Query 011238
Match_columns 490
No_of_seqs 208 out of 478
Neff 3.0
Searched_HMMs 46136
Date Thu Mar 28 23:08:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011238.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011238hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0431 Auxilin-like protein a 100.0 1.6E-41 3.5E-46 349.8 22.7 425 1-488 1-453 (453)
2 COG0484 DnaJ DnaJ-class molecu 99.2 1.9E-11 4.1E-16 125.4 5.4 56 425-487 6-61 (371)
3 PRK09430 djlA Dna-J like membr 99.1 8.4E-11 1.8E-15 114.9 6.8 63 424-486 201-263 (267)
4 KOG0713 Molecular chaperone (D 99.1 8.1E-11 1.8E-15 119.4 5.2 58 423-487 16-73 (336)
5 smart00271 DnaJ DnaJ molecular 99.1 2.2E-10 4.8E-15 85.9 6.0 56 425-486 3-58 (60)
6 cd06257 DnaJ DnaJ domain or J- 99.1 2.7E-10 5.9E-15 83.9 5.8 54 425-485 2-55 (55)
7 PRK14288 chaperone protein Dna 99.0 3.5E-10 7.6E-15 114.5 5.4 57 424-487 4-60 (369)
8 PF00226 DnaJ: DnaJ domain; I 99.0 9.2E-10 2E-14 84.2 5.5 55 426-486 3-57 (64)
9 PRK14296 chaperone protein Dna 98.9 1.1E-09 2.3E-14 111.3 5.2 55 425-487 6-60 (372)
10 KOG0712 Molecular chaperone (D 98.9 1.6E-09 3.5E-14 110.2 5.3 57 421-487 2-58 (337)
11 PRK14279 chaperone protein Dna 98.9 2E-09 4.4E-14 109.9 5.6 57 424-487 10-66 (392)
12 PRK14285 chaperone protein Dna 98.8 2.9E-09 6.2E-14 107.8 5.6 57 424-487 4-60 (365)
13 PRK14299 chaperone protein Dna 98.8 3.3E-09 7.3E-14 104.2 4.9 55 424-486 5-59 (291)
14 PRK14286 chaperone protein Dna 98.8 3.6E-09 7.8E-14 107.4 5.2 57 424-487 5-61 (372)
15 KOG0718 Molecular chaperone (D 98.8 3.7E-09 8E-14 111.6 5.2 63 420-486 6-68 (546)
16 PRK14295 chaperone protein Dna 98.8 4.7E-09 1E-13 107.2 5.6 57 424-487 10-66 (389)
17 PRK14282 chaperone protein Dna 98.8 4.7E-09 1E-13 106.1 5.3 58 424-487 5-62 (369)
18 PRK14278 chaperone protein Dna 98.8 6E-09 1.3E-13 106.0 5.8 56 424-487 4-59 (378)
19 PRK14287 chaperone protein Dna 98.8 5.5E-09 1.2E-13 106.0 5.2 55 425-487 6-60 (371)
20 PRK14277 chaperone protein Dna 98.8 5.6E-09 1.2E-13 106.3 5.2 57 424-487 6-62 (386)
21 PRK14283 chaperone protein Dna 98.8 6E-09 1.3E-13 105.7 5.4 56 424-487 6-61 (378)
22 PTZ00037 DnaJ_C chaperone prot 98.8 5.2E-09 1.1E-13 108.5 4.9 52 425-487 30-81 (421)
23 PRK10266 curved DNA-binding pr 98.8 6.4E-09 1.4E-13 102.7 5.1 55 424-486 5-59 (306)
24 PRK14294 chaperone protein Dna 98.8 6.9E-09 1.5E-13 104.9 5.3 57 424-487 5-61 (366)
25 PRK10767 chaperone protein Dna 98.8 7.4E-09 1.6E-13 104.5 5.4 57 424-487 5-61 (371)
26 PRK14284 chaperone protein Dna 98.8 7.2E-09 1.6E-13 105.7 5.3 56 425-487 3-58 (391)
27 PRK14276 chaperone protein Dna 98.8 6.4E-09 1.4E-13 105.7 4.9 56 424-487 5-60 (380)
28 PRK14280 chaperone protein Dna 98.7 8.2E-09 1.8E-13 104.8 5.1 56 424-487 5-60 (376)
29 PRK14297 chaperone protein Dna 98.7 8.8E-09 1.9E-13 104.6 5.2 57 424-487 5-61 (380)
30 PRK14291 chaperone protein Dna 98.7 8.7E-09 1.9E-13 104.8 5.1 55 425-487 5-59 (382)
31 PRK14281 chaperone protein Dna 98.7 1E-08 2.3E-13 104.8 5.7 57 424-487 4-60 (397)
32 PRK14301 chaperone protein Dna 98.7 1.1E-08 2.4E-13 103.9 5.5 57 424-487 5-61 (373)
33 PRK14298 chaperone protein Dna 98.7 9.7E-09 2.1E-13 104.6 5.0 56 424-487 6-61 (377)
34 PRK14290 chaperone protein Dna 98.7 1.5E-08 3.3E-13 102.4 5.2 58 424-487 4-61 (365)
35 PRK14300 chaperone protein Dna 98.7 2E-08 4.2E-13 102.0 5.4 56 424-487 4-59 (372)
36 KOG0717 Molecular chaperone (D 98.7 1.6E-08 3.6E-13 106.5 4.6 56 424-485 9-64 (508)
37 KOG0691 Molecular chaperone (D 98.6 2.6E-08 5.6E-13 100.0 5.0 56 425-487 7-62 (296)
38 PRK14293 chaperone protein Dna 98.6 3.5E-08 7.6E-13 100.1 5.5 56 424-487 4-59 (374)
39 PRK14292 chaperone protein Dna 98.6 3.4E-08 7.3E-13 99.8 5.2 55 425-487 4-58 (371)
40 COG2214 CbpA DnaJ-class molecu 98.6 5.4E-08 1.2E-12 84.5 5.6 57 425-487 8-64 (237)
41 KOG0719 Molecular chaperone (D 98.6 3.7E-08 8E-13 97.1 5.1 59 424-487 15-73 (264)
42 PRK14289 chaperone protein Dna 98.6 6.1E-08 1.3E-12 98.6 5.4 56 424-486 6-61 (386)
43 KOG0716 Molecular chaperone (D 98.6 6.5E-08 1.4E-12 96.5 5.0 55 425-486 33-87 (279)
44 KOG0715 Molecular chaperone (D 98.5 1.2E-07 2.5E-12 94.3 5.4 61 419-487 39-99 (288)
45 PHA03102 Small T antigen; Revi 98.5 1.1E-07 2.4E-12 87.6 4.9 50 427-487 9-60 (153)
46 PRK05014 hscB co-chaperone Hsc 98.5 2.7E-07 5.9E-12 85.4 6.5 59 426-486 4-64 (171)
47 PTZ00100 DnaJ chaperone protei 98.5 2E-07 4.4E-12 82.9 5.3 51 424-485 66-116 (116)
48 PTZ00341 Ring-infected erythro 98.4 3.2E-07 7E-12 103.7 5.3 56 424-487 574-629 (1136)
49 KOG0721 Molecular chaperone (D 98.4 4.3E-07 9.3E-12 88.6 5.2 57 424-487 100-156 (230)
50 PRK03578 hscB co-chaperone Hsc 98.3 9.5E-07 2.1E-11 82.5 6.5 61 424-486 7-69 (176)
51 PRK00294 hscB co-chaperone Hsc 98.3 1.5E-06 3.2E-11 81.2 6.7 60 425-486 6-67 (173)
52 PRK01356 hscB co-chaperone Hsc 98.3 1.2E-06 2.6E-11 81.1 6.0 56 426-485 5-62 (166)
53 KOG0720 Molecular chaperone (D 98.3 6.1E-07 1.3E-11 94.8 4.5 55 424-486 236-290 (490)
54 TIGR03835 termin_org_DnaJ term 98.1 3E-06 6.5E-11 94.3 5.6 54 425-486 4-57 (871)
55 TIGR00714 hscB Fe-S protein as 98.1 5.1E-06 1.1E-10 76.2 6.1 50 435-486 3-52 (157)
56 KOG0550 Molecular chaperone (D 98.1 5.1E-06 1.1E-10 87.6 5.7 77 404-486 351-430 (486)
57 COG5407 SEC63 Preprotein trans 98.0 4.8E-06 1E-10 88.6 5.2 85 397-486 73-159 (610)
58 PHA02624 large T antigen; Prov 98.0 6.2E-06 1.3E-10 90.2 5.2 50 426-486 14-65 (647)
59 KOG0714 Molecular chaperone (D 98.0 4E-06 8.6E-11 76.9 2.9 56 425-486 5-60 (306)
60 KOG1150 Predicted molecular ch 97.9 8.1E-06 1.8E-10 79.7 4.3 56 425-486 55-110 (250)
61 KOG0722 Molecular chaperone (D 97.8 7.9E-06 1.7E-10 82.1 2.3 69 411-487 15-89 (329)
62 KOG0624 dsRNA-activated protei 97.8 2E-05 4.3E-10 82.3 4.4 61 424-488 395-455 (504)
63 TIGR02349 DnaJ_bact chaperone 97.7 4.3E-05 9.4E-10 76.9 4.9 32 426-457 3-34 (354)
64 PRK01773 hscB co-chaperone Hsc 97.5 0.00024 5.2E-09 66.6 6.6 58 426-485 5-64 (173)
65 KOG1789 Endocytosis protein RM 97.1 0.00056 1.2E-08 78.9 5.8 41 436-486 1298-1338(2235)
66 COG1076 DjlA DnaJ-domain-conta 97.1 0.00037 8.1E-09 64.4 3.4 60 424-483 114-173 (174)
67 KOG0723 Molecular chaperone (D 96.6 0.0041 8.9E-08 55.8 5.6 50 427-487 60-109 (112)
68 COG5269 ZUO1 Ribosome-associat 95.7 0.019 4.1E-07 59.0 6.0 76 390-487 29-105 (379)
69 KOG0568 Molecular chaperone (D 88.5 0.71 1.5E-05 47.0 5.0 64 408-481 31-97 (342)
70 PF14687 DUF4460: Domain of un 81.3 4.3 9.3E-05 36.3 6.0 50 434-486 5-54 (112)
71 COG1076 DjlA DnaJ-domain-conta 69.1 8.7 0.00019 35.8 4.9 46 438-485 18-63 (174)
72 COG3795 Uncharacterized protei 66.5 4 8.7E-05 37.6 2.1 23 293-326 78-100 (123)
73 PF08628 Nexin_C: Sorting nexi 57.0 21 0.00045 30.8 4.7 72 405-478 36-110 (113)
74 KOG3192 Mitochondrial J-type c 46.6 35 0.00076 33.1 4.8 53 431-485 18-70 (168)
75 cd08815 Death_TNFRSF25_DR3 Dea 37.1 31 0.00067 29.7 2.6 32 388-419 36-67 (77)
76 COG2987 HutU Urocanate hydrata 36.4 39 0.00084 37.6 3.8 142 311-457 215-390 (561)
77 PF08081 RBM1CTR: RBM1CTR (NUC 33.9 18 0.00039 28.5 0.7 13 43-55 15-27 (45)
78 PF03656 Pam16: Pam16; InterP 33.6 58 0.0013 30.0 4.0 31 426-456 61-91 (127)
79 COG3483 TDO2 Tryptophan 2,3-di 30.4 69 0.0015 32.8 4.2 49 437-485 34-87 (262)
80 PF02655 ATP-grasp_3: ATP-gras 26.2 32 0.00069 31.1 1.0 9 296-304 149-157 (161)
81 PF11363 DUF3164: Protein of u 24.2 73 0.0016 31.1 3.1 30 388-417 99-128 (195)
82 PF14267 DUF4357: Domain of un 22.3 19 0.00041 28.7 -1.1 22 247-268 18-39 (55)
No 1
>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]
Probab=100.00 E-value=1.6e-41 Score=349.77 Aligned_cols=425 Identities=26% Similarity=0.317 Sum_probs=259.6
Q ss_pred CccccccccCcccccccCCCCCCCccccccccccccCCCCCcccccCCCCchhhhhhccCCccccccCCCCCCccccccc
Q 011238 1 MDESWRMRMGLGMQARKSMPEETPATATRHSFTSTALDPDDFSDVFGGPPRTLLARKFSADFSTTTSSSSSSNFYSEVFR 80 (490)
Q Consensus 1 mdeswr~~mg~~~pr~rs~~~~~~~~~~~~~~~~~~l~pddf~dvfggpprs~l~~~fs~~~~~~~~~~~s~~fy~e~f~ 80 (490)
+|..|+|.+|. . ++....-++ +.++-.....++.++++..+...+.+.+.++-.. .+.+...+.+..
