Citrus Sinensis ID: 011242

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490
MAEFVSFWLLLLVSMLLAFVLGLIILNHNLPLFLRLSHVPKGTFGLPLLGETLSFLKPHSSNSLGTFLQDHCSRYGKVFKSHLFFTPTVVSCDAELNYFILQNEGKLFQCSYPKTIPGILGNLSMLVAVGDTHRRLRNAALSLVTITKSKPEFLNDIENFAIQILDSWKDKPQVIFCEEARKFTFNVIVKQVLGLTPEEPETTKILEDFLTFMKGLISLPLYIPGTPYARAVKARRRISSTVKAIIEKRRRRSSNNNSADNSEKKNSDFLEILLCVDTLSEDEKVSFVLDSLLGGYETTSLLMALVVHFLGQSPTALEQLKLEHQTIRSMKQNNEHLNWEDYKKMDFTQNVINEALRYGNVVKFVHRKALKDVKYRDYLIPSGWKVLPVFTAVHLDPSLHANAFQFHPWRWENQDQTCKKFTPFGGGSRCCPGSELAKVEVAFFLHHLVQNFRWRNQDEDQPIAYPYVEFKRGLVLNVECCSDEAENKQH
cccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHcccccccHHHHHHHHHHHHcccEEEccccccEEEEEcHHHHHHHHHccccEEEEccccccccccccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccccEEcHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHccccccccHHHHccccHHHHHHHHHHcccccccccccEEcccEEEccEEEccccEEEcccHHHcccccccccccccccccccccccccccEEcccccccccccHHHHHHHHHHHHHHHHHccEEEEccccccccccccccccccEEEEEEcccccccccc
cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEcHHHHHHccccccccHHHHHHHHHHcccEEEEEEccccEEEEccHHHHHHHHHHccHHHcccccccHHHHHccccEEccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHccHHHHHHHHHccccccHHHHHHHHHHHHHHcccccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHcccccccHHHHHHcHHHHHHHHHHHHHccccccccccccccEEEccEEcccccEEEEEEEEEcccccccccHHHcccHHccccccccEEEEEcccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccEEEEEcccccccccccc
MAEFVSFWLLLLVSMLLAFVLGLIILnhnlplflrlshvpkgtfglpllgetlsflkphssnslgtflqdHCSRYGKVFKSHLFFTPTVVSCDAELNYFILqnegklfqcsypktipgilgnLSMLVAVGDTHRRLRNAALSLVTITKSKPEFLNDIENFAIQILdswkdkpqviFCEEARKFTFNVIVKQVlgltpeepetTKILEDFLTFMKGlislplyipgtpyARAVKARRRISSTVKAIIEKRrrrssnnnsadnsekknsDFLEILLCVdtlsedekVSFVLDSLLGGYETTSLLMALVVHFLGQSPTALEQLKLEHQTIRSMKQNnehlnwedykkmdfTQNVINEALRYGNVVKFVHRkalkdvkyrdylipsgwkvlpvftavhldpslhanafqfhpwrwenqdqtckkftpfgggsrccpgselAKVEVAFFLHHLVQNfrwrnqdedqpiaypyvefkRGLVLNVEccsdeaenkqh
MAEFVSFWLLLLVSMLLAFVLGLIILNHNLPLFLRLSHVPKGTFGLPLLGETLSFLKPHSSNSLGTFLQDHCSRYGKVFKSHLFFTPTVVSCDAELNYFILQNEGKLFQCSYPKTIPGILGNLSMLVAVGDTHRRLRNAALSLVtitkskpeflNDIENFAIQILDSWKDKPQVIFCEEARKFTFNVIVKQvlgltpeepeTTKILEDFLTFMKGLISLPLYIPGTPYARAVKARRRISSTVKaiiekrrrrssnnnsadnsekknsdfLEILLCVDTLSEDEKVSFVLDSLLGGYETTSLLMALVVHFLGQSPTALEQLKLEHQTIRSMKQNNEHLNWEDYKKMDFTQNVINEALRYGNVVKFVHRKalkdvkyrdyLIPSGWKVLPVFTAVHLDPSLHANAFQFHPWRWENQDQTCKKFTPFGGGSRCCPGSELAKVEVAFFLHHLVQNFRWRNQDEDQPIAYPYVEFKRGLVLNVECCSdeaenkqh
MAEfvsfwllllvsmllafvlglIILNHNLPLFLRLSHVPKGTFGLPLLGETLSFLKPHSSNSLGTFLQDHCSRYGKVFKSHLFFTPTVVSCDAELNYFILQNEGKLFQCSYPKTIPGILGNLSMLVAVGDTHRRLRNAALSLVTITKSKPEFLNDIENFAIQILDSWKDKPQVIFCEEARKFTFNVIVKQVLGLTPEEPETTKILEDFLTFMKGLISLPLYIPGTPYARAVKARRRISSTVKAIIekrrrrssnnnsadnsekknsdFLEILLCVDTLSEDEKVSFVLDSLLGGYETTSLLMALVVHFLGQSPTALEQLKLEHQTIRSMKQNNEHLNWEDYKKMDFTQNVINEALRYGNVVKFVHRKALKDVKYRDYLIPSGWKVLPVFTAVHLDPSLHANAFQFHPWRWENQDQTCKKFTPFGGGSRCCPGSELAKVEVAFFLHHLVQNFRWRNQDEDQPIAYPYVEFKRGLVLNVECCSDEAENKQH
***FVSFWLLLLVSMLLAFVLGLIILNHNLPLFLRLSHVPKGTFGLPLLGETLSFLKPHSSNSLGTFLQDHCSRYGKVFKSHLFFTPTVVSCDAELNYFILQNEGKLFQCSYPKTIPGILGNLSMLVAVGDTHRRLRNAALSLVTITKSKPEFLNDIENFAIQILDSWKDKPQVIFCEEARKFTFNVIVKQVLGLTPEEPETTKILEDFLTFMKGLISLPLYIPGTPYARAVKARRRISSTVKA************************FLEILLCVDTLSEDEKVSFVLDSLLGGYETTSLLMALVVHFLGQSPTALEQLKLEHQTI******NEHLNWEDYKKMDFTQNVINEALRYGNVVKFVHRKALKDVKYRDYLIPSGWKVLPVFTAVHLDPSLHANAFQFHPWRWENQDQTCKKFTPFGGGSRCCPGSELAKVEVAFFLHHLVQNFRWRNQDEDQPIAYPYVEFKRGLVLNVECC*********
*AEFVSFWLLLLVSMLLAFVLGLIILNHNL************TFGLPLLGETLSFLKPHSSNSLGTFLQDHCSRYGKVFKSHLFFTPTVVSCDAELNYFILQNEGKLFQCSYPKTIPGILGNLSMLVAVGDTHRRLRNAALSLVT**KS*PEFLNDIENFAIQILDSWKDKPQVIFCEEARKFTFNVIVKQVLGLTPEEPETTKILEDFLTFMKGLISLPLYIPGTPYARAVKARRRISSTVKAIIE*******************SDFLEILLCVDTLSEDEKVSFVLDSLLGGYETTSLLMALVVHFLGQSPTALEQLKLEHQT**********LNWEDYKKMDFTQNVINEALRYGNVVKFVHRKALKDVKYRDYLIPSGWKVLPVFTAVHLDPSLHANAFQFHPWRWENQDQTCKKFTPFGGGSRCCPGSELAKVEVAFFLHHLVQNFRWRNQDEDQPIAYPYVEFKRGLVL**************
MAEFVSFWLLLLVSMLLAFVLGLIILNHNLPLFLRLSHVPKGTFGLPLLGETLSFLKPHSSNSLGTFLQDHCSRYGKVFKSHLFFTPTVVSCDAELNYFILQNEGKLFQCSYPKTIPGILGNLSMLVAVGDTHRRLRNAALSLVTITKSKPEFLNDIENFAIQILDSWKDKPQVIFCEEARKFTFNVIVKQVLGLTPEEPETTKILEDFLTFMKGLISLPLYIPGTPYARAVKARRRISSTVKAIIEK****************KNSDFLEILLCVDTLSEDEKVSFVLDSLLGGYETTSLLMALVVHFLGQSPTALEQLKLEHQTIRSMKQNNEHLNWEDYKKMDFTQNVINEALRYGNVVKFVHRKALKDVKYRDYLIPSGWKVLPVFTAVHLDPSLHANAFQFHPWRWENQDQTCKKFTPFGGGSRCCPGSELAKVEVAFFLHHLVQNFRWRNQDEDQPIAYPYVEFKRGLVLNVECC*********
*AEFVSFWLLLLVSMLLAFVLGLIILNHNLPLFLRLSHVPKGTFGLPLLGETLSFLKPHSSNSLGTFLQDHCSRYGKVFKSHLFFTPTVVSCDAELNYFILQNEGKLFQCSYPKTIPGILGNLSMLVAVGDTHRRLRNAALSLVTITKSKPEFLNDIENFAIQILDSWKDKPQVIFCEEARKFTFNVIVKQVLGLTPEEPETTKILEDFLTFMKGLISLPLYIPGTPYARAVKARRRISSTVKAIIEKRRRRSS*********KKNSDFLEILLCVDTLSEDEKVSFVLDSLLGGYETTSLLMALVVHFLGQSPTALEQLKLEHQTIRSMKQNNEHLNWEDYKKMDFTQNVINEALRYGNVVKFVHRKALKDVKYRDYLIPSGWKVLPVFTAVHLDPSLHANAFQFHPWRWENQDQTCKKFTPFGGGSRCCPGSELAKVEVAFFLHHLVQNFRWRNQDEDQPIAYPYVEFKRGLVLNVECC*********
iiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAEFVSFWLLLLVSMLLAFVLGLIILNHNLPLFLRLSHVPKGTFGLPLLGETLSFLKPHSSNSLGTFLQDHCSRYGKVFKSHLFFTPTVVSCDAELNYFILQNEGKLFQCSYPKTIPGILGNLSMLVAVGDTHRRLRNAALSLVTITKSKPEFLNDIENFAIQILDSWKDKPQVIFCEEARKFTFNVIVKQVLGLTPEEPETTKILEDFLTFMKGLISLPLYIPGTPYARAVKARRRISSTVKAIIEKRRRRSSNNNSADNSEKKNSDFLEILLCVDTLSEDEKVSFVLDSLLGGYETTSLLMALVVHFLGQSPTALEQLKLEHQTIRSMKQNNEHLNWEDYKKMDFTQNVINEALRYGNVVKFVHRKALKDVKYRDYLIPSGWKVLPVFTAVHLDPSLHANAFQFHPWRWENQDQTCKKFTPFGGGSRCCPGSELAKVEVAFFLHHLVQNFRWRNQDEDQPIAYPYVEFKRGLVLNVECCSDEAENKQH
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query490 2.2.26 [Sep-21-2011]
Q6F4F5480 Cytochrome P450 724B1 OS= yes no 0.912 0.931 0.678 0.0
O64989513 Cytochrome P450 90B1 OS=A yes no 0.9 0.859 0.442 1e-117
Q42569472 Cytochrome P450 90A1 OS=A no no 0.855 0.887 0.405 3e-94
Q50EK6481 Abietadienol/abietadienal N/A no 0.879 0.896 0.385 3e-90
Q9M066524 3-epi-6-deoxocathasterone no no 0.893 0.835 0.378 3e-85
Q50EK5487 Cytochrome P450 720B2 OS= N/A no 0.885 0.891 0.385 7e-85
Q94IA6491 3-epi-6-deoxocathasterone no no 0.883 0.881 0.362 7e-81
Q94IW5490 Cytochrome P450 90D2 OS=O no no 0.895 0.895 0.331 3e-75
Q43147464 Cytochrome P450 85A1 OS=S N/A no 0.859 0.907 0.339 5e-73
Q7XU38514 Cytochrome P450 87A3 OS=O no no 0.867 0.826 0.330 8e-72
>sp|Q6F4F5|C724B_ORYSJ Cytochrome P450 724B1 OS=Oryza sativa subsp. japonica GN=CYP724B1 PE=1 SV=1 Back     alignment and function desciption
 Score =  634 bits (1634), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/466 (67%), Positives = 370/466 (79%), Gaps = 19/466 (4%)

Query: 27  NHNLPLFLRLSHVPKGTFGLPLLGETLSFLKPHSSNSLGTFLQDHCSRYGKVFKSHLFFT 86
           +H LPL L     PKG+FG PLLGETL FL PH+SN+LG+FL+DHCSRYG+VFKSHLF T
Sbjct: 24  SHFLPLLLN-PKAPKGSFGWPLLGETLRFLSPHASNTLGSFLEDHCSRYGRVFKSHLFCT 82

Query: 87  PTVVSCDAELNYFILQNEGKLFQCSYPKTIPGILGNLSMLVAVGDTHRRLRNAALSLVTI 146
           PT+VSCD ELN+FILQNE +LFQCSYP+ I GILG  SMLV +G+ H+RLRN AL+LVT 
Sbjct: 83  PTIVSCDQELNHFILQNEERLFQCSYPRPIHGILGKSSMLVVLGEDHKRLRNLALALVTS 142

Query: 147 TKSKPEFLNDIENFAIQILDSW----KDKPQV---IFCEEARKFTFNVIVKQVLGLTPEE 199
           TK KP +L DIE  A+ I+ SW    KDK  V    FCEEARKF F+VIVKQVLGL+PEE
Sbjct: 143 TKLKPSYLGDIEKIALHIVGSWHGKSKDKGMVNVIAFCEEARKFAFSVIVKQVLGLSPEE 202

Query: 200 PETTKILEDFLTFMKGLISLPLYIPGTPYARAVKARRRISSTVKAIIEKRRRRSSNNNSA 259
           P T  ILEDFL FMKGLIS PLYIPGTPYA+AV+AR RISSTVK IIE+RR   S+N   
Sbjct: 203 PVTAMILEDFLAFMKGLISFPLYIPGTPYAKAVQARARISSTVKGIIEERRNAGSSNKG- 261

