Your job contains 1 sequence.
>011239
MCPKYDGKTGSSEQNADTLCPLNFDRNSQHSTVSTMSGSTAPTLVYQRRKLRGNSVPIFS
TQDPVNTKRSDDCLSVVSFDAVSVPMEEQHAVSLAEVGTEAVGTPILPPIISQSEPRLLR
SDSVQEQVVSDKLSKNIRHKMVEIDSINDSCSSSKSNMELLSASKKTEVDETGECSSSSA
VMLETTGKDLSAKDLCISILRNEGMLERFWPTQIRSSANDVDSGTGCSGICSRSCKICGR
SETALKLLLCDDCEEAFHVTCYTPRIKIVPSDEWFCHLCLKKKHKTLKATARKSPNIISE
KGRGRNASAKGEPSPIELMLTSTVPYTTSVRVGKGFQADIPDWLAPTNNDGYALGEPLEL
DTSECPSLHDLNSYNLSNLSSIGNWLQCKQVLEGTGDGVDGTSCGKWRRAPLFEVQTDDW
ECFCAVQWDPTHADCAVPQELETDEVSKQLKYLEMLRLRLDAKRRKFDRTKSRPPQLSAK
VLMKSETQTT
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 011239
(490 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2047630 - symbol:AT2G19260 "AT2G19260" species... 400 7.2e-51 3
WB|WBGene00016200 - symbol:dpff-1 species:6239 "Caenorhab... 131 1.5e-05 1
UNIPROTKB|E9PJ24 - symbol:PHRF1 "PHD and RING finger doma... 131 0.00011 1
UNIPROTKB|F8WEF5 - symbol:PHRF1 "PHD and RING finger doma... 131 0.00011 1
UNIPROTKB|Q9P1Y6 - symbol:PHRF1 "PHD and RING finger doma... 131 0.00011 1
UNIPROTKB|H9KZW6 - symbol:H9KZW6 "Uncharacterized protein... 127 0.00011 1
MGI|MGI:2141847 - symbol:Phrf1 "PHD and ring finger domai... 131 0.00012 1
RGD|708360 - symbol:Phrf1 "PHD and ring finger domains 1"... 131 0.00012 1
UNIPROTKB|Q63625 - symbol:Phrf1 "PHD and RING finger doma... 131 0.00012 1
UNIPROTKB|D4ADM0 - symbol:LOC100362634 "Protein LOC100362... 127 0.00012 1
UNIPROTKB|F1LXK8 - symbol:LOC100362634 "Protein LOC100362... 127 0.00046 1
UNIPROTKB|F1PXY6 - symbol:PHRF1 "Uncharacterized protein"... 131 0.00070 2
UNIPROTKB|I3LU11 - symbol:PHRF1 "Uncharacterized protein"... 131 0.00071 2
UNIPROTKB|B6CHA3 - symbol:uhrf1 "E3 ubiquitin-protein lig... 119 0.00093 1
>TAIR|locus:2047630 [details] [associations]
symbol:AT2G19260 "AT2G19260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR011124
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS51050
SMART:SM00249 EMBL:CP002685 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 IPI:IPI00526938
RefSeq:NP_179516.2 UniGene:At.39870 ProteinModelPortal:F4ISG1
SMR:F4ISG1 PRIDE:F4ISG1 EnsemblPlants:AT2G19260.1 GeneID:816443
KEGG:ath:AT2G19260 OMA:NCLVYSR Uniprot:F4ISG1
Length = 631
Score = 400 (145.9 bits), Expect = 7.2e-51, Sum P(3) = 7.2e-51
Identities = 84/174 (48%), Positives = 102/174 (58%)
Query: 301 KGRGRNASAKGEPSPIELMLTSTVPYTTSVRVGKGFQADIPDWLAPTNNDGYALGEPLEL 360
K + KG S E TVP+ +R+GK FQAD+PDW PT +D +GEPLE+
Sbjct: 459 KNQSSKTKTKGRISH-ERKWRVTVPFVIGIRIGKMFQADVPDWSGPTMSDTSFVGEPLEI 517
Query: 361 DTSECPXXXXXXXXXXXXXXXXXXWLQCKQVLEGTGDGVDGTSCGKWRRAPLFEVQTDDW 420
SE WLQC++ E T +G CGKWRRAP EVQT DW
Sbjct: 518 GQSEY-MHDLKKAKNSKKQCSAVNWLQCRE--EDT----NGVICGKWRRAPRSEVQTKDW 570
Query: 421 ECFCAVQWDPTHADCAVPQELETDEVSKQLKYLEMLRLRLDAKRRKFD-RTKSR 473
ECFC WDP+ ADCAVPQELET E+ KQLKY++MLR R DAK+RK + +SR
Sbjct: 571 ECFCCFSWDPSRADCAVPQELETSEILKQLKYIKMLRPRSDAKKRKLGPKGRSR 624
Score = 118 (46.6 bits), Expect = 7.2e-51, Sum P(3) = 7.2e-51
Identities = 42/127 (33%), Positives = 58/127 (45%)
Query: 161 LSASKKTEVDETGECSSSSAV----MLETTGKDLSAKDLCISILRNEGMLERFWPTQIRS 216
LS +KK D+ SS + + E T D C S L++ + T +S
