKLFREARFLLKEMRA-V 293
Query: 238 HISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDE 297
+ D +YST+ N ++ +A+ + + ++ V+ D N +I Y L E
Sbjct: 294 DVMPDTVSYSTLLNMFVENEKFLEALSVISEMKE-VNCPLDLTTCNIMIDVYGQLDMVKE 352
Query: 298 MMK-FWGLQKIKCKKQLNRDYITML---GSLVKIGELEEAEKMLEEWELSCYCYDFRVPN 353
+ FW ++KI + + Y T+L G GE ++++ E+ + N
Sbjct: 353 ADRLFWRMRKIGIEPNVV-SYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTY---N 408
Query: 354 IILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSII-----AAGYADKNNM 400
++ Y + EKA +++++ K+G P ++S I AG D++ M
Sbjct: 409 TMIKIYGKTLEHEKATNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAM 460
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 82/179 (45%), Gaps = 5/179 (2%)
Query: 83 KRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYF---NSLNDEDKVDKL 139
++F AL V M + + +D+ G++ ++ A+ F + E V
Sbjct: 313 EKFLEALSVISEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMRKIGIEPNVVS- 371
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +L Y L E++ L + M+ + + YN ++ +Y T +HEK +++ DM+
Sbjct: 372 YNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEHEKATNLVQDMQ 431
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
+ G+ P+ +Y I+ +G +L + Q++ S S +D Y T+ Y AGL
Sbjct: 432 KRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLRS-SGAEIDQVLYQTMIVAYEKAGL 489
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/336 (19%), Positives = 141/336 (41%), Gaps = 34/336 (10%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ++N + + L E+ L+++M+ + ++Y+ ++ ++ + + V+ +MK
Sbjct: 267 YNTMINVFGKAKLFREARFLLKEMRAVDVMPDTVSYSTLLNMFVENEKFLEALSVISEMK 326
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E P D + I I+ YG + + + M + I + +Y+T+ Y A L
Sbjct: 327 EVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMR-KIGIEPNVVSYNTILRVYGEAELF 385
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD--- 316
+AI +L + ++ + YN +I Y G E K L + K+ + +
Sbjct: 386 GEAI-HLFRLMQRKEIKQNVVTYNTMIKIY---GKTLEHEKATNLVQDMQKRGIEPNAIT 441
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y T++ K G+L+ + + ++ S D + +++ Y + G++ A +L E+
Sbjct: 442 YSTIISIWGKAGKLDRSAMLFQKLRSSGAEIDQVLYQTMIVAYEKAGLVGHAKRLLHELK 501
Query: 377 KKGKTPTPNSWSIIA-------AGYADKNNME-------KAFECM----------KEALA 412
+ P + +I+A A + + + FECM K L
Sbjct: 502 QPDNIPRTTAITILAKAGRIEEATWVFRQAFDAGELKDISVFECMIDLFSRNKKHKNVLE 561
Query: 413 VHEE--NKFWRPKPSLVSSILDWLGDNRDVEEVEAF 446
V E+ N P +++ +L+ G RD + +A
Sbjct: 562 VFEKMRNVGHFPNSDVIALVLNAYGKLRDFDTADAL 597
>gi|225457182|ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Vitis vinifera]
Length = 869
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 142/352 (40%), Gaps = 39/352 (11%)
Query: 95 MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGL 152
M+ G+ + ++ ++ GK+ LE + + Y LL + + G
Sbjct: 278 MNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGS 337
Query: 153 VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
+ E++ + ++M+ G +A Y+ ++ LY G+++ + D+ L+MK + P+ +Y I
Sbjct: 338 IKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNI 397
Query: 213 CINSYGARSELSSM---------ENVLQEMESQSHISMDWG------------------- 244
IN +G + ENV ME+ + G
Sbjct: 398 LINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKG 457
Query: 245 ------TYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEM 298
Y+ V Y A L E+A++ ++ SK YN LI +A G E
Sbjct: 458 VVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPT-VETYNSLIQMFAKGGLYKES 516
Query: 299 MKFWGLQKIKCKKQLNRD-YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL 357
L+ + NRD + ++ + + G+ EEA K E E + D + +L
Sbjct: 517 EAIL-LKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLS 575
Query: 358 GYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
Y G++E+++ EI G P+ + ++ A YA + + A + + E
Sbjct: 576 VYCFAGLVEESEEQFGEIKALGILPSVMCYCMMLAVYAKADRWDDAHQLLDE 627
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 72/391 (18%), Positives = 157/391 (40%), Gaps = 18/391 (4%)
Query: 90 QVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCY 147
++ + M G+A SV ++ G+ +S+ + + E + Y ++N
Sbjct: 167 EIFDEMPSHGVAPSVFSFTALINAYGRNGQYKSSLELLDRMKKERVSPSILTYNTVINSC 226
Query: 148 VREGL-VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPD 206
R GL +E L L +M+ G + YN ++ G ++ V M E G+ PD
Sbjct: 227 ARGGLDWEELLGLFAQMRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPD 286
Query: 207 NFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYL 266
+Y + ++G + L + +L+EMES D +Y+ + + +G ++A+
Sbjct: 287 ITTYSYLVETFGKLNRLEKVSELLKEMESGGSFP-DITSYNVLLEAHAQSGSIKEAMGVF 345
Query: 267 KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVK 326
++ + +A Y+ L++ Y G D++ + K+ + Y ++ +
Sbjct: 346 RQMQG-AGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGE 404
Query: 327 IGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNS 386
G +E + + + ++ + G+ E A +L + +KG P+ +
Sbjct: 405 GGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKA 464
Query: 387 WSIIAAGYADKNNMEK---AFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEV 443
++ + Y E+ AF M E + +P +S++ +E
Sbjct: 465 YTGVIEAYGQAALYEEALVAFNTMNEVGS--------KPTVETYNSLIQMFAKGGLYKES 516
Query: 444 EAFVSSLKIK--VQKRNMYHALTEAHIRSGQ 472
EA + + + R+ ++ + EA + GQ
Sbjct: 517 EAILLKMGQSGVARNRDTFNGVIEAFRQGGQ 547
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 105/255 (41%), Gaps = 38/255 (14%)
Query: 137 DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
+ +Y ++ REGL+++ + +M G S ++ ++ Y GQ++ ++L
Sbjct: 146 EHIYTIMIGVLGREGLLEKCQEIFDEMPSHGVAPSVFSFTALINAYGRNGQYKSSLELLD 205
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
MK+ V P +Y INS AR L DW + A
Sbjct: 206 RMKKERVSPSILTYNTVINSC-ARGGL------------------DWEELLG-----LFA 241
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEM-MKFWGLQKIKCKKQLNR 315
++ + I D + YN L+S A G DE M F + + +
Sbjct: 242 QMRHEGI------------QADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDIT- 288
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
Y ++ + K+ LE+ ++L+E E D N++L ++Q G I++A V +++
Sbjct: 289 TYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQM 348
Query: 376 VKKGKTPTPNSWSII 390
G P ++SI+
Sbjct: 349 QGAGCVPNAATYSIL 363
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 138/374 (36%), Gaps = 83/374 (22%)
Query: 86 KHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYF--NSLNDEDKVDKLYGAL 143
K A+ V M G G + +++ L+L G+ + F +++ + Y L
Sbjct: 339 KEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNIL 398
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
+N + G E ++L M E + Y G++ G HE +LL M E GV
Sbjct: 399 INVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGV 458
Query: 204 PPDNFSYRICINSYGARS---ELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL-K 259
P + +Y I +YG + E N + E+ S+ + TY+++ + GL K
Sbjct: 459 VPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVE----TYNSLIQMFAKGGLYK 514
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMK-FWGLQKIKC--------- 309
E I LK + V++++D +N +I + G +E +K + ++K +C
Sbjct: 515 ESEAILLKMGQSGVARNRDT--FNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEA 572
Query: 310 --------------KKQLNRD-----------YITMLGSLVKIGELEEAEKMLEE----- 339
++Q Y ML K ++A ++L+E
Sbjct: 573 VLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCMMLAVYAKADRWDDAHQLLDEMFTNR 632
Query: 340 ---------------------WELSCYCYD----------FRVPNIILLGYSQKGMIEKA 368
W++ Y ++ R N +L G E+A
Sbjct: 633 VSNIHQVIGQMIRGDYDDDSNWQMVEYVFEKLKSEGCSLGVRFYNTLLEALWWLGQKERA 692
Query: 369 DAVLKEIVKKGKTP 382
VL E K+G P
Sbjct: 693 TRVLNEATKRGLFP 706
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 89/406 (21%), Positives = 161/406 (39%), Gaps = 62/406 (15%)
Query: 47 GDPDV-----------------SLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHAL 89
GDPDV S V D+ G + +I L SR + + A
Sbjct: 127 GDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAF 186
Query: 90 QVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLY--GALLNCY 147
+V + + G SV + + ++ + A F+ L LY A++
Sbjct: 187 EVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGI 246
Query: 148 VREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDN 207
+EG+ D +L ++ + G ++YN ++ + N + E ++ DM +G P+
Sbjct: 247 CKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNV 306
Query: 208 FSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLK 267
++ I I+S+ + NVL+ M+ + ++ D +Y + + + G + AI YL+
Sbjct: 307 VTHSILISSFCREGRVREAVNVLEVMKEKG-LTPDSYSYDPLISAFCKEGRLDLAIEYLE 365
Query: 268 KCEDIVSKS--KDALGYNHLISHYASLGNKDEMMK-FWGLQKIKCKKQLNRDYITMLGSL 324
K +VS D + YN +++ G D + F L ++ C + R Y TM +L
Sbjct: 366 K---MVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTV-RAYNTMFSAL 421
Query: 325 VKIGELEEAEKMLEEW--------------ELSCYCYDFRVP------------------ 352
G +A +M+ E +SC C D V
Sbjct: 422 WSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTV 481
Query: 353 ---NIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYA 395
NI+LLG + + + +L +V+KG P S+ ++ G A
Sbjct: 482 ISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIA 527
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 50/296 (16%), Positives = 128/296 (43%), Gaps = 43/296 (14%)
Query: 117 VRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYN 176
+R +E ETY D D Y A+++ + + +D + + +M+ G + YN
Sbjct: 117 MRVMEILETY----GDPDVYS--YNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYN 170
Query: 177 GIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQ 236
++ + G+ E +V+ ++ ++G P +Y I I + ++ + E+ S+
Sbjct: 171 IMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSR 230
Query: 237 SHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKD 296
+ D TY+ + G++++A+ +++ H ++ G
Sbjct: 231 G-LRPDLYTYNAIIRGICKEGMEDRALDFVR--------------------HLSARGCNP 269
Query: 297 EMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIIL 356
+++ Y +L S + E+ E+++++ LS + +I++
Sbjct: 270 DVVS----------------YNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILI 313
Query: 357 LGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
+ ++G + +A VL+ + +KG TP S+ + + + + ++ A E +++ ++
Sbjct: 314 SSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVS 369
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 68/153 (44%), Gaps = 9/153 (5%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLI----GKVRGLESAETYFNSLNDEDKVDKLYGAL 143
AL V E + G +V + + K++ LE D D++ Y +L
Sbjct: 395 ALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEIT--YNSL 452
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
++C R+GLVDE++ L+ M+ + +++N ++ + + ++L+ M E G
Sbjct: 453 ISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGC 512
Query: 204 PPDNFSYRICINSY---GARSELSSMENVLQEM 233
P+ SY + I G R+E + N L +
Sbjct: 513 LPNETSYVLLIEGIAYAGWRAEAMELANSLYRL 545
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/363 (20%), Positives = 154/363 (42%), Gaps = 25/363 (6%)
Query: 120 LESAETYFNSLNDEDKVDKLY--GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNG 177
L SA +F+S+ + +Y L+ G E+LS+++ M+ G + + YN
Sbjct: 171 LTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNT 230
Query: 178 IMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS 237
++ + G+ + ++ M+E G+ P+ ++ +N ++ V EM +
Sbjct: 231 LVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREG 290
Query: 238 HISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNK 295
++ D +Y+T+ Y AG +A+ ++ K D + + LI GN
Sbjct: 291 -LAPDGVSYNTLVGGYCKAGCSHEALSVF---AEMTQKGIMPDVVTFTSLIHVMCKAGNL 346
Query: 296 DEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEE---AEKMLEEWEL--SCYCYDFR 350
+ + + + + + ++ K G L++ A + +++ + S CY
Sbjct: 347 ERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCY--- 403
Query: 351 VPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEA 410
N ++ GY G +++A +L E+ KG P ++S I + Y + AFE ++
Sbjct: 404 --NALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQM 461
Query: 411 LAVHEENKFWRPKPSLVSSILDWL-GDNRDVEEVEAFVSSLKIKVQKRNM-YHALTEAHI 468
L K P SS++ L G+ R + F + +K+ +Q Y +L + H
Sbjct: 462 L-----EKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHC 516
Query: 469 RSG 471
+ G
Sbjct: 517 KEG 519
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 83/422 (19%), Positives = 179/422 (42%), Gaps = 44/422 (10%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
V D+ V EG + ++ AL V M+ +G+ V + ++
Sbjct: 282 VFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMC 341
Query: 116 KVRGLESAETYFNSLNDED-KVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
K LE A T + + +++++ + AL++ + ++G +D++L ++ MK+ S +
Sbjct: 342 KAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVV 401
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
YN ++ Y G+ ++ ++L +M+ G+ PD +Y I++Y + S + Q+M
Sbjct: 402 CYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQM 461
Query: 234 ESQSHISMDWGTYSTVANYYIIAG---LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYA 290
+ + D TYS++ ++ G L + +++ + + D Y LI +
Sbjct: 462 LEKGVLP-DAITYSSLIR--VLCGEKRLSDAHVLFKNMIK--LGLQPDEFTYTSLIDGHC 516
Query: 291 SLGN-------KDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKML------ 337
GN D+M+K L + Y ++ L K EA+++L
Sbjct: 517 KEGNVESALSLHDKMVKAGVLPDVV-------TYSVLINGLSKSARAMEAQQLLFKLYHE 569
Query: 338 ------EEWELSCYC---YDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWS 388
+++ +C + + +L G+ KG++ +AD V + ++ + + +S
Sbjct: 570 DPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYS 629
Query: 389 IIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVS 448
++ G+ N+ KA K+ L + P + S++ L +N V E + +
Sbjct: 630 VLIHGHCRAGNVMKALSFHKQML-----QGGFAPNSTSTISLIRGLFENGMVVEADQVIQ 684
Query: 449 SL 450
L
Sbjct: 685 QL 686
>gi|356530296|ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 830
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 148/343 (43%), Gaps = 32/343 (9%)
Query: 69 ELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLD-----LIGKVRGLESA 123
E + +++ L ++ AL + EW G D ++LD L+ ++ G ES
Sbjct: 141 EADFPSLLKALDLSGNWERALLLFEW----GWLHFGSDQNLRLDNQVVELMVRILGRESQ 196
Query: 124 ETYFNSLNDEDKVDKL------YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNG 177
+ + L D V+K Y +L+ Y R G ++ L KM+ +G + + YN
Sbjct: 197 HSIASKLFDLIPVEKYSLDVRAYTTILHAYARSGKYKRAIDLFDKMEGIGLDPTLVTYNV 256
Query: 178 IMCLYTNTGQH-EKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQ 236
++ +Y G+ +I ++L +M+ G+ D F+ I++ G L L E++
Sbjct: 257 MLDVYGKMGRSWGRILELLDEMRSKGLEFDEFTCSTVISACGREGMLDEARKFLAELKLN 316
Query: 237 SHISMDWGT--YSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGN 294
+ GT Y+++ + AG+ +A+ LK+ ED + D++ YN L + Y G
Sbjct: 317 GYKP---GTVMYNSMLQVFGKAGIYTEALSILKEMED-NNCPPDSITYNELAATYVRAGF 372
Query: 295 KDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEW-ELSC----YCYDF 349
DE M K Y T++ + K G ++A ++ + +L C Y Y
Sbjct: 373 LDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSKMKDLGCAPNVYTY-- 430
Query: 350 RVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAA 392
N +L +K E VL E+ G P +W+ + A
Sbjct: 431 ---NSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLA 470
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 131/307 (42%), Gaps = 23/307 (7%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L YVR G +DE ++++ M G +A+ Y ++ Y G+ + + MK
Sbjct: 360 YNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSKMK 419
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHIS--MDWGTYSTVANYYIIAG 257
+ G P+ ++Y + G +S + VL EM+ W T V +
Sbjct: 420 DLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHN 479
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
K + +K C KD +N LIS YA G++ + K +G Y
Sbjct: 480 YVNKVLREMKNCG--FEPDKDT--FNTLISSYARCGSEVDSAKMYGEMVKSGFTPCVTTY 535
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
+L +L G+ + AE ++++ + + + +++L YS+ G + + V KEI
Sbjct: 536 NALLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSLLLHCYSKAGNVRGIEKVEKEIYD 595
Query: 378 KGKTPTPNSW----SIIAAGYADKN--NMEKAFECMKEALAVHEENKFWRPKPSLVSSIL 431
P SW +++ + + ++ ME+AF+ +++ ++P +++S+L
Sbjct: 596 GQVFP---SWILLRTLVLSNHKCRHLRGMERAFDQLQKY--------GYKPDLVVINSML 644
Query: 432 DWLGDNR 438
N+
Sbjct: 645 SMFSRNK 651
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 139/319 (43%), Gaps = 21/319 (6%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ L++ Y R G +S + +M + G YN ++ + G + V+ DM+
Sbjct: 500 FNTLISSYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAHRGDWKAAESVIQDMQ 559
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G P+ SY + ++ Y + +E V +E+ + W T+ +++ K
Sbjct: 560 TKGFKPNETSYSLLLHCYSKAGNVRGIEKVEKEI-YDGQVFPSWILLRTL----VLSNHK 614
Query: 260 EKAIIYLKKCEDIVSK---SKDALGYNHLISHYAS---LGNKDEMMKFWGLQKIKCKKQL 313
+ + +++ D + K D + N ++S ++ EM+ F +C Q
Sbjct: 615 CRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFSRNKMFSKAREMLHFIH----ECGLQP 670
Query: 314 NR-DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
N Y ++ V+ E +AE++L+ + S D N ++ G+ +KG++++A VL
Sbjct: 671 NLFTYNCLMDLYVREDECWKAEEVLKGIQNSVPEPDVVSYNTVIKGFCRKGLMQEAIRVL 730
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILD 432
E+ KG PT +++ +GYA ++A E ++ + E N RP ++D
Sbjct: 731 SEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMI---EHN--CRPSELTYKILVD 785
Query: 433 WLGDNRDVEEVEAFVSSLK 451
EE FV+ +K
Sbjct: 786 GYCKAGKHEEAMDFVTKIK 804
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 71/165 (43%), Gaps = 6/165 (3%)
Query: 57 LDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGK 116
DQ G K + + ++ K F A ++ ++ GL ++ + +DL +
Sbjct: 625 FDQLQKYGYKPDLVVINSMLSMFSRNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVR 684
Query: 117 VRGLESAETYF----NSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
AE NS+ + D V Y ++ + R+GL+ E++ ++ +M G +
Sbjct: 685 EDECWKAEEVLKGIQNSVPEPDVVS--YNTVIKGFCRKGLMQEAIRVLSEMTTKGIQPTI 742
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSY 217
+ YN + Y ++ +V+ M E+ P +Y+I ++ Y
Sbjct: 743 VTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGY 787
>gi|356562783|ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 859
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/364 (19%), Positives = 142/364 (39%), Gaps = 39/364 (10%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLN 145
A V M+ G+ ++ ++ + GK+ LE + + + Y LL
Sbjct: 261 AEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVLLE 320
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
Y G + E++ + ++M+ G +A Y+ ++ LY G+++ + D+ L+MK + P
Sbjct: 321 AYAELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDP 380
Query: 206 DNFSYRICINSYGARSELSSM---------ENVLQEMESQSHISMDWG------------ 244
D +Y I I +G + ENV ME+ + G
Sbjct: 381 DAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLYEDAKKIL 440
Query: 245 -------------TYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYAS 291
Y+ V + A L E+A++ + V + YN I +A
Sbjct: 441 LHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNE-VGSNPTVETYNSFIHAFAR 499
Query: 292 LGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWE-LSCYCYDFR 350
G E K+ + ++ + + G+ EEA K E E +C +
Sbjct: 500 GGLYKEAEAILSRMNESGLKRDVHSFNGVIKAFRQGGQYEEAVKSYVEMEKANCEPNELT 559
Query: 351 VPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEA 410
+ ++L Y G++++++ +EI G P+ + ++ A YA + + A+ + E
Sbjct: 560 L-EVVLSVYCSAGLVDESEEQFQEIKASGILPSVMCYCLMLALYAKNDRLNDAYNLIDEM 618
Query: 411 LAVH 414
+ +
Sbjct: 619 ITMR 622
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 95/480 (19%), Positives = 193/480 (40%), Gaps = 60/480 (12%)
Query: 38 NLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSG 97
L +RI+ L P S+ LD + K+S + V ++ R ++ +L++ ++M
Sbjct: 73 TLINRITAL-PPRGSIARCLDPF---KNKLSLNDFALVFKEFAQRGDWQRSLRLFKYMQR 128
Query: 98 Q-GLAFSVHDHAVQLDLIGKVRGLESAETYFNSL--NDEDKVDKLYGALLNCYVREGLVD 154
Q + H + + + L+G+ L+ F+ + N + +Y A++N Y R G
Sbjct: 129 QIWCKPNEHIYTIMITLLGREGLLDKCREVFDEMPSNGVARTVYVYTAVINAYGRNGQFH 188
Query: 155 ESLSLMQKMKEMGSFGSALNYN--------------GIMCLYTNTGQHEKI-PDVLL--- 196
SL L+ MK+ S L YN G++ L+ +HE I PDV+
Sbjct: 189 ASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEM-RHEGIQPDVITYNT 247
Query: 197 -------------------DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS 237
M E+G+ PD +Y + ++G + L + +L+EMES
Sbjct: 248 LLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMESGG 307
Query: 238 HISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDE 297
++ D +Y+ + Y G ++A+ ++ + +A Y+ L++ Y G D+
Sbjct: 308 NLP-DITSYNVLLEAYAELGSIKEAMDVFRQMQ-AAGCVANAATYSVLLNLYGKHGRYDD 365
Query: 298 MMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL 357
+ + K+ Y ++ + G +E + + + ++
Sbjct: 366 VRDIFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIF 425
Query: 358 GYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA---FECMKEALAVH 414
+ G+ E A +L + +KG P+ +++ + + E+A F M E +
Sbjct: 426 ACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVGS-- 483
Query: 415 EENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNM--YHALTEAHIRSGQ 472
P +S + +E EA +S + KR++ ++ + +A + GQ
Sbjct: 484 ------NPTVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIKAFRQGGQ 537
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/364 (20%), Positives = 162/364 (44%), Gaps = 14/364 (3%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
+L++ + G I+ +I L RF+ AL+ M + + + + L+G
Sbjct: 475 ILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMR---PNDGLLTTLVG 531
Query: 116 KV----RGLESAETYFNSLNDEDKVDKLY-GALLNCYVREGLVDESLSLMQKMKEMGSFG 170
+ + ++ E +F L + + AL++ + G + E++ L++KM E G
Sbjct: 532 GLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVL 591
Query: 171 SALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVL 230
+ YN ++ G+ E+ + +M + G+ PD F+Y + I+ +L N+
Sbjct: 592 DKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLW 651
Query: 231 QEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS--KDALGYNHLISH 288
E +S+ + + TY + + Y A E+ K ++++++ +++ YN LI
Sbjct: 652 NECKSRDLVPNVY-TYGVMIDGYCKADKIEEG---EKLFTELLTQNLELNSVVYNTLIRA 707
Query: 289 YASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYD 348
Y GN E K + K Y +++ + IG +E+A+ +++E +
Sbjct: 708 YCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPN 767
Query: 349 FRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMK 408
++ GY + G ++K VL+E+ P +++++ GY+ +M+ A + +
Sbjct: 768 VVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLH 827
Query: 409 EALA 412
E +
Sbjct: 828 EMVG 831
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 130/283 (45%), Gaps = 31/283 (10%)
Query: 136 VDKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDV 194
+DK+ Y L++ +EG V+E L +M + G YN ++ G+ ++ ++
Sbjct: 591 LDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNL 650
Query: 195 LLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYI 254
+ K + P+ ++Y + I+ Y ++ E + E+ +Q ++ ++ Y+T+ Y
Sbjct: 651 WNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQ-NLELNSVVYNTLIRAYC 709
Query: 255 IAGLKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNK-------DEMMKFWGLQ 305
G +A K +D+ SK Y+ LI ++G DEM K L
Sbjct: 710 RNGNTVEA---FKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLP 766
Query: 306 KIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPN-----IILLGYS 360
+ C Y ++G K+G++++ +L+E YD PN +++ GYS
Sbjct: 767 NVVC-------YTALIGGYCKLGQMDKVVNVLQEMS----SYDIH-PNKITYTVMIDGYS 814
Query: 361 QKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
+ G ++ A +L E+V KG P +++++ G+ + +E+
Sbjct: 815 KSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEG 857
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/343 (19%), Positives = 150/343 (43%), Gaps = 15/343 (4%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+N ++ +E+ S++++ E G + + YN ++ Y G + DM
Sbjct: 386 YSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMV 445
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G+ P++ + I + ++ E +L+EM S+ S++ G ++T+ ++ +
Sbjct: 446 SKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRG-FSINPGAFTTIIHWLCMNSRF 504
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
E A+ +L++ + D L L+ G + ++ W +K + +T
Sbjct: 505 ESALRFLREMLLRNMRPNDGL-LTTLVGGLCKEGKHSDAVELWFRL---LEKGFGANLVT 560
Query: 320 ---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
++ L K G ++EA ++L++ + D N ++ G ++G +E+ + E+V
Sbjct: 561 TNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMV 620
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGD 436
K+G P +++++ G +++A E +++ P ++D
Sbjct: 621 KQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNEC-----KSRDLVPNVYTYGVMIDGYCK 675
Query: 437 NRDVEEVEAFVSSLKIKVQKRN--MYHALTEAHIRSGQEVDGL 477
+EE E + L + + N +Y+ L A+ R+G V+
Sbjct: 676 ADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAF 718
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 8/202 (3%)
Query: 100 LAFSVHDHAVQLDLIGKVRGLESAETYFNSL--NDEDKVDKLYGALLNCYVREGLVDESL 157
L +V+ + V +D K +E E F L + + +Y L+ Y R G E+
Sbjct: 659 LVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAF 718
Query: 158 SLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSY 217
L M+ G + Y+ ++ N G+ E ++ +M++ G+ P+ Y I Y
Sbjct: 719 KLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGY 778
Query: 218 GARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS- 276
++ + NVLQEM S I + TY+ + + Y +G + A K ++V K
Sbjct: 779 CKLGQMDKVVNVLQEMSSYD-IHPNKITYTVMIDGYSKSGDMKTAA---KLLHEMVGKGI 834
Query: 277 -KDALGYNHLISHYASLGNKDE 297
D + YN L + + G +E
Sbjct: 835 VPDTVTYNVLTNGFCKEGKIEE 856
>gi|357529169|sp|Q9LMY5.3|PPR41_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g13630
Length = 826
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/391 (20%), Positives = 170/391 (43%), Gaps = 18/391 (4%)
Query: 105 HDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQK 162
H ++ +D + + + LE A + + +D + + ++++ Y + G VD + S
Sbjct: 230 HTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCT 289
Query: 163 MKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSE 222
+ + G S ++N ++ G + ++ DM ++GV PD+ +Y I +
Sbjct: 290 VLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGM 349
Query: 223 LSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS---KDA 279
+S V+++M + +S D TY+ + G + ++ LK D++S+
Sbjct: 350 ISGAWEVIRDMLDKG-LSPDVITYTILLCGQCQLGNIDMGLVLLK---DMLSRGFELNSI 405
Query: 280 LGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEE 339
+ + ++S G DE + + K Y ++ L K+G+ + A + +E
Sbjct: 406 IPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDE 465
Query: 340 WELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNN 399
+ R +LLG QKGM+ +A ++L ++ G+T ++I+ GYA
Sbjct: 466 MCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGC 525
Query: 400 MEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNM 459
+E+A E K + P + +S++ +++ E + +K+ ++
Sbjct: 526 IEEALELFKVVIETG-----ITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSV 580
Query: 460 --YHALTEAHIRSG--QEVDGLLESMKADDI 486
Y L +A+ G + +D L MKA+ I
Sbjct: 581 VSYTTLMDAYANCGNTKSIDELRREMKAEGI 611
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 79/189 (41%), Gaps = 31/189 (16%)
Query: 119 GLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGI 178
G+ + FNSL +YG Y + + E+ ++ +K G S ++Y +
Sbjct: 540 GITPSVATFNSL--------IYG-----YCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 586
Query: 179 MCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQE------ 232
M Y N G + I ++ +MK G+PP N +Y + + + +VL+E
Sbjct: 587 MDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKC 646
Query: 233 ------MESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDA--LGYNH 284
MES+ I D TY+T+ Y A ++L E + S++ DA YN
Sbjct: 647 KQGLRDMESEG-IPPDQITYNTIIQYLCRVKHLSGAFVFL---EIMKSRNLDASSATYNI 702
Query: 285 LISHYASLG 293
LI G
Sbjct: 703 LIDSLCVYG 711
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/341 (20%), Positives = 146/341 (42%), Gaps = 22/341 (6%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+ G ++E++ ++ M+ G +A+ YN ++ + G+ + V+ M+
Sbjct: 155 YNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMR 214
Query: 200 ENG-VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG- 257
E G P+ ++ +N + V EM + ++ D +Y+T+ + Y G
Sbjct: 215 EEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREG-LAPDVVSYNTLLSGYCKVGC 273
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
L E ++ + + D + + LI GN ++ + + + + +
Sbjct: 274 LHESLAVFSEMTQR--GLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTF 331
Query: 318 ITMLGSLVKIGELEEAEKMLEEW-----ELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
++ K G L++A +EE + S CY N ++ GY + G ++ A ++
Sbjct: 332 TALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCY-----NALINGYCKLGRMDLARELI 386
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILD 432
+E+ K P ++S I +GY N++ AF+ ++ L K P SS++
Sbjct: 387 REMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKML-----KKGVLPDAITYSSLIR 441
Query: 433 WLGDNRDVEE-VEAFVSSLKIKVQKRNM-YHALTEAHIRSG 471
L + + + + E F + L++ VQ Y L + H + G
Sbjct: 442 GLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEG 482
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 161/381 (42%), Gaps = 35/381 (9%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
V D+ V EG + ++ +L V M+ +GL V +
Sbjct: 245 VFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATC 304
Query: 116 KVRGLESAETYFNSLNDED-KVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
K LE A + + +++++ + AL++ + ++G +D++L +++M++ G S +
Sbjct: 305 KAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVV 364
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
YN ++ Y G+ + +++ +M+ V PD +Y I+ Y L S + Q+M
Sbjct: 365 CYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKM 424
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDI-----VSKSKDALGYNHLISH 288
+ + D TYS+ +I GL E+ + CE + D Y LI
Sbjct: 425 LKKGVLP-DAITYSS-----LIRGLCEEKRLN-DACELFENMLQLGVQPDEFTYTTLIDG 477
Query: 289 YASLGNKDEMMKFWGLQKIKCKKQLNRDYIT---MLGSLVKIGELEEAEKML-------- 337
+ GN + K L +K + D +T ++ L K +EA ++L
Sbjct: 478 HCKEGNVE---KALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDP 534
Query: 338 -------EEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSII 390
+ L C +F+ +L G+ KG++++AD V + ++ + + +SI+
Sbjct: 535 VPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSIL 594
Query: 391 AAGYADKNNMEKAFECMKEAL 411
G+ N+ KA K+ L
Sbjct: 595 IHGHCRGGNVRKALSFHKQML 615
>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
Length = 592
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 141/319 (44%), Gaps = 33/319 (10%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM---CLYTNTGQHEKIPDVLL 196
+ ++++ +EG V+++ +M M E G + + YN +M CL G+ +I D ++
Sbjct: 286 FNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMI 345
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
D G+ PD SY IN Y + ++ + +E IS + S V ++
Sbjct: 346 D---KGIEPDIISYTALINGYVEKKKMDKAMQLFRE------ISQNGLKPSIVTCSVLLR 396
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGY-NHLISHYASLGN-------KDEMMKFWGLQKIK 308
GL E + +C I A G+ +L +H LG ++ M F L++ +
Sbjct: 397 GLFE---VGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRR 453
Query: 309 CKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKA 368
+ + Y ++ L K G+L++A E+ L D ++ GY Q+G++++A
Sbjct: 454 EDTNI-QIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEA 512
Query: 369 DAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMK---------EALAVHEENKF 419
+L+++ G P ++++I G+ + + + +K EA V
Sbjct: 513 KDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLKEIAGKSFSFEAATVELLMDI 572
Query: 420 WRPKPSLVSSILDWLGDNR 438
PSL++ I ++ DN+
Sbjct: 573 IAEDPSLLNMIPEFHRDNK 591
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 85/176 (48%), Gaps = 2/176 (1%)
Query: 64 GQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESA 123
G K S + ++R L R + A + M G +++ H L K +E A
Sbjct: 383 GLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEA 442
Query: 124 ETYFNSL--NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCL 181
++F+ L ED ++Y A++N + G +D++ + +K+ +G + Y ++
Sbjct: 443 MSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISG 502
Query: 182 YTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS 237
Y G ++ D+L M++NG PDN +Y + + + S++S M+ L+E+ +S
Sbjct: 503 YCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLKEIAGKS 558
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 93/206 (45%), Gaps = 9/206 (4%)
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
G+P + ++ I A +++ ++ +++ ++ D Y TV + G +K
Sbjct: 137 GIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQK 196
Query: 262 AIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITML 321
A L+ E ++K D YN +I + G D K +K + D IT
Sbjct: 197 AFDLLRLMEQGITKP-DTCIYNIVIDAFCKDGMLDGATSLLNEMK---QKNIPPDIITYT 252
Query: 322 GSLVKIGELEEAEKM----LEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
+ +G+L + EK+ LE L+ Y D N ++ G ++G +E A+ ++ +++
Sbjct: 253 SLIDGLGKLSQWEKVRTLFLEMIHLNIY-PDVCTFNSVIDGLCKEGKVEDAEEIMTYMIE 311
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKA 403
KG P +++++ GY + M +A
Sbjct: 312 KGVEPNEITYNVVMDGYCLRGQMGRA 337
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 55/302 (18%), Positives = 126/302 (41%), Gaps = 41/302 (13%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+YG +++ ++G ++ L++ M++ + YN ++ + G + +L +M
Sbjct: 180 MYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEM 239
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN------- 251
K+ +PPD +Y I+ G S+ + + EM +I D T+++V +
Sbjct: 240 KQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEM-IHLNIYPDVCTFNSVIDGLCKEGK 298
Query: 252 ---------YYIIAGLKEKAIIY----------------LKKCEDIVSKS--KDALGYNH 284
Y I G++ I Y + + ++ K D + Y
Sbjct: 299 VEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTA 358
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT---MLGSLVKIGELEEAEKMLEEWE 341
LI+ Y D+ M+ + ++I + L +T +L L ++G E A+ +E +
Sbjct: 359 LINGYVEKKKMDKAMQLF--REIS-QNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQ 415
Query: 342 LSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNME 401
+ + + +L GY + G++E+A + ++ ++ + ++ + G ++
Sbjct: 416 AAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLD 475
Query: 402 KA 403
KA
Sbjct: 476 KA 477
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 132/285 (46%), Gaps = 31/285 (10%)
Query: 136 VDKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDV 194
+DK+ Y L++ +EG V+E L +M + G YN ++ G+ ++ ++
Sbjct: 524 LDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNL 583
Query: 195 LLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYI 254
+ K + P+ ++Y + I+ Y ++ E + E+ +Q ++ ++ Y+T+ Y
Sbjct: 584 WNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQ-NLELNSVVYNTLIRAYC 642
Query: 255 IAGLKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNK-------DEMMKFWGLQ 305
G +A K +D+ SK Y+ LI ++G DEM K L
Sbjct: 643 RNGNTVEA---FKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLP 699
Query: 306 KIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPN-----IILLGYS 360
+ C Y ++G K+G++++ +L+E YD PN +++ GYS
Sbjct: 700 NVVC-------YTALIGGYCKLGQMDKVVNVLQEMS----SYDIH-PNKITYTVMIDGYS 747
Query: 361 QKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
+ G ++ A +L E+V KG P +++++ G+ + +E+ F+
Sbjct: 748 KSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFK 792
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 131/278 (47%), Gaps = 16/278 (5%)
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
AL++ + G + E++ L++KM E G + YN ++ G+ E+ + +M +
Sbjct: 496 ALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQ 555
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
G+ PD F+Y + I+ +L N+ E +S+ + + TY + + Y A E+
Sbjct: 556 GIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVY-TYGVMIDGYCKADKIEE 614
Query: 262 AIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
K ++++++ +++ YN LI Y GN E K + K Y +
Sbjct: 615 G---EKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSS 671
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNII-----LLGYSQKGMIEKADAVLKE 374
++ + IG +E+A+ +++E + +PN++ + GY + G ++K VL+E
Sbjct: 672 LIHGMCNIGRMEDAKCLIDEMR-----KEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQE 726
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
+ P +++++ GY+ +M+ A + + E +
Sbjct: 727 MSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVG 764
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/343 (19%), Positives = 152/343 (44%), Gaps = 15/343 (4%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+N ++ +E+ S++++ E G + + YN ++ Y G + DM
Sbjct: 319 YSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMV 378
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G+ P++ + I + ++ E +L+EM S+ S++ G ++T+ ++ +
Sbjct: 379 SKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRG-FSINPGAFTTIIHWLCMNSRF 437
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
E A+ +L++ + D L L+ G + ++ W + + +K + +T
Sbjct: 438 ESALRFLREMLLRNMRPNDGL-LTTLVGGLCKEGKHSDAVELW-FRLL--EKGFGANLVT 493
Query: 320 ---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
++ L K G ++EA ++L++ + D N ++ G ++G +E+ + E+V
Sbjct: 494 TNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMV 553
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGD 436
K+G P +++++ G +++A E +++ P ++D
Sbjct: 554 KQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNEC-----KSRDLVPNVYTYGVMIDGYCK 608
Query: 437 NRDVEEVEAFVSSLKIKVQKRN--MYHALTEAHIRSGQEVDGL 477
+EE E + L + + N +Y+ L A+ R+G V+
Sbjct: 609 ADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAF 651
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 8/205 (3%)
Query: 100 LAFSVHDHAVQLDLIGKVRGLESAETYFNSL--NDEDKVDKLYGALLNCYVREGLVDESL 157
L +V+ + V +D K +E E F L + + +Y L+ Y R G E+
Sbjct: 592 LVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAF 651
Query: 158 SLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSY 217
L M+ G + Y+ ++ N G+ E ++ +M++ G+ P+ Y I Y
Sbjct: 652 KLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGY 711
Query: 218 GARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS- 276
++ + NVLQEM S I + TY+ + + Y +G + A K ++V K
Sbjct: 712 CKLGQMDKVVNVLQEMSSYD-IHPNKITYTVMIDGYSKSGDMKTAA---KLLHEMVGKGI 767
Query: 277 -KDALGYNHLISHYASLGNKDEMMK 300
D + YN L + + G +E K
Sbjct: 768 VPDTVTYNVLTNGFCKEGKIEEGFK 792
>gi|168005568|ref|XP_001755482.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693189|gb|EDQ79542.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 765
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 163/359 (45%), Gaps = 34/359 (9%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+YGA++N +GL E+ + Q+M + G + +Y+ ++ Y + G++++ VL +
Sbjct: 331 IYGAMMNVCASQGLDREAQATFQEMCDAGFTPNLFHYSSLLNAYASRGKYQQAERVLEAI 390
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG- 257
+ G+ P+ Y +N+Y S V +E++ + D ++ ++ + Y +
Sbjct: 391 RAAGLTPNLVVYNSLMNAYANCQMPSKAREVFDRIEAEG-LQRDMVSFCSMMDAYAKSDM 449
Query: 258 LKE-------------KAIIYLKKCEDIVSKSKD-----ALGYNHLISHYASLGNKDEMM 299
LKE K + L + D+ ++GY+ LIS YA LG D ++
Sbjct: 450 LKEAQETFDSMIAQGMKPVYMLMQLLDLSGSLCSYGWWGSVGYSILISAYAKLGEMDGVL 509
Query: 300 KFWGLQKIKCKKQLNRDYITMLGSLVKI----GELEEAEKMLEEWELSCYCYDFRVPNII 355
K + +I+ K Q I + +L+K+ G ++ +L++ + D NI+
Sbjct: 510 KL--VDQIE-KGQNGECDILLFNTLLKVYCNAGYMDGVTAVLKKMDAEGCGSDRGTFNIL 566
Query: 356 LLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHE 415
+ ++++ + + A L+++ +G P +++ + GY ME+ F EAL +
Sbjct: 567 IGYFAKEDLGDLALKTLEDMETRGHRPNEATYNALFQGYVKNGKMEEMF----EALEAMK 622
Query: 416 ENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK--VQKRNMYHALTEAHIRSGQ 472
+ SL + +L + NR ++ V A+ LK ++ L EA + +GQ
Sbjct: 623 QRGITPTNLSLQTIMLGCIEHNR-IDVVLAYFPYLKATGIALSYSVMERLVEALVETGQ 680
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 82/453 (18%), Positives = 184/453 (40%), Gaps = 78/453 (17%)
Query: 64 GQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESA 123
G + ++L V+R+ K+++ A V E+M + S + ++GK A
Sbjct: 183 GDSLEIMDLNSVLRRFAKMKQWRDACAVFEYMK-ENNKLSPPTYTSYFSVLGKSGQSRKA 241
Query: 124 ETYFNSLNDEDKVDK---LYGALLNCYVREGLVDESLSLMQKMKEMG------------- 167
FN L + +V K + ++L+ + G +D++ L +++K+ G
Sbjct: 242 IRVFNELPLDSEVRKNVFVCNSILSTMIYNGKIDKAFRLFEQLKKEGLQPDTVTYSTVIA 301
Query: 168 -------SFGSALN----------------YNGIMCLYTNTGQHEKIPDVLLDMKENGVP 204
+ AL Y +M + + G + +M + G
Sbjct: 302 GCAKTRDGYSKALALIEDIKASGLTQDAVIYGAMMNVCASQGLDREAQATFQEMCDAGFT 361
Query: 205 PDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAII 264
P+ F Y +N+Y +R + E VL+ + + + ++ + Y+++ N Y + KA
Sbjct: 362 PNLFHYSSLLNAYASRGKYQQAERVLEAIRA-AGLTPNLVVYNSLMNAYANCQMPSKARE 420
Query: 265 YLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMK----------FWGLQKIKCKKQL- 313
+ E +D + + ++ YA K +M+K G++ + QL
Sbjct: 421 VFDRIE-AEGLQRDMVSFCSMMDAYA----KSDMLKEAQETFDSMIAQGMKPVYMLMQLL 475
Query: 314 -------------NRDYITMLGSLVKIGELEEAEKMLEEWE--LSCYCYDFRVPNIILLG 358
+ Y ++ + K+GE++ K++++ E + C D + N +L
Sbjct: 476 DLSGSLCSYGWWGSVGYSILISAYAKLGEMDGVLKLVDQIEKGQNGEC-DILLFNTLLKV 534
Query: 359 YSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENK 418
Y G ++ AVLK++ +G +++I+ +A ++ + A + +++ E +
Sbjct: 535 YCNAGYMDGVTAVLKKMDAEGCGSDRGTFNILIGYFAKEDLGDLALKTLEDM-----ETR 589
Query: 419 FWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK 451
RP + +++ N +EE+ + ++K
Sbjct: 590 GHRPNEATYNALFQGYVKNGKMEEMFEALEAMK 622
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/341 (20%), Positives = 146/341 (42%), Gaps = 22/341 (6%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+ G ++E++ ++ M+ G +A+ YN ++ + G+ + V+ M+
Sbjct: 13 YNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMR 72
Query: 200 ENG-VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG- 257
E G P+ ++ +N + V EM + ++ D +Y+T+ + Y G
Sbjct: 73 EEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREG-LAPDVVSYNTLLSGYCKVGC 131
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
L E ++ + + D + + LI GN ++ + + + + +
Sbjct: 132 LHESLAVFSEMTQR--GLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTF 189
Query: 318 ITMLGSLVKIGELEEAEKMLEEW-----ELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
++ K G L++A +EE + S CY N ++ GY + G ++ A ++
Sbjct: 190 TALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCY-----NALINGYCKLGRMDLARELI 244
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILD 432
+E+ K P ++S I +GY N++ AF+ ++ L K P SS++
Sbjct: 245 REMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKML-----KKGVLPDAITYSSLIR 299
Query: 433 WLGDNRDVEE-VEAFVSSLKIKVQKRNM-YHALTEAHIRSG 471
L + + + + E F + L++ VQ Y L + H + G
Sbjct: 300 GLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEG 340
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 161/381 (42%), Gaps = 35/381 (9%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
V D+ V EG + ++ +L V M+ +GL V +
Sbjct: 103 VFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATC 162
Query: 116 KVRGLESAETYFNSLNDED-KVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
K LE A + + +++++ + AL++ + ++G +D++L +++M++ G S +
Sbjct: 163 KAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVV 222
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
YN ++ Y G+ + +++ +M+ V PD +Y I+ Y L S + Q+M
Sbjct: 223 CYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKM 282
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDI-----VSKSKDALGYNHLISH 288
+ + D TYS+ +I GL E+ + CE + D Y LI
Sbjct: 283 LKKGVLP-DAITYSS-----LIRGLCEEKRLN-DACELFENMLQLGVQPDEFTYTTLIDG 335
Query: 289 YASLGNKDEMMKFWGLQKIKCKKQLNRDYIT---MLGSLVKIGELEEAEKML-------- 337
+ GN + K L +K + D +T ++ L K +EA ++L
Sbjct: 336 HCKEGNVE---KALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDP 392
Query: 338 -------EEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSII 390
+ L C +F+ +L G+ KG++++AD V + ++ + + +SI+
Sbjct: 393 VPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSIL 452
Query: 391 AAGYADKNNMEKAFECMKEAL 411
G+ N+ KA K+ L
Sbjct: 453 IHGHCRGGNVRKALSFHKQML 473
>gi|168000162|ref|XP_001752785.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695948|gb|EDQ82289.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 482
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/392 (20%), Positives = 164/392 (41%), Gaps = 32/392 (8%)
Query: 63 EGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLE 121
E K+S+ ++ + +LR ++ L+V W+ Q F +HD + + GK+
Sbjct: 65 EDGKVSKGDVLGTLIRLRQLNKWTMVLEVLLWLKQQDWWNFGIHDFNLMIAAYGKLGQPG 124
Query: 122 SAETYFNSLND---EDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYN-- 176
AE F + + E V + +LL + R G + S+ Q+M + G + + Y
Sbjct: 125 IAELSFTEMREVGLEPNV-ACFTSLLEAHARTGNFVRAESIYQEMLKTGPAPTEVTYQVY 183
Query: 177 -GIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMES 235
+C E+I L + E PD Y + +++YG + S + + ++M+
Sbjct: 184 INALCKAERFNDAERIFKCLDESAE--AKPDARLYNLMLHTYGKAGKFSEQQALFRQMKG 241
Query: 236 QSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSK---DALGYNHLISHYASL 292
+ + M T++++ + +K + + C + +K D + Y LI+ Y+
Sbjct: 242 -AGVPMTVVTFNSLMAF-------QKTVADAEACLRHMQAAKIKPDVITYTGLINAYSKA 293
Query: 293 GNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVP 352
+E + + Y T+L + K E+E AE + + D R
Sbjct: 294 RRVEEAHVVFREMVASGLRPSRIAYNTLLDAYAKCKEVEGAESLFKSMGQDRCRPDIRSY 353
Query: 353 NIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYA---DKNNMEKAFECMKE 409
+L Y+ G ++KA+ +LK + + G P ++ + GY D N M + FE +++
Sbjct: 354 TTLLAAYANTGNMKKAERLLKRMKQAGLEPNVVTYGTLMQGYTSVHDINAMLQTFEDLQK 413
Query: 410 ALAVHEENKFWRPKPSLVSSILDWLGDNRDVE 441
A +P ++ + ++ G D E
Sbjct: 414 AGI--------KPNSTIFTLLVRTFGQQEDFE 437
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 73/153 (47%), Gaps = 2/153 (1%)
Query: 83 KRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSL-NDEDKVD-KLY 140
+R + A V M GL S + LD K + +E AE+ F S+ D + D + Y
Sbjct: 294 RRVEEAHVVFREMVASGLRPSRIAYNTLLDAYAKCKEVEGAESLFKSMGQDRCRPDIRSY 353
Query: 141 GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKE 200
LL Y G + ++ L+++MK+ G + + Y +M YT+ + D+++
Sbjct: 354 TTLLAAYANTGNMKKAERLLKRMKQAGLEPNVVTYGTLMQGYTSVHDINAMLQTFEDLQK 413
Query: 201 NGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
G+ P++ + + + ++G + + S + ++M
Sbjct: 414 AGIKPNSTIFTLLVRTFGQQEDFESALSWFKKM 446
>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 613
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 119/271 (43%), Gaps = 10/271 (3%)
Query: 86 KHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE--DKVDKLYGAL 143
K A + + ++ +GL + H + + L++AE N + + D ++ L
Sbjct: 337 KRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTL 396
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
+N Y ++G++DE+L + M++ G YN I +HE+ L M E GV
Sbjct: 397 INGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGV 456
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAI 263
P+ S+ I I+ + L E V Q+M+ + + TY+T+ + Y G K K
Sbjct: 457 DPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGE-KPNVVTYNTLIDGYSKKG-KLKEA 514
Query: 264 IYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT---M 320
LK + + + D Y L+ G +E + L ++ C+K L +T +
Sbjct: 515 YRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTL--LNEV-CRKGLAISIVTYTAI 571
Query: 321 LGSLVKIGELEEAEKMLEEWELSCYCYDFRV 351
+ L K G EEA ++ +E + D RV
Sbjct: 572 ISGLSKEGRSEEAFRLYDEMMAAGLTPDDRV 602
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 79/379 (20%), Positives = 156/379 (41%), Gaps = 47/379 (12%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
VI L + R + A + M+G+G+ +V + ++ K+ E L + D
Sbjct: 221 VIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLR-LMEMD 279
Query: 135 KV---DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
KV Y L+ Y G + E+ + +KM E G + I+ G ++
Sbjct: 280 KVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRA 339
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
+ ++ E G+ + +Y I+ +L + E ++ EM+SQ + M+ ++T+ N
Sbjct: 340 FALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQG-LDMNLVIFNTLIN 398
Query: 252 YYIIAGLKEKAIIYLKKCEDIVSKS---KDALGYNHLISHYASLGNKDEM---------- 298
Y G+ ++A+ + +D++ K D YN + L +E
Sbjct: 399 GYCKKGMIDEAL----RMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEK 454
Query: 299 ------MKFWGLQKIKCKK-------QLNRD------------YITMLGSLVKIGELEEA 333
+ F + I CK+ ++ +D Y T++ K G+L+EA
Sbjct: 455 GVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEA 514
Query: 334 EKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAG 393
++ +E E D ++ G G +E+A +L E+ +KG + +++ I +G
Sbjct: 515 YRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISG 574
Query: 394 YADKNNMEKAFECMKEALA 412
+ + E+AF E +A
Sbjct: 575 LSKEGRSEEAFRLYDEMMA 593
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 133/329 (40%), Gaps = 29/329 (8%)
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
SL +KM E + + ++ G+ E+ D++L+M G+ P+ +Y +N
Sbjct: 199 SLGFFKKMVEFKVDVTVYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVN 258
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG-LKEKAIIYLKKCEDIVS 274
+Y + + +L+ ME + + TY+ + +Y +G + E ++ K E V
Sbjct: 259 AYIKIMDFEGVNEMLRLME-MDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGV- 316
Query: 275 KSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
D + +IS LGN + + Y ++ G+L+ AE
Sbjct: 317 -EADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAE 375
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGY 394
++ E + + + N ++ GY +KGMI++A + + KKG +++ IA G
Sbjct: 376 MLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGL 435
Query: 395 ADKNNMEKAFECMKEALAVHEENKFW---------RPKPSLVSSILDWLGDNRDVEEVEA 445
N HEE K W P + ++D ++ E E
Sbjct: 436 CKLNR--------------HEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAER 481
Query: 446 FVSSLKIKVQKRNM--YHALTEAHIRSGQ 472
+K K +K N+ Y+ L + + + G+
Sbjct: 482 VFQDMKKKGEKPNVVTYNTLIDGYSKKGK 510
>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
Length = 601
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 171/385 (44%), Gaps = 55/385 (14%)
Query: 37 NNLYSRISPLG-DPDVSL-TPVLDQWVLEGQ-----KISELELQR-----------VIRQ 78
+ ++ +S LG +PDV + T +D +G+ K+ ++ +QR +I
Sbjct: 205 SKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINC 264
Query: 79 LRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDK 138
L + AL + M +G+A V + LI + G+ + L + + D
Sbjct: 265 LCKEGSVREALALRNEMDDKGVAPDVVTYNT---LIAGLSGVLEMDGAMGLLEEMIQGDT 321
Query: 139 L-------YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
L + ++++ + G + +++S+ + M E G + + YN ++ + +
Sbjct: 322 LVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMA 381
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
+++ ++ +G+ PD+F+Y I IN + E+ E L+ M +Q I + Y +
Sbjct: 382 MNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTM-TQRGIRAELFHYIPLLA 440
Query: 252 YYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKK 311
G+ E+A++ + + ++ DA+ Y+ ++ Y + + D IK K
Sbjct: 441 ALCQLGMMEQAMVLFNEMD--MNCGLDAVAYSTMM--YGACKSGD----------IKAAK 486
Query: 312 QLNRD------------YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGY 359
QL +D Y ++ K+G+LEEAE++L++ S + D V + ++ GY
Sbjct: 487 QLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGY 546
Query: 360 SQKGMIEKADAVLKEIVKKGKTPTP 384
S +G I K ++ E+ K P
Sbjct: 547 SAEGQINKILDLIHEMRAKNVAIDP 571
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 56/281 (19%), Positives = 114/281 (40%), Gaps = 43/281 (15%)
Query: 154 DESLSLMQKMKEMG------SFGS-------------ALNYNGIMC-------------- 180
DE+++L++ M+ G ++G+ AL G MC
Sbjct: 132 DEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCL 191
Query: 181 --LYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSH 238
Y +G+ + + V +M GV PD + I+ + + V +++ Q
Sbjct: 192 LRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKV-KDIMVQRG 250
Query: 239 ISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEM 298
+ + TY+ + N G +A+ + +D + D + YN LI+ + + D
Sbjct: 251 LEPNVVTYNVLINCLCKEGSVREALALRNEMDD-KGVAPDVVTYNTLIAGLSGVLEMDGA 309
Query: 299 MKFWGLQKIKCKKQLNRDYIT---MLGSLVKIGELEEAEKMLEEW-ELSCYCYDFRVPNI 354
M + I+ + D +T ++ L KIG + +A + E E C C + N
Sbjct: 310 MGLLE-EMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMC-NLVTYNY 367
Query: 355 ILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYA 395
++ G+ + + A ++ E++ G P ++SI+ G++
Sbjct: 368 LIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFS 408
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 128/276 (46%), Gaps = 8/276 (2%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ L++ + +EG V E+ +++ M + + YN +M Y Q K + M
Sbjct: 271 FSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMA 330
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ GV PD +SY I IN + + + +EM + I + TY+++ + +G
Sbjct: 331 QRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCK-QIFPNVVTYNSLVDGLCKSGRT 389
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD--- 316
A+ + + D + + + YN ++ + D+ + L KIK +K + D
Sbjct: 390 SCALELVDEMHD-RGQPSNIITYNSILDAICKNNHVDKAIVL--LTKIK-EKGIQPDIFT 445
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y ++ L K+G L++A+K+ E+ + Y + ++ G+ KG ++ A+L ++
Sbjct: 446 YTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMK 505
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
G P ++ I+ +K+ +KA + ++E +A
Sbjct: 506 DNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIA 541
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 47/85 (55%)
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
+LGSL+K + + A + ++ E + DF N+++ +SQ G I+ + +V +I+KKG
Sbjct: 64 ILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKG 123
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAF 404
P +++I+ G K + KA
Sbjct: 124 YHPDAVTFTILIKGLCLKGEVHKAL 148
Score = 41.6 bits (96), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 80/394 (20%), Positives = 154/394 (39%), Gaps = 56/394 (14%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+G +L ++ +LSL Q+M+ G + N +M ++ G + V +
Sbjct: 61 FGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKIL 120
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ G PD ++ I I + E+ ++ +Q +D +Y T+ N G
Sbjct: 121 KKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQG-FQLDQVSYGTLINGLCRVGET 179
Query: 260 EKAIIYLKK--------------------CED------------IVSK--SKDALGYNHL 285
+ A+ L++ C+D +VSK S D + Y+ L
Sbjct: 180 KAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSL 239
Query: 286 ISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT---MLGSLVKIGELEEAEKMLEEWEL 342
IS + +G + + +N + T ++ K G++ EA+ +L
Sbjct: 240 ISGFCVVGKLKYAVDLFNRM---ISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMK 296
Query: 343 SCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEK 402
D N ++ GY + KA ++ + ++G TP S+SI+ G+
Sbjct: 297 KNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFC------- 349
Query: 403 AFECMKEALAVHEENKFWRPKPSLVS--SILDWLGDNRDVEEVEAFVSSLKIKVQKRNM- 459
+ + EA+ + EE + P++V+ S++D L + V + + Q N+
Sbjct: 350 KIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNII 409
Query: 460 -YHALTEAHIRSGQEVDG---LLESMKADDIDED 489
Y+++ +A I VD LL +K I D
Sbjct: 410 TYNSILDA-ICKNNHVDKAIVLLTKIKEKGIQPD 442
>gi|302816774|ref|XP_002990065.1| hypothetical protein SELMODRAFT_130980 [Selaginella moellendorffii]
gi|300142185|gb|EFJ08888.1| hypothetical protein SELMODRAFT_130980 [Selaginella moellendorffii]
Length = 458
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 121/282 (42%), Gaps = 14/282 (4%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+ G + + L+ M G + + YN I+ Y +G +K+ D+ L M
Sbjct: 131 YSLLIKSCCDCGQLSRASDLLADMTARGIQPNRVTYNIILDAYAKSGSLDKLHDLALQML 190
Query: 200 ENGVP---PDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
++ P PD++S + +G R ++ ME Q + + S +S +A Y
Sbjct: 191 QSPSPSCRPDHWSRNAIVKGFGNRGDIRRMEEWFQRLTTPSDGPDSLTLHSLMAAYAKAE 250
Query: 257 GL-KEKAII-YLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN 314
K A++ Y+ + V DA+ YN LI+ Y G K +M+K + K + +
Sbjct: 251 MFDKMHAVVRYIHRYHYQV----DAVTYNILINAYGRAGRKTQMLKTFTSMKCGGVRPDS 306
Query: 315 RDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
Y T++ K G + ++LE+ + D + N +L Y + I D
Sbjct: 307 VTYCTLINFYGKFGMQRKLPRLLEQMSMHKVQPDTALYNSVLDAYRRASDISSIDRYFAA 366
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEE 416
+ ++G P +++I+ Y + +KA + +AV +E
Sbjct: 367 MQEQGCKPDHLTYNILIQAYRSQGLTDKA-----DVMAVEQE 403
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 2/129 (1%)
Query: 135 KVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPD 193
+VD + Y L+N Y R G + L MK G ++ Y ++ Y G K+P
Sbjct: 268 QVDAVTYNILINAYGRAGRKTQMLKTFTSMKCGGVRPDSVTYCTLINFYGKFGMQRKLPR 327
Query: 194 VLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYY 253
+L M + V PD Y +++Y S++SS++ M+ Q D TY+ + Y
Sbjct: 328 LLEQMSMHKVQPDTALYNSVLDAYRRASDISSIDRYFAAMQEQG-CKPDHLTYNILIQAY 386
Query: 254 IIAGLKEKA 262
GL +KA
Sbjct: 387 RSQGLTDKA 395
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 138/330 (41%), Gaps = 25/330 (7%)
Query: 154 DESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVP---PDNFSY 210
DE+ SL Q M G S + +M YT + +VL M N P PD F+Y
Sbjct: 74 DEAASLFQTMLADGCGPSREAFTALMSAYTRSNLMSTAMEVLQAM--NATPHCSPDVFTY 131
Query: 211 RICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG----LKEKAIIYL 266
+ I S +LS ++L +M ++ I + TY+ + + Y +G L + A+ L
Sbjct: 132 SLLIKSCCDCGQLSRASDLLADMTARG-IQPNRVTYNIILDAYAKSGSLDKLHDLALQML 190
Query: 267 KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVK 326
+ S D N ++ + + G+ M +++ Q++ D +T+ +
Sbjct: 191 QSPSP--SCRPDHWSRNAIVKGFGNRGDIRRMEEWF--QRLTTPSD-GPDSLTLHSLMAA 245
Query: 327 IGELEEAEKM---LEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPT 383
+ E +KM + Y D NI++ Y + G + + G P
Sbjct: 246 YAKAEMFDKMHAVVRYIHRYHYQVDAVTYNILINAYGRAGRKTQMLKTFTSMKCGGVRPD 305
Query: 384 PNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEV 443
++ + Y K M++ + E +++H+ +P +L +S+LD D+ +
Sbjct: 306 SVTYCTLINFYG-KFGMQRKLPRLLEQMSMHK----VQPDTALYNSVLDAYRRASDISSI 360
Query: 444 EAFVSSLKIKVQKRN--MYHALTEAHIRSG 471
+ + ++++ + K + Y+ L +A+ G
Sbjct: 361 DRYFAAMQEQGCKPDHLTYNILIQAYRSQG 390
>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
Length = 796
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 95/452 (21%), Positives = 195/452 (43%), Gaps = 35/452 (7%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
++D +G ++ +I R R ++ A Q+ + M G LD+ G
Sbjct: 243 LVDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYG 302
Query: 116 KVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
K R E A + + + Y +L++ YV++GL++E+L L Q+M+ G +
Sbjct: 303 KARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVV 362
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
Y ++ G+ + +M NG P+ +Y I +G R + + M V ++
Sbjct: 363 TYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDL 422
Query: 234 ESQSHISMDWGTYSTVANYYIIAGL-KEKAIIY--LKKCEDIVSKSKDALGYNHLISHYA 290
S ++ D T++T+ + GL E + ++ +KK I + Y LIS Y+
Sbjct: 423 RSAGYVP-DVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDT----YVSLISSYS 477
Query: 291 SLGNKDEMMKFWGLQKIKCKKQLNRD---YITMLGSLVKIGELEEAEKMLEEWELSCYCY 347
G D+ M+ + K + + D Y +L +L + G +AEK+ E E
Sbjct: 478 RCGLFDQAMEIY---KRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKP 534
Query: 348 DFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADK-----NNMEK 402
D + +L Y+ ++K A+ ++I + P++W + + + EK
Sbjct: 535 DELSYSSLLHAYANAKKLDKMKALSEDIY--AQRIEPHNWLVKTLVLVNNKVNSLSETEK 592
Query: 403 AFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKV--QKRNMY 460
AF+ ++ + N ++++++ G N+ V++VE ++ +K Y
Sbjct: 593 AFQELRRRRCSLDIN--------VLNAMVSIYGKNKMVKKVEEVLTLMKENSINHSAATY 644
Query: 461 HALTEAHIRSG--QEVDGLLESMKADDIDEDK 490
++L + R G ++ + +L +K+ + D+
Sbjct: 645 NSLMHMYSRLGDCEKCEAILTEIKSSGMRPDR 676
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 135/294 (45%), Gaps = 10/294 (3%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD-M 198
Y AL++ + R G +++++ ++M + G + + YN ++ +Y+ K VL+D M
Sbjct: 188 YTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVVVLVDSM 247
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
KE+G+ D ++Y I+ R + EM++ + D T++++ + Y A
Sbjct: 248 KEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKA-AGFEPDKVTFNSLLDVYGKARR 306
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
E+AI LKK E+ + + YN LIS Y G +E ++ + + K Y
Sbjct: 307 HEEAIGVLKKMEN-AGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYT 365
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
T++ L +IG+++ A E + + N ++ + +G + V ++
Sbjct: 366 TLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRSA 425
Query: 379 GKTPTPNSWSIIAAGYADK---NNMEKAFECMKEALAVHEENKFWRPKPSLVSS 429
G P +W+ + A + + + F+ MK+A + E + + SL+SS
Sbjct: 426 GYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYV----SLISS 475
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 94/461 (20%), Positives = 186/461 (40%), Gaps = 61/461 (13%)
Query: 28 YRAVKP--VARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRF 85
+R +KP V L S + +G D +L + V G + +I+ R +F
Sbjct: 354 FRGMKPDVVTYTTLISGLDRIGKIDAALA-TYSEMVRNGCSPNLCTYNALIKMHGVRGKF 412
Query: 86 KHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLES-AETYFNSLNDEDKVDK--LYGA 142
+ V + + G V L + G+ GL+S F + + + Y +
Sbjct: 413 TEMMIVFDDLRSAGYVPDVVTWNTLLAVFGQ-NGLDSEVSGVFKEMKKAGYIPERDTYVS 471
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