Query: 260 DNSEKKNSDFLEILLCVDTLSEDEKVSFVLDSLLGGYETTSLLMALVVHFLGQSPTALEQ 319
                   DFL++LL  + LS++EKVSFVLDSLLGGYETTSLL+++VV+FLGQS   LE 
Sbjct: 262 --------DFLDVLLSSNELSDEEKVSFVLDSLLGGYETTSLLISMVVYFLGQSAQDLEL 313

Query: 320 LKLEHQTIRSMKQNNEHLNWEDYKKMDFTQNVINEALRYGNVVKFVHRKALKDVKYRDYL 379
           +K EH+ IRS K+ +E L+ EDYKKM++TQ+VINEALR GN+VKFVHRKALKDV+Y++YL
Sbjct: 314 VKREHEGIRSKKEKDEFLSSEDYKKMEYTQHVINEALRCGNIVKFVHRKALKDVRYKEYL 373

Query: 380 IPSGWKVLPVFTAVHLDPSLHANAFQFHPWRWENQDQ-TCKKFTPFGGGSRCCPGSELAK 438
           IPSGWKVLPVF+AVHL+P LH NA QF P RWE   Q T KKFTPFGGG R CPGSELAK
Sbjct: 374 IPSGWKVLPVFSAVHLNPLLHGNAQQFQPCRWEGASQGTSKKFTPFGGGPRLCPGSELAK 433

Query: 439 VEVAFFLHHLVQNFRWRNQDEDQPIAYPYVEFKRGLVLNVE-CCSD 483
           VE AFFLHHLV N+RWR   +D P+AYPYVEF+RGL + +E  CS+
Sbjct: 434 VEAAFFLHHLVLNYRWRIDGDDIPMAYPYVEFQRGLPIEIEPLCSE 479
Involved in brassinosteroid biosynthesis. May catalyze a C6-oxidation step and may be involved to supply 6-deoxotyphasterol and typhasterol. Involved in internode elongation and seed development.
Oryza sativa subsp. japonica (taxid: 39947)
EC: 1EC: .EC: 1EC: 4EC: .EC: -EC: .EC: -
>sp|O64989|C90B1_ARATH Cytochrome P450 90B1 OS=Arabidopsis thaliana GN=CYP90B1 PE=1 SV=2 Back     alignment and function description
>sp|Q42569|C90A1_ARATH Cytochrome P450 90A1 OS=Arabidopsis thaliana GN=CYP90A1 PE=2 SV=1 Back     alignment and function description
>sp|Q50EK6|C72B1_PINTA Abietadienol/abietadienal oxidase OS=Pinus taeda GN=CYP720B1 PE=1 SV=1 Back     alignment and function description
>sp|Q9M066|C90C1_ARATH 3-epi-6-deoxocathasterone 23-monooxygenase OS=Arabidopsis thaliana GN=ROT3 PE=2 SV=3 Back     alignment and function description
>sp|Q50EK5|C72B2_PINTA Cytochrome P450 720B2 OS=Pinus taeda GN=CYP720B2 PE=2 SV=1 Back     alignment and function description
>sp|Q94IA6|C90D1_ARATH 3-epi-6-deoxocathasterone 23-monooxygenase OS=Arabidopsis thaliana GN=CYP90D1 PE=2 SV=1 Back     alignment and function description
>sp|Q94IW5|C90D2_ORYSJ Cytochrome P450 90D2 OS=Oryza sativa subsp. japonica GN=CYP90D2 PE=1 SV=1 Back     alignment and function description
>sp|Q43147|C85A1_SOLLC Cytochrome P450 85A1 OS=Solanum lycopersicum GN=CYP85A1 PE=2 SV=1 Back     alignment and function description
>sp|Q7XU38|C87A3_ORYSJ Cytochrome P450 87A3 OS=Oryza sativa subsp. japonica GN=CYP87A3 PE=2 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query490
225447454472 PREDICTED: cytochrome P450 724B1 [Vitis 0.920 0.955 0.829 0.0
147787382472 hypothetical protein VITISV_004298 [Viti 0.920 0.955 0.827 0.0
224131930445 cytochrome P450 [Populus trichocarpa] gi 0.904 0.995 0.807 0.0
255567210523 cytochrome P450, putative [Ricinus commu 0.906 0.848 0.817 0.0
119224822480 cytochrome P450 [Solanum lycopersicum] 0.944 0.964 0.730 0.0
115458894480 Os04g0469800 [Oryza sativa Japonica Grou 0.912 0.931 0.678 1e-179
326501560476 predicted protein [Hordeum vulgare subsp 0.912 0.939 0.682 1e-178
414586807481 TPA: putative cytochrome P450 superfamil 0.918 0.935 0.671 1e-177
195623218485 cytochrome P450 CYP724B3 [Zea mays] 0.918 0.927 0.667 1e-177
219362491481 uncharacterized protein LOC100217085 [Ze 0.918 0.935 0.671 1e-177
>gi|225447454|ref|XP_002266691.1| PREDICTED: cytochrome P450 724B1 [Vitis vinifera] gi|296085072|emb|CBI28487.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  797 bits (2058), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/458 (82%), Positives = 418/458 (91%), Gaps = 7/458 (1%)

Query: 25  ILNHNLPLFLRLSHVPKGTFGLPLLGETLSFLKPHSSNSLGTFLQDHCSRYGKVFKSHLF 84
           ILNH LPLF +L HVPKGTFG PLLGETL FLKPH SNSLG FLQD CSR+GKVFKSHLF
Sbjct: 21  ILNHFLPLFFKLGHVPKGTFGWPLLGETLCFLKPHPSNSLGAFLQDRCSRFGKVFKSHLF 80

Query: 85  FTPTVVSCDAELNYFILQNEGKLFQCSYPKTIPGILGNLSMLVAVGDTHRRLRNAALSLV 144
           F+PTVVSCD ELNYFILQNE KLFQCSYPK I GILG +SMLVAVGDTH+RLRN ALSLV
Sbjct: 81  FSPTVVSCDQELNYFILQNEDKLFQCSYPKPIHGILGKISMLVAVGDTHKRLRNVALSLV 140

Query: 145 TITKSKPEFLNDIENFAIQILDSWKDKPQVIFCEEARKFTFNVIVKQVLGLTPEEPETTK 204
           T TK+KPEFLN++E  AI++LDSWKDKPQ+IFCEEARKFTFNVIVKQVLGLTP++P+T K
Sbjct: 141 TTTKTKPEFLNEVERAAIRVLDSWKDKPQIIFCEEARKFTFNVIVKQVLGLTPDDPQTAK 200

Query: 205 ILEDFLTFMKGLISLPLYIPGTPYARAVKARRRISSTVKAIIEKRRRRSSNNNSADNSEK 264
           IL+DFLTFM+GLISLPLYIPGTPYARAV+AR RISSTVKAIIE+RRR       A+NS K
Sbjct: 201 ILQDFLTFMRGLISLPLYIPGTPYARAVQARIRISSTVKAIIEERRR------DAENSSK 254

Query: 265 KNSDFLEILLCVDTLSEDEKVSFVLDSLLGGYETTSLLMALVVHFLGQSPTALEQLKLEH 324
           ++ DFLEILLCVDTLSEDEKVSFVLDSLLGGYETTSLLMAL VHFLG+SPTALEQLKLEH
Sbjct: 255 RD-DFLEILLCVDTLSEDEKVSFVLDSLLGGYETTSLLMALAVHFLGKSPTALEQLKLEH 313

Query: 325 QTIRSMKQNNEHLNWEDYKKMDFTQNVINEALRYGNVVKFVHRKALKDVKYRDYLIPSGW 384
           Q IRSMKQ +++LNW+DYK+MDFTQNVI+EALR GNVVKFVHRKALKDVK+RDYLIPSGW
Sbjct: 314 QKIRSMKQKDDYLNWDDYKRMDFTQNVIHEALRCGNVVKFVHRKALKDVKFRDYLIPSGW 373

Query: 385 KVLPVFTAVHLDPSLHANAFQFHPWRWENQDQTCKKFTPFGGGSRCCPGSELAKVEVAFF 444
           KVLPVF+AVHLDPSLHA+A QFHPWRWE +DQTCKKFTPFGGGSRCCPGSELAK++VAFF
Sbjct: 374 KVLPVFSAVHLDPSLHASALQFHPWRWEGRDQTCKKFTPFGGGSRCCPGSELAKIQVAFF 433

Query: 445 LHHLVQNFRWRNQDEDQPIAYPYVEFKRGLVLNVECCS 482
           LHHLVQNFRW  +D DQP AYPYVEF+RGL LN++ CS
Sbjct: 434 LHHLVQNFRWNTKDGDQPFAYPYVEFQRGLALNLDHCS 471

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|147787382|emb|CAN62336.1| hypothetical protein VITISV_004298 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224131930|ref|XP_002321213.1| cytochrome P450 [Populus trichocarpa] gi|222861986|gb|EEE99528.1| cytochrome P450 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255567210|ref|XP_002524586.1| cytochrome P450, putative [Ricinus communis] gi|223536139|gb|EEF37794.1| cytochrome P450, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|119224822|dbj|BAF41218.1| cytochrome P450 [Solanum lycopersicum] Back     alignment and taxonomy information
>gi|115458894|ref|NP_001053047.1| Os04g0469800 [Oryza sativa Japonica Group] gi|68565169|sp|Q6F4F5.1|C724B_ORYSJ RecName: Full=Cytochrome P450 724B1; AltName: Full=Dwarf protein 11; AltName: Full=OsDWARF11 gi|50058152|dbj|BAD27424.1| P450 [Oryza sativa Japonica Group] gi|113564618|dbj|BAF14961.1| Os04g0469800 [Oryza sativa Japonica Group] gi|116310016|emb|CAH67041.1| OSIGBa0124N08.3 [Oryza sativa Indica Group] gi|215741256|dbj|BAG97751.1| unnamed protein product [Oryza sativa Japonica Group] gi|215767552|dbj|BAG99780.1| unnamed protein product [Oryza sativa Japonica Group] gi|218195021|gb|EEC77448.1| hypothetical protein OsI_16255 [Oryza sativa Indica Group] gi|222629029|gb|EEE61161.1| hypothetical protein OsJ_15129 [Oryza sativa Japonica Group] Back     alignment and taxonomy information
>gi|326501560|dbj|BAK02569.1| predicted protein [Hordeum vulgare subsp. vulgare] Back     alignment and taxonomy information
>gi|414586807|tpg|DAA37378.1| TPA: putative cytochrome P450 superfamily protein [Zea mays] Back     alignment and taxonomy information
>gi|195623218|gb|ACG33439.1| cytochrome P450 CYP724B3 [Zea mays] Back     alignment and taxonomy information
>gi|219362491|ref|NP_001136926.1| uncharacterized protein LOC100217085 [Zea mays] gi|194697654|gb|ACF82911.1| unknown [Zea mays] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query490
UNIPROTKB|Q6F4F5480 CYP724B1 "Cytochrome P450 724B 0.918 0.937 0.663 8.4e-161
TAIR|locus:2101704513 DWF4 "DWARF 4" [Arabidopsis th 0.408 0.389 0.504 1.5e-106
UNIPROTKB|Q5CCK3506 OsDWARF4 "Cytochrome P450" [Or 0.912 0.883 0.425 1.4e-101
UNIPROTKB|Q8H848502 OJ1626B05.9 "Putative steroid 0.912 0.890 0.425 1.4e-101
TAIR|locus:2145738367 CYP724A1 ""cytochrome P450, fa 0.530 0.708 0.473 4.2e-98
TAIR|locus:2166439472 CPD "CONSTITUTIVE PHOTOMORPHOG 0.857 0.889 0.399 4.3e-86
TAIR|locus:2115220524 ROT3 "ROTUNDIFOLIA 3" [Arabido 0.893 0.835 0.369 1.5e-76
TAIR|locus:2091571491 CYP90D1 ""cytochrome P450, fam 0.883 0.881 0.349 7.5e-73
UNIPROTKB|Q8GSQ1469 CYP85A1 "Cytochrome P450 85A1" 0.908 0.948 0.321 2.6e-63
TAIR|locus:2098802465 BR6OX2 "brassinosteroid-6-oxid 0.863 0.909 0.341 2.3e-62
UNIPROTKB|Q6F4F5 CYP724B1 "Cytochrome P450 724B1" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
 Score = 1566 (556.3 bits), Expect = 8.4e-161, P = 8.4e-161
 Identities = 311/469 (66%), Positives = 365/469 (77%)

Query:    24 IILNHNLPLFLRLSHVPKGTFGLPLLGETLSFLKPHSSNSLGTFLQDHCSRYGKVFKSHL 83
             ++L+H LPL L     PKG+FG PLLGETL FL PH+SN+LG+FL+DHCSRYG+VFKSHL
Sbjct:    21 LVLSHFLPLLLN-PKAPKGSFGWPLLGETLRFLSPHASNTLGSFLEDHCSRYGRVFKSHL 79

Query:    84 FFTPTVVSCDAELNYFILQNEGKLFQCSYPKTIPGILGNLSMLVAVGDTHRRLRNAALSL 143
             F TPT+VSCD ELN+FILQNE +LFQCSYP+ I GILG  SMLV +G+ H+RLRN AL+L
Sbjct:    80 FCTPTIVSCDQELNHFILQNEERLFQCSYPRPIHGILGKSSMLVVLGEDHKRLRNLALAL 139

Query:   144 VTITKSKPEFLNDIENFAIQILDSW----KDKPQV---IFCEEARKFTFNVIVKQVLGLT 196
             VT TK KP +L DIE  A+ I+ SW    KDK  V    FCEEARKF F+VIVKQVLGL+
Sbjct:   140 VTSTKLKPSYLGDIEKIALHIVGSWHGKSKDKGMVNVIAFCEEARKFAFSVIVKQVLGLS 199

