Query 011244
Match_columns 490
No_of_seqs 346 out of 1243
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 04:08:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011244.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011244hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3icu_A E3 ubiquitin-protein li 99.9 4.5E-22 1.5E-26 188.2 19.6 126 42-177 54-185 (194)
2 3iib_A Peptidase M28; YP_92679 99.0 4.4E-09 1.5E-13 111.2 16.1 130 28-177 78-225 (444)
3 2ek8_A Aminopeptidase; metallo 98.9 1.1E-08 3.8E-13 107.2 14.1 102 55-177 90-195 (421)
4 3fed_A Glutamate carboxypeptid 98.6 1.1E-07 3.6E-12 106.0 9.1 107 55-167 124-268 (707)
5 3kas_A Transferrin receptor pr 98.4 6.1E-07 2.1E-11 98.8 8.9 103 55-166 105-230 (640)
6 1apq_A Complement protease C1R 98.3 2E-07 6.9E-12 69.1 2.3 41 411-454 3-52 (53)
7 1lmj_A Fibrillin 1; EGF, calci 98.1 7.8E-07 2.7E-11 72.7 2.0 56 395-453 29-86 (86)
8 3i6s_A Subtilisin-like proteas 98.0 1E-05 3.5E-10 89.4 8.1 95 62-178 261-357 (649)
9 1kli_L Factor VIIA; extrinsic 97.8 5.7E-06 1.9E-10 65.3 2.2 44 411-457 4-49 (69)
10 1y9z_A Alkaline serine proteas 97.8 5.1E-05 1.7E-09 79.8 9.0 77 86-174 270-355 (441)
11 2jkh_L Factor X light chain; p 97.8 9.2E-06 3.1E-10 61.0 2.3 42 413-457 2-44 (55)
12 2kl7_A Fibulin-4; secreted, ca 97.7 8.8E-06 3E-10 64.5 1.3 27 411-438 2-29 (71)
13 1xf1_A C5A peptidase, SCP; hyd 97.7 0.0001 3.4E-09 84.6 10.2 65 87-163 278-343 (926)
14 2w2n_E LDL receptor, low-densi 97.5 1E-05 3.4E-10 69.1 -0.5 52 395-452 54-106 (107)
15 1uzk_A Fibrillin-1; glycoprote 97.5 3.6E-05 1.2E-09 69.8 3.1 60 390-453 99-162 (162)
16 1z6c_A Vitamin K-dependent pro 97.5 3.3E-05 1.1E-09 63.1 2.2 55 395-455 29-86 (87)
17 1emn_A Fibrillin; extracellula 97.4 5.4E-05 1.8E-09 61.2 2.7 43 406-454 1-43 (82)
18 1gl4_A Nidogen-1, entactin; im 97.4 5.9E-05 2E-09 74.9 3.3 42 411-455 4-46 (285)
19 3v65_B Low-density lipoprotein 97.3 6.2E-05 2.1E-09 77.3 2.4 58 394-456 27-85 (386)
20 1uzk_A Fibrillin-1; glycoprote 97.3 8.2E-05 2.8E-09 67.4 2.9 43 411-455 2-44 (162)
21 1dx5_I Thrombomodulin; serine 97.3 6.3E-05 2.2E-09 64.9 1.9 52 395-452 65-118 (118)
22 1z6c_A Vitamin K-dependent pro 97.3 7.8E-05 2.7E-09 60.8 1.8 43 411-454 2-44 (87)
23 2w86_A Fibrillin-1, fibrillin1 97.3 8.8E-05 3E-09 66.1 2.3 55 394-453 91-147 (147)
24 3p5b_L Low density lipoprotein 97.2 6.5E-05 2.2E-09 77.6 1.3 56 395-456 25-81 (400)
25 1emn_A Fibrillin; extracellula 97.1 0.00015 5E-09 58.6 2.1 52 395-453 30-82 (82)
26 1kig_L Factor XA; glycoprotein 97.0 0.00019 6.5E-09 53.0 1.5 31 427-457 11-41 (51)
27 1lmj_A Fibrillin 1; EGF, calci 97.0 0.00025 8.6E-09 57.6 2.4 42 411-454 2-45 (86)
28 1nzi_A Complement C1S componen 97.0 0.00025 8.5E-09 63.6 2.2 43 411-454 116-158 (159)
29 1szb_A Mannose binding lectin- 97.0 0.00023 7.7E-09 64.9 1.9 44 411-455 123-168 (170)
30 1edm_B Factor IX; epidermal gr 97.0 0.00028 9.7E-09 48.7 1.9 32 411-444 2-33 (39)
31 3v64_C Agrin; beta propeller, 97.0 0.00028 9.7E-09 71.3 2.7 43 412-457 1-43 (349)
32 2bou_A EGF-like module contain 96.9 0.00036 1.2E-08 61.7 2.8 49 404-455 90-139 (143)
33 2k2s_B Micronemal protein 6; m 96.9 0.00062 2.1E-08 52.3 3.7 44 411-456 10-58 (61)
34 2w86_A Fibrillin-1, fibrillin1 96.8 0.00054 1.9E-08 60.9 2.7 42 411-455 3-44 (147)
35 2bz6_L Blood coagulation facto 96.6 0.0008 2.8E-08 50.0 2.3 31 427-457 12-43 (53)
36 1n7d_A LDL receptor, low-densi 96.6 0.00088 3E-08 74.3 3.4 55 395-455 319-374 (699)
37 2wph_E Coagulation factor IXA 96.5 0.0013 4.5E-08 50.0 3.0 31 427-457 12-43 (59)
38 2w2n_E LDL receptor, low-densi 96.5 0.0015 5E-08 55.5 3.6 40 411-454 28-68 (107)
39 1x7a_L Coagulation factor IX, 96.4 0.00098 3.3E-08 59.7 2.0 54 395-456 73-128 (146)
40 3v65_B Low-density lipoprotein 96.4 0.00052 1.8E-08 70.4 0.0 42 411-454 2-43 (386)
41 2bou_A EGF-like module contain 96.4 0.0016 5.5E-08 57.5 3.0 40 404-446 38-79 (143)
42 3m0c_C LDL receptor, low-densi 96.3 0.00082 2.8E-08 75.8 0.9 56 395-456 337-393 (791)
43 3f1s_B Vitamin K-dependent pro 96.0 0.0018 6.2E-08 63.6 1.5 41 411-454 1-43 (283)
44 1aut_L Activated protein C; se 96.0 0.0029 1E-07 53.9 2.6 48 407-457 48-97 (114)
45 1nfu_B Coagulation factor XA, 96.0 0.0027 9.3E-08 59.8 2.5 56 394-456 66-123 (195)
46 3h5c_B Vitamin K-dependent pro 95.8 0.0031 1E-07 62.8 2.3 53 395-455 30-85 (317)
47 2vh0_B Activated factor XA lig 95.7 0.004 1.4E-07 54.7 2.5 57 394-457 66-124 (134)
48 3p5b_L Low density lipoprotein 95.6 0.0041 1.4E-07 64.1 2.3 39 413-454 1-39 (400)
49 1egf_A Epidermal growth factor 95.6 0.0041 1.4E-07 46.0 1.7 33 411-444 2-38 (53)
50 2vj3_A Neurogenic locus notch 95.6 0.0047 1.6E-07 54.0 2.3 33 411-444 4-37 (135)
51 1x7a_L Coagulation factor IX, 95.3 0.005 1.7E-07 55.0 1.7 36 405-444 43-78 (146)
52 3gha_A Disulfide bond formatio 95.2 0.046 1.6E-06 51.0 7.9 99 284-394 87-187 (202)
53 3bci_A Disulfide bond protein 95.1 0.37 1.3E-05 43.5 13.5 100 284-395 69-174 (186)
54 1aut_L Activated protein C; se 94.9 0.0065 2.2E-07 51.7 1.1 34 411-444 5-44 (114)
55 1yo8_A Thrombospondin-2; EGF, 94.9 0.015 5.1E-07 63.9 4.0 47 394-445 29-81 (634)
56 2c4f_L Coagulation factor VII 94.9 0.01 3.6E-07 52.5 2.3 32 411-444 46-77 (142)
57 1nfu_B Coagulation factor XA, 94.8 0.0052 1.8E-07 57.8 0.0 35 406-444 38-72 (195)
58 1dx5_I Thrombomodulin; serine 94.5 0.016 5.6E-07 49.6 2.5 32 411-446 3-35 (118)
59 2vh0_B Activated factor XA lig 94.3 0.0079 2.7E-07 52.8 0.0 35 406-444 38-72 (134)
60 3u7u_G Neuregulin 1; signaling 94.0 0.019 6.4E-07 43.0 1.7 33 411-445 7-44 (55)
61 1ijq_A LDL receptor, low-densi 94.0 0.022 7.5E-07 56.2 2.6 43 411-454 266-316 (316)
62 3gyk_A 27KDA outer membrane pr 93.6 0.093 3.2E-06 46.8 5.9 86 298-394 83-168 (175)
63 4a0p_A LRP6, LRP-6, low-densit 92.9 0.037 1.3E-06 60.6 2.4 42 411-455 264-307 (628)
64 4d90_A EGF-like repeat and dis 92.7 0.038 1.3E-06 48.2 1.8 39 404-445 90-128 (143)
65 2c4f_L Coagulation factor VII 92.6 0.056 1.9E-06 47.7 2.7 55 395-457 72-132 (142)
66 3gmf_A Protein-disulfide isome 92.2 0.073 2.5E-06 50.0 3.1 67 322-394 126-192 (205)
67 1yo8_A Thrombospondin-2; EGF, 92.1 0.053 1.8E-06 59.6 2.3 45 404-453 96-145 (634)
68 1z1y_A Ookinete surface protei 91.6 0.065 2.2E-06 49.1 1.9 57 395-454 120-179 (186)
69 3s94_A LRP-6, low-density lipo 90.6 0.11 3.6E-06 56.8 2.8 41 411-454 577-618 (619)
70 3h5c_B Vitamin K-dependent pro 90.4 0.079 2.7E-06 52.4 1.4 32 411-444 4-35 (317)
71 2vj3_A Neurogenic locus notch 90.2 0.11 3.7E-06 45.2 1.9 43 395-444 32-75 (135)
72 1n7d_A LDL receptor, low-densi 90.1 0.089 3E-06 58.2 1.6 40 411-453 293-332 (699)
73 3m0c_C LDL receptor, low-densi 90.0 0.12 4.2E-06 58.2 2.6 41 411-454 311-351 (791)
74 1z1y_A Ookinete surface protei 89.8 0.13 4.3E-06 47.1 2.2 53 395-454 78-136 (186)
75 2imf_A HCCA isomerase, 2-hydro 89.7 0.23 7.8E-06 45.7 3.9 67 321-394 125-191 (203)
76 3hz8_A Thiol:disulfide interch 89.7 0.22 7.4E-06 45.8 3.7 65 319-390 109-174 (193)
77 1tpg_A T-plasminogen activator 88.9 0.12 4.1E-06 42.1 1.2 42 406-453 42-85 (91)
78 3vta_A Cucumisin; subtilisin-l 88.8 0.48 1.6E-05 51.7 6.2 63 87-168 279-341 (621)
79 1k36_A Epiregulin; EGF-like fo 88.8 0.13 4.5E-06 36.7 1.2 32 411-444 2-37 (46)
80 3fz5_A Possible 2-hydroxychrom 88.6 0.27 9.2E-06 45.5 3.5 92 298-396 107-199 (202)
81 3sov_A LRP-6, low-density lipo 88.6 0.19 6.5E-06 49.9 2.6 42 412-456 267-311 (318)
82 2vj2_A Jagged-1; signalling, p 88.3 0.23 7.8E-06 45.0 2.7 38 405-444 125-163 (169)
83 3f4s_A Alpha-DSBA1, putative u 87.7 0.27 9.2E-06 46.7 3.0 83 298-386 103-190 (226)
84 2rem_A Disulfide oxidoreductas 87.6 0.3 1E-05 44.0 3.1 64 319-390 111-175 (193)
85 4dvc_A Thiol:disulfide interch 87.6 0.26 9E-06 43.7 2.6 55 319-380 106-160 (184)
86 1hae_A Heregulin-alpha; growth 87.3 0.33 1.1E-05 36.7 2.6 31 412-444 6-41 (63)
87 3h93_A Thiol:disulfide interch 86.4 0.36 1.2E-05 43.6 3.0 86 298-390 86-175 (192)
88 4d90_A EGF-like repeat and dis 85.8 0.25 8.7E-06 42.8 1.5 32 411-444 51-89 (143)
89 3gl5_A Putative DSBA oxidoredu 85.6 0.73 2.5E-05 43.9 4.7 92 298-396 115-210 (239)
90 1a3p_A Epidermal growth factor 85.1 0.4 1.4E-05 33.7 2.0 24 420-444 10-35 (45)
91 2znm_A Thiol:disulfide interch 84.8 0.52 1.8E-05 42.5 3.1 62 321-389 107-170 (195)
92 3hd5_A Thiol:disulfide interch 83.6 0.9 3.1E-05 41.1 4.2 59 319-384 107-165 (195)
93 1nt0_A MAsp2, mannose-binding 83.0 0.4 1.4E-05 46.8 1.7 28 427-454 136-163 (286)
94 3l9v_A Putative thiol-disulfid 80.5 1.6 5.6E-05 39.6 4.7 56 319-381 100-156 (189)
95 3dem_A Complement factor MAsp- 79.3 0.7 2.4E-05 44.6 1.9 29 427-455 137-165 (278)
96 3l9s_A Thiol:disulfide interch 78.9 1 3.5E-05 41.3 2.8 57 319-382 107-163 (191)
97 2in3_A Hypothetical protein; D 78.2 1.6 5.5E-05 39.9 3.9 90 298-394 110-205 (216)
98 1g1s_A P-selectin; selectin, l 77.6 0.46 1.6E-05 42.0 -0.0 25 420-445 126-150 (162)
99 1q4g_A Prostaglandin G/H synth 76.5 1.1 3.6E-05 48.5 2.4 37 412-454 2-40 (553)
100 1tpg_A T-plasminogen activator 75.4 0.66 2.3E-05 37.6 0.4 28 411-446 16-43 (91)
101 3s94_A LRP-6, low-density lipo 74.9 1.3 4.3E-05 48.3 2.5 40 412-454 272-314 (619)
102 3v64_C Agrin; beta propeller, 74.2 1.8 6.2E-05 43.1 3.3 29 427-456 317-345 (349)
103 3c7m_A Thiol:disulfide interch 73.9 1.3 4.4E-05 39.7 1.9 59 326-391 125-186 (195)
104 3feu_A Putative lipoprotein; a 72.8 2.1 7.2E-05 38.8 3.2 66 319-392 108-177 (185)
105 1un2_A DSBA, thiol-disulfide i 70.5 3 0.0001 38.4 3.7 55 322-383 9-63 (197)
106 1r4w_A Glutathione S-transfera 70.3 5.3 0.00018 37.1 5.4 95 298-399 113-215 (226)
107 3kzq_A Putative uncharacterize 67.8 3 0.0001 38.2 3.1 73 299-378 104-177 (208)
108 3nt1_A Prostaglandin-endoperox 63.4 2.4 8.1E-05 46.1 1.6 37 412-454 1-39 (587)
109 1dme_A CD6 metallothionein-1; 62.0 3.3 0.00011 26.2 1.4 24 403-428 1-27 (28)
110 1nql_B Epidermal growth factor 59.4 2.9 0.0001 30.5 1.0 21 425-445 17-39 (53)
111 3rpp_A Glutathione S-transfera 55.8 11 0.00037 35.5 4.6 77 319-399 135-215 (234)
112 1g1t_A E-selectin; EGF, adhesi 54.4 2.2 7.6E-05 37.1 -0.5 19 426-444 131-149 (157)
113 1z6m_A Conserved hypothetical 54.0 11 0.00039 32.8 4.2 27 367-393 146-172 (175)
114 3kp8_A Vkorc1/thioredoxin doma 52.5 7.3 0.00025 31.8 2.5 28 367-394 63-90 (106)
115 3asi_A Neurexin-1-alpha; beta- 50.9 5.5 0.00019 40.6 1.7 29 413-443 186-215 (410)
116 3gn3_A Putative protein-disulf 48.7 16 0.00055 33.0 4.4 53 321-383 115-167 (182)
117 4aqb_A Mannan-binding lectin s 48.3 8.4 0.00029 38.4 2.6 43 411-454 120-164 (361)
118 3cfw_A L-selectin; EGF, cell a 46.9 7.5 0.00026 34.0 1.8 21 425-445 130-150 (164)
119 3ca7_A Protein spitz; argos, E 46.4 8.2 0.00028 27.7 1.6 24 420-444 15-42 (52)
120 1fo5_A Thioredoxin; disulfide 40.5 16 0.00054 27.2 2.5 29 366-394 52-81 (85)
121 4f87_A Plycb; lysin, bacteriop 39.5 16 0.00053 27.2 2.2 21 146-166 51-71 (72)
122 1nho_A Probable thioredoxin; b 38.7 17 0.00057 27.0 2.4 28 367-394 52-80 (85)
123 4b2v_A S64; toxin, ICK; NMR {S 34.0 17 0.00058 23.1 1.4 15 250-265 1-15 (32)
124 1ob1_C Major merozoite surface 33.4 25 0.00085 29.2 2.7 34 420-456 11-45 (99)
125 4fbr_A Lectin, myxobacterial h 30.1 6.2 0.00021 38.6 -1.8 34 411-446 98-131 (267)
126 4a0p_A LRP6, LRP-6, low-densit 27.7 29 0.00099 37.5 2.8 29 427-455 592-621 (628)
127 1ilo_A Conserved hypothetical 26.7 27 0.00094 25.4 1.8 27 368-394 48-76 (77)
128 1n1i_A Merozoite surface prote 26.3 35 0.0012 28.6 2.4 34 420-456 17-51 (105)
129 3gv1_A Disulfide interchange p 26.2 47 0.0016 28.9 3.4 31 366-396 105-136 (147)
130 3ltf_D Protein spitz; receptor 23.6 37 0.0013 25.0 1.9 24 420-444 15-42 (58)
131 3qmx_A Glutaredoxin A, glutare 22.5 1.1E+02 0.0038 24.3 4.8 48 323-384 33-81 (99)
132 2l8s_A Integrin alpha-1; trans 22.4 26 0.00088 25.9 0.8 25 461-485 8-32 (54)
133 2yan_A Glutaredoxin-3; oxidore 21.6 1.2E+02 0.004 24.0 4.8 49 322-384 38-86 (105)
134 3ipz_A Monothiol glutaredoxin- 21.1 1.1E+02 0.0039 24.6 4.7 49 322-384 39-87 (109)
135 2knc_A Integrin alpha-IIB; tra 20.9 29 0.00099 25.6 0.8 25 461-485 11-35 (54)
136 3qcw_A Neurexin-1-alpha; synap 20.7 50 0.0017 38.7 3.2 37 406-444 613-650 (1245)
137 1t1v_A SH3BGRL3, SH3 domain-bi 20.4 1.4E+02 0.0048 23.0 5.0 51 322-384 24-74 (93)
138 3kp9_A Vkorc1/thioredoxin doma 20.3 53 0.0018 32.2 2.8 28 367-394 248-275 (291)
No 1
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=99.89 E-value=4.5e-22 Score=188.22 Aligned_cols=126 Identities=21% Similarity=0.309 Sum_probs=103.6
Q ss_pred eeeeecccCCCCCCCceEEEEeccC--CCccCCCCCCCCCcccc-CCCCCCCeEEEEecCC-CCHHHHHHHHHhcCCcEE
Q 011244 42 YECAIGNFGVPQYGGTLIGTVVYPK--ANQKACKGFDEVDLSFK-SRPGGLPTFLLVDRGD-CYFTLKAWNAQKGGAAAI 117 (490)
Q Consensus 42 y~~~~A~FG~~~yg~~l~G~lv~~~--~~~~gC~~~~~~~~~~~-~~~~~~g~IvLV~RG~-CsF~~Kv~nAQ~aGA~aV 117 (490)
.....|+||.+.+.+.++|.|+++. ++.+||++++++..+.. ..+..+++|+||+||+ |+|.+|++|||++||+||
T Consensus 54 ~~~e~a~FG~~~p~~~v~G~lv~~~~~~~~~GC~~~~~~~~~~~~~~~~~~gkIaLV~RG~~CsF~~Kv~nAq~aGA~av 133 (194)
T 3icu_A 54 ELSEEGVYGQDSPLEPVAGVLVPPDGPGALNACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFADKIHLAYERGASGA 133 (194)
T ss_dssp EEEEEEEECTTSCCSCEEEEEECBSSTTCTTCCSTTCCBCCCBCTTSSCBCCEEEEEESCTTCCHHHHHHHHHHTTCSEE
T ss_pred ecccccccCCCCCCCCcEEEEEecCCCCCcCCCCCCccccCCcccccccCCCeEEEEECCCCcCHHHHHHHHHHCCCcEE
Confidence 5566899999999999999999876 47899999876531111 0112468999999999 999999999999999999
Q ss_pred EEEeCCC--CCceecCCCCCccccccccCCcceeEEEEehhhHHHHHHHHhCCCeEEEEEEe
Q 011244 118 LVADDKT--EPLITMDTPEEENADAEYLQNITIPSALISKSLGDSIKKSLSGGEMVNMNLDW 177 (490)
Q Consensus 118 II~nn~~--~~l~tM~~p~d~~~~~~~~~~i~IPsv~Isk~~G~~L~~~l~~g~~V~v~l~~ 177 (490)
|||||.. +.+++|..++ ..+||++||++++|+.|+++|++|.+|+++|..
T Consensus 134 IIyNn~~~g~~~~~m~~~~----------~~~IPsv~Is~~~G~~L~~~L~~G~~Vtvti~v 185 (194)
T 3icu_A 134 VIFNFPGTRNEVIPMSHPG----------AVDIVAIMIGNLKGTKILQSIQRGIQVTMVIEV 185 (194)
T ss_dssp EEECCTTCTTCCCCCCCTT----------CCSSEEEEECHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred EEEeCCCCCCceeeecCCC----------CCceeEEEECHHHHHHHHHHHHCCCeEEEEEEC
Confidence 9999852 3567886332 357999999999999999999999999998876
No 2
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=99.00 E-value=4.4e-09 Score=111.16 Aligned_cols=130 Identities=17% Similarity=0.079 Sum_probs=87.8
Q ss_pred ceEEEEccccccceeeeeecccCCCCCCCceEEEEeccCCCccCCCCCCCCCccccCCCCCCCeEEEEecCCCC------
Q 011244 28 NSLKVTSPEKIKGVYECAIGNFGVPQYGGTLIGTVVYPKANQKACKGFDEVDLSFKSRPGGLPTFLLVDRGDCY------ 101 (490)
Q Consensus 28 ~~l~V~~P~~l~g~y~~~~A~FG~~~yg~~l~G~lv~~~~~~~gC~~~~~~~~~~~~~~~~~g~IvLV~RG~Cs------ 101 (490)
.+++++.|.. ..+......+++....+.++|+||+.. +...|+.... ..++|+||||+||.|.
T Consensus 78 ~~~~~~~~~~--~~~~~~~l~~s~~tp~~~vta~lV~v~-~~~~~~~~~~--------~dvkGKIVlv~~~~~~~~~~~~ 146 (444)
T 3iib_A 78 AKASILSPFP--QPLVVTALGGSIATPAQGLSATIVRFD-TLQDLQNAEA--------GSLNDKIAFIDAKTERHRDGKG 146 (444)
T ss_dssp EEEEEEESSC--EEECEEECBTCCCCCTTCEEEEEEEES-SHHHHHTSCT--------TTTTTCEEEECCCCCCCTTCHH
T ss_pred eEEEEeCCCC--ceEEEEeccCCCCCCCCCeEEEEEecC-CHHHHhhccc--------cccCccEEEEeCCCCCCccccc
Confidence 3455665532 233333333443333567999999864 2333443311 3578999999999995
Q ss_pred ---HHHHH----HHHHhcCCcEEEEEeCCCCCc---e--ecCCCCCccccccccCCcceeEEEEehhhHHHHHHHHhCCC
Q 011244 102 ---FTLKA----WNAQKGGAAAILVADDKTEPL---I--TMDTPEEENADAEYLQNITIPSALISKSLGDSIKKSLSGGE 169 (490)
Q Consensus 102 ---F~~Kv----~nAQ~aGA~aVII~nn~~~~l---~--tM~~p~d~~~~~~~~~~i~IPsv~Isk~~G~~L~~~l~~g~ 169 (490)
|..|. .+|+++||+||||+++..... . +|..+ .....||++.|++++|+.|+++++.|+
T Consensus 147 y~~~~~kr~~~a~~A~~aGA~avIi~~~~~~~~~~~~tg~~~~~---------~~~~~IP~~~Is~~da~~L~~~l~~g~ 217 (444)
T 3iib_A 147 YGQTASGRSRGAVAAAEKGAVGIIIRSIGTDHDRMAHTGMMRYE---------EGVTAIPAAAISNPDADLINAMLKRDK 217 (444)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEECSCSCCSSCCCCCBCCCC---------TTSCCCCEEEECHHHHHHHHHHHTTTC
T ss_pred ccchhhhhhhHHHHHHHCCCeEEEEEccCCcccccccCCccccC---------CCCCCCCeEEecHHHHHHHHHHHhCCC
Confidence 77774 579999999999998754321 1 12111 124789999999999999999999888
Q ss_pred eEEEEEEe
Q 011244 170 MVNMNLDW 177 (490)
Q Consensus 170 ~V~v~l~~ 177 (490)
.+.+++..
