BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011245
(490 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0CW06|DNAJ_METMZ Chaperone protein DnaJ OS=Methanosarcina mazei GN=dnaJ PE=3 SV=1
Length = 389
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 73 DWYAILQLARFTHSIELIATQYRKLALLLSPERNRFPFADRSFKLVYDAWSILSNPARKI 132
D+Y IL L++ + S+E I YRKLAL P+RN+ P A+ FK + +A+++LS+ ++
Sbjct: 6 DYYEILGLSKDS-SVEDIKKTYRKLALQYHPDRNKEPGAEEKFKEISEAYAVLSDAEKRA 64
Query: 133 MYD 135
YD
Sbjct: 65 QYD 67
>sp|P0CW07|DNAJ_METMA Chaperone protein DnaJ OS=Methanosarcina mazei (strain ATCC BAA-159
/ DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=dnaJ
PE=3 SV=1
Length = 389
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 73 DWYAILQLARFTHSIELIATQYRKLALLLSPERNRFPFADRSFKLVYDAWSILSNPARKI 132
D+Y IL L++ + S+E I YRKLAL P+RN+ P A+ FK + +A+++LS+ ++
Sbjct: 6 DYYEILGLSKDS-SVEDIKKTYRKLALQYHPDRNKEPGAEEKFKEISEAYAVLSDAEKRA 64
Query: 133 MYD 135
YD
Sbjct: 65 QYD 67
>sp|Q9UXR9|DNAJ_METTE Chaperone protein DnaJ OS=Methanosarcina thermophila GN=dnaJ PE=3
SV=1
Length = 387
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 73 DWYAILQLARFTHSIELIATQYRKLALLLSPERNRFPFADRSFKLVYDAWSILSNPARKI 132
D+Y IL L+R + E I YRKLAL P+RN+ P A+ FK + +A+++LS+P ++
Sbjct: 6 DYYEILGLSR-DATPEDIKKSYRKLALKYHPDRNKEPGAEEKFKEISEAYAVLSDPEKRA 64
Query: 133 MYD 135
YD
Sbjct: 65 QYD 67
>sp|P48353|HLJ1_YEAST Protein HLJ1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=HLJ1 PE=1 SV=1
Length = 224
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 7/82 (8%)
Query: 72 HDWYAILQLARFTHSIELIATQYRKLALLLSPERNRFPFADRSFKLVYDAWSILSNPARK 131
H++Y IL++ R E I YRKLA+ L P++N P A +FK++ A+ +LSN ++
Sbjct: 20 HEFYEILKVDRKATDSE-IKKAYRKLAIKLHPDKNSHPKAGEAFKVINRAFEVLSNEEKR 78
Query: 132 IMYDTDLQLSQLGERPRQTQMP 153
+YD ++G P QMP
Sbjct: 79 SIYD------RIGRDPDDRQMP 94
>sp|Q9QYI4|DJB12_MOUSE DnaJ homolog subfamily B member 12 OS=Mus musculus GN=Dnajb12 PE=2
SV=2
Length = 376
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 60 ESIIITSNGNQYHDWYAILQLARFTHSIELIATQYRKLALLLSPERNRFPFADRSFKLVY 119
E + Q D+Y IL ++R + S E + YRKLAL P++N P A +FK +
Sbjct: 98 EQVAAVKRVKQCKDYYEILGVSR-SASDEDLKKAYRKLALKFHPDKNHAPGATEAFKAIG 156
Query: 120 DAWSILSNPARKIMYD 135
A+++LSNP ++ YD
Sbjct: 157 TAYAVLSNPEKRKQYD 172
>sp|O13633|YNF5_SCHPO Uncharacterized J domain-containing protein C17A3.05c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pi041 PE=1 SV=1
Length = 403
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 72 HDWYAILQLARFTHSIELIATQYRKLALLLSPERNRFPFADRSFKLVYDAWSILSNPARK 131
H +Y IL L + E I Y+KLAL L P++N P AD +FK+V A+ +LS+P +
Sbjct: 112 HQYYEILDLKKTCTDTE-IKKSYKKLALQLHPDKNHAPSADEAFKMVSKAFQVLSDPNLR 170
Query: 132 IMYD 135
YD
Sbjct: 171 AHYD 174
>sp|Q58DR2|DJB12_BOVIN DnaJ homolog subfamily B member 12 OS=Bos taurus GN=DNAJB12 PE=2
SV=1
Length = 370