Query:   197 PEEPETTKILEDFLTFMKGLISLPLYIPGTPYARAVKARRRISSTVKAIIXXXXXXXXXX 256
             PEEP T  ILEDFL FMKGLIS PLYIPGTPYA+AV+AR RISSTVK II          
Sbjct:   200 PEEPVTAMILEDFLAFMKGLISFPLYIPGTPYAKAVQARARISSTVKGIIEERRNAGSSN 259

Query:   257 XXXXXXXXXXXXFLEILLCVDTLSEDEKVSFVLDSLLGGYETTSLLMALVVHFLGQSPTA 316
                         FL++LL  + LS++EKVSFVLDSLLGGYETTSLL+++VV+FLGQS   
Sbjct:   260 KGD---------FLDVLLSSNELSDEEKVSFVLDSLLGGYETTSLLISMVVYFLGQSAQD 310

Query:   317 LEQLKLEHQTIRSMKQNNEHLNWEDYKKMDFTQNVINEALRYGNVVKFVHRKALKDVKYR 376
             LE +K EH+ IRS K+ +E L+ EDYKKM++TQ+VINEALR GN+VKFVHRKALKDV+Y+
Sbjct:   311 LELVKREHEGIRSKKEKDEFLSSEDYKKMEYTQHVINEALRCGNIVKFVHRKALKDVRYK 370

Query:   377 DYLIPSGWKVLPVFTAVHLDPSLHANAFQFHPWRWENQDQ-TCKKFTPFGGGSRCCPGSE 435
             +YLIPSGWKVLPVF+AVHL+P LH NA QF P RWE   Q T KKFTPFGGG R CPGSE
Sbjct:   371 EYLIPSGWKVLPVFSAVHLNPLLHGNAQQFQPCRWEGASQGTSKKFTPFGGGPRLCPGSE 430

Query:   436 LAKVEVAFFLHHLVQNFRWRNQDEDQPIAYPYVEFKRGLVLNVE-CCSD 483
             LAKVE AFFLHHLV N+RWR   +D P+AYPYVEF+RGL + +E  CS+
Sbjct:   431 LAKVEAAFFLHHLVLNYRWRIDGDDIPMAYPYVEFQRGLPIEIEPLCSE 479
GO:0004497 "monooxygenase activity" evidence=ISS
GO:0007275 "multicellular organismal development" evidence=IMP
GO:0009647 "skotomorphogenesis" evidence=IMP
GO:0016132 "brassinosteroid biosynthetic process" evidence=IMP
GO:0020037 "heme binding" evidence=ISS
TAIR|locus:2101704 DWF4 "DWARF 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q5CCK3 OsDWARF4 "Cytochrome P450" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q8H848 OJ1626B05.9 "Putative steroid 22-alpha-hydroxylase" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2145738 CYP724A1 ""cytochrome P450, family 724, subfamily A, polypeptide 1"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2166439 CPD "CONSTITUTIVE PHOTOMORPHOGENIC DWARF" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2115220 ROT3 "ROTUNDIFOLIA 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2091571 CYP90D1 ""cytochrome P450, family 90, subfamily D, polypeptide 1"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q8GSQ1 CYP85A1 "Cytochrome P450 85A1" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2098802 BR6OX2 "brassinosteroid-6-oxidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q6F4F5C724B_ORYSJ1, ., 1, 4, ., -, ., -0.67810.91220.9312yesno
O64989C90B1_ARATH1, ., 1, 4, ., -, ., -0.44270.90.8596yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.13.78LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00029049001
SubName- Full=Chromosome chr12 scaffold_47, whole genome shotgun sequence; (472 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00036865001
SubName- Full=Chromosome chr4 scaffold_83, whole genome shotgun sequence; (486 aa)
  •  • •0.905
GSVIVG00029273001
SubName- Full=Chromosome chr13 scaffold_48, whole genome shotgun sequence; (483 aa)
  •  • •0.904
GSVIVG00021458001
SubName- Full=Chromosome chr8 scaffold_23, whole genome shotgun sequence; (257 aa)
     •  0.899
GSVIVG00021217001
SubName- Full=Chromosome chr1 scaffold_22, whole genome shotgun sequence; (537 aa)
     •  0.800

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query490
PLN02500490 PLN02500, PLN02500, cytochrome P450 90B1 1e-166
PLN03141452 PLN03141, PLN03141, 3-epi-6-deoxocathasterone 23-m 1e-129
PLN02987472 PLN02987, PLN02987, Cytochrome P450, family 90, su 1e-125
PLN02774463 PLN02774, PLN02774, brassinosteroid-6-oxidase 6e-99
PLN02302490 PLN02302, PLN02302, ent-kaurenoic acid oxidase 1e-82
PLN02196463 PLN02196, PLN02196, abscisic acid 8'-hydroxylase 1e-76
pfam00067461 pfam00067, p450, Cytochrome P450 5e-49
COG2124411 COG2124, CypX, Cytochrome P450 [Secondary metaboli 6e-43
PLN00168519 PLN00168, PLN00168, Cytochrome P450; Provisional 3e-19
PLN03112514 PLN03112, PLN03112, cytochrome P450 family protein 4e-18
PLN02183516 PLN02183, PLN02183, ferulate 5-hydroxylase 1e-15
PLN02290516 PLN02290, PLN02290, cytokinin trans-hydroxylase 3e-14
PTZ00404482 PTZ00404, PTZ00404, cytochrome P450; Provisional 6e-14
PLN02936489 PLN02936, PLN02936, epsilon-ring hydroxylase 1e-13
PLN02738633 PLN02738, PLN02738, carotene beta-ring hydroxylase 2e-11
PLN02655466 PLN02655, PLN02655, ent-kaurene oxidase 2e-10
PLN03234499 PLN03234, PLN03234, cytochrome P450 83B1; Provisio 5e-09
PLN00110504 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F 2e-08
PLN02966502 PLN02966, PLN02966, cytochrome P450 83A1 1e-07
PLN02687517 PLN02687, PLN02687, flavonoid 3'-monooxygenase 2e-07
PLN02169500 PLN02169, PLN02169, fatty acid (omega-1)-hydroxyla 5e-07
PLN02394503 PLN02394, PLN02394, trans-cinnamate 4-monooxygenas 7e-07
PLN02971543 PLN02971, PLN02971, tryptophan N-hydroxylase 8e-06
PLN03195516 PLN03195, PLN03195, fatty acid omega-hydroxylase; 0.003
>gnl|CDD|215276 PLN02500, PLN02500, cytochrome P450 90B1 Back     alignment and domain information 
 Score =  478 bits (1231), Expect = e-166
 Identities = 222/491 (45%), Positives = 315/491 (64%), Gaps = 19/491 (3%)

Query: 1   MAEFVSFWLLLLVSMLLAFVLGLIILNHNLPLFLRLSHVPKGTFGLPLLGETLSFLKPHS 60
           M       L LL S+L   ++   IL    P   R + +P G  G P LGET+ +LKP+S
Sbjct: 4   MMSHTELLLFLLPSILSLLLV--FILTKRRPKQKRFN-LPPGNMGWPFLGETIGYLKPYS 60

Query: 61  SNSLGTFLQDHCSRYGKVFKSHLFFTPTVVSCDAELNYFILQNEGKLFQCSYPKTIPGIL 120
           + S+G F++ H SRYGK+++S+LF  PT+VS DA LN FILQNEG+LF+CSYP++I GIL
Sbjct: 61  ATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYPRSIGGIL 120

Query: 121 GNLSMLVAVGDTHRRLRNAALSLVTITKSKPEFLNDIENFAIQILDSWKDKPQVIFCEEA 180
           G  SMLV VGD HR +R+ +L+ ++  + +   L ++E   + +LDSWK+       +EA
Sbjct: 121 GKWSMLVLVGDMHRDMRSISLNFLSHARLRTHLLKEVERHTLLVLDSWKENSTFSAQDEA 180

Query: 181 RKFTFNVIVKQVLGLTPEEPETTKILEDFLTFMKGLISLPLYIPGTPYARAVKARRRISS 240
           +KFTFN++ K ++ + P E ET ++ ++++TFMKG++S PL  PGT Y +A+K+R    +
Sbjct: 181 KKFTFNLMAKHIMSMDPGEEETEQLKKEYVTFMKGVVSAPLNFPGTAYRKALKSR----A 236

Query: 241 TVKAIIEKRRRRSSNNNSADNSEKKNSDFLEILLCVDTLSEDEKVSFVLDSLLGGYETTS 300
           T+   IE++          ++   +  D L  +L    LS ++ +  +L  L  G+ET+S
Sbjct: 237 TILKFIERKMEERIEKLKEEDESVEEDDLLGWVLKHSNLSTEQILDLILSLLFAGHETSS 296

Query: 301 LLMALVVHFLGQSPTALEQLKLEHQTI-RSMKQNNE-HLNWEDYKKMDFTQNVINEALRY 358
           + +AL + FL   P A+++L+ EH  I R+ KQ+ E  LNWEDYKKM+FTQ VINE LR 
Sbjct: 297 VAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKMEFTQCVINETLRL 356

Query: 359 GNVVKFVHRKALKDVKYRDYLIPSGWKVLPVFTAVHLDPSLHANAFQFHPWRWENQDQ-- 416
           GNVV+F+HRKALKDV+Y+ Y IPSGWKVLPV  AVHLD SL+     F+PWRW+  +   
Sbjct: 357 GNVVRFLHRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPWRWQQNNNRG 416

Query: 417 --------TCKKFTPFGGGSRCCPGSELAKVEVAFFLHHLVQNFRWRNQDEDQPIAYPYV 468
                   T   F PFGGG R C GSELAK+E+A F+HHLV NF W   + DQ  A+P+V
Sbjct: 417 GSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQAFAFPFV 476

Query: 469 EFKRGLVLNVE 479
           +F +GL + V 
Sbjct: 477 DFPKGLPIRVR 487

Length = 490
>gnl|CDD|215600 PLN03141, PLN03141, 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional Back     alignment and domain information
>gnl|CDD|166628 PLN02987, PLN02987, Cytochrome P450, family 90, subfamily A Back     alignment and domain information
>gnl|CDD|178373 PLN02774, PLN02774, brassinosteroid-6-oxidase Back     alignment and domain information
>gnl|CDD|215171 PLN02302, PLN02302, ent-kaurenoic acid oxidase Back     alignment and domain information
>gnl|CDD|177847 PLN02196, PLN02196, abscisic acid 8'-hydroxylase Back     alignment and domain information
>gnl|CDD|215689 pfam00067, p450, Cytochrome P450 Back     alignment and domain information
>gnl|CDD|225035 COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|215086 PLN00168, PLN00168, Cytochrome P450; Provisional Back     alignment and domain information
>gnl|CDD|215583 PLN03112, PLN03112, cytochrome P450 family protein; Provisional Back     alignment and domain information
>gnl|CDD|165828 PLN02183, PLN02183, ferulate 5-hydroxylase Back     alignment and domain information
>gnl|CDD|215164 PLN02290, PLN02290, cytokinin trans-hydroxylase Back     alignment and domain information
>gnl|CDD|173595 PTZ00404, PTZ00404, cytochrome P450; Provisional Back     alignment and domain information
>gnl|CDD|178524 PLN02936, PLN02936, epsilon-ring hydroxylase Back     alignment and domain information
>gnl|CDD|215393 PLN02738, PLN02738, carotene beta-ring hydroxylase Back     alignment and domain information
>gnl|CDD|215354 PLN02655, PLN02655, ent-kaurene oxidase Back     alignment and domain information
>gnl|CDD|178773 PLN03234, PLN03234, cytochrome P450 83B1; Provisional Back     alignment and domain information
>gnl|CDD|177725 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F3'5'H); Provisional Back     alignment and domain information
>gnl|CDD|178550 PLN02966, PLN02966, cytochrome P450 83A1 Back     alignment and domain information
>gnl|CDD|215371 PLN02687, PLN02687, flavonoid 3'-monooxygenase Back     alignment and domain information
>gnl|CDD|177826 PLN02169, PLN02169, fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase Back     alignment and domain information
>gnl|CDD|215221 PLN02394, PLN02394, trans-cinnamate 4-monooxygenase Back     alignment and domain information
>gnl|CDD|166612 PLN02971, PLN02971, tryptophan N-hydroxylase Back     alignment and domain information
>gnl|CDD|215627 PLN03195, PLN03195, fatty acid omega-hydroxylase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 490
PLN02500490 cytochrome P450 90B1 100.0
KOG0156489 consensus Cytochrome P450 CYP2 subfamily [Secondar 100.0
PLN02774463 brassinosteroid-6-oxidase 100.0
KOG0158499 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subf 100.0
PLN02196463 abscisic acid 8'-hydroxylase 100.0
PLN03141452 3-epi-6-deoxocathasterone 23-monooxygenase; Provis 100.0
PLN02971543 tryptophan N-hydroxylase 100.0
PLN02302490 ent-kaurenoic acid oxidase 100.0
PLN02183516 ferulate 5-hydroxylase 100.0
KOG0157497 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfami 100.0
PLN02987472 Cytochrome P450, family 90, subfamily A 100.0
PLN02290516 cytokinin trans-hydroxylase 100.0
PLN00168519 Cytochrome P450; Provisional 100.0
PLN02687517 flavonoid 3'-monooxygenase 100.0
PTZ00404482 cytochrome P450; Provisional 100.0
PLN03234499 cytochrome P450 83B1; Provisional 100.0
PLN00110504 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional 100.0
PLN02394503 trans-cinnamate 4-monooxygenase 100.0
PLN02169500 fatty acid (omega-1)-hydroxylase/midchain alkane h 100.0
PLN03112514 cytochrome P450 family protein; Provisional 100.0
PLN02966502 cytochrome P450 83A1 100.0
PLN02738633 carotene beta-ring hydroxylase 100.0
PF00067463 p450: Cytochrome P450 p450 superfamily signature b 100.0
KOG0159519 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 100.0
PLN03018534 homomethionine N-hydroxylase 100.0
PLN02655466 ent-kaurene oxidase 100.0
KOG0684486 consensus Cytochrome P450 [Secondary metabolites b 100.0
PLN03195516 fatty acid omega-hydroxylase; Provisional 100.0
PLN02936489 epsilon-ring hydroxylase 100.0
PLN02426502 cytochrome P450, family 94, subfamily C protein 100.0
PLN02648480 allene oxide synthase 100.0
COG2124411 CypX Cytochrome P450 [Secondary metabolites biosyn 100.0
>PLN02500 cytochrome P450 90B1 Back     alignment and domain information 
Probab=100.00  E-value=3.6e-79  Score=601.43  Aligned_cols=445  Identities=47%  Similarity=0.873  Sum_probs=365.6

