Query 011243
Match_columns 490
No_of_seqs 169 out of 1734
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 04:07:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011243.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011243hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qdm_A Prophytepsin; aspartic 100.0 1.3E-80 4.3E-85 662.7 40.6 418 72-490 58-478 (478)
2 2x0b_A Renin; hydrolase-hormon 100.0 4.2E-60 1.4E-64 491.7 33.2 311 72-490 67-383 (383)
3 3psg_A Pepsinogen; hydrolase(a 100.0 5.5E-60 1.9E-64 489.0 33.2 306 72-490 62-370 (370)
4 1tzs_A Cathepsin E; hydrolase, 100.0 3.7E-57 1.3E-61 464.5 34.9 311 72-490 29-342 (351)
5 3k1w_A Renin; protease, altern 100.0 3.6E-57 1.2E-61 462.1 31.3 311 72-490 24-340 (341)
6 1dpj_A Proteinase A; proteinas 100.0 1.1E-56 3.7E-61 456.9 33.9 307 72-490 19-329 (329)
7 4aa9_A Chymosin; hydrolase, as 100.0 6.7E-57 2.3E-61 456.4 32.1 301 72-490 17-320 (320)
8 1htr_B Gastricsin; aspartyl pr 100.0 5.6E-57 1.9E-61 459.0 31.3 308 72-490 18-329 (329)
9 3cms_A Chymosin B; hydrolase, 100.0 1.1E-56 3.8E-61 455.7 32.7 301 72-490 20-323 (323)
10 1am5_A Pepsin, acid proteinase 100.0 1.3E-56 4.5E-61 455.3 31.4 304 72-490 18-324 (324)
11 1miq_A Plasmepsin; aspartic pr 100.0 5.6E-55 1.9E-59 452.2 32.1 300 72-490 68-374 (375)
12 3qvc_A Histo-aspartic protease 100.0 4.7E-55 1.6E-59 462.2 31.6 300 72-490 143-449 (451)
13 1mpp_A Pepsin; hydrolase(acid 100.0 1.4E-54 5E-59 446.6 29.4 305 72-490 24-355 (361)
14 1yg9_A Aspartic protease BLA G 100.0 2.7E-54 9.2E-59 439.7 30.9 298 72-490 23-329 (330)
15 2bju_A Plasmepsin II; aspartic 100.0 3.2E-54 1.1E-58 455.6 30.1 301 72-490 144-450 (453)
16 2apr_A Rhizopuspepsin; hydrola 100.0 2.8E-53 9.5E-58 431.2 35.6 298 72-490 21-324 (325)
17 3c9x_A Trichoderma reesei aspa 100.0 3.1E-53 1.1E-57 431.6 33.7 300 72-489 21-329 (329)
18 3fv3_A SAPP1P-secreted asparti 100.0 2.9E-53 9.9E-58 433.0 32.6 311 46-490 2-329 (339)
19 1oew_A Endothiapepsin; hydrola 100.0 4.7E-53 1.6E-57 430.3 32.1 299 72-489 21-329 (329)
20 2qzx_A Candidapepsin-5; aspart 100.0 3.7E-52 1.3E-56 425.6 33.4 296 72-490 18-331 (342)
21 1j71_A Candidapepsin, aspartic 100.0 3.2E-52 1.1E-56 424.9 32.3 291 72-490 18-324 (334)
22 1ibq_A Aspergillopepsin; aspar 100.0 9.8E-52 3.4E-56 419.9 34.6 298 72-490 20-325 (325)
23 3pvk_A Candidapepsin-2; hydrol 100.0 4.1E-52 1.4E-56 424.9 31.8 297 72-490 18-331 (342)
24 1izd_A Aspartic proteinase; su 100.0 1.9E-51 6.6E-56 417.4 32.8 295 72-490 21-323 (323)
25 1bxo_A Protein (penicillopepsi 100.0 1E-51 3.5E-56 419.3 28.3 295 72-490 21-323 (323)
26 1wkr_A Polyporopepsin; hydrola 100.0 3.3E-50 1.1E-54 410.9 33.1 294 72-490 18-333 (340)
27 3lpj_A Beta-secretase 1; alzhe 100.0 1E-49 3.5E-54 422.8 25.7 308 72-490 80-420 (455)
28 2ewy_A Beta-secretase 2; BACE2 100.0 1.4E-48 4.7E-53 405.0 29.9 306 72-490 19-355 (383)
29 3vf3_A Beta-secretase 1; struc 100.0 5.8E-49 2E-53 410.5 26.7 308 72-490 34-374 (402)
30 2qp8_A Beta-secretase 1; BACE1 100.0 3.6E-48 1.2E-52 403.7 29.1 308 72-490 27-367 (395)
31 3aup_A SBG7S, BG, basic 7S glo 100.0 1.7E-46 5.9E-51 392.1 26.6 304 72-489 27-386 (403)
32 3vla_A EDGP; extracellular, in 100.0 4.1E-46 1.4E-50 390.4 22.7 329 44-489 6-398 (413)
33 1lya_B Cathepsin D; lysosomal 100.0 5.6E-43 1.9E-47 340.4 27.5 241 144-490 1-241 (241)
34 1t6e_X Xylanase inhibitor; two 100.0 2E-43 7E-48 366.2 20.2 308 72-490 20-373 (381)
35 1b5f_A Protein (cardosin A); h 100.0 2.7E-41 9.1E-46 328.8 23.7 218 72-293 19-239 (239)
36 3rfi_A Asp; PSI, saposin, hydr 99.8 5.9E-21 2E-25 162.5 5.7 107 291-399 2-108 (108)
37 1b5f_B Protein (cardosin A); h 99.8 2E-19 6.9E-24 147.1 9.4 87 403-490 1-87 (87)
38 1lya_A Cathepsin D; lysosomal 99.6 1.5E-16 5.1E-21 132.7 7.2 74 72-145 19-96 (97)
39 2qyp_A Proactivator polypeptid 97.5 8.3E-05 2.8E-09 60.4 5.0 40 295-334 45-84 (91)
40 3bqp_A Proactivator polypeptid 97.5 0.0001 3.6E-09 58.0 4.6 38 295-332 42-79 (80)
41 2js9_A Saposin-like protein fa 97.5 5.4E-05 1.8E-09 62.6 2.9 50 283-332 49-99 (99)
42 1nkl_A NK-lysin; saposin fold, 97.4 0.00013 4.5E-09 57.5 4.5 46 284-332 32-77 (78)
43 4ddj_A Saposin-A, protein A; s 97.3 0.00012 4.2E-09 58.3 3.4 41 361-401 3-43 (83)
44 2gtg_A Proactivator polypeptid 97.3 8.9E-05 3E-09 59.1 2.6 37 296-332 45-81 (83)
45 3bqp_A Proactivator polypeptid 97.3 0.00011 3.8E-09 57.8 3.0 47 361-410 2-48 (80)
46 1of9_A Pore-forming peptide am 97.2 0.00012 4.1E-09 57.7 2.2 38 294-331 40-77 (77)
47 4ddj_A Saposin-A, protein A; s 97.2 0.00013 4.4E-09 58.1 2.4 37 296-332 45-82 (83)
48 2qyp_A Proactivator polypeptid 97.2 0.00015 5E-09 58.9 2.5 48 360-410 4-51 (91)
49 1n69_A Saposin B; lipid bindin 97.0 0.00024 8.2E-09 56.4 2.2 37 295-332 44-80 (81)
50 1of9_A Pore-forming peptide am 96.8 0.00062 2.1E-08 53.5 3.2 40 361-401 2-41 (77)
51 2gtg_A Proactivator polypeptid 96.8 0.00084 2.9E-08 53.3 3.4 41 360-400 3-43 (83)
52 1l9l_A Granulysin; saposin fol 96.7 0.00078 2.7E-08 52.5 2.8 33 296-328 41-73 (74)
53 1l9l_A Granulysin; saposin fol 96.6 0.0012 4E-08 51.5 3.0 38 362-400 2-39 (74)
54 1nkl_A NK-lysin; saposin fold, 96.4 0.0013 4.6E-08 51.7 2.2 39 362-400 2-40 (78)
55 3s64_A AC-SLP-1, saposin-like 96.4 0.0032 1.1E-07 50.4 4.4 52 280-331 35-87 (87)
56 1n69_A Saposin B; lipid bindin 96.1 0.0032 1.1E-07 49.8 3.1 47 361-410 3-50 (81)
57 2js9_A Saposin-like protein fa 95.9 0.0011 3.6E-08 54.8 -0.7 52 359-412 19-70 (99)
58 3s8i_A Protein DDI1 homolog 1; 89.3 1.7 5.7E-05 38.1 9.0 27 461-487 107-133 (148)
59 2i1a_A DNA damage-inducible pr 89.1 1.2 4.1E-05 38.5 7.9 26 462-487 109-134 (148)
60 3s64_A AC-SLP-1, saposin-like 51.0 3.3 0.00011 32.9 0.1 37 360-398 9-45 (87)
61 1bxo_A Protein (penicillopepsi 24.9 72 0.0025 30.7 4.9 42 230-281 3-44 (323)
62 1ibq_A Aspergillopepsin; aspar 24.2 70 0.0024 30.8 4.7 41 231-281 3-43 (325)
63 1izd_A Aspartic proteinase; su 22.3 87 0.003 30.1 4.9 42 230-281 3-44 (323)
No 1
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=1.3e-80 Score=662.72 Aligned_cols=418 Identities=72% Similarity=1.293 Sum_probs=362.4
Q ss_pred eeecCCCceEEE---eeccceeEeCCCCCcccccCCCCcccCCCCCceeeCCeEEEEEecCceEEEEEEEEEEEeCCeEe
Q 011243 72 ETMRTPVRRYNL---HGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFFSQDNVKVGDLVV 148 (490)
Q Consensus 72 v~IGTP~Q~~~v---TGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~dGs~~G~~~~Dtv~igg~~v 148 (490)
|+||||||++.| |||+++||++..|.....|..++.|+|+.|+|++..++.|.+.|++|++.|.+++|+|+||+.++
T Consensus 58 i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v 137 (478)
T 1qdm_A 58 IGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACYLHSRYKAGASSTYKKNGKPAAIQYGTGSIAGYFSEDSVTVGDLVV 137 (478)
T ss_dssp EEETTTTEEEEEEEETTCCCCEEEBTTCCSCGGGGGSCCBCGGGCTTCBCCCCEEEEEETTEEEEEEEEEEEEEETTEEE
T ss_pred EEECCCCeEEEEEEcCCCcceEEecCCCCCCccccCCCCCCcccCCCeeeCCcEEEEEcCCCCeEEEEEEEEEEECCeEE
Confidence 999999999999 99999999999996446799999999999999999999999999999999999999999999999
Q ss_pred eeeEEEEEEeeccccccccccceEEecccCccccCCCCchhhhhhhcCCCCCCeEEEEecCCCCCCCCcEEEECCCCCCC
Q 011243 149 KNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDPDH 228 (490)
Q Consensus 149 ~~~~FG~~~~~~~~~~~~~~~~GIlGLG~~~~s~~~~~~~~~~L~~qG~I~~~~FSl~L~~~~~~~~~G~L~fGGiD~~~ 228 (490)
+++.||++....+..+....++||||||++..+.....+++++|++||+|++++||+||++..+....|.|+|||+|+++
T Consensus 138 ~~~~Fg~a~~~~~~~f~~~~~dGIlGLg~~~~s~~~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~ 217 (478)
T 1qdm_A 138 KDQEFIEATKEPGITFLVAKFDGILGLGFKEISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKH 217 (478)
T ss_dssp EEEEEEEEEECCBSHHHHCSSSEEEECSCGGGCGGGCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTS
T ss_pred CCEEEEEEEecCCcccccccccceecccccccccCCCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhh
Confidence 99999999986654455667899999999988776777899999999999999999999986434458999999999999
Q ss_pred cccceEEEeccccceeEEEEceEEEcCeeccccCCCceEEEcCCCCCcccCHHHHHHHHHHhcCCcccchhhhHHHHhhh
Q 011243 229 YKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYG 308 (490)
Q Consensus 229 ~~G~l~~~p~~~~~~w~V~l~~i~vgg~~i~~~~~~~~aiiDSGtt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 308 (490)
|.|++.|+|+...++|.|.+++|.|+++.+.++..+..++|||||+++++|.+++++|.+++++.+.++++|++++++||
T Consensus 218 ~~G~l~~~pv~~~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg 297 (478)
T 1qdm_A 218 YVGEHTYVPVTQKGYWQFDMGDVLVGGKSTGFCAGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYG 297 (478)
T ss_dssp EEEEEEEEEEEEETTEEEEECCEEETTEECSTTTTCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTH
T ss_pred cCCCceEEeccCCCeEEEEEeEEEECCEEEeecCCCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhh
Confidence 99999999999889999999999999998776667889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCchhhhccccccccCCCCCcccceeeeeccCCCCCCCCCCCCcccchhHHHHHHHHHHhhcchhhHHHH
Q 011243 309 KTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNETADQIL 388 (490)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (490)
+.|+++|+++.+|+++|+++++|.+++.+..++++++|.++...+++ +.+...+|.+|||||.|+|+.|++|.|+++|+
T Consensus 298 ~~ii~~l~~~~~p~~vC~~iglC~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~ 376 (478)
T 1qdm_A 298 QQILDLLLAETQPKKICSQVGLCTFDGTRGVSAGIRSVVDDEPVKSN-GLRADPMCSACEMAVVWMQNQLAQNKTQDLIL 376 (478)
T ss_dssp HHHHHHHHTTCCHHHHHHHTTCC----------------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred hHHHHhhhhccChhhhhccccccccCccccccccccccccccccccc-cccccccchHHHHHHHHHHHHHhccccHHHHH
Confidence 99999999999999999999999999999999999999999877664 55888999999999999999999999999999
Q ss_pred HhhhhhccCCCCCCCceeeeCCCCCCCCcEEEEECCEEEEeCcccceEeecccccceeeeeeEecccCCCCCCeeeecHh
Q 011243 389 NYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDV 468 (490)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~c~~~~~~p~l~f~f~g~~~~i~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~ 468 (490)
++++++|.+++...|.|.++|+.+..+|+|+|+|+|+.++|+|++|+++..++....|+++|.+.+++.+.++.||||++
T Consensus 377 ~~~~~~C~~~~~~~g~~~v~C~~~~~lP~i~f~~gg~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~ 456 (478)
T 1qdm_A 377 DYVNQLCNRLPSPMGESAVDCGSLGSMPDIEFTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDV 456 (478)
T ss_dssp HHHHHHTTCBCCSSSCCEECGGGGTTCCCEEEEETTEEEEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHH
T ss_pred HHHHHHhhccCCCCCeEEeecccccccccEEEEECCEEEEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHH
Confidence 99999999999999999999998889999999999999999999999987655456899999988766556789999999
Q ss_pred hhcceeEEEeCCCCeEEEEEcC
Q 011243 469 FMGRYHTVFDYGNLSIGFAEAA 490 (490)
Q Consensus 469 fl~~~y~vfD~~~~~igfa~~~ 490 (490)
|||++|+|||++|+|||||+++
T Consensus 457 fl~~~y~vfD~~~~rIGfA~a~ 478 (478)
T 1qdm_A 457 FMGPYHTVFDYGKLRIGFAKAA 478 (478)
T ss_dssp HHTTEEEEEETTTTEEEEEEEC
T ss_pred HhccEEEEEECCCCEEEEEeCC
Confidence 9999999999999999999986
No 2
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=4.2e-60 Score=491.71 Aligned_cols=311 Identities=41% Similarity=0.795 Sum_probs=279.8
Q ss_pred eeecCCCceEEE---eeccceeEeCCCCCc-ccccCCCCcccCCCCCceeeCCeEEEEEecCceEEEEEEEEEEEeCCeE
Q 011243 72 ETMRTPVRRYNL---HGSSNLWVPSAKCYF-SVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFFSQDNVKVGDLV 147 (490)
Q Consensus 72 v~IGTP~Q~~~v---TGSs~~WV~s~~C~~-~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~dGs~~G~~~~Dtv~igg~~ 147 (490)
|+||||||+|.| |||+++||++..|.. ...|..++.|+|++|+|++..++.|.+.|++|++.|.+++|+|++|+..
T Consensus 67 I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~ 146 (383)
T 2x0b_A 67 IGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQDIITVGGIT 146 (383)
T ss_dssp EEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCEEEEEEEEEEEEETTEE
T ss_pred EEECCCCcEEEEEEeCCCCCeEEeccCCCCCcccccCCCCCCCCCCCcEEECCcEEEEEcCCccEEEEEEeeEEEEcCce
Confidence 999999999999 999999999999962 2579999999999999999999999999999999999999999999999
Q ss_pred eeeeEEEEEEeeccccccccccceEEecccCccccCCCCchhhhhhhcCCCCCCeEEEEecCCCCC--CCCcEEEECCCC
Q 011243 148 VKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEG--EEGGEIVFGGVD 225 (490)
Q Consensus 148 v~~~~FG~~~~~~~~~~~~~~~~GIlGLG~~~~s~~~~~~~~~~L~~qG~I~~~~FSl~L~~~~~~--~~~G~L~fGGiD 225 (490)
++ +.||++....+..+....++||||||++..+.....+++++|++||+|++++||+||++..+. ...|.|+|||+|
T Consensus 147 v~-~~Fg~a~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d 225 (383)
T 2x0b_A 147 VT-QMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSD 225 (383)
T ss_dssp EE-EEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCC
T ss_pred EE-EEEEEEEecCCcccccCCCceEeccCCCccccCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcC
Confidence 99 999999987665566678899999999988877788999999999999999999999986422 148999999999
Q ss_pred CCCcccceEEEeccccceeEEEEceEEEcCeeccccCCCceEEEcCCCCCcccCHHHHHHHHHHhcCCcccchhhhHHHH
Q 011243 226 PDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVD 305 (490)
Q Consensus 226 ~~~~~G~l~~~p~~~~~~w~V~l~~i~vgg~~i~~~~~~~~aiiDSGtt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~ 305 (490)
+++|+|++.|+|+....+|.|.+++|.++++.+. +..+..|+|||||+++++|.+++++|.+++++.
T Consensus 226 ~~~y~G~l~~~pv~~~~~w~v~l~~i~v~~~~~~-~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~------------ 292 (383)
T 2x0b_A 226 PQHYEGNFHYINLIKTGVWQIQMKGVSVGSSTLL-CEDGCLALVDTGASYISGSTSSIEKLMEALGAK------------ 292 (383)
T ss_dssp GGGEEEEEEEEEBSSTTSCEEEECEEEESSCCCB-STTCEEEEECTTCSSEEECHHHHHHHHHHHTCE------------
T ss_pred hHHcCCceEEEEcCCCceEEEEEeEEEeCCceEE-cCCCcEEEEcCCCceEEcCHHHHHHHHHHhCCc------------
Confidence 9999999999999999999999999999998753 457789999999999999999999999999765
Q ss_pred hhhHHHHHHHHhhcCchhhhccccccccCCCCCcccceeeeeccCCCCCCCCCCCCcccchhHHHHHHHHHHhhcchhhH
Q 011243 306 QYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNETAD 385 (490)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (490)
T Consensus 293 -------------------------------------------------------------------------------- 292 (383)
T 2x0b_A 293 -------------------------------------------------------------------------------- 292 (383)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhhhhccCCCCCCCceeeeCCCCCCCCcEEEEECCEEEEeCcccceEeecccccceeeeeeEecccCCCCCCeeee
Q 011243 386 QILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWIL 465 (490)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~p~l~f~f~g~~~~i~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~iL 465 (490)
+ ..|.|.++|+..+.+|+|+|+|+|+.++|+|++|+++..+.+...|+++|.+.+.+.+.++.|||
T Consensus 293 -------------~-~~g~~~v~C~~~~~~P~i~f~~~g~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~IL 358 (383)
T 2x0b_A 293 -------------K-RLFDYVVKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWAL 358 (383)
T ss_dssp -------------E-CSSCEEEEGGGTTTCCCEEEEETTEEEEECHHHHBCCCCCCTTSEEEBSEEECCCCTTTCSCEEE
T ss_pred -------------c-cCCcEEEeccccccCceEEEEECCEEEEECHHHhEeeccCCCCCeEEEEEEecccCCCCCCcEEE
Confidence 1 24678999998889999999999999999999999986644456899999987765455679999
Q ss_pred cHhhhcceeEEEeCCCCeEEEEEcC
Q 011243 466 GDVFMGRYHTVFDYGNLSIGFAEAA 490 (490)
Q Consensus 466 G~~fl~~~y~vfD~~~~~igfa~~~ 490 (490)
|++|||++|+|||++|+|||||+++
T Consensus 359 Gd~Fl~~~y~vfD~~~~rIGfA~a~ 383 (383)
T 2x0b_A 359 GATFIRKFYTEFDRRNNRIGFALAR 383 (383)
T ss_dssp CHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ChHHhcceEEEEECCCCEEeEEEcC
Confidence 9999999999999999999999986
No 3
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=5.5e-60 Score=488.99 Aligned_cols=306 Identities=42% Similarity=0.817 Sum_probs=276.6
Q ss_pred eeecCCCceEEE---eeccceeEeCCCCCcccccCCCCcccCCCCCceeeCCeEEEEEecCceEEEEEEEEEEEeCCeEe
Q 011243 72 ETMRTPVRRYNL---HGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFFSQDNVKVGDLVV 148 (490)
Q Consensus 72 v~IGTP~Q~~~v---TGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~dGs~~G~~~~Dtv~igg~~v 148 (490)
|+||||||++.| |||+++||++..|. ...|..++.|+|++|+|++..++.|.+.|++|++.|.+++|+|++|+..+
T Consensus 62 i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v 140 (370)
T 3psg_A 62 IGIGTPAQDFTVIFDTGSSNLWVPSVYCS-SLACSDHNQFNPDDSSTFEATSQELSITYGTGSMTGILGYDTVQVGGISD 140 (370)
T ss_dssp EEETTTTEEEEEEEETTCCCEEEEBTTCC-SGGGTTSCCBCGGGCTTCEEEEEEEEEESSSCEEEEEEEEEEEEETTEEE
T ss_pred EEEcCCCCEEEEEEeCCCCccEEECCCCC-CcccCCCCCCCCccCcCcEECCcEEEEEeCCceEEEEEEEEEEeeCCccc
Confidence 999999999999 99999999999997 66899999999999999999999999999999999999999999999999
Q ss_pred eeeEEEEEEeeccccccccccceEEecccCccccCCCCchhhhhhhcCCCCCCeEEEEecCCCCCCCCcEEEECCCCCCC
Q 011243 149 KNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDPDH 228 (490)
Q Consensus 149 ~~~~FG~~~~~~~~~~~~~~~~GIlGLG~~~~s~~~~~~~~~~L~~qG~I~~~~FSl~L~~~~~~~~~G~L~fGGiD~~~ 228 (490)
+++.||++....+..+....++||||||++..+....++++++|++||+|++++||+||++. ....|.|+|||+|+++
T Consensus 141 ~~~~Fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~--~~~~G~l~fGg~D~~~ 218 (370)
T 3psg_A 141 TNQIFGLSETEPGSFLYYAPFDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSN--DDSGSVVLLGGIDSSY 218 (370)
T ss_dssp EEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEEC-------CEEEEETCCCGGG
T ss_pred CCeEEEEEEeecccccccCCccceeccCCccccccCCCCHHHHHHHCCCCCCCEEEEEEccC--CCCCeEEEEEeeChHh
Confidence 99999999987665566778899999999998877788999999999999999999999986 3358999999999999
Q ss_pred cccceEEEeccccceeEEEEceEEEcCeeccccCCCceEEEcCCCCCcccCHHHHHHHHHHhcCCcccchhhhHHHHhhh
Q 011243 229 YKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYG 308 (490)
Q Consensus 229 ~~G~l~~~p~~~~~~w~V~l~~i~vgg~~i~~~~~~~~aiiDSGtt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 308 (490)
|+|++.|+|+....+|.|.+++|+++++.+. +..+..|+|||||+++++|.+++++|.+++++.
T Consensus 219 y~g~l~~~pv~~~~~w~v~l~~i~v~g~~~~-~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~--------------- 282 (370)
T 3psg_A 219 YTGSLNWVPVSVEGYWQITLDSITMDGETIA-CSGGCQAIVDTGTSLLTGPTSAIANIQSDIGAS--------------- 282 (370)
T ss_dssp BSSCCEEEECSEETTEEEEECEEESSSSEEE-CTTCEEEEECTTCCSEEEEHHHHHHHHHHTTCE---------------
T ss_pred cCCcceeecccccceeEEEEeEEEECCEEEe-cCCCceEEEcCCCCcEECCHHHHHHHHHHhCCc---------------
Confidence 9999999999999999999999999998775 456789999999999999999999999999766
Q ss_pred HHHHHHHHhhcCchhhhccccccccCCCCCcccceeeeeccCCCCCCCCCCCCcccchhHHHHHHHHHHhhcchhhHHHH
Q 011243 309 KTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNETADQIL 388 (490)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (490)
T Consensus 283 -------------------------------------------------------------------------------- 282 (370)
T 3psg_A 283 -------------------------------------------------------------------------------- 282 (370)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhhhhccCCCCCCCceeeeCCCCCCCCcEEEEECCEEEEeCcccceEeecccccceeeeeeEecccCCCCCCeeeecHh
Q 011243 389 NYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDV 468 (490)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~c~~~~~~p~l~f~f~g~~~~i~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~ 468 (490)
+...|.|.++|+....+|+|+|+|+|++++||+++|+.+ . .+.|++.|.+.+.+...++.||||++
T Consensus 283 ----------~~~~g~~~v~C~~~~~lP~i~f~~~g~~~~l~~~~yi~~-~---~~~C~~~~~~~~~~~~~~~~~ILG~~ 348 (370)
T 3psg_A 283 ----------ENSDGEMVISCSSIDSLPDIVFTIDGVQYPLSPSAYILQ-D---DDSCTSGFEGMDVPTSSGELWILGDV 348 (370)
T ss_dssp ----------ECTTCCEECCGGGGGGCCCEEEEETTEEEEECHHHHEEE-C---SSCEEESEEEECCCTTSCCEEEECHH
T ss_pred ----------ccCCCcEEEECCCcccCCcEEEEECCEEEEECHHHhccc-C---CCEEEEEEEeCCCCCCCCCcEEeChH
Confidence 123567999999888999999999999999999999998 2 24699999987654445568999999
Q ss_pred hhcceeEEEeCCCCeEEEEEcC
Q 011243 469 FMGRYHTVFDYGNLSIGFAEAA 490 (490)
Q Consensus 469 fl~~~y~vfD~~~~~igfa~~~ 490 (490)
|||++|+|||++|+|||||+|+
T Consensus 349 Fl~~~y~vfD~~~~riGfA~a~ 370 (370)
T 3psg_A 349 FIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp HHTTEEEEEETTTTEEEEEEBC
T ss_pred HhcceEEEEECCCCEEEEEEcC
Confidence 9999999999999999999986
No 4
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=3.7e-57 Score=464.51 Aligned_cols=311 Identities=46% Similarity=0.866 Sum_probs=274.9
Q ss_pred eeecCCCceEEE---eeccceeEeCCCCCcccccCCCCcccCCCCCceeeCCeEEEEEecCceEEEEEEEEEEEeCCeEe
Q 011243 72 ETMRTPVRRYNL---HGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFFSQDNVKVGDLVV 148 (490)
Q Consensus 72 v~IGTP~Q~~~v---TGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~dGs~~G~~~~Dtv~igg~~v 148 (490)
|+||||||++.| |||+++||++..|. ...|..++.|+|++|+|++..++.|.+.|++|++.|.+++|+|+||+.++
T Consensus 29 i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~D~v~ig~~~~ 107 (351)
T 1tzs_A 29 ISIGSPPQNFTVIFDTGSSNLWVPSVYCT-SPACKTHSRFQPSQSSTYSQPGQSFSIQYGTGSLSGIIGADQVSVEGLTV 107 (351)
T ss_dssp EEETTTTEEEEEEEETTCCCEEEEBTTCC-SGGGTTSCCBCGGGCTTCBCCSCEEEEESSSCEEEEEEEEEEEEETTEEE
T ss_pred EEECCCCeEEEEEEeCCCcceEEecCCCC-ccccCCCCcCCcccCcceEECCCEEEEEeCCCCeEEEEEEeEEEECCeEE
Confidence 999999999999 99999999999997 56899899999999999999999999999999999999999999999999
Q ss_pred eeeEEEEEEeeccccccccccceEEecccCccccCCCCchhhhhhhcCCCCCCeEEEEecCCCCCCCCcEEEECCCCCCC
Q 011243 149 KNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDPDH 228 (490)
Q Consensus 149 ~~~~FG~~~~~~~~~~~~~~~~GIlGLG~~~~s~~~~~~~~~~L~~qG~I~~~~FSl~L~~~~~~~~~G~L~fGGiD~~~ 228 (490)
+++.||++....+..+.....+||||||++..+.....+++++|++||+|++++||+||++..+....|.|+|||+|+++
T Consensus 108 ~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~ 187 (351)
T 1tzs_A 108 VGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGVTPVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSH 187 (351)
T ss_dssp EEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGGGCCCHHHHHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGG
T ss_pred CCeEEEEEEeccccccccCCCceEEecCCccccccCCCcHHHHHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHH
Confidence 99999999876555455667899999999988777778899999999999999999999987543458999999999999
Q ss_pred cccceEEEeccccceeEEEEceEEEcCeeccccCCCceEEEcCCCCCcccCHHHHHHHHHHhcCCcccchhhhHHHHhhh
Q 011243 229 YKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYG 308 (490)
Q Consensus 229 ~~G~l~~~p~~~~~~w~V~l~~i~vgg~~i~~~~~~~~aiiDSGtt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 308 (490)
|+|++.|+|+....+|.|.+++|.|+++.+. ...+..++|||||++++||.+++++|.+++++.