T Consensus 1 ~~~~~~~~~~~-------~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~- 67 (453)
T KOG0431|consen 1 ADAKFRFAKGR-------S-EDESFSITR-SEMDDSTKNSDSREREGRSPQVELTRERAENEAE---FSFVQAKLLEER- 67 (453)
T ss_pred CCccccccccc-------c-ccceeeccc-cccCcccccccccccccccccccccccccccccc---cccccccccccc-
Confidence 57788888882 2 222222222 3335677888999999999999999999874331 123345555666
Q ss_pred CCCCCccc------cCCCCCCccceeeecCCCCCCcccccccCCC-Cc---ccccccCCCCCCCCCcccccCcCCCCC--
Q 011238 81 IPSPEFVF------PTRRAGRVLPAFRIPASRGEGFYSDVFASGD-GR---KSRERSQPKSKSNSSSVLSSEELSPLR-- 148 (490)
Q Consensus 81 ~~~~~~~~------~~~~~gr~lp~frip~~~~~gfy~difg~~~-~~---rsr~rs~~~sksnsss~~ssee~sp~r-- 148 (490)
+ ++... ....++.++++.+.|+. ...++..+|+... .+ -.+..+......++++-+..++...+.
T Consensus 68 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~s~~~~~~~~~~~~~~~ 144 (453)
T KOG0431|consen 68 P--PGQKGSGRSKNDLKSEDESERAKREKSG-TDATEGHAFVGNGADGKATVKRQDPETSAEQRSSSSLDHEAAAGHDST 144 (453)
T ss_pred C--cccCcccccccccccccccccccccCCC-cccccCccccccccccccCCCccCcccccccCCcccccccccccCccc
Confidence 5 33333 22255566899999998 8888998888642 22 223344455556666666666666653
Q ss_pred --CCCCCcchhhhccccccccccccccCCCCCCCCCCCCcCCCCCCCcccCCCCCcccccccccccccccccccccccce
Q 011238 149 --PPDGEDVALSSFTSKLRPINVPCRWNSTTMMPDDHPNRQGMPMPAFQCSRPSYNDDHHLKEDDANYNNFIRSSHYGFS 226 (490)
Q Consensus 149 --p~~g~d~alssf~sklrpi~vp~r~~ss~~~p~~~~~~~~~~~~~f~c~~~~~~~~~~~~~~~~~~~~~~~s~h~g~s 226 (490)
|...+.-.++++..+..+..+.....-.+.-... ...++. ....-+-+. ...+ ..+..+...|.+-
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~s~~~-----~~~~---~~~s~~~~~~~~~- 212 (453)
T KOG0431|consen 145 EEAAAADEKPRSSAEVREKEDKVSNTSSAVERAKPS-AKARGF--AQALGSQQQ-----ATAP---KADSFFNSTSRGA- 212 (453)
T ss_pred cccccccccccccccccccccccccccccccccCcc-cccccc--ccccccccc-----CCCc---cccccccccccCC-
Confidence 2356666667777777776666555211111110 000000 110000000 0011 1223445555554
Q ss_pred eecCCCcccccCCCcceeeeeecccccccCCCCcCcC-ccCCCC---CCCccc-ccccchhhh---hhhccccchhceee
Q 011238 227 RRVSSPETISVEPTSFRSIKVSVDDLELNSPSSPASS-LCQEPE---PKTSFM-QSGNAMQEQ---EVEQEEDEVMSSYV 298 (490)
Q Consensus 227 ~~~s~petis~~~~s~~~~k~s~~d~~~~~pss~~ss-~~~~p~---~k~~~~-~~~~~~~e~---~~~~~~devmssyv 298 (490)
.+...|++......+.....-. +......+.++. -|.+.+ .++..+ ....-..++ .-.....+.|.++.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~s~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (453)
T KOG0431|consen 213 SAPADPFADLDDLSSGSNASKS---GSSSDLSSRVSPGITETTDSPPSKTSSPPNQQKKSPPDFQAKPSSESPEASTQKR 289 (453)
T ss_pred CCCCCccccccchhhhcccCCC---CCcccccCCCCCCCCCCCCCchhhhcccccchhccchhhhcccCccchhhccccc
Confidence 5556677777766655554221 111111333333 233321 111111 101111111 11123347777777
Q ss_pred EEecCCc---cCCCccchhHHHHHHHHHHhhhccchhhhhhhhhhhhcccccC-CCCc--cccccccccCCccccCcccc
Q 011238 299 IEINSDY---REGTGEAVSIDEAIAWAKEKFQSQSSFTLAQQEKHELAADNEE-RPNA--NEFLDPQTAGHETLDSPMEE 372 (490)
Q Consensus 299 ieins~~---re~~~~a~~~deaiawakekf~s~~~~~~r~~~~~~~~~~~~~-~p~~--~ef~d~lld~hg~tqs~~~~ 372 (490)
+.++... |-+.... .++++ +.. +..+ +.|.+ ++...++..+...+
T Consensus 290 ~~~~~~~~~~~~~~~~~----------g~~~~------------------~~~~~~~~~~~~~~~-~~~~~~~~~~~d~k 340 (453)
T KOG0431|consen 290 PNYAQKRSDVPPGNTER----------GKRAE------------------SSSTRTKKQMDTFSD-LLNPQGFKSTSDEK 340 (453)
T ss_pred cchhccCCCCCcccccc----------ccccc------------------ccccccchhhhhhhh-hhccccccchhhhh
Confidence 7764432 2221100 11111 112 3333 35777 77777887777665
Q ss_pred CCCCChhhhhhcchhhhhhhHHHHHHHhhhcCCCccHHHHHHhcccccCCCCCCcccCCCCCCChhHHHHHHHHHHHhcC
Q 011238 373 KTNPTTEEGKEQSQDDIETELLDEEIRLWSAGKETNIRLLLSALHHVLWPNSGWCSVPLTSLIESSHVKKAYQKARLCLH 452 (490)
Q Consensus 373 ~~~~~~~~~kEq~eK~~l~D~Vd~KI~~Wa~GKe~NIRALLSSLh~VLW~es~WK~VGmsdLaTp~qVKKAYRKAiLkvH 452 (490)
.+.+.+++++ |..++.|.|+.+|+.|+.|||+||||||+|||+|||++|+|++|+|.+|||+++|||+||||||+||
T Consensus 341 ~~~~~ae~~~---e~~r~~e~~d~~I~~W~~GKE~NIRALLSTLh~VLW~es~WqpVsltDLVtp~~VKKaYrKA~L~VH 417 (453)
T KOG0431|consen 341 RPREIAEMRK---ELSRLMEPLDEEIRRWSEGKEGNIRALLSTLHYVLWPESGWQPVSLTDLVTPAQVKKAYRKAVLCVH 417 (453)
T ss_pred hHHHHHHHHH---HHHhhcchHHHHHHHhcccccccHHHHHHHHhHhhcCccCcccCchhhccCHHHHHHHHHhhhheeC
Confidence 5555555544 5578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhccC
Q 011238 453 PDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISEDV 488 (490)
Q Consensus 453 PDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdqe~ 488 (490)
|||++++|++.+|||||+.||.+|++||+.|..+++
T Consensus 418 PDKlqq~gas~~qK~Iaekvfd~l~eawn~f~~~~~ 453 (453)
T KOG0431|consen 418 PDKLQQKGASLEQKYIAEKVFDALSEAWNKFNQQED 453 (453)
T ss_pred cccccCCcccHHHHHHHHHHHHHHHHHHHhhhccCC
Confidence 999999999999999999999999999999998874
No 2
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=99.18 E-value=1.9e-11 Score=125.38 Aligned_cols=56 Identities=21% Similarity=0.315 Sum_probs=50.7
Q ss_pred CCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011238 425 GWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 487 (490)
Q Consensus 425 ~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdqe 487 (490)
-|+.|||...+++++||||||||++++|||+++. ...|+.+|++||+||++|++.+
T Consensus 6 yYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g-------~~~AeeKFKEI~eAYEVLsD~e 61 (371)
T COG0484 6 YYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPG-------DKEAEEKFKEINEAYEVLSDPE 61 (371)
T ss_pred hhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-------CHHHHHHHHHHHHHHHHhCCHH
Confidence 4899999999999999999999999999999973 1269999999999999998864
No 3
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=99.12 E-value=8.4e-11 Score=114.92 Aligned_cols=63 Identities=21% Similarity=0.308 Sum_probs=59.2
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhc
Q 011238 424 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISE 486 (490)
Q Consensus 424 s~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdq 486 (490)
..|+.||+.+.+++++||++|||+++++||||+..+|.+++.+..|+..|++|++||++|++.
T Consensus 201 ~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~~ 263 (267)
T PRK09430 201 DAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKKQ 263 (267)
T ss_pred hHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHh
Confidence 468999999999999999999999999999999888888888889999999999999999875
No 4
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.09 E-value=8.1e-11 Score=119.36 Aligned_cols=58 Identities=22% Similarity=0.322 Sum_probs=52.5
Q ss_pred CCCCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011238 423 NSGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 487 (490)
Q Consensus 423 es~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdqe 487 (490)
..-|+.|||...++..+||+||||++|++||||++. .+ -|...|++||.||++|++.+
T Consensus 16 rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpd--dp-----~A~e~F~~in~AYEVLsDpe 73 (336)
T KOG0713|consen 16 RDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPD--DP-----NANEKFKEINAAYEVLSDPE 73 (336)
T ss_pred CCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--CH-----HHHHHHHHHHHHHHHhcCHH
Confidence 456999999999999999999999999999999984 22 58999999999999999876
No 5
>smart00271 DnaJ DnaJ molecular chaperone homology domain.
Probab=99.08 E-value=2.2e-10 Score=85.95 Aligned_cols=56 Identities=27% Similarity=0.327 Sum_probs=49.9
Q ss_pred CCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhc
Q 011238 425 GWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISE 486 (490)
Q Consensus 425 ~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdq 486 (490)
.|+.|||...++..+||++|+++++.+||||.... ...++..|..|++||++|++.