Score = 52.4 bits (124), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 60 ESIIITSNGNQYHDWYAILQLARFTHSIELIATQYRKLALLLSPERNRFPFADRSFKLVY 119
E + Q D+Y IL ++R S E + YRKLAL P++N P A +FK +
Sbjct: 97 EQVAAVKRVKQCKDYYEILGVSRGA-SDEDLKKAYRKLALKFHPDKNHAPGATEAFKAIG 155
Query: 120 DAWSILSNPARKIMYD 135
A+++LSNP ++ YD
Sbjct: 156 TAYAVLSNPEKRKQYD 171
>sp|Q8TQR1|DNAJ_METAC Chaperone protein DnaJ OS=Methanosarcina acetivorans (strain ATCC
35395 / DSM 2834 / JCM 12185 / C2A) GN=dnaJ PE=3 SV=1
Length = 382
Score = 52.4 bits (124), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 73 DWYAILQLARFTHSIELIATQYRKLALLLSPERNRFPFADRSFKLVYDAWSILSNPARKI 132
D+Y IL L + S+E I YRKLAL P+RN+ P A+ FK + +A+++LS+ ++
Sbjct: 6 DYYEILGLPK-DASVEDIKKTYRKLALQYHPDRNKDPGAEDKFKEISEAYAVLSDTEKRA 64
Query: 133 MYD 135
YD
Sbjct: 65 QYD 67
>sp|Q9NXW2|DJB12_HUMAN DnaJ homolog subfamily B member 12 OS=Homo sapiens GN=DNAJB12 PE=1
SV=4
Length = 375
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 60 ESIIITSNGNQYHDWYAILQLARFTHSIELIATQYRKLALLLSPERNRFPFADRSFKLVY 119
E + Q D+Y IL ++R S E + YR+LAL P++N P A +FK +
Sbjct: 97 EQVAAVKRVKQCKDYYEILGVSRGA-SDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIG 155
Query: 120 DAWSILSNPARKIMYD 135
A+++LSNP ++ YD
Sbjct: 156 TAYAVLSNPEKRKQYD 171
>sp|Q9RUG2|DNAJ_DEIRA Chaperone protein DnaJ OS=Deinococcus radiodurans (strain ATCC
13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 /
NCIMB 9279 / R1 / VKM B-1422) GN=dnaJ PE=3 SV=2
Length = 376
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 73 DWYAILQLARFTHSIELIATQYRKLALLLSPERNRFPFADRSFKLVYDAWSILSNPARKI 132
D+Y +L ++R T S + I + YRKLAL L P+RN+ A F V +A+S+LS+ ++
Sbjct: 2 DYYELLGVSR-TASADEIKSAYRKLALKLHPDRNKEEGAAEKFAQVSEAYSVLSDTEKRA 60
Query: 133 MYD 135
YD
Sbjct: 61 HYD 63
>sp|Q9FH28|DNJ49_ARATH Chaperone protein dnaJ 49 OS=Arabidopsis thaliana GN=ATJ49 PE=2
SV=2
Length = 354
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 31/159 (19%)
Query: 6 NRAEAERWLSVAEKVLSSHDFQGARSFAIRAREYDPSFEAPNQVLAVADTI--------- 56
N+ +A R L +AE + S D + A F A+ +PS + ++++A D +
Sbjct: 4 NKDDASRCLRIAEDAIVSGDKERALKFINMAKRLNPSL-SVDELVAACDNLDSVSRNSSV 62
Query: 57 --------------------IAGESIIITSNGNQYHDWYAILQLARFTHSIELIATQYRK 96
E++ + N + +D+YAIL L + S++ I YRK
Sbjct: 63 SEKLKTMDGDDDKLETGKMKYTEENVDLVRNIIRNNDYYAILGLEK-NCSVDEIRKAYRK 121
Query: 97 LALLLSPERNRFPFADRSFKLVYDAWSILSNPARKIMYD 135
L+L + P++N+ P ++ +FK V A++ LS+ + +D
Sbjct: 122 LSLKVHPDKNKAPGSEEAFKKVSKAFTCLSDGNSRRQFD 160
>sp|Q7ZXQ8|DJB14_XENLA DnaJ homolog subfamily B member 14 OS=Xenopus laevis GN=dnajb14
PE=2 SV=1
Length = 371
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 68/160 (42%), Gaps = 30/160 (18%)
Query: 6 NRAEAERWLSVAEKVLSSHDFQGARSFAIRAREYDPSFEAPNQVLAVADTIIAG------ 59
NR EAER + + + + + D + AR F +A PS EA + A+ AG
Sbjct: 4 NRDEAERCVRIGKAAIEAGDKEKARRFFSKAERLYPSSEARVLLDALEKNDTAGNGPQSE 63
Query: 60 -------------ESIIITSNGNQYHDWYAILQLARFTHSIELIATQ-----------YR 95