L++ Y R GL D+++ + ++M E G + YN ++ G+ + + +M++
Sbjct: 472 LISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRD 531
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
PD SY +++Y +L M+ + +++ +Q +W K
Sbjct: 532 CKPDELSYSSLLHAYANAKKLDKMKALSEDIYAQRIEPHNWLV---------------KT 576
Query: 263 IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN--RDYITM 320
++ + + +S+++ A F L++ +C +N +++
Sbjct: 577 LVLVNNKVNSLSETEKA---------------------FQELRRRRCSLDINVLNAMVSI 615
Query: 321 LGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGK 380
G + ++EE +++E ++ + N ++ YS+ G EK +A+L EI G
Sbjct: 616 YGKNKMVKKVEEVLTLMKENSINHSAATY---NSLMHMYSRLGDCEKCEAILTEIKSSGM 672
Query: 381 TPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSS---ILDWLGDN 437
P S++ + Y K MKEA + E K KP +V+ I ++ N
Sbjct: 673 RPDRYSYNTVIYAYGRKGQ-------MKEASRLFSEMKCSGVKPDIVTYNIFIKSYVA-N 724
Query: 438 RDVEEVEAFVSSLKIKVQKRN--MYHALTEAHIRSGQEVDG 476
EE V L + K N Y+++ E + R G+ V+
Sbjct: 725 LMFEEAIDLVRYLVAQGCKPNERTYNSILEGYCRHGRMVEA 765
>gi|240254074|ref|NP_172820.4| PPR repeat-containing protein [Arabidopsis thaliana]
gi|332190928|gb|AEE29049.1| PPR repeat-containing protein [Arabidopsis thaliana]
Length = 806
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/391 (20%), Positives = 170/391 (43%), Gaps = 18/391 (4%)
Query: 105 HDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQK 162
H ++ +D + + + LE A + + +D + + ++++ Y + G VD + S
Sbjct: 188 HTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCT 247
Query: 163 MKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSE 222
+ + G S ++N ++ G + ++ DM ++GV PD+ +Y I +
Sbjct: 248 VLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGM 307
Query: 223 LSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS---KDA 279
+S V+++M + +S D TY+ + G + ++ LK D++S+
Sbjct: 308 ISGAWEVIRDMLDKG-LSPDVITYTILLCGQCQLGNIDMGLVLLK---DMLSRGFELNSI 363
Query: 280 LGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEE 339
+ + ++S G DE + + K Y ++ L K+G+ + A + +E
Sbjct: 364 IPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDE 423
Query: 340 WELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNN 399
+ R +LLG QKGM+ +A ++L ++ G+T ++I+ GYA
Sbjct: 424 MCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGC 483
Query: 400 MEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNM 459
+E+A E K + P + +S++ +++ E + +K+ ++
Sbjct: 484 IEEALELFKVVIETG-----ITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSV 538
Query: 460 --YHALTEAHIRSG--QEVDGLLESMKADDI 486
Y L +A+ G + +D L MKA+ I
Sbjct: 539 VSYTTLMDAYANCGNTKSIDELRREMKAEGI 569
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 79/189 (41%), Gaps = 31/189 (16%)
Query: 119 GLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGI 178
G+ + FNSL +YG Y + + E+ ++ +K G S ++Y +
Sbjct: 498 GITPSVATFNSL--------IYG-----YCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 544
Query: 179 MCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQE------ 232
M Y N G + I ++ +MK G+PP N +Y + + + +VL+E
Sbjct: 545 MDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKC 604
Query: 233 ------MESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDA--LGYNH 284
MES+ I D TY+T+ Y A ++L E + S++ DA YN
Sbjct: 605 KQGLRDMESEG-IPPDQITYNTIIQYLCRVKHLSGAFVFL---EIMKSRNLDASSATYNI 660
Query: 285 LISHYASLG 293
LI G
Sbjct: 661 LIDSLCVYG 669
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 118/277 (42%), Gaps = 12/277 (4%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ++N Y G + + L L+Q+M+ G + YN I+ L +G+ + VL +M
Sbjct: 13 YSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMI 72
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G+ PD Y I+ + + + + EME Q I D+ Y+ V G
Sbjct: 73 NQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQ-RIVPDFIAYTAVICGLCRCGKM 131
Query: 260 EKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
+A K + S+ D + Y LI Y G EM K + L + L +
Sbjct: 132 MEADKVFNK---MFSRGVEPDEVTYTTLIDGYCKSG---EMEKAFSLHNQMVQSGLTPNV 185
Query: 318 IT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
+T + L K+G+++ A ++L E + N ++ G + G I +A +++E
Sbjct: 186 VTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEE 245
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
+ G P +++ + Y M KA E ++E L
Sbjct: 246 MEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREML 282
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/372 (20%), Positives = 159/372 (42%), Gaps = 29/372 (7%)
Query: 47 GD-PDV-SLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSV 104
GD PDV S + V++ + L G ELQ+V++ ++ M +GL ++
Sbjct: 5 GDAPDVVSYSTVINGYCLGG------ELQKVLKLIQE-------------MQMKGLKPNL 45
Query: 105 HDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDK--LYGALLNCYVREGLVDESLSLMQK 162
+ + + L+ K ++ AE + ++ V +Y L++ + + G + + L +
Sbjct: 46 YTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDE 105
Query: 163 MKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSE 222
M++ + Y ++C G+ + V M GV PD +Y I+ Y E
Sbjct: 106 MEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGE 165
Query: 223 LSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSK--DAL 280
+ ++ +M QS ++ + TY+ +A+ G + A L ++ K +
Sbjct: 166 MEKAFSLHNQM-VQSGLTPNVVTYTALADGLCKLGQVDTANELL---HEMCGKGLQLNIC 221
Query: 281 GYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEW 340
YN L++ GN + +K ++ + T++ + K GE+ +A ++L E
Sbjct: 222 TYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREM 281
Query: 341 ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNM 400
N+++ G+ GM+E + +L +++KG P +++ + Y +NNM
Sbjct: 282 LDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNM 341
Query: 401 EKAFECMKEALA 412
E K A
Sbjct: 342 RCTTEIYKGMCA 353
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 96/230 (41%), Gaps = 22/230 (9%)
Query: 101 AFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL---------------YGALLN 145
AFS+H+ VQ L V + L D ++L Y +L+N
Sbjct: 169 AFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVN 228
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
+ G + +++ LM++M+ G + + + +M Y TG+ K ++L +M + G+ P
Sbjct: 229 GLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQP 288
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA-GLKEKAII 264
++ + +N + L E +L M + I + TY+++ Y I ++ I
Sbjct: 289 TVITFNVLMNGFCMSGMLEDGERLLAWMLEKG-IMPNTTTYNSLMKQYCIRNNMRCTTEI 347
Query: 265 YLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN 314
Y C V D+ YN LI + N M + W L K +K N
Sbjct: 348 YKGMCARGV--MPDSNTYNILIKGHCKARN---MKEAWFLHKEMAEKGFN 392
>gi|218199303|gb|EEC81730.1| hypothetical protein OsI_25362 [Oryza sativa Indica Group]
Length = 583
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 151/362 (41%), Gaps = 54/362 (14%)
Query: 137 DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
+ +YG ++ Y R VD++ L +M+E A YN ++ ++ GQ +++
Sbjct: 11 NDIYGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIME 70
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
DM +PP +Y IN+ GA + ++M +++ + D T++ V
Sbjct: 71 DMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKM-TENGVGPDLVTHNIV------- 122
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
+S K+ Y+ IS++ E+MK G LN
Sbjct: 123 ----------------LSALKNGAQYSKAISYF-------EIMK--GANVTSDTFTLN-- 155
Query: 317 YITMLGSLVKIGELEEAEKM---LEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
++ LVKIG+ EA ++ + E C D I+ Y G +E A+
Sbjct: 156 --IIIHCLVKIGQCGEAIELFNSMRERRTKC-PPDVVTYTSIMHSYCIYGQVENCKAIFD 212
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVS--SIL 431
+V +G P +++ + YA + +EALA+ K +P +VS S+L
Sbjct: 213 LMVAEGVKPNIVAYNSLLGAYASRG-------MHREALAIFNLIKKNGLRPDIVSYTSLL 265
Query: 432 DWLGDNRDVEEVEAFVSSLKIKVQKRN--MYHALTEAHIRSG--QEVDGLLESMKADDID 487
+ G + E+ + +K K N Y+AL +A+ +G +E GLL M+ D I
Sbjct: 266 NAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQ 325
Query: 488 ED 489
D
Sbjct: 326 PD 327
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 94/206 (45%), Gaps = 14/206 (6%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +LL Y G+ E+L++ +K+ G ++Y ++ Y + Q EK +V MK
Sbjct: 226 YNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMK 285
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+N P+ SY I++YG+ L +L EME + I D + ST+ + A +
Sbjct: 286 KNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEME-KDGIQPDVVSISTL----LAACGR 340
Query: 260 EKAIIYLKKCEDIVSKSK------DALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQL 313
+ I + E I+ ++ + + YN I Y S G+ ++ ++ + + K
Sbjct: 341 CRQI---TRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPD 397
Query: 314 NRDYITMLGSLVKIGELEEAEKMLEE 339
Y ++ K+G+ E+ + E+
Sbjct: 398 AVTYNILISGSSKLGKYTESLRFFED 423
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 132/336 (39%), Gaps = 60/336 (17%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
+ D V EG K + + ++ SR + AL + + GL + + L+ G
Sbjct: 210 IFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYG 269
Query: 116 KVRGLESAETYFNSLNDED-KVDKL-YGALLNCYVREGLVDESLSLMQKMKEMG------ 167
+ E A FN + K +K+ Y AL++ Y G++ E++ L+ +M++ G
Sbjct: 270 RSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVV 329
Query: 168 --------------------------SFGSALN---YNGIMCLYTNTGQHEKIPDVLLDM 198
S G LN YN + Y + G +EK ++ M
Sbjct: 330 SISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSM 389
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
+E+ V PD +Y I I+ S+L L+ E +D ST + I L
Sbjct: 390 RESNVKPDAVTYNILIS---GSSKLGKYTESLRFFEDM----VDSKVSSTKEFLWTIRWL 442
Query: 259 KE----------KAIIYLKKCEDIV-----SKSKDALG-YNHLISHYASLGNKDEMMKFW 302
+E K I K +++ S S ++G NH+++ G + MMK +
Sbjct: 443 EESLGPVQRDGSKWIRDWKTASEMIEYLDSSLSSISVGTLNHVLNFLGKCGKTENMMKLF 502
Query: 303 GLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLE 338
C Y +L +L+ +G+ + ++L+
Sbjct: 503 YKMVTSCSTVGLSTYAVVLRNLLVVGKWRKYIEVLQ 538
>gi|222636666|gb|EEE66798.1| hypothetical protein OsJ_23544 [Oryza sativa Japonica Group]
Length = 665
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 151/365 (41%), Gaps = 60/365 (16%)
Query: 137 DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
+ +YG ++ Y R VD++ L +M+E A YN ++ ++ GQ +++
Sbjct: 11 NDIYGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIME 70
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
DM +PP +Y IN+ GA + ++M +++ + D T++ V
Sbjct: 71 DMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKM-TENGVGPDLVTHNIV------- 122
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
+S K+ Y+ IS++ E+MK + D
Sbjct: 123 ----------------LSALKNGAQYSKAISYF-------EIMK---------GANVTSD 150
Query: 317 YITM---LGSLVKIGELEEAEKM---LEEWELSCYCYDFRVPNIILLGYSQKGMIEKADA 370
T+ + LVKIG+ EA ++ + E C D I+ Y G +E A
Sbjct: 151 TFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCP-PDVVTYTSIMHSYCIYGQVENCKA 209
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVS-- 428
+ +V +G P +++ + YA + +EALA+ K +P +VS
Sbjct: 210 IFDLMVAEGVKPNIVAYNSLLGAYASRG-------MHREALAIFNLIKKNGLRPDIVSYT 262
Query: 429 SILDWLGDNRDVEEVEAFVSSLKIKVQKRN--MYHALTEAHIRSG--QEVDGLLESMKAD 484
S+L+ G + E+ + +K K N Y+AL +A+ +G +E GLL M+ D
Sbjct: 263 SLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKD 322
Query: 485 DIDED 489
I D
Sbjct: 323 GIQPD 327
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 143/355 (40%), Gaps = 61/355 (17%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +LL Y G+ E+L++ +K+ G ++Y ++ Y + Q EK +V MK
Sbjct: 226 YNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMK 285
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS---------------------- 237
+N P+ SY I++YG+ L +L EME
Sbjct: 286 KNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQIT 345
Query: 238 ------------HISMDWGTYSTVANYYIIAGLKEKAI-IYLKKCEDIVSKSKDALGYNH 284
I ++ Y++ Y+ G EKA+ +Y E V DA+ YN
Sbjct: 346 RIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNV--KPDAVTYNI 403
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSC 344
LIS + LG E ++F+ D + S K G+L EAE + S
Sbjct: 404 LISGSSKLGKYTESLRFF------------EDMVDSKVSSTKEGKLSEAESTFSSMKKSG 451
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
D ++ Y+ G ++A + KE+ G P S + + E+
Sbjct: 452 CFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPERVL 511
Query: 405 ECM----KEALAVHEENKFWRPKPSLVSS---ILDWLGDNRDVEEVEAFVSSLKI 452
+ M K+++ +++++ F +++S I DW + +E +++ +SS+ +
Sbjct: 512 QLMEFMKKKSIPLNQKSYF-----EIIASCTMIRDWKTASEMIEYLDSSLSSISV 561
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 14/197 (7%)
Query: 148 VREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDN 207
+EG + E+ S MK+ G F L Y ++ Y G ++ D+ +M+ NG+PPD
Sbjct: 432 TKEGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDA 491
Query: 208 FSYRICINSYGARSELSSMENVLQEME--SQSHISMDWGTY-STVANYYIIAGLKEKA-- 262
IC + A ++ E VLQ ME + I ++ +Y +A+ +I K +
Sbjct: 492 I---ICSSLMEAFNKGGEPERVLQLMEFMKKKSIPLNQKSYFEIIASCTMIRDWKTASEM 548
Query: 263 IIYLKKCEDIVSKSKDALG-YNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITML 321
I YL S S ++G NH+++ G + MMK + C Y +L
Sbjct: 549 IEYLDS-----SLSSISVGTLNHVLNFLGKCGKTENMMKLFYKMVTSCSTVGLSTYAVVL 603
Query: 322 GSLVKIGELEEAEKMLE 338
+L+ +G+ + ++L+
Sbjct: 604 RNLLVVGKWRKYIEVLQ 620
>gi|414591141|tpg|DAA41712.1| TPA: hypothetical protein ZEAMMB73_063178 [Zea mays]
Length = 374
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 125/292 (42%), Gaps = 26/292 (8%)
Query: 140 YGALLNCYVRE---GLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
Y +LL+CYVR+ G V E L +M+ + G G P VL
Sbjct: 52 YNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGD--------------GTCGGPPKVLD 97
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
+ NGV P+ +Y + IN + ++ + E +L +M+ Q + ++ ++T+ + Y
Sbjct: 98 ECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQG-VGLNQIIFNTMIDGYCRK 156
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
G+ + A+ +K + + D YN L + DE +
Sbjct: 157 GMVDDAL-KIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVT 215
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y T++ K G++ EA ++ E N+++ GY++KG I +A+ KE+
Sbjct: 216 YTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIHGYAKKGSIREAERFRKEME 275
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVS 428
KKG P +++ + G+ ++ AL + EE K +P++V+
Sbjct: 276 KKGFVPDVYTYASLVHGHCVNGKVDV-------ALKLFEEMKQRGTEPNVVA 320
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 73/165 (44%), Gaps = 6/165 (3%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L R +DE+ +L+ M EMG + + Y ++ ++ G + + +M
Sbjct: 181 YNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMA 240
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E G P +Y + I+ Y + + E +EME + + D TY+++ + + + G
Sbjct: 241 EKGATPSVVTYNVMIHGYAKKGSIREAERFRKEMEKKGFVP-DVYTYASLVHGHCVNG-- 297
Query: 260 EKAIIYLKKCEDIVSKSKD--ALGYNHLISHYASLGNKDEMMKFW 302
K + LK E++ + + + Y LIS A G + + +
Sbjct: 298 -KVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLY 341
>gi|334182559|ref|NP_001184987.1| PPR repeat-containing protein [Arabidopsis thaliana]
gi|332190929|gb|AEE29050.1| PPR repeat-containing protein [Arabidopsis thaliana]
Length = 798
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/391 (20%), Positives = 170/391 (43%), Gaps = 18/391 (4%)
Query: 105 HDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQK 162
H ++ +D + + + LE A + + +D + + ++++ Y + G VD + S
Sbjct: 188 HTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCT 247
Query: 163 MKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSE 222
+ + G S ++N ++ G + ++ DM ++GV PD+ +Y I +
Sbjct: 248 VLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGM 307
Query: 223 LSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS---KDA 279
+S V+++M + +S D TY+ + G + ++ LK D++S+
Sbjct: 308 ISGAWEVIRDMLDKG-LSPDVITYTILLCGQCQLGNIDMGLVLLK---DMLSRGFELNSI 363
Query: 280 LGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEE 339
+ + ++S G DE + + K Y ++ L K+G+ + A + +E
Sbjct: 364 IPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDE 423
Query: 340 WELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNN 399
+ R +LLG QKGM+ +A ++L ++ G+T ++I+ GYA
Sbjct: 424 MCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGC 483
Query: 400 MEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNM 459
+E+A E K + P + +S++ +++ E + +K+ ++
Sbjct: 484 IEEALELFKVVIETG-----ITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSV 538
Query: 460 --YHALTEAHIRSG--QEVDGLLESMKADDI 486
Y L +A+ G + +D L MKA+ I
Sbjct: 539 VSYTTLMDAYANCGNTKSIDELRREMKAEGI 569
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 79/189 (41%), Gaps = 31/189 (16%)
Query: 119 GLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGI 178
G+ + FNSL +YG Y + + E+ ++ +K G S ++Y +
Sbjct: 498 GITPSVATFNSL--------IYG-----YCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 544
Query: 179 MCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQE------ 232
M Y N G + I ++ +MK G+PP N +Y + + + +VL+E
Sbjct: 545 MDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKC 604
Query: 233 ------MESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDA--LGYNH 284
MES+ I D TY+T+ Y A ++L E + S++ DA YN
Sbjct: 605 KQGLRDMESEG-IPPDQITYNTIIQYLCRVKHLSGAFVFL---EIMKSRNLDASSATYNI 660
Query: 285 LISHYASLG 293
LI G
Sbjct: 661 LIDSLCVYG 669
>gi|302810470|ref|XP_002986926.1| hypothetical protein SELMODRAFT_125134 [Selaginella moellendorffii]
gi|300145331|gb|EFJ12008.1| hypothetical protein SELMODRAFT_125134 [Selaginella moellendorffii]
Length = 458
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 120/282 (42%), Gaps = 14/282 (4%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+ G + + L+ M G + + YN I+ Y G +K+ D+ L M
Sbjct: 131 YSLLIKSCCDCGQLSRAADLLADMTARGIQPNRVTYNIILDAYAKCGSLDKLHDLALQML 190
Query: 200 ENGVP---PDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
++ P PD++S + +G R ++ ME Q + + S +S +A Y
Sbjct: 191 QSPSPSCRPDHWSRNAIVKGFGNRGDIRRMEEWFQRLTTPSDGPDSLTLHSLMAAYAKAE 250
Query: 257 GL-KEKAII-YLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN 314
K A++ Y+ + V DA+ YN LI+ Y G K +M+K + K + +
Sbjct: 251 MFDKMHAVVRYIHRYHYQV----DAVTYNILINAYGRAGRKTQMLKTFTSMKCGGVRPDS 306
Query: 315 RDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
Y T++ K G + ++LE+ + D + N +L Y + I D
Sbjct: 307 VTYCTLINFYGKFGMQRKLPRLLEQMSMHKVQPDTALYNSVLDAYRRASDISSIDRYFAA 366
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEE 416
+ ++G P +++I+ Y + +KA + +AV +E
Sbjct: 367 MQEQGCKPDHLTYNILIQAYRSQGLTDKA-----DVMAVEQE 403
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 2/129 (1%)
Query: 135 KVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPD 193
+VD + Y L+N Y R G + L MK G ++ Y ++ Y G K+P
Sbjct: 268 QVDAVTYNILINAYGRAGRKTQMLKTFTSMKCGGVRPDSVTYCTLINFYGKFGMQRKLPR 327
Query: 194 VLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYY 253
+L M + V PD Y +++Y S++SS++ M+ Q D TY+ + Y
Sbjct: 328 LLEQMSMHKVQPDTALYNSVLDAYRRASDISSIDRYFAAMQEQG-CKPDHLTYNILIQAY 386
Query: 254 IIAGLKEKA 262
GL +KA
Sbjct: 387 RSQGLTDKA 395
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 137/330 (41%), Gaps = 25/330 (7%)
Query: 154 DESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVP---PDNFSY 210
DE+ SL Q M G S + +M YT + +VL M N P PD F+Y
Sbjct: 74 DEAASLFQTMLADGCGPSREAFTALMSAYTRSNLMSTAMEVLQAM--NATPHCSPDVFTY 131
Query: 211 RICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG----LKEKAIIYL 266
+ I S +LS ++L +M ++ I + TY+ + + Y G L + A+ L
Sbjct: 132 SLLIKSCCDCGQLSRAADLLADMTARG-IQPNRVTYNIILDAYAKCGSLDKLHDLALQML 190
Query: 267 KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVK 326
+ S D N ++ + + G+ M +++ Q++ D +T+ +
Sbjct: 191 QSPSP--SCRPDHWSRNAIVKGFGNRGDIRRMEEWF--QRLTTPSD-GPDSLTLHSLMAA 245
Query: 327 IGELEEAEKM---LEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPT 383
+ E +KM + Y D NI++ Y + G + + G P
Sbjct: 246 YAKAEMFDKMHAVVRYIHRYHYQVDAVTYNILINAYGRAGRKTQMLKTFTSMKCGGVRPD 305
Query: 384 PNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEV 443
++ + Y K M++ + E +++H+ +P +L +S+LD D+ +
Sbjct: 306 SVTYCTLINFYG-KFGMQRKLPRLLEQMSMHK----VQPDTALYNSVLDAYRRASDISSI 360
Query: 444 EAFVSSLKIKVQKRN--MYHALTEAHIRSG 471
+ + ++++ + K + Y+ L +A+ G
Sbjct: 361 DRYFAAMQEQGCKPDHLTYNILIQAYRSQG 390
>gi|297842227|ref|XP_002888995.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
gi|297334836|gb|EFH65254.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
Length = 863
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 121/279 (43%), Gaps = 10/279 (3%)
Query: 95 MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGL 152
M+ G+ + ++ ++ GK+R LE + + + + Y LL Y + G
Sbjct: 273 MNDGGIVPDLTTYSHLVETFGKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGS 332
Query: 153 VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
+ E++ + +M+ G +A Y+ ++ L+ +G+++ + + L+MK + PD +Y I
Sbjct: 333 IKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNI 392
Query: 213 CINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA--IIYLKKCE 270
I +G + + +M + +I D TY + GL E A I+
Sbjct: 393 LIEVFGEGGYFKEVVTLFHDM-VEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTAN 451
Query: 271 DIVSKSKDALGYNHLISHYASLGNKDE-MMKFWGLQKIKCKKQLNRDYITMLGSLVKIGE 329
DIV SK Y +I + +E ++ F + ++ + Y ++L S + G
Sbjct: 452 DIVPSSK---AYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSI-ETYHSLLYSFARGGL 507
Query: 330 LEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKA 368
++E+E +L S + N + Y Q G E+A
Sbjct: 508 VKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEA 546
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 108/258 (41%), Gaps = 44/258 (17%)
Query: 137 DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
+ +Y +++ REGL+D+ L + +M G S +Y ++ Y G++E ++L
Sbjct: 141 EHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLD 200
Query: 197 DMKENGVPPDNFSYRICINSYGARSELS--SMENVLQEMESQSHISMDWGTYSTVANYYI 254
MK + + P +Y IN+ AR L + + EM + I D TY+T+ +
Sbjct: 201 RMKNDKISPSILTYNTVINAC-ARGGLDWEGLLGLFAEMRHEG-IQPDIVTYNTLLSACA 258
Query: 255 IAGLKEKAIIYLKKCED--IVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQ 312
I GL ++A + + D IV D Y+HL+ +
Sbjct: 259 IRGLGDEAEMVFRTMNDGGIV---PDLTTYSHLVETFG---------------------- 293
Query: 313 LNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
K+ LE+ +L E D N++L Y++ G I++A V
Sbjct: 294 -------------KLRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVF 340
Query: 373 KEIVKKGKTPTPNSWSII 390
++ G TP N++S++
Sbjct: 341 HQMQAAGCTPNANTYSVL 358
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/368 (20%), Positives = 154/368 (41%), Gaps = 18/368 (4%)
Query: 57 LDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGK 116
+ Q + +G + ++ + L HAL+V + M +G V + ++ + K
Sbjct: 290 IQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSK 349
Query: 117 VRGLESAETYFNSLNDEDKV--DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALN 174
L+ A+ N + D + + L+ + ++E+L L +++ G
Sbjct: 350 NGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYT 409
Query: 175 YNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEME 234
+N ++ G + +MK +G PD +Y I I+ + +L + ++L EME
Sbjct: 410 FNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEME 469
Query: 235 SQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK------SKDALGYNHLISH 288
S + STV II L +K + +++ E++ + S+ A+ +N LI
Sbjct: 470 S------NGCPRSTVTYNTIIDALCKK--MRIEEAEEVFDQMDAQGISRSAVTFNTLIDG 521
Query: 289 YASLGNKDEMMKFWGLQKIKCKKQLNR-DYITMLGSLVKIGELEEAEKMLEEWELSCYCY 347
D+ + Q +K Q N Y ++L K G +++A +LE + +
Sbjct: 522 LCKAKRIDDATELIE-QMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEI 580
Query: 348 DFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECM 407
D ++ G + G + A +L+ + KG PTP +++ + +NN+ A
Sbjct: 581 DVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLF 640
Query: 408 KEALAVHE 415
+E V E
Sbjct: 641 REMTEVGE 648
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/308 (20%), Positives = 128/308 (41%), Gaps = 43/308 (13%)
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGI---MCLYTNTGQHEKIPDVLLDMK 199
L+N Y + G V+++L +Q+ G + YN +C + K+ D++L
Sbjct: 273 LINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLML--- 329
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYST----------- 248
+ G PD F+Y IN EL + ++ +M + + D T++T
Sbjct: 330 QEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLP-DTTTFNTLIVALSSQNRL 388
Query: 249 -----VANYYIIAGLKEKAIIY----------------LKKCEDIVSK--SKDALGYNHL 285
+A + GL + ++ E++ S + D + YN L
Sbjct: 389 EEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNIL 448
Query: 286 ISHYASLGNKDEMMKFWG-LQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSC 344
I H S+G + ++ C + Y T++ +L K +EEAE++ ++ +
Sbjct: 449 IDHLCSMGKLGNALDLLNEMESNGCPRS-TVTYNTIIDALCKKMRIEEAEEVFDQMDAQG 507
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
N ++ G + I+ A +++++VK+G P +++ I Y + N++KA
Sbjct: 508 ISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAA 567
Query: 405 ECMKEALA 412
+ ++ A
Sbjct: 568 DILETMTA 575
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 80/182 (43%), Gaps = 3/182 (1%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
N L + + +GDP + + + ++ G E+ +I L S + +AL + M
Sbjct: 411 NILINALCKVGDPHLGIR-LFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEME 469
Query: 97 GQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE--DKVDKLYGALLNCYVREGLVD 154
G S + +D + K +E AE F+ ++ + + + L++ + +D
Sbjct: 470 SNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRID 529
Query: 155 ESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICI 214
++ L+++M + G + + YN I+ Y G +K D+L M NG D +Y I
Sbjct: 530 DATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLI 589
Query: 215 NS 216
N
Sbjct: 590 NG 591
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 100/230 (43%), Gaps = 12/230 (5%)
Query: 192 PDVLLDMKENGVPPDNFS-----YRICINSYGARSELSSMENVLQEMESQSHISMDWGTY 246
P+ L M + + ++F+ Y + G ME +++EM + H
Sbjct: 69 PEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVR 128
Query: 247 STVANYYIIAGLKEKAIIYLKKCE-DIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQ 305
S V +Y + + + L + + D D + +NHL++ G+K ++++ +
Sbjct: 129 SFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVE-GSKLKLLE--SVY 185
Query: 306 KIKCKKQLNRDYITM---LGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQK 362
+ + D +T+ + +L + ++ A MLEE D ++ G+ ++
Sbjct: 186 NEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEE 245
Query: 363 GMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
G IE A V ++++ G +PT + +++ GY +E A +++ +A
Sbjct: 246 GSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIA 295
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 4/164 (2%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
V DQ +G S + +I L KR A ++ E M +GL + + L
Sbjct: 499 VFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYC 558
Query: 116 KVRGLESAETYFNSLNDED-KVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
K ++ A ++ ++D + YG L+N + G +L L++ M+ G +
Sbjct: 559 KQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPK 618
Query: 174 NYNGIM-CLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINS 216
YN ++ L+ + + ++ +M E G PPD +Y+I S
Sbjct: 619 AYNPVIQSLFRRNNLRDAL-NLFREMTEVGEPPDALTYKIVFRS 661
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/363 (20%), Positives = 154/363 (42%), Gaps = 24/363 (6%)
Query: 120 LESAETYFNSLNDEDKVDKLY--GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNG 177
L SA + +S+ +Y L+ G ++E++ ++ M+ G +A+ YN
Sbjct: 133 LPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNT 192
Query: 178 IMCLYTNTGQHEKIPDVLLDMKENG-VPPDNFSYRICINSYGARSELSSMENVLQEMESQ 236
++ + G+ + V+ M+E G P+ ++ +N + V EM +
Sbjct: 193 LVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVRE 252
Query: 237 SHISMDWGTYSTVANYYIIAG-LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNK 295
++ D +Y+T+ + Y G L E ++ + + D + + LI GN
Sbjct: 253 G-LAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQR--GLVPDVVTFTSLIHATCKAGNL 309
Query: 296 DEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEW-----ELSCYCYDFR 350
++ + + + + + ++ K G L++A +EE + S CY
Sbjct: 310 EQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCY--- 366
Query: 351 VPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEA 410
N ++ GY + G ++ A +++E+ K P ++S I +GY N++ AF+ ++
Sbjct: 367 --NALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKM 424
Query: 411 LAVHEENKFWRPKPSLVSSILDWLGDNRDVEE-VEAFVSSLKIKVQKRNM-YHALTEAHI 468
L K P SS++ L + + + + E F + L++ VQ Y L + H
Sbjct: 425 L-----KKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHC 479
Query: 469 RSG 471
+ G
Sbjct: 480 KEG 482
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 161/381 (42%), Gaps = 35/381 (9%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
V D+ V EG + ++ +L V M+ +GL V +
Sbjct: 245 VFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATC 304
Query: 116 KVRGLESAETYFNSLNDED-KVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
K LE A + + +++++ + AL++ + ++G +D++L +++M++ G S +
Sbjct: 305 KAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVV 364
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
YN ++ Y G+ + +++ +M+ V PD +Y I+ Y L S + Q+M
Sbjct: 365 CYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKM 424
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDI-----VSKSKDALGYNHLISH 288
+ + D TYS+ +I GL E+ + CE + D Y LI
Sbjct: 425 LKKGVLP-DAITYSS-----LIRGLCEEKRLN-DACELFENMLQLGVQPDEFTYTTLIDG 477
Query: 289 YASLGNKDEMMKFWGLQKIKCKKQLNRDYIT---MLGSLVKIGELEEAEKML-------- 337
+ GN + K L +K + D +T ++ L K +EA ++L
Sbjct: 478 HCKEGNVE---KALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDP 534
Query: 338 -------EEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSII 390
+ L C +F+ +L G+ KG++++AD V + ++ + + +SI+
Sbjct: 535 VPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSIL 594
Query: 391 AAGYADKNNMEKAFECMKEAL 411
G+ N+ KA K+ L
Sbjct: 595 IHGHCRGGNVRKALSFHKQML 615
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 125/308 (40%), Gaps = 40/308 (12%)
Query: 140 YGALLNCYVRE---GLVDESLSLMQ--------------------------------KMK 164
Y +LL+CYVR+ G V E L +M+ +MK
Sbjct: 215 YNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMK 274
Query: 165 EMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELS 224
G Y ++ Y G + VL + NGV P+ +Y + IN + ++
Sbjct: 275 ANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQME 334
Query: 225 SMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNH 284
+ E +L +M+ Q + ++ ++T+ + Y G+ + A + +K + + D YN
Sbjct: 335 AAEMLLADMQGQG-VGLNQIIFNTMIDGYCRKGMVDDA-LKIKAAMEKMGVELDIYTYNT 392
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSC 344
L + DE + Y T++ K G++ EA ++ E
Sbjct: 393 LACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKG 452
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNME--- 401
N+++ GY++KG I +A+ KE+ KKG P +++ + G+ ++
Sbjct: 453 ATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVAL 512
Query: 402 KAFECMKE 409
K FE MK+
Sbjct: 513 KLFEEMKQ 520
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 108/255 (42%), Gaps = 37/255 (14%)
Query: 149 REGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNF 208
+ G VD++ L+ M G +AL YN ++ Y ++ ++L M+ G+
Sbjct: 189 KSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVG 248
Query: 209 SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKK 268
+Y I ++S ++S +E + EM++ + + D Y+ V N Y AG +A L +
Sbjct: 249 TYTILVDSLSTARDISKVEALFNEMKANNVVG-DVYLYTAVINAYCRAGNMRRAAKVLDE 307
Query: 269 CEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIG 328
C +GN E + R Y ++ KIG
Sbjct: 308 C----------------------VGNGVEPNE--------------RTYGVLINGFCKIG 331
Query: 329 ELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWS 388
++E AE +L + + + + N ++ GY +KGM++ A + + K G +++
Sbjct: 332 QMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYN 391
Query: 389 IIAAGYADKNNMEKA 403
+A G N +++A
Sbjct: 392 TLACGLCRVNRLDEA 406
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 73/165 (44%), Gaps = 6/165 (3%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L R +DE+ +L+ M EMG + + Y ++ ++ G + + +M
Sbjct: 390 YNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMA 449
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E G P +Y + I+ Y + + E +EME + + D TY+++ + + + G
Sbjct: 450 EKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVP-DVYTYASLVHGHCVNG-- 506
Query: 260 EKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFW 302
K + LK E++ + + + Y LIS A G + + +
Sbjct: 507 -KVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLY 550
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/258 (19%), Positives = 110/258 (42%), Gaps = 4/258 (1%)
Query: 85 FKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV--DKLYGA 142
+ A +V + G G+ + + V ++ K+ +E+AE + + ++
Sbjct: 298 MRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNT 357
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
+++ Y R+G+VD++L + M++MG YN + C + ++ +L M E G
Sbjct: 358 MIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMG 417
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
V P+ +Y I+ + ++ + +EM ++ + TY+ + + Y G +A
Sbjct: 418 VVPNYVTYTTLISIHCKDGDMVEARRLFREM-AEKGATPSVVTYNVMIDGYTKKGSIREA 476
Query: 263 IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLG 322
+ K+ E D Y L+ + G D +K + K + + Y ++
Sbjct: 477 ERFRKEMEK-KGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALIS 535
Query: 323 SLVKIGELEEAEKMLEEW 340
L K G E A ++ ++
Sbjct: 536 GLAKEGRSEAAFQLYDDM 553
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 170/394 (43%), Gaps = 52/394 (13%)
Query: 28 YRAVKP--VARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRF 85
+R +KP V N L + LG + + VL + + G K + + L +I+ L
Sbjct: 90 FRGIKPNLVNCNILINSFCQLGHIPSAFS-VLTKILKMGYKPNTITLNTLIKGL------ 142
Query: 86 KHALQVSEWMSGQGLAFSVHD-HAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYG--A 142
++G+ +HD H + +GK L+ A FN + E+ +Y
Sbjct: 143 --------CLNGK-----IHDKHCI----VGK---LKDAVDLFNKMILENINPDVYTFTI 182
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
L++ + +EG V E+ +++ M G + YN +M Y Q K + M + G
Sbjct: 183 LVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLG 242
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
V PD SY I IN + + +L+EM + I + TYS++ + +G A
Sbjct: 243 VSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIP-NVVTYSSLIDGLCKSGKISYA 301
Query: 263 IIYLKKCED------IVSKSK--DALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN 314
+ + + D IV+ S DAL NH + + +L + MK G+Q
Sbjct: 302 LKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQ---MKNQGIQPNM------ 352
Query: 315 RDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
Y ++ L + G+LE+A K+ E+ + + + +++ G+ KG+ ++A +L +
Sbjct: 353 YTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSK 412
Query: 375 IVKKGKTPTPNSWSIIAAGY--ADKNNMEKAFEC 406
+ G P ++ II D+N M + C
Sbjct: 413 MEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLC 446
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 137/342 (40%), Gaps = 65/342 (19%)
Query: 153 VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
VD+++SL ++ + + +N I+ + + + + M+ G+ P+ + I
Sbjct: 43 VDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 102
Query: 213 CINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDI 272
INS+ + S +VL ++ + M + + N +I GL I+ K C I
Sbjct: 103 LINSFCQLGHIPSAFSVLTKI-----LKMGYKPNTITLNT-LIKGLCLNGKIHDKHC--I 154
Query: 273 VSKSKDALG-YNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD---YITMLGSLVKIG 328
V K KDA+ +N +I + +N D + ++ K G
Sbjct: 155 VGKLKDAVDLFNKMIL-----------------------ENINPDVYTFTILVDGFCKEG 191
Query: 329 ELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWS 388
++EA+ +L + N ++ GY + KA ++ + + G +P S+S
Sbjct: 192 RVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYS 251
Query: 389 IIAAGYADKNNMEKAFECMKE----------------------------ALAVHEENKFW 420
I+ G+ M++A E +KE AL + +E
Sbjct: 252 ILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDR 311
Query: 421 RPKPSLV--SSILDWLGDNRDVEEVEAFVSSLKIKVQKRNMY 460
P++V SSILD L N V+ A ++ +K + + NMY
Sbjct: 312 GQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMY 353
>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 867
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 129/292 (44%), Gaps = 20/292 (6%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKM-KEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
+Y ++N + G ++ ++Q + KE +YN I+ + G + + +
Sbjct: 556 IYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYRE 615
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
M ENG+ P+ ++ IN + + + ++ EM+S+ + +D Y + + +
Sbjct: 616 MSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKD-LKLDVPAYGALIDGFCKKN 674
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR-- 315
+ A + ++ ++ YN+LIS + +LG D + + KK +N
Sbjct: 675 DMKTAYTLFSELLELGLMPNVSV-YNNLISGFRNLGKMDAAIDLY-------KKMVNDGI 726
Query: 316 -----DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADA 370
Y TM+ L+K G L A + E D + +++ G S+KG +A
Sbjct: 727 SCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYVVLVNGLSKKGQFVRASK 786
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA---VHEENKF 419
+L+E+ KK TP +S + AG+ + N+ +AF E L VH++ F
Sbjct: 787 MLEEMKKKDATPNVLIYSTVIAGHHREGNLNEAFRVHDEMLEKGLVHDDTIF 838
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/296 (18%), Positives = 129/296 (43%), Gaps = 11/296 (3%)
Query: 121 ESAETYFNSLNDEDKVDKLYGALLN----CYVREGLVDESLSLMQKMKEMGSFGSALNYN 176
ES E ND + +G + N ++G VD + S ++ M+ G + + YN
Sbjct: 429 ESPEAALEIFNDSFETWIAHGFMCNKIFLLLCKQGKVDAATSFLRMMENKGIEPNVVFYN 488
Query: 177 GIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQ 236
+M + + + +M E G+ P+NF+Y I I+ + + + V+ +M +
Sbjct: 489 NMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEVINQMIA- 547
Query: 237 SHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALG---YNHLISHYASLG 293
S+ + Y+T+ N G KA L ++++ + + ++G YN +I + G
Sbjct: 548 SNFEANEVIYNTIINGLCKVGQTSKAKEML---QNLIKEKRYSMGCTSYNSIIDGFFKEG 604
Query: 294 NKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPN 353
+ D ++ + + +++ K ++ A +M+ E + D
Sbjct: 605 DTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYG 664
Query: 354 IILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
++ G+ +K ++ A + E+++ G P + ++ + +G+ + M+ A + K+
Sbjct: 665 ALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKK 720
>gi|242048586|ref|XP_002462039.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
gi|241925416|gb|EER98560.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
Length = 798
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 115/267 (43%), Gaps = 6/267 (2%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L++ + G ++L L +M + G + + ++ N GQ ++ ++L M+
Sbjct: 212 YNVLMDGLCKRGTAVDALKLFDEMLQRGITPNVKTHTILLSSMCNAGQLKEAENLLNSME 271
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ G PPD +Y ++ + L+ + + YS + + +AG
Sbjct: 272 DKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGTFVLGLKGYSCLIDGLFLAGRY 331
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD--- 316
E+ + + S D + Y +I A G D+ F+ K +K+ D
Sbjct: 332 EEGFQCYMEVLEQADFSPDIVLYTIMIRGCAEAGRIDDAFAFFDEMK---EKRFTPDTFC 388
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y T+L +L G+L+ A ++ E + D I++ G +K ++++A V +V
Sbjct: 389 YNTLLKALCDSGDLDGARSLMSEMAQNNVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMV 448
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKA 403
+ G PT +++++ G + +E+A
Sbjct: 449 EVGCHPTVMTYNVLIDGLYRAHRLEEA 475
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 79/385 (20%), Positives = 147/385 (38%), Gaps = 111/385 (28%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE----DKVDKLYGAL 143
AL++ + M +G+ +V H + L + L+ AE NS+ D+ D+V Y A
Sbjct: 228 ALKLFDEMLQRGITPNVKTHTILLSSMCNAGQLKEAENLLNSMEDKGCPPDEVT--YNAF 285
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTN---TGQHEK---------- 190
L+ + G VDE++ ++ ++ G+F L G CL G++E+
Sbjct: 286 LSGLCKAGRVDEAIERLEALRRTGTF--VLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLE 343
Query: 191 ----IPDVLL----------------------DMKENGVPPDNFSYRICINSYGARSELS 224
PD++L +MKE PD F Y + + +L
Sbjct: 344 QADFSPDIVLYTIMIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDLD 403
Query: 225 SMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNH 284
+++ EM +Q+++ +D T++ +I GL +K ++
Sbjct: 404 GARSLMSEM-AQNNVVLDTNTHTI-----MIHGLCKKQLV-------------------- 437
Query: 285 LISHYASLGNKDEMMK-FWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELS 343
DE M+ F G+ ++ C + Y ++ L + LEEA + + E+
Sbjct: 438 -----------DEAMQVFDGMVEVGCHPTV-MTYNVLIDGLYRAHRLEEARMLFYKMEVG 485
Query: 344 CYCYDFRVPNIIL---LG----------------YSQKGMIEKADAVLKEIVKKGKTPTP 384
P++ L LG Q G + KA +L+ I+ G P
Sbjct: 486 ------NNPSLFLRLTLGANQVKDSESLQKLVDSMCQSGQVLKAYKLLRGIMDSGVVPDV 539
Query: 385 NSWSIIAAGYADKNNMEKAFECMKE 409
+++ + G N++ A +E
Sbjct: 540 VTYNTLLNGLCKVRNLDGALRLFRE 564
>gi|168011113|ref|XP_001758248.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690704|gb|EDQ77070.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 658
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 158/367 (43%), Gaps = 26/367 (7%)
Query: 128 NSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQ 187
+++ D + +D L + +E V+E++ L ++K++G + YN I+ +
Sbjct: 69 SAVCDSETIDLLSAIAITGLSKESRVEEAMLLFDQLKQLGVSPGPMAYNAIVGTCAREDR 128
Query: 188 HEKIPDVLLDMKENGVPPDNFSYRICINSYG-ARSELSSMENVLQEMESQSHISMDWGTY 246
E +++ M+ +G PDN +Y + + R + + V +E Q + MD Y
Sbjct: 129 LETALELMNQMRGSGFQPDNVNYTLVFQACAKKRVGVDVISRVCANIE-QEGLEMDTKLY 187
Query: 247 STVANYYIIAGLKEKAIIY--LKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGL 304
+ V N Y AG +KA Y L + D+V D Y+ LI + D+ +
Sbjct: 188 NDVINAYCRAGDPDKAFQYMGLMQACDLVP---DVRSYSSLIETLVVVRRLDDAEAAYAE 244
Query: 305 QKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWE-----LSCYCYDFRVPNIILLGY 359
K K K R +L + + LE+ EK++++ E LS + Y +++ Y
Sbjct: 245 MKSKSYKINLRTLNALLSAYTRKSLLEQVEKLMQDAEDAGLKLSTFSY-----GLLIDAY 299
Query: 360 SQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKF 419
S+ G +++A A + + +S + Y + + +K+ A +
Sbjct: 300 SRAGRLDQAKAAFHNMKVENVPANAFIYSRLMVAYRNARQWDGTIRLLKDMYASN----- 354
Query: 420 WRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNM--YHALTEAHIRSG--QEVD 475
+P + + ++D G + + + + + K ++ +++L EAH R+G E
Sbjct: 355 IKPNQFIFNILIDTYGKFGRLPQAMRTFAQMDKEGFKPDVVTWNSLIEAHCRAGLITEAL 414
Query: 476 GLLESMK 482
LL+ M+
Sbjct: 415 DLLKQMQ 421
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 111/255 (43%), Gaps = 32/255 (12%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
YG L++ Y R G +D++ + MK +A Y+ +M Y N Q + +L DM
Sbjct: 292 YGLLIDAYSRAGRLDQAKAAFHNMKVENVPANAFIYSRLMVAYRNARQWDGTIRLLKDMY 351
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ + P+ F + I I++YG L +M+ + D T++++ + AGL
Sbjct: 352 ASNIKPNQFIFNILIDTYGKFGRLPQAMRTFAQMDKEG-FKPDVVTWNSLIEAHCRAGLI 410
Query: 260 EKAIIYLKKCED--------IVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKK 311
+A+ LK+ ++ + +ALG+++ A L ++ M+F GL
Sbjct: 411 TEALDLLKQMQERECVPSLHTYNIILNALGWHNRWKEMALLLDE---MRFKGLDPNVVT- 466
Query: 312 QLNRDYITMLGSLVKIGELEEAEKMLEEWE-------LSCYCYDFRVPNIILLGYSQKGM 364
Y T++ S EA + L++ + S YC + Y+++G+
Sbjct: 467 -----YTTLVDSYGTSKRYREASEYLKQMKSQGLQPSTSVYC-------ALANSYAKRGL 514
Query: 365 IEKADAVLKEIVKKG 379
E+A V K + K G
Sbjct: 515 CEQAMEVFKSMEKDG 529
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 138/324 (42%), Gaps = 6/324 (1%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED-KVD-KLYGALLN 145
A Q M L V ++ ++ + VR L+ AE + + + K++ + ALL+
Sbjct: 203 AFQYMGLMQACDLVPDVRSYSSLIETLVVVRRLDDAEAAYAEMKSKSYKINLRTLNALLS 262
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
Y R+ L+++ LMQ ++ G S +Y ++ Y+ G+ ++ +MK VP
Sbjct: 263 AYTRKSLLEQVEKLMQDAEDAGLKLSTFSYGLLIDAYSRAGRLDQAKAAFHNMKVENVPA 322
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
+ F Y + +Y + +L++M + S+I + ++ + + Y G +A+
Sbjct: 323 NAFIYSRLMVAYRNARQWDGTIRLLKDMYA-SNIKPNQFIFNILIDTYGKFGRLPQAMRT 381
Query: 266 LKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWG-LQKIKCKKQLNRDYITMLGSL 324
+ D D + +N LI + G E + +Q+ +C L+ Y +L +L
Sbjct: 382 FAQM-DKEGFKPDVVTWNSLIEAHCRAGLITEALDLLKQMQERECVPSLH-TYNIILNAL 439
Query: 325 VKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTP 384
+E +L+E + ++ Y +A LK++ +G P+
Sbjct: 440 GWHNRWKEMALLLDEMRFKGLDPNVVTYTTLVDSYGTSKRYREASEYLKQMKSQGLQPST 499
Query: 385 NSWSIIAAGYADKNNMEKAFECMK 408
+ + +A YA + E+A E K
Sbjct: 500 SVYCALANSYAKRGLCEQAMEVFK 523
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 6/158 (3%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
+LD+ +G + + ++ + KR++ A + + M QGL S + +
Sbjct: 451 LLDEMRFKGLDPNVVTYTTLVDSYGTSKRYREASEYLKQMKSQGLQPSTSVYCALANSYA 510
Query: 116 KVRGL-ESAETYFNSLNDEDKVD---KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGS 171
K RGL E A F S+ ++D V+ + L+N + G E+ S+ + E+G
Sbjct: 511 K-RGLCEQAMEVFKSM-EKDGVELNLSMLNLLINAFGVAGKYVEAFSVFDYILEVGMSPD 568
Query: 172 ALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFS 209
+ Y +M Q +++PDV M G PD+ +
Sbjct: 569 VVTYTTLMKALIKAEQLDQVPDVYEQMVRAGCTPDDMA 606
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 113/252 (44%), Gaps = 18/252 (7%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
++ L++ Y + G + +++ +M + G + +N ++ + G + D+L M
Sbjct: 361 IFNILIDTYGKFGRLPQAMRTFAQMDKEGFKPDVVTWNSLIEAHCRAGLITEALDLLKQM 420
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
+E P +Y I +N+ G + M +L EM + + + TY+T+ + Y +
Sbjct: 421 QERECVPSLHTYNIILNALGWHNRWKEMALLLDEMRFKG-LDPNVVTYTTLVDSYGTSKR 479
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
+A YLK+ + + ++ Y L + YA G ++ M+ + K + +D +
Sbjct: 480 YREASEYLKQMKSQGLQPSTSV-YCALANSYAKRGLCEQAMEVF--------KSMEKDGV 530
Query: 319 TMLGSLVK--IGELEEAEKMLEEWELSCYCYDFRV-PNIILLGYSQKGMI-----EKADA 370
+ S++ I A K +E + + Y + + P+++ K +I ++
Sbjct: 531 ELNLSMLNLLINAFGVAGKYVEAFSVFDYILEVGMSPDVVTYTTLMKALIKAEQLDQVPD 590
Query: 371 VLKEIVKKGKTP 382
V +++V+ G TP
Sbjct: 591 VYEQMVRAGCTP 602
>gi|8920567|gb|AAF81289.1|AC027656_6 Contains similarity to a hypothetical protein F23N19.4 gi|6630464
from Arabidopsis thaliana BAC F23N19 gb|AC007190. It
contains a PPR repeat domain PF|01535 [Arabidopsis
thaliana]
Length = 797
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/391 (20%), Positives = 170/391 (43%), Gaps = 18/391 (4%)
Query: 105 HDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQK 162
H ++ +D + + + LE A + + +D + + ++++ Y + G VD + S
Sbjct: 201 HTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCT 260
Query: 163 MKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSE 222
+ + G S ++N ++ G + ++ DM ++GV PD+ +Y I +
Sbjct: 261 VLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGM 320
Query: 223 LSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS---KDA 279
+S V+++M + +S D TY+ + G + ++ LK D++S+
Sbjct: 321 ISGAWEVIRDMLDKG-LSPDVITYTILLCGQCQLGNIDMGLVLLK---DMLSRGFELNSI 376
Query: 280 LGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEE 339
+ + ++S G DE + + K Y ++ L K+G+ + A + +E
Sbjct: 377 IPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDE 436
Query: 340 WELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNN 399
+ R +LLG QKGM+ +A ++L ++ G+T ++I+ GYA
Sbjct: 437 MCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGC 496
Query: 400 MEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNM 459
+E+A E K + P + +S++ +++ E + +K+ ++
Sbjct: 497 IEEALELFKVVIETG-----ITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSV 551
Query: 460 --YHALTEAHIRSG--QEVDGLLESMKADDI 486
Y L +A+ G + +D L MKA+ I
Sbjct: 552 VSYTTLMDAYANCGNTKSIDELRREMKAEGI 582
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 79/189 (41%), Gaps = 31/189 (16%)
Query: 119 GLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGI 178
G+ + FNSL +YG Y + + E+ ++ +K G S ++Y +
Sbjct: 511 GITPSVATFNSL--------IYG-----YCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 557
Query: 179 MCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQE------ 232
M Y N G + I ++ +MK G+PP N +Y + + + +VL+E
Sbjct: 558 MDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKC 617
Query: 233 ------MESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDA--LGYNH 284
MES+ I D TY+T+ Y A ++L E + S++ DA YN
Sbjct: 618 KQGLRDMESEG-IPPDQITYNTIIQYLCRVKHLSGAFVFL---EIMKSRNLDASSATYNI 673
Query: 285 LISHYASLG 293
LI G
Sbjct: 674 LIDSLCVYG 682
>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 150/334 (44%), Gaps = 7/334 (2%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGK--VRGLESAETYFNSLNDEDKVDKL-YGALL 144
A++V + M GL ++ + +D GK V + E + L++ + D++ + +LL
Sbjct: 244 AIKVFDSMKSNGLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLL 303
Query: 145 NCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVP 204
R GL + + L M + G YN ++ GQ + +++ +M +
Sbjct: 304 AVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNIL 363
Query: 205 PDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAII 264
P+ +Y I+ Y L N+ EM+ + +D +Y+T+ + Y G E+A+
Sbjct: 364 PNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLG-VGLDRVSYNTLLSVYAKLGRFEQALD 422
Query: 265 YLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMK-FWGLQKIKCKKQLNRDYITMLGS 323
K+ E+ KD + YN L++ Y DE+ + F +++ + L Y T++
Sbjct: 423 VCKEMEN-AGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNL-LTYSTLIDV 480
Query: 324 LVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPT 383
K G +EA ++ E++ + D + + ++ + G++E + +L E+ K+G P
Sbjct: 481 YSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMTKEGIRPN 540
Query: 384 PNSWSIIAAGYADKNNMEKAFECMKEALAVHEEN 417
+++ I + + + + E A+ E+
Sbjct: 541 VVTYNSIIDAFGRSASAQCVVDDSGETTALQVES 574
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 133/332 (40%), Gaps = 53/332 (15%)
Query: 108 AVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYG--ALLNCYVREGLVDESLSLMQKMKE 165
+ + +G++ +E A+ F++ E +Y AL++ Y R G +E++ + MK
Sbjct: 194 SAMISTLGRLGKVELAKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKS 253
Query: 166 MGSFGSALNYNGIMCLYTNTG-QHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELS 224
G + + YN ++ G + +K+ ++ M NGV PD RI NS A
Sbjct: 254 NGLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPD----RITFNSLLAVCSRG 309
Query: 225 SMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNH 284
+ W A + + + +K I +D YN
Sbjct: 310 GL----------------WE-----AARRLFSAMVDKGI------------DQDIFTYNT 336
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNR--DYITMLGSLVKIGELEEAEKMLEEWEL 342
L+ G D + F + ++ K L Y TM+ K+G L++A M E +
Sbjct: 337 LLDAVCKGGQMD--LAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKF 394
Query: 343 SCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEK 402
D N +L Y++ G E+A V KE+ G +++ + AGY + +
Sbjct: 395 LGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYD- 453
Query: 403 AFECMKEALAVHEENKFWRPKPSLV--SSILD 432
E V EE K R P+L+ S+++D
Sbjct: 454 ------EVRRVFEEMKRGRVSPNLLTYSTLID 479
>gi|297821008|ref|XP_002878387.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324225|gb|EFH54646.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 766
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 108/213 (50%), Gaps = 12/213 (5%)
Query: 138 KLYGALLN--CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVL 195
K+Y AL++ C VR +++ +++K++E G L YN ++ L+ + EK+ ++L
Sbjct: 512 KIYYALISGLCQVRRD--HDAIRVVEKLREGGFSLDLLAYNMLIGLFCDKNNAEKVYEML 569
Query: 196 LDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYII 255
DM++ G+ PD+ +Y I+ +G + S+E ++++M + + TY V Y
Sbjct: 570 TDMEKEGMKPDSITYNTLISFFGKHKDFESVERMMEQMR-EDELDPTVATYGAVIEAYCS 628
Query: 256 AGLKEKAIIYLKKCEDIVSKSK---DALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQ 312
G +A LK +D+ +SK + + YN LI+ ++ LGN + + K+K +
Sbjct: 629 VGELGEA---LKLFKDMGLRSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRP 685
Query: 313 LNRDYITMLGSLVKIGELEEAEKMLEEW-ELSC 344
Y + L + + E K+++E E SC
Sbjct: 686 NVETYNALFKCLKEKNQAETLLKLMDEMVEQSC 718
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 125/280 (44%), Gaps = 14/280 (5%)
Query: 141 GALLNCYVREGLVDESLSLMQKM----KEMGSF--GSALNYNGIMCLYTNTGQHEKIPDV 194
G L+N + VDE+L + ++M + G+ ++++N ++ G+ ++ ++
Sbjct: 333 GILINTLCKSRRVDEALQVFEQMCGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEEL 392
Query: 195 LLDMK-ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYY 253
L+ MK E P+ +Y I+ Y +L + + V+ M+ + I D T +T+
Sbjct: 393 LVRMKMEERCVPNTVTYNCLIDGYCRAGKLETAKEVVSRMK-EDGIKPDVVTVNTIVGGM 451
Query: 254 IIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMK-FWGLQKIKCKKQ 312
A+++ E K + + Y LI SL N ++ M F + + C
Sbjct: 452 CRHHGLNMAVLFFMDMEKEGVKG-NVVTYMTLIHACCSLSNIEKAMHWFDKMLEAGCSPD 510
Query: 313 LNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
+ Y ++ L ++ +A +++E+ + D N+++ + K EK +L
Sbjct: 511 -AKIYYALISGLCQVRRDHDAIRVVEKLREGGFSLDLLAYNMLIGLFCDKNNAEKVYEML 569
Query: 373 KEIVKKGKTPTPNSWSIIAAGYA---DKNNMEKAFECMKE 409
++ K+G P +++ + + + D ++E+ E M+E
Sbjct: 570 TDMEKEGMKPDSITYNTLISFFGKHKDFESVERMMEQMRE 609
>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Vitis vinifera]
Length = 644
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 165/395 (41%), Gaps = 26/395 (6%)
Query: 62 LEGQKISELELQRVIRQLRS-------RKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLI 114
L G+ + E + +R +R S F AL+ E G G ++ + + +L+
Sbjct: 121 LFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYE--CGVGGKTNISPNVLSFNLV 178
Query: 115 GKVR---GL--ESAETYFNSLNDEDKVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGS 168
K GL + E + + + D Y L++ +E +DE++ L+ +M+ G
Sbjct: 179 IKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGC 238
Query: 169 FGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMEN 228
F S++ +N ++ G ++ ++ +M G P+ +Y IN + +L +
Sbjct: 239 FPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVS 298
Query: 229 VLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISH 288
+L M + + D TY T+ N + G + L E+ + Y+ LIS
Sbjct: 299 LLDRMVASKCVPNDV-TYGTLINGLVKQGRSVDGVHLLSSLEE-RGHHANEYAYSTLISG 356
Query: 289 YASLGNKDEMMKFW-GLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEW-ELSCYC 346
+E M W + + C+ + Y ++ L + G+L+EA+++L E C
Sbjct: 357 LFKEEKSEEAMGLWKKMVEKGCQPNI-VVYSALIDGLCREGKLDEAKEILCEMVNKGCTP 415
Query: 347 YDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFEC 406
F ++I G+ + G +KA V KE+ K P +S++ G + + +A
Sbjct: 416 NAFTYSSLI-KGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAM-- 472
Query: 407 MKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVE 441
+ H + RP SS++ L + VE
Sbjct: 473 ---MMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVE 504
>gi|413917168|gb|AFW57100.1| hypothetical protein ZEAMMB73_992270 [Zea mays]
Length = 442
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 129/305 (42%), Gaps = 12/305 (3%)
Query: 111 LDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKM-KEMG 167
+D+ + AET L V + Y ++ Y++ + ++ S++ +M K+
Sbjct: 96 IDVFSTMERFADAETILLELKASASVLDMIAYSVIVRMYIKARRLKDACSVLAEMEKQKE 155
Query: 168 SFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSME 227
+ ++ Y G EK+ D ++++ V D Y IN G + +
Sbjct: 156 IIPDKYLFLDMLRTYQKCGLLEKLADTYYWIRKSQVKCDEAMYNCIINCCGRAIPVDELS 215
Query: 228 NVLQEMESQSHISMDWGTYSTVANYYIIAGL---KEKAIIYLKKCEDIVSKSKDALGYNH 284
+ EM Q H++ + T++ + + Y AGL EK I +K D + YN
Sbjct: 216 RIFDEMLQQGHLA-NTVTFNVLLDIYGKAGLFNRAEKVFIMARK-----QGLADIISYNT 269
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSC 344
+I+ YA GN M F + + Y ML + K G LEE +L++ + +
Sbjct: 270 IIAAYAKGGNFLSMNYFVQMMQDAGFPVSLEAYNCMLDAYGKAGRLEEFASVLQKMKRAK 329
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
+D NI++ Y ++G I+ VL E+ +G P S++ + Y E A
Sbjct: 330 CKFDHYTYNIMINIYGRRGWIQDVSNVLAELKDRGVEPDLYSYNTLIKAYGIARMPEDAV 389
Query: 405 ECMKE 409
+ M+E
Sbjct: 390 KLMQE 394
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 4/216 (1%)
Query: 90 QVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL-YGALLNCYV 148
++ + M QG + V LD+ GK AE F + D + Y ++ Y
Sbjct: 216 RIFDEMLQQGHLANTVTFNVLLDIYGKAGLFNRAEKVFIMARKQGLADIISYNTIIAAYA 275
Query: 149 REGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNF 208
+ G +Q M++ G S YN ++ Y G+ E+ VL MK D++
Sbjct: 276 KGGNFLSMNYFVQMMQDAGFPVSLEAYNCMLDAYGKAGRLEEFASVLQKMKRAKCKFDHY 335
Query: 209 SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKK 268
+Y I IN YG R + + NVL E++ + + D +Y+T+ Y IA + E A+ +++
Sbjct: 336 TYNIMINIYGRRGWIQDVSNVLAELKDRG-VEPDLYSYNTLIKAYGIARMPEDAVKLMQE 394
Query: 269 CEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGL 304
+ S D + Y +LI+ N E +K W L
Sbjct: 395 MR-VKGISPDRVTYANLIAALQRNENFLEAVK-WSL 428
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/371 (20%), Positives = 146/371 (39%), Gaps = 39/371 (10%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I L R AL + M +G +VH + V +D + K ++ A + ++++
Sbjct: 305 LIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKG 364
Query: 135 KVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+ + Y AL++ Y +EG++D++ ++ M+ + YN ++C + K
Sbjct: 365 LIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAM 424
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
+L M E + P +Y I+ ++L S +L M + W TYS +
Sbjct: 425 ALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQW-TYSVFIDT 483
Query: 253 YIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFW---------- 302
G E+A + K+ + + Y LI Y +G D
Sbjct: 484 LCKEGRVEEAGTLFDSVKAKGVKANEVI-YTALIDGYCKVGKIDVAYSLLERMLNDACLP 542
Query: 303 ----------GLQKIKCKKQLNR---------------DYITMLGSLVKIGELEEAEKML 337
GL K K K+ + Y ++G ++K G + A K+
Sbjct: 543 NSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVF 602
Query: 338 EEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADK 397
Y D L Y +GM+E+ D V+ ++ ++G P +++++ GYA
Sbjct: 603 NHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARL 662
Query: 398 NNMEKAFECMK 408
+AF+ +K
Sbjct: 663 GLTHRAFDFLK 673
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 116/292 (39%), Gaps = 43/292 (14%)
Query: 116 KVRGLESAETYFNSLNDEDKVDK--LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
KV LESA + +N+ V Y ++ +EG V+E+ +L +K G + +
Sbjct: 451 KVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEV 510
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
Y ++ Y G+ + +L M + P++++Y + I ++ +++ +M
Sbjct: 511 IYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKM 570
Query: 234 ESQSHISMDWGTYSTVANYYIIAG--LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYAS 291
+ G TV Y I+ G LK+ A + K +NH++S
Sbjct: 571 -------LTMGVKPTVVTYTILIGEMLKDGAFDHALKV------------FNHMVS---- 607
Query: 292 LGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRV 351
G Q C Y L + G LEE + ++ + D
Sbjct: 608 ----------LGYQPDVCT------YTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVT 651
Query: 352 PNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
+++ GY++ G+ +A LK +V G P+ SI+ + +N M++
Sbjct: 652 YTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKET 703
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 80/394 (20%), Positives = 160/394 (40%), Gaps = 56/394 (14%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L++ G ++E+L L M E + Y ++ + +G+ + ++ +MK
Sbjct: 267 YTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMK 326
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E G P+ +Y + I+ +++ +L EM + I TY+ + + Y G+
Sbjct: 327 EKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIP-SVVTYNALIDGYCKEGMI 385
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
+ A L E S + YN LI L K ++ K L +++L+ IT
Sbjct: 386 DDAFEILDLMES-NSCGPNTRTYNELI---CGLCKKRKVHKAMALLNKMLERKLSPSLIT 441
Query: 320 ---MLGSLVKIGELEEAEKML----------EEWELSCY----CYDFRVP---------- 352
++ K+ +LE A ++L ++W S + C + RV
Sbjct: 442 YNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVK 501
Query: 353 -----------NIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNME 401
++ GY + G I+ A ++L+ ++ P +++++ G + M+
Sbjct: 502 AKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMK 561
Query: 402 KAFECMKEALAVHEENKFWRPKPSLVS-SIL--DWLGDNRDVEEVEAFVSSLKIKVQKR- 457
+A + + L + KP++V+ +IL + L D ++ F + + Q
Sbjct: 562 EASSLVAKMLTM-------GVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDV 614
Query: 458 NMYHALTEAHIRSG--QEVDGLLESMKADDIDED 489
Y A A+ G +EVD ++ M + I D
Sbjct: 615 CTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPD 648
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 76/176 (43%), Gaps = 7/176 (3%)
Query: 237 SHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS--KDALGYNHLI-SHYASLG 293
+ IS + T++ + N Y G +A +Y K IV D Y LI H + G
Sbjct: 188 NQISPNIYTFNAMVNGYCKIGNVVEAELYASK---IVQAGLHPDTFTYTSLILGHCRNKG 244
Query: 294 NKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPN 353
+ F + + C++ Y ++ L + G + EA K+ + C R
Sbjct: 245 VDNAYEVFLIMPQKGCQRN-EVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYT 303
Query: 354 IILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
+++ S G +A + E+ +KG P ++++++ G +N M++A + + E
Sbjct: 304 VLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSE 359