T Consensus 3 ~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~------~~~~~~~~~~l~~Ay~~L~~~ 58 (60)
T smart00271 3 YYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGD------KEEAEEKFKEINEAYEVLSDP 58 (60)
T ss_pred HHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc------hHHHHHHHHHHHHHHHHHcCC
Confidence 47899999999999999999999999999998631 347889999999999999875
No 6
>cd06257 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Probab=99.07 E-value=2.7e-10 Score=83.90 Aligned_cols=54 Identities=26% Similarity=0.348 Sum_probs=48.1
Q ss_pred CCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhh
Q 011238 425 GWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFIS 485 (490)
Q Consensus 425 ~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkd 485 (490)
-|+.+|+...++..+||++||++++++||||..+. ..+...|..|++||++|++
T Consensus 2 ~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~-------~~~~~~~~~l~~Ay~~L~d 55 (55)
T cd06257 2 YYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDD-------PEAEEKFKEINEAYEVLSD 55 (55)
T ss_pred hHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-------HHHHHHHHHHHHHHHHhcC
Confidence 37889999999999999999999999999998631 4788999999999999874
No 7
>PRK14288 chaperone protein DnaJ; Provisional
Probab=99.00 E-value=3.5e-10 Score=114.54 Aligned_cols=57 Identities=25% Similarity=0.383 Sum_probs=49.9
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011238 424 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 487 (490)
Q Consensus 424 s~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdqe 487 (490)
.-|+.|||...+++++|||||||+++++||||++.. ..|+..|++|++||++|.+.+
T Consensus 4 dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~-------~~a~~~f~~i~~AYevLsd~~ 60 (369)
T PRK14288 4 SYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGD-------KEAEEKFKLINEAYGVLSDEK 60 (369)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc-------cHHHHHHHHHHHHHHHhccHH
Confidence 358999999999999999999999999999998631 137889999999999998754
No 8
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....
Probab=98.97 E-value=9.2e-10 Score=84.16 Aligned_cols=55 Identities=24% Similarity=0.339 Sum_probs=49.1
Q ss_pred CcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhc
Q 011238 426 WCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISE 486 (490)
Q Consensus 426 WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdq 486 (490)
|+.|||...++.++||++|+++++.+||||+.+. . ..|+..|..|++||++|++.
T Consensus 3 y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~---~---~~~~~~~~~i~~Ay~~L~~~ 57 (64)
T PF00226_consen 3 YEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGD---E---AEAEEKFARINEAYEILSDP 57 (64)
T ss_dssp HHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTST---H---HHHHHHHHHHHHHHHHHHSH
T ss_pred HHHCCCCCCCCHHHHHHHHHhhhhccccccchhh---h---hhhhHHHHHHHHHHHHhCCH
Confidence 6789999999999999999999999999998742 1 46889999999999999865
No 9
>PRK14296 chaperone protein DnaJ; Provisional
Probab=98.91 E-value=1.1e-09 Score=111.34 Aligned_cols=55 Identities=16% Similarity=0.268 Sum_probs=49.1
Q ss_pred CCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011238 425 GWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 487 (490)
Q Consensus 425 ~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdqe 487 (490)
-|+.|||...+++++|||||||+++++||||++. . -|+..|++|++||++|++.+
T Consensus 6 yY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~~--~------~a~~~F~~i~~AyevLsD~~ 60 (372)
T PRK14296 6 YYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKS--P------DAHDKMVEINEAADVLLDKD 60 (372)
T ss_pred HHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--c------hHHHHHHHHHHHHHHhcCHH
Confidence 4889999999999999999999999999999752 1 37889999999999998764
No 10
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.88 E-value=1.6e-09 Score=110.21 Aligned_cols=57 Identities=23% Similarity=0.317 Sum_probs=50.3
Q ss_pred CCCCCCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011238 421 WPNSGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 487 (490)
Q Consensus 421 W~es~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdqe 487 (490)
|+-.-|..|+|...+++++|||||||+++++||||++. |..+|++|++||++|++.+
T Consensus 2 ~~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~----------~~ekfkei~~AyevLsd~e 58 (337)
T KOG0712|consen 2 KNTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD----------AGEKFKEISQAYEVLSDPE 58 (337)
T ss_pred cccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc----------HHHHHHHHHHHHHHhcCHH
Confidence 33445789999999999999999999999999999873 7789999999999999843
No 11
>PRK14279 chaperone protein DnaJ; Provisional
Probab=98.87 E-value=2e-09 Score=109.92 Aligned_cols=57 Identities=25% Similarity=0.297 Sum_probs=50.1
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011238 424 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 487 (490)
Q Consensus 424 s~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdqe 487 (490)
.-|+.|+|...++.++|||||||+++++||||++. . ..|+..|++|++||++|.+.+
T Consensus 10 Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~--~-----~~a~~~f~~i~~Ay~vLsD~~ 66 (392)
T PRK14279 10 DFYKELGVSSDASAEEIKKAYRKLARELHPDANPG--D-----PAAEERFKAVSEAHDVLSDPA 66 (392)
T ss_pred CHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--C-----hHHHHHHHHHHHHHHHhcchh
Confidence 34899999999999999999999999999999853 1 147889999999999999864
No 12
>PRK14285 chaperone protein DnaJ; Provisional
Probab=98.85 E-value=2.9e-09 Score=107.83 Aligned_cols=57 Identities=26% Similarity=0.410 Sum_probs=49.9
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011238 424 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 487 (490)
Q Consensus 424 s~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdqe 487 (490)
.-|+.|+|...++.++||+||||+++++||||++.. ..|+..|++|++||++|.+.+
T Consensus 4 d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~-------~~a~~~f~~i~~Ay~vL~d~~ 60 (365)
T PRK14285 4 DYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGN-------KEAESIFKEATEAYEVLIDDN 60 (365)
T ss_pred CHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC-------HHHHHHHHHHHHHHHHHcCcc
Confidence 358899999999999999999999999999997531 137889999999999999864
No 13
>PRK14299 chaperone protein DnaJ; Provisional
Probab=98.82 E-value=3.3e-09 Score=104.15 Aligned_cols=55 Identities=20% Similarity=0.306 Sum_probs=48.5
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhc
Q 011238 424 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISE 486 (490)
Q Consensus 424 s~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdq 486 (490)
.-|+.|||...+++++|||||||+++++||||++.. -|+..|++||+||++|++.
T Consensus 5 d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~--------~~~~~f~~i~~Ay~~L~d~ 59 (291)
T PRK14299 5 DYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSP--------GAEEKFKEINEAYTVLSDP 59 (291)
T ss_pred CHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh--------hHHHHHHHHHHHHHHhcCH
Confidence 358899999999999999999999999999997521 3778899999999999874
No 14
>PRK14286 chaperone protein DnaJ; Provisional
Probab=98.82 E-value=3.6e-09 Score=107.37 Aligned_cols=57 Identities=21% Similarity=0.304 Sum_probs=49.6
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011238 424 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 487 (490)
Q Consensus 424 s~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdqe 487 (490)
.-|+.|+|...++.++||+||||+++++||||++.. ..|++.|++|++||++|++..
T Consensus 5 d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~-------~~a~~~f~~i~~Ay~vL~d~~ 61 (372)
T PRK14286 5 SYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGN-------KESEEKFKEATEAYEILRDPK 61 (372)
T ss_pred CHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-------hHHHHHHHHHHHHHHHhccHH
Confidence 358899999999999999999999999999998531 147889999999999998753
No 15
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.81 E-value=3.7e-09 Score=111.57 Aligned_cols=63 Identities=27% Similarity=0.337 Sum_probs=56.3
Q ss_pred cCCCCCCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhc
Q 011238 420 LWPNSGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISE 486 (490)
Q Consensus 420 LW~es~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdq 486 (490)
+|+..-|..|++...+|++|||+||||+|+.+||||+. ++++|..|+++|..|++|||+|.+.
T Consensus 6 ~~e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~----dpd~K~~AE~~F~~i~~AyEVLsDp 68 (546)
T KOG0718|consen 6 LDEIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHT----DPDQKKAAEEKFQRIQRAYEVLSDP 68 (546)
T ss_pred cchhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccC----ChhHHHHHHHHHHHHHHHHHHhcCh
Confidence 45545678899999999999999999999999999985 3689999999999999999999763
No 16
>PRK14295 chaperone protein DnaJ; Provisional
Probab=98.80 E-value=4.7e-09 Score=107.21 Aligned_cols=57 Identities=23% Similarity=0.308 Sum_probs=50.1
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011238 424 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 487 (490)
Q Consensus 424 s~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdqe 487 (490)
.-|+.|+|...++..+|||||||+++++||||++.. ..|+..|++|++||++|++..
T Consensus 10 d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~-------~~a~~~f~~i~~Ay~vL~d~~ 66 (389)
T PRK14295 10 DYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGD-------AKAEERFKEISEAYDVLSDEK 66 (389)
T ss_pred CHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCc-------hhHHHHHHHHHHHHHHHCchh
Confidence 468999999999999999999999999999998531 147889999999999998753
No 17
>PRK14282 chaperone protein DnaJ; Provisional
Probab=98.80 E-value=4.7e-09 Score=106.14 Aligned_cols=58 Identities=19% Similarity=0.330 Sum_probs=50.4
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011238 424 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 487 (490)
Q Consensus 424 s~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdqe 487 (490)
.-|+.|+|...++.++||+||||+++++||||++.. +..|+..|++|++||++|++.+
T Consensus 5 d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~------~~~a~~~f~~i~~Ay~vL~d~~ 62 (369)
T PRK14282 5 DYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPEN------RKEAEQKFKEIQEAYEVLSDPQ 62 (369)
T ss_pred ChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccc------hhHHHHHHHHHHHHHHHhcChh
Confidence 358999999999999999999999999999998531 1248899999999999998764
No 18
>PRK14278 chaperone protein DnaJ; Provisional
Probab=98.79 E-value=6e-09 Score=105.99 Aligned_cols=56 Identities=20% Similarity=0.284 Sum_probs=49.4
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011238 424 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 487 (490)
Q Consensus 424 s~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdqe 487 (490)
.-|+.|+|...++.++||+||||+++++||||++. ..|+..|++|++||++|.+.+
T Consensus 4 d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~~--------~~a~~~f~~i~~Ay~vL~d~~ 59 (378)
T PRK14278 4 DYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPD--------EEAQEKFKEISVAYEVLSDPE 59 (378)
T ss_pred CcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCCc--------HHHHHHHHHHHHHHHHhchhh
Confidence 35899999999999999999999999999999752 147889999999999998754
No 19
>PRK14287 chaperone protein DnaJ; Provisional
Probab=98.78 E-value=5.5e-09 Score=105.99 Aligned_cols=55 Identities=24% Similarity=0.299 Sum_probs=48.6
Q ss_pred CCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011238 425 GWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 487 (490)
Q Consensus 425 ~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdqe 487 (490)
-|+.|||...++.++|||||||+++++||||++. . -|+..|++||+||++|++.+
T Consensus 6 ~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~--~------~~~~~f~~i~~Ay~~L~d~~ 60 (371)
T PRK14287 6 YYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKA--P------DAEDKFKEVKEAYDTLSDPQ 60 (371)
T ss_pred HHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--h------hHHHHHHHHHHHHHHhCcHh
Confidence 4889999999999999999999999999999752 1 37789999999999998754
No 20
>PRK14277 chaperone protein DnaJ; Provisional
Probab=98.78 E-value=5.6e-09 Score=106.35 Aligned_cols=57 Identities=19% Similarity=0.257 Sum_probs=49.8
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011238 424 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 487 (490)
Q Consensus 424 s~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdqe 487 (490)
.-|+.|+|...++.++||+||||+++++||||++.. ..|+..|++|++||++|++..
T Consensus 6 d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~-------~~a~~~f~~i~~Ay~vL~d~~ 62 (386)
T PRK14277 6 DYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGD-------KEAEQKFKEINEAYEILSDPQ 62 (386)
T ss_pred CHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCc-------hHHHHHHHHHHHHHHHhCCHH
Confidence 458999999999999999999999999999998631 147889999999999998753
No 21
>PRK14283 chaperone protein DnaJ; Provisional
Probab=98.78 E-value=6e-09 Score=105.73 Aligned_cols=56 Identities=21% Similarity=0.360 Sum_probs=49.7
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011238 424 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 487 (490)
Q Consensus 424 s~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdqe 487 (490)
.-|+.|||...++.++|||||||+++++||||++. . -|+..|++|++||++|++..