Sbjct: 331 LSETKKNG-DQRSTVSSRELLDDTQVTEVTCSSDGTNDSCSS-LKSSSEVNS---TSSKS 385
Query: 217 SANDV---DSG---TGCSGICS--RSCKICGRSETALKLLLCDDCEEAFHVTCYTPRIKI 268
+D DSG T G S R CK C + T K+L+CD+CEEA+H C ++K
Sbjct: 386 REDDCYSSDSGVSETDTDGSSSPFRQCKHCDKPGTVEKMLICDECEEAYHTRCCGVQMKD 445
Query: 269 VPS-DEW 274
V DEW
Sbjct: 446 VAEIDEW 452
Score = 51 (23.0 bits), Expect = 7.2e-51, Sum P(3) = 7.2e-51
Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 21 PLNFDRNSQHSTVSTMSGSTAPTLVYQRRKLRGNSVPIFSTQDPVNT-KRSDDCL--SVV 77
P + + S+ S + +SG +LVY+RRK +P + + + ++ DD L S+V
Sbjct: 69 PKHQESCSEKSVMHKVSGKALTSLVYRRRKR--TLIPGGTEEHNLGKIRKQDDSLDDSIV 126
Query: 78 S 78
S
Sbjct: 127 S 127
Score = 47 (21.6 bits), Expect = 1.9e-50, Sum P(3) = 1.9e-50
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 44 LVYQRRKLRGNSVPIFSTQDPVNTKRSDD 72
LVY R+K RG S F+ + + DD
Sbjct: 145 LVYSRKKRRGESSCTFTGETTIRGDGLDD 173
Score = 37 (18.1 bits), Expect = 2.1e-49, Sum P(3) = 2.1e-49
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 44 LVYQRRKLRGNSVPI 58
L Y RRK G S+ +
Sbjct: 293 LTYSRRKKSGKSIGV 307
Score = 37 (18.1 bits), Expect = 2.1e-49, Sum P(3) = 2.1e-49
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 44 LVYQRRKLRGNSVPIFSTQDPVNTKRSDD 72
LVY +RK S F+ TKR+ D
Sbjct: 259 LVYSQRKQLVKSNGSFTESHVGKTKRNGD 287
>WB|WBGene00016200 [details] [associations]
symbol:dpff-1 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR007087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS01359 EMBL:FO080703 InterPro:IPR025750 Pfam:PF14051
eggNOG:NOG271547 HOGENOM:HOG000217918 GeneTree:ENSGT00530000063194
PIR:F88469 RefSeq:NP_498281.2 ProteinModelPortal:Q09477 SMR:Q09477
IntAct:Q09477 MINT:MINT-1048693 STRING:Q09477 PaxDb:Q09477
PRIDE:Q09477 EnsemblMetazoa:C28H8.9a GeneID:175832
KEGG:cel:CELE_C28H8.9 CTD:175832 WormBase:C28H8.9a
InParanoid:Q09477 OMA:TQIKEEY NextBio:889856 ArrayExpress:Q09477
Uniprot:Q09477
Length = 372
Score = 131 (51.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 25/52 (48%), Positives = 32/52 (61%)
Query: 223 SGTGCSGICSRSCKICGRSETALKLLLCDDCEEAFHVTCYTPRIKIVPSDEW 274
SG C C +SC ICG SE KLL CDDC+ +H+ C TP ++ P DE+
Sbjct: 304 SGWQCLE-C-KSCTICGTSENDDKLLFCDDCDRGYHLYCLTPALEKAPDDEY 353
>UNIPROTKB|E9PJ24 [details] [associations]
symbol:PHRF1 "PHD and RING finger domain-containing protein
1" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00184 SMART:SM00249 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 EMBL:AP006284 HGNC:HGNC:24351
ChiTaRS:PHRF1 IPI:IPI00978364 Ensembl:ENST00000533464
UCSC:uc010qwe.2 ArrayExpress:E9PJ24 Bgee:E9PJ24 Uniprot:E9PJ24
Length = 1645
Score = 131 (51.2 bits), Expect = 0.00011, P = 0.00011
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 235 CKICGRSETALKLLLCDDCEEAFHVTCYTPRIKIVPSDEWF 275
C++CGRS+ +LLLCD C+ +H+ C P ++ VP DEWF
Sbjct: 182 CEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWF 222
>UNIPROTKB|F8WEF5 [details] [associations]
symbol:PHRF1 "PHD and RING finger domain-containing protein
1" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00184 SMART:SM00249 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907 EMBL:AP006284