T Consensus 188 ~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~--------------- 251 (351)
T 1tzs_A 188 FSGSLNWVPVTKQAYWQIALDNIQVGGTVMF-CSEGCQAIVDTGTSLITGPSDKIKQLQNAIGAA--------------- 251 (351)
T ss_dssp BCSCCEEEECSEETTEEEEEEEEEETTEEEE-CTTCEEEEECTTCSSEEECHHHHHHHHHHHTCE---------------
T ss_pred cCCceEEEecCCCceEEEEeCEEEECCceEE-cCCCceEEeccCCcceeCCHHHHHHHHHHhCCc---------------
Confidence 9999999999988999999999999998753 356789999999999999999999999998655
Q ss_pred HHHHHHHHhhcCchhhhccccccccCCCCCcccceeeeeccCCCCCCCCCCCCcccchhHHHHHHHHHHhhcchhhHHHH
Q 011243 309 KTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNETADQIL 388 (490)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (490)
T Consensus 252 -------------------------------------------------------------------------------- 251 (351)
T 1tzs_A 252 -------------------------------------------------------------------------------- 251 (351)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhhhhccCCCCCCCceeeeCCCCCCCCcEEEEECCEEEEeCcccceEeecccccceeeeeeEecccCCCCCCeeeecHh
Q 011243 389 NYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDV 468 (490)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~c~~~~~~p~l~f~f~g~~~~i~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~ 468 (490)
+.. |.|.++|.....+|+|+|+|+|+.++|++++|+++..+.+...|+++|.+.+.+....+.||||++
T Consensus 252 ----------~~~-g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~ 320 (351)
T 1tzs_A 252 ----------PVD-GEYAVECANLNVMPDVTFTINGVPYTLSPTAYTLLDFVDGMQFCSSGFQGLDIHPPAGPLWILGDV 320 (351)
T ss_dssp ----------ECS-SSEEECGGGGGGSCCEEEEETTEEEEECTTTSEECC-----CCEEESEEECCCCTTTCSCEEECHH
T ss_pred ----------ccC-CeEEEeCCCCccCCcEEEEECCEEEEECHHHhEeeccCCCCCeEEEEEEECCCCCCCCCeEEEChH
Confidence 012 568899998778999999999999999999999986543446899999876644345678999999
Q ss_pred hhcceeEEEeCCCCeEEEEEcC
Q 011243 469 FMGRYHTVFDYGNLSIGFAEAA 490 (490)
Q Consensus 469 fl~~~y~vfD~~~~~igfa~~~ 490 (490)
|||++|+|||++++|||||+++
T Consensus 321 fl~~~y~vfD~~~~rigfA~~~ 342 (351)
T 1tzs_A 321 FIRQFYSVFDRGNNRVGLAPAV 342 (351)
T ss_dssp HHHHEEEEEETTTTEEEEEEBC
T ss_pred HhhheEEEEECCCCEEEEEECC
Confidence 9999999999999999999975
No 5
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=3.6e-57 Score=462.10 Aligned_cols=311 Identities=40% Similarity=0.791 Sum_probs=276.8
Q ss_pred eeecCCCceEEE---eeccceeEeCCCCCc-ccccCCCCcccCCCCCceeeCCeEEEEEecCceEEEEEEEEEEEeCCeE
Q 011243 72 ETMRTPVRRYNL---HGSSNLWVPSAKCYF-SVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFFSQDNVKVGDLV 147 (490)
Q Consensus 72 v~IGTP~Q~~~v---TGSs~~WV~s~~C~~-~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~dGs~~G~~~~Dtv~igg~~ 147 (490)
|+||||||++.| |||+++||++..|.. ...|..++.|+|++|+|++..++.|.+.|++|++.|.+++|+|+||+.+
T Consensus 24 i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~G~~~~D~v~ig~~~ 103 (341)
T 3k1w_A 24 IGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQDIITVGGIT 103 (341)
T ss_dssp EEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEEEEEEEEEEEEETTEE
T ss_pred EEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCcccCCCCCCCCcCcCeeECCCEEEEEECCcEEEEEEEEEEEEECCce
Confidence 999999999999 999999999999963 3468889999999999999999999999999999999999999999999
Q ss_pred eeeeEEEEEEeeccccccccccceEEecccCccccCCCCchhhhhhhcCCCCCCeEEEEecCCC--CCCCCcEEEECCCC
Q 011243 148 VKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDI--EGEEGGEIVFGGVD 225 (490)
Q Consensus 148 v~~~~FG~~~~~~~~~~~~~~~~GIlGLG~~~~s~~~~~~~~~~L~~qG~I~~~~FSl~L~~~~--~~~~~G~L~fGGiD 225 (490)
+ ++.||++.......+.....+||||||++..+.....+++++|++||+|++++||+||++.. .....|.|+|||+|
T Consensus 104 v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d 182 (341)
T 3k1w_A 104 V-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSD 182 (341)
T ss_dssp E-EEEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCC
T ss_pred e-eEEEEEEEEccccccccCCcceEEECCchhhcccCCCCHHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccC
Confidence 9 99999999876544556678999999999887777888999999999999999999999864 22458999999999
Q ss_pred CCCcccceEEEeccccceeEEEEceEEEcCeeccccCCCceEEEcCCCCCcccCHHHHHHHHHHhcCCcccchhhhHHHH
Q 011243 226 PDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVD 305 (490)
Q Consensus 226 ~~~~~G~l~~~p~~~~~~w~V~l~~i~vgg~~i~~~~~~~~aiiDSGtt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~ 305 (490)
+++|+|++.|+|+.+..+|.|.+++|.++++.+. ......++|||||++++||++++++|.+++++.
T Consensus 183 ~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~-~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~------------ 249 (341)
T 3k1w_A 183 PQHYEGNFHYINLIKTGVWQIQMKGVSVGSSTLL-CEDGCLALVDTGASYISGSTSSIEKLMEALGAK------------ 249 (341)
T ss_dssp GGGEEEEEEEEECSSTTSCEEEECCEEETTEEEE-CTTCEEEEECTTCSSEEECHHHHHHHHHHHTCE------------
T ss_pred hHHccCceEEEecCCCCEEEEEEeEEEECCEEee-cCCCCEEEEECCCChhcCCHHHHHHHHHHcCCe------------
Confidence 9999999999999999999999999999998753 346789999999999999999999999999765
Q ss_pred hhhHHHHHHHHhhcCchhhhccccccccCCCCCcccceeeeeccCCCCCCCCCCCCcccchhHHHHHHHHHHhhcchhhH
Q 011243 306 QYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNETAD 385 (490)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (490)
T Consensus 250 -------------------------------------------------------------------------------- 249 (341)
T 3k1w_A 250 -------------------------------------------------------------------------------- 249 (341)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhhhhccCCCCCCCceeeeCCCCCCCCcEEEEECCEEEEeCcccceEeecccccceeeeeeEecccCCCCCCeeee
Q 011243 386 QILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWIL 465 (490)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~p~l~f~f~g~~~~i~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~iL 465 (490)
....| |.+||+....+|+|+|+|+|++++|++++|+.+..+.+...|++.+...+.+...++.|||
T Consensus 250 -------------~~~~g-~~~~C~~~~~~p~i~f~f~g~~~~l~~~~~~~~~~~~~~~~C~~~i~~~~~~~~~~~~~iL 315 (341)
T 3k1w_A 250 -------------KRLFD-YVVKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWAL 315 (341)
T ss_dssp -------------ECSSC-EEEEGGGGGGCCCEEEEETTEEEEECHHHHBCCSCCCTTSEEEBSEEECCCCTTTCSCEEE
T ss_pred -------------ecCCC-eEEeCCCCCcCCcEEEEECCEEEEECHHHheeEccCCCCCeEEeEEEecccCCCCCCeEEE
Confidence 01235 9999998778999999999999999999999986654567899999987654445679999
Q ss_pred cHhhhcceeEEEeCCCCeEEEEEcC
Q 011243 466 GDVFMGRYHTVFDYGNLSIGFAEAA 490 (490)
Q Consensus 466 G~~fl~~~y~vfD~~~~~igfa~~~ 490 (490)
|++|||++|+|||++++|||||+++
T Consensus 316 G~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 316 GATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp CHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ChHHhcceEEEEeCCCCEEEEEECC
Confidence 9999999999999999999999986
No 6
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=1.1e-56 Score=456.86 Aligned_cols=307 Identities=43% Similarity=0.826 Sum_probs=273.9
Q ss_pred eeecCCCceEEE---eeccceeEeCCCCCcccccCCCCcccCCCCCceeeCCeEEEEEecCceEEEEEEEEEEEeCCeEe
Q 011243 72 ETMRTPVRRYNL---HGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFFSQDNVKVGDLVV 148 (490)
Q Consensus 72 v~IGTP~Q~~~v---TGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~dGs~~G~~~~Dtv~igg~~v 148 (490)
|+||||||++.| |||+++||++..|. ...|..++.|+|++|+|++..++.|.+.|++|++.|.+++|+|++|+.++
T Consensus 19 i~iGtP~q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~D~v~ig~~~~ 97 (329)
T 1dpj_A 19 ITLGTPPQNFKVILDTGSSNLWVPSNECG-SLACFLHSKYDHEASSSYKANGTEFAIQYGTGSLEGYISQDTLSIGDLTI 97 (329)
T ss_dssp EEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEEEEEEEEEEEEETTEEE
T ss_pred EEECCCCcEEEEEEeCCCcCeEEecCCCC-CcccCCcCcCCcccCcCeEECCcEEEEEECCceEEEEEEEEEEEECCeEE
Confidence 999999999999 99999999999997 45698889999999999999999999999999999999999999999999
Q ss_pred eeeEEEEEEeeccccccccccceEEecccCccccCCCCchhhhhhhcCCCCCCeEEEEecCCCC-CCCCcEEEECCCCCC
Q 011243 149 KNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIE-GEEGGEIVFGGVDPD 227 (490)
Q Consensus 149 ~~~~FG~~~~~~~~~~~~~~~~GIlGLG~~~~s~~~~~~~~~~L~~qG~I~~~~FSl~L~~~~~-~~~~G~L~fGGiD~~ 227 (490)
+++.||+++...+..+.....+||||||++..+.....+++++|++||+|++++||+||++... ....|.|+|||+|++
T Consensus 98 ~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~ 177 (329)
T 1dpj_A 98 PKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDES 177 (329)
T ss_dssp EEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGG
T ss_pred CCeEEEEEEecCccccccCCcceEEEeCCchhhccCCCCHHHHHHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChh
Confidence 9999999998755335556789999999998876667788999999999999999999987531 234799999999999
Q ss_pred CcccceEEEeccccceeEEEEceEEEcCeeccccCCCceEEEcCCCCCcccCHHHHHHHHHHhcCCcccchhhhHHHHhh
Q 011243 228 HYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQY 307 (490)
Q Consensus 228 ~~~G~l~~~p~~~~~~w~V~l~~i~vgg~~i~~~~~~~~aiiDSGtt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 307 (490)
+|+|++.|+|+....+|.|.+++|.++++.+. ..+..++|||||++++||++++++|.+++++.
T Consensus 178 ~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~--~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~-------------- 241 (329)
T 1dpj_A 178 KFKGDITWLPVRRKAYWEVKFEGIGLGDEYAE--LESHGAAIDTGTSLITLPSGLAEMINAEIGAK-------------- 241 (329)
T ss_dssp GEEEEEEEEECSSBTTBEEEEEEEEETTEEEE--CSSCEEEECTTCSCEEECHHHHHHHHHHHTCE--------------
T ss_pred hcCCceEEEEcCCCceEEEEeeeEEECCeEec--CCCccEEeeCCCCcEECCHHHHHHHHHHhCCc--------------
Confidence 99999999999998999999999999998874 35679999999999999999999999998644
Q ss_pred hHHHHHHHHhhcCchhhhccccccccCCCCCcccceeeeeccCCCCCCCCCCCCcccchhHHHHHHHHHHhhcchhhHHH
Q 011243 308 GKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNETADQI 387 (490)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (490)
T Consensus 242 -------------------------------------------------------------------------------- 241 (329)
T 1dpj_A 242 -------------------------------------------------------------------------------- 241 (329)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhhhhccCCCCCCCceeeeCCCCCCCCcEEEEECCEEEEeCcccceEeecccccceeeeeeEecccCCCCCCeeeecH
Q 011243 388 LNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGD 467 (490)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~p~l~f~f~g~~~~i~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~ 467 (490)
....+.|.++|+....+|+|+|+|+|++++|+|++|+.+.. ..|++.|.+.+.+...++.||||+
T Consensus 242 -----------~~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~~----~~C~~~~~~~~~~~~~~~~~iLG~ 306 (329)
T 1dpj_A 242 -----------KGWTGQYTLDCNTRDNLPDLIFNFNGYNFTIGPYDYTLEVS----GSCISAITPMDFPEPVGPLAIVGD 306 (329)
T ss_dssp -----------ECTTSSEEECGGGGGGCCCEEEEETTEEEEECTTTSEEEET----TEEEECEEECCCCTTTCSEEEECH
T ss_pred -----------cCCCCeEEEECCCCCcCCcEEEEECCEEEEECHHHhEecCC----CEEEEEEEecccCCCCCCcEEECh
Confidence 12356799999987789999999999999999999999854 579999987764434567999999
Q ss_pred hhhcceeEEEeCCCCeEEEEEcC
Q 011243 468 VFMGRYHTVFDYGNLSIGFAEAA 490 (490)
Q Consensus 468 ~fl~~~y~vfD~~~~~igfa~~~ 490 (490)
+|||++|+|||++|+|||||+++
T Consensus 307 ~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 307 AFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp HHHTTEEEEEETTTTEEEEEEEC
T ss_pred HHhcceEEEEECCCCEEEEEECC
Confidence 99999999999999999999986
No 7
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=6.7e-57 Score=456.36 Aligned_cols=301 Identities=40% Similarity=0.757 Sum_probs=272.8
Q ss_pred eeecCCCceEEE---eeccceeEeCCCCCcccccCCCCcccCCCCCceeeCCeEEEEEecCceEEEEEEEEEEEeCCeEe
Q 011243 72 ETMRTPVRRYNL---HGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFFSQDNVKVGDLVV 148 (490)
Q Consensus 72 v~IGTP~Q~~~v---TGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~dGs~~G~~~~Dtv~igg~~v 148 (490)
|+||||||++.| |||+++||++..|. ...|..++.|+|++|+|++..++.|.+.|++|++.|.+++|+|+||+.++
T Consensus 17 i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~G~~~~D~v~ig~~~v 95 (320)
T 4aa9_A 17 IYIGTPPQEFTVVFDTGSSDLWVPSIYCK-SNVCKNHHRFDPRKSSTFRNLGKPLSIHYGTGSMEGFLGYDTVTVSNIVD 95 (320)
T ss_dssp EEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEEEEEEEEEEEEETTEEE
T ss_pred EEECCCCeEEEEEEeCCCCceEEcCCCCC-ccccCCCCCCCCCCCcCeEcCCcEEEEEECCcEEEEEEEEEEEEECCEee
Confidence 999999999999 99999999999997 56798899999999999999999999999999999999999999999999
Q ss_pred eeeEEEEEEeeccccccccccceEEecccCccccCCCCchhhhhhhcCCCCCCeEEEEecCCCCCCCCcEEEECCCCCCC
Q 011243 149 KNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDPDH 228 (490)
Q Consensus 149 ~~~~FG~~~~~~~~~~~~~~~~GIlGLG~~~~s~~~~~~~~~~L~~qG~I~~~~FSl~L~~~~~~~~~G~L~fGGiD~~~ 228 (490)
+++.||++....+..+.....+||||||++..+.....+++++|++||+|++++||+||++. ...|.|+|||+|+++
T Consensus 96 ~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~Fs~~l~~~---~~~G~l~fGg~d~~~ 172 (320)
T 4aa9_A 96 PNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVPVFDNMMDRHLVARDLFSVYMDRN---GQGSMLTLGAIDPSY 172 (320)
T ss_dssp EEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCSS---SSCCEEEETCCCGGG
T ss_pred cCeEEEEEEEcccccccccCcccEEecCcccccccCCCCHHHHHHhCCCCCCceEEEEeCCC---CCCeEEEEcccCHHH
Confidence 99999999987664455667899999999988877778899999999999999999999985 348999999999999
Q ss_pred cccceEEEeccccceeEEEEceEEEcCeeccccCCCceEEEcCCCCCcccCHHHHHHHHHHhcCCcccchhhhHHHHhhh
Q 011243 229 YKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYG 308 (490)
Q Consensus 229 ~~G~l~~~p~~~~~~w~V~l~~i~vgg~~i~~~~~~~~aiiDSGtt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 308 (490)
++|++.|+|+.+..+|.|.+++|.++++.+. ......++|||||++++||++++++|.+++++.
T Consensus 173 ~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~-~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~--------------- 236 (320)
T 4aa9_A 173 YTGSLHWVPVTLQQYWQFTVDSVTINGVAVA-CVGGCQAILDTGTSVLFGPSSDILKIQMAIGAT--------------- 236 (320)
T ss_dssp EEEEEEEEECSSBTTBEEEECEEEETTEEEE-STTCEEEEECTTCSSEEEEHHHHHHHHHHTTCE---------------
T ss_pred ccCceEEEEcccCCceEEEEeEEEECCEEec-cCCCcEEEEECCCCcEECCHHHHHHHHHHhCCc---------------
Confidence 9999999999999999999999999998875 345789999999999999999999999999655
Q ss_pred HHHHHHHHhhcCchhhhccccccccCCCCCcccceeeeeccCCCCCCCCCCCCcccchhHHHHHHHHHHhhcchhhHHHH
Q 011243 309 KTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNETADQIL 388 (490)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (490)
T Consensus 237 -------------------------------------------------------------------------------- 236 (320)
T 4aa9_A 237 -------------------------------------------------------------------------------- 236 (320)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhhhhccCCCCCCCceeeeCCCCCCCCcEEEEECCEEEEeCcccceEeecccccceeeeeeEecccCCCCCCeeeecHh
Q 011243 389 NYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDV 468 (490)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~c~~~~~~p~l~f~f~g~~~~i~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~ 468 (490)
+...|.|.++|+....+|+|+|+|+|++++|++++|+.+ ....|++.|... ..++.||||++
T Consensus 237 ----------~~~~g~~~~~C~~~~~~p~i~f~f~g~~~~l~~~~y~~~----~~~~C~~~i~~~----~~~~~~ilG~~ 298 (320)
T 4aa9_A 237 ----------ENRYGEFDVNCGNLRSMPTVVFEINGRDYPLSPSAYTSK----DQGFCTSGFQGD----NNSELWILGDV 298 (320)
T ss_dssp ----------ECTTSCEEECGGGGGGCCCEEEEETTEEEEECHHHHEEE----ETTEEEESEEEE----TTCCCEEECHH
T ss_pred ----------ccCCCcEEEeCCCCCcCceEEEEECCEEEEECHHHhccC----CCCeEEEEEEcC----CCCCcEEEChH
Confidence 123467999999888899999999999999999999976 235899998863 24468999999
Q ss_pred hhcceeEEEeCCCCeEEEEEcC
Q 011243 469 FMGRYHTVFDYGNLSIGFAEAA 490 (490)
Q Consensus 469 fl~~~y~vfD~~~~~igfa~~~ 490 (490)
|||++|+|||++++|||||+||
T Consensus 299 fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 299 FIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp HHTTEEEEEETTTTEEEEEEEC
T ss_pred HhcceEEEEECCCCEEEEEecC
Confidence 9999999999999999999986
No 8
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=5.6e-57 Score=458.99 Aligned_cols=308 Identities=40% Similarity=0.796 Sum_probs=275.3
Q ss_pred eeecCCCceEEE---eeccceeEeCCCCCcccccCCCCcccCCCCCceeeCCeEEEEEecCceEEEEEEEEEEEeCCeEe
Q 011243 72 ETMRTPVRRYNL---HGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFFSQDNVKVGDLVV 148 (490)
Q Consensus 72 v~IGTP~Q~~~v---TGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~dGs~~G~~~~Dtv~igg~~v 148 (490)
|+||||||++.| |||+++||++..|. ...|..++.|+|++|+|++..++.|.+.|++|++.|.+++|+|++|+.++
T Consensus 18 i~iGtP~q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~G~~~~D~v~~g~~~~ 96 (329)
T 1htr_B 18 ISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-SQACTSHSRFNPSESSTYSTNGQTFSLQYGSGSLTGFFGYDTLTVQSIQV 96 (329)
T ss_dssp EEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEEEEEEEEEEEEETTEEE
T ss_pred EEECCCCcEEEEEEcCCCccEEEecCCCC-CcccCCCCcCCCccCCCeEECCcEEEEEeCCCCeEEEEEeeeEEEcceEE
Confidence 999999999999 99999999999996 45798899999999999999999999999999999999999999999999
Q ss_pred eeeEEEEEEeeccccccccccceEEecccCccccCCCCchhhhhhhcCCCCCCeEEEEecCCCCCCCCcEEEECCCCCCC
Q 011243 149 KNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDPDH 228 (490)
Q Consensus 149 ~~~~FG~~~~~~~~~~~~~~~~GIlGLG~~~~s~~~~~~~~~~L~~qG~I~~~~FSl~L~~~~~~~~~G~L~fGGiD~~~ 228 (490)
+++.||++....+..+.....+||||||++..+.....+++++|++||+|++++||+||++... ...|.|+|||+|+++
T Consensus 97 ~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~L~~~~~-~~~G~l~fGg~d~~~ 175 (329)
T 1htr_B 97 PNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQGMVQEGALTSPVFSVYLSNQQG-SSGGAVVFGGVDSSL 175 (329)
T ss_dssp EEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTCCSHHHHHHHTTCSSSSEEEEEECSSCS-SEEEEEEESSCCGGG
T ss_pred CceEEEEEEEccccccccCCCceEEecCCCcccccCCCCHHHHHHhcCCCCCCEEEEEEcCCCC-CCCcEEEEcccCHHH
Confidence 9999999987755445566789999999998887777889999999999999999999998642 247999999999999
Q ss_pred cccceEEEeccccceeEEEEceEEEcCeeccccCCCceEEEcCCCCCcccCHHHHHHHHHHhcCCcccchhhhHHHHhhh
Q 011243 229 YKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYG 308 (490)
Q Consensus 229 ~~G~l~~~p~~~~~~w~V~l~~i~vgg~~i~~~~~~~~aiiDSGtt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 308 (490)
|+|++.|+|+....+|.|.+++|+++++.+.....+..++|||||++++||++++++|.+++++.
T Consensus 176 ~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~--------------- 240 (329)
T 1htr_B 176 YTGQIYWAPVTQELYWQIGIEEFLIGGQASGWCSEGCQAIVDTGTSLLTVPQQYMSALLQATGAQ--------------- 240 (329)
T ss_dssp EEEEEEEEEBCSSSSCEEEECEEEETTEECCTTTTCEEEEECTTCCSEEEEGGGHHHHHHHHTCE---------------
T ss_pred cCCceEEEECCCCceEEEEEeEEEECCceeeecCCCceEEEecCCccEECCHHHHHHHHHHhCCe---------------
Confidence 99999999999889999999999999987643456789999999999999999999999998665
Q ss_pred HHHHHHHHhhcCchhhhccccccccCCCCCcccceeeeeccCCCCCCCCCCCCcccchhHHHHHHHHHHhhcchhhHHHH
Q 011243 309 KTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNETADQIL 388 (490)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (490)
T Consensus 241 -------------------------------------------------------------------------------- 240 (329)
T 1htr_B 241 -------------------------------------------------------------------------------- 240 (329)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhhhhccCCCCCCCceeeeCCCCCCCCcEEEEECCEEEEeCcccceEeecccccceeeeeeEecccCCCCCC-eeeecH
Q 011243 389 NYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGP-LWILGD 467 (490)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~c~~~~~~p~l~f~f~g~~~~i~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~-~~iLG~ 467 (490)
....|.|.++|.....+|+|+|+|+|++++|+|++|+.+.. +.|+++|.+.+.+.+.++ .||||+
T Consensus 241 ----------~~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~~----g~C~~~~~~~~~~~~~~~~~~iLG~ 306 (329)
T 1htr_B 241 ----------EDEYGQFLVNCNSIQNLPSLTFIINGVEFPLPPSSYILSNN----GYCTVGVEPTYLSSQNGQPLWILGD 306 (329)
T ss_dssp ----------ECTTSCEEECGGGGGGSCCEEEEETTEEEEECHHHHEEECS----SCEEESEEEECCCCTTSSCEEEECH
T ss_pred ----------ecCCCeEEEeCCCcccCCcEEEEECCEEEEECHHHhcccCC----CEEEEEEEECCCCCCCCCceEEECh
Confidence 01245688999987789999999999999999999999865 389999987764434456 899999
Q ss_pred hhhcceeEEEeCCCCeEEEEEcC
Q 011243 468 VFMGRYHTVFDYGNLSIGFAEAA 490 (490)
Q Consensus 468 ~fl~~~y~vfD~~~~~igfa~~~ 490 (490)
+|||++|+|||++++|||||+++
T Consensus 307 ~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 307 VFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp HHHTTEEEEEETTTTEEEEEEEC
T ss_pred HHhccEEEEEECCCCEEEEEeCC
Confidence 99999999999999999999986
No 9
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=1.1e-56 Score=455.74 Aligned_cols=301 Identities=40% Similarity=0.739 Sum_probs=270.0
Q ss_pred eeecCCCceEEE---eeccceeEeCCCCCcccccCCCCcccCCCCCceeeCCeEEEEEecCceEEEEEEEEEEEeCCeEe
Q 011243 72 ETMRTPVRRYNL---HGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFFSQDNVKVGDLVV 148 (490)
Q Consensus 72 v~IGTP~Q~~~v---TGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~dGs~~G~~~~Dtv~igg~~v 148 (490)
|+||||||++.| |||+++||++..|. ...|..++.|+|++|+|++..++.|.+.|++|++.|.+++|+|++|+.++
T Consensus 20 i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~D~v~ig~~~~ 98 (323)
T 3cms_A 20 IYLGTPPQEFTVLFDTGSSDFWVPSIYCK-SNACKNHQRFDPRKSSTFQNLGKPLSIHYGTGSMQGILGYDTVTVSNIVD 98 (323)
T ss_dssp EEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEEEEEEEEEEEEETTEEE
T ss_pred EEECCCCeEEEEEEeCCccceEEcCCCCC-cccccCCCCCCCccCCCeEECCcEEEEEeCCCCeEEEEEEEEEEECCeEE
Confidence 999999999999 99999999999996 56899899999999999999999999999999999999999999999999
Q ss_pred eeeEEEEEEeeccccccccccceEEecccCccccCCCCchhhhhhhcCCCCCCeEEEEecCCCCCCCCcEEEECCCCCCC
Q 011243 149 KNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDPDH 228 (490)
Q Consensus 149 ~~~~FG~~~~~~~~~~~~~~~~GIlGLG~~~~s~~~~~~~~~~L~~qG~I~~~~FSl~L~~~~~~~~~G~L~fGGiD~~~ 228 (490)
+++.||++....+..+.....+||||||++..+....++++++|++||+|.+++||+||++.+. .|.|+|||+|+++
T Consensus 99 ~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~q~~i~~~~FS~~l~~~~~---~G~l~fGg~d~~~ 175 (323)
T 3cms_A 99 IQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEYSIPVFDNMMNRHLVAQDLFSVYMDRNGQ---ESMLTLGAIDPSY 175 (323)
T ss_dssp EEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCTTSS---CEEEEESCCCGGG
T ss_pred eccEEEEEEecccccccccCCceEEecCcchhhccCCCCHHHHHHHCCCCCCCEEEEEECCCCC---CEEEEECCCChhh
Confidence 9999999998755445456779999999998887778899999999999999999999988632 3999999999999
Q ss_pred cccceEEEeccccceeEEEEceEEEcCeeccccCCCceEEEcCCCCCcccCHHHHHHHHHHhcCCcccchhhhHHHHhhh
Q 011243 229 YKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYG 308 (490)
Q Consensus 229 ~~G~l~~~p~~~~~~w~V~l~~i~vgg~~i~~~~~~~~aiiDSGtt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 308 (490)
++|++.|+|+....+|.|.+++|.++++.+. ...+..++|||||++++||++++++|.+++++..
T Consensus 176 ~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~-------------- 240 (323)
T 3cms_A 176 YTGSLHWVPVTVQQYWQFTVDSVTISGVVVA-CEGGCQAILDTGTSKLVGPSSDILNIQQAIGATQ-------------- 240 (323)
T ss_dssp EEEEEEEEECSSBTTBEEEEEEEEETTEEEE-STTCEEEEECTTCCSEEECHHHHHHHHHHHTCEE--------------
T ss_pred ccCceEEEECccCCeEEEEEeeEEECCEEee-cCCCcEEEEecCCccEeCCHHHHHHHHHHhCCee--------------
Confidence 9999999999998999999999999998775 3467899999999999999999999999986550
Q ss_pred HHHHHHHHhhcCchhhhccccccccCCCCCcccceeeeeccCCCCCCCCCCCCcccchhHHHHHHHHHHhhcchhhHHHH
Q 011243 309 KTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNETADQIL 388 (490)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (490)
T Consensus 241 -------------------------------------------------------------------------------- 240 (323)
T 3cms_A 241 -------------------------------------------------------------------------------- 240 (323)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhhhhccCCCCCCCceeeeCCCCCCCCcEEEEECCEEEEeCcccceEeecccccceeeeeeEecccCCCCCCeeeecHh
Q 011243 389 NYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDV 468 (490)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~c~~~~~~p~l~f~f~g~~~~i~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~ 468 (490)
...+.|.++|.....+|+|+|+|+|+.++|+|++|+.+ ....|++.|.+.+ .++.||||++
T Consensus 241 -----------~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~----~~~~C~~~i~~~~----~~~~~iLG~~ 301 (323)
T 3cms_A 241 -----------NQYGEFDIDCDNLSYMPTVVFEINGKMYPLTPSAYTSQ----DQGFCTSGFQSEN----HSQKWILGDV 301 (323)
T ss_dssp -----------ETTTEEEECTTCTTTSCCEEEEETTEEEEECHHHHEEE----ETTEEEESEEEC-------CCEEECHH
T ss_pred -----------cCCCcEEEECCCCccCceEEEEECCEEEEECHHHhccC----CCCEEEEEEEeCC----CCCcEEECHH
Confidence 12456889999888999999999999999999999998 2368999888643 3468999999
Q ss_pred hhcceeEEEeCCCCeEEEEEcC
Q 011243 469 FMGRYHTVFDYGNLSIGFAEAA 490 (490)
Q Consensus 469 fl~~~y~vfD~~~~~igfa~~~ 490 (490)
|||++|+|||++|+|||||+++
T Consensus 302 fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 302 FIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp HHTTEEEEEETTTTEEEEEEEC
T ss_pred HhhceEEEEECCCCEEEEEECC
Confidence 9999999999999999999986
No 10
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=1.3e-56 Score=455.33 Aligned_cols=304 Identities=39% Similarity=0.730 Sum_probs=272.8
Q ss_pred eeecCCCceEEE---eeccceeEeCCCCCcccccCCCCcccCCCCCceeeCCeEEEEEecCceEEEEEEEEEEEeCCeEe
Q 011243 72 ETMRTPVRRYNL---HGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFFSQDNVKVGDLVV 148 (490)
Q Consensus 72 v~IGTP~Q~~~v---TGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~dGs~~G~~~~Dtv~igg~~v 148 (490)
|+||||||++.| |||+++||++..|. ...|..++.|+|++|+|++..++.|.+.|++|++.|.+++|+|++|+.++
T Consensus 18 i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~D~v~~g~~~~ 96 (324)
T 1am5_A 18 ISIGTPPESFKVIFDTGSSNLWVSSSHCS-AQACSNHNKFKPRQSSTYVETGKTVDLTYGTGGMRGILGQDTVSVGGGSD 96 (324)
T ss_dssp EEETTTTEEEEEEEETTCCCEEECBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCEEEEEEEEEEEESSSSCE
T ss_pred EEECCCCeEEEEEEeCCCcceEEecCCCC-cccccCCCcCCCccCCCeEeCCcEEEEEECCCCeEEEEEECceeECCcEE
Confidence 999999999999 99999999999996 45798899999999999999999999999999999999999999999999
Q ss_pred eeeEEEEEEeeccccccccccceEEecccCccccCCCCchhhhhhhcCCCCCCeEEEEecCCCCCCCCcEEEECCCCCCC
Q 011243 149 KNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDPDH 228 (490)
Q Consensus 149 ~~~~FG~~~~~~~~~~~~~~~~GIlGLG~~~~s~~~~~~~~~~L~~qG~I~~~~FSl~L~~~~~~~~~G~L~fGGiD~~~ 228 (490)
+++.||++....+..+.....+||||||++..+.....+++++|++||+|++++||+||++.+ ...|.|+|||+|+++
T Consensus 97 ~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~--~~~G~l~fGg~d~~~ 174 (324)
T 1am5_A 97 PNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGG--ANGSEVMLGGVDNSH 174 (324)
T ss_dssp EEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEECCSTT--CSCEEEEESSCCGGG
T ss_pred cccEEEEEEecccccccCCCCceEEecCCccccccCCCchHHhHHhcCCCCCCEEEEEecCCC--CCCcEEEECccCHHH
Confidence 999999999876544556678999999999887777788999999999999999999999863 348999999999999
Q ss_pred cccceEEEeccccceeEEEEceEEEcCeeccccCCCceEEEcCCCCCcccCHHHHHHHHHHhcCCcccchhhhHHHHhhh
Q 011243 229 YKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYG 308 (490)
Q Consensus 229 ~~G~l~~~p~~~~~~w~V~l~~i~vgg~~i~~~~~~~~aiiDSGtt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 308 (490)
++|++.|+|+....+|.|.+++|+++++.+. ... ..++|||||++++||++++++|.+++++.