+S T G+ + ++ + E++ YR
Sbjct: 64 KMSKSTEQPKAEKDSSGDTGKGHTQDQVDGVQRIKKCKTYYEVLGVSPDAGEEDLKKAYR 123
Query: 96 KLALLLSPERNRFPFADRSFKLVYDAWSILSNPARKIMYD 135
KLAL P++N P A +FK + +A+++LSNP ++ YD
Sbjct: 124 KLALKFHPDKNHAPGATEAFKKIGNAYAVLSNPEKRKQYD 163
>sp|A6Q486|DNAJ_NITSB Chaperone protein DnaJ OS=Nitratiruptor sp. (strain SB155-2)
GN=dnaJ PE=3 SV=1
Length = 373
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 73 DWYAILQLARFTHSIELIATQYRKLALLLSPERN-RFPFADRSFKLVYDAWSILSNPARK 131
D+Y +L++ R S E I YRKLAL P+RN P A+ FKL+ +A+ +LS+ ++
Sbjct: 5 DYYELLEVDR-NASFEEIKKAYRKLALKYHPDRNPDNPEAEEKFKLINEAYQVLSDEEKR 63
Query: 132 IMYD 135
+YD
Sbjct: 64 ALYD 67
>sp|Q5R8J8|DNJB4_PONAB DnaJ homolog subfamily B member 4 OS=Pongo abelii GN=DNAJB4 PE=2
SV=1
Length = 337
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 7/73 (9%)
Query: 73 DWYAILQLARFTHSIELIATQYRKLALLLSPERNRFPFADRSFKLVYDAWSILSNPARKI 132
D+Y IL + + S E I YRK AL P++N+ P A+ FK V +A+ +LS+P ++
Sbjct: 4 DYYCILGIEK-GASDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKKRE 62
Query: 133 MYDTDLQLSQLGE 145
+YD Q GE
Sbjct: 63 IYD------QFGE 69
>sp|Q9UDY4|DNJB4_HUMAN DnaJ homolog subfamily B member 4 OS=Homo sapiens GN=DNAJB4 PE=1
SV=1
Length = 337
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 7/73 (9%)
Query: 73 DWYAILQLARFTHSIELIATQYRKLALLLSPERNRFPFADRSFKLVYDAWSILSNPARKI 132
D+Y IL + + S E I YRK AL P++N+ P A+ FK V +A+ +LS+P ++
Sbjct: 4 DYYCILGIEK-GASDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKKRE 62
Query: 133 MYDTDLQLSQLGE 145
+YD Q GE
Sbjct: 63 IYD------QFGE 69
>sp|Q5EA26|DJC18_BOVIN DnaJ homolog subfamily C member 18 OS=Bos taurus GN=DNAJC18 PE=2
SV=1
Length = 358
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 73 DWYAILQLARFTHSIELIATQYRKLALLLSPERNRFPFADRSFKLVYDAWSILSNPARKI 132
++Y IL ++R S E + YRKLAL P++N P A +FK + +A+++LSNP +++
Sbjct: 82 NYYEILGVSR-DASDEELKKAYRKLALKFHPDKNCAPGATDAFKAIGNAFAVLSNPDKRL 140
Query: 133 MYD 135
YD
Sbjct: 141 RYD 143
>sp|Q28I38|DJB14_XENTR DnaJ homolog subfamily B member 14 OS=Xenopus tropicalis GN=dnajb14
PE=2 SV=1
Length = 375
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 70/165 (42%), Gaps = 36/165 (21%)
Query: 6 NRAEAERWLSVAEKVLSSHDFQGARSFAIRAREYDPSFEAPNQVLAVADTIIAG------ 59
NR EAER + +A+ + + D + A+ F +A PS EA + A AG
Sbjct: 4 NRDEAERCVRIAKAAIEAGDKEKAKRFLSKAERLYPSSEARALLQAFEKNDTAGNGPQSA 63
Query: 60 --------------ESIIITSNGNQYHD---------------WYAILQLARFTHSIELI 90
+ +S+ + H +Y +L ++ E +
Sbjct: 64 KMAKGTEQPKAEKDSNASASSDTGKGHTQDQLDGVQRIKKCKTYYEVLGVST-DAGEEDL 122
Query: 91 ATQYRKLALLLSPERNRFPFADRSFKLVYDAWSILSNPARKIMYD 135
YRKLAL P++N P A +FK + +A+++LSNP ++ YD
Sbjct: 123 KKAYRKLALKFHPDKNHAPGATEAFKKIGNAYAVLSNPEKRKQYD 167
>sp|Q2KIT4|DNJB4_BOVIN DnaJ homolog subfamily B member 4 OS=Bos taurus GN=DNAJB4 PE=2 SV=1
Length = 337
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 7/73 (9%)
Query: 73 DWYAILQLARFTHSIELIATQYRKLALLLSPERNRFPFADRSFKLVYDAWSILSNPARKI 132