HGNC:HGNC:24351 ChiTaRS:PHRF1 IPI:IPI01013297
Ensembl:ENST00000413872 UCSC:uc009ybz.1 ArrayExpress:F8WEF5
Bgee:F8WEF5 Uniprot:F8WEF5
Length = 1647
Score = 131 (51.2 bits), Expect = 0.00011, P = 0.00011
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 235 CKICGRSETALKLLLCDDCEEAFHVTCYTPRIKIVPSDEWF 275
C++CGRS+ +LLLCD C+ +H+ C P ++ VP DEWF
Sbjct: 185 CEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWF 225
>UNIPROTKB|Q9P1Y6 [details] [associations]
symbol:PHRF1 "PHD and RING finger domain-containing protein
1" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0070063 "RNA polymerase binding" evidence=ISS]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 Prosite:PS00518 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0006397 GO:GO:0006366
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 InterPro:IPR017907 EMBL:AP006284
PharmGKB:PA164718737 HSSP:Q9UIG0 EMBL:AB040975 EMBL:BC004950
EMBL:BC013381 EMBL:BC029651 EMBL:BC041631 EMBL:BC136615
EMBL:BC144293 EMBL:BC146771 IPI:IPI00001813 IPI:IPI00827706
IPI:IPI00942878 RefSeq:NP_065952.2 UniGene:Hs.325838
ProteinModelPortal:Q9P1Y6 SMR:Q9P1Y6 IntAct:Q9P1Y6 STRING:Q9P1Y6
PhosphoSite:Q9P1Y6 DMDM:296439275 PaxDb:Q9P1Y6 PRIDE:Q9P1Y6
Ensembl:ENST00000264555 Ensembl:ENST00000416188
Ensembl:ENST00000534320 GeneID:57661 KEGG:hsa:57661 UCSC:uc001lqe.3
UCSC:uc010qwc.2 CTD:57661 GeneCards:GC11P000567 H-InvDB:HIX0201594
HGNC:HGNC:24351 HPA:HPA019867 MIM:611780 neXtProt:NX_Q9P1Y6
PharmGKB:PA164724459 eggNOG:NOG300312 HOVERGEN:HBG108250
InParanoid:Q9P1Y6 OMA:YMKKLHM OrthoDB:EOG4MSD0F ChiTaRS:PHRF1
GenomeRNAi:57661 NextBio:64425 ArrayExpress:Q9P1Y6 Bgee:Q9P1Y6
CleanEx:HS_PHRF1 Genevestigator:Q9P1Y6 GO:GO:0070063 Uniprot:Q9P1Y6
Length = 1649
Score = 131 (51.2 bits), Expect = 0.00011, P = 0.00011
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 235 CKICGRSETALKLLLCDDCEEAFHVTCYTPRIKIVPSDEWF 275
C++CGRS+ +LLLCD C+ +H+ C P ++ VP DEWF
Sbjct: 186 CEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWF 226
>UNIPROTKB|H9KZW6 [details] [associations]
symbol:H9KZW6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=IEA] [GO:0035097
"histone methyltransferase complex" evidence=IEA] [GO:0043627
"response to estrogen stimulus" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GeneTree:ENSGT00690000101661
EMBL:AADN02067269 EMBL:AADN02067270 Ensembl:ENSGALT00000020812
OMA:ELLPCEL Uniprot:H9KZW6
Length = 725
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 33/124 (26%), Positives = 58/124 (46%)
Query: 162 SASKKTEVDETGECSSSSAVMLETTGKDLSAKDLCI---SILRN-EGML-------ERFW 210
S+ K E ++ + ++ V+ T K + +D+C+ S R EG L + +
Sbjct: 583 SSPSKEEDEDDDDTMQNTVVLFSNTDKFVLMQDMCVVCGSFGRGAEGHLLACSQCSQCYH 642
Query: 211 PTQIRSSANDVDSGTGCSGICSRSCKICGRSETALKLLLCDDCEEAFHVTCYTPRIKIVP 270
P + S V G + C++CG++ +LLLCDDC+ ++H C P ++ VP
Sbjct: 643 PYCVNSKITKVMLLKGWRCVECIVCEVCGKASDPSRLLLCDDCDISYHTYCLDPPLQTVP 702
Query: 271 SDEW 274
W
Sbjct: 703 KGGW 706
>MGI|MGI:2141847 [details] [associations]
symbol:Phrf1 "PHD and ring finger domains 1" species:10090