T Consensus 175 ~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~-~~aiiDSGTt~~~lp~~~~~~l~~~~~~~--------------- 237 (324)
T 1am5_A 175 YTGSIHWIPVTAEKYWQVALDGITVNGQTAA-CEG-CQAIVDTGTSKIVAPVSALANIMKDIGAS--------------- 237 (324)
T ss_dssp BCSCCEEEEEEEETTEEEEECEEEETTEECC-CCC-EEEEECTTCSSEEECTTTHHHHHHHHTCE---------------
T ss_pred cCCceEEEecCCCcEEEEEEeEEEECCceee-ccC-ceEEEecCCccEECCHHHHHHHHHHhCCc---------------
Confidence 9999999999988999999999999998764 223 89999999999999999999999988432
Q ss_pred HHHHHHHHhhcCchhhhccccccccCCCCCcccceeeeeccCCCCCCCCCCCCcccchhHHHHHHHHHHhhcchhhHHHH
Q 011243 309 KTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNETADQIL 388 (490)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (490)
T Consensus 238 -------------------------------------------------------------------------------- 237 (324)
T 1am5_A 238 -------------------------------------------------------------------------------- 237 (324)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhhhhccCCCCCCCceeeeCCCCCCCCcEEEEECCEEEEeCcccceEeecccccceeeeeeEecccCCCCCCeeeecHh
Q 011243 389 NYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDV 468 (490)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~c~~~~~~p~l~f~f~g~~~~i~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~ 468 (490)
...|.|.++|.....+|+|+|+|+|++++|+|++|+.+. ...|+++|.+.+.+...++.||||++
T Consensus 238 -----------~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~----~~~C~~~~~~~~~~~~~~~~~ilG~~ 302 (324)
T 1am5_A 238 -----------ENQGEMMGNCASVQSLPDITFTINGVKQPLPPSAYIEGD----QAFCTSGLGSSGVPSNTSELWIFGDV 302 (324)
T ss_dssp -----------ECCCCEECCTTSSSSSCCEEEEETTEEEEECHHHHEEES----SSCEEECEEECCSCCSSSCEEEECHH
T ss_pred -----------ccCCcEEEeCCCcccCCcEEEEECCEEEEECHHHhcccC----CCeEEEEEEECccCCCCCCcEEEChH
Confidence 023568899998889999999999999999999999986 35899999877644345679999999
Q ss_pred hhcceeEEEeCCCCeEEEEEcC
Q 011243 469 FMGRYHTVFDYGNLSIGFAEAA 490 (490)
Q Consensus 469 fl~~~y~vfD~~~~~igfa~~~ 490 (490)
|||++|+|||++++|||||+++
T Consensus 303 fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 303 FLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp HHHHEEEEEETTTTEEEEEEBC
T ss_pred HhccEEEEEECCCCEEEEEECC
Confidence 9999999999999999999986
No 11
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=5.6e-55 Score=452.25 Aligned_cols=300 Identities=34% Similarity=0.645 Sum_probs=269.1
Q ss_pred eeecCCCceEEE---eeccceeEeCCCCCcccccCCCCcccCCCCCceeeCCeEEEEEecCceEEEEEEEEEEEeCCeEe
Q 011243 72 ETMRTPVRRYNL---HGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFFSQDNVKVGDLVV 148 (490)
Q Consensus 72 v~IGTP~Q~~~v---TGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~dGs~~G~~~~Dtv~igg~~v 148 (490)
|+||||||++.| |||+++||++..|. ...|..++.|+|+.|+|++..++.|.+.|++|++.|.+++|+|++|+.++
T Consensus 68 i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v 146 (375)
T 1miq_A 68 GEVGDNHQKFMLIFDTGSANLWVPSKKCN-SSGCSIKNLYDSSKSKSYEKDGTKVDITYGSGTVKGFFSKDLVTLGHLSM 146 (375)
T ss_dssp CEETTTTEECCEEEETTCCCEEEEBTTCC-SSGGGGSCCBCGGGCTTCEEEEEEEEEEETTEEEEEEEEEEEEEETTEEE
T ss_pred EEECCCCeEEEEEEeCCCcceEEccCCCC-cccccCCCcCCCccCCceEECCcEEEEEeCCCeEEEEEEEEEEEEcCceE
Confidence 999999999988 99999999999996 56899999999999999999999999999999999999999999999999
Q ss_pred eeeEEEEEEe----eccccccccccceEEecccCccccCCCCchhhhhhhcCCCCCCeEEEEecCCCCCCCCcEEEECCC
Q 011243 149 KNQDFIEATK----EASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGV 224 (490)
Q Consensus 149 ~~~~FG~~~~----~~~~~~~~~~~~GIlGLG~~~~s~~~~~~~~~~L~~qG~I~~~~FSl~L~~~~~~~~~G~L~fGGi 224 (490)
++ .||++.. .. .+.....+||||||++..+.....+++++|++||+|.+++||+||++.+ ...|.|+|||+
T Consensus 147 ~~-~Fg~~~~~~~~~~--~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~--~~~G~l~fGg~ 221 (375)
T 1miq_A 147 PY-KFIEVTDTDDLEP--IYSSVEFDGILGLGWKDLSIGSIDPIVVELKNQNKIDNALFTFYLPVHD--VHAGYLTIGGI 221 (375)
T ss_dssp EE-EEEEEEECGGGTT--HHHHSCCCEEEECSSCCTTCSSCCCHHHHHHHTTSSSSSEEEEECCTTC--TTEEEEEESSC
T ss_pred Cc-EEEEEEecccccc--ccccCCCceEEeCCCCcccccCCCCHHHHHHhccCcCCCEEEEEecCCC--CCCeEEEEccc
Confidence 99 9999998 43 3445667999999999888777888999999999999999999999863 35899999999
Q ss_pred CCCCcccceEEEeccccceeEEEEceEEEcCeeccccCCCceEEEcCCCCCcccCHHHHHHHHHHhcCCcccchhhhHHH
Q 011243 225 DPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLV 304 (490)
Q Consensus 225 D~~~~~G~l~~~p~~~~~~w~V~l~~i~vgg~~i~~~~~~~~aiiDSGtt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~ 304 (490)
|+++|+|++.|+|+....+|.|.++ |.++++.+ .+..++|||||++++||.+++++|.+++++.
T Consensus 222 d~~~~~g~l~~~p~~~~~~w~v~l~-i~v~g~~~----~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~----------- 285 (375)
T 1miq_A 222 EEKFYEGNITYEKLNHDLYWQIDLD-VHFGKQTM----EKANVIVDSGTTTITAPSEFLNKFFANLNVI----------- 285 (375)
T ss_dssp CGGGEEEEEEEEEBSSSSSSEEEEE-EEETTEEE----EEEEEEECTTBSSEEECHHHHHHHHHHHTCE-----------
T ss_pred CHHHcCCceEEEecCCCceEEEEEE-EEECCEEc----ccceEEecCCCccEEcCHHHHHHHHHHhCCc-----------
Confidence 9999999999999998999999999 99999876 5678999999999999999999999999664
Q ss_pred HhhhHHHHHHHHhhcCchhhhccccccccCCCCCcccceeeeeccCCCCCCCCCCCCcccchhHHHHHHHHHHhhcchhh
Q 011243 305 DQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNETA 384 (490)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (490)
T Consensus 286 -------------------------------------------------------------------------------- 285 (375)
T 1miq_A 286 -------------------------------------------------------------------------------- 285 (375)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhhhhccCCCCCCCceeeeCCCCCCCCcEEEEECCEEEEeCcccceEeecccccceeeeeeEecccCCCCCCeee
Q 011243 385 DQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWI 464 (490)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~p~l~f~f~g~~~~i~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~i 464 (490)
.+...|.|.++|.. ..+|+|+|+|+|+.++|+|++|+.+....+...|+++|.+.+. ..+.||
T Consensus 286 -------------~~~~~g~~~~~C~~-~~~P~i~f~f~g~~~~l~~~~yi~~~~~~g~~~C~~~~~~~~~---~~~~~I 348 (375)
T 1miq_A 286 -------------KVPFLPFYVTTCDN-KEMPTLEFKSANNTYTLEPEYYMNPILEVDDTLCMITMLPVDI---DSNTFI 348 (375)
T ss_dssp -------------ECTTSSCEEEETTC-TTCCCEEEECSSCEEEECGGGSEEESSSSSCSEEEESEEECCS---SSSEEE
T ss_pred -------------ccCCCCeEEEECCC-CCCCcEEEEECCEEEEECHHHhEeeccCCCCCeEEEEEEECCC---CCCcEE
Confidence 01235679999997 7899999999999999999999998654344689999987542 136899
Q ss_pred ecHhhhcceeEEEeCCCCeEEEEEcC
Q 011243 465 LGDVFMGRYHTVFDYGNLSIGFAEAA 490 (490)
Q Consensus 465 LG~~fl~~~y~vfD~~~~~igfa~~~ 490 (490)
||++|||++|+|||++++|||||+++
T Consensus 349 LG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 349 LGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp ECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred ECHHHhccEEEEEECCCCEEEEEEcC
Confidence 99999999999999999999999985
No 12
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=4.7e-55 Score=462.20 Aligned_cols=300 Identities=31% Similarity=0.571 Sum_probs=270.6
Q ss_pred eeecCCCceEEE---eeccceeEeCCCCCcccccCCCCcccCCCCCceeeCCeEEEEEecCceEEEEEEEEEEEeCCeEe
Q 011243 72 ETMRTPVRRYNL---HGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFFSQDNVKVGDLVV 148 (490)
Q Consensus 72 v~IGTP~Q~~~v---TGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~dGs~~G~~~~Dtv~igg~~v 148 (490)
|+||||||++.| |||+++||++..|. ...|..++.|+|+.|+|++..++.+.+.|++|++.|.+++|+|++|+.++
T Consensus 143 I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~-s~~C~~~~~ydps~SsT~~~~~~~f~i~YgdGs~~G~~~~Dtv~igg~~v 221 (451)
T 3qvc_A 143 AKLGDNGQKFNFLFHTASSNVWVPSIKCT-SESCESKNHYDSSKSKTYEKDDTPVKLTSKAGTISGIFSKDLVTIGKLSV 221 (451)
T ss_dssp EEETTTTEEEEEEEESSBCSEEEEBTTCC-SGGGTTSCCBCGGGCTTCEEEEEEEEEECSSEEEEEEEEEEEEEETTEEE
T ss_pred EEECCCCcEEEEEEcCCCccEEEecCCCC-ccccCCCCCCCCCCCcccccCCCEEEEEECCCEEEEEEEEEEEEECCEEE
Confidence 999999999999 99999999999996 56899999999999999999999999999999999999999999999999
Q ss_pred eeeEEEEEEe----eccccccccccceEEecccCccccCCCCchhhhhhhcCCCCCCeEEEEecCCCCCCCCcEEEECCC
Q 011243 149 KNQDFIEATK----EASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGV 224 (490)
Q Consensus 149 ~~~~FG~~~~----~~~~~~~~~~~~GIlGLG~~~~s~~~~~~~~~~L~~qG~I~~~~FSl~L~~~~~~~~~G~L~fGGi 224 (490)
+ +.||+++. ..+ +.....+||||||++..+.....+++++|++||+|++++||+||++.+ ...|.|+|||+
T Consensus 222 ~-~~Fg~a~~t~~~~~~--f~~~~~dGILGLg~~~~s~~~~~~~~~~L~~qg~I~~~~FS~~L~~~~--~~~G~l~fGgi 296 (451)
T 3qvc_A 222 P-YKFIEMTEIVGFEPF--YSESDVDGVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSIYLPPEN--KNKGYLTIGGI 296 (451)
T ss_dssp E-EEEEEEEEEEECTTH--HHHSCCCEEEECSSBCSSSSCCCCHHHHHHHTTSSSSSEEEEECCTTC--TTEEEEEESSC
T ss_pred E-EEEEEEEeccccCCC--ccCCCCCEEEecCCCcccccCCCCHHHHHHHcCCCCCCEEEEEEcCCC--CCCCEEEECCc
Confidence 9 99999988 433 445567999999999888777788999999999999999999999873 35899999999
Q ss_pred CCCCcccceEEEeccccceeEEEEceEEEcCeeccccCCCceEEEcCCCCCcccCHHHHHHHHHHhcCCcccchhhhHHH
Q 011243 225 DPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLV 304 (490)
Q Consensus 225 D~~~~~G~l~~~p~~~~~~w~V~l~~i~vgg~~i~~~~~~~~aiiDSGtt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~ 304 (490)
|+++++|++.|+|+.+..+|.|.++ |.+++. ......++|||||+++++|++++++|.+++++..
T Consensus 297 D~s~y~G~l~~~pv~~~~~w~v~l~-I~Vgg~----~~~~~~aiiDSGTt~i~lP~~~~~~i~~~i~a~~---------- 361 (451)
T 3qvc_A 297 EERFFDGPLNYEKLNHDLMWQVDLD-VHFGNV----SSKKANVILDSATSVITVPTEFFNQFVESASVFK---------- 361 (451)
T ss_dssp CGGGEEEEEEEEECSSTTSSEEEEE-EEETTE----EEEEEEEEECTTBSSEEECHHHHHHHHTTTTCEE----------
T ss_pred chhhcCCceEEEEcccCCeeEEEEE-EEECCc----cCCCceEEEeCCCccccCCHHHHHHHHHHcCCee----------
Confidence 9999999999999999999999999 999998 2356789999999999999999999999986650
Q ss_pred HhhhHHHHHHHHhhcCchhhhccccccccCCCCCcccceeeeeccCCCCCCCCCCCCcccchhHHHHHHHHHHhhcchhh
Q 011243 305 DQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNETA 384 (490)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (490)
T Consensus 362 -------------------------------------------------------------------------------- 361 (451)
T 3qvc_A 362 -------------------------------------------------------------------------------- 361 (451)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhhhhccCCCCCCCceeeeCCCCCCCCcEEEEECCEEEEeCcccceEeecccccceeeeeeEecccCCCCCCeee
Q 011243 385 DQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWI 464 (490)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~p~l~f~f~g~~~~i~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~i 464 (490)
....|.|.+||+ ...+|+|+|+|+|++++|||++|+.+..+.+...|++++.+.+. .++.||
T Consensus 362 --------------~~~~g~y~v~C~-~~~~P~itf~fgg~~i~lp~~~yi~~~~~~~~~~C~~~i~~~~~---~~~~~I 423 (451)
T 3qvc_A 362 --------------VPFLSLYVTTCG-NTKLPTLEYRSPNKVYTLEPKQYLEPLENIFSALCMLNIVPIDL---EKNTFV 423 (451)
T ss_dssp --------------CTTSSCEEEETT-CTTCCCEEEEETTEEEEECHHHHEEECTTTSTTEEEECEEECCC---STTEEE
T ss_pred --------------cCCCCeEEeeCC-cCcCCcEEEEECCEEEEEcHHHheeecccCCCCeEEEEEEeCCC---CCCCEE
Confidence 123577999999 77899999999999999999999998765456789999987542 157899
Q ss_pred ecHhhhcceeEEEeCCCCeEEEEEcC
Q 011243 465 LGDVFMGRYHTVFDYGNLSIGFAEAA 490 (490)
Q Consensus 465 LG~~fl~~~y~vfD~~~~~igfa~~~ 490 (490)
||++|||++|+|||++++|||||+++
T Consensus 424 LG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 424 LGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp ECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred ECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 99999999999999999999999986
No 13
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=1.4e-54 Score=446.62 Aligned_cols=305 Identities=28% Similarity=0.498 Sum_probs=268.0
Q ss_pred eeecCCCceEEE---eeccceeEeCCCCCcccccCCCCcccCCCCCceeeCCeEEEEEecCceEEEEEEEEEEEeCCeEe
Q 011243 72 ETMRTPVRRYNL---HGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFFSQDNVKVGDLVV 148 (490)
Q Consensus 72 v~IGTP~Q~~~v---TGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~dGs~~G~~~~Dtv~igg~~v 148 (490)
|+||||||++.| |||+++||++..|.....|..++.|+|++|+|++..++.|.+.|++|++.|.+++|+|+||+.++
T Consensus 24 i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~D~v~~g~~~v 103 (361)
T 1mpp_A 24 VSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGKRFFDPSSSSTFKETDYNLNITYGTGGANGIYFRDSITVGGATV 103 (361)
T ss_dssp EEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCSSCCBCGGGCTTCEEEEEEEEEECSSCEEEEEEEEEEEEETTEEE
T ss_pred EEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCCCCcCCCccCCceEecCCeEEEEECCceEEEEEEEEEEEECCEEE
Confidence 999999999999 99999999999995234799899999999999999999999999999999999999999999999
Q ss_pred eeeEEEEEEeecc-----ccccccccceEEecccCccccCC------CCchhhhhhhcCCCCCCeEEEEecCCCCCCCCc
Q 011243 149 KNQDFIEATKEAS-----ITFLAAKFDGILGLGFQEISIGK------AIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGG 217 (490)
Q Consensus 149 ~~~~FG~~~~~~~-----~~~~~~~~~GIlGLG~~~~s~~~------~~~~~~~L~~qG~I~~~~FSl~L~~~~~~~~~G 217 (490)
+++.||+++...+ ..+.....+||||||++..+... .++++++|++||+|.+++||+||++. ...|
T Consensus 104 ~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~---~~~G 180 (361)
T 1mpp_A 104 KQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTN---DGGG 180 (361)
T ss_dssp EEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCGGGSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCS---SSEE
T ss_pred eceEEEEEEeccCccccccccccCCCCCEEEeCCcccccccccccccCCCHHHHHHHcCCCCCcEEEEEecCC---CCCc
Confidence 9999999998755 33555678999999998776433 77899999999999999999999985 3479
Q ss_pred EEEECCCCCCCcccceEEEeccccc----eeEEEEceEEEcCeeccccCCCceEE-EcCCCCCcccCHHHHHHHHHHhcC
Q 011243 218 EIVFGGVDPDHYKGEHTYVPVTKKG----YWQFEMGDVLIDGETTGYCSTGCNAI-ADSGTSLLAGPTTIITQINHAIGA 292 (490)
Q Consensus 218 ~L~fGGiD~~~~~G~l~~~p~~~~~----~w~V~l~~i~vgg~~i~~~~~~~~ai-iDSGtt~~~lp~~~~~~l~~~~~~ 292 (490)
.|+|||+|++++.|++.|+|+.... +|.|.+++|.|+++.+. ......++ |||||++++||++++++|.+++++
T Consensus 181 ~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~-~~~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~ 259 (361)
T 1mpp_A 181 QVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVTGVKIDGSDAV-SFDGAQAFTIDTGTNFFIAPSSFAEKVVKAALP 259 (361)
T ss_dssp EEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEEEEEETTEEEE-EEEEEEEEEEETTCCSEEEEHHHHHHHHHHHCT
T ss_pred EEEEecCChhhcCCceEEEEcccCCCceeEEEEEEeEEEECCeeec-cCCCCEEEEECCCCCceeCCHHHHHHHHHHhCC
Confidence 9999999999999999999998765 99999999999998764 23457899 999999999999999999999976
Q ss_pred CcccchhhhHHHHhhhHHHHHHHHhhcCchhhhccccccccCCCCCcccceeeeeccCCCCCCCCCCCCcccchhHHHHH
Q 011243 293 SGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVI 372 (490)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (490)
.
T Consensus 260 ~------------------------------------------------------------------------------- 260 (361)
T 1mpp_A 260 D------------------------------------------------------------------------------- 260 (361)
T ss_dssp T-------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 4
Q ss_pred HHHHHhhcchhhHHHHHhhhhhccCCCCCCCceeeeCCCCCCC-CcEEEEE--C-----CEEEEeCcccceEeecccccc
Q 011243 373 WMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSM-PNVSFTI--G-----GKVFDLAPNEYVLEVGEGVAA 444 (490)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~-p~l~f~f--~-----g~~~~i~~~~y~~~~~~~~~~ 444 (490)
++...|.|.++|.....+ |+|+|+| + |++++|+|++|+++... +..
T Consensus 261 -------------------------~~~~~g~~~~~C~~~~~~~p~i~f~f~~g~~~~~g~~~~i~~~~y~~~~~~-~~~ 314 (361)
T 1mpp_A 261 -------------------------ATESQQGYTVPCSKYQDSKTTFSLVLQKSGSSSDTIDVSVPISKMLLPVDK-SGE 314 (361)
T ss_dssp -------------------------CEEETTEEEEEHHHHTTCCCEEEEEEECTTCSSCEEEEEEEGGGGEEECSS-SSC
T ss_pred -------------------------ccCCCCcEEEECCCcccCCCcEEEEEEcCCcCCCCeEEEECHHHhEEecCC-CCC
Confidence 012346788999877788 9999999 8 89999999999998643 345
Q ss_pred eeeeeeEecccCCCCCCeeeecHhhhcceeEEEeCCCCeEEEEEcC
Q 011243 445 QCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 490 (490)
Q Consensus 445 ~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfa~~~ 490 (490)
.|+++|.+. .++.||||++|||++|+|||++++|||||+++
T Consensus 315 ~C~~~i~~~-----~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 355 (361)
T 1mpp_A 315 TCMFIVLPD-----GGNQFIVGNLFLRFFVNVYDFGKNRIGFAPLA 355 (361)
T ss_dssp EEEESEEEE-----SSSCCEEEHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred eeEEEEEeC-----CCCCEEEChHHhccEEEEEECCCCEEEEEEcc
Confidence 899998854 34689999999999999999999999999975
No 14
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=2.7e-54 Score=439.71 Aligned_cols=298 Identities=28% Similarity=0.513 Sum_probs=265.8
Q ss_pred eeecCCCceEEE---eeccceeEeCCCCCccccc--CCCCcccCCCCCceeeCCeEEEEEecCceEEEEEEEEEEEeCCe
Q 011243 72 ETMRTPVRRYNL---HGSSNLWVPSAKCYFSVSC--YFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFFSQDNVKVGDL 146 (490)
Q Consensus 72 v~IGTP~Q~~~v---TGSs~~WV~s~~C~~~~~C--~~~~~y~p~~SsT~~~~~~~~~~~Y~dGs~~G~~~~Dtv~igg~ 146 (490)
|+|| ||++.| |||+++||++..|. ...| ..++.|+|++| |++..++.|.+.|++|++.|.+++|+|++|+.
T Consensus 23 i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~~~y~~~~S-T~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~ 98 (330)
T 1yg9_A 23 TKIG--NQNFLTVFDSTSCNVVVASQECV-GGACVCPNLQKYEKLKP-KYISDGNVQVKFFDTGSAVGRGIEDSLTISQL 98 (330)
T ss_dssp EEET--TEEEEEEEETTCCCEEEECTTCC-SGGGGSTTCCCCCCSSC-EEEEEEEEEEEETTTEEEEEEEEEEEEEETTE
T ss_pred EEEC--CEEEEEEEeCCCcceEEecCCCC-CccCcccccCccCCCCC-ceEECCCEEEEEECCceEEEEEEEEEEEECCE
Confidence 9999 899988 99999999999996 4679 88899999999 99999999999999999999999999999999
Q ss_pred EeeeeEEEEEEeeccccccccccceEEecccCccc-cCCCCchhhhhhhcCCCCCCeEEEEecCCCCCCCCcEEEECCCC
Q 011243 147 VVKNQDFIEATKEASITFLAAKFDGILGLGFQEIS-IGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVD 225 (490)
Q Consensus 147 ~v~~~~FG~~~~~~~~~~~~~~~~GIlGLG~~~~s-~~~~~~~~~~L~~qG~I~~~~FSl~L~~~~~~~~~G~L~fGGiD 225 (490)
+++++.||+++.. +..+.....+||||||++..+ ....++++++|++||+| +++||+||++..+....|.|+|||+|
T Consensus 99 ~~~~~~fg~~~~~-~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i-~~~FS~~l~~~~~~~~~G~l~fGg~d 176 (330)
T 1yg9_A 99 TTSQQDIVLADEL-SQEVCILSADVVVGIAAPGCPNALKGKTVLENFVEENLI-APVFSIHHARFQDGEHFGEIIFGGSD 176 (330)
T ss_dssp EEEEEEEEEEEEE-CTHHHHTTCSEEEECSCTTSCCTTSCCCHHHHHHHTTSS-CSEEEEEEEECTTSCEEEEEEETSCC
T ss_pred EEcCeEEEEEEEc-ccccccccCceEEEcCcchhccccCCCCHHHHHHhcCCC-CceEEEEEcCCCCCCCCCEEEECCcC
Confidence 9999999999987 433455677999999999877 56678899999999999 99999999986433348999999999
Q ss_pred CCCcccceEEEeccccceeEEEEceEEEcCeeccccCCCceEEEcCCCCCcccCHHHHHHHHHHhcCCcccchhhhHHHH
Q 011243 226 PDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVD 305 (490)
Q Consensus 226 ~~~~~G~l~~~p~~~~~~w~V~l~~i~vgg~~i~~~~~~~~aiiDSGtt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~ 305 (490)
+++|+|++.|+|+....+|.|.+++|.|+++.+. ..+..++|||||+++++|++++++|.+++++..
T Consensus 177 ~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~--~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~----------- 243 (330)
T 1yg9_A 177 WKYVDGEFTYVPLVGDDSWKFRLDGVKIGDTTVA--PAGTQAIIDTSKAIIVGPKAYVNPINEAIGCVV----------- 243 (330)
T ss_dssp GGGEEEEEEEEEBSCTTSCCEECSEEEETTEEEE--CTTCEEEECTTCSSEEEEHHHHHHHHHHHTCEE-----------
T ss_pred HHHccCceEEEECCCCCEEEEEeCeEEECCEEEc--CCCcEEEEecCCccccCCHHHHHHHHHHhCCcc-----------
Confidence 9999999999999988999999999999998764 467899999999999999999999999996650
Q ss_pred hhhHHHHHHHHhhcCchhhhccccccccCCCCCcccceeeeeccCCCCCCCCCCCCcccchhHHHHHHHHHHhhcchhhH
Q 011243 306 QYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNETAD 385 (490)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (490)
T Consensus 244 -------------------------------------------------------------------------------- 243 (330)
T 1yg9_A 244 -------------------------------------------------------------------------------- 243 (330)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhhhhccCCCCCCC--ce-eeeCCCCCCCCcEEEEECCEEEEeCcccceEeecccccceeeeeeEecccCCCCCCe
Q 011243 386 QILNYVNQLCDRLPSPNG--ES-AVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPL 462 (490)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~--~~-~~~c~~~~~~p~l~f~f~g~~~~i~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~ 462 (490)
...| .| .+||+....+|+|+|+|+|++++|++++|+.+. ...|++.|.+. +.++.
T Consensus 244 --------------~~~g~~~~~~~~C~~~~~~p~i~f~fgg~~~~l~~~~y~~~~----~~~C~~~i~~~----~~~~~ 301 (330)
T 1yg9_A 244 --------------EKTTTRRICKLDCSKIPSLPDVTFVINGRNFNISSQYYIQQN----GNLCYSGFQPC----GHSDH 301 (330)
T ss_dssp --------------EECSSCEEEEECGGGGGGSCCEEEEETTEEEEECHHHHEEEE----TTEEEESEEEE----TTCSS
T ss_pred --------------cCCCceEEEEEECCCccccCcEEEEECCEEEEECHHHhcccC----CCcEEEEEEeC----CCCCe
Confidence 1124 57 899997778999999999999999999999986 35899998864 24568
Q ss_pred eeecHhhhcceeEEEeCCCCeEEEEEcC
Q 011243 463 WILGDVFMGRYHTVFDYGNLSIGFAEAA 490 (490)
Q Consensus 463 ~iLG~~fl~~~y~vfD~~~~~igfa~~~ 490 (490)
||||++|||++|+|||++|+|||||+++
T Consensus 302 ~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 302 FFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp EEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEecHHHhhheEEEEECCCCEEEEEECC
Confidence 9999999999999999999999999985
No 15
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=3.2e-54 Score=455.59 Aligned_cols=301 Identities=34% Similarity=0.630 Sum_probs=268.5
Q ss_pred eeecCCCceEEE---eeccceeEeCCCCCcccccCCCCcccCCCCCceeeCCeEEEEEecCceEEEEEEEEEEEeCCeEe
Q 011243 72 ETMRTPVRRYNL---HGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFFSQDNVKVGDLVV 148 (490)
Q Consensus 72 v~IGTP~Q~~~v---TGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~dGs~~G~~~~Dtv~igg~~v 148 (490)
|+||||||++.| |||+++||++..|. ...|..++.|+|++|+|++..++.|.+.|++|++.|.+++|+|++|+.++
T Consensus 144 I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~-~~~C~~~~~ydps~SsT~~~~~~~~~i~YgdGs~~G~~~~Dtv~ig~~~v 222 (453)
T 2bju_A 144 AEVGDNQQPFTFILDTGSANLWVPSVKCT-TAGCLTKHLYDSSKSRTYEKDGTKVEMNYVSGTVSGFFSKDLVTVGNLSL 222 (453)
T ss_dssp EEETTTTEEEEEEEETTCCCEEEEBTTCC-STTGGGSCCBCGGGCTTCEEEEEEEEEECSSSEEEEEEEEEEEEETTEEE
T ss_pred EEECCCCeEEEEEEECCCcceEEeccCCC-ccccCCCCcCCCccCCceeECCcEEEEEcCCCCeEEEEEEEEEEEeCcEE
Confidence 999999999999 99999999999997 56899999999999999999999999999999999999999999999999
Q ss_pred eeeEEEEEEeec--cccccccccceEEecccCccccCCCCchhhhhhhcCCCCCCeEEEEecCCCCCCCCcEEEECCCCC
Q 011243 149 KNQDFIEATKEA--SITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDP 226 (490)
Q Consensus 149 ~~~~FG~~~~~~--~~~~~~~~~~GIlGLG~~~~s~~~~~~~~~~L~~qG~I~~~~FSl~L~~~~~~~~~G~L~fGGiD~ 226 (490)
+ +.||+++... +..+.....+||||||++..+....++++++|++||+|++++||+||++.+ ...|.|+|||+|+
T Consensus 223 ~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FS~~L~~~~--~~~G~l~fGg~D~ 299 (453)
T 2bju_A 223 P-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPIVVELKNQNKIENALFTFYLPVHD--KHTGFLTIGGIEE 299 (453)
T ss_dssp E-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGSTTCCCCHHHHHHHTTSSSSCEEEEECCBTT--TBCEEEEESSCCG
T ss_pred E-EEEEEEEEecccCccccccCCceeEeccCCcccccCCCcHHHHHHHCCCCCCCEEEEEeCCCC--CCCeEEEECCCCH
Confidence 9 9999999876 443445678999999999888777788999999999999999999999862 4589999999999
Q ss_pred CCcccceEEEeccccceeEEEEceEEEcCeeccccCCCceEEEcCCCCCcccCHHHHHHHHHHhcCCcccchhhhHHHHh
Q 011243 227 DHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQ 306 (490)
Q Consensus 227 ~~~~G~l~~~p~~~~~~w~V~l~~i~vgg~~i~~~~~~~~aiiDSGtt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~ 306 (490)
++|+|++.|+|+...++|.|.++ |.+++ .+ . .+..++|||||+++++|++++++|.+++++.