Q ss_pred             hhhcCCCCCCCCCCccccccccccccCCCCChhhHHHHHHHhcCCceEEcccCccEEEEcChHHHHHHHhcCCCCcccCC
Q 011242           33 FLRLSHVPKGTFGLPLLGETLSFLKPHSSNSLGTFLQDHCSRYGKVFKSHLFFTPTVVSCDAELNYFILQNEGKLFQCSY  112 (490)
Q Consensus        33 ~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~l~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~  112 (490)
                      +++..+.||||+++|++||++.++......++..++.+++++||++|++++++.+.|+++||+.+++++.+++..+..++
T Consensus        33 ~~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~  112 (490)
T PLN02500         33 KQKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSY  112 (490)
T ss_pred             ccCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeC
Confidence            45556789999999999998765432223467788999999999999999999999999999999999998877775444


Q ss_pred             CCchhhhhcccccccccChhhHHHHHHHhhhccccccchhhHHHHHHHHHHHHHhhcCCCcccHHHHHHHHHHHHHHHHH
Q 011242          113 PKTIPGILGNLSMLVAVGDTHRRLRNAALSLVTITKSKPEFLNDIENFAIQILDSWKDKPQVIFCEEARKFTFNVIVKQV  192 (490)
Q Consensus       113 ~~~~~~~~g~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~~  192 (490)
                      ......++|..+++..+|+.|+++|+++.+.|+...+...+.+.+.+.+..+++.|.++..+|+.+.+..++++++++++
T Consensus       113 ~~~~~~~~g~~~~~~~~g~~wr~~Rk~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~~  192 (490)
T PLN02500        113 PRSIGGILGKWSMLVLVGDMHRDMRSISLNFLSHARLRTHLLKEVERHTLLVLDSWKENSTFSAQDEAKKFTFNLMAKHI  192 (490)
T ss_pred             chHHHHHhCcccccccCCHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCCCCEEehHHHHHHHHHHHHHHH
Confidence            44444556654788889999999999999999988887335678888888888888777789999999999999999999


Q ss_pred             cCCCCCchhhhHHHHHHHHHHhhhhhccccCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCccCCcchHHHH
Q 011242          193 LGLTPEEPETTKILEDFLTFMKGLISLPLYIPGTPYARAVKARRRISSTVKAIIEKRRRRSSNNNSADNSEKKNSDFLEI  272 (490)
Q Consensus       193 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~dll~~  272 (490)
                      ||.+.++....++...+..........+.++|...+++..++.+.+.+++.+.++++++......    ......|+++.
T Consensus       193 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----~~~~~~d~l~~  268 (490)
T PLN02500        193 MSMDPGEEETEQLKKEYVTFMKGVVSAPLNFPGTAYRKALKSRATILKFIERKMEERIEKLKEED----ESVEEDDLLGW  268 (490)
T ss_pred             hCCCCCchHHHHHHHHHHHHHhhhhcchhcCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhhccc----CCCCcchHHHH
Confidence            99876543334444444444443333344456555566677788899999999988776433211    01124689999


Q ss_pred             hhccCCCChHHHHHHHHHHhhcchhchHHHHHHHHHHHhcCchHHHHHHHHHHHHhhhh--cCCCCCCHHhhcCCccHHH
Q 011242          273 LLCVDTLSEDEKVSFVLDSLLGGYETTSLLMALVVHFLGQSPTALEQLKLEHQTIRSMK--QNNEHLNWEDYKKMDFTQN  350 (490)
Q Consensus       273 ll~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~--~~~~~~~~~~l~~l~~l~a  350 (490)
                      +++...++++++++++.++++||+|||+++++|++++|++||++|+|+|+||+++.+..  ..+..++++++++||||+|
T Consensus       269 ll~~~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~a  348 (490)
T PLN02500        269 VLKHSNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKMEFTQC  348 (490)
T ss_pred             HHhccCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccCCCCCCCHHHhccCHHHHH
Confidence            99776799999999999999999999999999999999999999999999999987432  1234589999999999999


Q ss_pred             HHHhHhccCCCccccceeeccccccCCeeeCCCCEEEecccccccCCCCCCCCCCccCCCCCCCCC----------CCCC
Q 011242          351 VINEALRYGNVVKFVHRKALKDVKYRDYLIPSGWKVLPVFTAVHLDPSLHANAFQFHPWRWENQDQ----------TCKK  420 (490)
Q Consensus       351 ~i~E~lRl~~~~~~~~R~~~~~~~~~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~PeRf~~~~~----------~~~~  420 (490)
                      ||+||||+||+++.++|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||++++.          +...
T Consensus       349 vikEtlRl~P~~~~~~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~  428 (490)
T PLN02500        349 VINETLRLGNVVRFLHRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNN  428 (490)
T ss_pred             HHHHHHhcCCCccCeeeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCccccChhhccCCCcccccccccCCCCCC
Confidence            999999999999988899999999999999999999999999999999999999999999996432          2467


Q ss_pred             ccccCCCCCCCCChHHHHHHHHHHHHHHHHhceeeecCCCCccccCcccccCCceEEEEec
Q 011242          421 FTPFGGGSRCCPGSELAKVEVAFFLHHLVQNFRWRNQDEDQPIAYPYVEFKRGLVLNVECC  481 (490)
Q Consensus       421 ~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  481 (490)
                      |+|||+|+|.|+|++||.+|+++++++|+++|+|++.+++.....+...++++++|++++.
T Consensus       429 ~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  489 (490)
T PLN02500        429 FMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQAFAFPFVDFPKGLPIRVRRI  489 (490)
T ss_pred             CcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCcceecccccCCCCceEEEEeC
Confidence            9999999999999999999999999999999999998765444444456678999998763

>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02774 brassinosteroid-6-oxidase Back     alignment and domain information
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02196 abscisic acid 8'-hydroxylase Back     alignment and domain information
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional Back     alignment and domain information
>PLN02971 tryptophan N-hydroxylase Back     alignment and domain information
>PLN02302 ent-kaurenoic acid oxidase Back     alignment and domain information
>PLN02183 ferulate 5-hydroxylase Back     alignment and domain information
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism] Back     alignment and domain information
>PLN02987 Cytochrome P450, family 90, subfamily A Back     alignment and domain information
>PLN02290 cytokinin trans-hydroxylase Back     alignment and domain information
>PLN00168 Cytochrome P450; Provisional Back     alignment and domain information
>PLN02687 flavonoid 3'-monooxygenase Back     alignment and domain information
>PTZ00404 cytochrome P450; Provisional Back     alignment and domain information
>PLN03234 cytochrome P450 83B1; Provisional Back     alignment and domain information
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional Back     alignment and domain information
>PLN02394 trans-cinnamate 4-monooxygenase Back     alignment and domain information
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase Back     alignment and domain information
>PLN03112 cytochrome P450 family protein; Provisional Back     alignment and domain information
>PLN02966 cytochrome P450 83A1 Back     alignment and domain information
>PLN02738 carotene beta-ring hydroxylase Back     alignment and domain information
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry Back     alignment and domain information
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN03018 homomethionine N-hydroxylase Back     alignment and domain information
>PLN02655 ent-kaurene oxidase Back     alignment and domain information
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN03195 fatty acid omega-hydroxylase; Provisional Back     alignment and domain information
>PLN02936 epsilon-ring hydroxylase Back     alignment and domain information
>PLN02426 cytochrome P450, family 94, subfamily C protein Back     alignment and domain information
>PLN02648 allene oxide synthase Back     alignment and domain information
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query490
2ve3_A444 Retinoic Acid Bound Cyanobacterial Cyp120a1 Length 2e-38
1z10_A476 Crystal Structure Of Human Microsomal P450 2a6 With 3e-20
2pg6_A476 Crystal Structure Of Human Microsomal P450 2a6 L240 4e-20
2pg5_A476 Crystal Structure Of Human Microsomal P450 2a6 N297 4e-20
2pg7_A476 Crystal Structure Of Human Microsomal P450 2a6 N297 5e-20
3ebs_A476 Human Cytochrome P450 2a6 I208sI300FG301AS369G IN C 2e-19
2p85_A476 Structure Of Human Lung Cytochrome P450 2a13 With I 5e-18
1pq2_A476 Crystal Structure Of Human Drug Metabolizing Cytoch 1e-14
3ua1_A487 Crystal Structure Of The Cytochrome P4503a4-Bromoer 1e-14
1tqn_A486 Crystal Structure Of Human Microsomal P450 3a4 Leng 1e-14
1w0e_A485 Crystal Structure Of Human Cytochrome P450 3a4 Leng 1e-14
3tk3_A476 Cytochrome P450 2b4 Mutant L437a In Complex With 4- 3e-14
2q6n_A478 Structure Of Cytochrome P450 2b4 With Bound 1-(4- C 5e-14
1suo_A476 Structure Of Mammalian Cytochrome P450 2b4 With Bou 6e-14
1po5_A476 Structure Of Mammalian Cytochrome P450 2b4 Length = 6e-14
3c6g_A479 Crystal Structure Of Cyp2r1 In Complex With Vitamin 6e-14
3czh_A481 Crystal Structure Of Cyp2r1 In Complex With Vitamin 7e-14
4h1n_A479 Crystal Structure Of P450 2b4 F297a Mutant In Compl 7e-14
4gqs_A477 Structure Of Human Microsomal Cytochrome P450 (cyp) 1e-13
3dbg_A467 Crystal Structure Of Cytochrome P450 170a1 (Cyp170a 1e-13
1r9o_A477 Crystal Structure Of P4502c9 With Flurbiprofen Boun 1e-12
1dt6_A473 Structure Of Mammalian Cytochrome P450 2c5 Length = 1e-12
1og2_A475 Structure Of Human Cytochrome P450 Cyp2c9 Length = 1e-12
3mzs_A486 Crystal Structure Of Cytochrome P450 Cyp11a1 In Com 7e-12
3n9y_A487 Crystal Structure Of Human Cyp11a1 In Complex With 5e-11
3na0_A471 Crystal Structure Of Human Cyp11a1 In Complex With 6e-11
3e4e_A476 Human Cytochrome P450 2e1 In Complex With The Inhib 9e-11
3hf2_A482 Crystal Structure Of The I401p Mutant Of Cytochrome 1e-10
3k9v_A482 Crystal Structure Of Rat Mitochondrial P450 24a1 S5 3e-10
3qz1_A496 Crystal Structure Of Bovine Steroid Of 21-Hydroxyla 3e-10
3qm4_A479 Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Compl 4e-10
1zoa_A473 Crystal Structure Of A328v Mutant Of The Heme Domai 7e-10
3cbd_A455 Directed Evolution Of Cytochrome P450 Bm3, To Octan 7e-10
3kx5_A470 Crystal Structure Of Bacillus Megaterium Bm3 Heme D 9e-10
2f9q_A479 Crystal Structure Of Human Cytochrome P450 2d6 Leng 1e-09
3kx4_A470 Crystal Structure Of Bacillus Megaterium Bm3 Heme D 1e-09
3psx_A487 Crystal Structure Of The Kt2 Mutant Of Cytochrome P 2e-09
3npl_A470 Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme D 2e-09
2ij2_A470 Atomic Structure Of The Heme Domain Of Flavocytochr 2e-09
2hpd_A471 Crystal Structure Of Hemoprotein Domain Of P450bm-3 2e-09
3ben_A470 Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine 2e-09
3kx3_A470 Crystal Structure Of Bacillus Megaterium Bm3 Heme D 2e-09
1jpz_A473 Crystal Structure Of A Complex Of The Heme Domain O 2e-09
2nnb_A471 The Q403k Mutnat Heme Domain Of Flavocytochrome P45 2e-09
2uwh_A458 Cytochrome P450 Bm3 Mutant In Complex With Palmitic 2e-09
2x7y_A455 P450 Bm3 F87a In Complex With Dmso Length = 455 2e-09
1bvy_A458 Complex Of The Heme And Fmn-Binding Domains Of The 2e-09
2bmh_A455 Modeling Protein-Substrate Interactions In The Heme 2e-09
3m4v_A482 Crystal Structure Of The A330p Mutant Of Cytochrome 3e-09
1zo4_A473 Crystal Structure Of A328s Mutant Of The Heme Domai 3e-09
2ij4_A470 Structure Of The A264k Mutant Of Cytochrome P450 Bm 3e-09
3ekf_A470 Crystal Structure Of The A264q Heme Domain Of Cytoc 3e-09
1smi_A471 A Single Mutation Of P450 Bm3 Induces The Conformat 4e-09
4duf_A471 Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Seroto 4e-09
4duc_A472 Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand Leng 4e-09
4dud_A471 Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand Le 4e-09
2ij3_A470 Structure Of The A264h Mutant Of Cytochrome P450 Bm 4e-09
3ekd_A470 Crystal Structure Of The A264m Heme Domain Of Cytoc 4e-09
3qi8_B472 Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1) 4e-09
3ekb_A470 Crystal Structure Of The A264c Mutant Heme Domain O 4e-09
1p0x_A455 F393y Mutant Heme Domain Of Flavocytochrome P450 Bm 5e-09
1fah_A471 Structure Of Cytochrome P450 Length = 471 7e-09
3dgi_A461 Crystal Structure Of F87aT268A MUTANT OF CYP BM3 Le 7e-09
1yqo_A455 T268a Mutant Heme Domain Of Flavocytochrome P450 Bm 7e-09
1yqp_A455 T268n Mutant Cytochrome Domain Of Flavocytochrome P 8e-09
1p0w_A455 F393w Mutant Heme Domain Of Flavocytochrome P450 Bm 1e-08
1jme_A455 Crystal Structure Of Phe393his Cytochrome P450 Bm3 2e-08
1p0v_A455 F393a Mutant Heme Domain Of Flavocytochrome P450 Bm 2e-08
4dtw_B469 Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Seroto 2e-08
3eqm_A503 Crystal Structure Of Human Placental Aromatase Cyto 2e-08
4dub_A472 Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopami 2e-08
4dua_A471 Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand Leng 2e-08
3ibd_A476 Crystal Structure Of A Cytochrome P450 2b6 Genetic 4e-08
4du2_B470 Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamin 4e-08
3r9c_A418 Crystal Structure Of Mycobacterium Smegmatis Cyp164 5e-08
4i8v_A491 Human Cytochrome P450 1a1 In Complex With Alpha-nap 2e-07
3ejb_B404 Crystal Structure Of P450bioi In Complex With Tetra 3e-07
3ld6_A461 Crystal Structure Of Human Lanosterol 14alpha-Demet 5e-07
3mgx_A415 Crystal Structure Of P450 Oxyd That Is Involved In 2e-06
1odo_A408 1.85 A Structure Of Cyp154a1 From Streptomyces Coel 3e-06
3p3o_A416 Crystal Structure Of The Cytochrome P450 Monooxygen 4e-06
3p3l_A406 Crystal Structure Of The Cytochrome P450 Monooxygen 4e-06
2hi4_A495 Crystal Structure Of Human Microsomal P450 1a2 In C 5e-06
1ue8_A367 Crystal Structure Of Thermophilic Cytochrome P450 F 8e-06
4aw3_A417 Structure Of The Mixed-Function P450 Mycg F286v Mut 1e-05
3zsn_A417 Structure Of The Mixed-Function P450 Mycg F286a Mut 2e-05
3ruk_A494 Human Cytochrome P450 Cyp17a1 In Complex With Abira 2e-05
1q5d_A419 Epothilone B-Bound Cytochrome P450epok Length = 419 4e-05
1cpt_A428 Crystal Structure And Refinement Of Cytochrome P450 5e-05
2rfb_A343 Crystal Structure Of A Cytochrome P450 From The The 5e-05
2y46_A417 Structure Of The Mixed-Function P450 Mycg In Comple 5e-05
1pkf_A419 Crystal Structure Of Epothilone D-Bound Cytochrome 6e-05
2z3t_A425 Crystal Structure Of Substrate Free Cytochrome P450 9e-05
1f4t_A368 Thermophilic P450: Cyp119 From Sulfolobus Solfactar 1e-04
3l4d_A453 Crystal Structure Of Sterol 14-Alpha Demethylase (C 1e-04
1io8_A368 Thermophilic Cytochrome P450 (Cyp119) From Sulfolob 1e-04
2yoo_A407 Cholest-4-en-3-one Bound Structure Of Cyp142 From M 2e-04
1gwi_A411 The 1.92 A Structure Of Streptomyces Coelicolor A3( 3e-04
2q9f_A456 Crystal Structure Of Human Cytochrome P450 46a1 In 4e-04
4dvq_A483 Structure Of Human Aldosterone Synthase, Cyp11b2, I 5e-04
4apy_A433 Ethylene Glycol-bound Form Of P450 Cyp125a3 From My 9e-04
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1 Length = 444 Back     alignment and structure 
Iteration: 1