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 59/301 (19%), Positives = 109/301 (36%), Gaps = 43/301 (14%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+ +++G D +L + M +G Y + Y + G E++ DV+ M
Sbjct: 582 YTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMN 641
Query: 200 ENGVPPDNFSYRICINSY-------------------GARSELS---------SMENVLQ 231
E G+ PD +Y + I+ Y G + L S EN ++
Sbjct: 642 EEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMK 701
Query: 232 EMESQSHI-------SMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNH 284
E S+ I S+D Y I L EK + + + D Y
Sbjct: 702 ETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEH--------GCTIDVSIYGA 753
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSC 344
LI+ + +E K + Y ++L K+G EA ++++ +
Sbjct: 754 LIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENG 813
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
+++ G +G EKA AV ++ G +W ++ G ++ +++
Sbjct: 814 LLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECS 873
Query: 405 E 405
E
Sbjct: 874 E 874
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/336 (19%), Positives = 141/336 (41%), Gaps = 12/336 (3%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I L + AL + +M +G++ + + + + K + A N + +
Sbjct: 239 LIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLN 298
Query: 135 KVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM---CLYTNTGQHE 189
+ + + L++ + +EG V E+L +++ M EMG + + Y+ +M L+T+ +
Sbjct: 299 IMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEAR 358
Query: 190 KIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTV 249
K+ V++ G P+ FSY I IN Y + + EM Q + + +
Sbjct: 359 KLFHVMI---TKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLI 415
Query: 250 ANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMK-FWGLQKIK 308
+ + L+E ++ C + D Y+ L+ + G + + F +Q
Sbjct: 416 HGFCQLGKLREAQDLFRNMCTN--GNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTY 473
Query: 309 CKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKA 368
K L Y ++ ++ K G ++A K+ E + ++ I+ G ++G++++A
Sbjct: 474 LKPNLVM-YTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEA 532
Query: 369 DAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
+ + G P S+++I G + +A
Sbjct: 533 LEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRAL 568
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 73/399 (18%), Positives = 165/399 (41%), Gaps = 20/399 (5%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
VL + + G + + + +I L F A+++ + M +G V+ + ++ +
Sbjct: 150 VLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLC 209
Query: 116 KVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
K+ +A + + + Y L++ R+ LV+E+L + MK G
Sbjct: 210 KIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIF 269
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
Y ++ + ++ +L +M + PD ++ + ++++ ++S VL+ M
Sbjct: 270 TYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTM 329
Query: 234 ESQSHISMDWGTYSTVANYY-----IIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISH 288
++ + + TYS++ Y ++ K ++ K C+ + YN LI+
Sbjct: 330 -TEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCK------PNIFSYNILING 382
Query: 289 YASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYD 348
Y DE M+ + + N Y T++ ++G+L EA+ + + D
Sbjct: 383 YCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPD 442
Query: 349 FRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMK 408
+I+L G+ ++G + KA + + + P ++I+ N + A +
Sbjct: 443 LFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFS 502
Query: 409 EALAVHEENKFWRPKPSLVSSILDWLGDNRDVEE-VEAF 446
E + +P L ++I++ L ++E +EAF
Sbjct: 503 ELFV-----QGLQPHVQLYTTIINGLCKEGLLDEALEAF 536
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/253 (19%), Positives = 100/253 (39%), Gaps = 37/253 (14%)
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
+NC+ + VD S++ K+ ++G + + + ++ G+ + ++ DM G
Sbjct: 134 FMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKG 193
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
PD ++Y IN E ++ +L++ME AG +
Sbjct: 194 CQPDVYTYNTIINGLCKIGETAAAAGLLKKMEE--------------------AGCQPNM 233
Query: 263 IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLG 322
+ Y S D+L + L+ +E + + K K Y +++
Sbjct: 234 VTY--------STLIDSLCRDRLV---------NEALDIFSYMKAKGISPDIFTYTSLIQ 276
Query: 323 SLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTP 382
L K +EA +L E D N+++ + ++G + +A VLK + + G P
Sbjct: 277 GLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEP 336
Query: 383 TPNSWSIIAAGYA 395
++S + GY+
Sbjct: 337 NVVTYSSLMYGYS 349
>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 789
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/302 (18%), Positives = 138/302 (45%), Gaps = 20/302 (6%)
Query: 153 VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
++++L +++M+ G + YN ++ Y + + E +++ + G PPD SY
Sbjct: 282 LEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYT 341
Query: 213 CINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDI 272
+ ++ ++ ++++M S++ D TY+T+ + G + A+ +LK+ ED
Sbjct: 342 VMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAED- 400
Query: 273 VSKSKDALGYNHLISHYASLGNKDEMMKF-WGLQKIKCKKQLNRDYITMLGSLVKIGELE 331
D +GY+ ++ + G DE + C + Y ++ ++G ++
Sbjct: 401 KGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDV-VTYTAIVDGFCRLGRID 459
Query: 332 EAEKMLEE-WELSCYCYDFRVPNIILLGYSQKGMIEKADAV-LKEIVKKGK----TPTPN 385
EA+KML++ ++ C PN + G+ ++ +E++ + TP
Sbjct: 460 EAKKMLQQMYKHGCK------PNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAI 513
Query: 386 SWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEA 445
++ ++ G+ + + +A + +E + E F+ P P ++ ++ L N+ V E +
Sbjct: 514 TYGVVMHGFRREGKLSEACDLTREMV----EKGFF-PTPVEINLLIQSLCQNQKVVEAKK 568
Query: 446 FV 447
++
Sbjct: 569 YL 570
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/360 (20%), Positives = 152/360 (42%), Gaps = 45/360 (12%)
Query: 133 EDK---VDKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQH 188
EDK +DK+ Y A+++ + ++G +DE+ SL+ M + Y I+ + G+
Sbjct: 399 EDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRI 458
Query: 189 EKIPDVLLDMKENGVPPDNFSYRICINSY---GARSELSSMENVLQEMESQSHISMDWGT 245
++ +L M ++G P+ SY +N G E M NV +E W T
Sbjct: 459 DEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEE---------HWWT 509
Query: 246 YSTVANYYIIAGLKEKAIIYLKKCE---DIVSKS--KDALGYNHLISHYASLGNKDEMMK 300
+ + ++ G + + + + C+ ++V K + N LI E K
Sbjct: 510 PNAITYGVVMHGFRREGKLS-EACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKK 568
Query: 301 FWGLQKIKCKKQLNR-------DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPN 353
+ ++ LN+ ++ T++ +IG++E A +LE+ LS D
Sbjct: 569 YL-------EECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYT 621
Query: 354 IILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAV 413
+ +KG +++A ++ +++ KG PTP ++ + Y ++ + +
Sbjct: 622 ALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVK- 680
Query: 414 HEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQK--RNMYHALTEAHIRSG 471
+P ++ + +++ L D ++EE E + + K N H L E+ ++ G
Sbjct: 681 ------RKPFRTIYNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLMESCLKKG 734
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 115/249 (46%), Gaps = 16/249 (6%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDV---LL 196
YG +++ + REG + E+ L ++M E G F + + N L + Q++K+ + L
Sbjct: 515 YGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEIN---LLIQSLCQNQKVVEAKKYLE 571
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
+ G + ++ I+ + ++ + +VL++M S+ D TY+ + +
Sbjct: 572 ECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDM-YLSNKHPDAVTYTALFDALGKK 630
Query: 257 G-LKEKAIIYLKKCEDIVSKSKDA--LGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQL 313
G L E A + +K ++SK D + + +I Y G D+M+ L ++ +K
Sbjct: 631 GRLDEAAELIVK----MLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNL--LDRMVKRKPF 684
Query: 314 NRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
Y ++ L G LEEAEK+L + + D ++++ +KG+ A V
Sbjct: 685 RTIYNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLMESCLKKGVALSAYKVAC 744
Query: 374 EIVKKGKTP 382
++ ++ TP
Sbjct: 745 QMFRRNLTP 753
Score = 41.6 bits (96), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 54/298 (18%), Positives = 126/298 (42%), Gaps = 19/298 (6%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L++ + G D++L+ +++ ++ G + Y+ I+ + G+ ++ +++DM
Sbjct: 375 YNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMY 434
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG-- 257
PD +Y ++ + + + +LQ+M + +Y+ + N +G
Sbjct: 435 SRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHG-CKPNTVSYTALLNGLCHSGKS 493
Query: 258 LKEKAIIYLKKCEDIVSK----SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQL 313
L+ + +I VS+ + +A+ Y ++ + G E K
Sbjct: 494 LEAREMIN-------VSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPT 546
Query: 314 NRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
+ ++ SL + ++ EA+K LEE + ++ G+ Q G +E A +VL+
Sbjct: 547 PVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLE 606
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSIL 431
++ K P +++ + K +++A E + + L+ K P P S++
Sbjct: 607 DMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLS-----KGLDPTPVTFRSVI 659
>gi|297733858|emb|CBI15105.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 142/352 (40%), Gaps = 39/352 (11%)
Query: 95 MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGL 152
M+ G+ + ++ ++ GK+ LE + + Y LL + + G
Sbjct: 36 MNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGS 95
Query: 153 VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
+ E++ + ++M+ G +A Y+ ++ LY G+++ + D+ L+MK + P+ +Y I
Sbjct: 96 IKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNI 155
Query: 213 CINSYGARSELSSM---------ENVLQEMESQSHISMDWG------------------- 244
IN +G + ENV ME+ + G
Sbjct: 156 LINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKG 215
Query: 245 ------TYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEM 298
Y+ V Y A L E+A++ ++ SK YN LI +A G E
Sbjct: 216 VVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPT-VETYNSLIQMFAKGGLYKES 274
Query: 299 MKFWGLQKIKCKKQLNRD-YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL 357
L+ + NRD + ++ + + G+ EEA K E E + D + +L
Sbjct: 275 EAIL-LKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLS 333
Query: 358 GYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
Y G++E+++ EI G P+ + ++ A YA + + A + + E
Sbjct: 334 VYCFAGLVEESEEQFGEIKALGILPSVMCYCMMLAVYAKADRWDDAHQLLDE 385
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 138/374 (36%), Gaps = 83/374 (22%)
Query: 86 KHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYF--NSLNDEDKVDKLYGAL 143
K A+ V M G G + +++ L+L G+ + F +++ + Y L
Sbjct: 97 KEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNIL 156
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
+N + G E ++L M E + Y G++ G HE +LL M E GV
Sbjct: 157 INVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGV 216
Query: 204 PPDNFSYRICINSYGARS---ELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL-K 259
P + +Y I +YG + E N + E+ S+ + TY+++ + GL K
Sbjct: 217 VPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVE----TYNSLIQMFAKGGLYK 272
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMK-FWGLQKIKC--------- 309
E I LK + V++++D +N +I + G +E +K + ++K +C
Sbjct: 273 ESEAILLKMGQSGVARNRDT--FNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEA 330
Query: 310 --------------KKQLNRD-----------YITMLGSLVKIGELEEAEKMLEE----- 339
++Q Y ML K ++A ++L+E
Sbjct: 331 VLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCMMLAVYAKADRWDDAHQLLDEMFTNR 390
Query: 340 ---------------------WELSCYCYD----------FRVPNIILLGYSQKGMIEKA 368
W++ Y ++ R N +L G E+A
Sbjct: 391 VSNIHQVIGQMIRGDYDDDSNWQMVEYVFEKLKSEGCSLGVRFYNTLLEALWWLGQKERA 450
Query: 369 DAVLKEIVKKGKTP 382
VL E K+G P
Sbjct: 451 TRVLNEATKRGLFP 464
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/339 (19%), Positives = 134/339 (39%), Gaps = 52/339 (15%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y LL+ R GL DE+ + + M E G Y+ ++ + + EK+ ++L +M+
Sbjct: 13 YNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEME 72
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G PD SY + + ++ + V ++M+ + + TYS + N Y G
Sbjct: 73 SGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVP-NAATYSILLNLYGRHGRY 131
Query: 260 EKAI-IYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
+ ++L+ + + +A YN LI+ + G E+ +
Sbjct: 132 DDVRDLFLEM--KVSNTEPNAATYNILINVFGEGGYFKEV-------------------V 170
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
T+ +V+ E E +E +E ++ + G+ E A +L + +K
Sbjct: 171 TLFHDMVE----ENVEPNMETYEG------------LIFACGKGGLHEDAKKILLHMNEK 214
Query: 379 GKTPTPNSWSIIAAGYADKNNMEK---AFECMKEALAVHEENKFWRPKPSLVSSILDWLG 435
G P+ +++ + Y E+ AF M E + +P +S++
Sbjct: 215 GVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGS--------KPTVETYNSLIQMFA 266
Query: 436 DNRDVEEVEAFVSSLKIK--VQKRNMYHALTEAHIRSGQ 472
+E EA + + + R+ ++ + EA + GQ
Sbjct: 267 KGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQ 305
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 134/309 (43%), Gaps = 55/309 (17%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM---CLYTNTGQHEKIPDVLL 196
+ ++N + G ++++ +M+ MK G + ++YN ++ C G+ K VL
Sbjct: 226 FNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLK 285
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN----- 251
+M EN V P+ ++ I I+ + L V +EM Q + + +Y+++ N
Sbjct: 286 EMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQD-VKPNVISYNSLINGLCNG 344
Query: 252 -----------YYIIAGLKEKAIIYLKK----CE-DIVSKSKDALG-------------Y 282
+ AG++ I Y C+ D++ ++ D G Y
Sbjct: 345 GKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMY 404
Query: 283 NHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD--------YITMLGSLVKIGELEEAE 334
N LI Y LG D+ K+++ R+ Y ++ L + G +E A+
Sbjct: 405 NMLIDAYCKLGKIDDGFAL--------KEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAK 456
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGY 394
K+ ++ S D +I++ GY +KG KA +LKE+ K G P +++I+ GY
Sbjct: 457 KLFDQLT-SKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGY 515
Query: 395 ADKNNMEKA 403
+ N++ A
Sbjct: 516 CKEGNLKAA 524
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 121/268 (45%), Gaps = 22/268 (8%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +L+N G + E++S+ KM G + + YN ++ + ++ D+ +K
Sbjct: 334 YNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVK 393
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G P Y + I++Y ++ + +EME + I D GTY+ +IAGL
Sbjct: 394 GQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREG-IVPDVGTYNC-----LIAGLC 447
Query: 260 EKAIIYLKK--CEDIVSKS-KDALGYNHLISHYASLG-NKDEMMKFWGLQKIKCKKQLNR 315
I K + + SK D + ++ L+ Y G ++ M + K+ K + +
Sbjct: 448 RNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPR-HL 506
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWE------LSCYCYDFRVPNIILLGYSQKGMIEKAD 369
Y ++ K G L+ A M + E ++ Y N++L GYSQKG +E A+
Sbjct: 507 TYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASY-----NVLLQGYSQKGKLEDAN 561
Query: 370 AVLKEIVKKGKTPTPNSWSIIAAGYADK 397
+L E+++KG P ++ I+ D+
Sbjct: 562 MLLNEMLEKGLVPNRITYEIVKEEMVDQ 589
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 111/276 (40%), Gaps = 39/276 (14%)
Query: 171 SALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSY---GARSELSSME 227
+ +N ++ TG+ K DV+ DMK G P+ SY I+ Y G ++ +
Sbjct: 222 NVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKAD 281
Query: 228 NVLQEMESQSHISMDWGTYSTVANYY----------------IIAGLKEKAIIY------ 265
VL+EM ++ +S + T++ + + + + +K I Y
Sbjct: 282 AVLKEM-VENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLING 340
Query: 266 ----LKKCEDIVSKSK--------DALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQL 313
K E I + K + + YN LI+ + E + +G K +
Sbjct: 341 LCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPT 400
Query: 314 NRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
R Y ++ + K+G++++ + EE E D N ++ G + G IE A +
Sbjct: 401 TRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFD 460
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
++ KG P ++ I+ GY K KA +KE
Sbjct: 461 QLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKE 495
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 86/211 (40%), Gaps = 3/211 (1%)
Query: 58 DQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKV 117
D+ V G + + + +I K AL + + GQG + + + +D K+
Sbjct: 355 DKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKL 414
Query: 118 RGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNY 175
++ + E V + Y L+ R G ++ + L ++ G + +
Sbjct: 415 GKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTF 473
Query: 176 NGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMES 235
+ +M Y G+ K +L +M + G+ P + +Y I + Y L + N+ +ME
Sbjct: 474 HILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEK 533
Query: 236 QSHISMDWGTYSTVANYYIIAGLKEKAIIYL 266
+ + M+ +Y+ + Y G E A + L
Sbjct: 534 ERRLRMNVASYNVLLQGYSQKGKLEDANMLL 564
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 95/208 (45%), Gaps = 37/208 (17%)
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQ---KGMIEKADAVLKEI 375
++ +L K G++ +A ++E+ ++ + N ++ GY + G + KADAVLKE+
Sbjct: 228 VVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEM 287
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL------------------------ 411
V+ +P +++I+ G+ +N+ + + KE L
Sbjct: 288 VENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKI 347
Query: 412 --AVHEENKFWRP--KPSLVS--SILDWLGDNRDVEEVEAFVSSLKIK--VQKRNMYHAL 463
A+ +K +P+L++ ++++ N ++E S+K + V MY+ L
Sbjct: 348 SEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNML 407
Query: 464 TEAHIRSGQEVDG--LLESMKADDIDED 489
+A+ + G+ DG L E M+ + I D
Sbjct: 408 IDAYCKLGKIDDGFALKEEMEREGIVPD 435
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 147/331 (44%), Gaps = 23/331 (6%)
Query: 86 KHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE--DKVDKLYGAL 143
K A + + MS + + + H + + + K +E+AE + + D ++
Sbjct: 339 KRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTT 398
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
++ Y R G +DE+L L M++ G YN + ++++ +L M E GV
Sbjct: 399 MDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGV 458
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAI 263
P+ ++ + I Y L+ E + ++ME + + + TY+T+ + Y KEK
Sbjct: 459 KPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVP-NIITYNTLIDAYC---KKEKVK 514
Query: 264 IYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITML 321
K ++++K D Y+ LI +G DE +K + ++K + Y +M+
Sbjct: 515 QAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMI 574
Query: 322 GSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGY----SQKGM-IEKA---DAVLK 373
L K G +EA K+ +E D RV ++ + + G+ I+KA D+VL+
Sbjct: 575 SGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLVGSFHKPLTHAGLDIQKASDSDSVLR 634
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
+W +I+A + ++N+ + F
Sbjct: 635 R-------ENCCTWPLISAEHDGQDNIRERF 658
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 122/269 (45%), Gaps = 14/269 (5%)
Query: 145 NCYV------REGLVDESLSLMQKMKEMGSFGSAL-NYNGIMCLYTNTGQHEKIPDVLLD 197
+C+V R G VD + +M E F + + ++ + G+ EK +++ +
Sbjct: 182 SCFVLLLALKRCGEVDFCVRFFHRMVESNKFEIRVQSLTLVIDVLCRRGEVEKAKELMDE 241
Query: 198 MKENG-VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
M G V P+ F+Y +N+Y R + ++ +L+ ME + + TYS + +Y +
Sbjct: 242 MVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKE-QVVFSVATYSILIQWYSSS 300
Query: 257 GLKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN 314
G E+A K E++ K+ D Y+ +IS LGN + +
Sbjct: 301 GDIEEA---EKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNA 357
Query: 315 RDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
Y ++G + K G++E AE +L E + + + N + GY ++G +++A +
Sbjct: 358 HTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAI 417
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
+ KKG +++I+A G + ++A
Sbjct: 418 MEKKGINADVFTYNILANGLCKLHRYDEA 446
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 153/351 (43%), Gaps = 27/351 (7%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEM-GSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
Y L+ + G + ++ L+++M++ G + YN + +G+ + +V+ +M
Sbjct: 21 YFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNM 80
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
K+ PD ++ I L + VL EME +S + + TY+T+ N AG
Sbjct: 81 KDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEME-RSGFAANLVTYNTLINGLSSAGR 139
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
+A++ ++ ++ + D YN +I + G D F L+++K + + D
Sbjct: 140 SGEAVLVMQG----MTTTPDTQTYNAIIHGFCKSGEIDRAYGF--LEEMKQRAGCSPDTF 193
Query: 319 T---MLGSLVKIGELEEAEKMLEEW--ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
T ++ L K L +A+++L+E C C N ++ GY + +++A +L
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDC-CASVVAFNTLVDGYCKAQDLDRARELLS 252
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDW 433
+++ G P ++S I G +++K F A+ E+ KP +V+ +
Sbjct: 253 SMLEHGCAPDVVTYSTIIDGLCRCGDVDKGF-------ALLEKMVSRGCKPDVVTYTVLV 305
Query: 434 LGDNRDVEEVEAFVSSLKIKVQKRNMYHALTEAHIRSGQEVDGLLESMKAD 484
G + + VEA ++ KR + T + DGL + K D
Sbjct: 306 TGLCKAGKMVEA------CRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLD 350
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 100/209 (47%), Gaps = 7/209 (3%)
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
DN++Y + + ++ EL + ++L+EME Q ++ Y+ + +G +A+
Sbjct: 17 DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76
Query: 266 LKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWG-LQKIKCKKQLNRDYITMLGSL 324
+K +D K D + +N LI+ G DE + +++ L Y T++ L
Sbjct: 77 VKNMKDGACKP-DVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANL-VTYNTLINGL 134
Query: 325 VKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK-GKTPT 383
G EA +++ + D + N I+ G+ + G I++A L+E+ ++ G +P
Sbjct: 135 SSAGRSGEAVLVMQGMTTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPD 191
Query: 384 PNSWSIIAAGYADKNNMEKAFECMKEALA 412
++SI+ G +N+ KA E ++E +
Sbjct: 192 TFTYSILINGLCKSSNLRKADELLQEMIG 220
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/265 (18%), Positives = 116/265 (43%), Gaps = 5/265 (1%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ L+ + G +DE+ ++ +M+ G + + YN ++ ++ G+ + +L M+
Sbjct: 92 FNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRS---GEAVLVMQ 148
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
PD +Y I+ + E+ L+EM+ ++ S D TYS + N +
Sbjct: 149 GMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNL 208
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFW-GLQKIKCKKQLNRDYI 318
KA L++ + +N L+ Y + D + + + C + Y
Sbjct: 209 RKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDV-VTYS 267
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
T++ L + G++++ +LE+ D +++ G + G + +A ++K +++
Sbjct: 268 TIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLED 327
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKA 403
G TP ++S++ G + ++ A
Sbjct: 328 GCTPNAVTYSLVFDGLCKIDKLDMA 352
>gi|15225055|ref|NP_181456.1| lateral organ junction protein [Arabidopsis thaliana]
gi|75100007|sp|O80958.1|PP194_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g39230, mitochondrial; AltName: Full=Protein LATERAL
ORGAN JUNCTION; Flags: Precursor
gi|3402682|gb|AAC28985.1| unknown protein [Arabidopsis thaliana]
gi|330254554|gb|AEC09648.1| lateral organ junction protein [Arabidopsis thaliana]
Length = 867
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 150/350 (42%), Gaps = 22/350 (6%)
Query: 83 KRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLN--DEDKVDKLY 140
K A + M +GL + +++ +D K + ++A N +N + + + +Y
Sbjct: 498 KNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIY 557
Query: 141 GALLNCYVREGLVDESLSLMQKM-KEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
++N + G ++ ++Q + KE S +YN I+ + G + + +M
Sbjct: 558 NTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMS 617
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
ENG P+ ++ IN + + + + EM+S + +D Y + + +
Sbjct: 618 ENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSM-ELKLDLPAYGALIDGFCKKNDM 676
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR---- 315
+ A + ++ ++ YN LIS + +LG D + + KK +N
Sbjct: 677 KTAYTLFSELPELGLMPNVSV-YNSLISGFRNLGKMDAAIDLY-------KKMVNDGISC 728
Query: 316 ---DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
Y TM+ L+K G + A + E D + +++ G S+KG KA +L
Sbjct: 729 DLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKML 788
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL---AVHEENKF 419
+E+ KK TP +S + AG+ + N+ +AF E L VH++ F
Sbjct: 789 EEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVF 838
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/293 (19%), Positives = 125/293 (42%), Gaps = 5/293 (1%)
Query: 121 ESAETYFNSLNDEDKVDKLYGALLN----CYVREGLVDESLSLMQKMKEMGSFGSALNYN 176
ES E ND + +G + N + ++G VD + S ++ M++ G + + YN
Sbjct: 429 ESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYN 488
Query: 177 GIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQ 236
+M + + + +M E G+ P+NF+Y I I+ + + + +V+ +M +
Sbjct: 489 NMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNA- 547
Query: 237 SHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKD 296
S+ + Y+T+ N G KA L+ S YN +I + +G+ D
Sbjct: 548 SNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTD 607
Query: 297 EMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIIL 356
++ + K + +++ K ++ A +M E + D ++
Sbjct: 608 SAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALI 667
Query: 357 LGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
G+ +K ++ A + E+ + G P + ++ + +G+ + M+ A + K+
Sbjct: 668 DGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKK 720
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 93/439 (21%), Positives = 176/439 (40%), Gaps = 99/439 (22%)
Query: 56 VLDQWVLEGQKISELELQRVIR-QLRSRKRFKHALQV-----SEWMSGQGLAFSVH---- 105
+ ++ VL G + Q ++R LR RK + A+++ S GL FS+
Sbjct: 226 IYNKMVLIGVAGDNVTTQLLMRASLRERKP-EEAVKIFRRVMSRGAEPDGLLFSLAVQAA 284
Query: 106 ----DHAVQLDLIGKVRG----LESAETYFNSL-------NDEDKV---DKLYG------ 141
D + LDL+ ++RG S ETY + + N E+ V D++ G
Sbjct: 285 CKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMS 344
Query: 142 -----ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
+L+N Y + + ++L L +M+E G + ++ ++ + + EK + +
Sbjct: 345 VIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYM 404
Query: 197 DMKENGVPPDNFSYRICINS-YGARSELSSMENVLQEMESQSHISMDWGTYSTVAN---- 251
MK + P + I A S +++E ES W + + N
Sbjct: 405 RMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFES-------WIAHGFMCNKIFL 457
Query: 252 YYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKD-------EMMK---- 300
+ G + A +LK E + + YN+++ + + N D EM++
Sbjct: 458 LFCKQGKVDAATSFLKMMEQ-KGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLE 516
Query: 301 ---------FWGLQKIKCKK-------QLNRD--------YITMLGSLVKIGELEEAEKM 336
G K K ++ Q+N Y T++ L K+G+ +A++M
Sbjct: 517 PNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEM 576
Query: 337 LE------EWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSII 390
L+ + +SC Y N I+ G+ + G + A +E+ + GK+P +++ +
Sbjct: 577 LQNLIKEKRYSMSCTSY-----NSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSL 631
Query: 391 AAGYADKNNMEKAFECMKE 409
G+ N M+ A E E
Sbjct: 632 INGFCKSNRMDLALEMTHE 650
>gi|302769103|ref|XP_002967971.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
gi|300164709|gb|EFJ31318.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
Length = 1354
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/357 (19%), Positives = 147/357 (41%), Gaps = 62/357 (17%)
Query: 101 AFSVHDHAVQLDLI---GKVRGLESAETYFNSLNDEDKV--DKLYGALLNCYVREGLVDE 155
AF V D A+ + +I GK++ ++AE F L Y ALL+ Y G +
Sbjct: 629 AFEVKDSAMHVAIIASYGKLKLWQNAEIVFRDLQRHGFAGNTSAYSALLSAYAETGNFER 688
Query: 156 SLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
+ + M G +A N ++ + G+ +++ + + E G+ P++ ++ + +
Sbjct: 689 ATRALDNMVAAGLQPNAACANYVLEAFGRAGKAKELSEFYQRLPEMGITPNSRTFVVIFH 748
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK 275
++ L ++ ++M + G ++ + + L + + + E +
Sbjct: 749 AFSRNGNLEEARSMYRQMR-------EAGFSPSIQVFKALLALYSRETVEIDAEELVKDI 801
Query: 276 SKDALG-----YNHLISHYASLGN-KDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGE 329
K L YNH+IS Y+ LG+ + + F G+Q+I C
Sbjct: 802 KKAGLELDMDIYNHMISLYSKLGSYRKAALVFKGMQEIGCSP------------------ 843
Query: 330 LEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSI 389
D N +++ YS+ M+++A A+L+E++K G P ++++
Sbjct: 844 ------------------DATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTT 885
Query: 390 IAAGYADKNNMEKA---FECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEV 443
+ + Y E A F+ + E + + +++ ++ G++R +EEV
Sbjct: 886 LISAYGRLQAYEDAELVFKSIAETGCKPDATAY-----NVMINVYRKAGEHRKIEEV 937
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 74/154 (48%), Gaps = 6/154 (3%)
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE----DKVDKL 139
R A+ + E M QG + + + + G+ +E+A + F + ++ D V
Sbjct: 200 RLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVT-- 257
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ++L+ + R+G ++E + M++ + YN ++ +Y G H K ++ + MK
Sbjct: 258 YNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMK 317
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
E G PD+ ++ + I++ G ++ + ++M
Sbjct: 318 EEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDM 351
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 111/276 (40%), Gaps = 43/276 (15%)
Query: 175 YNGIMCLY-----------------------------------TNTGQHEKIPDVLL-DM 198
YN +M +Y T G E + LL D+
Sbjct: 117 YNSLMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLLQDV 176
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
G+ PD +Y I++ + LS + +EM+ Q W TY+ + + Y AG
Sbjct: 177 YAAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIW-TYNAMISVYGRAGR 235
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQK-IKCKKQLNRDY 317
E A + ++ + DA+ YN ++ +A G +E+ + G+ + +C Y
Sbjct: 236 VEAASSIFRIMQE-QGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSD-EITY 293
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
TM+ K G +AE++ + + C D +++ + G + +A A+ ++++K
Sbjct: 294 NTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLK 353
Query: 378 KGKTPTPNSWSIIAAGYADKN---NMEKAFECMKEA 410
PT ++S + YA + + E + CM A
Sbjct: 354 SQVRPTLQAFSAMICAYAKADMFSDAEHTYSCMLRA 389
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/325 (20%), Positives = 135/325 (41%), Gaps = 24/325 (7%)
Query: 93 EWMSGQGLAFSVHDHAVQLDLI------------GKVRGLESA---ETYFNSLNDEDKVD 137
+W S Q L + D + DL+ G GL S+ + Y L +
Sbjct: 129 DWNSVQQLLCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLLQDVYAAGLRPDTIT- 187
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
Y L++ + +++ + ++M+ G YN ++ +Y G+ E +
Sbjct: 188 --YNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRI 245
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
M+E G PD +Y ++++ + +E + + M + S D TY+T+ + Y AG
Sbjct: 246 MQEQGFTPDAVTYNSVLHAFARDGRIEEVERI-RGMMRDARCSSDEITYNTMIHMYGKAG 304
Query: 258 LKEKA-IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMK-FWGLQKIKCKKQLNR 315
+ KA +Y++ E+ + D++ + LI G +E F + K + + L +
Sbjct: 305 MHRKAEELYVQMKEE--GRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTL-Q 361
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
+ M+ + K +AE + D +++L + + M EK + K +
Sbjct: 362 AFSAMICAYAKADMFSDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKAEMPEKCIILYKAM 421
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNM 400
V G P + ++I+ + K+++
Sbjct: 422 VGSGLKPELSVYAIMVRVFYQKSSL 446
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 65/132 (49%), Gaps = 1/132 (0%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L++ Y R +++ + + + E G A YN ++ +Y G+H KI +V+ MK
Sbjct: 883 YTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEVIEQMK 942
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+G P + + ++SYG E VL+ + + +S D Y+++ N ++
Sbjct: 943 ADGFEPSLTTIHMLMDSYGKGGATGKAEEVLETL-PEIGMSPDAIHYTSIINSHLNNKDY 1001
Query: 260 EKAIIYLKKCED 271
A+I+L+K D
Sbjct: 1002 LSAVIWLRKMTD 1013
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 4/168 (2%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ L+ Y R +V E+ +L+++M + G+ + Y ++ Y +E V +
Sbjct: 848 FNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIA 907
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E G PD +Y + IN Y E +E V+++M++ T + + Y G
Sbjct: 908 ETGCKPDATAYNVMINVYRKAGEHRKIEEVIEQMKADG-FEPSLTTIHMLMDSYGKGGAT 966
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKI 307
KA L+ +I S DA+ Y +I+ + L NKD + L+K+
Sbjct: 967 GKAEEVLETLPEI-GMSPDAIHYTSIINSH--LNNKDYLSAVIWLRKM 1011
>gi|297734265|emb|CBI15512.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 124/271 (45%), Gaps = 12/271 (4%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y AL+N +EG V E+ L +M G + YN ++ Y G+ ++ +L DM
Sbjct: 331 YTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMI 390
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
NG+ PD+F+ + + YG + S N++ E++ + +S+ YS Y I+A +
Sbjct: 391 WNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQ-RFGVSISQDIYS----YLIVALCR 445
Query: 260 EKAIIYLKKCEDIVSKS--KDALG-YNHLISHYASLGNKDE--MMKFWGLQKIKCKKQLN 314
E K + +SK K L YN LI + E ++K + K + K L
Sbjct: 446 ENRPFAAKNLLERMSKDGHKPELEIYNELIKSFCQCDCIAEALLLKMEMVDK-EIKPNL- 503
Query: 315 RDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
Y ++G L ++ E E ++ E S D + + GY ++ I+KA+++L
Sbjct: 504 ATYRAVIGCLSRLSRSMEGESLVGEMVASGMLPDLEICRALFYGYCRENDIDKAESLLSF 563
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
K+ + S++ + + K ++ ++ E
Sbjct: 564 FAKEFQIHDTESFNALIRITSAKGDIARSLE 594
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 66/364 (18%), Positives = 134/364 (36%), Gaps = 67/364 (18%)
Query: 71 ELQRVIRQLRSRKRFKHALQVSEWMSGQ-GLAFSVHDHAVQLDLIGKVRGLESAETYF-- 127
E+ RV+ LR + AL W+ GL S ++ + + + R A +
Sbjct: 102 EISRVL--LRCQSDSFTALSFFNWVKNDLGLRPSTQNYCIVVHTLAWSRNFSQAMKFLCE 159
Query: 128 ------NSLNDEDKVDKL-------------YGALLNCYVREGLVDESLSLMQKMKEMGS 168
+ L ED L + L+ Y+R G V E L ++M +G
Sbjct: 160 LVELVKDDLPSEDVFKNLILCTEDCNWDPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGF 219
Query: 169 FGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMEN 228
+ + N ++ ++ +V +M+ G+ P+ +++ I + + +
Sbjct: 220 VPTVITSNYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNK 279
Query: 229 VLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISH 288
L++ME + D + YN LI+
Sbjct: 280 FLEKMEEEGF-------------------------------------DPDIVTYNTLINS 302
Query: 289 YASLGNKDEMMKFWGLQKIKCKKQLNRD---YITMLGSLVKIGELEEAEKMLEEWELSCY 345
Y G D+ F+ L KI ++ + D Y ++ L K G + EA ++
Sbjct: 303 YCRKGRLDD--AFY-LYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGL 359
Query: 346 CYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
D N ++ GY ++G ++++ ++L +++ G +P + ++ GY + A
Sbjct: 360 SPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALN 419
Query: 406 CMKE 409
+ E
Sbjct: 420 LVVE 423
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 140/323 (43%), Gaps = 10/323 (3%)
Query: 95 MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYG--ALLNCYVREGL 152
M G+G++ V +++ + V L A N + E+ +Y L++ +EG
Sbjct: 224 MVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGK 283
Query: 153 VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
V E+ +++ M + + Y+ +M Y + V M + GV PD Y I
Sbjct: 284 VKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSI 343
Query: 213 CINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDI 272
IN + N+ +E+ Q ++ D TY+++ + K I Y+ D
Sbjct: 344 MINGLCKIKRVDEALNLFEEIH-QKNMVPDTVTYTSLID----CLCKSGRISYVWDLFDE 398
Query: 273 V---SKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGE 329
+ + D + YN+LI G+ D + + K + + + +L L K+G
Sbjct: 399 MLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGR 458
Query: 330 LEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSI 389
L+ A + ++ YC + R +++ G ++G++++A A+ + G ++ I
Sbjct: 459 LKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEI 518
Query: 390 IAAGYADKNNMEKAFECMKEALA 412
+ + DK+ +KA + ++E +A
Sbjct: 519 MIRAFFDKDENDKAEKLVREMIA 541
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/355 (18%), Positives = 150/355 (42%), Gaps = 12/355 (3%)
Query: 64 GQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESA 123
G + + + L +++ L + K AL+ + + QG S + + ++ + K+ +A
Sbjct: 123 GYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAA 182
Query: 124 ETYFNSLNDEDKVDK--LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCL 181
+ +Y +++ ++ LVDE+ L +M G + Y+ ++
Sbjct: 183 IRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSG 242
Query: 182 YTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISM 241
+ GQ + D+L +M + PD ++Y I +++ ++ ENVL M ++ +++
Sbjct: 243 FCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVM-VKACVNL 301
Query: 242 DWGTYSTVANYYIIAGL--KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMM 299
D YST+ + Y + K + Y + + D Y+ +I+ + DE +
Sbjct: 302 DVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGV---TPDVHCYSIMINGLCKIKRVDEAL 358
Query: 300 KFWGLQKIKCKKQL--NRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL 357
+ ++I K + Y +++ L K G + + +E D N ++
Sbjct: 359 NLF--EEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLID 416
Query: 358 GYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
+ G +++A A+ ++ + P +++I+ G ++ A E ++ L
Sbjct: 417 ALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLT 471
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 71/150 (47%), Gaps = 2/150 (1%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
+ D+ + GQ + +I L A+ + M Q + +V+ + LD +
Sbjct: 395 LFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLC 454
Query: 116 KVRGLESAETYFNSLNDEDKV--DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
KV L++A +F L + + Y ++N +EGL+DE+L+L +M++ G A+
Sbjct: 455 KVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAV 514
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
+ ++ + + +++K ++ +M G+
Sbjct: 515 TFEIMIRAFFDKDENDKAEKLVREMIARGL 544
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 156/384 (40%), Gaps = 55/384 (14%)
Query: 141 GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKE 200
GA+ N Y R+G V E++++ ++M + +YN IM + ++G ++ V + M++
Sbjct: 81 GAMKN-YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRD 139
Query: 201 NGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTV----------A 250
G+ PD +S+ I + S+ S + +L M SQ M+ Y TV A
Sbjct: 140 RGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQG-CEMNVVAYCTVVGGFYEENFKA 198
Query: 251 NYYIIAGLKEKAIIYL------------------KKCEDIVSKS------KDALGYNHLI 286
Y + G + + L K+CE ++ K + YN I
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFI 258
Query: 287 SHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE----KMLEE-WE 341
G D ++ G + K Y ++ L K + +EAE KM+ E E
Sbjct: 259 QGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLE 318
Query: 342 LSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNME 401
Y Y N ++ GY + GM++ A+ ++ + V G P ++ + G +
Sbjct: 319 PDSYTY-----NTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETN 373
Query: 402 KAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK--VQKRNM 459
+A EAL K +P L ++++ L + + E + + K + +
Sbjct: 374 RALALFNEALG-----KGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQT 428
Query: 460 YHALTEAHIRSG--QEVDGLLESM 481
++ L + G + DGL++ M
Sbjct: 429 FNILVNGLCKMGCVSDADGLVKVM 452
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 148/365 (40%), Gaps = 33/365 (9%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ LL ++G V E L+ K+ + G + YN + G+ + ++ +
Sbjct: 219 FNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLI 278
Query: 200 ENGVPPD-----NFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYI 254
E G PD N Y +C NS +E+ + V + +E S+ TY+T+ Y
Sbjct: 279 EQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSY------TYNTLIAGYC 332
Query: 255 IAGLKEKAIIYLKKCEDIVSKS------KDALGYNHLISHYASLGNKDEMMKFWGLQKIK 308
G+ + A E IV + D Y LI G + + + K
Sbjct: 333 KGGMVQLA-------ERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGK 385
Query: 309 CKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKA 368
K Y T++ L G + EA ++ E + + NI++ G + G + A
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445
Query: 369 DAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVS 428
D ++K ++ KG P +++I+ GY+ + ME A E + L + P +
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVML-----DNGVDPDVYTYN 500
Query: 429 SILDWLGDNRDVEEVEAFVSSLKIKVQKRNM--YHALTEAHIRSGQ--EVDGLLESMKAD 484
S+L+ L E+V ++ K N+ ++ L E+ R + E GLLE MK
Sbjct: 501 SLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNK 560
Query: 485 DIDED 489
++ D
Sbjct: 561 SVNPD 565
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 143/335 (42%), Gaps = 43/335 (12%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
LY L+ +G++ E+ L +M E G +N ++ G ++ M
Sbjct: 393 LYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM 452
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQ--SHISMDWGTYSTVANYYIIA 256
G PD F++ I I+ Y + + MEN L+ ++ + + D TY+++ N
Sbjct: 453 ISKGYFPDIFTFNILIHGYSTQLK---MENALEILDVMLDNGVDPDVYTYNSLLN----- 504
Query: 257 GLKEKAIIYLKKCEDIVSKSK---------DALGYNHLISHYASLGNKDEMMKFWGLQKI 307
GL + + K ED++ K + +N L+ DE + L+++
Sbjct: 505 GLCKTS-----KFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGL--LEEM 557
Query: 308 KCKKQLNRDYITMLGSLV----KIGELEEAEKMLEEWELSCYCYDFRVP--NIILLGYSQ 361
K K +N D +T G+L+ K G+L+ A + + E Y P NII+ +++
Sbjct: 558 K-NKSVNPDAVT-FGTLIDGFCKNGDLDGAYTLFRKME-EAYKVSSSTPTYNIIIHAFTE 614
Query: 362 KGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWR 421
K + A+ + +E+V + P ++ ++ G+ N+ ++ + E + EN F
Sbjct: 615 KLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMM----ENGFI- 669
Query: 422 PKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQK 456
P + + +++ L V E + + VQK
Sbjct: 670 PSLTTLGRVINCLCVEDRVYEAAGIIHRM---VQK 701
>gi|414868449|tpg|DAA47006.1| TPA: hypothetical protein ZEAMMB73_127498 [Zea mays]
Length = 870
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 87/169 (51%), Gaps = 11/169 (6%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L++ + + DE+L L +KMK + + YN ++ +Y TG++++I V +M+
Sbjct: 388 YSTLMDGFSKLEKYDEALKLREKMKSLRIQLDRVCYNTLLAIYVKTGKYDEIATVCEEME 447
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ G+ D +Y IN YG + L + ++Q+M +Q ++ TYST+ + Y AG+
Sbjct: 448 KLGIEKDTVTYNSLINGYGKQGRLDMVAFLVQDMRAQG-VAPSVLTYSTLIDIYSKAGMH 506
Query: 260 EKAI-IYLKKCE-----DIV--SKSKDALGYNHLISHYASLGNKDEMMK 300
A +YL E D+V S D L N L+ SL DEMMK
Sbjct: 507 GDAFNVYLDFKESGLKADVVLFSSFIDTLAKNGLVECALSL--LDEMMK 553
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 133/305 (43%), Gaps = 12/305 (3%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP-DVLLDM 198
+ AL++ Y R GL E++ +++ MK G + ++YN ++ G + M
Sbjct: 247 HSALISAYARSGLATEAMGVLESMKGAGLRPTTVSYNAVIDACGKGGVDLRFTLGYFRQM 306
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
++G+ PD ++ + + L V EM D TY+T + G
Sbjct: 307 LQDGLCPDRKTFNSLLAACSRAGHLEDARTVFDEMIHLGS-GRDIYTYNTFVDAICKCGN 365
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKK-QLNR-D 316
A+ + E +K + + Y+ L+ ++ L DE +K +K+K + QL+R
Sbjct: 366 MGLALQVVLDMEANNAK-PNVVTYSTLMDGFSKLEKYDEALKLR--EKMKSLRIQLDRVC 422
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y T+L VK G+ +E + EE E D N ++ GY ++G ++ +++++
Sbjct: 423 YNTLLAIYVKTGKYDEIATVCEEMEKLGIEKDTVTYNSLINGYGKQGRLDMVAFLVQDMR 482
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGD 436
+G P+ ++S + Y+ AF + +E+ + L SS +D L
Sbjct: 483 AQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLD----FKESGL-KADVVLFSSFIDTLAK 537
Query: 437 NRDVE 441
N VE
Sbjct: 538 NGLVE 542
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 140/312 (44%), Gaps = 17/312 (5%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAET--YFNS-LNDEDKVD-KLYGAL 143
A+ V E M G GL + + +D GK G++ T YF L D D K + +L
Sbjct: 263 AMGVLESMKGAGLRPTTVSYNAVIDACGK-GGVDLRFTLGYFRQMLQDGLCPDRKTFNSL 321
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
L R G ++++ ++ +M +GS YN + G V+LDM+ N
Sbjct: 322 LAACSRAGHLEDARTVFDEMIHLGSGRDIYTYNTFVDAICKCGNMGLALQVVLDMEANNA 381
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG-LKEKA 262
P+ +Y ++ + + + ++M+S I +D Y+T+ Y+ G E A
Sbjct: 382 KPNVVTYSTLMDGFSKLEKYDEALKLREKMKSL-RIQLDRVCYNTLLAIYVKTGKYDEIA 440
Query: 263 IIYLKKCEDI--VSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR--DYI 318
+ CE++ + KD + YN LI+ Y G D M+ F +Q ++ + Y
Sbjct: 441 TV----CEEMEKLGIEKDTVTYNSLINGYGKQGRLD-MVAFL-VQDMRAQGVAPSVLTYS 494
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
T++ K G +A + +++ S D + + + ++ G++E A ++L E++K
Sbjct: 495 TLIDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLAKNGLVECALSLLDEMMKM 554
Query: 379 GKTPTPNSWSII 390
G P +++ I
Sbjct: 555 GIKPNVVTYNTI 566
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 153/351 (43%), Gaps = 27/351 (7%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEM-GSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
Y L+ + G + ++ L+++M++ G + YN + +G+ + +V+ +M
Sbjct: 21 YFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNM 80
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
K+ PD ++ I L + VL EME +S + + TY+T+ N AG
Sbjct: 81 KDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEME-RSGFAANLVTYNTLINGLSSAGR 139
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
+A++ ++ ++ + D YN +I + G D F L+++K + + D
Sbjct: 140 SGEAVLVMQG----MTTTPDTQTYNAIIHGFCKSGEIDRAYGF--LEEMKQRAGCSPDTF 193
Query: 319 T---MLGSLVKIGELEEAEKMLEEW--ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
T ++ L K L +A+++L+E C C N ++ GY + +++A +L
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDC-CASVVAFNTLVDGYCKAQDLDRARELLS 252
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDW 433
+++ G P ++S I G +++K F A+ E+ KP +V+ +
Sbjct: 253 SMLEHGCAPDVVTYSTIIDGLCRCGDVDKGF-------ALLEKMVSRGCKPDVVTYTVLV 305
Query: 434 LGDNRDVEEVEAFVSSLKIKVQKRNMYHALTEAHIRSGQEVDGLLESMKAD 484
G + + VEA ++ KR + T + DGL + K D
Sbjct: 306 TGLCKAGKMVEA------CRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLD 350
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 100/209 (47%), Gaps = 7/209 (3%)
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
DN++Y + + ++ EL + ++L+EME Q ++ Y+ + +G +A+
Sbjct: 17 DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76
Query: 266 LKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWG-LQKIKCKKQLNRDYITMLGSL 324
+K +D K D + +N LI+ G DE + +++ L Y T++ L
Sbjct: 77 VKNMKDGACKP-DVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANL-VTYNTLINGL 134
Query: 325 VKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK-GKTPT 383
G EA +++ + D + N I+ G+ + G I++A L+E+ ++ G +P
Sbjct: 135 SSAGRSGEAVLVMQGMTTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPD 191
Query: 384 PNSWSIIAAGYADKNNMEKAFECMKEALA 412
++SI+ G +N+ KA E ++E +
Sbjct: 192 TFTYSILINGLCKSSNLRKADELLQEMIG 220
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/323 (19%), Positives = 136/323 (42%), Gaps = 26/323 (8%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ L+ + G +DE+ ++ +M+ G + + YN ++ ++ G+ + +L M+
Sbjct: 92 FNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRS---GEAVLVMQ 148
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
PD +Y I+ + E+ L+EM+ ++ S D TYS + N +
Sbjct: 149 GMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNL 208
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFW-GLQKIKCKKQLNRDYI 318
KA L++ + +N L+ Y + D + + + C + Y
Sbjct: 209 RKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDV-VTYS 267
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
T++ L + G++++ +LE+ D +++ G + G + +A ++K +++
Sbjct: 268 TIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLED 327
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNR 438
G TP ++S++ G + ++ A + L++SI D G
Sbjct: 328 GCTPNAVTYSLVFDGLCKIDKLDMAND--------------------LLTSIRDK-GRIT 366
Query: 439 DVEEVEAFVSSLKIKVQKRNMYH 461
DV EA + S+K ++ R +
Sbjct: 367 DVVAFEALLLSVKKRLLDRAAFQ 389
>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
Length = 563
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/388 (22%), Positives = 151/388 (38%), Gaps = 49/388 (12%)
Query: 76 IRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDK 135
I L R+ K A V E M G+GL +V+ H +D + K+ E A F L
Sbjct: 150 IDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSS 209
Query: 136 VD---KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
Y ++ Y REG + + L+ +M E G + Y ++ + G ++
Sbjct: 210 YKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAF 269
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
+++ MK+ G P+ ++Y I+ + + ++ VL+ SQ + D TY+ +
Sbjct: 270 ELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQG-LKFDKITYTIL--- 325
Query: 253 YIIAGLKEKAIIYLKKCEDIVSKS---KDALGYNHLISHYASLGNKDEMMKFW------G 303
I K+ I Y D + ++ D Y LIS Y +E KF+ G
Sbjct: 326 -ITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIG 384
Query: 304 LQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEW-ELSCYCYDFRVPNIILLGYSQK 362
L K + Y +M+ K+G A ++ E + C+ D ++ G ++
Sbjct: 385 LLPTK------QTYTSMIAGYCKVGRSTLALRVFERMVQNGCFA-DSITYGALISGLCKE 437
Query: 363 GMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRP 422
+E+A A+ + ++ K P + + Y R
Sbjct: 438 SRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCR------------------------RE 473
Query: 423 KPSLVSSILDWLGDNRDVEEVEAFVSSL 450
K S+ S+LD L + V V+ V L
Sbjct: 474 KTSIAVSVLDRLDKRQQVHTVDVVVRKL 501
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 64/326 (19%), Positives = 134/326 (41%), Gaps = 29/326 (8%)
Query: 136 VDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVL 195
+++ +GAL+ REG V+E +L+ M G ++ G+ + + +
Sbjct: 72 MNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFF 131
Query: 196 LDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYII 255
M E G PP+ +Y I+ R + +VL+EM + + + T++T+ +
Sbjct: 132 RRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRG-LKPNVYTHTTLIDGLCK 190
Query: 256 AGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGN--KDEMMKFWGLQKIKCKKQL 313
G E+A K S + Y +I Y G + EM+ +++ K
Sbjct: 191 IGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQ-GLKPNT 249
Query: 314 NRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
N Y T++G K G + A +++ + + + + N ++ G+ +KG I++A VL+
Sbjct: 250 N-TYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLR 308
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDW 433
+G +++I+ + + ++ A + + D
Sbjct: 309 MATSQGLKFDKITYTILITEHCKQGHITYALD------------------------LFDR 344
Query: 434 LGDNRDVEEVEAFVSSLKIKVQKRNM 459
+ +N ++EA+ S + Q+R M
Sbjct: 345 MVENGCCPDIEAYTSLISTYCQQRQM 370
>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
Length = 671
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 153/388 (39%), Gaps = 49/388 (12%)
Query: 76 IRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDK 135
I L R+ K A V E M G+GL +V+ H +D + K+ E A F L
Sbjct: 258 IDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSS 317
Query: 136 VDK---LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
Y ++ Y REG + + L+ +M E G + Y ++ + G ++
Sbjct: 318 YKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAF 377
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
+++ MK+ G P+ ++Y I+ + + ++ VL+ SQ + D TY+ +
Sbjct: 378 ELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQG-LKFDKITYTIL--- 433
Query: 253 YIIAGLKEKAIIYLKKCEDIVSKS---KDALGYNHLISHYASLGNKDEMMKFW------G 303
I K+ I Y D + ++ D Y LIS Y +E KF+ G
Sbjct: 434 -ITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIG 492
Query: 304 LQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEW-ELSCYCYDFRVPNIILLGYSQK 362
L K + Y +M+ K+G A ++ E + C+ D ++ G ++
Sbjct: 493 LLPTK------QTYTSMIAGYCKVGRSTLALRVFERMVQNGCFA-DSITYGALISGLCKE 545
Query: 363 GMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRP 422
+E+A A+ + ++ K P + + Y C +E
Sbjct: 546 SRLEEAKALYEGMLDKRLVPCEVTRVTLTFEY-----------CRRE------------- 581
Query: 423 KPSLVSSILDWLGDNRDVEEVEAFVSSL 450
K S+ S+LD L + V V+ V L
Sbjct: 582 KTSIAVSVLDRLDKRQQVHTVDVVVRKL 609
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/325 (19%), Positives = 132/325 (40%), Gaps = 29/325 (8%)
Query: 137 DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
++ + AL+ REG V+E +L+ M G ++ G+ + + +
Sbjct: 181 ERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFR 240
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
M E G PP+ +Y I+ R + +VL+EM + + + T++T+ +
Sbjct: 241 RMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRG-LKPNVYTHTTLIDGLCKI 299
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGN--KDEMMKFWGLQKIKCKKQLN 314
G E+A K S + Y +I Y G + EM+ +++ K N
Sbjct: 300 GWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQ-GLKPNTN 358
Query: 315 RDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
Y T++G K G + A +++ + + + + N ++ G+ +KG I++A VL+
Sbjct: 359 -TYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRM 417
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWL 434
+G +++I+ + + ++ A + + D +
Sbjct: 418 ATSQGLKFDKITYTILITEHCKQGHITYALD------------------------LFDRM 453
Query: 435 GDNRDVEEVEAFVSSLKIKVQKRNM 459
+N ++EA+ S + Q+R M
Sbjct: 454 VENGCCPDIEAYTSLISTYCQQRQM 478
>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 165/395 (41%), Gaps = 26/395 (6%)
Query: 62 LEGQKISELELQRVIRQLRS-------RKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLI 114
L G+ + E + +R +R S F AL+ E G G ++ + + +L+
Sbjct: 137 LFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYE--CGVGGKTNISPNVLSFNLV 194
Query: 115 GKVR---GL--ESAETYFNSLNDEDKVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGS 168
K GL + E + + + D Y L++ +E +DE++ L+ +M+ G
Sbjct: 195 IKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGC 254
Query: 169 FGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMEN 228
F S++ +N ++ G ++ ++ +M G P+ +Y IN + +L +
Sbjct: 255 FPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVS 314
Query: 229 VLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISH 288
+L M + + D TY T+ N + G + L E+ + Y+ LIS
Sbjct: 315 LLDRMVASKCVPNDV-TYGTLINGLVKQGRSVDGVHLLSSLEE-RGHHANEYAYSTLISG 372
Query: 289 YASLGNKDEMMKFW-GLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEW-ELSCYC 346
+E M W + + C+ + Y ++ L + G+L+EA+++L E C
Sbjct: 373 LFKEEKSEEAMGLWKKMVEKGCQPNIVV-YSALIDGLCREGKLDEAKEILCEMVNKGCTP 431
Query: 347 YDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFEC 406
F ++I G+ + G +KA V KE+ K P +S++ G + + +A
Sbjct: 432 NAFTYSSLI-KGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAM-- 488
Query: 407 MKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVE 441
+ H + RP SS++ L + VE
Sbjct: 489 ---MMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVE 520
>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g22470, mitochondrial-like [Glycine max]
Length = 468
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 132/307 (42%), Gaps = 35/307 (11%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQ--------HEK 190
+Y A+++ ++ LV+E+ L +M F + + YN ++C + GQ HE
Sbjct: 152 MYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEM 211
Query: 191 I-----PDV-----LLD---------------MKENGVPPDNFSYRICINSYGARSELSS 225
I PDV L+D M + GV P+ +SY I IN +
Sbjct: 212 ILKNINPDVYTFSILIDALCKEGKNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDE 271
Query: 226 MENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHL 285
N+L+EM ++ + D TY+++ + +G A+ + + + D + Y L
Sbjct: 272 AMNLLREMLHKNMVP-DTVTYNSLIDGLCKSGRITSALNLMNEMHH-RGQPADVVTYTSL 329
Query: 286 ISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCY 345
+ N D+ + K + + Y ++ L K G L+ A+++ + +
Sbjct: 330 LDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGC 389
Query: 346 CYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
C D +++ G ++GM ++A A+ ++ G P ++ II +K+ +KA +
Sbjct: 390 CIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEK 449
Query: 406 CMKEALA 412
+ E +A
Sbjct: 450 LLHEMIA 456
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 71/346 (20%), Positives = 147/346 (42%), Gaps = 39/346 (11%)
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
L+NC+ G + S SL+ K+ ++G + + + +M G+ +K+ +
Sbjct: 51 LINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQA 110
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY-YIIAGLKEK 261
+ SY +N E +L+ +E +S T V Y II GL +
Sbjct: 111 FQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRS-------TRPNVVMYSAIIDGLCKD 163
Query: 262 AIIYLKKCEDIVSKS------KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR 315
++ + D+ S+ + + YN LI + G ++M + L K +N
Sbjct: 164 KLV--NEAYDLYSEMDAREIFPNVITYNTLICAFCLAG---QLMGAFSLLHEMILKNINP 218
Query: 316 DYIT---MLGSLVKIGE-LEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAV 371
D T ++ +L K G+ ++ + + ++ Y + NI++ G + +++A +
Sbjct: 219 DVYTFSILIDALCKEGKNAKQIFHAMVQMGVNPNVYSY---NIMINGLCKCKRVDEAMNL 275
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLV---S 428
L+E++ K P +++ + G + A M E +H R +P+ V +
Sbjct: 276 LREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNE---MHH-----RGQPADVVTYT 327
Query: 429 SILDWLGDNRDVEEVEAFVSSLKIKVQKRNM--YHALTEAHIRSGQ 472
S+LD L N+++++ A +K + + M Y AL + + G+
Sbjct: 328 SLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGR 373
>gi|224130680|ref|XP_002320901.1| predicted protein [Populus trichocarpa]
gi|222861674|gb|EEE99216.1| predicted protein [Populus trichocarpa]
Length = 475
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 121/259 (46%), Gaps = 4/259 (1%)
Query: 150 EGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFS 209
+ + + L + F + +YN ++ + GQ + M + V PD S
Sbjct: 184 QNYIKPAFDLFKDAHTYDVFPNTKSYNILIRAFCLNGQISMAYSLFNQMFKRDVMPDVES 243
Query: 210 YRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC 269
YRI + + +S+++ ++L++M ++ ++ D +Y+T+ N +A L +
Sbjct: 244 YRILMQALCRKSQVNGAVDLLEDMLNKGYVP-DALSYTTLLNSLCRKKKLREAYKLLCRM 302
Query: 270 EDIVSKSKDALGYNHLISHYASLGNKDEMMKFW-GLQKIKCKKQLNRDYITMLGSLVKIG 328
+ + + D + YN +I + G + K ++ C L Y T++G L G
Sbjct: 303 K-VKGCNPDIIHYNTVILGFCREGRAMDACKVLEDMESNGCMPNL-VSYRTLVGGLCDQG 360
Query: 329 ELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWS 388
+EA+ LEE + + F V N ++ G+ G IE+A V++E++K G+ P +W
Sbjct: 361 MFDEAKSHLEEMMMKGFSPHFAVSNALIKGFCNVGKIEEACGVVEELLKHGEAPHTETWV 420
Query: 389 IIAAGYADKNNMEKAFECM 407
++ + + +++++ E +
Sbjct: 421 MMVSRICEVDDLQRIGEIL 439
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 143/334 (42%), Gaps = 41/334 (12%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLN 145
AL+V + M G G V + L+ + K R L AE N + + L + L++
Sbjct: 289 ALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIH 348
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
Y EG +D++L L M + YN ++ G +K D+ DM + P
Sbjct: 349 GYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFP 408
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
++ +Y I I+S+ + ++ L EM ++ I + TY+++ Y +G K +
Sbjct: 409 NHVTYSILIDSHCEKGQVEDAFGFLDEMINKG-ILPNIMTYNSIIKGYCRSGNVSKGQKF 467
Query: 266 LKKCEDIVSK-SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSL 324
L+K +V+K S D + YN LI Y +D+M + L + K+++ D +T
Sbjct: 468 LQKM--MVNKVSPDLITYNTLIHGYI---KEDKMHDAFKLLNMMEKEKVQPDVVTY---- 518
Query: 325 VKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTP 384
N+++ G+S G +++A + +++ KG P
Sbjct: 519 ----------------------------NMLINGFSVHGNVQEAGWIFEKMCAKGIEPDR 550
Query: 385 NSWSIIAAGYADKNNMEKAFECMKEALAVHEENK 418
++ + G+ N ++AF+ E L +E +
Sbjct: 551 YTYMSMINGHVTAGNSKEAFQLHDEMLQRGKEKR 584
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/363 (20%), Positives = 152/363 (41%), Gaps = 29/363 (7%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ +++ R G + +++L+ M G + YN ++ +G +K +V +M
Sbjct: 133 HNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMD 192
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ GV PD S+ I I + E+ + +EM + I D ++S + + G
Sbjct: 193 DFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRG-IKPDLVSFSCLIGLFARRGKM 251
Query: 260 EKAIIYLK--KCEDIVSKSKDALGYNHLISHYASLG-------NKDEMMKFWGLQKIKCK 310
+ A+ YL+ +C +V D + Y +I + G +DEM+ L +
Sbjct: 252 DHAMAYLREMRCFGLVP---DGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVV-- 306
Query: 311 KQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADA 370
Y T+L L K L +AE +L E D ++ GY +G ++KA
Sbjct: 307 -----TYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQ 361
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSI 430
+ ++ + P +++ + G + +++KA + + +H F P S +
Sbjct: 362 LFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDD---MHSREIF--PNHVTYSIL 416
Query: 431 LDWLGDNRDVEEVEAFVSSLKIKVQKRNM--YHALTEAHIRSGQEVDG--LLESMKADDI 486
+D + VE+ F+ + K N+ Y+++ + + RSG G L+ M + +
Sbjct: 417 IDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKV 476
Query: 487 DED 489
D
Sbjct: 477 SPD 479