D+Y IL + + S E I YRK AL P++N+ P A+ FK V +A+ +LS+P ++
Sbjct: 4 DYYCILGIEK-GASDEDIKKAYRKQALRFHPDKNKSPQAEERFKEVAEAYEVLSDPKKRE 62
Query: 133 MYDTDLQLSQLGE 145
+YD Q GE
Sbjct: 63 IYD------QFGE 69
>sp|Q95KD5|DJC18_MACFA DnaJ homolog subfamily C member 18 OS=Macaca fascicularis
GN=DNAJC18 PE=2 SV=1
Length = 358
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 55 TIIAGESIIITSNGNQYHDWYAILQLARFTHSIELIATQYRKLALLLSPERNRFPFADRS 114
++ + E ++ + ++Y IL ++R S E + YRKLAL P++N P A +
Sbjct: 64 SMYSEEQLLGVQRIKKCRNYYEILGVSR-DASDEELKKAYRKLALKFHPDKNCAPGATDA 122
Query: 115 FKLVYDAWSILSNPARKIMYD 135
FK + +A+++LSNP +++ YD
Sbjct: 123 FKAIGNAFAVLSNPDKRLRYD 143
>sp|Q9H819|DJC18_HUMAN DnaJ homolog subfamily C member 18 OS=Homo sapiens GN=DNAJC18 PE=2
SV=1
Length = 358
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 73 DWYAILQLARFTHSIELIATQYRKLALLLSPERNRFPFADRSFKLVYDAWSILSNPARKI 132
++Y IL ++R S E + YRKLAL P++N P A +FK + +A+++LSNP +++
Sbjct: 82 NYYEILGVSR-DASDEELKKAYRKLALKFHPDKNCAPGATDAFKAIGNAFAVLSNPDKRL 140
Query: 133 MYD 135
YD
Sbjct: 141 RYD 143
>sp|Q7NBW0|DNAJ_MYCGA Chaperone protein DnaJ OS=Mycoplasma gallisepticum (strain R(low /
passage 15 / clone 2)) GN=dnaJ PE=3 SV=2
Length = 391
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 73 DWYAILQLARFTHSIELIATQYRKLALLLSPERNRFPFADRSFKLVYDAWSILSNPARKI 132
D+Y IL+++R + + + I +RKLA+ P+RN+ A+ FK V +A+ +LS+ ++
Sbjct: 6 DYYEILEVSR-SATQQDIKKAFRKLAMKYHPDRNKDSDAEEKFKEVNEAYEVLSDEEKRK 64
Query: 133 MYDT 136
+YDT
Sbjct: 65 LYDT 68
>sp|Q8TBM8|DJB14_HUMAN DnaJ homolog subfamily B member 14 OS=Homo sapiens GN=DNAJB14 PE=2
SV=1
Length = 379
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 69 NQYHDWYAILQLARFTHSIELIATQYRKLALLLSPERNRFPFADRSFKLVYDAWSILSNP 128
N+ ++Y +L + + E + YRKLAL P++N P A +FK + +A+++LSNP
Sbjct: 104 NKCKNYYEVLGVTKDAGD-EDLKKAYRKLALKFHPDKNHAPGATDAFKKIGNAYAVLSNP 162
Query: 129 ARKIMYD 135
++ YD
Sbjct: 163 EKRKQYD 169
>sp|Q5U458|DJC11_MOUSE DnaJ homolog subfamily C member 11 OS=Mus musculus GN=Dnajc11 PE=2
SV=2
Length = 559
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 5/67 (7%)
Query: 73 DWYAILQLARFTHSIELIATQYRKLALLLSPERNRFP----FADRSFKLVYDAWSILSNP 128
D+Y++L + R S EL A YR+L +L P+++R P A+R F LV+ A+ +LS+P
Sbjct: 14 DYYSLLNVRREASSEELKAA-YRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYEVLSDP 72
Query: 129 ARKIMYD 135
+ +YD
Sbjct: 73 QTRAIYD 79
>sp|Q5XIX0|DJC14_RAT DnaJ homolog subfamily C member 14 OS=Rattus norvegicus GN=Dnajc14
PE=1 SV=1
Length = 703
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 75 YAILQLARFTHSIELIATQYRKLALLLSPERNRFPFADRSFKLVYDAWSILSNPARKIMY 134
+ +L + IEL YR+LA+++ P++N P A+ +FK++ AW I+SNP R+ Y
Sbjct: 446 FHVLGVEATASDIEL-KKAYRQLAVMVHPDKNHHPRAEEAFKVLRAAWDIVSNPERRKEY 504
Query: 135 D 135
+
Sbjct: 505 E 505
>sp|Q9NVH1|DJC11_HUMAN DnaJ homolog subfamily C member 11 OS=Homo sapiens GN=DNAJC11 PE=1
SV=2