T Consensus 6 d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~--~------~a~~~f~~i~~Ay~~Lsd~~ 61 (378)
T PRK14283 6 DYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE--E------GAEEKFKEISEAYAVLSDDE 61 (378)
T ss_pred ChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--c------cHHHHHHHHHHHHHHhchhH
Confidence 45899999999999999999999999999999752 1 47889999999999998754
No 22
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=98.77 E-value=5.2e-09 Score=108.45 Aligned_cols=52 Identities=25% Similarity=0.356 Sum_probs=46.2
Q ss_pred CCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011238 425 GWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 487 (490)
Q Consensus 425 ~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdqe 487 (490)
-|+.|||...+++++|||||||+++++||||+.. +.+|++|++||++|.+.+
T Consensus 30 ~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~-----------~e~F~~i~~AYevLsD~~ 81 (421)
T PTZ00037 30 LYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD-----------PEKFKEISRAYEVLSDPE 81 (421)
T ss_pred HHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCch-----------HHHHHHHHHHHHHhccHH
Confidence 4899999999999999999999999999999631 257999999999998754
No 23
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=98.77 E-value=6.4e-09 Score=102.67 Aligned_cols=55 Identities=22% Similarity=0.360 Sum_probs=48.7
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhc
Q 011238 424 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISE 486 (490)
Q Consensus 424 s~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdq 486 (490)
..|+.|||...++.++|||||||+++++||||+... .|+.+|++|++||++|++.
T Consensus 5 d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~~--------~~~~~f~~i~~Ay~~L~~~ 59 (306)
T PRK10266 5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEP--------DAEARFKEVAEAWEVLSDE 59 (306)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc--------cHHHHHHHHHHHHHHhhhH
Confidence 358899999999999999999999999999996421 4788999999999999874
No 24
>PRK14294 chaperone protein DnaJ; Provisional
Probab=98.77 E-value=6.9e-09 Score=104.87 Aligned_cols=57 Identities=21% Similarity=0.312 Sum_probs=49.5
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011238 424 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 487 (490)
Q Consensus 424 s~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdqe 487 (490)
.-|+.|+|...++.++||+||||+++++||||++.. ..|+..|++|++||++|++..
T Consensus 5 d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~-------~~~~~~f~~~~~Ay~vL~d~~ 61 (366)
T PRK14294 5 DYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGD-------KEAEELFKEAAEAYEVLSDPK 61 (366)
T ss_pred ChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc-------hHHHHHHHHHHHHHHHhccHH
Confidence 358899999999999999999999999999998631 147888999999999998753
No 25
>PRK10767 chaperone protein DnaJ; Provisional
Probab=98.76 E-value=7.4e-09 Score=104.53 Aligned_cols=57 Identities=21% Similarity=0.341 Sum_probs=49.7
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011238 424 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 487 (490)
Q Consensus 424 s~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdqe 487 (490)
.-|+.|+|...++.++||+||||+++++||||++. . ..|+..|++|++||++|++..
T Consensus 5 d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~--~-----~~a~~~f~~i~~Ay~~L~d~~ 61 (371)
T PRK10767 5 DYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPG--D-----KEAEEKFKEIKEAYEVLSDPQ 61 (371)
T ss_pred ChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCC--c-----HHHHHHHHHHHHHHHHhcchh
Confidence 35899999999999999999999999999999752 1 137889999999999998754
No 26
>PRK14284 chaperone protein DnaJ; Provisional
Probab=98.76 E-value=7.2e-09 Score=105.69 Aligned_cols=56 Identities=25% Similarity=0.361 Sum_probs=49.3
Q ss_pred CCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011238 425 GWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 487 (490)
Q Consensus 425 ~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdqe 487 (490)
-|+.|+|...+++++|||||||+++++||||++.. ..|+..|++|++||++|++.+
T Consensus 3 ~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~-------~~a~~~f~~i~~Ay~vL~d~~ 58 (391)
T PRK14284 3 YYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGD-------AEAEKRFKEVSEAYEVLSDAQ 58 (391)
T ss_pred HHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-------hHHHHHHHHHHHHHHHhcCHH
Confidence 47899999999999999999999999999998631 147889999999999998753
No 27
>PRK14276 chaperone protein DnaJ; Provisional
Probab=98.76 E-value=6.4e-09 Score=105.72 Aligned_cols=56 Identities=21% Similarity=0.309 Sum_probs=49.3
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011238 424 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 487 (490)
Q Consensus 424 s~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdqe 487 (490)
.-|+.|||...++.++||+||||+++++||||++.. -|+..|++|++||++|.+.+
T Consensus 5 d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~--------~a~~~f~~i~~Ay~vL~d~~ 60 (380)
T PRK14276 5 EYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEP--------GAEEKYKEVQEAYETLSDPQ 60 (380)
T ss_pred CHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc--------CHHHHHHHHHHHHHHhcCHh
Confidence 358899999999999999999999999999998631 36778999999999998754
No 28
>PRK14280 chaperone protein DnaJ; Provisional
Probab=98.74 E-value=8.2e-09 Score=104.81 Aligned_cols=56 Identities=20% Similarity=0.339 Sum_probs=49.3
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011238 424 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 487 (490)
Q Consensus 424 s~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdqe 487 (490)
.-|+.|||...++.++||+||||+++++||||++.. .|+..|++|++||++|++..
T Consensus 5 ~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~~--------~a~~~f~~i~~Ay~vL~d~~ 60 (376)
T PRK14280 5 DYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEE--------GADEKFKEISEAYEVLSDDQ 60 (376)
T ss_pred ChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc--------cHHHHHHHHHHHHHHhccHh
Confidence 358999999999999999999999999999997631 37789999999999998754
No 29
>PRK14297 chaperone protein DnaJ; Provisional
Probab=98.74 E-value=8.8e-09 Score=104.59 Aligned_cols=57 Identities=23% Similarity=0.336 Sum_probs=50.0
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011238 424 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 487 (490)
Q Consensus 424 s~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdqe 487 (490)
.-|+.|+|...++.++||+||||+++++||||++.. ..|+.+|++|++||++|++..
T Consensus 5 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~-------~~a~~~f~~i~~Ay~vL~d~~ 61 (380)
T PRK14297 5 DYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGN-------KEAEEKFKEINEAYQVLSDPQ 61 (380)
T ss_pred ChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-------HHHHHHHHHHHHHHHHhcCHh
Confidence 358899999999999999999999999999998631 147889999999999998753
No 30
>PRK14291 chaperone protein DnaJ; Provisional
Probab=98.74 E-value=8.7e-09 Score=104.82 Aligned_cols=55 Identities=20% Similarity=0.308 Sum_probs=48.8
Q ss_pred CCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011238 425 GWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 487 (490)
Q Consensus 425 ~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdqe 487 (490)
-|+.|+|...++.++||+||||+++++||||++.. -|+..|++|++||++|++..
T Consensus 5 ~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~--------~~~~~f~~i~~Ay~vLsd~~ 59 (382)
T PRK14291 5 YYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNP--------EAEEKFKEINEAYQVLSDPE 59 (382)
T ss_pred HHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc--------cHHHHHHHHHHHHHHhcCHH
Confidence 48899999999999999999999999999998631 36788999999999998753
No 31
>PRK14281 chaperone protein DnaJ; Provisional
Probab=98.74 E-value=1e-08 Score=104.84 Aligned_cols=57 Identities=26% Similarity=0.416 Sum_probs=49.6
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011238 424 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 487 (490)
Q Consensus 424 s~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdqe 487 (490)
.-|+.|+|...++..+|||||||+++++||||++.. ..|+..|++||+||++|++..
T Consensus 4 d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~-------~~a~~~f~~i~~Ay~vL~d~~ 60 (397)
T PRK14281 4 DYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDN-------KEAEEHFKEVNEAYEVLSNDD 60 (397)
T ss_pred ChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCc-------hHHHHHHHHHHHHHHHhhhhh
Confidence 358899999999999999999999999999998531 147789999999999998753
No 32
>PRK14301 chaperone protein DnaJ; Provisional
Probab=98.73 E-value=1.1e-08 Score=103.95 Aligned_cols=57 Identities=23% Similarity=0.332 Sum_probs=49.5
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011238 424 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 487 (490)
Q Consensus 424 s~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdqe 487 (490)
.-|+.|+|...++.++||+||||+++++||||++.. ..|+..|++|++||++|++..
T Consensus 5 ~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~-------~~a~~~f~~i~~Ay~vL~d~~ 61 (373)
T PRK14301 5 DYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDN-------PEAEQKFKEAAEAYEVLRDAE 61 (373)
T ss_pred ChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCC-------hHHHHHHHHHHHHHHHhcchh
Confidence 358899999999999999999999999999998631 137788999999999998753
No 33
>PRK14298 chaperone protein DnaJ; Provisional
Probab=98.73 E-value=9.7e-09 Score=104.57 Aligned_cols=56 Identities=25% Similarity=0.386 Sum_probs=49.2
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011238 424 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 487 (490)
Q Consensus 424 s~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdqe 487 (490)
.-|+.|+|...++.++|||||||+++++||||++.. -|+..|++||+||++|++..
T Consensus 6 d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~--------~~~~~f~~i~~Ay~vL~d~~ 61 (377)
T PRK14298 6 DYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEP--------DAEEKFKEISEAYAVLSDAE 61 (377)
T ss_pred CHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccCCh--------hHHHHHHHHHHHHHHhcchH
Confidence 358899999999999999999999999999997521 36789999999999998754
No 34
>PRK14290 chaperone protein DnaJ; Provisional
Probab=98.70 E-value=1.5e-08 Score=102.41 Aligned_cols=58 Identities=19% Similarity=0.255 Sum_probs=50.5
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011238 424 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 487 (490)
Q Consensus 424 s~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdqe 487 (490)
.-|+.|+|...++.++||+||||+++++||||++.. ...|+.+|++|++||++|++..
T Consensus 4 d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~------~~~a~~~f~~i~~Ay~~L~d~~ 61 (365)
T PRK14290 4 DYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGN------KAEAEEKFKEISEAYEVLSDPQ 61 (365)
T ss_pred ChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc------hhHHHHHHHHHHHHHHHhcChh
Confidence 458999999999999999999999999999997521 1258899999999999998854
No 35
>PRK14300 chaperone protein DnaJ; Provisional
Probab=98.68 E-value=2e-08 Score=101.96 Aligned_cols=56 Identities=25% Similarity=0.334 Sum_probs=49.2
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011238 424 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 487 (490)
Q Consensus 424 s~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdqe 487 (490)
.-|+.|||...++.++||+||||+++++||||++. . .|+..|++|++||++|++..