"Mus musculus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=ISO] [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0070063 "RNA polymerase binding" evidence=ISO]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR002219
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00109 SMART:SM00184 SMART:SM00249
MGI:MGI:2141847 Prosite:PS00518 GO:GO:0005634 GO:GO:0035556
GO:GO:0046872 GO:GO:0008270 GO:GO:0006397 GO:GO:0006366
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 InterPro:IPR017907 CTD:57661
eggNOG:NOG300312 HOVERGEN:HBG108250 OMA:YMKKLHM ChiTaRS:PHRF1
GO:GO:0070063 EMBL:AC108908 EMBL:AC163434 EMBL:BC094566
EMBL:BC138446 EMBL:BC145719 EMBL:AK129387 IPI:IPI00881116
IPI:IPI00881246 RefSeq:NP_001074587.1 UniGene:Mm.248656
ProteinModelPortal:A6H619 SMR:A6H619 STRING:A6H619 PRIDE:A6H619
Ensembl:ENSMUST00000106027 Ensembl:ENSMUST00000122143 GeneID:101471
KEGG:mmu:101471 UCSC:uc009kkb.1 UCSC:uc009kkc.1
GeneTree:ENSGT00530000063661 HOGENOM:HOG000082501 InParanoid:Q505G1
NextBio:354944 Bgee:A6H619 Genevestigator:A6H619 Uniprot:A6H619
Length = 1682
Score = 131 (51.2 bits), Expect = 0.00012, P = 0.00012
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 235 CKICGRSETALKLLLCDDCEEAFHVTCYTPRIKIVPSDEWF 275
C++CGRS+ +LLLCD C+ +H+ C P ++ VP DEWF
Sbjct: 188 CEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWF 228
>RGD|708360 [details] [associations]
symbol:Phrf1 "PHD and ring finger domains 1" species:10116
"Rattus norvegicus" [GO:0006366 "transcription from RNA polymerase
II promoter" evidence=IMP] [GO:0006397 "mRNA processing"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IMP]
[GO:0070063 "RNA polymerase binding" evidence=IPI]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 RGD:708360 Prosite:PS00518
GO:GO:0019904 GO:GO:0046872 GO:GO:0008270 GO:GO:0006397
GO:GO:0006366 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 EMBL:AC118351 CTD:57661
eggNOG:NOG300312 HOVERGEN:HBG108250 OMA:YMKKLHM OrthoDB:EOG4MSD0F
GeneTree:ENSGT00530000063661 HOGENOM:HOG000082501 EMBL:U49057
IPI:IPI00211009 IPI:IPI00915115 PIR:T31422 RefSeq:NP_620793.1
UniGene:Rn.10530 ProteinModelPortal:Q63625 STRING:Q63625
PRIDE:Q63625 Ensembl:ENSRNOT00000023376 Ensembl:ENSRNOT00000051755
GeneID:245925 KEGG:rno:245925 UCSC:RGD:708360 InParanoid:Q63625
NextBio:623186 ArrayExpress:Q63625 Genevestigator:Q63625
Uniprot:Q63625
Length = 1685
Score = 131 (51.2 bits), Expect = 0.00012, P = 0.00012
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 235 CKICGRSETALKLLLCDDCEEAFHVTCYTPRIKIVPSDEWF 275
C++CGRS+ +LLLCD C+ +H+ C P ++ VP DEWF
Sbjct: 191 CEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWF 231
>UNIPROTKB|Q63625 [details] [associations]
symbol:Phrf1 "PHD and RING finger domain-containing protein
1" species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00184 SMART:SM00249 RGD:708360
Prosite:PS00518 GO:GO:0019904 GO:GO:0046872 GO:GO:0008270
GO:GO:0006397 GO:GO:0006366 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 EMBL:AC118351 CTD:57661
eggNOG:NOG300312 HOVERGEN:HBG108250 OMA:YMKKLHM OrthoDB:EOG4MSD0F
GeneTree:ENSGT00530000063661 HOGENOM:HOG000082501 EMBL:U49057
IPI:IPI00211009 IPI:IPI00915115 PIR:T31422 RefSeq:NP_620793.1
UniGene:Rn.10530 ProteinModelPortal:Q63625 STRING:Q63625
PRIDE:Q63625 Ensembl:ENSRNOT00000023376 Ensembl:ENSRNOT00000051755
GeneID:245925 KEGG:rno:245925 UCSC:RGD:708360 InParanoid:Q63625
NextBio:623186 ArrayExpress:Q63625 Genevestigator:Q63625
Uniprot:Q63625
Length = 1685
Score = 131 (51.2 bits), Expect = 0.00012, P = 0.00012
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 235 CKICGRSETALKLLLCDDCEEAFHVTCYTPRIKIVPSDEWF 275
C++CGRS+ +LLLCD C+ +H+ C P ++ VP DEWF
Sbjct: 191 CEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWF 231
>UNIPROTKB|D4ADM0 [details] [associations]
symbol:LOC100362634 "Protein LOC100362634" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
IPI:IPI00968435 Ensembl:ENSRNOT00000055502 OMA:SPHPEEL
ArrayExpress:D4ADM0 Uniprot:D4ADM0
Length = 733
Score = 127 (49.8 bits), Expect = 0.00012, P = 0.00012
Identities = 34/124 (27%), Positives = 57/124 (45%)
Query: 162 SASKKTEVDETGECSSSSAVMLETTGKDLSAKDLCI---SILRN-EGML-------ERFW 210
S+ K E +E + ++ V+ T K + +D+C+ S R EG L + +
Sbjct: 591 SSPSKEEEEEDDDTMQNTVVLFSNTDKFVLMQDMCVVCGSFGRGAEGHLLACSQCSQCYH 650
Query: 211 PTQIRSSANDVDSGTGCSGICSRSCKICGRSETALKLLLCDDCEEAFHVTCYTPRIKIVP 270
P + S V G + C++CG++ +LLLCDDC+ ++H C P + VP
Sbjct: 651 PYCVNSKITKVMLLKGWRCVECIVCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVP 710
Query: 271 SDEW 274
W
Sbjct: 711 KGGW 714
>UNIPROTKB|F1LXK8 [details] [associations]
symbol:LOC100362634 "Protein LOC100362634" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR009071 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00249 GO:GO:0046872
GO:GO:0008284 GO:GO:0008270 GO:GO:0045944 SMART:SM00398
SUPFAM:SSF47095 GO:GO:0044212 GO:GO:0043627 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0033148
GO:GO:0035097 GeneTree:ENSGT00690000101661 IPI:IPI00560982
Ensembl:ENSRNOT00000040635 ArrayExpress:F1LXK8 Uniprot:F1LXK8
Length = 2383
Score = 127 (49.8 bits), Expect = 0.00046, P = 0.00046
Identities = 34/124 (27%), Positives = 57/124 (45%)
Query: 162 SASKKTEVDETGECSSSSAVMLETTGKDLSAKDLCI---SILRN-EGML-------ERFW 210
S+ K E +E + ++ V+ T K + +D+C+ S R EG L + +
Sbjct: 45 SSPSKEEEEEDDDTMQNTVVLFSNTDKFVLMQDMCVVCGSFGRGAEGHLLACSQCSQCYH 104
Query: 211 PTQIRSSANDVDSGTGCSGICSRSCKICGRSETALKLLLCDDCEEAFHVTCYTPRIKIVP 270
P + S V G + C++CG++ +LLLCDDC+ ++H C P + VP
Sbjct: 105 PYCVNSKITKVMLLKGWRCVECIVCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVP 164
Query: 271 SDEW 274
W
Sbjct: 165 KGGW 168
>UNIPROTKB|F1PXY6 [details] [associations]
symbol:PHRF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907 OMA:YMKKLHM
GeneTree:ENSGT00530000063661 EMBL:AAEX03011329
Ensembl:ENSCAFT00000010559 Uniprot:F1PXY6
Length = 1637
Score = 131 (51.2 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 235 CKICGRSETALKLLLCDDCEEAFHVTCYTPRIKIVPSDEWF 275
C++CGRS+ +LLLCD C+ +H+ C P ++ VP DEWF
Sbjct: 191 CEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWF 231
Score = 41 (19.5 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 329 SVRVGKGFQADIPDWLAPTNNDGYALGE-PLELDTSECP 366
S+R K +++I D PT +D + G P L + P
Sbjct: 819 SIRKTKQLKSEIYDPFDPTGSDSSSAGSSPERLGSGLLP 857
>UNIPROTKB|I3LU11 [details] [associations]
symbol:PHRF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR002219
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00109 SMART:SM00184 SMART:SM00249
Prosite:PS00518 GO:GO:0035556 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907 OMA:YMKKLHM
GeneTree:ENSGT00530000063661 EMBL:FP015900
Ensembl:ENSSSCT00000024857 Uniprot:I3LU11
Length = 1643
Score = 131 (51.2 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 235 CKICGRSETALKLLLCDDCEEAFHVTCYTPRIKIVPSDEWF 275
C++CGRS+ +LLLCD C+ +H+ C P ++ VP DEWF
Sbjct: 185 CEVCGRSDREDRLLLCDGCDAGYHMECLEPPLQEVPVDEWF 225
Score = 41 (19.5 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 307 ASAKGEPSPIE-----LMLTSTVPYTTSVRVGKG 335
ASA + P+ L+LT VP T+ +R G
Sbjct: 235 ASAAADAGPVSEEEVSLLLTDVVPTTSRLRPHAG 268
>UNIPROTKB|B6CHA3 [details] [associations]
symbol:uhrf1 "E3 ubiquitin-protein ligase UHRF1"
species:8355 "Xenopus laevis" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000790 "nuclear chromatin" evidence=ISS] [GO:0000791
"euchromatin" evidence=ISS] [GO:0000792 "heterochromatin"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005657 "replication fork" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0010216
"maintenance of DNA methylation" evidence=ISS] [GO:0016574 "histone
ubiquitination" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0044729 "hemi-methylated DNA-binding" evidence=ISS] [GO:0051865
"protein autoubiquitination" evidence=ISS] InterPro:IPR001841
InterPro:IPR000626 InterPro:IPR001965 InterPro:IPR003105
InterPro:IPR019787 Pfam:PF00240 Pfam:PF00628 Pfam:PF02182
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184
SMART:SM00213 SMART:SM00249 SMART:SM00466 UniPathway:UPA00143
Prosite:PS00299 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0000122 GO:GO:0007049 GO:GO:0000790
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0004842 GO:GO:0035064
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR017907 GO:GO:0042787
GO:GO:0051865 GO:GO:0000792 GO:GO:0005657 GO:GO:0016574
GO:GO:0010216 Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0000791
KO:K10638 Gene3D:2.30.280.10 CTD:29128 HOVERGEN:HBG059298
GO:GO:0044729 InterPro:IPR021991 Pfam:PF12148 EMBL:EU177101
RefSeq:NP_001129236.1 UniGene:Xl.23750 ProteinModelPortal:B6CHA3
GeneID:432234 KEGG:xla:432234 Xenbase:XB-GENE-5821540
Uniprot:B6CHA3
Length = 772
Score = 119 (46.9 bits), Expect = 0.00093, P = 0.00093
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 234 SCKICGRSETALKLLLCDDCEEAFHVTCYTPRIKIVPSDE-WF 275
+C ICG + K LLCD+C+ AFH+ C P + ++P DE W+
Sbjct: 315 ACCICGGKQDPEKQLLCDECDLAFHIYCLKPPLSVIPQDEDWY 357
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.130 0.389 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 490 442 0.00090 118 3 11 23 0.44 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 14
No. of states in DFA: 617 (66 KB)
Total size of DFA: 284 KB (2147 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 36.58u 0.13s 36.71t Elapsed: 00:00:02
Total cpu time: 36.58u 0.13s 36.71t Elapsed: 00:00:02
Start: Tue May 21 04:07:46 2013 End: Tue May 21 04:07:48 2013