Length = 559
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 5/67 (7%)
Query: 73 DWYAILQLARFTHSIELIATQYRKLALLLSPERNRFP----FADRSFKLVYDAWSILSNP 128
D+Y++L + R S EL A YR+L +L P+++R P A+R F LV+ A+ +LS+P
Sbjct: 14 DYYSLLNVRREASSEELKAA-YRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYEVLSDP 72
Query: 129 ARKIMYD 135
+ +YD
Sbjct: 73 QTRAIYD 79
>sp|Q5RC70|DJC11_PONAB DnaJ homolog subfamily C member 11 OS=Pongo abelii GN=DNAJC11 PE=2
SV=1
Length = 559
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 5/67 (7%)
Query: 73 DWYAILQLARFTHSIELIATQYRKLALLLSPERNRFP----FADRSFKLVYDAWSILSNP 128
D+Y++L + R S EL A YR+L +L P+++R P A+R F LV+ A+ +LS+P
Sbjct: 14 DYYSLLNVRREASSEELKAA-YRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYEVLSDP 72
Query: 129 ARKIMYD 135
+ +YD
Sbjct: 73 QTRAIYD 79
>sp|B9KFK6|DNAJ_CAMLR Chaperone protein DnaJ OS=Campylobacter lari (strain RM2100 / D67 /
ATCC BAA-1060) GN=dnaJ PE=3 SV=1
Length = 373
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 73 DWYAILQLARFTHSIELIATQYRKLALLLSPERNRF-PFADRSFKLVYDAWSILSNPARK 131
++Y IL++++ T E I YRK+AL P+RN+ A+ FKLV +A+ +LSN ++
Sbjct: 4 NYYEILEISQ-TSDKETIKKAYRKMALKYHPDRNQGDKEAEEKFKLVNEAYEVLSNDEKR 62
Query: 132 IMYD 135
+YD
Sbjct: 63 SIYD 66
>sp|Q95J56|DJC14_BOVIN DnaJ homolog subfamily C member 14 OS=Bos taurus GN=DNAJC14 PE=1
SV=1
Length = 699
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 75 YAILQLARFTHSIELIATQYRKLALLLSPERNRFPFADRSFKLVYDAWSILSNPARKIMY 134
+ +L + +EL YR+LA+++ P++N P A+ +FK++ AW I+SNP R+ Y
Sbjct: 446 FHVLGVEATASDVEL-KKAYRQLAVMVHPDKNHHPRAEEAFKVLRAAWDIVSNPERRKEY 504
Query: 135 D 135
+
Sbjct: 505 E 505
>sp|Q149L6|DJB14_MOUSE DnaJ homolog subfamily B member 14 OS=Mus musculus GN=Dnajb14 PE=2
SV=1
Length = 379
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 69 NQYHDWYAILQLARFTHSIELIATQYRKLALLLSPERNRFPFADRSFKLVYDAWSILSNP 128
N+ ++Y +L + + E + YRKLAL P++N P A +FK + +A+++LSNP
Sbjct: 104 NKCKNYYEVLGVTKDAGD-EDLKKAYRKLALKFHPDKNHAPGATDAFKKIGNAYAVLSNP 162
Query: 129 ARKIMYD 135
++ YD
Sbjct: 163 EKRKQYD 169
>sp|P0CB24|Y4865_ARATH Uncharacterized protein At4g38065 OS=Arabidopsis thaliana
GN=At4g38065 PE=2 SV=1
Length = 191
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 13/127 (10%)
Query: 14 LSVAEKVLSSHDFQGARSFA-----IRAREYDPSFEAPNQVLAVADTIIAGESIIITSNG 68
+ K+L S +F R ++++ +D + QV A+ D +IA E+ +
Sbjct: 19 IETCRKLLKSREFLSVRYIIQVNQLLKSKRHDDD-DQFEQVEAICDLLIAAENRL----P 73
Query: 69 NQYHDWYAILQLARFTHSIELIATQYRKLALLLSPERNRFPFADRSFKLVYDAWSILSNP 128
N D+Y +++ RF ++ + KL LL + N FPF+ + AWS+LS P
Sbjct: 74 NGLKDYYGMIRANRFG---PVLLEDFEKLTKLLDKKHNYFPFSQEAADKASLAWSLLSKP 130
Query: 129 ARKIMYD 135
K YD
Sbjct: 131 PIKAHYD 137
>sp|Q835R5|DNAJ_ENTFA Chaperone protein DnaJ OS=Enterococcus faecalis (strain ATCC 700802
/ V583) GN=dnaJ PE=3 SV=1
Length = 389
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 73 DWYAILQLARFTHSIELIATQYRKLALLLSPERNRFPFADRSFKLVYDAWSILSNPARKI 132