T Consensus 300 ~~y~G~l~~~pv~~~~~w~V~l~-I~Vgg-~~--~-~~~~aIiDSGTsl~~lP~~~~~~l~~~i~~~------------- 361 (453)
T 2bju_A 300 RFYEGPLTYEKLNHDLYWQITLD-AHVGN-IM--L-EKANCIVDSGTSAITVPTDFLNKMLQNLDVI------------- 361 (453)
T ss_dssp GGEEEEEEEEEEEEETTEEEEEE-EEETT-EE--E-EEEEEEECTTCCSEEECHHHHHHHTTTSSCE-------------
T ss_pred HHcCCceEEEecCCCceEEEEEE-EEECc-EE--e-ccccEEEcCCCCeEecCHHHHHHHHHHhCCc-------------
Confidence 99999999999998899999999 99999 33 2 5678999999999999999999998887554
Q ss_pred hhHHHHHHHHhhcCchhhhccccccccCCCCCcccceeeeeccCCCCCCCCCCCCcccchhHHHHHHHHHHhhcchhhHH
Q 011243 307 YGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNETADQ 386 (490)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (490)
T Consensus 362 -------------------------------------------------------------------------------- 361 (453)
T 2bju_A 362 -------------------------------------------------------------------------------- 361 (453)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhhhhccCCCCCCC-ceeeeCCCCCCCCcEEEEECCEEEEeCcccceEeecccccceeeeeeEecccCCCCCCeeee
Q 011243 387 ILNYVNQLCDRLPSPNG-ESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWIL 465 (490)
Q Consensus 387 ~~~~~~~~~~~~~~~~~-~~~~~c~~~~~~p~l~f~f~g~~~~i~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~iL 465 (490)
+...| .|.++|.. ..+|+|+|+|+|+.++|||++|+.+....+...|+++|.+.+. ..+.|||
T Consensus 362 ------------~~~~g~~~~v~C~~-~~~P~itf~fgg~~~~l~~~~yi~~~~~~g~~~C~~~~~~~~~---~~~~~IL 425 (453)
T 2bju_A 362 ------------KVPFLPFYVTLCNN-SKLPTFEFTSENGKYTLEPEYYLQHIEDVGPGLCMLNIIGLDF---PVPTFIL 425 (453)
T ss_dssp ------------ECTTSSCEEEETTC-TTCCCEEEECSSCEEEECHHHHEEECTTTSTTEEEECEEECCC---SSCEEEE
T ss_pred ------------ccCCCceEEEecCC-CCCCcEEEEECCEEEEECHHHhEeecccCCCceEEEEEEeCCC---CCCCEEE
Confidence 11245 68999987 6899999999999999999999998654345689999987542 2358999
Q ss_pred cHhhhcceeEEEeCCCCeEEEEEcC
Q 011243 466 GDVFMGRYHTVFDYGNLSIGFAEAA 490 (490)
Q Consensus 466 G~~fl~~~y~vfD~~~~~igfa~~~ 490 (490)
|++|||++|+|||++++|||||+++
T Consensus 426 Gd~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 426 GDPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp CHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred CHHHhhcEEEEEECCCCEEEEEEcc
Confidence 9999999999999999999999975
No 16
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=2.8e-53 Score=431.24 Aligned_cols=298 Identities=35% Similarity=0.639 Sum_probs=260.2
Q ss_pred eeecCCCceEEE---eeccceeEeCCCCCcccccCCCCcccCCCCCceeeCCeEEEEEecCce-EEEEEEEEEEEeCCeE
Q 011243 72 ETMRTPVRRYNL---HGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGA-ISGFFSQDNVKVGDLV 147 (490)
Q Consensus 72 v~IGTP~Q~~~v---TGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~dGs-~~G~~~~Dtv~igg~~ 147 (490)
|+||||||++.| |||+++||++..|..+ |..++.|+|++|+|++..++.|.+.|++|+ +.|.+++|+|++|+.+
T Consensus 21 i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c--~~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~ 98 (325)
T 2apr_A 21 VTIGTPGKKFNLDFDTGSSDLWIASTLCTNC--GSGQTKYDPNQSSTYQADGRTWSISYGDGSSASGILAKDNVNLGGLL 98 (325)
T ss_dssp EEETTTTEEEEEEEETTCCCCEEEBTTCSSC--CTTSCCBCGGGCTTCEEEEEEEEEECTTSCEEEEEEEEEEEEETTEE
T ss_pred EEECCCCeEEEEEEcCCCCCEEEccCCCchH--hcCCCCCCcccCCCeeeCCCEEEEEECCCCCEEEEEEEEEEEECCEE
Confidence 999999999999 9999999999999744 778889999999999999999999999998 8999999999999999
Q ss_pred eeeeEEEEEEeeccccccccccceEEecccCcccc-CCCCchhhhhhhcCCCCCCeEEEEecCCCCCCCCcEEEECCCCC
Q 011243 148 VKNQDFIEATKEASITFLAAKFDGILGLGFQEISI-GKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDP 226 (490)
Q Consensus 148 v~~~~FG~~~~~~~~~~~~~~~~GIlGLG~~~~s~-~~~~~~~~~L~~qG~I~~~~FSl~L~~~~~~~~~G~L~fGGiD~ 226 (490)
++++.||+++..... +.....+||||||++..+. ...++++++|++||+|++++||+||++.. ....|.|+|||+|+
T Consensus 99 v~~~~fg~~~~~~~~-f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~-~~~~G~l~fGg~d~ 176 (325)
T 2apr_A 99 IKGQTIELAKREAAS-FASGPNDGLLGLGFDTITTVRGVKTPMDNLISQGLISRPIFGVYLGKAK-NGGGGEYIFGGYDS 176 (325)
T ss_dssp EEEEEEEEEEEECHH-HHTSSCSEEEECSCGGGCSSTTCCCHHHHHHHTTSCSSSEEEEEECCGG-GTCCEEEEETCCCG
T ss_pred ECcEEEEEEeccCcc-cccCCCceEEEeCCcccccccCCCCHHHHHHhcCCCCCceEEEEecCCC-CCCCCEEEEccCCc
Confidence 999999999987554 4444589999999987764 35678999999999999999999997642 23489999999999
Q ss_pred CCcccceEEEecc-ccceeEEEEceEEEcCeeccccCCCceEEEcCCCCCcccCHHHHHHHHHHhcCCcccchhhhHHHH
Q 011243 227 DHYKGEHTYVPVT-KKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVD 305 (490)
Q Consensus 227 ~~~~G~l~~~p~~-~~~~w~V~l~~i~vgg~~i~~~~~~~~aiiDSGtt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~ 305 (490)
++|+|++.|+|+. ..++|.|.+++|++++ .+ ...+..++|||||++++||+++|+++.+++.+.
T Consensus 177 ~~~~g~l~~~p~~~~~~~~~v~l~~i~vg~-~~--~~~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~------------ 241 (325)
T 2apr_A 177 TKFKGSLTTVPIDNSRGWWGITVDRATVGT-ST--VASSFDGILDTGTTLLILPNNIAASVARAYGAS------------ 241 (325)
T ss_dssp GGBCSCCEEEECBCTTSSCEEEECEEEETT-EE--EECCEEEEECTTCSSEEEEHHHHHHHHHHHTCE------------
T ss_pred hhccCceEEEEccCCCCEEEEEEeEEEECC-Ee--cCCCceEEEecCCccEECCHHHHHHHHHHHhcc------------
Confidence 9999999999997 4689999999999999 33 356789999999999999999999999998554
Q ss_pred hhhHHHHHHHHhhcCchhhhccccccccCCCCCcccceeeeeccCCCCCCCCCCCCcccchhHHHHHHHHHHhhcchhhH
Q 011243 306 QYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNETAD 385 (490)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (490)
T Consensus 242 -------------------------------------------------------------------------------- 241 (325)
T 2apr_A 242 -------------------------------------------------------------------------------- 241 (325)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhhhhccCCCCCCCceeeeCCCCCCCCcEEEEECCEEEEeCcccceEeecccccceeeeeeEecccCCCCCCeeee
Q 011243 386 QILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWIL 465 (490)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~p~l~f~f~g~~~~i~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~iL 465 (490)
++. .+.|.++|+. ..+|+|+|+|+|.+++||+++|+.+.. ...|++.+...+ .+.|||
T Consensus 242 ------------~~~-~g~~~~~C~~-~~~p~i~f~f~g~~~~ip~~~~~~~~~---~~~C~~~i~~~~-----~~~~iL 299 (325)
T 2apr_A 242 ------------DNG-DGTYTISCDT-SAFKPLVFSINGASFQVSPDSLVFEEF---QGQCIAGFGYGN-----WGFAII 299 (325)
T ss_dssp ------------ECS-SSCEEECSCG-GGCCCEEEEETTEEEEECGGGGEEEEE---TTEEEESEEEES-----SSSEEE
T ss_pred ------------cCC-CCeEEEECCC-CCCCcEEEEECCEEEEECHHHEEEcCC---CCeEEEEEEcCC-----CCCEEE
Confidence 011 1568899984 348999999999999999999998754 468999887542 467999
Q ss_pred cHhhhcceeEEEeCCCCeEEEEEcC
Q 011243 466 GDVFMGRYHTVFDYGNLSIGFAEAA 490 (490)
Q Consensus 466 G~~fl~~~y~vfD~~~~~igfa~~~ 490 (490)
|++|||++|+|||++|+|||||+++
T Consensus 300 G~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 300 GDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp CHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CHHHhcceEEEEECCCCEEEEEecC
Confidence 9999999999999999999999985
No 17
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=3.1e-53 Score=431.60 Aligned_cols=300 Identities=28% Similarity=0.455 Sum_probs=260.0
Q ss_pred eeecCCCceEEE---eeccceeEeCCCCCcccccCCCCcccCCCCCceee-CCeEEEEEecCce-EEEEEEEEEEEeCCe
Q 011243 72 ETMRTPVRRYNL---HGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKR-NGTSAAIQYGTGA-ISGFFSQDNVKVGDL 146 (490)
Q Consensus 72 v~IGTP~Q~~~v---TGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~-~~~~~~~~Y~dGs-~~G~~~~Dtv~igg~ 146 (490)
|+||||||++.| |||+++||++..|. ...|..++.|+|++|+|++. .++.|.+.|++|+ +.|.+++|+|+||+.
T Consensus 21 i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~~~~~~~y~~~~SsT~~~~~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~ 99 (329)
T 3c9x_A 21 VSIGTPAQVLPLDFDTGSSDLWVFSSETP-KSSATGHAIYTPSKSSTSKKVSGASWSISYGDGSSSSGDVYTDKVTIGGF 99 (329)
T ss_dssp EEETTTTEEEEEEEETTCCCEEECBTTSC-HHHHTTSCCBCGGGCTTCEECTTCBEEEECTTSCEEEEEEEEEEEEETTE
T ss_pred EEECCCCeEEEEEEcCCCCCeEEecCCCC-ccccCCCCcCCcccCcCceEcCCCeEEEEeCCCCcEEEEEEEEEEEECCE
Confidence 999999999999 99999999999997 34567788999999999999 6899999999999 899999999999999
Q ss_pred EeeeeEEEEEEeeccccccccccceEEecccCcccc---CCCCchhhhhhhcCCCCCCeEEEEecCCCCCCCCcEEEECC
Q 011243 147 VVKNQDFIEATKEASITFLAAKFDGILGLGFQEISI---GKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGG 223 (490)
Q Consensus 147 ~v~~~~FG~~~~~~~~~~~~~~~~GIlGLG~~~~s~---~~~~~~~~~L~~qG~I~~~~FSl~L~~~~~~~~~G~L~fGG 223 (490)
+++++.||++....+........+||||||++..+. ...++++++|+++ |++++||+||++. ..|.|+|||
T Consensus 100 ~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~l~~~----~~G~l~fGg 173 (329)
T 3c9x_A 100 SVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWFSNAASS--LAEPLFTADLRHG----QNGSYNFGY 173 (329)
T ss_dssp EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHHTT--SSSSEEEEECCSS----SCEEEEESS
T ss_pred EEcceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCCCHHHHHHHh--cCCCEEEEEecCC----CCcEEEEeC
Confidence 999999999998755433345779999999987764 2467799999987 8999999999874 389999999
Q ss_pred CCCCCcccceEEEecc-ccceeEEEEceEEEcCeeccccCCCceEEEcCCCCCcccCHHHHHHHHHHhcCCcccchhhhH
Q 011243 224 VDPDHYKGEHTYVPVT-KKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKT 302 (490)
Q Consensus 224 iD~~~~~G~l~~~p~~-~~~~w~V~l~~i~vgg~~i~~~~~~~~aiiDSGtt~~~lp~~~~~~l~~~~~~~~~~~~~~~~ 302 (490)
+|+++|+|++.|+|+. ..++|.|.+++|.|+++.+. ..+..++|||||++++||++++++|.+++.+..
T Consensus 174 ~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~--~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~a~-------- 243 (329)
T 3c9x_A 174 IDTSVAKGPVAYTPVDNSQGFWEFTASGYSVGGGKLN--RNSIDGIADTGTTLLLLDDNVVDAYYANVQSAQ-------- 243 (329)
T ss_dssp CCGGGCSSCEEEEECBCTTSSCEEEECCEEETTCCCC--SCCEEEEECTTCCSEEECHHHHHHHHTTCTTCE--------
T ss_pred cChhhcccceEEEEccCCCceEEEEEeeEEECCEecc--CCCceEEEECCCCcEeCCHHHHHHHHHhCCCcE--------
Confidence 9999999999999997 57899999999999998764 567899999999999999999999999885440
Q ss_pred HHHhhhHHHHHHHHhhcCchhhhccccccccCCCCCcccceeeeeccCCCCCCCCCCCCcccchhHHHHHHHHHHhhcch
Q 011243 303 LVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNE 382 (490)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (490)
T Consensus 244 -------------------------------------------------------------------------------- 243 (329)
T 3c9x_A 244 -------------------------------------------------------------------------------- 243 (329)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHhhhhhccCCCCCCCceeeeCCCCCCCCcEEEEECCEEEEeCcccceEeecccccceeeeeeEecccCCCCCCe
Q 011243 383 TADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPL 462 (490)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~p~l~f~f~g~~~~i~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~ 462 (490)
+....+.|.++|. ..+|+|+|+|+|++++||+++|+.+..+.+...|++.+.+.+ ..+.
T Consensus 244 ---------------~~~~~~~~~~~C~--~~~P~i~f~f~g~~~~ip~~~~~~~~~~~~~~~C~~~i~~~~----~~~~ 302 (329)
T 3c9x_A 244 ---------------YDNQQEGVVFDCD--EDLPSFSFGVGSSTITIPGDLLNLTPLEEGSSTCFGGLQSSS----GIGI 302 (329)
T ss_dssp ---------------EETTTTEEEEETT--CCCCCEEEEETTEEEEECGGGGEEEESSTTCSEEEESEEECT----TTTS
T ss_pred ---------------EcCCCCEEEEECC--CCCCcEEEEECCEEEEECHHHeeeeccCCCCCeEEEEEEcCC----CCCc
Confidence 0112467889998 579999999999999999999998754334468999887532 3468
Q ss_pred eeecHhhhcceeEEEeCCCCeEEEEEc
Q 011243 463 WILGDVFMGRYHTVFDYGNLSIGFAEA 489 (490)
Q Consensus 463 ~iLG~~fl~~~y~vfD~~~~~igfa~~ 489 (490)
||||++|||++|+|||++|+|||||+.
T Consensus 303 ~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 303 NIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp EEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred EEEChHHhccEEEEEECCCCEEeEecC
Confidence 999999999999999999999999984
No 18
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=2.9e-53 Score=433.01 Aligned_cols=311 Identities=25% Similarity=0.439 Sum_probs=266.6
Q ss_pred cEEEeeeeecccccccccccccccCceeecCCCceEEE---eeccceeEeCCC--CCcccccCCCCcccCCCCCceeeCC
Q 011243 46 LVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVRRYNL---HGSSNLWVPSAK--CYFSVSCYFHSKYKSSHSSTYKRNG 120 (490)
Q Consensus 46 ~~~lPL~~~~~~~~~~~~~~l~~~~~v~IGTP~Q~~~v---TGSs~~WV~s~~--C~~~~~C~~~~~y~p~~SsT~~~~~ 120 (490)
.+.+||.......... |+||||||++.| |||+++||++.. |..+..|..++.|+|++|+|++..+
T Consensus 2 ~i~~~l~~~~~~Y~~~----------i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~~~~~y~~~~SsT~~~~~ 71 (339)
T 3fv3_A 2 SISLSLINEGPSYASK----------VSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKSSGTFTPSSSSSYKNLG 71 (339)
T ss_dssp CEEEEEEECSSSEEEE----------EEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTTTTCCBCGGGCTTCEEEE
T ss_pred ceeeEEEcCCCEEEEE----------EEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCCCCCcCCCccCcceeeCC
Confidence 4677777654322211 999999999999 999999999765 7655579989999999999999999
Q ss_pred eEEEEEecCce-EEEEEEEEEEEeCCeEeeeeEEEEEEeeccccccccccceEEecccCcccc----------CCCCchh
Q 011243 121 TSAAIQYGTGA-ISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISI----------GKAIPVW 189 (490)
Q Consensus 121 ~~~~~~Y~dGs-~~G~~~~Dtv~igg~~v~~~~FG~~~~~~~~~~~~~~~~GIlGLG~~~~s~----------~~~~~~~ 189 (490)
+.|.+.|++|+ +.|.+++|+|+||+.+++++.||+++.... .+||||||++..+. ...++++
T Consensus 72 ~~~~i~Yg~gs~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~-------~~GilGLg~~~~~~~~~~~~~~~~~~~~~~~ 144 (339)
T 3fv3_A 72 AAFTIRYGDGSTSQGTWGKDTVTINGVSITGQQIADVTQTSV-------DQGILGIGYTSNEAVYDTSGRQTTPNYDNVP 144 (339)
T ss_dssp EEEEEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEESS-------SSCEEECSCGGGCCCBCTTSCBCSCCCCCHH
T ss_pred ceEEEEECCCceEEEEEEEEEEEECCEEECceEEEEEEecCC-------CceeEEecCccccccccccccccCccCCcHH
Confidence 99999999995 999999999999999999999999987653 48999999987653 2355689
Q ss_pred hhhhhcCCCCCCeEEEEecCCCCCCCCcEEEECCCCCCCcccceEEEeccccceeEEEEceEEEcCeeccccCCCceEEE
Q 011243 190 YNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIA 269 (490)
Q Consensus 190 ~~L~~qG~I~~~~FSl~L~~~~~~~~~G~L~fGGiD~~~~~G~l~~~p~~~~~~w~V~l~~i~vgg~~i~~~~~~~~aii 269 (490)
++|++||+|++++||+||++.. ...|.|+|||+|+++|.|++.|+|+....+|.|.+++|.++++.+. ....++|
T Consensus 145 ~~L~~~g~i~~~~fsl~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~---~~~~~ii 219 (339)
T 3fv3_A 145 VTLKKQGKIRTNAYSLYLNSPS--AETGTIIFGGVDNAKYSGKLVAEQVTSSQALTISLASVNLKGSSFS---FGDGALL 219 (339)
T ss_dssp HHHHHTTSCSSSEEEEECCCTT--CSEEEEEETEEETTSBSSCCEEEEBCCSSSCEEEEEEEEESSCEEE---EEEEEEE
T ss_pred HHHHHCCCCCCceEEEEECCCC--CCCeEEEEeeechHHeecceEEEecccCccEEEEEEEEEECCEeec---CCccEEE
Confidence 9999999999999999998753 3589999999999999999999999998899999999999999875 3478999
Q ss_pred cCCCCCcccCHHHHHHHHHHhcCCcccchhhhHHHHhhhHHHHHHHHhhcCchhhhccccccccCCCCCcccceeeeecc
Q 011243 270 DSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDK 349 (490)
Q Consensus 270 DSGtt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (490)
||||++++||++++++|.+++++.- + +
T Consensus 220 DSGtt~~~lP~~~~~~i~~~~~~~~---------------------------------------~-------------~- 246 (339)
T 3fv3_A 220 DSGTTLTYFPSDFAAQLADKAGARL---------------------------------------V-------------Q- 246 (339)
T ss_dssp CTTBSSEEECHHHHHHHHHHHTCEE---------------------------------------E-------------E-
T ss_pred eCCCCCEecCHHHHHHHHHHcCCEE---------------------------------------c-------------c-
Confidence 9999999999999999999997650 0 0
Q ss_pred CCCCCCCCCCCCcccchhHHHHHHHHHHhhcchhhHHHHHhhhhhccCCCCCCCceeeeCCCCCCCCcEEEEEC-CEEEE
Q 011243 350 SSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIG-GKVFD 428 (490)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~p~l~f~f~-g~~~~ 428 (490)
.+...+.|.++|.. ..+|.|+|+|+ |++++
T Consensus 247 ------------------------------------------------~~~~~~~~~~~C~~-~~~p~i~f~f~~g~~~~ 277 (339)
T 3fv3_A 247 ------------------------------------------------VARDQYLYFIDCNT-DTSGTTVFNFGNGAKIT 277 (339)
T ss_dssp ------------------------------------------------EETTEEEEEECTTC-CCCSEEEEEETTSCEEE
T ss_pred ------------------------------------------------ccccCceEEEecCC-CCCCcEEEEECCCCEEE
Confidence 00124678999986 56999999995 89999
Q ss_pred eCcccceEeecccccceeeeeeEecccCCCCCCeeeecHhhhcceeEEEeCCCCeEEEEEcC
Q 011243 429 LAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 490 (490)
Q Consensus 429 i~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfa~~~ 490 (490)
||+++|+.+.. ...|++.|.+ .+.||||++|||++|++||++++|||||+++
T Consensus 278 v~~~~~~~~~~---~~~C~~~i~~-------~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~ 329 (339)
T 3fv3_A 278 VPNTEYVYQNG---DGTCLWGIQP-------SDDTILGDNFLRHAYLLYNLDANTISIAQVK 329 (339)
T ss_dssp EEGGGGEEECS---SSCEEESEEE-------CSSCEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred ECHHHheeeCC---CCeEEEEEEe-------CCcEEeChHHHhCEEEEEECCCCEEEEEecC
Confidence 99999998753 2579999985 2469999999999999999999999999985
No 19
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=4.7e-53 Score=430.27 Aligned_cols=299 Identities=28% Similarity=0.446 Sum_probs=257.9
Q ss_pred eeecCCCceEEE---eeccceeEeCCCCCcccccCCCCcccCCCCCceee-CCeEEEEEecCce-EEEEEEEEEEEeCCe
Q 011243 72 ETMRTPVRRYNL---HGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKR-NGTSAAIQYGTGA-ISGFFSQDNVKVGDL 146 (490)
Q Consensus 72 v~IGTP~Q~~~v---TGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~-~~~~~~~~Y~dGs-~~G~~~~Dtv~igg~ 146 (490)
|+||||||++.| |||+++||++..|. ...| .++.|+|++|+|++. .++.|.+.|++|+ +.|.+++|+|++|+.
T Consensus 21 i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~~-~~~~y~~~~SsT~~~~~~~~~~i~Yg~Gs~~~G~~~~D~v~~g~~ 98 (329)
T 1oew_A 21 VQIGTPAQTLNLDFDTGSSDLWVFSSETT-ASEV-XQTIYTPSKSTTAKLLSGATWSISYGDGSSSSGDVYTDTVSVGGL 98 (329)
T ss_dssp EEETTTTEEEEEEEETTCCCEEECBTTSC-GGGC--CCCBCGGGCTTCEEEEEEEEEEECTTSCEEEEEEEEEEEEETTE
T ss_pred EEECCCCeEEEEEECCCCCCeEEecCCCC-cccc-ccCccCCccCccceecCCCeEEEEeCCCCcEEEEEEEEEEEECCE
Confidence 999999999999 99999999999997 3356 788999999999998 6889999999999 899999999999999
Q ss_pred EeeeeEEEEEEeeccccccccccceEEecccCcccc---CCCCchhhhhhhcCCCCCCeEEEEecCCCCCCCCcEEEECC
Q 011243 147 VVKNQDFIEATKEASITFLAAKFDGILGLGFQEISI---GKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGG 223 (490)
Q Consensus 147 ~v~~~~FG~~~~~~~~~~~~~~~~GIlGLG~~~~s~---~~~~~~~~~L~~qG~I~~~~FSl~L~~~~~~~~~G~L~fGG 223 (490)
+++++.||+++...+..+.....+||||||++..+. ...++++++|+++ |.+++||+||++. ..|.|+|||
T Consensus 99 ~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~L~~~----~~G~l~fGg 172 (329)
T 1oew_A 99 TVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAKAS--LDSPVFTADLGYH----APGTYNFGF 172 (329)
T ss_dssp EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHTTT--SSSSEEEEECCSS----SCEEEEESC
T ss_pred EEeeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCHHHHHHHh--ccCcEEEEEccCC----CCeEEEEec
Confidence 999999999998765433335679999999987764 2467799999987 8999999999874 389999999
Q ss_pred CCCCCcccceEEEecc-ccceeEEEEceEEEcCeeccccCCCceEEEcCCCCCcccCHHHHHHHHHHhcCCcccchhhhH
Q 011243 224 VDPDHYKGEHTYVPVT-KKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKT 302 (490)
Q Consensus 224 iD~~~~~G~l~~~p~~-~~~~w~V~l~~i~vgg~~i~~~~~~~~aiiDSGtt~~~lp~~~~~~l~~~~~~~~~~~~~~~~ 302 (490)
+|+++|+|++.|+|+. ..++|.|.+++|.|+++.+. .....++|||||++++||++++++|.+++.+..
T Consensus 173 ~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~--~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~a~-------- 242 (329)
T 1oew_A 173 IDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFK--STSIDGIADTGTTLLYLPATVVSAYWAQVSGAK-------- 242 (329)
T ss_dssp CCTTSSSSCCEEEECBCTTSSCEEEEEEEEETTSCCE--EEEEEEEECTTCCSEEECHHHHHHHHTTSTTCE--------
T ss_pred cChHhcccceEEEEccCCCceEEEEEeeEEECCeecc--CCCceEEEeCCCCCEECCHHHHHHHHHhCCCcE--------
Confidence 9999999999999997 57899999999999998764 356789999999999999999999999885440
Q ss_pred HHHhhhHHHHHHHHhhcCchhhhccccccccCCCCCcccceeeeeccCCCCCCCCCCCCcccchhHHHHHHHHHHhhcch
Q 011243 303 LVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNE 382 (490)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (490)
T Consensus 243 -------------------------------------------------------------------------------- 242 (329)
T 1oew_A 243 -------------------------------------------------------------------------------- 242 (329)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHhhhhhccCCCCCCCceeeeCCCCCCCCcEEEEECCEEEEeCcccceEeecccccceeeeeeEecccCCCCCCe
Q 011243 383 TADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPL 462 (490)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~p~l~f~f~g~~~~i~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~ 462 (490)
+....+.|.++|. ..+|+|+|+|+|++++||+++|+.+..+.+...|++.+.+.+ ..+.
T Consensus 243 ---------------~~~~~g~~~~~C~--~~~P~i~f~fgg~~~~ip~~~~~~~~~~~~~~~C~~~i~~~~----~~~~ 301 (329)
T 1oew_A 243 ---------------SSSSVGGYVFPCS--ATLPSFTFGVGSARIVIPGDYIDFGPISTGSSSCFGGIQSSA----GIGI 301 (329)
T ss_dssp ---------------EETTTTEEEEETT--CCCCCEEEEETTEEEEECHHHHEEEESSTTCSEEEESEEEST----TTSS
T ss_pred ---------------EcCCCCEEEEECC--CCCCcEEEEECCEEEEECHHHeeeeecCCCCCeEEEEEEeCC----CCCc
Confidence 0113467889998 479999999999999999999998754334568999887542 3568
Q ss_pred eeecHhhhcceeEEEeC-CCCeEEEEEc
Q 011243 463 WILGDVFMGRYHTVFDY-GNLSIGFAEA 489 (490)
Q Consensus 463 ~iLG~~fl~~~y~vfD~-~~~~igfa~~ 489 (490)
||||++|||++|+|||+ +|+|||||+.
T Consensus 302 ~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 302 NIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp EEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred eEEChHHhcCEEEEEECCCCceEEEecC
Confidence 99999999999999999 9999999984
No 20
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=3.7e-52 Score=425.63 Aligned_cols=296 Identities=26% Similarity=0.434 Sum_probs=255.7
Q ss_pred eeecCCCceEEE---eeccceeEeCC--CCCc------ccccCCCCcccCCCCCceeeCCeEEEEEecCce-EEEEEEEE
Q 011243 72 ETMRTPVRRYNL---HGSSNLWVPSA--KCYF------SVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGA-ISGFFSQD 139 (490)
Q Consensus 72 v~IGTP~Q~~~v---TGSs~~WV~s~--~C~~------~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~dGs-~~G~~~~D 139 (490)
|+||||||++.| |||+++||++. .|.. ...|..++.|+|++|+|++..++.|.+.|++|+ +.|.+++|
T Consensus 18 i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~~G~~~~D 97 (342)
T 2qzx_A 18 ITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQNLNTRFDIKYGDGSYAKGKLYKD 97 (342)
T ss_dssp EEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEEEEEEEEEECTTSCEEEEEEEEE
T ss_pred EEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCcccCCCcEEEEeCCCCeEEEEEEEE
Confidence 999999999999 99999999966 5752 246888899999999999999999999999998 79999999
Q ss_pred EEEeCCeEeeeeEEEEEEeeccccccccccceEEecccCccccC--CCCchhhhhhhcCCCCCCeEEEEecCCCCCCCCc
Q 011243 140 NVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIG--KAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGG 217 (490)
Q Consensus 140 tv~igg~~v~~~~FG~~~~~~~~~~~~~~~~GIlGLG~~~~s~~--~~~~~~~~L~~qG~I~~~~FSl~L~~~~~~~~~G 217 (490)
+|++|+.+++++.||+++... ..+||||||++..+.. ...+++++|++||+|++++||+||++. ....|
T Consensus 98 ~v~~g~~~v~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~--~~~~G 168 (342)
T 2qzx_A 98 TVGIGGVSVRDQLFANVWSTS-------ARKGILGIGFQSGEATEFDYDNLPISLRNQGIIGKAAYSLYLNSA--EASTG 168 (342)
T ss_dssp EEEETTEEEEEEEEEEEEEEC-------SSSCEEECSCGGGCSSSSCCCCHHHHHHHTTSSSSSEEEEECCCT--TCSEE
T ss_pred EEEECCEEecceEEEEEEecC-------CCcCEEEEccccccCCCccCccHHHHHHHCCCcCccEEEEEeCCC--CCCCe
Confidence 999999999999999998753 3589999999876532 355789999999999999999999875 23589
Q ss_pred EEEECCCCCCCcccceEEEeccccceeEEEEceEEEcCeeccccCCCceEEEcCCCCCcccCHHHHHHHHHHhcCCcccc
Q 011243 218 EIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVIS 297 (490)
Q Consensus 218 ~L~fGGiD~~~~~G~l~~~p~~~~~~w~V~l~~i~vgg~~i~~~~~~~~aiiDSGtt~~~lp~~~~~~l~~~~~~~~~~~ 297 (490)
.|+|||+|+++|+|++.|+|+....+|.|.+++|.++++.+. .+..++|||||++++||++++++|.+++++..