 Score =  156 bits (395), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 114/425 (26%), Positives = 191/425 (44%), Gaps = 32/425 (7%)
Query: 39  VPKGTFGLPLLGETLSFLKPHSSNSLGTFLQDHCSRYGKVFKSHLFFTPTVVSCDAELNY 98
           +P G FGLP LGETL+FL        G F +    ++G +FK+ LF    +    A  N 
Sbjct: 13  IPPGDFGLPWLGETLNFLND------GDFGKKRQQQFGPIFKTRLFGKNVIFISGALANR 66
Query: 99  FILQNEGKLFQCSYPKTIPGILGNLSMLVAVGDTHRRLRNAALSLVTITKSKPEFLNDIE 158
           F+   E + FQ ++P +   +LG  ++   +G+ HR  R   L    + ++   +L  ++
Sbjct: 67  FLFTKEQETFQATWPLSTRILLGPNALATQMGEIHRS-RRKILYQAFLPRTLDSYLPKMD 125
Query: 159 NFAIQILDSWKDKPQVIFCEEARKFTFNVIVKQVLGLTPEEPETTKILEDFLTFMKGLIS 218
                 L+ W    +VI+  + R+ TF+V     +G   +  +  ++   F T+++GL S
Sbjct: 126 GIVQGYLEQWGKANEVIWYPQLRRMTFDVAATLFMG--EKVSQNPQLFPWFETYIQGLFS 183
Query: 219 LPLYIPGTPYARAVKARRRISSTVKAIIXXXXXXXXXXXXXXXXXXXXXXFLEILLCV-- 276
           LP+ +P T + ++ +AR  + + ++ II                       L ILL    
Sbjct: 184 LPIPLPNTLFGKSQRARALLLAELEKIIKARQQQPPSEEDA----------LGILLAARD 233
Query: 277 ---DTLSEDEKVSFVLDSLLGGYETTSLLMALVVHFLGQSPTALEQLKLEHQTIRSMKQN 333
                LS  E    +L  L  G+ET +  ++     LGQ     E+++ E   +    Q 
Sbjct: 234 DNNQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKL----QL 289
Query: 334 NEHLNWEDYKKMDFTQNVINEALRYGNVVKFVHRKALKDVKYRDYLIPSGWKVLPVFTAV 393
           ++ L  E  KKM +   V+ E LR    V    R+ ++D +++ +  P GW V    +  
Sbjct: 290 SQELTAETLKKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQFQGFHFPKGWLVSYQISQT 349
Query: 394 HLDPSLHANAFQFHPWRWENQDQTCKK----FTPFGGGSRCCPGSELAKVEVAFFLHHLV 449
           H DP L+ +  +F P R+               PFGGG R C G E A++E+  F   L+
Sbjct: 350 HADPDLYPDPEKFDPERFTPDGSATHNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLI 409
Query: 450 QNFRW 454
           Q F W
Sbjct: 410 QQFDW 414
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With Coumarin Bound Length = 476 Back     alignment and structure
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q Length = 476 Back     alignment and structure
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q Length = 476 Back     alignment and structure
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V Length = 476 Back     alignment and structure
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX With Phenacetin Length = 476 Back     alignment and structure
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole Bound In Two Alternate Conformations Length = 476 Back     alignment and structure
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome P450 2c8 Length = 476 Back     alignment and structure
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome P4503a4-Bromoergocryptine Complex Length = 487 Back     alignment and structure
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4 Length = 486 Back     alignment and structure
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4 Length = 485 Back     alignment and structure
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With 4-(4-Chlorophenyl) Imidazole Length = 476 Back     alignment and structure
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4- Cholorophenyl)imidazole Length = 478 Back     alignment and structure
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound 4-(4- Chlorophenyl)imidazole Length = 476 Back     alignment and structure
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 Length = 476 Back     alignment and structure
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3 Length = 479 Back     alignment and structure
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2 Length = 481 Back     alignment and structure
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With Anti- Platelet Drug Clopidogrel Length = 479 Back     alignment and structure
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19 Length = 477 Back     alignment and structure
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From Streptomyces Coelicolor Length = 467 Back     alignment and structure
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound Length = 477 Back     alignment and structure
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5 Length = 473 Back     alignment and structure
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9 Length = 475 Back     alignment and structure
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex With 22- Hydroxy-Cholesterol Length = 486 Back     alignment and structure
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With Cholesterol Length = 487 Back     alignment and structure
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22- Dihydroxycholesterol Length = 471 Back     alignment and structure
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4- Methylpyrazole Length = 476 Back     alignment and structure
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450 Bm3 Length = 482 Back     alignment and structure
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In Complex With Chaps Length = 482 Back     alignment and structure
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase (P450c21) Length = 496 Back     alignment and structure
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex Length = 479 Back     alignment and structure
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of P450bm-3 With N-Palmitoylglycine Length = 473 Back     alignment and structure
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane Monoxygenase 139-3 Length = 455 Back     alignment and structure
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain Mut Length = 470 Back     alignment and structure
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6 Length = 479 Back     alignment and structure
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain Mut Length = 470 Back     alignment and structure
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3 Length = 487 Back     alignment and structure
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain, A Ruthenium Modified P450 Bm3 Mutant Length = 470 Back     alignment and structure
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome P450- Bm3 Length = 470 Back     alignment and structure
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A Prototype For Microsomal P450's Length = 471 Back     alignment and structure
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine Inhibitor Bound To The Heme Domain Of Cytochrome P450-Bm3 Length = 470 Back     alignment and structure
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain Mut Length = 470 Back     alignment and structure
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of P450bm- 3 With N-Palmitoylglycine Length = 473 Back     alignment and structure
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3 Length = 471 Back     alignment and structure
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid Length = 458 Back     alignment and structure
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso Length = 455 Back     alignment and structure
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The Cytochrome P450(Bm-3) Length = 458 Back     alignment and structure
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain Of Cytochrome P450bm-3 Length = 455 Back     alignment and structure
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450 Bm3 Length = 482 Back     alignment and structure
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of P450bm-3 Length = 473 Back     alignment and structure
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3 Length = 470 Back     alignment and structure
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome P450 Bm3 Length = 470 Back     alignment and structure
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational Rearrangement Seen Upon Substrate-Binding In Wild-Type Enzyme Length = 471 Back     alignment and structure
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin Length = 471 Back     alignment and structure
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand Length = 472 Back     alignment and structure
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand Length = 471 Back     alignment and structure
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3 Length = 470 Back     alignment and structure
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome P450 Bm3 Length = 470 Back     alignment and structure
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1) Length = 472 Back     alignment and structure
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of Cytochrome P450 Bm3 Length = 470 Back     alignment and structure
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3 Length = 455 Back     alignment and structure
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450 Length = 471 Back     alignment and structure
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3 Length = 461 Back     alignment and structure
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3 Length = 455 Back     alignment and structure
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3 Length = 455 Back     alignment and structure
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3 Length = 455 Back     alignment and structure
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3 Length = 455 Back     alignment and structure
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3 Length = 455 Back     alignment and structure
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin Length = 469 Back     alignment and structure
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome P450 In Complex With Androstenedione Length = 503 Back     alignment and structure
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine Length = 472 Back     alignment and structure
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand Length = 471 Back     alignment and structure
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant In Complex With The Inhibitor 4-(4-Chlorophenyl)imidazole Length = 476 Back     alignment and structure
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine Length = 470 Back     alignment and structure
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With Econazole Bound Length = 418 Back     alignment and structure
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With Alpha-naphthoflavone Length = 491 Back     alignment and structure
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With Tetradecanoic Acid Ligated Acyl Carrier Protein Length = 404 Back     alignment and structure
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase (C Complex With Ketoconazole Length = 461 Back     alignment and structure
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The Biosynthesis Of Vancomycin-Type Antibiotics Length = 415 Back     alignment and structure
>pdb|1ODO|A Chain A, 1.85 A Structure Of Cyp154a1 From Streptomyces Coelicolor A3(2) Length = 408 Back     alignment and structure
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase Aurh (Ntermii) From Streptomyces Thioluteus Length = 416 Back     alignment and structure
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase Aurh (Wildtype) From Streptomyces Thioluteus Length = 406 Back     alignment and structure
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex With Alpha-Naphthoflavone Length = 495 Back     alignment and structure
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From Sulfolobus Tokodaii Length = 367 Back     alignment and structure
>pdb|4AW3|A Chain A, Structure Of The Mixed-Function P450 Mycg F286v Mutant In Complex With Mycinamicin V In P1 Space Group Length = 417 Back     alignment and structure
>pdb|3ZSN|A Chain A, Structure Of The Mixed-Function P450 Mycg F286a Mutant In Complex With Mycinamicin Iv Length = 417 Back     alignment and structure
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone Length = 494 Back     alignment and structure
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok Length = 419 Back     alignment and structure
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp At 2.3 Angstroms Resolution Length = 428 Back     alignment and structure
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The Thermoacidophilic Archaeon Picrophilus Torridus Length = 343 Back     alignment and structure
>pdb|2Y46|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With Mycinamicin Iv In C 2 2 21 Space Group Length = 417 Back     alignment and structure
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome P450epok Length = 419 Back     alignment and structure
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap (cyp245a1) Length = 425 Back     alignment and structure
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus With 4- Phenylimidazole Bound Length = 368 Back     alignment and structure
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51) From Leishmania Infantum In Complex With Fluconazole Length = 453 Back     alignment and structure
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus Solfataricus: High Resolution Structural Origin Of Its Thermostability And Functional Properties Length = 368 Back     alignment and structure
>pdb|2YOO|A Chain A, Cholest-4-en-3-one Bound Structure Of Cyp142 From Mycobacterium Smegmatis Length = 407 Back     alignment and structure
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2) Cyp154c1: A New Monooxygenase That Functionalizes Macrolide Ring Systems Length = 411 Back     alignment and structure
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex With Cholesterol-3-Sulphate Length = 456 Back     alignment and structure
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In Complex With Deoxycorticosterone Length = 483 Back     alignment and structure
>pdb|4APY|A Chain A, Ethylene Glycol-bound Form Of P450 Cyp125a3 From Mycobacterium Smegmatis Length = 433 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query490
2ve3_A444 Putative cytochrome P450 120; oxidoreductase, mono 1e-153
1izo_A417 P450bsbeta, cytochrome P450 152A1; heme protein, p 6e-92
3awm_A415 Fatty acid alpha-hydroxylase; cytochrome P450, per 2e-83
3i3k_A461 Lanosterol 14-alpha demethylase; cytochrome P450, 2e-75
3dax_A491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 3e-75
2cib_A455 Cytochrome P450 51; heme, heme lipid synthesis, me 7e-75
3dbg_A467 Putative cytochrome P450; cytochrome P450 oxidored 2e-64
3gw9_A450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 5e-64
3b6h_A498 Prostacyclin synthase; enzyme-inhibitor complex, C 2e-62
3k9v_A482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 2e-59
3n9y_A487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 2e-50
3b98_A475 Prostaglandin I2 synthase; prostacyclin synthase, 2e-47
3s79_A503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 3e-46
3mdm_A456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 2e-38
3dan_A473 Cytochrome P450 74A2; AOS heme cytochrome P450 str 1e-37
3dsk_A495 Cytochrome P450 74A, chloroplast; P450 fold, fatty 4e-34
2ij2_A470 Cytochrome P450 BM3; monoxygenase, heme binding pr 8e-34
1n97_A389 CYP175A1; electron transport; HET: SRT HEM; 1.80A 3e-32
3qz1_A496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 9e-28
2hi4_A495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 5e-27
1r9o_A477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 2e-26
3czh_A481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 7e-26
3tbg_A479 Cytochrome P450 2D6; monooxygenase, thioridazine, 1e-25
2fdv_A476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 3e-25
3pm0_A507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 3e-25
1po5_A476 Cytochrome P450 2B4; oxidoreductase, membrane prot 5e-25
3swz_A494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 6e-25
3nxu_A485 Cytochrome P450 3A4; alpha beta protein, cytochrom 1e-24
3e6i_A476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 6e-24
3lxh_A421 Cytochrome P450; heme, iron, metal-binding, monoox 3e-19
4dxy_A417 Cytochrome P450, CYP101D2; cytochrome P450 mutant, 4e-19
3nc3_A441 Cytochrome P450 CYPX; cytochrome P450 oxidase, HAE 8e-19
3mgx_A415 Putative P450 monooxygenase; cytochrome P450 oxida 9e-19
2zwu_A415 Camphor 5-monooxygenase; P450CAM, camphor-hydroxyl 5e-18
2xkr_A398 CYP142, putative cytochrome P450 142; oxidoreducta 3e-16
3oft_A396 Cytochrome P450, CYP101C1; oxidoreductase; HET: HE 3e-16
3ejb_B404 Biotin biosynthesis cytochrome P450-like enzyme; p 5e-16
3r9b_A418 Cytochrome P450 164A2; monooxygenase, oxidoreducta 1e-15
2wiy_A394 XPLA-heme, cytochrome P450-like protein XPLA; CYT- 5e-15
3tkt_A450 Cytochrome P450; aromatic hydrocarbon binding of P 5e-15
2wm5_A435 CYP124, putative cytochrome P450 124; metal-bindin 9e-15
3rwl_A426 Cytochrome P450 alkane hydroxylase 1 CYP153A7; P45 1e-14
2jjn_A411 Cytochrome P450 113A1; oxidoreductase, iron, heme, 3e-14
4fb2_A398 P450CIN; heme, monooxygenase, cindoxin, oxidoreduc 4e-14
2z3t_A425 Cytochrome P450; monoxygenase, oxydoreductase, hem 5e-14
1cpt_A428 Cytochrome P450-TERP; oxidoreductase(oxygenase); H 1e-13
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-13
2uuq_A414 CYP130, cytochrome P450 130; iron, heme, monooxyge 2e-13
3abb_A408 CYP105D6, cytochrome P450 hydroxylase; oxidoreduct 2e-13
3ivy_A433 Cytochrome P450 CYP125; cholesterol, monooxygenase 4e-13
1lfk_A398 OXYB, P450 monooxygenase; oxidative phenol couplin 5e-13
4dnj_A412 Putative cytochrome P450; oxidoreductase; HET: HEM 6e-13
1q5d_A419 P450 epoxidase; cytochrome P450, epothilone, oxydo 6e-13
3buj_A397 CALO2; heme, iron, metal-binding, monooxygenase, o 7e-13
1odo_A408 Putative cytochrome P450 154A1; P450 monooxygenase 1e-12
3a4g_A411 Vitamin D hydroxylase; cytochrome P450, hemoprotei 1e-12
2cd8_A436 Cytochrome P450 monooxygenase; oxidoreductase, PIK 1e-12
1z8o_A404 6-deoxyerythronolide B hydroxylase; heme, CYP, ery 1e-12
2xbk_A404 PIMD protein; epoxidation, oxidoreductase; HET: HE 1e-12
3tyw_A417 Putative cytochrome P450; P450 monooxygenase, oxid 1e-12
1ued_A406 P450 OXYC, P450 monooxygenase; cytochrome P450 van 2e-12
1s1f_A406 Putative cytochrome P450; cytochrome P450 oxidored 2e-12
2z36_A413 MOXA, cytochrome P450 type compactin 3'',4''- hydr 3e-12
3aba_A403 Cytochrome P450; oxidoreductase, heme, monooxygena 3e-12
2zbx_A412 Cytochrome P450-SU1; beta prism, heme, iron, metal 7e-12
2y5n_A417 MYCG, P-450-like protein; oxidoreductase, mycinami 8e-12
2rfb_A343 Cytochrome P450; heme, iron, metal-binding, monoox 1e-11
1jfb_A404 Nitric-oxide reductase cytochrome P450 55A1; cytoc 1e-11
2dkk_A411 Cytochrome P450; CYP158A1, INHI oxidoreductase; HE 1e-11
3b4x_A367 367AA long hypothetical cytochrome P450; HEM prote 1e-11
1n40_A396 P450 MT2, cytochrome P450 121; heme binding, oxyge 2e-11
1gwi_A411 CYP154C1, cytochrome P450 154C1; oxidoreductase, m 7e-11
3p3o_A416 Cytochrome P450; monooxygenase, oxidoreductase; HE 1e-10
2yjn_B381 Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; 2e-10
3oo3_A384 OXY protein; cytochrome P450, monooxygenase, PCD-t 4e-10
1io7_A368 Cytochrome P450 CYP119; thermophilic, cytochromo P 1e-09
1qzv_F154 Plant photosystem I: subunit PSAF; photosynthesis, 8e-05
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Length = 444 Back     alignment and structure
 Score =  443 bits (1141), Expect = e-153
 Identities = 117/452 (25%), Positives = 200/452 (44%), Gaps = 34/452 (7%)