D+Y +L LA+ E I YRKL+ P+ N+ A+ FK V +A+ +LS+P +K
Sbjct: 6 DYYEVLGLAKGASDDE-IKKAYRKLSKKYHPDINKEADAEEKFKEVSEAYEVLSDPQKKA 64
Query: 133 MYDTDLQLSQLGERP 147
YD Q G P
Sbjct: 65 AYD---QYGHAGTDP 76
>sp|Q0IIE8|DJB14_BOVIN DnaJ homolog subfamily B member 14 OS=Bos taurus GN=DNAJB14 PE=2
SV=1
Length = 379
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 69 NQYHDWYAILQLARFTHSIELIATQYRKLALLLSPERNRFPFADRSFKLVYDAWSILSNP 128
N+ ++Y +L + + E + YRKLAL P++N P A +FK + +A+++LSNP
Sbjct: 104 NKCKNYYEVLGVTKDAGD-EDLKKAYRKLALKFHPDKNHAPGATDAFKKIGNAYAVLSNP 162
Query: 129 ARKIMYD 135
++ YD
Sbjct: 163 EKRKQYD 169
>sp|Q3MI00|DNJB1_BOVIN DnaJ homolog subfamily B member 1 OS=Bos taurus GN=DNAJB1 PE=2 SV=3
Length = 340
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 73 DWYAILQLARFTHSIELIATQYRKLALLLSPERNRFPFADRSFKLVYDAWSILSNPARKI 132
D+Y L LAR S E I YR+ AL P++N+ P A+ FK + +A+ +LS+P ++
Sbjct: 4 DYYQTLGLAR-GASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKRE 62
Query: 133 MYD 135
++D
Sbjct: 63 IFD 65
>sp|P25685|DNJB1_HUMAN DnaJ homolog subfamily B member 1 OS=Homo sapiens GN=DNAJB1 PE=1
SV=4
Length = 340
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 73 DWYAILQLARFTHSIELIATQYRKLALLLSPERNRFPFADRSFKLVYDAWSILSNPARKI 132
D+Y L LAR S E I YR+ AL P++N+ P A+ FK + +A+ +LS+P ++
Sbjct: 4 DYYQTLGLAR-GASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKRE 62
Query: 133 MYD 135
++D
Sbjct: 63 IFD 65
>sp|Q56237|DNAJ2_THET8 Chaperone protein DnaJ 2 OS=Thermus thermophilus (strain HB8 / ATCC
27634 / DSM 579) GN=dnaJ2 PE=3 SV=2
Length = 280
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 73 DWYAILQLARFTHSIELIATQYRKLALLLSPERNRFPFADRSFKLVYDAWSILSNPARKI 132
D+YAIL + R + E I Y++LA P+ N+ P A+ FK + +A+++LS+P ++
Sbjct: 6 DYYAILGVPR-NATQEEIKRAYKRLARQYHPDVNKSPEAEEKFKEINEAYAVLSDPEKRR 64
Query: 133 MYDT 136
+YDT
Sbjct: 65 IYDT 68
>sp|Q5WHG0|DNAJ_BACSK Chaperone protein DnaJ OS=Bacillus clausii (strain KSM-K16) GN=dnaJ
PE=3 SV=1
Length = 372
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 73 DWYAILQLARFTHSIELIATQYRKLALLLSPERNRFPFADRSFKLVYDAWSILSNPARKI 132
D+Y +L + R S+E + YRKLA P+ N+ A+ FK V +A+ LS+P +K
Sbjct: 5 DYYEVLGVDR-NASVEEVKKAYRKLARKYHPDVNKEEDAEAKFKEVKEAYDTLSDPQKKA 63
Query: 133 MYD 135
YD
Sbjct: 64 RYD 66
>sp|Q921R4|DJC14_MOUSE DnaJ homolog subfamily C member 14 OS=Mus musculus GN=Dnajc14 PE=2
SV=2
Length = 703
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 31/42 (73%)
Query: 94 YRKLALLLSPERNRFPFADRSFKLVYDAWSILSNPARKIMYD 135
YR+LA+++ P++N P A+ +FK++ AW I+SNP R+ Y+
Sbjct: 464 YRQLAVMVHPDKNHHPRAEEAFKILRAAWDIVSNPERRKEYE 505
>sp|B1HUD0|DNAJ_LYSSC Chaperone protein DnaJ OS=Lysinibacillus sphaericus (strain C3-41)
GN=dnaJ PE=3 SV=1
Length = 372
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 73 DWYAILQLARFTHSIELIATQYRKLALLLSPERNRFPFADRSFKLVYDAWSILSNPARKI 132
D+Y +L L + + + + I YRKL+ P+ N+ P AD FK + +A+ +LS+ +K