T Consensus 4 ~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~--~------~~~~~f~~i~~Ay~~L~d~~ 59 (372)
T PRK14300 4 DYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDA--K------DAEKKFKEINAAYDVLKDEQ 59 (372)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--c------CHHHHHHHHHHHHHHhhhHh
Confidence 45899999999999999999999999999999752 1 36778999999999998754
No 36
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.67 E-value=1.6e-08 Score=106.48 Aligned_cols=56 Identities=23% Similarity=0.337 Sum_probs=50.1
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhh
Q 011238 424 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFIS 485 (490)
Q Consensus 424 s~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkd 485 (490)
|.|..|||...+++.+||++|||++|++||||++. .. ..|+.+|+.|+.||++|++
T Consensus 9 c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd---~i---eeat~~F~~i~aAYeVLSd 64 (508)
T KOG0717|consen 9 CYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPD---RI---EEATQQFQLIQAAYEVLSD 64 (508)
T ss_pred HHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCc---cH---HHHHHHHHHHHHHHHHhcC
Confidence 56899999999999999999999999999999763 22 3589999999999999976
No 37
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.64 E-value=2.6e-08 Score=99.99 Aligned_cols=56 Identities=27% Similarity=0.389 Sum_probs=49.9
Q ss_pred CCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011238 425 GWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 487 (490)
Q Consensus 425 ~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdqe 487 (490)
-|..|||...+++++||||||+.+|.+||||++. .| -|...|+.|.+||++|.+.+
T Consensus 7 yY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~--dP-----~A~ekFq~L~eAy~VL~D~~ 62 (296)
T KOG0691|consen 7 YYDLLGISEDATDAEIKKAYRKKALQYHPDKNPG--DP-----QAAEKFQELSEAYEVLSDEE 62 (296)
T ss_pred HHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCC--Ch-----HHHHHHHHHHHHHHHhcCHH
Confidence 4778999999999999999999999999999984 32 28899999999999998764
No 38
>PRK14293 chaperone protein DnaJ; Provisional
Probab=98.62 E-value=3.5e-08 Score=100.07 Aligned_cols=56 Identities=18% Similarity=0.290 Sum_probs=49.3
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011238 424 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 487 (490)
Q Consensus 424 s~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdqe 487 (490)
.-|+.|+|...++.++||+||||+++++|||+++.. .|+..|+.|++||++|++..
T Consensus 4 d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~--------~a~~~f~~i~~Ay~vL~~~~ 59 (374)
T PRK14293 4 DYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEP--------GAEDRFKEINRAYEVLSDPE 59 (374)
T ss_pred ChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc--------CHHHHHHHHHHHHHHHhchH
Confidence 458999999999999999999999999999997631 36778999999999998754
No 39
>PRK14292 chaperone protein DnaJ; Provisional
Probab=98.62 E-value=3.4e-08 Score=99.84 Aligned_cols=55 Identities=20% Similarity=0.398 Sum_probs=48.7
Q ss_pred CCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011238 425 GWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 487 (490)
Q Consensus 425 ~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdqe 487 (490)
-|+.|||...++.++||+||||+++++||||+... .|+..|..||+||++|.+..
T Consensus 4 ~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~~~--------~a~~~~~~i~~Ay~vL~d~~ 58 (371)
T PRK14292 4 YYELLGVSRTASADEIKSAYRKLALKYHPDRNKEK--------GAAEKFAQINEAYAVLSDAE 58 (371)
T ss_pred hHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCh--------hHHHHHHHHHHHHHHhcchh
Confidence 47899999999999999999999999999998521 47788999999999998753
No 40
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=98.62 E-value=5.4e-08 Score=84.55 Aligned_cols=57 Identities=25% Similarity=0.375 Sum_probs=49.6
Q ss_pred CCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011238 425 GWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 487 (490)
Q Consensus 425 ~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdqe 487 (490)
.|..|||...++..+||+||||+++++|||+++. . .. .|+..|..|++||+++++..
T Consensus 8 ~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~--~-~~---~a~~~f~~i~~Ay~vLsd~~ 64 (237)
T COG2214 8 YYEILGVPPNASLEEIKKAYRKLALKYHPDRNPG--D-PK---VAEEKFKEINEAYEILSDPE 64 (237)
T ss_pred HHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--c-hh---HHHHHHHHHHHHHHHhhCHH
Confidence 4788999999999999999999999999999874 2 11 68899999999999998643
No 41
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.61 E-value=3.7e-08 Score=97.07 Aligned_cols=59 Identities=29% Similarity=0.406 Sum_probs=54.1
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011238 424 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 487 (490)
Q Consensus 424 s~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdqe 487 (490)
+-|+.|||...+++.+|+|||+|+.|.+||||++ .|++..|...|+.|+.||.+|.+++
T Consensus 15 d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~-----eed~~ea~~kFq~l~k~y~iLsDee 73 (264)
T KOG0719|consen 15 DLYEVLGVERDATDKEIRKAYHKLALRLHPDKNH-----EEDKVEATEKFQQLQKAYQILSDEE 73 (264)
T ss_pred CHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcch-----hhhHHHHHHHHHHHHHHHHHhhHHH
Confidence 4588999999999999999999999999999985 5788889999999999999997764
No 42
>PRK14289 chaperone protein DnaJ; Provisional
Probab=98.57 E-value=6.1e-08 Score=98.57 Aligned_cols=56 Identities=23% Similarity=0.323 Sum_probs=49.2
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhc
Q 011238 424 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISE 486 (490)
Q Consensus 424 s~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdq 486 (490)
.-|+.|+|...++.++||+||||+++++||||++.. ..|+..|++|++||++|.+.
T Consensus 6 ~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~-------~~a~~~f~~i~~Ay~~L~d~ 61 (386)
T PRK14289 6 DYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGD-------KEAEEKFKEAAEAYDVLSDP 61 (386)
T ss_pred CHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC-------hHHHHHHHHHHHHHHHhcCH
Confidence 458899999999999999999999999999998631 13788999999999999875
No 43
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.56 E-value=6.5e-08 Score=96.49 Aligned_cols=55 Identities=25% Similarity=0.343 Sum_probs=47.8
Q ss_pred CCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhc
Q 011238 425 GWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISE 486 (490)
Q Consensus 425 ~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdq 486 (490)
-|..||+...+|.++|||+||++++++||||... + | .+..+|++||+||++|++.
T Consensus 33 LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd-~-P-----~~~dkf~eIN~Ay~ILsD~ 87 (279)
T KOG0716|consen 33 LYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGD-N-P-----EATDKFKEINTAYAILSDP 87 (279)
T ss_pred HHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCC-C-c-----hhHHHHHHHHHHHHHhcCh
Confidence 4678899999999999999999999999999863 2 2 3667899999999999875
No 44
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.51 E-value=1.2e-07 Score=94.31 Aligned_cols=61 Identities=20% Similarity=0.309 Sum_probs=54.8
Q ss_pred ccCCCCCCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011238 419 VLWPNSGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 487 (490)
Q Consensus 419 VLW~es~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdqe 487 (490)
++|....|+.|||...++..+||+||++++.++|||-+... .|+.+|++|.+|||+|.+++
T Consensus 39 ~~~~~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~~--------~a~~kF~eI~~AYEiLsd~e 99 (288)
T KOG0715|consen 39 IISKEDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKDK--------EASKKFKEISEAYEILSDEE 99 (288)
T ss_pred cCCCcchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCc--------chhhHHHHHHHHHHHhcCHH
Confidence 45666789999999999999999999999999999998742 68999999999999998765
No 45
>PHA03102 Small T antigen; Reviewed
Probab=98.51 E-value=1.1e-07 Score=87.64 Aligned_cols=50 Identities=24% Similarity=0.274 Sum_probs=41.5
Q ss_pred cccCCCCCC--ChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011238 427 CSVPLTSLI--ESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 487 (490)
Q Consensus 427 K~VGmsdLa--Tp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdqe 487 (490)
+.|||...+ +..+||+|||++++++||||.. + +..|++||+||++|++..
T Consensus 9 ~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg----~-------~e~~k~in~Ay~~L~d~~ 60 (153)
T PHA03102 9 DLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGG----D-------EEKMKELNTLYKKFRESV 60 (153)
T ss_pred HHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCc----h-------hHHHHHHHHHHHHHhhHH
Confidence 356688888 9999999999999999999942 2 246899999999998754
No 46
>PRK05014 hscB co-chaperone HscB; Provisional
Probab=98.47 E-value=2.7e-07 Score=85.41 Aligned_cols=59 Identities=20% Similarity=0.390 Sum_probs=50.0
Q ss_pred CcccCCCCC--CChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhc
Q 011238 426 WCSVPLTSL--IESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISE 486 (490)
Q Consensus 426 WK~VGmsdL--aTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdq 486 (490)
|+.+||... ++..+||++||+++.++||||... .+...+.+|...|..||+||++|++-
T Consensus 4 f~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~--~~~~~~~~a~~~s~~iN~AY~~L~dp 64 (171)
T PRK05014 4 FTLFGLPARYDIDTQLLASRYQELQRQFHPDKFAN--ASERERLLAVQQAATINDAYQTLKHP 64 (171)
T ss_pred HHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCC--CcHHHHHHHHHHHHHHHHHHHHHCCh
Confidence 567788874 788999999999999999999864 44556678999999999999999864
No 47
>PTZ00100 DnaJ chaperone protein; Provisional
Probab=98.47 E-value=2e-07 Score=82.87 Aligned_cols=51 Identities=16% Similarity=0.275 Sum_probs=43.6
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhh
Q 011238 424 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFIS 485 (490)
Q Consensus 424 s~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkd 485 (490)
..|+.||+...++.++||++||++++++||||. | +. .+|.+||+||++|.+
T Consensus 66 eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkg---G-s~-------~~~~kIneAyevL~k 116 (116)
T PTZ00100 66 EAYKILNISPTASKERIREAHKQLMLRNHPDNG---G-ST-------YIASKVNEAKDLLLK 116 (116)
T ss_pred HHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCC---C-CH-------HHHHHHHHHHHHHhC
Confidence 468999999999999999999999999999983 3 22 357899999999853
No 48
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional
Probab=98.37 E-value=3.2e-07 Score=103.73 Aligned_cols=56 Identities=13% Similarity=0.069 Sum_probs=49.5
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011238 424 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 487 (490)
Q Consensus 424 s~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdqe 487 (490)
.-|..|||...++..+|||||||+++++||||++. . .|...|+.|++||++|.+..
T Consensus 574 dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~--~------~A~ekFq~I~EAYeVLSDp~ 629 (1136)
T PTZ00341 574 LFYDILGVGVNADMKEISERYFKLAENYYPPKRSG--N------EGFHKFKKINEAYQILGDID 629 (1136)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--c------hHHHHHHHHHHHHHHhCCHH
Confidence 35899999999999999999999999999999863 1 36779999999999998754
No 49
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.36 E-value=4.3e-07 Score=88.63 Aligned_cols=57 Identities=23% Similarity=0.378 Sum_probs=47.9
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011238 424 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 487 (490)
Q Consensus 424 s~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdqe 487 (490)
..++.||+.+.++.++||||||++.+++||||++..+ .-+..|+.|++||..+.++.
T Consensus 100 DPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~-------~~e~~~~~I~KAY~aLTD~~ 156 (230)
T KOG0721|consen 100 DPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEE-------GDEEFFEAIAKAYQALTDKK 156 (230)
T ss_pred CcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcc-------hhHHHHHHHHHHHHHhcchh
Confidence 3688999999999999999999999999999987422 23566889999999887653
No 50
>PRK03578 hscB co-chaperone HscB; Provisional
Probab=98.33 E-value=9.5e-07 Score=82.51 Aligned_cols=61 Identities=18% Similarity=0.319 Sum_probs=51.0
Q ss_pred CCCcccCCCC--CCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhc
Q 011238 424 SGWCSVPLTS--LIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISE 486 (490)
Q Consensus 424 s~WK~VGmsd--LaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdq 486 (490)
.-|+.+||.. .+++.+||++||++..++||||..+ .+...+.+|...+..||+||++|++-
T Consensus 7 dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~--~~~~e~~~a~~~s~~iN~AY~tL~~p 69 (176)
T PRK03578 7 DHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAA--AGDAEKRVAMQWATRANEAYQTLRDP 69 (176)
T ss_pred CHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--CCHHHHHHHHHHHHHHHHHHHHhCCh
Confidence 3467778887 4788999999999999999999874 34556778888999999999999864
No 51
>PRK00294 hscB co-chaperone HscB; Provisional
Probab=98.29 E-value=1.5e-06 Score=81.23 Aligned_cols=60 Identities=17% Similarity=0.318 Sum_probs=49.8
Q ss_pred CCcccCCCCC--CChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhc
Q 011238 425 GWCSVPLTSL--IESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISE 486 (490)
Q Consensus 425 ~WK~VGmsdL--aTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdq 486 (490)
.+..+|+... ++..+||++||++..++||||... .+...+.+|...|..||+||++|++.