T Consensus 218 ~~~v~l~~ 225 (444)
T 3iib_A 218 EVVISLEL 225 (444)
T ss_dssp CCEEEEEE
T ss_pred CeEEEEEE
Confidence 77777765
No 3
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=98.90 E-value=1.1e-08 Score=107.19 Aligned_cols=102 Identities=21% Similarity=0.250 Sum_probs=74.5
Q ss_pred CCceEEEEeccCCCccCCCCCCCCCccccCCCCCCCeEEEEecCCCCHHHHHHHHHhcCCcEEEEEeCCCCCce-ecCCC
Q 011244 55 GGTLIGTVVYPKANQKACKGFDEVDLSFKSRPGGLPTFLLVDRGDCYFTLKAWNAQKGGAAAILVADDKTEPLI-TMDTP 133 (490)
Q Consensus 55 g~~l~G~lv~~~~~~~gC~~~~~~~~~~~~~~~~~g~IvLV~RG~CsF~~Kv~nAQ~aGA~aVII~nn~~~~l~-tM~~p 133 (490)
.+.++|+|++.. .| .+.+ |.. -+++|+||||+||+|+|..|+.+|+++||+||||+++.+.+.. +|+
T Consensus 90 ~g~v~a~lv~~~---~G-~~~D-----~~~-~dv~GkIvlv~~g~~~~~~k~~~A~~~GA~gvIi~~~~~~~~~g~~~-- 157 (421)
T 2ek8_A 90 NSDVTAELVYVG---LG-TTAD-----VAG-KDLNGKIALIQRGNISFADKVRNAAKQGAKAVIIYNNTDGKLNGTLG-- 157 (421)
T ss_dssp CEEEEEEEEECT---TC-CTTT-----TTT-SCCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSSSCCCCBCS--
T ss_pred CCCcceEEEECC---CC-Chhh-----cCC-CCcCceEEEEeCCCCCHHHHHHHHHHCCCeEEEEEeCCCcccccccC--
Confidence 357899998742 23 2222 211 2578999999999999999999999999999999998644322 221
Q ss_pred CCccccccccCCcceeEEEEehhhHHHHHHHH---hCCCeEEEEEEe
Q 011244 134 EEENADAEYLQNITIPSALISKSLGDSIKKSL---SGGEMVNMNLDW 177 (490)
Q Consensus 134 ~d~~~~~~~~~~i~IPsv~Isk~~G~~L~~~l---~~g~~V~v~l~~ 177 (490)
+ .....||++.|++++++.|++.+ +.| ++.+++..
T Consensus 158 -~-------~~~~~IP~~~Is~~~a~~L~~~l~~~~~g-~~~v~l~~ 195 (421)
T 2ek8_A 158 -G-------SDASFVAAVGITKQEGDALAANLRAGEKI-TATVKVAG 195 (421)
T ss_dssp -S-------CCTTCCEEEEECHHHHHHHHHHHHTTCCC-EEEEEEES
T ss_pred -C-------CCCCCccEEEeCHHHHHHHHHHhhhhccC-Cccccccc
Confidence 1 13578999999999999999999 444 45555554
No 4
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=98.56 E-value=1.1e-07 Score=105.97 Aligned_cols=107 Identities=19% Similarity=0.227 Sum_probs=70.6
Q ss_pred CCceEEEEeccCCCccCCCCCCCCCccccC--CCCCCCeEEEEecCCCCHHHHHHHHHhcCCcEEEEEeCCCC-------
Q 011244 55 GGTLIGTVVYPKANQKACKGFDEVDLSFKS--RPGGLPTFLLVDRGDCYFTLKAWNAQKGGAAAILVADDKTE------- 125 (490)
Q Consensus 55 g~~l~G~lv~~~~~~~gC~~~~~~~~~~~~--~~~~~g~IvLV~RG~CsF~~Kv~nAQ~aGA~aVII~nn~~~------- 125 (490)
.++++|.|||+ +.||.. +.. .+.. ..+++|+||||+||.|+|..|+.|||++||+|||||++..+
T Consensus 124 ~G~v~g~lV~v---~~G~~~-Df~--~L~~~~~~~v~GkIvlv~~G~~~~~~Kv~~A~~~GA~gviiy~dp~d~~~~g~~ 197 (707)
T 3fed_A 124 QGMPEGDLVYV---NYARTE-DFF--KLEREMGINCTGKIVIARYGKIFRGNKVKNAMLAGAIGIILYSDPADYFAPEVQ 197 (707)
T ss_dssp CBCCEECEEEC---TTCCHH-HHH--HHHHTSCCCCTTCEEEEECCSSCHHHHHHHHHHTTCSEEEEECCHHHHCCTTCC
T ss_pred CCceEEEEEEe---cCCchh-hHH--HHHhccCCCCCCeEEEEECCCCCHhHHHHHHHHCCCEEEEEEcCchhccccccc
Confidence 45799999986 356621 110 0110 13578999999999999999999999999999999986310
Q ss_pred ----------------CceecCCCCCc-cc----c--------ccccCCcceeEEEEehhhHHHHHHHHhC
Q 011244 126 ----------------PLITMDTPEEE-NA----D--------AEYLQNITIPSALISKSLGDSIKKSLSG 167 (490)
Q Consensus 126 ----------------~l~tM~~p~d~-~~----~--------~~~~~~i~IPsv~Isk~~G~~L~~~l~~ 167 (490)
.+..+..|+|. ++ . .+.....+||++-|++.+|+.|++.|..
T Consensus 198 ~yP~~~~~p~~~vqrGsv~~~~~~GDp~TPG~ps~~~~~r~~~~~~~~~p~IP~~pIS~~da~~Ll~~l~g 268 (707)
T 3fed_A 198 PYPKGWNLPGTAAQRGNVLNLNGAGDPLTPGYPAKEYTFRLDVEEGVGIPRIPVHPIGYNDAEILLRYLGG 268 (707)
T ss_dssp BTTTSSBCCTTCCCCCCCCCCTTCCSTTCTTSCCCTTCCCCCGGGCTTCCSSCEEEECHHHHHHHHHTBCB
T ss_pred cCCCCccCCCccccccceecccCCCCCCCCCCcccCCCcccChhhccCCCCCCeEecCHHHHHHHHHHhcC
Confidence 00000011210 00 0 0001246899999999999999998864
No 5
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=98.36 E-value=6.1e-07 Score=98.84 Aligned_cols=103 Identities=18% Similarity=0.217 Sum_probs=69.0
Q ss_pred CCceEEEEeccCCCccCCCCCCCCCccccCCCCCCCeEEEEecCCCCHHHHHHHHHhcCCcEEEEEeCCCCC-ce-----
Q 011244 55 GGTLIGTVVYPKANQKACKGFDEVDLSFKSRPGGLPTFLLVDRGDCYFTLKAWNAQKGGAAAILVADDKTEP-LI----- 128 (490)
Q Consensus 55 g~~l~G~lv~~~~~~~gC~~~~~~~~~~~~~~~~~g~IvLV~RG~CsF~~Kv~nAQ~aGA~aVII~nn~~~~-l~----- 128 (490)
.+.++|+||++ ..|+.. +.. .++ -+++|+||||+||+|+|..|+.+|+++||+||||+++..+. ..
T Consensus 105 ~g~v~g~lV~v---g~G~~~-D~~--~l~--vdv~GkIvlv~~g~~~~~~K~~~A~~~GA~gvii~~~~~~~~~~~~~~~ 176 (640)
T 3kas_A 105 AATVTGKLVHA---NFGTKK-DFE--DLY--TPVNGSIVIVRAGKITFAEKVANAESLNAIGVLIYMDQTKFPIVNAELS 176 (640)
T ss_dssp CEEEEECEEEC---TTCCHH-HHH--TCS--SCCTTSEEEEESCSSCHHHHHHHHHTTTCSEEEEECCTTTCCCSCTTCC
T ss_pred CCceEEEEEEe---cCCChh-hHH--Hhh--cccCCcEEEEecCCCCHHHHHHHHHHCCCeEEEEEeccccccccccccc
Confidence 35689999986 355532 111 111 25789999999999999999999999999999999976321 10
Q ss_pred -----ecCCCCCc-c----c--c-----ccccCCcceeEEEEehhhHHHHHHHHh
Q 011244 129 -----TMDTPEEE-N----A--D-----AEYLQNITIPSALISKSLGDSIKKSLS 166 (490)
Q Consensus 129 -----tM~~p~d~-~----~--~-----~~~~~~i~IPsv~Isk~~G~~L~~~l~ 166 (490)
.+. ++|. + + . ........||++-|++++|+.|.+.+.
T Consensus 177 ~~G~~~~~-~Gdp~tpg~ps~~~~~~~~~~~~~~p~IP~~~Is~~~a~~Ll~~l~ 230 (640)
T 3kas_A 177 FFGHAHLG-TGDPYTPGFPSFNHTQFPPSRSSGLPNIPVQTISRAAAEKLFGNME 230 (640)
T ss_dssp CCEECCSS-SSCSCCCSSCC---CCCCCCSSCCCCSSCEEECCHHHHHHHHTTEE
T ss_pred cccccccC-CCCCCCCCcccccccccccccccCCCCCCEEecCHHHHHHHHHHcc
Confidence 000 1110 0 0 0 000123589999999999999998764
No 6
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=98.31 E-value=2e-07 Score=69.06 Aligned_cols=41 Identities=34% Similarity=0.852 Sum_probs=35.5
Q ss_pred chhhHhhh---------ccCCCCCCceecCCCceeeeeCCCccceecCCeeee
Q 011244 411 DVDECEEK---------LACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCIS 454 (490)
Q Consensus 411 didEc~~~---------~~c~c~~~~c~nt~g~y~C~C~~~~~~~~~~~tC~~ 454 (490)
|||||... ..|+ . .|.||.|||+|.|+.||.+..++.+|.+
T Consensus 3 DidEC~~~~~~~~~~~~~~C~--~-~C~n~~Gsy~C~C~~Gy~~~~d~~~C~~ 52 (53)
T 1apq_A 3 DLDECASRSKSGEEDPQPQCQ--H-LCHNYVGGYFCSCRPGYELQEDRHSCQA 52 (53)
T ss_dssp SCCTTTCSTTTCCCSSSCTTS--S-EEEEETTEEEEECSTTCEECTTSSCEEC
T ss_pred ccccccCcccccccccCCCCC--C-EeECCCCCeEEECCCCCeECCCCCccCC
Confidence 89999873 3454 3 8999999999999999999999999975
No 7
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=98.11 E-value=7.8e-07 Score=72.69 Aligned_cols=56 Identities=32% Similarity=0.783 Sum_probs=44.7
Q ss_pred hc-CCCCC-CCCCccCCcchhhHhhhccCCCCCCceecCCCceeeeeCCCccceecCCeee
Q 011244 395 CA-GFQET-TEPAICLSEDVDECEEKLACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCI 453 (490)
Q Consensus 395 C~-gf~~~-~~p~~C~~~didEc~~~~~c~c~~~~c~nt~g~y~C~C~~~~~~~~~~~tC~ 453 (490)
|. ||... .....|. |||||... ++.|....|+||.|+|+|.|+.||.+..+.++||
T Consensus 29 C~~Gy~~~~~~g~~C~--dideC~~~-~~~C~~~~C~n~~g~y~C~C~~G~~~~~~~~~Ci 86 (86)
T 1lmj_A 29 CDEGYESGFMMMKNCM--DIDECQRD-PLLCRGGVCHNTEGSYRCECPPGHQLSPNISACI 86 (86)
T ss_dssp CCSSEEECTTTSSSEE--ECCHHHHC-SSTTTTSEEEEETTEEEEESCTTSCCCSSSCCCC
T ss_pred CCCCcCccCCCCCccC--CcccccCC-CCcCCCCEeEcCCCCEEEECcCCcccCCCCCccC
Confidence 65 77522 2356788 99999875 4455556899999999999999999999999886
No 8
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=97.97 E-value=1e-05 Score=89.39 Aligned_cols=95 Identities=14% Similarity=0.216 Sum_probs=72.4
Q ss_pred EeccCCCccCCCCCCCCCccccCCCCC--CCeEEEEecCCCCHHHHHHHHHhcCCcEEEEEeCCCCCceecCCCCCcccc
Q 011244 62 VVYPKANQKACKGFDEVDLSFKSRPGG--LPTFLLVDRGDCYFTLKAWNAQKGGAAAILVADDKTEPLITMDTPEEENAD 139 (490)
Q Consensus 62 lv~~~~~~~gC~~~~~~~~~~~~~~~~--~g~IvLV~RG~CsF~~Kv~nAQ~aGA~aVII~nn~~~~l~tM~~p~d~~~~ 139 (490)
|+++. ....|.+..... ..+ +++|+|++||.|.|.+|..+++++||+++|++|+. +. +.
T Consensus 261 lv~~~-~~~~C~~~~l~~------~~vdl~GkIvlc~~g~~~~~~k~~~~~~~Ga~g~i~~n~~-~~---~~-------- 321 (649)
T 3i6s_A 261 VIYNK-TLSDCSSEELLS------QVENPENTIVICDDNGDFSDQMRIITRARLKAAIFISEDP-GV---FR-------- 321 (649)
T ss_dssp EECCT-TTTTCCCHHHHT------TSSSGGGCEEEECCCSCHHHHHHHHHHHTCSEEEEECCCG-GG---GG--------
T ss_pred eEecc-cccccccccccc------cccccCCcEEEEeCCCccHHHHHHHHHhcCceEEEEecCc-cc---cc--------
Confidence 44433 456798753221 233 79999999999999999999999999999999875 21 11
Q ss_pred ccccCCcceeEEEEehhhHHHHHHHHhCCCeEEEEEEec
Q 011244 140 AEYLQNITIPSALISKSLGDSIKKSLSGGEMVNMNLDWT 178 (490)
Q Consensus 140 ~~~~~~i~IPsv~Isk~~G~~L~~~l~~g~~V~v~l~~~ 178 (490)
.....||+++|+.++|+.|++++.++....+++.+.
T Consensus 322 ---~~~~~~P~~~v~~~~g~~i~~yi~s~~~~~a~i~~~ 357 (649)
T 3i6s_A 322 ---SATFPNPGVVVNKKEGKQVINYVKNSVTPTATITFQ 357 (649)
T ss_dssp ---CCCCCSCEEEECHHHHHHHHHHHHTCSSCEEEEEEE
T ss_pred ---cccCcCCEEEEcHHHHHHHHHHHhcCCCceEEEeec
Confidence 123578999999999999999999887656666553
No 9
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=97.83 E-value=5.7e-06 Score=65.29 Aligned_cols=44 Identities=23% Similarity=0.499 Sum_probs=37.8
Q ss_pred chhhHhhh-ccCCCCCCceecCCC-ceeeeeCCCccceecCCeeeecCC
Q 011244 411 DVDECEEK-LACQCPECKCKDTWG-SYECSCGSGLLYMQEHDTCISKDV 457 (490)
Q Consensus 411 didEc~~~-~~c~c~~~~c~nt~g-~y~C~C~~~~~~~~~~~tC~~~~~ 457 (490)
|||||... ..|+ -.|.||.| ||.|.|..||.+..|+.||++...
T Consensus 4 d~~eC~~~nggC~---h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d~de 49 (69)
T 1kli_L 4 DQLICVNENGGCE---QYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVE 49 (69)
T ss_dssp CCCCTTSGGGGCS---SEEEEETTTEEEEECCTTEEECTTSSCEEECSS
T ss_pred ccccccCCCCCcC---CEeEcCCCCCEEEeCCCCCeECCCCCcccCccc
Confidence 89999864 5565 37999999 899999999999999999998654
No 10
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=97.77 E-value=5.1e-05 Score=79.80 Aligned_cols=77 Identities=21% Similarity=0.254 Sum_probs=60.2
Q ss_pred CCCCCeEEEEecCCC-----CHHHHHHHHHhcCCcEEEEEeCCCCC----ceecCCCCCccccccccCCcceeEEEEehh
Q 011244 86 PGGLPTFLLVDRGDC-----YFTLKAWNAQKGGAAAILVADDKTEP----LITMDTPEEENADAEYLQNITIPSALISKS 156 (490)
Q Consensus 86 ~~~~g~IvLV~RG~C-----sF~~Kv~nAQ~aGA~aVII~nn~~~~----l~tM~~p~d~~~~~~~~~~i~IPsv~Isk~ 156 (490)
+.++++|+|++||.| .|..|+.+|+++||+++||+||...+ ...++ ......||+++|+++
T Consensus 270 ~~~~gkivl~~rg~~~~~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~----------~~~~~~~p~~~v~~~ 339 (441)
T 1y9z_A 270 GNMANKICLVERVGNQGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVD----------ANSDITVPSVSVDRA 339 (441)
T ss_dssp CCCTTEEEEEECCSCSSSSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEEC----------TTCCCCSCEEEECHH
T ss_pred CCccccEEEEeccccCcccccHHHHHHHHHhcCCeEEEEEeCCCccccccccccc----------cccCccccEEEEeHH
Confidence 467899999999987 89999999999999999999986422 11221 123468999999999
Q ss_pred hHHHHHHHHhCCCeEEEE
Q 011244 157 LGDSIKKSLSGGEMVNMN 174 (490)
Q Consensus 157 ~G~~L~~~l~~g~~V~v~ 174 (490)
+|+.|++++. ..++++
T Consensus 340 ~g~~l~~~~~--~~~t~~ 355 (441)
T 1y9z_A 340 TGLALKAKLG--QSTTVS 355 (441)
T ss_dssp HHHHHHTTTT--SEEEEE
T ss_pred HHHHHHHHhc--CCcccc
Confidence 9999998874 345543
No 11
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=97.76 E-value=9.2e-06 Score=61.01 Aligned_cols=42 Identities=24% Similarity=0.562 Sum_probs=35.3
Q ss_pred hhHhhh-ccCCCCCCceecCCCceeeeeCCCccceecCCeeeecCC
Q 011244 413 DECEEK-LACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCISKDV 457 (490)
Q Consensus 413 dEc~~~-~~c~c~~~~c~nt~g~y~C~C~~~~~~~~~~~tC~~~~~ 457 (490)
|||... ..|+ . .|.||.|||.|.|+.||.+..++.+|++...
T Consensus 2 dEC~~~~~~C~--~-~C~nt~Gsy~C~C~~Gy~L~~d~~~C~dide 44 (55)
T 2jkh_L 2 KLCSLDNGDCD--Q-FCHEEQNSVVCSCARGYTLADNGKACIPTGP 44 (55)
T ss_dssp CCTTTGGGGCS--S-EEEEETTEEEEECCTTEEECTTSSCEEESSS
T ss_pred ccccCCCCCcC--c-EeEcCCCCeEEeCCCCCEECCCCCeeccCcc
Confidence 789763 4554 3 8999999999999999999999999988643
No 12
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=97.70 E-value=8.8e-06 Score=64.51 Aligned_cols=27 Identities=44% Similarity=0.914 Sum_probs=22.0
Q ss_pred chhhHhhh-ccCCCCCCceecCCCceeee
Q 011244 411 DVDECEEK-LACQCPECKCKDTWGSYECS 438 (490)
Q Consensus 411 didEc~~~-~~c~c~~~~c~nt~g~y~C~ 438 (490)
|||||... ..|+ ....|+||.|||+|.
T Consensus 2 DidEC~~~~~~C~-~~~~C~Nt~Gsy~C~ 29 (71)
T 2kl7_A 2 DVNECLTIPEACK-GEMKCINHYGGYLCL 29 (71)
T ss_dssp CSCCTTCCCCSCT-TEEEEEETTCCEEEE
T ss_pred ccccccCCCCCCC-CCCEeECCCCCeEec
Confidence 89999864 4565 345799999999999
No 13
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=97.67 E-value=0.0001 Score=84.63 Aligned_cols=65 Identities=31% Similarity=0.459 Sum_probs=54.3
Q ss_pred CCCCeEEEEecCCCCHHHHHHHHHhcCCcEEEEEeCCCCCc-eecCCCCCccccccccCCcceeEEEEehhhHHHHHH
Q 011244 87 GGLPTFLLVDRGDCYFTLKAWNAQKGGAAAILVADDKTEPL-ITMDTPEEENADAEYLQNITIPSALISKSLGDSIKK 163 (490)
Q Consensus 87 ~~~g~IvLV~RG~CsF~~Kv~nAQ~aGA~aVII~nn~~~~l-~tM~~p~d~~~~~~~~~~i~IPsv~Isk~~G~~L~~ 163 (490)
.++++|+|++||.|+|.+|+.+|+++||.++|++|+..+.. +.+ + ....||+++|++++|+.|+.
T Consensus 278 ~v~Gkivl~~rg~~~~~~k~~~~~~~Ga~gvi~~n~~~~~~~~~~--~----------~~~~iP~~~i~~~~g~~l~~ 343 (926)
T 1xf1_A 278 DVKGKIALIERGDIDFKDKIAKAKKAGAVGVLIYDNQDKGFPIEL--P----------NVDQMPAAFISRKDGLLLKD 343 (926)
T ss_dssp TCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSTTCCCEEC--C----------CSTTCCEEEECHHHHHHHHH
T ss_pred hcCCeEEEEECCCCCHHHHHHHHHhCCCcEEEEEecCCCCccccc--C----------ccccccEEEEeHHHHHHHHh
Confidence 56899999999999999999999999999999998864322 222 1 23578999999999998884
No 14
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=97.54 E-value=1e-05 Score=69.08 Aligned_cols=52 Identities=33% Similarity=0.817 Sum_probs=8.7
Q ss_pred hc-CCCCCCCCCccCCcchhhHhhhccCCCCCCceecCCCceeeeeCCCccceecCCee
Q 011244 395 CA-GFQETTEPAICLSEDVDECEEKLACQCPECKCKDTWGSYECSCGSGLLYMQEHDTC 452 (490)
Q Consensus 395 C~-gf~~~~~p~~C~~~didEc~~~~~c~c~~~~c~nt~g~y~C~C~~~~~~~~~~~tC 452 (490)
|. ||.- .....|. |||||.....|+ ..|+||.|+|+|.|+.||.+..+.++|
T Consensus 54 C~~Gy~g-~~g~~C~--dideC~~~~~C~---~~C~n~~gsy~C~C~~Gy~~~~d~~~C 106 (107)
T 2w2n_E 54 CPDGFQL-VAQRRCE--DIDECQDPDTCS---QLCVNLEGGYKCQCEEGFQLDPHTKAC 106 (107)
T ss_dssp CCTTCEE-ETTTEEE--C-----------------------------------------
T ss_pred CCCCccc-cCCCccc--cccccCCCCCcC---CeeecCCCCEEEECCCCceECCCCCcc
Confidence 55 7752 2346798 999998645665 489999999999999999998888887
No 15
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=97.53 E-value=3.6e-05 Score=69.77 Aligned_cols=60 Identities=35% Similarity=0.773 Sum_probs=45.2
Q ss_pred HHHHhhc---CCCCCCCCCccCCcchhhHhhh-ccCCCCCCceecCCCceeeeeCCCccceecCCeee
Q 011244 390 VLKAICA---GFQETTEPAICLSEDVDECEEK-LACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCI 453 (490)
Q Consensus 390 vl~~iC~---gf~~~~~p~~C~~~didEc~~~-~~c~c~~~~c~nt~g~y~C~C~~~~~~~~~~~tC~ 453 (490)
-++-+|. ||.-......|. |||||+.. ..|+ ...|+||.|||+|.|+.||.+..++++|+
T Consensus 99 ~y~C~C~~g~G~~~~~~~~~c~--dideC~~~~~~C~--~g~C~n~~gsy~C~C~~Gy~g~~d~~~C~ 162 (162)
T 1uzk_A 99 EYKILCPGGEGFRPNPITVILE--DIDECQELPGLCQ--GGKCINTFGSFQCRCPTGYYLNEDTRVCD 162 (162)
T ss_dssp HHHHHCTTCTTEEECTTTCCEE--ECCHHHHCGGGGB--TSEEEECSSCEEEECCTTCCBCTTTCBBC
T ss_pred CceeECCCCCCcccCCCCCccC--ccccccCCCCCcC--CCEeEcCCCCEEeeCCCCccCCCCCCccC
Confidence 3455665 565222224677 99999974 4576 34899999999999999999999999985
No 16
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=97.50 E-value=3.3e-05 Score=63.08 Aligned_cols=55 Identities=31% Similarity=0.755 Sum_probs=42.5
Q ss_pred hc-CCCCCCCCCccCCcchhhHhhhccCCCCCCceecCCCceeeee--CCCccceecCCeeeec
Q 011244 395 CA-GFQETTEPAICLSEDVDECEEKLACQCPECKCKDTWGSYECSC--GSGLLYMQEHDTCISK 455 (490)
Q Consensus 395 C~-gf~~~~~p~~C~~~didEc~~~~~c~c~~~~c~nt~g~y~C~C--~~~~~~~~~~~tC~~~ 455 (490)
|. ||.-...-..|. |||||.. .+|+ ..|+||.|+|+|.| ..||.+..+.++|.+.
T Consensus 29 C~~G~~~~~~g~~C~--dideC~~-~~C~---~~C~n~~g~y~C~C~g~~G~~~~~~~~~C~di 86 (87)
T 1z6c_A 29 CPEGYRYNLKSKSCE--DIDECSE-NMCA---QLCVNYPGGYTCYCDGKKGFKLAQDQKSCEVV 86 (87)
T ss_dssp SSTTCEEETTTTEEE--CCCHHHH-SCCS---SEECCCSSSCCEECCSSSCCBCCTTSSSCBCC
T ss_pred CCCCceECCCCCcCC--CcCeeCC-CCCC---CEEEccCCCEEEECCCCcCCcccCCCCcceEC
Confidence 55 775333346887 9999975 4665 48999999999999 5788888888889753
No 17
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=97.44 E-value=5.4e-05 Score=61.17 Aligned_cols=43 Identities=35% Similarity=0.850 Sum_probs=32.5
Q ss_pred ccCCcchhhHhhhccCCCCCCceecCCCceeeeeCCCccceecCCeeee
Q 011244 406 ICLSEDVDECEEKLACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCIS 454 (490)
Q Consensus 406 ~C~~~didEc~~~~~c~c~~~~c~nt~g~y~C~C~~~~~~~~~~~tC~~ 454 (490)
+|. |||||....+|+ ...|+|+.|+|+|.|+.||.+ ++.+|.+
T Consensus 1 sC~--dideC~~~~~C~--~g~C~n~~g~y~C~C~~Gy~~--~g~~C~d 43 (82)
T 1emn_A 1 SAV--DMDECKEPDVCK--HGQCINTDGSYRCECPFGYIL--AGNECVD 43 (82)
T ss_dssp CCC--CCCSSSSTTSCS--SSEECCCSSCCCEECCTTEEE--ETTEEEE
T ss_pred CCC--ccccCCCCCCcC--CCEEEecCCCEEEECCCCeEC--CCCccCC
Confidence 366 899998644564 458999999999999999875 4556654
No 18
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=97.42 E-value=5.9e-05 Score=74.91 Aligned_cols=42 Identities=17% Similarity=0.570 Sum_probs=30.7
Q ss_pred chhhHhhh-ccCCCCCCceecCCCceeeeeCCCccceecCCeeeec
Q 011244 411 DVDECEEK-LACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCISK 455 (490)
Q Consensus 411 didEc~~~-~~c~c~~~~c~nt~g~y~C~C~~~~~~~~~~~tC~~~ 455 (490)
|||||... ..|+ +.+.|.||-|||.|.|+.||. .++.+|.+.