Sbjct: 5 DYYEVLGLTK-SATKDEIKKAYRKLSKQYHPDLNKEPGADEKFKEIAEAYEVLSDDQKKA 63
Query: 133 MYD 135
YD
Sbjct: 64 RYD 66
>sp|Q9D832|DNJB4_MOUSE DnaJ homolog subfamily B member 4 OS=Mus musculus GN=Dnajb4 PE=2
SV=1
Length = 337
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 7/73 (9%)
Query: 73 DWYAILQLARFTHSIELIATQYRKLALLLSPERNRFPFADRSFKLVYDAWSILSNPARKI 132
D+Y IL + + + E + YRK AL P++N+ P A+ FK V +A+ +LS+P ++
Sbjct: 4 DYYHILGIDK-GATDEDVKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKKRE 62
Query: 133 MYDTDLQLSQLGE 145
+YD Q GE
Sbjct: 63 IYD------QFGE 69
>sp|C0ZB49|DNAJ_BREBN Chaperone protein DnaJ OS=Brevibacillus brevis (strain 47 / JCM
6285 / NBRC 100599) GN=dnaJ PE=3 SV=1
Length = 375
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 73 DWYAILQLARFTHSIELIATQYRKLALLLSPERNRFPFADRSFKLVYDAWSILSNPARKI 132
D Y +L +A+ + E I YRKLA P+ N+ A+ FK V DA+ ILS P ++
Sbjct: 4 DLYEVLGVAKDADADE-IKKAYRKLARQYHPDVNKEADAEEKFKEVKDAYDILSEPQKRA 62
Query: 133 MYD 135
YD
Sbjct: 63 QYD 65
>sp|O89114|DNJB5_MOUSE DnaJ homolog subfamily B member 5 OS=Mus musculus GN=Dnajb5 PE=2
SV=1
Length = 348
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 73 DWYAILQLARFTHSIELIATQYRKLALLLSPERNRFPFADRSFKLVYDAWSILSNPARKI 132
D+Y IL + + E I YRK+AL P++N+ P A+ FK + +A+ +LS+P ++
Sbjct: 4 DYYKILGIPSGANEDE-IKKAYRKMALKYHPDKNKEPNAEEKFKEIAEAYDVLSDPKKRS 62
Query: 133 MYD 135
+YD
Sbjct: 63 LYD 65
>sp|Q7VG06|DNAJ_HELHP Chaperone protein DnaJ OS=Helicobacter hepaticus (strain ATCC 51449
/ 3B1) GN=dnaJ PE=3 SV=1
Length = 385
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 73 DWYAILQLARFTHSIELIATQYRKLALLLSPERN-RFPFADRSFKLVYDAWSILSNPARK 131
D+Y IL++ R T E I YRK+AL P+RN A+ FK V +A+ +LS+ +++
Sbjct: 5 DYYEILEITR-TSDKETIKKAYRKMALKYHPDRNPDDKDAEEQFKRVNEAYEVLSDDSKR 63
Query: 132 IMYD 135
+YD
Sbjct: 64 QIYD 67
>sp|Q9KD71|DNAJ_BACHD Chaperone protein DnaJ OS=Bacillus halodurans (strain ATCC BAA-125
/ DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=dnaJ PE=3
SV=1
Length = 370
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 73 DWYAILQLARFTHSIELIATQYRKLALLLSPERNRFPFADRSFKLVYDAWSILSNPARKI 132
D+Y +L + R S + + YRKLA P+ N+ P A+ FK V +A+ LS+P +K
Sbjct: 5 DYYEVLGVDR-NASADEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAFDTLSDPQKKA 63
Query: 133 MYD 135
YD
Sbjct: 64 HYD 66
>sp|Q5BIP8|DNJB5_BOVIN DnaJ homolog subfamily B member 5 OS=Bos taurus GN=DNAJB5 PE=2 SV=1
Length = 348
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 73 DWYAILQLARFTHSIELIATQYRKLALLLSPERNRFPFADRSFKLVYDAWSILSNPARKI 132
D+Y IL + + E I YRK+AL P++N+ P A+ FK + +A+ +LS+P ++
Sbjct: 4 DYYKILGIPSGANEDE-IKKAYRKMALKYHPDKNKEPNAEEKFKEIAEAYDVLSDPKKRG 62
Query: 133 MYD 135
+YD
Sbjct: 63 LYD 65
>sp|O75953|DNJB5_HUMAN DnaJ homolog subfamily B member 5 OS=Homo sapiens GN=DNAJB5 PE=1
SV=1
Length = 348
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 73 DWYAILQLARFTHSIELIATQYRKLALLLSPERNRFPFADRSFKLVYDAWSILSNPARKI 132