Query: 39  VPKGTFGLPLLGETLSFLKPHSSNSLGTFLQDHCSRYGKVFKSHLFFTPTVVSCDAELNY 98
           +P G FGLP LGETL+FL        G F +    ++G +FK+ LF    +    A  N 
Sbjct: 13  IPPGDFGLPWLGETLNFLND------GDFGKKRQQQFGPIFKTRLFGKNVIFISGALANR 66

Query: 99  FILQNEGKLFQCSYPKTIPGILGNLSMLVAVGDTHRRLRNAALSLVTITKSKPEFLNDIE 158
           F+   E + FQ ++P +   +LG  ++   +G+ HR  R               +L  ++
Sbjct: 67  FLFTKEQETFQATWPLSTRILLGPNALATQMGEIHRSRRKILYQAFLPRTLD-SYLPKMD 125

Query: 159 NFAIQILDSWKDKPQVIFCEEARKFTFNVIVKQVLGLTPEEPETTKILEDFLTFMKGLIS 218
                 L+ W    +VI+  + R+ TF+V     +G    +    ++   F T+++GL S
Sbjct: 126 GIVQGYLEQWGKANEVIWYPQLRRMTFDVAATLFMGEKVSQ--NPQLFPWFETYIQGLFS 183

Query: 219 LPLYIPGTPYARAVKARRRISSTVKAIIEKRRRRSSNNNSADNSEKKNSDFLEILLCV-- 276
           LP+ +P T + ++ +AR  + + ++ II+ R+++  +            D L ILL    
Sbjct: 184 LPIPLPNTLFGKSQRARALLLAELEKIIKARQQQPPSEE----------DALGILLAARD 233

Query: 277 ---DTLSEDEKVSFVLDSLLGGYETTSLLMALVVHFLGQSPTALEQLKLEHQTIRSMKQN 333
                LS  E    +L  L  G+ET +  ++     LGQ     E+++ E   ++     
Sbjct: 234 DNNQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQL---- 289

Query: 334 NEHLNWEDYKKMDFTQNVINEALRYGNVVKFVHRKALKDVKYRDYLIPSGWKVLPVFTAV 393
           ++ L  E  KKM +   V+ E LR    V    R+ ++D +++ +  P GW V    +  
Sbjct: 290 SQELTAETLKKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQFQGFHFPKGWLVSYQISQT 349

Query: 394 HLDPSLHANAFQFHPWRWENQDQTCKK----FTPFGGGSRCCPGSELAKVEVAFFLHHLV 449
           H DP L+ +  +F P R+               PFGGG R C G E A++E+  F   L+
Sbjct: 350 HADPDLYPDPEKFDPERFTPDGSATHNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLI 409

Query: 450 QNFRWR--NQDEDQPIAYPYVEFKRGLVLNVE 479
           Q F W        + +  P    K  L + + 
Sbjct: 410 QQFDWTLLPGQNLELVVTPSPRPKDNLRVKLH 441
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Length = 417 Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Length = 415 Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Length = 491 Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Length = 455 Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Length = 467 Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Length = 450 Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Length = 498 Back     alignment and structure
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Length = 482 Back     alignment and structure
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Length = 487 Back     alignment and structure
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Length = 475 Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* Length = 503 Back     alignment and structure
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* Length = 456 Back     alignment and structure
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A* Length = 473 Back     alignment and structure
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A* Length = 495 Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Length = 470 Back     alignment and structure
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A* Length = 389 Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Length = 496 Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Length = 495 Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Length = 477 Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Length = 481 Back     alignment and structure
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Length = 479 Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Length = 476 Back     alignment and structure
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Length = 507 Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Length = 476 Back     alignment and structure
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Length = 494 Back     alignment and structure
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A* Length = 485 Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Length = 476 Back     alignment and structure
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} PDB: 3lxi_A* Length = 421 Back     alignment and structure
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A* Length = 417 Back     alignment and structure
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A* Length = 441 Back     alignment and structure
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina} Length = 415 Back     alignment and structure
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ... Length = 415 Back     alignment and structure
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis} Length = 398 Back     alignment and structure
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A* Length = 396 Back     alignment and structure
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} PDB: 3ejd_B* 3eje_B* Length = 404 Back     alignment and structure
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A* Length = 418 Back     alignment and structure
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A* Length = 394 Back     alignment and structure
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} Length = 450 Back     alignment and structure
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A* Length = 435 Back     alignment and structure
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida} Length = 426 Back     alignment and structure
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A* Length = 411 Back     alignment and structure
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 1t2b_A* 3bdz_A* 3be0_A* Length = 398 Back     alignment and structure
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A* Length = 425 Back     alignment and structure
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1 Length = 428 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A* Length = 414 Back     alignment and structure
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis} Length = 408 Back     alignment and structure
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A* Length = 433 Back     alignment and structure
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A* Length = 398 Back     alignment and structure
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A* Length = 412 Back     alignment and structure
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A* Length = 419 Back     alignment and structure
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora} Length = 397 Back     alignment and structure
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1 Length = 408 Back     alignment and structure
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A* Length = 411 Back     alignment and structure
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A* Length = 436 Back     alignment and structure
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A* Length = 404 Back     alignment and structure
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A* Length = 404 Back     alignment and structure
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} Length = 417 Back     alignment and structure
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1 Length = 406 Back     alignment and structure
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A* Length = 406 Back     alignment and structure
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena} Length = 413 Back     alignment and structure
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A* Length = 403 Back     alignment and structure
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A* Length = 412 Back     alignment and structure
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A* Length = 417 Back     alignment and structure
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A* Length = 343 Back     alignment and structure
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A* Length = 404 Back     alignment and structure
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A* Length = 411 Back     alignment and structure
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A* Length = 367 Back     alignment and structure
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A* Length = 396 Back     alignment and structure
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1 Length = 411 Back     alignment and structure
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A* Length = 416 Back     alignment and structure
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Length = 381 Back     alignment and structure
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} PDB: 3o1a_A* Length = 384 Back     alignment and structure
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A* Length = 368 Back     alignment and structure
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query490
3ld6_A461 Lanosterol 14-alpha demethylase; cytochrome P450, 100.0
2ve3_A444 Putative cytochrome P450 120; oxidoreductase, mono 100.0
3k9v_A482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 100.0
3tbg_A479 Cytochrome P450 2D6; monooxygenase, thioridazine, 100.0
3e6i_A476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 100.0
3nxu_A485 Cytochrome P450 3A4; alpha beta protein, cytochrom 100.0
3s79_A503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 100.0
3swz_A494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 100.0
2fdv_A476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 100.0
1r9o_A477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 100.0
3qz1_A496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 100.0
1po5_A476 Cytochrome P450 2B4; oxidoreductase, membrane prot 100.0
3n9y_A487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 100.0
3czh_A481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 100.0
3pm0_A507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 100.0
2cib_A455 Cytochrome P450 51; heme, heme lipid synthesis, me 100.0
2hi4_A495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 100.0
3i3k_A461 Lanosterol 14-alpha demethylase; cytochrome P450, 100.0
3dbg_A467 Putative cytochrome P450; cytochrome P450 oxidored 100.0
3gw9_A450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 100.0
2ij2_A470 Cytochrome P450 BM3; monoxygenase, heme binding pr 100.0
3mdm_A456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 100.0
3v8d_A491 Cholesterol 7-alpha-monooxygenase; cytochrome, oxi 100.0
3dax_A491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 100.0
1izo_A417 P450bsbeta, cytochrome P450 152A1; heme protein, p 100.0
3b98_A475 Prostaglandin I2 synthase; prostacyclin synthase, 100.0
3b6h_A498 Prostacyclin synthase; enzyme-inhibitor complex, C 100.0
3awm_A415 Fatty acid alpha-hydroxylase; cytochrome P450, per 100.0
2cd8_A436 Cytochrome P450 monooxygenase; oxidoreductase, PIK 100.0
1n97_A389 CYP175A1; electron transport; HET: SRT HEM; 1.80A 100.0
2zwu_A415 Camphor 5-monooxygenase; P450CAM, camphor-hydroxyl 100.0
1cpt_A428 Cytochrome P450-TERP; oxidoreductase(oxygenase); H 100.0
3ejb_B404 Biotin biosynthesis cytochrome P450-like enzyme; p 100.0
1ued_A406 P450 OXYC, P450 monooxygenase; cytochrome P450 van 100.0
1jfb_A404 Nitric-oxide reductase cytochrome P450 55A1; cytoc 100.0
2jjn_A411 Cytochrome P450 113A1; oxidoreductase, iron, heme, 100.0
2xkr_A398 CYP142, putative cytochrome P450 142; oxidoreducta 100.0
4fb2_A398 P450CIN; heme, monooxygenase, cindoxin, oxidoreduc 100.0
1q5d_A419 P450 epoxidase; cytochrome P450, epothilone, oxydo 100.0
3nc3_A441 Cytochrome P450 CYPX; cytochrome P450 oxidase, HAE 100.0
3lxh_A421 Cytochrome P450; heme, iron, metal-binding, monoox 100.0
3buj_A397 CALO2; heme, iron, metal-binding, monooxygenase, o 100.0
3dsk_A495 Cytochrome P450 74A, chloroplast; P450 fold, fatty 100.0
2z3t_A425 Cytochrome P450; monoxygenase, oxydoreductase, hem 100.0
3a4g_A411 Vitamin D hydroxylase; cytochrome P450, hemoprotei 100.0
3mgx_A415 Putative P450 monooxygenase; cytochrome P450 oxida 100.0
3ivy_A433 Cytochrome P450 CYP125; cholesterol, monooxygenase 100.0
2zbx_A412 Cytochrome P450-SU1; beta prism, heme, iron, metal 100.0
2uuq_A414 CYP130, cytochrome P450 130; iron, heme, monooxyge 100.0
3aba_A403 Cytochrome P450; oxidoreductase, heme, monooxygena 100.0
3r9b_A418 Cytochrome P450 164A2; monooxygenase, oxidoreducta 100.0
1s1f_A406 Putative cytochrome P450; cytochrome P450 oxidored 100.0
3dan_A473 Cytochrome P450 74A2; AOS heme cytochrome P450 str 100.0
2dkk_A411 Cytochrome P450; CYP158A1, INHI oxidoreductase; HE 100.0
1z8o_A404 6-deoxyerythronolide B hydroxylase; heme, CYP, ery 100.0
2y5n_A417 MYCG, P-450-like protein; oxidoreductase, mycinami 100.0
3oft_A396 Cytochrome P450, CYP101C1; oxidoreductase; HET: HE 100.0
1gwi_A411 CYP154C1, cytochrome P450 154C1; oxidoreductase, m 100.0
2wm5_A435 CYP124, putative cytochrome P450 124; metal-bindin 100.0
1odo_A408 Putative cytochrome P450 154A1; P450 monooxygenase 100.0
3rwl_A426 Cytochrome P450 alkane hydroxylase 1 CYP153A7; P45 100.0
3abb_A408 CYP105D6, cytochrome P450 hydroxylase; oxidoreduct 100.0
3tkt_A450 Cytochrome P450; aromatic hydrocarbon binding of P 100.0
2xbk_A404 PIMD protein; epoxidation, oxidoreductase; HET: HE 100.0
2z36_A413 MOXA, cytochrome P450 type compactin 3'',4''- hydr 100.0
3tyw_A417 Putative cytochrome P450; P450 monooxygenase, oxid 100.0
1n40_A396 P450 MT2, cytochrome P450 121; heme binding, oxyge 100.0
3b4x_A367 367AA long hypothetical cytochrome P450; HEM prote 100.0
3oo3_A384 OXY protein; cytochrome P450, monooxygenase, PCD-t 100.0
2wiy_A394 XPLA-heme, cytochrome P450-like protein XPLA; CYT- 100.0
1lfk_A398 OXYB, P450 monooxygenase; oxidative phenol couplin 100.0
1io7_A368 Cytochrome P450 CYP119; thermophilic, cytochromo P 100.0
3p3o_A416 Cytochrome P450; monooxygenase, oxidoreductase; HE 100.0
2rfb_A343 Cytochrome P450; heme, iron, metal-binding, monoox 100.0
4dnj_A412 Putative cytochrome P450; oxidoreductase; HET: HEM 100.0
4dxy_A417 Cytochrome P450, CYP101D2; cytochrome P450 mutant, 100.0
2yjn_B381 Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; 100.0
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A* Back     alignment and structure
Probab=100.00  E-value=1.5e-76  Score=581.57  Aligned_cols=428  Identities=20%  Similarity=0.295  Sum_probs=365.0