>gi|147838532|emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]
Length = 676
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 133/307 (43%), Gaps = 17/307 (5%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y AL+N +EG V E+ L +M G + YN ++ Y G+ ++ +L DM
Sbjct: 376 YTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMI 435
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
NG+ PD+F+ + + YG + S N++ E++ + +S+ YS Y I+A +
Sbjct: 436 WNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQ-RFGVSISQDIYS----YLIVALCR 490
Query: 260 EKAIIYLKKCEDIVSKSKDALG---YNHLISHYASLGNKDE--MMKFWGLQKIKCKKQLN 314
E K + +S+ YN LI + E ++K + K + K L
Sbjct: 491 ENRPFAAKNLLERMSQDGHKXELEIYNELIKSFCQCDCIAEALLLKMEMVDK-EIKPNL- 548
Query: 315 RDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
Y +JG L ++ E E ++ E S D + + GY ++ I+KA+++L
Sbjct: 549 ATYRAVJGCLSRLSRSMEGESLVGEMVASGXLPDLEICRALFYGYCRENDIDKAESLLSF 608
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWL 434
K+ + S++ + + K ++ ++ E L + P P ++D L
Sbjct: 609 XAKEFQIHDTESFNALIRITSAKGDIARSLEIQDMMLKMG-----LLPNPLTCKYVIDGL 663
Query: 435 GDNRDVE 441
R V+
Sbjct: 664 WKARRVD 670
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/367 (20%), Positives = 153/367 (41%), Gaps = 44/367 (11%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+IR L R R +AL V + M + V + + L+ K G + A + + D+
Sbjct: 38 LIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKG 97
Query: 135 KVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+ Y ++N +EG VD+++ ++ + G + ++YN ++ + E
Sbjct: 98 CTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAE 157
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
+++ +M + G PP NV+ T++ + ++
Sbjct: 158 ELMGEMGQKGCPP----------------------NVV--------------TFNMLISF 181
Query: 253 YIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQ 312
GL E A+ L++ + ++L YN L+ + D+ M F L +
Sbjct: 182 LCRKGLVEPALEVLEQIPK-YGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYP 240
Query: 313 LNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
Y T+L +L + GE++ A ++L + + N ++ G ++ G ++A +L
Sbjct: 241 DIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELL 300
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILD 432
E+V KG P ++S IAAG ++ +E A + ++ RP L ++I+
Sbjct: 301 NEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKV-----QDMGIRPNTVLYNAIIL 355
Query: 433 WLGDNRD 439
L R+
Sbjct: 356 GLCKRRE 362
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 98/265 (36%), Gaps = 40/265 (15%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y A++ Y G +D + L+ EM A YN ++ G+ VL +M
Sbjct: 3 YNAMVAGYCGAGQLDAARRLVA---EMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEML 59
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
PD +Y I + + RS +L EM + + D TY+ V N G
Sbjct: 60 RRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKG-CTPDIVTYNVVVNGICQEGRV 118
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
+ AI +LK L C+ Y
Sbjct: 119 DDAIEFLKN-----------------------------------LPSYGCEPN-TVSYNI 142
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
+L L E+AE+++ E + N+++ +KG++E A VL++I K G
Sbjct: 143 VLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYG 202
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAF 404
TP S++ + + + M+KA
Sbjct: 203 CTPNSLSYNPLLHAFCKQKKMDKAM 227
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 50/271 (18%), Positives = 114/271 (42%), Gaps = 39/271 (14%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ L++ R+GLV+ +L +++++ + G ++L+YN ++ + + +K L M
Sbjct: 175 FNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV 234
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY-YIIAGL 258
G PD SY + + E+ +L +++ D G + +Y +I GL
Sbjct: 235 SRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLK-------DKGCAPVLISYNTVIDGL 287
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
+ K+K+AL L++ S G + +++ + + C++ D I
Sbjct: 288 TK------------AGKTKEAL---ELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAI 332
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
G + +G + + N I+LG ++ A + ++
Sbjct: 333 RAFGKVQDMGIRP----------------NTVLYNAIILGLCKRRETHSAIDLFAYMIGN 376
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
G P ++++I+ G A + +++A + + E
Sbjct: 377 GCMPNESTYTILIEGLAYEGLIKEARDLLDE 407
>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 942
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 150/356 (42%), Gaps = 23/356 (6%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ++N Y +EG VDE+ + +++M+ + + YN ++ Y + G VL M
Sbjct: 259 YTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMS 318
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E G+P ++ +Y + I Y R ++ E ++ M + ++ +D Y + + Y AG
Sbjct: 319 EKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCM-MEKNLFVDEHVYGVLIHAYCTAGRV 377
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEM------MKFWGLQKIKCKKQL 313
+ A + ++ V + + N LI+ Y LG+ ++ MK W L K
Sbjct: 378 DDA-LRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNL------KPD 430
Query: 314 NRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
+ Y T+L K + +A K+ +E + N +L G +E A +
Sbjct: 431 SYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWN 490
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDW 433
+ K+G P ++ + + ++A K+AL+ F + + I +
Sbjct: 491 LMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALS----KGFTKSITLYNTMICGF 546
Query: 434 LGDNRDVEEVEAFVSSLKIKVQKRNM-YHALTEAHIRSGQEVDGLLESMKADDIDE 488
+ V+ E F+ ++ + Y L + + + G L+E++K D+ E
Sbjct: 547 CKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGN----LVEALKLKDMSE 598
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/361 (21%), Positives = 151/361 (41%), Gaps = 53/361 (14%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV--DKLYGALLN 145
A +V MS +G+ + + + + K +E AE + +++ + +YG L++
Sbjct: 310 AKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIH 369
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
Y G VD++L + M ++G + + N ++ Y G K +VL+ MK+ + P
Sbjct: 370 AYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKP 429
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQS----------------------HISMDW 243
D++ Y ++ + + + + EM ++ H W
Sbjct: 430 DSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIW 489
Query: 244 G------------TYSTVANYYIIAGLKEKAIIYLKKCEDIVSK--SKDALGYNHLISHY 289
TY T+ + + G ++A++ K D +SK +K YN +I +
Sbjct: 490 NLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWK---DALSKGFTKSITLYNTMICGF 546
Query: 290 ASLGNKDEMMKFWGLQKIKCK-KQLNR-----DYITMLGSLVKIGELEEAEKMLEEWELS 343
+M K Q+I K K+L Y T++ K+G L EA K+ + E
Sbjct: 547 C------KMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERD 600
Query: 344 CYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
+ N ++ G + ++K + +L E+ + +P ++ + AG+ DK M+KA
Sbjct: 601 GISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKA 660
Query: 404 F 404
+
Sbjct: 661 Y 661
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 105/286 (36%), Gaps = 44/286 (15%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
++ +L + +G+ +L + M + G S + N ++ G+ K V M
Sbjct: 188 VFDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQM 247
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
G+ PD FSY I +N+Y + N ++EME
Sbjct: 248 IALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSC--------------------- 286
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
CE + + YN LI Y SLG+ K L K + +R Y
Sbjct: 287 ----------CE------PNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYT 330
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
++ K G++E+AEK++ D V +++ Y G ++ A + ++K
Sbjct: 331 LLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKV 390
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKP 424
G + + GY ++ KA E + K W KP
Sbjct: 391 GLKMNTVICNSLINGYCKLGHVNKAAEVLVSM-------KDWNLKP 429
>gi|224124604|ref|XP_002319373.1| predicted protein [Populus trichocarpa]
gi|222857749|gb|EEE95296.1| predicted protein [Populus trichocarpa]
Length = 810
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 133/295 (45%), Gaps = 15/295 (5%)
Query: 103 SVHDHAVQLDLIGKVRGLESAETYFNSLNDE----DKVDKLYGALLNCYVREGLVDESLS 158
V ++ V + GK + + A + F + + D+V Y +L+ + L+D++
Sbjct: 341 GVLEYNVMVKAYGKAKLYDKAFSLFKGMRNHGTWPDEVT--YNSLIQMFSGGDLMDQARD 398
Query: 159 LMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYG 218
L+ +M+E G L ++ +M Y GQ DV +M + GV P+ Y IN +
Sbjct: 399 LLDEMQEAGFKPQCLTFSAVMACYARLGQLSDAVDVYQEMVKAGVKPNEVVYGSLINGF- 457
Query: 219 ARSELSSMENVLQ--EMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS 276
+E+ ++E L+ M +S I + +++ Y G + A KK +D+
Sbjct: 458 --AEVGNVEEALKYFRMMEESGIPANQIVLTSLIKVYSKLGCFDGAKHLYKKMKDL-EGG 514
Query: 277 KDALGYNHLISHYASLGNKDEM-MKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEK 335
D + N +IS YA LG E + F L++ ++ + TM+ +G L+EA
Sbjct: 515 PDIIASNSMISLYADLGMISEAELVFKNLRENGQADGVS--FATMMYLYKSMGMLDEAID 572
Query: 336 MLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSII 390
+ EE + S D N ++ Y+ G + + +L E++ + P ++ I+
Sbjct: 573 IAEEMKQSGLLRDCVSYNKVMACYATNGQLRECAELLHEMIGQKLLPDGGTFKIL 627
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 147/346 (42%), Gaps = 54/346 (15%)
Query: 111 LDLIGKVRGL-ESAETYFNSLNDEDKVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGS 168
+DL GK L ++AE + L +D + + ++ GL+ E+ SL+ KM+E
Sbjct: 139 IDLYGKAGRLKDAAEVFSEMLKSGVAMDTITFNTMIFTCGSHGLLSEAESLLDKMEERRI 198
Query: 169 FGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMEN 228
YN + LY + G + ++ G+ PD S+R ++ R+ + +E
Sbjct: 199 SPDTRTYNIFLSLYADAGNINAALECYWKIRNVGLVPDIVSHRTILHILCGRNMVREVEA 258
Query: 229 VLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCE------------------ 270
V++EM+ S +D + + YI GL ++A L KC+
Sbjct: 259 VIEEMKKSSQ-KIDVHSVPGIIKMYINEGLHDRANNLLDKCQFDVGFSSKVRAAIIDAYA 317
Query: 271 ----------------DIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN 314
D++ K L YN ++ Y D K + L K
Sbjct: 318 ERGLWAEAEAVFYGKRDLLGPEKGVLEYNVMVKAYGKAKLYD---KAFSLFKGMRNHGTW 374
Query: 315 RDYITMLGSLVKI---GEL-EEAEKMLEEWELSCY---CYDFRVPNIILLGYSQKGMIEK 367
D +T SL+++ G+L ++A +L+E + + + C F + ++ Y++ G +
Sbjct: 375 PDEVT-YNSLIQMFSGGDLMDQARDLLDEMQEAGFKPQCLTF---SAVMACYARLGQLSD 430
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA---FECMKEA 410
A V +E+VK G P + + G+A+ N+E+A F M+E+
Sbjct: 431 AVDVYQEMVKAGVKPNEVVYGSLINGFAEVGNVEEALKYFRMMEES 476
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 86/189 (45%), Gaps = 15/189 (7%)
Query: 120 LESAETYFNSLNDEDKVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGI 178
+ AE F +L + + D + + ++ Y G++DE++ + ++MK+ G ++YN +
Sbjct: 533 ISEAELVFKNLRENGQADGVSFATMMYLYKSMGMLDEAIDIAEEMKQSGLLRDCVSYNKV 592
Query: 179 MCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI---CINSYGARSELSSMENVLQEMES 235
M Y GQ + ++L +M + PD +++I + G SE + ++ES
Sbjct: 593 MACYATNGQLRECAELLHEMIGQKLLPDGGTFKILFTVLKKGGFPSE------GIAQLES 646
Query: 236 QSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSK--SKDALGYNHLISHYASLG 293
+ + + + + + GL A L+ CE + D+ YN I Y S G
Sbjct: 647 AYLEGKPYARQAVITSIFSVVGLHALA---LESCESFTKAEVALDSFAYNVAIYAYGSSG 703
Query: 294 NKDEMMKFW 302
D+ +K +
Sbjct: 704 EIDKALKTF 712
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 19/158 (12%)
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKAD 369
K L Y T++ K G L++A ++ E S D N ++ G++ +A+
Sbjct: 128 KPCLTSTYNTLIDLYGKAGRLKDAAEVFSEMLKSGVAMDTITFNTMIFTCGSHGLLSEAE 187
Query: 370 AVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPK-----P 424
++L ++ ++ +P +++I + YAD N+ A EC +W+ + P
Sbjct: 188 SLLDKMEERRISPDTRTYNIFLSLYADAGNINAALEC------------YWKIRNVGLVP 235
Query: 425 SLVS--SILDWLGDNRDVEEVEAFVSSLKIKVQKRNMY 460
+VS +IL L V EVEA + +K QK +++
Sbjct: 236 DIVSHRTILHILCGRNMVREVEAVIEEMKKSSQKIDVH 273
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
YN ++ LY G+ + +V +M ++GV D ++ I + G+ LS E++L +M
Sbjct: 134 TYNTLIDLYGKAGRLKDAAEVFSEMLKSGVAMDTITFNTMIFTCGSHGLLSEAESLLDKM 193
Query: 234 ESQSHISMDWGTYSTVANYYIIAG 257
E + IS D TY+ + Y AG
Sbjct: 194 E-ERRISPDTRTYNIFLSLYADAG 216
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 117/289 (40%), Gaps = 62/289 (21%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP------- 192
YG L++ Y + GLV E+L ++ M+ G F + N ++ + + G+ +K
Sbjct: 13 YGMLVDVYAKAGLV-EALLWIKHMRLRGLFPDEVTMNTVVKVLKDVGEFDKAERFYKDWC 71
Query: 193 -----------DVLLDMKENG--VPPDNF------------------------------- 208
D +LD ENG P +F
Sbjct: 72 AGRVELDGLELDSMLD-SENGSRSEPVSFKHFLLTELFKTGGRVKIGGSSDEETLVRKPC 130
Query: 209 ---SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
+Y I+ YG L V EM +S ++MD T++T+ GL +A
Sbjct: 131 LTSTYNTLIDLYGKAGRLKDAAEVFSEM-LKSGVAMDTITFNTMIFTCGSHGLLSEAESL 189
Query: 266 LKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMK-FWGLQKIKCKKQLNRDYITMLGSL 324
L K E+ S D YN +S YA GN + ++ +W ++ + + + T+L L
Sbjct: 190 LDKMEE-RRISPDTRTYNIFLSLYADAGNINAALECYWKIRNVGLVPDI-VSHRTILHIL 247
Query: 325 VKIGELEEAEKMLEEWELSCYCYDFR-VPNIILLGYSQKGMIEKADAVL 372
+ E E ++EE + S D VP II + Y +G+ ++A+ +L
Sbjct: 248 CGRNMVREVEAVIEEMKKSSQKIDVHSVPGIIKM-YINEGLHDRANNLL 295
>gi|242058007|ref|XP_002458149.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
gi|241930124|gb|EES03269.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
Length = 795
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 86/422 (20%), Positives = 174/422 (41%), Gaps = 20/422 (4%)
Query: 59 QWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVR 118
Q + +G S E VI+ L K+++ A+ + + + G+ V + + + K
Sbjct: 354 QMIEQGLLPSTYEFNLVIKGLLRNKQWEDAIALFDLVVDTGVP-DVFTYGCLIHWLSKHH 412
Query: 119 GLESAETYFNSLNDEDKVDKLYG--ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYN 176
+ A ++ + + + +LL Y +G +DE+L L +M G + + Y
Sbjct: 413 KVHEAVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYT 472
Query: 177 GIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQ 236
+M Y +K +L +M +NGV ++Y I IN + ++ +L+ S+
Sbjct: 473 TLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSE 532
Query: 237 SHISMDWGTYSTVANYYIIAGLKEKAI-IYLKKCEDIVSKSKDALGYNHLISHYASLGNK 295
+ TY+++ N ++ AG+ A+ +Y + CE + + + + Y I Y
Sbjct: 533 GFVPTTM-TYNSIINGFVKAGMMGSALAMYRQMCEKGI--TPNIVTYTSFIDGYCRTNCC 589
Query: 296 DEMMKFWGLQKIKCKKQLNRD---YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVP 352
D +K L ++C ++ D Y + K G + A L + V
Sbjct: 590 DLAVKL--LIYMRCNG-IHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVY 646
Query: 353 NIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
N + GY M+ +A ++K+ ++ + G++ N+ A E E LA
Sbjct: 647 NSFVTGYKNLKMMAEASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLA 706
Query: 413 VHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSL-KIKVQKRNM-YHALTEAHIRS 470
H P +++ L + D++ + + + ++ V + Y+ L AHIR
Sbjct: 707 NHN-----IPDDKTFTALTHGLCRSGDIDGAKRLLDDMTRLDVCPNTVTYNMLINAHIRD 761
Query: 471 GQ 472
G+
Sbjct: 762 GK 763
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 136/348 (39%), Gaps = 61/348 (17%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
V+R + A+++ + M+G G+ +A+ + + K+R + A + +
Sbjct: 194 VMRACVVGRMHGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAG 253
Query: 135 --KVDKLYGALLNCYVREGLVDESLSLMQKM-----KEMGSFGSALNYNGIMCLYTNTGQ 187
D Y ++++ V+ G +DE+L L +M K+M F + G CL+ G+
Sbjct: 254 LKPRDFTYNSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGY-CLH---GE 309
Query: 188 HEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYS 247
K D+ + +GV P N +Y + I A + ++M Q + S
Sbjct: 310 IGKALDLFDEAVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLP------S 363
Query: 248 TVANYYIIAGLK-----EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNK-DEMMKF 301
T +I GL E AI D + D Y LI H+ S +K E +
Sbjct: 364 TYEFNLVIKGLLRNKQWEDAIALFDLVVD--TGVPDVFTYGCLI-HWLSKHHKVHEAVNL 420
Query: 302 WGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQ 361
W K E ++ ++C+ +LLGY +
Sbjct: 421 WDKMK---------------------------EAGVKPSIVTCHS--------LLLGYCE 445
Query: 362 KGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
KG +++A + E+ KG P +++ + GY K +KA+ + E
Sbjct: 446 KGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLNE 493
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 83/197 (42%), Gaps = 3/197 (1%)
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
M GV PD S + + + + + EM + + + D Y V ++
Sbjct: 144 MVTRGVVPDAKSRTDLLVATARGASAADALTLFDEMRCKGYYA-DAKMYDVVMRACVVGR 202
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
+ A+ + K + + Y I+ L + D ++ G + K + Y
Sbjct: 203 MHGDAVRLFDEMAGAGVKPDERV-YAITITGLCKLRDADRAVQVLGKMREAGLKPRDFTY 261
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSC-YCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
+++ LVK+G ++EA ++ ++ L+ D + ++ GY G I KA + E V
Sbjct: 262 NSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGYCLHGEIGKALDLFDEAV 321
Query: 377 KKGKTPTPNSWSIIAAG 393
+ G TPT +++++ G
Sbjct: 322 RDGVTPTNVTYTVLIKG 338
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 101/269 (37%), Gaps = 46/269 (17%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM-CLYTNTGQHEKIPDVLLDM 198
Y L+ EG+ DE+ L ++M E G S +N ++ L N + I L D+
Sbjct: 332 YTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQWEDAI--ALFDL 389
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
+ PD F+Y I+ ++ N+ +M+ AG+
Sbjct: 390 VVDTGVPDVFTYGCLIHWLSKHHKVHEAVNLWDKMKE--------------------AGV 429
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
K + C ++ LG Y G DE +K + K Y
Sbjct: 430 KPSIV----TCHSLL------LG-------YCEKGCMDEALKLYSEMPGKGFPPNEVTYT 472
Query: 319 TMLGSLVKIGELEEAEKMLEEWE---LSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
T++ +K ++A +L E +SC Y + NI++ G + + D +LK
Sbjct: 473 TLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTY---NILINGLCMVDRVCEVDEMLKRF 529
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
V +G PT +++ I G+ M A
Sbjct: 530 VSEGFVPTTMTYNSIINGFVKAGMMGSAL 558
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 106/239 (44%), Gaps = 3/239 (1%)
Query: 153 VDESLS-LMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYR 211
VDE+ L+ +M E G + YN ++ + GQ EK ++ L+M + G+PP+ +Y
Sbjct: 141 VDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYT 200
Query: 212 ICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCED 271
I+ + + V Q+M + + D GTY+ + + Y+ G K K ++ + +
Sbjct: 201 TVIDGLCKAQVVDRAKGVFQQMIDRG-VKPDNGTYNCLIHGYLSTG-KWKEVVQMLEEMS 258
Query: 272 IVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELE 331
D + Y L+ + G E F+ K K Y +L G L
Sbjct: 259 THGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALS 318
Query: 332 EAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSII 390
E L+ + + R+ NI+ Y++K MIE+A + ++ ++G +P S+ +
Sbjct: 319 EMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGAL 377
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 119/268 (44%), Gaps = 9/268 (3%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL-DM 198
Y L+ C+ R G ++ + + + G + + + ++ + + ++ D+LL M
Sbjct: 93 YSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLRM 152
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
E G PPD +Y IN + ++ N+ EM Q I + TY+TV + A +
Sbjct: 153 SEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQG-IPPNVVTYTTVIDGLCKAQV 211
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
++A ++ D K + YN LI Y S G E+++ L+++ L D I
Sbjct: 212 VDRAKGVFQQMIDRGVKPDNGT-YNCLIHGYLSTGKWKEVVQM--LEEMS-THGLEPDCI 267
Query: 319 T---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
T +L L K G EA + D + I+L GY+ KG + + + L +
Sbjct: 268 TYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLM 327
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKA 403
V G +P ++I+ YA K +E+A
Sbjct: 328 VGNGVSPNRRIFNIMFCAYAKKAMIEEA 355
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 150/355 (42%), Gaps = 10/355 (2%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
V Q + G K +I S ++K +Q+ E MS GL +A+ LD +
Sbjct: 218 VFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLC 277
Query: 116 KVRGLESAETYFNSLNDED-KVD-KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
K A +F+S+ + K D +Y LL+ Y +G + E S + M G +
Sbjct: 278 KNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRR 337
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
+N + C Y E+ + M++ G+ PD S+ I+ A +L +++ + +
Sbjct: 338 IFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALID---ALCKLGRVDDAVLQF 394
Query: 234 ESQSH--ISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYAS 291
+ ++ + +S++ G EKA + D DA+ +N L+ + +
Sbjct: 395 NQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLD-QGICVDAVFFNTLMCNLCN 453
Query: 292 LGNKDEMMKFWGLQKIKCKKQLNR-DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFR 350
G E + L I+ + N Y T++ G ++EA K+L+ + +
Sbjct: 454 EGRVMEAQRLIDLM-IRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEF 512
Query: 351 VPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
I+L GY + ++ A ++ +E++ KG TP +++ I G +A E
Sbjct: 513 TYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANE 567
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 130/294 (44%), Gaps = 23/294 (7%)
Query: 121 ESAETYFNSLNDEDKVDKLYGALLNC-YVREGLVDESLSLMQKMKEMGSFGSALNYNGIM 179
++ E +F L+ VD ++ L C EG V E+ L+ M +G + ++YN ++
Sbjct: 424 KAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLV 483
Query: 180 CLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHI 239
+ TG+ ++ +L M NG+ P+ F+Y I + Y + ++ +EM + +
Sbjct: 484 AGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKG-V 542
Query: 240 SMDWGTYSTVANYYIIAG-LKEKAIIYLKKCEDIVSKSK-DALGYNHLISHYASLGNKDE 297
+ TY+T+ + G E +YL I S++K D YN +++ DE
Sbjct: 543 TPVVATYNTILHGLFQTGRFSEANELYLNM---INSRTKCDIYTYNIILNGLCKNNFVDE 599
Query: 298 MMKFWGLQKIKCKKQLNRDYIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNI 354
K + + C K D +T M+G+L+K G E+A + +S Y VP++
Sbjct: 600 AFKMF---RRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFA--TISAYGL---VPDV 651
Query: 355 ILLGYSQKGMIEKA-----DAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
+ + +IE+ D + + K G P + + + + ++ +A
Sbjct: 652 VTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRA 705
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 54/306 (17%), Positives = 121/306 (39%), Gaps = 51/306 (16%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +++ + +VD + + Q+M + G YN ++ Y +TG+ +++ +L +M
Sbjct: 199 YTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMS 258
Query: 200 ENGVPPDNFS-----------------------------------YRICINSYGARSELS 224
+G+ PD + Y I ++ Y + LS
Sbjct: 259 THGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALS 318
Query: 225 SMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNH 284
M + L M +S + ++ + Y + E+A+ K S D + +
Sbjct: 319 EMHSFLDLMVGNG-VSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQ-QGLSPDVVSFGA 376
Query: 285 LISHYASLGNKDEMMKFWGLQKIKCKKQLNRD-------YITMLGSLVKIGELEEAEKML 337
LI LG D+ + ++ + +N + +++ L +G+ E+AE++
Sbjct: 377 LIDALCKLGRVDDAV-------LQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELF 429
Query: 338 EEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADK 397
E C D N ++ +G + +A ++ +++ G P S++ + AG+
Sbjct: 430 FEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLT 489
Query: 398 NNMEKA 403
+++A
Sbjct: 490 GRIDEA 495
>gi|302798617|ref|XP_002981068.1| hypothetical protein SELMODRAFT_420699 [Selaginella moellendorffii]
gi|300151122|gb|EFJ17769.1| hypothetical protein SELMODRAFT_420699 [Selaginella moellendorffii]
Length = 537
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 106/469 (22%), Positives = 204/469 (43%), Gaps = 66/469 (14%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
L++ + PL P V PV+ + E +KI + V+ +LR+ +R K AL + +W++
Sbjct: 106 ERLWNELLPLTIPSVG--PVVKLTIGEDRKIGLPGILYVVGKLRTFRRSKQALSILDWLA 163
Query: 97 GQGLAFSVHDHA---VQLDLIGKVRGLESAETYFNSLNDEDKV-DKLYGALLNCYVREGL 152
+ F D + + + + +V + AE F S+ E ++ +KL GA+ Y
Sbjct: 164 EEK-PFGEFDESLYKLHISIAFEVNSVHKAEKIFESVPKELQLQEKLLGAMAAGYA---- 218
Query: 153 VDESLSLMQKMKEM---GSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFS 209
S M K++E+ + + Y ++ LY ++K + +K + PD +
Sbjct: 219 ---SAHRMDKVEEILLQCNLSAMEPYTALIKLYFRVALYDKAASLYKRIKAAKLEPDLAA 275
Query: 210 YRICINSYGARSELSSMENV-LQEMESQSHISM-DWGTYSTVANYYIIAGLKEKAIIYLK 267
+ + E SS+E++ +E+E + +++ G Y I A + +A++
Sbjct: 276 FAALLR------EKSSLESLKPRELEEDAEVALHHAGAYEE--ELTIKAPVASQAMV--- 324
Query: 268 KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD---YITMLGSL 324
+S Y LG ++ K W + IK +K + Y+ + +
Sbjct: 325 ------------------VSGY--LGKAAQVSKLW--KHIKQEKSSSIPAVCYLNAIEAF 362
Query: 325 VKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTP 384
G++ AEK+ +E E++ Y + ++ YS+ M +KA+AV+ ++ G
Sbjct: 363 GAAGKVRSAEKVADEMEMAKSKY-VELSAAMIRVYSRNQMADKAEAVIDDLRANGVWNLF 421
Query: 385 NSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVE 444
+ + GY D N ++A + +K AL V K +P +++ +L RD E E
Sbjct: 422 RPHAELITGYLDSNQPDQAMKALKVALLV----KLMKPTYAVILKMLPVFERLRDAEGAE 477
Query: 445 AFVSSLKIKVQKRNMYHAL----TEAHIRSGQEVDGLLESMKADDIDED 489
V K R MY L A ++ +E++ L +K +DE+
Sbjct: 478 DMVMRYKGATDLR-MYKGLLRIYVSAKVKPLEEIEARL-MLKKIPLDEE 524
>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
Length = 822
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 145/345 (42%), Gaps = 26/345 (7%)
Query: 118 RGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNG 177
RGL +NS+ D AL C+ +++ ++++M G + +N
Sbjct: 303 RGLSPNVQIYNSVID---------ALCKCWS----ATQAMVILKQMFASGCDPDIITFNT 349
Query: 178 IMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS 237
++ + G K L + + P+ SY I+ + R EL + ++L EM +
Sbjct: 350 LITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRG 409
Query: 238 HISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDE 297
H + D T+ + + ++AG +A+I +K + D YN LIS L K
Sbjct: 410 H-TPDVVTFGALIHGLVVAGKVSEALIVREKMTE-RQVFPDVNIYNVLIS---GLCKKHM 464
Query: 298 MMKFWGLQKIKCKKQLNRD---YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNI 354
+ + + +K + D Y T++ ++ L +A K+ E E D N
Sbjct: 465 LPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNA 524
Query: 355 ILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVH 414
++ GY Q GM+ +A + + K G P +++ + +GYA + N+ A + + +
Sbjct: 525 MIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMI--- 581
Query: 415 EENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNM 459
+ +P SS+++ D + E ++++ + N+
Sbjct: 582 --KRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNV 624
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 126/291 (43%), Gaps = 39/291 (13%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
Y L++ Y R G + L L+ +M+ G + + Y ++ G EKI + L+M
Sbjct: 241 FYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEM 300
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
++ G+ P+ Y I++ + +L++M + S D T++T +I GL
Sbjct: 301 RKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFA-SGCDPDIITFNT-----LITGL 354
Query: 259 KEKAIIYLKKCEDIVSKS------KDALGYNHLISHYASLGN----KDEMMKFWGLQKIK 308
+ +++K E + ++ + L Y LI + G D +M+ G
Sbjct: 355 CHEG--HVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMG----- 407
Query: 309 CKKQLNRDYIT---MLGSLVKIGELEEA----EKMLEEWELSCYCYDFRVPNIILLGYSQ 361
+ D +T ++ LV G++ EA EKM E D + N+++ G +
Sbjct: 408 --RGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFP----DVNIYNVLISGLCK 461
Query: 362 KGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNM---EKAFECMKE 409
K M+ A +L+E+++K P ++ + G+ N+ K FE M+
Sbjct: 462 KHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEH 512
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/313 (20%), Positives = 133/313 (42%), Gaps = 11/313 (3%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L++ + G+ + + +KM+E G F + YN +M + G+ + + +M+
Sbjct: 236 YTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMR 295
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E GV + +Y I + + V+ +M+S I+ + TY+T+ + + G
Sbjct: 296 ERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDG-INPNLITYNTLIDGFCGVGKL 354
Query: 260 EKAIIYLKKCEDIVSK--SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
KA L C D+ S+ S + YN L+S + G+ K + + K Y
Sbjct: 355 GKA---LSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITY 411
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
++ + ++ +E+A ++ E D ++++ G+ KG + +A + K +V
Sbjct: 412 TILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVA 471
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDN 437
K P ++ + GY + + +A +E E K P + +++ L
Sbjct: 472 KKLEPNKVIYNTMVLGYCKEGSSYRALRLFREM-----EEKELPPNVASYRYMIEVLCKE 526
Query: 438 RDVEEVEAFVSSL 450
R +E E V +
Sbjct: 527 RKSKEAEGLVEKM 539
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/307 (19%), Positives = 134/307 (43%), Gaps = 38/307 (12%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNT------------ 185
+LY ++N YV+ +D S+S +M + G + +N ++ +
Sbjct: 95 RLYEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNE 154
Query: 186 ----------------------GQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSEL 223
G+ EK D+L++++E G P+ Y I+ R E+
Sbjct: 155 SKIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEI 214
Query: 224 SSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAI-IYLKKCEDIVSKSKDALGY 282
+++ EM ++ +W TY+ + + G+K++ +Y K ED V + Y
Sbjct: 215 EKAKDLFFEMGKFGLVANEW-TYTVLIHGLFKNGIKKQGFEMYEKMQEDGV--FPNLYTY 271
Query: 283 NHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWEL 342
N +++ + G + K + + + Y T++G L + + EA K++++ +
Sbjct: 272 NCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKS 331
Query: 343 SCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEK 402
+ N ++ G+ G + KA ++ +++ +G +P+ +++I+ +G+ K +
Sbjct: 332 DGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSG 391
Query: 403 AFECMKE 409
A + +KE
Sbjct: 392 AGKVVKE 398
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 142/322 (44%), Gaps = 29/322 (9%)
Query: 95 MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGL 152
M G+ + + +D K + + +A F +N + + Y +L+N G
Sbjct: 227 MRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGK 286
Query: 153 VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
V+E+ +L +M + + +N ++ + ++ ++ DM + G+ P+ +Y I
Sbjct: 287 VNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNI 346
Query: 213 CINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY-YIIAGLKEKAIIYLKKCED 271
I++Y + E +ME+ + I + G V+ Y +IAGL K L+ +
Sbjct: 347 LIDAY-CKDE--NMEDAF----ALYRIMLGKGVCPDVSTYNCLIAGLCRKG--DLEAARN 397
Query: 272 IVSK------SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD---YITMLG 322
+VS+ D + YN LI SL NK EM K L C+K L Y TM+
Sbjct: 398 LVSEMDTKHLKADLITYNILID---SLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMID 454
Query: 323 SLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTP 382
K G L A + + E + N+++ G+ +K +E A+ +L E+++KG P
Sbjct: 455 GYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIP 514
Query: 383 TPNSWSIIAAGYADKNNMEKAF 404
++ I+ + MEK F
Sbjct: 515 NRMTYEIVT-----EEMMEKGF 531
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 132/309 (42%), Gaps = 16/309 (5%)
Query: 171 SALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVL 230
S + N +M G+ + V +M + P S+ I IN +L+ +++
Sbjct: 127 SVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDII 186
Query: 231 QEMESQSHISMDWGTYSTVANYYIIAG-----LKEKAIIYLKKCEDIVSKSKDALGYNHL 285
++M+ + +S + TY+T+ + Y G K AI+ + + I + + +N L
Sbjct: 187 EDMKVRG-VSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICP---NEVTFNIL 242
Query: 286 ISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCY 345
I + N MK + + K Y +++ L G++ EA + ++ SC
Sbjct: 243 IDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCL 302
Query: 346 CYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
+ N +L G+ + M+++A + ++ K+G TP +++I+ Y NME AF
Sbjct: 303 KPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFA 362
Query: 406 CMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNM--YHAL 463
+ L K P S + ++ L D+E VS + K K ++ Y+ L
Sbjct: 363 LYRIMLG-----KGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNIL 417
Query: 464 TEAHIRSGQ 472
++ G+
Sbjct: 418 IDSLCNKGE 426
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 132/306 (43%), Gaps = 46/306 (15%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM---CLYTNTGQHEKIPDVLL 196
+ ++N + G ++++ +++ MK G + + YN ++ C G+ K +L
Sbjct: 166 FNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILK 225
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
+M+ +G+ P+ ++ I I+ + +S+ V EM Q + + TY+++ N
Sbjct: 226 EMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQG-VKPNVVTYNSLINGLCNN 284
Query: 257 G-------LKEKAIIYLKK-------------CEDIVSK--------------SKDALGY 282
G L+++ + K C++ + K + + Y
Sbjct: 285 GKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTY 344
Query: 283 NHLISHYASLGNKDEMMK-FWGLQKIKCKKQLNRD---YITMLGSLVKIGELEEAEKMLE 338
N LI Y KDE M+ + L +I K + D Y ++ L + G+LE A ++
Sbjct: 345 NILIDAYC----KDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVS 400
Query: 339 EWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKN 398
E + D NI++ KG ++KA +L E+ +KG P+ +++ + GY +
Sbjct: 401 EMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEG 460
Query: 399 NMEKAF 404
N+ A
Sbjct: 461 NLRAAL 466
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 101/240 (42%), Gaps = 13/240 (5%)
Query: 21 LEIFTRAYR-AVKP--VARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIR 77
+++F R VKP V N+L + + G + + T + DQ V K + + ++
Sbjct: 256 MKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEA-TALRDQMVNSCLKPNIITHNALLN 314
Query: 78 QLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVD 137
K K A ++ + M QG+ +V + + +D K +E A + + +
Sbjct: 315 GFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCP 374
Query: 138 KL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVL 195
+ Y L+ R+G ++ + +L+ +M + YN ++ N G+ +K +L
Sbjct: 375 DVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLL 434
Query: 196 LDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYII 255
+M G+ P +Y I+ Y L + N+ +ME G + VA Y ++
Sbjct: 435 DEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEK-------VGRLANVATYNVL 487
>gi|115444491|ref|NP_001046025.1| Os02g0170000 [Oryza sativa Japonica Group]
gi|49388067|dbj|BAD25179.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535556|dbj|BAF07939.1| Os02g0170000 [Oryza sativa Japonica Group]
Length = 397
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/323 (17%), Positives = 137/323 (42%), Gaps = 17/323 (5%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLN 145
A++V + M + + + +++ GK + S+ FN + + Y AL+N
Sbjct: 66 AVEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVN 125
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
+ REGL +++ + ++M++ G YN +M Y+ G + ++ M+ G P
Sbjct: 126 AFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEP 185
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
D SY I +++YG E V +E++ + G T+ ++ ++ ++
Sbjct: 186 DRASYNILVDAYGRAGLHEDAEAVFEELKQR-------GMSPTMKSHMLLLAAHARS-GN 237
Query: 266 LKKCEDIVSK------SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
+CE+++++ + D N +++ YA G D+M + + + + + Y
Sbjct: 238 ATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLFAAMERRGDADVG-TYNV 296
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
+ + + G + E D + Y+++ + +++E+V G
Sbjct: 297 AVNAYGRAGYVGRMEAAFAAVAARGLAADVVTWTARMGAYARRKEYGRCVGMVEEMVDAG 356
Query: 380 KTPTPNSWSIIAAGYADKNNMEK 402
P + ++ A +D+ +E+
Sbjct: 357 CYPDAGTARVLLAACSDERQVEQ 379
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 120/274 (43%), Gaps = 9/274 (3%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y LL Y G + + ++ +M+E G +A YN + EK +V MK
Sbjct: 15 YALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMK 74
Query: 200 ENGVPPDNFSYRICINSYG-ARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
+ ++ + IN YG A+ +SSM+ V EM+S + TY+ + N + GL
Sbjct: 75 RERCRANTETFTLMINVYGKAKQPMSSMK-VFNEMKSIG-CKPNICTYTALVNAFAREGL 132
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGL-QKIKCKKQLNRDY 317
EKA ++ + D YN L+ Y+ G + + L Q + C+ Y
Sbjct: 133 CEKAEEVFEEMQQ-AGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPD-RASY 190
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
++ + + G E+AE + EE + + ++L +++ G + + V+ ++ K
Sbjct: 191 NILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHK 250
Query: 378 KGKTPTPNSWSIIAAGYADK---NNMEKAFECMK 408
G TP + + + YA ++ME+ F M+
Sbjct: 251 SGLTPDTFALNAMLNAYARAGRLDDMERLFAAME 284
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 48/246 (19%), Positives = 100/246 (40%), Gaps = 12/246 (4%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+Y A L+ ++ ++++ + Q+MK + + ++ +Y Q V +M
Sbjct: 49 VYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEM 108
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
K G P+ +Y +N++ E V +EM+ H D Y+ + Y AGL
Sbjct: 109 KSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGH-EPDVYAYNALMEAYSRAGL 167
Query: 259 KEKA--IIYLKK---CEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQL 313
+ A I L + CE D YN L+ Y G ++ + K +
Sbjct: 168 PQGASEIFSLMQHMGCE------PDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPT 221
Query: 314 NRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
+ ++ +L + + G E+++ + S D N +L Y++ G ++ + +
Sbjct: 222 MKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLFA 281
Query: 374 EIVKKG 379
+ ++G
Sbjct: 282 AMERRG 287
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/371 (20%), Positives = 146/371 (39%), Gaps = 39/371 (10%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I L R AL + M +G +VH + V +D + K ++ A + ++++
Sbjct: 305 LIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKG 364
Query: 135 KVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+ + Y AL++ Y +EG++D++ ++ M+ + YN ++C + K
Sbjct: 365 LIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAM 424
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
+L M E + P +Y I+ ++L S +L M + W TYS +
Sbjct: 425 ALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQW-TYSVFIDT 483
Query: 253 YIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFW---------- 302
G E+A + K+ + + Y LI Y +G D
Sbjct: 484 LCKEGRVEEAGTLFDSVKAKGVKANEVI-YTALIDGYCKVGKIDVAYSLLERMLNDACLP 542
Query: 303 ----------GLQKIKCKKQLNR---------------DYITMLGSLVKIGELEEAEKML 337
GL K K K+ + Y ++G ++K G + A K+
Sbjct: 543 NSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVF 602
Query: 338 EEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADK 397
Y D L Y +GM+E+ D V+ ++ ++G P +++++ GYA
Sbjct: 603 NHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARL 662
Query: 398 NNMEKAFECMK 408
+AF+ +K
Sbjct: 663 GLTHRAFDFLK 673
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 80/394 (20%), Positives = 160/394 (40%), Gaps = 56/394 (14%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L++ G ++E+L L M E + Y ++ + +G+ + ++ +MK
Sbjct: 267 YTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMK 326
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E G P+ +Y + I+ +++ +L EM + I TY+ + + Y G+
Sbjct: 327 EKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIP-SVVTYNALIDGYCKEGMI 385
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
+ A L E S + YN LI L K ++ K L +++L+ IT
Sbjct: 386 DDAFEILDLMES-NSCGPNTRTYNELI---CGLCKKRKVHKAMALLNKMLERKLSPSLIT 441
Query: 320 ---MLGSLVKIGELEEAEKML----------EEWELSCY----CYDFRVP---------- 352
++ K+ +LE A ++L ++W S + C + RV
Sbjct: 442 YNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVK 501
Query: 353 -----------NIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNME 401
++ GY + G I+ A ++L+ ++ P +++++ G + M+
Sbjct: 502 AKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMK 561
Query: 402 KAFECMKEALAVHEENKFWRPKPSLVS-SIL--DWLGDNRDVEEVEAFVSSLKIKVQKR- 457
+A + + L + KP++V+ +IL + L D ++ F + + Q
Sbjct: 562 EASSLVAKMLTMG-------VKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDV 614
Query: 458 NMYHALTEAHIRSG--QEVDGLLESMKADDIDED 489
Y A A+ G +EVD ++ M + I D
Sbjct: 615 CTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPD 648
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 65/321 (20%), Positives = 125/321 (38%), Gaps = 41/321 (12%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+ +++G D +L + M +G Y + Y + G E++ DV+ M
Sbjct: 582 YTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMN 641
Query: 200 ENGVPPDNFSYRICINSY-------------------GARSELSSMENVLQEM------- 233
E G+ PD +Y + I+ Y G + L + +++ +
Sbjct: 642 EEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMK 701
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLG 293
E++S I +D + S Y I L EK + + + D Y LI+ +
Sbjct: 702 ETRSEIGID--SVSNTLEYEIALKLFEKMVEH--------GCTIDVSIYGALIAGFCQQE 751
Query: 294 NKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPN 353
+E K + Y ++L K+G EA ++++ +
Sbjct: 752 RLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYK 811
Query: 354 IILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAV 413
+++ G +G EKA AV ++ G +W ++ G ++ ++ EC E + +
Sbjct: 812 LLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVD---EC-SELIDI 867
Query: 414 HEENKFWRPKPSLVSSILDWL 434
EE K +P P S +++ L
Sbjct: 868 MEE-KGCQPNPLTYSLLIEGL 887
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 76/176 (43%), Gaps = 7/176 (3%)
Query: 237 SHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS--KDALGYNHLI-SHYASLG 293
+ IS + T++ + N Y G +A +Y K IV D Y LI H + G
Sbjct: 188 NQISPNIYTFNAMVNGYCKIGNVVEAELYASK---IVQAGLHPDTFTYTSLILGHCRNKG 244
Query: 294 NKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPN 353
+ F + + C++ Y ++ L + G + EA K+ + C R
Sbjct: 245 VDNAYEVFLIMPQKGCQRN-EVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYT 303
Query: 354 IILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
+++ S G +A + E+ +KG P ++++++ G +N M++A + + E
Sbjct: 304 VLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSE 359
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 160/396 (40%), Gaps = 78/396 (19%)
Query: 74 RVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQL-------------DLIGKV--R 118
R+++ LR + AL+V M G+ +V + L DL+ K+ R
Sbjct: 207 RILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQER 266
Query: 119 GLESAETYFNSL-NDEDKVDKL---------------------YGALLNCYVREGLVDES 156
G +E FN L N K +L Y L+ Y ++GL+ E+
Sbjct: 267 GCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEA 326
Query: 157 LSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINS 216
L+L ++M G + ++N IM + G+ L DM + + PD SY I
Sbjct: 327 LALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYG 386
Query: 217 YGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS 276
+ + +L E+ + ++S + TY+T+ + G E A LK ED++++
Sbjct: 387 FCRLGNIGEAFILLDELRFR-NLSFNIVTYNTLIDGLCRLGDLETA---LKLKEDMINRG 442
Query: 277 --KDALGYNHLISHYASLGNK-------DEMM-------------------------KFW 302
D + Y L++ LGN DEM+ K +
Sbjct: 443 IHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAF 502
Query: 303 GLQKIKCKKQLNRDYIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGY 359
LQ+ K D IT + L K+G LEEA ++L++ + D + +
Sbjct: 503 KLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAH 562
Query: 360 SQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYA 395
+ G + + + +++ +G+TPT +++++ +A
Sbjct: 563 MENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHA 598
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 125/271 (46%), Gaps = 16/271 (5%)
Query: 150 EGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFS 209
+ L+ ++L + + M E G + YN ++ + G+ ++ D++ M+E G P +
Sbjct: 215 KNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVT 274
Query: 210 YRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKC 269
+ + IN + EL + ++QEM +++ + + TY+ + Y GL +A L
Sbjct: 275 FNVLINGLSKKGELQQAKGLIQEM-AKAGLRVSPYTYNPLICGYCKKGLLVEA---LALW 330
Query: 270 EDIVSK--SKDALGYNHLISHYASLGNKDEMMKFWGLQKIK--CKKQLNRDYI---TMLG 322
E++V++ S +N ++ + G + Q++ KK L D I T++
Sbjct: 331 EEMVTRGVSPTVASHNTIMYGFCKEGKMSD-----ARQQLSDMLKKNLMPDIISYNTLIY 385
Query: 323 SLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTP 382
++G + EA +L+E ++ N ++ G + G +E A + ++++ +G P
Sbjct: 386 GFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHP 445
Query: 383 TPNSWSIIAAGYADKNNMEKAFECMKEALAV 413
+++++ G NM A E E L V
Sbjct: 446 DVVTYTVLVNGACKLGNMLMAKEFFDEMLHV 476
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/96 (20%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 121 ESAETYFNSLN-DEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM 179
E E +++ L+ + Y L++ + G +D +++ +M+E G + + YN ++
Sbjct: 570 EGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLI 629
Query: 180 CLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICIN 215
+ + ++ ++M+E G+ P+ ++Y I IN
Sbjct: 630 NGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILIN 665
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 157/357 (43%), Gaps = 15/357 (4%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
++ L+ Y ++G VD+++ + KM++ G +A+ Y ++ + +G+ E M
Sbjct: 373 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM 432
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
+ G+ P N Y I+ ++ E ++ EM + I ++ ++++ + +
Sbjct: 433 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG-ICLNTIFFNSIIDSHC---- 487
Query: 259 KEKAIIYLKKCEDIVSK---SKDALGYNHLISHYASLGNKDEMMKFW-GLQKIKCKKQLN 314
KE +I +K +++ + + + YN LI+ Y G DE MK G+ + K
Sbjct: 488 KEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPN-T 546
Query: 315 RDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
Y T++ KI +E+A + +E E S D NIIL G Q A +
Sbjct: 547 VTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVR 606
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWL 434
I + G ++++II G + A + M + L + + R ++ ++L +
Sbjct: 607 ITESGTQIELSTYNIILHGLCKNKLTDDALQ-MFQNLCLMDLKLEARTFNIMIDALLK-V 664
Query: 435 GDNRDVEEVEAFVSSLKIKVQKRNMYHALTEAHIRSG--QEVDGLLESMKADDIDED 489
G N + +++ SS + V Y + E I G +E+D L SM+ + D
Sbjct: 665 GRNDEAKDLFVAFSSNGL-VPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVD 720
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 123/312 (39%), Gaps = 57/312 (18%)
Query: 140 YGALLNCYVREGLVDESLS------------------------------------LMQKM 163
YG L+ C R G +D + ++++M
Sbjct: 90 YGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRM 149
Query: 164 KEMGSFGSALNYNGI---MCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGAR 220
E+G + +YN + +C + + ++ ++ D + G PPD SY IN +
Sbjct: 150 TELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKE 209
Query: 221 SELSSMENVLQEMESQSHISMDWGTYSTVANY-YIIAGL-KEKAIIYLKKCEDIVSKS-- 276
+ + EM +D G V Y IIA L K +A+ + + + K+
Sbjct: 210 GDSDKAYSTYHEM-------LDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 262
Query: 277 -KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT---MLGSLVKIGELEE 332
D + YN ++ Y S G E + F L+K++ + D +T ++ L K G E
Sbjct: 263 MPDCMTYNSILHGYCSSGQPKEAIGF--LKKMR-SDGVEPDVVTYSLLMDYLCKNGRCME 319
Query: 333 AEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAA 392
A K+ + + +L GY+ KG + + +L +V+ G P +SI+
Sbjct: 320 ARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILIC 379
Query: 393 GYADKNNMEKAF 404
YA + +++A
Sbjct: 380 AYAKQGKVDQAM 391
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 121/283 (42%), Gaps = 24/283 (8%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ++N + +EG D++ S +M + G + YN I+ +K +VL M
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMV 258
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+NGV PD +Y ++ Y + + L++M S + D TYS + +Y G
Sbjct: 259 KNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDG-VEPDVVTYSLLMDYLCKNGRC 317
Query: 260 EKAIIYLKKCEDIVSK---SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
+A +K D ++K + Y L+ YA+ G EM GL + + ++ D
Sbjct: 318 MEA----RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEM---HGLLDLMVRNGIHPD 370
Query: 317 YIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLG-----YSQKGMIEKA 368
+ ++ + K G++++A + + PN + G + G +E A
Sbjct: 371 HYVFSILICAYAKQGKVDQAMLVFSKMR-----QQGLNPNAVTYGAVIGILCKSGRVEDA 425
Query: 369 DAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
++++ +G +P ++ + G N E+A E + E L
Sbjct: 426 MLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML 468
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 124/280 (44%), Gaps = 32/280 (11%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+ ++++ + +EG V ES L + M +G + + YN ++ Y G+ ++ +L M
Sbjct: 478 FFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGM 537
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVL---QEMESQSHISMDWGTYSTVANYYI- 254
G+ P+ +Y IN Y ++S ME+ L +EMES S +S D TY+ +
Sbjct: 538 VSVGLKPNTVTYSTLINGY---CKISRMEDALVLFKEMES-SGVSPDIITYNIILQGLFQ 593
Query: 255 ---IAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNK---DEMMKFWGLQKIK 308
A KE +Y++ E S ++ L ++I H NK D + F L +
Sbjct: 594 TRRTAAAKE---LYVRITE---SGTQIELSTYNIILH-GLCKNKLTDDALQMFQNLCLMD 646
Query: 309 CKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSC-----YCYDFRVPNIILLGYSQKG 363
K + R + M+ +L+K+G +EA+ + + + + Y NII +G
Sbjct: 647 LKLE-ARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENII-----GQG 700
Query: 364 MIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
++E+ D + + G T + I + + +A
Sbjct: 701 LLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 740
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 104/241 (43%), Gaps = 6/241 (2%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+N Y G +DE++ L+ M +G + + Y+ ++ Y + E + +M+
Sbjct: 514 YNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEME 573
Query: 200 ENGVPPDNFSYRICINS-YGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
+GV PD +Y I + + R ++ E ++ ES + I + TY+ + + L
Sbjct: 574 SSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELS--TYNIILHGLCKNKL 631
Query: 259 KEKAI-IYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
+ A+ ++ C ++ +A +N +I +G DE + Y
Sbjct: 632 TDDALQMFQNLC--LMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTY 689
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
M +++ G LEE +++ E + D + N I+ Q+G I +A L I +
Sbjct: 690 RLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDE 749
Query: 378 K 378
K
Sbjct: 750 K 750
>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Cucumis sativus]
Length = 1079
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 161/380 (42%), Gaps = 27/380 (7%)
Query: 82 RKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYF------NSLNDEDK 135
+ RFK AL + M +G+ V + + +D + R SA+ Y N + ++
Sbjct: 223 KGRFKFALVLIHHMECKGIQADVCTYNMFIDSL--CRNSRSAQGYLVLKKMRNKMITPNE 280
Query: 136 VDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVL 195
V Y L+N +V+EG + + + +M E+ + + YN ++ Y G E+ VL
Sbjct: 281 VS--YNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVL 338
Query: 196 LDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYII 255
M+ N V P+ + +N ++ N+L E + S++ +++ + +
Sbjct: 339 DVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNIL-ERYCINRTSLNCISHTVMIDGLCR 397
Query: 256 AGLKEKAI-IYLKKCEDIVSKSKDALGYNHLISHYASLGN----KDEMMKFWGLQKIKCK 310
GL ++A + ++ C+D V D + ++ LI+ + +GN K+ M K + +
Sbjct: 398 NGLLDEAFQLLIEMCKDGV--HPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPN- 454
Query: 311 KQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADA 370
N + T++ + K+G + EA K L+ D N ++ + G + +A+
Sbjct: 455 ---NVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEE 511
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSI 430
L I + G P ++ I GYA+ + AF ++ P P S+
Sbjct: 512 FLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHH-----PSPFTYGSL 566
Query: 431 LDWLGDNRDVEEVEAFVSSL 450
L L ++ E + L
Sbjct: 567 LKVLCKGQNFWEARKLLKKL 586
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 116/298 (38%), Gaps = 46/298 (15%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
++ L+ Y+R+G+V +++ M G S N IM + + M
Sbjct: 107 VFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSFFKQM 166
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
+ V P+ S+ I I+ + +L N+L ME ++ +Y+T+ ++ G
Sbjct: 167 LTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVP-TIVSYNTLLSWCCKKGR 225
Query: 259 KEKAIIYLK--KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
+ A++ + +C+ I D YN I N + L+K++
Sbjct: 226 FKFALVLIHHMECKGI---QADVCTYNMFIDSLCR--NSRSAQGYLVLKKMR-------- 272
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
KM+ E+S N ++ G+ ++G I A V E++
Sbjct: 273 -----------------NKMITPNEVS--------YNTLINGFVKEGKIGVATRVFNEMI 307
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWL 434
+ +P +++I+ GY N E+A L V E N RP + ++L+ L
Sbjct: 308 ELNLSPNLITYNILINGYCINGNFEEAL----RVLDVMEANDV-RPNEVTIGTLLNGL 360
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/376 (19%), Positives = 164/376 (43%), Gaps = 10/376 (2%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAV---QLD 112
VL + + G + + + +I + A+++ + M +G +VH +++ L
Sbjct: 148 VLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLC 207
Query: 113 LIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
+GK + + + E V +Y +++ ++ LV+E++ + KMK G +
Sbjct: 208 RVGKTTEVIKLLEHMKVVGCEPDV-VIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTV 266
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQE 232
+ Y ++ N G+ ++ +L +MK + PD ++ + I+ E+S +L+
Sbjct: 267 VTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKT 326
Query: 233 MESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSK--DALGYNHLISHYA 290
M ++ + D TY+T+ N Y L+ + + K E ++SK + D ++ L++ Y
Sbjct: 327 M-TEMGVEPDVATYNTLMNGYC---LRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYC 382
Query: 291 SLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFR 350
DE + + + Y T++ L + EAE++ ++ + Y +
Sbjct: 383 KAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLV 442
Query: 351 VPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEA 410
+I+L S++G +++A + + + G P +++I+ G + A E E
Sbjct: 443 TYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAEL 502
Query: 411 LAVHEENKFWRPKPSL 426
+ W P++
Sbjct: 503 SVKGLQPNNWVCTPTI 518
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 119/269 (44%), Gaps = 18/269 (6%)
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM---CLYTNTGQHEKIPDVLLDMK 199
L+NC+ R VD S++ K+ ++G + + ++ ++ C+ G+ ++ DV M
Sbjct: 132 LINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDV---MV 188
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G P+ SY I I + + + +L+ M+ D Y+T+ + L
Sbjct: 189 ARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVG-CEPDVVIYNTIVDRLCKDRLV 247
Query: 260 EKAI-IYLK-KCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
+A+ I+ K K I+ + Y LI +LG E F L ++K + D
Sbjct: 248 NEAVHIFCKMKGTGILPT---VVTYTSLIHGLRNLGRWKE--AFGLLNEMK-GGNIMPDL 301
Query: 318 I---TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
+ ++ + K GE+ EA +L+ D N ++ GY + + +A V +
Sbjct: 302 VAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEV 361
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
++ KG+ P S+SI+ GY +++A
Sbjct: 362 MISKGRMPDVFSFSILVNGYCKAKRIDEA 390
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 140/327 (42%), Gaps = 41/327 (12%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLN 145
AL+V + M G G V + L+ + K R L AE N + + L + L++
Sbjct: 350 ALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIH 409
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
Y EG +D++L L M + YN ++ G +K D+ DM + P
Sbjct: 410 GYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFP 469
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
++ +Y I I+S+ + ++ L EM ++ I + TY+++ Y +G K +
Sbjct: 470 NHVTYSILIDSHCEKGQVEDAFGFLDEMINKG-ILPNIMTYNSIIKGYCRSGNVSKGQKF 528
Query: 266 LKKCEDIVSK-SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSL 324
L+K +V+K S D + YN LI Y +D+M + L + K+++ D +T
Sbjct: 529 LQKM--MVNKVSPDLITYNTLIHGYI---KEDKMHDAFKLLNMMEKEKVQPDVVTY---- 579
Query: 325 VKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTP 384
N+++ G+S G +++A + +++ KG P
Sbjct: 580 ----------------------------NMLINGFSVHGNVQEAGWIFEKMCAKGIEPDR 611
Query: 385 NSWSIIAAGYADKNNMEKAFECMKEAL 411
++ + G+ N ++AF+ E L
Sbjct: 612 YTYMSMINGHVTAGNSKEAFQLHDEML 638
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/363 (20%), Positives = 152/363 (41%), Gaps = 29/363 (7%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ +++ R G + +++L+ M G + YN ++ +G +K +V +M
Sbjct: 194 HNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMD 253
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ GV PD S+ I I + E+ + +EM + I D ++S + + G
Sbjct: 254 DFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRG-IKPDLVSFSCLIGLFARRGKM 312
Query: 260 EKAIIYLK--KCEDIVSKSKDALGYNHLISHYASLG-------NKDEMMKFWGLQKIKCK 310
+ A+ YL+ +C +V D + Y +I + G +DEM+ L +
Sbjct: 313 DHAMAYLREMRCFGLVP---DGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVV-- 367
Query: 311 KQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADA 370
Y T+L L K L +AE +L E D ++ GY +G ++KA
Sbjct: 368 -----TYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQ 422
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSI 430
+ ++ + P +++ + G + +++KA + + +H F P S +
Sbjct: 423 LFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDD---MHSREIF--PNHVTYSIL 477
Query: 431 LDWLGDNRDVEEVEAFVSSLKIKVQKRNM--YHALTEAHIRSGQEVDG--LLESMKADDI 486
+D + VE+ F+ + K N+ Y+++ + + RSG G L+ M + +
Sbjct: 478 IDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKV 537
Query: 487 DED 489
D
Sbjct: 538 SPD 540
>gi|358345906|ref|XP_003637015.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|358347053|ref|XP_003637577.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502950|gb|AES84153.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503512|gb|AES84715.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 823
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 155/331 (46%), Gaps = 19/331 (5%)
Query: 79 LRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED--K 135
L+ + +K AL + EW +G +V + + ++GK R E+ +N +N+
Sbjct: 116 LKEQVCWKRALMIFEWFKKKGCYELNVIHYNIMFWILGKERKWRVLESLWNEMNENGVVP 175
Query: 136 VDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVL 195
V+ YG L++ Y + GL++E+L+ + +M+ G + ++ LY G+ +K +
Sbjct: 176 VNSTYGTLIDVYSKGGLIEEALAWLLRMQSEGMEPDEVTMGVVVQLYKRAGEFQKAEEFF 235
Query: 196 LDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYII 255
L G P RI I+ A + +V E+ S ++ ++ TY+T+ + Y
Sbjct: 236 LRWSR-GEP-----LRIEIDHNPADTR----RHVCNEV-SHVNVCLNSHTYNTLIDTYGK 284
Query: 256 AG-LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWG-LQKIKCKKQL 313
AG ++ I+ + + V + + +N +I Y + G E+ +++++C
Sbjct: 285 AGQIRVVYEIFARMIKQGVVLT--TVTFNTMIHLYGNHGRIREVSSLLKRMEELRCLPD- 341
Query: 314 NRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
R Y ++ LVK + A K + + + D +L YS + M+++A+ +++
Sbjct: 342 TRTYNILISVLVKHNNINLATKYFAKMKEAFLEPDVVSYRTLLYAYSTRKMVQEAEEIVQ 401
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
E+ ++G + S + Y + N +EK++
Sbjct: 402 EMDERGLKIDEFTQSALTRMYVESNMLEKSW 432
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Query: 85 FKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYGALL 144
K A ++ + SV +DL + +E A+ F SL ++ A++
Sbjct: 636 LKEAQEIYTLLQSSDQGPSVFSSNCMIDLYTERLMVEQAKEIFESLKKNSIANEFSYAMM 695
Query: 145 NC-YVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
C Y + G +DE+ + ++M ++G L+YN ++ LY+ + + +M E+G+
Sbjct: 696 LCMYKKIGRLDEAFQIAKEMGKLGFLTDLLSYNNVLGLYSMDRRLWEAKKTFKEMIESGI 755
Query: 204 PPDNFSYR 211
PD+F++R
Sbjct: 756 QPDDFTFR 763
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 76/181 (41%), Gaps = 3/181 (1%)
Query: 90 QVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV--DKLYGALLNCY 147
V +S + + H + +D GK + F + + V + +++ Y
Sbjct: 258 HVCNEVSHVNVCLNSHTYNTLIDTYGKAGQIRVVYEIFARMIKQGVVLTTVTFNTMIHLY 317
Query: 148 VREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDN 207
G + E SL+++M+E+ YN ++ + MKE + PD
Sbjct: 318 GNHGRIREVSSLLKRMEELRCLPDTRTYNILISVLVKHNNINLATKYFAKMKEAFLEPDV 377
Query: 208 FSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLK 267
SYR + +Y R + E ++QEM+ + + +D T S + Y+ + + EK+ ++
Sbjct: 378 VSYRTLLYAYSTRKMVQEAEEIVQEMDERG-LKIDEFTQSALTRMYVESNMLEKSWLWFM 436
Query: 268 K 268
+
Sbjct: 437 R 437
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 87/198 (43%), Gaps = 5/198 (2%)
Query: 95 MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSL--NDEDKVDKLYGALLNCYVREGL 152
M GL + + GK+ L AE +N + +D + ++GAL+N +
Sbjct: 541 MQVAGLVSDCIPYCAVISSFGKLGQLNMAEGLYNEMIGHDVEPDAIIFGALINAFADVAN 600
Query: 153 VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
V ++ S + +M++ G G+ +N +M LYT G ++ ++ ++ + P FS
Sbjct: 601 VKKANSYVDRMRKAGFIGNQAIHNTLMKLYTKLGYLKEAQEIYTLLQSSDQGPSVFSSNC 660
Query: 213 CINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDI 272
I+ Y R + + + + ++ S I+ ++ + Y I L E + K
Sbjct: 661 MIDLYTERLMVEQAKEIFESLKKNS-IANEFSYAMMLCMYKKIGRLDEA--FQIAKEMGK 717
Query: 273 VSKSKDALGYNHLISHYA 290
+ D L YN+++ Y+
Sbjct: 718 LGFLTDLLSYNNVLGLYS 735
Score = 38.1 bits (87), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 126/332 (37%), Gaps = 44/332 (13%)
Query: 64 GQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESA 123
G+K LE ++V + RK+ L + + G+ + +D A QL K G+ +
Sbjct: 457 GEKGYTLEAEKVFMCCKERKKLS-VLVFNVMIKAYGIG-NCYDKACQLFDCMKKFGVAAN 514
Query: 124 ETYFNSL------NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNG 177
E ++SL D+ + K Y + KM+ G + Y
Sbjct: 515 ECSYSSLIHILASADKPHIAKPY-------------------LNKMQVAGLVSDCIPYCA 555
Query: 178 IMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS 237
++ + GQ + +M + V PD + IN++ + + + + M
Sbjct: 556 VISSFGKLGQLNMAEGLYNEMIGHDVEPDAIIFGALINAFADVANVKKANSYVDRMRKAG 615
Query: 238 HISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVS------KSKDALGYNHLISHYAS 291
I + ++T+ Y G YLK+ ++I + + N +I Y
Sbjct: 616 FIG-NQAIHNTLMKLYTKLG-------YLKEAQEIYTLLQSSDQGPSVFSSNCMIDLYTE 667
Query: 292 -LGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFR 350
L + F L+K + + Y ML KIG L+EA ++ +E + D
Sbjct: 668 RLMVEQAKEIFESLKKNSIANEFS--YAMMLCMYKKIGRLDEAFQIAKEMGKLGFLTDLL 725
Query: 351 VPNIILLGYSQKGMIEKADAVLKEIVKKGKTP 382
N +L YS + +A KE+++ G P
Sbjct: 726 SYNNVLGLYSMDRRLWEAKKTFKEMIESGIQP 757
>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
Length = 420
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 132/306 (43%), Gaps = 20/306 (6%)
Query: 118 RGLESAETYFNS--LNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNY 175
RG+ S+ + LN +D Y +N ++G + E++ + ++M+E GS + Y
Sbjct: 70 RGIPSSLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTY 129
Query: 176 NGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMES 235
N ++ Q E ++ +M+ G P +Y I+ + + + ++L EME
Sbjct: 130 NILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEH 189
Query: 236 QSHISMDWGTYSTVANYYIIAGLKEKAIIYLKK--------CEDIVSKSKDALGYNHLIS 287
+ I+ + TY+ + G E+AI+ LK+ C ++V+ Y LI
Sbjct: 190 RG-ITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVT-------YTQLIH 241
Query: 288 HYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEW-ELSCYC 346
G + M+F I N Y ++ L + G EA +L E + C
Sbjct: 242 GLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCE- 300
Query: 347 YDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFEC 406
D + N ++ G + G ++ A + +V+KG P +++ + G D +++A
Sbjct: 301 LDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGL 360
Query: 407 MKEALA 412
M+E A
Sbjct: 361 MQEMRA 366
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 41/77 (53%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +L+ GL+DE+L LMQ+M+ G +++ Y ++ +T + + ++ +MK
Sbjct: 341 YTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMK 400
Query: 200 ENGVPPDNFSYRICINS 216
NG+ P Y+I S
Sbjct: 401 SNGLMPAGDIYKILFKS 417
>gi|356541064|ref|XP_003539003.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 703
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 167/354 (47%), Gaps = 27/354 (7%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGL----ESAETYFNSL 130
I L S R++ A +V E M + + DH ++ +R L + A +F +
Sbjct: 266 AISGLLSSARYEDAWKVYESMEADNV---LPDHVTCSIMVIVMRKLGHSAKDAWQFFEKM 322
Query: 131 NDEDKV--DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQH 188
N + +++ GAL+ + EGL+ E+L ++ ++++ G + + YN +M Y + +
Sbjct: 323 NGKGVKWGEEVLGALIKSFCVEGLMSEALIILSELEKKGVSSNTIVYNTLMDAYCKSNRV 382
Query: 189 EKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYST 248
E+ + ++MK G+ P ++ I + +Y + + +E ++ EM+ ++ + + +Y+
Sbjct: 383 EEAEGLFVEMKTKGIKPTEATFNILMYAYSRKMQPEIVEKLMAEMQ-ETGLKPNAKSYTC 441
Query: 249 VANYY----IIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLG-NKDEMMKFWG 303
+ + Y ++ + A + +KK D + + + Y LI Y+ G ++ F
Sbjct: 442 IISAYGKQKNMSDMAADAFLKMKK--DGIKPTSHS--YTALIHAYSVSGWHEKAYAAFEN 497
Query: 304 LQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCY--CYDFRVP-NIILLGYS 360
+Q+ K + Y +L + + G + + +++ W+L RV N ++ G++
Sbjct: 498 MQREGIKPSIE-TYTALLDAFRRAG---DTQTLMKIWKLMRREKVEGTRVTFNTLVDGFA 553
Query: 361 QKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVH 414
+ G ++A V+ + G PT +++++ YA K E ++E +A H
Sbjct: 554 KHGYYKEARDVISKFANVGLHPTVMTYNMLMNAYARGGRHSKLPELLEE-MAAH 606
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 73/172 (42%), Gaps = 13/172 (7%)
Query: 87 HALQVSEW----------MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE--D 134
HA VS W M +G+ S+ + LD + ++ + + E +
Sbjct: 480 HAYSVSGWHEKAYAAFENMQREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMRREKVE 539
Query: 135 KVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDV 194
+ L++ + + G E+ ++ K +G + + YN +M Y G+H K+P++
Sbjct: 540 GTRVTFNTLVDGFAKHGYYKEARDVISKFANVGLHPTVMTYNMLMNAYARGGRHSKLPEL 599
Query: 195 LLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTY 246
L +M + + PD+ +Y I ++ + S QEM + MD +Y
Sbjct: 600 LEEMAAHNLKPDSVTYSTMIYAFLRVRDFSQAFFYHQEMVKSGQV-MDVDSY 650
>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Glycine max]
Length = 827
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 123/278 (44%), Gaps = 8/278 (2%)
Query: 137 DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
D + +++N + G V E+ + + +++ YN I+ Y G + V
Sbjct: 536 DYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYR 595
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
+M + + P+ +Y IN + +++ + +M+ + + +D Y+T+ +
Sbjct: 596 EMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKG-LELDITVYATLIAGFCKM 654
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGL---QKIKCKKQL 313
E A + K + V + + + YN +IS Y +L N + + KI C ++
Sbjct: 655 QDMENACKFFSKLLE-VGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKI 713
Query: 314 NRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
Y +++ L+K G+L A + E D + N+++ G G +E A +LK
Sbjct: 714 ---YTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILK 770
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
E+ TPT ++ + AG+ + N+++AF E L
Sbjct: 771 EMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEML 808
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 122/268 (45%), Gaps = 16/268 (5%)
Query: 151 GLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSY 210
G V+E+ +L KM G S ++YN ++ + G + +V+ + E+G+ P+ +Y
Sbjct: 445 GKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITY 504
Query: 211 RICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG----LKEKAIIYL 266
I + + + N+ +M + + D+ T++++ N G ++K ++
Sbjct: 505 TILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDY-TFNSIINGLCKVGRVSEARDKLNTFI 563
Query: 267 KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT---MLGS 323
K+ S ++ YN +I Y G D + + C+ +++ + IT ++
Sbjct: 564 KQ-----SFIPTSMTYNCIIDGYVKEGAIDSAESVY---REMCRSEISPNVITYTSLING 615
Query: 324 LVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPT 383
K +++ A KM ++ + D V ++ G+ + +E A ++++ G TP
Sbjct: 616 FCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPN 675
Query: 384 PNSWSIIAAGYADKNNMEKAFECMKEAL 411
++I+ + Y + NNME A KE +
Sbjct: 676 TIVYNIMISAYRNLNNMEAALNLHKEMI 703
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y ++G+ V++G EA ++ +E S + V ++ GY +G + A + E+V
Sbjct: 295 YAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVV 354
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
+ G TP +S++ + N+EKA E
Sbjct: 355 EVGVTPNVAIFSVLIEWCSKIGNVEKANE 383
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/355 (19%), Positives = 150/355 (42%), Gaps = 15/355 (4%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
YG L++ + G ++++ L QK+ G S + Y ++ + ++ DM
Sbjct: 13 YGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMN 72
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G PP +Y + I++ R L +++++M H+ D TY+TV + +G
Sbjct: 73 RRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVP-DVVTYNTVMDGLCKSGRV 131
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
E+A++ + E + + + +N +I D+ + + + + + Y
Sbjct: 132 EEALLLFNEMERL-GCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGI 190
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
++ L K G+L EA K+ S N+++ G +++A + K + KG
Sbjct: 191 LIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKG 250
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRD 439
P+ +++I+ + + M++AF +K + P S+++ L
Sbjct: 251 CRPSRFTFNILIDAHCKRGKMDEAFRLLKRM-----TDDGHVPDVVTYSTLISGLCSIAR 305
Query: 440 VEEVEAFVSSL------KIKVQKRNMYHALTEA-HIRSGQEV-DGLLESMKADDI 486
V++ + + V + + H L +A I+ +EV D ++ S ++ D+
Sbjct: 306 VDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/368 (20%), Positives = 155/368 (42%), Gaps = 46/368 (12%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+IR L R R +AL V + M + V + + L+ K G + A + + D+
Sbjct: 164 LIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKG 223
Query: 135 KVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+ Y ++N +EG VD+++ ++ + G + ++YN ++ + E
Sbjct: 224 CTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAE 283
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
+++ +M + G PP NV+ T++ + ++
Sbjct: 284 ELMGEMGQKGCPP----------------------NVV--------------TFNMLISF 307
Query: 253 YIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIK-CKK 311
GL E A+ L++ + ++L YN L+ + D+ M F L + C
Sbjct: 308 LCRKGLVEPALEVLEQIPK-YGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYP 366
Query: 312 QLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAV 371
+ Y T+L +L + GE++ A ++L + + N ++ G ++ G ++A +
Sbjct: 367 DIV-SYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALEL 425
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSIL 431
L E+V KG P ++S IAAG ++ +E A + ++ RP L ++I+
Sbjct: 426 LNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKV-----QDMGIRPNTVLYNAII 480
Query: 432 DWLGDNRD 439
L R+
Sbjct: 481 LGLCKRRE 488
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 98/265 (36%), Gaps = 40/265 (15%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y A++ Y G +D + L+ EM A YN ++ G+ VL +M
Sbjct: 129 YNAMVAGYCGAGQLDAARRLVA---EMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEML 185
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
PD +Y I + + RS +L EM + + D TY+ V N G
Sbjct: 186 RRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKG-CTPDIVTYNVVVNGICQEGRV 244
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
+ AI +LK L C+ Y
Sbjct: 245 DDAIEFLKN-----------------------------------LPSYGCEPN-TVSYNI 268
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
+L L E+AE+++ E + N+++ +KG++E A VL++I K G
Sbjct: 269 VLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYG 328
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAF 404
TP S++ + + + M+KA
Sbjct: 329 CTPNSLSYNPLLHAFCKQKKMDKAM 353
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 50/271 (18%), Positives = 114/271 (42%), Gaps = 39/271 (14%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ L++ R+GLV+ +L +++++ + G ++L+YN ++ + + +K L M
Sbjct: 301 FNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV 360
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY-YIIAGL 258
G PD SY + + E+ +L +++ D G + +Y +I GL
Sbjct: 361 SRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLK-------DKGCAPVLISYNTVIDGL 413
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
+ K+K+AL L++ S G + +++ + + C++ D I
Sbjct: 414 TK------------AGKTKEAL---ELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAI 458
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
G + +G + + N I+LG ++ A + ++
Sbjct: 459 RAFGKVQDMGIRP----------------NTVLYNAIILGLCKRRETHSAIDLFAYMIGN 502
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
G P ++++I+ G A + +++A + + E
Sbjct: 503 GCMPNESTYTILIEGLAYEGLIKEARDLLDE 533
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 128/280 (45%), Gaps = 16/280 (5%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L++ +EG V E+ +++ M + + Y+ +M Y + +K V M
Sbjct: 272 YNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMS 331
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL- 258
GV PD SY I IN + + N+ +EM Q ++ TYS+ +I GL
Sbjct: 332 LMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMH-QKNMVPGIVTYSS-----LIDGLC 385
Query: 259 KEKAIIYLKKCEDIVSKSKD------ALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQ 312
K I Y+ D++ + +D + YN LI G+ D + + K + +
Sbjct: 386 KSGRISYV---WDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRP 442
Query: 313 LNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
+ + +L L K G L++A++ ++ Y D N+++ G+ ++G++E+A +L
Sbjct: 443 CSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTML 502
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
++ + G P ++ II K+ +KA + +++ +
Sbjct: 503 SKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMIC 542
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/361 (17%), Positives = 151/361 (41%), Gaps = 8/361 (2%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLD--- 112
VL + + G + + +I+ L + + AL + + QG+ F + ++
Sbjct: 116 VLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVC 175
Query: 113 LIGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
IG RG + + V+ +Y +++ + LV E+ L +M G
Sbjct: 176 KIGDTRGAIKLVRKIDGRLTKPNVE-MYNTIIDALCKYQLVSEAYGLFSEMTAKGISADV 234
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQE 232
+ Y ++ + + ++ +L +M + P+ ++Y I +++ ++ +NVL
Sbjct: 235 VTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAV 294
Query: 233 MESQSHISMDWGTYSTVAN-YYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYAS 291
M ++ + D TYST+ + Y+++ LK+ ++ ++ + D Y LI+ +
Sbjct: 295 M-LKACVKPDVITYSTLMDGYFLVYELKKAQHVF--NAMSLMGVTPDVHSYTILINGFCK 351
Query: 292 LGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRV 351
DE + + K Y +++ L K G + +++E +
Sbjct: 352 NKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVIT 411
Query: 352 PNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
N ++ G + G +++A A+ ++ +G P +++I+ G ++ A E ++ L
Sbjct: 412 YNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLL 471
Query: 412 A 412
Sbjct: 472 T 472
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 113/251 (45%), Gaps = 7/251 (2%)
Query: 159 LMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV---PPDNFSYRICIN 215
L+Q+M E+G ++YN ++ N + E+ ++L M ++ V PP+ SY IN
Sbjct: 152 LLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVIN 211
Query: 216 SYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA-IIYLKKCEDIVS 274
+ ++ N+ EM + I D TY+TV + A L ++A ++ + ++ V
Sbjct: 212 GFFTEGQVDKPYNLFLEMMDRG-IPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVK 270
Query: 275 KSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
+ D YN LI Y S+G E+++ K Y ++L L K G EA
Sbjct: 271 PNIDT--YNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREAR 328
Query: 335 KMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGY 394
+ I+L GY+ KG + + +L +V G +P + ++I + Y
Sbjct: 329 FFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAY 388
Query: 395 ADKNNMEKAFE 405
A ++KA +
Sbjct: 389 AKCGIIDKAMD 399
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 149/358 (41%), Gaps = 49/358 (13%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE-------------- 133
A+ + M QGL+ + +D + K+ ++ AE FN + +E
Sbjct: 397 AMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVY 456
Query: 134 --------DKVDKLYGALLNCYV---------------REGLVDESLSLMQKMKEMGSFG 170
+KV++L+ +LN + +EG V E L+ ++ MG
Sbjct: 457 GLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRP 516
Query: 171 SALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVL 230
++YN ++ + G ++ +L M G+ PD+FSY ++ Y + S +
Sbjct: 517 DVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHF 576
Query: 231 QEMESQSHISMDWGTYSTVAN-YYIIAGLKEKAIIYLKKCEDIVSKSK-DALGYNHLISH 288
++M S I+ TY+T+ + + E +YL I S +K D YN +++
Sbjct: 577 RKMLSNG-ITPGVVTYNTILHGLFQTKRFSEAKELYLNM---INSGTKWDIYTYNIILNG 632
Query: 289 YASLGNKDEMMKFWGLQKIKCKKQLNRDYIT---MLGSLVKIGELEEAEKMLEEWELSCY 345
DE +K + Q + C K L + IT M+G+L+K G E+A + +
Sbjct: 633 LCKSNCVDEAIKMF--QNL-CSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGL 689
Query: 346 CYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
+ +++ ++G +E+ D++ + K G P + + + ++ +A
Sbjct: 690 VQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRA 747
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 104/254 (40%), Gaps = 5/254 (1%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALN---YNGIMCLYTNTGQHEKIPDVLL 196
Y LL E +E+L L+ M + + N Y+ ++ + GQ +K ++ L
Sbjct: 168 YNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFL 227
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
+M + G+PPD +Y I+ E V Q+M + + TY+ + + Y+
Sbjct: 228 EMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNG-VKPNIDTYNCLIHGYLSI 286
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
G K K ++ + + + Y L+++ G E F+ K K
Sbjct: 287 G-KWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTT 345
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y ML G L E +L + + + NI Y++ G+I+KA + ++
Sbjct: 346 YGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMR 405
Query: 377 KKGKTPTPNSWSII 390
++G +P S+ +
Sbjct: 406 QQGLSPDAVSYGAL 419
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/356 (20%), Positives = 138/356 (38%), Gaps = 15/356 (4%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ++N + EG VD+ +L +M + G + Y ++ ++ V M
Sbjct: 206 YSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMI 265
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+NGV P+ +Y I+ Y + + + +L+EM S + TY ++ NY G
Sbjct: 266 DNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEM-SAGGPKPNCCTYGSLLNYLCKNGRC 324
Query: 260 EKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
+A + + ++ K Y ++ YA+ G EM L + +
Sbjct: 325 REARFFF---DSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIF 381
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
+ K G +++A + + D ++ + G ++ A+ +++
Sbjct: 382 NIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMIN 441
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDN 437
+G TP +S + G + EK E E L V P ++IL L
Sbjct: 442 EGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVG-----IHPNIVFFNTILCNLCKE 496
Query: 438 RDVEEVEAFVSSLKIKVQKRNM--YHALTEAHIRSGQ--EVDGLLESMKADDIDED 489
V E + V S++ + ++ Y+ L + H +G E LLE M + + D
Sbjct: 497 GRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPD 552
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 67/358 (18%), Positives = 135/358 (37%), Gaps = 16/358 (4%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
+L++ G K + ++ L R + A + M G+G+ SV + + L
Sbjct: 295 MLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYA 354
Query: 116 KVRGLESAETYFNSL--NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
L N + N ++ + Y + G++D+++ + KM++ G A+
Sbjct: 355 TKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAV 414
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
+Y ++ G+ + M GV PD + + + +E + EM
Sbjct: 415 SYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEM 474
Query: 234 ESQSHISMDWGTYSTVANY-YIIAGL-KEKAIIYLKKCEDIV---SKSKDALGYNHLISH 288
++ G + + + I+ L KE ++ ++ D + D + YN LI
Sbjct: 475 -------LNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDG 527
Query: 289 YASLGNKDEMMKFW-GLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCY 347
+ G DE K G+ + K + Y T+L K G ++ A + +
Sbjct: 528 HCLAGTIDEASKLLEGMVSVGLKPD-SFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITP 586
Query: 348 DFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
N IL G Q +A + ++ G +++II G N +++A +
Sbjct: 587 GVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIK 644
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 80/195 (41%), Gaps = 3/195 (1%)
Query: 79 LRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQL-DLIGKVRGLESAETYFNSLNDEDKVD 137
++ +R A + M +GL V + L L R E+ E Y + +N +++
Sbjct: 801 IKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMN 860
Query: 138 -KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
Y +LN + VDE+ + Q + G + + +N ++ G+ E D+
Sbjct: 861 IYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFA 920
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
+ NG+ PD +YR+ + L + + ME +S +D + + +
Sbjct: 921 AIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTME-KSGTPLDSRLLNALVRRLLQR 979
Query: 257 GLKEKAIIYLKKCED 271
G +A YL K ++
Sbjct: 980 GDISRAGAYLSKLDE 994
>gi|357502615|ref|XP_003621596.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496611|gb|AES77814.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 125/270 (46%), Gaps = 5/270 (1%)
Query: 126 YFNSLNDEDKV-DKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYT 183
+F+ + E V D+L Y +LL+ +G+ + + L+ +M + G A YN +
Sbjct: 271 FFDEMLAEGIVPDRLTYNSLLSVCASKGMWETAQKLLSEMDQKGIVRDAFTYNTYLDTLC 330
Query: 184 NTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDW 243
GQ + VL +M V P +Y I+ + L N+ +EM+ +S IS+D
Sbjct: 331 KGGQIDLARRVLEEMSSRRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMKLRS-ISVDR 389
Query: 244 GTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWG 303
+Y+T+ Y G ++AI K+ E K +D + YN L+S Y G DE+ + +
Sbjct: 390 VSYNTMVGIYAKLGRFDEAIGQCKEMESCGMK-RDVVTYNALLSGYGRYGMYDEVRRLFE 448
Query: 304 LQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKG 363
K Y TM+ K G +EA + ++++ + D I+ + G
Sbjct: 449 EMKAWNIYPNTLTYSTMIDVYTKGGMFQEAMDVYKDFKKAQLEVDVVFYTSIIDSLCKNG 508
Query: 364 MIEKADAVLKEIVKKGKTPTPNSW-SIIAA 392
++E + +L +++KG P ++ SII A
Sbjct: 509 LVESSIMLLIAMIEKGIKPNVVTFNSIIDA 538
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/311 (20%), Positives = 135/311 (43%), Gaps = 17/311 (5%)
Query: 108 AVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYG--ALLNCYVREGLVDESLSLMQKMKE 165
+ + +G++ + A F S E + +Y A+++ Y R G +++ L + M+
Sbjct: 182 STMIGTLGRLGEINHALRLFESARLEGHGNTVYSFSAMISAYGRNGHFSDAVDLFRSMRS 241
Query: 166 MGSFGSALNYNGIMCLYTNTGQHEKIP-DVLL----DMKENGVPPDNFSYRICINSYGAR 220
G + + ++YN ++ + G ++ DV++ +M G+ PD +Y ++ ++
Sbjct: 242 WGVYPNLISYNSLI----DAGAKGEVDFDVVVKFFDEMLAEGIVPDRLTYNSLLSVCASK 297
Query: 221 SELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS--KD 278
+ + +L EM+ Q I D TY+T + G + A + E++ S+
Sbjct: 298 GMWETAQKLLSEMD-QKGIVRDAFTYNTYLDTLCKGGQIDLA---RRVLEEMSSRRVWPT 353
Query: 279 ALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLE 338
+ Y+ +I A ++ + + K++ Y TM+G K+G +EA +
Sbjct: 354 VVTYSTMIDGCAKANLLEDALNLYEEMKLRSISVDRVSYNTMVGIYAKLGRFDEAIGQCK 413
Query: 339 EWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKN 398
E E D N +L GY + GM ++ + +E+ P ++S + Y
Sbjct: 414 EMESCGMKRDVVTYNALLSGYGRYGMYDEVRRLFEEMKAWNIYPNTLTYSTMIDVYTKGG 473
Query: 399 NMEKAFECMKE 409
++A + K+
Sbjct: 474 MFQEAMDVYKD 484
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 84/181 (46%), Gaps = 3/181 (1%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED-KVDKL-YGALLN 145
A +V E MS + + +V ++ +D K LE A + + VD++ Y ++
Sbjct: 338 ARRVLEEMSSRRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMKLRSISVDRVSYNTMVG 397
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
Y + G DE++ ++M+ G + YN ++ Y G ++++ + +MK + P
Sbjct: 398 IYAKLGRFDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYGMYDEVRRLFEEMKAWNIYP 457
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
+ +Y I+ Y +V ++ + ++ + +D Y+++ + GL E +I+
Sbjct: 458 NTLTYSTMIDVYTKGGMFQEAMDVYKDFK-KAQLEVDVVFYTSIIDSLCKNGLVESSIML 516
Query: 266 L 266
L
Sbjct: 517 L 517
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 126/273 (46%), Gaps = 8/273 (2%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGI---MCLYTNTGQHEKIPDVLL 196
Y L+N + +EG + ++ + ++++ G + +++N + +C N + ++
Sbjct: 226 YNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKT-- 283
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
M+EN + PD F+Y + I+ L E + EM+ Q + + T++ + + +
Sbjct: 284 -MEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQ-QRGLRPNGITFTALIDGQYRS 341
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
+ A+ + + K D + YN L++ +G+ ++ K K+ K
Sbjct: 342 RRMDSAMNTYHQMLTMGVKP-DLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKIT 400
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y T++ K G+LE A ++ + D ++ G+ + G + A+ L+E+V
Sbjct: 401 YTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMV 460
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
+ G P +++++ GY K N++ F+ +KE
Sbjct: 461 EAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKE 493
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 117/307 (38%), Gaps = 42/307 (13%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESA-ETYFNSLNDE 133
+I L R A Q+ + M +GL + +D + R ++SA TY L
Sbjct: 299 LIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMG 358
Query: 134 DKVD-KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
K D +Y LLN + G V+++ L+ +MK +G + Y ++ Y G E
Sbjct: 359 VKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAM 418
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
++ M E GV DN ++ I+ + + E L+EM
Sbjct: 419 EIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREM------------------- 459
Query: 253 YIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQ 312
+ AG+K D Y +I Y GN K +I K
Sbjct: 460 -VEAGMKP-----------------DDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKP 501
Query: 313 LNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
Y ++ L K G+++ A +LE D NI+L G+ + G KA+ +L
Sbjct: 502 GVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG---KAEDLL 558
Query: 373 KEIVKKG 379
K +KG
Sbjct: 559 KLRNEKG 565
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 61/341 (17%), Positives = 134/341 (39%), Gaps = 39/341 (11%)
Query: 63 EGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLES 122
G + + + +I L + ++ + M + V ++V + + K L+
Sbjct: 252 RGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDV 311
Query: 123 AETYFNSLNDEDKVDK--LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMC 180
AE F+ + + AL++ R +D +++ +M MG + YN ++
Sbjct: 312 AEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLN 371
Query: 181 LYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHIS 240
G K ++ +MK G+ PD +Y I+ Y +L S + + M + +
Sbjct: 372 GLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEG-VV 430
Query: 241 MDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMK 300
+D ++ + + + G A L++ + K DA Y +I Y
Sbjct: 431 LDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDAT-YTMVIDGY----------- 478
Query: 301 FWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYS 360
CKK G ++ K+L+E +++ + N+++ G
Sbjct: 479 --------CKK----------------GNVKMGFKLLKEMQINGHKPGVITYNVLMNGLC 514
Query: 361 QKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNME 401
++G ++ A+ +L+ ++ G TP +++I+ G+ E
Sbjct: 515 KQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAE 555
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 105/234 (44%), Gaps = 21/234 (8%)
Query: 30 AVKP--VARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKH 87
VKP V N L + + +GD + + ++D+ + G K ++ +I +
Sbjct: 358 GVKPDLVMYNTLLNGLCKVGDVNKA-RKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLES 416
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLI------GKVRGLESA--ETYFNSLNDEDKVDKL 139
A+++ + M+ +G+ V D+ LI G+VR E E + +D
Sbjct: 417 AMEIRKGMNEEGV---VLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDAT--- 470
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +++ Y ++G V L+++M+ G + YN +M GQ + +L M
Sbjct: 471 YTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAML 530
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYY 253
GV PD+ +Y I + + + E++L+ + ++ + +D+ Y+++ + Y
Sbjct: 531 NLGVTPDDITYNILLEGHCKNGK---AEDLLK-LRNEKGLIVDYAYYTSLVSEY 580
>gi|26449475|dbj|BAC41864.1| unknown protein [Arabidopsis thaliana]
gi|29028966|gb|AAO64862.1| At5g25630 [Arabidopsis thaliana]
Length = 574
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 150/311 (48%), Gaps = 17/311 (5%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+ A++N + G +++++ + KMKE+G + YN ++ Y G+ E+ ++L M
Sbjct: 117 FFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLM 176
Query: 199 KENG---VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYII 255
E G V P+ ++ + + ++ + ++ V+++ME + + D TY+T+A Y+
Sbjct: 177 LEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKME-ECGVRPDTVTYNTIATCYVQ 235
Query: 256 AGLKEKAIIYLKKCEDIVSKSK---DALGYNHLISHYASLGNKDEMMKFWG-LQKIKCKK 311
G +A + E +V K K + ++ Y G + ++F +++++ +
Sbjct: 236 KGETVRA--ESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEA 293
Query: 312 QLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAV 371
L + +++ V++ + + +++L + D + ++ +S G +EKA V
Sbjct: 294 NL-VVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQV 352
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSIL 431
KE+VK G P +++SI+A GY +KA E + E L V RP + ++++
Sbjct: 353 FKEMVKAGVKPDAHAYSILAKGYVRAKGPKKAEELL-ETLIVES-----RPNVVIFTTVI 406
Query: 432 DWLGDNRDVEE 442
N +++
Sbjct: 407 SGWCSNGSMDD 417
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 79/162 (48%), Gaps = 3/162 (1%)
Query: 141 GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKE 200
G ++ Y REG V + L +++MKEM + + +N ++ + + I +VL MKE
Sbjct: 264 GIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKE 323
Query: 201 NGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKE 260
V D +Y +N++ + + V +EM ++ + D YS +A Y+ A +
Sbjct: 324 CNVKADVITYSTVMNAWSSAGYMEKAAQVFKEM-VKAGVKPDAHAYSILAKGYVRAKGPK 382
Query: 261 KAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFW 302
KA L+ IV + + + +IS + S G+ D+ M+ +
Sbjct: 383 KAEELLETL--IVESRPNVVIFTTVISGWCSNGSMDDAMRVF 422
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 96/223 (43%), Gaps = 7/223 (3%)
Query: 178 IMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS 237
+M + G+ + V + E G P SY + + + + S+ +++ E+E QS
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVE-QS 109
Query: 238 HISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDE 297
+D ++ V N + +G E A+ L K +++ + YN LI Y G +
Sbjct: 110 GTKLDSIFFNAVINAFSESGNMEDAVQALLKMKEL-GLNPTTSTYNTLIKGYGIAGKPER 168
Query: 298 MMKFWGLQKIKCKKQLN---RDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNI 354
+ L + + R + ++ + K ++EEA +++++ E D N
Sbjct: 169 SSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNT 228
Query: 355 ILLGYSQKGMIEKADA--VLKEIVKKGKTPTPNSWSIIAAGYA 395
I Y QKG +A++ V K ++K+ P + I+ GY
Sbjct: 229 IATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYC 271
>gi|357502623|ref|XP_003621600.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496615|gb|AES77818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 890
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 143/307 (46%), Gaps = 24/307 (7%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP-DVLL-- 196
+ A+++ + R G +++ L + M G + + YN I+ + G ++ DV++
Sbjct: 251 FSAMISAFGRNGRFPDAVDLFRSMSSWGVVPNVITYNSII----DAGAKGEVSFDVVVKF 306
Query: 197 --DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYI 254
+M NG+ PD +Y ++ ++ + +L EM+ + I D TY+T +
Sbjct: 307 YDEMIANGLMPDRLTYNSLLSVCASKGMWEMAQKLLSEMDHRC-IVPDVFTYNTYLDTLC 365
Query: 255 IAGLKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQ 312
AG + A + E++ SK + + Y+ ++ YA ++ + + K++
Sbjct: 366 KAGQIDLA---RRVFEEMSSKRVWPNVVTYSAMMDGYAKANLLEDALNLYEEMKLRSVCL 422
Query: 313 LNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
Y T++G K+G L+EA + +E E S D N +L GY + GM ++ +
Sbjct: 423 DRVSYNTLVGIYEKLGNLDEAIEKCKEMERSGINRDVVTYNALLSGYGKHGMYDEVRRLF 482
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLV--SSI 430
+E+ K + PN+ + Y+ +M E +EA+ V+ E K R + +V S+I
Sbjct: 483 EEM--KARNIYPNTLT-----YSTMIDMYTKGEMFQEAMDVYREFKMARLEIDVVFYSAI 535
Query: 431 LDWLGDN 437
+D L N
Sbjct: 536 IDTLCKN 542
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/208 (18%), Positives = 98/208 (47%), Gaps = 3/208 (1%)
Query: 58 DQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKV 117
D+ + G L ++ S+ ++ A ++ M + + V + LD + K
Sbjct: 308 DEMIANGLMPDRLTYNSLLSVCASKGMWEMAQKLLSEMDHRCIVPDVFTYNTYLDTLCKA 367
Query: 118 RGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNY 175
++ A F ++ + + Y A+++ Y + L++++L+L ++MK ++Y
Sbjct: 368 GQIDLARRVFEEMSSKRVWPNVVTYSAMMDGYAKANLLEDALNLYEEMKLRSVCLDRVSY 427
Query: 176 NGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMES 235
N ++ +Y G ++ + +M+ +G+ D +Y ++ YG + + +EM++
Sbjct: 428 NTLVGIYEKLGNLDEAIEKCKEMERSGINRDVVTYNALLSGYGKHGMYDEVRRLFEEMKA 487
Query: 236 QSHISMDWGTYSTVANYYIIAGLKEKAI 263
++ I + TYST+ + Y + ++A+
Sbjct: 488 RN-IYPNTLTYSTMIDMYTKGEMFQEAM 514
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 104/482 (21%), Positives = 187/482 (38%), Gaps = 96/482 (19%)
Query: 68 SELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLD-------------LI 114
S ++ R + K+F L + + G+A +++ + ++ ++
Sbjct: 87 SLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVL 146
Query: 115 GKVR--GLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
GKV G E T FN+L + G L EG V E++ L+ +M E G
Sbjct: 147 GKVMKLGYEPDTTTFNTL--------IKGLFL-----EGKVSEAVVLVDRMVENGCQPDV 193
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQE 232
+ YN I+ +G D+L M+E V D F+Y I+S + + ++ +E
Sbjct: 194 VTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKE 253
Query: 233 MESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYA 290
ME++ I TY+++ AG + LK D+VS+ + + +N L+ +
Sbjct: 254 METKG-IKSSVVTYNSLVRGLCKAGKWNDGALLLK---DMVSREIVPNVITFNVLLDVFV 309
Query: 291 SLGNKDEMMKFWGLQKIKCKKQLNR-------DYITMLGSLVKIGELEEAEKMLEEWE-- 341
G E + + K+ + R Y T++ L EA ML+
Sbjct: 310 KEGKLQEANELY-------KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN 362
Query: 342 ------------LSCYCYDFRVPN---------------------IILLGYSQKGMIEKA 368
+ YC RV + I++ G+ Q G I+ A
Sbjct: 363 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 422
Query: 369 DAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLV- 427
+ + +E+V G P ++ I+ G D +EKA E + E+ + + +V
Sbjct: 423 EELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALE-------IFEDLQKSKMDLGIVM 475
Query: 428 -SSILDWLGDNRDVEEVEAFVSSLKIKVQKRNM--YHALTEAHIRSG--QEVDGLLESMK 482
++I++ + VE+ SL K K N+ Y + + G E + LL M+
Sbjct: 476 YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 535
Query: 483 AD 484
D
Sbjct: 536 ED 537
>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 908
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/363 (20%), Positives = 158/363 (43%), Gaps = 6/363 (1%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
+++Q G +S + I L KR A++V + +GL + + + +
Sbjct: 247 IINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLC 306
Query: 116 KVRGLESAETYFNSLNDEDKV--DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
+++ E + + + V + L+ ++ G ++ + L+ K+ ++G +
Sbjct: 307 RIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLF 366
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
YN ++ TG+ E+ + M E G+ P++ +Y I I+ +G R++L +M
Sbjct: 367 VYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKM 426
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLG 293
+ IS +Y+++ N G + A + K+ D K A Y LIS Y G
Sbjct: 427 -IECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVA-TYTSLISGYCKDG 484
Query: 294 NKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEW-ELSCYCYDFRVP 352
+ K + K + ++ L +I ++ EA K+ +E EL +
Sbjct: 485 LVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTY- 543
Query: 353 NIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
N+++ G+ ++G +A +L E++KKG +P ++ + AG + +A E + +
Sbjct: 544 NVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHH 603
Query: 413 VHE 415
H+
Sbjct: 604 KHQ 606
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 63/361 (17%), Positives = 135/361 (37%), Gaps = 46/361 (12%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV--DKLYGALLN 145
A ++ M+G+G+A + + + ++ + A F+ + + + + Y L+
Sbjct: 489 AFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIE 548
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
+ REG + L+ +M + G Y ++ +TG+ + + + D+
Sbjct: 549 GHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRL 608
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
D Y + + + QEM + + MD +Y+ + I L + I
Sbjct: 609 DELCYTALLQGFCKEGRIKEALVARQEMVGRG-LQMDLVSYAVL----ISGALNQNDRIL 663
Query: 266 LKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGS 323
+ ++ K D + Y LI + GN + +FW + + + Y ++
Sbjct: 664 FELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNG 723
Query: 324 LVKIGELEEAEKMLEEW--------ELSCYCY--------------------------DF 349
L K G + EA+ + + ++ C+ +
Sbjct: 724 LFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSFANT 783
Query: 350 RVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA---FEC 406
NI++ GY Q G ++A +L ++ G P ++S Y + N++ A +EC
Sbjct: 784 VTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWEC 843
Query: 407 M 407
M
Sbjct: 844 M 844
>gi|30689969|ref|NP_197945.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|357528836|sp|Q8GZ63.2|PP397_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g25630
gi|332006092|gb|AED93475.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 574
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 150/311 (48%), Gaps = 17/311 (5%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+ A++N + G +++++ + KMKE+G + YN ++ Y G+ E+ ++L M
Sbjct: 117 FFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLM 176
Query: 199 KENG---VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYII 255
E G V P+ ++ + + ++ + ++ V+++ME + + D TY+T+A Y+
Sbjct: 177 LEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKME-ECGVRPDTVTYNTIATCYVQ 235
Query: 256 AGLKEKAIIYLKKCEDIVSKSK---DALGYNHLISHYASLGNKDEMMKFWG-LQKIKCKK 311
G +A + E +V K K + ++ Y G + ++F +++++ +
Sbjct: 236 KGETVRA--ESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEA 293
Query: 312 QLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAV 371
L + +++ V++ + + +++L + D + ++ +S G +EKA V
Sbjct: 294 NL-VVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQV 352
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSIL 431
KE+VK G P +++SI+A GY +KA E + E L V RP + ++++
Sbjct: 353 FKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELL-ETLIVES-----RPNVVIFTTVI 406
Query: 432 DWLGDNRDVEE 442
N +++
Sbjct: 407 SGWCSNGSMDD 417
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 79/162 (48%), Gaps = 3/162 (1%)
Query: 141 GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKE 200
G ++ Y REG V + L +++MKEM + + +N ++ + + I +VL MKE
Sbjct: 264 GIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKE 323
Query: 201 NGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKE 260
V D +Y +N++ + + V +EM ++ + D YS +A Y+ A +
Sbjct: 324 CNVKADVITYSTVMNAWSSAGYMEKAAQVFKEM-VKAGVKPDAHAYSILAKGYVRAKEPK 382
Query: 261 KAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFW 302
KA L+ IV + + + +IS + S G+ D+ M+ +
Sbjct: 383 KAEELLETL--IVESRPNVVIFTTVISGWCSNGSMDDAMRVF 422
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 96/223 (43%), Gaps = 7/223 (3%)
Query: 178 IMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS 237
+M + G+ + V + E G P SY + + + + S+ +++ E+E QS
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVE-QS 109
Query: 238 HISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDE 297
+D ++ V N + +G E A+ L K +++ + YN LI Y G +
Sbjct: 110 GTKLDSIFFNAVINAFSESGNMEDAVQALLKMKEL-GLNPTTSTYNTLIKGYGIAGKPER 168
Query: 298 MMKFWGLQKIKCKKQLN---RDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNI 354
+ L + + R + ++ + K ++EEA +++++ E D N
Sbjct: 169 SSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNT 228
Query: 355 ILLGYSQKGMIEKADA--VLKEIVKKGKTPTPNSWSIIAAGYA 395
I Y QKG +A++ V K ++K+ P + I+ GY
Sbjct: 229 IATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYC 271
>gi|356552149|ref|XP_003544432.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Glycine max]
Length = 481
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 138/331 (41%), Gaps = 49/331 (14%)
Query: 107 HAVQLDLIGKVRGLESAETYFNSLNDE---DKVDKLYGALLNCYVREGLVDESLSLMQKM 163
+A L ++GK R E A F + E VD +Y AL++ Y + GL+D++ S ++ M
Sbjct: 127 YAKLLMMLGKCRQPEEASLLFEIMLSEGLKPTVD-VYTALVSAYGQSGLLDQAFSTVEDM 185
Query: 164 K---------------------------------EMGSFG---SALNYNGIMCLYTNTGQ 187
K EM G + + YN I+ Y
Sbjct: 186 KSVVDCEPDVYTYSILIRCCAKFRRFDLIEHVLAEMSYLGIKCNCVTYNSIIDGYGKASM 245
Query: 188 HEKIPDVLLDMKENG-VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTY 246
E++ D L DM ENG PD F+ + +YG ++ ME E + I D T+
Sbjct: 246 FEQMDDALNDMIENGNSHPDVFTLNSFVGAYGNAGQIDKMEKWYDEFQLMG-IKPDITTF 304
Query: 247 STVANYYIIAGLKEKAIIYLKKCEDIVSK---SKDALGYNHLISHYASLGNKDEMMKFWG 303
+T+ Y AG+ EK +K D + K + + YN +I + G ++M + +
Sbjct: 305 NTMIKSYGKAGMYEK----MKTVMDFMEKRFFTPTIVTYNTVIEVFGKAGEIEKMDQHFL 360
Query: 304 LQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKG 363
K K + Y +++ + K+G +++ + ++ E S D N I+ Y Q G
Sbjct: 361 KMKHLGVKPNSITYCSLVSAYSKVGCIDKVDSIMRHVENSDVVLDTPFFNCIISAYGQAG 420
Query: 364 MIEKADAVLKEIVKKGKTPTPNSWSIIAAGY 394
++K + + ++ P +++ + Y
Sbjct: 421 NLKKMGELFLAMRERKCEPDNITFACMIQSY 451
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 34/174 (19%), Positives = 79/174 (45%), Gaps = 2/174 (1%)
Query: 58 DQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKV 117
D++ L G K +I+ ++ V ++M + ++ + +++ GK
Sbjct: 290 DEFQLMGIKPDITTFNTMIKSYGKAGMYEKMKTVMDFMEKRFFTPTIVTYNTVIEVFGKA 349
Query: 118 RGLESAETYFNSLNDED-KVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNY 175
+E + +F + K + + Y +L++ Y + G +D+ S+M+ ++ +
Sbjct: 350 GEIEKMDQHFLKMKHLGVKPNSITYCSLVSAYSKVGCIDKVDSIMRHVENSDVVLDTPFF 409
Query: 176 NGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENV 229
N I+ Y G +K+ ++ L M+E PDN ++ I SY + +++N+
Sbjct: 410 NCIISAYGQAGNLKKMGELFLAMRERKCEPDNITFACMIQSYNTQGMTEAVQNL 463
>gi|449487793|ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 126/284 (44%), Gaps = 10/284 (3%)
Query: 99 GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDES 156
G+ + ++ ++ GK+ LE + E + + Y L+ + + G + E+
Sbjct: 284 GIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEA 343
Query: 157 LSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINS 216
+ + ++M+ G +A Y+ ++ LY G+++ + ++ L MKE+ PD +Y I I
Sbjct: 344 MDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRV 403
Query: 217 YGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA--IIYLKKCEDIVS 274
+G + + ++ + +I + TY + GL E A I++ + IV
Sbjct: 404 FGEGGYFKEVVTLFHDLVDE-NIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVP 462
Query: 275 KSKDALGYNHLISHYASLGNKDE-MMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEA 333
SK Y+ LI Y DE ++ F + ++ K ++ Y +++ + + G +E
Sbjct: 463 SSK---AYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTID-TYNSLIHTFARGGLYKEF 518
Query: 334 EKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
E +L + + + I+ GY Q G E+A E+ K
Sbjct: 519 EAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFVEMEK 562
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 124/281 (44%), Gaps = 43/281 (15%)
Query: 137 DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
+ +Y +++ REGL+++ + +M G S +Y ++ Y GQ+E ++L
Sbjct: 148 EHIYTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLE 207
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDW-GTYSTVANYYII 255
MK V P+ +Y IN+ AR +L DW G +
Sbjct: 208 RMKRERVSPNILTYNTVINAC-ARGDL------------------DWEGLLG------LF 242
Query: 256 AGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEM-MKFWGLQKIKCKKQLN 314
A ++ + + D + YN L+S A+ G DE M F + + ++
Sbjct: 243 AEMRHEGV------------QPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEIT 290
Query: 315 RDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
Y ++ + K+G+LE+ +L+E E Y D N+++ +++ G I++A V K+
Sbjct: 291 -TYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQ 349
Query: 375 IVKKGKTPTPNSWSIIAAGYADK---NNMEKAFECMKEALA 412
+ G P +++SI+ Y +++ + F MKE+ A
Sbjct: 350 MQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSA 390
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 117/280 (41%), Gaps = 47/280 (16%)
Query: 175 YNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEME 234
Y I+ L G EK ++ +M GV FSY IN+YG + + +L+ M+
Sbjct: 151 YTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMK 210
Query: 235 SQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYAS--L 292
+ +S + TY+TV N L + ++ L D + YN L+S A+ L
Sbjct: 211 RE-RVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGL 269
Query: 293 GNKDEMMKFWGLQKIKCKKQLNRDYITML-GSLVKIGELEEAEKMLEEWELSCYCYDFRV 351
G++ EM+ + TM+ G +V E++ Y Y
Sbjct: 270 GDEAEMV-----------------FKTMIEGGIVP--------------EITTYSY---- 294
Query: 352 PNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
I+ + + G +EK +LKE+ +G P +S++++ +A ++++A + K+
Sbjct: 295 ---IVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQ 351
Query: 412 AVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK 451
A P S S +L+ G + ++V +K
Sbjct: 352 AAG-----CVPNASTYSILLNLYGKHGRYDDVRELFLQMK 386
>gi|255548041|ref|XP_002515077.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545557|gb|EEF47061.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 262
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 105/229 (45%), Gaps = 28/229 (12%)
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN------ 251
M + V PD SYRI + RS+++ +L++M ++ + D TY+T+ N
Sbjct: 20 MFKRDVLPDIESYRILMQGLCRRSQVNGAVGLLEDMLNKGFVP-DCLTYTTLLNSLCRKK 78
Query: 252 -----YYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQK 306
Y ++ +K K + D + YN +IS + G + K G
Sbjct: 79 KLREAYKLLCRMKVKGC------------NPDIVHYNTIISGFCREGRAMDARKVLG--D 124
Query: 307 IKCKKQLNR--DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGM 364
++C L Y T++ + G +EA+ LEE L + F V + ++ G+ G
Sbjct: 125 MECNGCLPNLVSYRTLVAGICDQGMFDEAKSYLEEMILKGFSPHFSVSHALVKGFCIVGK 184
Query: 365 IEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAV 413
IE+A V++ ++K G+ P ++W II + +++E + + +A+ V
Sbjct: 185 IEEACGVVEVLLKHGEVPHADTWIIILPRICEVDDLEGIRQSLDKAMMV 233
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 55/123 (44%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y LLN R+ + E+ L+ +MK G ++YN I+ + G+ VL DM+
Sbjct: 67 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTIISGFCREGRAMDARKVLGDME 126
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
NG P+ SYR + + ++ L+EM + +++ V + I+ ++
Sbjct: 127 CNGCLPNLVSYRTLVAGICDQGMFDEAKSYLEEMILKGFSPHFSVSHALVKGFCIVGKIE 186
Query: 260 EKA 262
E
Sbjct: 187 EAC 189
>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 83/390 (21%), Positives = 168/390 (43%), Gaps = 57/390 (14%)
Query: 83 KRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--Y 140
K ++ + M G+ SV + + L + KVR ++ A F+ + + V Y
Sbjct: 171 KDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTY 230
Query: 141 GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKE 200
L++ Y + G ++E+L ++MKE + + YN ++ +G+ + +VLL+M+
Sbjct: 231 NTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEG 290
Query: 201 NGVPPDNF-SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+G P F S+ +S GA + + I +D TY + N G
Sbjct: 291 SGFLPGGFLSFVFDDHSNGAGDD---------GLFDGKEIRIDERTYCILLNGLCRVGRI 341
Query: 260 EKAIIYLKK-CEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
EKA L K E+ V+ SK + YN L++ Y G+ +
Sbjct: 342 EKAEEVLAKLVENGVTPSK--ISYNILVNAYCQEGDVKK--------------------- 378
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
+++ ++E E+ LE ++ N ++ + + G ++ A+ ++ +V+K
Sbjct: 379 ----AILTTEQME--ERGLEPNRITF--------NTVISKFCETGEVDHAETWVRRMVEK 424
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNR 438
G +PT +++ + GY K + + FE + E + +P S+++ L +R
Sbjct: 425 GVSPTVETYNSLINGYGQKGHFVRCFEFLDEM-----DKAGIKPNVISYGSLINCLCKDR 479
Query: 439 DVEEVEAFVSSLKIKVQKRN--MYHALTEA 466
+ + E ++ + + N +Y+ L EA
Sbjct: 480 KLIDAEIVLADMIGRGVSPNAEIYNMLIEA 509
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 121/290 (41%), Gaps = 50/290 (17%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+N Y +EG V +++ ++M+E G + + +N ++ + TG+ + + M
Sbjct: 363 YNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMV 422
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E GV P +Y IN YG + L EM+ ++ I + +Y ++ N K
Sbjct: 423 EKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMD-KAGIKPNVISYGSLINCLC----K 477
Query: 260 EKAIIYLKKC-EDIVSK--SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
++ +I + D++ + S +A YN LI SL
Sbjct: 478 DRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSL------------------------ 513
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
+L++A + +E S N ++ G + G ++KA+ + ++
Sbjct: 514 -----------SKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMA 562
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSL 426
KG P +++ + +GYA N +K E ++++ K KP++
Sbjct: 563 GKGCNPDVITYNSLISGYAKSVNTQKCLE-------LYDKMKILGIKPTV 605
>gi|242034947|ref|XP_002464868.1| hypothetical protein SORBIDRAFT_01g027870 [Sorghum bicolor]
gi|241918722|gb|EER91866.1| hypothetical protein SORBIDRAFT_01g027870 [Sorghum bicolor]
Length = 594
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 136/321 (42%), Gaps = 20/321 (6%)
Query: 138 KLYGALLNCYV----REGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPD 193
KL A+ C + REG ++E+ +++ KM + GS S + Y ++ + G+HEK +
Sbjct: 203 KLSSAMWTCLIARLCREGRLEEACNMLAKMVDSGSSPSVVTYTPLVRGFLRAGRHEKARE 262
Query: 194 VLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYY 253
+L M PD Y + ++S + ++ + S I D T ST+A
Sbjct: 263 LLGSMMSASCSPDIVLYNVLMDSMAKERRYNEALDIYMHIHG-SQIKPDAYTLSTLARVL 321
Query: 254 IIA---GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCK 310
+ GL + I+ DI S D + N ++S G E ++F+ + C
Sbjct: 322 QFSQNMGLLHRLILR----SDI---SLDLVACNSVLSALCKSGFPSEAIQFYIDRIETCT 374
Query: 311 KQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADA 370
+ ++ +L SL ++G + A + S + V IL G ++G A
Sbjct: 375 SSDSYTHVGLLDSLCQLGRVNHAIDVYHNIIASAPESNAYVHAAILCGLVRQGQSLAALR 434
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSI 430
+L+E V+K ++++ G + +E+AF + +N P + +
Sbjct: 435 ILREAVRKKYAVNSVCYTVVLHGLFCVHLVEEAFRLFDQM-----KNSGLAPNTCTYNVM 489
Query: 431 LDWLGDNRDVEEVEAFVSSLK 451
L L RD+ V+ ++ ++
Sbjct: 490 LRGLCRTRDLHAVKQLLTEME 510
>gi|15242530|ref|NP_198814.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171449|sp|Q9FLD8.1|PP408_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39980, chloroplastic; Flags: Precursor
gi|10176990|dbj|BAB10222.1| unnamed protein product [Arabidopsis thaliana]
gi|332007115|gb|AED94498.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 678
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 132/302 (43%), Gaps = 16/302 (5%)
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YG 141
+F AL V M A + + +D+ G++ ++ A+ F SL D + Y
Sbjct: 310 KFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYN 369
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
+L Y L E++ L + M+ + + YN ++ +Y T +HEK +++ +M+
Sbjct: 370 TILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSR 429
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
G+ P+ +Y I+ +G +L + Q++ S S + +D Y T+ Y GL
Sbjct: 430 GIEPNAITYSTIISIWGKAGKLDRAATLFQKLRS-SGVEIDQVLYQTMIVAYERVGLMGH 488
Query: 262 AIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITML 321
A L + K D + I+ A G +E W ++ ++ I++
Sbjct: 489 AKRLLHEL-----KLPDNIPRETAITILAKAGRTEEAT--WVFRQAFESGEVKD--ISVF 539
Query: 322 GSLVKIGELEE----AEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
G ++ + + ++ E+ + Y D V ++L Y ++ EKAD V +E+ +
Sbjct: 540 GCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQE 599
Query: 378 KG 379
+G
Sbjct: 600 EG 601
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 70/350 (20%), Positives = 156/350 (44%), Gaps = 13/350 (3%)
Query: 61 VLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQG-LAFSVHDHAVQLDLIGKVRG 119
+L K +L ++ ++ L ++ +L + +W+ + SV + V L + + +
Sbjct: 111 LLSTYKDRQLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQ 170
Query: 120 LESAETYFNSLNDEDKVDK--LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNG 177
+ A F+ + Y L+ + +EG+ D +LS +QKM++ G + Y+
Sbjct: 171 FDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSN 230
Query: 178 IMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS 237
++ L + K + +K +G+ PD +Y IN YG +++EM +++
Sbjct: 231 LIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEM-NEA 289
Query: 238 HISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDE 297
+ + +YST+ + Y+ +A+ + ++ V+ + D N +I Y L E
Sbjct: 290 GVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKE-VNCALDLTTCNIMIDVYGQLDMVKE 348
Query: 298 MMK-FWGLQKIKCKKQLNRDYITML---GSLVKIGELEEAEKMLEEWELSCYCYDFRVPN 353
+ FW L+K+ + + Y T+L G GE ++++ ++ + N
Sbjct: 349 ADRLFWSLRKMDIEPNVV-SYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY---N 404
Query: 354 IILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
++ Y + EKA +++E+ +G P ++S I + + +++A
Sbjct: 405 TMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRA 454
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/383 (19%), Positives = 166/383 (43%), Gaps = 21/383 (5%)
Query: 68 SELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYF 127
SE + ++ LR R + + AL + + ++ G++ ++ + +D + K R + AE F
Sbjct: 331 SEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLF 390
Query: 128 NSLNDEDKV--DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNT 185
+ + D Y L++ + R G +D +LS + +M +MG S YN ++ +
Sbjct: 391 DRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKF 450
Query: 186 GQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGT 245
G ++ +M + P +Y + Y ++ +++ + EM + + + T
Sbjct: 451 GDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIY-T 509
Query: 246 YSTVANYYIIAGLKEKAI-IYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGL 304
++T+ + AGL A+ ++ + E V ++ + YN +I Y GN + +F
Sbjct: 510 FTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNR--VTYNVMIEGYCEEGNMSKAFEFLNE 567
Query: 305 QKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLE-----EWELSCYCYDFRVPNIILLGY 359
K Y ++ L G+ EA+ ++ EL+ CY +L G+
Sbjct: 568 MIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICY-----TGLLHGF 622
Query: 360 SQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKF 419
++G +E+A +V +++ +G + ++ G + + +KE ++
Sbjct: 623 CREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEM-----HDRG 677
Query: 420 WRPKPSLVSSILDWLGDNRDVEE 442
+P + +S++D D +E
Sbjct: 678 LKPDDVIYTSMIDAKSKTGDFKE 700
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 124/284 (43%), Gaps = 37/284 (13%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ LL+ R GL+ +++ L +M E + + YN ++ Y G K + L +M
Sbjct: 510 FTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMI 569
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E G+ PD +SYR I+ + +S V + + + ++ Y+ + + + G
Sbjct: 570 EKGIVPDTYSYRPLIHGLCLTGQ-ASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKL 628
Query: 260 EKAIIYLKKCEDIVSKSK--DALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD- 316
E+A L C+D+ + D + Y LI SL +KD + F GL K + L D
Sbjct: 629 EEA---LSVCQDMGLRGVDLDLVCYGVLID--GSLKHKDRKV-FLGLLKEMHDRGLKPDD 682
Query: 317 --YITMLGSLVKIGELEEAEKMLEEWEL----SCYCYDFRVPN-----IILLGYSQKGMI 365
Y +M+ + K G+ +EA + W+L C VPN ++ G + G +
Sbjct: 683 VIYTSMIDAKSKTGDFKEAFGI---WDLMINEGC------VPNEVTYTAVINGLCKAGFV 733
Query: 366 EKADAVLKEIVKKGKTPTPNSWS----IIAAGYADKNNMEKAFE 405
+A+ + ++ P ++ I+ G D M+KA E
Sbjct: 734 NEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGD---MKKAVE 774
>gi|242073234|ref|XP_002446553.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
gi|241937736|gb|EES10881.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
Length = 381
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 114/274 (41%), Gaps = 45/274 (16%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +++ REG VD++ L+ + G + +NYN ++ + + ++L +M
Sbjct: 19 YNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGLCSIERWVDAEELLDEMV 78
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
PP+ + + +N+ + GL
Sbjct: 79 RENCPPNEATVNVIVNTLSRK------------------------------------GLL 102
Query: 260 EKAIIYLKKCEDIVSK---SKDALGYNHLISHYASLGNKDEMMKFWG-LQKIKCKKQLNR 315
+K YL+K +SK + + + YN +IS G+ D ++ +Q CK +
Sbjct: 103 QKVTRYLEK----MSKHGCTANVVTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDI-V 157
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
Y T+L L + E+AE+++ + + D N I+ QKG+I +A V K++
Sbjct: 158 TYNTLLKGLCSADQWEDAEELMIKMSQNDCLPDNVTFNTIISFLCQKGLILQAFEVFKQM 217
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
+KG P ++S I G A ME+A E + E
Sbjct: 218 PEKGCNPNSTTYSTIIGGLAKAGKMEQALELLNE 251
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 119/266 (44%), Gaps = 7/266 (2%)
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
++N R+GL+ + ++KM + G + + YN ++ G + ++L +M+
Sbjct: 91 VIVNTLSRKGLLQKVTRYLEKMSKHGCTANVVTYNAVISGMCEQGHVDSALELLSNMQSF 150
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
G PD +Y + + + E ++ +M SQ+ D T++T+ ++ GL +
Sbjct: 151 GCKPDIVTYNTLLKGLCSADQWEDAEELMIKM-SQNDCLPDNVTFNTIISFLCQKGLILQ 209
Query: 262 AIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD--YIT 319
A K+ + + ++ Y+ +I A G ++ ++ K N D Y
Sbjct: 210 AFEVFKQMPE-KGCNPNSTTYSTIIGGLAKAGKMEQALELLNEMA---SKGYNTDKMYQL 265
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
+ SL K ++EE +++ + + S + N +LL + G + A VL ++V G
Sbjct: 266 LTESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNTVLLVLCRNGKTDYAIDVLADMVSYG 325
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFE 405
P ++ I+ G + + +++A E
Sbjct: 326 CMPDELTYIILIEGLSYEGYLQEARE 351
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 62/141 (43%), Gaps = 1/141 (0%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I L + A +V + M +G + ++ + + K +E A N + +
Sbjct: 197 IISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQALELLNEMASKG 256
Query: 135 -KVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPD 193
DK+Y L +E ++E + ++ K+++ G + +N ++ + G+ + D
Sbjct: 257 YNTDKMYQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNTVLLVLCRNGKTDYAID 316
Query: 194 VLLDMKENGVPPDNFSYRICI 214
VL DM G PD +Y I I
Sbjct: 317 VLADMVSYGCMPDELTYIILI 337
>gi|145335386|ref|NP_172560.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242678|sp|Q0WVV0.1|PPR31_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g10910, chloroplastic; Flags: Precursor
gi|110741600|dbj|BAE98748.1| membrane-associated salt-inducible protein isolog [Arabidopsis
thaliana]
gi|332190541|gb|AEE28662.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 664
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 86/433 (19%), Positives = 180/433 (41%), Gaps = 49/433 (11%)
Query: 71 ELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSL 130
+L ++R R++ +Q+ EWM G SV ++ + +G + + A + S+
Sbjct: 100 DLNVILRDFGISGRWQDLIQLFEWMQQHG-KISVSTYSSCIKFVG-AKNVSKALEIYQSI 157
Query: 131 NDEDKVDKLY--GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNG----------- 177
DE +Y ++L+C V+ G +D + L +MK G + YN
Sbjct: 158 PDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNG 217
Query: 178 -------------------------IMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
++ + + G+ E+ + + MK G P+ + Y
Sbjct: 218 YPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSS 277
Query: 213 CINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDI 272
+NSY + + + ++ EM+S + + +T+ YI GL +++ L + E
Sbjct: 278 LLNSYSWKGDYKKADELMTEMKSIGLVP-NKVMMTTLLKVYIKGGLFDRSRELLSELES- 335
Query: 273 VSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEE 332
+++ + Y L+ + G +E + K K + M+ +L + +E
Sbjct: 336 AGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKE 395
Query: 333 AEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAA 392
A+++ + E + D + N +L Y + G +E ++K++ ++ +P N++ I+
Sbjct: 396 AKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIK 455
Query: 393 GYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKI 452
+ + A++ L +H +K R + L SS++ LG R + EAF +
Sbjct: 456 YFIKEKLHLLAYQ---TTLDMH--SKGHRLEEELCSSLIYHLGKIR--AQAEAFSVYNML 508
Query: 453 KVQKRNMYHALTE 465
+ KR + L E
Sbjct: 509 RYSKRTICKELHE 521
>gi|58013026|gb|AAW62966.1| chloroplast embryo-defective 1270 [Arabidopsis thaliana]
Length = 1429
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 152/338 (44%), Gaps = 24/338 (7%)
Query: 85 FKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGL------ESAETYFNSLNDEDKVDK 138
++ AL+V EW++ + H H+ ++ + G+ ES + + D+
Sbjct: 171 WQRALEVFEWLNLR------HWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDR 224
Query: 139 L--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM-CLYTNTGQHEKIPDVL 195
+ Y A++ Y R G ++ L+ M++ G +++N ++ + G + L
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVEL 284
Query: 196 LDMKEN-GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYI 254
LDM N G+ PD +Y +++ S L V ++ME+ D TY+ + + Y
Sbjct: 285 LDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAH-RCQPDLWTYNAMISVYG 343
Query: 255 IAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFW-GLQKIKCKKQL 313
GL +A + E + DA+ YN L+ +A N +++ + + +QK+ K
Sbjct: 344 RCGLAAEAERLFMELE-LKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKD- 401
Query: 314 NRDYITMLGSLVKIGELEEAEKMLEEWE-LSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
Y T++ K G+L+ A ++ ++ + LS D +++ + +A A++
Sbjct: 402 EMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALM 461
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKA---FECM 407
E++ G PT ++S + GYA E+A F CM
Sbjct: 462 SEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCM 499
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 1/194 (0%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y A+++ Y R GL E+ L +++ G F A+ YN ++ + EK+ +V M+
Sbjct: 335 YNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQ 394
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ G D +Y I+ YG + +L + ++M+ S + D TY+ + + A
Sbjct: 395 KMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRT 454
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
+A + + D+ K Y+ LI YA G ++E + K N Y
Sbjct: 455 VEAAALMSEMLDVGIKPT-LQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSV 513
Query: 320 MLGSLVKIGELEEA 333
ML L++ E +A
Sbjct: 514 MLDVLLRGNETRKA 527
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 124/301 (41%), Gaps = 43/301 (14%)
Query: 175 YNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEME 234
YN +M +Y+ +G+ K +++ M++ G PD S+ IN+ L+ N+ E+
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTP--NLAVEL- 284
Query: 235 SQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGN 294
V N +GL+ DA+ YN L+S + N
Sbjct: 285 -----------LDMVRN----SGLR-----------------PDAITYNTLLSACSRDSN 312
Query: 295 KDEMMK-FWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPN 353
D +K F ++ +C+ L Y M+ + G EAE++ E EL + D N
Sbjct: 313 LDGAVKVFEDMEAHRCQPDL-WTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYN 371
Query: 354 IILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAV 413
+L ++++ EK V +++ K G +++ I Y + ++ A + K+ +
Sbjct: 372 SLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGL 431
Query: 414 HEENKFWRPKPSLVSSILDWLGD-NRDVEEVEAFVSSLKIKVQKR-NMYHALTEAHIRSG 471
N P + ++D LG NR VE L + ++ Y AL + ++G
Sbjct: 432 SGRN----PDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAG 487
Query: 472 Q 472
+
Sbjct: 488 K 488
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 116/273 (42%), Gaps = 15/273 (5%)
Query: 140 YGALLNCYVREGLVDESLS--LMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
+ L+N ++ G + +L+ L+ ++ G A+ YN ++ + + V D
Sbjct: 263 FNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFED 322
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
M+ + PD ++Y I+ YG + E + E+E + D TY N + A
Sbjct: 323 MEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFP-DAVTY----NSLLYAF 377
Query: 258 LKEKAIIYLKKCEDIVSK---SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN 314
+E+ +K+ + K KD + YN +I Y G D ++ + + +K N
Sbjct: 378 ARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLY--KDMKGLSGRN 435
Query: 315 RDYIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAV 371
D IT ++ SL K EA ++ E + + ++ GY++ G E+A+
Sbjct: 436 PDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDT 495
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
+++ G P ++S++ N KA+
Sbjct: 496 FSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAW 528
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 119/282 (42%), Gaps = 22/282 (7%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y LL+ R+ +D ++ + + M+ YN ++ +Y G + + ++++
Sbjct: 300 YNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELE 359
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G PD +Y + ++ ++ V Q+M+ D TY+T+ + Y G
Sbjct: 360 LKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMG-FGKDEMTYNTIIHMYGKQGQL 418
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQK----IKCKKQLNR 315
+ A+ K + + ++ DA+ Y LI SLG + ++ L + K L +
Sbjct: 419 DLALQLYKDMKGLSGRNPDAITYTVLID---SLGKANRTVEAAALMSEMLDVGIKPTL-Q 474
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPN----IILLGYSQKG-MIEKADA 370
Y ++ K G+ EEAE SC P+ ++L +G KA
Sbjct: 475 TYSALICGYAKAGKREEAEDT-----FSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWG 529
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKN---NMEKAFECMKE 409
+ ++++ G TP+ + ++ G +N +++K M+E
Sbjct: 530 LYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEE 571
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 98/209 (46%), Gaps = 6/209 (2%)
Query: 95 MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED-KVD-KLYGALLNCYVREGL 152
M G ++ + + ++L+ K + + AE + + + + KV+ ++ ++L Y
Sbjct: 883 MKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIED 942
Query: 153 VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
+++ + Q++KE G YN ++ +Y + E+ ++ M+ G+ P +Y+
Sbjct: 943 YKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKS 1002
Query: 213 CINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDI 272
I+++G + L E + +E+ S+ + +D Y T+ +G KA L+ ++
Sbjct: 1003 LISAFGKQKCLEQAEQLFEELLSKG-LKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKN- 1060
Query: 273 VSKSKDALGYNHLI-SHYASLGNKDEMMK 300
+ + L HL+ Y+S GN E K
Sbjct: 1061 -AGIEPTLATMHLLMVSYSSSGNPQEAEK 1088
>gi|449469490|ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 126/284 (44%), Gaps = 10/284 (3%)
Query: 99 GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDES 156
G+ + ++ ++ GK+ LE + E + + Y L+ + + G + E+
Sbjct: 284 GIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEA 343
Query: 157 LSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINS 216
+ + ++M+ G +A Y+ ++ LY G+++ + ++ L MKE+ PD +Y I I
Sbjct: 344 MDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRV 403
Query: 217 YGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA--IIYLKKCEDIVS 274
+G + + ++ + +I + TY + GL E A I++ + IV
Sbjct: 404 FGEGGYFKEVVTLFHDLVDE-NIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVP 462
Query: 275 KSKDALGYNHLISHYASLGNKDE-MMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEA 333
SK Y+ LI Y DE ++ F + ++ K ++ Y +++ + + G +E
Sbjct: 463 SSK---AYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTID-TYNSLIHTFARGGLYKEF 518
Query: 334 EKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
E +L + + + I+ GY Q G E+A E+ K
Sbjct: 519 EAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFVEMEK 562
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 124/281 (44%), Gaps = 43/281 (15%)
Query: 137 DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
+ +Y +++ REGL+++ + +M G S +Y ++ Y GQ+E ++L
Sbjct: 148 EHIYTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLE 207
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDW-GTYSTVANYYII 255
MK V P+ +Y IN+ AR +L DW G +
Sbjct: 208 RMKRERVSPNILTYNTVINAC-ARGDL------------------DWEGLLG------LF 242
Query: 256 AGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEM-MKFWGLQKIKCKKQLN 314
A ++ + + D + YN L+S A+ G DE M F + + ++
Sbjct: 243 AEMRHEGV------------QPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEIT 290
Query: 315 RDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
Y ++ + K+G+LE+ +L+E E Y D N+++ +++ G I++A V K+
Sbjct: 291 -TYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQ 349
Query: 375 IVKKGKTPTPNSWSIIAAGYADK---NNMEKAFECMKEALA 412
+ G P +++SI+ Y +++ + F MKE+ A
Sbjct: 350 MQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSA 390
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 117/280 (41%), Gaps = 47/280 (16%)
Query: 175 YNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEME 234
Y I+ L G EK ++ +M GV FSY IN+YG + + +L+ M+
Sbjct: 151 YTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMK 210
Query: 235 SQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYAS--L 292
+ +S + TY+TV N L + ++ L D + YN L+S A+ L
Sbjct: 211 RE-RVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGL 269
Query: 293 GNKDEMMKFWGLQKIKCKKQLNRDYITML-GSLVKIGELEEAEKMLEEWELSCYCYDFRV 351
G++ EM+ + TM+ G +V E++ Y Y
Sbjct: 270 GDEAEMV-----------------FKTMIEGGIVP--------------EITTYSY---- 294
Query: 352 PNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
I+ + + G +EK +LKE+ +G P +S++++ +A ++++A + K+
Sbjct: 295 ---IVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQ 351
Query: 412 AVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK 451
A P S S +L+ G + ++V +K
Sbjct: 352 AAG-----CVPNASTYSILLNLYGKHGRYDDVRELFLQMK 386
>gi|334185431|ref|NP_188439.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|322510063|sp|Q5G1S8.2|PP241_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g18110, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 1270; Flags: Precursor
gi|9294066|dbj|BAB02023.1| unnamed protein product [Arabidopsis thaliana]
gi|332642528|gb|AEE76049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1440
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 152/338 (44%), Gaps = 24/338 (7%)
Query: 85 FKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGL------ESAETYFNSLNDEDKVDK 138
++ AL+V EW++ + H H+ ++ + G+ ES + + D+
Sbjct: 171 WQRALEVFEWLNLR------HWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDR 224
Query: 139 L--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM-CLYTNTGQHEKIPDVL 195
+ Y A++ Y R G ++ L+ M++ G +++N ++ + G + L
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVEL 284
Query: 196 LDMKEN-GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYI 254
LDM N G+ PD +Y +++ S L V ++ME+ D TY+ + + Y
Sbjct: 285 LDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAH-RCQPDLWTYNAMISVYG 343
Query: 255 IAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFW-GLQKIKCKKQL 313
GL +A + E + DA+ YN L+ +A N +++ + + +QK+ K
Sbjct: 344 RCGLAAEAERLFMELE-LKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKD- 401
Query: 314 NRDYITMLGSLVKIGELEEAEKMLEEWE-LSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
Y T++ K G+L+ A ++ ++ + LS D +++ + +A A++
Sbjct: 402 EMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALM 461
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKA---FECM 407
E++ G PT ++S + GYA E+A F CM
Sbjct: 462 SEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCM 499
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 1/194 (0%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y A+++ Y R GL E+ L +++ G F A+ YN ++ + EK+ +V M+
Sbjct: 335 YNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQ 394
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ G D +Y I+ YG + +L + ++M+ S + D TY+ + + A
Sbjct: 395 KMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRT 454
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
+A + + D+ K Y+ LI YA G ++E + K N Y
Sbjct: 455 VEAAALMSEMLDVGIKPT-LQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSV 513
Query: 320 MLGSLVKIGELEEA 333
ML L++ E +A
Sbjct: 514 MLDVLLRGNETRKA 527
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 124/301 (41%), Gaps = 43/301 (14%)
Query: 175 YNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEME 234
YN +M +Y+ +G+ K +++ M++ G PD S+ IN+ L+ N+ E+
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTP--NLAVEL- 284
Query: 235 SQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGN 294
V N +GL+ DA+ YN L+S + N
Sbjct: 285 -----------LDMVRN----SGLR-----------------PDAITYNTLLSACSRDSN 312
Query: 295 KDEMMK-FWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPN 353
D +K F ++ +C+ L Y M+ + G EAE++ E EL + D N
Sbjct: 313 LDGAVKVFEDMEAHRCQPDL-WTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYN 371
Query: 354 IILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAV 413
+L ++++ EK V +++ K G +++ I Y + ++ A + K+ +
Sbjct: 372 SLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGL 431
Query: 414 HEENKFWRPKPSLVSSILDWLGD-NRDVEEVEAFVSSLKIKVQKR-NMYHALTEAHIRSG 471
N P + ++D LG NR VE L + ++ Y AL + ++G
Sbjct: 432 SGRN----PDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAG 487
Query: 472 Q 472
+
Sbjct: 488 K 488
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 116/273 (42%), Gaps = 15/273 (5%)
Query: 140 YGALLNCYVREGLVDESLS--LMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
+ L+N ++ G + +L+ L+ ++ G A+ YN ++ + + V D
Sbjct: 263 FNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFED 322
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
M+ + PD ++Y I+ YG + E + E+E + D TY N + A
Sbjct: 323 MEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFP-DAVTY----NSLLYAF 377
Query: 258 LKEKAIIYLKKCEDIVSK---SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN 314
+E+ +K+ + K KD + YN +I Y G D ++ + + +K N
Sbjct: 378 ARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLY--KDMKGLSGRN 435
Query: 315 RDYIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAV 371
D IT ++ SL K EA ++ E + + ++ GY++ G E+A+
Sbjct: 436 PDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDT 495
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
+++ G P ++S++ N KA+
Sbjct: 496 FSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAW 528
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 119/282 (42%), Gaps = 22/282 (7%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y LL+ R+ +D ++ + + M+ YN ++ +Y G + + ++++
Sbjct: 300 YNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELE 359
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G PD +Y + ++ ++ V Q+M+ D TY+T+ + Y G
Sbjct: 360 LKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMG-FGKDEMTYNTIIHMYGKQGQL 418
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQK----IKCKKQLNR 315
+ A+ K + + ++ DA+ Y LI SLG + ++ L + K L +
Sbjct: 419 DLALQLYKDMKGLSGRNPDAITYTVLID---SLGKANRTVEAAALMSEMLDVGIKPTL-Q 474
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPN----IILLGYSQKG-MIEKADA 370
Y ++ K G+ EEAE SC P+ ++L +G KA
Sbjct: 475 TYSALICGYAKAGKREEAEDT-----FSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWG 529
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKN---NMEKAFECMKE 409
+ ++++ G TP+ + ++ G +N +++K M+E
Sbjct: 530 LYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEE 571
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 98/209 (46%), Gaps = 6/209 (2%)
Query: 95 MSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED-KVD-KLYGALLNCYVREGL 152
M G ++ + + ++L+ K + + AE + + + + KV+ ++ ++L Y
Sbjct: 883 MKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIED 942
Query: 153 VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
+++ + Q++KE G YN ++ +Y + E+ ++ M+ G+ P +Y+
Sbjct: 943 YKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKS 1002
Query: 213 CINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDI 272
I+++G + L E + +E+ S+ + +D Y T+ +G KA L+ ++
Sbjct: 1003 LISAFGKQKCLEQAEQLFEELLSKG-LKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKN- 1060
Query: 273 VSKSKDALGYNHLI-SHYASLGNKDEMMK 300
+ + L HL+ Y+S GN E K
Sbjct: 1061 -AGIEPTLATMHLLMVSYSSSGNPQEAEK 1088
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 144/337 (42%), Gaps = 16/337 (4%)
Query: 87 HALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV--DKLYGALL 144
HAL+V + M +G V + ++ + K L+ A+ N + D + + L+
Sbjct: 318 HALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLI 377
Query: 145 NCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVP 204
+ ++E+L L +++ G +N ++ G + +MK +G
Sbjct: 378 VALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCA 437
Query: 205 PDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAII 264
PD +Y I I+ + +L + ++L+EMES + STV II L ++ +
Sbjct: 438 PDEVTYNILIDHLCSMGKLVNALDLLKEMES------NGCPRSTVTYNTIIDALCKQ--M 489
Query: 265 YLKKCEDIVSK------SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
+++ E++ + S+ A+ +N LI D+ + + + N Y
Sbjct: 490 RIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYN 549
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
++L K G+L++A +LE + + D ++ G + G + A +L+ + K
Sbjct: 550 SILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIK 609
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHE 415
G PTP +++ + +NN+ A +E V E
Sbjct: 610 GIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGE 646
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 129/307 (42%), Gaps = 41/307 (13%)
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
L+N Y + G V+++L +QK G + YN + G V+ M + G
Sbjct: 271 LINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEG 330
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYST-------------- 248
PD F+Y IN EL + ++ +M + + D T++T
Sbjct: 331 HDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLP-DTTTFNTLIVALCSQNRLEEA 389
Query: 249 --VANYYIIAGLKEKAIIY----------------LKKCEDIVSK--SKDALGYNHLISH 288
+A + GL + ++ E++ S + D + YN LI H
Sbjct: 390 LDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDH 449
Query: 289 YASLG---NKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCY 345
S+G N +++K ++ C + Y T++ +L K +EEAE++ ++ +
Sbjct: 450 LCSMGKLVNALDLLK--EMESNGCPRS-TVTYNTIIDALCKQMRIEEAEEVFDQMDAHGI 506
Query: 346 CYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
N ++ G + I+ A +++++VK+G P+ +++ I Y + +++KA +
Sbjct: 507 SRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAAD 566
Query: 406 CMKEALA 412
++ A
Sbjct: 567 ILETMTA 573
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/267 (19%), Positives = 123/267 (46%), Gaps = 9/267 (3%)
Query: 147 YVREGLVDESLSLMQKMKEMGSFGSALN---YNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
Y R D+++ L++ ++ +FG + YN ++ + + + + V +M + G+
Sbjct: 134 YARLRRFDDAVDLVRN--QLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGI 191
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAI 263
PD + I + ++ + +L+EM S + ++ D T++T+ +I G E A+
Sbjct: 192 QPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHA-VAPDETTFTTLMQGFIEEGSIEAAL 250
Query: 264 -IYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLG 322
+ K E S ++ + N LI+ Y +G ++ + + + + Y T +
Sbjct: 251 RVKTKMMETGCSPTR--VTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVH 308
Query: 323 SLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTP 382
L + G + A K+++ + D N ++ S+ G +++A ++ ++V +G P
Sbjct: 309 CLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLP 368
Query: 383 TPNSWSIIAAGYADKNNMEKAFECMKE 409
+++ + +N +E+A + +E
Sbjct: 369 DTTTFNTLIVALCSQNRLEEALDLARE 395
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 3/181 (1%)
Query: 37 NNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMS 96
N L + + +GDP + + + ++ G E+ +I L S + +AL + + M
Sbjct: 409 NILINALCKVGDPHLGIR-LFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEME 467
Query: 97 GQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE--DKVDKLYGALLNCYVREGLVD 154
G S + +D + K +E AE F+ ++ + + L++ + +D
Sbjct: 468 SNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRID 527
Query: 155 ESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICI 214
++ L+++M + G S + YN I+ Y G +K D+L M NG D +Y I
Sbjct: 528 DATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLI 587
Query: 215 N 215
N
Sbjct: 588 N 588
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 97/231 (41%), Gaps = 16/231 (6%)
Query: 192 PDVLLDMKENGVPPDNFS-----YRICINSYGARSELSSMENVLQEMESQSHISMDWGTY 246
P+ L M + + ++F+ Y I G ME +++EM + H +
Sbjct: 69 PEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVR 128
Query: 247 STVANYYIIAGLK--EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGL 304
S V +Y A L+ + A+ ++ + D YNHL++ L M +
Sbjct: 129 SFVESY---ARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLN---VLAEGSRMKLLESV 182
Query: 305 QKIKCKKQLNRDYITM---LGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQ 361
+ + D +T+ + +L + ++ A MLEE D ++ G+ +
Sbjct: 183 YNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIE 242
Query: 362 KGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
+G IE A V ++++ G +PT + +++ GY +E A +++ +A
Sbjct: 243 EGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIA 293
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 64/349 (18%), Positives = 125/349 (35%), Gaps = 50/349 (14%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ L+ ++ EG ++ +L + KM E G + + N ++ Y G+ E +
Sbjct: 233 FTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEI 292
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+G PD +Y ++ +S V+ M + H D TY+TV N
Sbjct: 293 ADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGH-DPDVFTYNTVIN-------- 343
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
+SK+ + +++ G + F T
Sbjct: 344 ------------CLSKNGELDEAKGIVNQMVDRGCLPDTTTFN----------------T 375
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
++ +L LEEA + E + D NI++ + G + +E+ G
Sbjct: 376 LIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSG 435
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRD 439
P +++I+ + A + +KE E N R + ++I+D L
Sbjct: 436 CAPDEVTYNILIDHLCSMGKLVNALDLLKEM----ESNGCPRSTVTY-NTIIDALCKQMR 490
Query: 440 VEEVEAFVSSLKIKVQKRNMYHALTEAHIRSGQEVDGLLESMKADDIDE 488
+EE E + H ++ + + +DGL ++ + DD E
Sbjct: 491 IEEAEEVFDQMDA--------HGISRSAVTFNTLIDGLCKAKRIDDATE 531
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 68/162 (41%), Gaps = 3/162 (1%)
Query: 54 TPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDL 113
T +++Q V EG + S + ++ + K A + E M+ G V + ++
Sbjct: 530 TELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLING 589
Query: 114 IGKVRGLESAETYFNSLNDED--KVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGS 171
+ K + A + + K Y ++ R + ++LSL ++M E+G
Sbjct: 590 LCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPD 649
Query: 172 ALNYNGIM-CLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
AL Y + L G ++ D L++M G P+ S+R+
Sbjct: 650 ALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRM 691
>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
Length = 543
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 116/261 (44%), Gaps = 37/261 (14%)
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
+++ + + G VD++ +L+ +M G +AL YN ++ Y ++ ++L M+ G
Sbjct: 138 VVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMENGG 197
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
+ +Y I ++S ++S +E V+ EM+++ +++ D Y+ V N Y AG +A
Sbjct: 198 IEATVGTYTILVDSLSTAGDISKVEAVVDEMKAK-NVAGDVYLYTAVINAYCRAGNVRRA 256
Query: 263 IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLG 322
+C +GN E + R Y ++
Sbjct: 257 SEVFDEC----------------------VGNGIEPNE--------------RTYGVLIN 280
Query: 323 SLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTP 382
KIG++E AE +L + + ++ + N ++ GY ++GM++ A V + K G
Sbjct: 281 GFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIEL 340
Query: 383 TPNSWSIIAAGYADKNNMEKA 403
+++ +A G N M +A
Sbjct: 341 DVYTYNTLACGLCRVNRMAEA 361
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 135/310 (43%), Gaps = 15/310 (4%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L++ G + + +++ +MK G Y ++ Y G + +V +
Sbjct: 205 YTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVFDECV 264
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
NG+ P+ +Y + IN + ++ + E +L +M+ + + + ++T+ + Y G+
Sbjct: 265 GNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRG-VGHNQIIFNTMIDGYCRQGMV 323
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI- 318
+ A + +K + + D YN L L + M + L I +K + +Y+
Sbjct: 324 DNA-LKVKAAMEKMGIELDVYTYNTLA---CGLCRVNRMAEAKTLLHIMIEKGVPPNYVT 379
Query: 319 --TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
T++ K G++ EA ++ E N+++ GY +KG I +A+ KE+
Sbjct: 380 YTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEME 439
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGD 436
KKG P +++ + G+ ++ AL + EE K +P++V+ G
Sbjct: 440 KKGLVPDVYTYASLVHGHCVNGKVDV-------ALKLFEEMKHRGTEPNVVAYTALISGL 492
Query: 437 NRDVEEVEAF 446
++ EAF
Sbjct: 493 AKEGRSEEAF 502
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 109/257 (42%), Gaps = 4/257 (1%)
Query: 86 KHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDK--LYGAL 143
+ A +V + G G+ + + V ++ K+ +E+AE + ++ +
Sbjct: 254 RRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTM 313
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
++ Y R+G+VD +L + M++MG YN + C + + +L M E GV
Sbjct: 314 IDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGV 373
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAI 263
PP+ +Y I+ + ++ + +EM + + TY+ + + YI G +A
Sbjct: 374 PPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMP-SVVTYNVMMDGYIKKGSIREAE 432
Query: 264 IYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGS 323
+ K+ E D Y L+ + G D +K + K + + Y ++
Sbjct: 433 RFRKEMEK-KGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISG 491
Query: 324 LVKIGELEEAEKMLEEW 340
L K G EEA ++ ++
Sbjct: 492 LAKEGRSEEAFQLYDDM 508
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/333 (20%), Positives = 145/333 (43%), Gaps = 16/333 (4%)
Query: 66 KISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAET 125
+++ + L VIR + + A ++ E M +G VH + + + + K+ SA
Sbjct: 313 EVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVR 372
Query: 126 YFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYT 183
+ + ++ + Y LL+ + R G+ D++ +++ +M G ++ YNGI+
Sbjct: 373 MLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALG 432
Query: 184 NTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDW 243
G+ ++ ++ +MK G PD +Y I ++ E++ + + ++ +
Sbjct: 433 KDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVA-NG 491
Query: 244 GTYSTVANYYIIAGLKEKAI-----IYLKKCE-DIVSKSKDALGYNHLISHYASLGNKDE 297
TY+T+ + + +G ++ + + L C D+VS YN LI GN D
Sbjct: 492 ITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVS-------YNGLIKALCKEGNVDR 544
Query: 298 MMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL 357
M K K N Y ++ L K G++ +A ++ +E D N ++
Sbjct: 545 SMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLIN 604
Query: 358 GYSQKGMIEKADAVLKEIVKKGKTPTPNSWSII 390
G + G A +L+++ + P +++I+
Sbjct: 605 GLCKVGWTHAALNLLEKLPNENVHPDIVTYNIL 637
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 103/234 (44%), Gaps = 4/234 (1%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
+LDQ +G ++ +I L + A+++ + M QG + + + +
Sbjct: 408 MLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLC 467
Query: 116 KVRGLESAETYFNSLNDEDKVDK--LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
++ AE F +L +E V Y L++ + G E L L +M G +
Sbjct: 468 NNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVV 527
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
+YNG++ G ++ +L +M G+ P+NFSY + IN ++ + +EM
Sbjct: 528 SYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEM 587
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLIS 287
+Q ++ D TY+T+ N G A+ L+K + + D + YN LIS
Sbjct: 588 LNQG-LTPDIVTYNTLINGLCKVGWTHAALNLLEKLPN-ENVHPDIVTYNILIS 639
>gi|357142282|ref|XP_003572519.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 706
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 126/278 (45%), Gaps = 8/278 (2%)
Query: 131 NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEK 190
ND D +G L++ + + GLVD ++ ++ +M + G A+ YN I+ + G+ ++
Sbjct: 219 NDSPPDDLTFGMLIHSFCQSGLVDRAMGILDRMSKCGCTPGAIVYNEIISCFAELGRVKE 278
Query: 191 IPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVA 250
+ M PD FSY + ++ EM + S D T++TV
Sbjct: 279 ALHLFSCMP---CKPDIFSYNAVLKGLCRAERWEDAGELITEM-VRKDCSPDEVTFNTVI 334
Query: 251 NYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCK 310
++ GL + A+ + + + D Y+ LI+ ++ G ++ ++ L+ + C
Sbjct: 335 SFLCHKGLVDCALEVVDQMPK-YGRKPDNFTYSALINAFSEQGCVEDALEL--LRSMPCS 391
Query: 311 KQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADA 370
Y ++L L + G+ E+ +++ E + D V +I+ Q+G+++
Sbjct: 392 PN-TVCYKSVLKGLCRDGQWEDVGQLIGEMVRNDCAPDEMVFGLIIDCLCQRGLVDCGLE 450
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMK 408
VL+E+ G +P ++ + G+A+ ++ + + K
Sbjct: 451 VLQEVPNYGCSPDVVMYTSLLNGFAEYGRVDDSLKLFK 488
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 111/267 (41%), Gaps = 45/267 (16%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y AL+N + +G V+++L L++ M + + Y ++ GQ E + ++ +M
Sbjct: 365 YSALINAFSEQGCVEDALELLRSMP---CSPNTVCYKSVLKGLCRDGQWEDVGQLIGEMV 421
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
N PD + + I+ R + VLQE V NY
Sbjct: 422 RNDCAPDEMVFGLIIDCLCQRGLVDCGLEVLQE----------------VPNY------- 458
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQ-LNRDYI 318
S D + Y L++ +A G D+ +K + + + CK + +Y+
Sbjct: 459 --------------GCSPDVVMYTSLLNGFAEYGRVDDSLKLF--KSMTCKPNTVTYNYV 502
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
M L K+ E+A K+++E + +I++ QKG++E A V +++
Sbjct: 503 LM--GLCKVELWEDAGKLIDEMVGQECPPNEMTFSILISSLCQKGLVECAIDVFEKMQMY 560
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAFE 405
G TP +S + G ++K ++ A +
Sbjct: 561 GCTPNVIIYSTLNNGLSEKGCVDNALK 587
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 119/279 (42%), Gaps = 10/279 (3%)
Query: 131 NDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEK 190
ND + ++G +++C + GLVD L ++Q++ G + Y ++ ++ +
Sbjct: 423 NDCAPDEMVFGLIIDCLCQRGLVDCGLEVLQEVPNYGCSPDVVMYTSLL---NGFAEYGR 479
Query: 191 IPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVA 250
+ D L K P+ +Y + ++ EM Q + T+S +
Sbjct: 480 VDDSLKLFKSMTCKPNTVTYNYVLMGLCKVELWEDAGKLIDEMVGQECPPNEM-TFSILI 538
Query: 251 NYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCK 310
+ GL E AI +K + + + + + Y+ L + + G D +K L + CK
Sbjct: 539 SSLCQKGLVECAIDVFEKMQ-MYGCTPNVIIYSTLNNGLSEKGCVDNALKL--LNNMSCK 595
Query: 311 KQLNRDYITMLGSLVKIGELEEA-EKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKAD 369
Y + L L + E+A E ++E + C D +II+ Q+G +E A
Sbjct: 596 AD-TICYSSALKGLCRAELWEDAGELIVEMFRKDCP-PDEVTFSIIITNLCQQGFVEYAT 653
Query: 370 AVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMK 408
V ++K TP +S + G+++ ++E A + ++
Sbjct: 654 EVSDLMLKYECTPNIVIYSSLINGFSEHGHLEDALKLLR 692
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 148/348 (42%), Gaps = 20/348 (5%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I L ++ A + M GQG++ + + + + + + T N + +
Sbjct: 202 IIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSK 261
Query: 135 KVDK--LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM---CLYTNTGQHE 189
+ ++ +++ +EG V E+ ++ M + G + Y +M CL + +
Sbjct: 262 ILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAV 321
Query: 190 KIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTV 249
K+ D+ M G PD SY IN Y ++ + +EM + I D TY+T+
Sbjct: 322 KVFDM---MVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIP-DTKTYNTL 377
Query: 250 ANYYIIAGLKEKAIIYLKKCEDIVSKSK--DALGYNHLISHYASLGNKDEMMKFWGLQKI 307
+ G + AI ++V++ + D + Y+ L+ + +E M L+ I
Sbjct: 378 MHGLCHVGRLQDAIALF---HEMVARGQMPDLVTYSILLDSLCKNCHLEEAMAL--LKAI 432
Query: 308 KCKKQLNRD---YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGM 364
+ LN D Y ++ + + GELE A + NI++ G ++G+
Sbjct: 433 E-ASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGL 491
Query: 365 IEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
+ +A+ + E+ +P +++ IA G+ N +A + ++E LA
Sbjct: 492 LNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLA 539
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/357 (20%), Positives = 147/357 (41%), Gaps = 17/357 (4%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
YG L+N + G ++ L++ M++ + Y I+ Q + ++ M
Sbjct: 164 YGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMV 223
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G+ PD F+Y +++ E + +L +M S I D +STV + A K
Sbjct: 224 GQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQM-VNSKILPDVVIFSTVVD----ALCK 278
Query: 260 EKAIIYLKKCEDIVSK---SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
E + + D++ + D + Y L+ + DE +K + + K
Sbjct: 279 EGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVIS 338
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y T++ KI ++++A + EE + D + N ++ G G ++ A A+ E+V
Sbjct: 339 YTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMV 398
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGD 436
+G+ P ++SI+ ++E+A +K A+ N P + + I+D +
Sbjct: 399 ARGQMPDLVTYSILLDSLCKNCHLEEAMALLK---AIEASN--LNPDIQVYNIIIDGMCR 453
Query: 437 NRDVEEVEAFVSSLKIKVQKRNM--YHALTEAHIRSG--QEVDGLLESMKADDIDED 489
++E S+L K ++ Y+ + + G E + L M +D D
Sbjct: 454 AGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPD 510
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 132/313 (42%), Gaps = 11/313 (3%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L++ + G+ + + +KM+E G F + YN +M G+ + V +M+
Sbjct: 236 YTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMR 295
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E GV + +Y I + + V+ +M+S I+ + TY+T+ + + G
Sbjct: 296 ERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYV-INPNLITYNTLIDGFCSVGKL 354
Query: 260 EKAIIYLKKCEDIVSK--SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
KA L C D+ S+ S + YN L+S + G+ K + + K Y
Sbjct: 355 GKA---LSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTY 411
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
++ + + +E A ++ E D ++++ G+ KG + +A + K +V+
Sbjct: 412 TILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVE 471
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDN 437
K P ++ + GY + + +A ++ E K P + S ++ L
Sbjct: 472 KMLEPNEVIYNTMILGYCKEGSSYRALRLFRDM-----EEKELAPNVASYSYLIRVLCKE 526
Query: 438 RDVEEVEAFVSSL 450
R ++E E V +
Sbjct: 527 RKLKEAEDLVEKM 539
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/383 (18%), Positives = 160/383 (41%), Gaps = 47/383 (12%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM-------------CLYTN 184
+LY ++N YV+ +D S+ +M + G + +N ++ C +
Sbjct: 95 RLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNE 154
Query: 185 T---------------------GQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSEL 223
+ G+ EK D+L++++E G P+ Y I+ + E+
Sbjct: 155 SKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEI 214
Query: 224 SSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAI-IYLKKCEDIVSKSKDALGY 282
+++ EM ++ +W TY+ + + G+K++ +Y K E V + Y
Sbjct: 215 EKAKDLFFEMGKFGLVANEW-TYTVLIHGLFKNGIKKQGFEMYEKMQEHGV--FPNLYTY 271
Query: 283 NHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWEL 342
N +++ G + K + + + Y T++G L + + EA K++++ +
Sbjct: 272 NCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKS 331
Query: 343 SCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEK 402
+ N ++ G+ G + KA ++ +++ +G +P+ +++++ +G+ K +
Sbjct: 332 YVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSG 391
Query: 403 AFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK--IKVQKRNMY 460
A + +KE E + +P + ++D + ++E SS++ V + Y
Sbjct: 392 AAKMVKEM-----EERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTY 446
Query: 461 HALTEAHIRSGQ--EVDGLLESM 481
L GQ E L +SM
Sbjct: 447 SVLIHGFCIKGQMNEASRLFKSM 469
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 127/273 (46%), Gaps = 16/273 (5%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
V+ QL R K A +V + M +G++ ++ + + G R +++ E N + D+
Sbjct: 274 VMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIG--GLCREMKANEA--NKVMDQM 329
Query: 135 KVDKL------YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQH 188
K + Y L++ + G + ++LSL + +K G S + YN ++ + G
Sbjct: 330 KSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDT 389
Query: 189 EKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISM--DWGTY 246
++ +M+E G+ P +Y I I+++ ARS+ +ME +Q S + + D TY
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILIDTF-ARSD--NMETAIQLRSSMEELGLVPDVHTY 446
Query: 247 STVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQK 306
S + + + I G +A K + + + + + YN +I Y G+ ++ + +
Sbjct: 447 SVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVI-YNTMILGYCKEGSSYRALRLFRDME 505
Query: 307 IKCKKQLNRDYITMLGSLVKIGELEEAEKMLEE 339
K Y ++ L K +L+EAE ++E+
Sbjct: 506 EKELAPNVASYSYLIRVLCKERKLKEAEDLVEK 538
>gi|255578090|ref|XP_002529915.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530592|gb|EEF32469.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 636
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 95/428 (22%), Positives = 172/428 (40%), Gaps = 57/428 (13%)
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLD-LIGKVRGLESAETYFNSLNDE--DKVDKLY 140
R++ AL+V E + Q ++L ++GK + E A F ++ E D + Y
Sbjct: 134 RWESALKVFELLREQIWYRPYSGMYIKLIVMLGKCKQPEKAHELFQAMIHEGCDVSHESY 193
Query: 141 GALLNCYVREGLVDESLSLMQKMKEMGSFGSALN-YNGIMCLYTNTGQHEKIPDVLLDMK 199
ALL+ Y R GL+D++ SL+++MK ++ Y+ ++ +K +L +M+
Sbjct: 194 TALLSAYGRSGLLDKAFSLLEEMKRNPDCQPDVHTYSILIKSCVQVFAFDKAKTLLSNME 253
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMD-WGTYSTVANYYIIAGL 258
G+ P+ +Y I++YG ME L +M SQ + D W ST+ + I +
Sbjct: 254 SLGISPNTITYNTLIDAYGKAKMFEEMEATLVKMLSQQNCEPDVWTMNSTLRAFGISGQI 313
Query: 259 K--------------EKAIIYLKKCEDIVSKSKD-------------------ALGYNHL 285
+ E +I+ D K+ D + YN +
Sbjct: 314 ETMEKCYEKFQGAGIEPSIMTFNVLLDSYGKAGDYKKMSAVMEYMQKYHYSWTIITYNIV 373
Query: 286 ISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKM---LEEWEL 342
I + G+ +M + L + +++ +T+ + G+ E+ EK+ L E
Sbjct: 374 IDAFGRAGDLKQMEYLFRLMR---SERIKPSCVTLCSLVRAYGQAEKPEKIEGVLRFIEN 430
Query: 343 SCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEK 402
S D N ++ Y + G + VL + +KG P ++ + Y+ K +
Sbjct: 431 SDITLDTVFFNCLVDAYGRMGCFAEMKGVLILMEQKGYRPDKITYRTMIKAYSSKGMTKH 490
Query: 403 AFECMK-EALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNMYH 461
E EA V + N ++ I L +R EV K +RN Y+
Sbjct: 491 VKELQDLEAAGVRKVNN----PCQVIEIIYKTLPQSRGSPEVS--------KADERNHYY 538
Query: 462 ALTEAHIR 469
+L + IR
Sbjct: 539 SLVDPEIR 546
>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
Length = 844
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/342 (20%), Positives = 150/342 (43%), Gaps = 21/342 (6%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I++L K A + + M G+A + +++ +D + K + ++ AE + +
Sbjct: 251 IIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAG 310
Query: 135 KVDK--LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
Y +L++ Y G+ +ES+ + ++M G + N N + G+ +
Sbjct: 311 TRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAK 370
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSE--LSSMENVLQEMESQSHISMDWGTYSTVA 250
+ M G PD SY ++ Y ++ L+ + N+ M ++ I+ + ++ +
Sbjct: 371 CIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKG-IAPNKHVFNILI 429
Query: 251 NYYIIAGLKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMM-KFWGLQKI 307
N Y G+ +KA++ ED+ +K D + + +IS +G D+ + KF + I
Sbjct: 430 NAYARCGMMDKAMLIF---EDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI 486
Query: 308 KCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNI-----ILLGYSQK 362
Y ++ GEL +A++++ E D P + I+ ++
Sbjct: 487 GVPPS-EAVYGCLIQGCCNHGELVKAKELISEMMNK----DIPPPGVKYFSSIINNLCKE 541
Query: 363 GMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
G + + ++ +V+ G+ P +++ + GY NME+AF
Sbjct: 542 GRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAF 583
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 103/258 (39%), Gaps = 42/258 (16%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
++ L+N Y R G++D+++ + + M+ G + + ++ G+ + M
Sbjct: 424 VFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHM 483
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
+ GVPP Y I EL + ++ EM ++ +S++ N
Sbjct: 484 VDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNL----C 539
Query: 259 KEKAIIYLKKCEDIVSKS---KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR 315
KE + K D++ ++ + + +N L+ Y +GN +E
Sbjct: 540 KEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAF---------------- 583
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
+L ++ IG E +CY Y ++ GY + G I+ A V +++
Sbjct: 584 ---ALLDAMASIG-----------IEPNCYIY-----GTLVDGYCKNGRIDDALTVFRDM 624
Query: 376 VKKGKTPTPNSWSIIAAG 393
+ KG PT +SII G
Sbjct: 625 LHKGVKPTSVLYSIILHG 642
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/274 (20%), Positives = 118/274 (43%), Gaps = 10/274 (3%)
Query: 137 DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
D +L+ +V++G VD++ L +M E G L N I+ + +K ++
Sbjct: 210 DDFSYSLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQ 269
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
M ++G+ PD F+Y + I+ + E VL++M ++ + TY+++ + Y I+
Sbjct: 270 KMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQM-VEAGTRPNSITYNSLIHGYSIS 328
Query: 257 GLKEKAIIYLKKCED--IVSKSKDALGYNH-LISHYASLGNKDEMMKFWGLQKIKCKKQL 313
G+ +++ K+ ++ + + H L H G +E + +K K
Sbjct: 329 GMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKH----GRTNEAKCIFDSMVLKGPKPD 384
Query: 314 NRDYITMLGSLVKIGE--LEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAV 371
Y TML + L + + + V NI++ Y++ GM++KA +
Sbjct: 385 IISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLI 444
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
+++ KG P +++ + + ++ A
Sbjct: 445 FEDMQNKGMIPDTVTFATVISSLCRIGRLDDALH 478
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 111/257 (43%), Gaps = 4/257 (1%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ +L+ Y G ++E+ +L+ M +G + Y ++ Y G+ + V DM
Sbjct: 566 FNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDML 625
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEM-ESQSHISMDWGTYSTVANYYIIAGL 258
GV P + Y I ++ ++ + + EM ES + +S+ TY V
Sbjct: 626 HKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIH--TYGVVLGGLCRNNC 683
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
++A + L+K + K D + +N +IS +G + E + + + Y
Sbjct: 684 TDEANMLLEKLFAMNVKF-DIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYS 742
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
M+ +L+K EEA+ + E S + D R+ N I+ K + KA L I +
Sbjct: 743 MMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGEN 802
Query: 379 GKTPTPNSWSIIAAGYA 395
T ++ S++A+ ++
Sbjct: 803 NLTLEASTISLLASLFS 819
>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
Length = 761
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 111/261 (42%), Gaps = 14/261 (5%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+Y L+ Y ++G VDE++ + KM++ G A+ Y ++ + +G+ E M
Sbjct: 343 VYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQM 402
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTY--STVANYYIIA 256
+ G+ P N Y I+ ++ E ++ EM +D G + N I +
Sbjct: 403 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEM-------LDRGICLNTIFFNSIIDS 455
Query: 257 GLKEKAIIYLKKCEDIVSK---SKDALGYNHLISHYASLGNKDEMMKFW-GLQKIKCKKQ 312
KE +I +K D++ + D + Y+ LI Y G DE MK G+ + K
Sbjct: 456 HCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPN 515
Query: 313 LNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
Y T++ KI + +A + +E E S D NIIL G Q A +
Sbjct: 516 -TVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELY 574
Query: 373 KEIVKKGKTPTPNSWSIIAAG 393
I + G ++++II G
Sbjct: 575 VRITESGTQIELSTYNIILHG 595
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/279 (19%), Positives = 121/279 (43%), Gaps = 7/279 (2%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +++ + +D+++ ++ M + G + Y IM Y ++GQ ++ L ++
Sbjct: 234 YSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVR 293
Query: 200 ENGVPPDNF-----SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYI 254
+GV PD +Y + Y + L M +L M ++ I D Y+ + Y
Sbjct: 294 SDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLM-VRNGIHPDHYVYNILICAYA 352
Query: 255 IAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN 314
G ++A++ K + DA+ Y +I G ++ M ++ + N
Sbjct: 353 KQGKVDEAMLVFSKMRQ-QGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGN 411
Query: 315 RDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
Y +++ L + E AE+++ E C + N I+ + ++G + +++ +
Sbjct: 412 IVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDL 471
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAV 413
+V+ G P ++S + GY M++A + + ++V
Sbjct: 472 MVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSV 510
Score = 38.5 bits (88), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 113/282 (40%), Gaps = 51/282 (18%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+ ++++ + +EG V ES L M +G + Y+ ++ Y G+ ++ +L M
Sbjct: 448 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGM 507
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYI---- 254
G+ P+ +YR IN Y S + + +EMES S +S D TY+ +
Sbjct: 508 VSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMES-SGVSPDIITYNIILQGLFQTRR 566
Query: 255 IAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNK---DEMMKFWGLQKIKCKK 311
A KE +Y++ E S ++ L ++I H NK D + F L + K
Sbjct: 567 TAAAKE---LYVRITE---SGTQIELSTYNIILH-GLCKNKLTDDALRMFQNLCLMDLKL 619
Query: 312 QLNRDYITMLGSLVKIGE-----------------------------------LEEAEKM 336
+ R + M+ +L+K+G LEE +++
Sbjct: 620 E-ARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQL 678
Query: 337 LEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
E + D + N I+ Q+G I +A L I +K
Sbjct: 679 FLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEK 720
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/404 (20%), Positives = 167/404 (41%), Gaps = 18/404 (4%)
Query: 16 FTKTNLEIFTRAYRAVKP--VARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQ 73
F + + + A R +P N L S + + D + T ++D++V G +
Sbjct: 61 FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKT-LVDEFVSSGFVPDVVTYS 119
Query: 74 RVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE 133
+ L R R A ++ + MSG G ++ + +D + K E A +L
Sbjct: 120 ILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSS 179
Query: 134 DKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKI 191
V + Y +++ +EG +D++L +++ M + G S + Y +M TG+ ++
Sbjct: 180 GFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEA 239
Query: 192 PDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
+ +M D +Y +N Y S + V+ + +I + Y+ + +
Sbjct: 240 HHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDV----YNALMD 295
Query: 252 YYIIAG-LKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFW-GLQKI 307
Y G L E ++ ED+ + + YN ++ G DE F +
Sbjct: 296 GYCKEGRLDEIPNVF----EDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSA 351
Query: 308 KCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEK 367
C + Y ++ L K + +EA ++L++ + D N ++ + ++ +
Sbjct: 352 GCVPDV-VSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDD 410
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
A +LK ++K G P +++ + +G + N + A+E M E L
Sbjct: 411 AVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEML 454
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/334 (18%), Positives = 144/334 (43%), Gaps = 17/334 (5%)
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YG 141
R V E M+ +G ++ + + +D + K ++ A + S++ V + Y
Sbjct: 302 RLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYN 361
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
+++ + E+ ++ +M + G A+ YN +M + + + +L +M +
Sbjct: 362 IIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKA 421
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
GV PDN +Y I+ + L ++ EM + TY+T+ + G ++
Sbjct: 422 GVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQ 481
Query: 262 AIIYLKKCEDIVSKSKDA--LGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD--- 316
A++ + + + +A + YN I G DE + RD
Sbjct: 482 ALLLM---DHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLS------EMDTLRDEVS 532
Query: 317 YITMLGSLVKIGELEEAEKMLEEW-ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
Y T++ L K +L+ A K+ E + C N+++ +++ +++A +L+ +
Sbjct: 533 YTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELM 592
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
V++G +P+ +++++ + ++KA+E E
Sbjct: 593 VQRGCSPSVITYNMVITCLCKLDKVDKAWELFDE 626
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 123/280 (43%), Gaps = 14/280 (5%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+Y AL++ Y +EG +DE ++ + M G + YN +M G+ ++ L M
Sbjct: 289 VYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESM 348
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
G PD SY I I+ S+ VL +M Q+ I D TY+T+ +
Sbjct: 349 HSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQM-IQAGIPPDAVTYNTLMAQFCKEER 407
Query: 259 KEKAIIYLKKCEDIVSKSKDA--LGYNHLISHYAS---LGNKDEMMKFWGLQKIKCKKQL 313
+ A+ LK +++ D + YN LIS + LG+ E+M + + C
Sbjct: 408 FDDAVGILK---NMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELM--HEMLRNGCVVSA 462
Query: 314 NRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
Y T++ L K G L++A +++ + NI + ++G +++A ++L
Sbjct: 463 CTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLS 522
Query: 374 EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAV 413
E+ S++ + G +++A + +E +AV
Sbjct: 523 EM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAV 559
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 75/366 (20%), Positives = 139/366 (37%), Gaps = 70/366 (19%)
Query: 118 RGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNG 177
RG+ FNS+ D + G + + SL+ M E S YN
Sbjct: 39 RGVTPDTVTFNSIMDG-------------LCKAGKFERAHSLLAVMAERNCRPSCCTYNT 85
Query: 178 I---MCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEME 234
+ +C N + + + D + +G PD +Y I + R + +++EM
Sbjct: 86 LISGLCKQQNVDRAKTLVD---EFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEM- 141
Query: 235 SQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASL 292
S + + + TY+T+ + A EKA L E +VS D + Y ++
Sbjct: 142 SGNGCTPNLVTYNTLIDGLCKASKTEKAYELL---ETLVSSGFVPDVVTYTIIVDGLCKE 198
Query: 293 GNKDEMMKFW-GLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWE---------- 341
G D+ +K G+ K C + Y ++ L + G ++EA + +E
Sbjct: 199 GRLDKALKMVEGMLKRGCTPSVIT-YTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALA 257
Query: 342 ----LSCYCYDFR------------------VPNIILLGYSQKGMIEKADAVLKEIVKKG 379
++ YC R V N ++ GY ++G +++ V +++ +G
Sbjct: 258 YVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRG 317
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAF---ECMKEALAVHE--------ENKFWRPKPSLVS 428
P +++I+ G +++AF E M A V + + F KP
Sbjct: 318 CVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEAR 377
Query: 429 SILDWL 434
+LD +
Sbjct: 378 QVLDQM 383
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 66/328 (20%), Positives = 136/328 (41%), Gaps = 55/328 (16%)
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
M E V PD F+Y I I+ S+ +L EM + ++ D T++++ + AG
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRG-VTPDTVTFNSIMDGLCKAG 59
Query: 258 LKEKA-----IIYLKKCEDIVSKSKDALGYNHLIS----------------HYASLGNKD 296
E+A ++ + C YN LIS + S G
Sbjct: 60 KFERAHSLLAVMAERNCR------PSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVP 113
Query: 297 EMMKFWGLQKIKCKK-------QLNRD------------YITMLGSLVKIGELEEAEKML 337
+++ + L CK+ +L ++ Y T++ L K + E+A ++L
Sbjct: 114 DVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELL 173
Query: 338 EEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADK 397
E S + D II+ G ++G ++KA +++ ++K+G TP+ +++ + G
Sbjct: 174 ETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRT 233
Query: 398 NNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKR 457
+++A KE ++ K S+++ + +E + V ++
Sbjct: 234 GRVDEAHHIFKEMVS-----KDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIR-GTPYI 287
Query: 458 NMYHALTEAHIRSGQ--EVDGLLESMKA 483
++Y+AL + + + G+ E+ + E M
Sbjct: 288 DVYNALMDGYCKEGRLDEIPNVFEDMAC 315
>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 772
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 125/276 (45%), Gaps = 8/276 (2%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +L+ Y +EG VD++L L+ +M+E G + + + YN ++ + G+ E+ ++ +M
Sbjct: 218 YNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEML 277
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+G+ ++Y IN + + ++++EM ++ TY+T+ Y +
Sbjct: 278 NSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFP-TLSTYNTLM--YGLCKWV 334
Query: 260 EKAIIYLKKCEDIVSK-SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR--D 316
+ + L+ + + SK + D + +N L+ Y G E F ++KC+ +
Sbjct: 335 QVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISE--AFLLFDELKCRDLVPTVIT 392
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y T++ L G L+ A ++ +E D I++ G + G + A E++
Sbjct: 393 YNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEML 452
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
KG P +++ G + AF +E LA
Sbjct: 453 SKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLA 488
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 110/256 (42%), Gaps = 8/256 (3%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNS-LNDEDKVDKL-YGALLN 145
AL++ + M+ QGL + + + ++ K+ + A +FN L+ K D+ Y +
Sbjct: 409 ALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIV 468
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
++ + S+ ++M G + YN + G E+ D+L +M +G+ P
Sbjct: 469 GEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIP 528
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
D+ +Y IN + L V EM S+ ++ TY+ + + + + + A +Y
Sbjct: 529 DHVTYTSIINGFVKNGHLRKAREVFNEMLSKG-VAPSVVTYTVLIHAHAAKQMLDLAFMY 587
Query: 266 LKKCEDIVSKSKDA--LGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGS 323
K ++ KS A + YN +I+ DE K++ + K Y ++
Sbjct: 588 FSK---MLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINE 644
Query: 324 LVKIGELEEAEKMLEE 339
+G EEA ++ E
Sbjct: 645 SCNMGYWEEALRLYRE 660
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 85/429 (19%), Positives = 154/429 (35%), Gaps = 51/429 (11%)
Query: 27 AYRAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFK 86
AY ++ V ++ + L V V D+ + G R++R LR
Sbjct: 138 AYWVMERVVSFEMHGVVDVLIAGHVXCLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLS 197
Query: 87 HALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV--DKLYGALL 144
A V M G+ +V + LD K ++ A + + + D Y L+
Sbjct: 198 KAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLV 257
Query: 145 NCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVP 204
N ++G ++++ L+++M G SA YN ++ + G + D++ +M
Sbjct: 258 NGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAF 317
Query: 205 P-----DNFSYRIC--INSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
P + Y +C + G R S M +S + D +++++ Y G
Sbjct: 318 PTLSTYNTLMYGLCKWVQVTGVRLRFSDM--------LKSKFTPDIVSFNSLLYGYCRTG 369
Query: 258 LKEKAIIYLK--KCEDIVSKS--------------------------------KDALGYN 283
+A + KC D+V D Y
Sbjct: 370 CISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYT 429
Query: 284 HLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELS 343
L++ LG F+ K K Y T + +KI + A M EE +
Sbjct: 430 ILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAA 489
Query: 344 CYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
+ D N+ + Q+G E+A +L+ +V G P +++ I G+ ++ KA
Sbjct: 490 GFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKA 549
Query: 404 FECMKEALA 412
E E L+
Sbjct: 550 REVFNEMLS 558
>gi|242039357|ref|XP_002467073.1| hypothetical protein SORBIDRAFT_01g019180 [Sorghum bicolor]
gi|241920927|gb|EER94071.1| hypothetical protein SORBIDRAFT_01g019180 [Sorghum bicolor]
Length = 808
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 121/274 (44%), Gaps = 21/274 (7%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +++ + G V E+ ++ Q + E G + N ++ + G +IP ++ M+
Sbjct: 289 YSTIIHGLCKIGSVSEAFNIFQSVTEEGMELDIVTCNSLINGFRLHGHTREIPKMIEMMR 348
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
GV PD +Y I I + ++ + +++ Q + ++ TYS + N L
Sbjct: 349 GLGVEPDIVTYTILIAGHCEGGDVEEGMKIRKDILGQG-MELNIVTYSVLIN-----ALF 402
Query: 260 EKAIIYLKKCEDI------VSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQ- 312
+K + Y + E++ V D + Y+ LI Y+ LG ++ W L C Q
Sbjct: 403 KKGLFY--EVENLLGEICSVGLELDVIAYSILIHGYSKLGEIGRALQVWNLM---CSSQR 457
Query: 313 ---LNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKAD 369
+ +++++L L K G L+EA LE D + N+++ GY++ G I A
Sbjct: 458 VTPTSVNHVSILLGLCKKGFLDEARSYLETIASKYQPSDVVLYNVVIDGYAKVGDIGNAV 517
Query: 370 AVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
+ I+ G PT + + + GY ++ A
Sbjct: 518 QLYDAIIMAGMCPTIVTCNSLLYGYCKFGDLHMA 551
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 126/306 (41%), Gaps = 39/306 (12%)
Query: 137 DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGS-ALNYNGIMCLYTNTGQHEKIPDVL 195
D + L++ ++ + E+LS +Q++++ G F + +N +M N G + V
Sbjct: 215 DYSHSILIDGLCKQDKIGEALSFLQEIRKEGKFIPLGMTFNTLMSALCNWGFIQDAKSVF 274
Query: 196 LDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYII 255
M + G+ P +Y I+ +S N+ Q + ++ + +D T +++ N + +
Sbjct: 275 CLMLKYGLNPSRHTYSTIIHGLCKIGSVSEAFNIFQSV-TEEGMELDIVTCNSLINGFRL 333
Query: 256 AGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMK--------------- 300
G + I + + + D + Y LI+ + G+ +E MK
Sbjct: 334 HG-HTREIPKMIEMMRGLGVEPDIVTYTILIAGHCEGGDVEEGMKIRKDILGQGMELNIV 392
Query: 301 -FWGLQKIKCKKQLNRDYITMLGSLVKIG----------------ELEEAEKMLEEWELS 343
+ L KK L + +LG + +G +L E + L+ W L
Sbjct: 393 TYSVLINALFKKGLFYEVENLLGEICSVGLELDVIAYSILIHGYSKLGEIGRALQVWNLM 452
Query: 344 CYCYDFRVPNI----ILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNN 399
C ++ ILLG +KG +++A + L+ I K + ++++ GYA +
Sbjct: 453 CSSQRVTPTSVNHVSILLGLCKKGFLDEARSYLETIASKYQPSDVVLYNVVIDGYAKVGD 512
Query: 400 MEKAFE 405
+ A +
Sbjct: 513 IGNAVQ 518
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 57/303 (18%), Positives = 121/303 (39%), Gaps = 51/303 (16%)
Query: 118 RGLESAETY----FNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
+G +SA T ++ + D ++ AL N Y R + ++L ++ KM + S
Sbjct: 125 QGSDSAPTLCDILWSGFKEWDSNSIVWDALANSYARAQMNHDALYVLSKMSSLNMQISIT 184
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
Y+ + LY+ + + ++ +M+ G+PP ++S+ I I+ + ++ + LQE+
Sbjct: 185 TYDSL--LYS-LRKADVALEIFKEMESCGIPPSDYSHSILIDGLCKQDKIGEALSFLQEI 241
Query: 234 ESQSH---ISMDWGTY-STVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHY 289
+ + M + T S + N+ I K + LK
Sbjct: 242 RKEGKFIPLGMTFNTLMSALCNWGFIQDAKSVFCLMLK---------------------- 279
Query: 290 ASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDF 349
+GL + Y T++ L KIG + EA + + D
Sbjct: 280 ------------YGLNPSR------HTYSTIIHGLCKIGSVSEAFNIFQSVTEEGMELDI 321
Query: 350 RVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
N ++ G+ G + +++ + G P +++I+ AG+ + ++E+ + K+
Sbjct: 322 VTCNSLINGFRLHGHTREIPKMIEMMRGLGVEPDIVTYTILIAGHCEGGDVEEGMKIRKD 381
Query: 410 ALA 412
L
Sbjct: 382 ILG 384
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 84/386 (21%), Positives = 164/386 (42%), Gaps = 37/386 (9%)
Query: 84 RFKHALQVSEWMSGQ-GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED------KV 136
R + L + E M Q G A + +D K +E + F+ +N E V
Sbjct: 398 RQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTV 457
Query: 137 DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
+ L G + R G V +++ + + G G A+ Y ++ + N EK ++
Sbjct: 458 NTLVGGM----CRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFN 513
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
+M ++G PD Y I+ + ++ VL E++ + I D Y+T+ +
Sbjct: 514 EMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELK-KLGIRPDTVCYNTLIGGFCRT 572
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
+ LK+ E+ K D + YN LI+ YAS K+ +KF K K
Sbjct: 573 NKFHRVFEMLKEMEEAGLKP-DTITYNTLIA-YAS---KNGDLKFAQKVMRKMIKAGVVP 627
Query: 317 YITMLGSLVKI----GELEEAEKMLEEWELSCYCYDFRVP------NIILLGYSQKGMIE 366
+ G+++ G EA ++ ++ + + +VP NI++ + ++
Sbjct: 628 TVATYGAVINAYCLNGNGNEAMEIFKDMKAAS-----KVPPNTVIYNILINSLCKNNKVK 682
Query: 367 KADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSL 426
A ++++++ G TP +++ I G D+ ++EK FE M + H N P
Sbjct: 683 SAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIE-HACN----PDYIT 737
Query: 427 VSSILDWLGDNRDVEEVEAFVSSLKI 452
+ + +WL ++E ++ FV+ ++
Sbjct: 738 MEILTEWLSAVGEIERLKKFVAGCEV 763
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 147/361 (40%), Gaps = 32/361 (8%)
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMG------SFGSALNYNGIMCLYTNTGQHEKIPDVL 195
+LL REG + LM+KM EM +FG +N+ MC + ++ + +
Sbjct: 310 SLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINH---MCKFRRVDDALEVLEKM 366
Query: 196 LDMKENG-----VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVA 250
KE+G V PD Y I+ +++ M SQ + D TY+ +
Sbjct: 367 SGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLI 426
Query: 251 NYYIIAGLKEKAIIYLKKCEDIVSK---SKDALGYNHLISHYASLGNKDEMMKFWGLQKI 307
+ + AG EK K+ D ++K + + + N L+ G + F+ +
Sbjct: 427 DGFCKAGEIEKG----KELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQR 482
Query: 308 KCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEK 367
+ K Y ++ + + E+A ++ E S D V ++ G+SQ G +
Sbjct: 483 RGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMAD 542
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLV 427
A VL E+ K G P ++ + G+ N + FE +KE E +P
Sbjct: 543 ASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEM-----EEAGLKPDTITY 597
Query: 428 SSILDWLGDNRDVEEVEAFVSSLKIK---VQKRNMYHALTEAHI--RSGQEVDGLLESMK 482
++++ + N D++ + + + IK V Y A+ A+ +G E + + MK
Sbjct: 598 NTLIAYASKNGDLKFAQKVMRKM-IKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMK 656
Query: 483 A 483
A
Sbjct: 657 A 657
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/385 (20%), Positives = 159/385 (41%), Gaps = 75/385 (19%)
Query: 140 YGALLNCYVREGLVDESLSLMQKM---KEMGSFGSALN-----YNGIMCLYTNTGQHEKI 191
+G L+N + VD++L +++KM KE G ++ YN ++ G+ ++
Sbjct: 343 FGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEG 402
Query: 192 PDVLLDMK-ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQ----SHISMD---- 242
++ M+ + G PD +Y I+ + E+ + + EM + + ++++
Sbjct: 403 LGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVG 462
Query: 243 ----WGTYSTVANYYIIA---GLKEKAIIY------------LKKCEDIVSK------SK 277
G S+ N+++ A G+K A+ Y +K ++ ++ S
Sbjct: 463 GMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSP 522
Query: 278 DALGYNHLISHYASLGN-KDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKM 336
DA+ Y LIS ++ G D L+K+ + Y T++G + + +M
Sbjct: 523 DAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPD-TVCYNTLIGGFCRTNKFHRVFEM 581
Query: 337 LEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYAD 396
L+E E + D N ++ S+ G ++ A V+++++K G PT ++ + Y
Sbjct: 582 LKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCL 641
Query: 397 KNNMEKAFECMKE-----------------------------ALAVHEENKFW--RPKPS 425
N +A E K+ A+++ E+ K W P +
Sbjct: 642 NGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTT 701
Query: 426 LVSSILDWLGDNRDVEEVEAFVSSL 450
++I L D +D+E+V F+ +
Sbjct: 702 TYNAIFKGLRDEKDLEKVFEFMDRM 726
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 105/240 (43%), Gaps = 36/240 (15%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+Y L++ + + G + ++ ++ ++K++G + YN ++ + T + ++ ++L +M
Sbjct: 526 VYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEM 585
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
+E G+ PD +Y I +L + V+++M ++ + TY V N Y + G
Sbjct: 586 EEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKM-IKAGVVPTVATYGAVINAYCLNGN 644
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYA------SLGNKDEMMKFWGL-------- 304
+A+ K + + + YN LI+ S + E MK WG+
Sbjct: 645 GNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYN 704
Query: 305 ---QKIKCKKQL---------------NRDYITM---LGSLVKIGELEEAEKMLEEWELS 343
+ ++ +K L N DYITM L +GE+E +K + E+S
Sbjct: 705 AIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIERLKKFVAGCEVS 764
>gi|224121668|ref|XP_002330623.1| predicted protein [Populus trichocarpa]
gi|222872227|gb|EEF09358.1| predicted protein [Populus trichocarpa]
Length = 202
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 31/210 (14%)
Query: 226 MENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHL 285
ME +L +ME S I +W + A Y+ A EK LK+ E ++ ++ Y +L
Sbjct: 1 MEKLLMKMERDSRI--NWKVCVSAAKGYLKASFTEKTSTMLKQSEQLIKFNERRYAYKNL 58
Query: 286 ISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCY 345
+S YA G+KDE+ +F K N Y+ M+ L+K + AE
Sbjct: 59 LSLYAGTGSKDELYRFRNFFKNSAGFN-NSSYLHMISLLMKSDGKDVAE----------- 106
Query: 346 CYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
+KG+ EK +A ++ + G +S+ +AAGY M KA E
Sbjct: 107 ---------------EKGLWEKDEAFVRIVESSGVELNADSFVHLAAGYCVAGQMVKAAE 151
Query: 406 CMKEALAVHEENKFWRPKPSLVSSILDWLG 435
MK+A+++ W+P +++ L G
Sbjct: 152 TMKKAISISTPE--WKPNTKALAACLKCQG 179
>gi|357491817|ref|XP_003616196.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517531|gb|AES99154.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 981
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 141/342 (41%), Gaps = 49/342 (14%)
Query: 111 LDLIGKVRGL-ESAETYFNSLNDEDKVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGS 168
+DL GK L ++A+ + + + +D + L+ G + E+ SL+ KM+E G
Sbjct: 300 IDLYGKAGRLKDAADVFADMMKSGVAMDTCTFNTLIFISGSHGNLLEAESLLDKMEERGI 359
Query: 169 FGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMEN 228
+ YN + LY G + ++E G+ PD +YR + + + + ++E
Sbjct: 360 SSNTRTYNIFLSLYATAGSIDAALSYYRRIREVGLFPDTVTYRALLGALCTENMVQAVEG 419
Query: 229 VLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKK--------CEDIVS------ 274
V+ EME S +S+D + S + YI G +KA L+K C I+
Sbjct: 420 VIDEMEKNS-VSLDALSLSGIVKMYINEGDVDKANDLLQKYGEPPSFICAAIIDAFAEKG 478
Query: 275 -----------------KSKDALGYNHLISHYASLGNKD------EMMKFWGLQKIKCKK 311
+++D L +N +I Y + D E MK+ G I
Sbjct: 479 FWAEAENIFYRKRDKARQARDILEFNVMIKAYGKANHYDKAVLLFEEMKYQG---ISPAD 535
Query: 312 QLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAV 371
I ML + + + ++E +C F + ++ Y++ G + A V
Sbjct: 536 STYNSIIQMLSGADLVDQARDLTVEMQEMGFKPHCQTF---SAVIGCYARLGQLSDAVIV 592
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA---FECMKEA 410
+E++ G P + + G+A+ +++A F M+E+
Sbjct: 593 YQEMISAGVKPNETVYGALINGFAEHGRLDEALQYFHLMQES 634
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 153/345 (44%), Gaps = 40/345 (11%)
Query: 151 GLVDESLSLMQKMKEMGSFGSALN--YNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNF 208
G + +S L M+E+ L+ YN ++ LY G+ + DV DM ++GV D
Sbjct: 270 GGIRDSNMLSMDMEEIAPLKPRLSTTYNTLIDLYGKAGRLKDAADVFADMMKSGVAMDTC 329
Query: 209 SYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKK 268
++ I G+ L E++L +ME + IS + TY+ + Y AG + A+ Y ++
Sbjct: 330 TFNTLIFISGSHGNLLEAESLLDKMEERG-ISSNTRTYNIFLSLYATAGSIDAALSYYRR 388
Query: 269 CEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKI- 327
+ V D + Y L+ +L ++ + G+ K ++ D +++ G +VK+
Sbjct: 389 IRE-VGLFPDTVTYRALL---GALCTENMVQAVEGVIDEMEKNSVSLDALSLSG-IVKMY 443
Query: 328 ---GELEEAEKMLEEW--ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTP 382
G++++A +L+++ S C I+ +++KG +A+ + K +
Sbjct: 444 INEGDVDKANDLLQKYGEPPSFIC------AAIIDAFAEKGFWAEAENIFYRKRDKARQA 497
Query: 383 TPN-SWSIIAAGYADKNNMEKAFECMKEALAVHEENKFW--RPKPSLVSSILDWLGDNRD 439
++++ Y N+ +K A+ + EE K+ P S +SI+ L
Sbjct: 498 RDILEFNVMIKAYGKANHYDK-------AVLLFEEMKYQGISPADSTYNSIIQMLSGADL 550
Query: 440 VEEVEAFVSSLKIKVQKRNM------YHALTEAHIRSGQEVDGLL 478
V++ L +++Q+ + A+ + R GQ D ++
Sbjct: 551 VDQAR----DLTVEMQEMGFKPHCQTFSAVIGCYARLGQLSDAVI 591
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 109/246 (44%), Gaps = 17/246 (6%)
Query: 70 LELQRVIRQLRSRKRFKHALQVSEWMSGQGL--AFSVHDHAVQL----DLIGKVRGL--E 121
LE +I+ + A+ + E M QG+ A S ++ +Q+ DL+ + R L E
Sbjct: 501 LEFNVMIKAYGKANHYDKAVLLFEEMKYQGISPADSTYNSIIQMLSGADLVDQARDLTVE 560
Query: 122 SAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCL 181
E F + + A++ CY R G + +++ + Q+M G + Y ++
Sbjct: 561 MQEMGFKPHC------QTFSAVIGCYARLGQLSDAVIVYQEMISAGVKPNETVYGALING 614
Query: 182 YTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISM 241
+ G+ ++ M+E+G+ + + SY +L ++++ ++M++ + +
Sbjct: 615 FAEHGRLDEALQYFHLMQESGLSANLVVLTTLMKSYSKAGDLKGVKSIYKQMQNMEGV-L 673
Query: 242 DWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKF 301
D S++ + GL +A + +K ++ + D+ Y ++ Y +G DE +K
Sbjct: 674 DLAARSSMITAFAELGLVSEAKLTFEKFKE--TGQADSTSYGIMMYVYKDIGMIDEAIKI 731
Query: 302 WGLQKI 307
KI
Sbjct: 732 AEEMKI 737
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 50/273 (18%), Positives = 115/273 (42%), Gaps = 44/273 (16%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ ++ Y + D+++ L ++MK G + YN I+ + + ++ D+ ++M+
Sbjct: 503 FNVMIKAYGKANHYDKAVLLFEEMKYQGISPADSTYNSIIQMLSGADLVDQARDLTVEMQ 562
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E G P ++ I Y +LS V QEM I AG+K
Sbjct: 563 EMGFKPHCQTFSAVIGCYARLGQLSDAVIVYQEM--------------------ISAGVK 602
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI- 318
+Y LI+ +A G DE ++++ L + + L+ + +
Sbjct: 603 PNETVY-----------------GALINGFAEHGRLDEALQYFHLMQ---ESGLSANLVV 642
Query: 319 --TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
T++ S K G+L+ + + ++ + D + ++ +++ G++ +A ++
Sbjct: 643 LTTLMKSYSKAGDLKGVKSIYKQMQNMEGVLDLAARSSMITAFAELGLVSEAKLTFEKFK 702
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
+ G+ + S+ I+ Y D +++A + +E
Sbjct: 703 ETGQADS-TSYGIMMYVYKDIGMIDEAIKIAEE 734
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 96/226 (42%), Gaps = 9/226 (3%)
Query: 119 GLES-AETYFNSLNDEDKVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYN 176
GL S A+ F + + D YG ++ Y G++DE++ + ++MK G ++YN
Sbjct: 689 GLVSEAKLTFEKFKETGQADSTSYGIMMYVYKDIGMIDEAIKIAEEMKISGLLRDCVSYN 748
Query: 177 GIMCLYTNTGQHEKIPDVLLDM-KENGVPPDNFSYRICINSYGARSELSSMENVLQEMES 235
++ Y Q K ++L +M + PD+ + + + L E ++ E
Sbjct: 749 RVLTCYAINRQFHKCGELLYEMIVSKKLLPDDGTLIVLF------TILKKAEFPVEAAEQ 802
Query: 236 QSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNK 295
+ Y++ A Y + L + LK + ++ + YN I YAS G+
Sbjct: 803 LELCYQEGKPYASQATYTALYSLLGMHTLALKFAQTVLENLDSSAAYNVAIYAYASAGDV 862
Query: 296 DEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWE 341
++ + + K + YI ++G K G +E +K+ +E
Sbjct: 863 EKALNIHMKMRDKHVEPDIVTYINLVGCYGKAGMVEGVKKIHSLFE 908
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 145/335 (43%), Gaps = 8/335 (2%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+IR L R R +AL V E M +G V + + L+ K G + A + ++D+
Sbjct: 172 LIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKG 231
Query: 135 KVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+ Y +LN +EG V++++ ++ + G + ++YN ++ + E
Sbjct: 232 CAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAE 291
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
++ +M G PP+ ++ + I+ R + VL++M Q + + +Y+ + +
Sbjct: 292 KLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQM-PQYGCTPNSLSYNPLLHA 350
Query: 253 YIIAGLKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCK 310
+ KA+ ++ E +VS+ D + YN L++ G D ++ K K
Sbjct: 351 FCKQKKIHKAMEFV---ELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGC 407
Query: 311 KQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADA 370
+ Y T++ L K G+ +EA ++L+E D + I G ++ IE+A
Sbjct: 408 SPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVR 467
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
++ G PT ++ I G + A +
Sbjct: 468 TFCKVQDMGIRPTAALYNAILLGLCKRRETHNAID 502
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 102/232 (43%), Gaps = 7/232 (3%)
Query: 175 YNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEME 234
YN ++ Y GQ + ++ DM V PD ++Y I R S+ VL++M
Sbjct: 137 YNAMVAGYCGAGQLDAARRLVADMP---VEPDAYTYNTLIRGLCGRGRTSNALAVLEDMF 193
Query: 235 SQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGN 294
+ + D TY+ + ++A+ L + D + D + YN +++ G
Sbjct: 194 RRGCLP-DVVTYTILLEATCKRSGYKQAMKLLDEMHD-KGCAPDIVTYNVVLNGICQEGR 251
Query: 295 KDEMMKFW-GLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPN 353
++ M+F L C+ Y +L L E+AEK++EE + N
Sbjct: 252 VEDAMEFLKNLPSYGCEPN-TVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFN 310
Query: 354 IILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
+++ ++G++E A VL+++ + G TP S++ + + + + KA E
Sbjct: 311 MLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAME 362
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 111/273 (40%), Gaps = 51/273 (18%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ L++ R GLV+ ++ ++++M + G ++L+YN ++ + + K + + M
Sbjct: 309 FNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMV 368
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY-YIIAGL 258
G PD SY + + E+ +L +++ D G + +Y +I GL
Sbjct: 369 SRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLK-------DKGCSPVLISYNTVIDGL 421
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
+ K+K+AL L+ S G + +++ Y
Sbjct: 422 TK------------AGKTKEAL---ELLDEMTSKGLQPDIIT----------------YS 450
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRV-P-----NIILLGYSQKGMIEKADAVL 372
T+ L + +EEA + C D + P N ILLG ++ A +
Sbjct: 451 TIASGLCREDRIEEAVRTF------CKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLF 504
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
++ G P ++++I+ G A + +++A E
Sbjct: 505 AYMISSGCMPNESTYTILVEGLAYEGLVKEARE 537
>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
Length = 1153
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 146/335 (43%), Gaps = 13/335 (3%)
Query: 86 KHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYG--AL 143
+ +++ M G ++ + +D + +V L+ A F+ + ++ + Y +L
Sbjct: 335 QSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSL 394
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
++ +++ + D +L L M G + + + Y +GQ K MK G+
Sbjct: 395 ISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGI 454
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAI 263
PD + ++S L + V E++ +S D TY+ + A ++A+
Sbjct: 455 VPDVAAANAVLSSLARSGRLGMAKRVFYELKDMG-VSPDTITYTMMIKCCSKASKADEAM 513
Query: 264 IYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMK-FWGLQKIKCKKQLNRDYITM 320
+ D+V D L N LI G +E K F L+++K + N Y T+
Sbjct: 514 NFFS---DMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPT-NGTYNTL 569
Query: 321 LGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGK 380
L L + G+++E +LEE S + + N +L S+ G + A +L + +KG
Sbjct: 570 LSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGC 629
Query: 381 TPTPNSWSIIAAGYADKNNMEKAFE--C-MKEALA 412
TP +S++ + G + E+AF C MK+ LA
Sbjct: 630 TPDLSSYNTVMYGLIKEERFEEAFRMFCQMKKILA 664
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 129/317 (40%), Gaps = 16/317 (5%)
Query: 79 LRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV-- 136
+R+ R QV + M Q + +V A +G GL SA + +
Sbjct: 118 MRAHGRVGDMAQVFDLMQKQIVKANVGTFATVFSGVGVQGGLRSAPVALPVMREAGMSLN 177
Query: 137 DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
Y L+ V+ G E++ + + M E G S Y+ +M + + + +L
Sbjct: 178 GYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLN 237
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
+M+ GV P+ +SY ICI G + +L +ME S D T++ V A
Sbjct: 238 EMEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKME-DSGCKPDVVTHTVVIQVLCDA 296
Query: 257 GLKEKA--IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN 314
G A + + K D + D + Y L+ G+ +M+ W
Sbjct: 297 GRLSDAKDVFWKMKASD---QKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNI 353
Query: 315 RDYITMLGSLVKIGELEEAEKMLEEWE---LSCYCYDFRVPNIILLGYSQKGMIEKADAV 371
Y ++ +L ++G L+EA + +E + +S Y + N ++ G+ + M ++A +
Sbjct: 354 VSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSY---NSLISGFLKADMFDRALEL 410
Query: 372 LKEIVKKGKTPTPNSWS 388
+ G P+PN ++
Sbjct: 411 FNHMNACG--PSPNGYT 425
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 125/307 (40%), Gaps = 44/307 (14%)
Query: 155 ESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICI 214
E+ L K K +G +YN ++ + + D+ +MK G PD F+Y + +
Sbjct: 756 EAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLIL 815
Query: 215 NSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVS 274
++ G + M V EM + + S + TY+T II+GL + K+ E +
Sbjct: 816 DAMGKSMRIEEMLRVQAEMHRKGYES-TYVTYNT-----IISGLVKS-----KRLEQAID 864
Query: 275 KSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAE 334
Y +L+S G C Y +L L+K G++ +AE
Sbjct: 865 L------YYNLMSE--------------GFSPTPCT------YGPLLDGLLKAGKMVDAE 898
Query: 335 KMLEEW-ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAG 393
+ E E C + + NI+L G+ G E + +++V++G P S++++
Sbjct: 899 NLFNEMLEYGCK-PNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDT 957
Query: 394 YADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK 453
+ ++ L + E P + + ++D LG + +EE + +K K
Sbjct: 958 LCTAGRLNDGLSYFRQLLELGLE-----PDLIIYNLLIDGLGKSERIEEAVCLFNEMKKK 1012
Query: 454 VQKRNMY 460
N+Y
Sbjct: 1013 GIVPNLY 1019
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 80/382 (20%), Positives = 148/382 (38%), Gaps = 59/382 (15%)
Query: 69 ELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESA-ETYF 127
E ++ + R + L+V M +G + + + + K + LE A + Y+
Sbjct: 808 EFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYY 867
Query: 128 NSLNDE-DKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTG 186
N +++ YG LL+ ++ G + ++ +L +M E G + YN ++ + G
Sbjct: 868 NLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAG 927
Query: 187 QHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTY 246
E + + M E G+ PD SY + I++ L+ + +++
Sbjct: 928 NTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQL------------- 974
Query: 247 STVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQK 306
+ GL+ IIY + D LG + I L N EM K +
Sbjct: 975 -------LELGLEPDLIIY--------NLLIDGLGKSERIEEAVCLFN--EMKKKGIVPN 1017
Query: 307 IKCKKQLNRDYITMLGSLVKIGELEEAEKMLEE-----WELSCYCYDFRVPNIILLGYSQ 361
+ Y +++ L K G+ EA +M EE W+ + + Y N ++ GYS
Sbjct: 1018 L-------YTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTY-----NALIRGYSV 1065
Query: 362 KGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWR 421
G + A A + T + +G D+N + A E L + +
Sbjct: 1066 SGSTDNAYAAYDCVAVGVSLKTA-----LISGLVDENLINIA-----EGLFAEMKRRGCG 1115
Query: 422 PKPSLVSSILDWLGDNRDVEEV 443
P + ILD +G + +EE+
Sbjct: 1116 PDQFTYNLILDAIGKSMRIEEM 1137
>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 701
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 84/406 (20%), Positives = 170/406 (41%), Gaps = 62/406 (15%)
Query: 82 RKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL-- 139
+++ + A+ + +WM Q L V + ++ + KV L A F+ ++ V +
Sbjct: 164 KQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTC 223
Query: 140 YGALLNCYVREGLVDESLSLMQKM-KEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
Y L++ + + G D+ + +++ K+ + + + YN ++ G+ ++ ++ M
Sbjct: 224 YNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERM 283
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG- 257
+N D F+Y I+ + V +E+ +S + +D T++ + N + AG
Sbjct: 284 TKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEI-VESSLVVDAVTHNAMLNGFCRAGK 342
Query: 258 LKEKAIIYL----KKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKK-- 311
+KE +++ + C+ +VS YN LI G +E + W L CKK
Sbjct: 343 IKESFELWMVMGKENCQTVVS-------YNILIKGLFENGKVEEAISIWELL---CKKGC 392
Query: 312 ------------------QLNRD------------------YITMLGSLVKIGELEEAEK 335
+LN+ Y +M+ L K G ++EA
Sbjct: 393 RPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAIS 452
Query: 336 MLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYA 395
++ + + Y D V N ++ G+ + +E A +E+ KG +PT S++ + G
Sbjct: 453 IVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLC 512
Query: 396 DKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVE 441
+A+ +KE L K W+P S ++D L + +E
Sbjct: 513 KAERFSEAYSFVKEML-----EKEWKPDMITCSLLMDGLCQEKKIE 553
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/305 (20%), Positives = 119/305 (39%), Gaps = 35/305 (11%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y LLN +V D + S + + M + YN ++ + Q EK +L M
Sbjct: 119 YNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMW 178
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ PD FSY IN +L V EM + ++ D Y+ + + + G
Sbjct: 179 SQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVA-DVTCYNMLIDGFFKHGDY 237
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
+K ++ S + + YN +I+ G DE ++ W +++ Y +
Sbjct: 238 DKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSS 297
Query: 320 MLGSLVKIGELEEAEKMLEEW--------------ELSCYCYDFRVP------------- 352
++ L + G ++ A ++ +E L+ +C ++
Sbjct: 298 LIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKEN 357
Query: 353 -------NIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
NI++ G + G +E+A ++ + + KKG P ++ ++ G + KA +
Sbjct: 358 CQTVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALK 417
Query: 406 CMKEA 410
KEA
Sbjct: 418 IFKEA 422
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 136/329 (41%), Gaps = 24/329 (7%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLND-E 133
+I+ L + + A+ + E + +G + V + + K L A F D
Sbjct: 367 LIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGP 426
Query: 134 DKVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
K+D Y ++++ +EG +DE++S++ +M + G N ++ + + E
Sbjct: 427 GKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAI 486
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
+ +M+ G P SY I S + ++EM + +W +
Sbjct: 487 NFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEM-----LEKEWKPDMITCSL 541
Query: 253 YIIAGLKEKAI-IYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWG-LQKIK 308
+ +EK I + L + + K D YN L+ S+ ++ ++ + +++
Sbjct: 542 LMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRST 601
Query: 309 CKKQL-NRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGM--- 364
C L R+ T++ L K+ + E+A E W+ C D P+II + KG+
Sbjct: 602 CVPNLVTRN--TLMEGLYKVRDYEKAS---EIWD--CILKDGLHPDIISYNITIKGLCSC 654
Query: 365 --IEKADAVLKEIVKKGKTPTPNSWSIIA 391
I A L + + +G PT +W+I+
Sbjct: 655 SRISDAIEFLNDALNRGILPTAVTWNILV 683
>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 822
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 155/358 (43%), Gaps = 30/358 (8%)
Query: 48 DPDVSLTPVLDQWVLEGQKISELE--LQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVH 105
+PD++ +L + G +I E E L+R + +F + + + QG
Sbjct: 342 EPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCK-QG------ 394
Query: 106 DHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL-YGALLNCYVREGLVDESLSLMQKMK 164
D+ + D++ K+ AET DK D + YGA ++ V G +D +L + +KM
Sbjct: 395 DYVMASDMLFKI-----AET-------GDKPDLVSYGAFIHGSVAGGEIDVALMVREKMM 442
Query: 165 EMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELS 224
E G F A YN +M G+ +L +M + + PD + Y ++ + +EL
Sbjct: 443 EKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELD 502
Query: 225 SMENVLQEMESQSHISMDWGT--YSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGY 282
+ + + S+ +D G Y+ + G A+ Y+ K + I + + D +
Sbjct: 503 KATELFEVVMSK---GIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMK-IANHAPDEYTH 558
Query: 283 NHLISHYASLGNKDEMMKFWGLQKIKCKKQLN-RDYITMLGSLVKIGELEEAEKMLEEWE 341
+ +I Y + D +K +G Q +K K + N Y +++ KI ++ AEK+ +
Sbjct: 559 STVIDGYVKQHDLDSALKMFG-QMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQ 617
Query: 342 LSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNN 399
+ I++ G+S+ G EKA + + ++ P ++ + G + N
Sbjct: 618 SFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLTNITN 675
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 68/363 (18%), Positives = 151/363 (41%), Gaps = 40/363 (11%)
Query: 85 FKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLN--DEDKVDKLYGA 142
K A +V E + +G ++ + +D K + + N +N + K++ +
Sbjct: 256 LKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNS 315
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
+++ + GLVD++ +M+ M EMG YN ++ + G+ ++ + L KE
Sbjct: 316 IIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERT 375
Query: 203 VPPDNFSYRICINSY-------------------GARSELSSMENVLQEMESQSHIS--- 240
+ P+ FSY +++Y G + +L S + + I
Sbjct: 376 LLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVAL 435
Query: 241 ------MDWGTYSTVANYYII-AGLKEK-----AIIYLKKCEDIVSKSKDALGYNHLISH 288
M+ G + Y ++ +GL +K A + L + D+ + DA Y L+
Sbjct: 436 MVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDL-NLQPDAYMYATLVDG 494
Query: 289 YASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYD 348
+ D+ + + + K Y M+ L K G++ +A + + +++ + D
Sbjct: 495 FIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPD 554
Query: 349 FRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGY---ADKNNMEKAFE 405
+ ++ GY ++ ++ A + +++K+ P +++ + G+ AD + EK F
Sbjct: 555 EYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFR 614
Query: 406 CMK 408
M+
Sbjct: 615 AMQ 617
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 127/315 (40%), Gaps = 47/315 (14%)
Query: 97 GQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVD 154
G G +V + V +D K L+ A F L + + L YGAL++ + + G
Sbjct: 233 GNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQ 292
Query: 155 ESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICI 214
L+ +M MG + +N I+ G +K +++ M E G PD +Y I I
Sbjct: 293 VVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILI 352
Query: 215 NSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVS 274
N + + E L+ + ++ + + +Y+ + + Y
Sbjct: 353 NFSCSGGRIKEAEEFLERAKERTLLPNKF-SYTPLMHAY--------------------C 391
Query: 275 KSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEA- 333
K D + + ++ A G+K +++ + + GS V GE++ A
Sbjct: 392 KQGDYVMASDMLFKIAETGDKPDLVSYGAF---------------IHGS-VAGGEIDVAL 435
Query: 334 ---EKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSII 390
EKM+E+ D ++ N+++ G +KG A +L E++ P ++ +
Sbjct: 436 MVREKMMEKGVFP----DAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATL 491
Query: 391 AAGYADKNNMEKAFE 405
G+ N ++KA E
Sbjct: 492 VDGFIRNNELDKATE 506
>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
Length = 545
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 143/324 (44%), Gaps = 6/324 (1%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
V+R L S + A +V + MSG + ++ + + +D + K R ++ A T F + D+
Sbjct: 177 VLRGLCSGGKISMAWEVFKDMSGI-FSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKA 235
Query: 135 KVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+ YGAL++ ++ V E+ L ++ + G + + YN ++ G+ E
Sbjct: 236 IYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENAL 295
Query: 193 DVLLDM-KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN 251
+ DM +E + PD F+Y IN + + +EM + S D TY+T+ +
Sbjct: 296 TLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEM-LDTGCSPDVVTYNTLLD 354
Query: 252 YYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKK 311
+G ++KA+ +K + + Y LI + + + +K + +
Sbjct: 355 GLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLL 414
Query: 312 QLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAV 371
+ T++ L K ++EA ++ E +C D + N +L GY + I+ A +
Sbjct: 415 PDAVTFTTVIQKLCKESRIDEAHELFESIGKTCK-PDSVLFNTMLAGYCKITRIDDAKKL 473
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYA 395
++ G PT +++ + G+
Sbjct: 474 HDRMLDSGCAPTLATYTALVTGFC 497
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/272 (19%), Positives = 117/272 (43%), Gaps = 17/272 (6%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP---DVLL 196
Y +++ + VD++++L ++M + + + Y ++ G+ ++ D+
Sbjct: 208 YTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALI---DGLGKQRRVKEAYDLFE 264
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
+ + G P +Y I+ + + + +M + H+ D TYS + N ++
Sbjct: 265 EARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLS 324
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
EKA ++ D S D + YN L+ G +D+ M+ + +K+ + +
Sbjct: 325 NRGEKAYELYEEMLD-TGCSPDVVTYNTLLDGLCKSGCEDKAMEIF--RKMGVGNVCDPN 381
Query: 317 YIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLK 373
IT ++ K+ L +A K+ +E E D ++ ++ I++A + +
Sbjct: 382 VITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFE 441
Query: 374 EIVKKGKTPTPNS--WSIIAAGYADKNNMEKA 403
I GKT P+S ++ + AGY ++ A
Sbjct: 442 SI---GKTCKPDSVLFNTMLAGYCKITRIDDA 470
>gi|297843920|ref|XP_002889841.1| hypothetical protein ARALYDRAFT_888388 [Arabidopsis lyrata subsp.
lyrata]
gi|297335683|gb|EFH66100.1| hypothetical protein ARALYDRAFT_888388 [Arabidopsis lyrata subsp.
lyrata]
Length = 665
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 87/433 (20%), Positives = 178/433 (41%), Gaps = 49/433 (11%)
Query: 71 ELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSL 130
+L ++R R++ +Q+ +WM G SV ++ + +G + + A + S+
Sbjct: 101 DLNVILRDFGISGRWQDLIQLFDWMQQHG-KISVSTYSSCIKFVG-AKNVSKALEIYQSI 158
Query: 131 NDEDKVDKLY--GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNG----------- 177
DE +Y ++L+C V+ G +D + L +MK G + YN
Sbjct: 159 PDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRGGLKPDVITYNTLLAGCIKVKNG 218
Query: 178 -------------------------IMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
++ + + G+ E+ + + MK G P+ + Y
Sbjct: 219 YPKAVELIGELPHNGIQMDSVMYGTVLAICASNGRCEEAENFIQQMKAEGHSPNIYHYSS 278
Query: 213 CINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDI 272
+NSY + + + ++ EM+S + + +T+ YI GL +++ L + E
Sbjct: 279 LLNSYSWKGDYKKADELMTEMKSIGLVP-NKVMMTTLLKVYIKGGLFDRSRELLSELES- 336
Query: 273 VSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEE 332
+++ + Y L+ + G +E + K K K M+ +L + EE
Sbjct: 337 AGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVKSDGYANSIMISALCRSKRFEE 396
Query: 333 AEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAA 392
A+++ + E + D + N +L Y + G +E ++K++ ++ P N++ I+
Sbjct: 397 AKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAIIPDYNTFHILIK 456
Query: 393 GYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKI 452
+ + A++ L +H +K R + L SS++ LG R EAF +
Sbjct: 457 YFIKEKLHLLAYQ---TTLDMH--SKGHRLEEELCSSLIYHLGKIR--APSEAFSVYNML 509
Query: 453 KVQKRNMYHALTE 465
+ KR + L E
Sbjct: 510 RYSKRTICKELHE 522
>gi|12320851|gb|AAG50561.1|AC073506_3 hypothetical protein [Arabidopsis thaliana]
Length = 802
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/299 (18%), Positives = 131/299 (43%), Gaps = 31/299 (10%)
Query: 144 LNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGV 203
++ +VR ++++L +++M+ +G + + YN ++ Y + + E+ ++L DM G
Sbjct: 284 IDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGC 343
Query: 204 PPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY----------- 252
PD SY + + + +++++M + + D TY+T+ +
Sbjct: 344 LPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEAL 403
Query: 253 ----------YIIAGLKEKAIIY-------LKKCEDIVSK---SKDALGYNHLISHYASL 292
+ I L AI++ + + +D++++ D + Y +++ + L
Sbjct: 404 WFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMDCPPDVVTYTAVVNGFCRL 463
Query: 293 GNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVP 352
G D+ K + K Y +L + + G+ EA +M+ E + +
Sbjct: 464 GEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITY 523
Query: 353 NIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
++I+ G ++G + +A V++E+V KG P P +++ +A + M+E L
Sbjct: 524 SVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECL 582
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 116/278 (41%), Gaps = 38/278 (13%)
Query: 135 KVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPD 193
++DKL Y A+++ +EG + E+ L+ EM + Y ++ + G+ +K
Sbjct: 415 RIDKLGYSAIVHALCKEGRMSEAKDLIN---EMDCPPDVVTYTAVVNGFCRLGEVDKAKK 471
Query: 194 VLLDMKENGVPPDNFSYRICINSY---GARSELSSMENVLQEMESQSHISMDWGTYSTVA 250
+L M +G P+ SY +N G E M N+ +E W + +++
Sbjct: 472 LLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEE---------HWWSPNSIT 522
Query: 251 NYYIIAGLKEKAIIYLKKCEDIVSKS------KDALGYNHLISHYASLGNKDEMMKFWGL 304
I+ GL+ + L + D+V + + N L+ G E KF
Sbjct: 523 YSVIMHGLRREG--KLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFM-- 578
Query: 305 QKIKCKKQLNR-------DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL 357
++ LN+ ++ T++ + EL+ A +L++ L D ++
Sbjct: 579 -----EECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVD 633
Query: 358 GYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYA 395
+KG I +A ++K+++ KG PTP ++ + Y
Sbjct: 634 TLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYC 671
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 67/341 (19%), Positives = 137/341 (40%), Gaps = 12/341 (3%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L++ + DE+L ++ +E G L Y+ I+ G+ + D++ +M
Sbjct: 386 YNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMD 445
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
PPD +Y +N + E+ + +LQ M + H + +Y+ + N G
Sbjct: 446 ---CPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGH-KPNTVSYTALLNGMCRTGKS 501
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
+A + E+ S +++ Y+ ++ G E +K +
Sbjct: 502 LEAREMMNMSEEHWW-SPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINL 560
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKG 379
+L SL + G EA K +EE + ++ G+ Q ++ A +VL ++
Sbjct: 561 LLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLIN 620
Query: 380 KTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRD 439
K +++ + K + +A E MK+ L +K P P +++
Sbjct: 621 KHADVFTYTTLVDTLGKKGRIAEATELMKKML-----HKGIDPTPVTYRTVIHRYCQMGK 675
Query: 440 VEEVEAFVSSLKIKVQKRNMYHALTEAHIRSG--QEVDGLL 478
V+++ A + + + + R +Y+ + E G +E D LL
Sbjct: 676 VDDLVAILEKMISRQKCRTIYNQVIEKLCVLGKLEEADTLL 716
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 109/245 (44%), Gaps = 8/245 (3%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +++ REG + E+ ++++M G F + N ++ G+ + + +
Sbjct: 523 YSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECL 582
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G + ++ I+ + EL + +VL +M + + D TY+T+ + G
Sbjct: 583 NKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHA-DVFTYTTLVDTLGKKGRI 641
Query: 260 EKAIIYLKKCEDIVSKSKDA--LGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
+A +KK ++ K D + Y +I Y +G D+++ L+K+ +++ Y
Sbjct: 642 AEATELMKK---MLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAI--LEKMISRQKCRTIY 696
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
++ L +G+LEEA+ +L + + D + ++ GY +KG+ A V +
Sbjct: 697 NQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFN 756
Query: 378 KGKTP 382
+ P
Sbjct: 757 RNLIP 761
>gi|224129154|ref|XP_002320514.1| predicted protein [Populus trichocarpa]
gi|222861287|gb|EEE98829.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/333 (18%), Positives = 147/333 (44%), Gaps = 30/333 (9%)
Query: 100 LAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVD--------------------KL 139
++ ++ H++ L ++ K +SA++ +L +D ++
Sbjct: 72 ISLTLETHSIILHILTKKSKFKSAQSILRTLLASRSIDLPGKLFDTLLFSYRMCDSSPRV 131
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ +L Y + + +MK+ G + + N + + + + +M+
Sbjct: 132 FDSLFKTYAHMNKFRNATDVFSRMKDYGFLPTVESCNAYLSSLLDFHRVDIALTFYREMR 191
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ P+++++ + +++ +L VL+EMES I+ + +Y+T +IAG
Sbjct: 192 RCRISPNSYTFNLVLSALCKSGKLEKAVEVLREMESVG-ITPNVVSYNT-----LIAGHC 245
Query: 260 EKAIIYL-KKCEDIVSKS---KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR 315
K ++ + K ++++ K+ + + +N LI + G E +F+ K+
Sbjct: 246 NKGLLSIATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTV 305
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
Y T++ ++G A K+ EE + D N ++LG ++G +KA ++KE+
Sbjct: 306 TYNTLINGYGQVGNSNMAGKVYEEMMRNGVKADILTYNALILGLCKEGKTKKAAFLVKEL 365
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAFECMK 408
K+ P +++S + +G + N ++AF+ K
Sbjct: 366 DKENLVPNASTYSALISGQCARKNSDRAFQLYK 398
>gi|224089803|ref|XP_002308816.1| predicted protein [Populus trichocarpa]
gi|222854792|gb|EEE92339.1| predicted protein [Populus trichocarpa]
Length = 700
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 83/177 (46%), Gaps = 7/177 (3%)
Query: 59 QWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVR 118
+W L+ S L IR + F L V E M G+ ++ + + LD +G+ +
Sbjct: 276 EWRLDATAFSTL-----IRIYKVAGNFDGCLNVYEEMKALGVKPNLVIYNILLDAMGRAK 330
Query: 119 GLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYN 176
+ ++ + D Y ALL+ Y R +++ + ++MKE G + + YN
Sbjct: 331 RPWQVKKFYQDIIDNGLSPSFVTYAALLHAYGRARYGEDAFKIYREMKEKGLGLNVVLYN 390
Query: 177 GIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
I+ + + G +K ++ DMK +G+ PD++++ I + ++S EN L EM
Sbjct: 391 SILAMCADLGHVDKAVEIFEDMKSSGIKPDSWTFSSMITIFSCCGKVSEAENTLNEM 447
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 101/222 (45%), Gaps = 9/222 (4%)
Query: 137 DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
D +++ Y R G V+++LSL + + A ++ ++ +Y G + +V
Sbjct: 246 DVTLSTMIDSYGRAGNVEKALSLYDRARTGEWRLDATAFSTLIRIYKVAGNFDGCLNVYE 305
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
+MK GV P+ Y I +++ G ++ Q++ + +S + TY+ + + Y A
Sbjct: 306 EMKALGVKPNLVIYNILLDAMGRAKRPWQVKKFYQDI-IDNGLSPSFVTYAALLHAYGRA 364
Query: 257 GLKEKAI-IYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR 315
E A IY + E + + + YN +++ A LG+ D+ ++ + K K +
Sbjct: 365 RYGEDAFKIYREMKEKGLGL--NVVLYNSILAMCADLGHVDKAVEIFEDMKSSGIKPDSW 422
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL 357
+ +M+ G++ EAE L E + + PNI +L
Sbjct: 423 TFSSMITIFSCCGKVSEAENTLNEMFEAGF-----QPNIFIL 459
>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
Length = 864
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/342 (20%), Positives = 150/342 (43%), Gaps = 21/342 (6%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I++L K A + + M G+A + +++ +D + K + ++ AE + +
Sbjct: 231 IIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAG 290
Query: 135 KVDK--LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
Y +L++ Y G+ +ES+ + ++M G + N N + G+ +
Sbjct: 291 TRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAK 350
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSE--LSSMENVLQEMESQSHISMDWGTYSTVA 250
+ M G PD SY ++ Y ++ L+ + N+ M ++ I+ + ++ +
Sbjct: 351 CIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKG-IAPNKHVFNILI 409
Query: 251 NYYIIAGLKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMM-KFWGLQKI 307
N Y G+ +KA++ ED+ +K D + + +IS +G D+ + KF + I
Sbjct: 410 NAYARCGMMDKAMLIF---EDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI 466
Query: 308 KCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNI-----ILLGYSQK 362
Y ++ GEL +A++++ E D P + I+ ++
Sbjct: 467 GVPPS-EAVYGCLIQGCCNHGELVKAKELISEMMNK----DIPPPGVKYFSSIINNLCKE 521
Query: 363 GMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
G + + ++ +V+ G+ P +++ + GY NME+AF
Sbjct: 522 GRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAF 563
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 103/258 (39%), Gaps = 42/258 (16%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
++ L+N Y R G++D+++ + + M+ G + + ++ G+ + M
Sbjct: 404 VFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHM 463
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
+ GVPP Y I EL + ++ EM ++ +S++ N
Sbjct: 464 VDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLC---- 519
Query: 259 KEKAIIYLKKCEDIVSKS---KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR 315
KE + K D++ ++ + + +N L+ Y +GN +E
Sbjct: 520 KEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEA----------------- 562
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
+L ++ IG E +CY Y ++ GY + G I+ A V +++
Sbjct: 563 --FALLDAMASIG-----------IEPNCYIY-----GTLVDGYCKNGRIDDALTVFRDM 604
Query: 376 VKKGKTPTPNSWSIIAAG 393
+ KG PT +SII G
Sbjct: 605 LHKGVKPTSVLYSIILHG 622
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/274 (20%), Positives = 118/274 (43%), Gaps = 10/274 (3%)
Query: 137 DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
D +L+ +V++G VD++ L +M E G L N I+ + +K ++
Sbjct: 190 DDFSYSLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQ 249
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
M ++G+ PD F+Y + I+ + E VL++M ++ + TY+++ + Y I+
Sbjct: 250 KMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQM-VEAGTRPNSITYNSLIHGYSIS 308
Query: 257 GLKEKAIIYLKKCED--IVSKSKDALGYNH-LISHYASLGNKDEMMKFWGLQKIKCKKQL 313
G+ +++ K+ ++ + + H L H G +E + +K K
Sbjct: 309 GMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKH----GRTNEAKCIFDSMVLKGPKPD 364
Query: 314 NRDYITMLGSLVKIGE--LEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAV 371
Y TML + L + + + V NI++ Y++ GM++KA +
Sbjct: 365 IISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLI 424
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
+++ KG P +++ + + ++ A
Sbjct: 425 FEDMQNKGMIPDTVTFATVISSLCRIGRLDDALH 458
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 115/266 (43%), Gaps = 4/266 (1%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ +L+ Y G ++E+ +L+ M +G + Y ++ Y G+ + V DM
Sbjct: 546 FNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDML 605
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEM-ESQSHISMDWGTYSTVANYYIIAGL 258
GV P + Y I ++ ++ + + EM ES + +S+ TY V
Sbjct: 606 HKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIH--TYGVVLGGLCRNNC 663
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
++A + L+K + K D + +N +IS +G + E + + + Y
Sbjct: 664 TDEANMLLEKLFAMNVKF-DIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYS 722
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
M+ +L+K EEA+ + E S + D R+ N I+ K + KA L I +
Sbjct: 723 MMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGEN 782
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAF 404
T ++ S++A+ ++ + ++ F
Sbjct: 783 NLTLEASTISLLASLFSREGMIKGLF 808
>gi|42572723|ref|NP_974457.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332646343|gb|AEE79864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 150/366 (40%), Gaps = 20/366 (5%)
Query: 52 SLTPVLDQWVLEGQK--ISELELQRVIRQLRSRKRFKHALQVSEWMSGQGL-AFSVHDHA 108
S PVL Q+ +G + +L L ++R + K++ ++ EW+ Q FS D
Sbjct: 92 SAVPVLRQYKTDGDQGLPRDLVLGTLVR-FKQLKKWNLVSEILEWLRYQNWWNFSEIDFL 150
Query: 109 VQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEM 166
+ + GK+ AE + L+ + Y AL+ Y R G + + ++ ++M+
Sbjct: 151 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS 210
Query: 167 GSFGSALNYNGIMCLYTNTGQH---EKIPDVLLDMKENGVPPDNFSYRICINSYGARSEL 223
G SA+ Y I+ + + E++ + LLD K++ + PD Y + I Y
Sbjct: 211 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 270
Query: 224 SSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS---KDAL 280
V M + + TY+++ ++ KE + IY D + +S D +
Sbjct: 271 EKARKVFSSMVGKG-VPQSTVTYNSLMSFE--TSYKEVSKIY-----DQMQRSDIQPDVV 322
Query: 281 GYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEW 340
Y LI Y ++E + + + ++ Y +L + G +E+A+ + +
Sbjct: 323 SYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM 382
Query: 341 ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNM 400
D +L Y +E A+ K I G P ++ + GYA N++
Sbjct: 383 RRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDV 442
Query: 401 EKAFEC 406
EK E
Sbjct: 443 EKMMEV 448
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 31/151 (20%), Positives = 64/151 (42%), Gaps = 2/151 (1%)
Query: 85 FKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED--KVDKLYGA 142
+K ++ + M + V +A+ + G+ R E A + F + D K Y
Sbjct: 302 YKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNI 361
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
LL+ + G+V+++ ++ + M+ F +Y ++ Y N E +K +G
Sbjct: 362 LLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDG 421
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEM 233
P+ +Y I Y +++ M V ++M
Sbjct: 422 FEPNIVTYGTLIKGYAKANDVEKMMEVYEKM 452
>gi|356513567|ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 857
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 95/480 (19%), Positives = 193/480 (40%), Gaps = 60/480 (12%)
Query: 38 NLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSG 97
L +R++ L P S+ LD + K+S + V ++ R ++ +L++ ++M
Sbjct: 71 TLINRLTAL-PPRGSIARCLDPF---KNKLSLNDFALVFKEFAQRGDWQRSLRLFKYMQR 126
Query: 98 Q-GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYG--ALLNCYVREGLVD 154
Q + H H + + L+G+ L+ F+ + V +Y A++N Y R G
Sbjct: 127 QIWCKPNEHIHTIMITLLGREGLLDKCREVFDEMPSNGVVRTVYSYTAIINAYGRNGQFH 186
Query: 155 ESLSLMQKMKEMGSFGSALNYN--------------GIMCLYTNTGQHEKI-PDVLL--- 196
SL L+ MK+ S L YN G++ L+ +HE I PDV+
Sbjct: 187 ASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEM-RHEGIQPDVITYNT 245
Query: 197 -------------------DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS 237
M E+G+ PD +Y + ++G + L + +L+EME
Sbjct: 246 LLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMECGG 305
Query: 238 HISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDE 297
++ D +Y+ + Y G ++A+ ++ + +A Y+ L++ Y G D+
Sbjct: 306 NLP-DITSYNVLLEAYAELGSIKEAMGVFRQMQ-AAGCVANAATYSVLLNLYGKHGRYDD 363
Query: 298 MMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL 357
+ + K+ Y ++ + G +E + + + + ++
Sbjct: 364 VRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIF 423
Query: 358 GYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA---FECMKEALAVH 414
+ G+ E A +L + +KG P+ +++ + + E+A F M E +
Sbjct: 424 ACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVGS-- 481
Query: 415 EENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNM--YHALTEAHIRSGQ 472
P +S++ +E EA +S + KR++ ++ + EA + GQ
Sbjct: 482 ------NPTVETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIEAFRQGGQ 535
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/354 (19%), Positives = 138/354 (38%), Gaps = 39/354 (11%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLN 145
A V M+ G+ ++ ++ + GK+ LE + + + Y LL
Sbjct: 259 AEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMECGGNLPDITSYNVLLE 318
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
Y G + E++ + ++M+ G +A Y+ ++ LY G+++ + D+ L+MK + P
Sbjct: 319 AYAELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVSNTDP 378
Query: 206 DNFSYRICINSYGARSELSSM---------ENVLQEMESQSHISMDWG------------ 244
D +Y I I +G + ENV M++ + G
Sbjct: 379 DAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIFACGKGGLYEDAKKIL 438
Query: 245 -------------TYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYAS 291
Y+ V + A L E+A++ + V + YN LI +A
Sbjct: 439 LHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNE-VGSNPTVETYNSLIHAFAR 497
Query: 292 LGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWE-LSCYCYDFR 350
G E K+ + ++ + + G+ EEA K E E +C +
Sbjct: 498 GGLYKEAEAILSRMNESGLKRDVHSFNGVIEAFRQGGQYEEAVKSYVEMEKANCEPNELT 557
Query: 351 VPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
+ ++ + Y G++++ + +EI G P+ + ++ A YA + + A+
Sbjct: 558 LEAVLSI-YCSAGLVDEGEEQFQEIKASGILPSVMCYCMMLALYAKNDRLNDAY 610
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 104/482 (21%), Positives = 187/482 (38%), Gaps = 96/482 (19%)
Query: 68 SELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLD-------------LI 114
S ++ R + K+F L + + G+A +++ + ++ ++
Sbjct: 87 SLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVL 146
Query: 115 GKVR--GLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSA 172
GKV G E T FN+L + G L EG V E++ L+ +M E G
Sbjct: 147 GKVMKLGYEPDTTTFNTL--------IKGLFL-----EGKVSEAVVLVDRMVENGCQPDV 193
Query: 173 LNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQE 232
+ YN I+ +G D+L M+E V D F+Y I+S + + ++ +E
Sbjct: 194 VTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKE 253
Query: 233 MESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYA 290
ME++ I TY+++ AG + LK D+VS+ + + +N L+ +
Sbjct: 254 METKG-IKSSVVTYNSLVRGLCKAGKWNDGALLLK---DMVSREIVPNVITFNVLLDVFV 309
Query: 291 SLGNKDEMMKFWGLQKIKCKKQLNR-------DYITMLGSLVKIGELEEAEKMLE----- 338
G E + + K+ + R Y T++ L EA ML+
Sbjct: 310 KEGKLQEANELY-------KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN 362
Query: 339 ---------EWELSCYCYDFRVPN---------------------IILLGYSQKGMIEKA 368
+ YC RV + I++ G+ Q G I+ A
Sbjct: 363 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 422
Query: 369 DAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLV- 427
+ + +E+V G P ++ I+ G D +EKA E + E+ + + +V
Sbjct: 423 EELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALE-------IFEDLQKSKMDLGIVM 475
Query: 428 -SSILDWLGDNRDVEEVEAFVSSLKIKVQKRNM--YHALTEAHIRSG--QEVDGLLESMK 482
++I++ + VE+ SL K K N+ Y + + G E + LL M+
Sbjct: 476 YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 535
Query: 483 AD 484
D
Sbjct: 536 ED 537
>gi|8778411|gb|AAF79419.1|AC025808_1 F18O14.1 [Arabidopsis thaliana]
Length = 689
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 154/371 (41%), Gaps = 54/371 (14%)
Query: 90 QVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV--DKLYGALLNCY 147
+V MS +G++ +V + + K +E AE F L ++ V +YG L++ Y
Sbjct: 67 RVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGY 126
Query: 148 VREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDN 207
R G + +++ + M E+G + N ++ Y +GQ + + M + + PD+
Sbjct: 127 CRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDH 186
Query: 208 FSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLK 267
TY+T+ + Y AG ++A LK
Sbjct: 187 H------------------------------------TYNTLVDGYCRAGYVDEA---LK 207
Query: 268 KCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI---TMLG 322
C+ + K + YN L+ Y+ +G +++ W K+ K+ +N D I T+L
Sbjct: 208 LCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLW---KMMLKRGVNADEISCSTLLE 264
Query: 323 SLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTP 382
+L K+G+ EA K+ E D N+++ G + + +A +L + P
Sbjct: 265 ALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKP 324
Query: 383 TPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEE 442
++ ++ GY N+++AF A+ + E K P + ++++ R + +
Sbjct: 325 AVQTYQALSHGYYKVGNLKEAF-----AVKEYMERKGIFPTIEMYNTLISGAFKYRHLNK 379
Query: 443 VEAFVSSLKIK 453
V V L+ +
Sbjct: 380 VADLVIELRAR 390
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 75/165 (45%)
Query: 239 ISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEM 298
+S D T S V N Y +G +KA+++ K+ E + + + YN LI+ YA +G+ + M
Sbjct: 6 VSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGM 65
Query: 299 MKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLG 358
+ L + + Y +++ K G +EEAE + E + D + +++ G
Sbjct: 66 TRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDG 125
Query: 359 YSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
Y + G I A V +++ G + + GY + +A
Sbjct: 126 YCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEA 170
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 106/245 (43%), Gaps = 17/245 (6%)
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALN---YNGIMCLYTNTGQHEKIPDVLLDMK 199
++N Y R G VD+++ ++ + S G LN YN ++ Y G E + VL M
Sbjct: 16 VVNAYCRSGNVDKAMVFAKETES--SLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMS 73
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
E GV + +Y I Y + + E+V + ++ + ++ D Y + + Y G
Sbjct: 74 ERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVA-DQHMYGVLMDGYCRTGQI 132
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT 319
A+ +I ++ + N LI+ Y G E + + K + Y T
Sbjct: 133 RDAVRVHDNMIEIGVRTNTTI-CNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNT 191
Query: 320 MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVP-----NIILLGYSQKGMIEKADAVLKE 374
++ + G ++EA K+ ++ C VP NI+L GYS+ G ++ K
Sbjct: 192 LVDGYCRAGYVDEALKLCDQM-----CQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKM 246
Query: 375 IVKKG 379
++K+G
Sbjct: 247 MLKRG 251
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 96/231 (41%), Gaps = 42/231 (18%)
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKA 262
V PD F+ I +N+Y + +E ES + ++ TY+++ N Y + G E
Sbjct: 6 VSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGM 65
Query: 263 IIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIK-------------- 308
L+ + S++ + Y LI Y G +E + L K K
Sbjct: 66 TRVLRLMSE-RGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMD 124
Query: 309 --CKKQLNRDYI---------------TMLGSLV----KIGELEEAEKM---LEEWELSC 344
C+ RD + T+ SL+ K G+L EAE++ + +W L
Sbjct: 125 GYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLK- 183
Query: 345 YCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYA 395
D N ++ GY + G +++A + ++ +K PT +++I+ GY+
Sbjct: 184 --PDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYS 232
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 115/278 (41%), Gaps = 12/278 (4%)
Query: 120 LESAETYFNSLND-EDKVDK-LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNG 177
L AE F+ +ND K D Y L++ Y R G VDE+L L +M + + + YN
Sbjct: 167 LVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNI 226
Query: 178 IMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS 237
++ Y+ G + + M + GV D S + + + + + + + ++
Sbjct: 227 LLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARG 286
Query: 238 HISMDWGTYSTVANYYIIAGL-KEKAIIYLKKCEDIVS--KSKDALGYNHLISH-YASLG 293
++ T+ +I+GL K + + K+ D V+ + K A+ +SH Y +G
Sbjct: 287 LLT------DTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVG 340
Query: 294 NKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPN 353
N E + K Y T++ K L + ++ E
Sbjct: 341 NLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYG 400
Query: 354 IILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIA 391
++ G+ GMI+KA A E+++KG T N S IA
Sbjct: 401 ALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIA 438
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 94/226 (41%), Gaps = 39/226 (17%)
Query: 128 NSLNDEDKVDKLYGALLNCYVREGLVDESLSL--MQKMKEMGSFGSALNYNGIMCLYTNT 185
NSL DK+D+ C + + +VD L L Q +KE L + CL T
Sbjct: 439 NSLFRLDKIDE------ACLLLQKIVDFDLLLPGYQSLKEF------LEASATTCLKT-- 484
Query: 186 GQHEKIPDVLLDMKENGVP-----PDNFSYRICINSYGARSELSSMENVLQEMESQSHIS 240
+KI + + EN P P+N Y + I +L + ++ S
Sbjct: 485 ---QKIAESV----ENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFI 537
Query: 241 MDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMK 300
D TY+ + + IAG KA L+ + + + YN LI LGN D +
Sbjct: 538 PDEYTYTILIHGCAIAGDINKAFT-LRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQR 596
Query: 301 FWGLQKIKCKKQLNRD---YITMLGSLVKIGELEEA----EKMLEE 339
L K+ +K + + Y T++ LVK G + EA EKM+E+
Sbjct: 597 L--LHKLP-QKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEK 639
>gi|30694913|ref|NP_191463.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525907|sp|Q9LYT2.2|PP287_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g59040
gi|332646344|gb|AEE79865.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 583
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 150/366 (40%), Gaps = 20/366 (5%)
Query: 52 SLTPVLDQWVLEGQK--ISELELQRVIRQLRSRKRFKHALQVSEWMSGQGL-AFSVHDHA 108
S PVL Q+ +G + +L L ++R + K++ ++ EW+ Q FS D
Sbjct: 85 SAVPVLRQYKTDGDQGLPRDLVLGTLVR-FKQLKKWNLVSEILEWLRYQNWWNFSEIDFL 143
Query: 109 VQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YGALLNCYVREGLVDESLSLMQKMKEM 166
+ + GK+ AE + L+ + Y AL+ Y R G + + ++ ++M+
Sbjct: 144 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS 203
Query: 167 GSFGSALNYNGIMCLYTNTGQH---EKIPDVLLDMKENGVPPDNFSYRICINSYGARSEL 223
G SA+ Y I+ + + E++ + LLD K++ + PD Y + I Y
Sbjct: 204 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 263
Query: 224 SSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKS---KDAL 280
V M + + TY+++ ++ KE + IY D + +S D +
Sbjct: 264 EKARKVFSSMVGKG-VPQSTVTYNSLMSFE--TSYKEVSKIY-----DQMQRSDIQPDVV 315
Query: 281 GYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEW 340
Y LI Y ++E + + + ++ Y +L + G +E+A+ + +
Sbjct: 316 SYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM 375
Query: 341 ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNM 400
D +L Y +E A+ K I G P ++ + GYA N++
Sbjct: 376 RRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDV 435
Query: 401 EKAFEC 406
EK E
Sbjct: 436 EKMMEV 441
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 31/151 (20%), Positives = 64/151 (42%), Gaps = 2/151 (1%)
Query: 85 FKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED--KVDKLYGA 142
+K ++ + M + V +A+ + G+ R E A + F + D K Y
Sbjct: 295 YKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNI 354
Query: 143 LLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENG 202
LL+ + G+V+++ ++ + M+ F +Y ++ Y N E +K +G
Sbjct: 355 LLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDG 414
Query: 203 VPPDNFSYRICINSYGARSELSSMENVLQEM 233
P+ +Y I Y +++ M V ++M
Sbjct: 415 FEPNIVTYGTLIKGYAKANDVEKMMEVYEKM 445
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 68/150 (45%), Gaps = 9/150 (6%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+ Y R +E+LS+ ++M + G + YN ++ + +G E+ V M+
Sbjct: 317 YALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMR 376
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+ + PD +SY +++Y S++ E + ++ + TY T+ Y A
Sbjct: 377 RDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDG-FEPNIVTYGTLIKGYAKANDV 435
Query: 260 EKAI-IY-------LKKCEDIVSKSKDALG 281
EK + +Y +K + I++ DA G
Sbjct: 436 EKMMEVYEKMRLSGIKANQTILTTIMDASG 465
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 132/294 (44%), Gaps = 16/294 (5%)
Query: 114 IGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
+G +R + SA + + YG L+ VD+++ LM +M E G + +
Sbjct: 135 VGLLRSMRSAGVRADVVT--------YGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVV 186
Query: 174 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 233
Y+ ++ Y +G+ E + V ++M E G+ PD Y I+S + V+ +M
Sbjct: 187 VYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVM-DM 245
Query: 234 ESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLG 293
+ + + TY+ + N G ++AI LKK + + D + YN LI + +
Sbjct: 246 MVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSE-KGVAPDVVTYNTLIKGLSDVL 304
Query: 294 NKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVK----IGELEEAEKMLEEWELSCYCYDF 349
DE M W L+++ K + + + S+++ IG + +A ++ E + +
Sbjct: 305 EMDEAM--WLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNL 362
Query: 350 RVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
N+++ G + + KA ++ E+ G P ++SI+ G+ +++A
Sbjct: 363 VTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRA 416
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 123/277 (44%), Gaps = 9/277 (3%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM- 198
Y L+NC +EG V E++ +++KM E G + YN ++ ++ + ++ +L +M
Sbjct: 258 YNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMV 317
Query: 199 -KENGVPPDNFSYRICINSYGARSELSSMENVLQ--EMESQSHISMDWGTYSTVANYYII 255
+N V P+ ++ I ++ M Q M ++ ++ TY+ + +
Sbjct: 318 RGKNIVKPNVVTFNSVIQGL---CDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLR 374
Query: 256 AGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR 315
KA+ + + + D+ Y+ LI + + D + + +
Sbjct: 375 VHKVRKAMELMDEMTSL-GLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELF 433
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
YI +L ++ + G +E A + E + + + D + ++ G + G ++ A +LK I
Sbjct: 434 HYIPLLVAMCEQGMMERARNLFNEMD-NNFPLDVVAYSTMIHGACKAGDLKTAKELLKSI 492
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
V +G TP ++SI+ +A +ME A +K+ A
Sbjct: 493 VDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTA 529
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 68/331 (20%), Positives = 140/331 (42%), Gaps = 15/331 (4%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
V+D V G + + + +I + K A+ V + MS +G+A V + + +
Sbjct: 242 VMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLS 301
Query: 116 KVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVD-----ESLSLMQKMKEMGSFG 170
V ++ A + + K N + +GL D ++ + M+E G
Sbjct: 302 DVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVI-QGLCDIGRMRQAFQVRAMMEETGCMV 360
Query: 171 SALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVL 230
+ + YN ++ + K +++ +M G+ PD+F+Y I I + ++ E++L
Sbjct: 361 NLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLL 420
Query: 231 QEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYA 290
M + I + Y + G+ E+A + ++ + D + Y+ +I
Sbjct: 421 STMRDRG-IEPELFHYIPLLVAMCEQGMMERARNLFNEMDN--NFPLDVVAYSTMIHGAC 477
Query: 291 SLGNKDEMMKFWGLQKIKCKKQLNRDYIT---MLGSLVKIGELEEAEKMLEEWELSCYCY 347
G+ + L K + L D +T ++ K G++E A +L++ S +
Sbjct: 478 KAGDLKTAKE---LLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLP 534
Query: 348 DFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
D V + ++ GYS KG I K +++E++ K
Sbjct: 535 DVAVFDSLIQGYSTKGEINKVLELIREMITK 565
>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 717
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 125/276 (45%), Gaps = 8/276 (2%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +L+ Y +EG VD++L L+ +M+E G + + + YN ++ + G+ E+ ++ +M
Sbjct: 218 YNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEML 277
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+G+ ++Y IN + + ++++EM ++ TY+T+ Y +
Sbjct: 278 NSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFP-TLSTYNTLM--YGLCKWV 334
Query: 260 EKAIIYLKKCEDIVSK-SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR--D 316
+ + L+ + + SK + D + +N L+ Y G E F ++KC+ +
Sbjct: 335 QVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISE--AFLLFDELKCRDLVPTVIT 392
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y T++ L G L+ A ++ +E D I++ G + G + A E++
Sbjct: 393 YNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEML 452
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
KG P +++ G + AF +E LA
Sbjct: 453 SKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLA 488
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 110/256 (42%), Gaps = 8/256 (3%)
Query: 88 ALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNS-LNDEDKVDKL-YGALLN 145
AL++ + M+ QGL + + + ++ K+ + A +FN L+ K D+ Y +
Sbjct: 409 ALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIV 468
Query: 146 CYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPP 205
++ + S+ ++M G + YN + G E+ D+L +M +G+ P
Sbjct: 469 GEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIP 528
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
D+ +Y IN + L V EM S+ ++ TY+ + + + + + A +Y
Sbjct: 529 DHVTYTSIINGFVKNGHLRKAREVFNEMLSKG-VAPSVVTYTVLIHAHAAKQMLDLAFMY 587
Query: 266 LKKCEDIVSKSKDA--LGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGS 323
K ++ KS A + YN +I+ DE K++ + K Y ++
Sbjct: 588 FSK---MLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINE 644
Query: 324 LVKIGELEEAEKMLEE 339
+G EEA ++ E
Sbjct: 645 SCNMGYWEEALRLYRE 660
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 85/429 (19%), Positives = 154/429 (35%), Gaps = 51/429 (11%)
Query: 27 AYRAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFK 86
AY ++ V ++ + L V V D+ + G R++R LR
Sbjct: 138 AYWVMERVVSFEMHGVVDVLIAGHVXCLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLS 197
Query: 87 HALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKV--DKLYGALL 144
A V M G+ +V + LD K ++ A + + + D Y L+
Sbjct: 198 KAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLV 257
Query: 145 NCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVP 204
N ++G ++++ L+++M G SA YN ++ + G + D++ +M
Sbjct: 258 NGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAF 317
Query: 205 P-----DNFSYRIC--INSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
P + Y +C + G R S M +S + D +++++ Y G
Sbjct: 318 PTLSTYNTLMYGLCKWVQVTGVRLRFSDM--------LKSKFTPDIVSFNSLLYGYCRTG 369
Query: 258 LKEKAIIYLK--KCEDIVSKS--------------------------------KDALGYN 283
+A + KC D+V D Y
Sbjct: 370 CISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYT 429