D+Y IL + + E I YRK+AL P++N+ P A+ FK + +A+ +LS+P ++
Sbjct: 4 DYYKILGIPSGANEDE-IKKAYRKMALKYHPDKNKEPNAEEKFKEIAEAYDVLSDPKKRG 62
Query: 133 MYD 135
+YD
Sbjct: 63 LYD 65
>sp|Q5R6H3|DJB14_PONAB DnaJ homolog subfamily B member 14 OS=Pongo abelii GN=DNAJB14 PE=2
SV=1
Length = 379
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 69 NQYHDWYAILQLARFTHSIELIATQYRKLALLLSPERNRFPFADRSFKLVYDAWSILSNP 128
N+ + Y +L + + E + YRKLAL P++N P A +FK + +A+++LSNP
Sbjct: 104 NKCKNCYEVLGVTK-DAGDEDLKKAYRKLALKFHPDKNHAPGATDAFKKIGNAYAVLSNP 162
Query: 129 ARKIMYD 135
++ YD
Sbjct: 163 EKRKQYD 169
>sp|Q24133|DNAJ1_DROME DnaJ protein homolog 1 OS=Drosophila melanogaster GN=DnaJ-1 PE=1
SV=3
Length = 334
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 73 DWYAILQLARFTHSIELIATQYRKLALLLSPERNRFPFADRSFKLVYDAWSILSNPARKI 132
D+Y IL L R S + I YRKLAL P++N+ P A+ FK + +A+ +LS+ ++
Sbjct: 4 DFYKILGLER-KASDDEIKKAYRKLALKYHPDKNKSPQAEERFKEIAEAYEVLSDKKKRD 62
Query: 133 MYD 135
++D
Sbjct: 63 IFD 65
>sp|Q9Z9E9|DNAJ_CHLPN Chaperone protein DnaJ OS=Chlamydia pneumoniae GN=dnaJ PE=3 SV=1
Length = 392
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 73 DWYAILQLARFTHSIELIATQYRKLALLLSPERN-RFPFADRSFKLVYDAWSILSNPARK 131
D+Y+IL +++ T S E I YRKLA+ P++N A++ FK V +A+ +LS+P ++
Sbjct: 2 DYYSILGISK-TASAEEIKKAYRKLAVKYHPDKNPGDAAAEKRFKEVSEAYEVLSDPQKR 60
Query: 132 IMYD 135
YD
Sbjct: 61 DSYD 64
>sp|Q9QYJ3|DNJB1_MOUSE DnaJ homolog subfamily B member 1 OS=Mus musculus GN=Dnajb1 PE=2
SV=3
Length = 340
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 73 DWYAILQLARFTHSIELIATQYRKLALLLSPERNRFPFADRSFKLVYDAWSILSNPARKI 132
D+Y L LAR E I YR+ AL P++N+ P A+ FK + +A+ +LS+P ++
Sbjct: 4 DYYQTLGLARGASDDE-IKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKRE 62
Query: 133 MYD 135
++D
Sbjct: 63 IFD 65
>sp|A6QBG7|DNAJ_SULNB Chaperone protein DnaJ OS=Sulfurovum sp. (strain NBC37-1) GN=dnaJ
PE=3 SV=1
Length = 377
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 73 DWYAILQLARFTHSIELIATQYRKLALLLSPERN-RFPFADRSFKLVYDAWSILSNPARK 131
D+Y +L+++R EL YRKLAL P+RN A+ FK+V +A+ +LS+ ++
Sbjct: 5 DYYEVLEVSRDCSGAEL-KKAYRKLALKYHPDRNPDDQEAEEKFKIVNEAYQVLSDDEKR 63
Query: 132 IMYD 135
+YD
Sbjct: 64 TIYD 67
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.131 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 199,468,181
Number of Sequences: 539616
Number of extensions: 9303030
Number of successful extensions: 74495
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 1232
Number of HSP's that attempted gapping in prelim test: 54421
Number of HSP's gapped (non-prelim): 14159
length of query: 490
length of database: 191,569,459
effective HSP length: 122
effective length of query: 368
effective length of database: 125,736,307
effective search space: 46270960976
effective search space used: 46270960976
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)