T Consensus 4 DiDEC~~~~~~C~-~~a~C~Nt~Gsy~C~C~~Gy~--GnG~~C~d~ 46 (285)
T 1gl4_A 4 AQQTCANNRHQCS-VHAECRDYATGFCCRCVANYT--GNGRQCVAE 46 (285)
T ss_dssp ---CHHHHGGGSC-TTEEEEECSSCEEEEECTTEE--ECSSSEEET
T ss_pred cchhccCCCCCCC-CCCEeEcCCCCeEEEcCCCCC--CCCCcCCCC
Confidence 89999974 4565 457899999999999999986 466677654
No 19
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.34 E-value=6.2e-05 Score=77.25 Aligned_cols=58 Identities=28% Similarity=0.741 Sum_probs=24.4
Q ss_pred hhc-CCCCCCCCCccCCcchhhHhhhccCCCCCCceecCCCceeeeeCCCccceecCCeeeecC
Q 011244 394 ICA-GFQETTEPAICLSEDVDECEEKLACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCISKD 456 (490)
Q Consensus 394 iC~-gf~~~~~p~~C~~~didEc~~~~~c~c~~~~c~nt~g~y~C~C~~~~~~~~~~~tC~~~~ 456 (490)
.|. ||+-...-..|. |||||.+...|+ . .|.||.|||+|.|..||.+..++.+|....
T Consensus 27 ~C~~G~~l~~~~~~C~--d~~eC~~~~~C~--~-~C~~~~g~~~C~C~~g~~l~~d~~~C~~~~ 85 (386)
T 3v65_B 27 TCHTGYRLTEDGRTCQ--DVNECAEEGYCS--Q-GCTNSEGAFQCWCEAGYELRPDRRSCKALG 85 (386)
T ss_dssp ---------------------------CCT--T-EEC-----CCEECCTTEEECTTSSCEEECS
T ss_pred ECCCCceECCCCCccC--ccceeCCcCccc--C-cCCCCCCCCeEEECCCceEcCCCCeECCcc
Confidence 465 886222346897 999998655665 3 599999999999999999988899998654
No 20
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=97.33 E-value=8.2e-05 Score=67.39 Aligned_cols=43 Identities=30% Similarity=0.674 Sum_probs=36.0
Q ss_pred chhhHhhhccCCCCCCceecCCCceeeeeCCCccceecCCeeeec
Q 011244 411 DVDECEEKLACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCISK 455 (490)
Q Consensus 411 didEc~~~~~c~c~~~~c~nt~g~y~C~C~~~~~~~~~~~tC~~~ 455 (490)
|||||....+|+ ...|.||.|||+|.|+.||.+..++.+|.+.
T Consensus 2 dideC~~~~~C~--~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~d~ 44 (162)
T 1uzk_A 2 DVNECLDPTTCI--SGNCVNTPGSYICDCPPDFELNPTRVGCVDT 44 (162)
T ss_dssp CCCGGGSTTSSB--TSEEEEETTEEEEECCTTCEECTTSSBEECC
T ss_pred ccccCCCCCCCC--CCEeECCCCCEEEeCCCCCeECCCCCcccCC
Confidence 899999656775 4689999999999999999987777777643
No 21
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=97.32 E-value=6.3e-05 Score=64.91 Aligned_cols=52 Identities=33% Similarity=0.777 Sum_probs=40.3
Q ss_pred hc-CCCCCCCCCccCCcchhhHhhhccCCCCCCceecCCCceeeeeCCCccceec-CCee
Q 011244 395 CA-GFQETTEPAICLSEDVDECEEKLACQCPECKCKDTWGSYECSCGSGLLYMQE-HDTC 452 (490)
Q Consensus 395 C~-gf~~~~~p~~C~~~didEc~~~~~c~c~~~~c~nt~g~y~C~C~~~~~~~~~-~~tC 452 (490)
|. ||.... ...|. |||||....+| ...|+|+.|+|+|.|+.||....+ +++|
T Consensus 65 C~~Gy~~~~-g~~C~--dideC~~~~~C---~~~C~n~~g~y~C~C~~G~~g~~~~g~~C 118 (118)
T 1dx5_I 65 CPEGYILDD-GFICT--DIDECENGGFC---SGVCHNLPGTFECICGPDSALAGQIGTDC 118 (118)
T ss_dssp CCTTEEEET-TTEEE--ECCHHHHCSSC---SSEEEECSSSEEEEECSSSSCEEEESCCC
T ss_pred CCCCccCCC-CCccc--cccccCCCCCC---cCeEEeCCCCEEEECCCCCccCCCCCCCC
Confidence 54 775222 67897 99999975565 468999999999999999988776 5555
No 22
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=97.27 E-value=7.8e-05 Score=60.82 Aligned_cols=43 Identities=37% Similarity=0.815 Sum_probs=34.5
Q ss_pred chhhHhhhccCCCCCCceecCCCceeeeeCCCccceecCCeeee
Q 011244 411 DVDECEEKLACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCIS 454 (490)
Q Consensus 411 didEc~~~~~c~c~~~~c~nt~g~y~C~C~~~~~~~~~~~tC~~ 454 (490)
|||||... ++.|....|+|+.|+|+|.|+.||.+..++.+|.+
T Consensus 2 dideC~~~-~~~C~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~d 44 (87)
T 1z6c_A 2 DVDECSLK-PSICGTAVCKNIPGDFECECPEGYRYNLKSKSCED 44 (87)
T ss_dssp CSCSSSSS-SSSBTTSSCCCBTTBCCCSSSTTCEEETTTTEEEC
T ss_pred ccccccCC-CCCCCCCEeECCCCCEEEECCCCceECCCCCcCCC
Confidence 89999875 32345568999999999999999987766777754
No 23
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=97.27 E-value=8.8e-05 Score=66.11 Aligned_cols=55 Identities=35% Similarity=0.806 Sum_probs=43.8
Q ss_pred hhc-CCCCCCCCCccCCcchhhHhhh-ccCCCCCCceecCCCceeeeeCCCccceecCCeee
Q 011244 394 ICA-GFQETTEPAICLSEDVDECEEK-LACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCI 453 (490)
Q Consensus 394 iC~-gf~~~~~p~~C~~~didEc~~~-~~c~c~~~~c~nt~g~y~C~C~~~~~~~~~~~tC~ 453 (490)
+|. ||.. ..-..|. |||||+.. ..|+ . ..|+||.|||+|.|+.||.+..++++|+
T Consensus 91 ~C~~Gy~~-~~g~~C~--dideC~~~~~~C~-~-g~C~n~~g~y~C~C~~Gy~g~~~~~~C~ 147 (147)
T 2w86_A 91 ICGKGYSR-IKGTQCE--DIDECEVFPGVCK-N-GLCVNTRGSFKCQCPSGMTLDATGRICL 147 (147)
T ss_dssp TTCTTEEE-EETTEEE--ECCHHHHSTTCSS-S-SEEEEETTEEEEECCTTCCBCTTSSCBC
T ss_pred cCCCcccc-CCCCccC--ccccccCCCCCCC-C-CEEECCCCCEEeeCCCCCccCCCCCeeC
Confidence 576 7741 1346787 99999964 3465 3 4899999999999999999999999986
No 24
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.24 E-value=6.5e-05 Score=77.65 Aligned_cols=56 Identities=30% Similarity=0.768 Sum_probs=44.9
Q ss_pred hc-CCCCCCCCCccCCcchhhHhhhccCCCCCCceecCCCceeeeeCCCccceecCCeeeecC
Q 011244 395 CA-GFQETTEPAICLSEDVDECEEKLACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCISKD 456 (490)
Q Consensus 395 C~-gf~~~~~p~~C~~~didEc~~~~~c~c~~~~c~nt~g~y~C~C~~~~~~~~~~~tC~~~~ 456 (490)
|. ||.- ..-..|. |||||.+...|+ . .|.||.|||.|.|..||.+..+..+|....
T Consensus 25 C~~G~~~-~~~~~C~--dideC~~~~~C~--~-~C~n~~g~~~C~C~~g~~~~~~~~~C~~~~ 81 (400)
T 3p5b_L 25 CPDGFQL-VAQRRCE--DIDECQDPDTCS--Q-LCVNLEGGYKCQCEEGFQLDPHTKACKAVG 81 (400)
T ss_dssp CCTTEEE-CSSSCEE--ECCCCSTTSSCS--S-CCBCCSSSCBCCCCTTCCCCTTTSSCCCST
T ss_pred CCCCCCc-CCCCccc--CchhhhccCCCC--C-ccCCCccceeeeccccccccccccceeecc
Confidence 65 8862 2346797 999998655554 4 899999999999999999988999997654
No 25
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=97.15 E-value=0.00015 Score=58.57 Aligned_cols=52 Identities=33% Similarity=0.753 Sum_probs=39.4
Q ss_pred hc-CCCCCCCCCccCCcchhhHhhhccCCCCCCceecCCCceeeeeCCCccceecCCeee
Q 011244 395 CA-GFQETTEPAICLSEDVDECEEKLACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCI 453 (490)
Q Consensus 395 C~-gf~~~~~p~~C~~~didEc~~~~~c~c~~~~c~nt~g~y~C~C~~~~~~~~~~~tC~ 453 (490)
|. ||. ..-..|. |||||....+|+ ...|+|+.|+|+|.|+.||....+ .+|+
T Consensus 30 C~~Gy~--~~g~~C~--dideC~~~~~C~--~~~C~n~~g~y~C~C~~G~~g~~~-~~C~ 82 (82)
T 1emn_A 30 CPFGYI--LAGNECV--DTDECSVGNPCG--NGTCKNVIGGFECTCEEGFEPGPM-MTCE 82 (82)
T ss_dssp CCTTEE--EETTEEE--ECCGGGTCCTTS--SSCEEECSSSEEECCSSSSCCCSS-SCCC
T ss_pred CCCCeE--CCCCccC--CcccccCCCCCC--CCEeECCCCCEEeECCCCeEeCCC-CccC
Confidence 54 774 1345787 999998655665 348999999999999999987666 6663
No 26
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=97.02 E-value=0.00019 Score=52.97 Aligned_cols=31 Identities=23% Similarity=0.701 Sum_probs=28.6
Q ss_pred ceecCCCceeeeeCCCccceecCCeeeecCC
Q 011244 427 KCKDTWGSYECSCGSGLLYMQEHDTCISKDV 457 (490)
Q Consensus 427 ~c~nt~g~y~C~C~~~~~~~~~~~tC~~~~~ 457 (490)
.|.||.|||+|.|+.||.+..|+.+|++...
T Consensus 11 ~C~n~~gs~~C~C~~Gy~L~~d~~tC~dide 41 (51)
T 1kig_L 11 FCREERSEVRCSCAHGYVLGDDSKSCVSTER 41 (51)
T ss_dssp CCCEETTEECCCCCTTEEECTTSSCEEECSS
T ss_pred EeEcCCCCeEEeCCCCcEECCCCCccccCCc
Confidence 7999999999999999999999999998654
No 27
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=97.01 E-value=0.00025 Score=57.56 Aligned_cols=42 Identities=31% Similarity=0.706 Sum_probs=31.0
Q ss_pred chhhHhhh-ccCCCCCCceecCCCceeeeeCCCccce-ecCCeeee
Q 011244 411 DVDECEEK-LACQCPECKCKDTWGSYECSCGSGLLYM-QEHDTCIS 454 (490)
Q Consensus 411 didEc~~~-~~c~c~~~~c~nt~g~y~C~C~~~~~~~-~~~~tC~~ 454 (490)
|||||... ..|+ ...|+||.|+|+|.|+.||.+. .++.+|.+
T Consensus 2 dideC~~~~~~C~--~g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~d 45 (86)
T 1lmj_A 2 DIDECRISPDLCG--RGQCVNTPGDFECKCDEGYESGFMMMKNCMD 45 (86)
T ss_dssp CCCTTTTCSSTTT--TSCEEEETTEEEECCCSSEEECTTTSSSEEE
T ss_pred ccccccCCCCCCC--CCEEECCCCCEEeeCCCCcCccCCCCCccCC
Confidence 89999875 3354 3489999999999999999753 23445543
No 28
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=96.98 E-value=0.00025 Score=63.61 Aligned_cols=43 Identities=26% Similarity=0.692 Sum_probs=35.7
Q ss_pred chhhHhhhccCCCCCCceecCCCceeeeeCCCccceecCCeeee
Q 011244 411 DVDECEEKLACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCIS 454 (490)
Q Consensus 411 didEc~~~~~c~c~~~~c~nt~g~y~C~C~~~~~~~~~~~tC~~ 454 (490)
|+|||.......|.. .|.|+.|+|.|.|..||.+..++.+|.+
T Consensus 116 d~~eC~~~~~~~C~~-~C~n~~g~~~C~C~~Gy~l~~~~~~C~~ 158 (159)
T 1nzi_A 116 DINECTDFVDVPCSH-FCNNFIGGYFCSCPPEYFLHDDMKNCGV 158 (159)
T ss_dssp ECCTTTC-CCCCSSS-EEEEETTEEEEECCTTCEECTTSSCEEC
T ss_pred cCcccCCCCCCCCCC-cccCcCCCEEEecCCCcEECCCCCcccc
Confidence 899998754334443 7999999999999999999999999975
No 29
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=96.96 E-value=0.00023 Score=64.90 Aligned_cols=44 Identities=30% Similarity=0.800 Sum_probs=36.0
Q ss_pred chhhHhhhcc--CCCCCCceecCCCceeeeeCCCccceecCCeeeec
Q 011244 411 DVDECEEKLA--CQCPECKCKDTWGSYECSCGSGLLYMQEHDTCISK 455 (490)
Q Consensus 411 didEc~~~~~--c~c~~~~c~nt~g~y~C~C~~~~~~~~~~~tC~~~ 455 (490)
|+|||..... ..|.. .|.||.|+|.|.|..||.+..++.+|.+.
T Consensus 123 di~eC~~~~~~~~~C~~-~C~n~~g~~~C~C~~Gy~l~~d~~~C~~~ 168 (170)
T 1szb_A 123 DIDECQVAPGEAPTCDH-HCHNHLGGFYCSCRAGYVLHRNKRTCSEQ 168 (170)
T ss_dssp ECCTTCCCTTSCCSSSS-EEEEETTEEEEECCTTEEECTTSSCEEEC
T ss_pred ccCcccCCCCCCCccCC-ccccCCCCEEEeCCCCcEECCCCCccccc
Confidence 8999987532 11434 79999999999999999999999999864
No 30
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=96.95 E-value=0.00028 Score=48.66 Aligned_cols=32 Identities=44% Similarity=0.827 Sum_probs=26.4
Q ss_pred chhhHhhhccCCCCCCceecCCCceeeeeCCCcc
Q 011244 411 DVDECEEKLACQCPECKCKDTWGSYECSCGSGLL 444 (490)
Q Consensus 411 didEc~~~~~c~c~~~~c~nt~g~y~C~C~~~~~ 444 (490)
|+|||+. .+|+ ....|.|+.|+|.|.|+.+|.
T Consensus 2 d~d~C~~-~pC~-ngg~C~~~~~~~~C~C~~G~~ 33 (39)
T 1edm_B 2 DGDQCES-NPCL-NGGSCKDDINSYECWCPFGFE 33 (39)
T ss_dssp CCCTTTT-CCCC-TTCEEEEETTEEEEECCTTCC
T ss_pred ccccCCC-CCCC-CCCEeEcCCCceEeECCCCCc
Confidence 7899985 3666 345899999999999999885
No 31
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.95 E-value=0.00028 Score=71.29 Aligned_cols=43 Identities=26% Similarity=0.696 Sum_probs=27.4
Q ss_pred hhhHhhhccCCCCCCceecCCCceeeeeCCCccceecCCeeeecCC
Q 011244 412 VDECEEKLACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCISKDV 457 (490)
Q Consensus 412 idEc~~~~~c~c~~~~c~nt~g~y~C~C~~~~~~~~~~~tC~~~~~ 457 (490)
||||.+...|+ . .|.||.|||+|.|..||.+..++.+|.....
T Consensus 1 i~ec~~~~~C~--~-~C~n~~g~~~C~C~~g~~l~~d~~~C~~~~~ 43 (349)
T 3v64_C 1 VNECAEEGYCS--Q-GCTNSEGAFQCWCEAGYELRPDRRSCKALGP 43 (349)
T ss_dssp --------CCS--S-EECCC---CCEECCTTEEECTTSSCEEESSS
T ss_pred CcccCCCCCCc--C-eeecCCCCeEEECCCCccCCCCCCccccccc
Confidence 69998555555 3 8999999999999999999999999987543
No 32
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=96.93 E-value=0.00036 Score=61.72 Aligned_cols=49 Identities=31% Similarity=0.597 Sum_probs=40.2
Q ss_pred CCccCCcchhhHhhh-ccCCCCCCceecCCCceeeeeCCCccceecCCeeeec
Q 011244 404 PAICLSEDVDECEEK-LACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCISK 455 (490)
Q Consensus 404 p~~C~~~didEc~~~-~~c~c~~~~c~nt~g~y~C~C~~~~~~~~~~~tC~~~ 455 (490)
...|. |||||... ..|+ ....|+||.|+|+|.|+.||....+..+|...
T Consensus 90 ~~~C~--dideC~~~~~~C~-~~~~C~n~~g~y~C~C~~Gy~g~~~~~~C~~~ 139 (143)
T 2bou_A 90 ENTCQ--DVDECSSGQHQCD-SSTVCFNTVGSYSCRCRPGWKPRHGIPNNQKD 139 (143)
T ss_dssp GCCEE--ECCHHHHTCCCCC-TTSEEEECSSCEEEECCSSSCBCTTCCSSBTT
T ss_pred CCCcC--CccCccCcCCCCC-CCCEEECCCCCEEeeCCCCcccCCCCccCccC
Confidence 34787 99999973 5665 44689999999999999999998888888653
No 33
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=96.92 E-value=0.00062 Score=52.30 Aligned_cols=44 Identities=32% Similarity=0.679 Sum_probs=34.1
Q ss_pred chhhHhhhccCCCCC--CceecCCCceeeeeCCCcc-c--eecCCeeeecC
Q 011244 411 DVDECEEKLACQCPE--CKCKDTWGSYECSCGSGLL-Y--MQEHDTCISKD 456 (490)
Q Consensus 411 didEc~~~~~c~c~~--~~c~nt~g~y~C~C~~~~~-~--~~~~~tC~~~~ 456 (490)
++|||.. .+|+ .+ ..|.|+.|+|.|.|+.||. - .++..+|....
T Consensus 10 ~~d~C~s-nPC~-nga~gtC~~~~g~y~C~C~~Gy~~G~~C~~~~~C~~~~ 58 (61)
T 2k2s_B 10 TPAACSS-NPCG-PEAAGTCKETNSGYICRCNQGYRISLDGTGNVTCIVRQ 58 (61)
T ss_dssp SCCHHHH-CSSC-SSSCCEEEECSSEEEEECCTTEEEEECSSSCEEEEESS
T ss_pred CCCcCcC-CCCc-CCCccccccCCCceEeECCCCCccCCCCCCCCEecccc
Confidence 8999985 4676 33 5899999999999999997 2 34566787653
No 34
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=96.77 E-value=0.00054 Score=60.91 Aligned_cols=42 Identities=36% Similarity=0.755 Sum_probs=34.6
Q ss_pred chhhHhhhccCCCCCCceecCCCceeeeeCCCccceecCCeeeec
Q 011244 411 DVDECEEKLACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCISK 455 (490)
Q Consensus 411 didEc~~~~~c~c~~~~c~nt~g~y~C~C~~~~~~~~~~~tC~~~ 455 (490)
|||||+. .+|+ ...|+|+.|+|+|.|+.||.....+.+|++.
T Consensus 3 dideC~~-~pC~--ng~C~n~~g~y~C~C~~G~~g~~~~~~C~~~ 44 (147)
T 2w86_A 3 DIDECES-SPCI--NGVCKNSPGSFICECSSESTLDPTKTICIET 44 (147)
T ss_dssp CCCGGGG-CCSB--TSEEEEETTEEEEECCTTEEECTTSSBEEEC
T ss_pred cCccCcC-CCCC--CCEeECCCCCEEeECCCCcccCCCCCeecCC
Confidence 8999986 4665 3489999999999999999887667777653
No 35
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=96.64 E-value=0.0008 Score=49.99 Aligned_cols=31 Identities=23% Similarity=0.546 Sum_probs=28.4
Q ss_pred ceecCCC-ceeeeeCCCccceecCCeeeecCC
Q 011244 427 KCKDTWG-SYECSCGSGLLYMQEHDTCISKDV 457 (490)
Q Consensus 427 ~c~nt~g-~y~C~C~~~~~~~~~~~tC~~~~~ 457 (490)
.|.||.| ||+|.|+.||.+..|++||++...
T Consensus 12 ~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d~de 43 (53)
T 2bz6_L 12 YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVE 43 (53)
T ss_dssp EEEEETTTEEEEECCTTEEECTTSSCEEECSS
T ss_pred EeEcCCCCCEEeeCCCCCEECCCCCcccCCcc
Confidence 7999999 899999999999999999998654
No 36
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.59 E-value=0.00088 Score=74.32 Aligned_cols=55 Identities=31% Similarity=0.756 Sum_probs=44.9
Q ss_pred hc-CCCCCCCCCccCCcchhhHhhhccCCCCCCceecCCCceeeeeCCCccceecCCeeeec
Q 011244 395 CA-GFQETTEPAICLSEDVDECEEKLACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCISK 455 (490)
Q Consensus 395 C~-gf~~~~~p~~C~~~didEc~~~~~c~c~~~~c~nt~g~y~C~C~~~~~~~~~~~tC~~~ 455 (490)
|. ||+- ..-..|. |||||.+...|+ ..|.||.|||+|.|..||.+..++++|...
T Consensus 319 C~~G~~~-~~~~~C~--dideC~~~~~C~---~~C~n~~g~y~C~C~~G~~~~~~~~~C~~~ 374 (699)
T 1n7d_A 319 CPDGFQL-VAQRRCE--DIDECQDPDTCS---QLCVNLEGGYKCQCEEGFQLDPHTKACKAV 374 (699)
T ss_dssp CCSSSCC-CSSSCCC--CCCCCSSSSSCT---TTCCBCSSCBCCCCCSSCBCCSSCCCCBCC
T ss_pred CCCCeEc-CCCCccc--CccccCCCCccc---cccccCCCCeeeeeecccccCCCCCccccc
Confidence 55 8863 3356798 999998666664 389999999999999999998899999765
No 37
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=96.55 E-value=0.0013 Score=49.99 Aligned_cols=31 Identities=23% Similarity=0.505 Sum_probs=28.0
Q ss_pred ceecCC-CceeeeeCCCccceecCCeeeecCC
Q 011244 427 KCKDTW-GSYECSCGSGLLYMQEHDTCISKDV 457 (490)
Q Consensus 427 ~c~nt~-g~y~C~C~~~~~~~~~~~tC~~~~~ 457 (490)
.|.||. |||+|.|+.||.+..|+.+|++...
T Consensus 12 ~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d~~~ 43 (59)
T 2wph_E 12 FCKNSADNKVVCSCTEGYRLAENQKSCEPAVP 43 (59)
T ss_dssp EEEECSTTCEEEECCTTEEECTTSSCEEESSS
T ss_pred EeEeCCCCCEEeeCCCCcEECCCCCcccCCCC
Confidence 799999 6999999999999999999998543
No 38
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=96.52 E-value=0.0015 Score=55.50 Aligned_cols=40 Identities=28% Similarity=0.680 Sum_probs=31.6
Q ss_pred chhhHhhh-ccCCCCCCceecCCCceeeeeCCCccceecCCeeee
Q 011244 411 DVDECEEK-LACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCIS 454 (490)
Q Consensus 411 didEc~~~-~~c~c~~~~c~nt~g~y~C~C~~~~~~~~~~~tC~~ 454 (490)
|||||... ..|+ ..|+|+.|+|+|.|+.||... ++.+|.+
T Consensus 28 d~neC~~~~~~C~---~~C~n~~g~y~C~C~~Gy~g~-~g~~C~d 68 (107)
T 2w2n_E 28 GTNECLDNNGGCS---YVCNDLKIGYECLCPDGFQLV-AQRRCED 68 (107)
T ss_dssp SCCGGGTGGGGCS---SEEECCSBSCEEECCTTCEEE-TTTEEEC
T ss_pred cCccCcCCCCCCC---CEeEeCCCCeEEECCCCcccc-CCCcccc
Confidence 79999974 4554 489999999999999999873 4556654
No 39
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=96.43 E-value=0.00098 Score=59.69 Aligned_cols=54 Identities=24% Similarity=0.555 Sum_probs=43.3
Q ss_pred hc-CCCCCCCCCccCCcchhhHhhhccCCCCCCce-ecCCCceeeeeCCCccceecCCeeeecC
Q 011244 395 CA-GFQETTEPAICLSEDVDECEEKLACQCPECKC-KDTWGSYECSCGSGLLYMQEHDTCISKD 456 (490)
Q Consensus 395 C~-gf~~~~~p~~C~~~didEc~~~~~c~c~~~~c-~nt~g~y~C~C~~~~~~~~~~~tC~~~~ 456 (490)
|. ||. -..|. |+|||... .+.|.. .| .|+.|+|.|.|+.||.+..++.+|.+..