T Consensus 169 ~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~---~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~--- 242 (342)
T 2qzx_A 169 QIIFGGIDKAKYSGSLVDLPITSEKKLTVGLRSVNVRGRNVD---ANTNVLLDSGTTISYFTRSIVRNILYAIGAQM--- 242 (342)
T ss_dssp EEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEE---EEEEEEECTTCSSEEECHHHHHHHHHHHTCEE---
T ss_pred EEEECccchhhEecceEEEeccCCceEEEEEeEEEECCEecC---CCcCEEEeCCCCCEEcCHHHHHHHHHHhCCee---
Confidence 999999999999999999999988899999999999998875 34689999999999999999999999997650
Q ss_pred hhhhHHHHhhhHHHHHHHHhhcCchhhhccccccccCCCCCcccceeeeeccCCCCCCCCCCCCcccchhHHHHHHHHHH
Q 011243 298 QECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNK 377 (490)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (490)
.++
T Consensus 243 ----------------------------------~~~------------------------------------------- 245 (342)
T 2qzx_A 243 ----------------------------------KFD------------------------------------------- 245 (342)
T ss_dssp ----------------------------------EEC-------------------------------------------
T ss_pred ----------------------------------eec-------------------------------------------
Confidence 000
Q ss_pred hhcchhhHHHHHhhhhhccCCCCCCCceeeeCCCCCCCCcEEEEE-CCEEEEeCcccceEeec---ccccceeeeeeEec
Q 011243 378 LRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTI-GGKVFDLAPNEYVLEVG---EGVAAQCISGFTAF 453 (490)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~p~l~f~f-~g~~~~i~~~~y~~~~~---~~~~~~C~~~~~~~ 453 (490)
+...+.|.++|+ .+|.|+|+| +|++++||+++|+.+.. ......|++.+.+.
T Consensus 246 ---------------------~~~~~~~~~~C~---~~p~i~f~f~~g~~~~i~~~~~~~~~~~~~~~~~~~C~~~i~~~ 301 (342)
T 2qzx_A 246 ---------------------SAGNKVYVADCK---TSGTIDFQFGNNLKISVPVSEFLFQTYYTSGKPFPKCEVRIRES 301 (342)
T ss_dssp ---------------------TTSCEEEEECTT---CCCEEEEEETTTEEEEEEGGGGEECCBCTTSCBCSSEEESEEEC
T ss_pred ---------------------cCCCcEEEEECC---CCCcEEEEECCCcEEEEcHHHhcccccccCCCCCCccEEEEecC
Confidence 012237889997 489999999 68999999999998753 12345799988743
Q ss_pred ccCCCCCCeeeecHhhhcceeEEEeCCCCeEEEEEcC
Q 011243 454 DVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 490 (490)
Q Consensus 454 ~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfa~~~ 490 (490)
+.||||++|||++|++||++++|||||+++
T Consensus 302 -------~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 331 (342)
T 2qzx_A 302 -------EDNILGDNFLRSAYVVYNLDDKKISMAPVK 331 (342)
T ss_dssp -------SSCEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred -------CCcEeChHhhhcEEEEEECCCCEEEEEeeC
Confidence 359999999999999999999999999975
No 21
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=3.2e-52 Score=424.86 Aligned_cols=291 Identities=27% Similarity=0.458 Sum_probs=254.8
Q ss_pred eeecCCCceEEE---eeccceeEeCC--CCCcc------cccCCCCcccCCCCCceeeCCeEEEEEecCce-EEEEEEEE
Q 011243 72 ETMRTPVRRYNL---HGSSNLWVPSA--KCYFS------VSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGA-ISGFFSQD 139 (490)
Q Consensus 72 v~IGTP~Q~~~v---TGSs~~WV~s~--~C~~~------~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~dGs-~~G~~~~D 139 (490)
|+||||||++.| |||+++||++. .|..+ ..|..++.|+|++|+|++..++.|.+.|++|+ +.|.+++|
T Consensus 18 i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~~G~~~~D 97 (334)
T 1j71_A 18 IVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNLNQDFSIEYGDLTSSQGSFYKD 97 (334)
T ss_dssp EEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEEEEEEEEEEBTTSCEEEEEEEEE
T ss_pred EEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCcccCCCceEEEECCCCEEEEEEEEE
Confidence 999999999999 99999999976 67532 36888899999999999999999999999998 79999999
Q ss_pred EEEeCCeEeeeeEEEEEEeeccccccccccceEEecccCcccc--CCCCchhhhhhhcCCCCCCeEEEEecCCCCCCCCc
Q 011243 140 NVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISI--GKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGG 217 (490)
Q Consensus 140 tv~igg~~v~~~~FG~~~~~~~~~~~~~~~~GIlGLG~~~~s~--~~~~~~~~~L~~qG~I~~~~FSl~L~~~~~~~~~G 217 (490)
+|++|+.+++++.||++.... ..+||||||++..+. ....+++++|++||+|++++||+||++. ....|
T Consensus 98 ~v~~g~~~~~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~--~~~~G 168 (334)
T 1j71_A 98 TVGFGGISIKNQQFADVTTTS-------VDQGIMGIGFTADEAGYNLYDNVPVTLKKQGIINKNAYSLYLNSE--DASTG 168 (334)
T ss_dssp EEEETTEEEEEEEEEEEEEES-------SSSCEEECSCGGGSSTTCCCCCHHHHHHHTTSCSSSEEEEECCCT--TCSEE
T ss_pred EEEECCEEEccEEEEEEEecC-------CCccEEEEcCCcccCccccCCcHHHHHHHCCCCCccEEEEEeCCC--CCCCe
Confidence 999999999999999998753 458999999987654 2456789999999999999999999875 23589
Q ss_pred EEEECCCCCCCcccceEEEeccccceeEEEEceEEEcCeeccccCCCceEEEcCCCCCcccCHHHHHHHHHHhcCCcccc
Q 011243 218 EIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVIS 297 (490)
Q Consensus 218 ~L~fGGiD~~~~~G~l~~~p~~~~~~w~V~l~~i~vgg~~i~~~~~~~~aiiDSGtt~~~lp~~~~~~l~~~~~~~~~~~ 297 (490)
.|+|||+|+++|+|++.|+|+....+|.|.+++|.++++.+. .+..++|||||++++||++++++|.+++++..
T Consensus 169 ~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~---~~~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~--- 242 (334)
T 1j71_A 169 KIIFGGVDNAKYTGTLTALPVTSSVELRVHLGSINFDGTSVS---TNADVVLDSGTTITYFSQSTADKFARIVGATW--- 242 (334)
T ss_dssp EEEETEEETTSEEEEEEEEECCCSSSCEEEEEEEEETTEEEE---EEEEEEECTTCSSEEECHHHHHHHHHHHTCEE---
T ss_pred EEEEeeechHHccCceEEEEccCCCeEEEEEeEEEECCEecc---CCccEEEeCCCCcEecCHHHHHHHHHHcCCcc---
Confidence 999999999999999999999988899999999999998875 34689999999999999999999999997660
Q ss_pred hhhhHHHHhhhHHHHHHHHhhcCchhhhccccccccCCCCCcccceeeeeccCCCCCCCCCCCCcccchhHHHHHHHHHH
Q 011243 298 QECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNK 377 (490)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (490)
T Consensus 243 -------------------------------------------------------------------------------- 242 (334)
T 1j71_A 243 -------------------------------------------------------------------------------- 242 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhcchhhHHHHHhhhhhccCCCCCCCcee-eeCCCCCCCCcEEEEE-CCEEEEeCcccceEeecccccceeeeeeEeccc
Q 011243 378 LRRNETADQILNYVNQLCDRLPSPNGESA-VDCDNLSSMPNVSFTI-GGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDV 455 (490)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~c~~~~~~p~l~f~f-~g~~~~i~~~~y~~~~~~~~~~~C~~~~~~~~~ 455 (490)
+...+.|. ++|+ .+|.++|+| +|++++||+++|+++..++ ..|++.+...
T Consensus 243 ---------------------~~~~~~~~~~~C~---~~p~i~f~f~~g~~~~i~~~~y~~~~~~~--~~C~~~i~~~-- 294 (334)
T 1j71_A 243 ---------------------DSRNEIYRLPSCD---LSGDAVFNFDQGVKITVPLSELILKDSDS--SICYFGISRN-- 294 (334)
T ss_dssp ---------------------ETTTTEEECSSSC---CCSEEEEEESTTCEEEEEGGGGEEECSSS--SCEEESEEEC--
T ss_pred ---------------------cCCCceEEEEcCC---CCCceEEEEcCCcEEEECHHHheeecCCC--CeeEEEEeEC--
Confidence 01234677 8997 489999999 6899999999999985432 3599988742
Q ss_pred CCCCCCeeeecHhhhcceeEEEeCCCCeEEEEEcC
Q 011243 456 APPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 490 (490)
Q Consensus 456 ~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfa~~~ 490 (490)
+.||||++|||++|++||++++|||||+++
T Consensus 295 -----~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (334)
T 1j71_A 295 -----DANILGDNFLRRAYIVYDLDDKTISLAQVK 324 (334)
T ss_dssp -----TTCEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred -----CCcEEChHhhccEEEEEECCCCEEEEEecC
Confidence 359999999999999999999999999975
No 22
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=9.8e-52 Score=419.86 Aligned_cols=298 Identities=29% Similarity=0.423 Sum_probs=258.1
Q ss_pred eeecCCCceEEE---eeccceeEeCCCCCcccccCCCCcccCCCCCceeeCCeEEEEEecCce-EEEEEEEEEEEeCCeE
Q 011243 72 ETMRTPVRRYNL---HGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGA-ISGFFSQDNVKVGDLV 147 (490)
Q Consensus 72 v~IGTP~Q~~~v---TGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~dGs-~~G~~~~Dtv~igg~~ 147 (490)
|+|| ||++.| |||+++||++..|. ...|..++.|+|++|+ ++..++.|.+.|++|+ +.|.+++|+|++|+.+
T Consensus 20 i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~ 95 (325)
T 1ibq_A 20 VTVG--KSTLHLDFDTGSADLWVFSDELP-SSEQTGHDLYTPSSSA-TKLSGYSWDISYGDGSSASGDVYRDTVTVGGVT 95 (325)
T ss_dssp EEEB--TEEEEEEEETTCCCEEEECTTSC-HHHHTTSCCCBCCSSC-EECTTCBEEEECSSSCEEEEEEEEEEEEETTEE
T ss_pred EEEC--CEEEEEEEeCCCccceEeeCCCC-ccccCCCCCCCchhcC-CccCCCEEEEEeCCCCEEEEEEEEeEEEECCEE
Confidence 9999 899988 99999999999997 4457788899999999 7768999999999999 8999999999999999
Q ss_pred eeeeEEEEEEeeccccccccccceEEecccCcccc---CCCCchhhhhhhcCCCCCCeEEEEecCCCCCCCCcEEEECCC
Q 011243 148 VKNQDFIEATKEASITFLAAKFDGILGLGFQEISI---GKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGV 224 (490)
Q Consensus 148 v~~~~FG~~~~~~~~~~~~~~~~GIlGLG~~~~s~---~~~~~~~~~L~~qG~I~~~~FSl~L~~~~~~~~~G~L~fGGi 224 (490)
++++.||+++...+..+.....+||||||++..+. ...++++++|+++ |.+++||+||++. ..|.|+|||+
T Consensus 96 v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~--i~~~~FS~~l~~~----~~G~l~fGg~ 169 (325)
T 1ibq_A 96 TNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFFDTVKSQ--LDSPLFAVQLKHD----APGVYDFGYI 169 (325)
T ss_dssp EEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG--SSSSEEEEEEETT----EEEEEEESSC
T ss_pred EcceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCCHHHHHHHh--cCCcEEEEEecCC----CCceEEECCc
Confidence 99999999998765434345779999999987764 2567899999987 8999999999874 3899999999
Q ss_pred CCCCcccceEEEecc-ccceeEEEEceEEEcCeeccccCCCceEEEcCCCCCcccCHHHHHHHHHHhcCCcccchhhhHH
Q 011243 225 DPDHYKGEHTYVPVT-KKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTL 303 (490)
Q Consensus 225 D~~~~~G~l~~~p~~-~~~~w~V~l~~i~vgg~~i~~~~~~~~aiiDSGtt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~ 303 (490)
|+++|+|++.|+|+. ..++|.|.+++|.++++.+. ..+..++|||||++++||++++++|.+++.+..
T Consensus 170 d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~~--~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~a~--------- 238 (325)
T 1ibq_A 170 DDSKYTGSITYTDADSSQGYWGFSTDGYSIGDGSSS--SSGFSAIADTGTTLILLDDEIVSAYYEQVSGAQ--------- 238 (325)
T ss_dssp CGGGBSSCCEEEECBCTTSSCEEEECEEEETTSCCB--SCCEEEEECTTCCSEEECHHHHHHHHTTSTTCB---------
T ss_pred ChhhccCceEEEEcCCCCceEEEEECcEEECCeecc--CCCceEEEeCCCCcEeCCHHHHHHHHHhCCCce---------
Confidence 999999999999997 57899999999999998764 567899999999999999999999999884430
Q ss_pred HHhhhHHHHHHHHhhcCchhhhccccccccCCCCCcccceeeeeccCCCCCCCCCCCCcccchhHHHHHHHHHHhhcchh
Q 011243 304 VDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNET 383 (490)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (490)
T Consensus 239 -------------------------------------------------------------------------------- 238 (325)
T 1ibq_A 239 -------------------------------------------------------------------------------- 238 (325)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHhhhhhccCCCCCCCceeeeCCCCCCCCcEEEEECCEEEEeCcccceEeecccccceeeeeeEecccCCCCCCee
Q 011243 384 ADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLW 463 (490)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~p~l~f~f~g~~~~i~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ 463 (490)
.....+.|.++|. ..+|+|+|+|+|++++||+++|+.+..+.+...|++.+.+.+ ..+.|
T Consensus 239 --------------~~~~~g~~~~~C~--~~~P~i~f~fgg~~~~i~~~~~~~~~~~~~~~~C~~~i~~~~----~~~~~ 298 (325)
T 1ibq_A 239 --------------ESYEAGGYVFSCS--TDLPDFTVVIGDYKAVVPGKYINYAPVSTGSSTCYGGIQSNS----GLGLS 298 (325)
T ss_dssp --------------CCSSSSSCEEETT--CCCCCEEEEETTEEEEECHHHHEEEESSTTCSEEEESEEECT----TTCSE
T ss_pred --------------EcCcCCeEEEEcC--CCCCcEEEEECCEEEEECHHHhcccccCCCCCeEEEEEEcCC----CCCce
Confidence 0123467889998 579999999999999999999998754333468999887532 34689
Q ss_pred eecHhhhcceeEEEeCCCCeEEEEEcC
Q 011243 464 ILGDVFMGRYHTVFDYGNLSIGFAEAA 490 (490)
Q Consensus 464 iLG~~fl~~~y~vfD~~~~~igfa~~~ 490 (490)
|||++|||++|+|||++|+|||||++|
T Consensus 299 iLG~~fl~~~y~vfD~~~~~igfA~~~ 325 (325)
T 1ibq_A 299 ILGDVFLKSQYVVFNSEGPKLGFAAQA 325 (325)
T ss_dssp EECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred EEChHHhcCEEEEEECCCCEEEeeeCC
Confidence 999999999999999999999999986
No 23
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=4.1e-52 Score=424.86 Aligned_cols=297 Identities=27% Similarity=0.437 Sum_probs=254.6
Q ss_pred eeecCCCceEEE---eeccceeEeCCC--CC------cccccCCCCcccCCCCCceeeCCeEEEEEecCce-EEEEEEEE
Q 011243 72 ETMRTPVRRYNL---HGSSNLWVPSAK--CY------FSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGA-ISGFFSQD 139 (490)
Q Consensus 72 v~IGTP~Q~~~v---TGSs~~WV~s~~--C~------~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~dGs-~~G~~~~D 139 (490)
|+||||||++.| |||+++||++++ |. ....|..++.|+|++|+|++..++.|.+.|++|+ +.|.+++|
T Consensus 18 i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~~G~~~~D 97 (342)
T 3pvk_A 18 ITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSASQDLNTPFKIGYGDGSSSQGTLYKD 97 (342)
T ss_dssp EEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGTTCCBCGGGCTTCEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred EEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCCCCCcCCCccCcceeecCCeEEEEecCCCeEEEEEEEE
Confidence 999999999999 999999999765 73 2357988999999999999999999999999998 89999999
Q ss_pred EEEeCCeEeeeeEEEEEEeeccccccccccceEEecccCccccC-CCCchhhhhhhcCCCCCCeEEEEecCCCCCCCCcE
Q 011243 140 NVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIG-KAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGE 218 (490)
Q Consensus 140 tv~igg~~v~~~~FG~~~~~~~~~~~~~~~~GIlGLG~~~~s~~-~~~~~~~~L~~qG~I~~~~FSl~L~~~~~~~~~G~ 218 (490)
+|+||+.+++++.||+++... ..+||||||++..+.. ..++++++|++||+|++++||+||++.+ ...|.
T Consensus 98 ~v~ig~~~v~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~L~~qg~i~~~~fs~~l~~~~--~~~G~ 168 (342)
T 3pvk_A 98 TVGFGGVSIKNQVLADVDSTS-------IDQGILGVGYKTNEAGGSYDNVPVTLKKQGVIAKNAYSLYLNSPD--AATGQ 168 (342)
T ss_dssp EEEETTEEEEEEEEEEEEEES-------SSSCEEECSCGGGCSSCSSCCHHHHHHHTTSSSSSEEEEECCCTT--CSEEE
T ss_pred EEEECCEEecceEEEEEEccC-------CCccEEEecCccccccccCCcHHHHHHhcCCCCCceEEEEeCCCC--CCCcE
Confidence 999999999999999998764 3589999999876543 3567899999999999999999998753 34799
Q ss_pred EEECCCCCCCcccceEEEeccccceeEEEEceEEEcCeeccccCCCceEEEcCCCCCcccCHHHHHHHHHHhcCCcccch
Q 011243 219 IVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQ 298 (490)
Q Consensus 219 L~fGGiD~~~~~G~l~~~p~~~~~~w~V~l~~i~vgg~~i~~~~~~~~aiiDSGtt~~~lp~~~~~~l~~~~~~~~~~~~ 298 (490)
|+|||+|+++|.|++.|+|+....+|.|.+++|.++++.+.. .+..++|||||++++||++++++|.+++++...
T Consensus 169 l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~--~~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~--- 243 (342)
T 3pvk_A 169 IIFGGVDNAKYSGSLIALPVTSDRELRISLGSVEVSGKTINT--DNVDVLLDSGTTITYLQQDLADQIIKAFNGKLT--- 243 (342)
T ss_dssp EEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEEE--EEEEEEECTTCSSEEECHHHHHHHHHHTTCEEE---
T ss_pred EEECccCccceeeeeEEeecCccceEEEEEeEEEECCEEecC--CCceEEEeCCCCCeecCHHHHHHHHHHcCCeec---
Confidence 999999999999999999999888999999999999998752 347899999999999999999999999976600
Q ss_pred hhhHHHHhhhHHHHHHHHhhcCchhhhccccccccCCCCCcccceeeeeccCCCCCCCCCCCCcccchhHHHHHHHHHHh
Q 011243 299 ECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKL 378 (490)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (490)
..
T Consensus 244 -------------------------------------------------~~----------------------------- 245 (342)
T 3pvk_A 244 -------------------------------------------------QD----------------------------- 245 (342)
T ss_dssp -------------------------------------------------EC-----------------------------
T ss_pred -------------------------------------------------cc-----------------------------
Confidence 00
Q ss_pred hcchhhHHHHHhhhhhccCCCCCCCceeeeCCCCCCCCcEEEEEC-CEEEEeCcccceEeeccc---ccceeeeeeEecc
Q 011243 379 RRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIG-GKVFDLAPNEYVLEVGEG---VAAQCISGFTAFD 454 (490)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~p~l~f~f~-g~~~~i~~~~y~~~~~~~---~~~~C~~~~~~~~ 454 (490)
....+.|.++|+ ..|+|+|+|+ |.+++||+++|+.+.... ....|++.+.+
T Consensus 246 --------------------~~~~~~~~~~C~---~~p~i~f~f~~g~~~~vp~~~~~~~~~~~~g~~~~~C~~~i~~-- 300 (342)
T 3pvk_A 246 --------------------SNGNSFYEVDCN---LSGDVVFNFSKNAKISVPASEFAASLQGDDGQPYDKCQLLFDV-- 300 (342)
T ss_dssp --------------------TTSCEEEEECSC---CCSEEEEEESTTCEEEEEGGGGEEC----------CEEESEEE--
T ss_pred --------------------CCCceEEEEecC---CCCceEEEECCCCEEEEcHHHheeeccccCCCcCCeeEEEEee--
Confidence 011235899998 4599999998 799999999999974321 13679999874
Q ss_pred cCCCCCCeeeecHhhhcceeEEEeCCCCeEEEEEcC
Q 011243 455 VAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 490 (490)
Q Consensus 455 ~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfa~~~ 490 (490)
.+.||||++|||++|++||++++|||||+++
T Consensus 301 -----~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~ 331 (342)
T 3pvk_A 301 -----NDANILGDNFLRSAYIVYDLDDNEISLAQVK 331 (342)
T ss_dssp -----CTTCEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred -----CCCeEeCHHHHhcEEEEEECCCCEEEEEecC
Confidence 2578999999999999999999999999985
No 24
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=1.9e-51 Score=417.41 Aligned_cols=295 Identities=28% Similarity=0.410 Sum_probs=256.3
Q ss_pred eeecCCCceEEE---eeccceeEeCCCCCcccccCCCCcccCCCCCceeeCCeEEEEEecCce-EEEEEEEEEEEeCCeE
Q 011243 72 ETMRTPVRRYNL---HGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGA-ISGFFSQDNVKVGDLV 147 (490)
Q Consensus 72 v~IGTP~Q~~~v---TGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~dGs-~~G~~~~Dtv~igg~~ 147 (490)
|+|| ||++.| |||+++||++..|. ...|..++.|+|++|+ ++..++.|.+.|++|+ +.|.+++|+|+||+.+
T Consensus 21 i~iG--~q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~ 96 (323)
T 1izd_A 21 VTVG--DDTLGLDFDTGSADLWVFSSQTP-SSERSGHDYYTPGSSA-QKIDGATWSISYGDGSSASGDVYKDKVTVGGVS 96 (323)
T ss_dssp EEET--TEEEEEEEETTCCCEEECBTTSC-HHHHTTCCCBCCCTTC-EEEEEEEEEEECTTSCEEEEEEEEEEEEETTEE
T ss_pred EEEC--CEEEEEEEcCCCcceEEecCCCC-cccccCCCCCCccccC-CccCCCeEEEEcCCCCeEEEEEEEEEEEECCEE
Confidence 9999 899988 99999999999997 4457788899999999 7778899999999999 8999999999999999
Q ss_pred eeeeEEEEEEeeccccccccccceEEecccCcccc---CCCCchhhhhhhcCCCCCCeEEEEecCCCCCCCCcEEEECCC
Q 011243 148 VKNQDFIEATKEASITFLAAKFDGILGLGFQEISI---GKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGV 224 (490)
Q Consensus 148 v~~~~FG~~~~~~~~~~~~~~~~GIlGLG~~~~s~---~~~~~~~~~L~~qG~I~~~~FSl~L~~~~~~~~~G~L~fGGi 224 (490)
++++.||+++...+..+.....+||||||++..+. ...++++++|++| |.+++||+||++. ..|.|+|||+
T Consensus 97 v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~--i~~~~FS~~L~~~----~~G~l~fGg~ 170 (323)
T 1izd_A 97 YDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDNVKSS--LSEPIFAVALKHN----APGVYDFGYT 170 (323)
T ss_dssp EEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG--SSSSEEEEECCTT----SCEEEEESSC
T ss_pred ECceEEEEEEeccccccccCCCceEEecCcccccccCCCCCCCHHHHHHHh--ccCcEEEEEccCC----CCCEEEECCc
Confidence 99999999998765433345679999999987765 2567899999987 8999999999874 3899999999
Q ss_pred CCCCcccceEEEecc-ccceeEEEEceEEEcCeeccccCCCceEEEcCCCCCcccCHHHHHHHHHHhcCCcccchhhhHH
Q 011243 225 DPDHYKGEHTYVPVT-KKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTL 303 (490)
Q Consensus 225 D~~~~~G~l~~~p~~-~~~~w~V~l~~i~vgg~~i~~~~~~~~aiiDSGtt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~ 303 (490)
|+++|+|++.|+|+. ..++|.|.+++|++++ .+ ...+..++|||||+++++|++++++|.+++.+..
T Consensus 171 d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~--~~~~~~aiiDSGTs~~~lp~~~~~~i~~~i~ga~--------- 238 (323)
T 1izd_A 171 DSSKYTGSITYTDVDNSQGFWGFTADGYSIGS-DS--SSDSITGIADTGTTLLLLDDSIVDAYYEQVNGAS--------- 238 (323)
T ss_dssp CTTSEEEEEEEEECBCTTSSCEEEESEEEETT-EE--ECCCEEEEECTTCCSEEECHHHHHHHHTTSTTCE---------
T ss_pred CccccccceEEEECCCCCceEEEEECeEEECC-cc--cCCCceEEEeCCCcceeCCHHHHHHHHHhCCCcE---------
Confidence 999999999999997 5789999999999999 54 3567899999999999999999999999885430
Q ss_pred HHhhhHHHHHHHHhhcCchhhhccccccccCCCCCcccceeeeeccCCCCCCCCCCCCcccchhHHHHHHHHHHhhcchh
Q 011243 304 VDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNET 383 (490)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (490)
T Consensus 239 -------------------------------------------------------------------------------- 238 (323)
T 1izd_A 239 -------------------------------------------------------------------------------- 238 (323)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHhhhhhccCCCCCCCceeeeCCCCCCCCcEEEEECCEEEEeCcccceEeecccccceeeeeeEecccCCCCCCee
Q 011243 384 ADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLW 463 (490)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~p~l~f~f~g~~~~i~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ 463 (490)
+....|.|.+||+ ..+|+|+|+|+|++++||+++|+.+.. +...|++.|.+.+ ..+.|
T Consensus 239 --------------~~~~~g~~~~~C~--~~~P~i~f~fgg~~~~i~~~~~~~~~~--~~~~C~~~i~~~~----~~~~~ 296 (323)
T 1izd_A 239 --------------YDSSQGGYVFPSS--ASLPDFSVTIGDYTATVPGEYISFADV--GNGQTFGGIQSNS----GIGFS 296 (323)
T ss_dssp --------------EETTTTEEEEETT--CCCCCEEEEETTEEEEECHHHHEEEEC--STTEEEESEEECT----TTSSE
T ss_pred --------------EcCcCCEEEEECC--CCCceEEEEECCEEEecCHHHeEEecC--CCCeEEEEEEcCC----CCCcE
Confidence 0113467899998 579999999999999999999998753 2468999887542 34689
Q ss_pred eecHhhhcceeEEEeCCCCeEEEEEcC
Q 011243 464 ILGDVFMGRYHTVFDYGNLSIGFAEAA 490 (490)
Q Consensus 464 iLG~~fl~~~y~vfD~~~~~igfa~~~ 490 (490)
|||++|||++|+|||++|+|||||++|
T Consensus 297 IlG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1izd_A 297 IFGDVFLKSQYVVFDASGPRLGFAAQA 323 (323)
T ss_dssp EECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEChHHhcCEEEEEECCCCEEEEeeCC
Confidence 999999999999999999999999986
No 25
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=1e-51 Score=419.34 Aligned_cols=295 Identities=26% Similarity=0.434 Sum_probs=255.1
Q ss_pred eeecCCCceEEE---eeccceeEeCCCCCcccccCCCCcccCCCCCceeeCCeEEEEEecCce-EEEEEEEEEEEeCCeE
Q 011243 72 ETMRTPVRRYNL---HGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGA-ISGFFSQDNVKVGDLV 147 (490)
Q Consensus 72 v~IGTP~Q~~~v---TGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~dGs-~~G~~~~Dtv~igg~~ 147 (490)
|+|| ||++.| |||+++||++..|. ...|..++.|+|++|+ ++..++.|.+.|++|+ +.|.+++|+|++|+.+
T Consensus 21 i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~ 96 (323)
T 1bxo_A 21 VTIG--GTTLNLNFDTGSADLWVFSTELP-ASQQSGHSVYNPSATG-KELSGYTWSISYGDGSSASGNVFTDSVTVGGVT 96 (323)
T ss_dssp EEET--TEEEEEEEETTCCCEEECBTTSC-HHHHTTSCCBCHHHHC-EEEEEEEEEEECTTSCEEEEEEEEEEEEETTEE
T ss_pred EEEC--CEEEEEEEeCCCcceEEecCCCC-chhccCCCCCCcccCC-cccCCCeEEEEeCCCCeEEEEEEEEEEEECCEE
Confidence 9999 899988 99999999999997 4457788999999999 7778899999999999 8999999999999999
Q ss_pred eeeeEEEEEEeeccccccccccceEEecccCccccC---CCCchhhhhhhcCCCCCCeEEEEecCCCCCCCCcEEEECCC
Q 011243 148 VKNQDFIEATKEASITFLAAKFDGILGLGFQEISIG---KAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGV 224 (490)
Q Consensus 148 v~~~~FG~~~~~~~~~~~~~~~~GIlGLG~~~~s~~---~~~~~~~~L~~qG~I~~~~FSl~L~~~~~~~~~G~L~fGGi 224 (490)
++++.||+++...+..+.....+||||||++..+.. ..++++++|+++ |.+++||+||++. ..|.|+|||+
T Consensus 97 v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~L~~~----~~G~l~fGg~ 170 (323)
T 1bxo_A 97 AHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDTVKSS--LAQPLFAVALKHQ----QPGVYDFGFI 170 (323)
T ss_dssp EEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCCCHHHHHGGG--BSSSEEEEECCSS----SCEEEEESSC
T ss_pred ECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCCCCCHHHHHHHh--cCCcEEEEEEeCC----CCceEEEeCc
Confidence 999999999987554333457799999999877642 467899999987 8999999999874 3899999999
Q ss_pred CCCCcccceEEEecc-ccceeEEEEceEEEcCeeccccCCCceEEEcCCCCCcccCHHHHHHHHHHhcCCcccchhhhHH
Q 011243 225 DPDHYKGEHTYVPVT-KKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTL 303 (490)
Q Consensus 225 D~~~~~G~l~~~p~~-~~~~w~V~l~~i~vgg~~i~~~~~~~~aiiDSGtt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~ 303 (490)
|+++|+|++.|+|+. +.++|.|.+++|++++ . ...+..++|||||+++++|++++++|.+++.+..
T Consensus 171 d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~---~~~~~~aiiDSGTs~~~lP~~~~~~l~~~i~~a~--------- 237 (323)
T 1bxo_A 171 DSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGS-Q---SGDGFSGIADTGTTLLLLDDSVVSQYYSQVSGAQ--------- 237 (323)
T ss_dssp CGGGBSSCCEEEECBCTTSSCEEEEEEEEETT-E---EEEEEEEEECTTCSSEEECHHHHHHHHTTSTTCE---------
T ss_pred ChhhccCceEEEECCCCCCeEEEEEeeEEECC-c---cCCCceEEEeCCCCceeCCHHHHHHHHHhCCCce---------
Confidence 999999999999996 6789999999999999 2 2456789999999999999999999999884440
Q ss_pred HHhhhHHHHHHHHhhcCchhhhccccccccCCCCCcccceeeeeccCCCCCCCCCCCCcccchhHHHHHHHHHHhhcchh
Q 011243 304 VDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNET 383 (490)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (490)
T Consensus 238 -------------------------------------------------------------------------------- 237 (323)
T 1bxo_A 238 -------------------------------------------------------------------------------- 237 (323)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHhhhhhccCCCCCCCceeeeCCCCCCCCcEEEEECCEEEEeCcccceEeecccccceeeeeeEecccCCCCCCee
Q 011243 384 ADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLW 463 (490)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~p~l~f~f~g~~~~i~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ 463 (490)
.+...+.|.++|. ..+|+|+|+|+|++++||+++|+.+..+ +...|++.|.+.+ ..+.|
T Consensus 238 --------------~~~~~g~~~~~C~--~~~P~i~f~fgg~~~~l~~~~~~~~~~~-~~~~C~~~i~~~~----~~~~~ 296 (323)
T 1bxo_A 238 --------------QDSNAGGYVFDCS--TNLPDFSVSISGYTATVPGSLINYGPSG-DGSTCLGGIQSNS----GIGFS 296 (323)
T ss_dssp --------------EETTTTEEEECTT--CCCCCEEEEETTEEEEECHHHHEEEECS-SSSCEEESEEECT----TCSSE
T ss_pred --------------EcCcCCEEEEECC--CCCceEEEEECCEEEEECHHHeEEeccC-CCCeEEEEEECCC----CCCcE
Confidence 0113467899998 5799999999999999999999987532 3368999888542 34689
Q ss_pred eecHhhhcceeEEEeCCCCeEEEEEcC
Q 011243 464 ILGDVFMGRYHTVFDYGNLSIGFAEAA 490 (490)
Q Consensus 464 iLG~~fl~~~y~vfD~~~~~igfa~~~ 490 (490)
|||++|||++|+|||++|+|||||++|
T Consensus 297 ILG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1bxo_A 297 IFGDIFLKSQYVVFDSDGPQLGFAPQA 323 (323)
T ss_dssp EECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred EEChHHHcCEEEEEECCCCEEEEecCC
Confidence 999999999999999999999999986
No 26
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=3.3e-50 Score=410.91 Aligned_cols=294 Identities=26% Similarity=0.469 Sum_probs=249.8
Q ss_pred eeecCCCceEEE---eeccceeEeCCCCCcccccCCCCcccCCCCCceeeCCeEEEEEecCceEEEEEEEEEEEeCCeEe
Q 011243 72 ETMRTPVRRYNL---HGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFFSQDNVKVGDLVV 148 (490)
Q Consensus 72 v~IGTP~Q~~~v---TGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~dGs~~G~~~~Dtv~igg~~v 148 (490)
|+||||||++.| |||+++||++. +.|+|++|++ ..++.|.+.|++|++.|.+++|+|+||+.++
T Consensus 18 i~iGTP~q~~~v~~DTGSs~lWv~~~-----------~~y~~s~Ss~--~~~~~~~i~Yg~Gs~~G~~~~Dtv~~g~~~v 84 (340)
T 1wkr_A 18 VGVGSPATTYSLLVDTGSSNTWLGAD-----------KSYVKTSTSS--ATSDKVSVTYGSGSFSGTEYTDTVTLGSLTI 84 (340)
T ss_dssp EEETTTTEEEEEEEETTCCCCEECSS-----------SCCCCCTTCE--EEEEEEEEECSSCEEEEEEEEEEEEETTEEE
T ss_pred EEECCCCcEEEEEEeCCChhheecCC-----------CccCCcCCcc--ccCceEEEEECCcEEEEEEEEEEEEECCEEE
Confidence 999999999999 99999999742 4689888774 4678999999999999999999999999999
Q ss_pred eeeEEEEEEeeccccccccccceEEecccCcccc--------CCCCchhhhhhhcCCCCCCeEEEEecCCC-CCCCCcEE
Q 011243 149 KNQDFIEATKEASITFLAAKFDGILGLGFQEISI--------GKAIPVWYNMLDQGLVKEPVFSFWLNRDI-EGEEGGEI 219 (490)
Q Consensus 149 ~~~~FG~~~~~~~~~~~~~~~~GIlGLG~~~~s~--------~~~~~~~~~L~~qG~I~~~~FSl~L~~~~-~~~~~G~L 219 (490)
+++.||+++...+ + ...+||||||++..+. ...++++++|++||+|++++||+||++.. +....|.|
T Consensus 85 ~~~~fg~~~~~~~--~--~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l 160 (340)
T 1wkr_A 85 PKQSIGVASRDSG--F--DGVDGILGVGPVDLTVGTLSPHTSTSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGEL 160 (340)
T ss_dssp EEEEEEEEEEEES--C--TTCSEEEECSCGGGGTTSEESCTTCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEE
T ss_pred cceEEEEEEccCC--C--cCCCcEEECCccccccccccccccccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEE
Confidence 9999999998643 2 2579999999987764 34678999999999999999999998742 23357999
Q ss_pred EECCCCCCCcccceEEEeccc----cceeEEEEceEEEcC-eeccccCCCceEEEcCCCCCcccCHHHHHHHHHHhcCCc
Q 011243 220 VFGGVDPDHYKGEHTYVPVTK----KGYWQFEMGDVLIDG-ETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASG 294 (490)
Q Consensus 220 ~fGGiD~~~~~G~l~~~p~~~----~~~w~V~l~~i~vgg-~~i~~~~~~~~aiiDSGtt~~~lp~~~~~~l~~~~~~~~ 294 (490)
+|||+|+++|+|++.|+|+.. ..+|.|. .+|.+++ +.+. .+..++|||||++++||++++++|.+++++.
T Consensus 161 ~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i~v~~~~~l~---~~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~- 235 (340)
T 1wkr_A 161 TFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIRYGSSTSIL---SSTAGIVDTGTTLTLIASDAFAKYKKATGAV- 235 (340)
T ss_dssp EESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEEEETTTEEEE---EEEEEEECTTBCSEEECHHHHHHHHHHHTCE-
T ss_pred EEcccChhhcccceEEEECccCCCCcceEEEE-eeEEECCCeEcc---CCCeEEEeCCcccccCCHHHHHHHHHhhCCE-
Confidence 999999999999999999987 6899999 9999998 7664 3468999999999999999999998888655
Q ss_pred ccchhhhHHHHhhhHHHHHHHHhhcCchhhhccccccccCCCCCcccceeeeeccCCCCCCCCCCCCcccchhHHHHHHH
Q 011243 295 VISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWM 374 (490)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (490)
T Consensus 236 -------------------------------------------------------------------------------- 235 (340)
T 1wkr_A 236 -------------------------------------------------------------------------------- 235 (340)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhcchhhHHHHHhhhhhccCCCCCCCceeeeCCCCCCCCcEEEEECCEEEEeCcccceEeecc-----cccceeeee
Q 011243 375 QNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGE-----GVAAQCISG 449 (490)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~p~l~f~f~g~~~~i~~~~y~~~~~~-----~~~~~C~~~ 449 (490)
+....+.|.+||.....+|+|+|+|+|++++|+|++|+++... +....|++.
T Consensus 236 -----------------------~~~~~g~~~~~C~~~~~~p~i~f~f~g~~~~i~~~~yi~~~~~~~~~g~~~~~c~~~ 292 (340)
T 1wkr_A 236 -----------------------ADNNTGLLRLTTAQYANLQSLFFTIGGQTFELTANAQIWPRNLNTAIGGSASSVYLI 292 (340)
T ss_dssp -----------------------ECTTTSSEEECHHHHHTCCCEEEEETTEEEEECTGGGBCCGGGGGGGTCCSSCEEBC
T ss_pred -----------------------EcCCCCeEEeeccccccCCcEEEEECCEEEEEcHHHhccccccccccCCCCceEEEE
Confidence 0123467899998666899999999999999999999987542 123579998
Q ss_pred eEecccCCCCCCeeeecHhhhcceeEEEeCCCCeEEEEEcC
Q 011243 450 FTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 490 (490)
Q Consensus 450 ~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfa~~~ 490 (490)
+.+.+.+...+..||||++|||++|+|||++|+|||||+++
T Consensus 293 ~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 333 (340)
T 1wkr_A 293 VGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTS 333 (340)
T ss_dssp EEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEECT
T ss_pred EecCCCCCCCCcceEeChHhhhheEEEEeCCCCeEEEEecC
Confidence 88765333344679999999999999999999999999975
No 27
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=1e-49 Score=422.80 Aligned_cols=308 Identities=25% Similarity=0.405 Sum_probs=251.3
Q ss_pred eeecCCCceEEE---eeccceeEeCCCCCcccccCCCCcccCCCCCceeeCCeEEEEEecCceEEEEEEEEEEEeCC-eE
Q 011243 72 ETMRTPVRRYNL---HGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFFSQDNVKVGD-LV 147 (490)
Q Consensus 72 v~IGTP~Q~~~v---TGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~dGs~~G~~~~Dtv~igg-~~ 147 (490)
|+||||||++.| |||+++||++..| |..++.|+|++|+|++..++.|.+.|++|++.|.+++|+|+|++ ..
T Consensus 80 i~iGTP~Q~~~v~~DTGSs~lWV~~~~c-----c~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~~ 154 (455)
T 3lpj_A 80 MTVGSPPQTLNILVDTGSSNFAVGAAPH-----PFLHRYYQRQLSSTYRDLRKGVYVPYTQGKWEGELGTDLVSIPHGPN 154 (455)
T ss_dssp EEETTTTEEEEEEEETTCCCEEEECSCC-----TTCSCCCCGGGCTTCEEEEEEEEEECSSCEEEEEEEEEEEECTTSCS
T ss_pred EEECCCCeEEEEEEcCCCcceEEecccc-----cccCCcccCCCCCCcccCCccEEEEeCCeEEEEEEEEEEEEECCCcc
Confidence 999999999999 9999999998877 66788999999999999999999999999999999999999984 33
Q ss_pred ee-eeEEEEEEeeccccccccccceEEecccCccccC--CCCchhhhhhhcCCCCCCeEEEEecCCCC--------CCCC
Q 011243 148 VK-NQDFIEATKEASITFLAAKFDGILGLGFQEISIG--KAIPVWYNMLDQGLVKEPVFSFWLNRDIE--------GEEG 216 (490)
Q Consensus 148 v~-~~~FG~~~~~~~~~~~~~~~~GIlGLG~~~~s~~--~~~~~~~~L~~qG~I~~~~FSl~L~~~~~--------~~~~ 216 (490)
++ .+.|+++......+......+||||||++..+.. ..++++++|++||.|+ ++||+||++... ....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~-~~FS~~L~~~~~~~~~~~~~~~~~ 233 (455)
T 3lpj_A 155 VTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGAGFPLNQSEVLASVG 233 (455)
T ss_dssp CEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCCSSCCCHHHHHHSCC
T ss_pred eeeEEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHHHHHccCCC-ceeEEEeccccccccccccccCCC
Confidence 33 3567887766543333467799999999887653 3788999999999997 999999986311 2358
Q ss_pred cEEEECCCCCCCcccceEEEeccccceeEEEEceEEEcCeeccccC---CCceEEEcCCCCCcccCHHHHHHHHHHhcCC
Q 011243 217 GEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCS---TGCNAIADSGTSLLAGPTTIITQINHAIGAS 293 (490)
Q Consensus 217 G~L~fGGiD~~~~~G~l~~~p~~~~~~w~V~l~~i~vgg~~i~~~~---~~~~aiiDSGtt~~~lp~~~~~~l~~~~~~~ 293 (490)
|.|+|||+|+++|+|++.|+|+....+|.|.+++|.|+++.+.+.. ....++|||||++++||++++++|.+++++.
T Consensus 234 G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~ 313 (455)
T 3lpj_A 234 GSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAA 313 (455)
T ss_dssp EEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGGGSSCEEECTTSSSEEEEHHHHHHHHHHHHHH
T ss_pred ceEEECCcCcccccCceEEEecCCCceeEEEEeEEEECCEEccccccccCCCeEEEECCCcceeCCHHHHHHHHHHhhhh
Confidence 9999999999999999999999999999999999999999876432 2568999999999999999999999999765
Q ss_pred cccchhhhHHHHhhhHHHHHHHHhhcCchhhhccccccccCCCCCcccceeeeeccCCCCCCCCCCCCcccchhHHHHHH
Q 011243 294 GVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIW 373 (490)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (490)
.. ..
T Consensus 314 ~~-----------------------~~----------------------------------------------------- 317 (455)
T 3lpj_A 314 SS-----------------------TE----------------------------------------------------- 317 (455)
T ss_dssp TT-----------------------TS-----------------------------------------------------
T ss_pred cc-----------------------cc-----------------------------------------------------
Confidence 00 00
Q ss_pred HHHHhhcchhhHHHHHhhhhhccCCCCC-CCceeeeCCCCCC-----CCcEEEEECCE------EEEeCcccceEeeccc
Q 011243 374 MQNKLRRNETADQILNYVNQLCDRLPSP-NGESAVDCDNLSS-----MPNVSFTIGGK------VFDLAPNEYVLEVGEG 441 (490)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~c~~~~~-----~p~l~f~f~g~------~~~i~~~~y~~~~~~~ 441 (490)
.++.. ...|.++|..... +|+|+|+|+|. +++|+|++|+.+..+.
T Consensus 318 -----------------------~~~~~~~~g~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~~ 374 (455)
T 3lpj_A 318 -----------------------KFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDV 374 (455)
T ss_dssp -----------------------CCCHHHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECCT
T ss_pred -----------------------ccCcccccCcceecccccCCchhcCCcEEEEEcCCCcCceEEEEECHHHheEeccCC
Confidence 00000 0124578876654 89999999875 5999999999987643
Q ss_pred c--cceeee-eeEecccCCCCCCeeeecHhhhcceeEEEeCCCCeEEEEEcC
Q 011243 442 V--AAQCIS-GFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 490 (490)
Q Consensus 442 ~--~~~C~~-~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfa~~~ 490 (490)
+ ...|+. .+.. ..+.||||++|||++|+|||++|+|||||+++
T Consensus 375 ~~~~~~C~~f~~~~------~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~ 420 (455)
T 3lpj_A 375 ATSQDDCYKFAISQ------SSTGTVMGAVIMEGFYVVFDRARKRIGFAVSA 420 (455)
T ss_dssp TCCSCEEEEECEEE------ESSCEEECHHHHTTEEEEEETTTTEEEEEEET
T ss_pred CCCCceEEEEeccC------CCCcEEEChHHhCCeEEEEECCCCEEEEEecc
Confidence 2 257996 3321 23579999999999999999999999999974
No 28
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=1.4e-48 Score=404.98 Aligned_cols=306 Identities=24% Similarity=0.449 Sum_probs=245.7
Q ss_pred eeecCCCceEEE---eeccceeEeCCCCCcccccCCCCcccCCCCCceeeCCeEEEEEecCceEEEEEEEEEEEeCCeEe
Q 011243 72 ETMRTPVRRYNL---HGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFFSQDNVKVGDLVV 148 (490)
Q Consensus 72 v~IGTP~Q~~~v---TGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~dGs~~G~~~~Dtv~igg~~v 148 (490)
|+||||||++.| |||+++||++..|. .| ++.|+|++|+|++..++.|.+.|++|++.|.+++|+|+|++...
T Consensus 19 i~iGTP~q~~~v~~DTGSs~lWv~~~~c~---~~--~~~f~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~i~~~~~ 93 (383)
T 2ewy_A 19 MLIGTPPQKLQILVDTGSSNFAVAGTPHS---YI--DTYFDTERSSTYRSKGFDVTVKYTQGSWTGFVGEDLVTIPKGFN 93 (383)
T ss_dssp EEETTTTEEEEEEEETTCCCEEEECSCBT---TB--SCCCCGGGCTTCEEEEEEEEEECSSCEEEEEEEEEEEEETTTEE
T ss_pred EEecCCCceEEEEEecCCCceEEecCCCC---cc--ccCcccccCccceeCCceEEEEECCcEEEEEEEEEEEEECCCcc
Confidence 999999999999 99999999998884 34 67899999999999999999999999999999999999986332
Q ss_pred e--eeEEEEEEeeccccccccccceEEecccCcccc--CCCCchhhhhhhcCCCCCCeEEEEecCC-----CCCCCCcEE
Q 011243 149 K--NQDFIEATKEASITFLAAKFDGILGLGFQEISI--GKAIPVWYNMLDQGLVKEPVFSFWLNRD-----IEGEEGGEI 219 (490)
Q Consensus 149 ~--~~~FG~~~~~~~~~~~~~~~~GIlGLG~~~~s~--~~~~~~~~~L~~qG~I~~~~FSl~L~~~-----~~~~~~G~L 219 (490)
. .+.|++.....+.+......+||||||++..+. ....+++++|++|+.| +++||+||++. ......|.|
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~~q~~i-~~~FS~~l~~~~~~~~~~~~~~G~l 172 (383)
T 2ewy_A 94 TSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETFFDSLVTQANI-PNVFSMQMCGAGLPVAGSGTNGGSL 172 (383)
T ss_dssp EEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHHTC-CSCEEEEECCC---------CCEEE
T ss_pred ceeEEEEEEEEeecceeeccCcCceEEecCchhcccccccccCHHHHHHHccCC-CcceEEEeeccccccccCCCCCeEE
Confidence 2 355777655433222235679999999988764 4577899999999999 79999999752 123458999
Q ss_pred EECCCCCCCcccceEEEeccccceeEEEEceEEEcCeeccccCC---CceEEEcCCCCCcccCHHHHHHHHHHhcCCccc
Q 011243 220 VFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCST---GCNAIADSGTSLLAGPTTIITQINHAIGASGVI 296 (490)
Q Consensus 220 ~fGGiD~~~~~G~l~~~p~~~~~~w~V~l~~i~vgg~~i~~~~~---~~~aiiDSGtt~~~lp~~~~~~l~~~~~~~~~~ 296 (490)
+|||+|+++|.|++.|+|+....+|.|.+++|.|+++.+.+... ...++|||||++++||++++++|.+++++....
T Consensus 173 ~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~ 252 (383)
T 2ewy_A 173 VLGGIEPSLYKGDIWYTPIKEEWYYQIEILKLEIGGQSLNLDCREYNADKAIVDSGTTLLRLPQKVFDAVVEAVARASLI 252 (383)
T ss_dssp EETSCCGGGCCSCEEEEECSSBTTBBCCEEEEEETTEECCCCTTTTTSSCEEECTTCSSEEEEHHHHHHHHHHHHHTTCS
T ss_pred EeCccchhhccCccEEEecCCCceEEEEEEEEEECCEEccccccccCCccEEEEcCCccccCCHHHHHHHHHHHhhhccc
Confidence 99999999999999999999889999999999999998764322 468999999999999999999999999766100
Q ss_pred chhhhHHHHhhhHHHHHHHHhhcCchhhhccccccccCCCCCcccceeeeeccCCCCCCCCCCCCcccchhHHHHHHHHH
Q 011243 297 SQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQN 376 (490)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (490)
.
T Consensus 253 ----------------------------------------------------~--------------------------- 253 (383)
T 2ewy_A 253 ----------------------------------------------------P--------------------------- 253 (383)
T ss_dssp ----------------------------------------------------S---------------------------
T ss_pred ----------------------------------------------------c---------------------------
Confidence 0
Q ss_pred HhhcchhhHHHHHhhhhhccCCCCCC---CceeeeCCCCC-----CCCcEEEEECCE------EEEeCcccceEeecc-c
Q 011243 377 KLRRNETADQILNYVNQLCDRLPSPN---GESAVDCDNLS-----SMPNVSFTIGGK------VFDLAPNEYVLEVGE-G 441 (490)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~c~~~~-----~~p~l~f~f~g~------~~~i~~~~y~~~~~~-~ 441 (490)
..+. ..|.++|...+ .+|.|+|+|+|. +++|+|++|+.+..+ .
T Consensus 254 ----------------------~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~ 311 (383)
T 2ewy_A 254 ----------------------EFSDGFWTGSQLACWTNSETPWSYFPKISIYLRDENSSRSFRITILPQLYIQPMMGAG 311 (383)
T ss_dssp ----------------------CCCHHHHHTSEEEEECSSSCGGGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECCCT
T ss_pred ----------------------cCccccccccccccccCCcccHhhCCcEEEEECCCCCCceEEEEEChHHheeecccCC
Confidence 0000 12456786542 589999999863 799999999988642 2
Q ss_pred ccceeee-eeEecccCCCCCCeeeecHhhhcceeEEEeCCCCeEEEEEcC
Q 011243 442 VAAQCIS-GFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 490 (490)
Q Consensus 442 ~~~~C~~-~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfa~~~ 490 (490)
....|+. .+.+ ..+.||||++|||++|+|||++|+|||||+++
T Consensus 312 ~~~~C~~~~i~~------~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~ 355 (383)
T 2ewy_A 312 LNYECYRFGISP------STNALVIGATVMEGFYVIFDRAQKRVGFAASP 355 (383)
T ss_dssp TCSEEEEESEEE------ESSCEEECHHHHTTEEEEEETTTTEEEEEECT
T ss_pred CCceeEEEEecC------CCCcEEEChHHhCCeeEEEECCCCeEEEEecc
Confidence 3457985 4543 13479999999999999999999999999974
No 29
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=5.8e-49 Score=410.45 Aligned_cols=308 Identities=25% Similarity=0.402 Sum_probs=248.5
Q ss_pred eeecCCCceEEE---eeccceeEeCCCCCcccccCCCCcccCCCCCceeeCCeEEEEEecCceEEEEEEEEEEEeC-CeE
Q 011243 72 ETMRTPVRRYNL---HGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFFSQDNVKVG-DLV 147 (490)
Q Consensus 72 v~IGTP~Q~~~v---TGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~dGs~~G~~~~Dtv~ig-g~~ 147 (490)
|+||||||++.| |||+++||++..| |..++.|+|++|+|++..++.|.+.|++|++.|.+++|+|+|+ +..
T Consensus 34 i~iGTP~q~~~v~~DTGSs~lWv~~~~c-----~~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~D~v~ig~~~~ 108 (402)
T 3vf3_A 34 MTVGSPPQTLNILVDTGSSNFAVGAAPH-----PFLHRYYQRQLSSTYRDLRKGVYVPYTQGKWEGELGTDLVSIPHGPN 108 (402)
T ss_dssp EEETTTTEEEEEEEETTCCCEEEECSCC-----TTCSCCCCGGGCTTCEEEEEEEEEECSSCEEEEEEEEEEEECTTSCS
T ss_pred EEECCCCeEEEEEEeCCCCceEEccCCC-----CcccCCcCcccCcccccCCCEEEEEECcEEEEEEEEEEEEEECCccc
Confidence 999999999999 9999999999877 6678899999999999999999999999999999999999998 454
Q ss_pred eee-eEEEEEEeeccccccccccceEEecccCccccC--CCCchhhhhhhcCCCCCCeEEEEecCCC--------CCCCC
Q 011243 148 VKN-QDFIEATKEASITFLAAKFDGILGLGFQEISIG--KAIPVWYNMLDQGLVKEPVFSFWLNRDI--------EGEEG 216 (490)
Q Consensus 148 v~~-~~FG~~~~~~~~~~~~~~~~GIlGLG~~~~s~~--~~~~~~~~L~~qG~I~~~~FSl~L~~~~--------~~~~~ 216 (490)
++. +.|+++.............+||||||++..+.. ..++++++|++||.|+ ++||+||++.. .....
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~-~~FS~~l~~~~~~~~~~~~~~~~~ 187 (402)
T 3vf3_A 109 VTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGAGFPLNQSEVLASVG 187 (402)
T ss_dssp CEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCCC-------------
T ss_pred cceeeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCcHHHHHHHccCCc-cceEEEeecccccccccccccCCC
Confidence 443 346776655443223456799999999887654 3788999999999997 99999997531 03458
Q ss_pred cEEEECCCCCCCcccceEEEeccccceeEEEEceEEEcCeeccccC---CCceEEEcCCCCCcccCHHHHHHHHHHhcCC
Q 011243 217 GEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCS---TGCNAIADSGTSLLAGPTTIITQINHAIGAS 293 (490)
Q Consensus 217 G~L~fGGiD~~~~~G~l~~~p~~~~~~w~V~l~~i~vgg~~i~~~~---~~~~aiiDSGtt~~~lp~~~~~~l~~~~~~~ 293 (490)
|.|+|||+|+++|+|++.|+|+....+|.|.+++|.++++.+.+.. ....++|||||++++||.+++++|.+++++.
T Consensus 188 G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~ 267 (402)
T 3vf3_A 188 GSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAA 267 (402)
T ss_dssp EEEEESSCCGGGEEEEEEEEECSSBTTBEECEEEEEETTEECCCCGGGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHH
T ss_pred CEEEeCCcCcccccCceEEEeCCcCcEEEEEEeEEEECCEEecccccccCCCeEEEECCCCcccCCHHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999876432 2568999999999999999999999999665
Q ss_pred cccchhhhHHHHhhhHHHHHHHHhhcCchhhhccccccccCCCCCcccceeeeeccCCCCCCCCCCCCcccchhHHHHHH
Q 011243 294 GVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIW 373 (490)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (490)
.. .
T Consensus 268 ~~-----------------------~------------------------------------------------------ 270 (402)
T 3vf3_A 268 SS-----------------------T------------------------------------------------------ 270 (402)
T ss_dssp TT-----------------------T------------------------------------------------------
T ss_pred cc-----------------------c------------------------------------------------------
Confidence 10 0
Q ss_pred HHHHhhcchhhHHHHHhhhhhccCCCCC-CCceeeeCCCCC-----CCCcEEEEECCE------EEEeCcccceEeeccc
Q 011243 374 MQNKLRRNETADQILNYVNQLCDRLPSP-NGESAVDCDNLS-----SMPNVSFTIGGK------VFDLAPNEYVLEVGEG 441 (490)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~c~~~~-----~~p~l~f~f~g~------~~~i~~~~y~~~~~~~ 441 (490)
..++.. ...|.++|.... .+|+|+|+|++. +++|+|++|+.+..+.
T Consensus 271 ----------------------~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~~ 328 (402)
T 3vf3_A 271 ----------------------EKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDV 328 (402)
T ss_dssp ----------------------SCCCTTGGGTCSCEEEETTCCCGGGSCCEEEEEECSSTTEEEEEEECHHHHEEECCCG
T ss_pred ----------------------cccCccccccccccccccccchHhhCCceEEEEecCCCCceEEEEECHHHheehhccC
Confidence 000000 012357887654 689999999875 5999999999986543
Q ss_pred cc--ceeee-eeEecccCCCCCCeeeecHhhhcceeEEEeCCCCeEEEEEcC
Q 011243 442 VA--AQCIS-GFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 490 (490)
Q Consensus 442 ~~--~~C~~-~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfa~~~ 490 (490)
+. ..|+. .+.. ..+.||||++|||++|+|||++++|||||+++
T Consensus 329 ~~~~~~C~~~~~~~------~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~ 374 (402)
T 3vf3_A 329 ATSQDDCYKFAISQ------SSTGTVMGAVIMEGFYVVFDRARKRIGFAVSA 374 (402)
T ss_dssp GGTTEEEEEECEEE------ESSCEEECHHHHTTEEEEEEGGGTEEEEEEET
T ss_pred CCCCceEEEEeccC------CCCcEEEChHHhCCeEEEEECCCCEEEEEecc
Confidence 22 47995 4332 23579999999999999999999999999974
No 30
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=3.6e-48 Score=403.72 Aligned_cols=308 Identities=25% Similarity=0.392 Sum_probs=246.5
Q ss_pred eeecCCCceEEE---eeccceeEeCCCCCcccccCCCCcccCCCCCceeeCCeEEEEEecCceEEEEEEEEEEEeC-CeE
Q 011243 72 ETMRTPVRRYNL---HGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFFSQDNVKVG-DLV 147 (490)
Q Consensus 72 v~IGTP~Q~~~v---TGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~dGs~~G~~~~Dtv~ig-g~~ 147 (490)
|+||||||++.| |||+++||++..|. ..++.|+|++|+|++..++.|.+.|++|++.|.+++|+|+|+ +..
T Consensus 27 i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~-----~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~g~~ 101 (395)
T 2qp8_A 27 MTVGSPPQTLNILVDTGSSNFAVGAAPHP-----FLHRYYQRQLSSTYRDLRKGVYVPYTQGKWEGELGTDLVSIPHGPN 101 (395)
T ss_dssp EEETTTTEEEEEEEETTCCCEEEECSCCT-----TCSCCCCGGGCTTCEEEEEEEEEECSSCEEEEEEEEEEEECTTSCS
T ss_pred EEecCCCceEEEEEecCCCceEEECCCCc-----cccCCcCcccCCCceeCCceEEEEECCcEEEEEEEeEEEEECCCCC
Confidence 999999999999 99999999998874 236789999999999999999999999999999999999998 555
Q ss_pred ee-eeEEEEEEeeccccccccccceEEecccCccccC--CCCchhhhhhhcCCCCCCeEEEEecCCC--------CCCCC
Q 011243 148 VK-NQDFIEATKEASITFLAAKFDGILGLGFQEISIG--KAIPVWYNMLDQGLVKEPVFSFWLNRDI--------EGEEG 216 (490)
Q Consensus 148 v~-~~~FG~~~~~~~~~~~~~~~~GIlGLG~~~~s~~--~~~~~~~~L~~qG~I~~~~FSl~L~~~~--------~~~~~ 216 (490)
++ .+.|++.......+......+||||||++..+.. ..++++++|++|+.|+ ++||+||++.. .....
T Consensus 102 ~~~~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~l~~q~~i~-~~FS~~L~~~~~~~~~~~~~~~~~ 180 (395)
T 2qp8_A 102 VTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGAGFPLNQSEVLASVG 180 (395)
T ss_dssp CEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCCSSCCCHHHHHHSCC
T ss_pred ceEEEEEEEEEccCcccccccCccceEEcCchhhccCCCCCCCHHHHHHHccCCc-ceEEEEeccccccccccccccCCC
Confidence 44 3567776654332222356799999999877643 5778999999999997 89999998631 01358
Q ss_pred cEEEECCCCCCCcccceEEEeccccceeEEEEceEEEcCeeccccC---CCceEEEcCCCCCcccCHHHHHHHHHHhcCC
Q 011243 217 GEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCS---TGCNAIADSGTSLLAGPTTIITQINHAIGAS 293 (490)
Q Consensus 217 G~L~fGGiD~~~~~G~l~~~p~~~~~~w~V~l~~i~vgg~~i~~~~---~~~~aiiDSGtt~~~lp~~~~~~l~~~~~~~ 293 (490)
|.|+|||+|+++|+|++.|+|+....+|.|.+++|+|+++.+.+.. ....++|||||++++||++++++|.+++++.
T Consensus 181 G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~ 260 (395)
T 2qp8_A 181 GSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAA 260 (395)
T ss_dssp EEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHH
T ss_pred cEEEECCcCcccccCceEEeccCCCceEEEEEEEEEECCEEcccCccccCCceEEEEcCCCcEecCHHHHHHHHHHHhhh
Confidence 9999999999999999999999988999999999999999875432 2468999999999999999999999998655
Q ss_pred cccchhhhHHHHhhhHHHHHHHHhhcCchhhhccccccccCCCCCcccceeeeeccCCCCCCCCCCCCcccchhHHHHHH
Q 011243 294 GVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIW 373 (490)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (490)
.. .+
T Consensus 261 ~~------------------------~~---------------------------------------------------- 264 (395)
T 2qp8_A 261 SS------------------------TE---------------------------------------------------- 264 (395)
T ss_dssp TT------------------------TS----------------------------------------------------
T ss_pred cc------------------------cc----------------------------------------------------
Confidence 00 00
Q ss_pred HHHHhhcchhhHHHHHhhhhhccCCCCC-CCceeeeCCCCC-----CCCcEEEEECCE------EEEeCcccceEeecc-
Q 011243 374 MQNKLRRNETADQILNYVNQLCDRLPSP-NGESAVDCDNLS-----SMPNVSFTIGGK------VFDLAPNEYVLEVGE- 440 (490)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~c~~~~-----~~p~l~f~f~g~------~~~i~~~~y~~~~~~- 440 (490)
..+.. ...+.++|.... .+|+|+|+|+|. +++|+|++|+.+..+
T Consensus 265 -----------------------~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~p~~yi~~~~~~ 321 (395)
T 2qp8_A 265 -----------------------KFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDV 321 (395)
T ss_dssp -----------------------CCCHHHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECCT
T ss_pred -----------------------cCCccccccccccccccccchHhhCCcEEEEEccCCCCceEEEEECHHHhEeecccC
Confidence 00000 011345776543 489999999864 799999999998653
Q ss_pred -cccceee-eeeEecccCCCCCCeeeecHhhhcceeEEEeCCCCeEEEEEcC
Q 011243 441 -GVAAQCI-SGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 490 (490)
Q Consensus 441 -~~~~~C~-~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfa~~~ 490 (490)
.+...|+ +.+.+. .+.||||++|||++|+|||++|+|||||+++
T Consensus 322 ~~~~~~C~~~~i~~~------~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~ 367 (395)
T 2qp8_A 322 ATSQDDCYKFAISQS------STGTVMGAVIMEGFYVVFDRARKRIGFAVSA 367 (395)
T ss_dssp TCCSCEEEEECEEEE------SSCEEECHHHHTTEEEEEETTTTEEEEEEET
T ss_pred CCCCceEEEEEecCC------CCcEEEChHHhCCeeEEEECCCCEEEEEecc
Confidence 2335897 466531 2579999999999999999999999999974
No 31
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=1.7e-46 Score=392.14 Aligned_cols=304 Identities=17% Similarity=0.262 Sum_probs=237.6
Q ss_pred eeecCCCceEEE---eeccceeEeCC-----------CCCcccccCCCCcc------cCCCCCceeeCCeEEEEEec-Cc
Q 011243 72 ETMRTPVRRYNL---HGSSNLWVPSA-----------KCYFSVSCYFHSKY------KSSHSSTYKRNGTSAAIQYG-TG 130 (490)
Q Consensus 72 v~IGTP~Q~~~v---TGSs~~WV~s~-----------~C~~~~~C~~~~~y------~p~~SsT~~~~~~~~~~~Y~-dG 130 (490)
|+||||||++.| |||+++||++. .|. ...|..++.| ++..|+ +....+.|.+.|+ +|
T Consensus 27 i~iGTP~Q~~~v~~DTGSs~lWv~~~~~~~Sst~~~~~C~-s~~C~~~~~~~c~~c~~~~~s~-~~~~~~~~~~~Y~~d~ 104 (403)
T 3aup_A 27 LQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAPFCH-STQCSRANTHQCLSCPAASRPG-CHKNTCGLMSTNPITQ 104 (403)
T ss_dssp EEETTTTEEEEEEEETTCSSEEEECSSCCCCSSCBCCCTT-BHHHHHTTCCCEEECSSSCBTT-BCSSEEEEEEEETTTT
T ss_pred EECCCCCceeEEEEECCCCceeECCCCCCCCCCCCccCCC-CccccCccccCccccCCCCCCC-CCCCcceeEeecCCCC
Confidence 999999999999 99999999998 665 4568777777 555443 4556789999997 55
Q ss_pred e-EEEEEEEEEEEeCC-----------eEeeeeEEEEEEeeccccccccccceEEecccCccccCCCCchhhhhhhcCCC
Q 011243 131 A-ISGFFSQDNVKVGD-----------LVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLV 198 (490)
Q Consensus 131 s-~~G~~~~Dtv~igg-----------~~v~~~~FG~~~~~~~~~~~~~~~~GIlGLG~~~~s~~~~~~~~~~L~~qG~I 198 (490)
+ +.|.+++|+|+|++ .+++++.||++.......+.....+||||||++..+ +..+|. ++.+
T Consensus 105 ~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s------~~~ql~-~~~~ 177 (403)
T 3aup_A 105 QTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHAPIS------LPNQLA-SHFG 177 (403)
T ss_dssp EEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSSTTCCEEEECSSSTTS------HHHHHH-HHHT
T ss_pred ceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCCCCCceEEECCCCCcC------HHHHHH-hhcC
Confidence 5 89999999999987 899999999998764321334567999999998664 556664 5567
Q ss_pred CCCeEEEEecCCCCCCCCcEEEECCCCCCCc--c-c-----ceEEEecccc--ceeEEEEceEEEcCeec-cccCC----
Q 011243 199 KEPVFSFWLNRDIEGEEGGEIVFGGVDPDHY--K-G-----EHTYVPVTKK--GYWQFEMGDVLIDGETT-GYCST---- 263 (490)
Q Consensus 199 ~~~~FSl~L~~~~~~~~~G~L~fGGiD~~~~--~-G-----~l~~~p~~~~--~~w~V~l~~i~vgg~~i-~~~~~---- 263 (490)
.+++||+||.+. ....|.|+||| |+.+| + | ++.|+|+... ++|.|.+++|.|+++.+ .....
T Consensus 178 ~~~~FS~~L~~~--~~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~~~~y~v~l~~i~v~g~~~~~~~~~~~~~ 254 (403)
T 3aup_A 178 LQRQFTTCLSRY--PTSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNSIRINQHSVFPLNKISSTI 254 (403)
T ss_dssp CCSEEEEECCSC--TTSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECTTSCEEECEEEEEETTEEEECC-------
T ss_pred CCCeEEEEcCCC--CCCCeeEEECC-CchhccccccccccCceeecccccCCCCcceEEEEEEEECCEEcccCChhHeee
Confidence 789999999885 23589999999 99888 6 6 9999999865 79999999999999887 43222
Q ss_pred ----CceEEEcCCCCCcccCHHHHHHHHHHhcCCcccchhhhHHHHhhhHHHHHHHHhhcCchhhhccccccccCCCCCc
Q 011243 264 ----GCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGF 339 (490)
Q Consensus 264 ----~~~aiiDSGtt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (490)
...++|||||++++||++++++|.+++.+.- +.
T Consensus 255 ~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~-------------~~------------------------------ 291 (403)
T 3aup_A 255 VGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQL-------------PK------------------------------ 291 (403)
T ss_dssp -----CCEEECSSCSSEEECHHHHHHHHHHHHHTS-------------CG------------------------------
T ss_pred ccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHh-------------cc------------------------------
Confidence 2359999999999999999999999985430 00
Q ss_pred ccceeeeeccCCCCCCCCCCCCcccchhHHHHHHHHHHhhcchhhHHHHHhhhhhccCCCCCCCceeeeCCCCCCCCcEE
Q 011243 340 SMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVS 419 (490)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~p~l~ 419 (490)
+..+. +.....|.++|+.+..+|.|+
T Consensus 292 ---~~~~~---------------------------------------------------~~~~~~~c~~c~~~~~~P~i~ 317 (403)
T 3aup_A 292 ---QAQVK---------------------------------------------------SVAPFGLCFNSNKINAYPSVD 317 (403)
T ss_dssp ---GGEEC---------------------------------------------------CCTTCSCEECGGGCCCCCCEE
T ss_pred ---ccccC---------------------------------------------------CCCCCCceEECCCcCcCCcEE
Confidence 00000 001223678998777899999
Q ss_pred EEECC---EEEEeCcccceEeecccccceeeeeeEecccCCCCCCeeeecHhhhcceeEEEeCCCCeEEE-EEc
Q 011243 420 FTIGG---KVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGF-AEA 489 (490)
Q Consensus 420 f~f~g---~~~~i~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igf-a~~ 489 (490)
|+|+| +.++|++++|+++..+ ...|+ +|...+. ..++.||||+.|||++|+|||++|+|||| |++
T Consensus 318 f~f~g~~~~~~~l~~~~y~~~~~~--~~~C~-~~~~~~~--~~~~~~ILG~~fl~~~yvvfD~~~~rIGf~A~~ 386 (403)
T 3aup_A 318 LVMDKPNGPVWRISGEDLMVQAQP--GVTCL-GVMNGGM--QPRAEITLGARQLEENLVVFDLARSRVGFSTSS 386 (403)
T ss_dssp EEESSTTCCEEEECHHHHEEEC-----CEEE-CEEECCS--CCSSSEEECHHHHTTSCEEEETTTTEEEEESSC
T ss_pred EEEcCCCceEEEEcccceEEEcCC--CeEEE-EEEcCCC--CCCCcEEEChHHhcCeEEEEECCCCEEEEeccc
Confidence 99987 4999999999997642 46899 8876532 12468999999999999999999999999 765
No 32
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=4.1e-46 Score=390.39 Aligned_cols=329 Identities=16% Similarity=0.198 Sum_probs=247.8
Q ss_pred CccEEEeeeeecccccccccccccccCceeecCCCceEEE---eeccceeEeCCC-----------CCcccccCCCCccc
Q 011243 44 DGLVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVRRYNL---HGSSNLWVPSAK-----------CYFSVSCYFHSKYK 109 (490)
Q Consensus 44 ~~~~~lPL~~~~~~~~~~~~~~l~~~~~v~IGTP~Q~~~v---TGSs~~WV~s~~-----------C~~~~~C~~~~~y~ 109 (490)
+..+.+|+.+....... ... |+||||||++.| |||+++||+|.. |. ...|..+..|+
T Consensus 6 ~~~~~~pv~~d~~~~~Y--~~~------i~iGTPpq~~~v~~DTGS~~lWv~c~~c~~Sst~~~v~C~-s~~C~~~~~~~ 76 (413)
T 3vla_A 6 PSALVVPVKKDASTLQY--VTT------INQRTPLVSENLVVDLGGRFLWVDCDQNYVSSTYRPVRCR-TSQCSLSGSIA 76 (413)
T ss_dssp CSEEEEEEEECTTTCCE--EEE------EEETTTTEEEEEEEETTCSSEEEECSSSCCCTTCEECBTT-SHHHHHTTCCE
T ss_pred CccEEEEeeecCCCCeE--EEE------EEcCCCCcceEEEEeCCChhhhcccCCCCCCCCcCccCCC-cccccccccCC
Confidence 35688999876422111 111 999999999999 999999999964 44 44677777787
Q ss_pred CCC-----CCceeeCCeEEEEEe-cCce-EEEEEEEEEEEeC---------CeEeeeeEEEEEEeeccccccccccceEE
Q 011243 110 SSH-----SSTYKRNGTSAAIQY-GTGA-ISGFFSQDNVKVG---------DLVVKNQDFIEATKEASITFLAAKFDGIL 173 (490)
Q Consensus 110 p~~-----SsT~~~~~~~~~~~Y-~dGs-~~G~~~~Dtv~ig---------g~~v~~~~FG~~~~~~~~~~~~~~~~GIl 173 (490)
+.. ++++....+.|.+.| ++|+ +.|.+++|+|+|+ +..++++.|||+....... ....++|||
T Consensus 77 ~~~c~s~~~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g-~~~~~dGIl 155 (413)
T 3vla_A 77 CGDCFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQN-LASGVVGMA 155 (413)
T ss_dssp EECCSSCCBTTBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTT-SCTTCCEEE
T ss_pred CcccccCCCCCCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccC-ccccccccc
Confidence 643 345556678999999 4766 7999999999997 2688999999998753221 235679999
Q ss_pred ecccCccccCCCCchhhhhhhcCCCCCCeEEEEecCCCCCCCCcEEEECCCCCC-----Ccccc-eEEEecccc------
Q 011243 174 GLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDPD-----HYKGE-HTYVPVTKK------ 241 (490)
Q Consensus 174 GLG~~~~s~~~~~~~~~~L~~qG~I~~~~FSl~L~~~~~~~~~G~L~fGGiD~~-----~~~G~-l~~~p~~~~------ 241 (490)
|||++..+ +..+|.+++.| +++||+||.+. ....|.|+|||+|.. ++.|+ +.|+|+...
T Consensus 156 GLg~~~lS------l~sql~~~~~i-~~~FS~cL~~~--~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~ 226 (413)
T 3vla_A 156 GLGRTRIA------LPSQFASAFSF-KRKFAMCLSGS--TSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSA 226 (413)
T ss_dssp ECSSSSSS------HHHHHHHHHTC-CSEEEEECCSC--SSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSS
T ss_pred ccCCCCcc------hHHHHhhhcCC-CceEEEeCCCC--CCCceEEEECCCcccccccccccCCceeEeecccCCccccc
Confidence 99998765 77899999999 89999999984 335899999999874 37888 999999754
Q ss_pred --------ceeEEEEceEEEcCeeccccC--------CCceEEEcCCCCCcccCHHHHHHHHHHhcCCcccchhhhHHHH
Q 011243 242 --------GYWQFEMGDVLIDGETTGYCS--------TGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVD 305 (490)
Q Consensus 242 --------~~w~V~l~~i~vgg~~i~~~~--------~~~~aiiDSGtt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~ 305 (490)
.+|.|.|++|.||++.+..+. ....++|||||++++||+++|++|.+++.+.- .
T Consensus 227 ~~~~~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~----------~ 296 (413)
T 3vla_A 227 TSTQGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKES----------A 296 (413)
T ss_dssp SCCTTCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHH----------H
T ss_pred cccccCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHh----------c
Confidence 699999999999999876432 35789999999999999999999999986540 0
Q ss_pred hhhHHHHHHHHhhcCchhhhccccccccCCCCCcccceeeeeccCCCCCCCCCCCCcccchhHHHHHHHHHHhhcchhhH
Q 011243 306 QYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNETAD 385 (490)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (490)
. ..+ +.+-..
T Consensus 297 ~----------~~~------------------------~~~~~~------------------------------------ 306 (413)
T 3vla_A 297 A----------RNI------------------------TRVASV------------------------------------ 306 (413)
T ss_dssp H----------TTC------------------------CEECCC------------------------------------
T ss_pred c----------cCC------------------------CcCCCC------------------------------------
Confidence 0 000 000000
Q ss_pred HHHHhhhhhccCCCCCCCceeeeCCC----CCCCCcEEEEECC--EEEEeCcccceEeecccccceeeeeeEecccCCCC
Q 011243 386 QILNYVNQLCDRLPSPNGESAVDCDN----LSSMPNVSFTIGG--KVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPR 459 (490)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~c~~----~~~~p~l~f~f~g--~~~~i~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~ 459 (490)
.....| |.+++.. ...+|+|+|+|+| +.++|++++|+++..+ ...|+ +|...+. ..
T Consensus 307 ----~~~~~C---------~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~--~~~Cl-~~~~~~~--~~ 368 (413)
T 3vla_A 307 ----APFGAC---------FSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIND--NVVCL-GVVDGGS--NL 368 (413)
T ss_dssp ----TTCSCE---------EECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEET--TEEEE-CEEEEES--SC
T ss_pred ----CCCcce---------eccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeCC--CcEEE-EEEecCC--Cc
Confidence 000112 2223321 1379999999987 8999999999998653 35797 6665442 23
Q ss_pred CCeeeecHhhhcceeEEEeCCCCeEEEEEc
Q 011243 460 GPLWILGDVFMGRYHTVFDYGNLSIGFAEA 489 (490)
Q Consensus 460 ~~~~iLG~~fl~~~y~vfD~~~~~igfa~~ 489 (490)
++.||||+.|||++|+|||++|+|||||++
T Consensus 369 ~~~~IlGd~fl~~~~vvfD~~~~riGfa~~ 398 (413)
T 3vla_A 369 RTSIVIGGHQLEDNLVQFDLATSRVGFSGT 398 (413)
T ss_dssp SSSEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred ccceeEehhhhcCeEEEEECCCCEEEEEEe
Confidence 468999999999999999999999999986
No 33
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=5.6e-43 Score=340.44 Aligned_cols=241 Identities=46% Similarity=0.907 Sum_probs=210.6
Q ss_pred CCeEeeeeEEEEEEeeccccccccccceEEecccCccccCCCCchhhhhhhcCCCCCCeEEEEecCCCCCCCCcEEEECC
Q 011243 144 GDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGG 223 (490)
Q Consensus 144 gg~~v~~~~FG~~~~~~~~~~~~~~~~GIlGLG~~~~s~~~~~~~~~~L~~qG~I~~~~FSl~L~~~~~~~~~G~L~fGG 223 (490)
||++++++.||+++...+..+.....+||||||++..+....++++++|++||+|++++||+||++.......|.|+|||
T Consensus 1 gg~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg 80 (241)
T 1lya_B 1 GGVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGG 80 (241)
T ss_dssp CCEEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETS
T ss_pred CCeEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECC
Confidence 57899999999999876655666778999999999887767788999999999999999999999875434589999999
Q ss_pred CCCCCcccceEEEeccccceeEEEEceEEEcCeeccccCCCceEEEcCCCCCcccCHHHHHHHHHHhcCCcccchhhhHH
Q 011243 224 VDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTL 303 (490)
Q Consensus 224 iD~~~~~G~l~~~p~~~~~~w~V~l~~i~vgg~~i~~~~~~~~aiiDSGtt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~ 303 (490)
+|+++|+|++.|+|+.+..+|.|.+++|+++++.+. +..+..+++||||+++++|++++++|.+++++..
T Consensus 81 ~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~--------- 150 (241)
T 1lya_B 81 TDSKYYKGSLSYLNVTRKAYWQVHLDQVEVASGLTL-CKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVP--------- 150 (241)
T ss_dssp CCGGGEEEEEEEEECSSBTTBEEEEEEEEETTSCEE-STTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE---------
T ss_pred cCHHHcCCceEEEECccccEEEEEEeEEEECCeeEe-ccCCCEEEEECCCccccCCHHHHHHHHHHhCCee---------
Confidence 999999999999999999999999999999998753 3567899999999999999999999999986550
Q ss_pred HHhhhHHHHHHHHhhcCchhhhccccccccCCCCCcccceeeeeccCCCCCCCCCCCCcccchhHHHHHHHHHHhhcchh
Q 011243 304 VDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNET 383 (490)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (490)
T Consensus 151 -------------------------------------------------------------------------------- 150 (241)
T 1lya_B 151 -------------------------------------------------------------------------------- 150 (241)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHhhhhhccCCCCCCCceeeeCCCCCCCCcEEEEECCEEEEeCcccceEeecccccceeeeeeEecccCCCCCCee
Q 011243 384 ADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLW 463 (490)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~p~l~f~f~g~~~~i~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ 463 (490)
...+.|.++|+....+|+|+|+|+|++++|+|++|+.+..+.+...|++.|.+.+.+...++.|
T Consensus 151 ----------------~~~g~~~~~C~~~~~~p~i~f~f~g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ 214 (241)
T 1lya_B 151 ----------------LIQGEYMIPCEKVSTLPAITLKLGGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLW 214 (241)
T ss_dssp ----------------EETTEEEEEGGGGGGSCCEEEEETTEEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCE
T ss_pred ----------------ccCCcEEEECCCCccCCeEEEEECCEEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeE
Confidence 1235689999987789999999999999999999999876544568999998776543456799
Q ss_pred eecHhhhcceeEEEeCCCCeEEEEEcC
Q 011243 464 ILGDVFMGRYHTVFDYGNLSIGFAEAA 490 (490)
Q Consensus 464 iLG~~fl~~~y~vfD~~~~~igfa~~~ 490 (490)
|||++|||++|+|||++|+|||||+++
T Consensus 215 ilG~~fl~~~y~vfD~~~~~igfA~~~ 241 (241)
T 1lya_B 215 ILGDVFIGRYYTVFDRDNNRVGFAEAA 241 (241)
T ss_dssp EECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EechHHhcceEEEEECCCCEEEEEEcC
Confidence 999999999999999999999999985
No 34
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=2e-43 Score=366.25 Aligned_cols=308 Identities=15% Similarity=0.231 Sum_probs=222.6
Q ss_pred eeecCCCceEEE-eeccceeEeCCC--------CCcccccCCCCcccCCCCCce------eeCCe-EEEEEecCce-EEE
Q 011243 72 ETMRTPVRRYNL-HGSSNLWVPSAK--------CYFSVSCYFHSKYKSSHSSTY------KRNGT-SAAIQYGTGA-ISG 134 (490)
Q Consensus 72 v~IGTP~Q~~~v-TGSs~~WV~s~~--------C~~~~~C~~~~~y~p~~SsT~------~~~~~-~~~~~Y~dGs-~~G 134 (490)
|+|||| +.+ |||+++||++.. |. ...|..++.|++..+++. ....+ .|.++|++|+ +.|
T Consensus 20 i~iGtP---v~~DTGSs~lWv~c~~~~~~~~~~C~-s~~C~~~~~~~~~sc~~~~~~~~~~~~~c~~f~i~YgdGs~~~G 95 (381)
T 1t6e_X 20 FHDGAS---LVLDVAGPLVWSTCDGGQPPAEIPCS-SPTCLLANAYPAPGCPAPSCGSDKHDKPCTAYPYNPVSGACAAG 95 (381)
T ss_dssp EETTEE---EEEETTCCCEEECCCTTCCCCCCBTT-SHHHHHHHSSCCTTCCCCCC------CBCEECCBCTTTCCBCCE
T ss_pred EeCCCE---EEEECCCCceEEeCCCCCCCCccCCC-CchhccccCCCCCCCCCccCCcCcCCCccccccccccCCceeeE
Confidence 999998 666 999999999854 43 345766667776533321 11223 6999999999 599
Q ss_pred EEEEEEEEeCC----eEeeee----EEEEEEeeccccccccccceEEecccCccccCCCCchhhhhhhcCCCCCCeEEEE
Q 011243 135 FFSQDNVKVGD----LVVKNQ----DFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFW 206 (490)
Q Consensus 135 ~~~~Dtv~igg----~~v~~~----~FG~~~~~~~~~~~~~~~~GIlGLG~~~~s~~~~~~~~~~L~~qG~I~~~~FSl~ 206 (490)
.+++|+|++++ ..++++ .|||+.......+ ....+||||||++..+ +..+|.++|++ +++||+|
T Consensus 96 ~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~~-~~~~dGIlGLg~~~~s------~~~ql~~~~~~-~~~FS~~ 167 (381)
T 1t6e_X 96 SLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASL-PRGSTGVAGLANSGLA------LPAQVASAQKV-ANRFLLC 167 (381)
T ss_dssp EEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTS-CTTEEEEEECSSSTTS------HHHHHHHHHTC-CSEEEEE
T ss_pred EEEEEEEEeeccCCCccccceeeeeEeecCcccccCCC-CCCCceEEEeCCCcch------hHHHHhhhccc-CceEEEE
Confidence 99999999984 567765 4699876522212 3567999999998765 67789999854 7999999
Q ss_pred ecCCCCCCCCcEEEECCCCCC--CcccceEEEecccc---ceeEEEEceEEEcCeeccccCC---CceEEEcCCCCCccc
Q 011243 207 LNRDIEGEEGGEIVFGGVDPD--HYKGEHTYVPVTKK---GYWQFEMGDVLIDGETTGYCST---GCNAIADSGTSLLAG 278 (490)
Q Consensus 207 L~~~~~~~~~G~L~fGGiD~~--~~~G~l~~~p~~~~---~~w~V~l~~i~vgg~~i~~~~~---~~~aiiDSGtt~~~l 278 (490)
|.+. ..|.|+|||+|.. ++.|++.|+|+... ++|.|.+++|+|+++.+..+.. ...++|||||++++|
T Consensus 168 L~~~----~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~vg~~~~~~~~~~~~~~~~iiDTGTtl~~l 243 (381)
T 1t6e_X 168 LPTG----GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEGALATGGVMLSTRLPYVLL 243 (381)
T ss_dssp CCSS----SCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETTEECCCCTTCSCTTCEEECSSCSSEEE
T ss_pred eCCC----CCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEEcCEEecCCHHHccCCCEEEECCCccEEe
Confidence 9875 3899999998765 58999999999753 4566999999999998865433 357999999999999
Q ss_pred CHHHHHHHHHHhcCCcccchhhhHHHHhhhHHHHHHHHhhcCchhhhccccccccCCCCCcccceeeeeccCCCCCCCCC
Q 011243 279 PTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGV 358 (490)
Q Consensus 279 p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (490)
|+++|++|.+++.+. .. + + ..++ .+++.+.
T Consensus 244 p~~~~~~l~~~~~~~-------------~~--------~---~----------~~~g-----~~~~~~~----------- 273 (381)
T 1t6e_X 244 RPDVYRPLMDAFTKA-------------LA--------A---Q----------HANG-----APVARAV----------- 273 (381)
T ss_dssp CHHHHHHHHHHHHHH-------------HH--------H---C----------------------CCEE-----------
T ss_pred CHHHHHHHHHHHHHh-------------hc--------c---c----------cccc-----ccccccC-----------
Confidence 999999999988544 00 0 0 0000 0000000
Q ss_pred CCCcccchhHHHHHHHHHHhhcchhhHHHHHhhhhhccCCCCCCCceeeeCCCC---------CCCCcEEEEEC-CEEEE
Q 011243 359 HDSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNL---------SSMPNVSFTIG-GKVFD 428 (490)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~---------~~~p~l~f~f~-g~~~~ 428 (490)
+...+..+|... ..+|+|+|+|+ |+.++
T Consensus 274 ------------------------------------------~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~gg~~~~ 311 (381)
T 1t6e_X 274 ------------------------------------------EAVAPFGVCYDTKTLGNNLGGYAVPNVQLGLDGGSDWT 311 (381)
T ss_dssp ------------------------------------------CCCTTCSCEEEGGGCCEETTEECCCCEEEEETTSCEEE
T ss_pred ------------------------------------------CCCCCCCccCCCCCCcccccCCcCCeEEEEECCCcEEE
Confidence 000011234322 26899999997 59999
Q ss_pred eCcccceEeecccccceeeeeeEecccC---CCCCCeeeecHhhhcceeEEEeCCCCeEEEEEcC
Q 011243 429 LAPNEYVLEVGEGVAAQCISGFTAFDVA---PPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 490 (490)
Q Consensus 429 i~~~~y~~~~~~~~~~~C~~~~~~~~~~---~~~~~~~iLG~~fl~~~y~vfD~~~~~igfa~~~ 490 (490)
|++++|+++..+ ...|+ +|...+.. ...++.||||+.|||++|+|||++|+|||||+++
T Consensus 312 l~~~~y~~~~~~--~~~Cl-~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~riGfA~~~ 373 (381)
T 1t6e_X 312 MTGKNSMVDVKQ--GTACV-AFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFSRLP 373 (381)
T ss_dssp ECHHHHEEEEET--TEEEE-SEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEEECC
T ss_pred eCCCeEEEEcCC--CeEEE-EEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEEEEeccc
Confidence 999999998643 35798 67654311 1123689999999999999999999999999974
No 35
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=2.7e-41 Score=328.78 Aligned_cols=218 Identities=67% Similarity=1.153 Sum_probs=198.2
Q ss_pred eeecCCCceEEE---eeccceeEeCCCCCcccccCCCCcccCCCCCceeeCCeEEEEEecCceEEEEEEEEEEEeCCeEe
Q 011243 72 ETMRTPVRRYNL---HGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFFSQDNVKVGDLVV 148 (490)
Q Consensus 72 v~IGTP~Q~~~v---TGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~dGs~~G~~~~Dtv~igg~~v 148 (490)
|+||||||++.| |||+++||++..|.....|..++.|+|++|+|++..++.+.+.|++|++.|.+++|+|++|+..+
T Consensus 19 i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~D~v~~g~~~v 98 (239)
T 1b5f_A 19 IGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRAHSMYESSDSSTYKENGTFGAIIYGTGSITGFFSQDSVTIGDLVV 98 (239)
T ss_dssp EEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCEEEEEEEEEEEEETTEEE
T ss_pred EEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCCCCCCCCccCCCeeeCCcEEEEEECCCcEEEEEEEEEEEECCcEE
Confidence 999999999999 99999999999996455798899999999999999999999999999999999999999999999
Q ss_pred eeeEEEEEEeeccccccccccceEEecccCccccCCCCchhhhhhhcCCCCCCeEEEEecCCCCCCCCcEEEECCCCCCC
Q 011243 149 KNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDPDH 228 (490)
Q Consensus 149 ~~~~FG~~~~~~~~~~~~~~~~GIlGLG~~~~s~~~~~~~~~~L~~qG~I~~~~FSl~L~~~~~~~~~G~L~fGGiD~~~ 228 (490)
+++.||++....+..+.....+||||||++..+ .+++++|++||+|++++||+||++..+....|.|+|||+|+++
T Consensus 99 ~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s----~p~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~ 174 (239)
T 1b5f_A 99 KEQDFIEATDEADNVFLHRLFDGILGLSFQTIS----VPVWYNMLNQGLVKERRFSFWLNRNVDEEEGGELVFGGLDPNH 174 (239)
T ss_dssp EEEEEEEEEEECHHHHTTCSCCEEEECSCCSSS----CCHHHHHHHTTCCSSSEEEEEECCSCSSSCCEEEEETSCCGGG
T ss_pred ccEEEEEEEeccCccccccCcceEEecCccccc----cHHHHHHHHCCCCCCCEEEEEEeCCCCCCCCeEEEECCcChhh
Confidence 999999998875544556678999999998765 5678899999999999999999986434568999999999999
Q ss_pred cccceEEEeccccceeEEEEceEEEcCeeccccCCCceEEEcCCCCCcccCHHHHHHHHHHhcCC
Q 011243 229 YKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGAS 293 (490)
Q Consensus 229 ~~G~l~~~p~~~~~~w~V~l~~i~vgg~~i~~~~~~~~aiiDSGtt~~~lp~~~~~~l~~~~~~~ 293 (490)
|.|++.|+|+...++|.|.+++|.|+++.+.++.....++|||||++++||++++++|.+++++.