T Consensus 6 ~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~--~~~~e~~~a~~~s~~IN~AY~~L~~p 67 (173)
T PRK00294 6 HFALFDLQPSFRLDLDQLATRYRELAREVHPDRFAD--APEREQRLALERSASLNEAYQTLKSP 67 (173)
T ss_pred hhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--CcHHHHHHHHHHHHHHHHHHHHhCCh
Confidence 3566677764 788999999999999999999864 44555678889999999999999864
No 52
>PRK01356 hscB co-chaperone HscB; Provisional
Probab=98.28 E-value=1.2e-06 Score=81.06 Aligned_cols=56 Identities=25% Similarity=0.302 Sum_probs=47.2
Q ss_pred CcccCCCCC--CChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhh
Q 011238 426 WCSVPLTSL--IESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFIS 485 (490)
Q Consensus 426 WK~VGmsdL--aTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkd 485 (490)
|+.+||... ++..+||++||++.+++||||..+ ...+..+...|..||+||++|++
T Consensus 5 f~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~----~~~k~~~~~~s~~in~AY~~L~d 62 (166)
T PRK01356 5 FQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKT----LQEKEQNLIIASELNNAYSTLKD 62 (166)
T ss_pred HHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHHHHHHHHhCC
Confidence 667888885 789999999999999999999752 34556677789999999999985
No 53
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.28 E-value=6.1e-07 Score=94.81 Aligned_cols=55 Identities=29% Similarity=0.396 Sum_probs=49.9
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhc
Q 011238 424 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISE 486 (490)
Q Consensus 424 s~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdq 486 (490)
..|-.+|+...+++++|||.|||++..|||||+... .|+++|+.|+.||+++.+.
T Consensus 236 daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~~~--------~A~Eafk~Lq~Afevig~~ 290 (490)
T KOG0720|consen 236 DAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNMIP--------RAEEAFKKLQVAFEVIGDS 290 (490)
T ss_pred CchhhcCCCCCCCHHHHHHHHHhhceEeCCCccCCh--------hHHHHHHHHHHHHHHhcch
Confidence 378899999999999999999999999999998742 6999999999999998764
No 54
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=98.11 E-value=3e-06 Score=94.32 Aligned_cols=54 Identities=19% Similarity=0.273 Sum_probs=47.8
Q ss_pred CCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhc
Q 011238 425 GWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISE 486 (490)
Q Consensus 425 ~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdq 486 (490)
-|+.|||...++..+||++|||+++++||||... ..|+.+|+.|++||++|++.
T Consensus 4 YYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~--------~eAeekFqeINEAYEVLSDP 57 (871)
T TIGR03835 4 YYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKA--------PDAASIFAEINEANDVLSNP 57 (871)
T ss_pred hhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--------hhHHHHHHHHHHHHHHhCCH
Confidence 4789999999999999999999999999999753 14677899999999999864
No 55
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB. This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.
Probab=98.10 E-value=5.1e-06 Score=76.15 Aligned_cols=50 Identities=22% Similarity=0.379 Sum_probs=42.3
Q ss_pred CChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhc
Q 011238 435 IESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISE 486 (490)
Q Consensus 435 aTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdq 486 (490)
++..+|+++||++..++||||..+. +...+..|...|..||+||++|++-
T Consensus 3 iD~~~L~~~yr~lq~~~HPD~~~~~--~~~~~~~a~~~s~~iN~AY~~L~~p 52 (157)
T TIGR00714 3 LDTQALSLRYQDLQRQYHPDKFASG--SAQEQLAAVQQSTTLNQAYQTLKDP 52 (157)
T ss_pred CCHHHHHHHHHHHHHHHCcCCCCCC--ChhhhHHHHHHHHHHHHHHHHhCCh
Confidence 5789999999999999999998643 3344567889999999999999863
No 56
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.06 E-value=5.1e-06 Score=87.61 Aligned_cols=77 Identities=25% Similarity=0.314 Sum_probs=63.7
Q ss_pred CCCccHHHHHHhcccccCC---CCCCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHH
Q 011238 404 GKETNIRLLLSALHHVLWP---NSGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAW 480 (490)
Q Consensus 404 GKe~NIRALLSSLh~VLW~---es~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAY 480 (490)
-+.-+||.+|--.+.-|=. ..-|+.||+..+++..+|||||||+.|.+||||+.. . ++.||..|+++-+||
T Consensus 351 ~~s~e~r~~l~~A~~aLkkSkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~ag--s----q~eaE~kFkevgeAy 424 (486)
T KOG0550|consen 351 EKDCEIRRTLREAQLALKKSKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAG--S----QKEAEAKFKEVGEAY 424 (486)
T ss_pred ccccchHHHHHHHHHHHHHhhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcc--h----hHHHHHHHHHHHHHH
Confidence 3446788888877766521 234799999999999999999999999999999863 2 568999999999999
Q ss_pred HHHhhc
Q 011238 481 SAFISE 486 (490)
Q Consensus 481 E~Fkdq 486 (490)
.++.+-
T Consensus 425 ~il~d~ 430 (486)
T KOG0550|consen 425 TILSDP 430 (486)
T ss_pred HHhcCH
Confidence 998764
No 57
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]
Probab=98.04 E-value=4.8e-06 Score=88.55 Aligned_cols=85 Identities=18% Similarity=0.257 Sum_probs=67.2
Q ss_pred HHHhhhc-C-CCccHHHHHHhcccccCCCCCCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHH
Q 011238 397 EIRLWSA-G-KETNIRLLLSALHHVLWPNSGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFS 474 (490)
Q Consensus 397 KI~~Wa~-G-Ke~NIRALLSSLh~VLW~es~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~ 474 (490)
-|-.|.- | =--|||. |.-+-.=+| ..|+.||+.......+||++||++..++||||++. ...+.+..-|+.+.
T Consensus 73 ~ivgWl~i~~L~~~I~~-~k~~~~~~f--DPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~--mvn~~rse~Ee~y~ 147 (610)
T COG5407 73 TIVGWLVISYLISNIRT-LKIEYRRGF--DPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPP--MVNELRSEYEEKYK 147 (610)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHcCC--ChHHhhcccCCCcHHHHHHHHHhheeecChhhcCC--CChhHHHHHHHHHH
Confidence 3667763 1 1123444 444445567 47899999999999999999999999999999974 66788889999999
Q ss_pred HHHHHHHHHhhc
Q 011238 475 VLQDAWSAFISE 486 (490)
Q Consensus 475 eLNEAYE~Fkdq 486 (490)
+|++||..+.++
T Consensus 148 ~ItkAY~~lTd~ 159 (610)
T COG5407 148 TITKAYGLLTDK 159 (610)
T ss_pred HHHHHHHhhhhH
Confidence 999999998764
No 58
>PHA02624 large T antigen; Provisional
Probab=98.00 E-value=6.2e-06 Score=90.21 Aligned_cols=50 Identities=22% Similarity=0.247 Sum_probs=42.9
Q ss_pred CcccCCCCCC--ChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhc
Q 011238 426 WCSVPLTSLI--ESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISE 486 (490)
Q Consensus 426 WK~VGmsdLa--Tp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdq 486 (490)
|+.|||...+ +..+||+||||+++++||||. | + +..|++||+||++|.+.
T Consensus 14 yelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKg---G-d-------eekfk~Ln~AYevL~d~ 65 (647)
T PHA02624 14 MDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKG---G-D-------EEKMKRLNSLYKKLQEG 65 (647)
T ss_pred HHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCC---C-c-------HHHHHHHHHHHHHHhcH
Confidence 5677888888 999999999999999999993 2 2 34699999999999864
No 59
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.98 E-value=4e-06 Score=76.92 Aligned_cols=56 Identities=29% Similarity=0.385 Sum_probs=46.2
Q ss_pred CCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhc
Q 011238 425 GWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISE 486 (490)
Q Consensus 425 ~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdq 486 (490)
-++.++|..-++..+||+||+|+++++||||+.. . +..|+..|.+|++||+++.+.
T Consensus 5 ~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~-----~-~~~~~~~~~~~~ea~~~ls~~ 60 (306)
T KOG0714|consen 5 YYKILGIARSASEEDIKKAYRKLALKYHPDKNPS-----P-KEVAEAKFKEIAEAYEVLSDP 60 (306)
T ss_pred HHHHhCccccccHHHHHHHHHHHHHhhCCCCCCC-----c-hhhHHHHHhhhhccccccCCH
Confidence 4677888888888899999999999999999653 2 446767999999999987653
No 60
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.94 E-value=8.1e-06 Score=79.72 Aligned_cols=56 Identities=21% Similarity=0.431 Sum_probs=49.2
Q ss_pred CCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhc
Q 011238 425 GWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISE 486 (490)
Q Consensus 425 ~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdq 486 (490)
.|..|.|...++.++||+-|||+.+.+||||++. ...-|...|.+|..||..|.+.