Q ss_pred             CCCCCCCC-CccccccccccccCCCCChhhHHHHHHHhcCCceEEcccCccEEEEcChHHHHHHHhcCCCCcccCC--CC
Q 011242           38 HVPKGTFG-LPLLGETLSFLKPHSSNSLGTFLQDHCSRYGKVFKSHLFFTPTVVSCDAELNYFILQNEGKLFQCSY--PK  114 (490)
Q Consensus        38 ~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~l~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~--~~  114 (490)
                      +.||+|++ +|++||++.+.+     +++.++.++++||||||+++++|.+.++|+||+.+++++.+++..+..+.  ..
T Consensus        11 ~~PP~~~~~lP~iG~~~~~~~-----~~~~~~~~~~~kYG~i~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~~~   85 (461)
T 3ld6_A           11 KSPPYIFSPIPFLGHAIAFGK-----SPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSR   85 (461)
T ss_dssp             CCCCBCCCSSTTTBTHHHHHH-----CHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHH
T ss_pred             CCCCCCCCCcCeeeeHHHhhh-----CHHHHHHHHHHHhCCEEEEEECCccEEEEeCHHHHHHHHhCCccccCCCcchhh
Confidence            35667765 999999998854     89999999999999999999999999999999999999998877665432  23


Q ss_pred             chhhhhcccccccccChhhHHHHHHHhhhccccccchhhHHHHHHHHHHHHHhhcCCCcccHHHHHHHHHHHHHHHHHcC
Q 011242          115 TIPGILGNLSMLVAVGDTHRRLRNAALSLVTITKSKPEFLNDIENFAIQILDSWKDKPQVIFCEEARKFTFNVIVKQVLG  194 (490)
Q Consensus       115 ~~~~~~g~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG  194 (490)
                      .....+|...++..+|+.|+++|+++.+.|+...+. .+.+.+.+.++++++.+.+...+|+.+.+..+++++++.++||
T Consensus        86 ~~~~~~g~~~~~~~~~~~~~~~R~~~~~~f~~~~l~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~fG  164 (461)
T 3ld6_A           86 LTTPVFGKGVAYDVPNPVFLEQKKMLKSGLNIAHFK-QHVSIIEKETKEYFESWGESGEKNVFEALSELIILTASHCLHG  164 (461)
T ss_dssp             HHHHHHCTTSGGGSCHHHHHHHHHHHHHHSSHHHHH-HHHHHHHHHHHHHGGGGCSEEEEEHHHHHHHHHHHHHHHHHTC
T ss_pred             hhhccCCCccccCCCcHHHHHHHHhccccccHHHHh-hhhHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHHHcC
Confidence            344566764455678999999999999999999888 7899999999999999988889999999999999999999999


Q ss_pred             CCCCchhhhHHHHHHHHHHhhh----hhccccCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCccCCcchHH
Q 011242          195 LTPEEPETTKILEDFLTFMKGL----ISLPLYIPGTPYARAVKARRRISSTVKAIIEKRRRRSSNNNSADNSEKKNSDFL  270 (490)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~dll  270 (490)
                      .+.++.....+.+.+..+...+    ..++.++|...+.+..++.+.+.+++.+.+++++.....          ..|++
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~----------~~d~l  234 (461)
T 3ld6_A          165 KEIRSQLNEKVAQLYADLDGGFSHAAWLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRRQSQEK----------IDDIL  234 (461)
T ss_dssp             HHHHHTCCHHHHHHHHHHHTTSSHHHHHSCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC----------CCSHH
T ss_pred             cchhhhhhhhhhhhhhhhhhhhhhHHHhhhhhccCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCC----------Ccchh
Confidence            7654423334444444333332    235667777777788888889999999999888765432          56899


Q ss_pred             HHhhc-----cCCCChHHHHHHHHHHhhcchhchHHHHHHHHHHHhcCchHHHHHHHHHHHHhhhhcCCCCCCHHhhcCC
Q 011242          271 EILLC-----VDTLSEDEKVSFVLDSLLGGYETTSLLMALVVHFLGQSPTALEQLKLEHQTIRSMKQNNEHLNWEDYKKM  345 (490)
Q Consensus       271 ~~ll~-----~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l  345 (490)
                      +.+++     +..++++++++++..+++||+|||+++++|++++|+.||++|+++|+|++++.+  .....++.+++++|
T Consensus       235 ~~ll~~~~~~~~~ls~~ei~~~~~~~~~aG~dTt~~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~--~~~~~~~~~~l~~l  312 (461)
T 3ld6_A          235 QTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCG--ENLPPLTYDQLKDL  312 (461)
T ss_dssp             HHHHTCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHC--TTCCCCCHHHHHTC
T ss_pred             hhhHHhhhcccCCCCHHHHHHHHHhhhhcccccccccchhhhcccccChHHHHHHHHHHHHHhc--ccccchhHHHHHHH
Confidence            99983     235999999999999999999999999999999999999999999999999986  34567899999999


Q ss_pred             ccHHHHHHhHhccCCCccccceeeccccccCCeeeCCCCEEEecccccccCCCCCCCCCCccCCCCCCCCC---CCCCcc
Q 011242          346 DFTQNVINEALRYGNVVKFVHRKALKDVKYRDYLIPSGWKVLPVFTAVHLDPSLHANAFQFHPWRWENQDQ---TCKKFT  422 (490)
Q Consensus       346 ~~l~a~i~E~lRl~~~~~~~~R~~~~~~~~~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~PeRf~~~~~---~~~~~~  422 (490)
                      |||+|||+|+||++|+++...|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||++.++   +...|+
T Consensus       313 pyl~avi~E~lRl~p~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~  392 (461)
T 3ld6_A          313 NLLDRCIKETLRLRPPIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPASGEKFAYV  392 (461)
T ss_dssp             HHHHHHHHHHHHHSCSCCCEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCGGGGGSCCHHHHSSSSSC
T ss_pred             hhhhheeeeccccCCchhccccccccceeeCCcccCCCCeeeechHhhcCCccccCCccccCccccCCCCcccCCCCccc
Confidence            99999999999999999988899999999999999999999999999999999999999999999998653   367899


Q ss_pred             ccCCCCCCCCChHHHHHHHHHHHHHHHHhceeeecCCCCccc--cCcccccCCceEEEEecCc
Q 011242          423 PFGGGSRCCPGSELAKVEVAFFLHHLVQNFRWRNQDEDQPIA--YPYVEFKRGLVLNVECCSD  483 (490)
Q Consensus       423 ~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~--~~~~~~~~~~~v~~~~r~~  483 (490)
                      |||+|+|.|+|++||.+|++++++.|+++|+|+++++..+..  ...+..+.++.|++++|+.
T Consensus       393 pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~l~~~~~~~~~~~~~~~~p~~~~v~~~~Rss  455 (461)
T 3ld6_A          393 PFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTVNYTTMIHTPENPVIRYKRRST  455 (461)
T ss_dssp             TTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCCCCBCCSSSSCCBSSCEEEEEECC-
T ss_pred             cCCCcCcCChhHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcccccceEEcCCceEEEEEECCC
Confidence            999999999999999999999999999999999987544332  2236678889999999975
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Back     alignment and structure
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Back     alignment and structure
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Back     alignment and structure
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A* Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A* Back     alignment and structure
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Back     alignment and structure
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Back     alignment and structure
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Back     alignment and structure
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A* Back     alignment and structure
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A* Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Back     alignment and structure
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Back     alignment and structure
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A* Back     alignment and structure
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A* Back     alignment and structure
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ... Back     alignment and structure
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1 Back     alignment and structure
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B* Back     alignment and structure
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1 Back     alignment and structure
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A* Back     alignment and structure
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A* Back     alignment and structure
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis} Back     alignment and structure
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A* Back     alignment and structure
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A* Back     alignment and structure
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A* Back     alignment and structure
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A* Back     alignment and structure
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora} Back     alignment and structure
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A* Back     alignment and structure
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A* Back     alignment and structure
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A* Back     alignment and structure
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina} Back     alignment and structure
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A* Back     alignment and structure
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A* Back     alignment and structure
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A* Back     alignment and structure
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A* Back     alignment and structure
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A* Back     alignment and structure
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A* Back     alignment and structure
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A* Back     alignment and structure
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A* Back     alignment and structure
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A* Back     alignment and structure
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A* Back     alignment and structure
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A* Back     alignment and structure
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A* Back     alignment and structure
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida} Back     alignment and structure
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis} Back     alignment and structure
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} Back     alignment and structure
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A* Back     alignment and structure
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena} Back     alignment and structure
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A* Back     alignment and structure
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A* Back     alignment and structure
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A* Back     alignment and structure
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A* Back     alignment and structure
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A* Back     alignment and structure
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A* Back     alignment and structure
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A* Back     alignment and structure
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A* Back     alignment and structure
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A* Back     alignment and structure
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A* Back     alignment and structure
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A* Back     alignment and structure
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 490
d1tqna_472 a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Huma 1e-49
d1po5a_465 a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabb 3e-49
d3czha1463 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2 7e-46
d1izoa_411 a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Ba 6e-43
d1r9oa_467 a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Huma 3e-39
d2ciba1445 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-stero 6e-33
d2ij2a1453 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus 2e-31
d1cpta_428 a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas s 6e-20
d1odoa_401 a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyce 1e-19
d1n97a_385 a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [Tax 4e-18
d1lfka_394 a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatops 5e-16
d1ue8a_367 a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodai 2e-15
d1z8oa1402 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharo 7e-15
d1io7a_366 a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfata 8e-15
d1jfba_399 a.104.1.1 (A:) Cytochrome P450-NOR, nitric reducta 3e-14
d1ueda_403 a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatops 3e-14
d1gwia_403 a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyce 9e-14
d1q5da_401 a.104.1.1 (A:) Cytochrome P450epok {Sorangium cell 2e-13
d1s1fa_399 a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [ 2e-12
d1re9a_404 a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas pu 2e-10
d1n40a_395 a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2) {My 6e-10
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Length = 472 Back     information, alignment and structure

class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Mammalian cytochrome P450 3a4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  174 bits (441), Expect = 1e-49
 Identities = 94/470 (20%), Positives = 180/470 (38%), Gaps = 35/470 (7%)