T Consensus 175 ~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~~~~~i~~~iga~ 239 (239)
T 1b5f_A 175 FRGDHTYVPVTYQYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTAIVTQINHAIGAN 239 (239)
T ss_dssp EEEEEEEEEEEEETTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHHHHHHHHHHTTCC
T ss_pred ccCceEEEEcccCCeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCHHHHHHHHHHhCCC
Confidence 99999999999889999999999999998876666789999999999999999999999999763
No 36
>3rfi_A Asp; PSI, saposin, hydrolase; 1.90A {Solanum tuberosum}
Probab=99.82 E-value=5.9e-21 Score=162.46 Aligned_cols=107 Identities=44% Similarity=0.949 Sum_probs=77.9
Q ss_pred cCCcccchhhhHHHHhhhHHHHHHHHhhcCchhhhccccccccCCCCCcccceeeeeccCCCCCCCCCCCCcccchhHHH
Q 011243 291 GASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMA 370 (490)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (490)
++.|+++++|+.+||+||+.|+++|+++.+|+++|+++++|..++++..++++++|.++...+++. .+..+|.+|+++
T Consensus 2 ~a~g~~~~~C~~~V~~Y~~~ii~~l~~~~~P~~iC~~lglC~~~~~~~~~~~i~~vv~~~~~~~~~--~~~~~C~~Ce~~ 79 (108)
T 3rfi_A 2 SAMAIVSMECKTIVSQYGEMIWDLLVSGVRPDQVCSQAGLCFVDGAQHVSSNIKTVVERETEGSSV--GEAPLCTACEMA 79 (108)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHTTSSCC--------------------------CCHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHcCCcCCCcccccccccccccccccccccC--CCCCcChhHHHH
Confidence 456789999999999999999999999999999999999999999998899999999886555542 368899999999
Q ss_pred HHHHHHHhhcchhhHHHHHhhhhhccCCC
Q 011243 371 VIWMQNKLRRNETADQILNYVNQLCDRLP 399 (490)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (490)
|.|+|+.|++|.|+++|.++++++|.++|
T Consensus 80 V~~ie~~L~~N~Te~eI~~~l~k~C~~LP 108 (108)
T 3rfi_A 80 VVWMQNQLKQEGTKEKVLEYVNQLCEKIP 108 (108)
T ss_dssp HHHHHHHHTSHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhcCchHHHHHHHHHHHHhhCc
Confidence 99999999999999999999999999886
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.79 E-value=2e-19 Score=147.09 Aligned_cols=87 Identities=72% Similarity=1.234 Sum_probs=76.9
Q ss_pred CceeeeCCCCCCCCcEEEEECCEEEEeCcccceEeecccccceeeeeeEecccCCCCCCeeeecHhhhcceeEEEeCCCC
Q 011243 403 GESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNL 482 (490)
Q Consensus 403 ~~~~~~c~~~~~~p~l~f~f~g~~~~i~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~ 482 (490)
|.|.+||+..+++|+|+|+|+|+.++|+|++|+.+..+.+...|++++++.+.+ +.++.||||++|||++|+|||++|+
T Consensus 1 G~y~v~C~~~~~~P~i~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~-~~~~~~ILGd~Fl~~~y~vfD~~~~ 79 (87)
T 1b5f_B 1 EELQVDCNTLSSMPNVSFTIGGKKFGLTPEQYILKVGKGEATQCISGFTAMDAT-LLGPLWILGDVFMRPYHTVFDYGNL 79 (87)
T ss_dssp CCCEECGGGGGGCCCEEEEETTEEEEECHHHHEEEESCTTTCEEEESEEECCCB-SSSBEEEECHHHHTTEEEEEETTTT
T ss_pred CcEEEECCCCCcCCcEEEEECCEEEEECHHHhEEEccCCCCCEEEEEEEECCCC-CCCCeEEechHHhccEEEEEECCCC
Confidence 578999998888999999999999999999999987654456899999987643 4557999999999999999999999
Q ss_pred eEEEEEcC
Q 011243 483 SIGFAEAA 490 (490)
Q Consensus 483 ~igfa~~~ 490 (490)
|||||+++
T Consensus 80 riGfA~~~ 87 (87)
T 1b5f_B 80 LVGFAEAA 87 (87)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEcC
Confidence 99999985
No 38
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.65 E-value=1.5e-16 Score=132.71 Aligned_cols=74 Identities=49% Similarity=0.900 Sum_probs=69.1
Q ss_pred eeecCCCceEEE---eeccceeEeCCCCCc-ccccCCCCcccCCCCCceeeCCeEEEEEecCceEEEEEEEEEEEeCC
Q 011243 72 ETMRTPVRRYNL---HGSSNLWVPSAKCYF-SVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFFSQDNVKVGD 145 (490)
Q Consensus 72 v~IGTP~Q~~~v---TGSs~~WV~s~~C~~-~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~dGs~~G~~~~Dtv~igg 145 (490)
|+||||||++.| |||+++||++..|.. ...|..++.|+|++|+|++..++.|.+.|++|++.|.+++|+|+|+|
T Consensus 19 i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~~~~~y~p~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 19 IGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSDKSSTYVKNGTSFDIHYGSGSLSGYLSQDTVSVPC 96 (97)
T ss_dssp EEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCEEEEEEEEEEEEESC
T ss_pred EEECCCCeEEEEEEeCCCCceEEeEcCccCcccccCCCCCCCchhCCCceeCCCcEEEEECCcEEEEEEEEEEEEECC
Confidence 999999999999 999999999999952 14798899999999999999999999999999999999999999986
No 39
>2qyp_A Proactivator polypeptide; saposin, activator protein, alternative splicing, disease mutation, gaucher disease, glycoprotein, GM2- gangliosidosis; 2.45A {Homo sapiens} SCOP: a.64.1.1 PDB: 2z9a_A
Probab=97.53 E-value=8.3e-05 Score=60.42 Aligned_cols=40 Identities=40% Similarity=0.879 Sum_probs=35.8
Q ss_pred ccchhhhHHHHhhhHHHHHHHHhhcCchhhhccccccccC
Q 011243 295 VISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFD 334 (490)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (490)
.++++|++++++|++.|+++|.+..+|+++|..+++|..+
T Consensus 45 ~~~~~C~~~V~~y~~~ii~~l~~~~~P~~iC~~l~lC~~~ 84 (91)
T 2qyp_A 45 SLSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCSGT 84 (91)
T ss_dssp STTTTHHHHHHHHHHHHHHHHHHTCCHHHHHHTTTCC---
T ss_pred CcccchHHHHHHHHHHHHHHHHHcCCHHHHHhhcCCCCCc
Confidence 3799999999999999999999999999999999999764
No 40
>3bqp_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid binding protein, acid ceramidase,farber disease, lipid metabolism; 1.30A {Homo sapiens} PDB: 3bqq_C 2rb3_A 2r1q_A 2r0r_A
Probab=97.46 E-value=0.0001 Score=57.99 Aligned_cols=38 Identities=24% Similarity=0.713 Sum_probs=36.1
Q ss_pred ccchhhhHHHHhhhHHHHHHHHhhcCchhhhccccccc
Q 011243 295 VISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCT 332 (490)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (490)
.++++|+.++++|++.|+++|.+..+|+++|..+|+|.
T Consensus 42 ~~~~~C~~~v~~y~~~ii~~l~~~~~P~~iC~~l~~C~ 79 (80)
T 3bqp_A 42 PYQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACP 79 (80)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHTTSSC
T ss_pred ccchhhHHHHHHHHHHHHHHHHHCCCHHHHHhhcCCCC
Confidence 37899999999999999999999999999999999994
No 41
>2js9_A Saposin-like protein family protein 5; caenopore-5, saposin-like fold, antimicrobial protein; NMR {Caenorhabditis elegans} PDB: 2jsa_A
Probab=97.46 E-value=5.4e-05 Score=62.63 Aligned_cols=50 Identities=18% Similarity=0.373 Sum_probs=41.8
Q ss_pred HHHHHHHhcCC-cccchhhhHHHHhhhHHHHHHHHhhcCchhhhccccccc
Q 011243 283 ITQINHAIGAS-GVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCT 332 (490)
Q Consensus 283 ~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (490)
++++-+.++.. +++.++|++++++|++.|+++|.+..+|+++|..+++|.
T Consensus 49 L~~~C~~lp~~ipf~~~~C~~~V~~y~~~II~~L~~~~~P~~VC~~L~lC~ 99 (99)
T 2js9_A 49 FDAECKKLFHTIPFGTRECDHYVNSKVDPIIHELEGGTAPKDVCTKLNECP 99 (99)
T ss_dssp HHHHHHTGGGGSTTHHHHHHTTTTTTHHHHHHHHHHTCCTTHHHHHTTCCC
T ss_pred HHHHHHcCCCcchHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcCCCC
Confidence 34444455532 458999999999999999999999999999999999994
No 42
>1nkl_A NK-lysin; saposin fold, antibacterial peptide, tumourolytic peptide; NMR {Sus scrofa} SCOP: a.64.1.1
Probab=97.40 E-value=0.00013 Score=57.52 Aligned_cols=46 Identities=20% Similarity=0.510 Sum_probs=40.0
Q ss_pred HHHHHHhcCCcccchhhhHHHHhhhHHHHHHHHhhcCchhhhccccccc
Q 011243 284 TQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCT 332 (490)
Q Consensus 284 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (490)
+++-+.++. +.++|++++++|++.|+++|.+..+|+++|..+++|.
T Consensus 32 ~~~C~~lp~---~~~~C~~~V~~y~~~iI~~l~~~~~P~~IC~~l~lC~ 77 (78)
T 1nkl_A 32 SQVCDKLKI---LRGLCKKIMRSFLRRISWDILTGKKPQAICVDIKICK 77 (78)
T ss_dssp HHHHHHSCS---THHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTTCSC
T ss_pred HHHHhhCch---hHHHHHHHHHHHHHHHHHHHHHCCCHHHHHhccCCCC
Confidence 444455543 7899999999999999999999999999999999994
No 43
>4ddj_A Saposin-A, protein A; saposin fold, sphingolipid activator protein, galactosylcera lauryldimethylamine-N-oxide, lipid, detergent, lysosome; HET: LDA; 1.90A {Homo sapiens} PDB: 2dob_A*
Probab=97.32 E-value=0.00012 Score=58.27 Aligned_cols=41 Identities=37% Similarity=0.694 Sum_probs=38.8
Q ss_pred CcccchhHHHHHHHHHHhhcchhhHHHHHhhhhhccCCCCC
Q 011243 361 SAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSP 401 (490)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (490)
+..|..|+.+|.++|+.|..|.++++|.++++++|.++|.+
T Consensus 3 ~~~C~~C~~~v~~~~~~l~~n~t~~~I~~~l~~~C~~lp~~ 43 (83)
T 4ddj_A 3 SLPCDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKP 43 (83)
T ss_dssp CHHHHHHHHHHHHHHHHHHSTTHHHHHHHHHHHHHTTSCTT
T ss_pred CCcchHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHhCCCc
Confidence 56899999999999999999999999999999999999874
No 44
>2gtg_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid-binding prote binding protein; 2.40A {Homo sapiens} SCOP: a.64.1.1 PDB: 1m12_A 1sn6_A
Probab=97.32 E-value=8.9e-05 Score=59.06 Aligned_cols=37 Identities=43% Similarity=1.006 Sum_probs=35.7
Q ss_pred cchhhhHHHHhhhHHHHHHHHhhcCchhhhccccccc
Q 011243 296 ISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCT 332 (490)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (490)
++++|+.++++|++.|+++|.+..+|+++|..+|+|.
T Consensus 45 ~~~~C~~~V~~y~~~ii~~l~~~~~P~~iC~~l~lC~ 81 (83)
T 2gtg_A 45 LSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCS 81 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTTSCC
T ss_pred chhHHHHHHHHHHHHHHHHHHHCCCHHHHHHhcCCCC
Confidence 6899999999999999999999999999999999995
No 45
>3bqp_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid binding protein, acid ceramidase,farber disease, lipid metabolism; 1.30A {Homo sapiens} PDB: 3bqq_C 2rb3_A 2r1q_A 2r0r_A
Probab=97.31 E-value=0.00011 Score=57.85 Aligned_cols=47 Identities=30% Similarity=0.675 Sum_probs=41.5
Q ss_pred CcccchhHHHHHHHHHHhhcchhhHHHHHhhhhhccCCCCCCCceeeeCC
Q 011243 361 SAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCD 410 (490)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~ 410 (490)
...|..|+++|.++|+.|..|.++++|.++++++|..+|.+ +.-.|.
T Consensus 2 ~~~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~~lp~~---~~~~C~ 48 (80)
T 3bqp_A 2 GGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDP---YQKQCD 48 (80)
T ss_dssp CTTHHHHHHHHHHHHHHSCTTCCHHHHHHHHHHHGGGSCGG---GHHHHH
T ss_pred cCcchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCCCc---cchhhH
Confidence 35799999999999999999999999999999999999873 445665
No 46
>1of9_A Pore-forming peptide ameobapore A; toxin, saplip, amoebapore A; NMR {Entamoeba histolytica} SCOP: a.64.1.4
Probab=97.21 E-value=0.00012 Score=57.66 Aligned_cols=38 Identities=18% Similarity=0.532 Sum_probs=36.0
Q ss_pred cccchhhhHHHHhhhHHHHHHHHhhcCchhhhcccccc
Q 011243 294 GVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLC 331 (490)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (490)
+.+..+|++++++|++.|+++|.+..+|+++|..+++|
T Consensus 40 ~~~~~~C~~~V~~y~~~iI~~l~~~~~P~~IC~~l~lC 77 (77)
T 1of9_A 40 GFIATLCTKVLDFGIDKLIQLIEDKVDANAICAKIHAC 77 (77)
T ss_dssp STTHHHHHHHHHHCHHHHHHHHHHTCCHHHHHHHHSCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcCCC
Confidence 45789999999999999999999999999999999998
No 47
>4ddj_A Saposin-A, protein A; saposin fold, sphingolipid activator protein, galactosylcera lauryldimethylamine-N-oxide, lipid, detergent, lysosome; HET: LDA; 1.90A {Homo sapiens} PDB: 2dob_A*
Probab=97.20 E-value=0.00013 Score=58.11 Aligned_cols=37 Identities=38% Similarity=0.856 Sum_probs=34.8
Q ss_pred cchhhhHHHHhhhHHHHHHHHhhc-Cchhhhccccccc
Q 011243 296 ISQECKTLVDQYGKTILEMLIAET-QPQKICSQMGLCT 332 (490)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 332 (490)
++++|+.++++|++.|+++|.+.+ +|+++|+.+++|.
T Consensus 45 ~~~~C~~~v~~y~~~ii~~l~~~~~~p~~vC~~l~lC~ 82 (83)
T 4ddj_A 45 MSASCKEIVDSYLPVILDIIKGEMSRPGEVCSALNLCE 82 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHTTSCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHccCCHHHHHhHcCCCC
Confidence 589999999999999999999994 9999999999994
No 48
>2qyp_A Proactivator polypeptide; saposin, activator protein, alternative splicing, disease mutation, gaucher disease, glycoprotein, GM2- gangliosidosis; 2.45A {Homo sapiens} SCOP: a.64.1.1 PDB: 2z9a_A
Probab=97.18 E-value=0.00015 Score=58.92 Aligned_cols=48 Identities=25% Similarity=0.637 Sum_probs=42.3
Q ss_pred CCcccchhHHHHHHHHHHhhcchhhHHHHHhhhhhccCCCCCCCceeeeCC
Q 011243 360 DSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCD 410 (490)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~ 410 (490)
+...|..|+++|.++|+.|..|.++++|.+++++.|..+|.. +.-.|.
T Consensus 4 ~~~~C~~C~~vv~~i~~~l~~n~t~~~I~~~l~~~C~~lp~~---~~~~C~ 51 (91)
T 2qyp_A 4 SDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKS---LSEECQ 51 (91)
T ss_dssp CHHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHTSCSS---TTTTHH
T ss_pred CCCcchHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHCCCC---cccchH
Confidence 457899999999999999999999999999999999999874 344665
No 49
>1n69_A Saposin B; lipid binding protein, glycosphingolipid activator protein; HET: PEH; 2.20A {Homo sapiens} SCOP: a.64.1.3
Probab=97.02 E-value=0.00024 Score=56.41 Aligned_cols=37 Identities=30% Similarity=0.825 Sum_probs=32.8
Q ss_pred ccchhhhHHHHhhhHHHHHHHHhhcCchhhhccccccc
Q 011243 295 VISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCT 332 (490)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (490)
.++++|+.++++||+.|+++|. ..+|+++|..+|+|.
T Consensus 44 ~~~~~C~~~V~~y~~~ii~~l~-~~~P~~iC~~lglC~ 80 (81)
T 1n69_A 44 GMADICKNYISQYSEIAIQMMM-HMQPKEICALVGFCD 80 (81)
T ss_dssp THHHHHHHHHHHHHHHHHHHHT-TSCHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-cCCHHHHHhhcCCCC
Confidence 4789999999999997777665 799999999999994
No 50
>1of9_A Pore-forming peptide ameobapore A; toxin, saplip, amoebapore A; NMR {Entamoeba histolytica} SCOP: a.64.1.4
Probab=96.83 E-value=0.00062 Score=53.48 Aligned_cols=40 Identities=23% Similarity=0.554 Sum_probs=37.3
Q ss_pred CcccchhHHHHHHHHHHhhcchhhHHHHHhhhhhccCCCCC
Q 011243 361 SAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSP 401 (490)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (490)
...|..|+.+|..+|+.|..| ++++|.+++++.|..+|..
T Consensus 2 ~~~C~~C~~vv~~ve~~l~~n-t~~~I~~~l~~~C~~lp~~ 41 (77)
T 1of9_A 2 EILCNLCTGLINTLENLLTTK-GADKVKDYISSLCNKASGF 41 (77)
T ss_dssp CSSHHHHHHHHHHHHHHCSSS-CSHHHHHHHHHHHTTCSST
T ss_pred CCcchhHHHHHHHHHHHHHHC-cHHHHHHHHHHHHHcCChH
Confidence 568999999999999999999 9999999999999999754
No 51
>2gtg_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid-binding prote binding protein; 2.40A {Homo sapiens} SCOP: a.64.1.1 PDB: 1m12_A 1sn6_A
Probab=96.76 E-value=0.00084 Score=53.28 Aligned_cols=41 Identities=27% Similarity=0.643 Sum_probs=38.0
Q ss_pred CCcccchhHHHHHHHHHHhhcchhhHHHHHhhhhhccCCCC
Q 011243 360 DSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPS 400 (490)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (490)
+...|..|+.+|..+|+.|..|.++++|.+.++++|..+|.
T Consensus 3 ~~~~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~~lp~ 43 (83)
T 2gtg_A 3 SDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPK 43 (83)
T ss_dssp -CCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTSSCH
T ss_pred CCCcChhHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHCCC
Confidence 45789999999999999999999999999999999998875
No 52
>1l9l_A Granulysin; saposin fold, membrane-lytic, antimicrobial protein; HET: MPO; 0.92A {Homo sapiens} SCOP: a.64.1.1
Probab=96.71 E-value=0.00078 Score=52.53 Aligned_cols=33 Identities=21% Similarity=0.605 Sum_probs=31.1
Q ss_pred cchhhhHHHHhhhHHHHHHHHhhcCchhhhccc
Q 011243 296 ISQECKTLVDQYGKTILEMLIAETQPQKICSQM 328 (490)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (490)
...+|++++++|++.|+++|.+..+|+++|++.
T Consensus 41 ~~~~C~~~V~~y~~~Ii~~L~~~~~P~~IC~~i 73 (74)
T 1l9l_A 41 WRDVCRNFMRRYQSRVIQGLVAGETAQQICEDL 73 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhc
Confidence 678999999999999999999999999999864
No 53
>1l9l_A Granulysin; saposin fold, membrane-lytic, antimicrobial protein; HET: MPO; 0.92A {Homo sapiens} SCOP: a.64.1.1
Probab=96.57 E-value=0.0012 Score=51.53 Aligned_cols=38 Identities=16% Similarity=0.210 Sum_probs=35.8
Q ss_pred cccchhHHHHHHHHHHhhcchhhHHHHHhhhhhccCCCC
Q 011243 362 AMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPS 400 (490)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (490)
..|..|+.+|+.+|+.| +|.|+++|.+.+++.|.++|.
T Consensus 2 ~~C~~C~~~v~~le~~l-~n~Te~~I~~~L~~vC~~l~~ 39 (74)
T 1l9l_A 2 RDYRTCLTIVQKLKKMV-DKPTQRSVSNAATRVCRTGRS 39 (74)
T ss_dssp HHHHHHHHHHHHHHHHC-SSCCHHHHHHHHHHGGGSSCH
T ss_pred CCChHHHHHHHHHHHHh-cccCHHHHHHHHHHHHHhCCh
Confidence 36999999999999999 999999999999999999875
No 54
>1nkl_A NK-lysin; saposin fold, antibacterial peptide, tumourolytic peptide; NMR {Sus scrofa} SCOP: a.64.1.1
Probab=96.36 E-value=0.0013 Score=51.65 Aligned_cols=39 Identities=18% Similarity=0.484 Sum_probs=37.0
Q ss_pred cccchhHHHHHHHHHHhhcchhhHHHHHhhhhhccCCCC
Q 011243 362 AMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPS 400 (490)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (490)
..|..|+.+|+.+|+.|.+|.++++|.+++++.|..+|.
T Consensus 2 ~~C~~C~~iv~~ve~~l~~~~t~~~I~~~l~~~C~~lp~ 40 (78)
T 1nkl_A 2 YFCESCRKIIQKLEDMVGPQPNEDTVTQAASQVCDKLKI 40 (78)
T ss_dssp CHHHHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHSCS
T ss_pred CcchHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHhhCch
Confidence 469999999999999999999999999999999999975
No 55
>3s64_A AC-SLP-1, saposin-like protein 1; lipid-binding, lipid binding protein; HET: CIT EPE; 2.30A {Ancylostoma caninum}
Probab=96.35 E-value=0.0032 Score=50.36 Aligned_cols=52 Identities=23% Similarity=0.357 Sum_probs=43.9
Q ss_pred HHHHHHHHHHh-cCCcccchhhhHHHHhhhHHHHHHHHhhcCchhhhcccccc
Q 011243 280 TTIITQINHAI-GASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLC 331 (490)
Q Consensus 280 ~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (490)
...+++.-+.+ ++.++.+|+|++++++|...|+++|-+..+|+++|+.++.|
T Consensus 35 e~~~d~~Ckk~~~~ip~a~k~C~~~v~~~~d~II~eLe~g~~P~~VC~~L~~C 87 (87)
T 3s64_A 35 EKEFIQGCMTLIGWLPYAEKECKALAKIEMGAIKTLLENGSAPEEICTTLHAC 87 (87)
T ss_dssp HHHHHHHHHHHHCSSTTHHHHHHHHHHHHHHHHHHHHHTTCCTTTHHHHHHCC
T ss_pred HHHHHHHHHHhcccCCchHHHHHHHHHHhHHHHHHHHHcCCCHHHHHHHhccC
Confidence 44455554444 66778899999999999999999999999999999998887
No 56
>1n69_A Saposin B; lipid binding protein, glycosphingolipid activator protein; HET: PEH; 2.20A {Homo sapiens} SCOP: a.64.1.3
Probab=96.09 E-value=0.0032 Score=49.79 Aligned_cols=47 Identities=30% Similarity=0.491 Sum_probs=40.8
Q ss_pred CcccchhHHHHHHHHHHhhcchhh-HHHHHhhhhhccCCCCCCCceeeeCC
Q 011243 361 SAMCSACEMAVIWMQNKLRRNETA-DQILNYVNQLCDRLPSPNGESAVDCD 410 (490)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~c~ 410 (490)
...|..|+.+|..+|+.|+.|.+. .+|.+++++.|.++|.. +.-.|.
T Consensus 3 ~~~C~~C~~~V~~ve~~l~~n~t~~~~I~~~l~~~C~~lp~~---~~~~C~ 50 (81)
T 1n69_A 3 GDVCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPG---MADICK 50 (81)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHGGGGCTT---HHHHHH
T ss_pred CCcchHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHcCcH---HHHHHH
Confidence 457999999999999999999999 99999999999999853 444554
No 57
>2js9_A Saposin-like protein family protein 5; caenopore-5, saposin-like fold, antimicrobial protein; NMR {Caenorhabditis elegans} PDB: 2jsa_A
Probab=95.86 E-value=0.0011 Score=54.80 Aligned_cols=52 Identities=19% Similarity=0.376 Sum_probs=43.5
Q ss_pred CCCcccchhHHHHHHHHHHhhcchhhHHHHHhhhhhccCCCCCCCceeeeCCCC
Q 011243 359 HDSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNL 412 (490)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~ 412 (490)
.+...|..|+.+|+.+|+.| |.++++|.+.|++.|..+|..-..+.-.|..+
T Consensus 19 ~~~~~C~~C~~vV~~ve~~l--n~t~~~I~~~L~~~C~~lp~~ipf~~~~C~~~ 70 (99)
T 2js9_A 19 RSALSCQMCELVVKKYEGSA--DKDANVIKKDFDAECKKLFHTIPFGTRECDHY 70 (99)
T ss_dssp CCSSTHHHHHHHHHHHTTTS--SCCHHHHHHHHHHHHHTGGGGSTTHHHHHHTT
T ss_pred CCCCcchhHHHHHHHHHHHH--HhhHHHHHHHHHHHHHcCCCcchHHHHHHHHH
Confidence 35789999999999999999 88999999999999999985433355577654
No 58
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=89.29 E-value=1.7 Score=38.08 Aligned_cols=27 Identities=15% Similarity=0.090 Sum_probs=23.8
Q ss_pred CeeeecHhhhcceeEEEeCCCCeEEEE
Q 011243 461 PLWILGDVFMGRYHTVFDYGNLSIGFA 487 (490)
Q Consensus 461 ~~~iLG~~fl~~~y~vfD~~~~~igfa 487 (490)
...+||..||+++-.+.|++++++-|.
T Consensus 107 ~d~LLGmD~L~~~~~~ID~~~~~L~l~ 133 (148)
T 3s8i_A 107 MDMLLGLDMLRRHQCSIDLKKNVLVIG 133 (148)
T ss_dssp SSEEECHHHHHHTTCEEETTTTEEECT
T ss_pred cCeeccHHHHHhCCEEEEcCCCEEEEc
Confidence 357999999999999999999998663
No 59
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=89.08 E-value=1.2 Score=38.52 Aligned_cols=26 Identities=15% Similarity=0.118 Sum_probs=23.6
Q ss_pred eeeecHhhhcceeEEEeCCCCeEEEE
Q 011243 462 LWILGDVFMGRYHTVFDYGNLSIGFA 487 (490)
Q Consensus 462 ~~iLG~~fl~~~y~vfD~~~~~igfa 487 (490)
..+||..||+++-+.+|+.++++-|.
T Consensus 109 d~iLG~d~L~~~~~~ID~~~~~l~l~ 134 (148)
T 2i1a_A 109 DVLIGLDMLKRHLACVDLKENVLRIA 134 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEEET
T ss_pred CeEecHHHHhhCCEEEECCCCEEEEc
Confidence 46999999999999999999998763
No 60
>3s64_A AC-SLP-1, saposin-like protein 1; lipid-binding, lipid binding protein; HET: CIT EPE; 2.30A {Ancylostoma caninum}
Probab=51.02 E-value=3.3 Score=32.86 Aligned_cols=37 Identities=27% Similarity=0.430 Sum_probs=31.2
Q ss_pred CCcccchhHHHHHHHHHHhhcchhhHHHHHhhhhhccCC
Q 011243 360 DSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRL 398 (490)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (490)
.+..|..|+.+|+.+|..+.+ +..+|-..+.+.|..+
T Consensus 9 ~~l~C~~C~~~Vk~~e~~i~~--~~~eie~~~d~~Ckk~ 45 (87)
T 3s64_A 9 NVIVCEICKMAVKLIVPEADK--DLDQLEKEFIQGCMTL 45 (87)
T ss_dssp CTTHHHHHHHHHHHHTTCSSC--SSTTHHHHHHHHHHHH
T ss_pred CccchHHHHHHHHHHHHhccC--CHHHHHHHHHHHHHHh
Confidence 456899999999999999875 4447999999999766
No 61
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=24.87 E-value=72 Score=30.71 Aligned_cols=42 Identities=29% Similarity=0.242 Sum_probs=30.9
Q ss_pred ccceEEEeccccceeEEEEceEEEcCeeccccCCCceEEEcCCCCCcccCHH
Q 011243 230 KGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTT 281 (490)
Q Consensus 230 ~G~l~~~p~~~~~~w~V~l~~i~vgg~~i~~~~~~~~aiiDSGtt~~~lp~~ 281 (490)
.|.+...|+..+..|.+ .|.||.++ ..+++|||++.+++|..
T Consensus 3 ~g~v~~~~~~~~~~Y~~---~i~iG~Q~-------~~v~~DTGSs~lWv~~~ 44 (323)
T 1bxo_A 3 SGVATNTPTANDEEYIT---PVTIGGTT-------LNLNFDTGSADLWVFST 44 (323)
T ss_dssp CEEEEEEECGGGSCEEE---EEEETTEE-------EEEEEETTCCCEEECBT
T ss_pred CCceeeeecCCCCEEEE---EEEECCEE-------EEEEEeCCCcceEEecC
Confidence 46677777776666654 46777443 46899999999999974
No 62
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=24.18 E-value=70 Score=30.85 Aligned_cols=41 Identities=17% Similarity=0.114 Sum_probs=29.8
Q ss_pred cceEEEeccccceeEEEEceEEEcCeeccccCCCceEEEcCCCCCcccCHH
Q 011243 231 GEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTT 281 (490)
Q Consensus 231 G~l~~~p~~~~~~w~V~l~~i~vgg~~i~~~~~~~~aiiDSGtt~~~lp~~ 281 (490)
|.+...|+..+..|.++ |.||.++ ..+++|||++.+++|..
T Consensus 3 ~~v~~~~~~~~~~Y~~~---i~iG~Q~-------~~v~~DTGSs~lWv~~~ 43 (325)
T 1ibq_A 3 GSAVTTPQNNDEEYLTP---VTVGKST-------LHLDFDTGSADLWVFSD 43 (325)
T ss_dssp EEEEEEECTTTSCEEEE---EEEBTEE-------EEEEEETTCCCEEEECT
T ss_pred ceEEeEEcCCCCEEEEE---EEECCEE-------EEEEEeCCCccceEeeC
Confidence 56666777666666554 5677443 46899999999999964
No 63
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=22.28 E-value=87 Score=30.14 Aligned_cols=42 Identities=19% Similarity=0.169 Sum_probs=30.3
Q ss_pred ccceEEEeccccceeEEEEceEEEcCeeccccCCCceEEEcCCCCCcccCHH
Q 011243 230 KGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTT 281 (490)
Q Consensus 230 ~G~l~~~p~~~~~~w~V~l~~i~vgg~~i~~~~~~~~aiiDSGtt~~~lp~~ 281 (490)
.|.+...|+.....|.+ .|.||.++ ..+++|||++.+++|..
T Consensus 3 ~~~v~~~~~~~~~~Y~~---~i~iG~q~-------~~v~~DTGSs~lWv~~~ 44 (323)
T 1izd_A 3 TGSVTTNPTSNDEEYIT---QVTVGDDT-------LGLDFDTGSADLWVFSS 44 (323)
T ss_dssp CEEEEEEECGGGCCEEE---EEEETTEE-------EEEEEETTCCCEEECBT
T ss_pred CCceeeeEcCCCCEEEE---EEEECCEE-------EEEEEcCCCcceEEecC
Confidence 35666777766666654 46777433 47899999999999974
Done!