Query: 284 HLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELS 343
L++ LG F+ K K Y T + +KI + A M EE +
Sbjct: 430 ILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAA 489
Query: 344 CYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
+ D N+ + Q+G E+A +L+ +V G P +++ I G+ ++ KA
Sbjct: 490 GFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKA 549
Query: 404 FECMKEALA 412
E E L+
Sbjct: 550 REVFNEMLS 558
>gi|356525958|ref|XP_003531588.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like [Glycine max]
Length = 630
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 91/450 (20%), Positives = 181/450 (40%), Gaps = 67/450 (14%)
Query: 64 GQKISELELQRVIRQLRSRKRFKHALQVSEWMS-GQGLAFSVHDHAVQLDLIGKVRGLES 122
G ++ +L + + +F H Q+ WM L + H ++ + +
Sbjct: 65 GDALTVKDLNAALYHFKKSNKFNHISQLFSWMQENNKLDALSYSHYIRFMASHNLDAAKM 124
Query: 123 AETYFNSLNDEDKVDKLY-GALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM-- 179
+ Y + N K++ L ++L+C +++ + +L+L Q+MK G + Y ++
Sbjct: 125 LQLYHSIQNQSAKINVLVCNSVLSCLIKKAKFNSALNLFQQMKLDGLLPDLVTYTTLLAG 184
Query: 180 CLYTNTG-----------QHEKIP-DVLL----------------------DMKENGVPP 205
C+ G QH K+ D ++ MK+ G P
Sbjct: 185 CIKIENGYAKALELIQELQHNKLQMDGVIYGTIMAVCASNTKWEEAEYYFNQMKDEGHTP 244
Query: 206 DNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIY 265
+ + Y IN+Y A + ++Q+M+S+ + + +T+ Y+ GL EK+
Sbjct: 245 NVYHYSSLINAYSACGNYKKADMLIQDMKSEGLVP-NKVILTTLLKVYVKGGLFEKSREL 303
Query: 266 LKKCEDIVSKSKDALGYNHLISHYASLGNK-------DEMMKFWGLQKIKCKKQLNRD-- 316
L + + + ++D + Y + A G DEMM K + D
Sbjct: 304 LAELKSL-GYAEDEMPYCIFMDGLAKAGQIHEAKLIFDEMM----------KNHVRSDGY 352
Query: 317 -YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
+ M+ + + EA+++ +++E + YD + N +L + + G +E+ LK++
Sbjct: 353 AHSIMISAFCRAKLFREAKQLAKDFETTSNKYDLVILNSMLCAFCRVGEMERVMETLKKM 412
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLG 435
+ P N++ I+ + + A+ MK+ +K +P L SS++ LG
Sbjct: 413 DELAINPGYNTFHILIKYFCREKMYLLAYRTMKDM-----HSKGHQPVEELCSSLISHLG 467
Query: 436 DNRDVEEVEAFVSSLKIKVQKRNMYHALTE 465
EAF +K KR M +L E
Sbjct: 468 QVNAYS--EAFSVYNMLKYSKRTMCKSLHE 495
>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 819
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/287 (18%), Positives = 124/287 (43%), Gaps = 44/287 (15%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+ + G ++E+ L +KM + G YN +M + G+ + + VL + K
Sbjct: 525 YNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAK 584
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG-- 257
++GV P+ ++Y + + Y + + ++ ++ + + + + Y+ + + AG
Sbjct: 585 DHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKL-VYNKVELSYVVYNILIAAHSKAGNF 643
Query: 258 -------------------LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEM 298
+II+ C D+V ++K G +EM
Sbjct: 644 TEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAK---------------GIFEEM 688
Query: 299 MKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLG 358
+ + C Y ++G K+G++++ E +L+E +C + I++ G
Sbjct: 689 RNEGLMPNVFC-------YTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDG 741
Query: 359 YSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
Y + G ++A +L E++ G +P +++++ GY +N +E+ +
Sbjct: 742 YCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYCKENELEETLQ 788
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 10/215 (4%)
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
D + GV P S ++S +EL V M + + +D TY+T N
Sbjct: 192 DTFMLFTSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAM-CRGGVLIDVYTYATAINA 250
Query: 253 YIIAGLKEKAI-IYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKK 311
Y G ++A+ ++LK E V + + YN+LI G +E + F G +
Sbjct: 251 YCKGGKIDEAVGLFLKMGEGGVLP--NVVTYNNLIDGLCKSGRLEEALMFKGRM---VEN 305
Query: 312 QLNRDYIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKA 368
++N +T ++ LVK + +EA +L E + + V N ++ GYS+KG ++ A
Sbjct: 306 KVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDA 365
Query: 369 DAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
V ++ KG P + + + G+ N ME+A
Sbjct: 366 LRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQA 400
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 92/445 (20%), Positives = 185/445 (41%), Gaps = 57/445 (12%)
Query: 44 SPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSRKRFKH-----ALQVSEWMSGQ 98
+PL D L+ + ++ G++ S EL +I L S+ F+H A + +
Sbjct: 144 TPLKKTDARLSEIASAFLELGER-SHGELDLLIYILCSQ--FQHLGFHWAFDTFMLFTSK 200
Query: 99 GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLY--GALLNCYVREGLVDES 156
G+ S+ + + K L + F+++ + +Y +N Y + G +DE+
Sbjct: 201 GVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEA 260
Query: 157 LSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINS 216
+ L KM E G + + YN ++ +G+ E+ M EN V P +Y I +N
Sbjct: 261 VGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNG 320
Query: 217 YGARSELSSMENVLQEMESQSHISMDWGTYSTVANY---------------YIIAGLKEK 261
+ +VL EM S+ ++ + + Y + GLK
Sbjct: 321 LVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPN 380
Query: 262 AIIY------------LKKCE--------DIVSKSKDALGYN-HLISHYASLGNKDEMMK 300
A+ + +++ E +++S ++DA Y HL+ + + +++K
Sbjct: 381 AVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVK 440
Query: 301 FWGLQKIKCKKQLNRDYITML-GSLVKIGE-LEEAEKMLEEWELSCYCYDFRVPNIILLG 358
L+ IK +N +T+L L K G+ LE + + + N +L G
Sbjct: 441 ALLLRNIK----VNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYG 496
Query: 359 YSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENK 418
++G +E+ V KE+V++G S++ + G +E+AF+ +KE + +
Sbjct: 497 LCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFK-LKEKMM----KQ 551
Query: 419 FWRPKPSLVSSILDWLGDNRDVEEV 443
++P + ++ L D +++V
Sbjct: 552 GFKPDTYTYNFLMKGLADKGKMDDV 576
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 121/277 (43%), Gaps = 14/277 (5%)
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
ALL G ++E + ++M E G ++YN ++ +G+ E+ + M +
Sbjct: 492 ALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQ 551
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
G PD ++Y + + ++ + VL E + + + TY+ + Y A +
Sbjct: 552 GFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIY-TYALMLEGYCNADRIDN 610
Query: 262 AIIYLKKCEDIVSKSK-DALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITM 320
A+ K + +K + + YN LI+ ++ GN E K + Y ++
Sbjct: 611 AVSLFNKL--VYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSI 668
Query: 321 LGSLVKIGELEEAEKMLEEWE-----LSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
+ + +EEA+ + EE + +CY ++ GY + G +++ +++L+E+
Sbjct: 669 IHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCY-----TALIGGYCKLGQMDQIESILQEM 723
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
P +++I+ GY N ++A + + E +A
Sbjct: 724 TSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIA 760
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 124/284 (43%), Gaps = 10/284 (3%)
Query: 133 EDKVDK---LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHE 189
E+KV+ YG L+N V+ DE+ S++ +M G + +N ++ Y+ G +
Sbjct: 304 ENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMD 363
Query: 190 KIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTV 249
V DM G+ P+ ++ + + +++ E VL+ + S +S++ S V
Sbjct: 364 DALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNV-LSVNEDACSYV 422
Query: 250 ANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
+ + + A+ +K K D+L L+ G E + W ++
Sbjct: 423 LHLLCKSSKFDSALKIVKALLLRNIKVNDSL-LTLLVCGLCKCGKHLEAIDLW--FRLAD 479
Query: 310 KKQLNRDYIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIE 366
KK L + T +L L + G +EE + +E D N ++ G + G IE
Sbjct: 480 KKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIE 539
Query: 367 KADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEA 410
+A + ++++K+G P +++ + G ADK M+ + EA
Sbjct: 540 EAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEA 583
>gi|110740599|dbj|BAE98404.1| hypothetical protein [Arabidopsis thaliana]
Length = 546
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 132/302 (43%), Gaps = 16/302 (5%)
Query: 84 RFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKL--YG 141
+F AL V M A + + +D+ G++ ++ A+ F SL D + Y
Sbjct: 178 KFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYN 237
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
+L Y L E++ L + M+ + + YN ++ +Y T +HEK +++ +M+
Sbjct: 238 TILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSR 297
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
G+ P+ +Y I+ +G +L + Q++ S S + +D Y T+ Y GL
Sbjct: 298 GIEPNAITYSTIISIWGKAGKLDRAATLFQKLRS-SGVEIDQVLYQTMIVAYERVGLMGH 356
Query: 262 AIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITML 321
A L + K D + I+ A G +E W ++ ++ I++
Sbjct: 357 AKRLLHEL-----KLPDNIPRETAITILAKAGRTEEAT--WVFRQAFESGEVKD--ISVF 407
Query: 322 GSLVKIGELEE----AEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
G ++ + + ++ E+ + Y D V ++L Y ++ EKAD V +E+ +
Sbjct: 408 GCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQE 467
Query: 378 KG 379
+G
Sbjct: 468 EG 469
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 124/268 (46%), Gaps = 10/268 (3%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+ + +EG+ D +LS +QKM++ G + Y+ ++ L + K + +K
Sbjct: 61 YSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLK 120
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+G+ PD +Y IN YG +++EM +++ + + +YST+ + Y+
Sbjct: 121 RSGITPDLVAYNSMINVYGKAKLFREARLLIKEM-NEAGVLPNTVSYSTLLSVYVENHKF 179
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMK-FWGLQKIKCKKQLNRDYI 318
+A+ + ++ V+ + D N +I Y L E + FW L+K+ + + Y
Sbjct: 180 LEALSVFAEMKE-VNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNV-VSYN 237
Query: 319 TML---GSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
T+L G GE ++++ ++ + N ++ Y + EKA +++E+
Sbjct: 238 TILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY---NTMIKIYGKTMEHEKATNLVQEM 294
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKA 403
+G P ++S I + + +++A
Sbjct: 295 QSRGIEPNAITYSTIISIWGKAGKLDRA 322
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 65/327 (19%), Positives = 142/327 (43%), Gaps = 12/327 (3%)
Query: 60 WVLEGQKI--SELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKV 117
WV E K S V+R + K+F A + + M + LA + ++ + GK
Sbjct: 12 WVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKE 71
Query: 118 RGLESAETYFNSLNDEDKVDK---LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALN 174
+SA ++ + ++D+V LY L+ R +++S+ ++K G +
Sbjct: 72 GMFDSALSWLQKM-EQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVA 130
Query: 175 YNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEME 234
YN ++ +Y + ++ +M E GV P+ SY ++ Y + +V EM+
Sbjct: 131 YNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMK 190
Query: 235 SQSHISMDWGTYSTVANYYIIAGLKEKA--IIYLKKCEDIVSKSKDALGYNHLISHYASL 292
+ + ++D T + + + Y + ++A + + + DI + + YN ++ Y
Sbjct: 191 -EVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDI---EPNVVSYNTILRVYGEA 246
Query: 293 GNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVP 352
E + + L + K +Q Y TM+ K E E+A +++E + +
Sbjct: 247 ELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITY 306
Query: 353 NIILLGYSQKGMIEKADAVLKEIVKKG 379
+ I+ + + G +++A + +++ G
Sbjct: 307 STIISIWGKAGKLDRAATLFQKLRSSG 333
>gi|356547408|ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Glycine max]
Length = 631
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 130/294 (44%), Gaps = 25/294 (8%)
Query: 152 LVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM-KENGVPPDNFSY 210
+V+ +LS+ ++K +A YN I+ + G HEK+ ++ +M E PD +Y
Sbjct: 168 MVNRALSVFYQVKGRKCRPTASTYNSIILMLMQEGHHEKVHELYNEMCSEVHCFPDTVTY 227
Query: 211 RICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLK--- 267
I+++ + S + EM+ ++ + Y+T+ Y G E+A+ +K
Sbjct: 228 SALISAFAKLNRDDSAIRLFDEMK-ENGLQPTAKIYTTLMGIYFKVGKVEEALGLVKEMR 286
Query: 268 --KCEDIVSKSKDALGYNHLISHYASLGN-KDEMMKFWGLQKIKCKKQ--LNRDYITMLG 322
+C V Y LI G +D M + + K CK L + I +LG
Sbjct: 287 ARRCLLTV------FTYTELIRGLGKSGRVEDAYMTYKNMLKDGCKPDVVLMNNLINILG 340
Query: 323 SLVKIGELEEAEKMLEEWEL-SCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKT 381
+ L +A K+ +E +L +C II + K + +A + + + K G
Sbjct: 341 ---RSNHLRDAIKLFDEMKLLNCAPNVVTYNTIIKSLFEAKAPLSEASSWFERMKKDGIV 397
Query: 382 PTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLG 435
P+ ++SI+ GY N +EKA ++E + K + P P+ S+++ LG
Sbjct: 398 PSSFTYSILIDGYCKTNRVEKALLLLEEM-----DEKGFPPCPAAYCSLINTLG 446
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 158/374 (42%), Gaps = 26/374 (6%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+++++R+R+ +E + G G + V D + TY N L D
Sbjct: 281 LVKEMRARRCLLTVFTYTELIRGLGKSGRVEDAYM---------------TYKNMLKDGC 325
Query: 135 KVDK-LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIM-CLYTNTGQHEKIP 192
K D L L+N R + +++ L +MK + + + YN I+ L+ +
Sbjct: 326 KPDVVLMNNLINILGRSNHLRDAIKLFDEMKLLNCAPNVVTYNTIIKSLFEAKAPLSEAS 385
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
MK++G+ P +F+Y I I+ Y + + +L+EM+ + Y ++ N
Sbjct: 386 SWFERMKKDGIVPSSFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCP-AAYCSLINT 444
Query: 253 YIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWG-LQKIKCKK 311
+A + A ++ ++ S A Y +I H+ G +E + + ++K+ C
Sbjct: 445 LGVAKRYDVANELFQELKENCGCS-SARVYAVMIKHFGKCGRLNEAINLFNEMKKLGCTP 503
Query: 312 QLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAV 371
+ Y ++ +V+ ++EA + E + D NIIL G ++ G + A +
Sbjct: 504 DV-YAYNALMTGMVRAERMDEAFSLFRTMEENGCTPDINSHNIILNGLARTGGPKGALEM 562
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSIL 431
++ P S++ I + E+A + M+E +K ++ SSIL
Sbjct: 563 FTKMKNSTIKPDVVSFNTILGCLSRAGLFEEAAKLMQEM-----SSKGFQYDLITYSSIL 617
Query: 432 DWLGDNRDVEEVEA 445
+ +G D + VE+
Sbjct: 618 EAVGKVDDCKMVES 631
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 116/269 (43%), Gaps = 5/269 (1%)
Query: 138 KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
K+Y L+ Y + G V+E+L L+++M+ + Y ++ +G+ E +
Sbjct: 260 KIYTTLMGIYFKVGKVEEALGLVKEMRARRCLLTVFTYTELIRGLGKSGRVEDAYMTYKN 319
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVAN--YYII 255
M ++G PD IN G + L + EM+ + + + TY+T+ +
Sbjct: 320 MLKDGCKPDVVLMNNLINILGRSNHLRDAIKLFDEMKLL-NCAPNVVTYNTIIKSLFEAK 378
Query: 256 AGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR 315
A L E + + + +D + S + Y+ LI Y ++ + K
Sbjct: 379 APLSEASSWFERMKKDGIVPS--SFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPA 436
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
Y +++ +L + A ++ +E + +C C RV +++ + + G + +A + E+
Sbjct: 437 AYCSLINTLGVAKRYDVANELFQELKENCGCSSARVYAVMIKHFGKCGRLNEAINLFNEM 496
Query: 376 VKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
K G TP +++ + G M++AF
Sbjct: 497 KKLGCTPDVYAYNALMTGMVRAERMDEAF 525
>gi|326494062|dbj|BAJ85493.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 567
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 144/346 (41%), Gaps = 48/346 (13%)
Query: 163 MKEMGSFGSALN---YNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGA 219
+KEMGS +L+ N ++ ++ + + +VL E G PD SY + I + G
Sbjct: 214 VKEMGSVPGSLSTPLLNRVLAMFWKLQKSKAALEVLDKFSEFGCTPDGDSYYLAIQAAGK 273
Query: 220 RSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDA 279
+S + + V ++M S T V + + E +YL E V A
Sbjct: 274 KSMVGAAWGVCEKMISSGCFPDGKKTGEIVTFFCQGKMVTEAHSVYLAAKEKKVQIPTSA 333
Query: 280 LGY--NHLISHYASLGNKDEMMKFWGLQKIK-------------CKKQLNRDYITMLGSL 324
L + L + A++ E++ + +K C+ + D +L +
Sbjct: 334 LDFLVGALAKNDATITTALELLGEYKGDSLKHAGKSFAAVIHSLCRMKNVNDAKKLLMRM 393
Query: 325 VKIG-------------------ELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMI 365
V +G E+E+A+ ++ E D ++I+ GY++ GMI
Sbjct: 394 VNLGPAPGSAVFNFVITGLSKEGEMEDAKDLIRVMESRGLRPDVYTYSVIMSGYAKGGMI 453
Query: 366 EKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE------ALAVHEENKF 419
++A ++L+E K P+ ++ I+ GY EKA EC+KE + E NK
Sbjct: 454 DEAHSLLREAKKIHPKPSRVTYHILIRGYCKMEEFEKALECLKEMKEDGLQPNMDEYNKL 513
Query: 420 WRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNMYHALTE 465
+ SL +DW + +EE+E S L +K R++ A+ E
Sbjct: 514 IQ---SLCLKAMDWRTAEKLLEEMEG--SGLCLKGITRSLIAAVKE 554
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +++ Y + G++DE+ SL+++ K++ S + Y+ ++ Y + EK + L +MK
Sbjct: 440 YSVIMSGYAKGGMIDEAHSLLREAKKIHPKPSRVTYHILIRGYCKMEEFEKALECLKEMK 499
Query: 200 ENGVPPDNFSYRICINSYGARS-ELSSMENVLQEMESQSHISMDWGTYSTVA 250
E+G+ P+ Y I S ++ + + E +L+EME S + + T S +A
Sbjct: 500 EDGLQPNMDEYNKLIQSLCLKAMDWRTAEKLLEEMEG-SGLCLKGITRSLIA 550
>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
Length = 808
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/342 (20%), Positives = 150/342 (43%), Gaps = 21/342 (6%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I++L K A + + M G+A + +++ +D + K + ++ AE + +
Sbjct: 175 IIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAG 234
Query: 135 KVDK--LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
Y +L++ Y G+ +ES+ + ++M G + N N + G+ +
Sbjct: 235 TRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAK 294
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSE--LSSMENVLQEMESQSHISMDWGTYSTVA 250
+ M G PD SY ++ Y ++ L+ + N+ M ++ I+ + ++ +
Sbjct: 295 CIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKG-IAPNKHVFNILI 353
Query: 251 NYYIIAGLKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMM-KFWGLQKI 307
N Y G+ +KA++ ED+ +K D + + +IS +G D+ + KF + I
Sbjct: 354 NAYARCGMMDKAMLIF---EDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI 410
Query: 308 KCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNI-----ILLGYSQK 362
Y ++ GEL +A++++ E D P + I+ ++
Sbjct: 411 GVPPS-EAVYGCLIQGCCNHGELVKAKELISEMMNK----DIPPPGVKYFSSIINNLCKE 465
Query: 363 GMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
G + + ++ +V+ G+ P +++ + GY NME+AF
Sbjct: 466 GRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAF 507
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 102/258 (39%), Gaps = 42/258 (16%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
++ L+N Y R G++D+++ + + M+ G + + ++ G+ + M
Sbjct: 348 VFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHM 407
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
+ GVPP Y I EL + ++ EM ++ +S++ N
Sbjct: 408 VDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLC---- 463
Query: 259 KEKAIIYLKKCEDIVSKS---KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR 315
KE + K D++ ++ + + +N L+ Y +GN +E
Sbjct: 464 KEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEA----------------- 506
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
+L ++ IG E +CY Y V GY + G I+ A V +++
Sbjct: 507 --FALLDAMASIG-----------IEPNCYIYGTLVD-----GYCKNGRIDDALTVFRDM 548
Query: 376 VKKGKTPTPNSWSIIAAG 393
+ KG PT +SII G
Sbjct: 549 LHKGVKPTSVLYSIILHG 566
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/274 (20%), Positives = 118/274 (43%), Gaps = 10/274 (3%)
Query: 137 DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
D +L+ +V++G VD++ L +M E G L N I+ + +K ++
Sbjct: 134 DDFSYSLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQ 193
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
M ++G+ PD F+Y + I+ + E VL++M ++ + TY+++ + Y I+
Sbjct: 194 KMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQM-VEAGTRPNSITYNSLIHGYSIS 252
Query: 257 GLKEKAIIYLKKCED--IVSKSKDALGYNH-LISHYASLGNKDEMMKFWGLQKIKCKKQL 313
G+ +++ K+ ++ + + H L H G +E + +K K
Sbjct: 253 GMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKH----GRTNEAKCIFDSMVLKGPKPD 308
Query: 314 NRDYITMLGSLVKIGE--LEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAV 371
Y TML + L + + + V NI++ Y++ GM++KA +
Sbjct: 309 IISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLI 368
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
+++ KG P +++ + + ++ A
Sbjct: 369 FEDMQNKGMIPDTVTFATVISSLCRIGRLDDALH 402
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 115/266 (43%), Gaps = 4/266 (1%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ +L+ Y G ++E+ +L+ M +G + Y ++ Y G+ + V DM
Sbjct: 490 FNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDML 549
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEM-ESQSHISMDWGTYSTVANYYIIAGL 258
GV P + Y I ++ ++ + + EM ES + +S+ TY V
Sbjct: 550 HKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIH--TYGVVLGGLCRNNC 607
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
++A + L+K + K D + +N +IS +G + E + + + Y
Sbjct: 608 TDEANMLLEKLFAMNVKF-DIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYS 666
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
M+ +L+K EEA+ + E S + D R+ N I+ K + KA L I +
Sbjct: 667 MMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGEN 726
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAF 404
T ++ S++A+ ++ + ++ F
Sbjct: 727 NLTLEASTISLLASLFSREGMIKGLF 752
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 151/342 (44%), Gaps = 8/342 (2%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
++R L + K A++V + + V + + ++ K G+ A + + D+
Sbjct: 218 ILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKG 277
Query: 135 -KVDKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
K D + Y L+N +EG +DE++ + M G + + +N I+ +TG+
Sbjct: 278 CKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAE 337
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
L +M G P ++ I IN + + +VL++M Q + + +Y+ + +
Sbjct: 338 KFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKM-PQHGCTPNSLSYNPLLHA 396
Query: 253 YIIAGLKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCK 310
E+AI YL + +VS+ D + YN L++ G D ++ K
Sbjct: 397 LCKDKKMERAIEYL---DIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGC 453
Query: 311 KQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADA 370
+ Y T++ L K+G+ ++A K+L+E + D + ++ G S++G +++A A
Sbjct: 454 SPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIA 513
Query: 371 VLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
++ + G P +++ I G +A + + +A
Sbjct: 514 FFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVA 555
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 119/293 (40%), Gaps = 40/293 (13%)
Query: 148 VREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDN 207
VR G ++E ++ M G + ++ TG+ K V+ ++++G PD
Sbjct: 121 VRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDV 180
Query: 208 FSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYL- 266
+Y + I+ Y E+ S +L M +S D TY+T+ +G ++A+ L
Sbjct: 181 ITYNVLISGYCKTGEIGSALQLLDRMS----VSPDVVTYNTILRTLCDSGKLKEAMEVLD 236
Query: 267 ----KKC-EDIVSKS----------------------------KDALGYNHLISHYASLG 293
++C D+++ + D + YN LI+ G
Sbjct: 237 RQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEG 296
Query: 294 NKDEMMKFWG-LQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVP 352
DE ++F + C+ + I +L S+ G +AEK L E
Sbjct: 297 RLDEAIRFLNHMPSYGCQPNVITHNI-ILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTF 355
Query: 353 NIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
NI++ +KG+I +A VL+++ + G TP S++ + ME+A E
Sbjct: 356 NILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIE 408
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 41/98 (41%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+ REG VDE+++ ++EMG +A+ YN IM Q + D L M
Sbjct: 495 YSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMV 554
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS 237
G P SY I I +L E+ S+
Sbjct: 555 ARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRG 592
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 126/273 (46%), Gaps = 8/273 (2%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGI---MCLYTNTGQHEKIPDVLL 196
Y L+N + +EG + ++ + ++++ G + +++N + +C N + ++
Sbjct: 226 YNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKT-- 283
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
M+EN + PD F+Y + I+ L E + EM+ Q + + T++ + + +
Sbjct: 284 -MEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQ-QRGLRPNGITFTALIDGQCRS 341
Query: 257 GLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
+ A+ + + K D + YN L++ +G+ ++ K ++ K
Sbjct: 342 RRIDSAMNTYHQMLTMGVKP-DLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKIT 400
Query: 317 YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIV 376
Y T++ K G+LE A ++ + D ++ G+ + G + A+ L+E+V
Sbjct: 401 YTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMV 460
Query: 377 KKGKTPTPNSWSIIAAGYADKNNMEKAFECMKE 409
+ G P +++++ GY K N++ F+ +KE
Sbjct: 461 EAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKE 493
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 100/226 (44%), Gaps = 5/226 (2%)
Query: 78 QLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED-KV 136
Q RSR R A+ M G+ + + L+ + KV + A + + K
Sbjct: 338 QCRSR-RIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKP 396
Query: 137 DKL-YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVL 195
DK+ Y L++ Y +EG ++ ++ + + M E G + + ++ + G+ L
Sbjct: 397 DKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTL 456
Query: 196 LDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYII 255
+M E G+ PD+ +Y + I+ Y + + +L+EM+ H TY+ + N
Sbjct: 457 REMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGH-KPGVITYNVLMNGLCK 515
Query: 256 AGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKF 301
G + A + L+ ++ + D + YN L+ + G ++++K
Sbjct: 516 QGQMKNANMLLEAMLNL-GVTPDDITYNILLEGHCKNGKAEDLLKL 560
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 61/341 (17%), Positives = 134/341 (39%), Gaps = 39/341 (11%)
Query: 63 EGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLES 122
G + + + +I L + ++ + M + V ++V + + K L+
Sbjct: 252 RGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDV 311
Query: 123 AETYFNSLNDEDKVDK--LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMC 180
AE F+ + + AL++ R +D +++ +M MG + YN ++
Sbjct: 312 AEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLN 371
Query: 181 LYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHIS 240
G K ++ +M+ G+ PD +Y I+ Y +L S + + M + +
Sbjct: 372 GLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEG-VV 430
Query: 241 MDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMK 300
+D ++ + + + G A L++ + K DA Y +I Y GN
Sbjct: 431 LDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDAT-YTMVIDGYCKKGN------ 483
Query: 301 FWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYS 360
VK+G K+L+E +++ + N+++ G
Sbjct: 484 ------------------------VKMGF-----KLLKEMQINGHKPGVITYNVLMNGLC 514
Query: 361 QKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNME 401
++G ++ A+ +L+ ++ G TP +++I+ G+ E
Sbjct: 515 KQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAE 555
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 117/307 (38%), Gaps = 42/307 (13%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESA-ETYFNSLNDE 133
+I L R A Q+ + M +GL + +D + R ++SA TY L
Sbjct: 299 LIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMG 358
Query: 134 DKVD-KLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
K D +Y LLN + G V+++ L+ +M+ +G + Y ++ Y G E
Sbjct: 359 VKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAM 418
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
++ M E GV DN ++ I+ + + E L+EM
Sbjct: 419 EIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREM------------------- 459
Query: 253 YIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQ 312
+ AG+K D Y +I Y GN K +I K
Sbjct: 460 -VEAGMKP-----------------DDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKP 501
Query: 313 LNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
Y ++ L K G+++ A +LE D NI+L G+ + G KA+ +L
Sbjct: 502 GVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG---KAEDLL 558
Query: 373 KEIVKKG 379
K +KG
Sbjct: 559 KLRNEKG 565
>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
Length = 1603
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 127/280 (45%), Gaps = 18/280 (6%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y A+++ ++ GLV+ + +M+ MG + YN ++ Y G ++ + D++
Sbjct: 1228 YNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLR 1287
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYII--AG 257
G+ P +Y I I+ Y +L + +EM Q G V Y I+
Sbjct: 1288 RAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQ-------GCLPNVCTYTILMKGS 1340
Query: 258 LKEKAIIYLKKCED-IVSKS--KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLN 314
L +++ ++ D ++SK D YN I LG ++ + + L+++ + ++
Sbjct: 1341 LNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILG---DIARAFELREVLMLEGIS 1397
Query: 315 RDYIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAV 371
D +T ++ L K G L++A+++ + + D ++ + ++G++ +A +
Sbjct: 1398 SDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKI 1457
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
++ G P+ ++++I Y + N+ A+ ++ L
Sbjct: 1458 FNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKML 1497
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 120/275 (43%), Gaps = 40/275 (14%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGS--FGSALNYNGIMCLYTNTGQHEKIPDVLLD 197
Y LL+ +++EG D+ L+++M+ GS + + YN ++ T G E+ +++
Sbjct: 1122 YNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEG 1181
Query: 198 MKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAG 257
M+ + +F+Y I AR + + ++ EME++ I TY+ + + + +G
Sbjct: 1182 MRLSK-KASSFTYNPLITGLLARGCVKKVYDLQLEMENEG-IMPTVVTYNAMIHGLLQSG 1239
Query: 258 LKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
L E A + + + D + YN L++ Y GN E +
Sbjct: 1240 LVEAAQVKFAEMR-AMGLLPDVITYNSLLNGYCKAGNLKEAL------------------ 1280
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
+ G L + G A +L NI++ GY + G +E+A + +E+ +
Sbjct: 1281 -LLFGDLRRAGL---APTVLTY-------------NILIDGYCRLGDLEEARILKEEMGE 1323
Query: 378 KGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALA 412
+G P +++I+ G + ++ A E E L+
Sbjct: 1324 QGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLS 1358
>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
Length = 740
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/342 (20%), Positives = 150/342 (43%), Gaps = 21/342 (6%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+I++L K A + + M G+A + +++ +D + K + ++ AE + +
Sbjct: 89 IIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAG 148
Query: 135 KVDK--LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
Y +L++ Y G+ +ES+ + ++M G + N N + G+ +
Sbjct: 149 TRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAK 208
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSE--LSSMENVLQEMESQSHISMDWGTYSTVA 250
+ M G PD SY ++ Y ++ L+ + N+ M ++ I+ + ++ +
Sbjct: 209 CIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKG-IAPNKHVFNILI 267
Query: 251 NYYIIAGLKEKAIIYLKKCEDIVSKS--KDALGYNHLISHYASLGNKDEMM-KFWGLQKI 307
N Y G+ +KA++ ED+ +K D + + +IS +G D+ + KF + I
Sbjct: 268 NAYARCGMMDKAMLIF---EDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI 324
Query: 308 KCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNI-----ILLGYSQK 362
Y ++ GEL +A++++ E D P + I+ ++
Sbjct: 325 GVPPS-EAVYGCLIQGCCNHGELVKAKELISEMMNK----DIPPPGVKYFSSIINNLCKE 379
Query: 363 GMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
G + + ++ +V+ G+ P +++ + GY NME+AF
Sbjct: 380 GRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAF 421
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 102/258 (39%), Gaps = 42/258 (16%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
++ L+N Y R G++D+++ + + M+ G + + ++ G+ + M
Sbjct: 262 VFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHM 321
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
+ GVPP Y I EL + ++ EM ++ +S++ N
Sbjct: 322 VDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNL----C 377
Query: 259 KEKAIIYLKKCEDIVSKS---KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR 315
KE + K D++ ++ + + +N L+ Y +GN +E
Sbjct: 378 KEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEA----------------- 420
Query: 316 DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEI 375
+L ++ IG E +CY Y V GY + G I+ A V +++
Sbjct: 421 --FALLDAMASIG-----------IEPNCYIYGTLVD-----GYCKNGRIDDALTVFRDM 462
Query: 376 VKKGKTPTPNSWSIIAAG 393
+ KG PT +SII G
Sbjct: 463 LHKGVKPTSVLYSIILHG 480
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/274 (20%), Positives = 118/274 (43%), Gaps = 10/274 (3%)
Query: 137 DKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLL 196
D +L+ +V++G VD++ L +M E G L N I+ + +K ++
Sbjct: 48 DDFSYSLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQ 107
Query: 197 DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIA 256
M ++G+ PD F+Y + I+ + E VL++M ++ + TY+++ + Y I+
Sbjct: 108 KMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQM-VEAGTRPNSITYNSLIHGYSIS 166
Query: 257 GLKEKAIIYLKKCED--IVSKSKDALGYNH-LISHYASLGNKDEMMKFWGLQKIKCKKQL 313
G+ +++ K+ ++ + + H L H G +E + +K K
Sbjct: 167 GMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKH----GRTNEAKCIFDSMVLKGPKPD 222
Query: 314 NRDYITMLGSLVKIGE--LEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAV 371
Y TML + L + + + V NI++ Y++ GM++KA +
Sbjct: 223 IISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLI 282
Query: 372 LKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
+++ KG P +++ + + ++ A
Sbjct: 283 FEDMQNKGMIPDTVTFATVISSLCRIGRLDDALH 316
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 111/257 (43%), Gaps = 4/257 (1%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ +L+ Y G ++E+ +L+ M +G + Y ++ Y G+ + V DM
Sbjct: 404 FNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDML 463
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEM-ESQSHISMDWGTYSTVANYYIIAGL 258
GV P + Y I ++ ++ + + EM ES + +S+ TY V
Sbjct: 464 HKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIH--TYGVVLGGLCRNNC 521
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
++A + L+K + K D + +N +IS +G + E + + + Y
Sbjct: 522 TDEANMLLEKLFAMNVKF-DIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYS 580
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
M+ +L+K EEA+ + E S + D R+ N I+ K + KA L I +
Sbjct: 581 MMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGEN 640
Query: 379 GKTPTPNSWSIIAAGYA 395
T ++ S++A+ ++
Sbjct: 641 NLTLEASTISLLASLFS 657
>gi|224085950|ref|XP_002307751.1| predicted protein [Populus trichocarpa]
gi|222857200|gb|EEE94747.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 93/447 (20%), Positives = 178/447 (39%), Gaps = 71/447 (15%)
Query: 42 RISPLGDPDVSLTPV---LDQWVLEGQKISELELQRVIRQ---LRSRKRFKHALQVSEWM 95
R +P DP +++ + Q + + IS ++ VI Q +R L W
Sbjct: 25 RKTPPPDPTYTISSLSLDFSQIISTVRSISPSIVRHVIAQSSAVRHGIPVPQVLAFFNWA 84
Query: 96 SGQ-GLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVD---KLYGALLNCYVREG 151
S Q G S + +D G+V + A YF L VD + + L+ YVR G
Sbjct: 85 SNQDGFRKSPEAYNEMVDFSGQVMMFDVA-WYFIDLMKARNVDVTVETFLILMRRYVRAG 143
Query: 152 LVDESLSLMQKMKEMGSFGSALNYN---GIMCLYTNTGQHEKI---------PDVLL--- 196
L E++ +M++ + ++ I+C Q ++ PDV++
Sbjct: 144 LAAEAIHAFNRMEDYNCKPDKIAFSILISILCRERRASQAQEFFDSLKDKFEPDVIVYTN 203
Query: 197 -------------------DMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQS 237
+MK G+ P+ ++Y I I+S +++ ++ EM
Sbjct: 204 LVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDIFAEM---- 259
Query: 238 HISMDWG------TYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYAS 291
+D G TY+++ ++ AG EK + + + + + D + YN LI +
Sbjct: 260 ---LDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEP-DTVTYNFLIETHCK 315
Query: 292 LGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEW-ELSCYCYDFR 350
N ++ +K GL K + T+ G + K+G++ A +M ++ EL+C
Sbjct: 316 DENLEDAIKVIGLMAKKGCAPNASTFNTLFGCIAKLGDVNAAHRMYKKMKELNCEANTVT 375
Query: 351 VPNIILLGYSQKGMIEKADAVLK---EIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECM 407
++ + + K D VLK E+ + P N++ ++ Y + A++
Sbjct: 376 YNTLMKMFVASKS----TDMVLKLKTEMDENKIEPNVNTYKVLITMYCGMGHWNNAYKFF 431
Query: 408 KEALAVHEENKFWRPKPSLVSSILDWL 434
+E + + K RP + +L L
Sbjct: 432 REMI----DEKCLRPSLPVYDMVLQQL 454
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/247 (19%), Positives = 109/247 (44%), Gaps = 5/247 (2%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +++ R G + + + +M + G +++ YN +M ++ G+ EK+ V MK
Sbjct: 236 YSIVIDSLCRCGQITRAHDIFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMK 295
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G PD +Y I ++ L V+ M ++ + + T++T+ G
Sbjct: 296 RLGCEPDTVTYNFLIETHCKDENLEDAIKVIGLM-AKKGCAPNASTFNTLFGCIAKLGDV 354
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWG-LQKIKCKKQLNRDYI 318
A KK +++ ++ + + YN L+ + + + D ++K + + K + +N Y
Sbjct: 355 NAAHRMYKKMKELNCEA-NTVTYNTLMKMFVASKSTDMVLKLKTEMDENKIEPNVN-TYK 412
Query: 319 TMLGSLVKIGELEEAEKMLEEW-ELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
++ +G A K E + C V +++L + G ++K + +++++V
Sbjct: 413 VLITMYCGMGHWNNAYKFFREMIDEKCLRPSLPVYDMVLQQLRKAGQLKKHEELVEKMVD 472
Query: 378 KGKTPTP 384
+G P
Sbjct: 473 RGFVTRP 479
>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 118/266 (44%), Gaps = 24/266 (9%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y +++ + G++ ++ LM+ M G + Y ++ Y +TG+ + +VL +M
Sbjct: 273 YNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMM 332
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+G P+N++ I + S +S E +LQ+M + ++ TV +I GL
Sbjct: 333 RDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYV------IDTVTCNIVIDGLC 386
Query: 260 EKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGL-----QKIKCKKQLN 314
L K +IV+ + H + +LGN + GL + KC L
Sbjct: 387 NNG--KLDKAIEIVNGM-----WTHGSAALGNLGN-----SYIGLVDDSDSRKKCMPDL- 433
Query: 315 RDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
Y T++ L K G + EA+K E D + ++ + + ++G I A VLK+
Sbjct: 434 ISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKD 493
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNNM 400
+ KKG T +++ + G KN +
Sbjct: 494 MEKKGCNKTLQTYNSLIMGLGSKNQI 519
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 110/262 (41%), Gaps = 12/262 (4%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
LY LL +EG VD L + M G +N ++ L ++G + ++ M
Sbjct: 23 LYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDARELFDKM 82
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
E G P+ +S+ I + Y S +L EM + + V N I +
Sbjct: 83 PEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRR-----LGFSPNKVVYNTLISSFC 137
Query: 259 KEKAIIYLKKCEDIVSK---SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR 315
KE +K D + K S D + +N IS S G E + + +I L +
Sbjct: 138 KEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQ 197
Query: 316 ----DYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAV 371
Y MLG K G LEEA + E+ ++S + NI LLG + G + +A V
Sbjct: 198 PNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLV 257
Query: 372 LKEIVKKGKTPTPNSWSIIAAG 393
LKE+V G P S++I+ G
Sbjct: 258 LKEMVDMGMEPNVYSYNIVMDG 279
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 115/277 (41%), Gaps = 39/277 (14%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ L+N + G +L L ++MK G + YN ++ + G+ K D+L DM+
Sbjct: 394 FNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDME 453
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G P +Y I+ + + E V +M+ Q IS + T++T +I GL
Sbjct: 454 STGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG-ISRNAITFNT-----LIDGL- 506
Query: 260 EKAIIYLKKCEDIVSKSKDALGY-NHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
C+D K DA G N +IS GLQ N Y
Sbjct: 507 ---------CKD--KKIDDAFGLINQMISE--------------GLQPN------NITYN 535
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
++L K G++++A +LE + + D ++ G + G + A VL+ + K
Sbjct: 536 SILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIK 595
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHE 415
G PTP +++ + +NN+ A +E V E
Sbjct: 596 GMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGE 632
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 91/437 (20%), Positives = 181/437 (41%), Gaps = 35/437 (8%)
Query: 61 VLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGL 120
++EG K+ LE V ++ +R + + M A V + L+ + RG+
Sbjct: 156 LVEGSKMKLLE--SVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSS-RGV 212
Query: 121 ESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMC 180
ET F +L + +V EG ++ +L + +M EMG + + N ++
Sbjct: 213 APDETTFTTL-------------MQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 259
Query: 181 LYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHIS 240
Y G+ E + +G PD +Y +N + V+ M + H
Sbjct: 260 GYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGH-D 318
Query: 241 MDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMK 300
D TY+ V N G E+A L + D D +N LI A+L + + +
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVD-RGCLPDITTFNTLI---AALCTGNRLEE 374
Query: 301 FWGLQKIKCKKQLNRDYIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILL 357
L + K ++ D T ++ +L K+G+ A ++ EE + S D N ++
Sbjct: 375 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 434
Query: 358 GYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEA-LAVHEE 416
G + KA +LK++ G + +++ I G K +E+A E + L
Sbjct: 435 NLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISR 494
Query: 417 NKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIK-VQKRNM-YHALTEAHIRSG--Q 472
N ++++D L ++ +++ ++ + + +Q N+ Y+++ + + G +
Sbjct: 495 NAIT------FNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIK 548
Query: 473 EVDGLLESMKADDIDED 489
+ +LE+M A+ + D
Sbjct: 549 KAADILETMTANGFEVD 565
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 122/272 (44%), Gaps = 6/272 (2%)
Query: 142 ALLNCYVREGLVDESLSLM--QKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ L+ Y + L D+++ L+ Q G + YN ++ + + + + V +M
Sbjct: 114 SFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMG 173
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G+ PD ++ + + ++ + +L+EM S+ ++ D T++T+ ++ G
Sbjct: 174 ARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRG-VAPDETTFTTLMQGFVEEGSI 232
Query: 260 EKAI-IYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
E A+ + + E S +K + N LI+ Y LG ++ + + + + Y
Sbjct: 233 EAALRVKARMLEMGCSATK--VTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYN 290
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
T + L + + A K+++ + D NI++ + G +E+A +L ++V +
Sbjct: 291 TFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDR 350
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAFECMKEA 410
G P +++ + A N +E+A + ++
Sbjct: 351 GCLPDITTFNTLIAALCTGNRLEEALDLARQV 382
Score = 38.1 bits (87), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 68/160 (42%), Gaps = 3/160 (1%)
Query: 56 VLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIG 115
+++Q + EG + + + ++ + K A + E M+ G V + ++ +
Sbjct: 518 LINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLC 577
Query: 116 KVRGLESAETYFNSLNDED--KVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 173
K + A + + K Y +L R + ++LSL ++M E+G AL
Sbjct: 578 KAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDAL 637
Query: 174 NYNGIM-CLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
Y + L G ++ D +L+M + G P+ S+R+
Sbjct: 638 TYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRM 677
>gi|224094727|ref|XP_002310210.1| predicted protein [Populus trichocarpa]
gi|222853113|gb|EEE90660.1| predicted protein [Populus trichocarpa]
Length = 396
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 125/280 (44%), Gaps = 24/280 (8%)
Query: 135 KVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDV 194
K + +L+ Y G+ D++L Q+M ++G+ S +++N ++ + ++K+P +
Sbjct: 88 KQEPFLSSLIRSYGVAGMFDQALKTYQEMDQLGTPRSCISFNALLSACIQSKLYKKVPVL 147
Query: 195 LLDMKEN-GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYY 253
++ E V PD SY + + +Y + VL EME + + + + V N
Sbjct: 148 FNEISEKYRVLPDTVSYGMLVKAYCEDGKPEKAIEVLGEMEKKG-VEVTAIVCTPVLNCL 206
Query: 254 IIAGLKEKAIIYL-----KKCEDIVSKSKDALGYNHLISHYASLGNKD-----EMMKFWG 303
G K++A +L + CE DA+ YN IS+ S G + E M+ +G
Sbjct: 207 YSKGKKDEAERFLDGMVERGCE------LDAVVYNVKISNAVSQGPERVKELIEEMESYG 260
Query: 304 LQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKG 363
L K Y ++ S G +EEA+K+ EE+ + + ++ + G
Sbjct: 261 L------KPDTISYNYLMTSYCTSGMMEEAKKVYEEFRVHGCKANAATFRTLVFNLCKSG 314
Query: 364 MIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
EK + K+ VK + P N+ + G +K +++A
Sbjct: 315 EYEKGYEIFKDSVKVHRIPDFNTLKYLVKGLVEKKKIKEA 354
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 156/357 (43%), Gaps = 15/357 (4%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
++ L+ Y +G VD+++ + KM++ G +A+ Y ++ + +G+ E M
Sbjct: 373 VFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM 432
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
+ G+ P N Y I+ ++ E ++ EM + I ++ ++++ + +
Sbjct: 433 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG-ICLNTIFFNSIIDSHC---- 487
Query: 259 KEKAIIYLKKCEDIVSK---SKDALGYNHLISHYASLGNKDEMMKFW-GLQKIKCKKQLN 314
KE +I +K +++ + + + YN LI+ Y G DE MK G+ + K
Sbjct: 488 KEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPN-T 546
Query: 315 RDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKE 374
Y T++ KI +E+A + +E E S D NIIL G Q A +
Sbjct: 547 VTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVR 606
Query: 375 IVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWL 434
I + G ++++II G + A + M + L + + R ++ ++L +
Sbjct: 607 ITESGTQIELSTYNIILHGLCKNKLTDDALQ-MFQNLCLMDLKLEARTFNIMIDALLK-V 664
Query: 435 GDNRDVEEVEAFVSSLKIKVQKRNMYHALTEAHIRSG--QEVDGLLESMKADDIDED 489
G N + +++ SS + V Y + E I G +E+D L SM+ + D
Sbjct: 665 GRNDEAKDLFVAFSSNGL-VPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVD 720
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 124/312 (39%), Gaps = 57/312 (18%)
Query: 140 YGALLNCYVREGLVDESLS------------------------------------LMQKM 163
YG L+ C R G +D + ++++M
Sbjct: 90 YGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRM 149
Query: 164 KEMGSFGSALNYNGI---MCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGAR 220
E+G + +YN + +C + + ++ ++ D + G PPD SY IN +
Sbjct: 150 TELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKE 209
Query: 221 SELSSMENVLQEMESQSHISMDWGTYSTVANY-YIIAGL-KEKAIIYLKKCEDIVSKS-- 276
+ + EM +D G V Y IIA L K +A+ + + + K+
Sbjct: 210 GDSDKAYSTYHEM-------LDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 262
Query: 277 -KDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYIT---MLGSLVKIGELEE 332
D + YN ++ Y S G E + F L+K++ + D +T ++ L K G E
Sbjct: 263 MPDCMTYNSILHGYCSSGQPKEAIGF--LKKMR-SDGVEPDVVTYSLLMDYLCKNGRCME 319
Query: 333 AEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAA 392
A K+ + + +L GY+ KG + + +L +V+ G P +SI+
Sbjct: 320 ARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILIC 379
Query: 393 GYADKNNMEKAF 404
YA++ +++A
Sbjct: 380 AYANQGKVDQAM 391
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 120/283 (42%), Gaps = 24/283 (8%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y ++N + +EG D++ S +M + G + YN I+ +K +VL M
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMV 258
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+NGV PD +Y ++ Y + + L++M S + D TYS + +Y G
Sbjct: 259 KNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDG-VEPDVVTYSLLMDYLCKNGRC 317
Query: 260 EKAIIYLKKCEDIVSK---SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRD 316
+A +K D ++K + Y L+ YA+ G EM GL + + ++ D
Sbjct: 318 MEA----RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEM---HGLLDLMVRNGIHPD 370
Query: 317 YIT---MLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLG-----YSQKGMIEKA 368
+ ++ + G++++A + + PN + G + G +E A
Sbjct: 371 HYVFSILICAYANQGKVDQAMLVFSKMR-----QQGLNPNAVTYGAVIGILCKSGRVEDA 425
Query: 369 DAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEAL 411
++++ +G +P ++ + G N E+A E + E L
Sbjct: 426 MLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML 468
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 124/280 (44%), Gaps = 32/280 (11%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+ ++++ + +EG V ES L + M +G + + YN ++ Y G+ ++ +L M
Sbjct: 478 FFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGM 537
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVL---QEMESQSHISMDWGTYSTVANYYI- 254
G+ P+ +Y IN Y ++S ME+ L +EMES S +S D TY+ +
Sbjct: 538 VSVGLKPNTVTYSTLINGY---CKISRMEDALVLFKEMES-SGVSPDIITYNIILQGLFQ 593
Query: 255 ---IAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNK---DEMMKFWGLQKIK 308
A KE +Y++ E S ++ L ++I H NK D + F L +
Sbjct: 594 TRRTAAAKE---LYVRITE---SGTQIELSTYNIILH-GLCKNKLTDDALQMFQNLCLMD 646
Query: 309 CKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSC-----YCYDFRVPNIILLGYSQKG 363
K + R + M+ +L+K+G +EA+ + + + + Y NII +G
Sbjct: 647 LKLE-ARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENII-----GQG 700
Query: 364 MIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
++E+ D + + G T + I + + +A
Sbjct: 701 LLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 740
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 104/241 (43%), Gaps = 6/241 (2%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+N Y G +DE++ L+ M +G + + Y+ ++ Y + E + +M+
Sbjct: 514 YNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEME 573
Query: 200 ENGVPPDNFSYRICINS-YGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
+GV PD +Y I + + R ++ E ++ ES + I + TY+ + + L
Sbjct: 574 SSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELS--TYNIILHGLCKNKL 631
Query: 259 KEKAI-IYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDY 317
+ A+ ++ C ++ +A +N +I +G DE + Y
Sbjct: 632 TDDALQMFQNLC--LMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTY 689
Query: 318 ITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVK 377
M +++ G LEE +++ E + D + N I+ Q+G I +A L I +
Sbjct: 690 RLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDE 749
Query: 378 K 378
K
Sbjct: 750 K 750
>gi|242039913|ref|XP_002467351.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
gi|241921205|gb|EER94349.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
Length = 846
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 114/267 (42%), Gaps = 9/267 (3%)
Query: 153 VDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRI 212
+D++ L++ E G+ S +N ++ Y+ G HE+ ++ M + G+ P + ++
Sbjct: 407 LDDAWELLRGAIEQGAPLSVTGFNALIAAYSKEGLHEEAFELYRIMNKLGLAPSSSTFNY 466
Query: 213 CINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDI 272
I + L + +L+ M S+ + ST + A +E + KC D
Sbjct: 467 LIMGLCNQGRLDEAQLLLEHMVSKGY------CLSTSFTICLDASFREGNAVCALKCWDD 520
Query: 273 VSK---SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGE 329
+ K D + ++ I+ L +E + + + N Y +++ +L + G
Sbjct: 521 MGKLGLQPDFIAFSAYINGLCRLDYVNEAYQAFAEMTARGIVPNNFTYNSIISALCRAGN 580
Query: 330 LEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSI 389
+ EA K+ + + D NI++ G ++G +E D +L ++ G TP +++
Sbjct: 581 MTEALKLQQNMRQNGLVPDIYTSNILIDGLCREGKLEMVDNLLLDMCSNGLTPDTVTYNT 640
Query: 390 IAAGYADKNNMEKAFECMKEALAVHEE 416
I Y +M A M + LA E
Sbjct: 641 IINAYCRAKDMNSAMNFMNKMLAAGCE 667
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 91/204 (44%), Gaps = 17/204 (8%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
+ A +N R V+E+ +M G + YN I+ G + + +M+
Sbjct: 533 FSAYINGLCRLDYVNEAYQAFAEMTARGIVPNNFTYNSIISALCRAGNMTEALKLQQNMR 592
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
+NG+ PD ++ I I+ +L ++N+L +M S ++ D TY+T+ N Y A
Sbjct: 593 QNGLVPDIYTSNILIDGLCREGKLEMVDNLLLDMCSNG-LTPDTVTYNTIINAYCRAKDM 651
Query: 260 EKAIIYLKK-----CE-DIVSKS--KDALGYNHLISH-------YASLGNKDEMMKFWGL 304
A+ ++ K CE DI + + +L NH+++ ++G + + + L
Sbjct: 652 NSAMNFMNKMLAAGCEPDIFTYNIWMHSLCSNHMLNQAGKVLDELVAMGCPPDSVTYNTL 711
Query: 305 QKIKCKKQLNRDYITMLGSLVKIG 328
C L+R I + G L+K+
Sbjct: 712 MDGICSDVLDRAMI-LTGRLIKMA 734
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 104/244 (42%), Gaps = 23/244 (9%)
Query: 182 YTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISM 241
+ G + DVL ++ +G P + + E+ + NV +EM ++
Sbjct: 159 FLAAGMAAEALDVLTRVRRSGKTPSLSALAALLRLLFRSGEVHAAWNVFEEMAAR----- 213
Query: 242 DWGTYSTVANY-YIIAGLKEKAIIYLKK-CEDIVSK---SKDALGYNHLISHYASLG-NK 295
G ++A + +I G + ++ + I+ + + YN LI + G ++
Sbjct: 214 --GPRPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIKGHCVFGWSR 271
Query: 296 DEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNII 355
D F + + C+ + Y ++ L G + EA ++ +E + N++
Sbjct: 272 DAFKLFEEMHRSGCEPTV-VTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTITFNVL 330
Query: 356 LLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHE 415
+ GY++ G +++A A +E+ +G P +++IIAAG A++ A VH+
Sbjct: 331 IDGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAG---------AYKFGHAAQLVHD 381
Query: 416 ENKF 419
+ F
Sbjct: 382 HDMF 385
>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
Length = 1356
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 155/336 (46%), Gaps = 10/336 (2%)
Query: 75 VIRQLRSRKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDED 134
+IR +A++ E + G SV+ + L + K + E + F ++D+
Sbjct: 169 LIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKG 228
Query: 135 KVDKL--YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIP 192
+ + L+N EG + ++ +L+++M+E G + + YN ++ Y G+++
Sbjct: 229 ICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAI 288
Query: 193 DVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANY 252
+++ M G+ D +Y + I++ + +L++M + IS + TY+T+ N
Sbjct: 289 ELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEM-ISPNEVTYNTLING 347
Query: 253 YIIAGLKEKAIIYLKKCEDIVSK---SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKC 309
++ KE I + + +SK S + + YN LI + +G+ +E ++ +
Sbjct: 348 FV----KEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAG 403
Query: 310 KKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKAD 369
+ Y T+L L K + E A+++LE ++ +++ G + GM+++A
Sbjct: 404 LRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAV 463
Query: 370 AVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFE 405
++ + K G P ++S + G+ N++ A E
Sbjct: 464 QLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKE 499
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 151/357 (42%), Gaps = 40/357 (11%)
Query: 76 IRQLRSRKRFKHALQVSEWM---SGQGLAFSVHDHAVQLDLIGKVRGLESAETY------ 126
++QLR + AL+ +W+ G L H + + ++ K R +SA++
Sbjct: 82 LKQLRPVHG-RLALKFLKWVIKQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQ 140
Query: 127 --------FNSLNDE----DKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALN 174
F +L D + + ++ L+ Y++EG++D ++ + + +G S
Sbjct: 141 MGIGSKSIFGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYT 200
Query: 175 YNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEME 234
N I+ + E + + +M + G+ P+ ++ I IN L N+L++ME
Sbjct: 201 CNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQME 260
Query: 235 SQSHISMDWGTYSTVANYYIIAGLKEKAI--IYLKKCEDIVSKSKDALGYNHLISHYASL 292
+ TY+T+ N+Y G + AI I C+ I D YN I + +
Sbjct: 261 ENGFVP-TIVTYNTLLNWYCKKGRYKAAIELIDYMICKGI---EADVCTYNVFIDNLCT- 315
Query: 293 GNKDEMMKFWGLQKIKCKKQLNRD---YITMLGSLVKIGELEEAEKMLEE---WELSCYC 346
N + L+K++ K+ ++ + Y T++ VK G++ A ++ E ++LS C
Sbjct: 316 -NHRSAKAYLLLKKMR-KEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNC 373
Query: 347 YDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKA 403
+ N ++ G+ G E+A +L + G ++ + G E A
Sbjct: 374 VTY---NALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELA 427
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 78/426 (18%), Positives = 171/426 (40%), Gaps = 37/426 (8%)
Query: 82 RKRFKHALQVSEWMSGQGLAFSVHDHAVQLDLIGKVRGLESAETYFNSLNDE--DKVDKL 139
+ R+K A+++ ++M +G+ V + V +D + A + E +
Sbjct: 281 KGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVT 340
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L+N +V+EG + + + +M + + + YN ++ + + G E+ +L M+
Sbjct: 341 YNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHME 400
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLK 259
G+ + +Y +N + + +L+ M + +A +I GL
Sbjct: 401 AAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMV------VGHIAYTVLIDGLC 454
Query: 260 EKAIIYLKKCEDIVSK------SKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQ- 312
+ + L + +V + D + Y+ LI+ + +GN ++I C+
Sbjct: 455 KNGM--LDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSA------KEIICRMYR 506
Query: 313 ----LNRD-YITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEK 367
LN+ Y T++ + + G + EA K+ + + D N+++ + G + +
Sbjct: 507 SGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGE 566
Query: 368 ADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLV 427
A+ L + + G P ++ I GY + AF + + + F+
Sbjct: 567 AEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFT-----Y 621
Query: 428 SSILDWLGDNRDVEEVEAFVSSLKIKVQKRN--MYHALTEAHIRSG--QEVDGLLESMKA 483
S+L L ++ E + F++ L + MY+ L +SG E L + M
Sbjct: 622 GSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQ 681
Query: 484 DDIDED 489
+++ D
Sbjct: 682 NNVLPD 687
>gi|297805886|ref|XP_002870827.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316663|gb|EFH47086.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 582
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 126/275 (45%), Gaps = 7/275 (2%)
Query: 142 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 201
LLN V+E L D + +KM ++G + YN ++ + +G EK +L +M+E
Sbjct: 173 VLLNSLVKERLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDSEKAEKLLSEMEEK 232
Query: 202 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 261
GV PD F+Y I+ Y +S +V ME +S ++ D TY+++ + + G +
Sbjct: 233 GVFPDIFTYNTLISVYCKKSMHFEALSVQDRME-RSGVAPDIVTYNSLIHGFSREGRMRE 291
Query: 262 AIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYITML 321
A +K + +V + + Y LI Y + + DE ++ + + + Y ++L
Sbjct: 292 ATRLFRKIKGVV--MANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFCPGVVTYNSIL 349
Query: 322 GSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKT 381
L + G + EA ++L E + D N ++ Y + + A V K++++ G
Sbjct: 350 RKLCEDGRIREANRLLTEMSVKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLK 409
Query: 382 PTPNSWSIIAAGYAD----KNNMEKAFECMKEALA 412
S+ + G+ N E+ F +++ L+
Sbjct: 410 LDMYSYKALIHGFCKVLELDNAKEELFSMIEKGLS 444
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 60/340 (17%), Positives = 146/340 (42%), Gaps = 10/340 (2%)
Query: 139 LYGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDM 198
+Y L++ + G +++ L+ +M+E G F YN ++ +Y H + V M
Sbjct: 205 VYNVLVHACSKSGDSEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRM 264
Query: 199 KENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGL 258
+ +GV PD +Y I+ + + + ++++ + + TY+T+ + Y
Sbjct: 265 ERSGVAPDIVTYNSLIHGFSREGRMREATRLFRKIKGV--VMANHVTYTTLIDGYCRMND 322
Query: 259 KEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNRDYI 318
++A + L++ + + YN ++ G E + +K + N
Sbjct: 323 IDEA-LRLREVMESRGFCPGVVTYNSILRKLCEDGRIREANRLLTEMSVKKIEPDNITCN 381
Query: 319 TMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKK 378
T++ + KI ++ A K+ ++ S D ++ G+ + ++ A L +++K
Sbjct: 382 TLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELDNAKEELFSMIEK 441
Query: 379 GKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNR 438
G +P +++S + G+ ++N ++ + +E E + P +L ++ +
Sbjct: 442 GLSPGYSAYSWLVDGFYNQNKQDEITKLPEEF-----EKRGLCPDVALYRGLIRRICKLE 496
Query: 439 DVEEVEAFVSSLKIK--VQKRNMYHALTEAHIRSGQEVDG 476
V+ + S++ K + +Y + A+ R+G+ D
Sbjct: 497 QVDYAKVLFESMEKKGLMGDSVIYTTMAYAYWRTGKVTDA 536
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 115/272 (42%), Gaps = 16/272 (5%)
Query: 140 YGALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMK 199
Y L++ Y R +DE+L L + M+ G + YN I+ G+ + +L +M
Sbjct: 310 YTTLIDGYCRMNDIDEALRLREVMESRGFCPGVVTYNSILRKLCEDGRIREANRLLTEMS 369
Query: 200 ENGVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYI----I 255
+ PDN + IN+Y ++ S V ++M +S + +D +Y + + + +
Sbjct: 370 VKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKM-IESGLKLDMYSYKALIHGFCKVLEL 428
Query: 256 AGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLGNKDEMMKFWGLQKIKCKKQLNR 315
KE+ ++K S Y+ L+ + + +DE+ K L + K+ L
Sbjct: 429 DNAKEELFSMIEK-----GLSPGYSAYSWLVDGFYNQNKQDEITK---LPEEFEKRGLCP 480
Query: 316 DYITMLGSLVKIGELEE---AEKMLEEWELSCYCYDFRVPNIILLGYSQKGMIEKADAVL 372
D G + +I +LE+ A+ + E E D + + Y + G + A A+
Sbjct: 481 DVALYRGLIRRICKLEQVDYAKVLFESMEKKGLMGDSVIYTTMAYAYWRTGKVTDASALF 540
Query: 373 KEIVKKGKTPTPNSWSIIAAGYADKNNMEKAF 404
+ + + ++A YA N++ + F
Sbjct: 541 DVMYNRRLMVNLKLYKSLSASYAGDNDVLRFF 572
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.133 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,619,436,534
Number of Sequences: 23463169
Number of extensions: 317748248
Number of successful extensions: 892640
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3123
Number of HSP's successfully gapped in prelim test: 3090
Number of HSP's that attempted gapping in prelim test: 845073
Number of HSP's gapped (non-prelim): 26737
length of query: 490
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 343
effective length of database: 8,910,109,524
effective search space: 3056167566732
effective search space used: 3056167566732
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 79 (35.0 bits)