T Consensus 73 C~~G~~----G~~C~--~~deC~~~-~~~C~~-~C~~n~~g~y~C~C~~Gy~l~~dG~~C~~~~ 128 (146)
T 1x7a_L 73 CQVGFE----GKNCE--LDATCNIK-NGRCKQ-FCKTGADSKVLCSCTTGYRLAPDQKSCKPAV 128 (146)
T ss_dssp CCSSEE----STTTC--EECCTTSG-GGSCSS-BCCCCSSSCCCCBCCTTEEECTTSSSEEECS
T ss_pred cCCCCc----CCcCC--CCccccCC-CCCCcC-CCCCCCCCCEEeEcCCCcEeCCCCCcCCCCC
Confidence 55 774 35788 88999864 334445 89 9999999999999999988999998764
No 40
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.41 E-value=0.00052 Score=70.35 Aligned_cols=42 Identities=24% Similarity=0.685 Sum_probs=0.0
Q ss_pred chhhHhhhccCCCCCCceecCCCceeeeeCCCccceecCCeeee
Q 011244 411 DVDECEEKLACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCIS 454 (490)
Q Consensus 411 didEc~~~~~c~c~~~~c~nt~g~y~C~C~~~~~~~~~~~tC~~ 454 (490)
|||||... +|.|.. .|.|+.|+|+|.|+.||.+..++.+|.+
T Consensus 2 ~~~~C~~~-~~~c~~-~C~~~~g~~~C~C~~G~~l~~~~~~C~d 43 (386)
T 3v65_B 2 GEENCNVN-NGGCAQ-KCQMIRGAVQCTCHTGYRLTEDGRTCQD 43 (386)
T ss_dssp --------------------------------------------
T ss_pred CcCcccCC-CCCCCC-CCcCCCCCcEeECCCCceECCCCCccCc
Confidence 79999864 566765 7999999999999999998878888865
No 41
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=96.37 E-value=0.0016 Score=57.47 Aligned_cols=40 Identities=33% Similarity=0.715 Sum_probs=31.8
Q ss_pred CCccCCcchhhHhhhc--cCCCCCCceecCCCceeeeeCCCccce
Q 011244 404 PAICLSEDVDECEEKL--ACQCPECKCKDTWGSYECSCGSGLLYM 446 (490)
Q Consensus 404 p~~C~~~didEc~~~~--~c~c~~~~c~nt~g~y~C~C~~~~~~~ 446 (490)
...|. |||||.... +|+ ....|+|+.|+|+|.|+.||...
T Consensus 38 ~~~C~--dideC~~~~~~~C~-~~~~C~n~~g~y~C~C~~Gy~g~ 79 (143)
T 2bou_A 38 METCD--DINECATLSKVSCG-KFSDCWNTEGSYDCVCSPGYEPV 79 (143)
T ss_dssp TCCCE--ECCGGGC----CCC-TTEEEEECSSCEEEEECTTEEET
T ss_pred CCcCC--ccccccCCCCCCCC-CCCEEEcCCCCeEeECCCCcccC
Confidence 46897 999999753 554 34689999999999999998764
No 42
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.31 E-value=0.00082 Score=75.84 Aligned_cols=56 Identities=30% Similarity=0.770 Sum_probs=44.7
Q ss_pred hc-CCCCCCCCCccCCcchhhHhhhccCCCCCCceecCCCceeeeeCCCccceecCCeeeecC
Q 011244 395 CA-GFQETTEPAICLSEDVDECEEKLACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCISKD 456 (490)
Q Consensus 395 C~-gf~~~~~p~~C~~~didEc~~~~~c~c~~~~c~nt~g~y~C~C~~~~~~~~~~~tC~~~~ 456 (490)
|. ||+- .....|. |||||.+. +.|.. .|.||.|||+|.|..||.+..++++|....
T Consensus 337 C~~Gy~l-~~g~~C~--dideC~~~--~~C~~-~C~n~~gsy~C~C~~Gy~l~~~~~~C~~~~ 393 (791)
T 3m0c_C 337 CPDGFQL-VAQRRCE--DIDECQDP--DTCSQ-LCVNLEGGYKCQCEEGFQLDPHTKACKAVG 393 (791)
T ss_dssp CCTTCEE-ETTTEEE--CCCCCSSS--SSCTT-TCCBCSSCBCCCCCSSEECCSSCCCCEETT
T ss_pred CCCCCcc-CCCCccc--cCcccCCC--CCCCC-eeecCCCCceeecCCCCEeCCCCceeeecc
Confidence 55 8852 3456798 99999854 44544 899999999999999999988899997754
No 43
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=96.01 E-value=0.0018 Score=63.60 Aligned_cols=41 Identities=32% Similarity=0.725 Sum_probs=34.2
Q ss_pred chhhHhhh--ccCCCCCCceecCCCceeeeeCCCccceecCCeeee
Q 011244 411 DVDECEEK--LACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCIS 454 (490)
Q Consensus 411 didEc~~~--~~c~c~~~~c~nt~g~y~C~C~~~~~~~~~~~tC~~ 454 (490)
|+|||... ..|+ -.|+||.|+|.|+|..||.+..+..+|.+
T Consensus 1 ~~~eC~~~~~~~C~---~~C~~~~~~~~C~C~~G~~l~~d~~sC~p 43 (283)
T 3f1s_B 1 AKNECHPERTDGCQ---HFCLPGQESYTCSCAQGYRLGEDHKQCVP 43 (283)
T ss_dssp --CCCCSSCSSSCS---SBCCCCTTSCCCBCCTTEEECTTSSCEEE
T ss_pred CCCccCCCCCCCCC---CEeeCCCCCeEecCCCCcccCCCCCcccc
Confidence 57999865 4554 37999999999999999999999999998
No 44
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=95.99 E-value=0.0029 Score=53.92 Aligned_cols=48 Identities=23% Similarity=0.466 Sum_probs=36.8
Q ss_pred cCCc-chhhHhhh-ccCCCCCCceecCCCceeeeeCCCccceecCCeeeecCC
Q 011244 407 CLSE-DVDECEEK-LACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCISKDV 457 (490)
Q Consensus 407 C~~~-didEc~~~-~~c~c~~~~c~nt~g~y~C~C~~~~~~~~~~~tC~~~~~ 457 (490)
|... |+|||... ..|+ . .|.||.|+|+|.|+.||.+..++.+|.+...
T Consensus 48 C~~~~~~~~C~~~~~~C~--~-~C~n~~g~y~C~C~~G~~~~~~g~~C~~~~~ 97 (114)
T 1aut_L 48 CQREVSFLNCSLDNGGCT--H-YCLEEVGWRRCSCAPGYKLGDDLLQCHPAVK 97 (114)
T ss_dssp SCEECCSSSSSSGGGGCS--S-EEEECSSSEEEECCTTEEECTTSSCEEECSS
T ss_pred cCcCCcCCcCcCCCCCCC--C-EeECCCCCEEeECCCCeeECCCCCccCcCcc
Confidence 7621 24578753 3444 4 8999999999999999999999999987544
No 45
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=95.96 E-value=0.0027 Score=59.76 Aligned_cols=56 Identities=25% Similarity=0.575 Sum_probs=34.9
Q ss_pred hhc-CCCCCCCCCccCCcch-hhHhhhccCCCCCCceecCCCceeeeeCCCccceecCCeeeecC
Q 011244 394 ICA-GFQETTEPAICLSEDV-DECEEKLACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCISKD 456 (490)
Q Consensus 394 iC~-gf~~~~~p~~C~~~di-dEc~~~~~c~c~~~~c~nt~g~y~C~C~~~~~~~~~~~tC~~~~ 456 (490)
.|. ||. -..|.. +| |||... .+.|.. .|.|+.|+|.|.|+.||.+..++.+|.+..
T Consensus 66 ~C~~Gf~----G~~Ce~-~i~deC~~~-~~~C~~-~C~n~~gsy~C~C~~Gy~l~~dG~~C~~~~ 123 (195)
T 1nfu_B 66 TCLEGFE----GKNCEL-FTRKLCSLD-NGDCDQ-FCHEEQNSVVCSCARGYTLADNGKACIPTG 123 (195)
T ss_dssp --------------------CCGGGTG-GGGCSS-EEEEETTEEEEECCTTEEECTTSSCEEESS
T ss_pred eCCCCce----eccccc-cccccccCC-CCCCCC-EeECCCCCeEEECCCCceeCCCCCccccCC
Confidence 355 774 345873 47 999864 334445 899999999999999999988999998753
No 46
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=95.83 E-value=0.0031 Score=62.77 Aligned_cols=53 Identities=30% Similarity=0.760 Sum_probs=41.7
Q ss_pred hc-CCCCCCCCCccCCcchhhHhhh--ccCCCCCCceecCCCceeeeeCCCccceecCCeeeec
Q 011244 395 CA-GFQETTEPAICLSEDVDECEEK--LACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCISK 455 (490)
Q Consensus 395 C~-gf~~~~~p~~C~~~didEc~~~--~~c~c~~~~c~nt~g~y~C~C~~~~~~~~~~~tC~~~ 455 (490)
|. ||. -..|.. |||||... ..|+ . .|.|+.|+|.|.|..+|....++.+|.+.
T Consensus 30 C~~g~~----g~~C~~-~~~eC~~~~~~~C~--~-~C~~~~g~~~C~C~~g~~~~~~~~~C~~~ 85 (317)
T 3h5c_B 30 CSPGYE----GSNCEL-AKNECHPERTDGCQ--H-FCLPGQESYTCSCAQGYRLGEDHKQCVPH 85 (317)
T ss_dssp CSSSCC----SSSSCC-CSSSCCTTCTTSCS--S-EEECCSSSCEEECCTTEECCTTSSCCEEC
T ss_pred CCCCCc----CCcccc-CcccCCCCCCCCCc--C-ccccCCCeeEEeccccccccccccccccc
Confidence 44 774 346754 89999863 4554 4 89999999999999999998888899873
No 47
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=95.74 E-value=0.004 Score=54.69 Aligned_cols=57 Identities=25% Similarity=0.554 Sum_probs=35.0
Q ss_pred hhc-CCCCCCCCCccCCcch-hhHhhhccCCCCCCceecCCCceeeeeCCCccceecCCeeeecCC
Q 011244 394 ICA-GFQETTEPAICLSEDV-DECEEKLACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCISKDV 457 (490)
Q Consensus 394 iC~-gf~~~~~p~~C~~~di-dEc~~~~~c~c~~~~c~nt~g~y~C~C~~~~~~~~~~~tC~~~~~ 457 (490)
.|. ||. -..|.. +| |||... .+.|.. .|.|+.|+|.|.|+.||.+..++.+|.+...
T Consensus 66 ~C~~G~~----G~~C~~-~i~d~C~~~-~~~C~~-~C~~~~g~y~C~C~~Gy~l~~~g~~C~~~~~ 124 (134)
T 2vh0_B 66 TCLEGFE----GKNCEL-FTRKLCSLD-NGDCDQ-FCHEEQNSVVCSCARGYTLADNGKACIPTGP 124 (134)
T ss_dssp --------------------CCGGGTG-GGGCSS-EEEEETTEEEEECCTTEEECTTSSCEEESSS
T ss_pred eCCCCcc----CCcccc-CCCCccccC-CCCCCC-EeECCCCCEEEECCCCcEECCCCCccCcCCC
Confidence 354 774 346872 37 999864 233444 8999999999999999999889999987543
No 48
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=95.61 E-value=0.0041 Score=64.06 Aligned_cols=39 Identities=28% Similarity=0.685 Sum_probs=31.2
Q ss_pred hhHhhhccCCCCCCceecCCCceeeeeCCCccceecCCeeee
Q 011244 413 DECEEKLACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCIS 454 (490)
Q Consensus 413 dEc~~~~~c~c~~~~c~nt~g~y~C~C~~~~~~~~~~~tC~~ 454 (490)
|||... +|.|.. .|.||.|+|+|.|+.||.+ .++.+|.+
T Consensus 1 ~eC~~~-~~~c~~-~C~~~~~~y~C~C~~G~~~-~~~~~C~d 39 (400)
T 3p5b_L 1 NECLDN-NGGCSH-VCNDLKIGYECLCPDGFQL-VAQRRCED 39 (400)
T ss_dssp CCTTTT-GGGCSS-EEEECSSSEEEECCTTEEE-CSSSCEEE
T ss_pred CcccCC-CCCCCC-EeECCCCCeEEECCCCCCc-CCCCcccC
Confidence 688764 577765 8999999999999999987 46667754
No 49
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=95.61 E-value=0.0041 Score=45.96 Aligned_cols=33 Identities=24% Similarity=0.546 Sum_probs=26.6
Q ss_pred chhhHhhh--ccCCCCCCcee--cCCCceeeeeCCCcc
Q 011244 411 DVDECEEK--LACQCPECKCK--DTWGSYECSCGSGLL 444 (490)
Q Consensus 411 didEc~~~--~~c~c~~~~c~--nt~g~y~C~C~~~~~ 444 (490)
|||||... .+|+ .+..|. |+.++|.|.|+.||.
T Consensus 2 ~i~~C~~~~~~pC~-ngg~C~~~~~~~~~~C~C~~G~~ 38 (53)
T 1egf_A 2 SYPGCPSSYDGYCL-NGGVCMHIESLDSYTCNCVIGYS 38 (53)
T ss_dssp EECCCCTTSSCSSC-SSCEEEEESSSSCEEEECCTTCC
T ss_pred CcccCCCCCCCcCC-CCcEEEeeCCCCCEEEECCCCCc
Confidence 78999864 3454 446899 999999999999985
No 50
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=95.57 E-value=0.0047 Score=54.04 Aligned_cols=33 Identities=45% Similarity=0.909 Sum_probs=20.0
Q ss_pred chhhHhhh-ccCCCCCCceecCCCceeeeeCCCcc
Q 011244 411 DVDECEEK-LACQCPECKCKDTWGSYECSCGSGLL 444 (490)
Q Consensus 411 didEc~~~-~~c~c~~~~c~nt~g~y~C~C~~~~~ 444 (490)
|||||... .+|+ ....|.|+.|+|+|.|+.||.
T Consensus 4 dideC~~~~~~C~-~~g~C~~~~g~~~C~C~~Gy~ 37 (135)
T 2vj3_A 4 DVDECSLGANPCE-HAGKCINTLGSFECQCLQGYT 37 (135)
T ss_dssp CCCTTTSSSCSSS-TTCEEEECSSSEEEECCTTEE
T ss_pred ccccccCCCCCCC-CCCEeECCCCCEEEECCCCCc
Confidence 67777642 3444 334677777777777766654
No 51
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=95.35 E-value=0.005 Score=55.02 Aligned_cols=36 Identities=39% Similarity=0.721 Sum_probs=24.1
Q ss_pred CccCCcchhhHhhhccCCCCCCceecCCCceeeeeCCCcc
Q 011244 405 AICLSEDVDECEEKLACQCPECKCKDTWGSYECSCGSGLL 444 (490)
Q Consensus 405 ~~C~~~didEc~~~~~c~c~~~~c~nt~g~y~C~C~~~~~ 444 (490)
..|. |||||.. .+|+ ....|.|+.|+|.|.|+.||.
T Consensus 43 ~~c~--dideC~~-~pC~-n~g~C~~~~~~y~C~C~~G~~ 78 (146)
T 1x7a_L 43 KQYV--DGDQCEP-NPCL-NGGLCKDDINSYECWCQVGFE 78 (146)
T ss_dssp ---------CCSS-CSSC-TTCEEEECSSCEEEECCSSEE
T ss_pred ccCC--CcCcCCC-CCCC-CCCEeECCCCCEEEecCCCCc
Confidence 3577 9999984 4665 346899999999999999985
No 52
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=95.20 E-value=0.046 Score=50.99 Aligned_cols=99 Identities=15% Similarity=0.250 Sum_probs=61.7
Q ss_pred hhhhhhcccCCCCcchhhhHHHHhhhCCCcc-hhhhHHHHHHHHHH-hCCChhhcccccCCccCcccchHHHHHHHHHhc
Q 011244 284 ACFFKVANESRKPWLWWDYVTDFAIRCPMKE-KKYTKECAEQVIKS-LGVDLKKVDECVGDPEADVDNQVLKTEQDAQIG 361 (490)
Q Consensus 284 lCi~~~~~~~~~~~~WW~Yv~~f~~~C~~~~-~~y~~~C~~~v~~~-l~id~~ki~~C~~d~~~d~~n~iL~~e~~~q~~ 361 (490)
.|+++.... ++|+|.+..-..=.... ...+.+=-.+++++ +|+|.+++++|+.++.. .. .++++...-..
T Consensus 87 ~a~~~~~~~-----~f~~~~~aLf~~~~~~~~~~~~~~~L~~~a~~~~Gld~~~~~~~l~s~~~--~~-~v~~~~~~a~~ 158 (202)
T 3gha_A 87 EEVWKEDPD-----SFWDFHEKLFEKQPDTEQEWVTPGLLGDLAKSTTKIKPETLKENLDKETF--AS-QVEKDSDLNQK 158 (202)
T ss_dssp HHHHHHCGG-----GHHHHHHHHHHHCCSSSSCCCCHHHHHHHHHHHSSSCHHHHHHHHHHTTT--HH-HHHHHHHHHHH
T ss_pred HHHHhhCHH-----HHHHHHHHHHHhCccccccccCHHHHHHHHHHhcCCCHHHHHHHHhChHH--HH-HHHHHHHHHHH
Confidence 456555444 79999887433211111 11223445667888 89999999999975532 22 33433332212
Q ss_pred CCCCCCeEEecEEEEcCeeeeeccChhhHHHHh
Q 011244 362 KGSRGDVTILPTLVINNRQYRGKLDKGAVLKAI 394 (490)
Q Consensus 362 ~~~~~~~~~~Ptl~IN~~~yrg~l~~~~vl~~i 394 (490)
.+|...||++|||+.+.|..+.+.+..+|
T Consensus 159 ----~gV~gtPtfvvnG~~~~G~~~~e~l~~~i 187 (202)
T 3gha_A 159 ----MNIQATPTIYVNDKVIKNFADYDEIKETI 187 (202)
T ss_dssp ----TTCCSSCEEEETTEECSCTTCHHHHHHHH
T ss_pred ----cCCCcCCEEEECCEEecCCCCHHHHHHHH
Confidence 34788999999999999987776655544
No 53
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=95.10 E-value=0.37 Score=43.45 Aligned_cols=100 Identities=16% Similarity=0.162 Sum_probs=60.7
Q ss_pred hhhhhhcccCCCCcchhhhHHHHhhhCCC-cchhhhHHHHHHHHHHhCCChhh---ccccc--CCccCcccchHHHHHHH
Q 011244 284 ACFFKVANESRKPWLWWDYVTDFAIRCPM-KEKKYTKECAEQVIKSLGVDLKK---VDECV--GDPEADVDNQVLKTEQD 357 (490)
Q Consensus 284 lCi~~~~~~~~~~~~WW~Yv~~f~~~C~~-~~~~y~~~C~~~v~~~l~id~~k---i~~C~--~d~~~d~~n~iL~~e~~ 357 (490)
+|+.+...+ .+|+|.+..-..=.. .....+.+=-.++++++|+|.++ +.+|+ .++. ..+ .++++..
T Consensus 69 ~~a~~~~~~-----~~~~~~~~lf~~~~~~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~~--~~~-~v~~~~~ 140 (186)
T 3bci_A 69 HAVLMYAPK-----SFLDFQKQLFAAQQDENKEWLTKELLDKHIKQLHLDKETENKIIKDYKTKDSK--SWK-AAEKDKK 140 (186)
T ss_dssp HHHHHHCGG-----GHHHHHHHHHHTCCCTTSCCCCHHHHHHHHHTTCCCHHHHHHHHHHHHSTTCH--HHH-HHHHHHH
T ss_pred HHHHHhCHH-----HHHHHHHHHHhcCcccCCCCCCHHHHHHHHHHcCCCHHHHHHHHHHHHhcCHH--HHH-HHHHHHH
Confidence 455544333 588888765332111 11122345566788899999999 99998 5442 122 3443332
Q ss_pred HHhcCCCCCCeEEecEEEEcCeeeeeccChhhHHHHhh
Q 011244 358 AQIGKGSRGDVTILPTLVINNRQYRGKLDKGAVLKAIC 395 (490)
Q Consensus 358 ~q~~~~~~~~~~~~Ptl~IN~~~yrg~l~~~~vl~~iC 395 (490)
.-.. .++...||++|||+.+.|..+.+.+..+|=
T Consensus 141 ~a~~----~gv~GtPt~vvnG~~~~G~~~~~~l~~~i~ 174 (186)
T 3bci_A 141 IAKD----NHIKTTPTAFINGEKVEDPYDYESYEKLLK 174 (186)
T ss_dssp HHHH----TTCCSSSEEEETTEECSCTTCHHHHHHHHH
T ss_pred HHHH----cCCCCCCeEEECCEEcCCCCCHHHHHHHHH
Confidence 2112 347889999999999888777766665553
No 54
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=94.94 E-value=0.0065 Score=51.72 Aligned_cols=34 Identities=38% Similarity=0.816 Sum_probs=23.9
Q ss_pred chhhHhhhc---cCC--C-CCCceecCCCceeeeeCCCcc
Q 011244 411 DVDECEEKL---ACQ--C-PECKCKDTWGSYECSCGSGLL 444 (490)
Q Consensus 411 didEc~~~~---~c~--c-~~~~c~nt~g~y~C~C~~~~~ 444 (490)
|+|||...+ .|. | ....|.|+.|+|.|.|+.||.
T Consensus 5 d~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~~ 44 (114)
T 1aut_L 5 DGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWE 44 (114)
T ss_dssp ---CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTTEE
T ss_pred ecccccCCCccccccccCCCcCCCCCCCCCcEeeCCCCCc
Confidence 899998753 122 2 345799999999999999985
No 55
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=94.89 E-value=0.015 Score=63.88 Aligned_cols=47 Identities=28% Similarity=0.622 Sum_probs=36.2
Q ss_pred hhc-CCCCCCCCCccCCcchhhHhhh-ccCCCCCC---ceecCCCceeee-eCCCccc
Q 011244 394 ICA-GFQETTEPAICLSEDVDECEEK-LACQCPEC---KCKDTWGSYECS-CGSGLLY 445 (490)
Q Consensus 394 iC~-gf~~~~~p~~C~~~didEc~~~-~~c~c~~~---~c~nt~g~y~C~-C~~~~~~ 445 (490)
.|. ||. -....|. |||||... ..|+ ... .|+||.|+|+|. |+.||..
T Consensus 29 ~C~~Gyt--Gdg~~Ce--DiDEC~~~p~~C~-~gg~~~~CvNt~gsY~C~~C~~Gy~G 81 (634)
T 1yo8_A 29 FCPVGFL--GNGTHCE--DLDECALVPDICF-STSKVPRCVNTQPGFHCLPCPPRYRG 81 (634)
T ss_dssp CCCTTBC--SCSSSCC--BCCTTTTSCCCSC-CCSSSCCEEECSSSEEECCCCTTEEE
T ss_pred cCCCccC--CCCCCcc--ccccccCCCCccc-CCccccceeeccCceecccCCCCccc
Confidence 366 885 3457898 99999864 2366 344 799999999999 9999874
No 56
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=94.88 E-value=0.01 Score=52.47 Aligned_cols=32 Identities=38% Similarity=0.721 Sum_probs=27.1
Q ss_pred chhhHhhhccCCCCCCceecCCCceeeeeCCCcc
Q 011244 411 DVDECEEKLACQCPECKCKDTWGSYECSCGSGLL 444 (490)
Q Consensus 411 didEc~~~~~c~c~~~~c~nt~g~y~C~C~~~~~ 444 (490)
|||||.. .+|+ ....|.|+.|+|.|.|+.||.
T Consensus 46 did~C~~-~pC~-n~g~C~~~~g~y~C~C~~G~~ 77 (142)
T 2c4f_L 46 DGDQCAS-SPCQ-NGGSCKDQLQSYICFCLPAFE 77 (142)
T ss_dssp TCCGGGG-CCCC-TTCEEEEETTEEEEECCTTEE
T ss_pred ccCcCcC-CCcC-CCCEEeCCCCCEEeeCCCCcc
Confidence 9999985 4666 446899999999999999984
No 57
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=94.75 E-value=0.0052 Score=57.81 Aligned_cols=35 Identities=43% Similarity=0.863 Sum_probs=0.0
Q ss_pred ccCCcchhhHhhhccCCCCCCceecCCCceeeeeCCCcc
Q 011244 406 ICLSEDVDECEEKLACQCPECKCKDTWGSYECSCGSGLL 444 (490)
Q Consensus 406 ~C~~~didEc~~~~~c~c~~~~c~nt~g~y~C~C~~~~~ 444 (490)
.|. |||||.. .+|+ ....|+|+.|+|.|.|+.||.
T Consensus 38 ~c~--dideC~~-~pC~-ngg~C~n~~g~y~C~C~~Gf~ 72 (195)
T 1nfu_B 38 KYK--DGDQCET-SPCQ-NQGKCKDGLGEYTCTCLEGFE 72 (195)
T ss_dssp ---------------------------------------
T ss_pred cCC--CCcccCC-CCCC-CCCEeECCCCCeeEeCCCCce
Confidence 577 9999985 3666 445899999999999999985
No 58
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=94.50 E-value=0.016 Score=49.56 Aligned_cols=32 Identities=31% Similarity=0.746 Sum_probs=27.2
Q ss_pred chhhHhhhccCCCCCCceecC-CCceeeeeCCCccce
Q 011244 411 DVDECEEKLACQCPECKCKDT-WGSYECSCGSGLLYM 446 (490)
Q Consensus 411 didEc~~~~~c~c~~~~c~nt-~g~y~C~C~~~~~~~ 446 (490)
|||||. ..+|+ . .|+|+ .|+|+|.|+.||...
T Consensus 3 dideC~-~~pC~--~-~C~~~~~g~y~C~C~~Gy~g~ 35 (118)
T 1dx5_I 3 PVDPCF-RANCE--Y-QCQPLDQTSYLCVCAEGFAPI 35 (118)
T ss_dssp CCCGGG-GCCCS--S-EEEECSSSCEEEECCTTEEEE
T ss_pred ccccCC-CCCCC--C-CCCCCCCCCEEeECCCCcccc
Confidence 899996 45676 3 89999 999999999998765
No 59
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=94.27 E-value=0.0079 Score=52.80 Aligned_cols=35 Identities=43% Similarity=0.884 Sum_probs=0.0
Q ss_pred ccCCcchhhHhhhccCCCCCCceecCCCceeeeeCCCcc
Q 011244 406 ICLSEDVDECEEKLACQCPECKCKDTWGSYECSCGSGLL 444 (490)
Q Consensus 406 ~C~~~didEc~~~~~c~c~~~~c~nt~g~y~C~C~~~~~ 444 (490)
.|. |||||... +|+ ....|+|+.|+|.|.|+.||.
T Consensus 38 ~c~--d~d~C~~~-pC~-n~g~C~~~~~~y~C~C~~G~~ 72 (134)
T 2vh0_B 38 KYK--DGDQCETS-PCQ-NQGKCKDGLGEYTCTCLEGFE 72 (134)
T ss_dssp ---------------------------------------
T ss_pred cCC--CcCcCCCC-CCC-CcCCcccCCCCEEeeCCCCcc
Confidence 477 99999853 566 445899999999999999985
No 60
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=94.05 E-value=0.019 Score=43.00 Aligned_cols=33 Identities=21% Similarity=0.391 Sum_probs=25.1
Q ss_pred chhhHhhhccCCCCCCce-----ecCCCceeeeeCCCccc
Q 011244 411 DVDECEEKLACQCPECKC-----KDTWGSYECSCGSGLLY 445 (490)
Q Consensus 411 didEc~~~~~c~c~~~~c-----~nt~g~y~C~C~~~~~~ 445 (490)
+||||.. .+|+ .+..| .+..++|.|.|+.+|.-
T Consensus 7 ~~~eC~s-~pC~-NgGtC~~~~~~d~~~~y~C~C~~g~~G 44 (55)
T 3u7u_G 7 KCAEKEK-TFCV-NGGECFMVKDLSNPSRYLCKCPNEFTG 44 (55)
T ss_dssp ECCSTTT-TTSC-TTCEEEEECCC--CCCEEEEECTTEES
T ss_pred cCCCCcC-CCCC-CCCCcCCCCccCCCCCEeEeCCCCCcC
Confidence 7999985 4777 56689 57889999999988753
No 61
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=94.00 E-value=0.022 Score=56.25 Aligned_cols=43 Identities=23% Similarity=0.632 Sum_probs=32.6
Q ss_pred chhhHhhh--ccCCCCCCceecCC------CceeeeeCCCccceecCCeeee
Q 011244 411 DVDECEEK--LACQCPECKCKDTW------GSYECSCGSGLLYMQEHDTCIS 454 (490)
Q Consensus 411 didEc~~~--~~c~c~~~~c~nt~------g~y~C~C~~~~~~~~~~~tC~~ 454 (490)
+.|+|... ..-.|+. .|.++. ++|.|.|+.||.+..|++||+.
T Consensus 266 ~~n~C~~~~~~ng~Cs~-~C~~~p~~~~~~~~~~C~C~~g~~l~~d~~~C~~ 316 (316)
T 1ijq_A 266 GVNWCERTTLSNGGCQY-LCLPAPQINPHSPKFTCACPDGMLLARDMRSCLT 316 (316)
T ss_dssp CCCTTSSSSSGGGGCSS-EEEECCCCSTTCCSEEEECCTTCEECTTSSCEEC
T ss_pred ccccccccccCCCCcCc-ccCCCccccCCCCCeEeeCCCCCEECCCCCccCC
Confidence 56788753 0112433 799885 6999999999999999999974
No 62
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=93.63 E-value=0.093 Score=46.79 Aligned_cols=86 Identities=10% Similarity=0.160 Sum_probs=56.8
Q ss_pred chhhhHHHHhhhCCCcchhhhHHHHHHHHHHhCCChhhcccccCCccCcccchHHHHHHHHHhcCCCCCCeEEecEEEEc
Q 011244 298 LWWDYVTDFAIRCPMKEKKYTKECAEQVIKSLGVDLKKVDECVGDPEADVDNQVLKTEQDAQIGKGSRGDVTILPTLVIN 377 (490)
Q Consensus 298 ~WW~Yv~~f~~~C~~~~~~y~~~C~~~v~~~l~id~~ki~~C~~d~~~d~~n~iL~~e~~~q~~~~~~~~~~~~Ptl~IN 377 (490)
.+|+|.+.+-.. . ...+.+=-.++++++|+|..++++|+.++.. .. .++++...-.. .++...||++||
T Consensus 83 ~~~~~~~~lf~~---~-~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~--~~-~v~~~~~~a~~----~gv~gtPt~~i~ 151 (175)
T 3gyk_A 83 KYEAFHWALMGM---S-GKANETGVLRIAREVGLDTEQLQRDMEAPEV--TA-HIAQSMALAQK----LGFNGTPSFVVE 151 (175)
T ss_dssp CHHHHHHHHHTC---S-SCCSHHHHHHHHHHTTCCHHHHHHHTTCHHH--HH-HHHHHHHHHHH----HTCCSSSEEEET
T ss_pred HHHHHHHHHHhc---C-CCCCHHHHHHHHHHcCCCHHHHHHHHhChHH--HH-HHHHHHHHHHH----cCCccCCEEEEC
Confidence 478887765332 1 2334555677899999999999999975531 22 33333322112 337889999999
Q ss_pred CeeeeeccChhhHHHHh
Q 011244 378 NRQYRGKLDKGAVLKAI 394 (490)
Q Consensus 378 ~~~yrg~l~~~~vl~~i 394 (490)
|+.+.|..+.+.+...|
T Consensus 152 g~~~~G~~~~~~l~~~i 168 (175)
T 3gyk_A 152 DALVPGFVEQSQLQDAV 168 (175)
T ss_dssp TEEECSCCCHHHHHHHH
T ss_pred CEEeeCCCCHHHHHHHH
Confidence 99999988776655443
No 63
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=92.93 E-value=0.037 Score=60.59 Aligned_cols=42 Identities=21% Similarity=0.523 Sum_probs=35.7
Q ss_pred chhhHhhh-ccCCCCCCceecCC-CceeeeeCCCccceecCCeeeec
Q 011244 411 DVDECEEK-LACQCPECKCKDTW-GSYECSCGSGLLYMQEHDTCISK 455 (490)
Q Consensus 411 didEc~~~-~~c~c~~~~c~nt~-g~y~C~C~~~~~~~~~~~tC~~~ 455 (490)
++|||... ..|+ ..|.|+. |+|.|.|+.||.+..++++|...
T Consensus 264 ~~n~C~~~ng~C~---~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~ 307 (628)
T 4a0p_A 264 GWNECASSNGHCS---HLCLAVPVGGFVCGCPAHYSLNADNRTCSAP 307 (628)
T ss_dssp CCCTTTTTGGGCS---SEEEEETTTEEEEECSTTCEECTTSSCEECC
T ss_pred cceEeccCCCCcc---hhhhcCCCCCeeEEcCCCcEecccCCcCccc
Confidence 57899864 4555 3799999 99999999999999999999864
No 64
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=92.73 E-value=0.038 Score=48.16 Aligned_cols=39 Identities=26% Similarity=0.658 Sum_probs=30.2
Q ss_pred CCccCCcchhhHhhhccCCCCCCceecCCCceeeeeCCCccc
Q 011244 404 PAICLSEDVDECEEKLACQCPECKCKDTWGSYECSCGSGLLY 445 (490)
Q Consensus 404 p~~C~~~didEc~~~~~c~c~~~~c~nt~g~y~C~C~~~~~~ 445 (490)
-..|.. |||||.. .+|+. ...|.|+.|+|+|.|+.||.-
T Consensus 90 G~~C~~-~i~~C~~-~~C~~-~~~C~~~~g~~~C~C~~G~~G 128 (143)
T 4d90_A 90 GIHCQH-NINECEV-EPCKN-GGICTDLVANYSCECPGEFMG 128 (143)
T ss_dssp STTSCE-ECCTTTT-CCSCT-TCEEEEETTEEEEECCTTCBS
T ss_pred CCCccc-CCCcCCC-CCCCC-CCEeECCCCCeEeECCCCCcc
Confidence 345743 8999984 46663 458999999999999999864
No 65
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=92.58 E-value=0.056 Score=47.66 Aligned_cols=55 Identities=22% Similarity=0.518 Sum_probs=39.3
Q ss_pred hc-CCCCCCCCCccCCcchhhHhh----hccCCCCCCceecCCC-ceeeeeCCCccceecCCeeeecCC
Q 011244 395 CA-GFQETTEPAICLSEDVDECEE----KLACQCPECKCKDTWG-SYECSCGSGLLYMQEHDTCISKDV 457 (490)
Q Consensus 395 C~-gf~~~~~p~~C~~~didEc~~----~~~c~c~~~~c~nt~g-~y~C~C~~~~~~~~~~~tC~~~~~ 457 (490)
|. ||. -..|.. ++++|.. ...|+ . .|.|+.| +|.|.|+.||.+..++.+|.+...
T Consensus 72 C~~G~~----G~~C~~-~~~~c~~c~~~~~~C~--~-~C~~~~g~~y~C~C~~Gy~l~~dG~~C~~~~e 132 (142)
T 2c4f_L 72 CLPAFE----GRNCET-HKDDQLICVNENGGCE--Q-YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVE 132 (142)
T ss_dssp CCTTEE----STTSCE-EGGGCCSTTTGGGGCS--S-EEECCTTSCCEEECCTTEEECTTSSCEEESSS
T ss_pred CCCCcc----CCcccc-CccccccccCCCCCcc--C-EeECCCCCCEEEECCCCceECCCCCCCCCCCc
Confidence 55 673 345763 3777632 12233 2 7999999 999999999999889999987543
No 66
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=92.20 E-value=0.073 Score=49.95 Aligned_cols=67 Identities=16% Similarity=0.284 Sum_probs=44.8
Q ss_pred HHHHHHHhCCChhhcccccCCccCcccchHHHHHHHHHhcCCCCCCeEEecEEEEcCeeeeeccChhhHHHHh
Q 011244 322 AEQVIKSLGVDLKKVDECVGDPEADVDNQVLKTEQDAQIGKGSRGDVTILPTLVINNRQYRGKLDKGAVLKAI 394 (490)
Q Consensus 322 ~~~v~~~l~id~~ki~~C~~d~~~d~~n~iL~~e~~~q~~~~~~~~~~~~Ptl~IN~~~yrg~l~~~~vl~~i 394 (490)
-.+++.++|+|.+++++|+.++. ....|.+..+.+... .+|...||++|||+.+.|..+.+.+..+|
T Consensus 126 L~~~a~~~Gld~~~~~~~l~s~~--~~~~v~~~~~~a~~~----~GV~GtPtfvvng~~~~G~~~~e~l~~~i 192 (205)
T 3gmf_A 126 FYDFMAARGMDRSTLDRCLSNEA--LAKKLAAETDEAINQ----YNVSGTPSFMIDGILLAGTHDWASLRPQI 192 (205)
T ss_dssp HHHHHHTTTCCHHHHHHHHTCHH--HHHHHHHHHHHHHHH----HCCCSSSEEEETTEECTTCCSHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHcCHH--HHHHHHHHHHHHHHH----cCCccCCEEEECCEEEeCCCCHHHHHHHH
Confidence 34566788999999999997542 122333332222011 23788899999999999988877655544
No 67
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=92.11 E-value=0.053 Score=59.56 Aligned_cols=45 Identities=22% Similarity=0.569 Sum_probs=34.6
Q ss_pred CCccCCcchhhHhhh-ccCCCCCCceecCC----CceeeeeCCCccceecCCeee
Q 011244 404 PAICLSEDVDECEEK-LACQCPECKCKDTW----GSYECSCGSGLLYMQEHDTCI 453 (490)
Q Consensus 404 p~~C~~~didEc~~~-~~c~c~~~~c~nt~----g~y~C~C~~~~~~~~~~~tC~ 453 (490)
...|. |||||... ..|+ ....|+|+. |+|+|.|+.||.- ++.+|.
T Consensus 96 g~~C~--dideC~~~~~pC~-~~~~Cvnt~~~~~GsY~C~C~~Gy~G--dG~~Ce 145 (634)
T 1yo8_A 96 KQVCE--PENPCKDKTHNCH-KHAECIYLGHFSDPMYKCECQTGYAG--DGLICG 145 (634)
T ss_dssp CCCEE--ECCTTTTTCCCCC-TTEEEEECCTTCSSSEEEEECTTEEE--SSSSEE
T ss_pred CCccc--ccccccCCCcccc-cCccccccccccccceeeeccCCccc--cCcccc
Confidence 34688 99999874 5666 456899999 9999999999863 445554
No 68
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=91.58 E-value=0.065 Score=49.11 Aligned_cols=57 Identities=25% Similarity=0.685 Sum_probs=39.6
Q ss_pred hc-CCCCCC-CCCccCCcchhhHhhhccC-CCCCCceecCCCceeeeeCCCccceecCCeeee
Q 011244 395 CA-GFQETT-EPAICLSEDVDECEEKLAC-QCPECKCKDTWGSYECSCGSGLLYMQEHDTCIS 454 (490)
Q Consensus 395 C~-gf~~~~-~p~~C~~~didEc~~~~~c-~c~~~~c~nt~g~y~C~C~~~~~~~~~~~tC~~ 454 (490)
|. ||.-.. ....|...|+|||.. .| + ....|+|+.|+|+|.|+.||.....+.+...
T Consensus 120 C~~Gy~g~~~~~~~C~~~~~~~C~~--~C~~-~~~~C~n~~g~y~C~C~~G~~g~~~~~~~~~ 179 (186)
T 1z1y_A 120 CAIGXVPNPEDEXXCTXTGETACQL--XCNT-DNEVCXNVEGVYXCQCMEGFTFDXEXNVCLG 179 (186)
T ss_dssp ECTEEEEETTTTTEEEEEECCCCCC--CCCT-TTEEEEEETTEEEEEECTTCEEETTTTEEES
T ss_pred CCCCCcccCCCCCcceEcCCCcccc--cccc-cCcceecCCCCeeeECCCCCccCcccccCCc
Confidence 65 775211 336788222489984 56 3 4568999999999999999988776665443
No 69
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=90.63 E-value=0.11 Score=56.81 Aligned_cols=41 Identities=24% Similarity=0.576 Sum_probs=34.4
Q ss_pred chhhHhhh-ccCCCCCCceecCCCceeeeeCCCccceecCCeeee
Q 011244 411 DVDECEEK-LACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCIS 454 (490)
Q Consensus 411 didEc~~~-~~c~c~~~~c~nt~g~y~C~C~~~~~~~~~~~tC~~ 454 (490)
-.|+|... ..|+ -.|.++.|+|.|.|+.||.+..|+.||+.
T Consensus 577 ~~~~C~~~ng~C~---~~C~~~~~~~~C~C~~g~~l~~d~~~C~~ 618 (619)
T 3s94_A 577 GSNPCAEENGGCS---HLCLYRPQGLRCACPIGFELISDMKTCIV 618 (619)
T ss_dssp CCCGGGSGGGGCS---SEEEEETTEEEEECCTTCEECSSTTCEEC
T ss_pred ccccCCCCCCChh---HhhccCCCCeEEECCCCCEECCCCCcCCC
Confidence 36889764 4554 37999999999999999999999999984
No 70
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=90.37 E-value=0.079 Score=52.41 Aligned_cols=32 Identities=25% Similarity=0.688 Sum_probs=24.8
Q ss_pred chhhHhhhccCCCCCCceecCCCceeeeeCCCcc
Q 011244 411 DVDECEEKLACQCPECKCKDTWGSYECSCGSGLL 444 (490)
Q Consensus 411 didEc~~~~~c~c~~~~c~nt~g~y~C~C~~~~~ 444 (490)
|+|||... +|+ ....|.|+.++|.|.|+.||.
T Consensus 4 d~~~C~~~-pC~-~~g~C~~~~~~~~C~C~~g~~ 35 (317)
T 3h5c_B 4 GGSPCISQ-PCL-HNGSCQDSIWGYTCTCSPGYE 35 (317)
T ss_dssp --CCTTSC-CCT-TTCCCCCCSSSCCCCCSSSCC
T ss_pred cCCcCCCC-CCC-CCCEeECCCCCeEEECCCCCc
Confidence 88999864 565 345799999999999999875
No 71
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=90.17 E-value=0.11 Score=45.22 Aligned_cols=43 Identities=35% Similarity=0.857 Sum_probs=31.4
Q ss_pred hc-CCCCCCCCCccCCcchhhHhhhccCCCCCCceecCCCceeeeeCCCcc
Q 011244 395 CA-GFQETTEPAICLSEDVDECEEKLACQCPECKCKDTWGSYECSCGSGLL 444 (490)
Q Consensus 395 C~-gf~~~~~p~~C~~~didEc~~~~~c~c~~~~c~nt~g~y~C~C~~~~~ 444 (490)
|. ||. -+.|.. |||||.. .+|+ ....|.|+.|+|+|.|+.||.
T Consensus 32 C~~Gy~----G~~C~~-~~~~C~~-~~C~-~~~~C~~~~g~~~C~C~~G~~ 75 (135)
T 2vj3_A 32 CLQGYT----GPRCEI-DVNECVS-NPCQ-NDATCLDQIGEFQCICMPGYE 75 (135)
T ss_dssp CCTTEE----STTSCE-ECCTTTT-CCCC-SSCEEEECSSCEEEECCTTEE
T ss_pred CCCCCc----CCcccc-cCccCCC-CCCC-CCCEEeCCCCCceeeCCCCCc
Confidence 55 664 235632 8999985 3565 345899999999999999976
No 72
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=90.06 E-value=0.089 Score=58.22 Aligned_cols=40 Identities=28% Similarity=0.650 Sum_probs=30.4
Q ss_pred chhhHhhhccCCCCCCceecCCCceeeeeCCCccceecCCeee
Q 011244 411 DVDECEEKLACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCI 453 (490)
Q Consensus 411 didEc~~~~~c~c~~~~c~nt~g~y~C~C~~~~~~~~~~~tC~ 453 (490)
|+|||... ...|. ..|.||.|+|+|.|+.||.+ .++.+|.
T Consensus 293 ~~~eC~~~-~~~C~-~~C~~~~~~~~C~C~~G~~~-~~~~~C~ 332 (699)
T 1n7d_A 293 GTNECLDN-NGGCS-HVCNDLKIGYECLCPDGFQL-VAQRRCE 332 (699)
T ss_dssp CCCCTTSS-TTTSC-TTCCCCTTCCCCCCCSSSCC-CSSSCCC
T ss_pred cccccccc-ccCcC-CCcccCCCCcEEeCCCCeEc-CCCCccc
Confidence 58999864 22343 37999999999999999987 4555664
No 73
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=89.99 E-value=0.12 Score=58.15 Aligned_cols=41 Identities=27% Similarity=0.652 Sum_probs=30.7
Q ss_pred chhhHhhhccCCCCCCceecCCCceeeeeCCCccceecCCeeee
Q 011244 411 DVDECEEKLACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCIS 454 (490)
Q Consensus 411 didEc~~~~~c~c~~~~c~nt~g~y~C~C~~~~~~~~~~~tC~~ 454 (490)
++|||... .+.|.. .|.||.|||.|.|+.||.+ .++.+|.+
T Consensus 311 ~~~~C~~~-~~~C~~-~C~~~~~~y~C~C~~Gy~l-~~g~~C~d 351 (791)
T 3m0c_C 311 GTNECLDN-NGGCSH-VCNDLKIGYECLCPDGFQL-VAQRRCED 351 (791)
T ss_dssp SCCSTTTG-GGGCSS-EEEECSBSEEEECCTTCEE-ETTTEEEC
T ss_pred cccccccc-ccCccc-cccCCCCCcccCCCCCCcc-CCCCcccc
Confidence 36788753 333433 7999999999999999987 56677754
No 74
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=89.82 E-value=0.13 Score=47.13 Aligned_cols=53 Identities=25% Similarity=0.636 Sum_probs=36.0
Q ss_pred hc-CCCCCCCCCccCCcchhhHhhhccCCCCCCcee----cCCCceeeeeCCCcccee-cCCeeee
Q 011244 395 CA-GFQETTEPAICLSEDVDECEEKLACQCPECKCK----DTWGSYECSCGSGLLYMQ-EHDTCIS 454 (490)
Q Consensus 395 C~-gf~~~~~p~~C~~~didEc~~~~~c~c~~~~c~----nt~g~y~C~C~~~~~~~~-~~~tC~~ 454 (490)
|. ||. -..-.|. ||||... +|+ ....|. |+.|+|+|.|+.||.... ++.+|.+
T Consensus 78 C~~G~~--g~~~~C~---~d~C~~~-~C~-~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~ 136 (186)
T 1z1y_A 78 CIEGYT--LXEDTCV---LDVCQYX-NCG-ESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTX 136 (186)
T ss_dssp ECTTEE--EETTEEE---EGGGTTC-CCC-TTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEE
T ss_pred CCCCCc--cCCCCCC---CCcCcCC-CCC-CCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceE
Confidence 65 775 2222444 7999865 454 355788 999999999999987643 4455654
No 75
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=89.74 E-value=0.23 Score=45.73 Aligned_cols=67 Identities=18% Similarity=0.206 Sum_probs=45.6
Q ss_pred HHHHHHHHhCCChhhcccccCCccCcccchHHHHHHHHHhcCCCCCCeEEecEEEEcCeeeeeccChhhHHHHh
Q 011244 321 CAEQVIKSLGVDLKKVDECVGDPEADVDNQVLKTEQDAQIGKGSRGDVTILPTLVINNRQYRGKLDKGAVLKAI 394 (490)
Q Consensus 321 C~~~v~~~l~id~~ki~~C~~d~~~d~~n~iL~~e~~~q~~~~~~~~~~~~Ptl~IN~~~yrg~l~~~~vl~~i 394 (490)
=-.++++++|+|.+++.+|+.++.. .. .++++...-.. .++...|+++|||+.+.|....+.+..+|
T Consensus 125 ~L~~~a~~~Gld~~~~~~~~~s~~~--~~-~v~~~~~~a~~----~Gv~G~Ptfvi~g~~~~G~~~~~~l~~~l 191 (203)
T 2imf_A 125 LPALVSEKLGWDRSAFEHFLSSNAA--TE-RYDEQTHAAIE----RKVFGVPTMFLGDEMWWGNDRLFMLESAM 191 (203)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHSHHH--HH-HHHHHHHHHHH----TTCCSSSEEEETTEEEESGGGHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHhcCHHH--HH-HHHHHHHHHHH----CCCCcCCEEEECCEEEECCCCHHHHHHHH
Confidence 3456788899999999999875522 22 33333322212 34788999999999999987666555444
No 76
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=89.74 E-value=0.22 Score=45.75 Aligned_cols=65 Identities=17% Similarity=0.109 Sum_probs=44.1
Q ss_pred HHHHHHHHHHh-CCChhhcccccCCccCcccchHHHHHHHHHhcCCCCCCeEEecEEEEcCeeeeeccChhhH
Q 011244 319 KECAEQVIKSL-GVDLKKVDECVGDPEADVDNQVLKTEQDAQIGKGSRGDVTILPTLVINNRQYRGKLDKGAV 390 (490)
Q Consensus 319 ~~C~~~v~~~l-~id~~ki~~C~~d~~~d~~n~iL~~e~~~q~~~~~~~~~~~~Ptl~IN~~~yrg~l~~~~v 390 (490)
.+=-.+++.++ |+|.+++++|+.++. ....++++...-.. .++...||++|||+.+.|..+.+..
T Consensus 109 ~~~l~~~a~~~~Gld~~~~~~~~~s~~---~~~~v~~~~~~a~~----~gv~gtPt~vvng~~~~~~~~~e~l 174 (193)
T 3hz8_A 109 PEVLKKWLGEQTAFDGKKVLAAYESPE---SQARADKMQELTET----FQIDGVPTVIVGGKYKVEFADWESG 174 (193)
T ss_dssp HHHHHHHHHHCTTTTHHHHHHHHHSHH---HHHHHHHHHHHHHH----TTCCSSSEEEETTTEEECCSSHHHH
T ss_pred HHHHHHHHHHccCCCHHHHHHHHcCHH---HHHHHHHHHHHHHH----hCCCcCCEEEECCEEEecCCCHHHH
Confidence 44556788889 999999999996553 22233433332212 3478899999999999987654443
No 77
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=88.91 E-value=0.12 Score=42.12 Aligned_cols=42 Identities=26% Similarity=0.693 Sum_probs=31.2
Q ss_pred ccCCcchhhHhhhccCCCCCCceecCC--CceeeeeCCCccceecCCeee
Q 011244 406 ICLSEDVDECEEKLACQCPECKCKDTW--GSYECSCGSGLLYMQEHDTCI 453 (490)
Q Consensus 406 ~C~~~didEc~~~~~c~c~~~~c~nt~--g~y~C~C~~~~~~~~~~~tC~ 453 (490)
.|...|+|||... +|+ ....|.|+. |+|.|.|+.||. +..|.
T Consensus 42 ~C~~~~~~~C~~~-pC~-ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce 85 (91)
T 1tpg_A 42 QCHSVPVKSCSEP-RCF-NGGTCQQALYFSDFVCQCPEGFA----GKSCE 85 (91)
T ss_dssp BCCEECEEECSSC-CSC-TTCEEEEESSSSCEEEECCTTCB----SSSCC
T ss_pred ccccCcCCcccCC-CCC-CCCEeecCCCCCCeEeECCCCCc----CCcCC
Confidence 6742279999853 565 446899998 999999999984 45563
No 78
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=88.85 E-value=0.48 Score=51.72 Aligned_cols=63 Identities=11% Similarity=0.125 Sum_probs=51.0
Q ss_pred CCCCeEEEEecCCCCHHHHHHHHHhcCCcEEEEEeCCCCCceecCCCCCccccccccCCcceeEEEEehhhHHHHHHHHh
Q 011244 87 GGLPTFLLVDRGDCYFTLKAWNAQKGGAAAILVADDKTEPLITMDTPEEENADAEYLQNITIPSALISKSLGDSIKKSLS 166 (490)
Q Consensus 87 ~~~g~IvLV~RG~CsF~~Kv~nAQ~aGA~aVII~nn~~~~l~tM~~p~d~~~~~~~~~~i~IPsv~Isk~~G~~L~~~l~ 166 (490)
..+++|+|.+|+ |..|..+++.+||.++|++++..+. .....+|+++|+..+|..|+..+.
T Consensus 279 ~v~gkivl~~~~---~~~~~~~~~~~Ga~gvi~~~~~~~~----------------~~~~~lP~~~v~~~~g~~i~~~~~ 339 (621)
T 3vta_A 279 LLKGKIVVCEAS---FGPHEFFKSLDGAAGVLMTSNTRDY----------------ADSYPLPSSVLDPNDLLATLRYIY 339 (621)
T ss_dssp GTTTSEEECSSC---CCHHHHHHHHTTCSEEEEECSCCSS----------------CCCCSSSEEEECHHHHHHHHHHHH
T ss_pred cccceEEEEecC---CChhHHhhhhcceeEEEEEecCCCc----------------ccccccceEEECHHHHHHHHHHHh
Confidence 467999998765 6789999999999999999875321 123578999999999999999887
Q ss_pred CC
Q 011244 167 GG 168 (490)
Q Consensus 167 ~g 168 (490)
..
T Consensus 340 ~~ 341 (621)
T 3vta_A 340 SI 341 (621)
T ss_dssp HH
T ss_pred cc
Confidence 54
No 79
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=88.85 E-value=0.13 Score=36.75 Aligned_cols=32 Identities=19% Similarity=0.479 Sum_probs=24.3
Q ss_pred chhhHhhh--ccCCCCCCceecCC--CceeeeeCCCcc
Q 011244 411 DVDECEEK--LACQCPECKCKDTW--GSYECSCGSGLL 444 (490)
Q Consensus 411 didEc~~~--~~c~c~~~~c~nt~--g~y~C~C~~~~~ 444 (490)
+||||... .+|+ .-.|++.. ++|.|.|+.||.
T Consensus 2 ~i~~C~~~~~~pC~--nG~C~~~~~~~~~~C~C~~Gyt 37 (46)
T 1k36_A 2 SITKCSSDMNGYCL--HGQCIYLVDMSQNYCRCEVGYT 37 (46)
T ss_dssp CEECCCTTCCSSCS--SEEEEEETTTTEEEEEECTTCS
T ss_pred ccccCCCCCCCCCC--CCEeeccCCCCCEEEECCCCCc
Confidence 68889874 4565 24898755 799999999985
No 80
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=88.64 E-value=0.27 Score=45.45 Aligned_cols=92 Identities=8% Similarity=0.095 Sum_probs=56.8
Q ss_pred chhhhHHHHhhhCCCcc-hhhhHHHHHHHHHHhCCChhhcccccCCccCcccchHHHHHHHHHhcCCCCCCeEEecEEEE
Q 011244 298 LWWDYVTDFAIRCPMKE-KKYTKECAEQVIKSLGVDLKKVDECVGDPEADVDNQVLKTEQDAQIGKGSRGDVTILPTLVI 376 (490)
Q Consensus 298 ~WW~Yv~~f~~~C~~~~-~~y~~~C~~~v~~~l~id~~ki~~C~~d~~~d~~n~iL~~e~~~q~~~~~~~~~~~~Ptl~I 376 (490)
+.|+|....-..-.... +..+.+=-.+++.++|+|.+++.+++.++.. .. .|+++...-.. .++...|+++|
T Consensus 107 ~~~~~~~alf~a~~~~g~~i~~~~~L~~~a~~~Gld~~~~~~~~~s~~~--~~-~v~~~~~~a~~----~Gv~GvPtfvv 179 (202)
T 3fz5_A 107 AATAFAQRVFDLYFSDRLDTASPEAVSRLGPEVGLEPEALLAGIADPAL--KE-TVRKIGEDAVA----RGIFGSPFFLV 179 (202)
T ss_dssp HHHHHHHHHHHHHTTTCCCTTCHHHHHTTHHHHTCCHHHHHHHTTCHHH--HH-HHHHHHHHHHH----TTCCSSSEEEE
T ss_pred HHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHcCCCHHHHHHHhcCHHH--HH-HHHHHHHHHHH----CCCCcCCEEEE
Confidence 35666666543211111 1122455567778899999999999865421 22 33333322222 24888999999
Q ss_pred cCeeeeeccChhhHHHHhhc
Q 011244 377 NNRQYRGKLDKGAVLKAICA 396 (490)
Q Consensus 377 N~~~yrg~l~~~~vl~~iC~ 396 (490)
||+.+.|....+.+..+|-.
T Consensus 180 ~g~~~~G~~~~~~l~~~l~~ 199 (202)
T 3fz5_A 180 DDEPFWGWDRMEMMAEWIRT 199 (202)
T ss_dssp TTEEEESGGGHHHHHHHHHT
T ss_pred CCEEEecCCCHHHHHHHHhc
Confidence 99999998776666666543
No 81
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=88.63 E-value=0.19 Score=49.86 Aligned_cols=42 Identities=21% Similarity=0.563 Sum_probs=31.9
Q ss_pred hhhHhhh-ccCCCCCCceecCCC--ceeeeeCCCccceecCCeeeecC
Q 011244 412 VDECEEK-LACQCPECKCKDTWG--SYECSCGSGLLYMQEHDTCISKD 456 (490)
Q Consensus 412 idEc~~~-~~c~c~~~~c~nt~g--~y~C~C~~~~~~~~~~~tC~~~~ 456 (490)
.|+|... ..|+ . .|.++.+ +|.|.|+.||.+..|+++|.+..
T Consensus 267 ~n~C~~~ng~Cs--~-~C~~~~~~~~~~C~C~~g~~l~~d~~~c~~~~ 311 (318)
T 3sov_A 267 TNPCGIDNGGCS--H-LCLMSPVKPFYQCACPTGVKLLENGKTCKDGN 311 (318)
T ss_dssp CCTTTTTGGGCS--S-EEEECSSTTSEEEECSTTCCBCTTSSCBCC--
T ss_pred ccccccCCCCcc--e-EEecCCCCCCeEEECCCCCEECCCCCCCCCCC
Confidence 3567653 4554 3 6999876 79999999999999999998754
No 82
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=88.30 E-value=0.23 Score=44.97 Aligned_cols=38 Identities=29% Similarity=0.717 Sum_probs=29.8
Q ss_pred CccCCcchhhHhhhccCCCCCCceecC-CCceeeeeCCCcc
Q 011244 405 AICLSEDVDECEEKLACQCPECKCKDT-WGSYECSCGSGLL 444 (490)
Q Consensus 405 ~~C~~~didEc~~~~~c~c~~~~c~nt-~g~y~C~C~~~~~ 444 (490)
..|.. |||||....+|+ ....|.|+ .|+|+|.|+.||.
T Consensus 125 ~~C~~-~~~~C~~~~~C~-~~g~C~~~~~~~~~C~C~~G~~ 163 (169)
T 2vj2_A 125 QLCDK-DLNYCGTHQPCL-NGGTCSNTGPDKYQCSCPEGYS 163 (169)
T ss_dssp TTTCE-ESCHHHHTCCCC-TTCEEEECSTTCEEEECCTTCC
T ss_pred CcccC-CCCCCCCCCCCC-CCCEEcCCCCCCcEeECCCCCc
Confidence 45754 799998755665 44689998 8999999999985
No 83
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=87.75 E-value=0.27 Score=46.71 Aligned_cols=83 Identities=8% Similarity=0.191 Sum_probs=49.2
Q ss_pred chhhhHHHHhhh-CCC-cchhhhHHHHHHHHHHhCCChhhcccccCCccCcccchHHHHHHHHHhcCCCCCCeEEecEEE
Q 011244 298 LWWDYVTDFAIR-CPM-KEKKYTKECAEQVIKSLGVDLKKVDECVGDPEADVDNQVLKTEQDAQIGKGSRGDVTILPTLV 375 (490)
Q Consensus 298 ~WW~Yv~~f~~~-C~~-~~~~y~~~C~~~v~~~l~id~~ki~~C~~d~~~d~~n~iL~~e~~~q~~~~~~~~~~~~Ptl~ 375 (490)
++|+|.+..-.. =.. ..+..+.+=-.++.+++|+|.+++++|+.++.. .. .++++...-.. ..+|...||++
T Consensus 103 ~f~~~~~aLF~~q~~~~~~~~~~~~~L~~iA~~~Gld~~~~~~~l~s~~~--~~-~v~~~~~~a~~---~~GV~GtPtfv 176 (226)
T 3f4s_A 103 DYFNFNKAVFNSIDSWNYYNLSDLTLLQRIAALSNLKQDAFNQCINDKKI--MD-KIVNDKSLAIN---KLGITAVPIFF 176 (226)
T ss_dssp HHHHHHHHHHHTGGGSCSSSTTCCHHHHHHHHHTTCCHHHHHHHHTCHHH--HH-HHHHHHHHHHH---HHCCCSSCEEE
T ss_pred HHHHHHHHHHHhCHhhcccccCcHHHHHHHHHHcCCCHHHHHHHHhCHHH--HH-HHHHHHHHHHH---HcCCCcCCEEE
Confidence 577777654322 100 000112334556788999999999999965421 22 33333322112 02378889999
Q ss_pred E---cCeeeeeccC
Q 011244 376 I---NNRQYRGKLD 386 (490)
Q Consensus 376 I---N~~~yrg~l~ 386 (490)
| ||+.+.|..+
T Consensus 177 v~~~nG~~~~Ga~~ 190 (226)
T 3f4s_A 177 IKLNDDKSYIEHNK 190 (226)
T ss_dssp EEECCTTCCCCGGG
T ss_pred EEcCCCEEeeCCCC
Confidence 9 9999988877
No 84
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=87.60 E-value=0.3 Score=44.00 Aligned_cols=64 Identities=17% Similarity=0.229 Sum_probs=41.5
Q ss_pred HHHHHHHHHHhCCChhhcccccCCccCcccchHHHHHHHHHhcCCCCCCeEEecEEEEcCeee-eeccChhhH
Q 011244 319 KECAEQVIKSLGVDLKKVDECVGDPEADVDNQVLKTEQDAQIGKGSRGDVTILPTLVINNRQY-RGKLDKGAV 390 (490)
Q Consensus 319 ~~C~~~v~~~l~id~~ki~~C~~d~~~d~~n~iL~~e~~~q~~~~~~~~~~~~Ptl~IN~~~y-rg~l~~~~v 390 (490)
.+=-.++++++|+|..++++|+.++.. ...++++...-.. .+|...||++|||+.+ .|. +.+.+
T Consensus 111 ~~~l~~~a~~~Gld~~~~~~~~~~~~~---~~~v~~~~~~a~~----~gv~gtPt~ving~~~~~g~-~~~~l 175 (193)
T 2rem_A 111 PDELAVFYAGYGVQPDRFVATFNGPEV---EKRFQAARAYALK----VRPVGTPTIVVNGRYMVTGH-DFEDT 175 (193)
T ss_dssp HHHHHHHHHTTTCCHHHHHHHHTSHHH---HHHHHHHHHHHHH----HCCSSSSEEEETTTEEECCS-SHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHhChHH---HHHHHHHHHHHHH----hCCCCCCeEEECCEEEecCC-CHHHH
Confidence 334566788899999999999865421 2234443332112 2378899999999876 565 55443
No 85
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=87.58 E-value=0.26 Score=43.74 Aligned_cols=55 Identities=20% Similarity=0.283 Sum_probs=36.9
Q ss_pred HHHHHHHHHHhCCChhhcccccCCccCcccchHHHHHHHHHhcCCCCCCeEEecEEEEcCee
Q 011244 319 KECAEQVIKSLGVDLKKVDECVGDPEADVDNQVLKTEQDAQIGKGSRGDVTILPTLVINNRQ 380 (490)
Q Consensus 319 ~~C~~~v~~~l~id~~ki~~C~~d~~~d~~n~iL~~e~~~q~~~~~~~~~~~~Ptl~IN~~~ 380 (490)
..=-.++++++|+|.+++++|+.++.. ...++++...-. +.+|..-||++|||+.
T Consensus 106 ~~~l~~~a~~~Gld~~~~~~~~~s~~~---~~~v~~~~~~a~----~~gv~gTPtfiINGky 160 (184)
T 4dvc_A 106 EQELRQIFLDEGIDAAKFDAAYNGFAV---DSMVHRFDKQFQ----DSGLTGVPAVVVNNRY 160 (184)
T ss_dssp HHHHHHHHHTTTCCHHHHHHHHTSHHH---HHHHHHHHHHHH----HHTCCSSSEEEETTTE
T ss_pred HHHHHHHHHHhCCCHHHHHHHHhCHHH---HHHHHHHHHHHH----HcCCCcCCEEEECCEE
Confidence 444567888999999999999965532 223333322211 2347888999999973
No 86
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=87.29 E-value=0.33 Score=36.70 Aligned_cols=31 Identities=26% Similarity=0.484 Sum_probs=23.8
Q ss_pred hhhHhhhccCCCCCCceec-----CCCceeeeeCCCcc
Q 011244 412 VDECEEKLACQCPECKCKD-----TWGSYECSCGSGLL 444 (490)
Q Consensus 412 idEc~~~~~c~c~~~~c~n-----t~g~y~C~C~~~~~ 444 (490)
-|||.. .+|+ .+..|.+ +.++|.|.|+.||.
T Consensus 6 c~~C~~-~pC~-ngG~C~~~~~~~~~~~y~C~C~~Gf~ 41 (63)
T 1hae_A 6 CAEKEK-TFCV-NGGECFMVKDLSNPSRYLCKCQPGFT 41 (63)
T ss_dssp CCHHHH-TTSC-TTCEEEEEESSSSSCCEEEECCTTEE
T ss_pred cCCCCC-CcCC-CCcEEecCCccCCCCCEEEECCCCCc
Confidence 468864 3666 3458986 78999999999985
No 87
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=86.44 E-value=0.36 Score=43.64 Aligned_cols=86 Identities=16% Similarity=0.086 Sum_probs=51.4
Q ss_pred chhhhHHHHhhhCCC-cchhhhHHHHHHHHHHhCCChhhcccccCCccCcccchHHHHHHHHHhcCCCCCCeEEecEEEE
Q 011244 298 LWWDYVTDFAIRCPM-KEKKYTKECAEQVIKSLGVDLKKVDECVGDPEADVDNQVLKTEQDAQIGKGSRGDVTILPTLVI 376 (490)
Q Consensus 298 ~WW~Yv~~f~~~C~~-~~~~y~~~C~~~v~~~l~id~~ki~~C~~d~~~d~~n~iL~~e~~~q~~~~~~~~~~~~Ptl~I 376 (490)
.+|+|.+..-..=.. ..+..+.+=-.++++++|+|.+++.+|+.++.. ...++++...-.. .++...||++|
T Consensus 86 ~~~~~~~~lf~~~~~~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~---~~~v~~~~~~a~~----~gv~gtPt~~v 158 (192)
T 3h93_A 86 VEHDVHNAVFEAIHKEHKKLATPEEMADFLAGKGVDKEKFLSTYNSFAI---KGQMEKAKKLAMA----YQVTGVPTMVV 158 (192)
T ss_dssp CCHHHHHHHHHHHHTSCCCCCSHHHHHHHHHTTTCCHHHHHHHHTCHHH---HHHHHHHHHHHHH----HTCCSSSEEEE
T ss_pred CHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHcCCCHHHHHHHhhCHHH---HHHHHHHHHHHHH----hCCCCCCeEEE
Confidence 366676654321100 111223556677889999999999999965531 2233433332212 23788999999
Q ss_pred cCeeee---eccChhhH
Q 011244 377 NNRQYR---GKLDKGAV 390 (490)
Q Consensus 377 N~~~yr---g~l~~~~v 390 (490)
||+.+. |-.+.+..
T Consensus 159 ng~~~~~~~G~~~~e~l 175 (192)
T 3h93_A 159 NGKYRFDIGSAGGPEET 175 (192)
T ss_dssp TTTEEEEHHHHTSHHHH
T ss_pred CCEEEecccccCCHHHH
Confidence 999876 65555443
No 88
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=85.84 E-value=0.25 Score=42.80 Aligned_cols=32 Identities=28% Similarity=0.726 Sum_probs=24.8
Q ss_pred chhhHhhhccCCCCCCcee-------cCCCceeeeeCCCcc
Q 011244 411 DVDECEEKLACQCPECKCK-------DTWGSYECSCGSGLL 444 (490)
Q Consensus 411 didEc~~~~~c~c~~~~c~-------nt~g~y~C~C~~~~~ 444 (490)
++|+|.. .+|+ ....|+ |+.|+|+|.|+.||.
T Consensus 51 ~~~~C~~-~~C~-~~g~C~~~~~~~~~~~~~~~C~C~~G~~ 89 (143)
T 4d90_A 51 SAGPCTP-NPCH-NGGTCEISEAYRGDTFIGYVCKCPRGFN 89 (143)
T ss_dssp CCCTTSS-CCCC-TTCEEEECCCEETTEECCEEEECCTTEE
T ss_pred cCCcCCC-CCCC-CCCEecCCCccccCCCCCeEeECcCCCc
Confidence 6788864 3565 345798 999999999999974
No 89
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=85.60 E-value=0.73 Score=43.92 Aligned_cols=92 Identities=13% Similarity=0.159 Sum_probs=55.7
Q ss_pred chhhhHHHHhhhCCCcc-hhhh-HHHHHHHHHHhCCChhhcccccCC-ccCcccchHHHHHHHHHhcCCCCCCeEEecEE
Q 011244 298 LWWDYVTDFAIRCPMKE-KKYT-KECAEQVIKSLGVDLKKVDECVGD-PEADVDNQVLKTEQDAQIGKGSRGDVTILPTL 374 (490)
Q Consensus 298 ~WW~Yv~~f~~~C~~~~-~~y~-~~C~~~v~~~l~id~~ki~~C~~d-~~~d~~n~iL~~e~~~q~~~~~~~~~~~~Ptl 374 (490)
..|.|+...-..-.... +.-+ .+=-..+++++|+|.+++.+++.+ +. ... .++++...-.. .++...|++
T Consensus 115 ~~~~~~~alf~a~~~~g~~i~d~~~~L~~~a~~~Gld~~~~~~~l~s~~~--~~~-~v~~~~~~a~~----~Gv~GvPtf 187 (239)
T 3gl5_A 115 RHEALLDAFYRGNFADERSVFNDDERLVELAVGAGLDAEEVRAVLADPAA--YAD-EVRADEREAAQ----LGATGVPFF 187 (239)
T ss_dssp CHHHHHHHHHHHHHTCSSCCSSCHHHHHHHHHHTTCCHHHHHHHHHCTTT--THH-HHHHHHHHHHH----TTCCSSSEE
T ss_pred cHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHcCCCHHHHHHHHcCcHh--HHH-HHHHHHHHHHH----CCCCeeCeE
Confidence 35666665433211111 1222 344567888999999999999976 42 123 33333332222 348899999
Q ss_pred EEcCe-eeeeccChhhHHHHhhc
Q 011244 375 VINNR-QYRGKLDKGAVLKAICA 396 (490)
Q Consensus 375 ~IN~~-~yrg~l~~~~vl~~iC~ 396 (490)
+|||+ .+.|..+.+....+|=.
T Consensus 188 vv~g~~~v~Ga~~~e~~~~~i~~ 210 (239)
T 3gl5_A 188 VLDRAYGVSGAQPAEVFTQALTQ 210 (239)
T ss_dssp EETTTEEEESSCCHHHHHHHHHH
T ss_pred EECCcEeecCCCCHHHHHHHHHH
Confidence 99997 67888777665555544
No 90
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=85.14 E-value=0.4 Score=33.73 Aligned_cols=24 Identities=25% Similarity=0.522 Sum_probs=19.1
Q ss_pred cCCCCCCcee--cCCCceeeeeCCCcc
Q 011244 420 ACQCPECKCK--DTWGSYECSCGSGLL 444 (490)
Q Consensus 420 ~c~c~~~~c~--nt~g~y~C~C~~~~~ 444 (490)
+|+ .+..|. ++.++|.|.|+.||.
T Consensus 10 pC~-ngg~C~~~~~~~~~~C~C~~G~~ 35 (45)
T 1a3p_A 10 YCL-NGGVXMHIESLDSYTCNCVIGYS 35 (45)
T ss_dssp CCS-SSCEEEECTTTSSEEEECCTTEE
T ss_pred CCC-CCCEEEeecCCCCEEEEcCCCCc
Confidence 444 345787 899999999999985
No 91
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=84.79 E-value=0.52 Score=42.55 Aligned_cols=62 Identities=18% Similarity=0.091 Sum_probs=40.5
Q ss_pred HHHHHHHHh-CCChhhcccccCCccCcccchHHHHHHHHHhcCCCCCCeEEecEEEEcCee-eeeccChhh
Q 011244 321 CAEQVIKSL-GVDLKKVDECVGDPEADVDNQVLKTEQDAQIGKGSRGDVTILPTLVINNRQ-YRGKLDKGA 389 (490)
Q Consensus 321 C~~~v~~~l-~id~~ki~~C~~d~~~d~~n~iL~~e~~~q~~~~~~~~~~~~Ptl~IN~~~-yrg~l~~~~ 389 (490)
=-.++++++ |+|..++.+|+.++. ....++++...-.. .++...||++|||+. ..|..+.+.
T Consensus 107 ~l~~~a~~~~Gld~~~~~~~~~~~~---~~~~v~~~~~~a~~----~gv~gtPt~ving~~~~~g~~~~~~ 170 (195)
T 2znm_A 107 VAGKWALSQKGFDGKKLMRAYDSPE---AAAAALKMQKLTEQ----YRIDSTPTVIVGGKYRVIFNNGFDG 170 (195)
T ss_dssp HHHHHHHTCSSSCHHHHHHHHTSHH---HHHHHHHHHHHHHH----TTCCSSSEEEETTTEEECCCSHHHH
T ss_pred HHHHHHHHcCCCCHHHHHHHhcCHH---HHHHHHHHHHHHHH----cCCCCCCeEEECCEEEEcCCCCHHH
Confidence 345677888 999999999986542 12344443332212 347889999999985 667644433
No 92
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=83.55 E-value=0.9 Score=41.08 Aligned_cols=59 Identities=15% Similarity=0.194 Sum_probs=40.8
Q ss_pred HHHHHHHHHHhCCChhhcccccCCccCcccchHHHHHHHHHhcCCCCCCeEEecEEEEcCeeeeec
Q 011244 319 KECAEQVIKSLGVDLKKVDECVGDPEADVDNQVLKTEQDAQIGKGSRGDVTILPTLVINNRQYRGK 384 (490)
Q Consensus 319 ~~C~~~v~~~l~id~~ki~~C~~d~~~d~~n~iL~~e~~~q~~~~~~~~~~~~Ptl~IN~~~yrg~ 384 (490)
.+=-.++++++|+|.+++++|+.++.. ...++++...-.. .++...||++|||+.+.+-
T Consensus 107 ~~~l~~~a~~~Gld~~~~~~~~~s~~~---~~~v~~~~~~a~~----~gv~gtPt~ving~~~~~g 165 (195)
T 3hd5_A 107 KKAMGEWAASQGVDRAKFDSVFDSFSV---QTQVQRASQLAEA----AHIDGTPAFAVGGRYMTSP 165 (195)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHTCHHH---HHHHHHHHHHHHH----TTCCSSSEEEETTTEEECT
T ss_pred HHHHHHHHHHhCCCHHHHHHHHcCHHH---HHHHHHHHHHHHH----hCCCcCceEEECCEEEeCc
Confidence 445667888999999999999965432 2234433332212 3478899999999988763
No 93
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1
Probab=83.04 E-value=0.4 Score=46.79 Aligned_cols=28 Identities=36% Similarity=0.824 Sum_probs=25.5
Q ss_pred ceecCCCceeeeeCCCccceecCCeeee
Q 011244 427 KCKDTWGSYECSCGSGLLYMQEHDTCIS 454 (490)
Q Consensus 427 ~c~nt~g~y~C~C~~~~~~~~~~~tC~~ 454 (490)
.|.|+.|+|.|.|..||.+..++.+|..
T Consensus 136 ~C~n~~g~~~csC~~Gy~L~~d~~~C~~ 163 (286)
T 1nt0_A 136 YCHXYLGGYYCSCRVGYILHQNKHTCSA 163 (286)
T ss_dssp EEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred ccccccCceEeecCCCceeccCCCCccc
Confidence 6999999999999999999988888864
No 94
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=80.53 E-value=1.6 Score=39.60 Aligned_cols=56 Identities=16% Similarity=0.228 Sum_probs=38.2
Q ss_pred HHHHHHHHHHh-CCChhhcccccCCccCcccchHHHHHHHHHhcCCCCCCeEEecEEEEcCeee
Q 011244 319 KECAEQVIKSL-GVDLKKVDECVGDPEADVDNQVLKTEQDAQIGKGSRGDVTILPTLVINNRQY 381 (490)
Q Consensus 319 ~~C~~~v~~~l-~id~~ki~~C~~d~~~d~~n~iL~~e~~~q~~~~~~~~~~~~Ptl~IN~~~y 381 (490)
.+=-.+++.++ |+|.+++++|+.++.. ...++++...-.. .++...||++|||+..
T Consensus 100 ~~~l~~~a~~~~Gld~~~~~~~~~s~~~---~~~v~~~~~~a~~----~gv~GtPt~~vng~~~ 156 (189)
T 3l9v_A 100 PDDVRRVFMSATGISRGEYDRSIKSPAV---NDMVALQERLFKE----YGVRGTPSVYVRGRYH 156 (189)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHTTSHHH---HHHHHHHHHHHHH----TTCCSSSEEEETTTEE
T ss_pred HHHHHHHHHHccCCCHHHHHHHHhhHHH---HHHHHHHHHHHHH----hCCCccCEEEECCEEE
Confidence 45567788888 9999999999975532 2234443332212 3478899999999854
No 95
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}
Probab=79.32 E-value=0.7 Score=44.62 Aligned_cols=29 Identities=31% Similarity=0.753 Sum_probs=26.1
Q ss_pred ceecCCCceeeeeCCCccceecCCeeeec
Q 011244 427 KCKDTWGSYECSCGSGLLYMQEHDTCISK 455 (490)
Q Consensus 427 ~c~nt~g~y~C~C~~~~~~~~~~~tC~~~ 455 (490)
.|.|+.|+|.|.|..||.+..++.+|...
T Consensus 137 ~C~n~~g~~~C~C~~Gy~l~~d~~~C~~~ 165 (278)
T 3dem_A 137 YCHNYIGGYYCSCRFGYILHTDNRTCRVE 165 (278)
T ss_dssp EEEEETTEEEEECCTTCEECTTSSCEECC
T ss_pred CcCCccCCcEEEeCCcceeccCCCCCccc
Confidence 59999999999999999999898888753
No 96
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=78.91 E-value=1 Score=41.30 Aligned_cols=57 Identities=12% Similarity=0.146 Sum_probs=39.0
Q ss_pred HHHHHHHHHHhCCChhhcccccCCccCcccchHHHHHHHHHhcCCCCCCeEEecEEEEcCeeee
Q 011244 319 KECAEQVIKSLGVDLKKVDECVGDPEADVDNQVLKTEQDAQIGKGSRGDVTILPTLVINNRQYR 382 (490)
Q Consensus 319 ~~C~~~v~~~l~id~~ki~~C~~d~~~d~~n~iL~~e~~~q~~~~~~~~~~~~Ptl~IN~~~yr 382 (490)
.+=-.++++++|+|.+++++|+.++.. ...++++...-.. .+|...||++|||+..-
T Consensus 107 ~~~L~~~a~~~Gld~~~~~~~~~s~~~---~~~v~~~~~~a~~----~gv~gtPtfvvnG~~~v 163 (191)
T 3l9s_A 107 AADIRKVFVDAGVKGEDYDAAWNSFVV---KSLVAQQEKAAAD----LQLQGVPAMFVNGKYQI 163 (191)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHTSHHH---HHHHHHHHHHHHH----TTCCSSSEEEETTTEEE
T ss_pred HHHHHHHHHHcCCCHHHHHHHHhCHHH---HHHHHHHHHHHHH----hCCcccCEEEECCEEEE
Confidence 444677888999999999999965532 2344443332212 34788999999998654
No 97
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=78.17 E-value=1.6 Score=39.92 Aligned_cols=90 Identities=10% Similarity=0.101 Sum_probs=51.3
Q ss_pred chhhhHHHHhhhCCCcchhh-hHHHHHHHHHHhCCChhhcccccCCccCcccchHHHHHHHHHhcCCCCCCeEEecEEEE
Q 011244 298 LWWDYVTDFAIRCPMKEKKY-TKECAEQVIKSLGVDLKKVDECVGDPEADVDNQVLKTEQDAQIGKGSRGDVTILPTLVI 376 (490)
Q Consensus 298 ~WW~Yv~~f~~~C~~~~~~y-~~~C~~~v~~~l~id~~ki~~C~~d~~~d~~n~iL~~e~~~q~~~~~~~~~~~~Ptl~I 376 (490)
+.|+|.+..-..-....... +.+=-.++++++|+|.+++.+|+.++.. .. .++++...-.. .++...||++|
T Consensus 110 ~~~~~~~~lf~a~~~~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~--~~-~v~~~~~~a~~----~gv~g~Pt~~i 182 (216)
T 2in3_A 110 KVFPFFAAIQRAFYVGQEDVAQLAILKKLAVDLGIPESRFTPVFQSDEA--KQ-RTLAGFQRVAQ----WGISGFPALVV 182 (216)
T ss_dssp GHHHHHHHHHHHHHTTCCCTTSHHHHHHHHHHTTCCHHHHHHHHHSHHH--HH-HHHHHHHHHHH----TTCCSSSEEEE
T ss_pred hHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHcCCCHHHHHHHhcchHH--HH-HHHHHHHHHHH----cCCcccceEEE
Confidence 46777765433111111111 1333467788899999999999865421 12 23333222112 34788999988
Q ss_pred --cCee---eeeccChhhHHHHh
Q 011244 377 --NNRQ---YRGKLDKGAVLKAI 394 (490)
Q Consensus 377 --N~~~---yrg~l~~~~vl~~i 394 (490)
||+. +.|..+.+.+...|
T Consensus 183 ~~~G~~~~~~~G~~~~~~l~~~l 205 (216)
T 2in3_A 183 ESGTDRYLITTGYRPIEALRQLL 205 (216)
T ss_dssp EETTEEEEEESSCCCHHHHHHHH
T ss_pred EECCEEEEeccCCCCHHHHHHHH
Confidence 9985 67766655544443
No 98
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=77.56 E-value=0.46 Score=42.00 Aligned_cols=25 Identities=36% Similarity=0.897 Sum_probs=19.9
Q ss_pred cCCCCCCceecCCCceeeeeCCCccc
Q 011244 420 ACQCPECKCKDTWGSYECSCGSGLLY 445 (490)
Q Consensus 420 ~c~c~~~~c~nt~g~y~C~C~~~~~~ 445 (490)
+|+ ....|+|+.++|.|.|++||..
T Consensus 126 ~C~-~~g~C~~~~~~~~c~C~~g~~G 150 (162)
T 1g1s_A 126 SCS-KQGECLETIGNYTCSCYPGFYG 150 (162)
T ss_dssp GGG-GSEEEEECSSSEEEEECTTEES
T ss_pred CCC-CCCEEecCCCCceEeCCCCCcC
Confidence 444 2347999999999999999873
No 99
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=76.55 E-value=1.1 Score=48.49 Aligned_cols=37 Identities=27% Similarity=0.675 Sum_probs=28.4
Q ss_pred hhhHhhhccCCCCCCceec-CCCceeeeeC-CCccceecCCeeee
Q 011244 412 VDECEEKLACQCPECKCKD-TWGSYECSCG-SGLLYMQEHDTCIS 454 (490)
Q Consensus 412 idEc~~~~~c~c~~~~c~n-t~g~y~C~C~-~~~~~~~~~~tC~~ 454 (490)
+|||.. .+|+ .+..|.+ .+++|.|.|+ .||. +..|..
T Consensus 2 ~d~C~~-~PC~-ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce~ 40 (553)
T 1q4g_A 2 VNPCCY-YPCQ-HQGICVRFGLDRYQCDCTRTGYS----GPNCTI 40 (553)
T ss_dssp CCGGGG-CCCC-TTCEEEEETTTEEEEECTTSSEE----TTTTCE
T ss_pred CCcCCC-CCCC-CCCCcCCCCCCceEeeCCCCCcC----CCCCCC
Confidence 688986 4777 4458999 9999999999 7775 356743
No 100
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=75.44 E-value=0.66 Score=37.59 Aligned_cols=28 Identities=14% Similarity=0.093 Sum_probs=22.2
Q ss_pred chhhHhhhccCCCCCCceecCCCceeeeeCCCccce
Q 011244 411 DVDECEEKLACQCPECKCKDTWGSYECSCGSGLLYM 446 (490)
Q Consensus 411 didEc~~~~~c~c~~~~c~nt~g~y~C~C~~~~~~~ 446 (490)
|+|||... .|.|+.++|.|.|+.||...
T Consensus 16 ~~~~c~~~--------pC~n~~~~y~C~C~~G~~~C 43 (91)
T 1tpg_A 16 QQHQSWLR--------PVLRSNRVEYCWCNSGRAQC 43 (91)
T ss_dssp CSSCEEEE--------ECSSSSCEEEEECSSSCCBC
T ss_pred CCCcccCC--------ccccCCCCcEeECCCCCccc
Confidence 67888532 37899999999999999644
No 101
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=74.86 E-value=1.3 Score=48.25 Aligned_cols=40 Identities=23% Similarity=0.582 Sum_probs=31.4
Q ss_pred hhhHhhh-ccCCCCCCceecCC--CceeeeeCCCccceecCCeeee
Q 011244 412 VDECEEK-LACQCPECKCKDTW--GSYECSCGSGLLYMQEHDTCIS 454 (490)
Q Consensus 412 idEc~~~-~~c~c~~~~c~nt~--g~y~C~C~~~~~~~~~~~tC~~ 454 (490)
.|+|... ..|+ -.|.++. ++|.|.|+.||.+..|+.||..
T Consensus 272 ~n~C~~~ng~Cs---~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~ 314 (619)
T 3s94_A 272 TNPCGIDNGGCS---HLCLMSPVKPFYQCACPTGVKLLENGKTCKD 314 (619)
T ss_dssp CCTTTTTGGGCS---SEEEECSSTTSEEEECCTTCCBCTTSSCBCS
T ss_pred cccccCCCCccc---ceEECCCCCCCceEeCCchheecccCcccCC
Confidence 3567653 4454 3799887 4799999999999999999986
No 102
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=74.20 E-value=1.8 Score=43.07 Aligned_cols=29 Identities=21% Similarity=0.545 Sum_probs=26.1
Q ss_pred ceecCCCceeeeeCCCccceecCCeeeecC
Q 011244 427 KCKDTWGSYECSCGSGLLYMQEHDTCISKD 456 (490)
Q Consensus 427 ~c~nt~g~y~C~C~~~~~~~~~~~tC~~~~ 456 (490)
.|.-+.++|.|.|+++|. ..|+.||+...
T Consensus 317 lCl~~~~~~~C~C~~g~~-~~d~~~C~~~~ 345 (349)
T 3v64_C 317 LCLPSGQNYTCACPTGFR-KINSHACALEV 345 (349)
T ss_dssp EEECCTTSCEEECCTTEE-EETTTEEEEGG
T ss_pred EeecCCCCCeeECCCCCc-CCCCCcccchh
Confidence 698888999999999999 99999998753
No 103
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=73.90 E-value=1.3 Score=39.68 Aligned_cols=59 Identities=12% Similarity=0.252 Sum_probs=36.1
Q ss_pred HHHhCCChhhcccccCCccCcccchHHHHHHHHHhcCCCCCCeEEecEEEEcCeee-e--eccChhhHH
Q 011244 326 IKSLGVDLKKVDECVGDPEADVDNQVLKTEQDAQIGKGSRGDVTILPTLVINNRQY-R--GKLDKGAVL 391 (490)
Q Consensus 326 ~~~l~id~~ki~~C~~d~~~d~~n~iL~~e~~~q~~~~~~~~~~~~Ptl~IN~~~y-r--g~l~~~~vl 391 (490)
++++|+|.+++++|+.++.. ...++++...- .+.++...||++|||+.. . |-.+.+...
T Consensus 125 a~~~Gld~~~~~~~~~~~~~---~~~v~~~~~~a----~~~gv~gtPt~~ing~~~~~~~g~~~~~~l~ 186 (195)
T 3c7m_A 125 LDAAGMSQADFEAALKEPAV---QETLEKWKASY----DVAKIQGVPAYVVNGKYLIYTKSIKSIDAMA 186 (195)
T ss_dssp HHHHTCCHHHHHHHHTSHHH---HHHHHHGGGHH----HHHHHHCSSEEEETTTEEECGGGCCCHHHHH
T ss_pred HHHcCCCHHHHHHHHcChHH---HHHHHHHHHHH----HHcCCCccCEEEECCEEEeccCCCCCHHHHH
Confidence 88999999999999865421 12233322111 113477889999999864 2 443444433
No 104
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=72.81 E-value=2.1 Score=38.79 Aligned_cols=66 Identities=17% Similarity=0.228 Sum_probs=41.8
Q ss_pred HHHHHHHHHHhCC-ChhhcccccCCccCcccchHHHHHHHHHhcCCCCCCeEEecEEEEcCeee---eeccChhhHHH
Q 011244 319 KECAEQVIKSLGV-DLKKVDECVGDPEADVDNQVLKTEQDAQIGKGSRGDVTILPTLVINNRQY---RGKLDKGAVLK 392 (490)
Q Consensus 319 ~~C~~~v~~~l~i-d~~ki~~C~~d~~~d~~n~iL~~e~~~q~~~~~~~~~~~~Ptl~IN~~~y---rg~l~~~~vl~ 392 (490)
.+=-.+++.++|+ |.+++++++.+ . ..+ .++++...-.. .+|...|+++|||+.. .|-.+.+....
T Consensus 108 ~~~L~~~a~~~Gl~d~~~~~~~~~~-~--~~~-~v~~~~~~a~~----~gv~GtPtfvvng~~~v~~~Ga~~~e~~~~ 177 (185)
T 3feu_A 108 QEAYSKAFTSRGLVSPYDFNEEQRD-T--LIK-KVDNAKMLSEK----SGISSVPTFVVNGKYNVLIGGHDDPKQIAD 177 (185)
T ss_dssp HHHHHHHHHTTTCCCGGGCCHHHHH-H--HHH-HHHHHHHHHHH----HTCCSSSEEEETTTEEECGGGCSSHHHHHH
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHH-H--HHH-HHHHHHHHHHH----cCCCccCEEEECCEEEEecCCCCCHHHHHH
Confidence 4456678888998 99999999753 2 122 33333322112 3478899999999853 56656554433
No 105
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=70.54 E-value=3 Score=38.42 Aligned_cols=55 Identities=11% Similarity=0.163 Sum_probs=36.8
Q ss_pred HHHHHHHhCCChhhcccccCCccCcccchHHHHHHHHHhcCCCCCCeEEecEEEEcCeeeee
Q 011244 322 AEQVIKSLGVDLKKVDECVGDPEADVDNQVLKTEQDAQIGKGSRGDVTILPTLVINNRQYRG 383 (490)
Q Consensus 322 ~~~v~~~l~id~~ki~~C~~d~~~d~~n~iL~~e~~~q~~~~~~~~~~~~Ptl~IN~~~yrg 383 (490)
-.+++.++|+|.+++++|+.++. ....++++...--. .++...|+++|||+.+..
T Consensus 9 L~~~a~~~Gld~~~~~~~l~s~~---~~~~v~~~~~~a~~----~gi~gvP~fvingk~~~~ 63 (197)
T 1un2_A 9 IRDVFINAGIKGEEYDAAWNSFV---VKSLVAQQEKAAAD----VQLRGVPAMFVNGKYQLN 63 (197)
T ss_dssp HHHHHHHHTCCHHHHHHHHTSHH---HHHHHHHHHHHHHH----TTCCSSSEEEETTTEEEC
T ss_pred HHHHHHHcCCCHHHHHHHHhCHH---HHHHHHHHHHHHHH----cCCCcCCEEEEcceEecC
Confidence 35678889999999999986543 22344443332112 236679999999987654
No 106
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=70.33 E-value=5.3 Score=37.06 Aligned_cols=95 Identities=9% Similarity=0.009 Sum_probs=55.4
Q ss_pred chhhhHHHHhhhCCCcc-hhhhHHHHHHHHHHhCCC---hhhcccccCCccCcccchHHHHHHHHHhcCCCCCCeEEecE
Q 011244 298 LWWDYVTDFAIRCPMKE-KKYTKECAEQVIKSLGVD---LKKVDECVGDPEADVDNQVLKTEQDAQIGKGSRGDVTILPT 373 (490)
Q Consensus 298 ~WW~Yv~~f~~~C~~~~-~~y~~~C~~~v~~~l~id---~~ki~~C~~d~~~d~~n~iL~~e~~~q~~~~~~~~~~~~Pt 373 (490)
.+|+|.+..-..-.... +.-+.+=-.+++.++|+| .+++.+|+.++. ....++++...-.. .++...|+
T Consensus 113 ~~~~~~~alf~a~~~~~~~i~~~~~L~~~a~~~Gl~~~d~~~~~~~~~s~~---~~~~v~~~~~~a~~----~gv~G~Pt 185 (226)
T 1r4w_A 113 MLEKVSRELWMRIWSRDEDITESQNILSAAEKAGMATAQAQHLLNKISTEL---VKSKLRETTGAACK----YGAFGLPT 185 (226)
T ss_dssp GHHHHHHHHHHHHHTSCCCCSSHHHHHHHHHHTTCCHHHHHHHHTTTTSHH---HHHHHHHHHHHHHH----TTCCSSCE
T ss_pred HHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHcCCCchhHHHHHHHcCCHH---HHHHHHHHHHHHHH----CCCCCCCE
Confidence 35777765432110011 111234456788899995 557778875442 12233333322112 34788999
Q ss_pred EEEc----CeeeeeccChhhHHHHhhcCCC
Q 011244 374 LVIN----NRQYRGKLDKGAVLKAICAGFQ 399 (490)
Q Consensus 374 l~IN----~~~yrg~l~~~~vl~~iC~gf~ 399 (490)
++|| +..+.|....+.+..+|=....
T Consensus 186 fvv~~~g~~~~~~G~~~~~~l~~~l~~~~~ 215 (226)
T 1r4w_A 186 TVAHVDGKTYMLFGSDRMELLAYLLGEKWM 215 (226)
T ss_dssp EEEEETTEEEEEESTTCHHHHHHHHTCCCC
T ss_pred EEEeCCCCcCceeCCCcHHHHHHHhcCccc
Confidence 9999 8899998777667777755443
No 107
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=67.81 E-value=3 Score=38.16 Aligned_cols=73 Identities=11% Similarity=0.145 Sum_probs=42.8
Q ss_pred hhhhHHHHhhhCCCc-chhhhHHHHHHHHHHhCCChhhcccccCCccCcccchHHHHHHHHHhcCCCCCCeEEecEEEEc
Q 011244 299 WWDYVTDFAIRCPMK-EKKYTKECAEQVIKSLGVDLKKVDECVGDPEADVDNQVLKTEQDAQIGKGSRGDVTILPTLVIN 377 (490)
Q Consensus 299 WW~Yv~~f~~~C~~~-~~~y~~~C~~~v~~~l~id~~ki~~C~~d~~~d~~n~iL~~e~~~q~~~~~~~~~~~~Ptl~IN 377 (490)
.|+|....-..-... .+..+.+=-.++++++|+|.+++++|+.++. ....++++...-.. .++...|+++||
T Consensus 104 ~~~~~~~l~~a~~~~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~s~~---~~~~v~~~~~~a~~----~gv~g~Pt~~v~ 176 (208)
T 3kzq_A 104 YEQMLEAIQHAYYLRAMPPHEEATHLQLAKEIGLNVQQFKNDMDGTL---LEGVFQDQLSLAKS----LGVNSYPSLVLQ 176 (208)
T ss_dssp HHHHHHHHHHHHHTSCCCTTCHHHHHHHHHHTTCCHHHHHHHHTSHH---HHHHHHHHHHHHHH----TTCCSSSEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHcCCCHHHHHHHHhChH---HHHHHHHHHHHHHH----cCCCcccEEEEE
Confidence 366766654321111 1122345567788999999999999996542 12233333332112 347889999997
Q ss_pred C
Q 011244 378 N 378 (490)
Q Consensus 378 ~ 378 (490)
+
T Consensus 177 ~ 177 (208)
T 3kzq_A 177 I 177 (208)
T ss_dssp E
T ss_pred E
Confidence 4
No 108
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=63.37 E-value=2.4 Score=46.09 Aligned_cols=37 Identities=24% Similarity=0.809 Sum_probs=26.8
Q ss_pred hhhHhhhccCCCCCCceec-CCCceeeeeC-CCccceecCCeeee
Q 011244 412 VDECEEKLACQCPECKCKD-TWGSYECSCG-SGLLYMQEHDTCIS 454 (490)
Q Consensus 412 idEc~~~~~c~c~~~~c~n-t~g~y~C~C~-~~~~~~~~~~tC~~ 454 (490)
||||.. .+|+ .+..|.+ .+++|.|.|+ .||. +..|..
T Consensus 1 vd~C~s-~PC~-ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce~ 39 (587)
T 3nt1_A 1 ANPCCS-NPCQ-NRGECMSTGFDQYKCDCTRTGFY----GENCTT 39 (587)
T ss_dssp CCTTTT-CCCC-TTCEEEEEETTEEEEECTTSSEE----TTTTCE
T ss_pred CCCCCC-CCCC-CCCEeeCCCCCCeEEecCCCCcc----CCCCCC
Confidence 578875 4777 3458995 6799999999 7874 455643
No 109
>1dme_A CD6 metallothionein-1; NMR {Callinectes sapidus} SCOP: g.46.1.1 PDB: 1dmf_A 1j5m_A
Probab=62.03 E-value=3.3 Score=26.23 Aligned_cols=24 Identities=42% Similarity=1.034 Sum_probs=15.0
Q ss_pred CCCccCCcchhhHhh---hccCCCCCCce
Q 011244 403 EPAICLSEDVDECEE---KLACQCPECKC 428 (490)
Q Consensus 403 ~p~~C~~~didEc~~---~~~c~c~~~~c 428 (490)
|.|-|. |-=||+| |..|.|.+|.|
T Consensus 1 PdPCC~--dkceC~eG~CK~GC~ctscrC 27 (28)
T 1dme_A 1 PGPCCN--DKCVCQEGGCKAGCQCTSCRC 27 (28)
T ss_dssp CCCSTT--SCCCTTTTCCCSCCCCTTSCC
T ss_pred CCCccC--CeeeecCCCcccCceeccccc
Confidence 345676 6777877 35666666554
No 110
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=59.37 E-value=2.9 Score=30.49 Aligned_cols=21 Identities=24% Similarity=0.710 Sum_probs=17.3
Q ss_pred CCcee--cCCCceeeeeCCCccc
Q 011244 425 ECKCK--DTWGSYECSCGSGLLY 445 (490)
Q Consensus 425 ~~~c~--nt~g~y~C~C~~~~~~ 445 (490)
+..|. +..++|.|.|+.||.-
T Consensus 17 GG~C~~~~~~~~~~C~C~~GytG 39 (53)
T 1nql_B 17 DGVCMYIEALDKYACNCVVGYIG 39 (53)
T ss_dssp TCEEEEETTTTEEEEEECTTEES
T ss_pred CeEEeeecCCCCEEEecCCCCcC
Confidence 35788 7889999999999853
No 111
>3rpp_A Glutathione S-transferase kappa 1; glutathione transferase, kappa GST, TRX domain, GSH binding, detoxification, APO form; 1.80A {Homo sapiens} PDB: 3rpn_A 1yzx_A*
Probab=55.84 E-value=11 Score=35.49 Aligned_cols=77 Identities=10% Similarity=0.057 Sum_probs=45.4
Q ss_pred HHHHHHHHHHhCCChhhcccccCCccCcccchHHHHHHHHHhcCCCCCCeEEecEEEEc--C--eeeeeccChhhHHHHh
Q 011244 319 KECAEQVIKSLGVDLKKVDECVGDPEADVDNQVLKTEQDAQIGKGSRGDVTILPTLVIN--N--RQYRGKLDKGAVLKAI 394 (490)
Q Consensus 319 ~~C~~~v~~~l~id~~ki~~C~~d~~~d~~n~iL~~e~~~q~~~~~~~~~~~~Ptl~IN--~--~~yrg~l~~~~vl~~i 394 (490)
.+=-..++.++|+|.+++++-......+.....|+++...-... ++...|+++|| | ..|.|.-.-+.+..++
T Consensus 135 ~~~L~~~a~~~GLd~~~~~~~l~~~~s~~~~~~l~~~~~~a~~~----Gv~GvPtfvv~~~g~~~~f~G~drl~~l~~~L 210 (234)
T 3rpp_A 135 PQSILAAAEKAGMSAEQAQGLLEKIATPKVKNQLKETTEAACRY----GAFGLPITVAHVDGQTHMLFGSDRMELLAHLL 210 (234)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHTTTTSHHHHHHHHHHHHHHHHT----TCSSSCEEEEEETTEEEEEESSSCHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHccCHHHHHHHHHHHHHHHHc----CCCCCCEEEEeCCCCcCceeCccCHHHHHHHh
Confidence 45667788899999965554442211111223333333322222 37899999996 6 6788986666666666
Q ss_pred hcCCC
Q 011244 395 CAGFQ 399 (490)
Q Consensus 395 C~gf~ 399 (490)
=..+.
T Consensus 211 ~~~~~ 215 (234)
T 3rpp_A 211 GEKWM 215 (234)
T ss_dssp TCCCC
T ss_pred ccccC
Confidence 33443
No 112
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=54.40 E-value=2.2 Score=37.10 Aligned_cols=19 Identities=32% Similarity=0.903 Sum_probs=17.1
Q ss_pred CceecCCCceeeeeCCCcc
Q 011244 426 CKCKDTWGSYECSCGSGLL 444 (490)
Q Consensus 426 ~~c~nt~g~y~C~C~~~~~ 444 (490)
..|.++|++|.|.|..+|.
T Consensus 131 g~C~~~~~~~~c~C~~g~~ 149 (157)
T 1g1t_A 131 GECVETINNYTCKCDPGFS 149 (157)
T ss_dssp EEEEEETTEEEEEECTTEE
T ss_pred CEeecCCCCeeEECCCCcc
Confidence 4799999999999998875
No 113
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=53.97 E-value=11 Score=32.83 Aligned_cols=27 Identities=11% Similarity=0.329 Sum_probs=21.5
Q ss_pred CeEEecEEEEcCeeeeeccChhhHHHH
Q 011244 367 DVTILPTLVINNRQYRGKLDKGAVLKA 393 (490)
Q Consensus 367 ~~~~~Ptl~IN~~~yrg~l~~~~vl~~ 393 (490)
++...||++|||+.+.|..+.+.+...
T Consensus 146 gv~gtPt~vvng~~~~G~~~~~~l~~~ 172 (175)
T 1z6m_A 146 HIQFVPTIIIGEYIFDESVTEEELRGY 172 (175)
T ss_dssp TCCSSCEEEETTEEECTTCCHHHHHHH
T ss_pred CCCCcCeEEECCEEccCCCCHHHHHHH
Confidence 478889999999999998776655544
No 114
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=52.45 E-value=7.3 Score=31.85 Aligned_cols=28 Identities=36% Similarity=0.466 Sum_probs=24.1
Q ss_pred CeEEecEEEEcCeeeeeccChhhHHHHh
Q 011244 367 DVTILPTLVINNRQYRGKLDKGAVLKAI 394 (490)
Q Consensus 367 ~~~~~Ptl~IN~~~yrg~l~~~~vl~~i 394 (490)
+|..+||++|||..|.|..+.+.+.+.+
T Consensus 63 ~V~~~PT~~i~G~~~~G~~~~~~l~~~~ 90 (106)
T 3kp8_A 63 GITSYPTWIINGRTYTGVRSLEALAVAS 90 (106)
T ss_dssp TCCSSSEEEETTEEEESCCCHHHHHHHH
T ss_pred CCeEeCEEEECCEEecCCCCHHHHHHHh
Confidence 3788999999999999999988877765
No 115
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=50.88 E-value=5.5 Score=40.57 Aligned_cols=29 Identities=24% Similarity=0.884 Sum_probs=21.3
Q ss_pred hhHhhhccCCCCCCceecCCCceeeeeCC-Cc
Q 011244 413 DECEEKLACQCPECKCKDTWGSYECSCGS-GL 443 (490)
Q Consensus 413 dEc~~~~~c~c~~~~c~nt~g~y~C~C~~-~~ 443 (490)
++|.+ .+|+- ...|.+.|++|.|.|+. +|
T Consensus 186 ~~C~~-~pC~n-~g~C~~~~~~~~C~C~~~~~ 215 (410)
T 3asi_A 186 TTCQE-DSCSN-QGVCLQQWDGFSCDCSMTSF 215 (410)
T ss_dssp SCCCT-TSSST-TCEEEECSSSEEEECTTTSE
T ss_pred CCccc-ccCCC-CCEecCCCCCceEeccCCcc
Confidence 34543 36773 45899999999999986 55
No 116
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=48.73 E-value=16 Score=32.96 Aligned_cols=53 Identities=19% Similarity=0.297 Sum_probs=32.7
Q ss_pred HHHHHHHHhCCChhhcccccCCccCcccchHHHHHHHHHhcCCCCCCeEEecEEEEcCeeeee
Q 011244 321 CAEQVIKSLGVDLKKVDECVGDPEADVDNQVLKTEQDAQIGKGSRGDVTILPTLVINNRQYRG 383 (490)
Q Consensus 321 C~~~v~~~l~id~~ki~~C~~d~~~d~~n~iL~~e~~~q~~~~~~~~~~~~Ptl~IN~~~yrg 383 (490)
=-..+.+.+|+|.+++ +.++. ...-++++.+.-.. .+|..-||++|||+.+.|
T Consensus 115 ~l~~~a~~~Gld~~~~---l~~~~---~~~~v~~~~~~a~~----~GV~gtPtf~ing~~~~~ 167 (182)
T 3gn3_A 115 IIARIERYSGLALAEA---FANPE---LEHAVKWHTKYARQ----NGIHVSPTFMINGLVQPG 167 (182)
T ss_dssp HHHHHHHHHTCCCHHH---HHCGG---GHHHHHHHHHHHHH----HTCCSSSEEEETTEECTT
T ss_pred HHHHHHHHhCCCHHHH---hcChH---HHHHHHHHHHHHHH----CCCCccCEEEECCEEccC
Confidence 3456778899998887 44332 22233332222112 347888999999999853
No 117
>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens}
Probab=48.28 E-value=8.4 Score=38.36 Aligned_cols=43 Identities=37% Similarity=0.814 Sum_probs=31.2
Q ss_pred chhhHhhh--ccCCCCCCceecCCCceeeeeCCCccceecCCeeee
Q 011244 411 DVDECEEK--LACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCIS 454 (490)
Q Consensus 411 didEc~~~--~~c~c~~~~c~nt~g~y~C~C~~~~~~~~~~~tC~~ 454 (490)
+.+||.+. ....|. ..|.|+-|+|.|.|..++.+..+..+|..
T Consensus 120 ~~~~c~~~~~~~~~~~-~~c~n~~g~~~csC~~g~~l~~~~~~~~~ 164 (361)
T 4aqb_A 120 DVDECKEREDEELSCD-HYCHNYIGGYYCSCRFGYILHTDNRTCRV 164 (361)
T ss_dssp ECCGGGTGGGSSSCCS-SEEEEETTEEEEECCTTCEECTTSSCEEC
T ss_pred cccccccccccCCCCC-ccCCccCCCceeccCCCeEEecccccccc
Confidence 45566553 222233 37999999999999999998888887754
No 118
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=46.85 E-value=7.5 Score=34.00 Aligned_cols=21 Identities=24% Similarity=0.703 Sum_probs=18.1
Q ss_pred CCceecCCCceeeeeCCCccc
Q 011244 425 ECKCKDTWGSYECSCGSGLLY 445 (490)
Q Consensus 425 ~~~c~nt~g~y~C~C~~~~~~ 445 (490)
...|.+++++|.|.|.+||.-
T Consensus 130 ~g~C~~~~~~~~c~C~~g~~g 150 (164)
T 3cfw_A 130 HGECVEIINNYTCNCDVGYYG 150 (164)
T ss_dssp SEEEEEETTEEEEEECTTCBS
T ss_pred CCeecccCCCceeeeCCCccc
Confidence 457999999999999999763
No 119
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=46.35 E-value=8.2 Score=27.68 Aligned_cols=24 Identities=25% Similarity=0.785 Sum_probs=18.1
Q ss_pred cCCCCCCceec----CCCceeeeeCCCcc
Q 011244 420 ACQCPECKCKD----TWGSYECSCGSGLL 444 (490)
Q Consensus 420 ~c~c~~~~c~n----t~g~y~C~C~~~~~ 444 (490)
+|+ .+..|.+ ..++|.|.|+.+|.
T Consensus 15 pC~-NGGtC~~~~~~~~~~y~C~C~~Gf~ 42 (52)
T 3ca7_A 15 YCL-NDAHCFAVKIADLPVYSCECAIGFM 42 (52)
T ss_dssp TSC-TTCEEEEEEETTEEEEEEECCTTEE
T ss_pred cCC-CCCEEecCccCCCCCEEEECCCCCc
Confidence 444 3457987 56799999999876
No 120
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=40.49 E-value=16 Score=27.18 Aligned_cols=29 Identities=34% Similarity=0.517 Sum_probs=21.0
Q ss_pred CCeEEecEEEEcCee-eeeccChhhHHHHh
Q 011244 366 GDVTILPTLVINNRQ-YRGKLDKGAVLKAI 394 (490)
Q Consensus 366 ~~~~~~Ptl~IN~~~-yrg~l~~~~vl~~i 394 (490)
.++..+|++++||+. +.|..+.+.+...|
T Consensus 52 ~~v~~~Pt~~~~G~~~~~G~~~~~~l~~~l 81 (85)
T 1fo5_A 52 YGIMAVPTIVINGDVEFIGAPTKEALVEAI 81 (85)
T ss_dssp TTTCCSSEEEETTEEECCSSSSSHHHHHHH
T ss_pred CCCcccCEEEECCEEeeecCCCHHHHHHHH
Confidence 346789999999986 77877766655443
No 121
>4f87_A Plycb; lysin, bacteriophage, antimicrobial protein, viral protein; 1.40A {Streptococcus phage C1} PDB: 4f88_A
Probab=39.45 E-value=16 Score=27.24 Aligned_cols=21 Identities=43% Similarity=0.469 Sum_probs=19.0
Q ss_pred cceeEEEEehhhHHHHHHHHh
Q 011244 146 ITIPSALISKSLGDSIKKSLS 166 (490)
Q Consensus 146 i~IPsv~Isk~~G~~L~~~l~ 166 (490)
--||++-|+++|-++|+++++
T Consensus 51 qiipsinisksdveairkamk 71 (72)
T 4f87_A 51 QIIPSINISKSDVEAIRKAMK 71 (72)
T ss_dssp TTSCEEECCGGGHHHHHHHHC
T ss_pred HhCccccccHhHHHHHHHHhc
Confidence 468999999999999999875
No 122
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=38.73 E-value=17 Score=27.04 Aligned_cols=28 Identities=21% Similarity=0.464 Sum_probs=20.8
Q ss_pred CeEEecEEEEcCee-eeeccChhhHHHHh
Q 011244 367 DVTILPTLVINNRQ-YRGKLDKGAVLKAI 394 (490)
Q Consensus 367 ~~~~~Ptl~IN~~~-yrg~l~~~~vl~~i 394 (490)
++..+||+++||+. +.|..+.+.+...|
T Consensus 52 ~v~~~Pt~~~~G~~~~~G~~~~~~l~~~l 80 (85)
T 1nho_A 52 GLMAVPAIAINGVVRFVGAPSREELFEAI 80 (85)
T ss_dssp CSSCSSEEEETTTEEEECSSCCHHHHHHH
T ss_pred CceeeCEEEECCEEEEccCCCHHHHHHHH
Confidence 46789999999986 77877776655443
No 123
>4b2v_A S64; toxin, ICK; NMR {Sicarius dolichocephalus}
Probab=34.02 E-value=17 Score=23.11 Aligned_cols=15 Identities=53% Similarity=1.504 Sum_probs=11.4
Q ss_pred cccccCCccccCCCCC
Q 011244 250 SQCINHGRYCAPDPEQ 265 (490)
Q Consensus 250 ~~Ci~~GrYCa~dP~~ 265 (490)
+.|+-+|.+| |||+.
T Consensus 1 secvenggfc-pdpek 15 (32)
T 4b2v_A 1 SECVENGGFC-PDPEK 15 (32)
T ss_dssp CCCCCTTCBC-CCTTT
T ss_pred CchhhcCCcC-CChHH
Confidence 3588899998 77864
No 124
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=33.38 E-value=25 Score=29.20 Aligned_cols=34 Identities=24% Similarity=0.464 Sum_probs=27.4
Q ss_pred cCCCCCCceec-CCCceeeeeCCCccceecCCeeeecC
Q 011244 420 ACQCPECKCKD-TWGSYECSCGSGLLYMQEHDTCISKD 456 (490)
Q Consensus 420 ~c~c~~~~c~n-t~g~y~C~C~~~~~~~~~~~tC~~~~ 456 (490)
.|+ +.+.|.+ ..|.++|.|..+|.- |+.+|+...
T Consensus 11 ~C~-~NA~C~r~~~g~e~C~C~~gy~g--dg~~Cv~~~ 45 (99)
T 1ob1_C 11 QCP-QNSGCFRHLDEREECKCLLNYKQ--EGDKCVENP 45 (99)
T ss_dssp CCC-TTEEEECCTTSCCEEEECTTEEE--ETTEEEECS
T ss_pred CCC-CCCCeEEcCCCCEEEEecCCeec--CCCeEeeCC
Confidence 555 6678988 589999999988874 889998864
No 125
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=30.13 E-value=6.2 Score=38.59 Aligned_cols=34 Identities=9% Similarity=-0.123 Sum_probs=27.3
Q ss_pred chhhHhhhccCCCCCCceecCCCceeeeeCCCccce
Q 011244 411 DVDECEEKLACQCPECKCKDTWGSYECSCGSGLLYM 446 (490)
Q Consensus 411 didEc~~~~~c~c~~~~c~nt~g~y~C~C~~~~~~~ 446 (490)
+++||... +|+ ....|+|.-++|+|.|+.+|.-.
T Consensus 98 ~~~eC~s~-pC~-ngG~C~~~~~sy~C~C~~Gf~G~ 131 (267)
T 4fbr_A 98 QNIVAVSI-KSN-DGGKTLTGTTTYNGEGPIGFKSE 131 (267)
T ss_dssp CCEEEEEE-ECS-STTSEEEEEEEETTSCCEEEEEE
T ss_pred cccccCCC-CCC-CCCEEecCCccEEeeCCCCcccc
Confidence 66788864 566 55789999999999999988753
No 126
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=27.66 E-value=29 Score=37.54 Aligned_cols=29 Identities=28% Similarity=0.544 Sum_probs=24.7
Q ss_pred ceecCC-CceeeeeCCCccceecCCeeeec
Q 011244 427 KCKDTW-GSYECSCGSGLLYMQEHDTCISK 455 (490)
Q Consensus 427 ~c~nt~-g~y~C~C~~~~~~~~~~~tC~~~ 455 (490)
-|..+. +++.|.|+.+|.+..|+.+|-+.
T Consensus 592 ~C~~~~~~~~~C~C~~g~~l~~d~~~~~~~ 621 (628)
T 4a0p_A 592 ICLVKGDGTTRCSCPMHLVLLQDELSCGGT 621 (628)
T ss_dssp EEEECTTSCEEEECCTTEEECTTSSCEEEC
T ss_pred hcccCCCCCeeeeCCCCCEECCCCCcCCCC
Confidence 587754 47999999999999999999764
No 127
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=26.71 E-value=27 Score=25.42 Aligned_cols=27 Identities=26% Similarity=0.500 Sum_probs=19.4
Q ss_pred eEEecEEEEcCee-eeecc-ChhhHHHHh
Q 011244 368 VTILPTLVINNRQ-YRGKL-DKGAVLKAI 394 (490)
Q Consensus 368 ~~~~Ptl~IN~~~-yrg~l-~~~~vl~~i 394 (490)
+...||+++||+. ++|.. +.+.+.+.+
T Consensus 48 v~~~Pt~~~~G~~~~~G~~~~~~~l~~~l 76 (77)
T 1ilo_A 48 LTALPGLAVDGELKIMGRVASKEEIKKIL 76 (77)
T ss_dssp CSSSSCEEETTEEEECSSCCCHHHHHHHC
T ss_pred CCcCCEEEECCEEEEcCCCCCHHHHHHHh
Confidence 5678999999986 66776 666665543
No 128
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=26.26 E-value=35 Score=28.58 Aligned_cols=34 Identities=18% Similarity=0.307 Sum_probs=27.0
Q ss_pred cCCCCCCceec-CCCceeeeeCCCccceecCCeeeecC
Q 011244 420 ACQCPECKCKD-TWGSYECSCGSGLLYMQEHDTCISKD 456 (490)
Q Consensus 420 ~c~c~~~~c~n-t~g~y~C~C~~~~~~~~~~~tC~~~~ 456 (490)
.|. +.+.|.+ ..|..+|.|..+|.- |+.+|+...
T Consensus 17 ~Cp-~NA~C~r~~~G~e~CrCl~gY~~--dg~~Cv~~N 51 (105)
T 1n1i_A 17 NVP-ENAACYRYLDGTEEWRCLLGFKE--VGGKCVPAS 51 (105)
T ss_dssp CCC-TTEEEEECTTSCEEEEECTTEEE--CSSSEEECC
T ss_pred CCC-CCCCeEECCCCCEeEEEECCeec--cCCEEEECC
Confidence 454 5578988 899999999988765 888998763
No 129
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=26.20 E-value=47 Score=28.85 Aligned_cols=31 Identities=26% Similarity=0.158 Sum_probs=24.5
Q ss_pred CCeEEecEEEE-cCeeeeeccChhhHHHHhhc
Q 011244 366 GDVTILPTLVI-NNRQYRGKLDKGAVLKAICA 396 (490)
Q Consensus 366 ~~~~~~Ptl~I-N~~~yrg~l~~~~vl~~iC~ 396 (490)
.+|...||++| ||+.+.|-.+.+.+..+|=.
T Consensus 105 ~gI~gtPt~vi~nG~~i~G~~~~~~l~~~i~~ 136 (147)
T 3gv1_A 105 FGFNGTPTLVFPNGRTQSGYSPMPQLEEIIRK 136 (147)
T ss_dssp TTCCSSCEEECTTSCEEESCCCTTHHHHHHHH
T ss_pred hCCCccCEEEEECCEEeeCCCCHHHHHHHHHH
Confidence 34788899999 89999999888777666533
No 130
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=23.59 E-value=37 Score=24.96 Aligned_cols=24 Identities=25% Similarity=0.796 Sum_probs=17.4
Q ss_pred cCCCCCCcee--c--CCCceeeeeCCCcc
Q 011244 420 ACQCPECKCK--D--TWGSYECSCGSGLL 444 (490)
Q Consensus 420 ~c~c~~~~c~--n--t~g~y~C~C~~~~~ 444 (490)
.|+ .+..|. + ..++|.|.|..||.
T Consensus 15 pC~-NGGtC~~~~~~~~~~~~C~C~~Gf~ 42 (58)
T 3ltf_D 15 YCL-NDAHCFAVKIADLPVYSCECAIGFM 42 (58)
T ss_dssp TSC-SSCEEEEEEETTEEEEEEEECTTEE
T ss_pred cCC-CCCEEeCCccCCCCCEEeECCCCCc
Confidence 455 445787 3 56689999999875
No 131
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=22.51 E-value=1.1e+02 Score=24.29 Aligned_cols=48 Identities=21% Similarity=0.379 Sum_probs=29.6
Q ss_pred HHHHHHhCCChhhcccccCCccCcccchHHHHHHHHHh-cCCCCCCeEEecEEEEcCeeeeec
Q 011244 323 EQVIKSLGVDLKKVDECVGDPEADVDNQVLKTEQDAQI-GKGSRGDVTILPTLVINNRQYRGK 384 (490)
Q Consensus 323 ~~v~~~l~id~~ki~~C~~d~~~d~~n~iL~~e~~~q~-~~~~~~~~~~~Ptl~IN~~~yrg~ 384 (490)
.+++++++++...++ ++ .++-+.+++.... + ...+|+++|||+..-|-
T Consensus 33 k~~L~~~~i~y~~id-------I~-~~~~~~~~l~~~~~g------~~~vP~ifi~g~~igG~ 81 (99)
T 3qmx_A 33 LALLKRKGVEFQEYC-------ID-GDNEAREAMAARANG------KRSLPQIFIDDQHIGGC 81 (99)
T ss_dssp HHHHHHHTCCCEEEE-------CT-TCHHHHHHHHHHTTT------CCCSCEEEETTEEEESH
T ss_pred HHHHHHCCCCCEEEE-------cC-CCHHHHHHHHHHhCC------CCCCCEEEECCEEEeCh
Confidence 567888888765543 12 2333444444443 3 36789999999887554
No 132
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=22.42 E-value=26 Score=25.90 Aligned_cols=25 Identities=20% Similarity=0.280 Sum_probs=17.9
Q ss_pred cchhHHHHHHHHHHHHhhhheeeEE
Q 011244 461 ASWGFVWMVILGLAATGVAGYAFYK 485 (490)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~y~~~~ 485 (490)
.-|.++..+++++.+.++.-|+.||
T Consensus 8 p~WiIi~svl~GLLLL~Lii~~LwK 32 (54)
T 2l8s_A 8 PLWVILLSAFAGLLLLMLLILALWK 32 (54)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3466666678888877777777776
No 133
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=21.59 E-value=1.2e+02 Score=24.05 Aligned_cols=49 Identities=16% Similarity=0.268 Sum_probs=29.8
Q ss_pred HHHHHHHhCCChhhcccccCCccCcccchHHHHHHHHHhcCCCCCCeEEecEEEEcCeeeeec
Q 011244 322 AEQVIKSLGVDLKKVDECVGDPEADVDNQVLKTEQDAQIGKGSRGDVTILPTLVINNRQYRGK 384 (490)
Q Consensus 322 ~~~v~~~l~id~~ki~~C~~d~~~d~~n~iL~~e~~~q~~~~~~~~~~~~Ptl~IN~~~yrg~ 384 (490)
...++++++++..+++ ++ .|+-+.+++....+ +..+|+++|||...-|-
T Consensus 38 ~~~~L~~~~i~~~~vd-------i~-~~~~~~~~l~~~~g------~~~vP~v~i~g~~igg~ 86 (105)
T 2yan_A 38 ILEILNSTGVEYETFD-------IL-EDEEVRQGLKAYSN------WPTYPQLYVKGELVGGL 86 (105)
T ss_dssp HHHHHHHHTCCCEEEE-------GG-GCHHHHHHHHHHHT------CCSSCEEEETTEEEECH
T ss_pred HHHHHHHCCCCeEEEE-------CC-CCHHHHHHHHHHHC------CCCCCeEEECCEEEeCh
Confidence 4567788887654442 12 23444444444433 35789999999887553
No 134
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=21.11 E-value=1.1e+02 Score=24.61 Aligned_cols=49 Identities=22% Similarity=0.349 Sum_probs=30.5
Q ss_pred HHHHHHHhCCChhhcccccCCccCcccchHHHHHHHHHhcCCCCCCeEEecEEEEcCeeeeec
Q 011244 322 AEQVIKSLGVDLKKVDECVGDPEADVDNQVLKTEQDAQIGKGSRGDVTILPTLVINNRQYRGK 384 (490)
Q Consensus 322 ~~~v~~~l~id~~ki~~C~~d~~~d~~n~iL~~e~~~q~~~~~~~~~~~~Ptl~IN~~~yrg~ 384 (490)
+.+++.+++++...++= + .++-+.+++....+. ..+|.++|||..+-|-
T Consensus 39 ak~~L~~~gi~~~~~dI-------~-~~~~~~~~l~~~~g~------~tvP~ifi~g~~iGG~ 87 (109)
T 3ipz_A 39 VVQILKNLNVPFEDVNI-------L-ENEMLRQGLKEYSNW------PTFPQLYIGGEFFGGC 87 (109)
T ss_dssp HHHHHHHTTCCCEEEEG-------G-GCHHHHHHHHHHHTC------SSSCEEEETTEEEECH
T ss_pred HHHHHHHcCCCcEEEEC-------C-CCHHHHHHHHHHHCC------CCCCeEEECCEEEeCH
Confidence 46788888887655431 1 233344444444343 4679999999887654
No 135
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=20.85 E-value=29 Score=25.62 Aligned_cols=25 Identities=24% Similarity=0.295 Sum_probs=17.4
Q ss_pred cchhHHHHHHHHHHHHhhhheeeEE
Q 011244 461 ASWGFVWMVILGLAATGVAGYAFYK 485 (490)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~y~~~~ 485 (490)
.-|.++..+++++.+.++.-|+.||
T Consensus 11 p~wiIi~svl~GLllL~li~~~LwK 35 (54)
T 2knc_A 11 PIWWVLVGVLGGLLLLTILVLAMWK 35 (54)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3466666677777777777777776
No 136
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=20.66 E-value=50 Score=38.72 Aligned_cols=37 Identities=32% Similarity=0.899 Sum_probs=24.7
Q ss_pred ccCCcchhhHhhhccCCCCCCceecCCCceeeeeCC-Ccc
Q 011244 406 ICLSEDVDECEEKLACQCPECKCKDTWGSYECSCGS-GLL 444 (490)
Q Consensus 406 ~C~~~didEc~~~~~c~c~~~~c~nt~g~y~C~C~~-~~~ 444 (490)
.|.....+.|.. .+|+ ....|.+.|++|.|.|+. +|.
T Consensus 613 gC~~~~~~~C~~-~pC~-ngg~C~~~~~~~~C~C~~~g~~ 650 (1245)
T 3qcw_A 613 SCSRETAKPCLS-NPCK-NNGMCRDGWNRYVCDCSGTGYL 650 (1245)
T ss_dssp SCCCCSSCGGGS-CCCC-TTCEEEECSSSEEEECTTTTEE
T ss_pred cccccCCCCCCc-cCCC-CCCEEeCCCCCeEEECCCCCcc
Confidence 454212456754 3666 445899999999999983 543
No 137
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=20.38 E-value=1.4e+02 Score=23.02 Aligned_cols=51 Identities=16% Similarity=0.250 Sum_probs=30.1
Q ss_pred HHHHHHHhCCChhhcccccCCccCcccchHHHHHHHHHhcCCCCCCeEEecEEEEcCeeeeec
Q 011244 322 AEQVIKSLGVDLKKVDECVGDPEADVDNQVLKTEQDAQIGKGSRGDVTILPTLVINNRQYRGK 384 (490)
Q Consensus 322 ~~~v~~~l~id~~ki~~C~~d~~~d~~n~iL~~e~~~q~~~~~~~~~~~~Ptl~IN~~~yrg~ 384 (490)
+.+++++.+++...++= + .++-+.+++....|.+ ...+|.|+|||...-|-
T Consensus 24 ak~~L~~~~i~~~~~di-------~-~~~~~~~~l~~~~g~~----~~~vP~ifi~g~~igG~ 74 (93)
T 1t1v_A 24 VTRILDGKRIQYQLVDI-------S-QDNALRDEMRTLAGNP----KATPPQIVNGNHYCGDY 74 (93)
T ss_dssp HHHHHHHTTCCCEEEET-------T-SCHHHHHHHHHHTTCT----TCCSCEEEETTEEEEEH
T ss_pred HHHHHHHCCCceEEEEC-------C-CCHHHHHHHHHHhCCC----CCCCCEEEECCEEEeCH
Confidence 45677888887554432 1 2233444555444421 35789999999876543
No 138
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=20.26 E-value=53 Score=32.21 Aligned_cols=28 Identities=36% Similarity=0.466 Sum_probs=24.2
Q ss_pred CeEEecEEEEcCeeeeeccChhhHHHHh
Q 011244 367 DVTILPTLVINNRQYRGKLDKGAVLKAI 394 (490)
Q Consensus 367 ~~~~~Ptl~IN~~~yrg~l~~~~vl~~i 394 (490)
++..+||+++||+.|.|..+.+++.+.+
T Consensus 248 gI~~vPT~~i~G~~~~G~~~~~~L~~~l 275 (291)
T 3kp9_A 248 GITSYPTWIINGRTYTGVRSLEALAVAS 275 (291)
T ss_dssp TCCSTTEEEETTEEEESCCCHHHHHHHT
T ss_pred CCcccCeEEECCEEecCCCCHHHHHHHH
Confidence 3678999999999999999988887765
Done!