T Consensus 55 pfeVLqIdpev~~edikkryRklSilVHPDKN~D------d~~rAqkAFdivkKA~k~l~n~ 110 (250)
T KOG1150|consen 55 PFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPD------DAERAQKAFDIVKKAYKLLEND 110 (250)
T ss_pred hHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcc------cHHHHHHHHHHHHHHHHHHhCH
Confidence 5788899999999999999999999999999974 2346889999999999988654
No 61
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.83 E-value=7.9e-06 Score=82.11 Aligned_cols=69 Identities=22% Similarity=0.325 Sum_probs=54.6
Q ss_pred HHHHhcccccCCC--C----CCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHh
Q 011238 411 LLLSALHHVLWPN--S----GWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFI 484 (490)
Q Consensus 411 ALLSSLh~VLW~e--s----~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fk 484 (490)
.||-+|--+|-++ | -|..|||+..+...+|+||||++++++|||++.. . .++..|..|..||+.++
T Consensus 15 ~Llp~l~vgl~egLYCG~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~--~------e~k~~F~~iAtayeilk 86 (329)
T KOG0722|consen 15 LLLPSLFVGLSEGLYCGAENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRD--P------ESKKLFVKIATAYEILK 86 (329)
T ss_pred HHHHHHHHhhhhhhcccchhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCC--c------hhhhhhhhhhccccccc
Confidence 3444444444443 2 3889999999999999999999999999999974 2 24488999999999998
Q ss_pred hcc
Q 011238 485 SED 487 (490)
Q Consensus 485 dqe 487 (490)
+++
T Consensus 87 d~e 89 (329)
T KOG0722|consen 87 DNE 89 (329)
T ss_pred chh
Confidence 875
No 62
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]
Probab=97.78 E-value=2e-05 Score=82.35 Aligned_cols=61 Identities=23% Similarity=0.272 Sum_probs=55.8
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhccC
Q 011238 424 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISEDV 488 (490)
Q Consensus 424 s~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdqe~ 488 (490)
.-||.|||...+...+|-|||||++.++|||--+. +|.|..|+.+|+-|..|-++|.+.++
T Consensus 395 DYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqd----EeEKKkAEKKFIDIAAAKEVLsd~Ek 455 (504)
T KOG0624|consen 395 DYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQD----EEEKKKAEKKFIDIAAAKEVLSDPEK 455 (504)
T ss_pred hHHHHhhhcccccHHHHHHHHHHHHHhcCCccccC----HHHHHHHHHhhhhHHHHHHhhcCHHH
Confidence 35899999999999999999999999999999863 67899999999999999999998764
No 63
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=97.68 E-value=4.3e-05 Score=76.91 Aligned_cols=32 Identities=25% Similarity=0.379 Sum_probs=30.6
Q ss_pred CcccCCCCCCChhHHHHHHHHHHHhcCCCccc
Q 011238 426 WCSVPLTSLIESSHVKKAYQKARLCLHPDKLQ 457 (490)
Q Consensus 426 WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~ 457 (490)
|+.|+|...++.++||+||||+++++||||++
T Consensus 3 y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~ 34 (354)
T TIGR02349 3 YEILGVSKDASEEEIKKAYRKLAKKYHPDRNK 34 (354)
T ss_pred HHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
Confidence 78899999999999999999999999999985
No 64
>PRK01773 hscB co-chaperone HscB; Provisional
Probab=97.49 E-value=0.00024 Score=66.62 Aligned_cols=58 Identities=19% Similarity=0.315 Sum_probs=48.9
Q ss_pred CcccCCCCC--CChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhh
Q 011238 426 WCSVPLTSL--IESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFIS 485 (490)
Q Consensus 426 WK~VGmsdL--aTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkd 485 (490)
++.+|+..- ++..++++.|+++...+||||..+ .+...+.+|...-..||+||.+|++
T Consensus 5 F~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~--~~~~eq~~a~~~ss~iN~AY~tLkd 64 (173)
T PRK01773 5 FALFDLPVDFQLDNALLSERYLALQKSLHPDNFAN--SSAQEQRLAMQKSAEVNDALQILKD 64 (173)
T ss_pred HHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccC--CCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 345566664 899999999999999999999975 4567778898999999999999986
No 65
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]
Probab=97.15 E-value=0.00056 Score=78.94 Aligned_cols=41 Identities=24% Similarity=0.477 Sum_probs=35.8
Q ss_pred ChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhc
Q 011238 436 ESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISE 486 (490)
Q Consensus 436 Tp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdq 486 (490)
.+++|||+|+|++.++||||++. ...+|..+|+|||.++.+
T Consensus 1298 ~~~KirrqY~kLA~kYHPDKNPE----------GRemFe~VnKAYE~L~~~ 1338 (2235)
T KOG1789|consen 1298 KPAKIRRQYYKLAAKYHPDKNPE----------GREMFERVNKAYELLSSE 1338 (2235)
T ss_pred cHHHHHHHHHHHHHHhCCCCCch----------HHHHHHHHHHHHHHHHHH
Confidence 45899999999999999999973 456799999999999854
No 66
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=97.12 E-value=0.00037 Score=64.38 Aligned_cols=60 Identities=20% Similarity=0.255 Sum_probs=55.4
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 011238 424 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAF 483 (490)
Q Consensus 424 s~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~F 483 (490)
..++.+++....+..+||++||+++...|||++...|.+.+...+++.++.+|++||+.+
T Consensus 114 ~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~ 173 (174)
T COG1076 114 DALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI 173 (174)
T ss_pred hHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 457788888899999999999999999999999999999999999999999999999865
No 67
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=96.60 E-value=0.0041 Score=55.75 Aligned_cols=50 Identities=22% Similarity=0.355 Sum_probs=41.7
Q ss_pred cccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011238 427 CSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 487 (490)
Q Consensus 427 K~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdqe 487 (490)
..|+|.+.++.++||.|.||+++..||||- .++ |+| ..||+|++.+..+.
T Consensus 60 lIL~v~~s~~k~KikeaHrriM~~NHPD~G----GSP---YlA----sKINEAKdlLe~~~ 109 (112)
T KOG0723|consen 60 LILGVTPSLDKDKIKEAHRRIMLANHPDRG----GSP---YLA----SKINEAKDLLEGTS 109 (112)
T ss_pred HHhCCCccccHHHHHHHHHHHHHcCCCcCC----CCH---HHH----HHHHHHHHHHhccc
Confidence 478899999999999999999999999994 332 455 36999999997654
No 68
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
Probab=95.73 E-value=0.019 Score=58.99 Aligned_cols=76 Identities=21% Similarity=0.301 Sum_probs=53.8
Q ss_pred hhhHHHHHHHhhhcCCCccHHHHHHhcccccCCCCCCcccCCCC-CCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHH
Q 011238 390 ETELLDEEIRLWSAGKETNIRLLLSALHHVLWPNSGWCSVPLTS-LIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYV 468 (490)
Q Consensus 390 l~D~Vd~KI~~Wa~GKe~NIRALLSSLh~VLW~es~WK~VGmsd-LaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~I 468 (490)
+.+-+....+.|.. -++.+||. | ++.. -+++.+|++|.+|-++++||||... |++. -
T Consensus 29 ~~~~~~~d~k~Wk~---~DlYa~lg-L-------------skyR~ka~~~qi~kah~kkv~kyHPDk~aa-~g~~----~ 86 (379)
T COG5269 29 LNLYTREDFKNWKK---VDLYALLG-L-------------SKYRTKAIPPQILKAHKKKVYKYHPDKTAA-GGNK----G 86 (379)
T ss_pred HHHHHhhhhhhhhh---hhHHHHhc-h-------------HhhhcCCCcHHHHHHHHHHHHHhCccchhc-cCCC----C
Confidence 44445556677765 35666653 1 1111 4578999999999999999999854 4442 3
Q ss_pred HHHHHHHHHHHHHHHhhcc
Q 011238 469 AEKVFSVLQDAWSAFISED 487 (490)
Q Consensus 469 AE~VF~eLNEAYE~Fkdqe 487 (490)
+...|..|+.||++|.+..
T Consensus 87 ~d~fFk~iqkA~evL~D~~ 105 (379)
T COG5269 87 CDEFFKLIQKAREVLGDRK 105 (379)
T ss_pred cHHHHHHHHHHHHHhccHH
Confidence 5678999999999998754
No 69
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=88.51 E-value=0.71 Score=47.03 Aligned_cols=64 Identities=19% Similarity=0.280 Sum_probs=47.5
Q ss_pred cHHHHHHhccc---ccCCCCCCcccCCCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHH
Q 011238 408 NIRLLLSALHH---VLWPNSGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWS 481 (490)
Q Consensus 408 NIRALLSSLh~---VLW~es~WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE 481 (490)
=||.-|..||. ++- --+..|||.+.++.++|+-+|.+++..+|||--... .....|..|-+||.
T Consensus 31 iirnrll~~~kske~~~--e~fril~v~e~~~adevr~af~~lakq~hpdsgs~~--------adaa~f~qideafr 97 (342)
T KOG0568|consen 31 IIRNRLLHLHKSKEKIM--ECFRILGVEEGADADEVREAFHDLAKQVHPDSGSEE--------ADAARFIQIDEAFR 97 (342)
T ss_pred hHHHHHHHHhhhHHHHH--HHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCcc--------ccHHHHHHHHHHHH
Confidence 46666666663 111 126789999999999999999999999999985421 12356888888887
No 70
>PF14687 DUF4460: Domain of unknown function (DUF4460)
Probab=81.26 E-value=4.3 Score=36.27 Aligned_cols=50 Identities=20% Similarity=0.341 Sum_probs=41.4
Q ss_pred CCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhhc
Q 011238 434 LIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISE 486 (490)
Q Consensus 434 LaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkdq 486 (490)
..+..++|.|.|+..++||||-..+ .++++.+=+.-++.||.=.+.++..
T Consensus 5 ~~~~~~l~~aLr~Fy~~VHPDlF~~---~P~~k~~Ne~SLk~Ln~~Ld~l~~~ 54 (112)
T PF14687_consen 5 NLSSPDLRSALRPFYFAVHPDLFGQ---HPEEKQVNEESLKLLNSYLDSLKKR 54 (112)
T ss_pred hhhhHHHHHHHHHHHHHhCCccccc---ChHHHHhhHHHHHHHHHHHHHHhcc
Confidence 3456899999999999999999864 3567788888899999988888764
No 71
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=69.09 E-value=8.7 Score=35.82 Aligned_cols=46 Identities=17% Similarity=0.320 Sum_probs=37.3
Q ss_pred hHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhh
Q 011238 438 SHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFIS 485 (490)
Q Consensus 438 ~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkd 485 (490)
+..+..|+.+...+|||+... ++...+..+-..+..+|.||.++++
T Consensus 18 ~~l~~~~~~~~~~~~~dr~~~--~~~~~~~~~l~~~~~~~~a~~tLk~ 63 (174)
T COG1076 18 DALKLQYRELQRAYHPDRFGK--ASEAEQRKALQQSAEVNPAYQTLKD 63 (174)
T ss_pred hHhhhhHHHHHHhhCcccccc--cchHHHHHHHHHHHHhcchHHHHHH
Confidence 568899999999999999864 3444555566789999999999875
No 72
>COG3795 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=66.48 E-value=4 Score=37.62 Aligned_cols=23 Identities=39% Similarity=0.658 Sum_probs=18.0
Q ss_pred hhceeeEEecCCccCCCccchhHHHHHHHHHHhh
Q 011238 293 VMSSYVIEINSDYREGTGEAVSIDEAIAWAKEKF 326 (490)
Q Consensus 293 vmssyvieins~~re~~~~a~~~deaiawakekf 326 (490)
+--=||||. .++||||.|||..=
T Consensus 78 l~Gf~vie~-----------~dLdeA~e~A~~~P 100 (123)
T COG3795 78 LAGFYVIEV-----------RDLDEALEWAARCP 100 (123)
T ss_pred hCcEEEEEe-----------CCHHHHHHHHhcCC
Confidence 334588887 57999999999864
No 73
>PF08628 Nexin_C: Sorting nexin C terminal; InterPro: IPR013937 This region is found at the C terminus of proteins belonging to the nexin family. It is found on proteins which also contain IPR001683 from INTERPRO.
Probab=56.95 E-value=21 Score=30.78 Aligned_cols=72 Identities=22% Similarity=0.416 Sum_probs=44.4
Q ss_pred CCccHHHHHHhcccccCCCCCCcccCCCCCCChhH---HHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHH
Q 011238 405 KETNIRLLLSALHHVLWPNSGWCSVPLTSLIESSH---VKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQD 478 (490)
Q Consensus 405 Ke~NIRALLSSLh~VLW~es~WK~VGmsdLaTp~q---VKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNE 478 (490)
.+.+|=.+|..|++.|||+..|.+-.-. -|+++ -++.=+++++..=||-+..-=+...-+.-+..+|..|+.
T Consensus 36 se~~v~~~i~~l~~~lwP~g~~~~~~~~--Rt~~ek~~tr~~A~~~L~~~~P~~l~~vvG~~~~~~g~~~if~~LQ~ 110 (113)
T PF08628_consen 36 SEEQVARYIQLLRESLWPNGKLAEPPPP--RTEEEKLRTRQEARELLLSLLPDTLKKVVGSENSRRGARRIFEMLQN 110 (113)
T ss_pred CHHHHHHHHHHHHHhhCCCCCCCCCCCC--CCHHHHHHHHHHHHHHHHHhcHHHHHHccCHHHHHHHHHHHHHHHCC
Confidence 4568999999999999998765544442 23322 222223445777788865421223345567778877764
No 74
>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=46.60 E-value=35 Score=33.11 Aligned_cols=53 Identities=23% Similarity=0.264 Sum_probs=37.8
Q ss_pred CCCCCChhHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHhh
Q 011238 431 LTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFIS 485 (490)
Q Consensus 431 msdLaTp~qVKKAYRKAiLkvHPDKL~q~Ga~~EQK~IAE~VF~eLNEAYE~Fkd 485 (490)
+..-+.|..++.-|----.+.|||+..... ..+...|.+--.+||+||.+|++
T Consensus 18 ~~~~~~p~~l~~~~~~~skkL~~d~~~~~~--~~~~d~a~eqSa~lnkAY~TLk~ 70 (168)
T KOG3192|consen 18 LSFKIDPDKLKEKYTDISKKLHPDRPGLSF--AGDTDQASEQSAELNKAYDTLKD 70 (168)
T ss_pred cCCCCCcchhhHHHHHHHHhhCcccccccc--cccchhHHHHHHHHHHHHHHHHh
Confidence 344567788888888888999999943211 11222577778899999999986
No 75
>cd08815 Death_TNFRSF25_DR3 Death domain of Tumor Necrosis Factor Receptor superfamily 25. Death Domain (DD) found in Tumor Necrosis Factor (TNF) receptor superfamily 25 (TNFRSF25), also known as TRAMP (TNF receptor-related apoptosis-mediating protein), LARD, APO-3, WSL-1, or DR3 (Death Receptor-3). TNFRSF25 is primarily expressed in T cells, is activated by binding to its ligand TL1A, and plays an important role in T-cell function. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.
Probab=37.12 E-value=31 Score=29.69 Aligned_cols=32 Identities=13% Similarity=0.243 Sum_probs=27.2
Q ss_pred hhhhhHHHHHHHhhhcCCCccHHHHHHhcccc
Q 011238 388 DIETELLDEEIRLWSAGKETNIRLLLSALHHV 419 (490)
Q Consensus 388 ~~l~D~Vd~KI~~Wa~GKe~NIRALLSSLh~V 419 (490)
.-..|.+-+.++.|.++...+|-.||.+|+++
T Consensus 36 ~~~rda~y~ML~~W~~q~~a~~n~Ll~aL~~m 67 (77)
T cd08815 36 GRFRDQQYEMLKRWRQQQPAGLDAVYAALERM 67 (77)
T ss_pred cchHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 34668888899999988789999999999865
No 76
>COG2987 HutU Urocanate hydratase [Amino acid transport and metabolism]
Probab=36.39 E-value=39 Score=37.65 Aligned_cols=142 Identities=15% Similarity=0.178 Sum_probs=79.9
Q ss_pred cchhHHHHHHHHHHhhhccchhhhhhhhhhh-hcccccC---CCCcc----ccccccccCCccccCccccC--CCCChhh
Q 011238 311 EAVSIDEAIAWAKEKFQSQSSFTLAQQEKHE-LAADNEE---RPNAN----EFLDPQTAGHETLDSPMEEK--TNPTTEE 380 (490)
Q Consensus 311 ~a~~~deaiawakekf~s~~~~~~r~~~~~~-~~~~~~~---~p~~~----ef~d~lld~hg~tqs~~~~~--~~~~~~~ 380 (490)
-|..+||||+||+|.--.--.-|+--+||-- .-.+-+. +|+.= -.|||+.. -==.--.+++. ++..+..
T Consensus 215 ~a~~ldeAl~~a~~~~~ag~p~SIgl~GNaaei~~~l~~r~~~pD~vtDQTsaHdp~~G-Y~P~G~s~ee~~~lr~~d~~ 293 (561)
T COG2987 215 IAETLDEALALAEEATAAGEPISIGLLGNAAEILPELLRRGIRPDLVTDQTSAHDPLNG-YLPVGYTVEEADELREEDPD 293 (561)
T ss_pred hcCCHHHHHHHHHHHHhcCCceEEEEeccHHHHHHHHHHcCCCCceecccccccCcccC-cCCCcCCHHHHHHHHhhCHH
Confidence 4788999999999988765555666666611 0111111 33321 14443321 10011112221 1122222
Q ss_pred hhhcchhhhhhhHHHHHHHhhhcCC-----CccHHHHHHhcc---cccCCCC----------------CCcccCCCCCCC
Q 011238 381 GKEQSQDDIETELLDEEIRLWSAGK-----ETNIRLLLSALH---HVLWPNS----------------GWCSVPLTSLIE 436 (490)
Q Consensus 381 ~kEq~eK~~l~D~Vd~KI~~Wa~GK-----e~NIRALLSSLh---~VLW~es----------------~WK~VGmsdLaT 436 (490)
.-.+..+..+...|.+.+.-|..|- -+|||...---. -.-||+- .|..|+ -+
T Consensus 294 ~~~~~a~~sm~~hv~Aml~~q~~G~~~fDYGNnirq~a~d~G~~~aF~fPgfVpayIrPLFc~G~GPFRW~aLS----gd 369 (561)
T COG2987 294 KYRKLARASMARHVEAMLAFQDRGVPTFDYGNNIRQVAKDEGVENAFDFPGFVPAYIRPLFCEGIGPFRWVALS----GD 369 (561)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCeeeecchHHHHHHHhccccccccCCcchHHhhhhhhhcCcCCeeEEEec----CC
Confidence 3356667777788888888888764 379997654321 1224430 244333 36
Q ss_pred hhHHHHHHHHHHHhcCCCccc
Q 011238 437 SSHVKKAYQKARLCLHPDKLQ 457 (490)
Q Consensus 437 p~qVKKAYRKAiLkvHPDKL~ 457 (490)
|++|.|.=+++.-.+-||+.-
T Consensus 370 peDi~~tD~~~~el~p~n~~l 390 (561)
T COG2987 370 PEDIYKTDAAVKELFPDNKHL 390 (561)
T ss_pred HHHHHHHHHHHHHhCCCcHHH
Confidence 899999998888888888753
No 77
>PF08081 RBM1CTR: RBM1CTR (NUC064) family; InterPro: IPR012604 This region is found in RBM1-like RNA binding hnRNPs [].
Probab=33.90 E-value=18 Score=28.46 Aligned_cols=13 Identities=46% Similarity=0.884 Sum_probs=10.1
Q ss_pred ccccCCCCchhhh
Q 011238 43 SDVFGGPPRTLLA 55 (490)
Q Consensus 43 ~dvfggpprs~l~ 55 (490)
+|.||||||--.+
T Consensus 15 Rd~YggPPrRe~~ 27 (45)
T PF08081_consen 15 RDNYGGPPRREPM 27 (45)
T ss_pred cccCCCCCCCCCC
Confidence 5889999997443
No 78
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []. In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.
Probab=33.56 E-value=58 Score=30.00 Aligned_cols=31 Identities=13% Similarity=0.144 Sum_probs=23.2
Q ss_pred CcccCCCCCCChhHHHHHHHHHHHhcCCCcc
Q 011238 426 WCSVPLTSLIESSHVKKAYQKARLCLHPDKL 456 (490)
Q Consensus 426 WK~VGmsdLaTp~qVKKAYRKAiLkvHPDKL 456 (490)
-+.|+|.+.++.++|.+.|.++.-..+|+|.
T Consensus 61 ~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kG 91 (127)
T PF03656_consen 61 RQILNVKEELSREEIQKRYKHLFKANDPSKG 91 (127)
T ss_dssp HHHHT--G--SHHHHHHHHHHHHHHT-CCCT
T ss_pred HHHcCCCCccCHHHHHHHHHHHHhccCCCcC
Confidence 3578888889999999999999999999984
No 79
>COG3483 TDO2 Tryptophan 2,3-dioxygenase (vermilion) [Amino acid transport and metabolism]
Probab=30.37 E-value=69 Score=32.79 Aligned_cols=49 Identities=20% Similarity=0.347 Sum_probs=32.3
Q ss_pred hhHHHHHHHHHHHhcC---CCcccCCCCCHHHHHHHH--HHHHHHHHHHHHHhh
Q 011238 437 SSHVKKAYQKARLCLH---PDKLQQRGATAQQKYVAE--KVFSVLQDAWSAFIS 485 (490)
Q Consensus 437 p~qVKKAYRKAiLkvH---PDKL~q~Ga~~EQK~IAE--~VF~eLNEAYE~Fkd 485 (490)
.-|++.-++|+|+.-- =|-+.+...++.-|++|. +||.+||.||+++..
T Consensus 34 ~Hqt~ElW~klilhEl~aA~~llr~~~~~pa~kmL~Rv~ri~eql~~aw~Vl~T 87 (262)
T COG3483 34 QHQTSELWMKLILHELRAARDLLRADDLPPALKMLARVSRIFEQLNQAWDVLAT 87 (262)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4677777888776311 122222223456788876 899999999999864
No 80
>PF02655 ATP-grasp_3: ATP-grasp domain; InterPro: IPR003806 The ATP-grasp fold is one of several distinct ATP-binding folds, and is found in enzymes that catalyze the formation of amide bonds, catalyzing the ATP-dependent ligation of a carboxylate-containing molecule to an amino or thiol group-containing molecule []. This fold is found in many different enzyme families, including various peptide synthetases, biotin carboxylase, synapsin, succinyl-CoA synthetase, pyruvate phosphate dikinase, and glutathione synthetase, amongst others []. These enzymes contribute predominantly to macromolecular synthesis, using ATP-hydrolysis to activate their substrates. The ATP-grasp fold shares functional and structural similarities with the PIPK (phosphatidylinositol phosphate kinase) and protein kinase superfamilies. The ATP-grasp domain consists of two subdomains with different alpha+beta folds, which grasp the ATP molecule between them. Each subdomain provides a variable loop that forms part of the active site, with regions from other domains also contributing to the active site, even though these other domains are not conserved between the various ATP-grasp enzymes []. This entry describes a type of ATP-grasp fold that is found in a set of proteins of unknown function.; GO: 0005524 ATP binding, 0046872 metal ion binding; PDB: 3DF7_A.
Probab=26.24 E-value=32 Score=31.14 Aligned_cols=9 Identities=67% Similarity=1.003 Sum_probs=7.8
Q ss_pred eeeEEecCC
Q 011238 296 SYVIEINSD 304 (490)
Q Consensus 296 syvieins~ 304 (490)
-||||||+-
T Consensus 149 ~~viEINPR 157 (161)
T PF02655_consen 149 PYVIEINPR 157 (161)
T ss_dssp EEEEEEESS
T ss_pred EEEEEEcCC
Confidence 699999984
No 81
>PF11363 DUF3164: Protein of unknown function (DUF3164); InterPro: IPR021505 This entry is represented by Bacteriophage B3, Orf6. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.
Probab=24.18 E-value=73 Score=31.06 Aligned_cols=30 Identities=23% Similarity=0.540 Sum_probs=25.8
Q ss_pred hhhhhHHHHHHHhhhcCCCccHHHHHHhcc
Q 011238 388 DIETELLDEEIRLWSAGKETNIRLLLSALH 417 (490)
Q Consensus 388 ~~l~D~Vd~KI~~Wa~GKe~NIRALLSSLh 417 (490)
+..++.|++=|..|++|...+||+|+..+=
T Consensus 99 ~~Ak~lIde~l~~w~~g~~~~l~~lV~~af 128 (195)
T PF11363_consen 99 QAAKALIDECLNEWAKGADPELRALVNRAF 128 (195)
T ss_pred HHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Confidence 445778889999999999999999998865
No 82
>PF14267 DUF4357: Domain of unknown function (DUF4357)
Probab=22.31 E-value=19 Score=28.72 Aligned_cols=22 Identities=27% Similarity=0.339 Sum_probs=18.0
Q ss_pred eecccccccCCCCcCcCccCCC
Q 011238 247 VSVDDLELNSPSSPASSLCQEP 268 (490)
Q Consensus 247 ~s~~d~~~~~pss~~ss~~~~p 268 (490)
+...||.++|||+|+.-+++..
T Consensus 18 ~f~~d~~F~SPS~AA~~v~G~s 39 (55)
T PF14267_consen 18 VFTQDYLFSSPSAAAAVVLGRS 39 (55)
T ss_pred EEecCeEcCChHHHHHHHcCCC
Confidence 5677999999999988777654
Done!