Query: 28  HNLPLFLRLSHVPKGTFGLPLLGETLSFLKPHSSNSLGTFLQDHCSRYGKVFKSHLFFTP 87
           H+  LF +L  +P G   LP LG  LS+ K         F  +   +YGKV+  +    P
Sbjct: 1   HSHGLFKKL-GIP-GPTPLPFLGNILSYHKGFCM-----FDMECHKKYGKVWGFYDGQQP 53

Query: 88  TVVSCDAELNYFILQNEGKLFQCSYPKTIPGILGNLSMLVAVGDTHRRLRNAALSLVT-- 145
            +   D ++   +L  E      +     P      ++ +A  +  +RLR+      T  
Sbjct: 54  VLAITDPDMIKTVLVKECYSVFTNRRPFGPVGFMKSAISIAEDEEWKRLRSLLSPTFTSG 113

Query: 146 -ITKSKPEFLNDIENFAIQILDSWKDKPQVIFCEEARKFTFNVIVKQVLGLTPEEPE--- 201
            + +  P      +     +    +    V   +    ++ +VI     G+  +      
Sbjct: 114 KLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQ 173

Query: 202 ------TTKILEDFL--TFMKGLISLPLYIPGTPYARAVKARRRISSTVKAIIEKRRRRS 253
                 T K+L       F   +   P  IP           R +++ ++  +++ +   
Sbjct: 174 DPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESR 233

Query: 254 SNNNSADNSEKK----NSDFLEILLCVDTLSEDEKVSFVLDSLLGGYETTSLLMALVVHF 309
             +      +      +S   +       LS+ E V+  +  +  GYETTS +++ +++ 
Sbjct: 234 LEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYE 293

Query: 310 LGQSPTALEQLKLEHQTIRSMKQNNEHLNWEDYKKMDFTQNVINEALRYGNVVKFVHRKA 369
           L   P   +  +   + I ++  N     ++   +M++   V+NE LR   +   + R  
Sbjct: 294 LATHP---DVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVC 350

Query: 370 LKDVKYRDYLIPSGWKVLPVFTAVHLDPSLHANAFQFHPWRWENQDQTCKK---FTPFGG 426
            KDV+     IP G  V+    A+H DP       +F P R+  +++       +TPFG 
Sbjct: 351 KKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGS 410

Query: 427 GSRCCPGSELAKVEVAFFLHHLVQNFRWRNQDEDQPIAYPYVEFKRGLVL 476
           G R C G   A + +   L  ++QNF ++   E Q      ++   G +L
Sbjct: 411 GPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIP----LKLSLGGLL 456
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 465 Back     information, alignment and structure
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Length = 463 Back     information, alignment and structure
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Length = 411 Back     information, alignment and structure
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Length = 467 Back     information, alignment and structure
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 445 Back     information, alignment and structure
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Length = 453 Back     information, alignment and structure
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306]} Length = 428 Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Length = 401 Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Length = 385 Back     information, alignment and structure
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis orientalis [TaxId: 31958]} Length = 394 Back     information, alignment and structure
>d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 111955]} Length = 367 Back     information, alignment and structure
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora erythraea [TaxId: 1836]} Length = 402 Back     information, alignment and structure
>d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 366 Back     information, alignment and structure
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase {Fungus (Fusarium oxysporum) [TaxId: 5507]} Length = 399 Back     information, alignment and structure
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]} Length = 403 Back     information, alignment and structure
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Length = 403 Back     information, alignment and structure
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum [TaxId: 56]} Length = 401 Back     information, alignment and structure
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} Length = 399 Back     information, alignment and structure
>d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida [TaxId: 303]} Length = 404 Back     information, alignment and structure
>d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 395 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query490
d2ciba1445 Cytochrome p450 14 alpha-sterol demethylase (cyp51 100.0
d1tqna_472 Mammalian cytochrome P450 3a4 {Human (Homo sapiens 100.0
d2ij2a1453 Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 100.0
d1r9oa_467 Mammalian cytochrome p450 2c9 {Human (Homo sapiens 100.0
d3czha1463 Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapie 100.0
d1po5a_465 Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus 100.0
d1izoa_411 Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis 100.0
d1n97a_385 Cyp175a1 {Thermus thermophilus [TaxId: 274]} 100.0
d1gwia_403 Cyp154c1 monooxygenase {Streptomyces coelicolor [T 100.0
d1z8oa1402 Cytochrome P450-ERYF {Saccharopolyspora erythraea 100.0
d1ueda_403 p450 monoxygenase OxyC {Amycolatopsis orientalis [ 100.0
d1q5da_401 Cytochrome P450epok {Sorangium cellulosum [TaxId: 100.0
d1odoa_401 Cyp154a1 monooxygenase {Streptomyces coelicolor [T 100.0
d1jfba_399 Cytochrome P450-NOR, nitric reductase {Fungus (Fus 100.0
d1re9a_404 Cytochrome P450-CAM {Pseudomonas putida [TaxId: 30 100.0
d1cpta_428 Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306] 100.0
d1n40a_395 Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tub 100.0
d1s1fa_399 Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} 100.0
d1ue8a_367 Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 11195 100.0
d1io7a_366 Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2 100.0
d1lfka_394 p450 monoxygenase OxyB {Amycolatopsis orientalis [ 100.0
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Cytochrome p450 14 alpha-sterol demethylase (cyp51)
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=3.6e-75  Score=567.82  Aligned_cols=427  Identities=16%  Similarity=0.222  Sum_probs=348.6

Q ss_pred             CCCCCCCCCccccccccccccCCCCChhhHHHHHHHhcCCceEEcccCccEEEEcChHHHHHHHhcCCCCcccCC-CCch
Q 011242           38 HVPKGTFGLPLLGETLSFLKPHSSNSLGTFLQDHCSRYGKVFKSHLFFTPTVVSCDAELNYFILQNEGKLFQCSY-PKTI  116 (490)
Q Consensus        38 ~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~l~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~-~~~~  116 (490)
                      .+||+|.+||++||++.|.     +++..++.++++||||||++++++.++++|+||+.+++++.++...+.... ...+
T Consensus         1 ~lP~~p~~~P~iG~~~~f~-----~d~~~f~~~~~~kyG~if~~~~~~~~~v~v~~p~~v~~i~~~~~~~~~~~~~~~~~   75 (445)
T d2ciba1           1 ALPRVSGGHDEHGHLEEFR-----TDPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFM   75 (445)
T ss_dssp             CCCBCSCCCBTTBTHHHHT-----TCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEECTTSCGGG
T ss_pred             CCCCCCCCcCcCcCHHHHh-----HCHHHHHHHHHHHHCCEEEEEECCceEEEEcCHHHHHHHHhCCcccccCCccchhh
Confidence            3799999999999999984     389999999999999999999999999999999999999988877666543 3445


Q ss_pred             hhhhcccccccccChhhHHHHHHHhhhccccccchhhHHHHHHHHHHHHHhhcCCCcccHHHHHHHHHHHHHHHHHcCCC
Q 011242          117 PGILGNLSMLVAVGDTHRRLRNAALSLVTITKSKPEFLNDIENFAIQILDSWKDKPQVIFCEEARKFTFNVIVKQVLGLT  196 (490)
Q Consensus       117 ~~~~g~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~  196 (490)
                      ...+|. |++. ++..|+.+|+.+.+.++...+. .+.+.+.+.++++++.|.+++++|+.+.+..+++++++.++||.+
T Consensus        76 ~~~~g~-g~~~-~~~~~~~~~~~~~~~~~~~~l~-~~~~~i~~~~~~~~~~l~~~~~vdl~~~~~~~~~~~~~~~~fG~~  152 (445)
T d2ciba1          76 TPIFGE-GVVF-DASPERRKEMLHNAALRGEQMK-GHAATIEDQVRRMIADWGEAGEIDLLDFFAELTIYTSSACLIGKK  152 (445)
T ss_dssp             HHHHC----------------------CCHHHHH-HHHHHHHHHHHHHHTTCCSEEEEEHHHHHHHHHHHHHHHHHTCHH
T ss_pred             HhhcCC-ceee-cCchHHHHHHHhccccCccccc-cchHHHHHHHHHhhhhcccCCCcchHHhhhhhcceeeeecccccc
Confidence            566675 6554 5677888999999999988888 789999999999999998888999999999999999999999976


Q ss_pred             CCchhhhHHHHHHHHHHh---hhhhccccCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCccCCcchHHHHh
Q 011242          197 PEEPETTKILEDFLTFMK---GLISLPLYIPGTPYARAVKARRRISSTVKAIIEKRRRRSSNNNSADNSEKKNSDFLEIL  273 (490)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~dll~~l  273 (490)
                      ..+.....+.+.+..+..   .+..++.++|....++..++++.+.+++.+.++++++....       .....|+++.|
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~-------~~~~~dll~~l  225 (445)
T d2ciba1         153 FRDQLDGRFAKLYHELERGTDPLAYVDPYLPIESFRRRDEARNGLVALVADIMNGRIANPPT-------DKSDRDMLDVL  225 (445)
T ss_dssp             HHTTCCHHHHHHHHHHHTTCCGGGGTCTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHCC------------CCCHHHHH
T ss_pred             ccchhhhHHHHHHHHhhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhcccccc-------cccccchhhhh
Confidence            554233344444444433   34445556777777888899999999999999988876654       12346899998


Q ss_pred             hc------cCCCChHHHHHHHHHHhhcchhchHHHHHHHHHHHhcCchHHHHHHHHHHHHhhhhcCCCCCCHHhhcCCcc
Q 011242          274 LC------VDTLSEDEKVSFVLDSLLGGYETTSLLMALVVHFLGQSPTALEQLKLEHQTIRSMKQNNEHLNWEDYKKMDF  347 (490)
Q Consensus       274 l~------~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~~  347 (490)
                      ++      ...+++++++++++.+++||++||+.+++|++++|++||++|+++|+||+++.+   .++.++.+++.+|||
T Consensus       226 l~~~~~~~~~~ls~~ei~~~~~~ll~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~---~~~~~~~~~l~~lp~  302 (445)
T d2ciba1         226 IAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYG---DGRSVSFHALRQIPQ  302 (445)
T ss_dssp             HHCBCTTSSBSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHGG---GCCCHHHHTTSCCHH
T ss_pred             hccccccccccCCcchhhhhhhhhhhhccccchhhccccccccccccccccccccccccccc---ccccchhhhcccchh
Confidence            82      235899999999999999999999999999999999999999999999999985   567889999999999


Q ss_pred             HHHHHHhHhccCCCccccceeeccccccCCeeeCCCCEEEecccccccCCCCCCCCCCccCCCCCCCCC----CCCCccc
Q 011242          348 TQNVINEALRYGNVVKFVHRKALKDVKYRDYLIPSGWKVLPVFTAVHLDPSLHANAFQFHPWRWENQDQ----TCKKFTP  423 (490)
Q Consensus       348 l~a~i~E~lRl~~~~~~~~R~~~~~~~~~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~PeRf~~~~~----~~~~~~~  423 (490)
                      |+|||+||+|++|+++...|++.+|+.++||.|||||.|+++.+.+|+||++|+||++|+||||++++.    ....|+|
T Consensus       303 L~a~i~E~lRl~p~~~~~~~~~~~~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~PeRf~~~~~~~~~~~~~~~p  382 (445)
T d2ciba1         303 LENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIP  382 (445)
T ss_dssp             HHHHHHHHHHHSCSCCCEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCGGGGSTTTCHHHHCTTTCCT
T ss_pred             hccccccccccccccceeccccccccccceeeccccccccccccccccCcccCCChhhCCcccccCccccccCCCCcccC
Confidence            999999999999999988899999999999999999999999999999999999999999999997654    3678999


Q ss_pred             cCCCCCCCCChHHHHHHHHHHHHHHHHhceeeecCCCCcccc---C-cccccCCceEEEEecC
Q 011242          424 FGGGSRCCPGSELAKVEVAFFLHHLVQNFRWRNQDEDQPIAY---P-YVEFKRGLVLNVECCS  482 (490)
Q Consensus       424 Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~---~-~~~~~~~~~v~~~~r~  482 (490)
                      ||+|+|.|||++||..|++++++.|+++|||++++++.....   . ...++.+++|++++|+
T Consensus       383 FG~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~Rs  445 (445)
T d2ciba1         383 FGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQPAAVRYRRRT  445 (445)
T ss_dssp             TCCGGGCCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCEECSSSSCEECSCCEEEEEEC-
T ss_pred             CCCCCccChhHHHHHHHHHHHHHHHHHhCEEEECCCCCccccccceEEEccCCCEEEEEEeCc
Confidence            999999999999999999999999999999999875333221   2 2567789999999995
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Back     information, alignment and structure
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora erythraea [TaxId: 1836]} Back     information, alignment and structure
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum [TaxId: 56]} Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase {Fungus (Fusarium oxysporum) [TaxId: 5507]} Back     information, alignment and structure
>d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306]} Back     information, alignment and structure
>d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 111955]} Back     information, alignment and structure
>d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure